Query         010230
Match_columns 514
No_of_seqs    279 out of 2036
Neff          8.4 
Searched_HMMs 13730
Date          Mon Mar 25 22:43:35 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010230.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/010230hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d3psga_ b.50.1.2 (A:) Pepsin(o 100.0 4.3E-64 3.1E-68  515.6  36.9  370   30-514     1-370 (370)
  2 g1htr.1 b.50.1.2 (P:,B:) Pepsi 100.0 2.4E-63 1.8E-67  510.2  35.4  371   29-514     1-372 (372)
  3 d1dpja_ b.50.1.2 (A:) Acid pro 100.0 1.2E-58   9E-63  466.5  36.9  327   77-514     2-329 (329)
  4 d1smra_ b.50.1.2 (A:) Chymosin 100.0 3.1E-58 2.2E-62  465.0  34.0  332   76-514     3-335 (335)
  5 d2apra_ b.50.1.2 (A:) Acid pro 100.0 2.5E-56 1.9E-60  449.4  37.4  317   77-514     3-324 (325)
  6 d1hrna_ b.50.1.2 (A:) Chymosin 100.0 2.1E-56 1.5E-60  451.7  36.2  332   76-514     3-337 (337)
  7 d1am5a_ b.50.1.2 (A:) Pepsin(o 100.0 1.3E-56 9.8E-61  450.6  34.4  322   79-514     3-324 (324)
  8 d1miqa_ b.50.1.2 (A:) Plasmeps 100.0 9.7E-57 7.1E-61  460.9  33.1  324   76-514    48-372 (373)
  9 d1qdma2 b.50.1.2 (A:2-247,A:24 100.0 7.1E-55 5.1E-59  439.0  35.4  335   76-514     3-337 (337)
 10 d1oewa_ b.50.1.2 (A:) Endothia 100.0 6.9E-55   5E-59  440.0  33.7  319   76-512     4-329 (330)
 11 g1lya.1 b.50.1.2 (A:,B:) Cathe 100.0 3.5E-54 2.6E-58  434.1  37.5  333   77-514     2-338 (338)
 12 g1b5f.1 b.50.1.2 (A:,B:) Plant 100.0 1.7E-53 1.2E-57  427.6  35.5  325   77-514     2-326 (326)
 13 d1mppa_ b.50.1.2 (A:) Pepsin { 100.0 1.6E-53 1.1E-57  434.3  32.8  326   77-514     3-351 (357)
 14 d1j71a_ b.50.1.2 (A:) Acid pro 100.0 5.7E-53 4.1E-57  426.6  35.0  309   79-514     4-324 (334)
 15 d2bjua1 b.50.1.2 (A:1-329) Pla 100.0 4.6E-52 3.3E-56  417.7  32.7  324   76-514     2-326 (329)
 16 d1eaga_ b.50.1.2 (A:) Acid pro 100.0 7.4E-52 5.4E-56  419.4  33.4  314   79-514     4-331 (342)
 17 d3cmsa_ b.50.1.2 (A:) Chymosin 100.0 2.6E-51 1.9E-55  410.8  36.6  322   76-514     2-323 (323)
 18 d1izea_ b.50.1.2 (A:) Acid pro 100.0 1.2E-50 8.5E-55  407.1  33.6  314   76-514     5-323 (323)
 19 d1wkra_ b.50.1.2 (A:) Acid pro 100.0 1.9E-50 1.4E-54  408.8  34.8  314   77-514     2-333 (340)
 20 d1bxoa_ b.50.1.2 (A:) Acid pro 100.0 1.2E-49 8.8E-54  399.5  29.5  315   76-514     5-323 (323)
 21 d2qp8a1 b.50.1.2 (A:60-446) be 100.0   5E-48 3.7E-52  397.9  28.9  326   81-514     7-360 (387)
 22 d1t6ex_ b.50.1.2 (X:) Xylanase 100.0 3.4E-41 2.5E-45  345.5  20.2  338   79-514     4-373 (381)
 23 d1qdma1 a.64.1.2 (A:1S-104S) (  99.1 1.4E-11   1E-15  100.2   4.1  102  322-423     3-104 (104)
 24 d2gtga1 a.64.1.1 (A:2-79) Sapo  94.8  0.0081 5.9E-07   44.1   3.2   40  385-424     1-40  (78)
 25 d1nkla_ a.64.1.1 (A:) NK-lysin  92.9    0.02 1.4E-06   42.0   2.0   39  386-424     2-40  (78)
 26 d1n69a_ a.64.1.3 (A:) Saposin   92.4    0.04 2.9E-06   40.3   3.1   38  387-424     3-41  (78)
 27 d1of9a_ a.64.1.4 (A:) Ameobapo  92.3   0.035 2.6E-06   40.5   2.7   40  385-425     2-41  (77)
 28 d1nkla_ a.64.1.1 (A:) NK-lysin  92.1   0.047 3.4E-06   39.8   3.2   37  320-356    40-76  (78)
 29 d1l9la_ a.64.1.1 (A:) Granulys  91.1   0.064 4.7E-06   38.7   3.0   37  387-424     3-39  (74)
 30 d1of9a_ a.64.1.4 (A:) Ameobapo  91.0   0.029 2.1E-06   41.0   1.0   38  319-356    40-77  (77)
 31 d2gtga1 a.64.1.1 (A:2-79) Sapo  88.5   0.077 5.6E-06   38.5   1.6   37  321-357    42-78  (78)
 32 d1n69a_ a.64.1.3 (A:) Saposin   84.9    0.15 1.1E-05   37.0   1.5   35  321-356    43-77  (78)
 33 d1l9la_ a.64.1.1 (A:) Granulys  80.5    0.33 2.4E-05   34.7   1.8   33  321-353    41-73  (74)
 34 d4fiva_ b.50.1.1 (A:) Feline i  68.5     2.2 0.00016   32.9   4.0   28   91-120    12-39  (113)
 35 d2nmza1 b.50.1.1 (A:1-99) Huma  67.9     2.4 0.00018   31.4   3.8   27   91-119    10-36  (99)
 36 d2fmba_ b.50.1.1 (A:) EIAV pro  67.2     2.5 0.00018   32.1   4.0   26   91-118    10-35  (104)
 37 d1bxoa_ b.50.1.2 (A:) Acid pro  67.2     2.7  0.0002   38.2   5.1   42  255-306     3-44  (323)
 38 d3ecga1 b.50.1.1 (A:1-99) Huma  64.4     3.2 0.00023   30.7   3.8   26   91-118    10-35  (99)
 39 d1izea_ b.50.1.2 (A:) Acid pro  58.0     4.9 0.00036   36.2   5.1   42  255-306     3-44  (323)
 40 d1nsoa_ b.50.1.1 (A:) Mason-Pf  47.7     4.9 0.00035   30.5   2.6   28   91-120    11-38  (107)
 41 d1hvca_ b.50.1.1 (A:) Human im  42.3     9.5 0.00069   31.7   3.7   26   91-118    10-35  (203)
 42 d3cmsa_ b.50.1.2 (A:) Chymosin  27.8      21  0.0015   31.5   4.0   43  256-306     1-45  (323)
 43 d1hvca_ b.50.1.1 (A:) Human im  23.3      33  0.0024   28.3   3.8   39   76-120   103-141 (203)
 44 d2fmba_ b.50.1.1 (A:) EIAV pro  22.2      27   0.002   25.8   2.9   32  272-310     9-40  (104)

No 1  
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]}
Probab=100.00  E-value=4.3e-64  Score=515.55  Aligned_cols=370  Identities=42%  Similarity=0.757  Sum_probs=315.9

Q ss_pred             eEEEeccccCCchhhhhhhccccccccchhhccccccccCCCCCCCCccEEeceeccCceEEEEEEecCCCceEEEEeeC
Q 010230           30 LYRIGLKKRKFDLNNRVAARLDSKEGESFRTSIRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDT  109 (514)
Q Consensus        30 ~~~ipl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DT  109 (514)
                      ++||||+|+++.++...+.+...+   +++.+.++................||.|+.|.+|+++|+||||||+|.|++||
T Consensus         1 ~v~ipl~k~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~i~iGtP~Q~~~vi~DT   77 (370)
T d3psga_           1 LVKVPLVRKKSLRQNLIKDGKLKD---FLKTHKHNPASKYFPEAAALIGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDT   77 (370)
T ss_dssp             CEEEEEEECCCHHHHHHHTTCHHH---HHHHCCCCGGGGTCTTSCCSSCCCTTGGGTTCCEEEEEEETTTTEEEEEEEET
T ss_pred             CEEEecccCccHHHHHHHcCcHHH---HHHhcccchhhhhcccccCcccccccccccCCEEEEEEEEcCCCeEEEEEEeC
Confidence            589999999887776666554433   34332222211111122334556899999999999999999999999999999


Q ss_pred             CCCceeeeCCCCCCCcccCCCCcccCCCCCcceeCCceEEEEeccceEEEEEEEEEEEECceeecccEEEEEEeeCCccc
Q 010230          110 GSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTF  189 (514)
Q Consensus       110 GSs~~wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~G~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~  189 (514)
                      ||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|++.|.++.|++.+++..+.++.|+++....+..+
T Consensus        78 GSs~~Wv~~~~C~-~~~~~~~~~yd~~~Sst~~~~~~~~~~~Yg~Gs~~G~~~~d~~~~~~~~~~~~~f~~~~~~~~~~~  156 (370)
T d3psga_          78 GSSNLWVPSVYCS-SLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFL  156 (370)
T ss_dssp             TCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGG
T ss_pred             CCCCeEEECccCC-CcccccccccCCCcccccccCCCcEEEEeCCceEEEEEEEEEEeeeceeeeeeEEEEEeeccCcee
Confidence            9999999999997 445677889999999999999999999999999999999999999999999999999988776555


Q ss_pred             ccccceeeeecccccccCCCCCcHHHHHHHcCCCCCCEEEEEecCCCCCCCCcEEEECccCCCCCccceeEEeccCccce
Q 010230          190 LLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYW  269 (514)
Q Consensus       190 ~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w  269 (514)
                      .....+||+|||++..+.....+++++|+++|.|+.++||+|+.+..+  .+|.|+|||+|+.++.++++|+|+...++|
T Consensus       157 ~~~~~~Gi~gl~~~~~~~~~~~~~~~~l~~~~~i~~~~fs~~l~~~~~--~~g~l~~Gg~d~~~~~~~l~~~p~~~~~~w  234 (370)
T d3psga_         157 YYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDD--SGSVVLLGGIDSSYYTGSLNWVPVSVEGYW  234 (370)
T ss_dssp             GGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-------CEEEEETCCCGGGBSSCCEEEECSEETTE
T ss_pred             cccccccccccccCcccccCCCchhhhhhhhcccccceeEEEeecCCC--CCceEecCCcCchhcccceeEEeecccceE
Confidence            666789999999998887788899999999999999999999987643  279999999999999999999999999999


Q ss_pred             EEEeceEEEcCeeeeeecCCceEEEcCCCCCcccCHHHHHHHHHHhcCccccccchhhhhhhhhHHHHHHhhccCCccch
Q 010230          270 QFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKI  349 (514)
Q Consensus       270 ~v~l~~i~v~~~~~~~~~~~~~aiiDSGtt~~~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~  349 (514)
                      .+.++++.+++..+. ......++|||||+++++|++++++|.+++++..                              
T Consensus       235 ~v~~~~i~v~g~~~~-~~~~~~aiiDSGTs~~~lp~~~~~~i~~~l~~~~------------------------------  283 (370)
T d3psga_         235 QITLDSITMDGETIA-CSGGCQAIVDTGTSLLTGPTSAIANIQSDIGASE------------------------------  283 (370)
T ss_dssp             EEEECEEESSSSEEE-CTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEE------------------------------
T ss_pred             EEEEeeEEeCCeEEe-cCCCccEEEecCCceEeCCHHHHHHHHHHhCCee------------------------------
Confidence            999999999998875 3567899999999999999999999999997651                              


Q ss_pred             hccCcccccCCCCCcccccccccccCCcCCCCCCCCcccchhHHHHHHHHHhhhhhhhHHHHHHhhhhhcccCCCCCCCe
Q 010230          350 CSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGES  429 (514)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~  429 (514)
                                                                                                ...+.|
T Consensus       284 --------------------------------------------------------------------------~~~~~~  289 (370)
T d3psga_         284 --------------------------------------------------------------------------NSDGEM  289 (370)
T ss_dssp             --------------------------------------------------------------------------CTTCCE
T ss_pred             --------------------------------------------------------------------------ecCCcE
Confidence                                                                                      124668


Q ss_pred             eecCCCCCCCCcEEEEECCEEEEeCcccceeeecCCCCceeeeeeEecccCCCCCCeeeeChhhhcCeEEEEECCCCeEE
Q 010230          430 AVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVG  509 (514)
Q Consensus       430 ~~~C~~~~~~P~i~f~~gg~~~~i~~~~y~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riG  509 (514)
                      .++|.....+|+|+|+|+|+++.|+|++|+++.+    ..|...|..++.+.+.++.||||++|||++|+|||++++|||
T Consensus       290 ~~~C~~~~~~P~l~f~f~g~~~~l~~~~yi~~~~----~~c~~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IG  365 (370)
T d3psga_         290 VISCSSIDSLPDIVFTIDGVQYPLSPSAYILQDD----DSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVG  365 (370)
T ss_dssp             ECCGGGGGGCCCEEEEETTEEEEECHHHHEEECS----SCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEE
T ss_pred             EEeccccCCCceEEEEECCEEEEEChHHeEEEcC----CeEEEEEEEcccCCCCCCcEEECHHhhcCEEEEEECCCCEEE
Confidence            8899887789999999999999999999998743    469999988877767778999999999999999999999999


Q ss_pred             EEEcC
Q 010230          510 FAEAA  514 (514)
Q Consensus       510 fa~a~  514 (514)
                      |||+|
T Consensus       366 fAp~a  370 (370)
T d3psga_         366 LAPVA  370 (370)
T ss_dssp             EEEBC
T ss_pred             EEecC
Confidence            99986


No 2  
>g1htr.1 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens), progastricsin (pepsinogen C) [TaxId: 9606]}
Probab=100.00  E-value=2.4e-63  Score=510.23  Aligned_cols=371  Identities=41%  Similarity=0.747  Sum_probs=317.4

Q ss_pred             ceEEEeccccCCchhhhhhhccccccccchhhccccccccCCCCCCCCccEEeceeccCceEEEEEEecCCCceEEEEee
Q 010230           29 GLYRIGLKKRKFDLNNRVAARLDSKEGESFRTSIRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFD  108 (514)
Q Consensus        29 ~~~~ipl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~D  108 (514)
                      +++||||+|.++.++.+.+.+...+   +++.+  ++....+..........++.++.|.+|+++|+||||||++.|++|
T Consensus         1 ~~~~ipl~k~~~~r~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~Y~~~i~iGtP~q~~~~~~D   75 (372)
T g1htr.1           1 AVVKVPLKKFKSIRETMKEKGLLGE---FLRTH--KYDPAWKYRFGDLSVTYEPMAYMDAAYFGEISIGTPPQNFLVLFD   75 (372)
T ss_dssp             CCEEEEEEECCCHHHHHHHTTCHHH---HHTTC--CCCGGGGGCCCCCCCCCCGGGGTTCCEEEEEEETTTTEEEEEEEE
T ss_pred             CEEEEeeeechhHHHHHHHcCchHH---HHHhh--ccCcccccccCCcccccCcccccCCeEEEEEEEcCCCeEEEEEEe
Confidence            4789999998888777766655433   33322  222111222223444556678889999999999999999999999


Q ss_pred             CCCCceeeeCCCCCCCcccCCCCcccCCCCCcceeCCceEEEEeccceEEEEEEEEEEEECceeecccEEEEEEeeCCcc
Q 010230          109 TGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLT  188 (514)
Q Consensus       109 TGSs~~wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~G~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~  188 (514)
                      |||+++||+|..|. ...|..++.|+|++|+|++..++.+.+.|++|++.|.+++|+|++++..+.++.|+++.......
T Consensus        76 TGS~~~Wv~~~~C~-~~~~~~~~~y~~~~Sst~~~~~~~~~i~Yg~Gs~~G~~~~d~v~~~~~~~~~~~f~~~~~~~~~~  154 (372)
T g1htr.1          76 TGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTN  154 (372)
T ss_dssp             TTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEESSCSSGG
T ss_pred             CCCCceeeccCCCC-CccccCCCCCCccccCccccCCceeEEecCCeEEEEEEEeeeeeeccceeCceEEEEEEeccccc
Confidence            99999999999996 34556788999999999999999999999999999999999999999999999999998877666


Q ss_pred             cccccceeeeecccccccCCCCCcHHHHHHHcCCCCCCEEEEEecCCCCCCCCcEEEECccCCCCCccceeEEeccCccc
Q 010230          189 FLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGY  268 (514)
Q Consensus       189 ~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~  268 (514)
                      +.....+|++|||++..+....++++++|+++|.|.+++||+||..... ...|.|+|||+|++++.|++.|+|+....+
T Consensus       155 ~~~~~~~Gi~Gl~~~~~~~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~~~-~~~g~l~~Gg~d~~~~~g~~~~~p~~~~~~  233 (372)
T g1htr.1         155 FVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQG-SSGGAVVFGGVDSSLYTGQIYWAPVTQELY  233 (372)
T ss_dssp             GGGCSCCEEEECCCCSCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCS-SEEEEEEESSCCGGGEEEEEEEEEBCSSSS
T ss_pred             cccccccCcccccCCccccCCcchhhhHHHhcCCcccceeeEEeccCCC-CCcceEecCCcCcccccCceeEeeeccccc
Confidence            7777889999999999888888899999999999999999999976532 236999999999999999999999999999


Q ss_pred             eEEEeceEEEcCeeeeeecCCceEEEcCCCCCcccCHHHHHHHHHHhcCccccccchhhhhhhhhHHHHHHhhccCCccc
Q 010230          269 WQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQK  348 (514)
Q Consensus       269 w~v~l~~i~v~~~~~~~~~~~~~aiiDSGtt~~~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~  348 (514)
                      |.|.+++|.|++..+.+......++|||||++++||.+++++|++++++..                             
T Consensus       234 ~~v~l~~i~vg~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~-----------------------------  284 (372)
T g1htr.1         234 WQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQE-----------------------------  284 (372)
T ss_dssp             CEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEE-----------------------------
T ss_pred             eEEeeeeEEECCEEeeeecCCceEEEeCCCCcEEccHHHHHHHHHHhCCee-----------------------------
Confidence            999999999999988777778899999999999999999999999997651                             


Q ss_pred             hhccCcccccCCCCCcccccccccccCCcCCCCCCCCcccchhHHHHHHHHHhhhhhhhHHHHHHhhhhhcccCCCCCCC
Q 010230          349 ICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGE  428 (514)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~  428 (514)
                                                                                                 ...+.
T Consensus       285 ---------------------------------------------------------------------------~~~~~  289 (372)
T g1htr.1         285 ---------------------------------------------------------------------------DEYGQ  289 (372)
T ss_dssp             ---------------------------------------------------------------------------CTTSC
T ss_pred             ---------------------------------------------------------------------------ccCCc
Confidence                                                                                       23467


Q ss_pred             eeecCCCCCCCCcEEEEECCEEEEeCcccceeeecCCCCceeeeeeEecccCCCC-CCeeeeChhhhcCeEEEEECCCCe
Q 010230          429 SAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPR-GPLWILGDVFMGPYHTVFDYSNMR  507 (514)
Q Consensus       429 ~~~~C~~~~~~P~i~f~~gg~~~~i~~~~y~~~~~~~~~~~C~~~i~~~~~~~~~-~~~~iLG~~fl~~~y~vfD~~~~r  507 (514)
                      |.++|+....+|+|+|+|+|++|.|+|++|+++.+    +.|.++|+..+.+... .+.||||++|||++|++||++++|
T Consensus       290 ~~~~C~~~~~~P~i~f~f~g~~~~l~~~~yi~~~~----~~c~~~i~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~  365 (372)
T g1htr.1         290 FLVNCNSIQNLPSLTFIINGVEFPLPPSSYILSNN----GYCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNR  365 (372)
T ss_dssp             EEECGGGGGGSCCEEEEETTEEEEECHHHHEEECS----SCEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTE
T ss_pred             EEeeccccCcCCcEEEEECCEEEEECHHHeEEecC----CEEEEEEEecccCCCCCCccEEEcHHhhCCEEEEEECCCCE
Confidence            89999988899999999999999999999998732    5799999877654433 357999999999999999999999


Q ss_pred             EEEEEcC
Q 010230          508 VGFAEAA  514 (514)
Q Consensus       508 iGfa~a~  514 (514)
                      ||||+||
T Consensus       366 iGfA~Aa  372 (372)
T g1htr.1         366 VGFATAA  372 (372)
T ss_dssp             EEEEEEC
T ss_pred             EEEEecC
Confidence            9999997


No 3  
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]}
Probab=100.00  E-value=1.2e-58  Score=466.54  Aligned_cols=327  Identities=44%  Similarity=0.841  Sum_probs=294.4

Q ss_pred             ccEEeceeccCceEEEEEEecCCCceEEEEeeCCCCceeeeCCCCCCCcccCCCCcccCCCCCcceeCCceEEEEeccce
Q 010230           77 ADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA  156 (514)
Q Consensus        77 ~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~G~  156 (514)
                      +..+||+|+.|.+|+++|.||||||++.|++||||+++||+|..|. ...|..++.|+|++|+|++..++.+.+.|++|+
T Consensus         2 ~~~vpl~n~~~~~Y~~~i~iGtP~q~~~~~iDTGSs~~Wv~~~~C~-~~~c~~~~~f~~~~Sst~~~~~~~~~~~y~~gs   80 (329)
T d1dpja_           2 GHDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECG-SLACFLHSKYDHEASSSYKANGTEFAIQYGTGS   80 (329)
T ss_dssp             CEEEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEE
T ss_pred             CcceEeEEccCCEEEEEEEEeCCCeEEEEEEECCcccEEEECCCCC-CccccCCCcCCcccCCceeECCeeEEEEccCce
Confidence            4579999999999999999999999999999999999999999996 557778899999999999999999999999999


Q ss_pred             EEEEEEEEEEEECceeecccEEEEEEeeCCcccccccceeeeecccccccCCCCCcHHHHHHHcCCCCCCEEEEEecCCC
Q 010230          157 ISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNA  236 (514)
Q Consensus       157 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l~~~~  236 (514)
                      +.|.+++|++++++.++.++.|+++.......+.....+|++|||++..+.......+.+|..++.|.+++||+||.+..
T Consensus        81 ~~G~~~~D~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~Glg~~~~~~~~~~~~~~~l~~~~~i~~~~fs~~l~~~~  160 (329)
T d1dpja_          81 LEGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTS  160 (329)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGG
T ss_pred             EEEEEEEEEEEecceEEeeEEEEEEeeccCccccccccccccccccCccccccCCchhhhHhhccCcccceEEEEEEecC
Confidence            99999999999999999999999999877666667778999999998887777778899999999999999999997643


Q ss_pred             -CCCCCcEEEECccCCCCCccceeEEeccCccceEEEeceEEEcCeeeeeecCCceEEEcCCCCCcccCHHHHHHHHHHh
Q 010230          237 -DEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAI  315 (514)
Q Consensus       237 -~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDSGtt~~~lP~~~~~~l~~~l  315 (514)
                       +....|.|+|||+|++++.++++|+|+...++|.|.+++|.+++..+.  .....++|||||+++++|++++++|.+++
T Consensus       161 ~~~~~~g~l~~Gg~d~~~~~~~~~~~~~~~~~~~~v~~~~i~v~~~~~~--~~~~~~iiDSGts~~~lp~~~~~~l~~~~  238 (329)
T d1dpja_         161 KDTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAE--LESHGAAIDTGTSLITLPSGLAEMINAEI  238 (329)
T ss_dssp             GTCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE--CSSCEEEECTTCSCEEECHHHHHHHHHHH
T ss_pred             CCcCCCCceECCCCchhhccCceeEecccccceeEEEEeeEEECCeEee--eeecccccCcccceeeCCHHHHHHHHHHh
Confidence             223479999999999999999999999999999999999999999875  35678999999999999999999999999


Q ss_pred             cCccccccchhhhhhhhhHHHHHHhhccCCccchhccCcccccCCCCCcccccccccccCCcCCCCCCCCcccchhHHHH
Q 010230          316 GATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAV  395 (514)
Q Consensus       316 ~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (514)
                      ++..                                                                            
T Consensus       239 ~~~~----------------------------------------------------------------------------  242 (329)
T d1dpja_         239 GAKK----------------------------------------------------------------------------  242 (329)
T ss_dssp             TCEE----------------------------------------------------------------------------
T ss_pred             CCcc----------------------------------------------------------------------------
Confidence            7641                                                                            


Q ss_pred             HHHHHhhhhhhhHHHHHHhhhhhcccCCCCCCCeeecCCCCCCCCcEEEEECCEEEEeCcccceeeecCCCCceeeeeeE
Q 010230          396 VWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFS  475 (514)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~gg~~~~i~~~~y~~~~~~~~~~~C~~~i~  475 (514)
                                                  ...+.|.++|+....+|+|+|+|+|.++.|+|++|+++.+    +.|...|.
T Consensus       243 ----------------------------~~~~~~~~~c~~~~~~P~i~f~f~g~~~~l~p~~y~~~~~----~~c~~~~~  290 (329)
T d1dpja_         243 ----------------------------GWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTLEVS----GSCISAIT  290 (329)
T ss_dssp             ----------------------------CTTSSEEECGGGGGGCCCEEEEETTEEEEECTTTSEEEET----TEEEECEE
T ss_pred             ----------------------------ccceeEEEeccccCccceEEEEECCEEEEECHHHeEEecC----CcEEEEEE
Confidence                                        1245688999887789999999999999999999998754    47999998


Q ss_pred             ecccCCCCCCeeeeChhhhcCeEEEEECCCCeEEEEEcC
Q 010230          476 ALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA  514 (514)
Q Consensus       476 ~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~a~  514 (514)
                      ..+.++..++.+|||.+|||++|++||++++|||||||.
T Consensus       291 ~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~  329 (329)
T d1dpja_         291 PMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI  329 (329)
T ss_dssp             ECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred             ECccCCCCCCcEEEcHHhhCcEEEEEECCCCEEEEEEeC
Confidence            887666667789999999999999999999999999984


No 4  
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=3.1e-58  Score=464.97  Aligned_cols=332  Identities=42%  Similarity=0.843  Sum_probs=288.9

Q ss_pred             CccEEeceeccCceEEEEEEecCCCceEEEEeeCCCCceeeeCCCCCCC-cccCCCCcccCCCCCcceeCCceEEEEecc
Q 010230           76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFS-IACYFHSKYRSGRSSTYKKNGKSADIHYGT  154 (514)
Q Consensus        76 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~C~~~-~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~  154 (514)
                      -...++|+|+.|.+|+++|.||||||++.|++||||+++||+|+.|..+ ..|..++.|+|++|+|++..++.+.+.|++
T Consensus         3 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~l~~DTGSs~~Wv~~~~C~~~~~~c~~~~~f~~~~SsT~~~~~~~~~~~Y~~   82 (335)
T d1smra_           3 LISPVVLTNYLNSQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDSSSYMENGDDFTIHYGS   82 (335)
T ss_dssp             BCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCGGGGGSCCBCGGGCTTCEEEEEEEEEEETT
T ss_pred             cccceeecccCCCEEEEEEEECCCCeEEEEEEECCcccEEEEcCCCCCccccccCCCcCCCccCcccccCCCcEEEEecC
Confidence            4567999999999999999999999999999999999999999998742 357788999999999999999999999999


Q ss_pred             ceEEEEEEEEEEEECceeecccEEEEEEeeCCcccccccceeeeecccccccCCCCCcHHHHHHHcCCCCCCEEEEEecC
Q 010230          155 GAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNR  234 (514)
Q Consensus       155 G~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l~~  234 (514)
                      |++.|.+++|++++++.+..++.+++.. .....+....++|++|||+.........+++.+|++++.|.++.|++||.+
T Consensus        83 gs~~G~~~~D~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Gi~glg~~~~~~~~~~~~~~~l~~~~~i~~~~fs~~l~~  161 (335)
T d1smra_          83 GRVKGFLSQDSVTVGGITVTQTFGEVTQ-LPLIPFMLAQFDGVLGMGFPAQAVGGVTPVFDHILSQGVLKEKVFSVYYNR  161 (335)
T ss_dssp             EEEEEEEEEEEEEETTEEEEEEEEEEEE-CCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCBSSSEEEEEECC
T ss_pred             ceEEEEEEEEEEEecccccccEEEEEEe-cccccccccccccccccccccccccCCCchHHHHHHhcCccccceeEEecc
Confidence            9999999999999999988766555444 334445666789999999988776677789999999999999999999987


Q ss_pred             CCCCCCCcEEEECccCCCCCccceeEEeccCccceEEEeceEEEcCeeeeeecCCceEEEcCCCCCcccCHHHHHHHHHH
Q 010230          235 NADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHA  314 (514)
Q Consensus       235 ~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDSGtt~~~lP~~~~~~l~~~  314 (514)
                      ... ...|.|+|||+|+.++.++++|+|+....+|.|.+++|.+++..+. ......++|||||+++++|++++++|+++
T Consensus       162 ~~~-~~~g~l~~G~~d~~~~~~~~~~~~~~~~~~~~v~~~~i~~~~~~~~-~~~~~~~iiDSGtt~~~lp~~~~~~l~~~  239 (335)
T d1smra_         162 GPH-LLGGEVVLGGSDPQHYQGDFHYVSLSKTDSWQITMKGVSVGSSTLL-CEEGCEVVVDTGSSFISAPTSSLKLIMQA  239 (335)
T ss_dssp             SSS-SCCEEEEESSCCGGGEEEEEEEEECSBTTTTEEEEEEEEETTSCCB-CTTCEEEEECTTBSSEEECHHHHHHHHHH
T ss_pred             CCC-ccceeEeccccCcccccCceeeeecccccceEEEEeEEEECCeeEe-ccCCceEEEeCCCCcccCCHHHHHHHHHH
Confidence            643 2369999999999999999999999999999999999999998775 34678899999999999999999999999


Q ss_pred             hcCccccccchhhhhhhhhHHHHHHhhccCCccchhccCcccccCCCCCcccccccccccCCcCCCCCCCCcccchhHHH
Q 010230          315 IGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMA  394 (514)
Q Consensus       315 l~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (514)
                      +++..                                                                           
T Consensus       240 ~~~~~---------------------------------------------------------------------------  244 (335)
T d1smra_         240 LGAKE---------------------------------------------------------------------------  244 (335)
T ss_dssp             HTCEE---------------------------------------------------------------------------
T ss_pred             hCCee---------------------------------------------------------------------------
Confidence            97651                                                                           


Q ss_pred             HHHHHHhhhhhhhHHHHHHhhhhhcccCCCCCCCeeecCCCCCCCCcEEEEECCEEEEeCcccceeeecCCCCceeeeee
Q 010230          395 VVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGF  474 (514)
Q Consensus       395 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~gg~~~~i~~~~y~~~~~~~~~~~C~~~i  474 (514)
                                                   .....|.++|.....+|.|+|+|+|+++.|+|++|+++..+.....|+..|
T Consensus       245 -----------------------------~~~~~~~~~c~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~~  295 (335)
T d1smra_         245 -----------------------------KRLHEYVVSCSQVPTLPDISFNLGGRAYTLSSTDYVLQYPNRRDKLCTVAL  295 (335)
T ss_dssp             -----------------------------EETTEEEEEGGGGGGSCCEEEEETTEEEEECHHHHBTT----CCCEEEBSE
T ss_pred             -----------------------------ccCCceeecccccCCCCccEEEECCeEEEEChHHeEEEeccCCCCEEEEEE
Confidence                                         112346788887788999999999999999999999876666678999999


Q ss_pred             EecccCCCCCCeeeeChhhhcCeEEEEECCCCeEEEEEcC
Q 010230          475 SALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA  514 (514)
Q Consensus       475 ~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~a~  514 (514)
                      +..+.....++.+|||.+|||++|+|||++++|||||+||
T Consensus       296 ~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfA~ak  335 (335)
T d1smra_         296 HAMDIPPPTGPVWVLGATFIRKFYTEFDRHNNRIGFALAR  335 (335)
T ss_dssp             EECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred             EecCcCCCCCCcEEECHHHhCcEEEEEECCCCEEEEEEcC
Confidence            9887766677789999999999999999999999999996


No 5  
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]}
Probab=100.00  E-value=2.5e-56  Score=449.40  Aligned_cols=317  Identities=34%  Similarity=0.660  Sum_probs=276.0

Q ss_pred             ccEEeceecc-CceEEEEEEecCCCceEEEEeeCCCCceeeeCCCCCCCcccC-CCCcccCCCCCcceeCCceEEEEecc
Q 010230           77 ADIVALKNYM-DAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACY-FHSKYRSGRSSTYKKNGKSADIHYGT  154 (514)
Q Consensus        77 ~~~~~l~n~~-~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~C~~~~~C~-~~~~y~~~~SsT~~~~~~~~~~~Y~~  154 (514)
                      ..++||.++. |.+|+++|.||||||++.|++||||+++||+|+.|.   .|. .++.|+|++|+||+..++.+.+.|++
T Consensus         3 ~~~vpl~~~~~d~~Y~~~i~iGtP~Q~~~v~vDTGS~~~Wv~~~~C~---~c~~~~~~y~~~~SsT~~~~~~~~~~~y~~   79 (325)
T d2apra_           3 VGTVPMTDYGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCT---NCGSGQTKYDPNQSSTYQADGRTWSISYGD   79 (325)
T ss_dssp             TTEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCS---SCCTTSCCBCGGGCTTCEEEEEEEEEECTT
T ss_pred             ceEEEeEecCCCcEEEEEEEEeCCCEEEEEEEECCCCcEEEeCCCCC---ccccCCCccCcccCCceeECCeEEEEEeCC
Confidence            4679999885 478999999999999999999999999999999996   443 45789999999999999999999999


Q ss_pred             ce-EEEEEEEEEEEECceeecccEEEEEEeeCCcccccccceeeeecccccccC-CCCCcHHHHHHHcCCCCCCEEEEEe
Q 010230          155 GA-ISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISV-GKAVPVWYNMVNQGLVNEPVFSFWF  232 (514)
Q Consensus       155 G~-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~-~~~~~~~~~l~~qg~i~~~~FSl~l  232 (514)
                      |. +.|.+++|++++++.+++++.|+++..... .+.....+||+|||+...+. ....+++.+++++|.|++++||+||
T Consensus        80 g~~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~GilGlg~~~~~~~~~~~~~~~~l~~~g~i~~~~fs~~l  158 (325)
T d2apra_          80 GSSASGILAKDNVNLGGLLIKGQTIELAKREAA-SFASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYL  158 (325)
T ss_dssp             SCEEEEEEEEEEEEETTEEEEEEEEEEEEEECH-HHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSSEEEEEE
T ss_pred             CCeEEEEEEeeeEEeeeeeccCcceeeeeeecc-cccccccCcccccccccccccccCCcchhHHHhhccccceeEEEEe
Confidence            96 899999999999999999999999887643 24455689999999987764 3456799999999999999999999


Q ss_pred             cCCCCCCCCcEEEECccCCCCCccceeEEecc-CccceEEEeceEEEcCeeeeeecCCceEEEcCCCCCcccCHHHHHHH
Q 010230          233 NRNADEEEGGEIVFGGMDPDHYKGEHTYVPVT-QKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQV  311 (514)
Q Consensus       233 ~~~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDSGtt~~~lP~~~~~~l  311 (514)
                      .+..+ ...|.|+|||+|+.++.++++|+|+. ..++|.|.++++.+++..+.   ....++|||||++++||.+++++|
T Consensus       159 ~~~~~-~~~g~l~~Gg~d~~~~~~~~~~~~~~~~~~~~~v~l~~i~i~~~~~~---~~~~~iiDSGt~~~~lp~~~~~~l  234 (325)
T d2apra_         159 GKAKN-GGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTSTVA---SSFDGILDTGTTLLILPNNIAASV  234 (325)
T ss_dssp             CCGGG-TCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETTEEEE---CCEEEEECTTCSSEEEEHHHHHHH
T ss_pred             ccCCC-CCCeEEEecCCCchhhccceeeEeecCCCceEEEEEeeEEECCEeec---ceeeeeccCCCccccCCHHHHHHH
Confidence            77542 23799999999999999999999986 46799999999999998874   567899999999999999999999


Q ss_pred             HHHhcCccccccchhhhhhhhhHHHHHHhhccCCccchhccCcccccCCCCCcccccccccccCCcCCCCCCCCcccchh
Q 010230          312 NHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTC  391 (514)
Q Consensus       312 ~~~l~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (514)
                      .+.+++..                                                                        
T Consensus       235 ~~~~~~~~------------------------------------------------------------------------  242 (325)
T d2apra_         235 ARAYGASD------------------------------------------------------------------------  242 (325)
T ss_dssp             HHHHTCEE------------------------------------------------------------------------
T ss_pred             HHHhCCcc------------------------------------------------------------------------
Confidence            99987651                                                                        


Q ss_pred             HHHHHHHHHhhhhhhhHHHHHHhhhhhcccCCCCCCCeeecCCCCCCCCcEEEEECCEEEEeCcccceeeecCCCCceee
Q 010230          392 EMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCI  471 (514)
Q Consensus       392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~gg~~~~i~~~~y~~~~~~~~~~~C~  471 (514)
                                                      ...+.|.++|+. ..+|+|+|+|+|.++.|+|++|+++..+   +.|+
T Consensus       243 --------------------------------~~~~~~~~~C~~-~~~p~i~f~f~g~~~~i~~~~y~~~~~~---~~C~  286 (325)
T d2apra_         243 --------------------------------NGDGTYTISCDT-SAFKPLVFSINGASFQVSPDSLVFEEFQ---GQCI  286 (325)
T ss_dssp             --------------------------------CSSSCEEECSCG-GGCCCEEEEETTEEEEECGGGGEEEEET---TEEE
T ss_pred             --------------------------------cCCCceeecccC-CCCCcEEEEECCEEEEEChHHeEEecCC---CEEE
Confidence                                            124568999975 4689999999999999999999987653   4899


Q ss_pred             eeeEecccCCCCCCeeeeChhhhcCeEEEEECCCCeEEEEEcC
Q 010230          472 SGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA  514 (514)
Q Consensus       472 ~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~a~  514 (514)
                      ++|+..     ..+.+|||.+|||++|+|||++++||||||+|
T Consensus       287 ~~i~~~-----~~~~~iLG~~flr~~y~vfD~~~~~IGfAp~a  324 (325)
T d2apra_         287 AGFGYG-----NWGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA  324 (325)
T ss_dssp             ESEEEE-----SSSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred             EEEccC-----CCCCEEECHHHhCcEEEEEECCCCEEeEEEcC
Confidence            988753     33578999999999999999999999999997


No 6  
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.1e-56  Score=451.69  Aligned_cols=332  Identities=42%  Similarity=0.835  Sum_probs=293.1

Q ss_pred             CccEEeceeccCceEEEEEEecCCCceEEEEeeCCCCceeeeCCCCCCC-cccCCCCcccCCCCCcceeCCceEEEEecc
Q 010230           76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFS-IACYFHSKYRSGRSSTYKKNGKSADIHYGT  154 (514)
Q Consensus        76 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~C~~~-~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~  154 (514)
                      ....+.|.|+.|.+|+++|.||||||++.|++||||+++||+|..|..+ ..|..++.|+|+.|+||+..++.+.+.|++
T Consensus         3 ~~~~~~l~n~~d~~Y~~~i~iGtP~Q~~~~~~DTGS~~~Wv~~~~C~~~~~~c~~~~~y~~~~Sst~~~~~~~~~~~~~~   82 (337)
T d1hrna_           3 TTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYST   82 (337)
T ss_dssp             BCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHSSCCBCGGGCSSCEEEEEEEEEEETT
T ss_pred             cccceEeEEcCCcEEEEEEEEeCCCEEEEEEEECCCcceEEEcCCCCCcccccccCCCCChhhCCceEECCccEEEEecC
Confidence            4567999999999999999999999999999999999999999998642 347778899999999999999999999999


Q ss_pred             ceEEEEEEEEEEEECceeecccEEEEEEeeCCcccccccceeeeecccccccCCCCCcHHHHHHHcCCCCCCEEEEEecC
Q 010230          155 GAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNR  234 (514)
Q Consensus       155 G~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l~~  234 (514)
                      |++.|.++.|++.+++..+.++.+++.... ...+.....+|++|||++........+++.+|++++.|..+.|++||.+
T Consensus        83 g~~~G~~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~GilGl~~~~~~~~~~~~~~~~l~~~~~i~~~~f~~~l~~  161 (337)
T d1hrna_          83 GTVSGFLSQDIITVGGITVTQMFGEVTEMP-ALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNR  161 (337)
T ss_dssp             EEEEEEEEEEEEEETTEEEEEEEEEEEECC-HHHHTTCSSCEEEECSCGGGCGGGCCCHHHHHHTTTCBSSSEEEEEECC
T ss_pred             cEEEEEEEEeeeeecCceeeeEEEEEEecc-ccccccccccccccccccccccCCCCcchhhHhhcCCCccceeeEEecc
Confidence            999999999999999999987777665543 3345566789999999987776677789999999999999999999987


Q ss_pred             CCC--CCCCcEEEECccCCCCCccceeEEeccCccceEEEeceEEEcCeeeeeecCCceEEEcCCCCCcccCHHHHHHHH
Q 010230          235 NAD--EEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVN  312 (514)
Q Consensus       235 ~~~--~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDSGtt~~~lP~~~~~~l~  312 (514)
                      ...  ....|.|+||++|++++.+++.|+|+...++|.+.++++.+++.... ......++|||||++++||++++++|+
T Consensus       162 ~~~~~~~~~g~l~~G~~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~iiDSGtt~~~lp~~~~~~l~  240 (337)
T d1hrna_         162 DSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLM  240 (337)
T ss_dssp             CCC---CCCEEEEETSCCGGGEEEEEEEEEBSSTTSCEEEECEEEETTEEEE-STTCEEEEECTTCSSEEECHHHHHHHH
T ss_pred             ccCCCcccCceEEccccChhhcCCceeeeeeeccceeEEeecceeccccccc-cccCcceEEeCCCcceeccHHHHHHHH
Confidence            542  22469999999999999999999999999999999999999988765 456778999999999999999999999


Q ss_pred             HHhcCccccccchhhhhhhhhHHHHHHhhccCCccchhccCcccccCCCCCcccccccccccCCcCCCCCCCCcccchhH
Q 010230          313 HAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCE  392 (514)
Q Consensus       313 ~~l~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (514)
                      +++++..                                                                         
T Consensus       241 ~~~~~~~-------------------------------------------------------------------------  247 (337)
T d1hrna_         241 EALGAKK-------------------------------------------------------------------------  247 (337)
T ss_dssp             HHHTCEE-------------------------------------------------------------------------
T ss_pred             HHhCCcc-------------------------------------------------------------------------
Confidence            9997651                                                                         


Q ss_pred             HHHHHHHHhhhhhhhHHHHHHhhhhhcccCCCCCCCeeecCCCCCCCCcEEEEECCEEEEeCcccceeeecCCCCceeee
Q 010230          393 MAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCIS  472 (514)
Q Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~gg~~~~i~~~~y~~~~~~~~~~~C~~  472 (514)
                                                      ..+.|.++|.....+|.|+|+|+|++++|+|++|+++..+.....|++
T Consensus       248 --------------------------------~~~~~~~~c~~~~~~P~l~f~f~g~~~~l~p~~yl~~~~~~~~~~C~~  295 (337)
T d1hrna_         248 --------------------------------RLFDYVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTL  295 (337)
T ss_dssp             --------------------------------CSSCEEEETTTGGGCCCEEEEETTEEEEECHHHHBCCCCCCTTSEEEB
T ss_pred             --------------------------------cccceeeeccccCCCCceeEEECCEEEEEChHHeEEEecCCCCCEEEE
Confidence                                            124578899988889999999999999999999998776666678999


Q ss_pred             eeEecccCCCCCCeeeeChhhhcCeEEEEECCCCeEEEEEcC
Q 010230          473 GFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA  514 (514)
Q Consensus       473 ~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~a~  514 (514)
                      +|+..+.....++.||||.+|||++|+|||++++|||||+|+
T Consensus       296 ~i~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~IGfA~ak  337 (337)
T d1hrna_         296 AIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR  337 (337)
T ss_dssp             SEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred             EEEcCCcCCCCCCCEEECHHhhCCEEEEEECCCCEEEEEEcC
Confidence            999888766677789999999999999999999999999996


No 7  
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]}
Probab=100.00  E-value=1.3e-56  Score=450.61  Aligned_cols=322  Identities=43%  Similarity=0.776  Sum_probs=287.5

Q ss_pred             EEeceeccCceEEEEEEecCCCceEEEEeeCCCCceeeeCCCCCCCcccCCCCcccCCCCCcceeCCceEEEEeccceEE
Q 010230           79 IVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAIS  158 (514)
Q Consensus        79 ~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~G~~~  158 (514)
                      ..+|+|+.|.+|+++|.||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.+.+.|++|++.
T Consensus         3 ~~~~~n~~d~~Y~~~i~iGtP~q~~~~~~DTGS~~~Wv~~~~C~-~~~~~~~~~f~p~~Sst~~~~~~~~~~~y~~g~~~   81 (324)
T d1am5a_           3 TEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCS-AQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMR   81 (324)
T ss_dssp             EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEE
T ss_pred             ceeeeccCCcEEEEEEEEcCCCeEEEEEEECCCcceEEecCCCC-ccccCCCCCCCcccCCceeECCcceEEEecCCceE
Confidence            47899999999999999999999999999999999999999997 45677889999999999999999999999999999


Q ss_pred             EEEEEEEEEECceeecccEEEEEEeeCCcccccccceeeeecccccccCCCCCcHHHHHHHcCCCCCCEEEEEecCCCCC
Q 010230          159 GFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADE  238 (514)
Q Consensus       159 G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l~~~~~~  238 (514)
                      |.++.|.+++++.++.++.|+++....+..+.....+|++|||++..+.....+++++++++++|+++.||+||.+..  
T Consensus        82 G~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~gLg~~~~~~~~~~~~~~~~~~~~~i~~~~fs~~l~~~~--  159 (324)
T d1am5a_          82 GILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGG--  159 (324)
T ss_dssp             EEEEEEEEESSSSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTT--
T ss_pred             EEEEEeecccCcccceeEEEEEeeeeccceeecccccccccccCcccccCCCCcHHHHHHhccCcccceEEEEecCCC--
Confidence            999999999999999999999999887765666678999999998887777788999999999999999999998653  


Q ss_pred             CCCcEEEECccCCCCCccceeEEeccCccceEEEeceEEEcCeeeeeecCCceEEEcCCCCCcccCHHHHHHHHHHhcCc
Q 010230          239 EEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGAT  318 (514)
Q Consensus       239 ~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDSGtt~~~lP~~~~~~l~~~l~~~  318 (514)
                      ...|.|+|||+|++++.+++.|+|+...++|.+.++++.+++..+.  .....++||||++++++|++++++|+++++..
T Consensus       160 ~~~g~l~~Gg~d~~~~~~~~~~~p~~~~~~~~v~~~~~~~~~~~~~--~~~~~~iiDsGts~~~lp~~~~~~l~~~i~~~  237 (324)
T d1am5a_         160 ANGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAA--CEGCQAIVDTGTSKIVAPVSALANIMKDIGAS  237 (324)
T ss_dssp             CSCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECC--CCCEEEEECTTCSSEEECTTTHHHHHHHHTCE
T ss_pred             CCCceEEeeccccccccCceEEeeccccceEEEEEeeEEeCCcccc--cCCcceeeccCcccccCCHHHHHHHHHHhCCc
Confidence            2379999999999999999999999999999999999999998874  46788999999999999999999999999765


Q ss_pred             cccccchhhhhhhhhHHHHHHhhccCCccchhccCcccccCCCCCcccccccccccCCcCCCCCCCCcccchhHHHHHHH
Q 010230          319 GIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWM  398 (514)
Q Consensus       319 ~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (514)
                      .                                                                               
T Consensus       238 ~-------------------------------------------------------------------------------  238 (324)
T d1am5a_         238 E-------------------------------------------------------------------------------  238 (324)
T ss_dssp             E-------------------------------------------------------------------------------
T ss_pred             c-------------------------------------------------------------------------------
Confidence            1                                                                               


Q ss_pred             HHhhhhhhhHHHHHHhhhhhcccCCCCCCCeeecCCCCCCCCcEEEEECCEEEEeCcccceeeecCCCCceeeeeeEecc
Q 010230          399 QNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALD  478 (514)
Q Consensus       399 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~gg~~~~i~~~~y~~~~~~~~~~~C~~~i~~~~  478 (514)
                                                ..+.+...|.....+|.|+|+|+|.++.|||++|+....    ..|...|+..+
T Consensus       239 --------------------------~~~~~~~~~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~----~~c~~~i~~~~  288 (324)
T d1am5a_         239 --------------------------NQGEMMGNCASVQSLPDITFTINGVKQPLPPSAYIEGDQ----AFCTSGLGSSG  288 (324)
T ss_dssp             --------------------------CCCCEECCTTSSSSSCCEEEEETTEEEEECHHHHEEESS----SCEEECEEECC
T ss_pred             --------------------------cCCcccccccccccCCceEEEECCEEEEECHHHhEecCC----CeEEEEEEecC
Confidence                                      112344445555689999999999999999999986632    57999999887


Q ss_pred             cCCCCCCeeeeChhhhcCeEEEEECCCCeEEEEEcC
Q 010230          479 VAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA  514 (514)
Q Consensus       479 ~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~a~  514 (514)
                      ++....+.+|||.+|||++|++||++++||||||||
T Consensus       289 ~~~~~~~~~ILG~~fl~~~y~vfD~~~~~igfA~aa  324 (324)
T d1am5a_         289 VPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA  324 (324)
T ss_dssp             SCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred             cCCCCCCCEEECHHhhcCEEEEEECCCCEEEEEEcC
Confidence            766667789999999999999999999999999997


No 8  
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]}
Probab=100.00  E-value=9.7e-57  Score=460.87  Aligned_cols=324  Identities=32%  Similarity=0.640  Sum_probs=281.8

Q ss_pred             CccEEeceeccCceEEEEEEecCCCceEEEEeeCCCCceeeeCCCCCCCcccCCCCcccCCCCCcceeCCceEEEEeccc
Q 010230           76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG  155 (514)
Q Consensus        76 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~G  155 (514)
                      ....++|.|+.|.+|+++|+||||||+|.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.+.+.|++|
T Consensus        48 ~~~~~~l~n~~~~~Y~~~I~iGtP~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~SsT~~~~~~~~~~~y~~G  126 (373)
T d1miqa_          48 ENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCN-SSGCSIKNLYDSSKSKSYEKDGTKVDITYGSG  126 (373)
T ss_dssp             TTBCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCC-SSGGGGSCCBCGGGCTTCEEEEEEEEEEETTE
T ss_pred             CCCeEEeeeccCCEEEEEEEECCCCEEEEEEEECCchheEEECCCCC-CccccCCCccCCCCCCceeECCccEEEEeCCc
Confidence            55678999999999999999999999999999999999999999997 56788889999999999999999999999999


Q ss_pred             eEEEEEEEEEEEECceeecccEEEEEEeeCC-cccccccceeeeecccccccCCCCCcHHHHHHHcCCCCCCEEEEEecC
Q 010230          156 AISGFFSEDHVKIGDLVVKDQEFIEATREPS-LTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNR  234 (514)
Q Consensus       156 ~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~-~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l~~  234 (514)
                      ++.|.+++|+|++++..++++.|+++..... ..+.....+|++|++++........+++.++++++.+..++||+|+.+
T Consensus       127 ~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~  206 (373)
T d1miqa_         127 TVKGFFSKDLVTLGHLSMPYKFIEVTDTDDLEPIYSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPV  206 (373)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEEEEEECGGGTTHHHHSCCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCT
T ss_pred             EEEEEEEEEEEEEcCcceEeeEEEEEeccccCccccccccccccccccccccCCCccceehhhhhhhccccceEEEEecc
Confidence            9999999999999999999999988775432 234455779999999998887888899999999999999999999987


Q ss_pred             CCCCCCCcEEEECccCCCCCccceeEEeccCccceEEEeceEEEcCeeeeeecCCceEEEcCCCCCcccCHHHHHHHHHH
Q 010230          235 NADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHA  314 (514)
Q Consensus       235 ~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDSGtt~~~lP~~~~~~l~~~  314 (514)
                      ...  ..|.++|||+|++++.|++.|+|+.+.++|.+.++ +.+++...    ....++|||||+++++|.+++++|+++
T Consensus       207 ~~~--~~g~l~~Gg~d~~~~~g~~~~~pv~~~~~w~i~l~-~~~~~~~~----~~~~~iiDTGTs~~~lP~~~~~~l~~~  279 (373)
T d1miqa_         207 HDV--HAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLD-VHFGKQTM----EKANVIVDSGTTTITAPSEFLNKFFAN  279 (373)
T ss_dssp             TCT--TEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEE-EEETTEEE----EEEEEEECTTBSSEEECHHHHHHHHHH
T ss_pred             CCC--CCceeeccCCCchhccceeeEEeccccceEEEEEE-EEECcEec----CCcceEeccCCceeccCHHHHHHHHHH
Confidence            642  37899999999999999999999999999999986 55666554    346799999999999999999999999


Q ss_pred             hcCccccccchhhhhhhhhHHHHHHhhccCCccchhccCcccccCCCCCcccccccccccCCcCCCCCCCCcccchhHHH
Q 010230          315 IGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMA  394 (514)
Q Consensus       315 l~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (514)
                      +++...                                                                          
T Consensus       280 i~~~~~--------------------------------------------------------------------------  285 (373)
T d1miqa_         280 LNVIKV--------------------------------------------------------------------------  285 (373)
T ss_dssp             HTCEEC--------------------------------------------------------------------------
T ss_pred             hCCeec--------------------------------------------------------------------------
Confidence            976510                                                                          


Q ss_pred             HHHHHHhhhhhhhHHHHHHhhhhhcccCCCCCCCeeecCCCCCCCCcEEEEECCEEEEeCcccceeeecCCCCceeeeee
Q 010230          395 VVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGF  474 (514)
Q Consensus       395 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~gg~~~~i~~~~y~~~~~~~~~~~C~~~i  474 (514)
                                                   ...+.|..+| ....+|+|+|+|+|++|+|+|++|+.+..+.....|+++|
T Consensus       286 -----------------------------~~~~~~~~~~-~~~~~P~itf~f~g~~~~l~p~~y~~~~~~~~~~~C~~~~  335 (373)
T d1miqa_         286 -----------------------------PFLPFYVTTC-DNKEMPTLEFKSANNTYTLEPEYYMNPILEVDDTLCMITM  335 (373)
T ss_dssp             -----------------------------TTSSCEEEET-TCTTCCCEEEECSSCEEEECGGGSEEESSSSSCSEEEESE
T ss_pred             -----------------------------cCCCeeEecc-ccCCCceEEEEECCEEEEECHHHeeEEEEeCCCCEEEEEE
Confidence                                         1123344444 3468999999999999999999999887666668899999


Q ss_pred             EecccCCCCCCeeeeChhhhcCeEEEEECCCCeEEEEEcC
Q 010230          475 SALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA  514 (514)
Q Consensus       475 ~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~a~  514 (514)
                      ++.+.   .++.||||++|||++|+|||++++|||||+|+
T Consensus       336 ~~~~~---~~~~~ILG~~fl~~~y~vfD~~~~rIGfA~ak  372 (373)
T d1miqa_         336 LPVDI---DSNTFILGDPFMRKYFTVFDYDKESVGFAIAK  372 (373)
T ss_dssp             EECCS---SSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred             EECCC---CCCCEEEcHHhhCcEEEEEECCCCEEEEEEcC
Confidence            87642   34579999999999999999999999999986


No 9  
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]}
Probab=100.00  E-value=7.1e-55  Score=439.02  Aligned_cols=335  Identities=79%  Similarity=1.414  Sum_probs=298.5

Q ss_pred             CccEEeceeccCceEEEEEEecCCCceEEEEeeCCCCceeeeCCCCCCCcccCCCCcccCCCCCcceeCCceEEEEeccc
Q 010230           76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG  155 (514)
Q Consensus        76 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~G  155 (514)
                      +...+||+|+.|.+|+++|.||||||++.|++||||+++||+|+.|..+..|..++.|+|++|+|++..+|.+.+.|++|
T Consensus         3 ~~~~~~l~~y~d~~Y~~~v~iGtP~q~~~l~~DTGS~~~Wv~~~~C~~~~~~~~~~~y~p~~SsT~~~~~~~~~~~y~~g   82 (337)
T d1qdma2           3 EGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTG   82 (337)
T ss_dssp             SSCSGGGCCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGGSCCBCGGGCTTCBCCCCEEEEEETTE
T ss_pred             CCCeEeeeeecCCEEEEEEEEcCCCEEEEEEEECCCcceEEecCCCCCCccccCCCCCCcccCCccccCCceEEEecCCc
Confidence            56679999999999999999999999999999999999999999998777888889999999999999999999999999


Q ss_pred             eEEEEEEEEEEEECceeecccEEEEEEeeCCcccccccceeeeecccccccCCCCCcHHHHHHHcCCCCCCEEEEEecCC
Q 010230          156 AISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRN  235 (514)
Q Consensus       156 ~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l~~~  235 (514)
                      ++.|.++.|++++++..+.++.|++...............|++||+++.........++..+..++.+..+.|++++...
T Consensus        83 s~~G~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~  162 (337)
T d1qdma2          83 SIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRH  162 (337)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC
T ss_pred             eEEEEEEeeeEEEEeeccccceeeeeccccceeecccccccccccccCccccCCCccchhhhhhhhccCCCeEEEEeecC
Confidence            99999999999999999999999988877665555566799999999887766667788899999999999999999887


Q ss_pred             CCCCCCcEEEECccCCCCCccceeEEeccCccceEEEeceEEEcCeeeeeecCCceEEEcCCCCCcccCHHHHHHHHHHh
Q 010230          236 ADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAI  315 (514)
Q Consensus       236 ~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDSGtt~~~lP~~~~~~l~~~l  315 (514)
                      .+....|.|+|||+|+.++.+++.++|+....+|.+.+.++.+++..+.+......++|||||+++++|.+++++|.+++
T Consensus       163 ~~~~~~g~l~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~iiDtgt~~~~l~~~~~~~~~~~l  242 (337)
T d1qdma2         163 VDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKI  242 (337)
T ss_dssp             -----CEEEEETCCCTTSEEEEEEEEEEEEETTEEEEECCEEETTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHH
T ss_pred             CCcccCcceecCCcCccccccceeeeeeccccceeeccceEEECCeEeeecCCCceEEeeccCcceecchHHHHHHHHHh
Confidence            65566899999999999999999999999999999999999999998877777889999999999999999999999999


Q ss_pred             cCccccccchhhhhhhhhHHHHHHhhccCCccchhccCcccccCCCCCcccccccccccCCcCCCCCCCCcccchhHHHH
Q 010230          316 GATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAV  395 (514)
Q Consensus       316 ~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (514)
                      .+..                                                                            
T Consensus       243 ~~~~----------------------------------------------------------------------------  246 (337)
T d1qdma2         243 GAAG----------------------------------------------------------------------------  246 (337)
T ss_dssp             TCCC----------------------------------------------------------------------------
T ss_pred             cccc----------------------------------------------------------------------------
Confidence            7651                                                                            


Q ss_pred             HHHHHhhhhhhhHHHHHHhhhhhcccCCCCCCCeeecCCCCCCCCcEEEEECCEEEEeCcccceeeecCCCCceeeeeeE
Q 010230          396 VWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFS  475 (514)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~gg~~~~i~~~~y~~~~~~~~~~~C~~~i~  475 (514)
                                                  .....+.++|.....+|.|+|+|+|+++.|+|++|+....++....|+++|+
T Consensus       247 ----------------------------~~~~~~~~~~~~~~~~p~itf~f~g~~~~l~~~~~~~~~~~~~~~~C~~~i~  298 (337)
T d1qdma2         247 ----------------------------SPMGESAVDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFT  298 (337)
T ss_dssp             ----------------------------CSSSCCEECGGGGTTCCCEEEEETTEEEEECHHHHEEECSCGGGCCEEESEE
T ss_pred             ----------------------------ccCCcccccccccCCCCceEEEECCEEEEEChHHeEEEeccCCCCEEEEEEE
Confidence                                        0112356678777789999999999999999999999877666678999999


Q ss_pred             ecccCCCCCCeeeeChhhhcCeEEEEECCCCeEEEEEcC
Q 010230          476 ALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA  514 (514)
Q Consensus       476 ~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~a~  514 (514)
                      .++.....++.||||.+|||++|++||++++||||||||
T Consensus       299 ~~~~~~~~~~~~IlG~~fl~~~y~vfD~~~~~igfA~aa  337 (337)
T d1qdma2         299 AMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA  337 (337)
T ss_dssp             ECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred             ecCcCCCCCCcEEEhHHhhcCEEEEEECCCCEEEEEECC
Confidence            887666677889999999999999999999999999997


No 10 
>d1oewa_ b.50.1.2 (A:) Endothiapepsin {Chestnut blight fungus (Endothia parasitica) [TaxId: 5116]}
Probab=100.00  E-value=6.9e-55  Score=439.97  Aligned_cols=319  Identities=28%  Similarity=0.445  Sum_probs=267.0

Q ss_pred             CccEEeceeccCceEEEEEEecCCCceEEEEeeCCCCceeeeCCCCCCCcccCCCCcccCCCCCcceeC-CceEEEEecc
Q 010230           76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKN-GKSADIHYGT  154 (514)
Q Consensus        76 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~-~~~~~~~Y~~  154 (514)
                      +...+|+ ++.|..|+++|.||||||++.|++||||+++||+++.|. ...|..++.|+|++|+|++.. ++.+.+.|++
T Consensus         4 ~~~~~p~-~~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~-~~~c~~~~~y~~~~SsT~~~~~~~~~~~~Y~~   81 (330)
T d1oewa_           4 SATTTPI-DSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETT-ASEVDGQTIYTPSKSTTAKLLSGATWSISYGD   81 (330)
T ss_dssp             EEEEEES-STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-GGGC--CCCBCGGGCTTCEEEEEEEEEEECTT
T ss_pred             ccccccc-cccCCEEEEEEEEcCCCeEEEEEEECCccceEEECCCCC-chhhcCCCccCccccccccccCCCeEEEEeCC
Confidence            4567888 566889999999999999999999999999999999997 557888899999999999885 5689999999


Q ss_pred             ce-EEEEEEEEEEEECceeecccEEEEEEeeCCcccccccceeeeecccccccCCC---CCcHHHHHHHcCCCCCCEEEE
Q 010230          155 GA-ISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGK---AVPVWYNMVNQGLVNEPVFSF  230 (514)
Q Consensus       155 G~-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~---~~~~~~~l~~qg~i~~~~FSl  230 (514)
                      |+ +.|.++.|+|++++..+.++.|+++.......+.....+||||||++..+...   ..++++.+  ++.|..++||+
T Consensus        82 G~~~~G~~~~D~v~~~~~~~~~~~f~~~~~~~~~~~~~~~~~GilGlg~~~~~~~~~~~~~~~~~~~--~~~i~~~~fs~  159 (330)
T d1oewa_          82 GSSSSGDVYTDTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNA--KASLDSPVFTA  159 (330)
T ss_dssp             SCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHH--TTTSSSSEEEE
T ss_pred             CCcEEEEEEEEEEEeecceecceEEEEeeeccccccccCCcccccccccCcccccCccccccHHHhh--hhhhcccceee
Confidence            96 89999999999999999999999999876554556678999999988765322   23344443  68899999999


Q ss_pred             EecCCCCCCCCcEEEECccCCCCCccceeEEecc-CccceEEEeceEEEcCeeeeeecCCceEEEcCCCCCcccCHHHHH
Q 010230          231 WFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVT-QKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIIT  309 (514)
Q Consensus       231 ~l~~~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDSGtt~~~lP~~~~~  309 (514)
                      +|.+..    .|.|+|||+|++++.|++.|+|+. ..++|.|.+++|.+++..+.  .....++|||||+++++|.++++
T Consensus       160 ~l~~~~----~g~l~~Gg~d~~~~~g~~~~~~~~~~~~~~~v~l~~i~v~~~~~~--~~~~~~iiDSGts~~~lp~~~~~  233 (330)
T d1oewa_         160 DLGYHA----PGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFK--STSIDGIADTGTTLLYLPATVVS  233 (330)
T ss_dssp             ECCSSS----CEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCE--EEEEEEEECTTCCSEEECHHHHH
T ss_pred             eccccc----CCceeecccccccccCcceeeeccCCCCceEEEEeEEEEEeeeee--cCCcceeeccccccccCCHHHHH
Confidence            998764    799999999999999999999986 46799999999999998764  34567999999999999999999


Q ss_pred             HHHHHhcCccccccchhhhhhhhhHHHHHHhhccCCccchhccCcccccCCCCCcccccccccccCCcCCCCCCCCcccc
Q 010230          310 QVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCS  389 (514)
Q Consensus       310 ~l~~~l~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (514)
                      +|+++++....                                                                     
T Consensus       234 ~i~~~~~~~~~---------------------------------------------------------------------  244 (330)
T d1oewa_         234 AYWAQVSGAKS---------------------------------------------------------------------  244 (330)
T ss_dssp             HHHTTSTTCEE---------------------------------------------------------------------
T ss_pred             HHHHHccCccc---------------------------------------------------------------------
Confidence            99988754310                                                                     


Q ss_pred             hhHHHHHHHHHhhhhhhhHHHHHHhhhhhcccCCCCCCCeeecCCCCCCCCcEEEEECCEEEEeCcccceeeecCCCCce
Q 010230          390 TCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQ  469 (514)
Q Consensus       390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~gg~~~~i~~~~y~~~~~~~~~~~  469 (514)
                                                       ....+.|.++|+  ..+|.|+|+|+|.++.||++.|+..........
T Consensus       245 ---------------------------------~~~~~~~~~~C~--~~~P~i~f~f~g~~~~lp~~~~~~~~~~~~~~~  289 (330)
T d1oewa_         245 ---------------------------------SSSVGGYVFPCS--ATLPSFTFGVGSARIVIPGDYIDFGPISTGSSS  289 (330)
T ss_dssp             ---------------------------------ETTTTEEEEETT--CCCCCEEEEETTEEEEECHHHHEEEESSTTCSE
T ss_pred             ---------------------------------CcccceEEeccc--CCCCcEEEEECCEEEecCHHHeeEEEecCCCCE
Confidence                                             123467899998  579999999999999998877766555555678


Q ss_pred             eeeeeEecccCCCCCCeeeeChhhhcCeEEEEEC-CCCeEEEEE
Q 010230          470 CISGFSALDVAPPRGPLWILGDVFMGPYHTVFDY-SNMRVGFAE  512 (514)
Q Consensus       470 C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~-~~~riGfa~  512 (514)
                      |+++|+..    ...+.+|||++|||++|+|||. +|.|||||.
T Consensus       290 C~~~i~~~----~~~~~~ILG~~flr~~y~vfD~~~~~~IGfA~  329 (330)
T d1oewa_         290 CFGGIQSS----AGIGINIFGDVALKAAFVVFNGATTPTLGFAS  329 (330)
T ss_dssp             EEESEEES----TTTSSEEECHHHHTTEEEEEECSSSCEEEEEE
T ss_pred             EEEEEECC----CCCCCEEECHHHhCCEEEEEECCCCCEEEEec
Confidence            99988753    2345789999999999999998 667899996


No 11 
>g1lya.1 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.5e-54  Score=434.07  Aligned_cols=333  Identities=52%  Similarity=0.963  Sum_probs=292.5

Q ss_pred             ccEEeceeccCceEEEEEEecCCCceEEEEeeCCCCceeeeCCCCCCC-cccCCCCcccCCCCCcceeCCceEEEEeccc
Q 010230           77 ADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFS-IACYFHSKYRSGRSSTYKKNGKSADIHYGTG  155 (514)
Q Consensus        77 ~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~C~~~-~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~G  155 (514)
                      ...+||+|+.|.+|+++|+||||||++.|++||||+++||+|++|..+ ..|..++.|++++|+||+..+|.+.+.|++|
T Consensus         2 ~~~~~l~~~~d~~Y~~~i~iGtP~q~~~~~~DTGS~~~Wv~~~~C~~~~~~~~~~~~yn~~~SsT~~~~~~~~~~~y~~g   81 (338)
T g1lya.1           2 PIPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSG   81 (338)
T ss_dssp             CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSC
T ss_pred             CCCccceecCCcEEEEEEEEcCCCeEEEEEEECCCcceEEecCCCCCcccccccCCCCCcccCccccCCCcceEEeccce
Confidence            356899999999999999999999999999999999999999999742 3467889999999999999999999999999


Q ss_pred             eEEEEEEEEEEEECc---eeecccEEEEEEeeCCcccccccceeeeecccccccCCCCCcHHHHHHHcCCCCCCEEEEEe
Q 010230          156 AISGFFSEDHVKIGD---LVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWF  232 (514)
Q Consensus       156 ~~~G~~~~D~v~ig~---~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l  232 (514)
                      ++.|.++.|++++++   ..+.++.+++........+....++||||||++..+.....+++..+..++.|....|++++
T Consensus        82 s~~G~~~~D~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~~~~~~~~~~~~l~~~~~i~~~~~s~~~  161 (338)
T g1lya.1          82 SLSGYLSQDTVSVPCQGGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYL  161 (338)
T ss_dssp             EEEEEEEEEEEEESCCCCEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEE
T ss_pred             EEEEEEEEEEEEECCcCceeeeeeEEEEecccccccccccccccccccCCCccccCCcCcHhHhhHhhcccccccceeEe
Confidence            999999999999974   56677777777766555455667899999999887777777899999999999999999999


Q ss_pred             cCCCCCCCCcEEEECccCCCCCccceeEEeccCccceEEEeceEEEcCeeeeeecCCceEEEcCCCCCcccCHHHHHHHH
Q 010230          233 NRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVN  312 (514)
Q Consensus       233 ~~~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDSGtt~~~lP~~~~~~l~  312 (514)
                      .........|.|+||++|+.++.+++.|.|+....+|.+.+.++.+++.... ......++||||+++++||.+++++|.
T Consensus       162 ~~~~~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~iDsgt~~~~lp~~~~~~l~  240 (338)
T g1lya.1         162 SRDPDAQPGGELMLGGTDSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTL-CKEGCEAIVDTGTSLMVGPVDEVRELQ  240 (338)
T ss_dssp             CSSTTCSSCEEEEETSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTSCEE-STTCEEEEECTTCSSEEECHHHHHHHH
T ss_pred             ccCCCCCCCceEEcCCcCcccccccceeccccccceeEEeeeeEEECCceee-cCCCeeEEeecCcceecCCHHHHHHHH
Confidence            8765555679999999999999999999999999999999999999988764 456788999999999999999999999


Q ss_pred             HHhcCccccccchhhhhhhhhHHHHHHhhccCCccchhccCcccccCCCCCcccccccccccCCcCCCCCCCCcccchhH
Q 010230          313 HAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCE  392 (514)
Q Consensus       313 ~~l~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (514)
                      +++++..                                                                         
T Consensus       241 ~~l~~~~-------------------------------------------------------------------------  247 (338)
T g1lya.1         241 KAIGAVP-------------------------------------------------------------------------  247 (338)
T ss_dssp             HHHTCEE-------------------------------------------------------------------------
T ss_pred             HHHhhee-------------------------------------------------------------------------
Confidence            9997651                                                                         


Q ss_pred             HHHHHHHHhhhhhhhHHHHHHhhhhhcccCCCCCCCeeecCCCCCCCCcEEEEECCEEEEeCcccceeeecCCCCceeee
Q 010230          393 MAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCIS  472 (514)
Q Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~gg~~~~i~~~~y~~~~~~~~~~~C~~  472 (514)
                                                     ...+.+.+.|.....+|.|+|+|+|.+++|+|++|++...+.+...|+.
T Consensus       248 -------------------------------~~~~~~~~~~~~~~~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~  296 (338)
T g1lya.1         248 -------------------------------LIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLS  296 (338)
T ss_dssp             -------------------------------EETTEEEEEGGGGGGSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEE
T ss_pred             -------------------------------ccCCceeeeccccCCCceEEEEECCEEEEEChHHeEEEEccCCCcEEEE
Confidence                                           0123355566666789999999999999999999999888777789999


Q ss_pred             eeEecccCCCCCCeeeeChhhhcCeEEEEECCCCeEEEEEcC
Q 010230          473 GFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA  514 (514)
Q Consensus       473 ~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~a~  514 (514)
                      .|+..+.+...++.+|||.+|||++|++||++++||||||||
T Consensus       297 ~~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~igfa~aa  338 (338)
T g1lya.1         297 GFMGMDIPPPSGPLWILGDVFIGRYYTVFDRDNNRVGFAEAA  338 (338)
T ss_dssp             SEEECCCCTTTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred             EEEecccCCCCCCcEEEhHHhhccEEEEEECCCCEEEEEECC
Confidence            999887666667789999999999999999999999999997


No 12 
>g1b5f.1 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin {Cynara cardunculus [TaxId: 4265]}
Probab=100.00  E-value=1.7e-53  Score=427.64  Aligned_cols=325  Identities=71%  Similarity=1.198  Sum_probs=292.5

Q ss_pred             ccEEeceeccCceEEEEEEecCCCceEEEEeeCCCCceeeeCCCCCCCcccCCCCcccCCCCCcceeCCceEEEEeccce
Q 010230           77 ADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA  156 (514)
Q Consensus        77 ~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~G~  156 (514)
                      ...++|.|..|.+|+++|.||||||++.|++||||+++||+|..|..+..|..++.|+|.+|++++..++.+...|++|+
T Consensus         2 ~~~~~~~~~~d~~Y~~~i~IGtP~Q~~~l~~DTGS~~~Wv~~~~C~~~~~c~~~~~yn~~~S~t~~~~~~~~~~~y~~g~   81 (326)
T g1b5f.1           2 SAVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKENGTFGAIIYGTGS   81 (326)
T ss_dssp             CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred             CceeeeeeccCCEEEEEEEECCCCeEEEEEEECCCcceEEecCCCCCCccccCCCcCCCccCcccccCCcceEEEecCcc
Confidence            35689999999999999999999999999999999999999999987778888999999999999999999999999999


Q ss_pred             EEEEEEEEEEEECceeecccEEEEEEeeCCcccccccceeeeecccccccCCCCCcHHHHHHHcCCCCCCEEEEEecCCC
Q 010230          157 ISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNA  236 (514)
Q Consensus       157 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l~~~~  236 (514)
                      +.|.+++|++++++..+..+.++++.......+.....+|++|||+...+    .+++.+|..++.|.++.|++++....
T Consensus        82 ~~G~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~Gl~~~~~~----~~~~~~l~~~~~i~~~~~s~~~~~~~  157 (326)
T g1b5f.1          82 ITGFFSQDSVTIGDLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTIS----VPVWYNMLNQGLVKERRFSFWLNRNV  157 (326)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSS----CCHHHHHHHTTCCSSSEEEEEECCSC
T ss_pred             eEEEEEeeccEeecceeccceeEEEEeeeccccccccccccccccccccc----cChhHhhhhccccCCceeeEEEecCC
Confidence            99999999999999999989999888766655566778999999987654    36889999999999999999998776


Q ss_pred             CCCCCcEEEECccCCCCCccceeEEeccCccceEEEeceEEEcCeeeeeecCCceEEEcCCCCCcccCHHHHHHHHHHhc
Q 010230          237 DEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIG  316 (514)
Q Consensus       237 ~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDSGtt~~~lP~~~~~~l~~~l~  316 (514)
                      +....|.|+|||+|..++.++++|+|+....+|.+.+.++.+++..+........+++|||++++++|.++++++.++++
T Consensus       158 ~~~~~~~l~~G~~d~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dsgt~~~~lp~~~~~~~~~~~~  237 (326)
T g1b5f.1         158 DEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIG  237 (326)
T ss_dssp             SSSCCEEEEETSCCGGGEEEEEEEEEEEEETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHHHHHHHHHHTT
T ss_pred             CCCCCeEEEcCCCCchhccceeEEEeecCCCceEEEeccEEeccceeeecCCCceEEeeCCCceEEcChHHHHHHHHhhC
Confidence            55568899999999999999999999999999999999999999988766778899999999999999999999999887


Q ss_pred             CccccccchhhhhhhhhHHHHHHhhccCCccchhccCcccccCCCCCcccccccccccCCcCCCCCCCCcccchhHHHHH
Q 010230          317 ATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVV  396 (514)
Q Consensus       317 ~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (514)
                      +.                                                                              
T Consensus       238 ~~------------------------------------------------------------------------------  239 (326)
T g1b5f.1         238 AN------------------------------------------------------------------------------  239 (326)
T ss_dssp             CC------------------------------------------------------------------------------
T ss_pred             Cc------------------------------------------------------------------------------
Confidence            55                                                                              


Q ss_pred             HHHHhhhhhhhHHHHHHhhhhhcccCCCCCCCeeecCCCCCCCCcEEEEECCEEEEeCcccceeeecCCCCceeeeeeEe
Q 010230          397 WMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSA  476 (514)
Q Consensus       397 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~gg~~~~i~~~~y~~~~~~~~~~~C~~~i~~  476 (514)
                                                    ..|.++|+....+|.|+|+|+|+++.|+|++|+++..++....|+.+|..
T Consensus       240 ------------------------------~~~~~~C~~~~~~p~itf~f~g~~~~i~~~~y~~~~~~~~~~~C~~~i~~  289 (326)
T g1b5f.1         240 ------------------------------EELQVDCNTLSSMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCISGFTA  289 (326)
T ss_dssp             ------------------------------CCCEECGGGGGGCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEESEEE
T ss_pred             ------------------------------eeEEccccCCCCCCcEEEEECCEEEEECHHHeEEEecCCCCCEEEEEEEe
Confidence                                          23668898777899999999999999999999998777767899999987


Q ss_pred             cccCCCCCCeeeeChhhhcCeEEEEECCCCeEEEEEcC
Q 010230          477 LDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA  514 (514)
Q Consensus       477 ~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~a~  514 (514)
                      .+. ...++.+|||.+|||++|+|||++++||||||||
T Consensus       290 ~~~-~~~~~~~ilG~~fl~~~yvvfD~~~~~igfA~aa  326 (326)
T g1b5f.1         290 MDA-TLLGPLWILGDVFMRPYHTVFDYGNLLVGFAEAA  326 (326)
T ss_dssp             CCC-BSSSBEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred             CCC-CCCCCcEEECHHHhCCEEEEEECCCCEEEEEECC
Confidence            652 2344678999999999999999999999999997


No 13 
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]}
Probab=100.00  E-value=1.6e-53  Score=434.33  Aligned_cols=326  Identities=29%  Similarity=0.491  Sum_probs=277.3

Q ss_pred             ccEEeceeccCceEEEEEEecCCCceEEEEeeCCCCceeeeCCCCCCCcccCCCCcccCCCCCcceeCCceEEEEeccce
Q 010230           77 ADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA  156 (514)
Q Consensus        77 ~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~G~  156 (514)
                      .....|.|+.+.+|+++|+||||||++.|+|||||+++||+|..|..+..|..++.|+|++|+||+..++.+.+.|++|+
T Consensus         3 ~~~~~~~~~~~~~Y~~~i~iGtP~Q~~~~ivDTGSs~~wv~~~~C~~~~~c~~~~~f~~~~SsT~~~~~~~~~~~y~~g~   82 (357)
T d1mppa_           3 VDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETDYNLNITYGTGG   82 (357)
T ss_dssp             EEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred             ccccceecCCCCEEEEEEEEcCCCeEEEEEEeCCCcceEEccCCCCCCccccCCCCCCCccCCccccCCcceEEecCCCc
Confidence            34556999999999999999999999999999999999999999987778999999999999999999999999999999


Q ss_pred             EEEEEEEEEEEECceeecccEEEEEEeeCCcc-----cccccceeeeecccccccC------CCCCcHHHHHHHcCCCCC
Q 010230          157 ISGFFSEDHVKIGDLVVKDQEFIEATREPSLT-----FLLAKFDGILGLGFQEISV------GKAVPVWYNMVNQGLVNE  225 (514)
Q Consensus       157 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~-----~~~~~~~GilGLg~~~~s~------~~~~~~~~~l~~qg~i~~  225 (514)
                      +.|.+++|++.+++..++++.|++++......     ......+|++|||+...+.      ....+++.+|++||+|++
T Consensus        83 ~~G~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~  162 (357)
T d1mppa_          83 ANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISS  162 (357)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSS
T ss_pred             EEEEEEeeecccccceECcEEEEEEEeecccceecccccccccccccccccCCccccccccCCCCCCHHHHHHhcccccc
Confidence            99999999999999999999999998764421     2344678999999876542      345679999999999999


Q ss_pred             CEEEEEecCCCCCCCCcEEEECccCCCCCccceeEEeccCc----cceEEEeceEEEcCeeeeeecCCceEEEcCCCCCc
Q 010230          226 PVFSFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQK----GYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLL  301 (514)
Q Consensus       226 ~~FSl~l~~~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~----~~w~v~l~~i~v~~~~~~~~~~~~~aiiDSGtt~~  301 (514)
                      ++||+||++..+   .|.|+|||+|+.++.+++.|+|+...    .+|.|.+++|.+++...........++|||||+++
T Consensus       163 ~~fs~~l~~~~~---~G~l~~Gg~d~~~~~~~~~~~pi~~~~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~ilDSGts~~  239 (357)
T d1mppa_         163 PVFSVYMNTNDG---GGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAVSFDGAQAFTIDTGTNFF  239 (357)
T ss_dssp             SEEEEECCCSSS---EEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTCCSE
T ss_pred             ceEEEEeccCCC---CceEECcccChhHcCCceeEEEeccCCCCceeEEEEEeeEEECCeEeeecCCCcceEeeccCccc
Confidence            999999976532   79999999999999999999999653    37999999999999877655556789999999999


Q ss_pred             ccCHHHHHHHHHHhcCccccccchhhhhhhhhHHHHHHhhccCCccchhccCcccccCCCCCcccccccccccCCcCCCC
Q 010230          302 AGPTTIITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASG  381 (514)
Q Consensus       302 ~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  381 (514)
                      +||++++++|++++.+...                                                             
T Consensus       240 ~lp~~~~~~i~~~~~~~~~-------------------------------------------------------------  258 (357)
T d1mppa_         240 IAPSSFAEKVVKAALPDAT-------------------------------------------------------------  258 (357)
T ss_dssp             EEEHHHHHHHHHHHCTTCE-------------------------------------------------------------
T ss_pred             cCCHHHHHHHHHHhcCCcc-------------------------------------------------------------
Confidence            9999999999999976510                                                             


Q ss_pred             CCCCcccchhHHHHHHHHHhhhhhhhHHHHHHhhhhhcccCCCCCCCeeecCCCC-CCCCcEEEEECC-------EEEEe
Q 010230          382 GFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRL-SSLPIVSFTIGG-------KIFDL  453 (514)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~-~~~P~i~f~~gg-------~~~~i  453 (514)
                                                                ...+.|.+||+.. ...|.++|.|++       .++.|
T Consensus       259 ------------------------------------------~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (357)
T d1mppa_         259 ------------------------------------------ESQQGYTVPCSKYQDSKTTFSLVLQKSGSSSDTIDVSV  296 (357)
T ss_dssp             ------------------------------------------EETTEEEEEHHHHTTCCCEEEEEEECTTCSSCEEEEEE
T ss_pred             ------------------------------------------ccCCceecccccccccCceEEEEEeccccccccEEEEE
Confidence                                                      1234578888643 467888888842       58999


Q ss_pred             CcccceeeecCCCCceeeeeeEecccCCCCCCeeeeChhhhcCeEEEEECCCCeEEEEEcC
Q 010230          454 TPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA  514 (514)
Q Consensus       454 ~~~~y~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~a~  514 (514)
                      |+++|+..... ....|++.++..     .++.+|||.+|||++|+|||++++||||||+|
T Consensus       297 p~~~~~~~~~~-~~~~c~~~~~~~-----~~~~~ILG~~fl~~~yvvfD~~~~~iGfA~~~  351 (357)
T d1mppa_         297 PISKMLLPVDK-SGETCMFIVLPD-----GGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLA  351 (357)
T ss_dssp             EGGGGEEECSS-SSCEEEESEEEE-----SSSCCEEEHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred             chHHeEEEecC-CCCEEEEEEcCC-----CCCCEEechHHhCCEEEEEECCCCEEEEEECC
Confidence            99999987643 346899888742     34578999999999999999999999999986


No 14 
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]}
Probab=100.00  E-value=5.7e-53  Score=426.58  Aligned_cols=309  Identities=26%  Similarity=0.409  Sum_probs=264.6

Q ss_pred             EEeceeccCceEEEEEEecCCCceEEEEeeCCCCceeeeCCCCC--------CCcccCCCCcccCCCCCcceeCCceEEE
Q 010230           79 IVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCY--------FSIACYFHSKYRSGRSSTYKKNGKSADI  150 (514)
Q Consensus        79 ~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~C~--------~~~~C~~~~~y~~~~SsT~~~~~~~~~~  150 (514)
                      .+++.|. +..|+++|.||||||++.|++||||+++||++..|.        ....|..++.|+|++|+|++..++.+.+
T Consensus         4 p~~~~~~-~~~Y~~~i~iGtP~q~~~~i~DTGS~~~Wv~~~~~~c~~~~~~~~~~~c~~~~~y~~~~SsT~~~~~~~~~~   82 (334)
T d1j71a_           4 PTTLINE-GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLNQDFSI   82 (334)
T ss_dssp             EEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEEEEEEE
T ss_pred             ceeeccC-CCEEEEEEEEcCCCeEEEEEEECCCcceEEeeCCCCccccccccCCcccccCCcCCcccCCcccCCCcCEEE
Confidence            3566664 688999999999999999999999999999876532        1345777789999999999999999999


Q ss_pred             Eeccc-eEEEEEEEEEEEECceeecccEEEEEEeeCCcccccccceeeeecccccccC--CCCCcHHHHHHHcCCCCCCE
Q 010230          151 HYGTG-AISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISV--GKAVPVWYNMVNQGLVNEPV  227 (514)
Q Consensus       151 ~Y~~G-~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~--~~~~~~~~~l~~qg~i~~~~  227 (514)
                      .|++| ++.|.++.|+++|++.+++++.|+++.....       .+|++|||+...+.  ....+++.+|++||.|.+++
T Consensus        83 ~Y~~g~~~~G~~~~D~~~~g~~~~~~~~f~~~~~~~~-------~~GilGlg~~~~~~~~~~~~~~~~~l~~q~~i~~~~  155 (334)
T d1j71a_          83 EYGDLTSSQGSFYKDTVGFGGISIKNQQFADVTTTSV-------DQGIMGIGFTADEAGYNLYDNVPVTLKKQGIINKNA  155 (334)
T ss_dssp             EBTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEESS-------SSCEEECSCGGGSSTTCCCCCHHHHHHHTTSCSSSE
T ss_pred             EeCCCceEEEEEEeeEEEEeeeeccCceeeeeeeecc-------ccCccccccccccccccccchhhHHHHhccccccce
Confidence            99985 5899999999999999999999999987654       38999999987653  23456899999999999999


Q ss_pred             EEEEecCCCCCCCCcEEEECccCCCCCccceeEEeccCccceEEEeceEEEcCeeeeeecCCceEEEcCCCCCcccCHHH
Q 010230          228 FSFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTI  307 (514)
Q Consensus       228 FSl~l~~~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDSGtt~~~lP~~~  307 (514)
                      ||+|+.+...  ..|.|+|||+|+.++.|++.|+|+.+..+|.+++++|.+++..+.   .+..++|||||+++++|+++
T Consensus       156 fs~~l~~~~~--~~g~l~lGg~d~~~~~g~~~~~~~~~~~~~~v~l~~i~v~g~~~~---~~~~aiiDSGt~~~~lp~~~  230 (334)
T d1j71a_         156 YSLYLNSEDA--STGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVS---TNADVVLDSGTTITYFSQST  230 (334)
T ss_dssp             EEEECCCTTC--SEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEE---EEEEEEECTTCSSEEECHHH
T ss_pred             EEEEeccCCC--CCceEEecccChhhcccceeEeeeccccceEEeeceEEECCEEec---ccccccccCCCcceeccHHH
Confidence            9999987642  379999999999999999999999999999999999999999875   35679999999999999999


Q ss_pred             HHHHHHHhcCccccccchhhhhhhhhHHHHHHhhccCCccchhccCcccccCCCCCcccccccccccCCcCCCCCCCCcc
Q 010230          308 ITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAM  387 (514)
Q Consensus       308 ~~~l~~~l~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (514)
                      +++|++.+++...                                                                   
T Consensus       231 ~~~l~~~~~~~~~-------------------------------------------------------------------  243 (334)
T d1j71a_         231 ADKFARIVGATWD-------------------------------------------------------------------  243 (334)
T ss_dssp             HHHHHHHHTCEEE-------------------------------------------------------------------
T ss_pred             HHHHHHHhCCEEc-------------------------------------------------------------------
Confidence            9999999976510                                                                   


Q ss_pred             cchhHHHHHHHHHhhhhhhhHHHHHHhhhhhcccCCCCCCCeeecCCCCCCCCcEEEEE-CCEEEEeCcccceeeecCCC
Q 010230          388 CSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTI-GGKIFDLTPDQYILKVGEGD  466 (514)
Q Consensus       388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~-gg~~~~i~~~~y~~~~~~~~  466 (514)
                                                          ...+.|.++|.  ...|.++|+| +|++|+|||++|+++..+  
T Consensus       244 ------------------------------------~~~~~~~~~~~--~~~p~i~f~f~~g~~~~i~~~~y~~~~~~--  283 (334)
T d1j71a_         244 ------------------------------------SRNEIYRLPSC--DLSGDAVFNFDQGVKITVPLSELILKDSD--  283 (334)
T ss_dssp             ------------------------------------TTTTEEECSSS--CCCSEEEEEESTTCEEEEEGGGGEEECSS--
T ss_pred             ------------------------------------CCCCeeecccc--ccCCCceEEeCCCEEEEEChHHeEEecCC--
Confidence                                                11234677776  3679999999 479999999999987543  


Q ss_pred             CceeeeeeEecccCCCCCCeeeeChhhhcCeEEEEECCCCeEEEEEcC
Q 010230          467 AAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA  514 (514)
Q Consensus       467 ~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~a~  514 (514)
                      ...|+++|+..       +.||||.+|||++|++||++|+|||||+++
T Consensus       284 ~~~C~~~i~~~-------~~~ILG~~fl~~~y~vfD~~n~~iGfA~~~  324 (334)
T d1j71a_         284 SSICYFGISRN-------DANILGDNFLRRAYIVYDLDDKTISLAQVK  324 (334)
T ss_dssp             SSCEEESEEEC-------TTCEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred             CCEEEEEecCC-------CCcEECHHhhCcEEEEEECCCCEEEEEECC
Confidence            36899888742       358999999999999999999999999974


No 15 
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]}
Probab=100.00  E-value=4.6e-52  Score=417.71  Aligned_cols=324  Identities=32%  Similarity=0.597  Sum_probs=279.3

Q ss_pred             CccEEeceeccCceEEEEEEecCCCceEEEEeeCCCCceeeeCCCCCCCcccCCCCcccCCCCCcceeCCceEEEEeccc
Q 010230           76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG  155 (514)
Q Consensus        76 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~G  155 (514)
                      ....++|.|+.|..|+++|.||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||++.++.+.+.|++|
T Consensus         2 ~~~~~~l~~~~~~~Y~~~v~iGtP~q~~~~~~DTGS~~~Wv~~~~C~-~~~~~~~~~y~~~~SsT~~~~~~~~~~~Y~~g   80 (329)
T d2bjua1           2 SNDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCT-TAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSG   80 (329)
T ss_dssp             CSEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-STTGGGSCCBCGGGCTTCEEEEEEEEEECSSS
T ss_pred             CCCcEEeEEecCCEEEEEEEECCCCEEEEEEEECCCcceEEECCCCC-CccccCCCCCCcccCCCccCCCccEEEEcCCC
Confidence            34678899999999999999999999999999999999999999997 45677889999999999999999999999999


Q ss_pred             eEEEEEEEEEEEECceeecccEEEEEEeeCC-cccccccceeeeecccccccCCCCCcHHHHHHHcCCCCCCEEEEEecC
Q 010230          156 AISGFFSEDHVKIGDLVVKDQEFIEATREPS-LTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNR  234 (514)
Q Consensus       156 ~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~-~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l~~  234 (514)
                      ++.|.++.|++++++.++.++.++++..... ..+.....+|++|+++..........++..+..++.+.++.|++|+.+
T Consensus        81 ~~~G~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~fs~~l~~  160 (329)
T d2bjua1          81 TVSGFFSKDLVTVGNLSLPYKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLPV  160 (329)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECCB
T ss_pred             cEEEEEEEeeeeeeeeeeccceEEEEEeeccCccccccccCccccccccccccCCccccchhhhhhhccccceeeEEecC
Confidence            9999999999999999999888888775432 223455679999999887777777789999999999999999999987


Q ss_pred             CCCCCCCcEEEECccCCCCCccceeEEeccCccceEEEeceEEEcCeeeeeecCCceEEEcCCCCCcccCHHHHHHHHHH
Q 010230          235 NADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHA  314 (514)
Q Consensus       235 ~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDSGtt~~~lP~~~~~~l~~~  314 (514)
                      ...  ..|.|+|||+|+.++.|++.|+|+....+|.+.++.+.++...     ....++|||||++++||.+++++|+++
T Consensus       161 ~~~--~~g~l~~gg~d~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~-----~~~~~~iDSGt~~~~lp~~~~~~l~~~  233 (329)
T d2bjua1         161 HDK--HTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLDAHVGNIML-----EKANCIVDSGTSAITVPTDFLNKMLQN  233 (329)
T ss_dssp             TTT--BCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEEEEETTEEE-----EEEEEEECTTCCSEEECHHHHHHHTTT
T ss_pred             CcC--CcceeeecCCCcccccCceEEEeeeeeeeEEEEEeeeEeeeEc-----cCCcccccccccceeCCHHHHHHHHHH
Confidence            643  3799999999999999999999999999999999887654332     345799999999999999999999988


Q ss_pred             hcCccccccchhhhhhhhhHHHHHHhhccCCccchhccCcccccCCCCCcccccccccccCCcCCCCCCCCcccchhHHH
Q 010230          315 IGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMA  394 (514)
Q Consensus       315 l~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (514)
                      +++...                                                                          
T Consensus       234 ~~~~~~--------------------------------------------------------------------------  239 (329)
T d2bjua1         234 LDVIKV--------------------------------------------------------------------------  239 (329)
T ss_dssp             SSCEEC--------------------------------------------------------------------------
T ss_pred             hCCeec--------------------------------------------------------------------------
Confidence            876510                                                                          


Q ss_pred             HHHHHHhhhhhhhHHHHHHhhhhhcccCCCCCCCeeecCCCCCCCCcEEEEECCEEEEeCcccceeeecCCCCceeeeee
Q 010230          395 VVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGF  474 (514)
Q Consensus       395 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~gg~~~~i~~~~y~~~~~~~~~~~C~~~i  474 (514)
                                                   ...+.|...|+ ...+|.++|+|+|.+++|+|++|+.+..+...+.|+++|
T Consensus       240 -----------------------------~~~~~~~~~~~-~~~~p~~~f~~~g~~~~i~p~~y~~~~~~~~~~~C~~~i  289 (329)
T d2bjua1         240 -----------------------------PFLPFYVTLCN-NSKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCMLNI  289 (329)
T ss_dssp             -----------------------------TTSSCEEEETT-CTTCCCEEEECSSCEEEECHHHHEEECTTTSTTEEEECE
T ss_pred             -----------------------------CCCCeeEeecc-cCCCCceeEEeCCEEEEECHHHhEEEeecCCCCEEEEEE
Confidence                                         11234555565 367999999999999999999999987777778999999


Q ss_pred             EecccCCCCCCeeeeChhhhcCeEEEEECCCCeEEEEEcC
Q 010230          475 SALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA  514 (514)
Q Consensus       475 ~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~a~  514 (514)
                      +..+   ...+.||||.+|||++|+|||++++|||||||+
T Consensus       290 ~~~~---~~~~~~IlG~~fl~~~y~vfD~~~~~iGfA~a~  326 (329)
T d2bjua1         290 IGLD---FPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK  326 (329)
T ss_dssp             EECC---CSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred             EECC---CCCCCEEEchHhhCcEEEEEECCCCEEEEEEec
Confidence            8754   234679999999999999999999999999985


No 16 
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]}
Probab=100.00  E-value=7.4e-52  Score=419.44  Aligned_cols=314  Identities=25%  Similarity=0.418  Sum_probs=263.2

Q ss_pred             EEeceeccCceEEEEEEecCCCceEEEEeeCCCCceeeeCCCCC--------CCcccCCCCcccCCCCCcceeCCceEEE
Q 010230           79 IVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCY--------FSIACYFHSKYRSGRSSTYKKNGKSADI  150 (514)
Q Consensus        79 ~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~C~--------~~~~C~~~~~y~~~~SsT~~~~~~~~~~  150 (514)
                      .++|.| .+..|+++|.||||||++.|++||||+++||+|..|.        ....|..++.|+|++|+|++..++.+.+
T Consensus         4 p~~l~~-~~~~Y~~~i~iGtP~Q~~~~i~DTGS~~~Wv~~~~~~c~~~~~~~~~~~~~~~~~y~~~~Sst~~~~~~~~~~   82 (342)
T d1eaga_           4 PVTLHN-EQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLNTPFKI   82 (342)
T ss_dssp             EEEEEE-CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEEEEEEE
T ss_pred             eeEecC-CCcEEEEEEEECCCCeEEEEEEECCCcceEEeecCCCccccccccCccccccCCcCCCccCcceeECCeeEEE
Confidence            466777 4889999999999999999999999999999887542        1345667789999999999999999999


Q ss_pred             Eeccce-EEEEEEEEEEEECceeecccEEEEEEeeCCcccccccceeeeecccccccCC-CCCcHHHHHHHcCCCCCCEE
Q 010230          151 HYGTGA-ISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVG-KAVPVWYNMVNQGLVNEPVF  228 (514)
Q Consensus       151 ~Y~~G~-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~-~~~~~~~~l~~qg~i~~~~F  228 (514)
                      .|++|+ +.|.++.|+++|++.+++++.|+++.....       .+|++|||++..... ...+++.+|++|+.|.+++|
T Consensus        83 ~Y~~g~~~~G~~~~d~~~~~~~~~~~~~~~~~~~~~~-------~~g~~Glg~~~~~~~~~~~~~~~~L~~q~~i~~~~f  155 (342)
T d1eaga_          83 GYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDSTSI-------DQGILGVGYKTNEAGGSYDNVPVTLKKQGVIAKNAY  155 (342)
T ss_dssp             ECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEESS-------SSCEEECSCGGGCSSCSCCCHHHHHHHTTSSSSSEE
T ss_pred             EeCCCceEEEEEEeeEEEeceEeeeeeEEEeeceeec-------ccccccccccccccCCccCccceehhhcCCccceEE
Confidence            999997 689999999999999999999999986543       379999998876543 34578999999999999999


Q ss_pred             EEEecCCCCCCCCcEEEECccCCCCCccceeEEeccCccceEEEeceEEEcCeeeeeecCCceEEEcCCCCCcccCHHHH
Q 010230          229 SFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTII  308 (514)
Q Consensus       229 Sl~l~~~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDSGtt~~~lP~~~~  308 (514)
                      |+|+.+.+.  ..|.|+|||+|+.++.|++.|+|+..+.+|.+.+++|.+++..+.  ..+..+||||||+++++|.+++
T Consensus       156 s~~l~~~~~--~~G~l~~Gg~d~~~~~g~~~~~p~~~~~~w~v~l~~i~vgg~~~~--~~~~~~iiDSGts~~~lp~~~~  231 (342)
T d1eaga_         156 SLYLNSPDA--ATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTIN--TDNVDVLLDSGTTITYLQQDLA  231 (342)
T ss_dssp             EEECCCTTC--SEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEE--EEEEEEEECTTCSSEEECHHHH
T ss_pred             EEEcCCCCC--CCceEEEcccCchhccceEEEEecccccceEEEEeeEEECCEEec--ccccccccccCCccccCCHHHH
Confidence            999987532  379999999999999999999999999999999999999999875  3567899999999999999999


Q ss_pred             HHHHHHhcCccccccchhhhhhhhhHHHHHHhhccCCccchhccCcccccCCCCCcccccccccccCCcCCCCCCCCccc
Q 010230          309 TQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMC  388 (514)
Q Consensus       309 ~~l~~~l~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (514)
                      ++|.+++++...                                                                    
T Consensus       232 ~~l~~~l~~~~~--------------------------------------------------------------------  243 (342)
T d1eaga_         232 DQIIKAFNGKLT--------------------------------------------------------------------  243 (342)
T ss_dssp             HHHHHHTTCEEE--------------------------------------------------------------------
T ss_pred             HHHHHHhCcccc--------------------------------------------------------------------
Confidence            999999976510                                                                    


Q ss_pred             chhHHHHHHHHHhhhhhhhHHHHHHhhhhhcccCCCCCCCeeecCCCCCCCCcEEEEEC-CEEEEeCcccceeeecCC--
Q 010230          389 STCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIG-GKIFDLTPDQYILKVGEG--  465 (514)
Q Consensus       389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~g-g~~~~i~~~~y~~~~~~~--  465 (514)
                                                      ........|.++|+   ..|+|+|+|+ +..+.|||++|+++....  
T Consensus       244 --------------------------------~~~~~~~~~~~~c~---~~p~i~f~f~~~~~~~i~~~~y~~~~~~~~~  288 (342)
T d1eaga_         244 --------------------------------QDSNGNSFYEVDCN---LSGDVVFNFSKNAKISVPASEFAASLQGDDG  288 (342)
T ss_dssp             --------------------------------ECTTSCEEEEEESC---CCSEEEEECSTTCEEEEEGGGGEEEC---CC
T ss_pred             --------------------------------ccCCCCceeccccc---cCCCEEEEECCCEEEEEChHHeEEEecCCCC
Confidence                                            00012345889998   5799999995 799999999999875432  


Q ss_pred             -CCceeeeeeEecccCCCCCCeeeeChhhhcCeEEEEECCCCeEEEEEcC
Q 010230          466 -DAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA  514 (514)
Q Consensus       466 -~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~a~  514 (514)
                       ....|...+.       ..+.+|||.+|||++|+|||++++|||||+++
T Consensus       289 ~~~~~~~~~~~-------~~~~~ILG~~fl~~~y~vfD~~~~~iGfA~a~  331 (342)
T d1eaga_         289 QPYDKCQLLFD-------VNDANILGDNFLRSAYIVYDLDDNEISLAQVK  331 (342)
T ss_dssp             SCTTEEEECEE-------ECTTCEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred             ceeeEEEEccC-------CCCCcEECHHhhCcEEEEEECCCCEEEEEECC
Confidence             1234665443       23468999999999999999999999999975


No 17 
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=2.6e-51  Score=410.84  Aligned_cols=322  Identities=44%  Similarity=0.817  Sum_probs=284.7

Q ss_pred             CccEEeceeccCceEEEEEEecCCCceEEEEeeCCCCceeeeCCCCCCCcccCCCCcccCCCCCcceeCCceEEEEeccc
Q 010230           76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG  155 (514)
Q Consensus        76 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~G  155 (514)
                      +..++||.|+.|.+|+++|.||||||++.|++||||+++||+|..|. ...|..++.|+|++|+|++..+|.+.+.|++|
T Consensus         2 ~~~svPl~~~~d~~Y~~~i~vGtP~q~~~~~~DTGSs~~Wv~~~~C~-~~~~~~~~~y~~~~Sst~~~~~~~~~~~y~~g   80 (323)
T d3cmsa_           2 EVASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTG   80 (323)
T ss_dssp             CCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTE
T ss_pred             CceEEeeEeccCCEEEEEEEECCCCEEEEEEEECCCCceEEecCCCC-CcccCCCCCCCccccCccccCCCcEEEEcCCc
Confidence            46789999999999999999999999999999999999999999997 44577889999999999999999999999999


Q ss_pred             eEEEEEEEEEEEECceeecccEEEEEEeeCCcccccccceeeeecccccccCCCCCcHHHHHHHcCCCCCCEEEEEecCC
Q 010230          156 AISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRN  235 (514)
Q Consensus       156 ~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l~~~  235 (514)
                      ++.|.++.|.+++++.++..+.|+++.......+......+++|+++.........+++.+|++++.|+++.||+++.+.
T Consensus        81 s~~G~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~i~~~~fs~~l~~~  160 (323)
T d3cmsa_          81 SMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRN  160 (323)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTT
T ss_pred             eEEEEEEEEEEEEeccccccceEEEEEeecccccccccccccccccccccccCCCcchhhhHhhcCCCcccceeEEeccC
Confidence            99999999999999999988889888877765555556678888888877777778899999999999999999999876


Q ss_pred             CCCCCCcEEEECccCCCCCccceeEEeccCccceEEEeceEEEcCeeeeeecCCceEEEcCCCCCcccCHHHHHHHHHHh
Q 010230          236 ADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAI  315 (514)
Q Consensus       236 ~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDSGtt~~~lP~~~~~~l~~~l  315 (514)
                      ..   .|.+.+|++|..++.+++.|+|+....+|.+.+.++.+++.... ......++|||||++++||++++++|++++
T Consensus       161 ~~---~~~~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~iiDSGtt~~~lp~~~~~~l~~~~  236 (323)
T d3cmsa_         161 GQ---ESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVA-CEGGCQAILDTGTSKLVGPSSDILNIQQAI  236 (323)
T ss_dssp             SS---CEEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE-STTCEEEEECTTCCSEEECHHHHHHHHHHH
T ss_pred             CC---CCceeccccCcccccCceEEeeccccceeEEEEeeEeeCCeeee-cCCCeeEEEecCcceEEecHHHHHHHHHHh
Confidence            43   78999999999999999999999999999999999999988775 456788999999999999999999999999


Q ss_pred             cCccccccchhhhhhhhhHHHHHHhhccCCccchhccCcccccCCCCCcccccccccccCCcCCCCCCCCcccchhHHHH
Q 010230          316 GATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAV  395 (514)
Q Consensus       316 ~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (514)
                      ++..                                                                            
T Consensus       237 ~~~~----------------------------------------------------------------------------  240 (323)
T d3cmsa_         237 GATQ----------------------------------------------------------------------------  240 (323)
T ss_dssp             TCEE----------------------------------------------------------------------------
T ss_pred             Ccee----------------------------------------------------------------------------
Confidence            7651                                                                            


Q ss_pred             HHHHHhhhhhhhHHHHHHhhhhhcccCCCCCCCeeecCCCCCCCCcEEEEECCEEEEeCcccceeeecCCCCceeeeeeE
Q 010230          396 VWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFS  475 (514)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~gg~~~~i~~~~y~~~~~~~~~~~C~~~i~  475 (514)
                                                  ...+.|..+|+....+|.|+|+|+|..++|||++|+.+.    .+.|.++|+
T Consensus       241 ----------------------------~~~~~~~~~~~~~~~~p~i~f~f~g~~~~l~~~~y~~~~----~~~c~~~i~  288 (323)
T d3cmsa_         241 ----------------------------NQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPSAYTSQD----QGFCTSGFQ  288 (323)
T ss_dssp             ----------------------------ETTTEEEECTTCTTTSCCEEEEETTEEEEECHHHHEEEE----TTEEEESEE
T ss_pred             ----------------------------ccCCceeEeccccCCCCeEEEEECCEEEEECHHHeEEcC----CCEEEEEEE
Confidence                                        123457788887788999999999999999999999763    258999998


Q ss_pred             ecccCCCCCCeeeeChhhhcCeEEEEECCCCeEEEEEcC
Q 010230          476 ALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA  514 (514)
Q Consensus       476 ~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~a~  514 (514)
                      ..+    .++.+|||.+|||++|++||++++|||||||.
T Consensus       289 ~~~----~~~~~iLG~~~l~~~yvvfD~~~~~igfa~a~  323 (323)
T d3cmsa_         289 SEN----HSQKWILGDVFIREYYSVFDRANNLVGLAKAI  323 (323)
T ss_dssp             EC-------CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred             eCC----CCCCEEEcHHhhCcEEEEEECCCCEEEEEEeC
Confidence            643    34578999999999999999999999999984


No 18 
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]}
Probab=100.00  E-value=1.2e-50  Score=407.09  Aligned_cols=314  Identities=30%  Similarity=0.441  Sum_probs=261.5

Q ss_pred             CccEEeceeccCceEEEEEEecCCCceEEEEeeCCCCceeeeCCCCCCCcccCCCCcccCCCCCcceeCCceEEEEeccc
Q 010230           76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG  155 (514)
Q Consensus        76 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~G  155 (514)
                      .....|+.+  |.+|+++|.||+  |++.|++||||+++||+|+.|. ...|..++.|+++ |+|+...++.+.+.|++|
T Consensus         5 ~~~~~~~~~--d~~Y~~~i~iG~--q~~~l~~DTGSs~~Wv~~~~C~-~~~~~~~~~~~~~-sSt~~~~~~~~~i~Y~~G   78 (323)
T d1izea_           5 SVTTNPTSN--DEEYITQVTVGD--DTLGLDFDTGSADLWVFSSQTP-SSERSGHDYYTPG-SSAQKIDGATWSISYGDG   78 (323)
T ss_dssp             EEEEEECGG--GCCEEEEEEETT--EEEEEEEETTCCCCEECBTTSC-HHHHTTSCCBCCC-TTCEEEEEEEEEEECTTS
T ss_pred             cccccccCC--ccEEEEEEEECC--eeEEEEEECCCcceEEEcCCCC-ChhhcCCCccCcc-ccccccCCCEEEEEcCCc
Confidence            345567766  688999999995  8999999999999999999996 4567777888875 667788899999999999


Q ss_pred             e-EEEEEEEEEEEECceeecccEEEEEEeeCCcccccccceeeeecccccccCCCC---CcHHHHHHHcCCCCCCEEEEE
Q 010230          156 A-ISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKA---VPVWYNMVNQGLVNEPVFSFW  231 (514)
Q Consensus       156 ~-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~---~~~~~~l~~qg~i~~~~FSl~  231 (514)
                      + +.|.+++|++++++..++++.|+++.......+....++||+|||++..+....   ..+..++  ++.+..++|+++
T Consensus        79 ~~~~G~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~~~~~~~~~~~~~~~~--~~~~~~~~fs~~  156 (323)
T d1izea_          79 SSASGDVYKDKVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNV--KSSLSEPIFAVA  156 (323)
T ss_dssp             CEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHH--GGGSSSSEEEEE
T ss_pred             ceeeeEEEeeeeeccCccccceEEEEEEeccCccccccccccccccccccccccCcccchHHHHhh--hhhcCcceEEEE
Confidence            7 799999999999999999999999988766555666789999999987664332   2244444  345888999999


Q ss_pred             ecCCCCCCCCcEEEECccCCCCCccceeEEeccC-ccceEEEeceEEEcCeeeeeecCCceEEEcCCCCCcccCHHHHHH
Q 010230          232 FNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQ-KGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQ  310 (514)
Q Consensus       232 l~~~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~-~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDSGtt~~~lP~~~~~~  310 (514)
                      +.+..    .|.|+|||+|++++.|++.|+|+.+ ..+|.+.++++.+++....   ....++|||||+++++|++++++
T Consensus       157 l~~~~----~g~l~~Gg~d~~~~~g~~~~~~~~~~~~~~~v~~~~i~v~~~~~~---~~~~~ivDSGts~~~lp~~~~~~  229 (323)
T d1izea_         157 LKHNA----PGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGSDSSS---DSITGIADTGTTLLLLDDSIVDA  229 (323)
T ss_dssp             CCTTS----CEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETTEEEC---CCEEEEECTTCCSEEECHHHHHH
T ss_pred             ccCCC----CeeEEccccCcccccCcceeeeecCCCceEEEEeceEEECCCccc---cCceEEeccCCccccCCHHHHHH
Confidence            98754    6999999999999999999999964 6789999999999998763   56789999999999999999999


Q ss_pred             HHHHhcCccccccchhhhhhhhhHHHHHHhhccCCccchhccCcccccCCCCCcccccccccccCCcCCCCCCCCcccch
Q 010230          311 VNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCST  390 (514)
Q Consensus       311 l~~~l~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (514)
                      +++.+++..                                                                       
T Consensus       230 ~~~~~~~~~-----------------------------------------------------------------------  238 (323)
T d1izea_         230 YYEQVNGAS-----------------------------------------------------------------------  238 (323)
T ss_dssp             HHTTSTTCE-----------------------------------------------------------------------
T ss_pred             HHHHcCCcc-----------------------------------------------------------------------
Confidence            998876541                                                                       


Q ss_pred             hHHHHHHHHHhhhhhhhHHHHHHhhhhhcccCCCCCCCeeecCCCCCCCCcEEEEECCEEEEeCcccceeeecCCCCcee
Q 010230          391 CEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQC  470 (514)
Q Consensus       391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~gg~~~~i~~~~y~~~~~~~~~~~C  470 (514)
                                                     .....+.+.++|.  ..+|.|+|+|+|.++.||+++|++....+  ..|
T Consensus       239 -------------------------------~~~~~~~~~~~~~--~~~p~i~f~f~g~~~~ip~~~~~~~~~~~--~~C  283 (323)
T d1izea_         239 -------------------------------YDSSQGGYVFPSS--ASLPDFSVTIGDYTATVPGEYISFADVGN--GQT  283 (323)
T ss_dssp             -------------------------------EETTTTEEEEETT--CCCCCEEEEETTEEEEECHHHHEEEECST--TEE
T ss_pred             -------------------------------ccCCCCcEEeecc--cCCceEEEEECCEEEEcChHHEEEEeCCC--CEE
Confidence                                           0122345777887  57999999999999999999998875443  689


Q ss_pred             eeeeEecccCCCCCCeeeeChhhhcCeEEEEECCCCeEEEEEcC
Q 010230          471 ISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA  514 (514)
Q Consensus       471 ~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~a~  514 (514)
                      +++|...    +..+.+|||.+|||++|+|||++++|||||++|
T Consensus       284 ~~~i~~~----~~~~~~iLG~~flr~~y~vfD~~~~~IGfA~~a  323 (323)
T d1izea_         284 FGGIQSN----SGIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA  323 (323)
T ss_dssp             EESEEEC----TTTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred             EEEEECC----CCCCCEEECHHHhCCEEEEEECCCCEEEEccCC
Confidence            9988753    344579999999999999999999999999987


No 19 
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]}
Probab=100.00  E-value=1.9e-50  Score=408.80  Aligned_cols=314  Identities=28%  Similarity=0.477  Sum_probs=256.5

Q ss_pred             ccEEeceeccCceEEEEEEecCCCceEEEEeeCCCCceeeeCCCCCCCcccCCCCcccCCCCCcceeCCceEEEEeccce
Q 010230           77 ADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA  156 (514)
Q Consensus        77 ~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~G~  156 (514)
                      +.++||+|. ..+|+++|+||||||++.|++||||+++||+|..|.             .+|+|++...+.+.+.|++|+
T Consensus         2 ~~~~p~~~~-~~~Y~~~i~iGtP~Q~~~~i~DTGSs~~wv~~~~c~-------------~~sst~~~~~~~~~i~Y~~gs   67 (340)
T d1wkra_           2 AGSVPATNQ-LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGADKSY-------------VKTSTSSATSDKVSVTYGSGS   67 (340)
T ss_dssp             CEEEEEEEC-SSCEEEEEEETTTTEEEEEEEETTCCCCEECSSSCC-------------CCCTTCEEEEEEEEEECSSCE
T ss_pred             CceEceecC-CeEEEEEEEEcCCCeEEEEEEECCCcceEEcCCCCC-------------CCCCCcCCCCCeEEEEeCCeE
Confidence            357999987 477999999999999999999999999999988874             236777888899999999999


Q ss_pred             EEEEEEEEEEEECceeecccEEEEEEeeCCcccccccceeeeecccccccC--------CCCCcHHHHHHHcCCCCCCEE
Q 010230          157 ISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISV--------GKAVPVWYNMVNQGLVNEPVF  228 (514)
Q Consensus       157 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~--------~~~~~~~~~l~~qg~i~~~~F  228 (514)
                      +.|.+++|++++++.+++++.||++......    ...+||+|+|+.....        ....+++.+|++|+.+.++.|
T Consensus        68 ~~G~~~~D~~~~~~~~~~~~~fg~~~~~~~~----~~~~gi~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~q~~i~~~~f  143 (340)
T d1wkra_          68 FSGTEYTDTVTLGSLTIPKQSIGVASRDSGF----DGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLL  143 (340)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEEEEEEEESC----TTCSEEEECSCGGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEE
T ss_pred             EEEEEEEEEEeeCCeeeccEEEEEEEeccCc----ccccceecccccccccccccCccccCcCchhhhHHhhhccchhhe
Confidence            9999999999999999999999999876542    3568999999876542        234568999999999999999


Q ss_pred             EEEecCCCCC-CCCcEEEECccCCCCCccceeEEeccC----ccceEEEeceEEEcCeeeeeecCCceEEEcCCCCCccc
Q 010230          229 SFWFNRNADE-EEGGEIVFGGMDPDHYKGEHTYVPVTQ----KGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAG  303 (514)
Q Consensus       229 Sl~l~~~~~~-~~~G~L~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDSGtt~~~l  303 (514)
                      ++||.+..+. ...|.|+|||+|++++.|++.|+|+..    ..+|.|.++.+.+++..+.   ....+||||||++++|
T Consensus       144 s~~l~~~~~~~~~~g~l~~Gg~d~~~~~g~i~~~pv~~~~~~~~y~~i~~~~~~~~~~~~~---~~~~aiiDSGtt~~~l  220 (340)
T d1wkra_         144 AVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGINQSIRYGSSTSIL---SSTAGIVDTGTTLTLI  220 (340)
T ss_dssp             EEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEEEEEEETTTEEEE---EEEEEEECTTBCSEEE
T ss_pred             eeeecccCCCCCCCceEEccccChhhcccceEEEEeecCCCCcceeEEEEEEEECCceEec---cCcceEEecCCccEec
Confidence            9999876432 246899999999999999999999965    3589999976666665543   3567999999999999


Q ss_pred             CHHHHHHHHHHhcCccccccchhhhhhhhhHHHHHHhhccCCccchhccCcccccCCCCCcccccccccccCCcCCCCCC
Q 010230          304 PTTIITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGF  383 (514)
Q Consensus       304 P~~~~~~l~~~l~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (514)
                      |++++++|++++++..                                                                
T Consensus       221 P~~~~~~l~~~~~~~~----------------------------------------------------------------  236 (340)
T d1wkra_         221 ASDAFAKYKKATGAVA----------------------------------------------------------------  236 (340)
T ss_dssp             CHHHHHHHHHHHTCEE----------------------------------------------------------------
T ss_pred             cHHHHHHHHHHhCccc----------------------------------------------------------------
Confidence            9999999999997651                                                                


Q ss_pred             CCcccchhHHHHHHHHHhhhhhhhHHHHHHhhhhhcccCCCCCCCeeecCCCCCCCCcEEEEECCEEEEeCcccceeeec
Q 010230          384 HDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVG  463 (514)
Q Consensus       384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~gg~~~~i~~~~y~~~~~  463 (514)
                                                             ....+.|.++|+....+|+|+|+|+|.+++|++++|+.+..
T Consensus       237 ---------------------------------------~~~~~~~~~~c~~~~~~P~i~f~f~g~~~~i~~~~yi~~~~  277 (340)
T d1wkra_         237 ---------------------------------------DNNTGLLRLTTAQYANLQSLFFTIGGQTFELTANAQIWPRN  277 (340)
T ss_dssp             ---------------------------------------CTTTSSEEECHHHHHTCCCEEEEETTEEEEECTGGGBCCGG
T ss_pred             ---------------------------------------cCCceEEEEeccccCCCCceEEEECCEEEEEChHHeEeecc
Confidence                                                   02346789999877789999999999999999999997543


Q ss_pred             CC----CCce-eeeeeEecccCCCCCCeeeeChhhhcCeEEEEECCCCeEEEEEcC
Q 010230          464 EG----DAAQ-CISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA  514 (514)
Q Consensus       464 ~~----~~~~-C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~a~  514 (514)
                      ..    .... |...+.........+..||||.+|||++|++||++++|||||+++
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfA~~~  333 (340)
T d1wkra_         278 LNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTS  333 (340)
T ss_dssp             GGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECT
T ss_pred             CceeecCccceEEEEEecccCCCCCCCCEEechHHhCCEEEEEECCCCEEEEEECC
Confidence            11    1122 222222222233445679999999999999999999999999985


No 20 
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]}
Probab=100.00  E-value=1.2e-49  Score=399.50  Aligned_cols=315  Identities=27%  Similarity=0.450  Sum_probs=261.3

Q ss_pred             CccEEeceeccCceEEEEEEecCCCceEEEEeeCCCCceeeeCCCCCCCcccCCCCcccCCCCCcceeCCceEEEEeccc
Q 010230           76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG  155 (514)
Q Consensus        76 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~G  155 (514)
                      ....+|+.|  |.+|+++|+||+  |++.|++||||+++||+|..|. ...|..++.|+|++|+|+.+ ++.+.+.|++|
T Consensus         5 ~~~~~~~~~--d~~Y~~~i~vG~--~~~~v~~DTGSs~~Wv~~~~C~-~c~~~~~~~y~~s~Sst~~~-~~~~~~~Y~~G   78 (323)
T d1bxoa_           5 VATNTPTAN--DEEYITPVTIGG--TTLNLNFDTGSADLWVFSTELP-ASQQSGHSVYNPSATGKELS-GYTWSISYGDG   78 (323)
T ss_dssp             EEEEEECGG--GSCEEEEEEETT--EEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCHHHHCEEEE-EEEEEEECTTS
T ss_pred             ccccccccC--CcEEEEEEEECC--ccEEEEEECCCcceEEECCCCC-chhhcCCCCCCCcccccccC-CCEEEEEeCCC
Confidence            445688877  689999999998  4678999999999999999996 44677788999999988775 68899999999


Q ss_pred             e-EEEEEEEEEEEECceeecccEEEEEEeeCCcccccccceeeeecccccccCC--CCCcHHHHHHHcCCCCCCEEEEEe
Q 010230          156 A-ISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVG--KAVPVWYNMVNQGLVNEPVFSFWF  232 (514)
Q Consensus       156 ~-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~--~~~~~~~~l~~qg~i~~~~FSl~l  232 (514)
                      + +.|.++.|++.+++..+.++.|+++.......+.....+||+|||++..+..  ...+.+.++.+. .+..+.|++++
T Consensus        79 ~~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GilGlg~~~~s~~~~~~~~~~~~~~~~-~~~~~~fs~~~  157 (323)
T d1bxoa_          79 SSASGNVFTDSVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKS-SLAQPLFAVAL  157 (323)
T ss_dssp             CEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGG-GBSSSEEEEEC
T ss_pred             CcEEEEEEEEeeeccCcccccceeeeeeeeecccccccccccccccccCcccccCCCcCchHHHHHhh-hcccceeeecc
Confidence            7 7999999999999999999999999877654445567799999999776542  233444444333 36789999998


Q ss_pred             cCCCCCCCCcEEEECccCCCCCccceeEEeccC-ccceEEEeceEEEcCeeeeeecCCceEEEcCCCCCcccCHHHHHHH
Q 010230          233 NRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQ-KGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQV  311 (514)
Q Consensus       233 ~~~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~-~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDSGtt~~~lP~~~~~~l  311 (514)
                      ....    .|.|+|||+|++++.+++.|+|+.. ..+|.+.++++.+++....    ...++|||||+++++|.+++++|
T Consensus       158 ~~~~----~g~l~~Gg~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~----~~~aiiDSGTs~~~lp~~~~~~l  229 (323)
T d1bxoa_         158 KHQQ----PGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGSQSGD----GFSGIADTGTTLLLLDDSVVSQY  229 (323)
T ss_dssp             CSSS----CEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETTEEEE----EEEEEECTTCSSEEECHHHHHHH
T ss_pred             ccCC----CceeeeeccccccccCceeeeeccCcccceeEeeeeEEECCEecC----CcceEEecccccccCCHHHHHHH
Confidence            7654    7999999999999999999999865 5689999999999987653    46799999999999999999999


Q ss_pred             HHHhcCccccccchhhhhhhhhHHHHHHhhccCCccchhccCcccccCCCCCcccccccccccCCcCCCCCCCCcccchh
Q 010230          312 NHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTC  391 (514)
Q Consensus       312 ~~~l~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (514)
                      ++++++...                                                                       
T Consensus       230 ~~~i~~~~~-----------------------------------------------------------------------  238 (323)
T d1bxoa_         230 YSQVSGAQQ-----------------------------------------------------------------------  238 (323)
T ss_dssp             HTTSTTCEE-----------------------------------------------------------------------
T ss_pred             HHHhCCccc-----------------------------------------------------------------------
Confidence            988765410                                                                       


Q ss_pred             HHHHHHHHHhhhhhhhHHHHHHhhhhhcccCCCCCCCeeecCCCCCCCCcEEEEECCEEEEeCcccceeeecCCCCceee
Q 010230          392 EMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCI  471 (514)
Q Consensus       392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~gg~~~~i~~~~y~~~~~~~~~~~C~  471 (514)
                                                     ....+.|.++|+  ..+|+|+|+|+|.++.|++++|++.... +...|+
T Consensus       239 -------------------------------~~~~~~~~~~c~--~~~p~itf~f~g~~~~i~~~~~~~~~~~-~~~~C~  284 (323)
T d1bxoa_         239 -------------------------------DSNAGGYVFDCS--TNLPDFSVSISGYTATVPGSLINYGPSG-DGSTCL  284 (323)
T ss_dssp             -------------------------------ETTTTEEEECTT--CCCCCEEEEETTEEEEECHHHHEEEECS-SSSCEE
T ss_pred             -------------------------------cCCCCcEEEecc--CCCCcEEEEECCEEEEEChHHeEEEEcC-CCCEEE
Confidence                                           023456889998  5899999999999999999999876543 346899


Q ss_pred             eeeEecccCCCCCCeeeeChhhhcCeEEEEECCCCeEEEEEcC
Q 010230          472 SGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA  514 (514)
Q Consensus       472 ~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~a~  514 (514)
                      ++|...    ...+.+|||.+|||++|+|||++++||||||+|
T Consensus       285 ~~i~~~----~~~~~~ILG~~flr~~y~vfD~~~~~IGfAp~~  323 (323)
T d1bxoa_         285 GGIQSN----SGIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA  323 (323)
T ss_dssp             ESEEEC----TTCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred             EEEECC----CCCCcEEECHHHhCCEEEEEECCCCEEeEEeCC
Confidence            888753    233568999999999999999999999999987


No 21 
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5e-48  Score=397.85  Aligned_cols=326  Identities=26%  Similarity=0.399  Sum_probs=254.5

Q ss_pred             eceeccCceEEEEEEecCCCceEEEEeeCCCCceeeeCCCCCCCcccCCCCcccCCCCCcceeCCceEEEEeccceEEEE
Q 010230           81 ALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGF  160 (514)
Q Consensus        81 ~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~G~~~G~  160 (514)
                      .|.+..+..|+++|+||||||++.|+|||||+++||+|..|     |..+..|+|++|+||+..++.+.+.|++|++.|.
T Consensus         7 ~l~~~~~~~Y~~~i~IGtP~Q~~~li~DTGSs~lWv~~~~c-----~~~~~~f~~~~SsT~~~~~~~~~i~Y~~g~~~G~   81 (387)
T d2qp8a1           7 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGE   81 (387)
T ss_dssp             CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred             cccCCCCCEEEEEEEECCCCEEEEEEEECCccceEEccCCC-----CcCCCccCcccCCCcEeCCCcEEEEeCCccEEEE
Confidence            45566678899999999999999999999999999999988     3345789999999999999999999999999999


Q ss_pred             EEEEEEEECc--eeecccEEEEEEeeCCcccccccceeeeecccccccC--CCCCcHHHHHHHcCCCCCCEEEEEecCCC
Q 010230          161 FSEDHVKIGD--LVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISV--GKAVPVWYNMVNQGLVNEPVFSFWFNRNA  236 (514)
Q Consensus       161 ~~~D~v~ig~--~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~--~~~~~~~~~l~~qg~i~~~~FSl~l~~~~  236 (514)
                      +++|+|+|++  ....++.|++........+....++||||||++..+.  ....++++.|.+++.+ .++||+|+.+..
T Consensus        82 ~~~D~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~~~~~-~~~fs~~l~~~~  160 (387)
T d2qp8a1          82 LGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHV-PNLFSLQLCGAG  160 (387)
T ss_dssp             EEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCC-CSCEEEEECCCS
T ss_pred             EEEEEEEEcCCCceeEeEEEEEEEecCCcccccccccccccccccccccCCCCCCchHHHHhhccCc-ceeEeEeecccc
Confidence            9999999985  2223345555554434334556789999999987664  3345677888888876 589999997643


Q ss_pred             C--------CCCCcEEEECccCCCCCccceeEEeccCccceEEEeceEEEcCeeeeee---cCCceEEEcCCCCCcccCH
Q 010230          237 D--------EEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFC---AGGCAAIADSGTSLLAGPT  305 (514)
Q Consensus       237 ~--------~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~---~~~~~aiiDSGtt~~~lP~  305 (514)
                      .        ....|+|+|||+|++++.++++|+|+..+.+|.+.+++|.+++..+...   .....++||||+++++||+
T Consensus       161 ~~~~~~~~~~~~~G~l~~Gg~d~~~~~g~~~~~~~~~~~~~~v~~~~i~v~g~~~~~~~~~~~~~~aiiDSGts~i~lp~  240 (387)
T d2qp8a1         161 FPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPK  240 (387)
T ss_dssp             SCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEH
T ss_pred             ccccccccccCCCceeEecccccccccCceEeecccccceeEEEEEEEEECCEecccccccCCccceEEecCCCeEeCCH
Confidence            1        1246999999999999999999999999999999999999999988642   2356799999999999999


Q ss_pred             HHHHHHHHHhcCccccccchhhhhhhhhHHHHHHhhccCCccchhccCcccccCCCCCcccccccccccCCcCCCCCCCC
Q 010230          306 TIITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHD  385 (514)
Q Consensus       306 ~~~~~l~~~l~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (514)
                      +++++|.+++++.......+..                                                          
T Consensus       241 ~~~~~l~~~~~~~~~~~~~~~~----------------------------------------------------------  262 (387)
T d2qp8a1         241 KVFEAAVKSIKAASSTEKFPDG----------------------------------------------------------  262 (387)
T ss_dssp             HHHHHHHHHHHHHTTTSCCCHH----------------------------------------------------------
T ss_pred             HHHHHHHHHhcccccccccCCc----------------------------------------------------------
Confidence            9999999999754100000000                                                          


Q ss_pred             cccchhHHHHHHHHHhhhhhhhHHHHHHhhhhhcccCCCCCCCeeecCC-----CCCCCCcEEEEECC------EEEEeC
Q 010230          386 AMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCS-----RLSSLPIVSFTIGG------KIFDLT  454 (514)
Q Consensus       386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~-----~~~~~P~i~f~~gg------~~~~i~  454 (514)
                                                             ....+.++|.     ....+|.++|.|.+      .++.|+
T Consensus       263 ---------------------------------------~~~~~~~~C~~~~~~~~~~fp~~~~~~~~~~~~~~~~~~i~  303 (387)
T d2qp8a1         263 ---------------------------------------FWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITIL  303 (387)
T ss_dssp             ---------------------------------------HHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEEC
T ss_pred             ---------------------------------------cccceeeeeeecCCCccccccceEEEeccccccceEEEEEC
Confidence                                                   0001122332     22368999999953      489999


Q ss_pred             cccceeeecCC--CCceeeeeeEecccCCCCCCeeeeChhhhcCeEEEEECCCCeEEEEEcC
Q 010230          455 PDQYILKVGEG--DAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA  514 (514)
Q Consensus       455 ~~~y~~~~~~~--~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~a~  514 (514)
                      |++|+....+.  ....|+..+...     ....||||.+|||++|+|||++++|||||+|+
T Consensus       304 p~~y~~~~~~~~~~~~~c~~~~~~~-----~~~~~ILG~~Flr~~y~vfD~~~~~IGfA~a~  360 (387)
T d2qp8a1         304 PQQYLRPVEDVATSQDDCYKFAISQ-----SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA  360 (387)
T ss_dssp             HHHHEEEECCTTCCSCEEEEECEEE-----ESSCEEECHHHHTTEEEEEETTTTEEEEEEET
T ss_pred             HHHheeeccccCCcCceEEEEEeCC-----CCCCEEEhHHhhCcEEEEEECCCCEEEEEECC
Confidence            99999876543  345687655432     33568999999999999999999999999985


No 22 
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]}
Probab=100.00  E-value=3.4e-41  Score=345.47  Aligned_cols=338  Identities=13%  Similarity=0.152  Sum_probs=229.9

Q ss_pred             EEeceec-cCceEEEEEEecCCCceEEEEeeCCCCceeeeCCCCCCC-------cccCCCCcc-------cCCCCCccee
Q 010230           79 IVALKNY-MDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFS-------IACYFHSKY-------RSGRSSTYKK  143 (514)
Q Consensus        79 ~~~l~n~-~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~C~~~-------~~C~~~~~y-------~~~~SsT~~~  143 (514)
                      .+|+.+. .+.+|+++|+||||     |+|||||+++||+|..|..+       ..|.....|       ....|+++..
T Consensus         4 ~~pi~~~~~~~~Y~~~i~iGtp-----liiDTGSs~~Wvpc~~c~~~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~   78 (381)
T d1t6ex_           4 LAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPGCPAPSCGSDKHDK   78 (381)
T ss_dssp             EEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTCCCCCCBTTSHHHHHHHSSCCTTCCCCCC------C
T ss_pred             EEeecccCCCCeEEEEEEcCCc-----eEEECCCCceeeccCCCCCCcccccCCchhhhccCcCCCCCCCccccCCCCCC
Confidence            4788643 35689999999997     99999999999999887521       122212223       2335666777


Q ss_pred             CCceEEEEeccce-EEEEEEEEEEEECceeeccc----EEEEEEeeCC---cccccccceeeeecccccccCCCCCcHHH
Q 010230          144 NGKSADIHYGTGA-ISGFFSEDHVKIGDLVVKDQ----EFIEATREPS---LTFLLAKFDGILGLGFQEISVGKAVPVWY  215 (514)
Q Consensus       144 ~~~~~~~~Y~~G~-~~G~~~~D~v~ig~~~~~~~----~fg~~~~~~~---~~~~~~~~~GilGLg~~~~s~~~~~~~~~  215 (514)
                      ..+.+.+.|++|+ +.|.+++|+|++++.....+    .++++.....   ..+.....+||+|||+...+      +..
T Consensus        79 ~~~~~~~~Y~~Gs~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGi~Glg~~~~s------~~~  152 (381)
T d1t6ex_          79 PCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPRGSTGVAGLANSGLA------LPA  152 (381)
T ss_dssp             BCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTSCTTEEEEEECSSSTTS------HHH
T ss_pred             CCceeEEEeCCCCEEEEEEEEEEEEecccccccceeeEEeeeeeeccccccccccccCcceeeecCCCCcc------hHH
Confidence            7888999999997 68999999999997655443    3333332211   11234467999999987654      778


Q ss_pred             HHHHcCCCCCCEEEEEecCCCCCCCCcEEEECccCCCCCccceeEEeccC---ccceEEEeceEEEcCeeeeee---cCC
Q 010230          216 NMVNQGLVNEPVFSFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQ---KGYWQFDMGDVMIDGQTTGFC---AGG  289 (514)
Q Consensus       216 ~l~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~---~~~w~v~l~~i~v~~~~~~~~---~~~  289 (514)
                      +|.+++.++ ++|++|+.+...  ..+.+.+|++|..++.|++.|+|+..   ..+|.+.+++|.+++..+...   ...
T Consensus       153 ql~~~~~~~-~~fsl~l~~~~~--~~~~~~~g~~~~~~~~g~~~~~pi~~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~  229 (381)
T d1t6ex_         153 QVASAQKVA-NRFLLCLPTGGP--GVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALAT  229 (381)
T ss_dssp             HHHHHHTCC-SEEEEECCSSSC--EEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTTCSCT
T ss_pred             HHhhhcCcc-eEEEeecCCCcc--cceEeecccccccccCCceEEEeeeccCCCceeEEEEEEEeeCCeeeccCcccccC
Confidence            888888775 899999977642  25677788899999999999999964   357999999999999987643   235


Q ss_pred             ceEEEcCCCCCcccCHHHHHHHHHHhcCccccccchhhhhhhhhHHHHHHhhccCCccchhccCcccccCCCCCcccccc
Q 010230          290 CAAIADSGTSLLAGPTTIITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIE  369 (514)
Q Consensus       290 ~~aiiDSGtt~~~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (514)
                      ..+++||||++++||++++++|++++.....        ...+..          .+...+..     .           
T Consensus       230 ~~~i~DTGtt~~~lp~~~~~~i~~~~~~~~~--------~~~~~~----------~~~~~~~~-----~-----------  275 (381)
T d1t6ex_         230 GGVMLSTRLPYVLLRPDVYRPLMDAFTKALA--------AQHANG----------APVARAVE-----A-----------  275 (381)
T ss_dssp             TCEEECSSCSSEEECHHHHHHHHHHHHHHHH--------HC-----------------CCEEC-----C-----------
T ss_pred             cceEEecCCceEECCHHHHHHHHHHHHHHhc--------cccccc----------cccccccc-----c-----------
Confidence            6799999999999999999999999865410        000000          00000000     0           


Q ss_pred             cccccCCcCCCCCCCCcccchhHHHHHHHHHhhhhhhhHHHHHHhhhhhcccCCCCCCCeeecCCCCCCCCcEEEEE-CC
Q 010230          370 SVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTI-GG  448 (514)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~-gg  448 (514)
                                                                 .....+|+..+..  .   .+.....+|.|+|+| ++
T Consensus       276 -------------------------------------------~~~~~~~~~~~~~--~---~~~~~~~~P~i~~~f~~~  307 (381)
T d1t6ex_         276 -------------------------------------------VAPFGVCYDTKTL--G---NNLGGYAVPNVQLGLDGG  307 (381)
T ss_dssp             -------------------------------------------CTTCSCEEEGGGC--C---EETTEECCCCEEEEETTS
T ss_pred             -------------------------------------------cCCcceeeccccc--c---ccccccccccEEEEEcCC
Confidence                                                       0011223322110  0   111124789999999 68


Q ss_pred             EEEEeCcccceeeecCCCCceeeeeeEecc--cCCCCCCeeeeChhhhcCeEEEEECCCCeEEEEEcC
Q 010230          449 KIFDLTPDQYILKVGEGDAAQCISGFSALD--VAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA  514 (514)
Q Consensus       449 ~~~~i~~~~y~~~~~~~~~~~C~~~i~~~~--~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~a~  514 (514)
                      ..+.|+|++|++...++  ..|+..+....  .....++.||||++|||++|+|||++++|||||+++
T Consensus       308 ~~~~i~~~~y~~~~~~~--~~Cl~i~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfA~~~  373 (381)
T d1t6ex_         308 SDWTMTGKNSMVDVKQG--TACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLP  373 (381)
T ss_dssp             CEEEECHHHHEEEEETT--EEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECC
T ss_pred             cEEEEChhHeEEEeCCC--cEEEEEEecccccCCCCCCCcEEECHHHhCcEEEEEECCCCEEEEEECC
Confidence            99999999999876654  56764333211  122334579999999999999999999999999974


No 23 
>d1qdma1 a.64.1.2 (A:1S-104S) (Pro)phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]}
Probab=99.11  E-value=1.4e-11  Score=100.22  Aligned_cols=102  Identities=66%  Similarity=1.160  Sum_probs=71.9

Q ss_pred             ccchhhhhhhhhHHHHHHhhccCCccchhccCcccccCCCCCcccccccccccCCcCCCCCCCCcccchhHHHHHHHHHh
Q 010230          322 SQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQ  401 (514)
Q Consensus       322 ~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (514)
                      ...|+.++++|++++++++.+...|..+|...|+|..++...........++..+..+.....+..|.+|+++++++++.
T Consensus         3 s~eC~~~V~~Y~~~ii~~L~~~~~P~~IC~~lglC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~v~~v~~~   82 (104)
T d1qdma1           3 SQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQ   82 (104)
T ss_dssp             CHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC---------------------------CHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHhCCcccccccccchhhhhhhhccccccccCCCCCchhhHHHHHHHHHHH
Confidence            56899999999999999999999999999999999887766555444444444444555666778899999999999999


Q ss_pred             hhhhhhHHHHHHhhhhhcccCC
Q 010230          402 LKQNQTQERILNYVNELCDRLP  423 (514)
Q Consensus       402 ~~~~~~~~~~~~~~~~~c~~~~  423 (514)
                      |+.|.|+++|.+.+.+.|..+|
T Consensus        83 l~~n~Te~eI~~~l~~vC~~LP  104 (104)
T d1qdma1          83 LAQNKTQDLILDYVNQLCNRLP  104 (104)
T ss_dssp             HHTTCCHHHHHHHHHHHTTCBC
T ss_pred             HHccccHHHHHHHHHHHHhhCc
Confidence            9999999999999999999875


No 24 
>d2gtga1 a.64.1.1 (A:2-79) Saposin C {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.83  E-value=0.0081  Score=44.14  Aligned_cols=40  Identities=30%  Similarity=0.715  Sum_probs=37.3

Q ss_pred             CcccchhHHHHHHHHHhhhhhhhHHHHHHhhhhhcccCCC
Q 010230          385 DAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPS  424 (514)
Q Consensus       385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~  424 (514)
                      |..|..|++++.++++.|+.+.+++.|.+.+.+.|..+|.
T Consensus         1 di~C~~C~~~v~~~~~~l~~~~t~~~I~~~l~~~C~~lp~   40 (78)
T d2gtga1           1 DVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPK   40 (78)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTSSCH
T ss_pred             CCccHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHhCCc
Confidence            4579999999999999999999999999999999998874


No 25 
>d1nkla_ a.64.1.1 (A:) NK-lysin, NKL {Pig (Sus scrofa) [TaxId: 9823]}
Probab=92.87  E-value=0.02  Score=42.00  Aligned_cols=39  Identities=13%  Similarity=0.489  Sum_probs=36.6

Q ss_pred             cccchhHHHHHHHHHhhhhhhhHHHHHHhhhhhcccCCC
Q 010230          386 AMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPS  424 (514)
Q Consensus       386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~  424 (514)
                      .+|.+|++++.++++.|..|.++++|.+.+.+.|..+|.
T Consensus         2 ~~C~~C~~~v~~~~~~l~~~~t~~~I~~~l~~~C~~lp~   40 (78)
T d1nkla_           2 YFCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKI   40 (78)
T ss_dssp             CHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHSCS
T ss_pred             CccHhhHHHHHHHHHHHcCCccHHHHHHHHHHHHhcCCc
Confidence            369999999999999999999999999999999999874


No 26 
>d1n69a_ a.64.1.3 (A:) Saposin B {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.37  E-value=0.04  Score=40.34  Aligned_cols=38  Identities=32%  Similarity=0.586  Sum_probs=34.4

Q ss_pred             ccchhHHHHHHHHHhhhhhhh-HHHHHHhhhhhcccCCC
Q 010230          387 MCSTCEMAVVWMQNQLKQNQT-QERILNYVNELCDRLPS  424 (514)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~c~~~~~  424 (514)
                      .|..|+++++.+++.|+.|.| ++.|.+.+.+.|..+|.
T Consensus         3 ~C~~C~~~v~~v~~~l~~n~t~~~~I~~~l~~~C~~lp~   41 (78)
T d1n69a_           3 VCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGP   41 (78)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHGGGGCT
T ss_pred             chHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHhCCh
Confidence            699999999999999999887 56699999999999984


No 27 
>d1of9a_ a.64.1.4 (A:) Ameobapore A {Entamoeba histolytica [TaxId: 5759]}
Probab=92.28  E-value=0.035  Score=40.49  Aligned_cols=40  Identities=18%  Similarity=0.568  Sum_probs=34.2

Q ss_pred             CcccchhHHHHHHHHHhhhhhhhHHHHHHhhhhhcccCCCC
Q 010230          385 DAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSP  425 (514)
Q Consensus       385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~  425 (514)
                      ...|.+|+++++.+++.+ .|.|+++|.+.+.+.|..+|..
T Consensus         2 ~~~C~~C~~~v~~~~~l~-~~~t~~~I~~~l~~~C~~lp~~   41 (77)
T d1of9a_           2 EILCNLCTGLINTLENLL-TTKGADKVKDYISSLCNKASGF   41 (77)
T ss_dssp             CSSHHHHHHHHHHHHHHC-SSSCSHHHHHHHHHHHTTCSST
T ss_pred             CcchHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHCChH
Confidence            357999999999998766 5678889999999999999753


No 28 
>d1nkla_ a.64.1.1 (A:) NK-lysin, NKL {Pig (Sus scrofa) [TaxId: 9823]}
Probab=92.08  E-value=0.047  Score=39.83  Aligned_cols=37  Identities=30%  Similarity=0.617  Sum_probs=34.6

Q ss_pred             ccccchhhhhhhhhHHHHHHhhccCCccchhccCccc
Q 010230          320 IVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLC  356 (514)
Q Consensus       320 ~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~  356 (514)
                      .+...|..++++|++.+++.+....+|..+|...++|
T Consensus        40 ~~~~~C~~~v~~y~~~ii~~l~~~~~p~~iC~~l~lC   76 (78)
T d1nkla_          40 ILRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKIC   76 (78)
T ss_dssp             STHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTCS
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhCcC
Confidence            3567899999999999999999999999999999999


No 29 
>d1l9la_ a.64.1.1 (A:) Granulysin, NKG5 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.07  E-value=0.064  Score=38.73  Aligned_cols=37  Identities=22%  Similarity=0.280  Sum_probs=33.0

Q ss_pred             ccchhHHHHHHHHHhhhhhhhHHHHHHhhhhhcccCCC
Q 010230          387 MCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPS  424 (514)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~  424 (514)
                      .|-+|+++++++.+ |..|.|++.|.+.+.++|..+|.
T Consensus         3 ~c~tC~~vv~~ve~-l~~n~t~~~I~~~l~~~C~~lp~   39 (74)
T d1l9la_           3 DYRTCLTIVQKLKK-MVDKPTQRSVSNAATRVCRTGRS   39 (74)
T ss_dssp             HHHHHHHHHHHHHH-HCSSCCHHHHHHHHHHGGGSSCH
T ss_pred             ccHHHHHHHHHHHH-HhCCCCHHHHHHHHHhHHHHCCH
Confidence            48899999999986 55788999999999999999874


No 30 
>d1of9a_ a.64.1.4 (A:) Ameobapore A {Entamoeba histolytica [TaxId: 5759]}
Probab=90.97  E-value=0.029  Score=40.96  Aligned_cols=38  Identities=24%  Similarity=0.556  Sum_probs=34.9

Q ss_pred             cccccchhhhhhhhhHHHHHHhhccCCccchhccCccc
Q 010230          319 GIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLC  356 (514)
Q Consensus       319 ~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~  356 (514)
                      ..+...|+.++++|++.+++.+.++.+|..+|...++|
T Consensus        40 ~~~~~~C~~~v~~y~~~ii~~l~~~~~p~~iC~~l~lC   77 (77)
T d1of9a_          40 GFIATLCTKVLDFGIDKLIQLIEDKVDANAICAKIHAC   77 (77)
T ss_dssp             STTHHHHHHHHHHCHHHHHHHHHHTCCHHHHHHHHSCC
T ss_pred             hHHHHHhHHHHHHHHHHHHHHHHHcCCHHHHHHhcCCC
Confidence            34577899999999999999999999999999999988


No 31 
>d2gtga1 a.64.1.1 (A:2-79) Saposin C {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.51  E-value=0.077  Score=38.49  Aligned_cols=37  Identities=41%  Similarity=0.923  Sum_probs=34.5

Q ss_pred             cccchhhhhhhhhHHHHHHhhccCCccchhccCcccc
Q 010230          321 VSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCT  357 (514)
Q Consensus       321 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~  357 (514)
                      +...|+.+++.|++.+++.+.....|..+|...++|+
T Consensus        42 ~~~~C~~~v~~y~~~ii~~l~~~~~p~~iC~~l~lCs   78 (78)
T d2gtga1          42 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCS   78 (78)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTSCC
T ss_pred             hhhhhHHHHHHHHHHHHHHHHhCCCHHHHHHHcCCcC
Confidence            5678999999999999999999999999999999994


No 32 
>d1n69a_ a.64.1.3 (A:) Saposin B {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.93  E-value=0.15  Score=36.98  Aligned_cols=35  Identities=37%  Similarity=0.884  Sum_probs=31.7

Q ss_pred             cccchhhhhhhhhHHHHHHhhccCCccchhccCccc
Q 010230          321 VSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLC  356 (514)
Q Consensus       321 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~  356 (514)
                      +...|+.++++|++.+++.+. ..+|..+|...++|
T Consensus        43 ~~~~C~~~V~~y~~~ii~~l~-~~~P~~iC~~l~lC   77 (78)
T d1n69a_          43 MADICKNYISQYSEIAIQMMM-HMQPKEICALVGFC   77 (78)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHT-TSCHHHHHHHTTSC
T ss_pred             HHHHhHHHHHHHHHHHHHHHH-cCCHHHHHhHcCCC
Confidence            466899999999999999875 68999999999998


No 33 
>d1l9la_ a.64.1.1 (A:) Granulysin, NKG5 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.48  E-value=0.33  Score=34.73  Aligned_cols=33  Identities=24%  Similarity=0.590  Sum_probs=30.0

Q ss_pred             cccchhhhhhhhhHHHHHHhhccCCccchhccC
Q 010230          321 VSQECKAVVSQYGEEIINMLLAKDEPQKICSQI  353 (514)
Q Consensus       321 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~  353 (514)
                      +...|..+++.|++++++.+....+|..+|..+
T Consensus        41 ~~~~C~~lv~~Y~~~ii~~l~~~~~P~~IC~~l   73 (74)
T d1l9la_          41 WRDVCRNFMRRYQSRVIQGLVAGETAQQICEDL   73 (74)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHhh
Confidence            567899999999999999999999999999753


No 34 
>d4fiva_ b.50.1.1 (A:) Feline immunodeficiency virus (FIV) protease {Feline immunodeficiency virus [TaxId: 11673]}
Probab=68.51  E-value=2.2  Score=32.88  Aligned_cols=28  Identities=14%  Similarity=0.043  Sum_probs=24.0

Q ss_pred             EEEEEecCCCceEEEEeeCCCCceeeeCCC
Q 010230           91 FGEIGIGTPPQNFTVIFDTGSSNLWVPSSK  120 (514)
Q Consensus        91 ~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~  120 (514)
                      .+.+.||  +|.+++++|||.+++-+...+
T Consensus        12 ~v~v~I~--Gq~v~~LLDTGAD~TVi~~~d   39 (113)
T d4fiva_          12 EILIFVN--GYPIKFLLDTGADITILNRRD   39 (113)
T ss_dssp             EEEEEET--TEEEEEEECTTCSSCEEEGGG
T ss_pred             eEEEEEC--CEEEEEEEcCCCCcEEEeccc
Confidence            6788888  699999999999999997543


No 35 
>d2nmza1 b.50.1.1 (A:1-99) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=67.89  E-value=2.4  Score=31.36  Aligned_cols=27  Identities=26%  Similarity=0.332  Sum_probs=23.9

Q ss_pred             EEEEEecCCCceEEEEeeCCCCceeeeCC
Q 010230           91 FGEIGIGTPPQNFTVIFDTGSSNLWVPSS  119 (514)
Q Consensus        91 ~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~  119 (514)
                      .+.|.||  +|...+++|||.+++-+..-
T Consensus        10 ~vtvkIg--Gq~~eaLLDTGADdTVleei   36 (99)
T d2nmza1          10 LVTIKIG--GQLKEALLDTGADDTVIEEM   36 (99)
T ss_dssp             EEEEEET--TEEEEEEECTTCSSCEEESC
T ss_pred             eEEEEEC--CEEEEEeeccCCCceEEecc
Confidence            6889999  69999999999999999643


No 36 
>d2fmba_ b.50.1.1 (A:) EIAV protease {Equine infectious anemia virus [TaxId: 11665]}
Probab=67.25  E-value=2.5  Score=32.09  Aligned_cols=26  Identities=19%  Similarity=0.268  Sum_probs=22.8

Q ss_pred             EEEEEecCCCceEEEEeeCCCCceeeeC
Q 010230           91 FGEIGIGTPPQNFTVIFDTGSSNLWVPS  118 (514)
Q Consensus        91 ~~~i~iGtP~Q~~~v~~DTGSs~~wv~~  118 (514)
                      .+.+.|+  +|.+++++|||.+++-+..
T Consensus        10 ~~~i~I~--Gq~v~~LLDTGAD~TVI~~   35 (104)
T d2fmba_          10 TTIVLIN--DTPLNVLLDTGADTSVLTT   35 (104)
T ss_dssp             EEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred             EEEEEEC--CEEEEEEEeCCCCeEEEcc
Confidence            5778888  6999999999999998864


No 37 
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]}
Probab=67.23  E-value=2.7  Score=38.16  Aligned_cols=42  Identities=26%  Similarity=0.217  Sum_probs=32.5

Q ss_pred             ccceeEEeccCccceEEEeceEEEcCeeeeeecCCceEEEcCCCCCcccCHH
Q 010230          255 KGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTT  306 (514)
Q Consensus       255 ~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDSGtt~~~lP~~  306 (514)
                      .|.++.+|+.++..|.++   |.||..++       .++||||++.+++|..
T Consensus         3 ~~~~~~~~~~~d~~Y~~~---i~vG~~~~-------~v~~DTGSs~~Wv~~~   44 (323)
T d1bxoa_           3 SGVATNTPTANDEEYITP---VTIGGTTL-------NLNFDTGSADLWVFST   44 (323)
T ss_dssp             CEEEEEEECGGGSCEEEE---EEETTEEE-------EEEEETTCCCEEECBT
T ss_pred             CcccccccccCCcEEEEE---EEECCccE-------EEEEECCCcceEEECC
Confidence            456788898887788655   67886543       4899999999999964


No 38 
>d3ecga1 b.50.1.1 (A:1-99) Human immunodeficiency virus type 2 (HIV-2) protease {Human immunodeficiency virus type 2 [TaxId: 11709]}
Probab=64.40  E-value=3.2  Score=30.70  Aligned_cols=26  Identities=27%  Similarity=0.275  Sum_probs=23.4

Q ss_pred             EEEEEecCCCceEEEEeeCCCCceeeeC
Q 010230           91 FGEIGIGTPPQNFTVIFDTGSSNLWVPS  118 (514)
Q Consensus        91 ~~~i~iGtP~Q~~~v~~DTGSs~~wv~~  118 (514)
                      .+.+.||  +|...+++|||.+++-+..
T Consensus        10 ~vtvkIg--Gq~~eaLLDTGADdTVle~   35 (99)
T d3ecga1          10 VVTAYIE--GQPVEVLLDTGADDSIVAG   35 (99)
T ss_dssp             EEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred             eEEEEEC--CEEeeeecccCCCceeeec
Confidence            6889999  6999999999999999854


No 39 
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]}
Probab=57.98  E-value=4.9  Score=36.25  Aligned_cols=42  Identities=19%  Similarity=0.162  Sum_probs=32.2

Q ss_pred             ccceeEEeccCccceEEEeceEEEcCeeeeeecCCceEEEcCCCCCcccCHH
Q 010230          255 KGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTT  306 (514)
Q Consensus       255 ~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDSGtt~~~lP~~  306 (514)
                      .|.++..|+..+.+|.+   .|.||..++       .++||||++.+++|..
T Consensus         3 ~~~~~~~~~~~d~~Y~~---~i~iG~q~~-------~l~~DTGSs~~Wv~~~   44 (323)
T d1izea_           3 TGSVTTNPTSNDEEYIT---QVTVGDDTL-------GLDFDTGSADLWVFSS   44 (323)
T ss_dssp             CEEEEEEECGGGCCEEE---EEEETTEEE-------EEEEETTCCCCEECBT
T ss_pred             cCcccccccCCccEEEE---EEEECCeeE-------EEEEECCCcceEEEcC
Confidence            46677888877777764   578886543       4899999999999964


No 40 
>d1nsoa_ b.50.1.1 (A:) Mason-Pfizer monkey virus protease {Simian retrovirus 1, SRV-1 [TaxId: 11942]}
Probab=47.69  E-value=4.9  Score=30.48  Aligned_cols=28  Identities=14%  Similarity=0.141  Sum_probs=23.0

Q ss_pred             EEEEEecCCCceEEEEeeCCCCceeeeCCC
Q 010230           91 FGEIGIGTPPQNFTVIFDTGSSNLWVPSSK  120 (514)
Q Consensus        91 ~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~  120 (514)
                      .+.+.|+  +|.+++++|||-+++-+...+
T Consensus        11 ~~~v~I~--G~~v~~LLDTGAD~TVI~~~~   38 (107)
T d1nsoa_          11 SLTLWLD--DKMFTGLINTGADVTIIKLED   38 (107)
T ss_dssp             CEEEEET--TEEEEECCCSSCSSCBCCGGG
T ss_pred             EEEEEEC--CEEEEeeecCCCCcEEEeccc
Confidence            4567787  799999999999999886543


No 41 
>d1hvca_ b.50.1.1 (A:) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=42.30  E-value=9.5  Score=31.72  Aligned_cols=26  Identities=27%  Similarity=0.348  Sum_probs=23.4

Q ss_pred             EEEEEecCCCceEEEEeeCCCCceeeeC
Q 010230           91 FGEIGIGTPPQNFTVIFDTGSSNLWVPS  118 (514)
Q Consensus        91 ~~~i~iGtP~Q~~~v~~DTGSs~~wv~~  118 (514)
                      .+.|.||  +|...+++|||.+++-+..
T Consensus        10 ~VtVkIg--GQ~~eaLLDTGADDTVLe~   35 (203)
T d1hvca_          10 LVTIRIG--GQLKEALLDTGADDTVLEE   35 (203)
T ss_dssp             EEEEESS--SCEEEEEECTTCSSEEEEC
T ss_pred             eEEEEEC--CEEEEEEecCCCCceEEec
Confidence            6889999  6999999999999999854


No 42 
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]}
Probab=27.78  E-value=21  Score=31.49  Aligned_cols=43  Identities=21%  Similarity=0.299  Sum_probs=28.6

Q ss_pred             cceeEEeccC--ccceEEEeceEEEcCeeeeeecCCceEEEcCCCCCcccCHH
Q 010230          256 GEHTYVPVTQ--KGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTT  306 (514)
Q Consensus       256 g~l~~~p~~~--~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDSGtt~~~lP~~  306 (514)
                      |+.+.+|+.+  +..|.+   .|.||.-     .....+++|||++++++|..
T Consensus         1 ~~~~svPl~~~~d~~Y~~---~i~vGtP-----~q~~~~~~DTGSs~~Wv~~~   45 (323)
T d3cmsa_           1 GEVASVPLTNYLDSQYFG---KIYLGTP-----PQEFTVLFDTGSSDFWVPSI   45 (323)
T ss_dssp             CCCEEEEEEEETTTEEEE---EEEETTT-----TEEEEEEEETTCCCEEEEBT
T ss_pred             CCceEEeeEeccCCEEEE---EEEECCC-----CEEEEEEEECCCCceEEecC
Confidence            4567788743  345654   4677642     22345899999999999753


No 43 
>d1hvca_ b.50.1.1 (A:) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=23.27  E-value=33  Score=28.34  Aligned_cols=39  Identities=21%  Similarity=0.207  Sum_probs=30.0

Q ss_pred             CccEEeceeccCceEEEEEEecCCCceEEEEeeCCCCceeeeCCC
Q 010230           76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSK  120 (514)
Q Consensus        76 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~  120 (514)
                      +...+.++.-    =.+.+.||  +|-..+++|||.+++-+..-+
T Consensus       103 dGP~i~~wqr----p~vt~ki~--gq~~ealldtgaddtv~e~~~  141 (203)
T d1hvca_         103 SGPQITLWQR----PLVTIKIG--GQLKEALLDTGADDTVLEEMS  141 (203)
T ss_dssp             TSSEECSSSC----CEEEEEET--TEEEEEEECTTCSSCEEESCC
T ss_pred             CCCceeeccc----ceEEEecc--hhHHHHHhcccCCceEEeccc
Confidence            3455555543    47899999  599999999999999986543


No 44 
>d2fmba_ b.50.1.1 (A:) EIAV protease {Equine infectious anemia virus [TaxId: 11665]}
Probab=22.20  E-value=27  Score=25.84  Aligned_cols=32  Identities=16%  Similarity=0.166  Sum_probs=25.1

Q ss_pred             EeceEEEcCeeeeeecCCceEEEcCCCCCcccCHHHHHH
Q 010230          272 DMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQ  310 (514)
Q Consensus       272 ~l~~i~v~~~~~~~~~~~~~aiiDSGtt~~~lP~~~~~~  310 (514)
                      .+..+.|+|+.+.       +++|||+..+.+.......
T Consensus         9 P~~~i~I~Gq~v~-------~LLDTGAD~TVI~~~~~p~   40 (104)
T d2fmba_           9 PTTIVLINDTPLN-------VLLDTGADTSVLTTAHYNR   40 (104)
T ss_dssp             CEEEEEETTEEEE-------EEECTTCSSCEEEHHHHHH
T ss_pred             eEEEEEECCEEEE-------EEEeCCCCeEEEcccccCc
Confidence            4456778888775       8999999999998876653


Done!