BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010237
(514 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225424558|ref|XP_002282031.1| PREDICTED: ALBINO3-like protein 1, chloroplastic [Vitis vinifera]
gi|296081405|emb|CBI16838.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/515 (69%), Positives = 412/515 (80%), Gaps = 11/515 (2%)
Query: 1 MATSLSIHQN-LILSPFPNRTDIQTPLFTRTHFGLKPFLRGSICVAKFGLRP-DPNSADG 58
M+T + H + L LSPFP+RT I+TP+ +HF P R S+ VA+FG RP + AD
Sbjct: 1 MSTFFAFHTSPLHLSPFPHRTQIRTPILHPSHFPGLPNRR-SLGVARFGFRPFHSDGADA 59
Query: 59 V-KELLGVAERLLFTLADAAVSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHV 117
V +L G E LL+T+ADAAVS+SD KQ+ DWLSGITN METVLKVLK G+STLHV
Sbjct: 60 VIGDLFGRVETLLYTIADAAVSASDG----KQSGDWLSGITNYMETVLKVLKGGLSTLHV 115
Query: 118 PYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETAR 177
PYAYGFAIILLTV+VKAATFPLTKKQVES+MAMRSL PQ+KAIQ+RYAGDQERIQLETAR
Sbjct: 116 PYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRSLQPQIKAIQQRYAGDQERIQLETAR 175
Query: 178 LYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQN 237
LYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSL+GPTTIAARQN
Sbjct: 176 LYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLSGPTTIAARQN 235
Query: 238 GSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALT 297
GSGISWLFPFVDGHPPLGWSDT AYLVLP+LL+VSQYISV+I+QSSQ+NDP++K+SQALT
Sbjct: 236 GSGISWLFPFVDGHPPLGWSDTLAYLVLPMLLIVSQYISVQIMQSSQSNDPSLKTSQALT 295
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDERLD- 356
FLPLMIGYFALSVPSGLSLYWFTNN+LSTAQQVWLQK GGA+ P+KQFSD I+ E L
Sbjct: 296 KFLPLMIGYFALSVPSGLSLYWFTNNILSTAQQVWLQKLGGAQIPVKQFSDDIEKEELSQ 355
Query: 357 INKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRRQQREEEKRKAAEAAAKG 416
I K V ++STKKE +Q EKLT+EG RPGE+FKQI+EQEARRRQQREEEK KA EAAA
Sbjct: 356 IQKPVFEINSTKKEPKQTEKLTSEGLRPGERFKQIKEQEARRRQQREEEKTKAEEAAANR 415
Query: 417 NQTINGEQEREASILGSAKGVQTDLVDKDDENFPSV-TGDNASNIGVAINGNISSHEFKE 475
T NG + EA+ DLVD +++F S+ T N+SNI V +N +S+ + K+
Sbjct: 416 IPTTNGGYKNEANSTKREYRTGGDLVDGGNDSFQSLTTTHNSSNIEVVVNDELSNEDSKD 475
Query: 476 NQDTISVFRTGDNEVSANSEVDGRNEQQSQENLGK 510
Q + V RT +E S N EVD R+EQ L K
Sbjct: 476 EQK-MYVTRTESSENSVNYEVDVRDEQHINGKLEK 509
>gi|356569211|ref|XP_003552798.1| PREDICTED: ALBINO3-like protein 1, chloroplastic-like [Glycine max]
Length = 534
Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust.
Identities = 334/519 (64%), Positives = 402/519 (77%), Gaps = 30/519 (5%)
Query: 1 MATSLSIHQNLILSPFPNRTDIQTPLFTRTHF----GLKPFLRGSICVAKFGLRP----D 52
MA L N++ +P NR+ P +H + FLRGS+ VA+FG +P +
Sbjct: 1 MAALLPCAPNVVSAPLGNRSTCHFPHRPYSHAFSGSTARHFLRGSLTVARFGFQPGFLPE 60
Query: 53 PNSADGV-KELLGVAERLLFTLADAAVSSSDAV---TTTKQNSDWLSGITNVMETVLKVL 108
P+ A+GV +EL G AE LL+T+ADAAVSSSD V TT KQ++DWLSGI N METVLKVL
Sbjct: 61 PDEAEGVLRELFGRAEGLLYTIADAAVSSSDTVAASTTAKQSNDWLSGIANYMETVLKVL 120
Query: 109 KDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQ 168
KDG+S LHVPYAYGFAIILLTV+VKAATFPLTKKQVES++AMR+L PQVKAIQ++YAGDQ
Sbjct: 121 KDGLSALHVPYAYGFAIILLTVLVKAATFPLTKKQVESALAMRTLQPQVKAIQQQYAGDQ 180
Query: 169 ERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG 228
ERIQLETARLYKLA INPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG
Sbjct: 181 ERIQLETARLYKLANINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG 240
Query: 229 PTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDP 288
PTT+AARQNGSGISW+FPFVDGHPPLGWSDT AYLVLPVLL+VSQYISV+I+QSSQ NDP
Sbjct: 241 PTTVAARQNGSGISWIFPFVDGHPPLGWSDTLAYLVLPVLLIVSQYISVQIMQSSQPNDP 300
Query: 289 NMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQF-S 347
NMKSSQALT LPLMIGYFALSVPSGLSLYW TNN+LSTAQQVWLQK GGAK+P++Q
Sbjct: 301 NMKSSQALTKVLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVRQVPD 360
Query: 348 DIIKDERLDINKSVPGLSSTK-KEARQAEKLTTEGPRPGEKFKQIREQEARRRQQREEEK 406
DI+K++ + KS+ L+STK +EARQ+EK T+EGP+PGE+FK I+EQEARRRQ++EEE+
Sbjct: 361 DIMKNDLTQVQKSISKLNSTKAEEARQSEK-TSEGPQPGERFKLIKEQEARRRQRKEEER 419
Query: 407 R--KAAEAAAKGNQTINGEQEREASILGSAKGVQTDLVDKDDENFPSVTGDNASNIGVAI 464
+ +AA AK ++T E G ++ V D + PS++G +
Sbjct: 420 KALEAAARKAKIDETFEKTVEEGNQTGGDLVVEKSRFVASDTD--PSISG--------VV 469
Query: 465 NGNISSHEFKENQDTISVFRTGDNEVSA---NSEVDGRN 500
NGN S + + NQ++ S+ T +N+ SA N E++ +N
Sbjct: 470 NGNPLSKDLEGNQNSTSISETENNDGSAHFNNVEINEKN 508
>gi|449450415|ref|XP_004142958.1| PREDICTED: ALBINO3-like protein 1, chloroplastic-like [Cucumis
sativus]
Length = 506
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 328/495 (66%), Positives = 381/495 (76%), Gaps = 46/495 (9%)
Query: 1 MATSLSIHQNLILSPFPNRTDIQTPLFTRTHF-GL---KPFLRGSICVAKFGLRP----D 52
MA+ N + S FP+R PLF F GL KPFLRGS+ VA+FG +P D
Sbjct: 1 MASISPYRPNFVFSSFPSRVPNSNPLFHGVQFRGLSHHKPFLRGSLAVARFGFKPEFLPD 60
Query: 53 PNSADG-VKELLGVAERLLFTLADAAVSSS-DAVTTTKQNSDWLSGITNVMETVLKVLKD 110
P++A+G V++L G AE L+T+ADAAVS+S D VTT KQ DW +GITN ME+VLK+LKD
Sbjct: 61 PDNAEGFVRDLFGKAESFLYTIADAAVSASPDNVTTVKQTDDWFTGITNYMESVLKILKD 120
Query: 111 GMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQER 170
G+STLHVPYAYGFAIILLTV+VKAATFPLTKKQVES+MAMRSL PQVKA+Q+RYAGDQER
Sbjct: 121 GLSTLHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRSLQPQVKAVQQRYAGDQER 180
Query: 171 IQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPT 230
IQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVA+EGLLTEGFFWIPSLAGPT
Sbjct: 181 IQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPT 240
Query: 231 TIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNM 290
TIA+RQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISV+I+QSSQNNDP+M
Sbjct: 241 TIASRQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVQIMQSSQNNDPSM 300
Query: 291 KSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSD-I 349
KSSQA+T FL LMIGYFALSVPSGLSLYW TNN+LSTAQQ WLQK GGAK KQF D I
Sbjct: 301 KSSQAITQFLLLMIGYFALSVPSGLSLYWLTNNILSTAQQAWLQKAGGAKTLDKQFIDEI 360
Query: 350 IKDE--RLDINKSVPGLSSTKKE--ARQAEKLTTEGPRPGEKFKQIREQEARRRQQREEE 405
+K E ++ + P L+S ARQ EK T EG +PGE+FK+++EQEAR RQQREEE
Sbjct: 361 MKQEEKQVRVQSEAPKLNSISSSTVARQEEKPTAEGLKPGERFKRLKEQEARLRQQREEE 420
Query: 406 KRKAAEAAAKGNQTINGEQEREASILGSAKGVQTDLVDKDDENFPSVTGDNASNIGVAIN 465
+RKA E+A + T+N GD ++ +GV +N
Sbjct: 421 ERKAEESAKAESLTVND-------------------------------GDKSATVGVVVN 449
Query: 466 GNISSHEFKENQDTI 480
G++S + KE+Q++I
Sbjct: 450 GSLSRQDVKEDQNSI 464
>gi|255547956|ref|XP_002515035.1| conserved hypothetical protein [Ricinus communis]
gi|223546086|gb|EEF47589.1| conserved hypothetical protein [Ricinus communis]
Length = 499
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 346/526 (65%), Positives = 396/526 (75%), Gaps = 60/526 (11%)
Query: 10 NLILSPFPN--RTDIQTPL-------FTRTHFGLKPFLRGSICVAKFGLRPD--PNSADG 58
NL+LSPF N +T PL F+ TH KPFLRGS+ VA++G +P P+ +G
Sbjct: 12 NLVLSPFHNQIKTTAFNPLLRPQFGSFSTTH---KPFLRGSVFVARYGFKPGLFPDPDEG 68
Query: 59 -VKELLGVAERLLFTLADAAVSSSDAVTTTKQNS---DWLSGITNVMETVLKVLKDGMST 114
+K+L AE LL+T+ADAAVSSSD + TT + + DWLSGIT+ METVLKVL++G+S
Sbjct: 69 LIKDLFTKAESLLYTIADAAVSSSDTINTTTKQTNNNDWLSGITSYMETVLKVLQNGLSG 128
Query: 115 LHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLE 174
LHVPYAYGFAIILLTV+VKAATFPLTKKQVES+MAMRSL PQ+KAIQ++YAG+QE+IQLE
Sbjct: 129 LHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRSLQPQIKAIQQQYAGNQEKIQLE 188
Query: 175 TARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAA 234
TARLYKLAGINP AGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTT+AA
Sbjct: 189 TARLYKLAGINPFAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAA 248
Query: 235 RQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQ 294
RQNGSGISWLFPFVDGHPPLGW DTFAYLVLPVLLVVSQYISV+I+QSSQNNDPNMKSSQ
Sbjct: 249 RQNGSGISWLFPFVDGHPPLGWYDTFAYLVLPVLLVVSQYISVQIMQSSQNNDPNMKSSQ 308
Query: 295 ALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDER 354
A+T LPLMIGYFALSVPSGLSLYW TNN+LSTAQQVWLQK GGAK+P+ Q D ++ ++
Sbjct: 309 AITQLLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVSQ-EDHLRVQK 367
Query: 355 ----LDINKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRRQQREEEKRKAA 410
L + KSV L STK +A Q EKLT EG RPGE+FKQ++EQEA+R+QQREEEKRKA
Sbjct: 368 SVDQLQVQKSVSELDSTKAKAIQVEKLTPEGLRPGERFKQLKEQEAKRKQQREEEKRKAE 427
Query: 411 EAAAKGNQTINGE---QEREASILGSAKGVQTDLVDKDDENFPSVTGDNASNIGVAINGN 467
EAAA +QT NG ERE GV D D+ F ++S GV ING
Sbjct: 428 EAAAISSQTANGSLHASERE-------NGVSMSGADVVDDKF----AHDSSAAGVIINGE 476
Query: 468 ISSHEFKENQDTISVFRTGDNEVSANSEVDGRNEQQSQENLGKVNL 513
IS NSE GR EQQS EN KV +
Sbjct: 477 IS-----------------------NSESSGRVEQQSDENKQKVQI 499
>gi|449494582|ref|XP_004159588.1| PREDICTED: ALBINO3-like protein 1, chloroplastic-like [Cucumis
sativus]
Length = 477
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 318/436 (72%), Positives = 361/436 (82%), Gaps = 15/436 (3%)
Query: 1 MATSLSIHQNLILSPFPNRTDIQTPLFTRTHF-GL---KPFLRGSICVAKFGLRP----D 52
MA+ N + S FP+R PLF F GL KPFLRGS+ VA+FG +P D
Sbjct: 1 MASISPYRPNFVFSSFPSRVPNSNPLFHGVQFRGLSHHKPFLRGSLAVARFGFKPEFLPD 60
Query: 53 PNSADG-VKELLGVAERLLFTLADAAVSSS-DAVTTTKQNSDWLSGITNVMETVLKVLKD 110
P++A+G V++L G AE L+T+ADAAVS+S D VTT KQ DW +GITN ME+VLK+LKD
Sbjct: 61 PDNAEGFVRDLFGKAESFLYTIADAAVSASPDNVTTVKQTDDWFTGITNYMESVLKILKD 120
Query: 111 GMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQER 170
G+STLHVPYAYGFAIILLTV+VKAATFPLTKKQVES+MAMRSL PQVKA+Q+RYAGDQER
Sbjct: 121 GLSTLHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRSLQPQVKAVQQRYAGDQER 180
Query: 171 IQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPT 230
IQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVA+EGLLTEGFFWIPSLAGPT
Sbjct: 181 IQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPT 240
Query: 231 TIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNM 290
TIA+RQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISV+I+QSSQNNDP+M
Sbjct: 241 TIASRQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVQIMQSSQNNDPSM 300
Query: 291 KSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSD-I 349
KSSQA+T FLPLMIGYFALSVPSGLSLYW TNN+LSTAQQ WLQK GGAK KQF D I
Sbjct: 301 KSSQAITQFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQAWLQKAGGAKTLDKQFIDEI 360
Query: 350 IKDE--RLDINKSVPGLSSTKKE--ARQAEKLTTEGPRPGEKFKQIREQEARRRQQREEE 405
+K E ++ + P L+S ARQ EK T EG +PGE+FK+++EQEAR RQQREEE
Sbjct: 361 MKQEEKQVRVQSEAPKLNSISSSTVARQEEKPTAEGLKPGERFKRLKEQEARLRQQREEE 420
Query: 406 KRKAAEAAAKGNQTIN 421
+RKA E+A + T+N
Sbjct: 421 ERKAEESAKAESLTVN 436
>gi|343171890|gb|AEL98649.1| ALBINO3-like protein, partial [Silene latifolia]
Length = 458
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 298/479 (62%), Positives = 369/479 (77%), Gaps = 35/479 (7%)
Query: 1 MATSLSIH-QNLILSPFPNRTD--IQTPLFTRTHFGLKPFLRGSICVAKFGLR-----PD 52
M+T LS H + +L P+P+ T ++P F R KP + VAKFGL PD
Sbjct: 1 MSTFLSPHLSHPLLYPYPSPTTRTHKSPFFHRFS-NPKPTSSAPLVVAKFGLLNSGQLPD 59
Query: 53 PNSADGVKELLGVAERLLFTLADAAVSSSDAV----TTTKQNSDWLSGITNVMETVLKVL 108
P S VKEL G AE +L+TLADAAV+++D V T +KQN DWLSGIT+ ME++LKVL
Sbjct: 60 PES---VKELFGRAEGILYTLADAAVNNTDVVDASNTVSKQNGDWLSGITSSMESILKVL 116
Query: 109 KDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQ 168
KDG++++HVPY+YGFAIILLT++VKAATFPL+KKQVES+MAMRSL PQ+KAIQ+RYAGDQ
Sbjct: 117 KDGLTSVHVPYSYGFAIILLTILVKAATFPLSKKQVESAMAMRSLQPQIKAIQKRYAGDQ 176
Query: 169 ERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG 228
ERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVA+EGLLTEGFFWIPSLAG
Sbjct: 177 ERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAG 236
Query: 229 PTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDP 288
PTT+AAR +GSGISWLFPFVDGHPPLGWSDT AYLVLPVLL+VSQYIS++I+QSSQ +DP
Sbjct: 237 PTTVAARASGSGISWLFPFVDGHPPLGWSDTAAYLVLPVLLIVSQYISIQIMQSSQPDDP 296
Query: 289 NMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFS- 347
N+KSSQA+T FLPLMIGYF+LSVPSGLSLYWFTNN+LST QQVWLQK GGAK+P+ Q S
Sbjct: 297 NLKSSQAITKFLPLMIGYFSLSVPSGLSLYWFTNNILSTLQQVWLQKMGGAKNPVGQISG 356
Query: 348 DIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRRQQREEEKR 407
D++K+E+ K+V S + E + + GPRPG++FK+++E+EARR++Q EEE
Sbjct: 357 DLLKEEQPQPAKTVYEAKSIQAEV----DIPSTGPRPGDRFKKLKEEEARRKRQSEEENM 412
Query: 408 KAAEAAAKGNQTINGEQEREASILGSAKGVQTDLVDKDDENFPSVTGDNASNIGVAING 466
K + ++ +++G G ++LV+ + + + + SN GVA NG
Sbjct: 413 KT--------------EVKQDNLVGPTNGSVSELVNGRNTDQSTTSVSATSNSGVAANG 457
>gi|343171892|gb|AEL98650.1| ALBINO3-like protein, partial [Silene latifolia]
Length = 458
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 297/479 (62%), Positives = 366/479 (76%), Gaps = 35/479 (7%)
Query: 1 MATSLSIH-QNLILSPFPNRTD--IQTPLFTRTHFGLKPFLRGSICVAKFGLR-----PD 52
M+T LS H + +L P+P+ T ++P F R KP + VAKFGL PD
Sbjct: 1 MSTFLSPHLSHPLLYPYPSPTTRTHKSPFFHRFS-NPKPTSSAPLVVAKFGLLNSGQLPD 59
Query: 53 PNSADGVKELLGVAERLLFTLADAAVSSSDAV----TTTKQNSDWLSGITNVMETVLKVL 108
P S VKEL G AE +L+TLADAAV+++D V T +KQN DWLSGIT+ ME++LKVL
Sbjct: 60 PES---VKELFGRAEGILYTLADAAVNNTDVVDASNTVSKQNGDWLSGITSSMESILKVL 116
Query: 109 KDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQ 168
KDG++++HVPY+YGFAIILLTV+VKAATFPL+KKQVES+MAMRSL PQ+KAIQ+RYAGDQ
Sbjct: 117 KDGLTSVHVPYSYGFAIILLTVLVKAATFPLSKKQVESAMAMRSLQPQIKAIQKRYAGDQ 176
Query: 169 ERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG 228
ERIQLETAR YKLAGINPLAGCLPTLATIPVWIGLYRALSNVA+EGLLTEGFFWIPSLAG
Sbjct: 177 ERIQLETARSYKLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAG 236
Query: 229 PTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDP 288
PTT+AAR +GSGISWLFPFVDGHPPLGWSDT AYLVLPVLL+VSQYIS++I+QSSQ +DP
Sbjct: 237 PTTVAARASGSGISWLFPFVDGHPPLGWSDTAAYLVLPVLLIVSQYISIQIMQSSQPDDP 296
Query: 289 NMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFS- 347
N+KSSQA+T FLPLMIGYF+LSVPSGLSLYWFTNN+LST QQVWLQK GGAK+P+ Q S
Sbjct: 297 NLKSSQAITKFLPLMIGYFSLSVPSGLSLYWFTNNILSTLQQVWLQKMGGAKNPVGQISG 356
Query: 348 DIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRRQQREEEKR 407
D++K+E+ K+V S + E + + GPR G +FK+++E+EARR++Q EEE
Sbjct: 357 DLLKEEQPQPAKTVYEAKSIQAEV----DIPSTGPRQGNRFKKLKEEEARRKRQSEEENM 412
Query: 408 KAAEAAAKGNQTINGEQEREASILGSAKGVQTDLVDKDDENFPSVTGDNASNIGVAING 466
K + ++ +++G G ++LV+ + + + + SN GVA NG
Sbjct: 413 KT--------------EVKQDNLVGPTNGSVSELVNGRNTDQSTTSVSATSNSGVAANG 457
>gi|356540205|ref|XP_003538580.1| PREDICTED: ALBINO3-like protein 1, chloroplastic-like [Glycine max]
Length = 543
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 332/515 (64%), Positives = 394/515 (76%), Gaps = 30/515 (5%)
Query: 1 MATSLSIHQNLILSPF-PNRTDIQTPLFTRTHF----GLKPFLRGSICVAKFGLRPD--- 52
MA L N++ P NR+ P +H + FLRGS+ VA+FG +PD
Sbjct: 1 MAALLPCAPNIVYGPLLGNRSTSHLPHRPHSHAFSGSTTRHFLRGSLTVARFGFKPDFLP 60
Query: 53 -PNSADGV-KELLGVAERLLFTLADAAVSSSDAVT--------TTKQNSDWLSGITNVME 102
P+ A+GV +EL G AE LL+T+ADAAVSSS + + KQ++DWLSGI N ME
Sbjct: 61 EPDEAEGVLRELFGRAEGLLYTIADAAVSSSSSSSSDTVAASYAAKQSNDWLSGIANYME 120
Query: 103 TVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQE 162
TVLKVLKDG+S LHVPYAYGFAIILLTV+VKAATFPLTKKQVESS+AMR+L PQVKAIQ+
Sbjct: 121 TVLKVLKDGLSALHVPYAYGFAIILLTVLVKAATFPLTKKQVESSLAMRTLQPQVKAIQQ 180
Query: 163 RYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFW 222
RYAGDQERIQLETARLYKLA INPLAGCLPTLATIPVWIGLYRALS+VADEGLLTEGFFW
Sbjct: 181 RYAGDQERIQLETARLYKLANINPLAGCLPTLATIPVWIGLYRALSSVADEGLLTEGFFW 240
Query: 223 IPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQS 282
IPSLAGPTT+AARQNGSGISWLFPFVDGHPPLGWSDT AYLVLPVLLVVSQYISV+I+QS
Sbjct: 241 IPSLAGPTTVAARQNGSGISWLFPFVDGHPPLGWSDTLAYLVLPVLLVVSQYISVQIMQS 300
Query: 283 SQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDP 342
SQ NDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYW TNN+LSTAQQVWLQK GGAK+P
Sbjct: 301 SQPNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNP 360
Query: 343 MKQF-SDIIKDERLDINKSVPGL-SSTKKEARQAEKLTTEGPRPGEKFKQIREQEA--RR 398
++Q DI+K++ + KS+ L S+T +EAR +EK T+EGP+PGE+FK I+EQEA ++
Sbjct: 361 VRQVPDDIMKNDLTQVQKSMSKLNSTTAEEARLSEK-TSEGPQPGERFKLIKEQEARRKQ 419
Query: 399 RQQREEEKRKAAEAAAKGNQTINGEQEREASILGSAKGVQTDLVDKDDENFPSVTGDNAS 458
+++ EEEKRKA EAAA+ + ++ E + G DLV + S+ D
Sbjct: 420 QREEEEEKRKALEAAARETK-VDKTLEETVEVENQTGG---DLVVEKSR---SLASDTDP 472
Query: 459 NIGVAINGNISSHEFKENQDTISVFRTGDNEVSAN 493
+I +NGN S + + NQ++ S T +NE SA+
Sbjct: 473 SISGVVNGNPLSKDLEGNQNSTSTSETENNEGSAH 507
>gi|147772782|emb|CAN71675.1| hypothetical protein VITISV_036218 [Vitis vinifera]
Length = 623
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 330/594 (55%), Positives = 391/594 (65%), Gaps = 85/594 (14%)
Query: 1 MATSLSIHQN-LILSPFPNRTDIQTPLFTRTHF--------------GLKPF-------- 37
M+T + H + L LSPFP+RT I+TP+ +HF G +PF
Sbjct: 1 MSTFFAFHTSPLHLSPFPHRTPIRTPILHPSHFPGLPNRRSLGVARFGFRPFHSDGADAV 60
Query: 38 ----------LRGSICVAKFGLRPDPNSADGVKELLGVAERLL-------------FTLA 74
L +I A S D + + E +L + +
Sbjct: 61 IGDLFGRVETLLYTIADAAVSASDGKQSGDWLSGITNYMETVLKNVLKPWVDKLIWYEMP 120
Query: 75 DAAVSSS--------DAVTTTKQNSD----WLSGITNVMETVLKVLKDGMSTLHVPYAYG 122
+ +++ +T +Q D + I L+VLK G+STLHVPYAYG
Sbjct: 121 ELSITQFRLFGLDVLHCMTWKRQGYDTSRVCIVTIEKRKFCXLEVLKGGLSTLHVPYAYG 180
Query: 123 FAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLA 182
FAIILLTV+VKAATFPLTKKQVES+MAMRSL PQ+KAIQ+RYAGDQERIQLETARLYKLA
Sbjct: 181 FAIILLTVLVKAATFPLTKKQVESAMAMRSLQPQIKAIQQRYAGDQERIQLETARLYKLA 240
Query: 183 GINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGIS 242
GINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSL+GPTTIAARQNGSGIS
Sbjct: 241 GINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLSGPTTIAARQNGSGIS 300
Query: 243 WLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQS-------------------- 282
WLFPFVDGHPPLGWSDT AYLVLP+LL+VSQYISV+I+QS
Sbjct: 301 WLFPFVDGHPPLGWSDTLAYLVLPMLLIVSQYISVQIMQSSQQWELLGHLKGVPKLELET 360
Query: 283 ----SQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGG 338
SQ+NDP++K+SQALT FLPLMIGYFALSVPSGLSLYWFTNN+LSTAQQVWLQK GG
Sbjct: 361 MIGLSQSNDPSLKTSQALTKFLPLMIGYFALSVPSGLSLYWFTNNILSTAQQVWLQKLGG 420
Query: 339 AKDPMKQFSDIIKDERLD-INKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEAR 397
A+ P+KQFSD I+ E L I K V ++STKKE +Q EKLT+EG RPGE+FKQI+EQEAR
Sbjct: 421 AQIPVKQFSDDIEKEELSQIQKPVFEINSTKKEPKQTEKLTSEGLRPGERFKQIKEQEAR 480
Query: 398 RRQQREEEKRKAAEAAAKGNQTINGEQEREASILGSAKGVQTDLVDKDDENFPSV-TGDN 456
RRQQREEEK KA EAAA T NG + EA+ DLVD +++F S+ T N
Sbjct: 481 RRQQREEEKTKAEEAAANRIPTTNGGYKNEANSTKREYRTGGDLVDGGNDSFQSLTTTHN 540
Query: 457 ASNIGVAINGNISSHEFKENQDTISVFRTGDNEVSANSEVDGRNEQQSQENLGK 510
+S I V +N +S+ + K+ Q + V RT +E S N EVD R+EQ L K
Sbjct: 541 SSXIEVVVNDELSNEDSKDEQK-MYVTRTESSENSVNYEVDVRDEQHINGKLEK 593
>gi|240254150|ref|NP_173858.5| ALBINO3-like protein 1 [Arabidopsis thaliana]
gi|223590242|sp|Q9FYL3.3|ALB31_ARATH RecName: Full=ALBINO3-like protein 1, chloroplastic; AltName:
Full=Arabidopsis thaliana envelope membrane integrase;
AltName: Full=Protein ALBINA 4; Short=Ath4; AltName:
Full=Protein ARTEMIS; Flags: Precursor
gi|91680591|emb|CAJ45566.1| Alb protein [Arabidopsis thaliana]
gi|332192418|gb|AEE30539.1| ALBINO3-like protein 1 [Arabidopsis thaliana]
Length = 499
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 308/520 (59%), Positives = 384/520 (73%), Gaps = 42/520 (8%)
Query: 1 MATSLSIH-QNLILSPFPNRTDIQTPLFTRTHFGLKPFL---RGSICVAKFGLRPDPNSA 56
M++++S+ +LILS F +Q F R+ F P R VA+ G RPD S
Sbjct: 1 MSSTISLKPTHLILSSFSTGKVLQ---FRRSRFSHTPSSSSSRYRTLVAQLGFRPD--SF 55
Query: 57 DGVKELLGVAERLLFTLADAAVSSSD-----AVTTTK--QNSDWLSGITNVMETVLKVLK 109
D +K+ AE LL+T+ADAAVSSS+ A TTTK Q++DW SGI N MET+LKVLK
Sbjct: 56 DFIKDH---AENLLYTIADAAVSSSETFESVAGTTTKTTQSNDWFSGIANYMETILKVLK 112
Query: 110 DGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQE 169
DG+ST+HVPY+YGFAIILLTV+VKAATFPLTKKQVES+MAM+SL PQ+KAIQERYAGDQE
Sbjct: 113 DGLSTVHVPYSYGFAIILLTVLVKAATFPLTKKQVESAMAMKSLTPQIKAIQERYAGDQE 172
Query: 170 RIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGP 229
+IQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGP
Sbjct: 173 KIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGP 232
Query: 230 TTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPN 289
TT+AARQNGSGISWLFPF++GHPPLGW DT AYLVLP+LLV SQY+S++I+QSSQ+NDP
Sbjct: 233 TTVAARQNGSGISWLFPFIEGHPPLGWPDTLAYLVLPLLLVFSQYLSIQIMQSSQSNDPA 292
Query: 290 MKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDI 349
MKSSQA+T LPLMIGYFALSVPSGLSLYW TNN+LSTAQQVWLQK+GGAK+P+++F+++
Sbjct: 293 MKSSQAVTKLLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKYGGAKNPVEKFTNL 352
Query: 350 I----KDERLDINKSVPGLSSTKKE-----ARQAEKLTTEGPRPGEKFKQIREQEARRRQ 400
+ K ++++ + S P + + E + EK+T E P+PGE+F+ ++EQEA+RR
Sbjct: 353 VTKEDKTQQIEKSFSEPLVQKSVSELKIPREKGGEKVTPECPKPGERFRLLKEQEAKRR- 411
Query: 401 QREEEKRKAAEAAAKGNQTINGEQEREASILGSAKGVQTDLVDKDDENFPSVTGDNASNI 460
RE+E+R+ AEAA T ++ E S T +V +DD+ D S+
Sbjct: 412 -REKEERQKAEAALSNQNTDKAHEQDEKS--------DTAIVAEDDKKTELSAVDETSDG 462
Query: 461 GVAINGNISSHEFKENQDTISVFRTG-DNEVSANSEVDGR 499
VA+NG S ++++ T F G D E + E + R
Sbjct: 463 TVAVNGKPS---IQKDETTNGTFGIGHDTEQQHSHETEKR 499
>gi|357463169|ref|XP_003601866.1| Inner membrane protein ALBINO3 [Medicago truncatula]
gi|355490914|gb|AES72117.1| Inner membrane protein ALBINO3 [Medicago truncatula]
Length = 532
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 328/525 (62%), Positives = 391/525 (74%), Gaps = 31/525 (5%)
Query: 1 MATSLSIHQNLILSPFPNRTDI-QTPLFTRTHF---GLKPFLRGSICVAKFGLRP----D 52
M+ L ++ +PF NR+ PL +H K FLRGS+ V +FG P +
Sbjct: 1 MSALLPCTPTILSAPFGNRSRTNHLPLRPHSHALPGSTKRFLRGSLSVTRFGFHPGFLPE 60
Query: 53 PNSADGV-KELLGVAERLLFTLADAAVSSSD-AVTTT--KQNSDWLSGITNVMETVLKVL 108
P A+ V +EL AE L+T+ADAAVSSSD A+TTT KQN+DW SGITN ME +LKVL
Sbjct: 61 PEDAEFVLRELFNRAEGFLYTIADAAVSSSDIAITTTTAKQNNDWFSGITNYMEIILKVL 120
Query: 109 KDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQ 168
KDG+STLHVPYAYGFAII+LT++VK ATFPLT+KQVES+MAMRSL PQVKAIQ++YA DQ
Sbjct: 121 KDGLSTLHVPYAYGFAIIMLTILVKVATFPLTRKQVESAMAMRSLQPQVKAIQKQYARDQ 180
Query: 169 ERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG 228
ERIQLETARLY LA INPLAGCLP L T PVWIGLYRA SNVADEGLL EGFFWIPSL+G
Sbjct: 181 ERIQLETARLYTLANINPLAGCLPVLLTTPVWIGLYRAFSNVADEGLLNEGFFWIPSLSG 240
Query: 229 PTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDP 288
PTTIAARQNGS ISWLFPFVDGHPPLGW DT AYLVLPVLLVVSQYIS++I+QSSQ P
Sbjct: 241 PTTIAARQNGSAISWLFPFVDGHPPLGWPDTLAYLVLPVLLVVSQYISLQIMQSSQATGP 300
Query: 289 NMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQ-FS 347
N KSSQ L LPL+IGYFALSVPSGLSLYWFTNN+LST QQ+WLQK GGAK+P++Q
Sbjct: 301 NAKSSQVLNKVLPLVIGYFALSVPSGLSLYWFTNNILSTLQQIWLQKLGGAKNPLRQVLD 360
Query: 348 DIIKD-ERLDINKSVPGLSSTK-KEARQAEKLTTEGPRPGEKFKQIREQEARRRQQREEE 405
D +K+ + + + KSV L+STK +EAR+ KLT+EGPRPG+KFKQ+ EQEA+++QQREEE
Sbjct: 361 DNVKNVDLMQVQKSVSNLNSTKIEEARKDSKLTSEGPRPGDKFKQLMEQEAKKKQQREEE 420
Query: 406 KRKAAEAAAKGNQTINGEQEREASILGSAKGVQTDLVDKDDENFPSVTGDNASNIGVAIN 465
KRKA EAAAK N N EQ E V DLV +N SV D +I IN
Sbjct: 421 KRKAEEAAAKAN---NHEQTVEG-----GNQVVNDLV----KNSQSVADDTDPSISGVIN 468
Query: 466 GNISSHEFKENQDTISVFRTGDNEVSAN-SEVDGRN-EQQSQENL 508
GN + + NQ++ S T ++E SA+ + V+ +N E++S+E L
Sbjct: 469 GN--GKDLEGNQNSTSTSDTANDEGSAHLNAVNKKNLEKESREVL 511
>gi|9743337|gb|AAF97961.1|AC000103_11 F21J9.16 [Arabidopsis thaliana]
Length = 519
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 308/540 (57%), Positives = 384/540 (71%), Gaps = 62/540 (11%)
Query: 1 MATSLSIH-QNLILSPFPNRTDIQTPLFTRTHFGLKPFL---RGSICVAKFGLRPDPNSA 56
M++++S+ +LILS F +Q F R+ F P R VA+ G RPD S
Sbjct: 1 MSSTISLKPTHLILSSFSTGKVLQ---FRRSRFSHTPSSSSSRYRTLVAQLGFRPD--SF 55
Query: 57 DGVKELLGVAERLLFTLADAAVSSSD-----AVTTTK--QNSDWLSGITNVMETVLKVLK 109
D +K+ AE LL+T+ADAAVSSS+ A TTTK Q++DW SGI N MET+LKVLK
Sbjct: 56 DFIKDH---AENLLYTIADAAVSSSETFESVAGTTTKTTQSNDWFSGIANYMETILKVLK 112
Query: 110 DGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQV--------------------ESSMA 149
DG+ST+HVPY+YGFAIILLTV+VKAATFPLTKKQV ES+MA
Sbjct: 113 DGLSTVHVPYSYGFAIILLTVLVKAATFPLTKKQVFTMISFLVHVIELVVYSLQVESAMA 172
Query: 150 MRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSN 209
M+SL PQ+KAIQERYAGDQE+IQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSN
Sbjct: 173 MKSLTPQIKAIQERYAGDQEKIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSN 232
Query: 210 VADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLL 269
VADEGLLTEGFFWIPSLAGPTT+AARQNGSGISWLFPF++GHPPLGW DT AYLVLP+LL
Sbjct: 233 VADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPFIEGHPPLGWPDTLAYLVLPLLL 292
Query: 270 VVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
V SQY+S++I+QSSQ+NDP MKSSQA+T LPLMIGYFALSVPSGLSLYW TNN+LSTAQ
Sbjct: 293 VFSQYLSIQIMQSSQSNDPAMKSSQAVTKLLPLMIGYFALSVPSGLSLYWLTNNILSTAQ 352
Query: 330 QVWLQKFGGAKDPMKQFSDII----KDERLDINKSVPGLSSTKKE-----ARQAEKLTTE 380
QVWLQK+GGAK+P+++F++++ K ++++ + S P + + E + EK+T E
Sbjct: 353 QVWLQKYGGAKNPVEKFTNLVTKEDKTQQIEKSFSEPLVQKSVSELKIPREKGGEKVTPE 412
Query: 381 GPRPGEKFKQIREQEARRRQQREEEKRKAAEAAAKGNQTINGEQEREASILGSAKGVQTD 440
P+PGE+F+ ++EQEA+RR RE+E+R+ AEAA T ++ E S T
Sbjct: 413 CPKPGERFRLLKEQEAKRR--REKEERQKAEAALSNQNTDKAHEQDEKS--------DTA 462
Query: 441 LVDKDDENFPSVTGDNASNIGVAINGNISSHEFKENQDTISVFRTG-DNEVSANSEVDGR 499
+V +DD+ D S+ VA+NG S ++++ T F G D E + E + R
Sbjct: 463 IVAEDDKKTELSAVDETSDGTVAVNGKPS---IQKDETTNGTFGIGHDTEQQHSHETEKR 519
>gi|108712061|gb|ABF99856.1| ARTEMIS protein, chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|222626153|gb|EEE60285.1| hypothetical protein OsJ_13341 [Oryza sativa Japonica Group]
Length = 510
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 272/465 (58%), Positives = 334/465 (71%), Gaps = 33/465 (7%)
Query: 59 VKELLGVAERLLFTLADAAVSSSDAVT------TTKQNSDWLSGITNVMETVLKVLKDGM 112
V EL G E L+T+ADAAVS+S V T + DWLSGITN METVLKVLKDG+
Sbjct: 59 VGELFGRVEAFLYTVADAAVSASPEVVQGGGGGTKEAAGDWLSGITNSMETVLKVLKDGL 118
Query: 113 STLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQ 172
S LHVPY YGFAIILLTV+VKAATFPLTKKQVES++AMRSL PQVKAIQERYAGDQERIQ
Sbjct: 119 SALHVPYPYGFAIILLTVLVKAATFPLTKKQVESAIAMRSLQPQVKAIQERYAGDQERIQ 178
Query: 173 LETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTI 232
LETARLYKL+ ++PLAGCLPTL TIPVWIGLYRALSNVA+EGLLTEGFFWIPSLAGPTTI
Sbjct: 179 LETARLYKLSDVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTI 238
Query: 233 AARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKS 292
AARQ+G GISWLFPF DGHPPLGWSDT AYLVLPVLLV+SQY+S +++Q QNNDP+ +
Sbjct: 239 AARQSGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYVSSQVMQPPQNNDPSQQG 298
Query: 293 SQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSD-IIK 351
+QA+ FLPL+IGYFALSVPSGLSLYW TNN+LSTAQQVWLQK GGAK+P+K++ D + K
Sbjct: 299 AQAVVKFLPLLIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVKEYIDKLAK 358
Query: 352 DERLDINKSVPGLSST------KKEARQAEKLTTEGPRPGEKFKQIREQEARRRQQREEE 405
+E ++ K P + S K A Q + + GP+ GE+F++++E+E+RR+ E
Sbjct: 359 EESTNLGKPEPAIKSDPLPKVGKPPASQEPEPS--GPQRGERFRKLKEEESRRKVFL--E 414
Query: 406 KRKAAEAAAKGNQTINGEQEREASILGSAKGVQTDLVDKDD--ENFPSVTGDNA----SN 459
K + E A ++G+Q +AS D +D+ + EN P + N S
Sbjct: 415 KAEQTEQAGTQAGIVDGKQNSDAS---------GDNIDEQESHENEPIIANGNGGLSHST 465
Query: 460 IGVAINGNISSHEFKENQDTISVFRTGDNEVSANSEVDGRNEQQS 504
+ NG++ +E+ D+ S + A+ D NEQ +
Sbjct: 466 NEMIPNGSMKEDIIQESTDSHSSVIDPTSH-DAHKSRDEENEQDA 509
>gi|41469653|gb|AAS07376.1| putative inner membrane protein (with alternative splicing) [Oryza
sativa Japonica Group]
gi|108712060|gb|ABF99855.1| ARTEMIS protein, chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 489
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 255/384 (66%), Positives = 303/384 (78%), Gaps = 17/384 (4%)
Query: 59 VKELLGVAERLLFTLADAAVSSSDAVT------TTKQNSDWLSGITNVMETVLKVLKDGM 112
V EL G E L+T+ADAAVS+S V T + DWLSGITN METVLKVLKDG+
Sbjct: 59 VGELFGRVEAFLYTVADAAVSASPEVVQGGGGGTKEAAGDWLSGITNSMETVLKVLKDGL 118
Query: 113 STLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQ 172
S LHVPY YGFAIILLTV+VKAATFPLTKKQVES++AMRSL PQVKAIQERYAGDQERIQ
Sbjct: 119 SALHVPYPYGFAIILLTVLVKAATFPLTKKQVESAIAMRSLQPQVKAIQERYAGDQERIQ 178
Query: 173 LETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTI 232
LETARLYKL+ ++PLAGCLPTL TIPVWIGLYRALSNVA+EGLLTEGFFWIPSLAGPTTI
Sbjct: 179 LETARLYKLSDVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTI 238
Query: 233 AARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKS 292
AARQ+G GISWLFPF DGHPPLGWSDT AYLVLPVLLV+SQY+S +++Q QNNDP+ +
Sbjct: 239 AARQSGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYVSSQVMQPPQNNDPSQQG 298
Query: 293 SQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSD-IIK 351
+QA+ FLPL+IGYFALSVPSGLSLYW TNN+LSTAQQVWLQK GGAK+P+K++ D + K
Sbjct: 299 AQAVVKFLPLLIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVKEYIDKLAK 358
Query: 352 DERLDINKSVPGLSST------KKEARQAEKLTTEGPRPGEKFKQIREQEARRRQQREEE 405
+E ++ K P + S K A Q + GP+ GE+F++++E+E+RR+ E
Sbjct: 359 EESTNLGKPEPAIKSDPLPKVGKPPASQEPE--PSGPQRGERFRKLKEEESRRKVFL--E 414
Query: 406 KRKAAEAAAKGNQTINGEQEREAS 429
K + E A ++G+Q +AS
Sbjct: 415 KAEQTEQAGTQAGIVDGKQNSDAS 438
>gi|224107717|ref|XP_002314575.1| 60 kDa inner membrane protein [Populus trichocarpa]
gi|222863615|gb|EEF00746.1| 60 kDa inner membrane protein [Populus trichocarpa]
Length = 292
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 240/291 (82%), Positives = 271/291 (93%), Gaps = 2/291 (0%)
Query: 62 LLGVAERLLFTLADAAVSSSDAV--TTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPY 119
L G AE +++T+ADAAVS+SD V ++T QNSDWLSGIT +E+ LKVLKDG+S +H+PY
Sbjct: 1 LFGRAESIVYTIADAAVSNSDQVVDSSTTQNSDWLSGITYGLESTLKVLKDGLSAVHLPY 60
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
AYGFAIILLTV+VKAATFPL+KKQVES+MAMRSL PQ+KAIQ+RYAGDQERIQLETARLY
Sbjct: 61 AYGFAIILLTVLVKAATFPLSKKQVESAMAMRSLQPQIKAIQQRYAGDQERIQLETARLY 120
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
KLAGINPLAGCLPTLATIPVWIGLYRALSNVA+EGLLTEGFFWIPSLAGPT IA+RQNGS
Sbjct: 121 KLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTAIASRQNGS 180
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
GISWLFPFVDGHPPLGWSDT AYLVLPV+LVVSQYISV+I+QSSQ++DPN+K+SQA+T F
Sbjct: 181 GISWLFPFVDGHPPLGWSDTVAYLVLPVMLVVSQYISVQIMQSSQSDDPNVKNSQAITKF 240
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDII 350
LPLMIGYF+LSVPSGLSLYW TNN+LSTAQQVWLQK GGAK+PM + SD I
Sbjct: 241 LPLMIGYFSLSVPSGLSLYWLTNNILSTAQQVWLQKSGGAKNPMMKSSDDI 291
>gi|414873899|tpg|DAA52456.1| TPA: hypothetical protein ZEAMMB73_865472 [Zea mays]
Length = 495
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 258/428 (60%), Positives = 322/428 (75%), Gaps = 31/428 (7%)
Query: 61 ELLGVAERLLFTLADAAVSSSDAVTTTKQN---SDWLSGITNVMETVLKVLKDGMSTLHV 117
+LLG E LL+T+ADAAVS+ + DWLS ITN METVLKVLKDG+ +LHV
Sbjct: 52 DLLGRVEALLYTVADAAVSAEPVAAAGTKEAAAGDWLSSITNSMETVLKVLKDGLLSLHV 111
Query: 118 PYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETAR 177
PY+YGFAIILLTV+VKAATFPLTKKQVES++AMRSL PQVK IQERYAGDQERIQLETAR
Sbjct: 112 PYSYGFAIILLTVLVKAATFPLTKKQVESALAMRSLQPQVKTIQERYAGDQERIQLETAR 171
Query: 178 LYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQN 237
LYKL+G++PLAGCLPTL TIPVWIGLYRALSNVA+EGLLTEGFFWIPSLAGPTTIAA+QN
Sbjct: 172 LYKLSGVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAAQQN 231
Query: 238 GSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALT 297
G GISWLFPF DGHPPLGWSDT AYLVLPVLLV+SQYIS +++Q Q+NDP+ + +QA+T
Sbjct: 232 GQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYISSQVMQPPQSNDPSQQGAQAVT 291
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSD-IIKDERLD 356
FLPL+IGYFALSVPSGL LYW TNN+LSTAQQVWLQK GGAK+P+K++ D + ++E +
Sbjct: 292 KFLPLLIGYFALSVPSGLGLYWLTNNILSTAQQVWLQKLGGAKNPVKEYIDKLSREESTN 351
Query: 357 INKS--------VPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRRQQREEEKRK 408
+ K+ +P LS +A+ +++L GP+ GE+F++++E+E+RR++ + ++
Sbjct: 352 VQKNGSTVQSKPLPKLS----KAQPSQELKPTGPQRGERFRKLKEEESRRKEVLGQAEQS 407
Query: 409 AAEAAAKGNQTINGEQEREASILGSAKGVQTDLVDKDDENFPSVTGDNASNIGVAINGNI 468
+ ++G Q +AS G DK+DE P G +N +N
Sbjct: 408 EQSSFES--SVVDGAQISDAS-----SG------DKNDEQEPHEIGPIVANSNGGVNH-- 452
Query: 469 SSHEFKEN 476
S +E EN
Sbjct: 453 SRNEKTEN 460
>gi|357114741|ref|XP_003559153.1| PREDICTED: ALBINO3-like protein 1, chloroplastic-like [Brachypodium
distachyon]
Length = 513
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/343 (69%), Positives = 286/343 (83%), Gaps = 10/343 (2%)
Query: 92 DWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMR 151
DWLSGIT METVLKVLKDG+STLH+PY+YGFAIILLTV++K ATFPLTKKQVES++AMR
Sbjct: 100 DWLSGITGSMETVLKVLKDGLSTLHIPYSYGFAIILLTVLIKGATFPLTKKQVESALAMR 159
Query: 152 SLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVA 211
SL PQVKAIQERYAGDQERIQLETARLYKL+G++PLAGCLPTL TIPVWIGLYRALSNVA
Sbjct: 160 SLQPQVKAIQERYAGDQERIQLETARLYKLSGVDPLAGCLPTLVTIPVWIGLYRALSNVA 219
Query: 212 DEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVV 271
+EGLLTEGFFWIPSLAGPTTIAARQ+G GISWLFPF DGHPPLGWSDT AYLVLPVLLV+
Sbjct: 220 NEGLLTEGFFWIPSLAGPTTIAARQSGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVI 279
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
SQY+S +I+Q SQ+NDP+ + +QA FLPL+IGYFALSVPSGLSLYW TNN+LS+AQQV
Sbjct: 280 SQYVSAQIMQPSQSNDPSQQGAQAALKFLPLLIGYFALSVPSGLSLYWLTNNVLSSAQQV 339
Query: 332 WLQKFGGAKDPMKQFSD-IIKDERLDINKSVPGLSST------KKEARQAEKLTTEGPRP 384
WLQK GGAK+P+K++ D + +DE +++K P + + K EA Q +K GP+
Sbjct: 340 WLQKLGGAKNPVKEYIDKLARDESANVDKCEPAVKTEGLPKAGKSEASQVQK--PSGPQR 397
Query: 385 GEKFKQIREQEARRRQQREEEKRKAAEAAAKGNQTINGEQERE 427
GE+F+++ E+E+RR+ + EE+ + EA + +GEQ E
Sbjct: 398 GERFRKLLEEESRRK-RLEEQSEQTEEAGVEPGALDDGEQNSE 439
>gi|125546414|gb|EAY92553.1| hypothetical protein OsI_14293 [Oryza sativa Indica Group]
Length = 533
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 254/400 (63%), Positives = 298/400 (74%), Gaps = 39/400 (9%)
Query: 59 VKELLGVAERLLFTLADAAVSSSDAVT------TTKQNSDWLSGITNVMETVLKVLKDGM 112
V EL G E L+T+ADAAVS+S V T + DWLSGITN METVLKVLKDG+
Sbjct: 59 VGELFGRVEAFLYTVADAAVSASPEVVQGGGGGTKEAAGDWLSGITNSMETVLKVLKDGL 118
Query: 113 STLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQ 172
S LHVPY YGFAIILLTV+VKAATFPLTKKQVES++AMRSL PQVKAIQERYAGDQERIQ
Sbjct: 119 SALHVPYPYGFAIILLTVLVKAATFPLTKKQVESAIAMRSLQPQVKAIQERYAGDQERIQ 178
Query: 173 LETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTI 232
LETARLYKL+G++PLAGCLPTL TIPVWIGLYRALSNVA+EGLLTEGFFWIPSLAGPTTI
Sbjct: 179 LETARLYKLSGVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTI 238
Query: 233 AARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKS 292
AARQ+G GISWLFPF DGHPPLGWSDT AYLVLPVLLV+SQY+S +++Q QNNDP+ +
Sbjct: 239 AARQSGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYVSSQVMQPPQNNDPSQQG 298
Query: 293 SQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQF--SDII 350
+QA+ FLPL+IGYFALSVPSGLSLYW TNN+LSTAQQVWLQK GGAK+P+K++ S +
Sbjct: 299 AQAVVKFLPLLIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVKEYMISSLK 358
Query: 351 KDERLDINKSVPGLSSTKKEARQAEKLTTEGPRP---------------------GEKFK 389
K++ + L S R L PRP EKF+
Sbjct: 359 KNQLI--------LESPSLLLRVILSLKLVNPRPVKSQNQVDHNVVKEILVGILVNEKFR 410
Query: 390 QIREQEARRRQQREEEKRKAAEAAAKGNQTINGEQEREAS 429
+++E+E+RR+ EK + E A ++G+Q +AS
Sbjct: 411 KLKEEESRRKVFL--EKAEQTEQAGTQAGIVDGKQNSDAS 448
>gi|224100107|ref|XP_002311746.1| 60 kDa inner membrane protein [Populus trichocarpa]
gi|222851566|gb|EEE89113.1| 60 kDa inner membrane protein [Populus trichocarpa]
Length = 281
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 229/281 (81%), Positives = 259/281 (92%), Gaps = 2/281 (0%)
Query: 62 LLGVAERLLFTLADAAVSSSDAV--TTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPY 119
L G AE +++T+ADAAVS+ + V ++TKQNSDWLSGIT+ +E+ LKVLKDG+S LHVPY
Sbjct: 1 LFGRAESIIYTIADAAVSNPEQVVDSSTKQNSDWLSGITSCLESTLKVLKDGLSALHVPY 60
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
AYGFAIILLTV+VKAATFPL+KKQVES+MAMRSL PQ+KA+Q+ YAGDQERIQLETARLY
Sbjct: 61 AYGFAIILLTVLVKAATFPLSKKQVESAMAMRSLQPQIKAVQQLYAGDQERIQLETARLY 120
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
KLAGINPLAGCLPTLATIPVWIGLYRALSNVA+EGLLTEGFFWIPSLAGPTTIA RQNGS
Sbjct: 121 KLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAERQNGS 180
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
GISWLFPFVDG PPLGWSDT AYLVLP +LVV QY+SV+I+QSSQ++DPN+K+SQA+ F
Sbjct: 181 GISWLFPFVDGQPPLGWSDTVAYLVLPAMLVVLQYMSVQIMQSSQSDDPNVKNSQAIMKF 240
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
LPLMIGYF+LSVPSGLSLYW TNN+LST QQVWLQK GGAK
Sbjct: 241 LPLMIGYFSLSVPSGLSLYWLTNNILSTTQQVWLQKLGGAK 281
>gi|326489461|dbj|BAK01711.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 512
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 255/438 (58%), Positives = 322/438 (73%), Gaps = 41/438 (9%)
Query: 59 VKELLGVAERLLFTLADAAVSSSDAVTTTKQNS-----DWLSGITNVMETVLKVLKDGMS 113
V +LLG E L+T+ADAAV+++ A +++ DW +GIT METVLKVLKDG+S
Sbjct: 60 VGQLLGRVEAFLYTVADAAVAAAPAAEGGAKDAAAASGDWFAGITGSMETVLKVLKDGLS 119
Query: 114 TLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQL 173
TLHVPY YGFAIILLTV++K ATFPLTKKQVES++AMRSL PQVKAIQER+AGDQERIQL
Sbjct: 120 TLHVPYPYGFAIILLTVLIKGATFPLTKKQVESALAMRSLQPQVKAIQERHAGDQERIQL 179
Query: 174 ETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIA 233
ETA LYKL+G++PLAGCLPTL TIPVWIGLY+ALSNVA+EGLLTEGFFWIPSLAGPTTIA
Sbjct: 180 ETAHLYKLSGVDPLAGCLPTLVTIPVWIGLYKALSNVANEGLLTEGFFWIPSLAGPTTIA 239
Query: 234 ARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSS 293
AR++G GISW+FPF DGHPPLGW DT AYLVLPVLLV+SQY+S +I+QSSQ+NDP+ + +
Sbjct: 240 ARESGQGISWIFPFTDGHPPLGWPDTLAYLVLPVLLVISQYVSAQIMQSSQSNDPSQQGA 299
Query: 294 QALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDII-KD 352
QA FLPL+IGYFALSVPSGLSLYW TNN+LS+AQQVWLQK GGAK+P++++ D + ++
Sbjct: 300 QAAVKFLPLLIGYFALSVPSGLSLYWLTNNVLSSAQQVWLQKLGGAKNPVQEYIDKLGRE 359
Query: 353 ERLDINKSVPGLSSTKKEA--RQAEKLTTEGPRPGE-----KFKQIREQEARRRQQREEE 405
E ++ K P + K+EA + + + P+P E +FK++ EQE+RR+Q E+
Sbjct: 360 ESTNVGKHEP---ADKREALPKAGKPQPGQVPKPSEPQRGGRFKKLMEQESRRKQLLEQT 416
Query: 406 KRKAAEAAAKGNQTINGEQEREASILGSAKGVQTDLVDKDDENFPSVTGDNASN--IGVA 463
K+ + A + E + GSA D DE G++ N I +
Sbjct: 417 KQTEESSIAI---------DEEHNFDGSAP-------DSKDEQ-----GESHENEPISAS 455
Query: 464 INGNIS--SHEFKENQDT 479
NG +S +HE N+ T
Sbjct: 456 SNGGLSHDTHEATPNRST 473
>gi|238478612|ref|NP_001154364.1| ALBINO3-like protein 1 [Arabidopsis thaliana]
gi|332192419|gb|AEE30540.1| ALBINO3-like protein 1 [Arabidopsis thaliana]
Length = 462
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 275/520 (52%), Positives = 347/520 (66%), Gaps = 79/520 (15%)
Query: 1 MATSLSIH-QNLILSPFPNRTDIQTPLFTRTHFGLKPFL---RGSICVAKFGLRPDPNSA 56
M++++S+ +LILS F +Q F R+ F P R VA+ G RPD S
Sbjct: 1 MSSTISLKPTHLILSSFSTGKVLQ---FRRSRFSHTPSSSSSRYRTLVAQLGFRPD--SF 55
Query: 57 DGVKELLGVAERLLFTLADAAVSSSD-----AVTTTK--QNSDWLSGITNVMETVLKVLK 109
D +K+ AE LL+T+ADAAVSSS+ A TTTK Q++DW SGI N MET+LKV
Sbjct: 56 DFIKDH---AENLLYTIADAAVSSSETFESVAGTTTKTTQSNDWFSGIANYMETILKV-- 110
Query: 110 DGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQE 169
ES+MAM+SL PQ+KAIQERYAGDQE
Sbjct: 111 -----------------------------------ESAMAMKSLTPQIKAIQERYAGDQE 135
Query: 170 RIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGP 229
+IQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGP
Sbjct: 136 KIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGP 195
Query: 230 TTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPN 289
TT+AARQNGSGISWLFPF++GHPPLGW DT AYLVLP+LLV SQY+S++I+QSSQ+NDP
Sbjct: 196 TTVAARQNGSGISWLFPFIEGHPPLGWPDTLAYLVLPLLLVFSQYLSIQIMQSSQSNDPA 255
Query: 290 MKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDI 349
MKSSQA+T LPLMIGYFALSVPSGLSLYW TNN+LSTAQQVWLQK+GGAK+P+++F+++
Sbjct: 256 MKSSQAVTKLLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKYGGAKNPVEKFTNL 315
Query: 350 I----KDERLDINKSVPGLSSTKKE-----ARQAEKLTTEGPRPGEKFKQIREQEARRRQ 400
+ K ++++ + S P + + E + EK+T E P+PGE+F+ ++EQEA+RR
Sbjct: 316 VTKEDKTQQIEKSFSEPLVQKSVSELKIPREKGGEKVTPECPKPGERFRLLKEQEAKRR- 374
Query: 401 QREEEKRKAAEAAAKGNQTINGEQEREASILGSAKGVQTDLVDKDDENFPSVTGDNASNI 460
RE+E+R+ AEAA T ++ E S T +V +DD+ D S+
Sbjct: 375 -REKEERQKAEAALSNQNTDKAHEQDEKS--------DTAIVAEDDKKTELSAVDETSDG 425
Query: 461 GVAINGNISSHEFKENQDTISVFRTG-DNEVSANSEVDGR 499
VA+NG S ++++ T F G D E + E + R
Sbjct: 426 TVAVNGKPS---IQKDETTNGTFGIGHDTEQQHSHETEKR 462
>gi|148905926|gb|ABR16124.1| unknown [Picea sitchensis]
Length = 471
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/458 (53%), Positives = 320/458 (69%), Gaps = 34/458 (7%)
Query: 18 NRTDIQTPLFTRTHFGLKPFL--RGSICVAKFGLR--PDPNSADG---VKELLGVAERLL 70
R I P ++ +P R +F L+ P P+ D + L+ AE LL
Sbjct: 17 QRASISRPSYSSFFTPRRPLFESRRVKVKVRFSLQQLPPPDQLDAYVDIPRLVSRAEGLL 76
Query: 71 FTLADAAVSSSDAVT-TTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLT 129
+TLADAAV++SD+V K N W I + +E LKVLKDG++T+HVPYAYGFAII LT
Sbjct: 77 YTLADAAVATSDSVAPAQKTNGSWFGFIADGLEGFLKVLKDGLTTVHVPYAYGFAIITLT 136
Query: 130 VIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAG 189
V+VK ATFPLTKKQVES++AM++L P++KAIQERY GDQERIQLET+RLYK AG+NPLAG
Sbjct: 137 VLVKIATFPLTKKQVESTLAMQNLQPKIKAIQERYKGDQERIQLETSRLYKQAGVNPLAG 196
Query: 190 CLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVD 249
CLPTLAT+PVWIGLY+ALSNVA+EGLLTEGFFWIPSLAGPTTIAARQNG+GISWLFPFVD
Sbjct: 197 CLPTLATMPVWIGLYQALSNVANEGLLTEGFFWIPSLAGPTTIAARQNGTGISWLFPFVD 256
Query: 250 GHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFAL 309
G PPLGWSDTFAYLVLPVLLV SQYIS++I+Q+ Q NDP+ K++Q FLPLMIGYF+L
Sbjct: 257 GQPPLGWSDTFAYLVLPVLLVGSQYISMQIMQTPQANDPSQKNTQIALKFLPLMIGYFSL 316
Query: 310 SVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKK 369
SVPSGLS+YW TNN LSTAQQ+WL+K GGAK P+ +++ G+ S +
Sbjct: 317 SVPSGLSIYWLTNNFLSTAQQLWLRKLGGAK-PI-------------VSEDGNGIISAGQ 362
Query: 370 EARQAEKLTTE--GPRPGEKFKQIREQEARRRQQREEE------KRKAAEAAAKGNQTIN 421
R + K T+ R GE+F+Q + +EAR++ E + ++ + + +++ +
Sbjct: 363 AKRSSSKAVTDLKEARRGERFRQRKAEEARKKADPERQTTTDVKEQNVYQTVSLSSESDD 422
Query: 422 GEQEREASILGSAKGVQTDLVDKDDENFPSVTGDNASN 459
++E++ G AK + ++ + SV G +A+N
Sbjct: 423 DQEEKD----GKAKTISSEQESLEQVYAASVNGIDANN 456
>gi|148905860|gb|ABR16092.1| unknown [Picea sitchensis]
Length = 471
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/425 (57%), Positives = 307/425 (72%), Gaps = 26/425 (6%)
Query: 46 KFGLR--PDPNSADG---VKELLGVAERLLFTLADAAVSSSDAVT-TTKQNSDWLSGITN 99
+F L+ P P+ D + L+ AE LL+TLADAAV++SD+V K N W I +
Sbjct: 47 RFSLQQLPPPDQLDAYVDIPRLVSRAEGLLYTLADAAVATSDSVAPAQKTNGSWFGFIAD 106
Query: 100 VMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKA 159
+E LKVLKDG++T+HVPYAYGFAII LTV+VK ATFPLTKKQVES++AM++L P++KA
Sbjct: 107 GLEGFLKVLKDGLTTVHVPYAYGFAIITLTVLVKIATFPLTKKQVESTLAMQNLQPKIKA 166
Query: 160 IQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEG 219
IQERY GDQERIQLET+RLYK AG+NPLAGCLPTLAT+PVWIGLY+ALSNVA+EGLLTEG
Sbjct: 167 IQERYKGDQERIQLETSRLYKQAGVNPLAGCLPTLATMPVWIGLYQALSNVANEGLLTEG 226
Query: 220 FFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKI 279
FFWIPSLAGPTTIAARQNG+GISWLFPFVDG PPLGWSDTFAYLVLPVLLV SQYIS++I
Sbjct: 227 FFWIPSLAGPTTIAARQNGTGISWLFPFVDGQPPLGWSDTFAYLVLPVLLVGSQYISMQI 286
Query: 280 IQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGA 339
+Q+ Q NDP+ K++Q FLPLMIGYF+LSVPSGLS+YW TNN LSTAQQ+WL+K GGA
Sbjct: 287 MQTPQANDPSQKNTQIALKFLPLMIGYFSLSVPSGLSIYWLTNNFLSTAQQLWLRKLGGA 346
Query: 340 KDPMKQFSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTE--GPRPGEKFKQIREQEAR 397
K P+ +++ G+ S + R + K T+ R GE+F+Q + +EAR
Sbjct: 347 K-PI-------------VSEDGNGIISAGQAKRSSSKAVTDLKEARRGERFRQRKAEEAR 392
Query: 398 RRQQREEEKRKAAEAAAKGNQTINGEQER---EASILGSAKGVQTDLVDKDDENFPSVTG 454
++ E + E QT++ ER + G AK + ++ + SV G
Sbjct: 393 KKADPERQTTTDVE-EQNVYQTVSLSSERDDYQEEKDGKAKTISSEQESLEQVYAASVNG 451
Query: 455 DNASN 459
+A+N
Sbjct: 452 IDANN 456
>gi|297826255|ref|XP_002881010.1| hypothetical protein ARALYDRAFT_901831 [Arabidopsis lyrata subsp.
lyrata]
gi|297326849|gb|EFH57269.1| hypothetical protein ARALYDRAFT_901831 [Arabidopsis lyrata subsp.
lyrata]
Length = 458
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/358 (61%), Positives = 280/358 (78%), Gaps = 23/358 (6%)
Query: 54 NSADGVKELLGVAERLLFTLADAAVSSSDAVTTT-----KQNSDWLSGITNVMETVLKVL 108
+S+ + +L AE LL+T+ADAAV +D+V +T +++ W I++ ME VLK+L
Sbjct: 64 DSSVDIGAILTRAESLLYTIADAAVVGADSVVSTDSSAVQKSGGWFGFISDGMELVLKIL 123
Query: 109 KDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQ 168
KDG+S +HVPYAYGFAIILLT+IVKAAT+PLTK+QVES++AM++L P++KAIQ+RYAG+Q
Sbjct: 124 KDGLSAVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQ 183
Query: 169 ERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG 228
ERIQLET+RLYK AG+NPLAGCLPTLATIPVWIGLY+ALSNVA+EGLLTEGFFWIPSL G
Sbjct: 184 ERIQLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGG 243
Query: 229 PTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDP 288
PTTIAARQ+GSGISWLFPFVDGHPPLGW DT AYLVLPVLL+ SQY+S++I++ Q +DP
Sbjct: 244 PTTIAARQSGSGISWLFPFVDGHPPLGWYDTAAYLVLPVLLIASQYVSMEIMKPPQTDDP 303
Query: 289 NMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSD 348
K++ + FLPLMIGYFALSVPSGLS+YWFTNN+LSTAQQV+L+K GGAK M
Sbjct: 304 AQKNTLLVFKFLPLMIGYFALSVPSGLSIYWFTNNVLSTAQQVYLRKLGGAKPNM----- 358
Query: 349 IIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRRQQREEEK 406
DE +S A +A++ + GE+F+Q++EQE R ++ + K
Sbjct: 359 ---DEN----------ASKIISAGRAKRSIAQPDDAGERFRQLKEQEKRSKKNKAVAK 403
>gi|15226968|ref|NP_180446.1| inner membrane protein ALBINO3 [Arabidopsis thaliana]
gi|38372238|sp|Q8LBP4.2|ALB3_ARATH RecName: Full=Inner membrane protein ALBINO3, chloroplastic; Flags:
Precursor
gi|2209332|gb|AAB61458.1| chloroplast membrane protein ALBINO3 [Arabidopsis thaliana]
gi|3927828|gb|AAC79585.1| chloroplast membrane protein (ALBINO3) [Arabidopsis thaliana]
gi|27311661|gb|AAO00796.1| chloroplast membrane protein (ALBINO3) [Arabidopsis thaliana]
gi|30387561|gb|AAP31946.1| At2g28800 [Arabidopsis thaliana]
gi|330253078|gb|AEC08172.1| inner membrane protein ALBINO3 [Arabidopsis thaliana]
Length = 462
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/346 (62%), Positives = 272/346 (78%), Gaps = 23/346 (6%)
Query: 66 AERLLFTLADAAVSSSDAVTTT-----KQNSDWLSGITNVMETVLKVLKDGMSTLHVPYA 120
AE LL+T+ADAAV +D+V TT +++ W I++ ME VLK+LKDG+S +HVPYA
Sbjct: 80 AESLLYTIADAAVVGADSVVTTDSSAVQKSGGWFGFISDAMELVLKILKDGLSAVHVPYA 139
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YGFAIILLT+IVKAAT+PLTK+QVES++AM++L P++KAIQ+RYAG+QERIQLET+RLYK
Sbjct: 140 YGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYK 199
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
AG+NPLAGCLPTLATIPVWIGLY+ALSNVA+EGL TEGFFWIPSL GPT+IAARQ+GSG
Sbjct: 200 QAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTSIAARQSGSG 259
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
ISWLFPFVDGHPPLGW DT AYLVLPVLL+ SQY+S++I++ Q +DP K++ + FL
Sbjct: 260 ISWLFPFVDGHPPLGWYDTVAYLVLPVLLIASQYVSMEIMKPPQTDDPAQKNTLLVFKFL 319
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDERLDINKS 360
PLMIGYFALSVPSGLS+YW TNN+LSTAQQV+L+K GGAK M DE
Sbjct: 320 PLMIGYFALSVPSGLSIYWLTNNVLSTAQQVYLRKLGGAKPNM--------DEN------ 365
Query: 361 VPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRRQQREEEK 406
+S A +A++ + GE+F+Q++EQE R ++ + K
Sbjct: 366 ----ASKIISAGRAKRSIAQPDDAGERFRQLKEQEKRSKKNKAVAK 407
>gi|21592693|gb|AAM64642.1| chloroplast membrane protein ALBINO3 [Arabidopsis thaliana]
Length = 462
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/358 (60%), Positives = 275/358 (76%), Gaps = 23/358 (6%)
Query: 54 NSADGVKELLGVAERLLFTLADAAVSSSDAVTTT-----KQNSDWLSGITNVMETVLKVL 108
+S+ + + AE LL+T+ADAAV +D+V TT +++ W I++ ME VLK+L
Sbjct: 68 DSSVDIGSIFTRAESLLYTIADAAVVGADSVVTTDSSAVQKSGGWFGFISDAMELVLKIL 127
Query: 109 KDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQ 168
KDG+S +HVPYAYGFAIILLT+IVKAAT+PLTK+QVES++AM++L P++KAIQ+RYAG+Q
Sbjct: 128 KDGLSAVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQ 187
Query: 169 ERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG 228
ERIQLET+RLYK A +NPLAGCLPTLATIPVWIGLY+ALSN+A+EGL TEGFFWIPSL G
Sbjct: 188 ERIQLETSRLYKQASVNPLAGCLPTLATIPVWIGLYQALSNLANEGLFTEGFFWIPSLGG 247
Query: 229 PTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDP 288
PT+IAARQ+GSGISWLFPFVDGHPPLGW DT AYLVLPVLL+ SQY+S++I++ Q +DP
Sbjct: 248 PTSIAARQSGSGISWLFPFVDGHPPLGWYDTVAYLVLPVLLIASQYVSMEIMKPPQTDDP 307
Query: 289 NMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSD 348
K++ + FLPLMIGYFALSVPSGLS+YW TNN+LSTAQQV+L+K GGAK M
Sbjct: 308 AQKNTLLVFKFLPLMIGYFALSVPSGLSIYWLTNNVLSTAQQVYLRKLGGAKPNM----- 362
Query: 349 IIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRRQQREEEK 406
DE +S A +A++ + GE F+Q++EQE R ++ + K
Sbjct: 363 ---DEN----------ASKIISAGRAKRSIAQPDDAGETFRQLKEQEKRSKKNKAVAK 407
>gi|449464930|ref|XP_004150182.1| PREDICTED: inner membrane protein PPF-1, chloroplastic-like
[Cucumis sativus]
gi|449524424|ref|XP_004169223.1| PREDICTED: inner membrane protein PPF-1, chloroplastic-like
[Cucumis sativus]
Length = 453
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/399 (55%), Positives = 287/399 (71%), Gaps = 37/399 (9%)
Query: 54 NSADGVKELLGVAERLLFTLADAAV----------SSSDAVTTTKQNSDWLSGITNVMET 103
+S+ + ++ E LL+TLADAAV +S+ T ++N W I++ ME
Sbjct: 52 HSSLDFQAIVSRTEGLLYTLADAAVAVDSTLSAAATSTSPDTAVQKNGGWFGFISDAMEV 111
Query: 104 VLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQER 163
VLKVLK + +H+PY+YGFAIILLT+IVK ATFPLTK+QVES++AM++L P++KAIQ+R
Sbjct: 112 VLKVLKGSLEAVHIPYSYGFAIILLTIIVKVATFPLTKQQVESTLAMQNLQPKIKAIQQR 171
Query: 164 YAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWI 223
YAG+QERIQLET+RLY+ AG+NPLAGC PTLATIPVWIGLY+ALSNVA+EGLLTEGFFWI
Sbjct: 172 YAGNQERIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 231
Query: 224 PSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSS 283
PSL GPTTIAARQ+G+GISWL PFVDGHPPLGWSDT AYLVLPVLLV+SQY+S+++++
Sbjct: 232 PSLGGPTTIAARQSGAGISWLLPFVDGHPPLGWSDTAAYLVLPVLLVISQYVSMELMKPP 291
Query: 284 QNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPM 343
Q +DP K++ + FLPLMIGYF+LSVPSGLS+YWFTNN+LSTAQQVWL+K GGAK P+
Sbjct: 292 QTDDPAQKNTLLIFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAK-PV 350
Query: 344 KQFSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARR---RQ 400
+N++ PG+ + + R T E R G++F+Q+RE E + +
Sbjct: 351 -------------VNENAPGIITAGRAKR-----TPESERTGDRFRQVREDEKKNKLTKA 392
Query: 401 QREEEKRKAA-----EAAAKGNQTINGEQEREASILGSA 434
R E+ + A E G T GE E + SA
Sbjct: 393 ARSEDIQTLASESDTEDGYDGETTEKGEDGLEEAYASSA 431
>gi|357134175|ref|XP_003568693.1| PREDICTED: inner membrane protein ALBINO3, chloroplastic-like
[Brachypodium distachyon]
Length = 441
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 204/316 (64%), Positives = 260/316 (82%), Gaps = 18/316 (5%)
Query: 87 TKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVES 146
++ W I++ ME VLKVLKDG+S +HVPY+YGFAIILLT++VKAAT PLTK+QVES
Sbjct: 84 VQKKGGWFGFISDAMEVVLKVLKDGLSAVHVPYSYGFAIILLTIVVKAATLPLTKQQVES 143
Query: 147 SMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRA 206
++AM++L PQ+KAIQ+RYAG+QERIQLETARLYK AG+NPLAGCLPTLATIPVWIGLY+A
Sbjct: 144 TLAMQNLQPQLKAIQQRYAGNQERIQLETARLYKQAGVNPLAGCLPTLATIPVWIGLYQA 203
Query: 207 LSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLP 266
LSNVA+EGLLTEGFFWIPSL GPTTIAARQ+G+GISWLFPFVDGHPP+GW DT AYLVLP
Sbjct: 204 LSNVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPIGWHDTIAYLVLP 263
Query: 267 VLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLS 326
VLLV SQ++S++I++ Q+ DP+ K++Q + FLP MIGYF+LSVPSGLS+YWFTNN+LS
Sbjct: 264 VLLVASQFVSMEIMKPPQSTDPSQKNTQLILKFLPFMIGYFSLSVPSGLSIYWFTNNVLS 323
Query: 327 TAQQVWLQKFGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGE 386
TAQQVWL+K GGAK P+ +N+ G+ + A +A++ + + + GE
Sbjct: 324 TAQQVWLRKLGGAK-PI-------------VNEGGSGIIT----AGRAKRSSAQSGQGGE 365
Query: 387 KFKQIREQEARRRQQR 402
+FKQ++E+E+RR+ +
Sbjct: 366 RFKQLKEEESRRKATK 381
>gi|302801394|ref|XP_002982453.1| hypothetical protein SELMODRAFT_12955 [Selaginella moellendorffii]
gi|300149552|gb|EFJ16206.1| hypothetical protein SELMODRAFT_12955 [Selaginella moellendorffii]
Length = 306
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/285 (73%), Positives = 243/285 (85%), Gaps = 9/285 (3%)
Query: 63 LGVAERLLFTLADAAVSSSDAVTTT-------KQNSDWLSGITNVMETVLKVLKDGMSTL 115
L E L+T+ADAAV++ D VT + Q SDW SG+T VME VLKVLKDG++TL
Sbjct: 1 LARVEGFLYTVADAAVAT-DVVTDSTSETVQQAQQSDWFSGVTTVMEAVLKVLKDGLTTL 59
Query: 116 HVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLET 175
VPYAYGFAIILLTV+VK TFPLTK Q ES+++M++L P++KAIQ+RYAGDQERIQ+ET
Sbjct: 60 KVPYAYGFAIILLTVLVKVLTFPLTKSQAESTISMQNLQPKLKAIQQRYAGDQERIQMET 119
Query: 176 ARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAAR 235
ARLYK AG+NPLAGCLPTLAT+PVWIGLYRALSNVA+EGLL+EGFFWIPSLAGPTTIAAR
Sbjct: 120 ARLYKQAGVNPLAGCLPTLATLPVWIGLYRALSNVANEGLLSEGFFWIPSLAGPTTIAAR 179
Query: 236 QNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
Q+GSGISWLFPFVDGHPPLGW DT AYLVLPVLL+ SQY S++I+Q Q DP+ K++Q
Sbjct: 180 QSGSGISWLFPFVDGHPPLGWGDTIAYLVLPVLLIGSQYASMQIMQPPQ-TDPSQKNTQL 238
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+ FLPLMIGYFALSVPSGLSLYW TNN+LST QQVWL+K GGAK
Sbjct: 239 ILKFLPLMIGYFALSVPSGLSLYWLTNNILSTGQQVWLRKLGGAK 283
>gi|224054791|ref|XP_002298365.1| inner membrane protein [Populus trichocarpa]
gi|222845623|gb|EEE83170.1| inner membrane protein [Populus trichocarpa]
Length = 451
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/372 (58%), Positives = 283/372 (76%), Gaps = 28/372 (7%)
Query: 62 LLGVAERLLFTLADAA--------VSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMS 113
++ AE L+TLADAA +SSD ++N W I++ ME VLKVLKDG+S
Sbjct: 59 IISRAEGFLYTLADAAVAVDSAASTTSSDTADAAQKNGGWFGFISDGMEFVLKVLKDGLS 118
Query: 114 TLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQL 173
++HVPYAYGFAIILLT+ VK AT PLTKKQVES++AM++L P++KAIQ+RYAG+QERIQL
Sbjct: 119 SVHVPYAYGFAIILLTIAVKVATLPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQL 178
Query: 174 ETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIA 233
ET+RLY+ AG+NPLAGC PTLATIPVWIGLY+ALSNVA+EG+LTEGFFWIPSL GPTTIA
Sbjct: 179 ETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGVLTEGFFWIPSLGGPTTIA 238
Query: 234 ARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSS 293
ARQ+GSGISWLFPFVDGHPPLGW DT AYLVLPVLL+ SQY+S++I++ Q +DP K++
Sbjct: 239 ARQSGSGISWLFPFVDGHPPLGWHDTAAYLVLPVLLIASQYVSMEIMKPPQTDDPTQKNT 298
Query: 294 QALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDE 353
+ FLP+MIGYF+LSVPSGLS+YWFTNN+LSTAQQVWL+K GGAK P+
Sbjct: 299 LLVFKFLPIMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAK-PV---------- 347
Query: 354 RLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARR--RQQREEEKRKAAE 411
+N++ G+ + + R A ++ +PG++FKQ++EQ+ + R+ E +A +
Sbjct: 348 ---VNENASGIITAGRAKRSA----SQPGQPGDRFKQLKEQDKSKTLRKALPTEGVQALD 400
Query: 412 AAAKGNQTINGE 423
+A+ ++ + E
Sbjct: 401 SASGSDEDSDEE 412
>gi|326510231|dbj|BAJ87332.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514202|dbj|BAJ92251.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520860|dbj|BAJ92793.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 449
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/313 (64%), Positives = 255/313 (81%), Gaps = 18/313 (5%)
Query: 87 TKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVES 146
+++ W I++ ME VLK+LKDG+S +HVPYAYGFAIILLT++VKAAT PLTK+QVES
Sbjct: 93 VQKSGGWFGFISDAMEVVLKILKDGLSAVHVPYAYGFAIILLTIVVKAATLPLTKQQVES 152
Query: 147 SMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRA 206
+MAM++L PQ+KAIQ RYAG+QERIQLETARLYK AG+NPLAGCLPTLATIPVWIGLY+A
Sbjct: 153 TMAMQNLQPQLKAIQARYAGNQERIQLETARLYKQAGVNPLAGCLPTLATIPVWIGLYQA 212
Query: 207 LSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLP 266
LSNVA+EGLLTEGFFWIPSL GPTTIAARQ+G+GISWLFPFVDGHPP+GW DT YLVLP
Sbjct: 213 LSNVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPIGWHDTICYLVLP 272
Query: 267 VLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLS 326
VLLV SQ++S++I++ Q+ DP+ K++Q + FLP MIGYF+LSVPSGLS+YWFTNN+LS
Sbjct: 273 VLLVASQFVSMEIMKPPQSTDPSQKNTQLILKFLPFMIGYFSLSVPSGLSIYWFTNNVLS 332
Query: 327 TAQQVWLQKFGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGE 386
TAQQ+WL+K GGAK +N+ G+ + A +A++ ++ + GE
Sbjct: 333 TAQQIWLRKLGGAKP--------------AVNEGASGIIT----AGRAKRSGSQSGQGGE 374
Query: 387 KFKQIREQEARRR 399
+FKQ++E+E RR+
Sbjct: 375 RFKQLKEEENRRK 387
>gi|194702082|gb|ACF85125.1| unknown [Zea mays]
gi|414876324|tpg|DAA53455.1| TPA: inner membrane protein ALBINO3 [Zea mays]
Length = 455
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 204/314 (64%), Positives = 250/314 (79%), Gaps = 22/314 (7%)
Query: 87 TKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVES 146
++NS W I+ +E VLKVLKDG+S +HVPY+YGFAIILLT+IVKAAT PLTKKQVES
Sbjct: 100 VQKNSGWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTIIVKAATLPLTKKQVES 159
Query: 147 SMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRA 206
++AM++L PQ+KAIQ+RYAG+QERIQLETARLYK AG+NPLAGC PTLATIPVWIGLY+A
Sbjct: 160 TLAMQNLQPQIKAIQQRYAGNQERIQLETARLYKQAGVNPLAGCFPTLATIPVWIGLYQA 219
Query: 207 LSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLP 266
LSNVA+EGLLTEGFFWIPSL GPTTIAARQ+GSGI+WLFPFVDGHPPLGW DT YLVLP
Sbjct: 220 LSNVANEGLLTEGFFWIPSLGGPTTIAARQSGSGITWLFPFVDGHPPLGWHDTICYLVLP 279
Query: 267 VLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLS 326
VLLV SQY+S++I++ Q++DP+ K++ + FLP MIG+F+LSVPSGLS+YWFTNN+LS
Sbjct: 280 VLLVASQYVSMEIMKPPQSDDPSQKNTMLILKFLPFMIGWFSLSVPSGLSIYWFTNNVLS 339
Query: 327 TAQQVWLQKFGGAKDPMKQ-FSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPG 385
TAQQVWL+K GGAK + + S II R + + P G
Sbjct: 340 TAQQVWLRKMGGAKPVVTEGGSGIITAGRAKRSNAQPA---------------------G 378
Query: 386 EKFKQIREQEARRR 399
E+F+Q++E+E RR+
Sbjct: 379 ERFRQLKEEENRRK 392
>gi|125569047|gb|EAZ10562.1| hypothetical protein OsJ_00395 [Oryza sativa Japonica Group]
Length = 952
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/337 (61%), Positives = 263/337 (78%), Gaps = 27/337 (8%)
Query: 85 TTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQV 144
+ ++N W I+ +E VLKVLKDG+S +HVPY+YGFAIILLTVIVKAAT PLTK+QV
Sbjct: 568 SVAQKNGGWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTVIVKAATLPLTKQQV 627
Query: 145 ESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLY 204
ES++AM++L PQ+KAIQ+RYAG+QERIQLETARLYK AG+NPLAGC PTLATIPVWIGLY
Sbjct: 628 ESTLAMQNLQPQIKAIQQRYAGNQERIQLETARLYKQAGVNPLAGCFPTLATIPVWIGLY 687
Query: 205 RALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLV 264
+ALSNVA+EGLLTEGFFWIPSL GPTTIAARQ+G+GISWL PFVDGHPPLGW DT YLV
Sbjct: 688 QALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLLPFVDGHPPLGWHDTICYLV 747
Query: 265 LPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNL 324
LPVLLV SQ++S++I++ Q +DP+ K++ + FLP MIG+F+LSVPSGLS+YWFTNN+
Sbjct: 748 LPVLLVASQFVSMEIMKPPQTDDPSQKNTLLVLKFLPFMIGWFSLSVPSGLSIYWFTNNI 807
Query: 325 LSTAQQVWLQKFGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRP 384
LSTAQQVWL+K GGAK P+ +N+ G+ + A +A++ + + +P
Sbjct: 808 LSTAQQVWLRKLGGAK-PV-------------VNQGGSGIIT----AGRAKRTSAQPAQP 849
Query: 385 GEKFKQIREQEARRRQQREEEKRKAAEAAAKGNQTIN 421
GE+FKQ++E EE KRK +A A G+ ++
Sbjct: 850 GERFKQLKE---------EESKRKGNKALAAGDSDLS 877
>gi|226530665|ref|NP_001150593.1| inner membrane protein ALBINO3 [Zea mays]
gi|195640414|gb|ACG39675.1| inner membrane protein ALBINO3 [Zea mays]
Length = 449
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/312 (65%), Positives = 249/312 (79%), Gaps = 22/312 (7%)
Query: 89 QNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSM 148
+NS W I+ +E VLKVLKDG+S +HVPY+YGFAIILLT+IVKAAT PLTKKQVES++
Sbjct: 98 KNSGWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTIIVKAATLPLTKKQVESTL 157
Query: 149 AMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALS 208
AM++L PQ+KAIQ+RYAG+QERIQLETARLYK AG+NPLAGC PTLATIPVWIGLY+ALS
Sbjct: 158 AMQNLQPQIKAIQQRYAGNQERIQLETARLYKQAGVNPLAGCFPTLATIPVWIGLYQALS 217
Query: 209 NVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVL 268
NVA+EGLLTEGFFWIPSL GPTTIAARQ+GSGI+WLFPFVDGHPPLGW DT YLVLPVL
Sbjct: 218 NVANEGLLTEGFFWIPSLGGPTTIAARQSGSGITWLFPFVDGHPPLGWHDTICYLVLPVL 277
Query: 269 LVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTA 328
LV SQY+S++I++ Q++DP+ K++ + FLP MIG+F+LSVPSGLS+YWFTNN+LSTA
Sbjct: 278 LVASQYVSMEIMKPPQSDDPSQKNTMLILKFLPFMIGWFSLSVPSGLSIYWFTNNVLSTA 337
Query: 329 QQVWLQKFGGAKDPMKQ-FSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEK 387
QQVWL+K GGAK + + S II R + + P GE+
Sbjct: 338 QQVWLRKMGGAKPVVTEGGSGIITAGRAKRSNAQPA---------------------GER 376
Query: 388 FKQIREQEARRR 399
F+Q++E+E RR+
Sbjct: 377 FRQLKEEENRRK 388
>gi|115434560|ref|NP_001042038.1| Os01g0151200 [Oryza sativa Japonica Group]
gi|54290223|dbj|BAD61111.1| putative PPF-1 protein [Oryza sativa Japonica Group]
gi|113531569|dbj|BAF03952.1| Os01g0151200 [Oryza sativa Japonica Group]
Length = 459
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/338 (61%), Positives = 259/338 (76%), Gaps = 29/338 (8%)
Query: 85 TTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQV 144
+ ++N W I+ +E VLKVLKDG+S +HVPY+YGFAIILLTVIVKAAT PLTK+QV
Sbjct: 101 SVAQKNGGWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTVIVKAATLPLTKQQV 160
Query: 145 ESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLY 204
ES++AM++L PQ+KAIQ+RYAG+QERIQLETARLYK AG+NPLAGC PTLATIPVWIGLY
Sbjct: 161 ESTLAMQNLQPQIKAIQQRYAGNQERIQLETARLYKQAGVNPLAGCFPTLATIPVWIGLY 220
Query: 205 RALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLV 264
+ALSNVA+EGLLTEGFFWIPSL GPTTIAARQ+G+GISWL PFVDGHPPLGW DT YLV
Sbjct: 221 QALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLLPFVDGHPPLGWHDTICYLV 280
Query: 265 LPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNL 324
LPVLLV SQ++S++I++ Q +DP+ K++ + FLP MIG+F+LSVPSGLS+YWFTNN+
Sbjct: 281 LPVLLVASQFVSMEIMKPPQTDDPSQKNTLLVLKFLPFMIGWFSLSVPSGLSIYWFTNNI 340
Query: 325 LSTAQQVWLQKFGGAKDPMKQ-FSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPR 383
LSTAQQVWL+K GGAK + Q S II R A++ + + +
Sbjct: 341 LSTAQQVWLRKLGGAKPVVNQGGSGIITAGR-------------------AKRTSAQPAQ 381
Query: 384 PGEKFKQIREQEARRRQQREEEKRKAAEAAAKGNQTIN 421
PGE+FKQ++E EE KRK +A A G+ ++
Sbjct: 382 PGERFKQLKE---------EESKRKGNKALAAGDSDLS 410
>gi|218187535|gb|EEC69962.1| hypothetical protein OsI_00422 [Oryza sativa Indica Group]
Length = 459
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 202/312 (64%), Positives = 256/312 (82%), Gaps = 18/312 (5%)
Query: 88 KQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESS 147
++N W I+ +E VLKVLKDG+S +HVPY+YGFAIILLTVIVKAAT PLTK+QVES+
Sbjct: 104 QKNGGWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTVIVKAATLPLTKQQVEST 163
Query: 148 MAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRAL 207
+AM++L PQ+KAIQ+RYAG+QERIQLETARLYK AG+NPLAGC PTLATIPVWIGLY+AL
Sbjct: 164 LAMQNLQPQIKAIQQRYAGNQERIQLETARLYKQAGVNPLAGCFPTLATIPVWIGLYQAL 223
Query: 208 SNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPV 267
SNVA+EGLLTEGFFWIPSL GPTTIAARQ+G+GISWL PFVDGHPPLGW DT YLVLPV
Sbjct: 224 SNVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLLPFVDGHPPLGWHDTICYLVLPV 283
Query: 268 LLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLST 327
LLV SQ++S++I++ Q +DP+ K++ + FLP MIG+F+LSVPSGLS+YWFTNN+LST
Sbjct: 284 LLVASQFVSMEIMKPPQTDDPSQKNTLLVLKFLPFMIGWFSLSVPSGLSIYWFTNNILST 343
Query: 328 AQQVWLQKFGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEK 387
AQQVWL+K GGAK P+ +N+ G+ + A +A++ + + +PGE+
Sbjct: 344 AQQVWLRKLGGAK-PV-------------VNQGGSGIIT----AGRAKRTSAQPAQPGER 385
Query: 388 FKQIREQEARRR 399
FKQ++E+E++R+
Sbjct: 386 FKQLKEEESKRK 397
>gi|226495803|ref|NP_001152272.1| LOC100285911 [Zea mays]
gi|195654525|gb|ACG46730.1| inner membrane protein ALBINO3 [Zea mays]
gi|223974117|gb|ACN31246.1| unknown [Zea mays]
gi|413947415|gb|AFW80064.1| inner membrane protein ALBINO3 [Zea mays]
Length = 459
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/312 (64%), Positives = 247/312 (79%), Gaps = 22/312 (7%)
Query: 89 QNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSM 148
+N W I+ +E VLKVLKDG+S +HVPY+YGFAIILLT+IVKAAT PLTKKQVES+M
Sbjct: 104 KNGGWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTIIVKAATLPLTKKQVESTM 163
Query: 149 AMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALS 208
AM++L PQ+KAIQ+RYAG+QERIQLETARLY+ AG+NPLAGC PTLATIPVWIGLY+ALS
Sbjct: 164 AMQNLQPQLKAIQQRYAGNQERIQLETARLYRQAGVNPLAGCFPTLATIPVWIGLYQALS 223
Query: 209 NVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVL 268
NVA+EGLLTEGFFWIPSL GPTTIAARQ+G+GISWLFPFVDGHPPLGW DT YLVLPVL
Sbjct: 224 NVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPLGWYDTICYLVLPVL 283
Query: 269 LVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTA 328
LV SQY+S++I++ Q++DP+ K++ + FLP MIGYF+LSVPSGLS+YWFTNN+LSTA
Sbjct: 284 LVASQYVSMEIMKPPQSDDPSQKNTLLVLKFLPFMIGYFSLSVPSGLSIYWFTNNVLSTA 343
Query: 329 QQVWLQKFGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRP-GEK 387
QQVWL+K GGAK P +S + A + +P GE+
Sbjct: 344 QQVWLRKMGGAK---------------------PVVSEGDRRIITAGRAKRSNAQPAGER 382
Query: 388 FKQIREQEARRR 399
F+Q++E+E+ R+
Sbjct: 383 FRQLKEEESMRK 394
>gi|38372402|sp|Q9FY06.2|PPF1_PEA RecName: Full=Inner membrane protein PPF-1, chloroplastic; AltName:
Full=Post-floral-specific protein 1; Flags: Precursor
gi|2231046|emb|CAA73179.1| PPF-1 protein [Pisum sativum]
Length = 442
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/423 (55%), Positives = 304/423 (71%), Gaps = 45/423 (10%)
Query: 17 PNRTDIQTPLFTRTHFGLKPFLRGSICVAKFGLRPDPNSADGVKELLGV---AERLLFTL 73
PNRT LFT+ F F P S +L G+ AE LL+TL
Sbjct: 25 PNRTR----LFTKVQF-------------SFHQLPPIQSVSHSVDLSGIFARAEGLLYTL 67
Query: 74 ADAAVSSSDAVTTT---KQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTV 130
ADA V++ A +T ++N W I++ ME VLKVLKDG+S++HVPY+YGFAIILLTV
Sbjct: 68 ADATVAADAAASTDVAAQKNGGWFGFISDGMEFVLKVLKDGLSSVHVPYSYGFAIILLTV 127
Query: 131 IVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGC 190
IVKAAT PLTK+QVES++AM++L P++KAIQERYAG+QERIQLET+RLY AG+NPLAGC
Sbjct: 128 IVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYTQAGVNPLAGC 187
Query: 191 LPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDG 250
LPTLATIPVWIGLY+ALSNVA+EGLLTEGF WIPSL GPT+IAARQ+GSGISWLFPFVDG
Sbjct: 188 LPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAARQSGSGISWLFPFVDG 247
Query: 251 HPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALS 310
HP LGW DT AYLVLPVLL+VSQY+S++I++ Q NDPN K++ + FLPLMIGYF+LS
Sbjct: 248 HPLLGWYDTAAYLVLPVLLIVSQYVSMEIMKPPQTNDPNQKNTLLIFKFLPLMIGYFSLS 307
Query: 311 VPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKKE 370
VPSGL++YWFTNN+LSTAQQVWL+K GGAK +N++ G+ +
Sbjct: 308 VPSGLTIYWFTNNVLSTAQQVWLRKLGGAKP--------------AVNENAGGIIT---- 349
Query: 371 ARQAEKLTTEGPRPGEKFKQIREQEARRRQQR----EEEKRKAAEAAAKGNQTINGEQER 426
A QA++ ++ + GE+F+Q++E+E +++ + EE + A+ +A+ + +E+
Sbjct: 350 AGQAKRSASKPEKGGERFRQLKEEEKKKKLIKALPVEEVQPLASASASNDGSDVENNKEQ 409
Query: 427 EAS 429
E +
Sbjct: 410 EVT 412
>gi|225434998|ref|XP_002284077.1| PREDICTED: inner membrane protein PPF-1, chloroplastic isoform 1
[Vitis vinifera]
Length = 455
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/335 (63%), Positives = 262/335 (78%), Gaps = 27/335 (8%)
Query: 66 AERLLFTLADAAV---------SSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLH 116
AE LL+TLADAAV +S A ++N W I+ ME VLKVL+DG++ +H
Sbjct: 66 AESLLYTLADAAVSADPAAAGPASGTADAAVQKNGGWFGFISEGMEVVLKVLEDGLTAVH 125
Query: 117 VPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETA 176
VPYAYGFAIILLTVIVK AT+PLTKKQVES++AM++L P++KAIQERY G+QERIQLET+
Sbjct: 126 VPYAYGFAIILLTVIVKIATYPLTKKQVESTLAMQNLQPKIKAIQERYKGNQERIQLETS 185
Query: 177 RLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ 236
RLYK AG+NPLAGC PTLATIPVWIGLY+ALSNVA+EGLLTEGFFWIPSL GPTTIAARQ
Sbjct: 186 RLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQ 245
Query: 237 NGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
+GSGISWL PFVDGHPPLGW DT AYLVLPVLLV+SQY+S+++++ Q +DP+ K++ +
Sbjct: 246 SGSGISWLIPFVDGHPPLGWQDTAAYLVLPVLLVISQYVSMELMKPPQTDDPSQKNTLLV 305
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDERLD 356
FLPLMIGYF+LSVPSGLS+YWFTNN+LSTAQQVWL+K GGAK P+
Sbjct: 306 FKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAK-PV------------- 351
Query: 357 INKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQI 391
+N+ G+ + + R A ++ R G++F+Q+
Sbjct: 352 VNEDASGIITAGRAKRSA----SQPARAGDRFRQL 382
>gi|356539022|ref|XP_003537999.1| PREDICTED: inner membrane protein PPF-1, chloroplastic-like
[Glycine max]
Length = 450
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/414 (54%), Positives = 295/414 (71%), Gaps = 44/414 (10%)
Query: 1 MATSLSIHQNLILSPFPNRTDIQTPLFTRTHFGLKPFLRGSICVAKFGLRPDPNSADGVK 60
MA +L Q+ I +P P+ R H + L + + P +S
Sbjct: 1 MAKTLISSQSFIGTPLPS--------LPRHHLPHRTRLVATKVLVSLHEIPPIHSISRNI 52
Query: 61 ELLGV---AERLLFTLADAAVS------------SSDAVTTTKQNSDWLSGITNVMETVL 105
+ G+ AE LL+TLADAAV+ ++DA +++ W I+ ME VL
Sbjct: 53 DFAGIVTRAEGLLYTLADAAVAADPAVAADSAASTTDA--AVQKSGGWFGFISEAMEFVL 110
Query: 106 KVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYA 165
KVLKDG+S +HVPYAYGFAIILLTVIVKAAT PLTK+QVES++AM++L P++KAIQ+RYA
Sbjct: 111 KVLKDGLSAVHVPYAYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQDRYA 170
Query: 166 GDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPS 225
G+QERIQLET+RLY+ AG+NPLAGCLPTLATIPVWIGLY+ALSNVA+EGLLTEGF WIPS
Sbjct: 171 GNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPS 230
Query: 226 LAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQN 285
L GPTTIAARQ+G+GISWLFPFVDGHPPLGW DT AYLVLP+LLVVSQY+S++I++ Q
Sbjct: 231 LGGPTTIAARQSGAGISWLFPFVDGHPPLGWQDTAAYLVLPILLVVSQYVSMEIMKPPQ- 289
Query: 286 NDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQ 345
DP+ K+ + FLPLMIGYF+LSVPSGL++YWF NN+LSTAQQVWL+K GGAK P+
Sbjct: 290 TDPSQKNQLLILKFLPLMIGYFSLSVPSGLTIYWFINNVLSTAQQVWLRKLGGAK-PV-- 346
Query: 346 FSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRR 399
+N++ G+ + A +A++ + R GE+FKQ++E++ +++
Sbjct: 347 -----------VNENAGGIIT----AGRAKRSDLQPVRNGERFKQLKEEDKKKK 385
>gi|168046980|ref|XP_001775950.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672782|gb|EDQ59315.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 313
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/296 (70%), Positives = 248/296 (83%), Gaps = 8/296 (2%)
Query: 62 LLGVAERLLFTLADAAVSS-----SDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLH 116
LL E L FTLADAAV++ +DAV KQ+ WL GITN +E L LKDG++ +
Sbjct: 1 LLTRTEGLFFTLADAAVATDPGQVTDAVVQ-KQDGGWLGGITNTLELALTFLKDGIAKIG 59
Query: 117 VPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETA 176
+PY+YGFAIILLTVIVKAAT+PLTKKQVES++AM++L P++KAIQ RY GDQERIQLETA
Sbjct: 60 LPYSYGFAIILLTVIVKAATYPLTKKQVESTLAMQNLQPKIKAIQTRYQGDQERIQLETA 119
Query: 177 RLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ 236
RLYK AG+NPLAGCLPTLAT+PVWIGLYRALSNVA+EGLLTEGFFWIPSLAGPTTIAAR
Sbjct: 120 RLYKQAGVNPLAGCLPTLATLPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAARS 179
Query: 237 NGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQ-SSQNNDPNMKSSQA 295
+GSGISWLFPFVDG PPLGW DT AYLVLPVLL+ SQY+S++I+Q ++ +NDP SQ
Sbjct: 180 SGSGISWLFPFVDGAPPLGWGDTIAYLVLPVLLIGSQYVSMQIMQPATASNDPAQNQSQL 239
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPM-KQFSDII 350
+ FLPLMIGYF+LSVPSGLSLYW TNN+LSTAQQV+L++ GGA+ + K+ S II
Sbjct: 240 ILKFLPLMIGYFSLSVPSGLSLYWLTNNVLSTAQQVYLRQLGGAQPIVDKEGSGII 295
>gi|302798427|ref|XP_002980973.1| hypothetical protein SELMODRAFT_12954 [Selaginella moellendorffii]
gi|300151027|gb|EFJ17674.1| hypothetical protein SELMODRAFT_12954 [Selaginella moellendorffii]
Length = 313
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/291 (70%), Positives = 241/291 (82%), Gaps = 14/291 (4%)
Query: 63 LGVAERLLFTLADAAVSS---SDAVTTT---KQNSDWLSGITNVMETVLKVLKDGMSTLH 116
L E L+T+ADAAV++ +D + T Q SDW SG+T VME VLKVLKDG++TL
Sbjct: 1 LARVEGFLYTVADAAVATDVVTDGTSETVQQAQQSDWFSGVTTVMEAVLKVLKDGLTTLK 60
Query: 117 VPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETA 176
VPYAYGFAIILLTV+VK TFPLTK Q ES+++M++L P++KAIQ+RYAGDQERIQ+ETA
Sbjct: 61 VPYAYGFAIILLTVLVKVLTFPLTKSQAESTISMQNLQPKLKAIQQRYAGDQERIQMETA 120
Query: 177 RLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ 236
RLYK AG+NPLAGCLPTLAT+PVWIGLYRALSNVA+EGLL+EGFFWIPSLAGPTTIAARQ
Sbjct: 121 RLYKQAGVNPLAGCLPTLATLPVWIGLYRALSNVANEGLLSEGFFWIPSLAGPTTIAARQ 180
Query: 237 NGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
+GSGISWLFPFVDGHPPLGW DT AYLVLPVLL+ SQY S++I+Q Q DP+ K++Q +
Sbjct: 181 SGSGISWLFPFVDGHPPLGWGDTIAYLVLPVLLIGSQYASMQIMQPPQ-TDPSQKNTQLI 239
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTN-------NLLSTAQQVWLQKFGGAK 340
FLPLMIGYFALSVPSGLSLYW + ++LST QQVWL+K GG K
Sbjct: 240 LKFLPLMIGYFALSVPSGLSLYWLSTENRVANKHILSTGQQVWLRKLGGRK 290
>gi|297746102|emb|CBI16158.3| unnamed protein product [Vitis vinifera]
Length = 451
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/313 (64%), Positives = 250/313 (79%), Gaps = 18/313 (5%)
Query: 79 SSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFP 138
+S A ++N W I+ ME VLKVL+DG++ +HVPYAYGFAIILLTVIVK AT+P
Sbjct: 84 ASGTADAAVQKNGGWFGFISEGMEVVLKVLEDGLTAVHVPYAYGFAIILLTVIVKIATYP 143
Query: 139 LTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIP 198
LTKKQVES++AM++L P++KAIQERY G+QERIQLET+RLYK AG+NPLAGC PTLATIP
Sbjct: 144 LTKKQVESTLAMQNLQPKIKAIQERYKGNQERIQLETSRLYKQAGVNPLAGCFPTLATIP 203
Query: 199 VWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSD 258
VWIGLY+ALSNVA+EGLLTEGFFWIPSL GPTTIAARQ+GSGISWL PFVDGHPPLGW D
Sbjct: 204 VWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLIPFVDGHPPLGWQD 263
Query: 259 TFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLY 318
T AYLVLPVLLV+SQY+S+++++ Q +DP+ K++ + FLPLMIGYF+LSVPSGLS+Y
Sbjct: 264 TAAYLVLPVLLVISQYVSMELMKPPQTDDPSQKNTLLVFKFLPLMIGYFSLSVPSGLSIY 323
Query: 319 WFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKKEARQAEKLT 378
WFTNN+LSTAQQVWL+K GGAK P+ +N+ G+ + + R A
Sbjct: 324 WFTNNVLSTAQQVWLRKLGGAK-PV-------------VNEDASGIITAGRAKRSA---- 365
Query: 379 TEGPRPGEKFKQI 391
++ R G++F+Q+
Sbjct: 366 SQPARAGDRFRQL 378
>gi|9886727|emb|CAC04249.1| PPF-1 protein [Pisum sativum]
Length = 442
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/423 (54%), Positives = 301/423 (71%), Gaps = 45/423 (10%)
Query: 17 PNRTDIQTPLFTRTHFGLKPFLRGSICVAKFGLRPDPNSADGVKELLGV---AERLLFTL 73
PNRT LFT+ F F P S +L G+ AE LL+TL
Sbjct: 25 PNRTR----LFTKVQF-------------SFHQLPPIQSVSHSVDLSGIFARAEGLLYTL 67
Query: 74 ADAAVSSSDAVTTT---KQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTV 130
ADA V++ A +T ++N W I++ ME VLKVLK G+S++HVPY+YGFAIILLT
Sbjct: 68 ADATVAADAAASTDVAAQKNGGWFGFISDGMEFVLKVLKGGLSSVHVPYSYGFAIILLTG 127
Query: 131 IVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGC 190
IVKAAT PLTK+QVES++AM++ P++KAIQERYAG+QERIQLET+RLY AG+NPLAGC
Sbjct: 128 IVKAATLPLTKQQVESTLAMQNPQPKIKAIQERYAGNQERIQLETSRLYTQAGVNPLAGC 187
Query: 191 LPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDG 250
LPTLATIPVWIGLY+ALSNVA+EGLLTEGF WIPSL GPT+IAARQ+GSGISWLFPFVDG
Sbjct: 188 LPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAARQSGSGISWLFPFVDG 247
Query: 251 HPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALS 310
HPPLGW DT AYLVLPVLL+VSQY+S++I++ Q NDPN K++ + FLPLMIGYF+LS
Sbjct: 248 HPPLGWYDTAAYLVLPVLLIVSQYVSMEIMKPPQTNDPNQKNTLLIFKFLPLMIGYFSLS 307
Query: 311 VPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKKE 370
VPSGL++YWFTNN+LSTA +VWL+K GGAK +N++ G+ +
Sbjct: 308 VPSGLTIYWFTNNVLSTAHKVWLRKLGGAKP--------------AVNENAGGIIT---- 349
Query: 371 ARQAEKLTTEGPRPGEKFKQIREQEARRRQQR----EEEKRKAAEAAAKGNQTINGEQER 426
A QA++ ++ + GE+F+Q++E+E +++ + EE + A+ +A+ + +E+
Sbjct: 350 AGQAKRSASKPEKGGERFRQLKEEEKKKKLIKALPVEEVQPLASASASNDGSDVENNKEQ 409
Query: 427 EAS 429
E +
Sbjct: 410 EVT 412
>gi|356542455|ref|XP_003539682.1| PREDICTED: inner membrane protein PPF-1, chloroplastic-like
[Glycine max]
Length = 450
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/406 (55%), Positives = 289/406 (71%), Gaps = 44/406 (10%)
Query: 1 MATSLSIHQNLILSPFPNRTDIQTPLFTRTHFGLKPFLRGSICVAKFGLRPDPNSADGVK 60
MA +L + I +P P+ P TR F+ + V+ + P + + +
Sbjct: 1 MAKTLISSPSFIGTPLPSLPRHHLPHRTR-------FVTTKVHVSLHEIPPIQSLSHSI- 52
Query: 61 ELLGV---AERLLFTLADAAV------------SSSDAVTTTKQNSDWLSGITNVMETVL 105
+ G+ AE LL+TLADAAV S++DA +++ W I+ ME VL
Sbjct: 53 DFAGIVTRAEGLLYTLADAAVAADPAVAADTAASTTDA--AVQKSGGWFGFISEAMEFVL 110
Query: 106 KVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYA 165
KVLKDG+S +HVPYAYGFAIILLTVIVKAAT PLTK+QVES++AM++L P++KAIQ+RYA
Sbjct: 111 KVLKDGLSAVHVPYAYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQDRYA 170
Query: 166 GDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPS 225
G+QERIQLET+RLY+ AG+NPLAGCLPTLATIPVWIGLY+ALSNVA+EGLLTEGF WIPS
Sbjct: 171 GNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPS 230
Query: 226 LAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQN 285
L GPTTIAARQ+G+GISWLFPFVDGHPPLGW DT AYLVLP+LLVVSQY+S++I++ Q
Sbjct: 231 LGGPTTIAARQSGAGISWLFPFVDGHPPLGWQDTAAYLVLPILLVVSQYVSMEIMKPPQ- 289
Query: 286 NDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQ 345
DP+ K+ + FLPLMIGYF+LSVPSGL++YWF NN+LSTAQQVWL+K GGAK P+
Sbjct: 290 TDPSQKNQLLILKFLPLMIGYFSLSVPSGLTIYWFINNVLSTAQQVWLRKLGGAK-PV-- 346
Query: 346 FSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQI 391
+N++ G+ + + R +L R GE+FKQ+
Sbjct: 347 -----------VNENAGGIITAGRAKRSDSQLA----RNGERFKQL 377
>gi|156530446|gb|ABU75304.1| chloroplast PPF-1 [Citrus trifoliata]
Length = 452
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/343 (62%), Positives = 269/343 (78%), Gaps = 30/343 (8%)
Query: 67 ERLLFTLADAAVS---------SSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHV 117
E LL+TLADAAVS S+ A T++N W I+ ME VLK+LKDG+ +HV
Sbjct: 68 ESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHV 127
Query: 118 PYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETAR 177
PY+YGFAIILLTVIVK ATFPLTKKQVES++AM++L P++KAIQ+RYAG+QERIQLET+R
Sbjct: 128 PYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSR 187
Query: 178 LYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQN 237
LY+ AG+NPLAGCLPTLATIPVWIGLY+ALSNVA+EGLLTEGFFWIPSL+GPTTIAARQ+
Sbjct: 188 LYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQS 247
Query: 238 GSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALT 297
GSGISWL PFVDGHPPLGW DT AYLVLPVLLVVSQY +++I++ Q +DP K++ +
Sbjct: 248 GSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQY-AMEIMKPPQTDDPAQKNTLLVF 306
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQ-FSDIIKDERLD 356
FLPLMIGYF+LSVPSGLS+YWFTNN+LSTAQQVWL+K GGAK + + S+II
Sbjct: 307 KFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVVTENASEIIT----- 361
Query: 357 INKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRR 399
A +A++ ++ R G++F+Q++E+E ++
Sbjct: 362 --------------AGRAKRSVSQPSRAGDRFRQLKEEEKGKK 390
>gi|414873898|tpg|DAA52455.1| TPA: hypothetical protein ZEAMMB73_865472 [Zea mays]
Length = 458
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/428 (52%), Positives = 285/428 (66%), Gaps = 68/428 (15%)
Query: 61 ELLGVAERLLFTLADAAVSSSDAVTTTKQN---SDWLSGITNVMETVLKVLKDGMSTLHV 117
+LLG E LL+T+ADAAVS+ + DWLS ITN METVLKV
Sbjct: 52 DLLGRVEALLYTVADAAVSAEPVAAAGTKEAAAGDWLSSITNSMETVLKV---------- 101
Query: 118 PYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETAR 177
ES++AMRSL PQVK IQERYAGDQERIQLETAR
Sbjct: 102 ---------------------------ESALAMRSLQPQVKTIQERYAGDQERIQLETAR 134
Query: 178 LYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQN 237
LYKL+G++PLAGCLPTL TIPVWIGLYRALSNVA+EGLLTEGFFWIPSLAGPTTIAA+QN
Sbjct: 135 LYKLSGVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAAQQN 194
Query: 238 GSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALT 297
G GISWLFPF DGHPPLGWSDT AYLVLPVLLV+SQYIS +++Q Q+NDP+ + +QA+T
Sbjct: 195 GQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYISSQVMQPPQSNDPSQQGAQAVT 254
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSD-IIKDERLD 356
FLPL+IGYFALSVPSGL LYW TNN+LSTAQQVWLQK GGAK+P+K++ D + ++E +
Sbjct: 255 KFLPLLIGYFALSVPSGLGLYWLTNNILSTAQQVWLQKLGGAKNPVKEYIDKLSREESTN 314
Query: 357 INKS--------VPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRRQQREEEKRK 408
+ K+ +P LS +A+ +++L GP+ GE+F++++E+E+RR++ + ++
Sbjct: 315 VQKNGSTVQSKPLPKLS----KAQPSQELKPTGPQRGERFRKLKEEESRRKEVLGQAEQS 370
Query: 409 AAEAAAKGNQTINGEQEREASILGSAKGVQTDLVDKDDENFPSVTGDNASNIGVAINGNI 468
+ ++G Q +AS DK+DE P G +N +N
Sbjct: 371 EQSSFES--SVVDGAQISDASS-----------GDKNDEQEPHEIGPIVANSNGGVNH-- 415
Query: 469 SSHEFKEN 476
S +E EN
Sbjct: 416 SRNEKTEN 423
>gi|255581095|ref|XP_002531362.1| Inner membrane protein PPF-1, chloroplast precursor, putative
[Ricinus communis]
gi|223529022|gb|EEF31010.1| Inner membrane protein PPF-1, chloroplast precursor, putative
[Ricinus communis]
Length = 449
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 235/411 (57%), Positives = 293/411 (71%), Gaps = 39/411 (9%)
Query: 1 MATSLSIHQNLILSPFPN---RTDIQTPLFTRTHFGLKPFLRGSICVAKFGLRPDP---- 53
MA +L + I +P P+ R +Q L F S KF L P
Sbjct: 1 MAKTLISSPSFIGAPLPSSSSRHGLQHSLLPSRRFI-------STTKVKFSLHEIPPITH 53
Query: 54 -NSADGVKELLGVAERLLFTLADAAVSSSDAV---TTTKQNSDWLSGITNVMETVLKVLK 109
+S D ++ AE LL+TLADAAV+ + T ++N+ W I+ ME VLKVLK
Sbjct: 54 LDSVD-FNSIVSRAESLLYTLADAAVAVDSSAATDTAVQKNNGWFGFISEGMEFVLKVLK 112
Query: 110 DGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQE 169
DG+S++HVPY+YGFAIILLTVIVK AT PLTK+QVES++AM++L P++KAIQ+RYAG+QE
Sbjct: 113 DGLSSVHVPYSYGFAIILLTVIVKIATLPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQE 172
Query: 170 RIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGP 229
RIQLET+RLY+ AG+NPLAGC PTLATIPVWIGLY+ALSNVA+EGLLTEGFFWIPSL GP
Sbjct: 173 RIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGP 232
Query: 230 TTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPN 289
TTIAARQ+GSGISWLFPFVDGHPPLGW DT AYLVLPVLLVVSQY+S++I++ Q +DP
Sbjct: 233 TTIAARQSGSGISWLFPFVDGHPPLGWYDTAAYLVLPVLLVVSQYVSMEIMKPPQTDDPA 292
Query: 290 MKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQ-FSD 348
K++ + FLPLMIGYF+LSVPSGLS+YWF NN+LSTAQQVWL+K GGAK + Q S
Sbjct: 293 QKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFVNNVLSTAQQVWLRKLGGAKPVVDQNASG 352
Query: 349 IIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRR 399
II R K+ A Q + R G++F+Q++E+E R++
Sbjct: 353 IITAGR------------AKRSASQPQ-------RGGDRFRQLKEEEKRKK 384
>gi|242032277|ref|XP_002463533.1| hypothetical protein SORBIDRAFT_01g001520 [Sorghum bicolor]
gi|241917387|gb|EER90531.1| hypothetical protein SORBIDRAFT_01g001520 [Sorghum bicolor]
Length = 470
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/355 (61%), Positives = 266/355 (74%), Gaps = 52/355 (14%)
Query: 61 ELLGVAERLLFTLADAAVSSSDAVTT-----TKQNS-DWLSGITNVMETVLKVLKDGMST 114
+LLG E L+T+ADAAVS++D V T TK+ + DWLSGITN METVLK L
Sbjct: 57 DLLGRVEAFLYTVADAAVSAADPVVTAADGGTKEAAGDWLSGITNSMETVLKNLA----- 111
Query: 115 LHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLE 174
+VES++AMRSL PQVKAIQERYAGDQERIQLE
Sbjct: 112 ----------------------------KVESALAMRSLQPQVKAIQERYAGDQERIQLE 143
Query: 175 TARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAA 234
TARLYKL+G++PLAGCLPTL TIPVWIGLYRALSNVA+EGLLTEGFFWIPSLAGPTTIAA
Sbjct: 144 TARLYKLSGVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAA 203
Query: 235 RQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQ 294
RQNG GISWLFPF DGHPPLGWSDT AYLVLPVLLV+SQYIS +++Q Q+NDP+ + +Q
Sbjct: 204 RQNGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYISTQVMQPPQSNDPSQQGAQ 263
Query: 295 ALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDII-KDE 353
A+T FLPL+IGYFALSVPSGL LYW TNN+LSTAQQVWLQK GGAK+P+K++ D++ ++E
Sbjct: 264 AVTKFLPLLIGYFALSVPSGLGLYWLTNNILSTAQQVWLQKLGGAKNPVKEYIDVLSREE 323
Query: 354 RLDINKS--------VPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRRQ 400
+ K+ +P LS K + Q K + GP+ GE+F++++E+E+RR++
Sbjct: 324 STTVQKNESTVQIEPLPKLS--KPQPSQEPKPS--GPQRGERFRKLKEEESRRKE 374
>gi|110741684|dbj|BAE98788.1| hypothetical protein [Arabidopsis thaliana]
Length = 302
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/310 (70%), Positives = 255/310 (82%), Gaps = 19/310 (6%)
Query: 1 MATSLSIH-QNLILSPFPNRTDIQTPLFTRTHFGLKPFL---RGSICVAKFGLRPDPNSA 56
M++++S+ +LILS F +Q F R+ F P R VA+ G RPD S
Sbjct: 1 MSSTISLKPTHLILSSFSTGKVLQ---FRRSRFSHTPSSSSSRYRTLVAQLGFRPD--SF 55
Query: 57 DGVKELLGVAERLLFTLADAAVSSSD-----AVTTTK--QNSDWLSGITNVMETVLKVLK 109
D +K+ AE LL+T+ADAAVSSS+ A TTTK Q++DW SGI N MET+LKVLK
Sbjct: 56 DFIKDH---AENLLYTIADAAVSSSETFESVAGTTTKTTQSNDWFSGIANYMETILKVLK 112
Query: 110 DGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQE 169
DG+ST+HVPY+YGFAIILLTV+VKAATFPLTKKQVES+MAM+SL PQ+KAIQERYAGDQE
Sbjct: 113 DGLSTVHVPYSYGFAIILLTVLVKAATFPLTKKQVESAMAMKSLTPQIKAIQERYAGDQE 172
Query: 170 RIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGP 229
+IQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGP
Sbjct: 173 KIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGP 232
Query: 230 TTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPN 289
TT+AARQNGSGISWLFPF++GHPPLGW DT AYLVLP+LLV SQY+S++I+QSSQ+NDP
Sbjct: 233 TTVAARQNGSGISWLFPFIEGHPPLGWPDTLAYLVLPLLLVFSQYLSIQIMQSSQSNDPA 292
Query: 290 MKSSQALTNF 299
MKSSQA+T
Sbjct: 293 MKSSQAVTKL 302
>gi|168063889|ref|XP_001783900.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664583|gb|EDQ51297.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 321
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/316 (62%), Positives = 243/316 (76%), Gaps = 19/316 (6%)
Query: 88 KQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESS 147
KQ+ WL G++N +E L LKD ++ L +PY+YGFAIILLT++VKAAT+PLTKKQVES+
Sbjct: 5 KQDGGWLGGVSNSLEIALTFLKDTIAKLGIPYSYGFAIILLTILVKAATYPLTKKQVEST 64
Query: 148 MAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRAL 207
+AM++L P++KAIQ RY GDQERIQLETARLYK AG+NPLAGCLPTLAT+PVWIGLYRAL
Sbjct: 65 LAMQNLQPKIKAIQTRYQGDQERIQLETARLYKQAGVNPLAGCLPTLATLPVWIGLYRAL 124
Query: 208 SNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPV 267
SNVA+EGLLTEGFFWIPSLAGPTTIAAR +GSGISWLFPFVDG P LGW+DT AYLVLPV
Sbjct: 125 SNVANEGLLTEGFFWIPSLAGPTTIAARSSGSGISWLFPFVDGAPSLGWADTIAYLVLPV 184
Query: 268 LLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLST 327
LL+ SQY+S++I+Q NDP SQ + FLPLMIGYF+LSVPSGLSLYW TNN+LST
Sbjct: 185 LLIGSQYVSMQIMQPPTTNDPAQNQSQLILKFLPLMIGYFSLSVPSGLSLYWLTNNVLST 244
Query: 328 AQQVWLQKFGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEK 387
AQQV+L++ GGA+ P+ ++K G+ S + R T P
Sbjct: 245 AQQVYLRQLGGAQ-PI-------------VDKEGSGIISAGQAKR-----TPLPPSASTS 285
Query: 388 FKQIREQEARRRQQRE 403
Q++E++A+++ R
Sbjct: 286 ATQLKEEDAKKKGSRR 301
>gi|224104461|ref|XP_002313443.1| inner membrane protein [Populus trichocarpa]
gi|222849851|gb|EEE87398.1| inner membrane protein [Populus trichocarpa]
Length = 446
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/367 (58%), Positives = 282/367 (76%), Gaps = 24/367 (6%)
Query: 54 NSADGVKELLGVAERLLFTLADAAVSSSDAVTTT-----KQNSDWLSGITNVMETVLKVL 108
+S+ ++ AE L+TLADAAV+ A +TT +++ W I++ ME VLKVL
Sbjct: 51 DSSIDFNSIISRAEGFLYTLADAAVAVDSAASTTSTDTAQKSGGWFGFISDGMEFVLKVL 110
Query: 109 KDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQ 168
KDG+S +HVPYAYGFAIILLTV VK AT PLTKKQVES++AM++L P++KAIQ+RYAG+Q
Sbjct: 111 KDGLSAVHVPYAYGFAIILLTVFVKVATLPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQ 170
Query: 169 ERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG 228
ERIQLET+RLY+ AG+NPLAGC PTLATIPVWIGLY+ALSNVA+EG+LTEGFFWIPSL G
Sbjct: 171 ERIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGVLTEGFFWIPSLGG 230
Query: 229 PTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDP 288
PTTIAARQ+GSGISWLFPFVDGHPPLGW+DT AYLVLPVLLVVSQY+S++I++ Q +DP
Sbjct: 231 PTTIAARQSGSGISWLFPFVDGHPPLGWNDTAAYLVLPVLLVVSQYVSMEIMKPPQTDDP 290
Query: 289 NMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSD 348
K++ + FLPLMIGYF+LSVPSGLS+YWFTNN+LSTAQQVWL++ GGAK P+
Sbjct: 291 TQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRQLGGAK-PV----- 344
Query: 349 IIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRRQQR-EEEKR 407
+N++ G+ + + R A + +PG++F+ E++ ++ + + E
Sbjct: 345 --------VNENASGIITAGRAKRSA----AQPGQPGDRFRLKEEEKGKKLSKALQSEDV 392
Query: 408 KAAEAAA 414
+A ++A+
Sbjct: 393 QALDSAS 399
>gi|186503883|ref|NP_001118405.1| inner membrane protein ALBINO3 [Arabidopsis thaliana]
gi|330253080|gb|AEC08174.1| inner membrane protein ALBINO3 [Arabidopsis thaliana]
Length = 342
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/263 (70%), Positives = 227/263 (86%), Gaps = 5/263 (1%)
Query: 66 AERLLFTLADAAVSSSDAVTTT-----KQNSDWLSGITNVMETVLKVLKDGMSTLHVPYA 120
AE LL+T+ADAAV +D+V TT +++ W I++ ME VLK+LKDG+S +HVPYA
Sbjct: 80 AESLLYTIADAAVVGADSVVTTDSSAVQKSGGWFGFISDAMELVLKILKDGLSAVHVPYA 139
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YGFAIILLT+IVKAAT+PLTK+QVES++AM++L P++KAIQ+RYAG+QERIQLET+RLYK
Sbjct: 140 YGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYK 199
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
AG+NPLAGCLPTLATIPVWIGLY+ALSNVA+EGL TEGFFWIPSL GPT+IAARQ+GSG
Sbjct: 200 QAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTSIAARQSGSG 259
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
ISWLFPFVDGHPPLGW DT AYLVLPVLL+ SQY+S++I++ Q +DP K++ + FL
Sbjct: 260 ISWLFPFVDGHPPLGWYDTVAYLVLPVLLIASQYVSMEIMKPPQTDDPAQKNTLLVFKFL 319
Query: 301 PLMIGYFALSVPSGLSLYWFTNN 323
PLMIGYFALSVPSGLS+YW +
Sbjct: 320 PLMIGYFALSVPSGLSIYWLAHK 342
>gi|30684018|ref|NP_850125.1| inner membrane protein ALBINO3 [Arabidopsis thaliana]
gi|330253079|gb|AEC08173.1| inner membrane protein ALBINO3 [Arabidopsis thaliana]
Length = 348
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/262 (70%), Positives = 227/262 (86%), Gaps = 5/262 (1%)
Query: 66 AERLLFTLADAAVSSSDAVTTT-----KQNSDWLSGITNVMETVLKVLKDGMSTLHVPYA 120
AE LL+T+ADAAV +D+V TT +++ W I++ ME VLK+LKDG+S +HVPYA
Sbjct: 80 AESLLYTIADAAVVGADSVVTTDSSAVQKSGGWFGFISDAMELVLKILKDGLSAVHVPYA 139
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YGFAIILLT+IVKAAT+PLTK+QVES++AM++L P++KAIQ+RYAG+QERIQLET+RLYK
Sbjct: 140 YGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYK 199
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
AG+NPLAGCLPTLATIPVWIGLY+ALSNVA+EGL TEGFFWIPSL GPT+IAARQ+GSG
Sbjct: 200 QAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTSIAARQSGSG 259
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
ISWLFPFVDGHPPLGW DT AYLVLPVLL+ SQY+S++I++ Q +DP K++ + FL
Sbjct: 260 ISWLFPFVDGHPPLGWYDTVAYLVLPVLLIASQYVSMEIMKPPQTDDPAQKNTLLVFKFL 319
Query: 301 PLMIGYFALSVPSGLSLYWFTN 322
PLMIGYFALSVPSGLS+YW +
Sbjct: 320 PLMIGYFALSVPSGLSIYWLVS 341
>gi|334184544|ref|NP_001189626.1| inner membrane protein ALBINO3 [Arabidopsis thaliana]
gi|330253081|gb|AEC08175.1| inner membrane protein ALBINO3 [Arabidopsis thaliana]
Length = 432
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/346 (54%), Positives = 243/346 (70%), Gaps = 53/346 (15%)
Query: 66 AERLLFTLADAAVSSSDAVTTT-----KQNSDWLSGITNVMETVLKVLKDGMSTLHVPYA 120
AE LL+T+ADAAV +D+V TT +++ W I++ ME VLK+LKDG+S +HVPYA
Sbjct: 80 AESLLYTIADAAVVGADSVVTTDSSAVQKSGGWFGFISDAMELVLKILKDGLSAVHVPYA 139
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YGFAIILLT+IVKAAT+PLTK+QVES++AM++L P++KAIQ+RYAG+QERIQLET+RLYK
Sbjct: 140 YGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYK 199
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
AG+NPLAG FFWIPSL GPT+IAARQ+GSG
Sbjct: 200 QAGVNPLAG------------------------------FFWIPSLGGPTSIAARQSGSG 229
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
ISWLFPFVDGHPPLGW DT AYLVLPVLL+ SQY+S++I++ Q +DP K++ + FL
Sbjct: 230 ISWLFPFVDGHPPLGWYDTVAYLVLPVLLIASQYVSMEIMKPPQTDDPAQKNTLLVFKFL 289
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDERLDINKS 360
PLMIGYFALSVPSGLS+YW TNN+LSTAQQV+L+K GGAK M DE
Sbjct: 290 PLMIGYFALSVPSGLSIYWLTNNVLSTAQQVYLRKLGGAKPNM--------DEN------ 335
Query: 361 VPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRRQQREEEK 406
+S A +A++ + GE+F+Q++EQE R ++ + K
Sbjct: 336 ----ASKIISAGRAKRSIAQPDDAGERFRQLKEQEKRSKKNKAVAK 377
>gi|108712059|gb|ABF99854.1| ARTEMIS protein, chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 372
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 187/350 (53%), Positives = 242/350 (69%), Gaps = 27/350 (7%)
Query: 168 QERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLA 227
+ERIQLETARLYKL+ ++PLAGCLPTL TIPVWIGLYRALSNVA+EGLLTEGFFWIPSLA
Sbjct: 36 KERIQLETARLYKLSDVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLA 95
Query: 228 GPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNND 287
GPTTIAARQ+G GISWLFPF DGHPPLGWSDT AYLVLPVLLV+SQY+S +++Q QNND
Sbjct: 96 GPTTIAARQSGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYVSSQVMQPPQNND 155
Query: 288 PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFS 347
P+ + +QA+ FLPL+IGYFALSVPSGLSLYW TNN+LSTAQQVWLQK GGAK+P+K++
Sbjct: 156 PSQQGAQAVVKFLPLLIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVKEYI 215
Query: 348 D-IIKDERLDINKSVPGLSST------KKEARQAEKLTTEGPRPGEKFKQIREQEARRRQ 400
D + K+E ++ K P + S K A Q + + GP+ GE+F++++E+E+RR+
Sbjct: 216 DKLAKEESTNLGKPEPAIKSDPLPKVGKPPASQEPEPS--GPQRGERFRKLKEEESRRKV 273
Query: 401 QREEEKRKAAEAAAKGNQTINGEQEREASILGSAKGVQTDLVDKDD--ENFPSVTGDNA- 457
EK + E A ++G+Q +AS D +D+ + EN P + N
Sbjct: 274 FL--EKAEQTEQAGTQAGIVDGKQNSDAS---------GDNIDEQESHENEPIIANGNGG 322
Query: 458 ---SNIGVAINGNISSHEFKENQDTISVFRTGDNEVSANSEVDGRNEQQS 504
S + NG++ +E+ D+ S + A+ D NEQ +
Sbjct: 323 LSHSTNEMIPNGSMKEDIIQESTDSHSSVIDPTSH-DAHKSRDEENEQDA 371
>gi|384250016|gb|EIE23496.1| hypothetical protein COCSUDRAFT_15426 [Coccomyxa subellipsoidea
C-169]
Length = 332
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 171/271 (63%), Positives = 217/271 (80%), Gaps = 11/271 (4%)
Query: 74 ADAAVSSSDAVTT--------TKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAI 125
ADA VSS+ AV + ++++ W T ETVLKVL G+ LHVPY+YGF+I
Sbjct: 20 ADAIVSSATAVQSATDAAAEAVQRDNGWFGFFTGPFETVLKVLDTGLDKLHVPYSYGFSI 79
Query: 126 ILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAG-DQERIQLETARLYKLAGI 184
ILLT+ VKA TFPL+KKQVES++A+++L P+VK IQE+Y G D + Q+E A+LY+ A +
Sbjct: 80 ILLTIFVKALTFPLSKKQVESTVAIQALQPRVKEIQEKYKGRDPQEAQIEVAKLYQEAKV 139
Query: 185 NPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWL 244
NPLAGCLPTL T+PVWIGLYRALSNVADEGLL+EGFFWIPSLAGPTT+AA++ G+G SWL
Sbjct: 140 NPLAGCLPTLITLPVWIGLYRALSNVADEGLLSEGFFWIPSLAGPTTLAAQKAGAG-SWL 198
Query: 245 FPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMI 304
FP V+G PP+GW D AYLVLPVLL+VSQY+S KII S + DP+ +S+Q + FLPLMI
Sbjct: 199 FPLVNGAPPIGWHDASAYLVLPVLLIVSQYVSQKII-SPPSEDPSQQSAQWILKFLPLMI 257
Query: 305 GYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
G+F+L+VPSGL++YWF NN+LSTAQQ+WL+K
Sbjct: 258 GWFSLNVPSGLTIYWFINNVLSTAQQLWLKK 288
>gi|359478973|ref|XP_003632199.1| PREDICTED: inner membrane protein PPF-1, chloroplastic isoform 2
[Vitis vinifera]
Length = 425
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 185/335 (55%), Positives = 233/335 (69%), Gaps = 57/335 (17%)
Query: 66 AERLLFTLADAAV---------SSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLH 116
AE LL+TLADAAV +S A ++N W I+ ME VLKVL+DG++ +H
Sbjct: 66 AESLLYTLADAAVSADPAAAGPASGTADAAVQKNGGWFGFISEGMEVVLKVLEDGLTAVH 125
Query: 117 VPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETA 176
VPYAYGFAIILLTVIVK AT+PLTKKQVES++AM++L P++KAIQERY G+QERIQLET+
Sbjct: 126 VPYAYGFAIILLTVIVKIATYPLTKKQVESTLAMQNLQPKIKAIQERYKGNQERIQLETS 185
Query: 177 RLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ 236
RLYK AG+NPLAG FFWIPSL GPTTIAARQ
Sbjct: 186 RLYKQAGVNPLAG------------------------------FFWIPSLGGPTTIAARQ 215
Query: 237 NGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
+GSGISWL PFVDGHPPLGW DT AYLVLPVLLV+SQY+S+++++ Q +DP+ K++ +
Sbjct: 216 SGSGISWLIPFVDGHPPLGWQDTAAYLVLPVLLVISQYVSMELMKPPQTDDPSQKNTLLV 275
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDERLD 356
FLPLMIGYF+LSVPSGLS+YWFTNN+LSTAQQVWL+K GGAK P+
Sbjct: 276 FKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAK-PV------------- 321
Query: 357 INKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQI 391
+N+ G+ + + R A ++ R G++F+Q+
Sbjct: 322 VNEDASGIITAGRAKRSA----SQPARAGDRFRQL 352
>gi|223973321|gb|ACN30848.1| unknown [Zea mays]
gi|413947416|gb|AFW80065.1| hypothetical protein ZEAMMB73_868395 [Zea mays]
Length = 297
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 161/253 (63%), Positives = 198/253 (78%), Gaps = 22/253 (8%)
Query: 148 MAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRAL 207
MAM++L PQ+KAIQ+RYAG+QERIQLETARLY+ AG+NPLAGC PTLATIPVWIGLY+AL
Sbjct: 1 MAMQNLQPQLKAIQQRYAGNQERIQLETARLYRQAGVNPLAGCFPTLATIPVWIGLYQAL 60
Query: 208 SNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPV 267
SNVA+EGLLTEGFFWIPSL GPTTIAARQ+G+GISWLFPFVDGHPPLGW DT YLVLPV
Sbjct: 61 SNVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPLGWYDTICYLVLPV 120
Query: 268 LLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLST 327
LLV SQY+S++I++ Q++DP+ K++ + FLP MIGYF+LSVPSGLS+YWFTNN+LST
Sbjct: 121 LLVASQYVSMEIMKPPQSDDPSQKNTLLVLKFLPFMIGYFSLSVPSGLSIYWFTNNVLST 180
Query: 328 AQQVWLQKFGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRP-GE 386
AQQVWL+K GGAK P +S + A + +P GE
Sbjct: 181 AQQVWLRKMGGAK---------------------PVVSEGDRRIITAGRAKRSNAQPAGE 219
Query: 387 KFKQIREQEARRR 399
+F+Q++E+E+ R+
Sbjct: 220 RFRQLKEEESMRK 232
>gi|302836307|ref|XP_002949714.1| inner membrane ALBINO3-like protein 2, chloroplast precursor
[Volvox carteri f. nagariensis]
gi|300265073|gb|EFJ49266.1| inner membrane ALBINO3-like protein 2, chloroplast precursor
[Volvox carteri f. nagariensis]
Length = 413
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/297 (57%), Positives = 216/297 (72%), Gaps = 24/297 (8%)
Query: 39 RGSICVAKFGLRPDPNSADGVKELLGVAERLLFTLADAAVSSSDAVTTTKQNSDWLSGIT 98
R ++CV L DP++A E + A+ L +TLAD + +
Sbjct: 41 RAAVCVKASLL--DPSTAASTVEAVQHAQNL-YTLADGGP---------------IDLLA 82
Query: 99 NVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVK 158
+VL+ L DG+ HVPY+YGFAII LTV+VK ATFPLT+KQVES++++++L P+VK
Sbjct: 83 QFFTSVLRTLDDGLENAHVPYSYGFAIITLTVLVKLATFPLTQKQVESTLSLQALQPRVK 142
Query: 159 AIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTE 218
+Q ++A D E +QLETAR+YK AG+NPLAGCLPTLATIPV+IGLY ALSN A GLLTE
Sbjct: 143 ELQAKHADDPETLQLETARMYKEAGVNPLAGCLPTLATIPVFIGLYNALSNAAKAGLLTE 202
Query: 219 GFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVK 278
GFFWIPSL+GPTTI G G+ WLFPF DG PP+GW++ AYLV+PVLLV SQY S K
Sbjct: 203 GFFWIPSLSGPTTI-----GGGLEWLFPFQDGAPPVGWANAAAYLVMPVLLVASQYASQK 257
Query: 279 IIQSSQN-NDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
II ++QN NDP + SQA+ FLPLMIG+F+L+VPSGL+LYWF NNLLSTAQQ++L+
Sbjct: 258 IISTTQNSNDPAQQQSQAILKFLPLMIGWFSLNVPSGLTLYWFVNNLLSTAQQLYLK 314
>gi|255076059|ref|XP_002501704.1| cytochrome oxidase biogenesis family [Micromonas sp. RCC299]
gi|226516968|gb|ACO62962.1| cytochrome oxidase biogenesis family [Micromonas sp. RCC299]
Length = 480
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 155/249 (62%), Positives = 195/249 (78%), Gaps = 2/249 (0%)
Query: 89 QNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSM 148
Q WL IT+++E++LK + G L VPY+YG+AI+ LTV+VK TFPLTKKQVE S+
Sbjct: 110 QKGGWLGPITDLLESILKGIDSGFVGLGVPYSYGYAILALTVLVKVVTFPLTKKQVEGSL 169
Query: 149 AMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALS 208
M+++ P+VK +Q YA D ER+Q+ETARLYK A NPLAGCLPT AT+PV+IGLYRALS
Sbjct: 170 QMQAIQPRVKELQAMYANDPERLQMETARLYKEANFNPLAGCLPTFATLPVFIGLYRALS 229
Query: 209 NVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVL 268
N A EG LT+GF+WIPSL GPT+I AR +G+G +WLFPFVDG PPLGW DT AYLVLPVL
Sbjct: 230 NAAVEGELTDGFYWIPSLGGPTSIEARNDGNGFAWLFPFVDGAPPLGWHDTIAYLVLPVL 289
Query: 269 LVVSQYISVKIIQSSQ--NNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLS 326
LV SQ IS K++ Q ++DP + SQA+ FLP MIG+F+L+VP+GL+LYWF NN+ S
Sbjct: 290 LVASQLISQKVMTPDQPKSDDPAQQQSQAILKFLPFMIGFFSLNVPAGLTLYWFANNIFS 349
Query: 327 TAQQVWLQK 335
TAQ V+L+K
Sbjct: 350 TAQTVYLRK 358
>gi|303286693|ref|XP_003062636.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545]
gi|226456153|gb|EEH53455.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545]
Length = 483
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 166/277 (59%), Positives = 209/277 (75%), Gaps = 3/277 (1%)
Query: 70 LFTLADAAVSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLT 129
+F +ADAA + + Q WL IT+ +E L V+ G+ L+VPY+YG+AI++LT
Sbjct: 91 IFQVADAAAVDVEEIPGL-QKGGWLGPITDFLEASLGVIDQGLEGLNVPYSYGYAILVLT 149
Query: 130 VIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAG 189
V+VK TFPLTKKQVE S+AM++L P+VK +Q YA D ER+Q+ETARLYK A NPLAG
Sbjct: 150 VVVKLVTFPLTKKQVEGSIAMQALQPRVKELQAMYANDPERLQMETARLYKEANFNPLAG 209
Query: 190 CLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVD 249
CLPT AT+PV+IGLYRALSN A EG+L +GF+WIPSL GPT+IAAR +GSG SWL+PFVD
Sbjct: 210 CLPTFATLPVFIGLYRALSNAATEGMLEDGFYWIPSLGGPTSIAARNDGSGFSWLWPFVD 269
Query: 250 GHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNN--DPNMKSSQALTNFLPLMIGYF 307
G PPLGW DT AYL LPVLLVVSQ+ S KI+ Q DP+ SSQA+ FLP MIG+F
Sbjct: 270 GAPPLGWHDTAAYLALPVLLVVSQFASQKIMTPDQGKDVDPSQASSQAILKFLPFMIGFF 329
Query: 308 ALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMK 344
+L+VP+GL+LYWF NN+ STAQ V+L+K A D ++
Sbjct: 330 SLNVPAGLTLYWFANNIFSTAQTVYLRKTTKAPDSIQ 366
>gi|145344819|ref|XP_001416922.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like
protein [Ostreococcus lucimarinus CCE9901]
gi|144577148|gb|ABO95215.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like
protein [Ostreococcus lucimarinus CCE9901]
Length = 271
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 156/255 (61%), Positives = 201/255 (78%), Gaps = 2/255 (0%)
Query: 89 QNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSM 148
Q WL IT+ +E+ L+ + D + VPY+YGF+II+LTV+VK ATFPL+KKQVESSM
Sbjct: 9 QKGGWLGPITDGLESALEGI-DSVLDGRVPYSYGFSIIVLTVLVKLATFPLSKKQVESSM 67
Query: 149 AMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALS 208
M+++ P++K +Q YA D ER+Q+E ARLYK AG NPLAGCLP AT+PV+IGLYRALS
Sbjct: 68 QMQAMQPRIKELQAMYANDPERLQMEQARLYKEAGFNPLAGCLPVFATLPVFIGLYRALS 127
Query: 209 NVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVL 268
N A EGLLT+GF+WIPSL GPT+IA+R GSG +WL+PFVDGHPPLGW DT AYLVLPVL
Sbjct: 128 NAASEGLLTDGFYWIPSLGGPTSIASRNAGSGFAWLWPFVDGHPPLGWHDTTAYLVLPVL 187
Query: 269 LVVSQYISVKIIQ-SSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLST 327
LV SQY+S +I+ + +DP + SQA+ FLPLMIG+F+L+VP+GL+LYWF NN+++T
Sbjct: 188 LVASQYVSQQIVSPQPKTDDPAQQQSQAILKFLPLMIGFFSLNVPAGLTLYWFANNIITT 247
Query: 328 AQQVWLQKFGGAKDP 342
AQ + L+K A +P
Sbjct: 248 AQTLILRKTTTAPEP 262
>gi|38372239|sp|Q8LKI3.1|ALB32_CHLRE RecName: Full=Inner membrane ALBINO3-like protein 2, chloroplastic;
Flags: Precursor
gi|21361062|gb|AAM49792.1|AF514291_1 albino 3-like protein [Chlamydomonas reinhardtii]
Length = 422
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 151/238 (63%), Positives = 189/238 (79%), Gaps = 5/238 (2%)
Query: 97 ITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQ 156
+ E VL+ L +G+ + +PY+YGFAII LTV+VK ATFPLT+KQVES++++++L P+
Sbjct: 77 LAQFFEFVLQTLDEGLESAKIPYSYGFAIIALTVLVKVATFPLTQKQVESTLSLQALQPR 136
Query: 157 VKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLL 216
VK +Q +YA D E +QLETARLYK AG+NPLAGC PTLATIPV+IGLY ALSN A EGLL
Sbjct: 137 VKELQAKYADDPENLQLETARLYKEAGVNPLAGCFPTLATIPVFIGLYNALSNAAKEGLL 196
Query: 217 TEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYIS 276
TEGFFWIPSL GPTTI G G+ WL PF +G PP+GW++ AYLV+PVLLV SQY S
Sbjct: 197 TEGFFWIPSLGGPTTI-----GGGLEWLVPFENGAPPVGWANAAAYLVMPVLLVASQYAS 251
Query: 277 VKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
KII S N DP+ + +QA+ FLPLMIG+F+L+VPSGL+LYWF NNLLST QQ++L+
Sbjct: 252 QKIISSQNNQDPSQQQAQAILKFLPLMIGWFSLNVPSGLTLYWFVNNLLSTGQQLYLK 309
>gi|307105705|gb|EFN53953.1| hypothetical protein CHLNCDRAFT_25162, partial [Chlorella
variabilis]
Length = 423
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 151/232 (65%), Positives = 196/232 (84%), Gaps = 6/232 (2%)
Query: 105 LKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERY 164
LKVL DG+ + VPY+YGFAIILLTV+VK AT+PLTK+QVES+++M+++ P+VK +Q +Y
Sbjct: 108 LKVLDDGLEKVGVPYSYGFAIILLTVLVKVATYPLTKQQVESTLSMQAMQPRVKELQAKY 167
Query: 165 AGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIP 224
A D ER+Q+ETA++Y+ AG+NPLAGCLP+LATIPV+IGLY+ALSNVA EGLLT+GFFWIP
Sbjct: 168 ANDPERLQVETAKMYQTAGVNPLAGCLPSLATIPVFIGLYKALSNVASEGLLTDGFFWIP 227
Query: 225 SLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQ-SS 283
SLAGPTT+ NG G+ WLF + DG P LG+ T AYLVLP+LLVVSQ IS K+I
Sbjct: 228 SLAGPTTV----NG-GLDWLFKWQDGAPLLGYGQTAAYLVLPILLVVSQAISQKVISPPQ 282
Query: 284 QNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
Q+NDP + +QA+ FLPLMIG+F+L+VPSGL+LYWFTNNL++TAQQ++L++
Sbjct: 283 QSNDPAQQQTQAILKFLPLMIGWFSLNVPSGLTLYWFTNNLITTAQQLYLRR 334
>gi|297592067|gb|ADI46852.1| ALB3_1f [Volvox carteri f. nagariensis]
Length = 474
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 154/271 (56%), Positives = 209/271 (77%), Gaps = 2/271 (0%)
Query: 83 AVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKK 142
A T ++ W++ + +V+E VL VLKD + LHVPY+YG++IILLT+IVK T+PLTK+
Sbjct: 96 ASPTDQRAGGWVAPLADVLEQVLYVLKDCLDLLHVPYSYGYSIILLTLIVKIVTYPLTKQ 155
Query: 143 QVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIG 202
QVES++A+++L P+V I++R+ D+E+IQ ET+ LY+ AG+NPLAGCLPTLAT P++IG
Sbjct: 156 QVESTLAVQALKPRVDLIKDRFGDDKEKIQKETSILYEQAGVNPLAGCLPTLATTPIFIG 215
Query: 203 LYRALSNVADEGLL-TEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFA 261
LY +L+NVA+EGLL T+GF+WIPSLAGPTT+A RQ+G G SWLFP VDG P +GW A
Sbjct: 216 LYSSLTNVANEGLLDTQGFYWIPSLAGPTTLAQRQSGLGTSWLFPLVDGAPAIGWDAAVA 275
Query: 262 YLVLPVLLVVSQYISVKII-QSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWF 320
YL LPVLL++ QY S+ +S D N + +AL LP+MIG+FAL+VPSGLSLY+
Sbjct: 276 YLTLPVLLILVQYASLYSTGPTSDATDVNARLQRALLLGLPVMIGWFALNVPSGLSLYYL 335
Query: 321 TNNLLSTAQQVWLQKFGGAKDPMKQFSDIIK 351
+N +LSTAQQV+L+K GGAK +K+ I+K
Sbjct: 336 SNTILSTAQQVYLKKLGGAKVAIKKLGPIMK 366
>gi|424513249|emb|CCO66833.1| predicted protein [Bathycoccus prasinos]
Length = 510
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 146/249 (58%), Positives = 192/249 (77%), Gaps = 2/249 (0%)
Query: 89 QNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSM 148
Q WL ITN +E+ L+ + ++ + +YGF+I+ LT++VK TFPLTKKQ+E S+
Sbjct: 151 QKGGWLGPITNALESTLEGIDGILAPVAGTNSYGFSILALTLLVKLVTFPLTKKQIEGSV 210
Query: 149 AMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALS 208
M++L P+VK +Q YA D ER+Q+ETARLYK A NPLAGCLPT AT+PV+IGLYRALS
Sbjct: 211 NMQALQPKVKELQAMYANDPERLQMETARLYKEANFNPLAGCLPTFATLPVFIGLYRALS 270
Query: 209 NVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVL 268
N + EGLL +GF+WIPSL GP TI R +G+G SWLFP VDG PP+GW D +YLVLPVL
Sbjct: 271 NASVEGLLQDGFYWIPSLGGPATIEMRNDGAGFSWLFPLVDGAPPIGWHDALSYLVLPVL 330
Query: 269 LVVSQYISVKIIQ--SSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLS 326
LV+SQ +S KI+Q S+++ DP + SQA+ FLPLMIGYF+L+VP+GL+LYWF NN+++
Sbjct: 331 LVISQSVSQKIMQPESAKSADPAQQQSQAILKFLPLMIGYFSLNVPAGLTLYWFFNNIVT 390
Query: 327 TAQQVWLQK 335
TAQ V+L+K
Sbjct: 391 TAQTVYLRK 399
>gi|308801639|ref|XP_003078133.1| putative PPF-1 protein (ISS) [Ostreococcus tauri]
gi|116056584|emb|CAL52873.1| putative PPF-1 protein (ISS) [Ostreococcus tauri]
Length = 455
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 149/248 (60%), Positives = 195/248 (78%), Gaps = 2/248 (0%)
Query: 89 QNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSM 148
Q WL IT+ +E L+ + DG+ VPY+YG++I+LLTV+VK ATFPL+K+QVESS+
Sbjct: 104 QKGGWLGPITDALEGALRGI-DGVLDGKVPYSYGYSILLLTVLVKLATFPLSKQQVESSI 162
Query: 149 AMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALS 208
M+++ P++K +Q YA D ER+QLE ARLY+ AG NPLAGCLP AT+PV+IGLYRALS
Sbjct: 163 QMQAMQPRIKELQAMYANDPERLQLEQARLYREAGFNPLAGCLPLFATLPVFIGLYRALS 222
Query: 209 NVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVL 268
N A E LL +GF+WIPSL GPT+IAAR +G+G +WL+PFVDGHPPLGW +T YLVLPVL
Sbjct: 223 NAAAEHLLDDGFYWIPSLGGPTSIAARNDGNGFAWLWPFVDGHPPLGWYETGCYLVLPVL 282
Query: 269 LVVSQYISVKIIQ-SSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLST 327
LVVSQ++S II + +DP + SQA+ FLP MIG+F+L+VP+GL+LYWF NN+++T
Sbjct: 283 LVVSQFVSQTIISPQPKTDDPAQQQSQAILKFLPFMIGFFSLNVPAGLTLYWFFNNIITT 342
Query: 328 AQQVWLQK 335
AQ V L+K
Sbjct: 343 AQTVVLRK 350
>gi|57901135|gb|AAW57888.1| albino3-like protein [Gonium pectorale]
Length = 483
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 141/266 (53%), Positives = 196/266 (73%), Gaps = 2/266 (0%)
Query: 88 KQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESS 147
++ W++ + + +E VL VL++G+ LHVPY YG++IILLT+IVK T+PLTK+QVES+
Sbjct: 102 QRAGGWVAPLADALEQVLYVLQEGLDKLHVPYTYGYSIILLTLIVKLLTYPLTKQQVESA 161
Query: 148 MAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRAL 207
MA+++L P++ I++R+ D++++ ET+ LY+ AG+NPLAGCLPTLATIP++IGLY +L
Sbjct: 162 MAVQALKPRIDLIKDRFGDDKDKVSKETSALYEAAGVNPLAGCLPTLATIPIFIGLYSSL 221
Query: 208 SNVADEGLL-TEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLP 266
+NVA+ G L EGF+WIPSLAGPTT+A RQ+G G SWL P VDG PP+GW + AYL LP
Sbjct: 222 TNVANAGSLDAEGFYWIPSLAGPTTLAMRQSGLGTSWLLPLVDGAPPIGWPEAAAYLSLP 281
Query: 267 VLLVVSQYISVKIIQSSQN-NDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLL 325
V LV QY S + + D N + +AL LPLMIG+F+L+VPSGLSLY+ +N +L
Sbjct: 282 VALVAVQYASSALTSPPIDPKDENAGTQRALLVALPLMIGWFSLNVPSGLSLYYLSNTVL 341
Query: 326 STAQQVWLQKFGGAKDPMKQFSDIIK 351
S A QV+L+K GGA M + + K
Sbjct: 342 SAATQVYLKKLGGANVKMNELGPVTK 367
>gi|294846010|gb|ADF43168.1| ALB3m [Chlamydomonas reinhardtii]
Length = 493
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 140/274 (51%), Positives = 204/274 (74%), Gaps = 3/274 (1%)
Query: 81 SDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLT 140
S A ++ W++ + + +E VL L++G+ LHVPY+YG++IILLT+IVK T+PLT
Sbjct: 99 SAAGAAPQRAGGWVAPVADALEQVLYALQEGLDKLHVPYSYGYSIILLTLIVKLLTYPLT 158
Query: 141 KKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVW 200
K+QVES+MA+++L P++ I++R+ D+++IQ ET+ LY+ AG+NPLAGCLPTLATIP++
Sbjct: 159 KQQVESAMAVQALKPRIDLIKDRFGEDKDKIQKETSVLYEQAGVNPLAGCLPTLATIPIF 218
Query: 201 IGLYRALSNVADEGLL-TEGFFWIPSLAGPTTIAARQNGSGISWLFPF-VDGHPPLGWSD 258
IGL+ +L+NVA++GLL T+GF+++PSLAGPTT+A RQ+G G SWL+P DG PP+GW D
Sbjct: 219 IGLFSSLTNVANDGLLDTQGFYFVPSLAGPTTMAMRQSGLGTSWLWPLGPDGAPPIGWED 278
Query: 259 TFAYLVLPVLLVVSQYISVKIIQSSQN-NDPNMKSSQALTNFLPLMIGYFALSVPSGLSL 317
AYL LP+LLV QY S + + D N + +AL FLPLM+G+F+L+VP+GLSL
Sbjct: 279 AAAYLTLPLLLVAVQYASSSVTSPPIDPKDENANTQRALLVFLPLMVGWFSLNVPAGLSL 338
Query: 318 YWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIK 351
Y+ N +LS+A Q++L+K GGA M + + K
Sbjct: 339 YYLANTVLSSAIQIYLKKLGGANVVMNELGPVTK 372
>gi|159477094|ref|XP_001696646.1| inner membrane ALBINO3-like protein 1 [Chlamydomonas reinhardtii]
gi|158282871|gb|EDP08623.1| inner membrane ALBINO3-like protein 1 [Chlamydomonas reinhardtii]
gi|294845969|gb|ADF43128.1| ALB3p [Chlamydomonas reinhardtii]
Length = 495
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 140/274 (51%), Positives = 204/274 (74%), Gaps = 3/274 (1%)
Query: 81 SDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLT 140
S A ++ W++ + + +E VL L++G+ LHVPY+YG++IILLT+IVK T+PLT
Sbjct: 101 SAAGAAPQRAGGWVAPVADALEQVLYALQEGLDKLHVPYSYGYSIILLTLIVKLLTYPLT 160
Query: 141 KKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVW 200
K+QVES+MA+++L P++ I++R+ D+++IQ ET+ LY+ AG+NPLAGCLPTLATIP++
Sbjct: 161 KQQVESAMAVQALKPRIDLIKDRFGEDKDKIQKETSVLYEQAGVNPLAGCLPTLATIPIF 220
Query: 201 IGLYRALSNVADEGLL-TEGFFWIPSLAGPTTIAARQNGSGISWLFPF-VDGHPPLGWSD 258
IGL+ +L+NVA++GLL T+GF+++PSLAGPTT+A RQ+G G SWL+P DG PP+GW D
Sbjct: 221 IGLFSSLTNVANDGLLDTQGFYFVPSLAGPTTMAMRQSGLGTSWLWPLGPDGAPPIGWED 280
Query: 259 TFAYLVLPVLLVVSQYISVKIIQSSQN-NDPNMKSSQALTNFLPLMIGYFALSVPSGLSL 317
AYL LP+LLV QY S + + D N + +AL FLPLM+G+F+L+VP+GLSL
Sbjct: 281 AAAYLTLPLLLVAVQYASSSVTSPPIDPKDENANTQRALLVFLPLMVGWFSLNVPAGLSL 340
Query: 318 YWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIK 351
Y+ N +LS+A Q++L+K GGA M + + K
Sbjct: 341 YYLANTVLSSAIQIYLKKLGGANVVMNELGPVTK 374
>gi|38372242|sp|Q8S339.1|ALB31_CHLRE RecName: Full=Inner membrane ALBINO3-like protein 1, chloroplastic;
Flags: Precursor
gi|20136422|gb|AAM11662.1|AF492768_1 albino3-like protein [Chlamydomonas reinhardtii]
Length = 495
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 140/274 (51%), Positives = 204/274 (74%), Gaps = 3/274 (1%)
Query: 81 SDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLT 140
S A ++ W++ + + +E VL L++G+ LHVPY+YG++IILLT+IVK T+PLT
Sbjct: 101 SAAGAAPQRAGGWVAPVADALEQVLYALQEGLDKLHVPYSYGYSIILLTLIVKLLTYPLT 160
Query: 141 KKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVW 200
K+QVES+MA+++L P++ I++R+ D+++IQ ET+ LY+ AG+NPLAGCLPTLATIP++
Sbjct: 161 KQQVESAMAVQALKPRIDLIKDRFGEDKDKIQKETSVLYEQAGVNPLAGCLPTLATIPIF 220
Query: 201 IGLYRALSNVADEGLL-TEGFFWIPSLAGPTTIAARQNGSGISWLFPF-VDGHPPLGWSD 258
IGL+ +L+NVA++GLL T+GF+++PSLAGPTT+A RQ+G G SWL+P DG PP+GW D
Sbjct: 221 IGLFSSLTNVANDGLLDTQGFYFVPSLAGPTTMAMRQSGLGTSWLWPLGPDGAPPIGWED 280
Query: 259 TFAYLVLPVLLVVSQYISVKIIQSSQN-NDPNMKSSQALTNFLPLMIGYFALSVPSGLSL 317
AYL LP+LLV QY S + + D N + +AL FLPLM+G+F+L+VP+GLSL
Sbjct: 281 AAAYLTLPLLLVAVQYASSSVTSPPIDPKDENANTQRALLVFLPLMVGWFSLNVPAGLSL 340
Query: 318 YWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIK 351
Y+ N +LS+A Q++L+K GGA M + + K
Sbjct: 341 YYLANTVLSSAIQIYLKKLGGANVVMNELGPVTK 374
>gi|297592153|gb|ADI46937.1| ALB3_1m [Volvox carteri f. nagariensis]
Length = 455
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/261 (57%), Positives = 201/261 (77%), Gaps = 2/261 (0%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W++ ++N ME VL V +D + LHVPYAYG++IILLT++VK T+PL K+QVES++A+++
Sbjct: 109 WVAPLSNAMEQVLYVFRDALDELHVPYAYGYSIILLTLVVKILTYPLVKQQVESALAVQA 168
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+V I++R+ D E+I+ ET+ LY+ AG+NPLAGCLPTLATIPV+IGLY +L+NVA+
Sbjct: 169 LKPRVDLIKDRFGDDTEKIRKETSVLYEQAGVNPLAGCLPTLATIPVFIGLYTSLTNVAN 228
Query: 213 EGLL-TEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVV 271
GLL T+GF+WIPSLAGPTT+A RQ+G G SWLFPFVDG PP+GW YLVLPVLLV+
Sbjct: 229 GGLLDTQGFYWIPSLAGPTTLAQRQSGLGTSWLFPFVDGAPPIGWGAAATYLVLPVLLVL 288
Query: 272 SQYISVKIIQSSQN-NDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
QY+S + + ND N + L LPLMIG+FAL+VPSGLSLY+ +N +LS AQQ
Sbjct: 289 VQYVSSYLTNPPIDPNDENASMQRILLLGLPLMIGWFALNVPSGLSLYYLSNTVLSAAQQ 348
Query: 331 VWLQKFGGAKDPMKQFSDIIK 351
V+L+K GGA+ + + I+K
Sbjct: 349 VYLKKLGGARVSINELGPIMK 369
>gi|384252275|gb|EIE25751.1| hypothetical protein COCSUDRAFT_12888 [Coccomyxa subellipsoidea
C-169]
Length = 324
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 134/264 (50%), Positives = 189/264 (71%), Gaps = 3/264 (1%)
Query: 81 SDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLT 140
A+ Q+ WL+ I++ + L+ ++ G+ LHVPY+YG+AII+LTV K TFP T
Sbjct: 10 CSALQAAAQDDGWLAPISSGLNYSLQQIQTGLDQLHVPYSYGWAIIVLTVGTKILTFPFT 69
Query: 141 KKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVW 200
K VES++A++ L P + AI+ +Y D+ IQ ET+ LY+ +G+NP AGCLPTLATIP++
Sbjct: 70 K--VESALAVQKLKPTIDAIKRQYGEDKNSIQRETSALYEASGVNPAAGCLPTLATIPIF 127
Query: 201 IGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTF 260
GLYR LSNVA GLLTEGF+WIPSL+GPT++AA++ G+G +WLFPFVDG PP+GW D
Sbjct: 128 WGLYRTLSNVASAGLLTEGFYWIPSLSGPTSLAAQRAGTGTAWLFPFVDGAPPVGWEDAA 187
Query: 261 AYLVLPVLLVVSQYISVKIIQSS-QNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYW 319
YL LP+ LV +Q+ S +I + D N S+ L +P M+G+FAL+VPSGLSLY+
Sbjct: 188 RYLALPIALVAAQFASSAVISPPIDDEDKNAAFSKGLLIAVPFMVGWFALNVPSGLSLYY 247
Query: 320 FTNNLLSTAQQVWLQKFGGAKDPM 343
F+N ++++ Q+WL+K GGA P+
Sbjct: 248 FSNTIITSGIQIWLRKLGGAYSPL 271
>gi|449019683|dbj|BAM83085.1| chloroplast membrane protein ALBINO3 or ARTEMIS [Cyanidioschyzon
merolae strain 10D]
Length = 488
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 133/272 (48%), Positives = 184/272 (67%), Gaps = 9/272 (3%)
Query: 89 QNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSM 148
Q + +G +++ET++ D ++ L VP +YGFAII LT+IVKA TFPL KQ++S+M
Sbjct: 185 QKAGLWNGFVHLIETIITGTGDTLAALGVPGSYGFAIIFLTIIVKAITFPLNYKQMKSTM 244
Query: 149 AMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALS 208
AM++LAP+V+ +Q RY + + + LETARLY+ A +NPL GCLP +PVWI LYRAL
Sbjct: 245 AMQALAPKVRELQARYRDNPQLLNLETARLYQEAKVNPLTGCLPVFVQLPVWIALYRALM 304
Query: 209 NVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVL 268
N+A + L +GFFW+PSL GP RQ SWLFPF +G PP+GW D AYLVLP L
Sbjct: 305 NLAADNRLDQGFFWLPSLEGPV----RQGQGLSSWLFPFQNGAPPIGWHDAIAYLVLPCL 360
Query: 269 LVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTA 328
LVVSQ IS KI+Q + + + A+ FLP M+G+F+L+VPSGL LYW TNN++ST
Sbjct: 361 LVVSQSISQKILQPPVQDP-QQQQANAILRFLPFMVGWFSLNVPSGLGLYWVTNNIVSTI 419
Query: 329 QQVWLQKFGGAKDPMK----QFSDIIKDERLD 356
Q + ++++ +K P + + D DERL+
Sbjct: 420 QTIGIKRYLASKQPERVGAPRTLDGAVDERLN 451
>gi|414873895|tpg|DAA52452.1| TPA: hypothetical protein ZEAMMB73_865472 [Zea mays]
Length = 313
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/206 (60%), Positives = 166/206 (80%), Gaps = 15/206 (7%)
Query: 204 YRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYL 263
Y L+++ +GLLTEGFFWIPSLAGPTTIAA+QNG GISWLFPF DGHPPLGWSDT AYL
Sbjct: 18 YLVLTHL--QGLLTEGFFWIPSLAGPTTIAAQQNGQGISWLFPFTDGHPPLGWSDTLAYL 75
Query: 264 VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNN 323
VLPVLLV+SQYIS +++Q Q+NDP+ + +QA+T FLPL+IGYFALSVPSGL LYW TNN
Sbjct: 76 VLPVLLVISQYISSQVMQPPQSNDPSQQGAQAVTKFLPLLIGYFALSVPSGLGLYWLTNN 135
Query: 324 LLSTAQQVWLQKFGGAKDPMKQFSD-IIKDERLDINKS--------VPGLSSTKKEARQA 374
+LSTAQQVWLQK GGAK+P+K++ D + ++E ++ K+ +P LS +A+ +
Sbjct: 136 ILSTAQQVWLQKLGGAKNPVKEYIDKLSREESTNVQKNGSTVQSKPLPKLS----KAQPS 191
Query: 375 EKLTTEGPRPGEKFKQIREQEARRRQ 400
++L GP+ GE+F++++E+E+RR++
Sbjct: 192 QELKPTGPQRGERFRKLKEEESRRKE 217
>gi|307105163|gb|EFN53413.1| hypothetical protein CHLNCDRAFT_136603 [Chlorella variabilis]
Length = 496
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 132/272 (48%), Positives = 188/272 (69%), Gaps = 24/272 (8%)
Query: 88 KQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQ---- 143
K+++ WL + +ETVL ++DG+ + VPY+YG++I+ LT ++K ATFPLTKKQ
Sbjct: 134 KKDNGWLQPLVTGLETVLTFIEDGLVRVGVPYSYGWSIVALTALIKLATFPLTKKQARPG 193
Query: 144 --------------VESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAG 189
VES++ ++ L PQ+ AI+E+Y +++ +Q ET+ LY+ AG++PLAG
Sbjct: 194 PGPPAPFRPCLPPRVESALNVQRLKPQIDAIKEQYGDNKDAVQRETSALYEKAGVDPLAG 253
Query: 190 CLPTLATIPVWIGLYRALSNVADEGLL-TEGFFWIPSLAGPTTIAARQNGSGISWLFPFV 248
CLP+LATIP++IGLYR+LS+ + + + F+WIPSLAGPT++AA++ GSG +WL P V
Sbjct: 254 CLPSLATIPIFIGLYRSLSDFSTQQEAGSAAFYWIPSLAGPTSVAAQKAGSGTAWLLPLV 313
Query: 249 DGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPN-MKSSQALTNFLPLMIGYF 307
DG PP+GW YL LPV L YIS II Q +D K +Q L LPLMIG+F
Sbjct: 314 DGVPPIGWDLASRYLALPVAL----YISNAIITPPQTDDSGAAKFTQNLVKVLPLMIGWF 369
Query: 308 ALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGA 339
AL+VP+GLSLY+F+N + +TAQQV+L+K GGA
Sbjct: 370 ALNVPAGLSLYYFSNTVFTTAQQVYLKKLGGA 401
>gi|297601977|ref|NP_001051873.2| Os03g0844700 [Oryza sativa Japonica Group]
gi|255675045|dbj|BAF13787.2| Os03g0844700, partial [Oryza sativa Japonica Group]
Length = 173
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/141 (80%), Positives = 129/141 (91%)
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNG 238
YKL+ ++PLAGCLPTL TIPVWIGLYRALSNVA+EGLLTEGFFWIPSLAGPTTIAARQ+G
Sbjct: 1 YKLSDVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAARQSG 60
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTN 298
GISWLFPF DGHPPLGWSDT AYLVLPVLLV+SQY+S +++Q QNNDP+ + +QA+
Sbjct: 61 QGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYVSSQVMQPPQNNDPSQQGAQAVVK 120
Query: 299 FLPLMIGYFALSVPSGLSLYW 319
FLPL+IGYFALSVPSGLSLYW
Sbjct: 121 FLPLLIGYFALSVPSGLSLYW 141
>gi|452822623|gb|EME29641.1| preprotein translocase, Oxa1 family [Galdieria sulphuraria]
Length = 454
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/282 (43%), Positives = 180/282 (63%), Gaps = 14/282 (4%)
Query: 62 LLG--VAERLLFTLADAAVSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPY 119
LLG A +L +A+A + A T +N N ++T + + + +PY
Sbjct: 94 LLGNRFATQLQTLVAEATDQVTSATTEVAKNPGLFDSFVNAIQTSVTMFHGYLEGAGLPY 153
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
A+GF+IIL T++VK TFPL KQ+ES+++M++L P+VK +Q Y + + + +ETA+LY
Sbjct: 154 AWGFSIILFTILVKLVTFPLNYKQMESTLSMQALQPKVKELQALYKDNPQLLNMETAKLY 213
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
K + INPLAGCLP L IPVWI LYRAL N+A + EGFF++PSL GP + + G
Sbjct: 214 KESNINPLAGCLPVLVQIPVWIALYRALLNLASTDQIHEGFFFVPSLDGPVS----RVGQ 269
Query: 240 GI-SWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYI------SVKIIQSSQNNDPNMKS 292
G+ +WLFPF DG PP+GW D YL+LP +LVVSQ+I +S Q +DP ++
Sbjct: 270 GLDTWLFPFRDGAPPIGWHDAICYLILPTILVVSQFISQSILSPSSSSKSGQEDDPQNRA 329
Query: 293 SQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
+ L FLP ++G+F+L+V SGL+LYW TNN++ST Q + ++
Sbjct: 330 NGIL-KFLPFLVGWFSLNVSSGLTLYWVTNNIVSTLQTLLIR 370
>gi|308803795|ref|XP_003079210.1| chloroplast membrane protein (ISS) [Ostreococcus tauri]
gi|116057665|emb|CAL53868.1| chloroplast membrane protein (ISS) [Ostreococcus tauri]
Length = 453
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 112/266 (42%), Positives = 170/266 (63%), Gaps = 9/266 (3%)
Query: 76 AAVSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAA 135
AA +S + ++ WL+ ++N +E +L +K + L VPY G AII++T++VK
Sbjct: 43 AAKIASGEIQAPQRMEGWLAPVSNALEDLLFTIKGQLLDLGVPYPTGNAIIIVTILVKMV 102
Query: 136 TFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLA 195
T+PLTK QV SS+ M++L PQ+ AI+E+Y DQER+ E R+Y+ G+NPLAGC P L
Sbjct: 103 TYPLTKDQVVSSLNMKNLQPQIAAIREKYEDDQERMNKEINRVYEENGVNPLAGCGPALL 162
Query: 196 TIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPF-VDGHPPL 254
+ PV GLYRA +N +G E +F++PSLAGPT + +SWL P D PP+
Sbjct: 163 SFPVLAGLYRAFNNAGIDGAFDEPWFFLPSLAGPT------DARDLSWLLPLDADLAPPI 216
Query: 255 GWSDTFAYLVLPVLLVVSQYISVKIIQSSQNND-PNMKSSQALTNFLPLMIGYFALSVPS 313
GW D YL+ P++ +SQ++S+++++ ++ M++ L LP IGY +L+VP+
Sbjct: 217 GWDDASLYLLFPIMTTLSQFVSMEVLKPEEDEKTKEMQNQSVLLKLLPFFIGYISLTVPA 276
Query: 314 GLSLYWFTNNLLSTAQQVWLQKFGGA 339
GL+LYWF NN+ +T QV+L+ GGA
Sbjct: 277 GLALYWFWNNVFTTGIQVYLRN-GGA 301
>gi|299117626|emb|CBN75468.1| Alb3 homolog, thylakoidal inner membrane insertase [Ectocarpus
siliculosus]
Length = 449
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 125/291 (42%), Positives = 174/291 (59%), Gaps = 20/291 (6%)
Query: 97 ITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQ 156
+T V E + L D ++++ VP AYG +II T+ VK TFPLT +Q+ S+ M++L P+
Sbjct: 112 LTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPK 171
Query: 157 VKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLL 216
VK +Q RYA + E +LY+ +NPLAGCLP LA IP++I LYR+L N+A E L
Sbjct: 172 VKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKL 231
Query: 217 TEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYIS 276
TE F WIPSL GPT + +SW+ + DG P LGW DT AY+ +P++LV++Q IS
Sbjct: 232 TESFLWIPSLEGPTFDSPPTE--MMSWIKDWSDGAPKLGWHDTIAYMTIPIILVITQSIS 289
Query: 277 VKIIQ----SSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
+I+Q SQ D + +SQ + FLPLMIG+F+LSVPS L LYW NN +STA V+
Sbjct: 290 TRIMQPAKDPSQPVDESQAASQNIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVF 349
Query: 333 LQKFGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPR 383
++ + I DE D N P ++ E + E +T PR
Sbjct: 350 IR-------------NQIADETGDPNMKAPKITLPFME-EEPEVVTMPIPR 386
>gi|303274404|ref|XP_003056523.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545]
gi|226462607|gb|EEH59899.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545]
Length = 511
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/279 (42%), Positives = 178/279 (63%), Gaps = 11/279 (3%)
Query: 76 AAVSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAA 135
A +S+ +T ++ LS +++++E + + S V Y G +II T +VKA
Sbjct: 102 AELSALTEITGPQRMEGILSPVSDLLEEFVLATQRYFSDAGVRYPLGSSIIFTTFVVKAL 161
Query: 136 TFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLA 195
T+P TK QVES++ M++L PQV A++E+Y DQE++ +E RLY+ ++PLAGC P L
Sbjct: 162 TYPFTKVQVESALNMQNLQPQVNAVREKYRDDQEQMNIEINRLYEDNQVSPLAGCGPLLL 221
Query: 196 TIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGH-PPL 254
T+PV GLYRA +N + +G E +F+IPSLAGPT ++WL P D + PPL
Sbjct: 222 TLPVVWGLYRAFNNASIDGSFDEPWFFIPSLAGPTP------DRSLAWLLPLDDNYQPPL 275
Query: 255 GWSDTFAYLVLPVLLVVSQYISVKIIQSSQN-NDPNMKSSQA---LTNFLPLMIGYFALS 310
GW D YLV+P+L V SQY+S+ I+ ++ NDPN ++ L NFLPL IGY +L+
Sbjct: 276 GWHDASLYLVVPILTVASQYVSMSILSPVKDLNDPNTAETEQQSFLLNFLPLFIGYISLT 335
Query: 311 VPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDI 349
VP+GL+LYW NN+ +TA QV+L++ GGA +++ D+
Sbjct: 336 VPAGLTLYWLFNNIFTTATQVYLRQGGGAVAKVEKIKDV 374
>gi|145346453|ref|XP_001417701.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like
protein [Ostreococcus lucimarinus CCE9901]
gi|144577929|gb|ABO95994.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like
protein [Ostreococcus lucimarinus CCE9901]
Length = 264
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/267 (42%), Positives = 173/267 (64%), Gaps = 9/267 (3%)
Query: 76 AAVSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAA 135
AA +S + ++ WL+ +++ +E +L ++ + L VPY+ G AII++T++VK
Sbjct: 1 AAKIASGEIAAPQRMEGWLAPVSDALEDLLFAIQGQLQGLGVPYSTGNAIIIVTILVKFV 60
Query: 136 TFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLA 195
T+PLT+ QV SS+ M++L PQ+ AI+E+Y DQER+ E R+Y+ G+NPLAGC P L
Sbjct: 61 TYPLTRDQVVSSLNMKNLQPQIAAIREKYEDDQERMNKEINRVYEENGVNPLAGCGPALL 120
Query: 196 TIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPF-VDGHPPL 254
T PV GLYRA +N +G E +F++PSLAGPT + +SWL P D PP+
Sbjct: 121 TFPVLAGLYRAFNNAGIDGAFDEAWFFLPSLAGPT------DARDLSWLLPLDSDYAPPI 174
Query: 255 GWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPN-MKSSQALTNFLPLMIGYFALSVPS 313
GW + YL+ PVL +SQ++S+++++ + + MK+ L LPL IGY +L+VP+
Sbjct: 175 GWEEASLYLIFPVLTTISQFVSMEVLKPEETEKTDEMKNQSVLLKLLPLFIGYISLTVPA 234
Query: 314 GLSLYWFTNNLLSTAQQVWLQKFGGAK 340
GL+LYWF NN+ +T QV+L+ GGAK
Sbjct: 235 GLALYWFWNNVFTTGIQVFLRN-GGAK 260
>gi|412988798|emb|CCO15389.1| predicted protein [Bathycoccus prasinos]
Length = 639
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 169/280 (60%), Gaps = 10/280 (3%)
Query: 75 DAAVSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKA 134
+A ++S + V + + + E +L ++D L +PY G +II+LT +VK
Sbjct: 190 EAKIASGEIVEPQRTEGGVFGLLADSFEKLLLQIQDVEKALGIPYPVGNSIIILTALVKL 249
Query: 135 ATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTL 194
TFPLTK QV SS+ M++L PQV AI+E+Y D ER+ E R+Y+ +NPLAGC P +
Sbjct: 250 VTFPLTKSQVVSSLNMKNLQPQVAAIKEKYEDDPERMNSEINRIYEENEVNPLAGCGPLI 309
Query: 195 ATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGH-PP 253
T+PV+IGLYRA N +G+ E + +IP+L+GP+ + ISWL+P D PP
Sbjct: 310 LTLPVFIGLYRAFKNAGIDGVFDEPWLFIPNLSGPS------DAQDISWLWPLDDDFAPP 363
Query: 254 L--GWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPN-MKSSQALTNFLPLMIGYFALS 310
L GW + YLV+P+L +Q+ S+ +Q + + MK+ L FLP IGY +L+
Sbjct: 364 LDGGWEAAWPYLVMPILTTATQFYSMNAMQPKEEEKTDEMKNQSQLVKFLPFFIGYISLT 423
Query: 311 VPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDII 350
VP+GL++YW NN+ +T QV+L+ FGGA ++ DI+
Sbjct: 424 VPAGLAMYWLFNNVFTTLTQVYLRNFGGAVATVEAPDDIL 463
>gi|422293337|gb|EKU20637.1| preprotein translocase subunit YidC [Nannochloropsis gaditana
CCMP526]
Length = 485
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/240 (43%), Positives = 152/240 (63%), Gaps = 3/240 (1%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
WL+ +E + + + + + YG +II TV+VK T PL KQ+ES+ M++
Sbjct: 109 WLAAPIGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQA 168
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
+ P++K IQ +Y D Q + A+LY +NPLAGCLP L IP++I LYRAL+N+A
Sbjct: 169 IQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAA 228
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
L E F W+P+L GPT A + G++WL + P LGW DT A+L +P++L+VS
Sbjct: 229 ANELNEPFLWLPNLEGPTYGAGPAD--GMNWLKQWEGFTPSLGWHDTIAFLTVPLILIVS 286
Query: 273 QYISVKIIQSSQN-NDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
Q IS +I+Q + N +DPN + SQA+ FLP M+GYF+L+VPSGL +YW NNL++T V
Sbjct: 287 QSISQQILQPAANKDDPNAQQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTV 346
>gi|224001688|ref|XP_002290516.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973938|gb|EED92268.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 446
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/266 (40%), Positives = 175/266 (65%), Gaps = 9/266 (3%)
Query: 75 DAAVSSSDAVTTTKQNSD----WLSGITNVMETVLKVLKDGMSTLHVPY-AYGFAIILLT 129
+A ++ +AVT + + + W +T +E +LK++ G+ ++ + A+G +II +T
Sbjct: 89 EATKAAIEAVTASSADPNAQNGWFGFLTLPIEGLLKLIHGGLDSMGMSSNAWGISIIAMT 148
Query: 130 VIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAG 189
V++KA TFPLTK Q+ES+ M++L P +K++Q +Y + E + + A +Y+ +NPLAG
Sbjct: 149 VVIKALTFPLTKSQLESTNKMQALQPTIKSLQAKYQSNPEVMNQKIAEVYQTNEVNPLAG 208
Query: 190 CLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFP-FV 248
C+P+L IPV+IGLYRA+ N+A E L E F ++P+L GPT A +GS WLF +V
Sbjct: 209 CIPSLVQIPVFIGLYRAVLNLAKENALDEPFLFLPNLEGPTYGADPAHGS--DWLFKNWV 266
Query: 249 DGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFA 308
DG P LGW DT A+L +PV L +SQ IS+ ++Q + +DP + + + LP MIG+FA
Sbjct: 267 DGVPGLGWEDTIAFLSIPVFLTISQVISMNMMQ-PKTDDPQQQQANVILKVLPFMIGWFA 325
Query: 309 LSVPSGLSLYWFTNNLLSTAQQVWLQ 334
L+VP+ L +YW NN+++TA ++++
Sbjct: 326 LNVPAALGVYWVVNNIVTTATTLYVR 351
>gi|422294128|gb|EKU21428.1| preprotein translocase subunit YidC, partial [Nannochloropsis
gaditana CCMP526]
Length = 236
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 141/212 (66%), Gaps = 3/212 (1%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG +II TV+VK T PL KQ+ES+ M+++ P++K IQ +Y D Q + A+LY
Sbjct: 14 YGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYS 73
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPLAGCLP L IP++I LYRAL+N+A L E F W+P+L GPT A G
Sbjct: 74 DNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGP--ADG 131
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQN-NDPNMKSSQALTNF 299
++WL + P LGW DT A+L +P++L+VSQ IS +I+Q + N +DPN + SQA+ F
Sbjct: 132 MNWLKQWEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDPNAQQSQAILKF 191
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
LP M+GYF+L+VPSGL +YW NNL++T V
Sbjct: 192 LPFMVGYFSLNVPSGLGVYWIANNLITTLTTV 223
>gi|323452174|gb|EGB08049.1| hypothetical protein AURANDRAFT_11603 [Aureococcus anophagefferens]
Length = 219
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/221 (46%), Positives = 151/221 (68%), Gaps = 11/221 (4%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YG AI+L T+++KA TFPL +Q+ES+ M++L P +K IQ +YA D +++ + A LY
Sbjct: 5 SYGVAIVLFTLLLKAVTFPLNYQQIESTTKMQALQPAIKRIQAKYAADPQQMNIMMAELY 64
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+ +NPLAGCLP L IP++I LYR+L ++A E LL E F WIP+L GP + QN
Sbjct: 65 QENELNPLAGCLPALVQIPIFIALYRSLLSLAKEDLLEESFLWIPNLEGP--VYGAQNA- 121
Query: 240 GISWLFPFVDGH---PPLGWSDTFAYLVLPVLLVVSQYISVKIIQ--SSQNNDPNMKSSQ 294
WLF F + PPLGW DT AYL LP LLVV+Q S ++Q + NN+ S+Q
Sbjct: 122 --DWLFKFDQWNGAIPPLGWHDTVAYLALPCLLVVAQSASTTLLQPPADPNNEAAQTSNQ 179
Query: 295 ALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
L +LPLM+G+F+L+VP+GL++YWF NN+++TA +++++
Sbjct: 180 VL-KYLPLMVGFFSLNVPAGLTIYWFCNNIITTASTLYIRQ 219
>gi|219112651|ref|XP_002178077.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410962|gb|EEC50891.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 425
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 161/242 (66%), Gaps = 5/242 (2%)
Query: 88 KQNSDWLSGITNVMETVLKVLKDGMSTLHV-PYAYGFAIILLTVIVKAATFPLTKKQVES 146
+ +S W +T ++ +L+ + + T+ + ++G AI+LLT+++K TFPLTK Q+ES
Sbjct: 90 ESDSGWFGFLTIPIKLLLQAIHSLLLTVGLNTNSWGVAIVLLTILIKVVTFPLTKTQLES 149
Query: 147 SMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRA 206
+ M+++ P +K +Q +Y + E + + A Y+ INPLAGCLP++ IPV+IGLYRA
Sbjct: 150 TNKMQAMQPAIKELQAKYQSNPEVMNQKIAEFYQTNEINPLAGCLPSIVQIPVFIGLYRA 209
Query: 207 LSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFP-FVDGHPPLGWSDTFAYLVL 265
+ +A L E F ++P+L GPT A + GS W+ + DG P LGW DT A+L+L
Sbjct: 210 VLELAQANKLDESFLFLPNLEGPTYGA--EPGSAADWILKGWTDGVPSLGWPDTIAFLIL 267
Query: 266 PVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLL 325
PV LV+SQY+S++++Q + +DP + S A+ LP+MIG+F+LSVP+ LS+YW NN++
Sbjct: 268 PVFLVISQYLSMELMQ-PKTDDPAQQQSNAILKVLPIMIGWFSLSVPAALSVYWVINNII 326
Query: 326 ST 327
+T
Sbjct: 327 TT 328
>gi|323455292|gb|EGB11161.1| hypothetical protein AURANDRAFT_22501 [Aureococcus anophagefferens]
Length = 366
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 107/263 (40%), Positives = 163/263 (61%), Gaps = 12/263 (4%)
Query: 86 TTKQNSDWLSGITNVMETVLKVLKDGMST-LHVPY-AYGFAIILLTVIVKAATFPLTKKQ 143
T +++ W + N ++ ++ L DG+ L + ++G +IIL T ++ +PL
Sbjct: 31 TCVEDASWWCTVQNGVQGAIEGLHDGIHDGLGIKQNSWGISIILFTAFLRTVIYPLNFIS 90
Query: 144 VESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGL 203
ES+ ++L P + I++RY DQ+ + L TA+LY++ NPLAGCLP +A IPV+I L
Sbjct: 91 YESTERNKALKPYMDKIKDRYGEDQQAVNLATAKLYEMTETNPLAGCLPAIAQIPVFIAL 150
Query: 204 YRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFP-FVDGHPPLGWSDTFAY 262
YR++ N+A + + EGFF++P+L GPT NG GI WL +VDG P LGW DT A+
Sbjct: 151 YRSVLNLAFDQKIGEGFFFVPNLEGPT----YDNGRGIQWLTDNWVDGVPSLGWHDTLAF 206
Query: 263 LVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQ---ALTNFLPLMIGYFALSVPSGLSLYW 319
L LPV LV++Q IS++++ DPN KS+Q + +LPLMIG+F+ +VPSGL LYW
Sbjct: 207 LALPVALVITQSISMRVLTPPP--DPNDKSAQNANRVLKYLPLMIGWFSANVPSGLGLYW 264
Query: 320 FTNNLLSTAQQVWLQKFGGAKDP 342
T+N+ S A + + + A P
Sbjct: 265 MTSNVFSVAGSLGAKAYLKANPP 287
>gi|397614204|gb|EJK62657.1| hypothetical protein THAOC_16722 [Thalassiosira oceanica]
Length = 302
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 145/215 (67%), Gaps = 4/215 (1%)
Query: 128 LTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPL 187
+TV++K TFPLTK Q+ES+ M++L P +K +Q +Y + E + + A +Y+ +NPL
Sbjct: 1 MTVVIKLLTFPLTKSQLESTNKMQALQPTIKGLQAKYQSNPEVMNQKIAEVYQTNDVNPL 60
Query: 188 AGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFP- 246
AGC+P+L IPV+IGLYR++ N+A E L E F ++P+L GPT A +GS W+
Sbjct: 61 AGCIPSLVQIPVFIGLYRSVLNLAKENALDEPFLFLPNLEGPTYGADPAHGS--DWILKN 118
Query: 247 FVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGY 306
+VDG P LGW DT A+L +P+ LV+SQ++S+ ++Q +++DP + + + LP M+G+
Sbjct: 119 WVDGVPSLGWEDTIAFLSIPIFLVISQFVSMNLMQ-PKSDDPQQQQANIILKVLPFMVGW 177
Query: 307 FALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKD 341
FAL+VPS L +YW NN+++TA ++++ A D
Sbjct: 178 FALNVPSALGIYWVVNNVVTTATTLYIRNSMPAMD 212
>gi|219120081|ref|XP_002180787.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407503|gb|EEC47439.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 467
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/412 (31%), Positives = 214/412 (51%), Gaps = 41/412 (9%)
Query: 51 PDPNSADGVKELL-GVAER--LLFTLADAAVSSSDAVTTTKQNSD---WLSGITNVMETV 104
P P + V L G+ ++ L T+ +A +DA T SD W + +T
Sbjct: 60 PSPEYWESVATTLDGLVQQSAALATVHSSAQVLADAAGTAAPPSDDGGWWGAYIQLFKTT 119
Query: 105 L----KVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAI 160
L ++ + + + ++G +I + T IV+ PL+ +Q +S+ ++SL P V I
Sbjct: 120 LNAVHSTIQGPLQNVGIEQSWGVSIAIFTTIVRTLLVPLSIEQSKSAEYIKSLKPYVADI 179
Query: 161 QERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF 220
+ +Y +QE TA+LY+ A NPLAGC L +PV++GLYR + +A +G+L E F
Sbjct: 180 KAKYKNNQEAQNRATAKLYEDAQQNPLAGCFVALIQLPVFLGLYRGVRLLAMDGVLEEPF 239
Query: 221 FWIPSLAGPTTIAARQNGSGISWLFP-FVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKI 279
WIPSL GP A N G+ WL +V+G P LGW T A+L++PV+LVV Q +++++
Sbjct: 240 LWIPSLEGPV---APPNFQGLDWLVQGWVNGAPALGWETTLAFLIMPVILVVLQSVTMQV 296
Query: 280 IQSSQNNDP------NMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
+Q + D ++ SQ + FLPL+IG+FAL VP+GL++YWFT+N+ + Q + +
Sbjct: 297 LQPPVDEDATKEERETLERSQTILKFLPLLIGFFALQVPAGLTIYWFTSNIFTLTQSLAV 356
Query: 334 QKFGGAKDPMKQFSDI----IKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEKFK 389
+ + A P + D +K+E + + T ++ R+A T G R G F
Sbjct: 357 RAYFSANPPQIELPDYWDTALKNENFE--------NMTPEDRRKA---TEAGIRVGPSFD 405
Query: 390 QIREQE-----ARRRQQREE-EKRKAAEAAAKGNQTINGEQEREASILGSAK 435
+ ++ RR REE E K + +Q + +E A + SA+
Sbjct: 406 DLVDESRFHCLIERRPIREETEAWKRVTQLRQESQAVELPEELSAWVQASAQ 457
>gi|223995523|ref|XP_002287435.1| chloroplast membrane protein [Thalassiosira pseudonana CCMP1335]
gi|220976551|gb|EED94878.1| chloroplast membrane protein [Thalassiosira pseudonana CCMP1335]
Length = 407
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/333 (33%), Positives = 184/333 (55%), Gaps = 32/333 (9%)
Query: 102 ETVLKVLKDGMSTLH------------VPYAYGFAIILLTVIVKAATFPLTKKQVESSMA 149
E+ +++ K+G++ +H +G +I L T V+A P + +Q +SS
Sbjct: 59 ESYIQIYKNGLAFVHDNIVDEPLRKLGFDQTWGVSIFLFTAGVRALLVPFSIQQSKSSEY 118
Query: 150 MRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSN 209
M++L P + I+E+Y D+ ++L++ A NPLAGC+ + A IP+++GLYR+++
Sbjct: 119 MKALKPYQQKIKEKYT-DKNMQNRAISKLFEDAQANPLAGCVTSFAQIPIFLGLYRSVTR 177
Query: 210 VADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFP-FVDGHPPLGWSDTFAYLVLPVL 268
+A EG L E F WIPSL GP T A N G WL +VDG PPL W T A+ V+PVL
Sbjct: 178 LAQEGRLDEPFLWIPSLQGPVT--AETNYRGTEWLTQGWVDGVPPLSWETTLAFCVMPVL 235
Query: 269 LVVSQYISVKIIQSSQNNDPN------MKSSQALTNFLPLMIGYFALSVPSGLSLYWFTN 322
LV+ Q ++ ++Q ++ + M+S++ + FLPLMIG+F+L VP+GL++YWFT+
Sbjct: 236 LVLGQSFTMNVLQQPDDDSQDEETKKQMESTKTILKFLPLMIGFFSLQVPAGLTIYWFTS 295
Query: 323 NLLSTAQQVWLQKFGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGP 382
NL + +Q + ++ + A P + D LD L++ +K A L+T
Sbjct: 296 NLFTVSQSLIIRGYYAANPPEVKLPDYWG--ALDKGDE---LTADEKRAAAMAGLST--- 347
Query: 383 RPGEKFKQIREQEARRRQQREEEKRKAAEAAAK 415
G F Q+ E+ + + R+ +EA ++
Sbjct: 348 --GPTFDQLMEEAKFHYVVKRDPIRENSEAWSR 378
>gi|32307520|gb|AAP79165.1| plastid membrane protein albino 3 [Bigelowiella natans]
Length = 440
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 181/350 (51%), Gaps = 38/350 (10%)
Query: 65 VAERLLFTLADAAVSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFA 124
+ +L +LADA V+ +++ ++ + + + + + V + G +
Sbjct: 101 ITPQLFASLADAV----QVVSEQEKSVGPFGQFVKLIAGTILFMSNSLQKVGVEQSIGLS 156
Query: 125 IILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGI 184
I+L TV VK TFPL ++Q++ + M + P++K IQ +Y D + + +Y +
Sbjct: 157 IVLFTVFVKLLTFPLNEQQIKGTERMGIIQPKIKEIQAKYKDDPNKSAEKLQSVYAENQV 216
Query: 185 NPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWL 244
NPLAG LP A IP++I LYRAL N+A +G + + F W+P+L GPT G +WL
Sbjct: 217 NPLAGLLPAFAQIPIFIALYRALQNLATDGQMNQPFLWLPNLEGPTF-----GPIGTNWL 271
Query: 245 FP-FVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLM 303
F F DG P GW DT AYL LP+ L+ SQ +S +++ S + D + T FLP++
Sbjct: 272 FTGFHDGVPQYGWHDTAAYLSLPIFLIFSQIVSQRLLVSKEQYD----AQPQWTKFLPII 327
Query: 304 IGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAKDPMKQFSDIIKDERLDINKSVP 362
GYF+L+VPSGL++YW NN+++T + L QKF K+ P
Sbjct: 328 FGYFSLNVPSGLAVYWVANNIVTTGTNIALKQKF----------------------KNDP 365
Query: 363 GLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRRQQREEEKRKAAEA 412
+ + ++ + + E P+P K K+I E+ A E+ ++ A +
Sbjct: 366 EVVALRERISKVDA-PVEKPKPYVKPKEIVEESATVGMASEQSQQPVASS 414
>gi|397643408|gb|EJK75844.1| hypothetical protein THAOC_02424 [Thalassiosira oceanica]
Length = 407
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 187/342 (54%), Gaps = 33/342 (9%)
Query: 100 VMETVLKVLKDGMSTLH-----------VPYAYGFAIILLTVIVKAATFPLTKKQVESSM 148
+ E +++ K+G++ +H +G +I L T V+A P + Q +S+
Sbjct: 46 LWEKYIQIYKNGLALVHDTIDGPLRDAGFTQTWGISIALFTAGVRALLIPFSISQNKSTE 105
Query: 149 AMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALS 208
++L P K I+E+Y+ D+ ++LY+ A NPLAGC+ + A IP+++GLYR+++
Sbjct: 106 YSKALKPYQKKIKEKYS-DKNMQNRAISKLYEDAEQNPLAGCITSFAQIPIFLGLYRSVT 164
Query: 209 NVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFP-FVDGHPPLGWSDTFAYLVLPV 267
+A E L E F WIPSL GP ++A N G+ WL + +G P +GW T +L++PV
Sbjct: 165 RLAAESRLDEPFLWIPSLEGP--VSAENNYRGMQWLTEGWSNGAPSMGWEGTLPFLIMPV 222
Query: 268 LLVVSQYISVKIIQ------SSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFT 321
+LV+ Q I+++++Q +S+ ++ ++++ FLPLMIG+F+L VP+GL++YWFT
Sbjct: 223 VLVIMQSITMQLLQQPDDESASEEEKEQLERTKSILKFLPLMIGFFSLQVPAGLTIYWFT 282
Query: 322 NNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEG 381
+NL + +Q + ++ + A P + D E LD K + T E R+A G
Sbjct: 283 SNLFTVSQSLAIRAYYAANPPKIELPDYW--EALDDKKEL-----TADERREA---AMAG 332
Query: 382 PRPGEKFKQIREQEARRRQQREEEKRKAAEAAAK--GNQTIN 421
G F ++ ++ + R +EA ++ G+ +N
Sbjct: 333 LSTGPTFDELMDEAKFHYVVQRGPLRAESEAWSRVEGSDNVN 374
>gi|428165483|gb|EKX34476.1| hypothetical protein GUITHDRAFT_90472 [Guillardia theta CCMP2712]
Length = 328
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 127/206 (61%), Gaps = 4/206 (1%)
Query: 86 TTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVE 145
TT+ N++ T L L + +P A+G+AI T+ VKA T+PL KQ+
Sbjct: 107 TTEDKPGVFGSFVNLIVTCLTALHTAFKSAGIPGAWGYAIATFTIFVKAVTYPLNFKQMS 166
Query: 146 SSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYR 205
S++A++ L P+VKAIQ RYA D + + A LY+ +NPLAGCLPTL IPV+IGLYR
Sbjct: 167 STIALQQLQPKVKAIQSRYANDPQTQNEKIAELYRTENVNPLAGCLPTLIQIPVFIGLYR 226
Query: 206 ALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGI---SWLFP-FVDGHPPLGWSDTFA 261
++ +A + LL E F WIPSL GP + G I +WLF + +GHP LGW T A
Sbjct: 227 SVLQLAQKDLLEESFLWIPSLQGPVGEYNAKTGLPIDATAWLFKGWTEGHPALGWDGTLA 286
Query: 262 YLVLPVLLVVSQYISVKIIQSSQNND 287
YL LP++LV++Q +S KI+Q ++ D
Sbjct: 287 YLSLPIILVITQTLSQKILQVNKTQD 312
>gi|383761382|ref|YP_005440364.1| hypothetical protein CLDAP_04270 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381381650|dbj|BAL98466.1| hypothetical protein CLDAP_04270 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 318
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 98/253 (38%), Positives = 138/253 (54%), Gaps = 10/253 (3%)
Query: 84 VTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQ 143
VT T W + + + +L L + + +PY++G++IIL T+I+K TFPL Q
Sbjct: 13 VTATPPEGFWQTFVVWPLANILIGLDSMLEGMGIPYSWGWSIILFTLIIKIVTFPLNLSQ 72
Query: 144 VESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGL 203
+ A + L P + +Q++Y D+ER+ E +LYK AG+NPL+GCLP L +P+ GL
Sbjct: 73 IRGMQAQKELQPLLAELQKKYGKDRERLAQEQMKLYKEAGVNPLSGCLPLLIQMPILFGL 132
Query: 204 YRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYL 263
Y AL V L GFFWIP L+ P G+SW+ D + AY
Sbjct: 133 YAALVAVGPM-LKDSGFFWIPDLSFPNF------ELGLSWI---ADLWSAGEYGRLLAYF 182
Query: 264 VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNN 323
VLPVLL+VSQ K + S + K Q ++ F+ L GYF L VP+GLSLYW T+N
Sbjct: 183 VLPVLLIVSQIFMQKWMTPSTGDSEQAKMMQNMSLFMTLFFGYFTLQVPAGLSLYWVTSN 242
Query: 324 LLSTAQQVWLQKF 336
LL QQ + +F
Sbjct: 243 LLQILQQWAVTRF 255
>gi|428175891|gb|EKX44778.1| hypothetical protein GUITHDRAFT_87257 [Guillardia theta CCMP2712]
Length = 402
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 137/224 (61%), Gaps = 10/224 (4%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++I + +++KA T+PL K + M+++ P++ I+E+Y + + I + T+ L+
Sbjct: 47 YGWSITAIVLMIKALTYPLNYKVYAAQFEMQAIQPEIDKIKEQYKDNPDLINMRTSVLFA 106
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPLAGCLP L P++I LYR L N+ + +L E F ++PSL GP + G
Sbjct: 107 EKEVNPLAGCLPILIQFPIFIALYRTLLNLGKDRMLGEPFLFLPSLEGPVVAGLPTDYVG 166
Query: 241 IS----WLFP-FVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQ-NNDPNMK--- 291
+ WL + +G PPLGW DT Y LP+L+VV+Q +S I ++ Q P+ +
Sbjct: 167 VREDAPWLLQNWQNGAPPLGWHDTIIYCALPILIVVAQLVSTSITKAGQPAKKPSEQKGD 226
Query: 292 -SSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
S++ L LP +IG+FAL++P+G SLYWF N +L+TA QV+++
Sbjct: 227 GSAETLVAILPYLIGWFALNLPAGCSLYWFLNTVLTTAIQVYIK 270
>gi|110740108|dbj|BAF01955.1| chloroplast membrane protein [Arabidopsis thaliana]
Length = 201
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/164 (51%), Positives = 111/164 (67%), Gaps = 18/164 (10%)
Query: 243 WLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPL 302
WLFPFVDGHPPLGW DT AYLVLPVLL+ SQY+S++I++ Q +DP K++ + FLPL
Sbjct: 1 WLFPFVDGHPPLGWYDTVAYLVLPVLLIASQYVSMEIMKPPQTDDPAQKNTLLVFKFLPL 60
Query: 303 MIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDERLDINKSVP 362
MIGYFALSVPSGLS+YW TNN+LSTAQQV+L+K GGAK M DE
Sbjct: 61 MIGYFALSVPSGLSIYWLTNNVLSTAQQVYLRKLGGAKPNM--------DEN-------- 104
Query: 363 GLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRRQQREEEK 406
+S A +A++ + GE+F+Q++EQE R ++ + K
Sbjct: 105 --ASKIISAGRAKRSIAQPDDAGERFRQLKEQEKRSKKNKAVAK 146
>gi|323446883|gb|EGB02892.1| hypothetical protein AURANDRAFT_16967 [Aureococcus anophagefferens]
Length = 196
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 133/218 (61%), Gaps = 33/218 (15%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YG AI+L T+++KA TFPL +Q+ES+ M++L P +K IQ +YA D +++ + A LY
Sbjct: 10 SYGVAIVLFTLLLKAVTFPLNYQQIESTTKMQALQPAIKRIQAKYAADPQQMNIMMAELY 69
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+ +NPLAGCLP L IP++I LYR+L ++A E LL E F WIP+L GP + QN
Sbjct: 70 QENELNPLAGCLPALVQIPIFIALYRSLLSLAKEDLLEESFLWIPNLEGP--VYGAQNA- 126
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQ--SSQNNDPNMKSSQALT 297
WLF F + S ++Q + NN+ S+Q L
Sbjct: 127 --DWLFKF-------------------------DHASTTLLQPPADPNNEAAQTSNQVL- 158
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+LPLM+G+F+L+VP+GL++YWF NN+++TA +++++
Sbjct: 159 KYLPLMVGFFSLNVPAGLTIYWFCNNIITTASTLYIRQ 196
>gi|408792016|ref|ZP_11203626.1| 60Kd inner membrane protein [Leptospira meyeri serovar Hardjo str.
Went 5]
gi|408463426|gb|EKJ87151.1| 60Kd inner membrane protein [Leptospira meyeri serovar Hardjo str.
Went 5]
Length = 628
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 153/297 (51%), Gaps = 51/297 (17%)
Query: 58 GVKELLGVAER------------LLFTLADAAVSS-SDAVTTTKQNSDWLSGITNVMETV 104
GV+EL G A R + L+D+ S + +TT +N GI +++ +
Sbjct: 340 GVRELDGTAFRDSKLDPKINKDSVFAGLSDSLDKSFNQGITTPLRN-----GIVWILKKI 394
Query: 105 LKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERY 164
V+ + YG+AI++ ++ K A +PL KKQ ES M+ L+PQ+K I E+Y
Sbjct: 395 YLVIPN----------YGWAIVIFAILFKLAFYPLNKKQAESMKKMQELSPQIKLINEKY 444
Query: 165 AGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIP 224
A D + Q +T LYK G NP+AGCLP L IP++I LY A S+ D L F WI
Sbjct: 445 ADDPKLKQEKTVELYKKNGTNPMAGCLPMLIQIPIFIALYTAFSDTVD--LWNSPFLWIK 502
Query: 225 SLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQ 284
L+ P T+ P L + A +LP+++V +Q + ++ S
Sbjct: 503 DLSEPDTVYTT----------------PKLAFIGALAINILPLIMVATQVVQSRMTTVS- 545
Query: 285 NNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKD 341
+DPN K + P+++ YF S+P+G+++YW N+LS AQQV+ KFG ++D
Sbjct: 546 -SDPNQKMMMYMM---PVIMLYFFWSMPAGVTMYWTMQNILSIAQQVYTNKFGKSED 598
>gi|183219716|ref|YP_001837712.1| inner membrane protein OxaA [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909851|ref|YP_001961406.1| preprotein translocase subunit YidC [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167774527|gb|ABZ92828.1| Preprotein translocase, YidC subunit [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167778138|gb|ABZ96436.1| Inner membrane protein OxaA; putative membrane protein [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
Length = 649
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 150/298 (50%), Gaps = 53/298 (17%)
Query: 58 GVKELLGVAERLLFTLADAAVSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMST--- 114
GV+EL G A R D+ K N+D S + E++ K G++T
Sbjct: 361 GVRELDGTAFR-------------DSKLDPKINND--SVFAGLSESLDKSFNQGITTPLR 405
Query: 115 -----------LHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQER 163
L +P YG+AI++ ++ K A +PL KKQ ES M+ L+PQ+K I E+
Sbjct: 406 NGIVWILKKIYLVIP-NYGWAIVIFAILFKLAFYPLNKKQAESMKKMQELSPQIKLINEK 464
Query: 164 YAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWI 223
YA D + Q +T LYK G NP+AGCLP L IP++I LY A S+ D L F WI
Sbjct: 465 YADDPKLKQEKTIELYKKNGTNPMAGCLPMLIQIPIFIALYTAFSDTVD--LWNSPFLWI 522
Query: 224 PSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSS 283
L+ P T+ P L + T A +LP+++V +Q + K+ S
Sbjct: 523 KDLSEPDTVFTT----------------PKLAFIGTLAINILPLIMVATQVVQSKMTTVS 566
Query: 284 QNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKD 341
DPN K + P+++ YF S+P+G+++YW N+LS AQQV+ KF ++D
Sbjct: 567 --TDPNQKMMMYMM---PVIMLYFFWSMPAGVTMYWTMQNILSIAQQVYTNKFVKSED 619
>gi|339498652|ref|YP_004696687.1| membrane protein oxaA [Spirochaeta caldaria DSM 7334]
gi|338833001|gb|AEJ18179.1| Membrane protein oxaA [Spirochaeta caldaria DSM 7334]
Length = 605
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/315 (34%), Positives = 163/315 (51%), Gaps = 41/315 (13%)
Query: 28 TRTHFGLKPFLRGSIC--VAKFGLRPDPNSADGVKELLGVAERLLFTLADAAVSSSDAVT 85
T + ++P L GS V +F L P A + V+++ F L++ ++ AV
Sbjct: 303 TSRFYIIRPSLNGSRTTDVLRFYLGPKTQKALSAYD---VSDKNAFKLSNMNMT---AVA 356
Query: 86 TTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVE 145
T SGI +ETVLK + +P YG AIILLT++VK A FPLTKK E
Sbjct: 357 NT-------SGILGPVETVLKWFMIIFYKI-IP-NYGIAIILLTILVKLAMFPLTKKGSE 407
Query: 146 SSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYR 205
S++ M+ LAP++K IQ++Y + ++ E A LYK G NP+AGCLP L IP++ +Y
Sbjct: 408 STIRMQELAPKIKEIQDKYKDNPTKMNTEMAELYKKEGYNPMAGCLPMLLQIPIFFAMYN 467
Query: 206 ALSNVAD--EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPP-LGWSDTFAY 262
+N D + G WIP L+ P ++ F F P L WSD
Sbjct: 468 LFNNHFDLRGAMFIPG--WIPDLSLPESV------------FSFAPYKIPLLNWSDI--- 510
Query: 263 LVLPVLLVVSQYISVKIIQS-SQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFT 321
+LP + +VSQ + K+ Q+ Q N+ MK + +P+M + VPSGL +YW
Sbjct: 511 RLLPFIYLVSQLLYGKVTQTPDQQNNSQMK---MMLYVMPIMFFFILYDVPSGLLVYWIM 567
Query: 322 NNLLSTAQQVWLQKF 336
+N+L+ QQ+ + ++
Sbjct: 568 SNMLTLVQQMIINRY 582
>gi|298709029|emb|CBJ30979.1| Alb3 homolog, thylakoidal inner membrane insertase [Ectocarpus
siliculosus]
Length = 342
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 127/229 (55%), Gaps = 5/229 (2%)
Query: 68 RLLFTLADAAVSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIIL 127
++ L+DAA +AV + + + + + + + + + + ++G AI+
Sbjct: 78 HVMHGLSDAAAVPLEAVEEEAKGPNPFNMWIEFIRSSVLGINEFYKGIGIEQSFGLAIVT 137
Query: 128 LTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPL 187
T+ VK PL Q++SS M+ L P VK I ++ ++E T RLY +NPL
Sbjct: 138 FTLGVKTLLVPLQAIQLQSSEKMKVLQPTVKEINAKFGQNKEAATAATNRLYAETKVNPL 197
Query: 188 AGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPF 247
GCLP L PV+IGLYRA+ + + +EGF W+PSL GPT +NG GI WL F
Sbjct: 198 IGCLPALLQFPVFIGLYRAIIGFGTDAVASEGFLWLPSLQGPT----FENGRGIGWLTTF 253
Query: 248 VDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
VDGHP LGW DT Y+ +P +LV+SQ +S+ ++ + ++ P+ + +L
Sbjct: 254 VDGHPILGWHDTLCYMSIPAILVLSQKLSMTLL-TPPDDGPDDATGSSL 301
>gi|427406676|ref|ZP_18896881.1| YidC/Oxa1 family membrane protein insertase [Selenomonas sp. F0473]
gi|425708106|gb|EKU71147.1| YidC/Oxa1 family membrane protein insertase [Selenomonas sp. F0473]
Length = 225
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 122/226 (53%), Gaps = 37/226 (16%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YGF IILLTV++K T+PLT KQV+S AM+ + P++K IQE+Y D +Q +T L+
Sbjct: 34 SYGFPIILLTVLIKLVTYPLTVKQVKSMKAMQEIQPKMKKIQEKYKNDPRMLQQKTGELF 93
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+ AG+NPLAGCLP L +P+ +G+Y AL N A E F W+P L+ P +
Sbjct: 94 RAAGVNPLAGCLPLLVQMPILMGMYYALFNFAYPSEAAEAFLWLPHLSAPDPLY------ 147
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
+LPVL ++ ++ K+ + N + +
Sbjct: 148 ------------------------ILPVLSALTTFLQQKMTSTEMNQQ-----MKIMMTV 178
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQ 345
+PL IG+ +L+ P+GL LYW T N++ AQQ W+ + G + P K+
Sbjct: 179 MPLFIGWISLNFPAGLVLYWVTMNIVQIAQQWWMYR--GEEKPAKK 222
>gi|357058356|ref|ZP_09119210.1| hypothetical protein HMPREF9334_00927 [Selenomonas infelix ATCC
43532]
gi|355374209|gb|EHG21510.1| hypothetical protein HMPREF9334_00927 [Selenomonas infelix ATCC
43532]
Length = 224
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 121/216 (56%), Gaps = 35/216 (16%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YGF IILLT+++K T+PLT KQ++S AM+ + P++K IQE+Y + + +Q +T L+
Sbjct: 34 SYGFPIILLTILIKVVTYPLTVKQIKSMKAMQEIQPKMKKIQEKYKSNPQMLQQKTGELF 93
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+ AG+NPLAGCLP L +P+ +G+Y AL N FFW+P+++ P
Sbjct: 94 REAGVNPLAGCLPLLVQMPILMGMYYALFNFTFPSAEAAAFFWLPNMSEPD--------- 144
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
PL +LPVL + Y+ K+ +S +P MK +
Sbjct: 145 -------------PL--------YILPVLSAATTYLQQKM--TSTEMNPQMK---IMMTI 178
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+PL IG+ +L+ PSGL LYW T N++ AQQ W+ +
Sbjct: 179 MPLFIGWISLTFPSGLVLYWVTMNVVQIAQQWWMYR 214
>gi|333999779|ref|YP_004532391.1| inner membrane protein OxaA [Treponema primitia ZAS-2]
gi|333741513|gb|AEF87003.1| inner membrane protein OxaA [Treponema primitia ZAS-2]
Length = 600
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 134/245 (54%), Gaps = 25/245 (10%)
Query: 95 SGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLA 154
SG +E++LK L M + YG AIILLT++VKA FPLTKK ES++ M+SL+
Sbjct: 350 SGFLGPLESLLKWLL--MLFYRIIPNYGAAIILLTILVKAIMFPLTKKGSESTLRMQSLS 407
Query: 155 PQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD-- 212
P++K IQ++Y + +++ E LYK G NPL+GCLP + +P++ +Y + D
Sbjct: 408 PKIKEIQDKYKDNPQKMNAEMGELYKKEGYNPLSGCLPMIIQLPIFFAMYNLFNTHFDLR 467
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
+ G WIP L+ P +I W PF P LGWS+ VLP L V S
Sbjct: 468 GAMFIPG--WIPDLSLPESI----------WTMPF--KVPLLGWSNL---RVLPFLYVGS 510
Query: 273 QYISVKIIQS-SQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
Q + K+ Q+ Q + MK + +P+M + VPSGL LYW +N+L+ QQ+
Sbjct: 511 QLLYGKVTQTPDQQGNAQMK---MMLYVMPIMFFFILYDVPSGLLLYWIMSNVLTMVQQL 567
Query: 332 WLQKF 336
+ K+
Sbjct: 568 TINKY 572
>gi|414154095|ref|ZP_11410415.1| Membrane protein insertase, YidC/Oxa1 family [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411454280|emb|CCO08319.1| Membrane protein insertase, YidC/Oxa1 family [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 230
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 130/244 (53%), Gaps = 37/244 (15%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W I N M ++ L + + VP +Y AIILLTVI+K A +PL+KKQ+ S + M+
Sbjct: 4 WFDAIVNGMTALMNWLYELTVNIGVP-SYALAIILLTVIIKVALYPLSKKQMHSMVMMQK 62
Query: 153 LAPQVKAIQERYAG-DQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVA 211
LAP++KAIQ++Y D + +Q + LYK +NP+AGCLP L +P+ I LYRAL
Sbjct: 63 LAPEIKAIQDKYKNKDPQMMQQKIMELYKEHNVNPMAGCLPLLVQMPILIALYRALYAFP 122
Query: 212 DEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVV 271
+ FFW+ SL S Y +LP+L V
Sbjct: 123 FKNPDHAHFFWVTSL------------------------------SQKDPYFILPILAAV 152
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
+ Y+ K+ ++Q+ ++ + + +PL+IG+ A +VP+GL+LYW N++ T QQ
Sbjct: 153 TTYLQSKLTTNTQD-----QTQRTMLYMMPLLIGWIASTVPAGLALYWVVFNIVGTIQQW 207
Query: 332 WLQK 335
++ K
Sbjct: 208 FINK 211
>gi|375086753|ref|ZP_09733151.1| YidC/Oxa1 family membrane protein insertase [Megamonas funiformis
YIT 11815]
gi|374564292|gb|EHR35591.1| YidC/Oxa1 family membrane protein insertase [Megamonas funiformis
YIT 11815]
Length = 226
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 139/249 (55%), Gaps = 39/249 (15%)
Query: 92 DWLSGITN----VMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESS 147
D++S I N ++E +L + D +ST+ + +YG AII+LT+I+K A +PLT KQV+S
Sbjct: 2 DFISSIFNPIVQLLEFILGIFHDFLSTVGLE-SYGVAIIVLTIIIKMAFYPLTVKQVKSM 60
Query: 148 MAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRAL 207
AM+ L P++K +Q+++ D +R+Q E LYK AG+NPLAGCLP LA +P+ + ++ AL
Sbjct: 61 KAMQELQPKMKKLQDKFKNDPKRLQQEMGMLYKNAGVNPLAGCLPLLAQMPILMAMFYAL 120
Query: 208 SNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPV 267
++ G F WI +L+ P Y +LPV
Sbjct: 121 QSIDYGG--DPTFLWIMNLSNPD------------------------------PYYILPV 148
Query: 268 LLVVSQYISVKIIQSSQNNDPNMK-SSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLS 326
L +S Y+ V+ SS ++ P M+ + ++ +PL IG+ + + +GL +YW NN++
Sbjct: 149 LSAISTYV-VQKQTSSASSSPQMQMQMKIMSVVMPLFIGWISCNFAAGLVIYWIVNNIMQ 207
Query: 327 TAQQVWLQK 335
QQ W+ +
Sbjct: 208 ILQQWWMYR 216
>gi|401564012|ref|ZP_10804935.1| 60Kd inner membrane protein [Selenomonas sp. FOBRC6]
gi|400189293|gb|EJO23399.1| 60Kd inner membrane protein [Selenomonas sp. FOBRC6]
Length = 223
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 119/220 (54%), Gaps = 35/220 (15%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YGF IILLT+++K T+PLT KQV+S AM+ + P++K IQE+Y + + +Q +T L+
Sbjct: 34 SYGFPIILLTILIKVVTYPLTVKQVKSMKAMQEIQPKMKKIQEKYKNNPQMLQQKTGELF 93
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+ +G+NPLAGCLP L +P+ +G+Y AL N FFW+P+++ P
Sbjct: 94 RESGVNPLAGCLPLLVQMPILMGMYYALFNFTFPSPEAAAFFWLPNMSEP---------- 143
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
D F +LPVL + Y+ K+ + N + +
Sbjct: 144 ------------------DPFY--ILPVLSAATTYLQQKMTSTEMNAQ-----MKIMMTV 178
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGA 339
+PL IG+ +L+ PSGL LYW T N++ QQ W+ + GA
Sbjct: 179 MPLFIGWISLTFPSGLVLYWVTMNIVQITQQWWMYRGEGA 218
>gi|334127024|ref|ZP_08500960.1| stage III sporulation protein J [Centipeda periodontii DSM 2778]
gi|333390326|gb|EGK61466.1| stage III sporulation protein J [Centipeda periodontii DSM 2778]
Length = 224
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 121/226 (53%), Gaps = 37/226 (16%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YGF IILLT+++K T+PLT KQ++S AM+ + P++K IQE+Y + + +Q +T L+
Sbjct: 34 SYGFPIILLTILIKVVTYPLTVKQIKSMKAMQEIQPKMKKIQEKYKNNPQMLQQKTGELF 93
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+ AG+NPLAGCLP L +P+ +G+Y AL N FFW+P+++ P +
Sbjct: 94 REAGVNPLAGCLPLLVQMPILMGMYYALFNFTFPSPEAAAFFWLPNMSEPDPLY------ 147
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
+LPVL + Y+ K+ + N + +
Sbjct: 148 ------------------------ILPVLSAATTYLQQKMTSTEMNAQ-----MKIMMTV 178
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQ 345
+PL IG+ +L+ PSGL LYW T N++ QQ W+ + G P+K+
Sbjct: 179 MPLFIGWISLTFPSGLVLYWVTMNVVQITQQWWMYR--GENAPVKE 222
>gi|383755651|ref|YP_005434554.1| putative preprotein translocase YidC subunit [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381367703|dbj|BAL84531.1| putative preprotein translocase YidC subunit [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 225
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 122/216 (56%), Gaps = 34/216 (15%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YG+AIILLT+IVK A +PLT KQV+S AM+ L+P++K IQE+Y + + +Q + LY
Sbjct: 33 SYGWAIILLTIIVKMALYPLTVKQVKSMKAMQELSPKMKKIQEKYKDNPQVMQQKIGALY 92
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
K AG+NPLAGCLP L +P+ +G+Y +L N + + F W+ S++ P +
Sbjct: 93 KDAGVNPLAGCLPLLIQMPILMGMYYSLYNFSYPTPESAYFLWMTSMSEPDPMY------ 146
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
+LP+L ++ ++ K+ + NN P MK +
Sbjct: 147 ------------------------ILPILSALTTFLQQKMTTTDSNN-PQMK---MMMFI 178
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+PL IG+ +++ PSGL LYW T N++ AQQ W+ +
Sbjct: 179 MPLFIGWISINFPSGLVLYWVTMNVVQIAQQWWMYR 214
>gi|255659825|ref|ZP_05405234.1| stage III sporulation protein J [Mitsuokella multacida DSM 20544]
gi|260847900|gb|EEX67907.1| stage III sporulation protein J [Mitsuokella multacida DSM 20544]
Length = 222
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 129/244 (52%), Gaps = 36/244 (14%)
Query: 97 ITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQ 156
I N++ VL+ L + + +YG AIILLT+++K +PLT KQV+S AM+ L+P+
Sbjct: 11 IENLLHVVLQALYNVTDAAGIG-SYGVAIILLTILIKMMLYPLTVKQVKSMKAMQELSPK 69
Query: 157 VKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLL 216
+K IQE+Y + + +Q + LYK AG+NPLAGCLP L +P+ +G+Y AL N
Sbjct: 70 MKKIQEKYKDNPQVMQQKVGALYKEAGVNPLAGCLPLLIQMPILMGMYYALYNFTYPTPE 129
Query: 217 TEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYIS 276
+ F W+P+++ P Y +LPVL ++ ++
Sbjct: 130 SAAFLWLPNMSDPD------------------------------PYYILPVLSALTTFLQ 159
Query: 277 VKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKF 336
K Q++ + MK + +PL IG+ +L+ PSGL LYW T N++ QQ W+ +
Sbjct: 160 QK--QTTTEMNQQMK---IMMTVMPLFIGWISLNFPSGLVLYWVTMNIVQITQQWWMYRH 214
Query: 337 GGAK 340
K
Sbjct: 215 DDKK 218
>gi|374813176|ref|ZP_09716913.1| membrane protein insertase [Treponema primitia ZAS-1]
Length = 610
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 135/250 (54%), Gaps = 26/250 (10%)
Query: 95 SGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLA 154
SG +ET+LK L + +P YG AIILLT++VK FPLTKK ES++ M++L+
Sbjct: 360 SGFLGPLETLLKWLLVIFYKI-IP-NYGVAIILLTLLVKVVMFPLTKKGTESTLRMQTLS 417
Query: 155 PQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD-- 212
P++K +QE+Y + +++ E LYK G NPL+GCLP L P++ +Y + D
Sbjct: 418 PKIKELQEKYKDNPQKMNAEMGALYKKEGYNPLSGCLPMLVQFPIFFAMYNLFNTHFDLR 477
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLF-PFVDGHPPLGWSDTFAYLVLPVLLVV 271
+ G WIP L+ P +I W F PF P LGWS+ A LP + V
Sbjct: 478 GAMFIPG--WIPDLSLPESI----------WSFAPF--QLPLLGWSNLRA---LPFIYVG 520
Query: 272 SQYISVKIIQS-SQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
SQ + K+ Q+ Q + MK + +P+M + VPSGL +YW +N+L+ QQ
Sbjct: 521 SQLLYGKVTQTPDQKGNSQMK---MMLYLMPVMFFFILYDVPSGLLVYWIMSNVLTLVQQ 577
Query: 331 VWLQKFGGAK 340
+ + K+ K
Sbjct: 578 LTINKYLAKK 587
>gi|333993181|ref|YP_004525794.1| inner membrane protein OxaA [Treponema azotonutricium ZAS-9]
gi|333735222|gb|AEF81171.1| inner membrane protein OxaA [Treponema azotonutricium ZAS-9]
Length = 615
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/244 (36%), Positives = 132/244 (54%), Gaps = 24/244 (9%)
Query: 96 GITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAP 155
G +ET+LK + M + YG AIIL+T++VK FPLTKK ES+M M++L+P
Sbjct: 364 GFLAPLETLLKWIL--MFFHRIVRNYGVAIILVTLLVKLIMFPLTKKGSESTMRMQTLSP 421
Query: 156 QVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD--E 213
++K IQE+Y + +++ E A YK G NPL+GCLP + IP++ +Y +N D
Sbjct: 422 KIKEIQEKYKDNPQKMNAEMAAFYKKEGYNPLSGCLPMIIQIPIFFAMYNLFNNHFDLRG 481
Query: 214 GLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQ 273
+ G WIP L+ P ++ PF P LGWSD +LP + V SQ
Sbjct: 482 AMFIPG--WIPDLSLPESVYN---------FAPF--KLPFLGWSDI---RLLPFIYVGSQ 525
Query: 274 YISVKIIQS-SQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
+ K+ Q+ Q + MK + +P++ + VPSGL +YW +N+L+ QQV
Sbjct: 526 LLYGKVTQTPDQQGNAQMK---LMLYAMPIVFFFILYDVPSGLLIYWIMSNVLTMVQQVS 582
Query: 333 LQKF 336
+ KF
Sbjct: 583 INKF 586
>gi|269836199|ref|YP_003318427.1| 60 kDa inner membrane insertion protein [Sphaerobacter thermophilus
DSM 20745]
gi|269785462|gb|ACZ37605.1| 60 kDa inner membrane insertion protein [Sphaerobacter thermophilus
DSM 20745]
Length = 332
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 155/335 (46%), Gaps = 48/335 (14%)
Query: 122 GFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKL 181
G ++I+ T+++K PLT K V S+ AM+ + P++K +Q++Y D++R+ ET +LY+
Sbjct: 26 GLSVIIFTILIKTLLLPLTVKAVRSTSAMQEIQPKLKELQKKYGKDRQRLSQETMKLYQE 85
Query: 182 AGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLT--EGFFWIPSLAGPTTIAARQNGS 239
GINP AGCLP L +P+ GLY A+ +++ G T EGF W+PSLA
Sbjct: 86 HGINPAAGCLPMLLQLPILFGLYEAIRSLSQAGTGTWGEGFMWLPSLA------------ 133
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSS---QNNDPNMKSSQAL 296
T + +LPV+ + Q + K+ + + + DP + +
Sbjct: 134 ------------------STDPHYILPVMAGLFQLVQTKMTRPAGQGKITDPQQRMMNTM 175
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDERLD 356
F+PLM+ F + PSGL LYW + L S QQ ++ +G +D + ++ + RL
Sbjct: 176 MTFMPLMVVAFGVKFPSGLVLYWTVSALYSVIQQWFITGWGSMRDWLPFLPELPEHRRLG 235
Query: 357 INKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEAR----RRQQREEEKRKAAEA 412
+ + AR+ K + G +Q+ E R R Q EEE A
Sbjct: 236 YQD-----PAKRAAAREQAKNSWFARLNGRLQEQMAESAKRAGAVRPVQNEEEPVSTPTA 290
Query: 413 AAKGNQTINGEQEREASILGSAKGVQTDLVDKDDE 447
A T ++R + + + DLV +
Sbjct: 291 AGSARTT----KQRAGAAARPPRTPRPDLVPRKSR 321
>gi|323141441|ref|ZP_08076331.1| stage III sporulation protein J [Phascolarctobacterium
succinatutens YIT 12067]
gi|322414097|gb|EFY04926.1| stage III sporulation protein J [Phascolarctobacterium
succinatutens YIT 12067]
Length = 214
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 128/240 (53%), Gaps = 44/240 (18%)
Query: 97 ITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQ 156
+ N+++ VL VL + ++ +P G AI+L+T+I+K +PLT+KQ++S+ AM + P+
Sbjct: 4 LANIVQQVLTVLYNFTESVGIP-NLGLAIVLMTIIIKLIMYPLTQKQIQSTKAMMEIQPK 62
Query: 157 VKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRAL--SNVADEG 214
+KA+QE+Y D++R+ +E A LYK G+NPLAGCLP L +P+ IG++ + N A
Sbjct: 63 MKALQEKYKDDKQRLNMELANLYKSEGVNPLAGCLPLLIQMPIMIGIFYGIRDYNYAAHP 122
Query: 215 LLTEGFFWIPSL--AGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
+ F W+ + A PT VLPVL ++
Sbjct: 123 EIVTSFLWLADISKADPTY--------------------------------VLPVLSALT 150
Query: 273 QYISVKIIQSSQNNDPNMKSSQ--ALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+ IQ+ Q N +Q + F+PL IGY +L+ P+GL LYW N++ AQQ
Sbjct: 151 TF-----IQTKQTMPANGGGAQNKMMMYFMPLFIGYISLTFPAGLVLYWVVMNIMQIAQQ 205
>gi|390562153|ref|ZP_10244398.1| 60 kDa inner membrane insertion protein [Nitrolancetus hollandicus
Lb]
gi|390173276|emb|CCF83699.1| 60 kDa inner membrane insertion protein [Nitrolancetus hollandicus
Lb]
Length = 350
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 168/345 (48%), Gaps = 49/345 (14%)
Query: 122 GFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKL 181
G AII+ TV+VK PLT K V S+ +M+++ P++K +Q+++AGD+ ++Q E +LY+
Sbjct: 26 GLAIIVFTVLVKTVLLPLTVKSVRSTSSMQAIQPKIKDLQKKHAGDRAKLQAEQMKLYQE 85
Query: 182 AGINPLAGCLPTLATIPVWIGLYRALSNVADE--GLLTEGFFWIPSLAGPTTIAARQNGS 239
GINPL+GCLP + +P++ GLY A+ +++++ GL + F W+PSLA
Sbjct: 86 HGINPLSGCLPMVLQMPIFFGLYYAIRHLSNDAVGLWGQPFLWLPSLA------------ 133
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSS--QNNDPNMKSSQALT 297
D Y +LP++ + Q+I V++ + + ++ D + Q +
Sbjct: 134 -------VAD-----------PYHILPIVAAIFQFIQVRMTRPAGVKSGDSTQQMMQTAS 175
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDERLDI 357
NF+P + PSG +YW + L S QQ ++ +G + + D+ + +RL
Sbjct: 176 NFMPFTVIAIGWVFPSGPVVYWAVSALYSVIQQWFITGWGSLLEWLPFLPDLPEHKRLGY 235
Query: 358 NKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRRQQREEEKRKAAEA----A 413
+ K+ AR A T+ G +Q +Q + E+ ++ A++
Sbjct: 236 E------NPEKRAARVAASATSNSGFTGYLNRQFNKQVEKVESASEDVQKVTAKSNGKRV 289
Query: 414 AKGNQTINGEQEREASILGSAK-----GVQTDLVDKDDENFPSVT 453
A + +G+ R+AS + K G D D + PS+T
Sbjct: 290 APDDDESSGKTGRKASARPNGKQATPAGEDAHPPDGDQPSRPSIT 334
>gi|315925607|ref|ZP_07921817.1| stage III sporulation protein J [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315621148|gb|EFV01119.1| stage III sporulation protein J [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 296
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 146/317 (46%), Gaps = 65/317 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YGFA+IL T+IVK PL KQ S M+++ P++ +Q++Y + E++ ET +LYK
Sbjct: 22 YGFAVILFTIIVKTIILPLNIKQTNSMREMQAVQPELNNLQKKYKNNPEKLNAETMKLYK 81
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGL-------LTEGFFWIPSLAGPTTIA 233
L +NP+AGCLP L +P+ GL+ AL + A L GF+WIP+L P
Sbjct: 82 LYNVNPMAGCLPLLIQLPIIWGLFGALRSPAKYVFTNGNLSALRAGFYWIPNLGKPD--- 138
Query: 234 ARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQN--NDPNMK 291
Y VLP+L VV +I+ + Q+ N
Sbjct: 139 ---------------------------PYFVLPILCVVLTFITQWYMMRFQDDGNKAAQS 171
Query: 292 SSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIK 351
S + + +PLMIG+FA+ +P+G++LYW N + QQ F + P+
Sbjct: 172 SQKVMLYVMPLMIGWFAVKMPAGVALYWVVQNAYTFVQQ-----FLVMRKPV-------- 218
Query: 352 DERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRRQQREEEKRKAAE 411
E++ I ++ + K++ ++ EK ++EQ R+QQ + K A+
Sbjct: 219 -EKVSIEEAERRVEEAKRQEKK------------EKKSMLKEQSQMRQQQMTGQSGKTAK 265
Query: 412 AAAKGNQTINGEQEREA 428
A +T R+
Sbjct: 266 KKASRPKTKPASSRRKV 282
>gi|390940581|ref|YP_006404318.1| protein translocase subunit yidC [Sulfurospirillum barnesii SES-3]
gi|390193688|gb|AFL68743.1| protein translocase subunit yidC [Sulfurospirillum barnesii SES-3]
Length = 528
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 130/250 (52%), Gaps = 41/250 (16%)
Query: 97 ITNVMET-----VLKVLKDGMSTLHVPYA-YGFAIILLTVIVKAATFPLTKKQVESSMAM 150
+T+V+E + K L +S LH + +G+AI+ +T+IV+ +PLT K + S +
Sbjct: 307 LTDVVEYGFFTFIAKPLFSLLSYLHGIFGNWGWAIVAMTIIVRLVLYPLTYKGMVSMNKL 366
Query: 151 RSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNV 210
+ LAP+VK +Q++Y D++++ + LYK G NP+ GCLP L IPV+ +YR L N
Sbjct: 367 KELAPKVKELQKKYGDDKQKLNMHMMELYKKHGANPMGGCLPILLQIPVFFAVYRVLQN- 425
Query: 211 ADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLV 270
A E E W+ LA +D Y +LPVL+
Sbjct: 426 AIELKGAEWILWVHDLA-------------------VMD-----------PYFILPVLMG 455
Query: 271 VSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
++ + KI ++ NDP + + FLPL+ +F ++ P+GL+LYWFTNNL S QQ
Sbjct: 456 LTMFFHQKITPTT-FNDP---MQEKIMKFLPLIFTFFFVTFPAGLTLYWFTNNLASIVQQ 511
Query: 331 VWLQKFGGAK 340
++ K K
Sbjct: 512 FYVNKLFAKK 521
>gi|258517431|ref|YP_003193653.1| 60 kDa inner membrane insertion protein [Desulfotomaculum
acetoxidans DSM 771]
gi|257781136|gb|ACV65030.1| 60 kDa inner membrane insertion protein [Desulfotomaculum
acetoxidans DSM 771]
Length = 223
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 117/217 (53%), Gaps = 37/217 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAG-DQERI-QLETARL 178
YG AIILLTVI+K +PLTKKQ+ S +M+ L P++K +Q +Y G DQ++I Q +T L
Sbjct: 30 YGLAIILLTVIIKMLLYPLTKKQMLSMRSMQQLQPKIKELQNKYKGKDQQQIMQQKTMEL 89
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNG 238
YK INP+AGCLP L +P+ I LYRAL N F W+P+L
Sbjct: 90 YKEHNINPMAGCLPLLIQMPILIALYRALYNFKYLNTAHANFLWVPNL------------ 137
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTN 298
S+ +++LP+L S Y+ K+ ++ +DP + Q +
Sbjct: 138 ------------------SNVDPWVILPILAGASTYLQSKL--TTTTSDP---TQQIMLY 174
Query: 299 FLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+PL IGY + +P+GL+LYW NL+ QQ ++ K
Sbjct: 175 TMPLFIGYISYKMPAGLALYWVVFNLVGAIQQYYINK 211
>gi|421075119|ref|ZP_15536134.1| membrane protein insertase, YidC/Oxa1 family [Pelosinus fermentans
JBW45]
gi|392526561|gb|EIW49672.1| membrane protein insertase, YidC/Oxa1 family [Pelosinus fermentans
JBW45]
Length = 212
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 123/236 (52%), Gaps = 38/236 (16%)
Query: 100 VMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKA 159
+++ +L D +++ +P YG AIIL+T+I+K +PLT KQV+ AM+ L P++K
Sbjct: 10 LLQHILTFFYDMTASIGIP-NYGIAIILVTLIIKLLLYPLTVKQVKGMKAMQDLQPKMKE 68
Query: 160 IQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEG 219
+QE+Y G+ E++ E A LYK +G+NPL+GCLP L +P+ +G++ A+ + +
Sbjct: 69 LQEKYKGNPEKLNKEMALLYKESGVNPLSGCLPLLVQMPILMGIFFAIRDYQYAQI--PS 126
Query: 220 FFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKI 279
F WI +L+ P + +LPVL + Y+ K
Sbjct: 127 FLWIANLSHPDPLY------------------------------ILPVLSAATTYVQQKQ 156
Query: 280 IQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
S N M + F+PL IGY +++ P+GL LYW +N AQQ W+ +
Sbjct: 157 TSSDMNQQAKM-----MMTFMPLFIGYISITFPAGLVLYWVMSNAFQIAQQWWMYR 207
>gi|402303974|ref|ZP_10823053.1| putative stage III sporulation protein J [Selenomonas sp. FOBRC9]
gi|400375900|gb|EJP28793.1| putative stage III sporulation protein J [Selenomonas sp. FOBRC9]
Length = 225
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 120/216 (55%), Gaps = 35/216 (16%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YGF IILLT+++K T+PLT KQV+S AM+ + P++K IQE+Y D +Q +T L+
Sbjct: 34 SYGFPIILLTILIKLVTYPLTVKQVKSMKAMQEIQPKMKKIQEKYKNDPRMLQQKTGELF 93
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+ AG+NPLAGCLP L +P+ +G+Y AL N A E F WIP L+ P +
Sbjct: 94 RQAGVNPLAGCLPLLVQMPILMGMYYALFNFAYPSEAAEAFLWIPHLSAPDPL------- 146
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
+LPVL ++ ++ K+ +S +P MK +
Sbjct: 147 -----------------------YILPVLSALTTFLQQKM--TSTEMNPQMK---IMMTV 178
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+PL IG+ +L+ P+GL LYW T N++ AQQ W+ +
Sbjct: 179 MPLFIGWISLNFPAGLVLYWVTMNIVQIAQQWWMYR 214
>gi|390559291|ref|ZP_10243639.1| 60 kDa inner membrane insertion protein [Nitrolancetus hollandicus
Lb]
gi|390174130|emb|CCF82932.1| 60 kDa inner membrane insertion protein [Nitrolancetus hollandicus
Lb]
Length = 320
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 124/238 (52%), Gaps = 34/238 (14%)
Query: 122 GFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKL 181
G +II+ T+++K P T K V S+ +M+++ P++K +Q++YAGD+ +IQ E +LY+
Sbjct: 26 GLSIIIFTILIKTVLLPFTIKSVRSTSSMQAMQPKIKELQKKYAGDKAKIQAEQMKLYQE 85
Query: 182 AGINPLAGCLPTLATIPVWIGLYRALSNVADEG--LLTEGFFWIPSLAGPTTIAARQNGS 239
G+NP++GCLP L +P++ GLY A+ N++ G L T+ F W+PS+A
Sbjct: 86 HGVNPVSGCLPMLVQVPIFFGLYYAIINLSRHGGGLWTQSFLWLPSMA------------ 133
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSS--QNNDPNMKSSQALT 297
+ Y +LP++ + Q+I VK+ + + ++ D + Q +
Sbjct: 134 ------------------EADPYHILPIVAGIFQFIQVKMTRPAGVKSGDSTQQMMQTAS 175
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDERL 355
F+PL + PSG LYW + L S QQ ++ +G + D+ + RL
Sbjct: 176 TFMPLTVVAIGWVFPSGPVLYWAVSALYSVVQQWFITGWGSLLEWFPFLPDLPEHRRL 233
>gi|313894712|ref|ZP_07828273.1| stage III sporulation protein J [Selenomonas sp. oral taxon 137
str. F0430]
gi|312976621|gb|EFR42075.1| stage III sporulation protein J [Selenomonas sp. oral taxon 137
str. F0430]
Length = 225
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 120/216 (55%), Gaps = 35/216 (16%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YGF IILLT+++K T+PLT KQV+S AM+ + P++K IQE+Y D +Q +T L+
Sbjct: 34 SYGFPIILLTILIKLVTYPLTVKQVKSMKAMQEIQPKMKKIQEKYKNDPRMLQQKTGELF 93
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+ AG+NPLAGCLP L +P+ +G+Y AL N A E F WIP L+ P +
Sbjct: 94 RQAGVNPLAGCLPLLVQMPILMGMYYALFNFAYPSEAAEAFLWIPHLSAPDPL------- 146
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
+LPVL ++ ++ K+ +S +P MK +
Sbjct: 147 -----------------------YILPVLSALTTFLQQKM--TSTEMNPQMK---IMMTV 178
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+PL IG+ +L+ P+GL LYW T N++ AQQ W+ +
Sbjct: 179 MPLFIGWISLNFPAGLVLYWVTMNIVQIAQQWWMYR 214
>gi|268680016|ref|YP_003304447.1| membrane protein insertase, YidC/Oxa1 family [Sulfurospirillum
deleyianum DSM 6946]
gi|268618047|gb|ACZ12412.1| membrane protein insertase, YidC/Oxa1 family [Sulfurospirillum
deleyianum DSM 6946]
Length = 532
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 130/255 (50%), Gaps = 49/255 (19%)
Query: 96 GITNVMET-----VLKVLKDGMSTLHVPYA-YGFAIILLTVIVKAATFPLTKKQVESSMA 149
G+T+V+E + K L +S LH + +G+AI+ +T+IV+ +PLT K + S
Sbjct: 309 GLTDVVEYGFFTFIAKPLFTLLSFLHGIFGNWGWAIVAMTIIVRLVLYPLTYKGMVSMNK 368
Query: 150 MRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSN 209
++ LAP+VK +Q++Y D++++ + LYK G NP+ GCLP L IPV+ +YR L N
Sbjct: 369 LKELAPKVKELQKKYGDDKQKLNIHMMELYKKHGANPMGGCLPILLQIPVFFAVYRVLQN 428
Query: 210 VADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFA----YLVL 265
+ G +W+ W A Y +L
Sbjct: 429 AIEL-------------------------KGAAWIL----------WVQDLAVMDPYFIL 453
Query: 266 PVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLL 325
PVL+ ++ ++ +I ++ NDP + + +LPL+ +F ++ P+GL+LYWFTNNL
Sbjct: 454 PVLMGLTMFLHQRITPTT-FNDP---MQEKIMKYLPLIFTFFFVTFPAGLTLYWFTNNLA 509
Query: 326 STAQQVWLQKFGGAK 340
S QQ ++ K K
Sbjct: 510 SIVQQFYVNKLFAKK 524
>gi|320531077|ref|ZP_08032106.1| putative OxaA-like protein [Selenomonas artemidis F0399]
gi|320136659|gb|EFW28612.1| putative OxaA-like protein [Selenomonas artemidis F0399]
Length = 225
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 120/216 (55%), Gaps = 35/216 (16%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YGF IILLT+++K T+PLT KQV+S AM+ + P++K IQE+Y D +Q +T L+
Sbjct: 34 SYGFPIILLTILIKLVTYPLTVKQVKSMKAMQEIQPKMKKIQEKYKNDPRMLQQKTGELF 93
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+ AG+NPLAGCLP L +P+ +G+Y AL N A E F WIP L+ P +
Sbjct: 94 RQAGVNPLAGCLPLLVQMPILMGMYYALFNFAYPSEAAEAFLWIPHLSAPDPL------- 146
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
+LPVL ++ ++ K+ +S +P MK +
Sbjct: 147 -----------------------YILPVLSALTTFLQQKM--TSTEMNPQMK---IMMTV 178
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+PL IG+ +L+ P+GL LYW T N++ AQQ W+ +
Sbjct: 179 MPLFIGWISLNFPAGLVLYWVTMNIVQIAQQWWMYR 214
>gi|392961588|ref|ZP_10327044.1| membrane protein insertase, YidC/Oxa1 family [Pelosinus fermentans
DSM 17108]
gi|421055502|ref|ZP_15518465.1| membrane protein insertase, YidC/Oxa1 family [Pelosinus fermentans
B4]
gi|421060332|ref|ZP_15522827.1| membrane protein insertase, YidC/Oxa1 family [Pelosinus fermentans
B3]
gi|421067272|ref|ZP_15528770.1| membrane protein insertase, YidC/Oxa1 family [Pelosinus fermentans
A12]
gi|421072384|ref|ZP_15533495.1| membrane protein insertase, YidC/Oxa1 family [Pelosinus fermentans
A11]
gi|392439885|gb|EIW17586.1| membrane protein insertase, YidC/Oxa1 family [Pelosinus fermentans
B4]
gi|392446021|gb|EIW23323.1| membrane protein insertase, YidC/Oxa1 family [Pelosinus fermentans
A11]
gi|392450040|gb|EIW27094.1| membrane protein insertase, YidC/Oxa1 family [Pelosinus fermentans
A12]
gi|392453596|gb|EIW30468.1| membrane protein insertase, YidC/Oxa1 family [Pelosinus fermentans
DSM 17108]
gi|392457357|gb|EIW34033.1| membrane protein insertase, YidC/Oxa1 family [Pelosinus fermentans
B3]
Length = 212
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 125/236 (52%), Gaps = 38/236 (16%)
Query: 100 VMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKA 159
+++ +L D +++ +P YG AIIL+T+I+K +PLT KQV+ AM+ L P++K
Sbjct: 10 LLQHILTFFYDMTASIGIP-NYGIAIILVTLIIKLLLYPLTVKQVKGMKAMQDLQPKMKE 68
Query: 160 IQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEG 219
+QE+Y G+ E++ E A LYK +G+NPL+GCLP L +P+ +G++ A+ + +
Sbjct: 69 LQEKYKGNPEKLNKEMALLYKESGVNPLSGCLPLLVQMPILMGIFFAIRDYQYAQI--PS 126
Query: 220 FFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKI 279
F WI +L+ P + +LPVL + YI
Sbjct: 127 FLWIANLSHPDPLY------------------------------ILPVLSAATTYIQ--- 153
Query: 280 IQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
Q + D N ++ +T F+PL IGY +++ P+GL LYW +N QQ W+ +
Sbjct: 154 -QKQTSTDMNQQAKMMMT-FMPLFIGYISITFPAGLVLYWVMSNAFQIVQQWWMYR 207
>gi|352685798|ref|YP_004897783.1| sporulation associated-membrane protein [Acidaminococcus intestini
RyC-MR95]
gi|350280453|gb|AEQ23643.1| sporulation associated-membrane protein [Acidaminococcus intestini
RyC-MR95]
Length = 203
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 123/236 (52%), Gaps = 39/236 (16%)
Query: 101 METVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAI 160
M+ V+ + + + P +YG AII++T+++K +PLTK+Q+ S+ AM + P++K +
Sbjct: 1 MQQVVSAIYEATRMIGEP-SYGLAIIIMTILIKLLLYPLTKRQIASTKAMSRIQPRMKEL 59
Query: 161 QERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF 220
Q RY D+ ++ E ++LYK G+NPLAGCLP + +P+ IG++ + + EG F
Sbjct: 60 QMRYRDDKMKLNEELSKLYKKEGVNPLAGCLPLVIQMPIMIGIFYGIRDFNYEG--PSSF 117
Query: 221 FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII 280
W+ S+ P Y +LP+L ++ Y I
Sbjct: 118 LWMQSIGQPD------------------------------PYYILPILSALTTY-----I 142
Query: 281 QSSQNNDP-NMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
QS Q+ P + + + + F+PL IGY +L P+GL LYW NL+ QQ ++ +
Sbjct: 143 QSRQSMPPSDNPTGKVMLYFMPLFIGYISLKFPAGLVLYWVVMNLMQIGQQFFMDR 198
>gi|227498802|ref|ZP_03928942.1| sporulation associated-membrane protein [Acidaminococcus sp. D21]
gi|226904254|gb|EEH90172.1| sporulation associated-membrane protein [Acidaminococcus sp. D21]
Length = 210
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 115/217 (52%), Gaps = 38/217 (17%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YG AII++T+++K +PLTK+Q+ S+ AM + P++K +Q RY D+ ++ E ++LY
Sbjct: 26 SYGLAIIIMTILIKLLLYPLTKRQIASTKAMSRIQPRMKELQMRYRDDKMKLNEELSKLY 85
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
K G+NPLAGCLP + +P+ IG++ + + EG F W+ S+ P
Sbjct: 86 KKEGVNPLAGCLPLVIQMPIMIGIFYGIRDFNYEG--PSSFLWMQSIGQPD--------- 134
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDP-NMKSSQALTN 298
Y +LP+L ++ Y IQS Q+ P + + + +
Sbjct: 135 ---------------------PYYILPILSALTTY-----IQSRQSMPPSDNPTGKVMLY 168
Query: 299 FLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
F+PL IGY +L P+GL LYW NL+ QQ ++ +
Sbjct: 169 FMPLFIGYISLKFPAGLVLYWVVMNLMQIGQQFFMDR 205
>gi|221633069|ref|YP_002522294.1| inner membrane protein oxaA [Thermomicrobium roseum DSM 5159]
gi|221155473|gb|ACM04600.1| inner membrane protein oxaA [Thermomicrobium roseum DSM 5159]
Length = 312
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 35/239 (14%)
Query: 122 GFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKL 181
G AIIL T+++K PLT K V S+ AM+ L P+++ +Q++Y D++R+ E +LY+
Sbjct: 26 GLAIILFTILIKTLLLPLTIKSVRSTKAMQELQPKIRELQKKYGQDRQRLSAEMMKLYQE 85
Query: 182 AGINPLAGCLPTLATIPVWIGLYRALSNVA--DEGLLTEGFFWIPSLAGPTTIAARQNGS 239
GINP++GCLP L IPV+ GLY A+ N++ G GF WIP LA P +
Sbjct: 86 HGINPMSGCLPMLLQIPVFFGLYFAIRNLSLSQVGAWAHGFLWIPDLAKPDPLH------ 139
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSS---QNNDPNMKSSQAL 296
+LP+L + Q+I ++ + + + DP + ++
Sbjct: 140 ------------------------ILPILAGLFQFIQTRMTRPAGVRRFEDPQQQMMYSM 175
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDERL 355
F+PLM+ F + +G LYW + + S QQ + +G +D + ++ + RL
Sbjct: 176 MLFMPLMVVLFGWNFAAGPVLYWVVSAVYSVVQQWLITGWGAMRDWLPFLPELPEHRRL 234
>gi|118474690|ref|YP_891743.1| putative inner membrane protein translocase component YidC
[Campylobacter fetus subsp. fetus 82-40]
gi|118413916|gb|ABK82336.1| inner membrane protein, 60 kDa [Campylobacter fetus subsp. fetus
82-40]
Length = 531
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 119/243 (48%), Gaps = 41/243 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M +L L + + +GFAI+ LT++++ FPLT K + S ++
Sbjct: 313 WFTFIAKPMFLLLSWLHNYIGN------WGFAIVALTIVIRIVLFPLTYKGMVSMNKLKD 366
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K IQ +Y GD ++ LYK G NP+ GCLP L IP++ +YR L N A
Sbjct: 367 LAPKMKEIQAKYKGDPSKLNAHVMELYKKNGANPMGGCLPILIQIPIFFAIYRVLLN-AI 425
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI LA +D Y +LPVL+ +
Sbjct: 426 ELKGAPWIFWIKDLA-------------------IMD-----------PYFILPVLMGAT 455
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
+I K I + DP + + FLPL+ +F ++ P+GL+LYWF NNL S AQQ+
Sbjct: 456 MFIQQK-ITPANFTDP---MQEKIMKFLPLIFTFFFVTFPAGLTLYWFINNLCSVAQQLV 511
Query: 333 LQK 335
+ K
Sbjct: 512 VNK 514
>gi|342214904|ref|ZP_08707574.1| 60Kd inner membrane protein [Veillonella sp. oral taxon 780 str.
F0422]
gi|341590206|gb|EGS33452.1| 60Kd inner membrane protein [Veillonella sp. oral taxon 780 str.
F0422]
Length = 212
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 114/216 (52%), Gaps = 35/216 (16%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YG AIILLT+++K PLT+KQV+S M L P++KAIQ++Y + ++ Q E ++Y
Sbjct: 29 SYGIAIILLTIVIKLILAPLTQKQVQSMKGMAELQPKMKAIQDKYKDNPQKAQQEIMKMY 88
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
K GINPLAGCLP L +P I ++ AL + + F W+P+L+ P I
Sbjct: 89 KELGINPLAGCLPLLVQMPFLIAIFYALQGYPYDPQYAQ-FLWLPNLSDPDPIY------ 141
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
VLPVL +S YI K +S NN + ++ + F
Sbjct: 142 ------------------------VLPVLSALSTYIMSKQTSASGNN----QQAKIMNIF 173
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+PL IGY +L+ SGL +YW +NL AQQ + +
Sbjct: 174 MPLFIGYISLNFASGLVIYWVVSNLFQLAQQTLIYR 209
>gi|416115074|ref|ZP_11593942.1| Inner membrane protein translocase component YidC2C [Campylobacter
concisus UNSWCD]
gi|384577866|gb|EIF07140.1| Inner membrane protein translocase component YidC2C [Campylobacter
concisus UNSWCD]
Length = 518
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 123/243 (50%), Gaps = 41/243 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + + +G+AI++LT++++ FPLT K + S ++
Sbjct: 303 WFTFIAKPMFAFLNFLHNYIGN------WGWAIVVLTLVIRIVLFPLTYKGMLSMNKLKE 356
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP+VK IQ +Y D++++Q+ LYK G NP+ GCLP L IPV+ +YR L N +
Sbjct: 357 LAPKVKEIQTKYKDDKQKMQVHMMELYKKHGANPMGGCLPILLQIPVFFAIYRVLLNAIE 416
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
+G WI W+ P Y VLP+L+ ++
Sbjct: 417 ----LKGAPWI------------------LWIHDLSVMDP---------YFVLPILMGLT 445
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ K+ ++ DP + + FLPL+ +F ++ P+GL+LYWF NN+ S QQV+
Sbjct: 446 MFLQQKLTPTTFT-DP---MQEKVMKFLPLIFTFFFVTFPAGLTLYWFVNNVCSVVQQVF 501
Query: 333 LQK 335
+ K
Sbjct: 502 VNK 504
>gi|297618524|ref|YP_003703683.1| YidC/Oxa1 family membrane protein insertase [Syntrophothermus
lipocalidus DSM 12680]
gi|297146361|gb|ADI03118.1| membrane protein insertase, YidC/Oxa1 family [Syntrophothermus
lipocalidus DSM 12680]
Length = 259
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 140/275 (50%), Gaps = 45/275 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YGFAIIL+T+ +K +PLT KQ++S M+ L P++K +QERY D +R+Q E LYK
Sbjct: 28 YGFAIILVTIAIKLLLYPLTHKQMKSMRKMQELQPRLKLLQERYKEDPQRMQKEVFDLYK 87
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G++PL+GCLP L +P+ + YRAL + F W+P+L+ P
Sbjct: 88 EHGVSPLSGCLPLLIQLPILVAFYRALYQLKYTVPAHAAFLWVPTLSKPD---------- 137
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
Y +L V+ YI K+ DPN S +++ +
Sbjct: 138 --------------------PYYGFAILAGVTTYIQQKL----STLDPNDPSQKSMLYVM 173
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ-KFGGAKDPMKQFSDIIKDERLDINK 359
P+ I + A ++P+GL+LYW T N+LS AQQ W+ + GG KD D R++ K
Sbjct: 174 PVFIAWLAATLPAGLALYWVTFNVLSIAQQAWVNARSGGTKDS--------PDGRVERGK 225
Query: 360 SVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQ 394
V KKE+ +++ +G GE+ K+ +++
Sbjct: 226 VVAAGGEGKKESVMSDEGGKDG--DGERRKKGKKR 258
>gi|365152937|ref|ZP_09349383.1| YidC/Oxa1 family membrane protein insertase [Campylobacter sp.
10_1_50]
gi|363652644|gb|EHL91677.1| YidC/Oxa1 family membrane protein insertase [Campylobacter sp.
10_1_50]
Length = 518
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 123/243 (50%), Gaps = 41/243 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + + +G+AI++LT++++ FPLT K + S ++
Sbjct: 303 WFTFIAKPMFAFLNFLHNYIGN------WGWAIVVLTLVIRIVLFPLTYKGMLSMNKLKE 356
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP+VK IQ +Y D++++Q+ LYK G NP+ GCLP L IPV+ +YR L N +
Sbjct: 357 LAPKVKEIQTKYKDDKQKMQVHMMELYKKHGANPMGGCLPILLQIPVFFAIYRVLLNAIE 416
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
+G WI W+ P Y VLP+L+ ++
Sbjct: 417 ----LKGAPWI------------------LWIHDLSVMDP---------YFVLPILMGLT 445
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ K+ ++ DP + + FLPL+ +F ++ P+GL+LYWF NN+ S QQV+
Sbjct: 446 MFLQQKLTPTTFT-DP---MQEKVMKFLPLIFTFFFVTFPAGLTLYWFVNNVCSVVQQVF 501
Query: 333 LQK 335
+ K
Sbjct: 502 VNK 504
>gi|157164729|ref|YP_001466647.1| inner membrane protein translocase component YidC [Campylobacter
concisus 13826]
gi|157101469|gb|EAT97433.2| inner membrane protein OxaA [Campylobacter concisus 13826]
Length = 517
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 123/243 (50%), Gaps = 41/243 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + + +G+AI++LT++++ FPLT K + S ++
Sbjct: 303 WFTFIAKPMFAFLNFLHNYIGN------WGWAIVVLTLVIRIVLFPLTYKGMLSMNKLKE 356
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP+VK IQ +Y D++++Q+ LYK G NP+ GCLP L IPV+ +YR L N +
Sbjct: 357 LAPKVKEIQTKYKDDKQKMQVHMMELYKKHGANPMGGCLPILLQIPVFFAIYRVLLNAIE 416
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
+G WI W+ P Y VLP+L+ ++
Sbjct: 417 ----LKGAPWI------------------LWIHDLSVMDP---------YFVLPILMGLT 445
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ K+ ++ DP + + FLPL+ +F ++ P+GL+LYWF NN+ S QQV+
Sbjct: 446 MFLQQKLTPTTFT-DP---MQEKVMKFLPLIFTFFFVTFPAGLTLYWFVNNVCSVVQQVF 501
Query: 333 LQK 335
+ K
Sbjct: 502 VNK 504
>gi|152990628|ref|YP_001356350.1| inner membrane protein translocase component YidC [Nitratiruptor
sp. SB155-2]
gi|151422489|dbj|BAF69993.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 528
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 120/234 (51%), Gaps = 35/234 (14%)
Query: 107 VLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAG 166
+ K ++ H+ +G+AI++LT+I++ FPLT K + S ++ LAP++K +Q++Y G
Sbjct: 322 MFKALLALYHLIGNWGWAIVVLTIIIRIILFPLTLKGMLSMQKLKDLAPKIKELQQKYKG 381
Query: 167 DQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSL 226
D +++ +LYK G NP+ GCLP L IPV+ +YR L N +
Sbjct: 382 DPQKLNAHMMQLYKKHGANPMGGCLPMLLQIPVFFAIYRVLLNAIEL------------- 428
Query: 227 AGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNN 286
G W+ D S Y +LPVL+ + YI KI ++
Sbjct: 429 ------------KGAPWILWITD------LSSKDPYFILPVLMGATMYIHQKITPTTIT- 469
Query: 287 DPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
DP K + +LP++ +F L+ P+GL+LYWF NN+LS QQ+ + K A+
Sbjct: 470 DPMQKK---IFEWLPIVFTFFFLTFPAGLTLYWFVNNILSIIQQLIVNKIFEAR 520
>gi|291285982|ref|YP_003502798.1| YidC/Oxa1 family membrane protein insertase [Denitrovibrio
acetiphilus DSM 12809]
gi|290883142|gb|ADD66842.1| membrane protein insertase, YidC/Oxa1 family [Denitrovibrio
acetiphilus DSM 12809]
Length = 509
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 120/232 (51%), Gaps = 38/232 (16%)
Query: 104 VLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQER 163
+LK LK S +H YG AIILLT+++K TFPLT+K + S M SL P++ I+E+
Sbjct: 313 MLKFLKIIYSYVH---NYGVAIILLTLVIKILTFPLTQKSMVSMKKMSSLQPKMLEIKEK 369
Query: 164 YAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWI 223
+ GD+E+ T LYK G+NPL GCLP + IP++ LY+ L
Sbjct: 370 FKGDKEKTNAATMELYKNEGVNPLGGCLPMVLQIPIFFALYKTL---------------- 413
Query: 224 PSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSS 283
+A G+ PF+ L D Y + P+L+ S ++ K+ S+
Sbjct: 414 -------LLAIELQGA------PFMLWITDLSLKD--PYYISPILMGASMFLQQKMTPST 458
Query: 284 QNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
DP Q + F+PL+ + L+ P+GL +YW TNN+LS AQQ ++ K
Sbjct: 459 A-QDP---LQQKIFTFMPLIFTFLFLTFPAGLVVYWLTNNVLSIAQQYFINK 506
>gi|253827793|ref|ZP_04870678.1| putative inner membrane protein translocase component YidC
[Helicobacter canadensis MIT 98-5491]
gi|313142010|ref|ZP_07804203.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253511199|gb|EES89858.1| putative inner membrane protein translocase component YidC
[Helicobacter canadensis MIT 98-5491]
gi|313131041|gb|EFR48658.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 536
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 113/215 (52%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PLT K + S ++ LAP++K IQ++Y G+ +++Q+ LYK
Sbjct: 337 WGWAIILLTLIVRVVLYPLTYKGMVSMQKLKELAPKMKEIQQKYKGEPQKLQVHMMELYK 396
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NP+ GCLP L +PV+ +YR L N + G
Sbjct: 397 KHGANPMGGCLPLLLQMPVFFAIYRVLYNAIE-------------------------LKG 431
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+WL D L D Y VLP+L+ ++ Y+ + ++ NDP + + FL
Sbjct: 432 AAWLLWIQD----LSVMD--PYFVLPILMGITMYLQQHLTPTT-FNDP---IQEKIFKFL 481
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ PSGL LYWF NN+ S QQ+ + K
Sbjct: 482 PLIFTIFFVTFPSGLVLYWFVNNIFSILQQLLINK 516
>gi|304437936|ref|ZP_07397882.1| stage III sporulation protein J [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304369076|gb|EFM22755.1| stage III sporulation protein J [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 224
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 128/245 (52%), Gaps = 36/245 (14%)
Query: 91 SDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAM 150
S+ + I ++++ +L S + +YGF IILLT+++K T+PLT KQV+S AM
Sbjct: 6 SNLFAPIIHILQVILGAFYSVTSAAGLE-SYGFPIILLTILIKLVTYPLTVKQVKSMKAM 64
Query: 151 RSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNV 210
+ + P++K IQE+Y D + +Q +T L++ AG+NPLAGCLP L +P+ +G+Y AL N
Sbjct: 65 QDIQPKMKKIQEKYKHDPQMLQQKTGELFREAGVNPLAGCLPLLVQMPILMGMYYALFNF 124
Query: 211 ADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLV 270
FFW+PS++ P Y +LPVL
Sbjct: 125 TFPSAEAAAFFWLPSMSEPD------------------------------PYYILPVLSA 154
Query: 271 VSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+ ++ K+ S + + +PL IG+ +L+ PSGL LYW T N++ AQQ
Sbjct: 155 ATTFLQQKMTSSEMTGQ-----MKIMMTVMPLFIGWISLTFPSGLVLYWVTMNVVQIAQQ 209
Query: 331 VWLQK 335
W+ +
Sbjct: 210 WWMYR 214
>gi|269798910|ref|YP_003312810.1| hypothetical protein [Veillonella parvula DSM 2008]
gi|269095539|gb|ACZ25530.1| 60 kDa inner membrane insertion protein [Veillonella parvula DSM
2008]
Length = 221
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 129/253 (50%), Gaps = 37/253 (14%)
Query: 92 DWLSGI----TNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESS 147
D+LSGI ++M T++ + P +YG AIILLT+++KA PLT KQ++S
Sbjct: 2 DFLSGIFQPIVDLMSTLVTYAFQLTQMIGYP-SYGVAIILLTIVIKAILAPLTVKQIKSM 60
Query: 148 MAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRAL 207
AM+ L P++K +Q++Y D ++Q E LYK G+NPLAGCLP L +P I +Y AL
Sbjct: 61 KAMQELQPRMKQLQDKYKNDPAKLQAEMGALYKEMGVNPLAGCLPLLVQMPFLIAIYWAL 120
Query: 208 SNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPV 267
+ + + F W+PSL P + +LP+
Sbjct: 121 KDYPYDPNFVQ-FLWLPSLGDPDPMY------------------------------ILPI 149
Query: 268 LLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLST 327
L +S ++ + SS + + +T F+PL IGY +LS PSGL +YW +N+
Sbjct: 150 LSALSTWVMSR-QTSSGATGAAAQQQKIMTIFMPLFIGYISLSFPSGLVIYWVVSNVFQL 208
Query: 328 AQQVWLQKFGGAK 340
QQ ++ K AK
Sbjct: 209 IQQHFIYKNLNAK 221
>gi|296273897|ref|YP_003656528.1| membrane protein insertase [Arcobacter nitrofigilis DSM 7299]
gi|296098071|gb|ADG94021.1| membrane protein insertase, YidC/Oxa1 family [Arcobacter
nitrofigilis DSM 7299]
Length = 548
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 120/247 (48%), Gaps = 49/247 (19%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I N M L+ L+ + +G+ I+ T+I+K FPL+ K + S ++
Sbjct: 329 WFTFIANPMFLFLQFLQSYIGN------WGWTIVFATIIIKLILFPLSYKGMMSMQKLKD 382
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K +QE+Y GD+++ LYK G NP+ GCLP + IPV+ LYR + N +
Sbjct: 383 LAPKIKELQEKYKGDKQKQSAHMMELYKKHGANPMGGCLPLIMQIPVFFALYRVILNAIE 442
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFA----YLVLPVL 268
+ G P + W A Y VLP+L
Sbjct: 443 -----------------------------------LKGSPWILWIHDLALMDPYYVLPIL 467
Query: 269 LVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTA 328
+ +S ++ +I ++ ++ K Q FLP++ +F L P+GL+LYWF NNL + +
Sbjct: 468 MGISMFLQQRITPNTMQDETQKKIFQ----FLPVVFTFFFLWFPAGLTLYWFINNLFTIS 523
Query: 329 QQVWLQK 335
QQ+++ K
Sbjct: 524 QQLFINK 530
>gi|282848769|ref|ZP_06258164.1| membrane protein insertase, YidC/Oxa1 family [Veillonella parvula
ATCC 17745]
gi|294792401|ref|ZP_06757548.1| membrane protein insertase, YidC/Oxa1 family [Veillonella sp.
6_1_27]
gi|294794207|ref|ZP_06759343.1| membrane protein insertase, YidC/Oxa1 family [Veillonella sp.
3_1_44]
gi|417000073|ref|ZP_11940427.1| membrane protein insertase, YidC/Oxa1 family [Veillonella parvula
ACS-068-V-Sch12]
gi|282581555|gb|EFB86943.1| membrane protein insertase, YidC/Oxa1 family [Veillonella parvula
ATCC 17745]
gi|294454537|gb|EFG22910.1| membrane protein insertase, YidC/Oxa1 family [Veillonella sp.
3_1_44]
gi|294456300|gb|EFG24663.1| membrane protein insertase, YidC/Oxa1 family [Veillonella sp.
6_1_27]
gi|333976319|gb|EGL77188.1| membrane protein insertase, YidC/Oxa1 family [Veillonella parvula
ACS-068-V-Sch12]
Length = 221
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 130/254 (51%), Gaps = 39/254 (15%)
Query: 92 DWLSGI----TNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESS 147
D+LSGI ++M T++ + P +YG AIILLT+++KA PLT KQ++S
Sbjct: 2 DFLSGIFQPIVDLMSTLVTYAFQLTQMIGYP-SYGVAIILLTIVIKAILAPLTVKQIKSM 60
Query: 148 MAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRAL 207
AM+ L P++K +Q++Y D ++Q E LYK G+NPLAGCLP L +P I +Y AL
Sbjct: 61 KAMQELQPRMKQLQDKYKNDPAKLQAEMGALYKEMGVNPLAGCLPLLVQMPFLIAIYWAL 120
Query: 208 SNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPV 267
+ + + F W+PSL P + +LP+
Sbjct: 121 KDYPYDPNFVQ-FLWLPSLGDPDPMY------------------------------ILPI 149
Query: 268 LLVVSQYISVKIIQSSQN-NDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLS 326
L +S ++ + Q+S + + +T F+PL IGY +LS PSGL +YW +N+
Sbjct: 150 LSALSTWVMSR--QTSNGATGAAAQQQKIMTIFMPLFIGYISLSFPSGLVIYWVVSNVFQ 207
Query: 327 TAQQVWLQKFGGAK 340
QQ ++ K AK
Sbjct: 208 LIQQHFIYKNLNAK 221
>gi|302336556|ref|YP_003801762.1| YidC/Oxa1 family membrane protein insertase [Spirochaeta
smaragdinae DSM 11293]
gi|301633741|gb|ADK79168.1| membrane protein insertase, YidC/Oxa1 family [Spirochaeta
smaragdinae DSM 11293]
Length = 585
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 116/223 (52%), Gaps = 18/223 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLT++VK FP+T K ES+ M+ L P++K IQ++Y + ++ E A LYK
Sbjct: 377 WGVAIILLTILVKVVLFPITHKSYESTSKMQMLQPKMKEIQDKYRDNPNKMNQEMAELYK 436
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF--WIPSLAGPTTIAARQNG 238
+NP+ GCLP L +P++I +Y + D L F WI L+ P ++ +
Sbjct: 437 REKVNPMGGCLPMLLQMPMFIAMYGLFNKYFD--LRGSSFIPGWITDLSSPESVYS---- 490
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTN 298
PF P LGWSD +LP+ V + +S K+ QS + S + +T
Sbjct: 491 -----FAPF--KIPILGWSDI---RLLPMFFVATMILSSKMTQSPSSAGSQNSSMKMMTY 540
Query: 299 FLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKD 341
+P+ +F + PSGL +YW N+L+ QQ + K K+
Sbjct: 541 MMPIFFFFFLYNAPSGLLVYWIVTNVLTIGQQKAISKIQKRKE 583
>gi|116750023|ref|YP_846710.1| 60 kDa inner membrane insertion protein [Syntrophobacter
fumaroxidans MPOB]
gi|166977422|sp|A0LLH3.1|YIDC_SYNFM RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|116699087|gb|ABK18275.1| protein translocase subunit yidC [Syntrophobacter fumaroxidans
MPOB]
Length = 553
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 136/283 (48%), Gaps = 37/283 (13%)
Query: 54 NSADGVKELLGVAERLLFTLADAAVSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMS 113
N K + + L TLA A + AV + W + I + VL
Sbjct: 305 NETKSFKLRFYIGPKELSTLARAEHQLASAV-----DYGWFTFIAKPLVYVLDWF----- 354
Query: 114 TLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQL 173
+ +G AIILLT+++K +PLT+K +S M+ + P++ I+E+Y GD+E++
Sbjct: 355 -YRYTHNWGVAIILLTIVIKILFWPLTQKSYQSMQKMKKIQPKMTQIREKYKGDREKMNQ 413
Query: 174 ETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF-FWIPSLAGPTTI 232
E LY+ +NP+ GCLP L IPV+ LYR L+ + L E F WI L P +
Sbjct: 414 ELMGLYRTYKVNPMGGCLPMLLQIPVFFALYRMLNGAVE--LRHEPFMLWIDDLTAPDRL 471
Query: 233 AARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKS 292
I + P++ G P VL +L+ ++ +I K+ S+ DP
Sbjct: 472 P-------IGFDIPYLGGLP-----------VLTLLMGITMFIQQKMTPSA--GDPR--- 508
Query: 293 SQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+ +P+M F ++ PSGL LYW NN+LS AQQ W+ +
Sbjct: 509 QDQIMMIMPVMFTVFFVNFPSGLVLYWLVNNVLSIAQQYWVNR 551
>gi|312623586|ref|YP_004025199.1| membrane protein insertase, yidc/oxa1 family [Caldicellulosiruptor
kronotskyensis 2002]
gi|312204053|gb|ADQ47380.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor
kronotskyensis 2002]
Length = 341
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 123/260 (47%), Gaps = 28/260 (10%)
Query: 90 NSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMA 149
N WL + + +LK + D + H+P +YG AIILLT+IV+ PL KQ++S+
Sbjct: 2 NPTWLDFLAIPLGRLLKFIYDFLHGAHIPGSYGIAIILLTLIVRGLLLPLYIKQIQSTSK 61
Query: 150 MRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSN 209
M +AP+++ IQ++Y DQ+++Q E +LY+ G NP GC P L IP+ LY N
Sbjct: 62 MAEVAPRLQEIQQKYKNDQKKMQEEMLKLYQETGYNPAGGCWPLLIQIPILFSLYYVFQN 121
Query: 210 VADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTF--------A 261
L + + G T Q V+ LG F
Sbjct: 122 PLVYVLGKSHQYVKDLITGATGYNITQR---------IVNEAQKLGLDMHFFGINLAQKE 172
Query: 262 YLVLPVLLVVSQYISVKIIQSSQNN-DPNMKSSQ----------ALTNFLPLMIGYFALS 310
+VLP+L V ++S+ +SQ +P SSQ +L F PLM + AL
Sbjct: 173 LIVLPILSAVFSFLSILYSMNSQKKFNPQYSSSQTNAMAEGMNRSLMIFSPLMSYFIALQ 232
Query: 311 VPSGLSLYWFTNNLLSTAQQ 330
VPSGL LYW +NL QQ
Sbjct: 233 VPSGLVLYWTVSNLFQILQQ 252
>gi|424783443|ref|ZP_18210279.1| Inner membrane protein translocase component YidC, long form
[Campylobacter showae CSUNSWCD]
gi|421958674|gb|EKU10290.1| Inner membrane protein translocase component YidC, long form
[Campylobacter showae CSUNSWCD]
Length = 520
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 130/270 (48%), Gaps = 49/270 (18%)
Query: 74 ADAAVSSSDAVTTTKQNSD--------WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAI 125
A + + D T ++ N + W + I M L +L + +G+AI
Sbjct: 280 AKGYIGAKDHATLSQINEELVDVIEYGWFTFIAKPMFVFLNLLYSYIGN------WGWAI 333
Query: 126 ILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGIN 185
++LT++++ FPLT K + S ++ LAP+VK +Q +Y GD +++ + LYK G N
Sbjct: 334 VVLTLVIRIVLFPLTYKGMLSMNKLKDLAPKVKELQAKYKGDPQKLNMHMMELYKKNGAN 393
Query: 186 PLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLF 245
P+ GCLP L IP++ +YR L N I A P I W+
Sbjct: 394 PMGGCLPILMQIPIFFAIYRVLLNA------------IELKAAP----------WILWIH 431
Query: 246 PFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIG 305
P Y VLP+L+ + ++ K+ ++ +DP + + FLPL+
Sbjct: 432 DLSVMDP---------YFVLPILMGATMFLQQKLTPTT-FSDP---MQEKIMKFLPLIFT 478
Query: 306 YFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+F ++ P+GL+LYWF NN+ S QQV++ K
Sbjct: 479 FFFVTFPAGLTLYWFVNNVCSVVQQVFVNK 508
>gi|222530703|ref|YP_002574585.1| 60 kDa inner membrane insertion protein [Caldicellulosiruptor
bescii DSM 6725]
gi|222457550|gb|ACM61812.1| 60 kDa inner membrane insertion protein [Caldicellulosiruptor
bescii DSM 6725]
Length = 341
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 123/260 (47%), Gaps = 28/260 (10%)
Query: 90 NSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMA 149
N WL + + +LK + D + H+P +YG AIILLT+IV+ PL KQ++S+
Sbjct: 2 NPTWLDFLAIPLGRLLKFIYDFLHGAHIPGSYGIAIILLTLIVRGLLLPLYIKQIQSTSK 61
Query: 150 MRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSN 209
M +AP+++ IQ++Y DQ+++Q E +LY+ G NP GC P L IP+ LY N
Sbjct: 62 MAEVAPRLQEIQQKYKNDQKKMQEEMLKLYQETGYNPAGGCWPLLIQIPILFSLYYVFQN 121
Query: 210 VADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTF--------A 261
L + + G T Q V+ LG F
Sbjct: 122 PLVYVLGKSHQYVKDLITGATGYNITQR---------IVNEAQKLGLDMHFFGINLAQKE 172
Query: 262 YLVLPVLLVVSQYISVKIIQSSQNN-DPNMKSSQ----------ALTNFLPLMIGYFALS 310
+VLP+L V ++S+ +SQ +P SSQ +L F PLM + AL
Sbjct: 173 LIVLPILSAVFSFLSILYSMNSQKKFNPQYSSSQTNAMAEGMNRSLMIFSPLMSYFIALQ 232
Query: 311 VPSGLSLYWFTNNLLSTAQQ 330
VPSGL LYW +NL QQ
Sbjct: 233 VPSGLVLYWTVSNLFQILQQ 252
>gi|238926593|ref|ZP_04658353.1| sporulation associated-membrane protein [Selenomonas flueggei ATCC
43531]
gi|238885539|gb|EEQ49177.1| sporulation associated-membrane protein [Selenomonas flueggei ATCC
43531]
Length = 224
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 127/245 (51%), Gaps = 36/245 (14%)
Query: 91 SDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAM 150
S+ + I ++++ +L S + +YGF IILLT+++K T+PLT KQV+S AM
Sbjct: 6 SNLFAPIIHILQVILGAFYSVTSAAGLE-SYGFPIILLTILIKLVTYPLTVKQVKSMKAM 64
Query: 151 RSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNV 210
+ + P++K IQE+Y D + +Q +T L++ AG+NPLAGCLP L +P+ +G+Y AL N
Sbjct: 65 QEIQPKMKKIQEKYKSDPQMLQQKTGELFREAGVNPLAGCLPLLVQMPILMGMYYALFNF 124
Query: 211 ADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLV 270
FFW+PS++ P Y +LPVL
Sbjct: 125 TFPSAEAAAFFWLPSMSEPD------------------------------PYYILPVLSA 154
Query: 271 VSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+ ++ K+ S + + +PL IG+ +L+ PSGL LYW T N++ QQ
Sbjct: 155 ATTFLQQKMTSSEMTGQ-----MKIMMTVMPLFIGWISLTFPSGLVLYWVTMNVVQIIQQ 209
Query: 331 VWLQK 335
W+ +
Sbjct: 210 WWMYR 214
>gi|78043134|ref|YP_358876.1| sporulation associated-membrane protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995249|gb|ABB14148.1| sporulation associated-membrane protein [Carboxydothermus
hydrogenoformans Z-2901]
Length = 223
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 112/216 (51%), Gaps = 34/216 (15%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+Y AII+LT+++K +PL Q++S M+ L P+++ IQ++Y D ++ Q LY
Sbjct: 26 SYALAIIMLTILIKIILYPLNHAQMKSMKVMQELQPKMQEIQKKYKNDPQKQQQALMELY 85
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
K G+NP++GCLP L +P+ I LYRAL N FFWI ++
Sbjct: 86 KEYGVNPMSGCLPMLIQLPILIALYRALYNFKYLNPAHAKFFWIANI------------- 132
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
S Y +LP+L ++ YI ++ +S NDPN K +
Sbjct: 133 -----------------SHKDPYFILPILAALTTYIQSRMTMTS-GNDPNQK---VMLYV 171
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+PLMIG+ A+S+P+GL +YW N++ QQ ++ +
Sbjct: 172 MPLMIGWIAMSLPAGLGIYWVVLNIMGIIQQYFVNQ 207
>gi|413932451|gb|AFW67002.1| hypothetical protein ZEAMMB73_957495 [Zea mays]
Length = 206
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 92/128 (71%), Gaps = 9/128 (7%)
Query: 280 IQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGA 339
+Q Q+NDPN + +QA+T FLPL+IGYFALSVPSGL LYW TNN+LSTAQQVWLQK GGA
Sbjct: 1 MQPPQSNDPNQQGAQAVTKFLPLLIGYFALSVPSGLRLYWLTNNILSTAQQVWLQKLGGA 60
Query: 340 KDPMKQFSD-IIKDERLDINK------SVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIR 392
K+P+K++ D + ++E + K S P +K + Q K + GP+ GE+F++++
Sbjct: 61 KNPVKEYIDKLSREETTTVQKNDSTVQSEPLSKHSKPQPSQEPKPS--GPQRGERFRKLK 118
Query: 393 EQEARRRQ 400
E+E+ R++
Sbjct: 119 EEESMRKE 126
>gi|413932450|gb|AFW67001.1| hypothetical protein ZEAMMB73_957495 [Zea mays]
Length = 215
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 92/128 (71%), Gaps = 9/128 (7%)
Query: 280 IQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGA 339
+Q Q+NDPN + +QA+T FLPL+IGYFALSVPSGL LYW TNN+LSTAQQVWLQK GGA
Sbjct: 1 MQPPQSNDPNQQGAQAVTKFLPLLIGYFALSVPSGLRLYWLTNNILSTAQQVWLQKLGGA 60
Query: 340 KDPMKQFSD-IIKDERLDINK------SVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIR 392
K+P+K++ D + ++E + K S P +K + Q K + GP+ GE+F++++
Sbjct: 61 KNPVKEYIDKLSREETTTVQKNDSTVQSEPLSKHSKPQPSQEPKPS--GPQRGERFRKLK 118
Query: 393 EQEARRRQ 400
E+E+ R++
Sbjct: 119 EEESMRKE 126
>gi|34557650|ref|NP_907465.1| inner membrane protein translocase component YidC [Wolinella
succinogenes DSM 1740]
gi|38502880|sp|P60037.1|YIDC_WOLSU RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|34483367|emb|CAE10365.1| 60 KDA INNER-MEMBRANE PROTEIN [Wolinella succinogenes]
Length = 536
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 113/215 (52%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT++V+ FPLT K + S ++ +AP++K IQE+Y GD +++Q+ LYK
Sbjct: 339 WGWAIVLLTLVVRIILFPLTYKGMVSMQKLKDIAPKMKEIQEKYKGDPQKLQVHMMELYK 398
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NP+ GCLP L +P++ +YR L N + G
Sbjct: 399 KHGANPMGGCLPLLLQMPIFFAIYRVLYNAIEL-------------------------KG 433
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D L D Y +LP+L+ S ++ + ++ DP + + FL
Sbjct: 434 ADWILWIND----LSVMD--PYFILPILMGASMFLQQHLTPTT-FTDP---MQEKVFKFL 483
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ +F ++ PSGL LYWF +N+ S AQQ+++ K
Sbjct: 484 PLIFTFFFVTFPSGLVLYWFVSNVFSIAQQLFINK 518
>gi|323703944|ref|ZP_08115574.1| membrane protein insertase, YidC/Oxa1 family [Desulfotomaculum
nigrificans DSM 574]
gi|333924893|ref|YP_004498473.1| YidC/Oxa1 family membrane protein insertase [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323531102|gb|EGB21011.1| membrane protein insertase, YidC/Oxa1 family [Desulfotomaculum
nigrificans DSM 574]
gi|333750454|gb|AEF95561.1| membrane protein insertase, YidC/Oxa1 family [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 229
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 134/278 (48%), Gaps = 55/278 (19%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W I M ++ +L + VP +Y AII+LTVI+K A +PL+KKQ+ S + M+
Sbjct: 4 WFDYIKTGMTDLMNLLYGFTVQIGVP-SYALAIIILTVIIKMALYPLSKKQMRSMVMMQK 62
Query: 153 LAPQVKAIQERYAG-DQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVA 211
LAP++K IQ++Y G D +++Q LYK +NP+AGCLP L +P+ I LYRAL
Sbjct: 63 LAPEIKQIQDKYKGKDPQKMQQMIMELYKENNVNPMAGCLPLLIQMPILIALYRALYAFP 122
Query: 212 DEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVV 271
+ F W+ SL+ G PL +L
Sbjct: 123 FKNPAHAHFLWVESLSK--------------------TGDIPLA-----------ILAAA 151
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
+ Y+ ++ ++Q+ ++ + + +PL IG+ A +VP+GL+LYW N++ T QQ
Sbjct: 152 TTYLQSRLTTNTQD-----QTQRTMLYMMPLFIGWIAYTVPAGLALYWVVFNIVGTIQQ- 205
Query: 332 WLQKFGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKK 369
W I E L + + V G+ ++K
Sbjct: 206 WF----------------INKETLQLKEGVTGVEGSRK 227
>gi|393770890|ref|ZP_10359366.1| preprotein translocase subunit YidC [Novosphingobium sp. Rr 2-17]
gi|392723546|gb|EIZ80935.1| preprotein translocase subunit YidC [Novosphingobium sp. Rr 2-17]
Length = 613
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 117/213 (54%), Gaps = 17/213 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLT IV+ FP+ ++ +S +MR++ P++KAIQERY D+ R Q E LYK
Sbjct: 389 FGVAIILLTAIVRGMMFPVAQRGFKSMASMRAIQPKMKAIQERYKEDKARQQQEIMALYK 448
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+AGCLP + IPV+ LY+ L +A E FWI L+ P +
Sbjct: 449 SEKVNPMAGCLPMVLQIPVFFALYKTLM-LAIEMRHQPFVFWIKDLSAPDPLH------- 500
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I LF + PP A VL ++L V+ ++ K+ + Q DP S Q + N +
Sbjct: 501 ILNLFGLLPFTPP----SFLAIGVLALILGVTMFLQFKL--NPQQMDP---SQQQIMNLM 551
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P + + S SGL +YW T+N+L+ AQQ +L
Sbjct: 552 PWFMMFVMASFASGLLVYWITSNILAIAQQQYL 584
>gi|242310495|ref|ZP_04809650.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
gi|239522893|gb|EEQ62759.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
Length = 538
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 112/215 (52%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PLT K + S ++ LAP++K IQ++Y G+ +++Q LYK
Sbjct: 336 WGWAIILLTLIVRIILYPLTYKGMVSMQKLKDLAPKMKEIQQKYKGEPQKLQAHMMDLYK 395
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NP+ GCLP L +PV+ +YR L N + G
Sbjct: 396 KHGANPMGGCLPLLLQMPVFFAIYRVLYNAIE-------------------------LKG 430
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+WL D L D Y VLP+L+ ++ Y+ + ++ NDP + + FL
Sbjct: 431 AAWLLWIQD----LSVMD--PYFVLPILMGITMYLQQHLTPAT-FNDP---IQEKIFKFL 480
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ PSGL LYWF NN+ S QQ+ + K
Sbjct: 481 PLIFTIFFVTFPSGLVLYWFVNNIFSILQQLIINK 515
>gi|319957040|ref|YP_004168303.1| membrane protein insertase, yidc/oxa1 family [Nitratifractor
salsuginis DSM 16511]
gi|319419444|gb|ADV46554.1| membrane protein insertase, YidC/Oxa1 family [Nitratifractor
salsuginis DSM 16511]
Length = 535
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 113/215 (52%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+L T++VK FPL+ K + S ++ LAP++K I+E+Y D ++ + LYK
Sbjct: 340 WGWAIVLFTLLVKLVLFPLSYKGLLSMQKLKDLAPKMKEIKEKYKSDPAKMNQQMMALYK 399
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NP+ GCLP L IPV+ LYR L N ADE WI L+ RQ+
Sbjct: 400 KHGANPMGGCLPMLLQIPVFFALYRVLLN-ADELQGAPWILWIHDLS-------RQD--- 448
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
Y +LP+L+ V+ +I I ++ DP Q + +
Sbjct: 449 --------------------PYFILPILMGVTMFIQQHITPNTMT-DP---MQQKIFKWF 484
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P+++ +F L+ P+GL LYW TNN+LS AQQ ++ +
Sbjct: 485 PVIMTFFFLTFPAGLVLYWLTNNILSIAQQYYINR 519
>gi|94495881|ref|ZP_01302460.1| 60 kDa inner membrane insertion protein [Sphingomonas sp. SKA58]
gi|94424573|gb|EAT09595.1| 60 kDa inner membrane insertion protein [Sphingomonas sp. SKA58]
Length = 568
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 115/218 (52%), Gaps = 23/218 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII LT +V+A FP+ ++Q S AMR+L P++KA+QE++ D++++Q++ LYK
Sbjct: 359 FGVAIICLTFVVRAIMFPIAQRQFSSMAAMRALQPKMKALQEKHKDDKQQLQMKMMELYK 418
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPLAGCLP IP++ LY+ L + E WI L+ P +
Sbjct: 419 QEKVNPLAGCLPIFIQIPIFFALYKVLM-LTIEMRHQPFVLWIKDLSAPDPLHILN---- 473
Query: 241 ISWLFPFVDGHPPLGWSDTFAYL---VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALT 297
LF +D PP A+L VL +LL +S Y K+ + DP Q +
Sbjct: 474 ---LFGLLDFTPP-------AFLGIGVLALLLGISMYFQFKL--NPTQMDP---MQQQIM 518
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+P M+ + +GL +YW TNN LS AQQ WL +
Sbjct: 519 GIMPWMMMFIMAPFAAGLLVYWITNNCLSMAQQWWLYR 556
>gi|223039678|ref|ZP_03609964.1| inner membrane protein OxaA [Campylobacter rectus RM3267]
gi|222879061|gb|EEF14156.1| inner membrane protein OxaA [Campylobacter rectus RM3267]
Length = 520
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 130/270 (48%), Gaps = 49/270 (18%)
Query: 74 ADAAVSSSDAVTTTKQNSD--------WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAI 125
A + + D T ++ N + W + I M L +L + +G+AI
Sbjct: 280 AKGYIGAKDHATLSQINEELVDVIEYGWFTFIAKPMFAFLNLLYGYIGN------WGWAI 333
Query: 126 ILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGIN 185
++LT++++ FPLT K + S ++ LAP+VK +Q +Y GD +++ + LYK G N
Sbjct: 334 VVLTLVIRIVLFPLTYKGMLSMNKLKDLAPKVKELQAKYKGDPQKLNMHMMELYKKNGAN 393
Query: 186 PLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLF 245
P+ GCLP L IP++ +YR L N I A P I W+
Sbjct: 394 PMGGCLPILMQIPIFFAIYRVLLNA------------IELKAAP----------WILWIH 431
Query: 246 PFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIG 305
P Y VLP+L+ + ++ K+ ++ +DP + + FLPL+
Sbjct: 432 DLSVMDP---------YFVLPILMGATMFLQQKLTPTT-FSDP---MQEKIMKFLPLIFT 478
Query: 306 YFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+F ++ P+GL+LYWF NN+ S QQ+++ K
Sbjct: 479 FFFVTFPAGLTLYWFVNNVCSVIQQIFVNK 508
>gi|348025751|ref|YP_004765556.1| OxaA-like protein [Megasphaera elsdenii DSM 20460]
gi|341821805|emb|CCC72729.1| putative OxaA-like protein [Megasphaera elsdenii DSM 20460]
Length = 229
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 126/243 (51%), Gaps = 36/243 (14%)
Query: 93 WLSGITNVMETVLKVLKDGMS--TLHVPY-AYGFAIILLTVIVKAATFPLTKKQVESSMA 149
+ SGI +V+ ++ + T +V Y +YG AII+LT+I+K PLT KQ+ S
Sbjct: 3 FFSGIMDVLSGIMTTFMNYCYAFTQNVGYPSYGAAIIMLTLIIKLVLAPLTAKQIRSMEG 62
Query: 150 MRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSN 209
M++L P++K +Q++Y G+Q+++Q E +LY+ G+NPL+GCLP L +P I ++ AL
Sbjct: 63 MQTLQPKIKELQKKYKGNQKKMQEEMTKLYREMGVNPLSGCLPILIQMPFLIAIFYALRE 122
Query: 210 VADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLL 269
+ E F W+PSL P T+ ++PVL
Sbjct: 123 YPYDPAF-ESFLWLPSLGQP---------------------------DPTY---IMPVLS 151
Query: 270 VVSQYISVKIIQSSQ--NNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLST 327
VS Y + +Q +D K + + +PL IG+ +L+ PSGL +YW +N+
Sbjct: 152 AVSTYFIQNQMSGAQVAASDAQAKQQKIMKIVMPLFIGWISLNFPSGLVIYWVVSNVFQW 211
Query: 328 AQQ 330
AQQ
Sbjct: 212 AQQ 214
>gi|407789815|ref|ZP_11136914.1| 60 kDa inner membrane protein [Gallaecimonas xiamenensis 3-C-1]
gi|407206022|gb|EKE75985.1| 60 kDa inner membrane protein [Gallaecimonas xiamenensis 3-C-1]
Length = 538
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 110/215 (51%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+GFAIILLT+IV+ A +PLTK Q S MR+L P++ A++ERY D++R+ LYK
Sbjct: 351 WGFAIILLTLIVRGAMYPLTKAQYTSMAKMRALQPKLTALKERYGDDRQRMSQAMMELYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPL GC P L +P++I LY L ++ R
Sbjct: 411 KEKVNPLGGCFPLLLQMPIFIALYWVLQE---------------------SVELRHA--- 446
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
PF+ L D F VLPVL V+S +++ K +Q S DP Q + +
Sbjct: 447 -----PFMLWITDLSAKDPF--FVLPVLFVLSMWVTQK-LQPSTIADP---MQQKVMQLM 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P+M+G F PSGL LYW +NL+S QQ+ + K
Sbjct: 496 PVMMGAFFAFFPSGLVLYWLVSNLVSITQQLIIYK 530
>gi|335039143|ref|ZP_08532325.1| membrane protein insertase, YidC/Oxa1 family [Caldalkalibacillus
thermarum TA2.A1]
gi|334180953|gb|EGL83536.1| membrane protein insertase, YidC/Oxa1 family [Caldalkalibacillus
thermarum TA2.A1]
Length = 252
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 115/214 (53%), Gaps = 37/214 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++I+++TV+++ T PL KQ+++S M++L P++ ++E+Y DQ+R+Q E +L++
Sbjct: 64 YGWSIVIVTVLIRLLTLPLMVKQLKTSKVMQALQPEMVKLREKYQKDQQRLQQEMLKLFQ 123
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPLAGCLP L +P+ I Y A+ + +E + + F W+P L P
Sbjct: 124 KHNVNPLAGCLPVLVQMPILIAFYHAI--MRNEHIASHPFLWLPDLGNP----------- 170
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
D F +LPVL ++ Y+ K++ QNN Q L L
Sbjct: 171 -----------------DPFY--ILPVLAGLTTYLQQKMM-GMQNN----PQVQILMVIL 206
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
P+MIG FA+ PS LSLYW NL + Q +++
Sbjct: 207 PIMIGLFAIYFPSALSLYWVIGNLFTIVQTYFMR 240
>gi|169832372|ref|YP_001718354.1| 60 kDa inner membrane insertion protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169639216|gb|ACA60722.1| 60 kDa inner membrane insertion protein [Candidatus Desulforudis
audaxviator MP104C]
Length = 300
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 143/339 (42%), Gaps = 67/339 (19%)
Query: 104 VLKVLKDGMSTL-----HVPY-----AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSL 153
+ + L DGM+ L H+ +YG AI+LLT+++K PLT+ Q+ S M L
Sbjct: 1 MFEALIDGMTALINWLYHITVGVGLPSYGIAIVLLTILIKIFLHPLTRIQMRSMAKMSQL 60
Query: 154 APQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADE 213
P++KAIQ+RY D++++Q + LYK +NP+AGCL L +P I LY+AL N
Sbjct: 61 QPEIKAIQDRYGKDKQQMQTKIMELYKERKVNPMAGCLLLLVQLPFMIALYQALWNFDYV 120
Query: 214 GLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQ 273
GF W+ L T +LPVL V+
Sbjct: 121 NPAHAGFLWVADL------------------------------KKTDPLYILPVLAAVTT 150
Query: 274 YISVKIIQSSQNNDPNMKSSQ---ALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
++ K+ S N Q + +PL IG + ++P+GLS+YW T NL+S QQ
Sbjct: 151 FVQFKLTMSVSKGGGNPSQEQMQKVMLTVMPLFIGGISATLPAGLSVYWVTFNLVSIVQQ 210
Query: 331 VWLQKFGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQ 390
+ INK + S ++ R+ G +
Sbjct: 211 FF------------------------INKQILADQSAMEQQREKAARVVSGAVAEAGAQA 246
Query: 391 IREQEARRRQQREEEKRKAAEAAAKGNQTINGEQEREAS 429
E A +R + R EA A+G ++ G + E S
Sbjct: 247 SAELPAVKRPTTADPARTKKEAGARGKRSKEGAVQGEGS 285
>gi|441505625|ref|ZP_20987607.1| Inner membrane protein translocase component YidC, long form
[Photobacterium sp. AK15]
gi|441426708|gb|ELR64188.1| Inner membrane protein translocase component YidC, long form
[Photobacterium sp. AK15]
Length = 537
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 152/326 (46%), Gaps = 53/326 (16%)
Query: 6 SIHQNLILSPFPNRTDIQTPLFTRTHFGLKPFLRGSICVAKFGLR-PDPNSADGVKELLG 64
++ Q+ +S + T T L+TRT GL G+R P A G ++ LG
Sbjct: 249 AMMQHYFVSAWIPNTQGATNLYTRTGNGL----------GYIGIRMPAATVAPGAEQTLG 298
Query: 65 VAERLLFTLADAAVSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFA 124
+ L D +++ + T + WL I + + T+L ++ + +G A
Sbjct: 299 ATLWVGPKLQDQMEATAPNLNLTV-DYGWLWFIASPLHTLLSFIQG------IVVNWGVA 351
Query: 125 IILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGI 184
II+LT IV+ A +PLTK Q S MR L P+++A++ER D++R+ E LYK +
Sbjct: 352 IIILTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERLGDDRQRMSQEMMELYKKEKV 411
Query: 185 NPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWL 244
NPL GCLP L +P++I LY +L E T F WI L+
Sbjct: 412 NPLGGCLPILVQMPIFIALYWSLMESV-ELRHTPFFGWIHDLSAQD-------------- 456
Query: 245 FPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMI 304
Y +LPVL+ V+ ++ ++ + + DP Q + F+P+M
Sbjct: 457 ----------------PYFILPVLMGVTMFM-IQKMSPTTVTDP---MQQKIMTFMPVMF 496
Query: 305 GYFALSVPSGLSLYWFTNNLLSTAQQ 330
+F L PSGL LYW +N+++ QQ
Sbjct: 497 TFFFLWFPSGLVLYWLVSNIVTLIQQ 522
>gi|238018226|ref|ZP_04598652.1| hypothetical protein VEIDISOL_00050 [Veillonella dispar ATCC 17748]
gi|237864697|gb|EEP65987.1| hypothetical protein VEIDISOL_00050 [Veillonella dispar ATCC 17748]
Length = 222
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 112/216 (51%), Gaps = 32/216 (14%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YG AIILLT+++KA PLT KQ++S AM+ L P++K +Q++Y D ++Q E LY
Sbjct: 33 SYGVAIILLTIVIKAILAPLTVKQIKSMKAMQELQPRMKELQDKYKNDPAKLQAEMGALY 92
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
K G+NPLAGCLP L +P I ++ AL + + F W+PSL P +
Sbjct: 93 KEMGVNPLAGCLPLLVQMPFLIAIFYALQGYPYDQNYVQ-FLWLPSLGEPDPMY------ 145
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
+LPVL S +I K SS + + + +T F
Sbjct: 146 ------------------------ILPVLSAASTWIMSKQ-TSSGASGAAAQQQKIMTIF 180
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+PL IGY +L+ PSGL +YW +N+ QQ ++ K
Sbjct: 181 MPLFIGYISLNFPSGLVIYWIVSNVFQFVQQHFIYK 216
>gi|384172914|ref|YP_005554291.1| putative inner membrane protein translocase component [Arcobacter
sp. L]
gi|345472524|dbj|BAK73974.1| putative inner membrane protein translocase component [Arcobacter
sp. L]
Length = 524
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 120/243 (49%), Gaps = 41/243 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M +L+ ++ + +G+ I++LT+++K +PL+ K + S ++
Sbjct: 313 WFTFIAKPMFLLLQFIQGYIGN------WGWTIVILTILIKLVLYPLSYKGMVSMQKLKD 366
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K IQ RY D+++ + LYK G NP+ GCLP + IPV+ +YR L N +
Sbjct: 367 LAPKMKEIQARYKDDKQKQSMHMMELYKKHGANPMGGCLPLILQIPVFFAIYRVLLNAIE 426
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
+G W I W+ + P Y VLP+L+ +
Sbjct: 427 ----LKGAPW------------------ILWVHDLAEMDP---------YFVLPILMGAT 455
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
Y+ KI ++ ++ K Q FLP++ +F L P+GL+LYWF NNL + QQ +
Sbjct: 456 MYLQQKITPNTMQDEMQKKIFQ----FLPVVFTFFFLWFPAGLTLYWFINNLFTIGQQYY 511
Query: 333 LQK 335
+ K
Sbjct: 512 INK 514
>gi|372267019|ref|ZP_09503067.1| inner membrane protein, 60 kDa [Alteromonas sp. S89]
Length = 551
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 158/340 (46%), Gaps = 56/340 (16%)
Query: 5 LSIHQNLILSPF-PNRTDIQTPLFTRTHFGLKPFLRG--SICVAKFGLRPDPNSADGVKE 61
+++ Q+ LS + PN+ D+ T F L P G S+ LR +P V
Sbjct: 264 VAMVQHYFLSAWIPNQQDLNT-------FTLAPIGNGLFSMGFTSPQLRIEPGQQGTVAA 316
Query: 62 LLGVAERLLFTLADAAVSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAY 121
V + ++ L + +S +T + WL + M VL + + H+ +
Sbjct: 317 DFYVGPKDVYRLEE--ISPYLDLTV---DYGWLWWLAKPMFRVLHWIHE-----HLVANW 366
Query: 122 GFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKL 181
G+AIILLTV +KA +PL+ ++S MR APQ+K +QE+Y +++++ ET +LY+
Sbjct: 367 GWAIILLTVFIKALLYPLSAAGLKSMARMRKFAPQMKKLQEQYKDNRQKLAEETMKLYRR 426
Query: 182 AGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGI 241
INP+ GCLP L +PV+IGLY L + ++ I
Sbjct: 427 EKINPVGGCLPILLQMPVFIGLYWMLMETVE----------------------LRHAPWI 464
Query: 242 SWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLP 301
W+ P Y +LP+++ S ++ K+ Q DP + + +P
Sbjct: 465 GWIHDLSVKDP---------YFILPLIMGASMWLMQKL--QPQPTDP---TQAKIMQLMP 510
Query: 302 LMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKD 341
+M+ +F L P+GL LYW NNL+S AQ ++ K A D
Sbjct: 511 IMMTFFFLWFPAGLVLYWIANNLISIAQTWFINKQVEAAD 550
>gi|290968158|ref|ZP_06559703.1| stage III sporulation protein J family protein [Megasphaera
genomosp. type_1 str. 28L]
gi|335049898|ref|ZP_08542881.1| membrane protein insertase, YidC/Oxa1 family [Megasphaera sp. UPII
199-6]
gi|290781833|gb|EFD94416.1| stage III sporulation protein J family protein [Megasphaera
genomosp. type_1 str. 28L]
gi|333762027|gb|EGL39543.1| membrane protein insertase, YidC/Oxa1 family [Megasphaera sp. UPII
199-6]
Length = 223
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 125/241 (51%), Gaps = 36/241 (14%)
Query: 94 LSGITNVMETVLKVLKDGMSTLHVPY-AYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
+S +T +M T L T H+ Y +YG AII+LT+I+K PLT KQ++S M+
Sbjct: 6 ISPLTYIMSTFLTYCYT--FTQHIGYPSYGAAIIMLTLIIKFILSPLTAKQIKSMQGMQV 63
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
+ P++K +Q++Y G+Q+++Q E +LYK G+NPL+GCLP + +P I ++ AL N
Sbjct: 64 IQPKIKELQKKYKGNQKKLQEEMRKLYKETGVNPLSGCLPIIIQMPFLISIFYALRNYPY 123
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
+ E F W+PSL P VLPVL +S
Sbjct: 124 DPHF-ESFLWLPSLGSPDPTH------------------------------VLPVLSALS 152
Query: 273 QYISVKIIQSSQNNDPNMKSSQ--ALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
++ K + +Q + ++SQ + +PL IG+ + PSGL +YW +N+ AQQ
Sbjct: 153 TFLIQKQMTGAQVTEGEGQASQQKIMQIVMPLFIGWISWRFPSGLVIYWVLSNVFQWAQQ 212
Query: 331 V 331
+
Sbjct: 213 M 213
>gi|398343947|ref|ZP_10528650.1| preprotein translocase, YidC subunit [Leptospira inadai serovar
Lyme str. 10]
Length = 619
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 117/213 (54%), Gaps = 24/213 (11%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YGF IIL ++ K +PL +KQ ES M +L+P++K I E+YA D E+ Q + LYK
Sbjct: 413 YGFGIILFALLFKLVFYPLNQKQAESMKKMSALSPELKKINEKYAKDPEKRQQKMMELYK 472
Query: 181 LAGINPLA---GCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQN 237
+NPL+ GCLP L +P++ LY A ++ D L F WI L+ P +
Sbjct: 473 KHNMNPLSQLGGCLPMLIQLPIFFALYVAFADTID--LWKSPFLWIKDLSEPDFV----- 525
Query: 238 GSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALT 297
W P + P D + +L +L+V +Q++S+++ ++ DPN K +
Sbjct: 526 -----WTSPAI----PFLTKDGLSLNLLVLLMVGTQFVSMRL--TTVPTDPNQK---MMM 571
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL++ +F S+PSGL+LYW NLLS AQQ
Sbjct: 572 YVMPLIMVFFLWSMPSGLTLYWTVTNLLSIAQQ 604
>gi|326386366|ref|ZP_08207989.1| putative inner membrane protein translocase component YidC
[Novosphingobium nitrogenifigens DSM 19370]
gi|326209027|gb|EGD59821.1| putative inner membrane protein translocase component YidC
[Novosphingobium nitrogenifigens DSM 19370]
Length = 606
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 131/250 (52%), Gaps = 25/250 (10%)
Query: 113 STLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQ 172
S H +G AIILLT+IV+ FP+ ++Q S AMR++ P++KAIQERY D+ R Q
Sbjct: 367 SLFHAVKNFGIAIILLTLIVRGIMFPVAQRQFASMAAMRAIQPKMKAIQERYKDDKPRQQ 426
Query: 173 LETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF-FWIPSLAGPTT 231
E LYK G+NPLAGCLP IPV+ LY+ L V + + F WI L+ P
Sbjct: 427 QEIMALYKEEGVNPLAGCLPMFLQIPVFFALYKVL--VLTIEMRHQPFALWIHDLSSPDP 484
Query: 232 IAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMK 291
N G L PF P G F VL +LL + ++ K+ ++ DP
Sbjct: 485 THLL-NLFG---LLPFT----PTG---MFGIGVLALLLGATMWLQFKLQPAAM--DP--- 528
Query: 292 SSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIK 351
S Q + +P M+ + + SGL +YW T+NLL+ AQQ +L ++ P Q
Sbjct: 529 SQQQVMAIMPWMMMFVMSTFASGLLIYWITSNLLTIAQQRYLY----SRHP--QLKAQAT 582
Query: 352 DERLDINKSV 361
+++DI++ V
Sbjct: 583 KDQVDIDRQV 592
>gi|256823857|ref|YP_003147820.1| 60 kDa inner membrane insertion protein [Kangiella koreensis DSM
16069]
gi|256797396|gb|ACV28052.1| 60 kDa inner membrane insertion protein [Kangiella koreensis DSM
16069]
Length = 536
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 109/215 (50%), Gaps = 34/215 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIIL+T++VKA +PL+ Q S MR LAP+++ ++ERY D++R+Q E ++YK
Sbjct: 345 WGLAIILVTLVVKALLYPLSAAQYRSMANMRKLAPKMQQLKERYGEDKQRMQQEMMKMYK 404
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NP GCLP + P++I LY L + ++
Sbjct: 405 DEGANPFGGCLPMILQFPIFIALYYVLFEAVE----------------------LRHAPF 442
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
++W+ P Y VLP+L+ S ++ K+ S DP Q + ++L
Sbjct: 443 VAWIQDLSVADP---------YFVLPLLMGGSMWLMQKLQPQSPTMDP---MQQKIMSYL 490
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++ F L P+GL LYW NNL+S AQQ ++ K
Sbjct: 491 PIVFTVFMLFFPAGLVLYWLCNNLISVAQQQYITK 525
>gi|398348970|ref|ZP_10533673.1| preprotein translocase, YidC subunit [Leptospira broomii str. 5399]
Length = 619
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 117/213 (54%), Gaps = 24/213 (11%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YGF IIL ++ K +PL +KQ ES M +L+P++K I E+YA D E+ Q + LYK
Sbjct: 413 YGFGIILFALLFKLVFYPLNQKQAESMKKMSALSPELKKINEKYAKDPEKRQQKMMELYK 472
Query: 181 LAGINPLA---GCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQN 237
+NPL+ GCLP L +P++ LY A ++ D L F WI L+ P +
Sbjct: 473 KHNMNPLSQLGGCLPMLIQLPIFFALYVAFADTID--LWKSPFLWIRDLSEPDFV----- 525
Query: 238 GSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALT 297
W P + P D + +L +L+V +Q++S+++ ++ DPN K +
Sbjct: 526 -----WTSPAI----PFLTKDGLSLNLLVLLMVGTQFVSMRL--TTVPTDPNQK---MMM 571
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL++ +F S+PSGL+LYW NLLS AQQ
Sbjct: 572 YVMPLIMVFFLWSMPSGLTLYWTVTNLLSIAQQ 604
>gi|384412415|ref|YP_005621780.1| YidC/Oxa1 family membrane protein insertase [Zymomonas mobilis
subsp. mobilis ATCC 10988]
gi|335932789|gb|AEH63329.1| membrane protein insertase, YidC/Oxa1 family domain containing
[Zymomonas mobilis subsp. mobilis ATCC 10988]
Length = 579
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 125/245 (51%), Gaps = 23/245 (9%)
Query: 92 DWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMR 151
DW G ++E V D + LHV YG AIIL+ ++A FP+ KQ S +MR
Sbjct: 335 DW--GWFAIIEKVFFYYLDWL-FLHVG-NYGLAIILMVFTIRALIFPIANKQYASMASMR 390
Query: 152 SLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVA 211
L P+++A++ERY D+ R++ E LY+ +NP AGCLP P++I LY+ L V
Sbjct: 391 RLQPKMQAVRERYKNDEARMRQELVTLYQKEKVNPFAGCLPMFIQFPIFIALYKTLL-VT 449
Query: 212 DEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYL-VLPVLLV 270
E WI L+ P + LF + PP F + VLP++L
Sbjct: 450 IESRHQPFILWIKDLSAPDPLTPFN-------LFGLLHFTPP-----HFLMIGVLPIILG 497
Query: 271 VSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
++ ++ + S Q +P + Q + +FLPL+ F + +GL +Y+ NNL+S AQ
Sbjct: 498 ITMWLQFR--ASPQQLEP---AQQQIMSFLPLISVIFMAPLAAGLQVYYIFNNLISLAQM 552
Query: 331 VWLQK 335
+WLQ
Sbjct: 553 MWLQH 557
>gi|312136222|ref|YP_004003560.1| membrane protein insertase, yidc/oxa1 family [Caldicellulosiruptor
owensensis OL]
gi|311776273|gb|ADQ05760.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor
owensensis OL]
Length = 341
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 120/260 (46%), Gaps = 28/260 (10%)
Query: 90 NSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMA 149
N W + + +LK++ D + H+P +YG A+ILLT+IV+ PL KQ+ S
Sbjct: 2 NPTWFDFLAIPLGRLLKLIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIHSMSK 61
Query: 150 MRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSN 209
M +AP+++ IQ++Y DQ+++Q E +LY+ G NP AGC P L +P+ LY N
Sbjct: 62 MAEVAPRLQEIQQKYKNDQKKLQEEMLKLYQETGYNPAAGCWPLLIQMPILFSLYYVFQN 121
Query: 210 VADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTF--------A 261
L + + G T A Q VD LG F
Sbjct: 122 PLVYVLGKSHQYVKDLVTGATGYAITQR---------IVDEAQKLGLDMHFLGINLAKKE 172
Query: 262 YLVLPVLLVVSQYISVKIIQSSQNN-DPNMKSSQ----------ALTNFLPLMIGYFALS 310
LVLP+L + +SV +SQ +P SQ + F PLM + AL
Sbjct: 173 LLVLPILSAATMLLSVWFSSNSQKKFNPQYSQSQSNAMAESINKSFMIFSPLMSYFIALQ 232
Query: 311 VPSGLSLYWFTNNLLSTAQQ 330
VPSGL LYW NL + QQ
Sbjct: 233 VPSGLVLYWTVTNLFTILQQ 252
>gi|397690139|ref|YP_006527393.1| preprotein translocase subunit YidC [Melioribacter roseus P3M]
gi|395811631|gb|AFN74380.1| Preprotein translocase subunit YidC [Melioribacter roseus P3M]
Length = 647
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 123/235 (52%), Gaps = 29/235 (12%)
Query: 112 MSTLH--VPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQE 169
M LH +P YGF IILL++IVK A PLTK+ ++S M+ L P++ ++E+Y D +
Sbjct: 379 MKFLHQFIP-NYGFVIILLSIIVKFALHPLTKQSMKSMKKMQLLQPKINELKEKYKDDPQ 437
Query: 170 RIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGP 229
R+Q ET +LY GINP+ GC P L +P+ I L+ +L NVA + WI +L+ P
Sbjct: 438 RVQKETMKLYSTYGINPMGGCFPMLLQMPILIALW-SLFNVAIDIRQQPFILWIDNLSAP 496
Query: 230 TTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPN 289
I + PF P+ D + L L LL V+ ++ Q DP
Sbjct: 497 DVI----------FKLPF---KVPIFNIDVVSGLAL--LLGVTMFLQ----QKQSVRDP- 536
Query: 290 MKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMK 344
S +AL +P+M + PSGL+LY+F NLLS QQ ++ KD M+
Sbjct: 537 --SQKALVYIMPVMFTLMFMGFPSGLNLYYFMFNLLSIVQQYYINH---KKDDME 586
>gi|260753817|ref|YP_003226710.1| inner membrane protein translocase component YidC [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258553180|gb|ACV76126.1| 60 kDa inner membrane insertion protein [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 579
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 125/245 (51%), Gaps = 23/245 (9%)
Query: 92 DWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMR 151
DW G ++E V D + LHV YG AIIL+ ++A FP+ KQ S +MR
Sbjct: 335 DW--GWFAIIEKVFFYYLDWL-FLHVG-NYGLAIILMVFTIRALIFPIANKQYASMASMR 390
Query: 152 SLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVA 211
L P+++A++ERY D+ R++ E LY+ +NP AGCLP P++I LY+ L V
Sbjct: 391 RLQPKMQAVRERYKNDEARMRQELVTLYQKEKVNPFAGCLPMFIQFPIFIALYKTLL-VT 449
Query: 212 DEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYL-VLPVLLV 270
E WI L+ P + LF + PP F + VLP++L
Sbjct: 450 IESRHQPFILWIKDLSAPDPLTPFN-------LFGLLHFTPP-----HFLMIGVLPIILG 497
Query: 271 VSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
++ ++ + S Q +P + Q + +FLPL+ F + +GL +Y+ NNL+S AQ
Sbjct: 498 ITMWLQFR--ASPQQLEP---AQQQIMSFLPLISVIFMAPLAAGLQVYYIFNNLISLAQM 552
Query: 331 VWLQK 335
+WLQ
Sbjct: 553 MWLQH 557
>gi|429736483|ref|ZP_19270380.1| stage III sporulation protein J family protein [Selenomonas sp.
oral taxon 138 str. F0429]
gi|429155005|gb|EKX97709.1| stage III sporulation protein J family protein [Selenomonas sp.
oral taxon 138 str. F0429]
Length = 223
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 116/216 (53%), Gaps = 35/216 (16%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YGF IILLT+++K T+PLT KQV+S AM+ + P++K IQE+Y + + +Q +T L+
Sbjct: 34 SYGFPIILLTILIKLVTYPLTVKQVKSMKAMQEIQPKMKKIQEKYKNNPQMLQQKTGELF 93
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+ AG+NPLAGCLP L +P+ +G+Y AL N FFW+P+++ P +
Sbjct: 94 REAGVNPLAGCLPLLVQMPILMGMYYALFNFTFPSPEAATFFWLPNMSEPDPLY------ 147
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
+LPVL + Y+ K+ + N + +
Sbjct: 148 ------------------------ILPVLSAATTYLQQKMTSTEMNAQ-----MKIMMTV 178
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+PL IG+ +L PSGL LYW T N++ AQQ W+ +
Sbjct: 179 MPLFIGWISLKFPSGLVLYWVTMNVVQIAQQWWMYR 214
>gi|56552522|ref|YP_163361.1| inner membrane protein translocase component YidC [Zymomonas
mobilis subsp. mobilis ZM4]
gi|59803051|sp|Q9RNL5.2|YIDC_ZYMMO RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|56544096|gb|AAV90250.1| YidC translocase/secretase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 579
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 125/245 (51%), Gaps = 23/245 (9%)
Query: 92 DWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMR 151
DW G ++E V D + LHV YG AIIL+ ++A FP+ KQ S +MR
Sbjct: 335 DW--GWFAIIEKVFFYYLDWL-FLHVG-NYGLAIILMVFTIRALIFPIANKQYASMASMR 390
Query: 152 SLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVA 211
L P+++A++ERY D+ R++ E LY+ +NP AGCLP P++I LY+ L V
Sbjct: 391 RLQPKMQAVRERYKNDEARMRQELVTLYQKEKVNPFAGCLPMFIQFPIFIALYKTLL-VT 449
Query: 212 DEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYL-VLPVLLV 270
E WI L+ P + LF + PP F + VLP++L
Sbjct: 450 IESRHQPFILWIKDLSAPDPLTPFN-------LFGLLHFTPP-----HFLMIGVLPIILG 497
Query: 271 VSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
++ ++ + S Q +P + Q + +FLPL+ F + +GL +Y+ NNL+S AQ
Sbjct: 498 ITMWLQFR--ASPQQLEP---AQQQIMSFLPLISVIFMAPLAAGLQVYYIFNNLISLAQM 552
Query: 331 VWLQK 335
+WLQ
Sbjct: 553 MWLQH 557
>gi|57242374|ref|ZP_00370313.1| 60 kDa inner-membrane protein [Campylobacter upsaliensis RM3195]
gi|57017054|gb|EAL53836.1| 60 kDa inner-membrane protein [Campylobacter upsaliensis RM3195]
Length = 537
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 109/213 (51%), Gaps = 36/213 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI++LT+IV+ FPLT K + S ++ LAP++K I+ERY GD +++ + LYK
Sbjct: 343 WGWAIVVLTLIVRVILFPLTYKSMISMNKLKDLAPKMKEIRERYKGDPQKMNMHMMELYK 402
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NP++GCLP L IP++ +YR L N A E FWI L+
Sbjct: 403 KHGANPMSGCLPILLQIPIFFAIYRVLFN-AIELKDAPWIFWIQDLSAMD---------- 451
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
Y +LP+L+ + ++ ++I DP + FL
Sbjct: 452 --------------------PYFILPILMGATMFLQ-QLITPMTIQDP---LQAKIMKFL 487
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P++ F ++ P+GL+LYWF NNL S QQ W+
Sbjct: 488 PVIFTIFFITFPAGLTLYWFINNLCSLLQQ-WI 519
>gi|359398647|ref|ZP_09191663.1| preprotein translocase subunit YidC [Novosphingobium
pentaromativorans US6-1]
gi|357599885|gb|EHJ61588.1| preprotein translocase subunit YidC [Novosphingobium
pentaromativorans US6-1]
Length = 586
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 115/213 (53%), Gaps = 17/213 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLT+IV+ FP+ ++Q S AMR++ P++KA+QERY D+++ Q E +LYK
Sbjct: 368 FGVAIILLTLIVRGIMFPIAQRQFASMAAMRAIQPKMKALQERYKDDKQKQQQEVMKLYK 427
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G+NPLAGCLP IPV+ LY+ L +A E WI L+ P +
Sbjct: 428 EEGVNPLAGCLPMFLQIPVFFALYKTLI-LAIEMRHQPFVLWIKDLSAPDPLHILN---- 482
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
LF + PP A VL +LL ++ ++ K+ + DP + Q + +
Sbjct: 483 ---LFGLLPFDPP----GFLAIGVLALLLGITMFLQFKL--NPAQMDP---TQQQIFMIM 530
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P + + SGL +YW T+NLL+ AQQ +L
Sbjct: 531 PWFMMFIMAPFASGLLVYWITSNLLTIAQQKFL 563
>gi|301064543|ref|ZP_07204939.1| putative membrane protein [delta proteobacterium NaphS2]
gi|300441291|gb|EFK05660.1| putative membrane protein [delta proteobacterium NaphS2]
Length = 551
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 127/242 (52%), Gaps = 26/242 (10%)
Query: 96 GITNVM-ETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLA 154
G T+++ + +L VLK + LH YG +IILLT++VK +PLT K +S M+ L
Sbjct: 331 GWTDIIAKPLLYVLKFFDAYLH---NYGVSIILLTILVKILFWPLTHKSYKSMKEMQKLQ 387
Query: 155 PQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEG 214
P++ ++E+Y GD++++ E LYK +NP+ GCLP + IPV+ L+R L +
Sbjct: 388 PRMAKLREKYKGDKQKLNQEMMALYKTYKVNPMGGCLPMVVQIPVFFALFRVLGACIE-- 445
Query: 215 LLTEGF-FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQ 273
L F FWI L+ P + S+ PF+ PP G VL +L+ S
Sbjct: 446 LRHAPFIFWINDLSAPDRLFH------FSFQIPFM--APPYGIP------VLTLLMGASM 491
Query: 274 YISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
+I K+ S P + + FLP++ + ++ PSGL LYW NNLLS QQ +
Sbjct: 492 FIQQKMTPS-----PGDPAQAKIMMFLPVIFTFMFINFPSGLVLYWLVNNLLSIGQQYRI 546
Query: 334 QK 335
K
Sbjct: 547 YK 548
>gi|269792319|ref|YP_003317223.1| 60 kDa inner membrane insertion protein [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269099954|gb|ACZ18941.1| 60 kDa inner membrane insertion protein [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 268
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 124/226 (54%), Gaps = 20/226 (8%)
Query: 117 VPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETA 176
+ ++YG +II+LTV+V+ PL+ KQ+ S M+ + P++K IQE+YA D+E++ E
Sbjct: 22 ITHSYGLSIIMLTVVVRILLHPLSHKQMVSMQKMQKIQPRIKVIQEKYANDKEKMNQEIM 81
Query: 177 RLYKLAGINPLAGCLPTLATIPVWIGLYRALSN--VADEGLLTEGFFWIPSLAGPTTIAA 234
+LY+ G+NP AGCLP L +P++I LYRAL N ++ L + + A
Sbjct: 82 QLYRENGVNPAAGCLPLLVQLPIFILLYRALINYDFSNTSFLGVNL-------SMSALGA 134
Query: 235 RQNGSGISWLFP----FVDG--HPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDP 288
N GIS P + G P G ++ Y +L+V+ +++ + S N+P
Sbjct: 135 MANALGISSAKPTFTAILSGILTNPAGLANVGVYAPSVILIVLVGFLTWYQQKMSSGNNP 194
Query: 289 NMKSSQALTN-FLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
M A N F+PL + + LS+P G+ +YW ++ +S AQQ W+
Sbjct: 195 QM----AFMNWFMPLFMSFICLSLPGGVMIYWGASSFISVAQQKWV 236
>gi|312794741|ref|YP_004027664.1| membrane protein insertase, yidc/oxa1 family [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181881|gb|ADQ42051.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 341
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 120/260 (46%), Gaps = 28/260 (10%)
Query: 90 NSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMA 149
N WL + + +LK + D + H+P +YG A+ILLT+IV+ PL KQ++S+
Sbjct: 2 NPTWLDFLAIPLGRLLKFIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIQSTSK 61
Query: 150 MRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSN 209
M +AP+++ IQ++Y DQ ++Q E +LY+ G NP GC P L P+ LY N
Sbjct: 62 MAEVAPRLQEIQQKYKNDQRKMQEEMLKLYQETGYNPAGGCWPLLIQAPILFALYYVFQN 121
Query: 210 VADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTF--------A 261
L + + G T A Q VD LG F
Sbjct: 122 PLVYVLGKSHQYVRDLITGATGYAITQR---------IVDEAQKLGLDMHFFGINLAQKE 172
Query: 262 YLVLPVLLVVSQYISVKIIQSSQNN-DPNMKSSQ----------ALTNFLPLMIGYFALS 310
+VLP+L ++S+ +SQ +P SQ +L F PLM + AL
Sbjct: 173 LIVLPILSAAFSFLSILYSMNSQKKFNPQYSQSQSNAMAESMNRSLMIFSPLMSYFIALQ 232
Query: 311 VPSGLSLYWFTNNLLSTAQQ 330
VPSGL LYW +NL QQ
Sbjct: 233 VPSGLVLYWTVSNLFQILQQ 252
>gi|5932359|gb|AAD56912.1|AF180145_4 60KD inner-membrane protein yidC [Zymomonas mobilis subsp. mobilis
ZM4]
Length = 579
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 125/245 (51%), Gaps = 23/245 (9%)
Query: 92 DWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMR 151
DW G ++E V D + LHV YG AIIL+ ++A FP+ KQ S +MR
Sbjct: 335 DW--GWFAIIEKVFFYYLDWL-FLHVG-NYGLAIILMVFTIRALIFPIANKQYASMASMR 390
Query: 152 SLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVA 211
L P+++A++ERY D+ R++ E LY+ +NP AGCLP P++I LY+ L V
Sbjct: 391 RLQPKMQAVRERYKNDEARMRQELVTLYQKEKVNPFAGCLPMFIQFPIFIALYKTLL-VT 449
Query: 212 DEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYL-VLPVLLV 270
E WI L+ P + LF + PP F + VLP++L
Sbjct: 450 IESRHQPFILWIKDLSAPDPLTPFN-------LFGLLHFTPP-----HFLMIGVLPIILG 497
Query: 271 VSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
++ ++ + S Q +P + Q + +FLPL+ F + +GL +Y+ NNL+S AQ
Sbjct: 498 ITMWLQFR--ASPQQLEP---AQQQIMSFLPLISVIFMAPLAAGLQVYYIFNNLISLAQM 552
Query: 331 VWLQK 335
+WLQ
Sbjct: 553 MWLQH 557
>gi|315638576|ref|ZP_07893750.1| inner membrane protein [Campylobacter upsaliensis JV21]
gi|315481200|gb|EFU71830.1| inner membrane protein [Campylobacter upsaliensis JV21]
Length = 537
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 109/213 (51%), Gaps = 36/213 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI++LT+IV+ FPLT K + S ++ LAP++K I+ERY GD +++ + LYK
Sbjct: 343 WGWAIVVLTLIVRVILFPLTYKSMISMNKLKDLAPKMKEIRERYKGDPQKMNMHMMELYK 402
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NP++GCLP L IP++ +YR L N A E FWI L+
Sbjct: 403 KHGANPMSGCLPILLQIPIFFAIYRVLFN-AIELKDAPWIFWIQDLSAMD---------- 451
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
Y +LP+L+ + ++ ++I DP + FL
Sbjct: 452 --------------------PYFILPILMGATMFLQ-QLITPMTIQDP---LQAKIMKFL 487
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P++ F ++ P+GL+LYWF NNL S QQ W+
Sbjct: 488 PVIFTIFFITFPAGLTLYWFINNLCSLLQQ-WI 519
>gi|310830139|ref|YP_003962496.1| 60 kDa inner membrane insertion protein [Eubacterium limosum
KIST612]
gi|308741873|gb|ADO39533.1| 60 kDa inner membrane insertion protein [Eubacterium limosum
KIST612]
Length = 307
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 119/233 (51%), Gaps = 41/233 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG A+IL T++VK PL KQ +S M++L P+++ +Q++Y + E++ ET +LYK
Sbjct: 22 YGVAVILFTILVKFCILPLNIKQTKSMREMQALQPELQKLQKKYKNNPEKLNQETMKLYK 81
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVA-------DEGLLTEGFFWIPSLAGPTTIA 233
L ++P+AGCLP L +P+ L+ AL + D +++ F WIP L P
Sbjct: 82 LYNVSPMAGCLPLLIQLPIIYALFGALRDPGKWVFTNGDVSAISQQFLWIPDLGNPD--- 138
Query: 234 ARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNN--DPNMK 291
+ +LP+L VV +I+ K S Q DP+ +
Sbjct: 139 ---------------------------PWYILPILCVVFTFITQKFTMSVQKGTMDPSAE 171
Query: 292 SSQALTNF-LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ-VWLQKFGGAKDP 342
+Q + + +P+ IG+ A+ +P+G++LYW N+ + QQ + L+K DP
Sbjct: 172 KTQNMMLYIMPIFIGFAAIGMPAGVALYWVVQNVFTFVQQFIMLRKPAEKIDP 224
>gi|334142729|ref|YP_004535937.1| preprotein translocase subunit YidC [Novosphingobium sp. PP1Y]
gi|333940761|emb|CCA94119.1| preprotein translocase subunit YidC [Novosphingobium sp. PP1Y]
Length = 586
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 115/213 (53%), Gaps = 17/213 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLT+IV+ FP+ ++Q S AMR++ P++KA+QERY D+++ Q E +LYK
Sbjct: 368 FGVAIILLTLIVRGIMFPIAQRQFASMAAMRAIQPKMKALQERYKDDKQKQQQEVMKLYK 427
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G+NPLAGCLP IPV+ LY+ L +A E WI L+ P +
Sbjct: 428 EEGVNPLAGCLPMFLQIPVFFALYKTLI-LAIEMRHQPFVLWIKDLSAPDPLHILN---- 482
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
LF + PP A VL +LL ++ ++ K+ + DP + Q + +
Sbjct: 483 ---LFGLLPFDPP----GFLAIGVLALLLGITMFLQFKL--NPAQMDP---TQQQIFMIM 530
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P + + SGL +YW T+NLL+ AQQ +L
Sbjct: 531 PWFMMFIMAPFASGLLVYWITSNLLTIAQQKFL 563
>gi|312128801|ref|YP_003993675.1| membrane protein insertase, yidc/oxa1 family [Caldicellulosiruptor
hydrothermalis 108]
gi|311778820|gb|ADQ08306.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor
hydrothermalis 108]
Length = 341
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 122/260 (46%), Gaps = 28/260 (10%)
Query: 90 NSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMA 149
N WL + + +LK++ D + H+P +YG A+ILLT+IV+ PL KQ++S+
Sbjct: 2 NPTWLDFLAIPLGRLLKLIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIQSTSK 61
Query: 150 MRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSN 209
M +AP+++ IQ++Y DQ+++Q E +LY+ G NP GC P L +P+ LY N
Sbjct: 62 MAEVAPRLQEIQQKYKNDQKKMQEEMLKLYQETGYNPAGGCWPLLIQLPILFSLYYVFQN 121
Query: 210 VADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTF--------A 261
L + + G T Q VD LG F
Sbjct: 122 PLVYVLGKSHQYVKDLITGATGYNITQR---------IVDEAQKLGLDMHFFGINLAQKE 172
Query: 262 YLVLPVLLVVSQYISVKIIQSSQNN-DPNMKSSQ----------ALTNFLPLMIGYFALS 310
+VLP+L ++S+ +SQ +P SQ +L F PLM + AL
Sbjct: 173 LIVLPILSAAFSFLSILYSMNSQKKFNPQYSQSQSNAMAESMNKSLMIFSPLMSYFIALQ 232
Query: 311 VPSGLSLYWFTNNLLSTAQQ 330
VPSGL LYW NL + QQ
Sbjct: 233 VPSGLVLYWTVTNLFTILQQ 252
>gi|378973468|ref|YP_005222074.1| Oxa1 family cytochrome oxidase biogenesis protein [Treponema
pallidum subsp. pertenue str. SamoaD]
gi|378974534|ref|YP_005223142.1| Oxa1 family cytochrome oxidase biogenesis protein [Treponema
pallidum subsp. pertenue str. Gauthier]
gi|378982443|ref|YP_005230750.1| Oxa1 family cytochrome oxidase biogenesis protein [Treponema
pallidum subsp. pertenue str. CDC2]
gi|374677793|gb|AEZ58086.1| Oxa1 family cytochrome oxidase biogenesis protein [Treponema
pallidum subsp. pertenue str. SamoaD]
gi|374678862|gb|AEZ59154.1| Oxa1 family cytochrome oxidase biogenesis protein [Treponema
pallidum subsp. pertenue str. CDC2]
gi|374679931|gb|AEZ60222.1| Oxa1 family cytochrome oxidase biogenesis protein [Treponema
pallidum subsp. pertenue str. Gauthier]
Length = 622
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 125/240 (52%), Gaps = 18/240 (7%)
Query: 96 GITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAP 155
GI +E +LK L TL +P +G AIIL+T+ +K FPLTK+ + M+ L P
Sbjct: 394 GILYPLEVLLKWLLRLFYTL-IP-NWGVAIILVTIAIKVLFFPLTKRSFIAMQKMQELQP 451
Query: 156 QVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGL 215
++ IQERY G+ ++I E A+LY+ A NPL+GCLPTL +P+ +YR +N +
Sbjct: 452 HMQRIQERYKGNTQKIHEEMAKLYREAQYNPLSGCLPTLVQMPIIFAMYRLFNNYFEFRG 511
Query: 216 LTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYI 275
+WIP L+ ++ W PF P W+ +LPVL VVSQ +
Sbjct: 512 AMFIPYWIPDLSLADSV----------WTLPF--ALPVTQWTQM---RMLPVLYVVSQIM 556
Query: 276 SVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
K+ Q + + S +T +PL +F PSGL +YW N ++ QQ+ +++
Sbjct: 557 FSKLTQVP-HTEQQKTSMTIMTYVMPLFFFFFFYDAPSGLLVYWTAMNGVTLVQQLVMKR 615
>gi|87198602|ref|YP_495859.1| inner membrane protein translocase component YidC [Novosphingobium
aromaticivorans DSM 12444]
gi|87134283|gb|ABD25025.1| protein translocase subunit yidC [Novosphingobium aromaticivorans
DSM 12444]
Length = 600
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 135/257 (52%), Gaps = 29/257 (11%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLT+IV+ FP+ ++Q S AMR+L P++KAIQERY D+++ Q E LYK
Sbjct: 368 FGVAIILLTLIVRGVMFPIAQRQFASMAAMRALQPKMKAIQERYKDDKQKQQQEIMELYK 427
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF-FWIPSLAGPTTIAARQNGS 239
+NPLAGCLP IPV+ LY+ L V + + F WI L+ P +
Sbjct: 428 REKVNPLAGCLPIFLQIPVFFALYKVL--VLTIEMRHQPFALWIKDLSAPDPLHVLN--- 482
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
LF + PP VL +LL ++ ++ K+ ++ DP + Q + F
Sbjct: 483 ----LFGLLPFDPP----SFLGIGVLAILLGITMWLQFKLQPAAM--DP---AQQQVFAF 529
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDERLDINK 359
+P ++ + +GL +YW T+NLL+ AQ QK+ ++ P Q +++DI++
Sbjct: 530 MPWIMMFVMAPFAAGLLIYWITSNLLTIAQ----QKYLYSRHP--QLKAQADKDQVDIDR 583
Query: 360 SV----PGLSSTKKEAR 372
+V S+ K +AR
Sbjct: 584 AVTREKKATSTRKPKAR 600
>gi|402574988|ref|YP_006624331.1| preprotein translocase subunit YidC [Desulfosporosinus meridiei DSM
13257]
gi|402256185|gb|AFQ46460.1| preprotein translocase subunit YidC [Desulfosporosinus meridiei DSM
13257]
Length = 224
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 126/240 (52%), Gaps = 28/240 (11%)
Query: 94 LSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSL 153
+S I M +LK+L + + +PY YG AIILLT+++K FPLT KQ+ S L
Sbjct: 1 MSTIVEAMTYLLKILYSFSTAVGLPY-YGVAIILLTMLIKTLIFPLTYKQMASMRKTVDL 59
Query: 154 APQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADE 213
P++KAIQE+Y ++E+ LYK +NPL GCLP + +P++ LY AL + +
Sbjct: 60 QPKIKAIQEKYKNNKEKANAAVMELYKEHNVNPLGGCLPIVVQLPIFWALYSALLHFPYD 119
Query: 214 GLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQ 273
P +A LF D G++ ++ +L+LP+ +
Sbjct: 120 ---------------PANASAH--------LFLGFDLTKIYGFAFSY-HLILPIFAAATT 155
Query: 274 YISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
++ K+ + + DP K+ + +P+ Y +++VP+GL+LYW T N++S QQ+++
Sbjct: 156 FLQTKLTSPNASTDPTQKT---MLYIMPVFFAYISVTVPAGLALYWVTMNVVSIFQQLFI 212
>gi|338706895|ref|YP_004673663.1| Oxa1 family cytochrome oxidase biogenesis protein [Treponema
paraluiscuniculi Cuniculi A]
gi|335344956|gb|AEH40872.1| Oxa1 family cytochrome oxidase biogenesis protein [Treponema
paraluiscuniculi Cuniculi A]
Length = 622
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 125/240 (52%), Gaps = 18/240 (7%)
Query: 96 GITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAP 155
GI +E +LK L TL +P +G AIIL+T+ +K FPLTK+ + M+ L P
Sbjct: 394 GILYPLEVLLKWLLRLFYTL-IP-NWGVAIILVTIAIKVLFFPLTKRSFIAMQKMQELQP 451
Query: 156 QVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGL 215
++ IQERY G+ ++I E A+LY+ A NPL+GCLPTL +P+ +YR +N +
Sbjct: 452 HMQRIQERYKGNTQKIHEEMAKLYREAQYNPLSGCLPTLVQMPIIFAMYRLFNNYFEFRG 511
Query: 216 LTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYI 275
+WIP L+ ++ W PF P W+ +LPVL VVSQ +
Sbjct: 512 AMFIPYWIPDLSLADSV----------WTLPF--ALPVTQWTQM---RMLPVLYVVSQIM 556
Query: 276 SVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
K+ Q + + S +T +PL +F PSGL +YW N ++ QQ+ +++
Sbjct: 557 FSKLTQVP-HTEQQKTSMTIMTYVMPLFFFFFFYDAPSGLLVYWTAMNGVTLVQQLVMKR 615
>gi|378975591|ref|YP_005224201.1| Oxa1 family cytochrome oxidase biogenesis protein [Treponema
pallidum subsp. pallidum DAL-1]
gi|384422438|ref|YP_005631797.1| inner membrane protein OxaA [Treponema pallidum subsp. pallidum
str. Chicago]
gi|38502857|sp|O66103.2|YIDC_TREPA RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|291060304|gb|ADD73039.1| inner membrane protein OxaA [Treponema pallidum subsp. pallidum
str. Chicago]
gi|374680991|gb|AEZ61281.1| Oxa1 family cytochrome oxidase biogenesis protein [Treponema
pallidum subsp. pallidum DAL-1]
Length = 622
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 125/240 (52%), Gaps = 18/240 (7%)
Query: 96 GITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAP 155
GI +E +LK L TL +P +G AIIL+T+ +K FPLTK+ + M+ L P
Sbjct: 394 GILYPLEVLLKWLLRLFYTL-IP-NWGVAIILVTIAIKVLFFPLTKRSFIAMQKMQELQP 451
Query: 156 QVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGL 215
++ IQERY G+ ++I E A+LY+ A NPL+GCLPTL +P+ +YR +N +
Sbjct: 452 HMQRIQERYKGNTQKIHEEMAKLYREAQYNPLSGCLPTLVQMPIIFAMYRLFNNYFEFRG 511
Query: 216 LTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYI 275
+WIP L+ ++ W PF P W+ +LPVL VVSQ +
Sbjct: 512 AMFIPYWIPDLSLADSV----------WTLPF--ALPVTQWTQM---RMLPVLYVVSQIM 556
Query: 276 SVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
K+ Q + + S +T +PL +F PSGL +YW N ++ QQ+ +++
Sbjct: 557 FSKLTQVP-HTEQQKTSMTIMTYVMPLFFFFFFYDAPSGLLVYWTAMNGVTLVQQLVMKR 615
>gi|410995426|gb|AFV96891.1| membrane protein insertase [uncultured Sulfuricurvum sp. RIFRC-1]
Length = 535
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 105/215 (48%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LTV+++ +PLT K + S ++ +AP++K +QE+Y GD R+ +YK
Sbjct: 334 WGWAIIGLTVLIRIFLYPLTHKGMVSMQKIKDIAPRIKEVQEKYKGDPARMNAAVMEMYK 393
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N + Q
Sbjct: 394 KHGANPLGGCLPLILQIPVFFAIYRVLLNAVE----------------------LQGAPW 431
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I W+ P Y +LP+L+ + Y K I S DP + + FL
Sbjct: 432 ILWVTDLSRMDP---------YYILPILMGATMYYQQK-ITPSNFTDP---LQEKIFKFL 478
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ +F ++ P+GL LYWF NNL S AQQ + K
Sbjct: 479 PLIFMFFFITFPAGLVLYWFVNNLFSIAQQYLVNK 513
>gi|374583857|ref|ZP_09656951.1| preprotein translocase subunit YidC [Desulfosporosinus youngiae DSM
17734]
gi|374419939|gb|EHQ92374.1| preprotein translocase subunit YidC [Desulfosporosinus youngiae DSM
17734]
Length = 224
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 125/240 (52%), Gaps = 28/240 (11%)
Query: 94 LSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSL 153
+S I M+ +L +L + S++ +PY YG AIILLT+++K FPLT KQ+ S L
Sbjct: 1 MSTIVEGMKNLLDILYNLSSSVGLPY-YGVAIILLTMLIKTLIFPLTYKQMASMRKTVDL 59
Query: 154 APQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADE 213
P++KA+QE+Y ++E+ LYK +NPL GCLP L +P++ LY AL N +
Sbjct: 60 QPKIKALQEKYKNNKEKANAAVMELYKEHNVNPLGGCLPILVQLPIFWALYSALLNFPYD 119
Query: 214 GLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQ 273
PT A LF D G++ ++ +L+LP+ +
Sbjct: 120 ---------------PTNPTAH--------LFLGFDLTRKYGFALSY-HLILPIFAAATT 155
Query: 274 YISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
Y+ ++ + DP K+ + +P Y + +VP+GL+LYW T N++S QQ+++
Sbjct: 156 YLQTRLTSPNATTDPTQKT---MLYIMPAFFAYISATVPAGLALYWVTMNVVSIFQQLFI 212
>gi|15639934|ref|NP_219385.1| inner membrane protein translocase component YidC [Treponema
pallidum subsp. pallidum str. Nichols]
gi|189026172|ref|YP_001933944.1| inner membrane protein translocase component YidC [Treponema
pallidum subsp. pallidum SS14]
gi|408502795|ref|YP_006870239.1| Oxa1 family cytochrome oxidase biogenesis protein [Treponema
pallidum subsp. pallidum str. Mexico A]
gi|3323271|gb|AAC65906.1| membrane protein [Treponema pallidum subsp. pallidum str. Nichols]
gi|189018747|gb|ACD71365.1| membrane protein [Treponema pallidum subsp. pallidum SS14]
gi|408476158|gb|AFU66923.1| Oxa1 family cytochrome oxidase biogenesis protein [Treponema
pallidum subsp. pallidum str. Mexico A]
Length = 665
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 125/240 (52%), Gaps = 18/240 (7%)
Query: 96 GITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAP 155
GI +E +LK L TL +P +G AIIL+T+ +K FPLTK+ + M+ L P
Sbjct: 437 GILYPLEVLLKWLLRLFYTL-IP-NWGVAIILVTIAIKVLFFPLTKRSFIAMQKMQELQP 494
Query: 156 QVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGL 215
++ IQERY G+ ++I E A+LY+ A NPL+GCLPTL +P+ +YR +N +
Sbjct: 495 HMQRIQERYKGNTQKIHEEMAKLYREAQYNPLSGCLPTLVQMPIIFAMYRLFNNYFEFRG 554
Query: 216 LTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYI 275
+WIP L+ ++ W PF P W+ +LPVL VVSQ +
Sbjct: 555 AMFIPYWIPDLSLADSV----------WTLPF--ALPVTQWTQM---RMLPVLYVVSQIM 599
Query: 276 SVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
K+ Q + + S +T +PL +F PSGL +YW N ++ QQ+ +++
Sbjct: 600 FSKLTQVP-HTEQQKTSMTIMTYVMPLFFFFFFYDAPSGLLVYWTAMNGVTLVQQLVMKR 658
>gi|385229115|ref|YP_005789048.1| membrane protein insertase [Helicobacter pylori Puno120]
gi|344335553|gb|AEN15997.1| membrane protein insertase [Helicobacter pylori Puno120]
Length = 546
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 115/215 (53%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS DP M++ L FL
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSV-TDP-MQAK--LFKFL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|397677337|ref|YP_006518875.1| membrane protein OxaA [Zymomonas mobilis subsp. mobilis ATCC 29191]
gi|395398026|gb|AFN57353.1| Membrane protein oxaA [Zymomonas mobilis subsp. mobilis ATCC 29191]
Length = 579
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 124/245 (50%), Gaps = 23/245 (9%)
Query: 92 DWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMR 151
DW G ++E V D + LHV YG AIIL+ ++A FP+ KQ S +MR
Sbjct: 335 DW--GWFAIIEKVFFYYLDWL-FLHVG-NYGLAIILMVFTIRALIFPIANKQYASMASMR 390
Query: 152 SLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVA 211
L P+++A++ERY D R++ E LY+ +NP AGCLP P++I LY+ L V
Sbjct: 391 RLQPKMQAVRERYKNDDARMRQELVTLYQKEKVNPFAGCLPMFIQFPIFIALYKTLL-VT 449
Query: 212 DEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYL-VLPVLLV 270
E WI L+ P + LF + PP F + VLP++L
Sbjct: 450 IESRHQPFILWIKDLSAPDPLTPFN-------LFGLLHFTPP-----HFLMIGVLPIILG 497
Query: 271 VSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
++ ++ + S Q +P + Q + +FLPL+ F + +GL +Y+ NNL+S AQ
Sbjct: 498 ITMWLQFR--ASPQQLEP---AQQQIMSFLPLISVIFMAPLAAGLQVYYIFNNLISLAQM 552
Query: 331 VWLQK 335
+WLQ
Sbjct: 553 MWLQH 557
>gi|384110039|ref|ZP_10010882.1| membrane protein insertase, YidC/Oxa1 family [Treponema sp. JC4]
gi|383868405|gb|EID84061.1| membrane protein insertase, YidC/Oxa1 family [Treponema sp. JC4]
Length = 588
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 131/262 (50%), Gaps = 30/262 (11%)
Query: 84 VTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQ 143
++ Q+S WL+ + +++ V+++L V +G II+LT+I+K FPL+K Q
Sbjct: 335 ISDCVQSSGWLNWLEAILKFVMELL------YKVIPNWGVTIIVLTIILKILLFPLSKNQ 388
Query: 144 VESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGL 203
++ M+++ P+++AIQE+Y DQ R+Q+E +LYK AG NP++GCLP L + +
Sbjct: 389 SMGTLKMQAIQPRMQAIQEKYKNDQTRMQMEVQKLYKEAGYNPVSGCLPMLFQFLILFAM 448
Query: 204 YRALSNVADEGLLTEGFF---WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTF 260
Y +N + F WIP L+ ++ P LG
Sbjct: 449 YNLFNNYFE---FRGAMFIPNWIPDLSVGDSVKTLNFNI------------PALGNQIR- 492
Query: 261 AYLVLPVLLVVSQYISVKIIQSSQNNDPNMK--SSQALTNFLPLMIGYFALSVPSGLSLY 318
+LPV+ V+SQ + KI QS Q N S + + +PL + + P+GL LY
Sbjct: 493 ---ILPVIYVISQLLFGKITQSFQPMGANQSQASMKMMMYGMPLFFFFIFYNAPAGLILY 549
Query: 319 WFTNNLLSTAQQVWLQKFGGAK 340
W +N+ S QQ+ + K K
Sbjct: 550 WTVSNIFSLFQQIIINKMMAEK 571
>gi|383648018|ref|ZP_09958424.1| membrane protein insertase [Sphingomonas elodea ATCC 31461]
Length = 572
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 111/213 (52%), Gaps = 17/213 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLT+ ++ FP+ +KQ S MR + P++KAIQERY D++R Q E +LYK
Sbjct: 357 FGVAIILLTITIRGLLFPIAQKQFASMAKMRQVQPKMKAIQERYKDDKQRQQQEIMQLYK 416
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPLAGC P L IP+ LY+ L + E WI L+ P + +
Sbjct: 417 TEKVNPLAGCAPMLLQIPIMFALYKVLL-LTIEMRHQPFMLWIKDLSAP-------DPAT 468
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I LF ++ PP A V+PVLL +S + +++ N P + + + +
Sbjct: 469 ILNLFGYLHFTPP----SFLAIGVVPVLLGISMFFQMRM-----NPAPMDEMQKQMFAIM 519
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + GL LYW T+N+L+ QQ WL
Sbjct: 520 PWMLMFLMAPFAVGLQLYWITSNVLTVLQQQWL 552
>gi|344997645|ref|YP_004799988.1| YidC/Oxa1 family membrane protein insertase [Caldicellulosiruptor
lactoaceticus 6A]
gi|343965864|gb|AEM75011.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor
lactoaceticus 6A]
Length = 341
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 120/260 (46%), Gaps = 28/260 (10%)
Query: 90 NSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMA 149
N WL + + +LK + D + H+P +YG A+ILLT+IV+ PL KQ++S+
Sbjct: 2 NPTWLDFLAIPLGRLLKFIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIQSTSK 61
Query: 150 MRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSN 209
M +AP+++ IQ++Y DQ ++Q E +LY+ G NP GC P L +P+ LY N
Sbjct: 62 MAEVAPRLQEIQQKYKNDQRKMQEEMLKLYQETGYNPAGGCWPLLIQLPILFSLYYVFQN 121
Query: 210 VADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTF--------A 261
L + + G T Q VD LG F
Sbjct: 122 PLVYVLGKSHQYVKDLITGATGYNITQR---------IVDEAQKLGLDMHFFGINLAQKE 172
Query: 262 YLVLPVLLVVSQYISVKIIQSSQNN-DPNMKSSQ----------ALTNFLPLMIGYFALS 310
+VLP+L ++S+ +SQ +P SQ +L F PLM + AL
Sbjct: 173 LIVLPILSAAFSFLSILYSMNSQKKFNPQYSQSQSNAMAESINRSLMIFSPLMSYFIALQ 232
Query: 311 VPSGLSLYWFTNNLLSTAQQ 330
VPSGL LYW NL + QQ
Sbjct: 233 VPSGLVLYWTVTNLFTILQQ 252
>gi|385230727|ref|YP_005790643.1| membrane protein insertase [Helicobacter pylori Puno135]
gi|344337165|gb|AEN19126.1| membrane protein insertase [Helicobacter pylori Puno135]
Length = 545
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 112/215 (52%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 350 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPRMKELQEKYKGEPQKLQAHMMQLYK 409
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 410 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 455
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS DP L FL
Sbjct: 456 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSV-TDP---MQAKLFKFL 494
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 495 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 529
>gi|455791724|gb|EMF43521.1| 60Kd inner membrane protein [Leptospira interrogans serovar Lora
str. TE 1992]
gi|456824286|gb|EMF72723.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 770
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 113/213 (53%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ +S M+ L+PQ+K I E++A D + Q +T LYK
Sbjct: 318 YGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELYK 377
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 378 KNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI-------- 427
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + P +L +L+V +Q ++ +S + DPN K L +
Sbjct: 428 --WTSPAI----PYFTQTGIGLNLLALLMVGTQVFQTRM--TSVSMDPNQK---MLMYVM 476
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 477 PVMMLYIFWNMPSGVTLYWTFQNVLSIGQQ-WI 508
>gi|342218819|ref|ZP_08711422.1| stage III sporulation protein J family protein [Megasphaera sp.
UPII 135-E]
gi|341588766|gb|EGS32141.1| stage III sporulation protein J family protein [Megasphaera sp.
UPII 135-E]
Length = 223
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 122/241 (50%), Gaps = 36/241 (14%)
Query: 94 LSGITNVMETVLKVLKDGMSTLHVPY-AYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
+S +T +M T L T H Y +YG AII+LTVI+K PLT KQ++S M+
Sbjct: 6 ISPLTYIMTTFLTYCYT--VTQHAGYPSYGIAIIMLTVIIKLILSPLTAKQIKSMQGMQV 63
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
+ P++K +Q++Y G+Q+++Q E +LYK G+NPL+GCLP + +P I ++ AL
Sbjct: 64 IQPKIKELQKKYKGNQKKLQEEMRKLYKETGVNPLSGCLPIIIQMPFLISIFYALRTYPY 123
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
+ E F W+ SL P H VLPVL VS
Sbjct: 124 DPAF-ESFLWLSSLGAPD------------------PTH------------VLPVLSAVS 152
Query: 273 QYISVKIIQSSQNNDPNMKSSQ--ALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
++ K + Q N+ + SQ + +PL IG+ + PSGL +YW +N+ AQQ
Sbjct: 153 TFLIQKQMTGVQANEGEGQGSQQKIMQIVMPLFIGWISWRFPSGLVIYWVLSNVFQWAQQ 212
Query: 331 V 331
+
Sbjct: 213 M 213
>gi|384893416|ref|YP_005767509.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori Cuz20]
gi|308062713|gb|ADO04601.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori Cuz20]
Length = 547
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 111/215 (51%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 352 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 411
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 412 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 457
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS DP L FL
Sbjct: 458 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSV-TDP---MQAKLFKFL 496
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ + K
Sbjct: 497 PLLFTIFLITFPAGLVLYWTTNNILSVLQQFIINK 531
>gi|154174780|ref|YP_001408435.1| putative inner membrane protein translocase component YidC
[Campylobacter curvus 525.92]
gi|112802923|gb|EAU00267.1| inner membrane protein OxaA [Campylobacter curvus 525.92]
Length = 518
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 124/258 (48%), Gaps = 41/258 (15%)
Query: 78 VSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATF 137
+SS D T W + I M L L + +G+AI++LT++++ F
Sbjct: 290 LSSMDPRLTDIIEYGWFTFIAKPMFAFLDFLHKYIGN------WGWAIVVLTLVIRIILF 343
Query: 138 PLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATI 197
PLT K + S ++ LAP+VK IQ +Y GD +++ LYK G NP+ GCLP L I
Sbjct: 344 PLTYKGMLSMNKLKELAPKVKEIQAKYKGDPQKLNTHMMELYKKNGANPMGGCLPILLQI 403
Query: 198 PVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWS 257
PV+ +YR L N + +G WI W+ P
Sbjct: 404 PVFFAIYRVLLNAIE----LKGAPWI------------------LWIHDLSAMDP----- 436
Query: 258 DTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSL 317
+ +LP+L+ + ++ ++ ++ DP + + +LPL+ +F ++ P+GL+L
Sbjct: 437 ----FFILPILMGATMFLQQRLTPTT-FTDP---MQEKIMKYLPLIFTFFFVTFPAGLTL 488
Query: 318 YWFTNNLLSTAQQVWLQK 335
YWF NN+ S QQ+++ K
Sbjct: 489 YWFVNNVCSVIQQIFVNK 506
>gi|402548074|ref|ZP_10844938.1| membrane protein insertase, YidC/Oxa1 family [Campylobacter sp.
FOBRC14]
gi|401015561|gb|EJP74339.1| membrane protein insertase, YidC/Oxa1 family [Campylobacter sp.
FOBRC14]
Length = 518
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 124/258 (48%), Gaps = 41/258 (15%)
Query: 78 VSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATF 137
+SS D T W + I M L L + +G+AI++LT++++ F
Sbjct: 290 LSSMDPRLTDIIEYGWFTFIAKPMFAFLDFLHKYIGN------WGWAIVVLTLVIRIILF 343
Query: 138 PLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATI 197
PLT K + S ++ LAP+VK IQ +Y GD +++ LYK G NP+ GCLP L I
Sbjct: 344 PLTYKGMLSMNKLKELAPKVKEIQAKYKGDPQKLNTHMMELYKKNGANPMGGCLPILLQI 403
Query: 198 PVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWS 257
PV+ +YR L N + +G WI W+ P
Sbjct: 404 PVFFAIYRVLLNAIE----LKGAPWI------------------LWIHDLSAMDP----- 436
Query: 258 DTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSL 317
+ +LP+L+ + ++ ++ ++ DP + + +LPL+ +F ++ P+GL+L
Sbjct: 437 ----FFILPILMGATMFLQQRLTPTT-FTDP---MQEKIMKYLPLIFTFFFVTFPAGLTL 488
Query: 318 YWFTNNLLSTAQQVWLQK 335
YWF NN+ S QQ+++ K
Sbjct: 489 YWFVNNVCSVIQQIFVNK 506
>gi|315637646|ref|ZP_07892852.1| inner membrane protein [Arcobacter butzleri JV22]
gi|315478100|gb|EFU68827.1| inner membrane protein [Arcobacter butzleri JV22]
Length = 533
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 118/243 (48%), Gaps = 41/243 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M +L+ L+ + +G+ I+ LT++VK +PL+ K + S ++
Sbjct: 322 WFTFIAKPMFVLLQFLQGYIGN------WGWTIVALTILVKLVLYPLSYKGMVSMQKLKD 375
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K IQ +Y D+++ + LYK G NP+ GCLP L IP++ +YR L N A
Sbjct: 376 LAPKMKEIQLKYKDDKQKQSMHMMELYKKHGANPMGGCLPLLLQIPIFFAIYRVLIN-AI 434
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E E FWI LA + PF VLP+L+ +
Sbjct: 435 ELKGAEWIFWIHDLAA---------------MDPF---------------FVLPILMGAT 464
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
YI KI ++ ++ K Q LP++ +F L P+GL+LYWF NNL + QQ
Sbjct: 465 MYIQQKITPTTVQDELQKKIFQ----LLPIVFTFFFLWFPAGLTLYWFVNNLFTIGQQYV 520
Query: 333 LQK 335
+ K
Sbjct: 521 INK 523
>gi|146297758|ref|YP_001181529.1| 60 kDa inner membrane insertion protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145411334|gb|ABP68338.1| 60 kDa inner membrane insertion protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 349
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 34/263 (12%)
Query: 90 NSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMA 149
N WL + + +LK++ D + ++P +YG AIILLT+IV+ PL KQ+ S+
Sbjct: 2 NPTWLDFLAIPLGRLLKLIYDFLHGANIPGSYGIAIILLTLIVRGLLLPLYIKQIASTSK 61
Query: 150 MRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSN 209
M +AP+++ IQ++Y GDQ ++Q E +LY+ G NP +GC P L IP+ LY N
Sbjct: 62 MAEVAPRIQEIQQKYKGDQRKMQEEMLKLYQETGYNPASGCWPLLVQIPILFALYYVFQN 121
Query: 210 VADEGLLTEGFFWIPSLAGPTTIAAR---QNGSGISWLFPFVDGHPPLGWSDTF------ 260
+ + G T R Q +G + ++ LG F
Sbjct: 122 P------------LVYVLGKTHQYVRDLVQGKAGYAITQTIINEAQKLGLDMHFFGINLA 169
Query: 261 --AYLVLPVLLVVSQYISVKIIQSSQNN-DPNMKSSQA----------LTNFLPLMIGYF 307
+VLP+L + ++S+ +SQ +P SQ+ + F PLM +
Sbjct: 170 QKELIVLPILSAATMFLSIWFSTNSQKRFNPQYAQSQSNAMAEGMNRTMMIFSPLMSYFI 229
Query: 308 ALSVPSGLSLYWFTNNLLSTAQQ 330
AL VP+GL +YW NL S QQ
Sbjct: 230 ALQVPAGLVVYWTVTNLFSILQQ 252
>gi|386754924|ref|YP_006228142.1| membrane protein insertase [Helicobacter pylori Shi112]
gi|384561182|gb|AFI01649.1| membrane protein insertase [Helicobacter pylori Shi112]
Length = 547
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 115/215 (53%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 352 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 411
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 412 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 457
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS DP M++ + FL
Sbjct: 458 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSV-TDP-MQAK--IFKFL 496
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 497 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 531
>gi|420397883|ref|ZP_14897096.1| inner membrane protein oxaA [Helicobacter pylori CPY1962]
gi|393014557|gb|EJB15728.1| inner membrane protein oxaA [Helicobacter pylori CPY1962]
Length = 546
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 112/215 (52%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS DP + FL
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSV-TDP---MQAKIFKFL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|420407578|ref|ZP_14906742.1| inner membrane protein oxaA [Helicobacter pylori CPY6311]
gi|393021036|gb|EJB22170.1| inner membrane protein oxaA [Helicobacter pylori CPY6311]
Length = 546
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 112/215 (52%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS DP + FL
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSV-TDP---MQAKIFKFL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|385226070|ref|YP_005785995.1| inner membrane protein OxaA [Helicobacter pylori 83]
gi|332674216|gb|AEE71033.1| inner membrane protein OxaA [Helicobacter pylori 83]
Length = 546
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 112/215 (52%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS DP + FL
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSV-TDP---MQAKIFKFL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|420396029|ref|ZP_14895251.1| inner membrane protein oxaA [Helicobacter pylori CPY1124]
gi|393011008|gb|EJB12197.1| inner membrane protein oxaA [Helicobacter pylori CPY1124]
Length = 546
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 112/215 (52%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS DP + FL
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSV-TDP---MQAKIFKFL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|456968186|gb|EMG09421.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 664
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 113/213 (53%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ +S M+ L+PQ+K I E++A D + Q +T LYK
Sbjct: 212 YGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELYK 271
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 272 KNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI-------- 321
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + P +L +L+V +Q ++ +S + DPN K L +
Sbjct: 322 --WTSPAI----PYFTQTGIGLNLLALLMVGTQVFQTRM--TSVSMDPNQK---MLMYVM 370
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 371 PVMMLYIFWNMPSGVTLYWTFQNVLSIGQQ-WI 402
>gi|386753355|ref|YP_006226574.1| membrane protein insertase [Helicobacter pylori Shi169]
gi|384559613|gb|AFI00081.1| membrane protein insertase [Helicobacter pylori Shi169]
Length = 544
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 110/215 (51%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 349 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 408
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N + ++
Sbjct: 409 KHGANPLGGCLPLILQIPVFFAIYRVLYNAVE----------------------LKSSEW 446
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I W++ P Y +LP+L+ S Y + SS DP + FL
Sbjct: 447 ILWIYDLSIMDP---------YFILPLLMGASMYWHQSVTPSSV-TDP---MQAKIFKFL 493
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 494 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 528
>gi|384895221|ref|YP_005769210.1| inner membrane protein OxaA [Helicobacter pylori 35A]
gi|315585837|gb|ADU40218.1| inner membrane protein OxaA [Helicobacter pylori 35A]
Length = 546
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 112/215 (52%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS DP + FL
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSV-TDP---MQAKIFKFL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|418738410|ref|ZP_13294805.1| 60Kd inner membrane protein [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410745903|gb|EKQ98811.1| 60Kd inner membrane protein [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 622
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 113/213 (53%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ ES M+ L+PQ+K I E++A D + Q +T LYK
Sbjct: 418 YGWSIIIFAILFKLVFYPLNQKQAESMKKMQELSPQLKTINEKFANDPKMRQQKTMELYK 477
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 478 KNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI-------- 527
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + P +L +L+V +Q ++ +S + DPN K L +
Sbjct: 528 --WTSPAI----PYFTQTGIGLNLLALLMVGTQIFQTRM--TSVSMDPNQK---MLMYVM 576
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 577 PVMMLYIFWNMPSGVTLYWTFQNVLSIGQQ-WI 608
>gi|420401110|ref|ZP_14900309.1| inner membrane protein oxaA [Helicobacter pylori CPY3281]
gi|393016718|gb|EJB17877.1| inner membrane protein oxaA [Helicobacter pylori CPY3281]
Length = 546
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 112/215 (52%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS DP + FL
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSV-TDP---MQAKIFKFL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|420402550|ref|ZP_14901738.1| inner membrane protein oxaA [Helicobacter pylori CPY6081]
gi|393016017|gb|EJB17177.1| inner membrane protein oxaA [Helicobacter pylori CPY6081]
Length = 546
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 112/215 (52%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS DP + FL
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSV-TDP---MQAKIFKFL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|385249860|ref|YP_005778079.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori F57]
gi|317182655|dbj|BAJ60439.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori F57]
Length = 546
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 112/215 (52%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS DP + FL
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSV-TDP---MQAKIFKFL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|384899682|ref|YP_005775062.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori F30]
gi|317179626|dbj|BAJ57414.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori F30]
Length = 546
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 112/215 (52%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS DP + FL
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSV-TDP---MQAKIFKFL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|421095104|ref|ZP_15555817.1| 60Kd inner membrane protein [Leptospira borgpetersenii str.
200801926]
gi|410361814|gb|EKP12854.1| 60Kd inner membrane protein [Leptospira borgpetersenii str.
200801926]
gi|456888373|gb|EMF99356.1| 60Kd inner membrane protein [Leptospira borgpetersenii str.
200701203]
Length = 622
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 113/213 (53%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ ES M+ L+PQ+K I E++A D + Q +T LYK
Sbjct: 418 YGWSIIIFAILFKLVFYPLNQKQAESMKKMQELSPQLKTINEKFANDPKMRQQKTMELYK 477
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 478 KNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI-------- 527
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + P +L +L+V +Q ++ +S + DPN K L +
Sbjct: 528 --WTSPAI----PYFTQTGIGLNLLALLMVGTQIFQTRM--TSVSMDPNQK---MLMYVM 576
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 577 PVMMLYIFWNMPSGVTLYWTFQNVLSIGQQ-WI 608
>gi|452992120|emb|CCQ96436.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ
family) [Clostridium ultunense Esp]
Length = 230
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 122/229 (53%), Gaps = 40/229 (17%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YG AI+++T++V+ A PLT KQ +SS+ M+ + P++ I+E+Y + +++Q E +LY
Sbjct: 37 SYGLAIVIMTLMVRFAILPLTVKQYKSSLEMQKIQPEMMKIREKYKDNAQKMQEEMMKLY 96
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+ G+NP+AGCLP L P+ I Y A+S E + F W+
Sbjct: 97 QKHGVNPMAGCLPLLIQAPILIAFYNAISR--SEHIRESSFLWL---------------- 138
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQS---SQNNDPNMKSSQAL 296
LG SD F +LP+L + YI ++++ S +Q ++P +K +
Sbjct: 139 -------------QLGSSDPF--FILPILAALFTYIQMRVMNSINPAQMSNPQIK---MM 180
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQ 345
N +P I + A+S+PS LSLYW NL S Q +L K ++P+K+
Sbjct: 181 NNIMPFFILFMAISLPSALSLYWVVGNLFSIG-QTYLLKDLMKREPVKE 228
>gi|420405770|ref|ZP_14904943.1| inner membrane protein oxaA [Helicobacter pylori CPY6271]
gi|393021589|gb|EJB22719.1| inner membrane protein oxaA [Helicobacter pylori CPY6271]
Length = 546
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 112/215 (52%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS DP + FL
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSV-TDP---MQAKIFKFL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|387782966|ref|YP_005793679.1| inner membrane protein [Helicobacter pylori 51]
gi|261838725|gb|ACX98491.1| inner membrane protein [Helicobacter pylori 51]
Length = 546
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 112/215 (52%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS DP + FL
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSV-TDP---MQAKIFKFL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|384890131|ref|YP_005764433.1| inner membrane protein translocase component YidC [Helicobacter
pylori v225d]
gi|297380697|gb|ADI35584.1| inner membrane protein translocase component YidC [Helicobacter
pylori v225d]
Length = 546
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 112/215 (52%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS DP + FL
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSV-TDP---MQAKIFKFL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|418720317|ref|ZP_13279515.1| 60Kd inner membrane protein [Leptospira borgpetersenii str. UI
09149]
gi|410743295|gb|EKQ92038.1| 60Kd inner membrane protein [Leptospira borgpetersenii str. UI
09149]
Length = 622
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 113/213 (53%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ ES M+ L+PQ+K I E++A D + Q +T LYK
Sbjct: 418 YGWSIIIFAILFKLVFYPLNQKQAESMKKMQELSPQLKTINEKFANDPKMRQQKTMELYK 477
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 478 KNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI-------- 527
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + P +L +L+V +Q ++ +S + DPN K L +
Sbjct: 528 --WTSPAI----PYFTQTGIGLNLLALLMVGTQIFQTRM--TSVSMDPNQK---MLMYVM 576
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 577 PVMMLYIFWNMPSGVTLYWTFQNVLSIGQQ-WI 608
>gi|386751799|ref|YP_006225019.1| membrane protein insertase [Helicobacter pylori Shi417]
gi|384558057|gb|AFH98525.1| membrane protein insertase [Helicobacter pylori Shi417]
Length = 544
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 112/215 (52%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 349 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 408
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 409 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 454
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS DP + FL
Sbjct: 455 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSV-TDP---MQAKIFKFL 493
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 494 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 528
>gi|425789988|ref|YP_007017908.1| membrane protein insertase [Helicobacter pylori Aklavik117]
gi|425628303|gb|AFX91771.1| membrane protein insertase [Helicobacter pylori Aklavik117]
Length = 544
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 112/215 (52%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 349 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 408
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 409 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 454
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS + K + FL
Sbjct: 455 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSVTDPLQAK----IFKFL 493
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 494 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 528
>gi|387908639|ref|YP_006338973.1| inner membrane protein translocase component YidC [Helicobacter
pylori XZ274]
gi|387573574|gb|AFJ82282.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori XZ274]
Length = 546
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 110/215 (51%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K IQE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKEIQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + FL
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKFL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|385218105|ref|YP_005779581.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori F16]
gi|317178154|dbj|BAJ55943.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori F16]
Length = 546
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 112/215 (52%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS DP + FL
Sbjct: 457 ------IMD-----------PYFILPLLMGTSMYWHQSVTPSSV-TDP---MQAKIFKFL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|148658060|ref|YP_001278265.1| 60 kDa inner membrane insertion protein [Roseiflexus sp. RS-1]
gi|148570170|gb|ABQ92315.1| 60 kDa inner membrane insertion protein [Roseiflexus sp. RS-1]
Length = 330
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 121/235 (51%), Gaps = 25/235 (10%)
Query: 122 GFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKL 181
GFAIIL T++ + PLT K ++SS M+ L P +K +Q +Y D +++Q ET RLY+
Sbjct: 26 GFAIILFTIVARIVILPLTIKSLQSSRKMQELQPHMKELQRKYGKDPQKLQEETMRLYRE 85
Query: 182 AGINPLAGCLPTLATIPVWIGLYRALSNV--------ADEGLLT----EGFFWIPSLAGP 229
+NP+ GCLP L +P+++G+Y+A+ N+ A +L +G I
Sbjct: 86 YKVNPVGGCLPMLLQLPIFLGVYQAVINLTRVSPAEHAGSAMLRVLNEQG---IAVGVAS 142
Query: 230 TTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPN 289
T+ Q WL P LG +D Y +LP+L V+ Q I V+++ + + DP
Sbjct: 143 ATLGQPQLAGSFLWL-------PDLGKTD--PYYILPILSVIFQLI-VQLMATPRVQDPQ 192
Query: 290 MKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMK 344
K+ LP++ GY PSG LYW ++LS QQ + +G + +K
Sbjct: 193 QKAMMQSMLILPIVFGYIGFIFPSGAVLYWVVGSILSIIQQYVISGWGSLANYLK 247
>gi|134301155|ref|YP_001114651.1| 60 kDa inner membrane insertion protein [Desulfotomaculum reducens
MI-1]
gi|134053855|gb|ABO51826.1| protein translocase subunit yidC [Desulfotomaculum reducens MI-1]
Length = 229
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 131/278 (47%), Gaps = 55/278 (19%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W I + M ++ L + P +Y AIILLT+ +K +PL+KKQ+ S + M+
Sbjct: 4 WFDAIVDGMTALMNWLYGFTVSFGFP-SYALAIILLTIFIKVVLYPLSKKQMHSMVMMQK 62
Query: 153 LAPQVKAIQERYAG-DQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVA 211
LAP++KAIQ++Y D + +Q + LYK +NP+AGCLP L +P+ I LYRAL
Sbjct: 63 LAPEIKAIQDKYKNKDPQMMQQKIMELYKEHNVNPMAGCLPLLVQMPILIALYRALYAFP 122
Query: 212 DEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVV 271
+ FFW+ SL+ G PL +L
Sbjct: 123 FKNPDHAHFFWVESLSK--------------------TGDIPLA-----------LLAAA 151
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
+ Y+ K+ ++Q+ ++ + + +PL IG+ A +VP+GL+LYW N + QQ
Sbjct: 152 TTYLQSKLTTNTQD-----QTQKTMLYTMPLFIGWIAHTVPAGLALYWVVFNTVGAIQQ- 205
Query: 332 WLQKFGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKK 369
W II E L + + V G+ ++K
Sbjct: 206 W----------------IINKETLHLKEGVTGVEGSRK 227
>gi|420411184|ref|ZP_14910316.1| inner membrane protein oxaA [Helicobacter pylori NQ4228]
gi|393029973|gb|EJB31052.1| inner membrane protein oxaA [Helicobacter pylori NQ4228]
Length = 555
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 110/215 (51%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 360 WGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 419
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 420 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 465
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + FL
Sbjct: 466 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKFL 504
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 505 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 539
>gi|217033919|ref|ZP_03439343.1| hypothetical protein HP9810_870g51 [Helicobacter pylori 98-10]
gi|216943682|gb|EEC23127.1| hypothetical protein HP9810_870g51 [Helicobacter pylori 98-10]
Length = 546
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 112/215 (52%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS DP + FL
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSV-TDP---MQAKIFKFL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|425790385|ref|YP_007018302.1| membrane protein insertase [Helicobacter pylori Aklavik86]
gi|425628700|gb|AFX89240.1| membrane protein insertase [Helicobacter pylori Aklavik86]
Length = 547
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 112/215 (52%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 352 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 411
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 412 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 457
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS + K + FL
Sbjct: 458 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSVTDPMQAK----IFKFL 496
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 497 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 531
>gi|420402904|ref|ZP_14902090.1| inner membrane protein oxaA [Helicobacter pylori CPY6261]
gi|393020070|gb|EJB21209.1| inner membrane protein oxaA [Helicobacter pylori CPY6261]
Length = 545
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 115/215 (53%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 350 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 409
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 410 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 455
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS DP M++ + FL
Sbjct: 456 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSV-TDP-MQAK--IFKFL 494
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 495 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 529
>gi|430741773|ref|YP_007200902.1| membrane protein insertase [Singulisphaera acidiphila DSM 18658]
gi|430013493|gb|AGA25207.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
protein [Singulisphaera acidiphila DSM 18658]
Length = 752
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG AIILLT++V+ FPL +KQ ++ M+ L P +K IQE+Y D+ER ET LYK
Sbjct: 463 YGIAIILLTLLVRMIMFPLGRKQALAAKKMQDLQPLLKEIQEKYKDDKERQTKETFALYK 522
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G+NP+ GCLP L +P+++GL++AL+N L F +I +LA P +
Sbjct: 523 KHGVNPVGGCLPALIQLPIFVGLWQALNNSVH--LRHASFLYIQNLAAPDML-------- 572
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+ FPF G P LG + +LP L+V + K+ + P + Q + ++
Sbjct: 573 --FKFPFPGGLPLLGEY----FNLLPFLVVSLMLVQTKLF-APPATTPEAEMQQKMMKYM 625
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSD 348
+ + + VPSGL +Y+ T++L ++++ L K A Q D
Sbjct: 626 MIFMAFMFYKVPSGLGIYFITSSLWQISERLLLPKVTHATPAAGQSGD 673
>gi|154148946|ref|YP_001406234.1| putative inner membrane protein translocase component YidC
[Campylobacter hominis ATCC BAA-381]
gi|153804955|gb|ABS51962.1| inner membrane protein, 60 kDa [Campylobacter hominis ATCC BAA-381]
Length = 532
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 123/254 (48%), Gaps = 42/254 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I+ M LK L + +G+AI+++T+IV+A +PL+ K + S M+
Sbjct: 313 WFTFISKPMFGFLKWLHNYTGN------WGWAIVIMTLIVRAILYPLSYKGMLSMNKMKD 366
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K +Q RY GD +++Q LYK +NP+ GCLP L +P++ +YR L N A
Sbjct: 367 LAPKMKELQARYKGDPKKLQTSMMELYKKNNVNPMGGCLPILLQVPIFFAIYRVLLN-AI 425
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E E FWI L+ Y +LP+ + +
Sbjct: 426 ELKGAEWAFWIHDLSVKD------------------------------PYFILPITMGIL 455
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ K I + DP + + FLPL+ +F ++ P+GL+LYW NNL S QQ
Sbjct: 456 MFLQQK-ITPTNFTDP---MQEKIMKFLPLIFTFFFMAFPAGLTLYWTVNNLASIIQQYT 511
Query: 333 LQK-FGGAKDPMKQ 345
+ K F K +K+
Sbjct: 512 INKMFAKHKAAIKE 525
>gi|313893458|ref|ZP_07827028.1| stage III sporulation protein J [Veillonella sp. oral taxon 158
str. F0412]
gi|313441901|gb|EFR60323.1| stage III sporulation protein J [Veillonella sp. oral taxon 158
str. F0412]
Length = 222
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 120/246 (48%), Gaps = 44/246 (17%)
Query: 101 METVLKVLKDGMSTLHVPYA-----------YGFAIILLTVIVKAATFPLTKKQVESSMA 149
+ +V + + D MS+L V YA YG AIILLT+ +KA PLT KQ++S A
Sbjct: 4 LSSVFQPIVDLMSSL-VTYAFQLTQMVGYPSYGVAIILLTIFIKAILAPLTVKQIKSMKA 62
Query: 150 MRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSN 209
M+ L P+++ +Q +Y D R+Q E LYK G+NPLAGCLP L +P I ++ AL
Sbjct: 63 MQELQPRMQELQNKYKNDPARLQAEMGALYKEMGVNPLAGCLPLLVQMPFLIAIFYALQG 122
Query: 210 VADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLL 269
+ + F W+PSL P + +LPVL
Sbjct: 123 YPYDQNYVQ-FLWLPSLGEPDPMY------------------------------ILPVLS 151
Query: 270 VVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
S +I K S + + +T F+PL IGY +L+ PSGL +YW +N+ Q
Sbjct: 152 AASTWIMSKQTGSGATGAAA-QQQKIMTIFMPLFIGYISLNFPSGLVIYWIVSNVFQFVQ 210
Query: 330 QVWLQK 335
Q ++ K
Sbjct: 211 QHFIYK 216
>gi|116329466|ref|YP_799186.1| preprotein translocase, YidC subunit [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116329930|ref|YP_799648.1| preprotein translocase, YidC subunit [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
gi|122282297|sp|Q04W30.1|YIDC_LEPBJ RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|122282754|sp|Q04XE2.1|YIDC_LEPBL RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|116122210|gb|ABJ80253.1| Preprotein translocase, YidC subunit [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116123619|gb|ABJ74890.1| Preprotein translocase, YidC subunit [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
Length = 622
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 113/213 (53%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ ES M+ L+PQ+K I E++A D + Q +T LYK
Sbjct: 418 YGWSIIIFAILFKLVFYPLNQKQAESMKKMQELSPQLKTINEKFANDPKMRQQKTMELYK 477
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 478 KNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI-------- 527
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + P +L +L+V +Q ++ +S + DPN K L +
Sbjct: 528 --WTSPAI----PYFTQTGIGLNLLALLMVGTQIFQTRM--TSVSMDPNQK---MLMYVM 576
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 577 PVMMLYIFWNMPSGVTLYWTFQNVLSIGQQ-WV 608
>gi|320536044|ref|ZP_08036102.1| membrane protein insertase, YidC/Oxa1 family protein [Treponema
phagedenis F0421]
gi|320147094|gb|EFW38652.1| membrane protein insertase, YidC/Oxa1 family protein [Treponema
phagedenis F0421]
Length = 609
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 114/215 (53%), Gaps = 16/215 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIIL+T+++K +PLTKK +S M+ L PQ++ IQ +Y + +++ E A+ YK
Sbjct: 389 WGVAIILVTLLIKLLFYPLTKKSFVASQRMQELQPQMQTIQAKYKNNPQKLNEEMAKFYK 448
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
AG NPL+GCL L +P +YR +N + WIP L+ +I
Sbjct: 449 EAGYNPLSGCLTLLVQMPFLFAMYRLFNNYFEFRGAMFIPHWIPDLSIGDSI-------- 500
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W PF P GW+D +LP+L VVSQ + KI Q N S + + F+
Sbjct: 501 --WKLPFT--VPFFGWTDL---RLLPILYVVSQIVFSKITQPPATEQQN-SSMKMMLYFM 552
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P+ + + PSGL +YW NL++ QQ+++++
Sbjct: 553 PVFFFFLFYNAPSGLLVYWTAMNLMTLVQQLFIKQ 587
>gi|420437846|ref|ZP_14936826.1| inner membrane protein oxaA [Helicobacter pylori Hp H-28]
gi|393050773|gb|EJB51727.1| inner membrane protein oxaA [Helicobacter pylori Hp H-28]
Length = 548
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 110/215 (51%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + FL
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKFL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|357975435|ref|ZP_09139406.1| membrane protein insertase [Sphingomonas sp. KC8]
Length = 568
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 114/214 (53%), Gaps = 19/214 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLT IV+ FP+ +KQ S AMR++ P++K +Q+R+ D++++Q E LY+
Sbjct: 359 FGVAIILLTCIVRGLMFPIAQKQFASMAAMRAVQPKMKELQDRHKDDKQKLQQELLALYQ 418
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGS 239
+NPLAGCLP L IP++ LY+ L + + + F WI L+ P +
Sbjct: 419 KEKVNPLAGCLPILLQIPIFYALYKVLMLTIE--MRHQPFIGWIKDLSAPDPMTPLN--- 473
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
LF +D PP A VLP+LL ++ Y+ K+ N P Q + +
Sbjct: 474 ----LFGLLDFTPP----AFLAIGVLPILLGITMYLQFKL-----NPAPMDPIQQQVFSI 520
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
+P + + +GL LYW +NLL+ AQQ WL
Sbjct: 521 MPWIFMFIMAPFAAGLQLYWTVSNLLTIAQQKWL 554
>gi|444374843|ref|ZP_21174146.1| membrane protein insertase [Helicobacter pylori A45]
gi|443620702|gb|ELT81145.1| membrane protein insertase [Helicobacter pylori A45]
Length = 548
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 110/215 (51%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + FL
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKFL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|167629167|ref|YP_001679666.1| stage iii sporulation protein j/oxaa-like protein [Heliobacterium
modesticaldum Ice1]
gi|167591907|gb|ABZ83655.1| stage iii sporulation protein j/oxaa-like protein precursor
[Heliobacterium modesticaldum Ice1]
Length = 222
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 32/217 (14%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YG AIIL+T+++K +PL+ KQ++S M LAP+ KA+QE+Y D ++ Q +LY
Sbjct: 27 SYGLAIILITIVIKMLLYPLSAKQMKSMKVMAELAPKQKALQEKYKKDPQKAQEAMMQLY 86
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
K G+NPL+GCLP L P+ I Y L F W+ +L+ P
Sbjct: 87 KEHGVNPLSGCLPLLIQFPILIAFYNGLMAFPYLNEAHATFLWVANLSAP---------- 136
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
D + +LP+L + ++ +K+ SS +P + +Q + +
Sbjct: 137 ------------------DPY---ILPLLATATTFLQMKVTPSSAGGNPQAEQTQKIMMY 175
Query: 300 -LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+PL+IG+ A S +GLSLYW T N + QQ+++ +
Sbjct: 176 SMPLLIGWMAHSFAAGLSLYWVTFNTVGILQQLYMNR 212
>gi|420494708|ref|ZP_14993275.1| inner membrane protein oxaA [Helicobacter pylori Hp P-16]
gi|393109863|gb|EJC10391.1| inner membrane protein oxaA [Helicobacter pylori Hp P-16]
Length = 546
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 111/223 (49%), Gaps = 35/223 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K IQE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKEIQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + FL
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKFL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPM 343
PL+ F ++ P+GL LYW TNN+LS QQ+ + K K M
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILENKKRM 538
>gi|157737856|ref|YP_001490540.1| inner membrane protein translocase component YidC [Arcobacter
butzleri RM4018]
gi|157699710|gb|ABV67870.1| inner membrane protein, 60 kDa [Arcobacter butzleri RM4018]
Length = 533
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 118/243 (48%), Gaps = 41/243 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M +L+ L+ + +G+ I+ LT++VK +PL+ K + S ++
Sbjct: 322 WFTFIAKPMFVLLQFLQSYIGN------WGWTIVALTILVKVVLYPLSYKGMVSMQKLKD 375
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K IQ +Y D+++ + LYK G NP+ GCLP + IP++ +YR L N A
Sbjct: 376 LAPKMKEIQLKYKDDKQKQSMHMMELYKKHGANPMGGCLPLILQIPIFFAIYRVLIN-AI 434
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E E FWI LA + PF VLP+L+ +
Sbjct: 435 ELKGAEWIFWIHDLAA---------------MDPF---------------FVLPILMGAT 464
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
YI +I ++ ++ K Q LP++ +F L P+GL+LYWF NNL + QQ
Sbjct: 465 MYIQQRITPTTVQDELQKKIFQ----LLPIVFTFFFLWFPAGLTLYWFVNNLFTIGQQYV 520
Query: 333 LQK 335
+ K
Sbjct: 521 INK 523
>gi|399048549|ref|ZP_10740034.1| membrane protein insertase, YidC/Oxa1 family [Brevibacillus sp.
CF112]
gi|398053611|gb|EJL45785.1| membrane protein insertase, YidC/Oxa1 family [Brevibacillus sp.
CF112]
Length = 252
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 113/220 (51%), Gaps = 36/220 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YGF I++ TVI++ PL KQ++SS M+ L P+++ I+E+Y D ++ Q ET +++
Sbjct: 60 YGFGILVATVIIRLIVLPLMVKQIKSSKKMQELQPEMQKIREKYKNDPQKAQQETMAVFQ 119
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G+NPLAGCLP L +P+ I Y A+ + E + T+ F W+
Sbjct: 120 KNGVNPLAGCLPMLVQMPILIAFYHAI--IRTEEIKTQTFLWLT---------------- 161
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
LG D Y +LP++ ++ Y+ K++ + +P M Q + +
Sbjct: 162 -------------LGEKD--PYYILPIIAAITTYLQSKMMGQATQGNPQM---QMMLVMM 203
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
PLMI A+++PS LSLYW NL + Q +L + G K
Sbjct: 204 PLMILAIAVTLPSALSLYWVYGNLFTIVQTYFLYRDKGNK 243
>gi|156741411|ref|YP_001431540.1| hypothetical protein Rcas_1427 [Roseiflexus castenholzii DSM 13941]
gi|156232739|gb|ABU57522.1| 60 kDa inner membrane insertion protein [Roseiflexus castenholzii
DSM 13941]
Length = 345
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 122/235 (51%), Gaps = 24/235 (10%)
Query: 122 GFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKL 181
G AIIL T++ + PLT K ++SS M+ L P +K +Q +Y D +++Q ET RLY+
Sbjct: 26 GLAIILFTIVARLLILPLTIKSLQSSRKMQELQPHMKELQRKYGKDPQKLQEETMRLYRE 85
Query: 182 AGINPLAGCLPTLATIPVWIGLYRALSNV--------ADEGLL----TEGFFWIPSLAGP 229
+NP+ GCLP L +P+++G+Y+A+ N+ A +L +G + S A
Sbjct: 86 YKVNPVGGCLPMLLQLPIFLGVYQAVINLTRVSPAEHAGSAMLRVLNEQGIAF--STATT 143
Query: 230 TTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPN 289
T+ Q WL P LG +D Y +LP+L V+ Q I V+++ + + DP
Sbjct: 144 ATLGQPQLAGSFLWL-------PDLGKTD--PYYILPILSVIFQLI-VQLMATPRIQDPQ 193
Query: 290 MKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMK 344
K+ LP++ GY PSG LYW ++LS QQ + +G + +K
Sbjct: 194 QKAMMQSMLILPIVFGYIGFIFPSGAVLYWVVGSILSIIQQYVISGWGSLANYLK 248
>gi|325969856|ref|YP_004246047.1| membrane protein oxaA [Sphaerochaeta globus str. Buddy]
gi|324025094|gb|ADY11853.1| Membrane protein oxaA [Sphaerochaeta globus str. Buddy]
Length = 604
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 151/326 (46%), Gaps = 34/326 (10%)
Query: 17 PNRTDIQTPLFTRTHFGLKPFLRGSICVAKFGLRPDPNSADGVKELLGVAERLLFTLADA 76
P+ T+ L + GL L+ SI + + +R + D + G + T+ D
Sbjct: 280 PDATNYTVSLSETSEEGLP--LQSSIYITRPAIR-SASQTDTFRFYAGPQLKGDMTIYDD 336
Query: 77 AVSSSDAVTTTK-----QNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVI 131
A S+S V + +S WL + +++T+L +L + YG II+LT +
Sbjct: 337 ASSNSFGVANLQLEQALDSSSWLGWLETILKTILNLLYKVIPN------YGVGIIILTFL 390
Query: 132 VKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCL 191
+K +P++KK +ES+ M SL+P++ I+E+Y + + E A LYK INP+ GCL
Sbjct: 391 LKLVLYPISKKGMESTAKMSSLSPKMAEIKEKYPDNPTKQNEEMATLYKKEKINPMGGCL 450
Query: 192 PTLATIPVWIGLYRALSNVAD--EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVD 249
P L P+ I Y L+ + + G WIP L+ P T+ + PF+
Sbjct: 451 PMLLQFPILIAFYGLLNKHFELRGAMFIPG--WIPDLSMPDTVFT------FGFNLPFLG 502
Query: 250 GHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFAL 309
L LP++ VS S+KI Q++ + +T +PLM +
Sbjct: 503 NQLHL----------LPIVYTVSMIYSMKITQNASTAGSQQGMMKFMTYGMPLMFFFVLY 552
Query: 310 SVPSGLSLYWFTNNLLSTAQQVWLQK 335
+ PSGL LYW N LS QQ++ K
Sbjct: 553 NAPSGLILYWSVMNALSIFQQLYTNK 578
>gi|417771775|ref|ZP_12419667.1| 60Kd inner membrane protein [Leptospira interrogans serovar Pomona
str. Pomona]
gi|418683831|ref|ZP_13245026.1| 60Kd inner membrane protein [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|400324580|gb|EJO76874.1| 60Kd inner membrane protein [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|409946188|gb|EKN96200.1| 60Kd inner membrane protein [Leptospira interrogans serovar Pomona
str. Pomona]
gi|455666466|gb|EMF31884.1| 60Kd inner membrane protein [Leptospira interrogans serovar Pomona
str. Fox 32256]
Length = 630
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 111/213 (52%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ +S M+ L+PQ+K I E++A D + Q +T LYK
Sbjct: 425 YGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELYK 484
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 485 KNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI-------- 534
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + G +L +L+V +Q ++ S DPN K L +
Sbjct: 535 --WTSPAIPYFTQTG----IGLNLLALLMVGTQVFQTRMTSVSM--DPNQK---MLMYVM 583
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 584 PVMMLYIFWNMPSGVTLYWTFQNVLSIGQQ-WI 615
>gi|418689236|ref|ZP_13250358.1| 60Kd inner membrane protein [Leptospira interrogans str. FPW2026]
gi|418698457|ref|ZP_13259434.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|418705458|ref|ZP_13266323.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|421115749|ref|ZP_15576148.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|421124342|ref|ZP_15584599.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421133637|ref|ZP_15593783.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|400361381|gb|EJP17347.1| 60Kd inner membrane protein [Leptospira interrogans str. FPW2026]
gi|410012682|gb|EKO70774.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410022082|gb|EKO88861.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410437473|gb|EKP86572.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410762600|gb|EKR28761.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410765309|gb|EKR36011.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Hebdomadis str. R499]
Length = 630
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 111/213 (52%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ +S M+ L+PQ+K I E++A D + Q +T LYK
Sbjct: 425 YGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELYK 484
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 485 KNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI-------- 534
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + G +L +L+V +Q ++ S DPN K L +
Sbjct: 535 --WTSPAIPYFTQTG----IGLNLLALLMVGTQVFQTRMTSVSM--DPNQK---MLMYVM 583
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 584 PVMMLYIFWNMPSGVTLYWTFQNVLSIGQQ-WI 615
>gi|302872912|ref|YP_003841548.1| YidC/Oxa1 family membrane protein insertase [Caldicellulosiruptor
obsidiansis OB47]
gi|302575771|gb|ADL43562.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor
obsidiansis OB47]
Length = 341
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 124/260 (47%), Gaps = 28/260 (10%)
Query: 90 NSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMA 149
N WL + + +LK++ D + H+P +YG A+ILLT+IV+ PL KQ+ S
Sbjct: 2 NPTWLDFLAIPLGRLLKLIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIHSMSK 61
Query: 150 MRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSN 209
M +AP+++ IQ++Y DQ+++Q E +LY+ G NP AGC P L +P+ LY N
Sbjct: 62 MAEVAPRLQEIQQKYKNDQKKLQEEMLKLYQETGYNPAAGCWPLLIQMPILFSLYYVFQN 121
Query: 210 VADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTF--------A 261
+L + ++ L T G GI+ VD LG F
Sbjct: 122 PLVY-VLGKSHQYVRDLVTGAT------GYGITQ--RIVDEAQKLGLDMHFLGINLAKKE 172
Query: 262 YLVLPVLLVVSQYISVKIIQSSQNN-DPNMKSSQ----------ALTNFLPLMIGYFALS 310
LVLP+L + +SV +SQ +P SQ + PLM + AL
Sbjct: 173 LLVLPILSAATMLLSVWFSSNSQKKFNPQYSQSQSNAMAESMNRSFMIISPLMSYFIALQ 232
Query: 311 VPSGLSLYWFTNNLLSTAQQ 330
VPSGL LYW NL + QQ
Sbjct: 233 VPSGLVLYWTVTNLFTILQQ 252
>gi|226942148|ref|YP_002797222.1| inner membrane protein translocase component YidC [Laribacter
hongkongensis HLHK9]
gi|254772999|sp|C1D6H8.1|YIDC_LARHH RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|226717075|gb|ACO76213.1| YidC [Laribacter hongkongensis HLHK9]
Length = 550
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 114/240 (47%), Gaps = 38/240 (15%)
Query: 96 GITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAP 155
G ++ T L L D + L + +G+AI+LLTV+VKAA +PL+ S M++LAP
Sbjct: 337 GWVTIIATPLFWLLDKLYGLV--HNWGWAIVLLTVLVKAAFYPLSAASYRSMAKMKALAP 394
Query: 156 QVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGL 215
+++ ++E+Y D+++ Q T +YK +NPL GCLP + IPV+IGLY AL + E
Sbjct: 395 RMQRLKEQYGDDRQKFQQATMEMYKTEKVNPLGGCLPIVVQIPVFIGLYWALL-ASVELR 453
Query: 216 LTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYI 275
WI LA P Y +LP L+ + Y+
Sbjct: 454 QAPWILWIHDLAKPD------------------------------PYYILPALMAATMYL 483
Query: 276 SVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
Q+ N P + +PL P+GL LYW NN+LS AQQ W+ K
Sbjct: 484 -----QTFLNPPPADPLQAKMMKIMPLAFSVMFFFFPAGLVLYWLVNNILSIAQQWWVNK 538
>gi|418713075|ref|ZP_13273802.1| 60Kd inner membrane protein [Leptospira interrogans str. UI 08452]
gi|410790158|gb|EKR83852.1| 60Kd inner membrane protein [Leptospira interrogans str. UI 08452]
Length = 630
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 111/213 (52%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ +S M+ L+PQ+K I E++A D + Q +T LYK
Sbjct: 425 YGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELYK 484
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 485 KNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI-------- 534
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + G +L +L+V +Q ++ S DPN K L +
Sbjct: 535 --WTSPAIPYFTQTG----IGLNLLALLMVGTQVFQTRMTSVSM--DPNQK---MLMYVM 583
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 584 PVMMLYIFWNMPSGVTLYWTFQNVLSIGQQ-WI 615
>gi|384156218|ref|YP_005539033.1| putative inner membrane protein translocase component [Arcobacter
butzleri ED-1]
gi|345469772|dbj|BAK71223.1| putative inner membrane protein translocase component [Arcobacter
butzleri ED-1]
Length = 517
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 118/243 (48%), Gaps = 41/243 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M +L+ L+ + +G+ I+ LT++VK +PL+ K + S ++
Sbjct: 306 WFTFIAKPMFVLLQFLQSYIGN------WGWTIVALTILVKLVLYPLSYKGMVSMQKLKD 359
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K IQ +Y D+++ + LYK G NP+ GCLP + IP++ +YR L N A
Sbjct: 360 LAPKMKEIQLKYKDDKQKQSMHMMELYKKHGANPMGGCLPLILQIPIFFAIYRVLIN-AI 418
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E E FWI LA + PF VLP+L+ +
Sbjct: 419 ELKGAEWIFWIHDLAA---------------MDPF---------------FVLPILMGAT 448
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
YI +I ++ ++ K Q LP++ +F L P+GL+LYWF NNL + QQ
Sbjct: 449 MYIQQRITPTTVQDELQKKIFQ----LLPIVFTFFFLWFPAGLTLYWFVNNLFTIGQQYV 504
Query: 333 LQK 335
+ K
Sbjct: 505 INK 507
>gi|418727008|ref|ZP_13285607.1| 60Kd inner membrane protein [Leptospira interrogans str. UI 12621]
gi|409959755|gb|EKO23521.1| 60Kd inner membrane protein [Leptospira interrogans str. UI 12621]
Length = 630
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 111/213 (52%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ +S M+ L+PQ+K I E++A D + Q +T LYK
Sbjct: 425 YGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELYK 484
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 485 KNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI-------- 534
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + G +L +L+V +Q ++ S DPN K L +
Sbjct: 535 --WTSPAIPYFTQTG----IGLNLLALLMVGTQVFQTRMTSVSM--DPNQK---MLMYVM 583
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 584 PVMMLYIFWNMPSGVTLYWTFQNVLSIGQQ-WI 615
>gi|418693674|ref|ZP_13254724.1| 60Kd inner membrane protein [Leptospira kirschneri str. H1]
gi|421106860|ref|ZP_15567424.1| 60Kd inner membrane protein [Leptospira kirschneri str. H2]
gi|409958700|gb|EKO17591.1| 60Kd inner membrane protein [Leptospira kirschneri str. H1]
gi|410008326|gb|EKO62001.1| 60Kd inner membrane protein [Leptospira kirschneri str. H2]
Length = 627
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 113/213 (53%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ +S M+ L+PQ+K I E++A D + Q +T LYK
Sbjct: 422 YGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELYK 481
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 482 KNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI-------- 531
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + P +L +L+V +Q ++ +S + DPN K L +
Sbjct: 532 --WTSPAI----PYFTQTGIGLNLLALLMVGTQVFQTRM--TSVSMDPNQK---MLMYVM 580
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 581 PVMMLYIFWNMPSGVTLYWTFQNVLSIGQQ-WI 612
>gi|386284542|ref|ZP_10061763.1| membrane protein insertase [Sulfurovum sp. AR]
gi|385344471|gb|EIF51186.1| membrane protein insertase [Sulfurovum sp. AR]
Length = 532
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 117/245 (47%), Gaps = 49/245 (20%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W S + VL + D + +G+AIIL T++VK FPL+ K + S ++
Sbjct: 313 WFSFLAKPFFKVLLWINDYVGN------WGWAIILFTLLVKFVLFPLSYKGMMSMNKLKD 366
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K I+E+Y GD ++ ++ +YK G NP+ GCLP L IPV+ LYR L N AD
Sbjct: 367 LAPKMKEIKEKYKGDPAKMNVQMMEMYKKHGANPMGGCLPLLLQIPVFFALYRVLLN-AD 425
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFA----YLVLPVL 268
E G+G W+ W D A Y VLPVL
Sbjct: 426 E----------------------LQGAG--WIL----------WIDNLAVMDPYFVLPVL 451
Query: 269 LVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTA 328
+ S + K I S DP + + + P+++ F + PSGL LYW NNL + A
Sbjct: 452 MGASMWFQQK-ITPSNFTDP---LQEKIFKWFPVIMTVFFIYFPSGLVLYWLVNNLFTIA 507
Query: 329 QQVWL 333
QQ ++
Sbjct: 508 QQYFI 512
>gi|119953231|ref|YP_945440.1| putative inner membrane protein translocase component YidC
[Borrelia turicatae 91E135]
gi|254772754|sp|A1QZM8.1|YIDC_BORT9 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|119862002|gb|AAX17770.1| 60 kDa inner membrane protein YidC [Borrelia turicatae 91E135]
Length = 545
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 121/235 (51%), Gaps = 26/235 (11%)
Query: 101 METVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAI 160
M+ ++++ D + +G +II LT++V+ FPLT K ++ + L P++K I
Sbjct: 327 MQLIMQIFYDVIPN------WGLSIIFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEI 380
Query: 161 QERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF 220
Q ++ D +R+ E +LY+ G+NPL GCLP L +PV+ LY ++N L G
Sbjct: 381 QVKFKNDPKRLNEEMGKLYREEGVNPLGGCLPILLQLPVFFALYGLVNNF----FLLRGA 436
Query: 221 FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII 280
+IP +I G I + G+ W+D +LP +++++Q +S I
Sbjct: 437 SFIPGWIDDLSI-----GDSIYYF-----GYKVFVWTDI---RILPFIMMITQLLST--I 481
Query: 281 QSSQNNDPNMKSSQALTNF-LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
SS + N+ S Q F +P+M + +PSGL +YW T N+ + QQ +++
Sbjct: 482 ISSNVSFKNLGSQQKFLYFGMPIMFFFILYDMPSGLLIYWITTNIFTILQQYYIK 536
>gi|418707772|ref|ZP_13268592.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410772193|gb|EKR47387.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
Length = 630
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 111/213 (52%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ +S M+ L+PQ+K I E++A D + Q +T LYK
Sbjct: 425 YGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELYK 484
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 485 KNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI-------- 534
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + G +L +L+V +Q ++ S DPN K L +
Sbjct: 535 --WTSPAIPYFTQTG----IGLNLLALLMVGTQVFQTRMTSVSM--DPNQK---MLMYVM 583
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 584 PVMMLYIFWNMPSGVTLYWTFQNVLSIGQQ-WI 615
>gi|410938908|ref|ZP_11370748.1| 60Kd inner membrane protein [Leptospira noguchii str. 2006001870]
gi|410786109|gb|EKR75060.1| 60Kd inner membrane protein [Leptospira noguchii str. 2006001870]
Length = 627
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 111/213 (52%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ +S M+ L+PQ+K I E++A D + Q +T LYK
Sbjct: 422 YGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELYK 481
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 482 KNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI-------- 531
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + G +L +L+V +Q ++ S DPN K L +
Sbjct: 532 --WTSPAIPYFTQTG----IGLNLLALLMVGTQVFQTRMTSVSM--DPNQK---MLMYVM 580
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 581 PVMMLYIFWNMPSGVTLYWTFQNVLSIGQQ-WI 612
>gi|418678579|ref|ZP_13239853.1| 60Kd inner membrane protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418684455|ref|ZP_13245640.1| 60Kd inner membrane protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418740496|ref|ZP_13296873.1| 60Kd inner membrane protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
gi|421088358|ref|ZP_15549183.1| 60Kd inner membrane protein [Leptospira kirschneri str. 200802841]
gi|421129789|ref|ZP_15589989.1| 60Kd inner membrane protein [Leptospira kirschneri str. 2008720114]
gi|400321769|gb|EJO69629.1| 60Kd inner membrane protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410002989|gb|EKO53438.1| 60Kd inner membrane protein [Leptospira kirschneri str. 200802841]
gi|410359164|gb|EKP06273.1| 60Kd inner membrane protein [Leptospira kirschneri str. 2008720114]
gi|410741154|gb|EKQ85867.1| 60Kd inner membrane protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410751873|gb|EKR08849.1| 60Kd inner membrane protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
Length = 627
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 113/213 (53%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ +S M+ L+PQ+K I E++A D + Q +T LYK
Sbjct: 422 YGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELYK 481
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 482 KNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI-------- 531
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + P +L +L+V +Q ++ +S + DPN K L +
Sbjct: 532 --WTSPAI----PYFTQTGIGLNLLALLMVGTQVFQTRM--TSVSMDPNQK---MLMYVM 580
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 581 PVMMLYIFWNMPSGVTLYWTFQNVLSIGQQ-WI 612
>gi|417768054|ref|ZP_12415989.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400349499|gb|EJP01792.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
Length = 627
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 113/213 (53%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ +S M+ L+PQ+K I E++A D + Q +T LYK
Sbjct: 422 YGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELYK 481
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 482 KNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI-------- 531
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + G +L +L+V +Q ++ +S + DPN K L +
Sbjct: 532 --WTSPAIPYFTQTG----IGLNLLALLMVGTQVFQTRM--TSVSMDPNQK---MLMYVM 580
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 581 PVMMLYIFWNMPSGVTLYWTFQNVLSIGQQ-WI 612
>gi|417781805|ref|ZP_12429541.1| 60Kd inner membrane protein [Leptospira weilii str. 2006001853]
gi|410777991|gb|EKR62633.1| 60Kd inner membrane protein [Leptospira weilii str. 2006001853]
Length = 623
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 111/213 (52%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ +S M+ L+PQ+K I E++A D + Q +T LYK
Sbjct: 419 YGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKARQQKTMELYK 478
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 479 KNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI-------- 528
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + P +L +L+V +Q ++ S DPN K L +
Sbjct: 529 --WTSPAI----PYFTQTGIGLNLLALLMVGTQIFQTRMTSVSM--DPNQK---MLMYVM 577
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 578 PVMMLYIFWNMPSGVTLYWTFQNVLSIGQQ-WV 609
>gi|24212878|ref|NP_710359.1| preprotein translocase subunit YidC [Leptospira interrogans serovar
Lai str. 56601]
gi|386072636|ref|YP_005986953.1| preprotein translocase subunit YidC [Leptospira interrogans serovar
Lai str. IPAV]
gi|417784835|ref|ZP_12432540.1| 60Kd inner membrane protein [Leptospira interrogans str. C10069]
gi|418669847|ref|ZP_13231221.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|418730731|ref|ZP_13289207.1| 60Kd inner membrane protein [Leptospira interrogans str. UI 12758]
gi|421122952|ref|ZP_15583234.1| 60Kd inner membrane protein [Leptospira interrogans str. Brem 329]
gi|38502900|sp|P97041.2|YIDC_LEPIN RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|24193541|gb|AAN47377.1| preprotein translocase subunit YidC [Leptospira interrogans serovar
Lai str. 56601]
gi|353456425|gb|AER00970.1| preprotein translocase subunit YidC [Leptospira interrogans serovar
Lai str. IPAV]
gi|409951624|gb|EKO06138.1| 60Kd inner membrane protein [Leptospira interrogans str. C10069]
gi|410343696|gb|EKO94891.1| 60Kd inner membrane protein [Leptospira interrogans str. Brem 329]
gi|410754137|gb|EKR15792.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410774293|gb|EKR54301.1| 60Kd inner membrane protein [Leptospira interrogans str. UI 12758]
Length = 627
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 111/213 (52%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ +S M+ L+PQ+K I E++A D + Q +T LYK
Sbjct: 422 YGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELYK 481
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 482 KNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI-------- 531
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + G +L +L+V +Q ++ S DPN K L +
Sbjct: 532 --WTSPAIPYFTQTG----IGLNLLALLMVGTQVFQTRMTSVSM--DPNQK---MLMYVM 580
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 581 PVMMLYIFWNMPSGVTLYWTFQNVLSIGQQ-WI 612
>gi|45656063|ref|YP_000149.1| hypothetical protein LIC10157 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|417763055|ref|ZP_12411038.1| 60Kd inner membrane protein [Leptospira interrogans str.
2002000624]
gi|417774543|ref|ZP_12422407.1| 60Kd inner membrane protein [Leptospira interrogans str.
2002000621]
gi|418672149|ref|ZP_13233491.1| 60Kd inner membrane protein [Leptospira interrogans str.
2002000623]
gi|421087784|ref|ZP_15548620.1| 60Kd inner membrane protein [Leptospira santarosai str. HAI1594]
gi|421104233|ref|ZP_15564828.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|73921529|sp|Q72VY8.1|YIDC_LEPIC RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|1902825|dbj|BAA19448.1| ORF2 [Leptospira interrogans]
gi|2780768|dbj|BAA24371.1| ORF2; putative [Leptospira interrogans]
gi|45599296|gb|AAS68786.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|409941111|gb|EKN86745.1| 60Kd inner membrane protein [Leptospira interrogans str.
2002000624]
gi|410365685|gb|EKP21078.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410430033|gb|EKP74408.1| 60Kd inner membrane protein [Leptospira santarosai str. HAI1594]
gi|410575385|gb|EKQ38403.1| 60Kd inner membrane protein [Leptospira interrogans str.
2002000621]
gi|410580753|gb|EKQ48572.1| 60Kd inner membrane protein [Leptospira interrogans str.
2002000623]
Length = 627
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 111/213 (52%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ +S M+ L+PQ+K I E++A D + Q +T LYK
Sbjct: 422 YGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELYK 481
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 482 KNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI-------- 531
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + G +L +L+V +Q ++ S DPN K L +
Sbjct: 532 --WTSPAIPYFTQTG----IGLNLLALLMVGTQVFQTRMTSVSM--DPNQK---MLMYVM 580
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 581 PVMMLYIFWNMPSGVTLYWTFQNVLSIGQQ-WI 612
>gi|420397661|ref|ZP_14896877.1| inner membrane protein oxaA [Helicobacter pylori CPY1313]
gi|393011206|gb|EJB12394.1| inner membrane protein oxaA [Helicobacter pylori CPY1313]
Length = 546
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 111/215 (51%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIIFLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS DP + FL
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSV-TDP---MQAKIFKFL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|420491754|ref|ZP_14990330.1| inner membrane protein oxaA [Helicobacter pylori Hp P-15]
gi|420525520|ref|ZP_15023923.1| inner membrane protein oxaA [Helicobacter pylori Hp P-15b]
gi|393108449|gb|EJC08983.1| inner membrane protein oxaA [Helicobacter pylori Hp P-15]
gi|393133541|gb|EJC33957.1| inner membrane protein oxaA [Helicobacter pylori Hp P-15b]
Length = 548
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 111/223 (49%), Gaps = 35/223 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + FL
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKFL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPM 343
PL+ F ++ P+GL LYW TNN+LS QQ+ + K K M
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILENKKRM 540
>gi|421715647|ref|ZP_16154962.1| inner membrane protein oxaA [Helicobacter pylori R036d]
gi|407214505|gb|EKE84351.1| inner membrane protein oxaA [Helicobacter pylori R036d]
Length = 548
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + FL
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKFL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|298735584|ref|YP_003728107.1| preprotein translocase subunit YidC [Helicobacter pylori B8]
gi|298354771|emb|CBI65643.1| preprotein translocase YidC subunit [Helicobacter pylori B8]
Length = 544
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 111/223 (49%), Gaps = 35/223 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 349 WGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 408
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 409 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 454
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + FL
Sbjct: 455 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKFL 493
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPM 343
PL+ F ++ P+GL LYW TNN+LS QQ+ + K K M
Sbjct: 494 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILENKKRM 536
>gi|384888295|ref|YP_005762806.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori 52]
gi|261840125|gb|ACX99890.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori 52]
Length = 544
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 110/215 (51%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 349 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 408
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 409 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 454
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + FL
Sbjct: 455 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKFL 493
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 494 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 528
>gi|420434720|ref|ZP_14933720.1| inner membrane protein oxaA [Helicobacter pylori Hp H-27]
gi|393052488|gb|EJB53434.1| inner membrane protein oxaA [Helicobacter pylori Hp H-27]
Length = 548
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 111/223 (49%), Gaps = 35/223 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + FL
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKFL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPM 343
PL+ F ++ P+GL LYW TNN+LS QQ+ + K K M
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILENKKRM 540
>gi|332186329|ref|ZP_08388074.1| Inner membrane protein translocase component YidC, long form
[Sphingomonas sp. S17]
gi|332013697|gb|EGI55757.1| Inner membrane protein translocase component YidC, long form
[Sphingomonas sp. S17]
Length = 565
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 116/224 (51%), Gaps = 20/224 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLTV ++A FP+ ++Q S AMR++ P++KA+QERY D+ R+Q E LYK
Sbjct: 357 FGVAIILLTVTIRALMFPIAQRQFASMAAMRAVQPKMKALQERYKDDKVRMQQEVMALYK 416
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGS 239
+NPLAGCLPTL IP++ LY+ L + + + F WI L+ P + N
Sbjct: 417 QEKVNPLAGCLPTLIQIPIFYALYKVLMLTIE--MRHQPFVAWIKDLSAPDPLTP-VNLF 473
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
G L PF H A V+P+LL +S Y K+ N P + + +
Sbjct: 474 G---LLPFTPPH-------FIAIGVVPILLGISMYFQFKM-----NPQPMDDAQKQVFAI 518
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ-KFGGAKDP 342
LP ++ + GL +YW T N +S QQ L + G K P
Sbjct: 519 LPWVLMFVMAPFAVGLQVYWITTNCISILQQRLLYARHPGLKQP 562
>gi|308185213|ref|YP_003929346.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori SJM180]
gi|308061133|gb|ADO03029.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori SJM180]
Length = 548
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + FL
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKFL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|398332199|ref|ZP_10516904.1| preprotein translocase, YidC subunit [Leptospira alexanderi serovar
Manhao 3 str. L 60]
Length = 623
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 113/213 (53%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ +S M+ L+PQ+K I E++A D + Q +T LYK
Sbjct: 419 YGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKVRQQKTMELYK 478
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 479 KNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI-------- 528
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + P +L +L+V +Q ++ +S + DPN K L +
Sbjct: 529 --WTSPAI----PYFTQTGIGLNLLALLMVGTQIFQTRM--TSVSMDPNQK---MLMYVM 577
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 578 PVMMLYIFWNMPSGVTLYWTFQNVLSIGQQ-WV 609
>gi|338708463|ref|YP_004662664.1| membrane protein insertase, YidC/Oxa1 family [Zymomonas mobilis
subsp. pomaceae ATCC 29192]
gi|336295267|gb|AEI38374.1| membrane protein insertase, YidC/Oxa1 family [Zymomonas mobilis
subsp. pomaceae ATCC 29192]
Length = 580
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 124/245 (50%), Gaps = 23/245 (9%)
Query: 92 DWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMR 151
DW G ++E V D + LHV YG AIIL+ ++A FP+ KQ S +MR
Sbjct: 335 DW--GWFAIIEKVFFYYLDWL-FLHVG-NYGLAIILMVFTIRALIFPIANKQYASMASMR 390
Query: 152 SLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVA 211
L P+++A++ERY D +++ E LY+ +NP AGCLP P++I LY+ L V
Sbjct: 391 RLQPKMQAVRERYKNDDAKMRQELVTLYQKEKVNPFAGCLPMFIQFPIFIALYKTLL-VT 449
Query: 212 DEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYL-VLPVLLV 270
E WI L+ P + N G L PF H F + VLP++L
Sbjct: 450 IESRHQPFIGWIKDLSAPDPLTPF-NLFG---LLPFTPPH--------FLMIGVLPIILG 497
Query: 271 VSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
++ ++ + S Q DP + Q + +FLPL+ F + +GL +Y+ NNL+S AQ
Sbjct: 498 ITMWLQFR--ASPQQLDP---TQQQIMSFLPLVSVIFMAPLAAGLQVYYIFNNLVSLAQM 552
Query: 331 VWLQK 335
WLQ
Sbjct: 553 TWLQH 557
>gi|357419552|ref|YP_004932544.1| YidC/Oxa1 family membrane protein insertase [Thermovirga lienii DSM
17291]
gi|355397018|gb|AER66447.1| membrane protein insertase, YidC/Oxa1 family [Thermovirga lienii
DSM 17291]
Length = 260
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 132/248 (53%), Gaps = 17/248 (6%)
Query: 94 LSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSL 153
+S I L ++ +G+ +L ++YG AII+LT++V+ +PL+ KQ+ S M+ L
Sbjct: 1 MSAIWKAAGDFLILIINGLYSL--THSYGLAIIILTLLVRVLLYPLSHKQMVSMQKMQKL 58
Query: 154 APQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADE 213
P++K +QE+Y D+E + E RLYK +NP AGCLP L +P+ I L+R L N+
Sbjct: 59 QPRLKVLQEKYKDDKETLNKEIMRLYKENNVNPAAGCLPLLVQLPILILLFRVLMNLDLG 118
Query: 214 GLLTEGFFWIPSLAG------PTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPV 267
G G SL G + + A + GI LF + +P G + YL V
Sbjct: 119 GATFLGI----SLEGSVLSTMASAVGASADKIGIGALFSAIAANPA-GLLNVQMYLGNLV 173
Query: 268 LLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLST 327
LL+V +++ Q S ++P M Q + F+P + + LS+P G+ LYW ++L+
Sbjct: 174 LLLVIAFLTWYQQQLSGASNPQM---QFMNWFMPAFLTFICLSLPGGVLLYWGVSSLVGV 230
Query: 328 AQQVWLQK 335
AQQ W K
Sbjct: 231 AQQ-WYAK 237
>gi|433543006|ref|ZP_20499421.1| membrane protein OxaA precursor [Brevibacillus agri BAB-2500]
gi|432185680|gb|ELK43166.1| membrane protein OxaA precursor [Brevibacillus agri BAB-2500]
Length = 240
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 113/220 (51%), Gaps = 36/220 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YGF I++ TVI++ PL KQ++SS M+ L P+++ I+E+Y D ++ Q ET +++
Sbjct: 48 YGFGILVATVIIRLIVLPLMVKQIKSSKKMQELQPEMQKIREKYKNDPQKAQQETMAVFQ 107
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G+NPLAGCLP L +P+ I Y A+ + E + T+ F W+
Sbjct: 108 KNGVNPLAGCLPMLVQMPILIAFYHAI--IRTEEIKTQTFLWLT---------------- 149
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
LG D Y +LP++ ++ Y+ K++ + +P M Q + +
Sbjct: 150 -------------LGEKD--PYYILPIIAAITTYLQSKMMGQATQGNPQM---QMMLVMM 191
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
PLMI A+++PS LSLYW NL + Q +L + G K
Sbjct: 192 PLMILAIAVTLPSALSLYWVYGNLFTIVQTYFLYRDKGNK 231
>gi|359684451|ref|ZP_09254452.1| preprotein translocase, YidC subunit [Leptospira santarosai str.
2000030832]
Length = 620
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 112/213 (52%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ +S M+ L PQ+K I E++A D + Q +T LYK
Sbjct: 416 YGWSIIIFAILFKLVFYPLNQKQADSMKKMQELGPQLKTINEKFANDPKIRQQKTMELYK 475
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 476 KNNVNPVGGCLPMVIQIPIFIALYSAFSDTID--LWNSPFLWVKDLSEPDVI-------- 525
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + P +L +L+V +Q ++ +S + DPN K L +
Sbjct: 526 --WTSPAI----PYFTQTGIGLNLLALLMVGTQIFQTRM--TSVSMDPNQK---MLMYVM 574
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 575 PVMMLYIFWNMPSGVTLYWTFQNILSIGQQ-WI 606
>gi|422002746|ref|ZP_16349981.1| preprotein translocase, YidC subunit [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417258491|gb|EKT87878.1| preprotein translocase, YidC subunit [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 620
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 112/213 (52%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ +S M+ L PQ+K I E++A D + Q +T LYK
Sbjct: 416 YGWSIIIFAILFKLVFYPLNQKQADSMKKMQELGPQLKTINEKFANDPKIRQQKTMELYK 475
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 476 KNNVNPVGGCLPMVIQIPIFIALYSAFSDTID--LWNSPFLWVKDLSEPDVI-------- 525
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + P +L +L+V +Q ++ +S + DPN K L +
Sbjct: 526 --WTSPAI----PYFTQTGIGLNLLALLMVGTQIFQTRM--TSVSMDPNQK---MLMYVM 574
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 575 PVMMLYIFWNMPSGVTLYWTFQNILSIGQQ-WI 606
>gi|384894953|ref|YP_005769002.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori Sat464]
gi|308064207|gb|ADO06094.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori Sat464]
Length = 547
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 111/215 (51%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y + +++Q +LYK
Sbjct: 352 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKDEPQKLQAHMMQLYK 411
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 412 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 457
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS DP L FL
Sbjct: 458 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSV-TDP---MQAKLFKFL 496
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 497 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 531
>gi|418746189|ref|ZP_13302520.1| 60Kd inner membrane protein [Leptospira santarosai str. CBC379]
gi|418752899|ref|ZP_13309155.1| 60Kd inner membrane protein [Leptospira santarosai str. MOR084]
gi|409966582|gb|EKO34423.1| 60Kd inner membrane protein [Leptospira santarosai str. MOR084]
gi|410793020|gb|EKR90944.1| 60Kd inner membrane protein [Leptospira santarosai str. CBC379]
Length = 620
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 112/213 (52%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ +S M+ L PQ+K I E++A D + Q +T LYK
Sbjct: 416 YGWSIIIFAILFKLVFYPLNQKQADSMKKMQELGPQLKTINEKFANDPKIRQQKTMELYK 475
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 476 KNNVNPVGGCLPMVIQIPIFIALYSAFSDTID--LWNSPFLWVKDLSEPDVI-------- 525
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + P +L +L+V +Q ++ +S + DPN K L +
Sbjct: 526 --WTSPAI----PYFTQTGIGLNLLALLMVGTQIFQTRM--TSVSMDPNQK---MLMYVM 574
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 575 PVMMLYIFWNMPSGVTLYWTFQNILSIGQQ-WI 606
>gi|421722381|ref|ZP_16161644.1| inner membrane protein oxaA [Helicobacter pylori R055a]
gi|407222838|gb|EKE92635.1| inner membrane protein oxaA [Helicobacter pylori R055a]
Length = 549
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 112/223 (50%), Gaps = 35/223 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 354 WGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 413
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 414 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 459
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 460 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 498
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPM 343
PL+ F ++ P+GL LYW TNN+LS QQ+ + K +K M
Sbjct: 499 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLESKKRM 541
>gi|420417768|ref|ZP_14916863.1| inner membrane protein oxaA [Helicobacter pylori NQ4044]
gi|393030949|gb|EJB32022.1| inner membrane protein oxaA [Helicobacter pylori NQ4044]
Length = 546
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + FL
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKFL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|421110839|ref|ZP_15571328.1| 60Kd inner membrane protein [Leptospira santarosai str. JET]
gi|410803744|gb|EKS09873.1| 60Kd inner membrane protein [Leptospira santarosai str. JET]
Length = 620
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 112/213 (52%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ +S M+ L PQ+K I E++A D + Q +T LYK
Sbjct: 416 YGWSIIIFAILFKLVFYPLNQKQADSMKKMQELGPQLKTINEKFANDPKIRQQKTMELYK 475
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 476 KNNVNPVGGCLPMVIQIPIFIALYSAFSDTID--LWNSPFLWVKDLSEPDVI-------- 525
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + P +L +L+V +Q ++ +S + DPN K L +
Sbjct: 526 --WTSPAI----PYFTQTGIGLNLLALLMVGTQIFQTRM--TSVSMDPNQK---MLMYVM 574
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 575 PVMMLYIFWNMPSGVTLYWTFQNILSIGQQ-WI 606
>gi|456877055|gb|EMF92100.1| 60Kd inner membrane protein [Leptospira santarosai str. ST188]
Length = 620
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 112/213 (52%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ +S M+ L PQ+K I E++A D + Q +T LYK
Sbjct: 416 YGWSIIIFAILFKLVFYPLNQKQADSMKKMQELGPQLKTINEKFANDPKIRQQKTMELYK 475
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 476 KNNVNPVGGCLPMVIQIPIFIALYSAFSDTID--LWNSPFLWVKDLSEPDVI-------- 525
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + P +L +L+V +Q ++ +S + DPN K L +
Sbjct: 526 --WTSPAI----PYFTQTGIGLNLLALLMVGTQIFQTRM--TSVSMDPNQK---MLMYVM 574
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 575 PVMMLYIFWNMPSGVTLYWTFQNILSIGQQ-WI 606
>gi|410448149|ref|ZP_11302235.1| 60Kd inner membrane protein [Leptospira sp. Fiocruz LV3954]
gi|410018048|gb|EKO80094.1| 60Kd inner membrane protein [Leptospira sp. Fiocruz LV3954]
Length = 620
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 112/213 (52%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ +S M+ L PQ+K I E++A D + Q +T LYK
Sbjct: 416 YGWSIIIFAILFKLVFYPLNQKQADSMKKMQELGPQLKTINEKFANDPKIRQQKTMELYK 475
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 476 KNNVNPVGGCLPMVIQIPIFIALYSAFSDTID--LWNSPFLWVKDLSEPDVI-------- 525
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + P +L +L+V +Q ++ +S + DPN K L +
Sbjct: 526 --WTSPAI----PYFTQTGIGLNLLALLMVGTQIFQTRM--TSVSMDPNQK---MLMYVM 574
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 575 PVMMLYIFWNMPSGVTLYWTFQNILSIGQQ-WI 606
>gi|269103816|ref|ZP_06156513.1| OxaI/YidC membrane insertion protein [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268163714|gb|EEZ42210.1| OxaI/YidC membrane insertion protein [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 540
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 143/306 (46%), Gaps = 53/306 (17%)
Query: 26 LFTRTHFGLKPFLRGSICVAKFGLRPDPNSADGVKELLGVAERLLFTLADAAVSSSDAVT 85
L++R+ G G I V + P + D +K L V +L +A A + + V
Sbjct: 271 LYSRSSDG-----NGYIGVRMPAVTVAPGATDTLKATLWVGPKLQNEMAATAKNLNLTV- 324
Query: 86 TTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVE 145
+ WL I + + +L + + +G AI++LT IV+ A +PLTK Q
Sbjct: 325 ----DYGWLWFIASPLHKLLSFIHSIVGN------WGVAIMVLTFIVRGAMYPLTKAQYT 374
Query: 146 SSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYR 205
S MR L P+++A++ER+ D++R+ E LY+ +NPL GCLP L +P++I LY
Sbjct: 375 SMAKMRMLQPKLQAMRERFGDDRQRLSQEMMELYRKEKVNPLGGCLPILVQMPIFIALYW 434
Query: 206 ALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLV 264
AL + L FF WI L+ Y +
Sbjct: 435 ALMESVE--LRHAPFFGWIHDLSAQD------------------------------PYYI 462
Query: 265 LPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNL 324
LP+L+ ++ ++ ++ + S DP Q + F+P+M +F L PSGL LYW +N+
Sbjct: 463 LPILMGITMFM-IQKMSPSTITDP---MQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNI 518
Query: 325 LSTAQQ 330
++ QQ
Sbjct: 519 VTLIQQ 524
>gi|182680230|ref|YP_001834376.1| 60 kDa inner membrane insertion protein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|254772748|sp|B2IDV5.1|YIDC_BEII9 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|182636113|gb|ACB96887.1| 60 kDa inner membrane insertion protein [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 604
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 118/230 (51%), Gaps = 15/230 (6%)
Query: 115 LHVPYA----YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQER 170
LH Y +G AI+ +TV+VKA FPL + S M+++ PQ+ A++ERYA D+ +
Sbjct: 369 LHTIYQVVGNFGVAILCITVLVKAVFFPLANRSYLSMAKMKAIQPQMLALRERYADDKVK 428
Query: 171 IQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPT 230
Q E LYK INP+AGCLP L IPV+ LY+ L V E F WI L+ P
Sbjct: 429 QQQELMELYKREKINPVAGCLPMLIQIPVFFALYKVLF-VTIEMRQAPFFGWIRDLSAPD 487
Query: 231 TIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNM 290
N + L PF H P+ A + P+++ VS + +K+ N +P
Sbjct: 488 P----TNIFNLFGLLPFDPTHLPMI-GHFLAIGIWPLIMGVSMFFQMKM-----NPEPAD 537
Query: 291 KSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+ + +++P++ + + PSGL +YW NN LS QQ + K G K
Sbjct: 538 PVQKQMFSWMPVIFTFMLGTFPSGLVIYWTWNNTLSVLQQSLIMKRAGVK 587
>gi|188528220|ref|YP_001910907.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori Shi470]
gi|188144460|gb|ACD48877.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori Shi470]
Length = 546
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 111/215 (51%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y + +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKDEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS DP L FL
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSV-TDP---MQAKLFKFL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|420520271|ref|ZP_15018706.1| inner membrane protein oxaA [Helicobacter pylori Hp H-5b]
gi|393124667|gb|EJC25134.1| inner membrane protein oxaA [Helicobacter pylori Hp H-5b]
Length = 547
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|421099121|ref|ZP_15559781.1| 60Kd inner membrane protein [Leptospira borgpetersenii str.
200901122]
gi|410797855|gb|EKR99954.1| 60Kd inner membrane protein [Leptospira borgpetersenii str.
200901122]
Length = 623
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 110/210 (52%), Gaps = 21/210 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ S M+ L+PQ+K I E++A D + Q +T LYK
Sbjct: 419 YGWSIIIFAILFKLVFYPLNQKQANSMKKMQELSPQLKTINEKFANDSKVRQQKTMELYK 478
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 479 KNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI-------- 528
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + P +L +L+V +Q ++ +S + DPN K L +
Sbjct: 529 --WTSPAI----PYFTQTGIGLNLLALLMVGTQIFQTRM--TSVSMDPNQK---MLMYVM 577
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
P+M+ Y ++PSG++LYW N+LS QQ
Sbjct: 578 PVMMLYIFWNMPSGVTLYWTFQNVLSIGQQ 607
>gi|386746866|ref|YP_006220083.1| membrane protein insertase [Helicobacter pylori HUP-B14]
gi|384553115|gb|AFI08063.1| membrane protein insertase [Helicobacter pylori HUP-B14]
Length = 548
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 106/215 (49%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N + +N
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYNAVE----------------------LKNSEW 450
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I W+ P Y +LP+L+ S Y QS N + L
Sbjct: 451 ILWIHDLSIMDP---------YFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|284049399|ref|YP_003399738.1| YidC/Oxa1 family membrane protein insertase [Acidaminococcus
fermentans DSM 20731]
gi|283953620|gb|ADB48423.1| membrane protein insertase, YidC/Oxa1 family [Acidaminococcus
fermentans DSM 20731]
Length = 207
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 108/217 (49%), Gaps = 38/217 (17%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YG AII++T+++K PLT KQ+ S+ AM + P++K +Q RY D+ + + + LY
Sbjct: 26 SYGLAIIIMTILIKLILSPLTAKQIASTRAMSRIQPKMKELQARYKDDKVTLNQKMSELY 85
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
K G+NPLAGCLP L +P+ IG++ + + G F W+ S+A P
Sbjct: 86 KSEGVNPLAGCLPLLIQMPIMIGIFYGIRDFQYAG--PSSFLWMQSIADPD--------- 134
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDP-NMKSSQALTN 298
Y +LP+L ++ +I QS Q P + + +
Sbjct: 135 ---------------------PYYILPILSALTTFI-----QSKQTMPPSDNPQGKIMLY 168
Query: 299 FLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
F+PL IGY +L P+GL LYW N++ QQ L +
Sbjct: 169 FMPLFIGYISLKFPAGLVLYWVVMNIMQIGQQFLLDR 205
>gi|410610864|ref|ZP_11321969.1| inner membrane protein oxaA [Glaciecola psychrophila 170]
gi|410169575|dbj|GAC35858.1| inner membrane protein oxaA [Glaciecola psychrophila 170]
Length = 544
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 108/209 (51%), Gaps = 35/209 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+GFAIIL+T++VK A +PLTKKQ ES MR+L P++ A++ERY D++++Q +YK
Sbjct: 355 WGFAIILITIVVKGAMYPLTKKQYESMAKMRALKPKMDALKERYGDDKQKMQKAMMEMYK 414
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GC P L +P+++ LY L E + FWI T ++A+
Sbjct: 415 KDKVNPMGGCFPLLLQMPIFLALYWVLLESV-ELRHADFIFWI------TDLSAKD---- 463
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
PF VLPVL VS Y+ K +Q DP Q + F+
Sbjct: 464 -----PF---------------FVLPVLTGVSMYLLQK-LQPMTMTDP---MQQKIMQFM 499
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
P+ + F P+GL LYW +N+++ Q
Sbjct: 500 PVAMSLFFFIFPAGLVLYWLISNVITLVQ 528
>gi|420449514|ref|ZP_14948383.1| inner membrane protein oxaA [Helicobacter pylori Hp H-44]
gi|393062314|gb|EJB63169.1| inner membrane protein oxaA [Helicobacter pylori Hp H-44]
Length = 547
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|420489553|ref|ZP_14988145.1| inner membrane protein oxaA [Helicobacter pylori Hp P-11]
gi|420523494|ref|ZP_15021912.1| inner membrane protein oxaA [Helicobacter pylori Hp P-11b]
gi|393104974|gb|EJC05525.1| inner membrane protein oxaA [Helicobacter pylori Hp P-11]
gi|393125843|gb|EJC26295.1| inner membrane protein oxaA [Helicobacter pylori Hp P-11b]
Length = 547
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|420491549|ref|ZP_14990127.1| inner membrane protein oxaA [Helicobacter pylori Hp P-13]
gi|420525417|ref|ZP_15023822.1| inner membrane protein oxaA [Helicobacter pylori Hp P-13b]
gi|393104762|gb|EJC05316.1| inner membrane protein oxaA [Helicobacter pylori Hp P-13]
gi|393130223|gb|EJC30653.1| inner membrane protein oxaA [Helicobacter pylori Hp P-13b]
Length = 549
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 355 WGWAIILLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 414
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 415 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 460
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 461 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 499
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 500 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 534
>gi|420431183|ref|ZP_14930204.1| inner membrane protein oxaA [Helicobacter pylori Hp A-20]
gi|393044174|gb|EJB45168.1| inner membrane protein oxaA [Helicobacter pylori Hp A-20]
Length = 547
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|420416006|ref|ZP_14915119.1| inner membrane protein oxaA [Helicobacter pylori NQ4053]
gi|393031911|gb|EJB32982.1| inner membrane protein oxaA [Helicobacter pylori NQ4053]
Length = 548
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 107/215 (49%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N + ++
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYNAVE----------------------LKSSEW 450
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I W++ P Y +LP+L+ S Y QS N + L
Sbjct: 451 ILWIYDLSIMDP---------YFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|420503505|ref|ZP_15002039.1| membrane protein oxaA [Helicobacter pylori Hp P-41]
gi|393149601|gb|EJC49911.1| membrane protein oxaA [Helicobacter pylori Hp P-41]
Length = 547
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|254779961|ref|YP_003058068.1| inner membrane protein translocase component YidC [Helicobacter
pylori B38]
gi|254001874|emb|CAX30124.1| Putative inner membrane insertion protein; putative membrane
protein; putative signal peptide [Helicobacter pylori
B38]
Length = 546
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|419417260|ref|ZP_13957728.1| membrane protein insertase [Helicobacter pylori P79]
gi|384373429|gb|EIE28917.1| membrane protein insertase [Helicobacter pylori P79]
Length = 547
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 352 WGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 411
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 412 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 457
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 458 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 496
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 497 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 531
>gi|420427879|ref|ZP_14926920.1| inner membrane protein oxaA [Helicobacter pylori Hp A-9]
gi|393040065|gb|EJB41086.1| inner membrane protein oxaA [Helicobacter pylori Hp A-9]
Length = 548
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 111/223 (49%), Gaps = 35/223 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPM 343
PL+ F ++ P+GL LYW TNN+LS QQ+ + K K M
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILENKKRM 540
>gi|15646059|ref|NP_208241.1| inner membrane protein translocase component YidC [Helicobacter
pylori 26695]
gi|410024688|ref|YP_006893941.1| membrane protein insertase [Helicobacter pylori Rif1]
gi|410502453|ref|YP_006936980.1| membrane protein insertase [Helicobacter pylori Rif2]
gi|410682972|ref|YP_006935374.1| membrane protein insertase [Helicobacter pylori 26695]
gi|38502836|sp|O25989.1|YIDC_HELPY RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|2314626|gb|AAD08491.1| 60 kDa inner-membrane protein [Helicobacter pylori 26695]
gi|409894613|gb|AFV42671.1| membrane protein insertase [Helicobacter pylori 26695]
gi|409896345|gb|AFV44267.1| membrane protein insertase [Helicobacter pylori Rif1]
gi|409898004|gb|AFV45858.1| membrane protein insertase [Helicobacter pylori Rif2]
Length = 547
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 352 WGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 411
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 412 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 457
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 458 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 496
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 497 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 531
>gi|421719014|ref|ZP_16158304.1| inner membrane protein oxaA [Helicobacter pylori R038b]
gi|407218491|gb|EKE88315.1| inner membrane protein oxaA [Helicobacter pylori R038b]
Length = 546
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 107/215 (49%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDL-------------- 455
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
S Y +LP+L+ S Y QS N + L
Sbjct: 456 ----------------STMDPYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|456987467|gb|EMG22770.1| 60Kd inner membrane protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 523
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 111/213 (52%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ +S M+ L+PQ+K I E++A D + Q +T LYK
Sbjct: 318 YGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELYK 377
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 378 KNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI-------- 427
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + P +L +L+V +Q ++ S DPN K L +
Sbjct: 428 --WTSPAI----PYFTQTGIGLNLLALLMVGTQVFQTRMTSVSM--DPNQK---MLMYVM 476
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P+M+ Y ++PSG++LYW N+LS QQ W+
Sbjct: 477 PVMMLYIFWNMPSGVTLYWTFQNVLSIGQQ-WI 508
>gi|384898111|ref|YP_005773539.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori Lithuania75]
gi|317013216|gb|ADU83824.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori Lithuania75]
Length = 546
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 111/215 (51%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + ++ DP + L
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWHQSVTPNTM-TDP---MQAKIFKLL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|392375991|ref|YP_003207824.1| Inner membrane protein oxaA [Candidatus Methylomirabilis oxyfera]
gi|258593684|emb|CBE70025.1| putative Inner membrane protein oxaA [Candidatus Methylomirabilis
oxyfera]
Length = 557
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 114/217 (52%), Gaps = 22/217 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG AIIL++V+ K PLT K + S AM++L P++ AI ER + ++ Q E LYK
Sbjct: 353 YGVAIILVSVLQKIVLHPLTAKSLRSMQAMKALQPKIAAISERNKNNPQKKQQEVMGLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G+NPL GCLP L +P+++ LY ALS+ + + F WI L+ P + A
Sbjct: 413 KHGVNPLGGCLPMLIQLPIFVALYNALSSSVE--MWRAPFLWIKDLSQPDALFAFD---- 466
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W G D + + +L +L+ S + K+ S ++DP + ++ + +
Sbjct: 467 -VW-----------GLKD-YPFNLLALLMGASMFFQQKMSPPS-SSDP--QQAKLMLWMM 510
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
P M + + PSGL LYW +N+L QQ WLQK G
Sbjct: 511 PTMFTFMFWTFPSGLVLYWLVSNILQMGQQQWLQKRG 547
>gi|294010745|ref|YP_003544205.1| preprotein translocase YidC subunit [Sphingobium japonicum UT26S]
gi|292674075|dbj|BAI95593.1| preprotein translocase YidC subunit [Sphingobium japonicum UT26S]
Length = 567
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 111/218 (50%), Gaps = 23/218 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII LT +V+ FP+ ++Q S AMR++ P++KA+QE+Y D+ R+Q E LYK
Sbjct: 359 FGVAIICLTFVVRGLMFPVAQRQFASMAAMRAVQPKMKALQEKYKDDKPRLQQEMMELYK 418
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPLAGCLP IP++ LY+ L + E WI L+ P +
Sbjct: 419 REKVNPLAGCLPIFIQIPIFFALYKVL-QLTIEMRHQPFVLWIKDLSAPDPLH------- 470
Query: 241 ISWLFPFVDGHPPLGWSDTFAYL---VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALT 297
I LF + PP A+L VL +LL +S Y K+ + DP Q +
Sbjct: 471 IVNLFGLLPFTPP-------AFLGIGVLALLLGISMYFQFKL--NPAQMDP---MQQQVF 518
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+P M+ + +GL +YW TNN LS QQ WL K
Sbjct: 519 AIMPWMMMFIMAPFAAGLLVYWITNNCLSMLQQWWLYK 556
>gi|427410089|ref|ZP_18900291.1| membrane protein insertase, YidC/Oxa1 family domain [Sphingobium
yanoikuyae ATCC 51230]
gi|425712222|gb|EKU75237.1| membrane protein insertase, YidC/Oxa1 family domain [Sphingobium
yanoikuyae ATCC 51230]
Length = 568
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 111/215 (51%), Gaps = 17/215 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII LT V+A FP+ ++Q S AMR++ P++KA+QE+Y D++++Q + LYK
Sbjct: 359 FGVAIICLTFCVRALMFPVAQRQFASMAAMRAVQPKMKALQEKYKDDKQQLQQKMMELYK 418
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPLAGCLP IP++ LY+ L + E WI L+ P +
Sbjct: 419 QEKVNPLAGCLPIFIQIPIFFALYKVL-QLTIEMRHQPFVLWIKDLSAPDPLHILN---- 473
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
LF + PP A VL +LL +S ++ K+ + DP Q + +
Sbjct: 474 ---LFGLLPFTPP----SFLAIGVLALLLGISMWLQFKL--NPAQMDP---MQQQVFAIM 521
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P M+ + +GL +YW TNN LS AQQ WL K
Sbjct: 522 PWMMMFIMAPFAAGLLVYWITNNCLSMAQQWWLYK 556
>gi|420469713|ref|ZP_14968424.1| inner membrane protein oxaA [Helicobacter pylori Hp H-11]
gi|393086759|gb|EJB87429.1| inner membrane protein oxaA [Helicobacter pylori Hp H-11]
Length = 548
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|390166045|ref|ZP_10218315.1| membrane protein insertase [Sphingobium indicum B90A]
gi|389591109|gb|EIM69087.1| membrane protein insertase [Sphingobium indicum B90A]
Length = 567
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 111/218 (50%), Gaps = 23/218 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII LT +V+ FP+ ++Q S AMR++ P++KA+QE+Y D+ R+Q E LYK
Sbjct: 359 FGVAIICLTFVVRGLMFPVAQRQFASMAAMRAVQPKMKALQEKYKDDKPRLQQEMMELYK 418
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPLAGCLP IP++ LY+ L + E WI L+ P +
Sbjct: 419 REKVNPLAGCLPIFIQIPIFFALYKVL-QLTIEMRHQPFVLWIKDLSAPDPLH------- 470
Query: 241 ISWLFPFVDGHPPLGWSDTFAYL---VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALT 297
I LF + PP A+L VL +LL +S Y K+ + DP Q +
Sbjct: 471 IVNLFGLLPFTPP-------AFLGIGVLALLLGISMYFQFKL--NPAQMDP---MQQQVF 518
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+P M+ + +GL +YW TNN LS QQ WL K
Sbjct: 519 AIMPWMMMFIMAPFAAGLLVYWITNNCLSMLQQWWLYK 556
>gi|420464463|ref|ZP_14963234.1| inner membrane protein oxaA [Helicobacter pylori Hp H-4]
gi|393077692|gb|EJB78439.1| inner membrane protein oxaA [Helicobacter pylori Hp H-4]
Length = 545
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|420447735|ref|ZP_14946621.1| inner membrane protein oxaA [Helicobacter pylori Hp H-43]
gi|393061796|gb|EJB62656.1| inner membrane protein oxaA [Helicobacter pylori Hp H-43]
Length = 548
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|208435316|ref|YP_002266982.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori G27]
gi|208433245|gb|ACI28116.1| 60 kDa inner-membrane protein [Helicobacter pylori G27]
Length = 548
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 111/223 (49%), Gaps = 35/223 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPM 343
PL+ F ++ P+GL LYW TNN+LS QQ+ + K K M
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILENKKRM 540
>gi|193216427|ref|YP_001997626.1| 60 kDa inner membrane insertion protein [Chloroherpeton thalassium
ATCC 35110]
gi|254772769|sp|B3QYV6.1|YIDC_CHLT3 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|193089904|gb|ACF15179.1| 60 kDa inner membrane insertion protein [Chloroherpeton thalassium
ATCC 35110]
Length = 586
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 114/220 (51%), Gaps = 23/220 (10%)
Query: 116 HVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLET 175
HV +YG IIL + +K T+PLT +S M +L PQ+KAIQE+Y + E++Q E
Sbjct: 366 HVD-SYGVIIILFALFIKLVTYPLTMASTKSMKKMAALQPQLKAIQEQYKDNPEKLQAEI 424
Query: 176 ARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAAR 235
+ +Y+ AG+NPL GCLPT+ +P+ ++ + L EGF W L+ P +I
Sbjct: 425 SGIYREAGVNPLGGCLPTVIQMPLLFAMFYVFRSSIQ--LRQEGFLWSNDLSVPDSIL-- 480
Query: 236 QNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
+ + P H V+P+L+ V+ + K+ S+Q ND MK
Sbjct: 481 ----DLPFSIPLYGDHVS----------VIPILMGVAVFFQQKLTPSTQTND-QMKFMMY 525
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
L P M+ F ++PSGL LY+ N+ S AQQ ++ +
Sbjct: 526 L---FPGMMLIFFNNMPSGLGLYYLMFNVFSIAQQFYINQ 562
>gi|420450992|ref|ZP_14949846.1| inner membrane protein oxaA [Helicobacter pylori Hp H-45]
gi|393064924|gb|EJB65754.1| inner membrane protein oxaA [Helicobacter pylori Hp H-45]
Length = 544
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 111/223 (49%), Gaps = 35/223 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 349 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 408
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 409 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 454
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 455 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 493
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPM 343
PL+ F ++ P+GL LYW TNN+LS QQ+ + K K M
Sbjct: 494 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILENKKRM 536
>gi|386756471|ref|YP_006229688.1| membrane protein insertase [Helicobacter pylori PeCan18]
gi|384562729|gb|AFI03195.1| membrane protein insertase [Helicobacter pylori PeCan18]
Length = 546
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|385216604|ref|YP_005776561.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori F32]
gi|317181133|dbj|BAJ58919.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori F32]
Length = 546
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 111/215 (51%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ +AP++K +QE+Y + +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKDEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + SS DP + FL
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWHQSVTPSSV-TDP---MQAKIFKFL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|420459234|ref|ZP_14958036.1| inner membrane protein oxaA [Helicobacter pylori Hp A-26]
gi|393071924|gb|EJB72704.1| inner membrane protein oxaA [Helicobacter pylori Hp A-26]
Length = 548
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|419419126|ref|ZP_13959389.1| membrane protein insertase [Helicobacter pylori NCTC 11637 = CCUG
17874]
gi|384372948|gb|EIE28502.1| membrane protein insertase [Helicobacter pylori NCTC 11637 = CCUG
17874]
Length = 548
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|383750477|ref|YP_005425580.1| membrane protein insertase [Helicobacter pylori ELS37]
gi|380875223|gb|AFF21004.1| membrane protein insertase [Helicobacter pylori ELS37]
Length = 548
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|308183546|ref|YP_003927673.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori PeCan4]
gi|308065731|gb|ADO07623.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori PeCan4]
Length = 548
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|381200554|ref|ZP_09907691.1| membrane protein insertase [Sphingobium yanoikuyae XLDN2-5]
Length = 568
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 111/215 (51%), Gaps = 17/215 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII LT V+A FP+ ++Q S AMR++ P++KA+QE+Y D++++Q + LYK
Sbjct: 359 FGVAIICLTFCVRALMFPVAQRQFASMAAMRAVQPKMKALQEKYKDDKQQLQQKMMELYK 418
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPLAGCLP IP++ LY+ L + E WI L+ P +
Sbjct: 419 QEKVNPLAGCLPIFIQIPIFFALYKVL-QLTIEMRHQPFVLWIKDLSAPDPLHILN---- 473
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
LF + PP A VL +LL +S ++ K+ + DP Q + +
Sbjct: 474 ---LFGLLPFTPP----SFLAIGVLALLLGISMWLQFKL--NPAQMDP---MQQQVFAIM 521
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P M+ + +GL +YW TNN LS AQQ WL K
Sbjct: 522 PWMMMFIMAPFAAGLLVYWITNNCLSMAQQWWLYK 556
>gi|207091817|ref|ZP_03239604.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori HPKX_438_AG0C1]
Length = 546
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|398383127|ref|ZP_10541201.1| membrane protein insertase, YidC/Oxa1 family, N-terminal
domain-containing protein [Sphingobium sp. AP49]
gi|397725294|gb|EJK85747.1| membrane protein insertase, YidC/Oxa1 family, N-terminal
domain-containing protein [Sphingobium sp. AP49]
Length = 568
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 111/215 (51%), Gaps = 17/215 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII LT V+A FP+ ++Q S AMR++ P++KA+QE+Y D++++Q + LYK
Sbjct: 359 FGVAIICLTFCVRALMFPVAQRQFASMAAMRAVQPKLKALQEKYKDDKQQLQQKMMELYK 418
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPLAGCLP IP++ LY+ L + E WI L+ P +
Sbjct: 419 QEKVNPLAGCLPIFLQIPIFFALYKVL-QLTIEMRHQPFVLWIKDLSAPDPLHILN---- 473
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
LF + PP A VL +LL +S ++ K+ + DP Q + +
Sbjct: 474 ---LFGLLPFTPP----SFLAIGVLALLLGISMWLQFKL--NPAQMDP---MQQQVFAIM 521
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P M+ + +GL +YW TNN LS AQQ WL K
Sbjct: 522 PWMMMFIMAPFAAGLLVYWITNNCLSMAQQWWLYK 556
>gi|420505066|ref|ZP_15003590.1| inner membrane protein oxaA [Helicobacter pylori Hp P-62]
gi|393154212|gb|EJC54497.1| inner membrane protein oxaA [Helicobacter pylori Hp P-62]
Length = 550
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 355 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 414
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 415 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 460
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 461 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 499
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 500 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 534
>gi|420455941|ref|ZP_14954765.1| inner membrane protein oxaA [Helicobacter pylori Hp A-14]
gi|393071061|gb|EJB71848.1| inner membrane protein oxaA [Helicobacter pylori Hp A-14]
Length = 548
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHIMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|456860899|gb|EMF79609.1| 60Kd inner membrane protein [Leptospira weilii serovar Topaz str.
LT2116]
Length = 498
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 109/210 (51%), Gaps = 21/210 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG++II+ ++ K +PL +KQ +S M+ L+PQ+K I E++A D + Q +T LYK
Sbjct: 294 YGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKVRQQKTMELYK 353
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IP++I LY A S+ D L F W+ L+ P I
Sbjct: 354 KNNVNPVGGCLPMVIQIPIFIALYTAFSDTID--LWNSPFLWVKDLSEPDVI-------- 403
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W P + P +L +L+V +Q ++ S DPN K L +
Sbjct: 404 --WTSPAI----PYFTQTGIGLNLLALLMVGTQIFQTRMTSVSM--DPNQK---MLMYVM 452
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
P+M+ Y ++PSG++LYW N+LS QQ
Sbjct: 453 PVMMLYIFWNMPSGVTLYWTFQNVLSIGQQ 482
>gi|420467761|ref|ZP_14966510.1| inner membrane protein oxaA [Helicobacter pylori Hp H-9]
gi|393083021|gb|EJB83735.1| inner membrane protein oxaA [Helicobacter pylori Hp H-9]
Length = 546
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 111/223 (49%), Gaps = 35/223 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPM 343
PL+ F ++ P+GL LYW TNN+LS QQ+ + K K M
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILENKKRM 538
>gi|420444468|ref|ZP_14943389.1| membrane protein oxaA [Helicobacter pylori Hp H-41]
gi|393058448|gb|EJB59339.1| membrane protein oxaA [Helicobacter pylori Hp H-41]
Length = 547
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|420488149|ref|ZP_14986751.1| inner membrane protein oxaA [Helicobacter pylori Hp P-8]
gi|420522023|ref|ZP_15020451.1| inner membrane protein oxaA [Helicobacter pylori Hp P-8b]
gi|393100586|gb|EJC01161.1| inner membrane protein oxaA [Helicobacter pylori Hp P-8]
gi|393125614|gb|EJC26068.1| inner membrane protein oxaA [Helicobacter pylori Hp P-8b]
Length = 547
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 105/215 (48%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N + +N
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYNAVE----------------------LKNSEW 450
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I W+ P Y +LP+L+ S Y QS N + L
Sbjct: 451 ILWIHDLSIMDP---------YFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|404494833|ref|YP_006718939.1| preprotein translocase subunit YidC [Pelobacter carbinolicus DSM
2380]
gi|77546816|gb|ABA90378.1| preprotein translocase subunit YidC [Pelobacter carbinolicus DSM
2380]
Length = 542
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 111/220 (50%), Gaps = 40/220 (18%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG AIILLTV +K +PLT K +S M+ L P+++ ++E+Y D+ER+ E LY+
Sbjct: 355 YGVAIILLTVFIKVLFWPLTHKSYKSMRDMQKLQPEMQRLREKYKKDKERMNREIMELYR 414
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF-FWIPSLAGPTTIAARQNGS 239
+NP+ GCLP A IPV+ LY+ L + L E F FWI LA
Sbjct: 415 KNRVNPMGGCLPMFAQIPVFFALYKVL--LGSIALRHEPFIFWIQDLAAKD--------- 463
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQA-LTN 298
Y + P+++ V+ + K+ ++ M S QA +
Sbjct: 464 ---------------------PYYITPLIMGVTMFFQQKMSPTT------MDSQQAKIML 496
Query: 299 FLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGG 338
F+P++ + L+ PSGL +YW NN+L+ AQQ ++ + GG
Sbjct: 497 FMPVIFTFMFLNFPSGLVIYWLVNNVLTIAQQWFINREGG 536
>gi|350572064|ref|ZP_08940373.1| YidC/Oxa1 family membrane protein insertase [Neisseria wadsworthii
9715]
gi|349790652|gb|EGZ44555.1| YidC/Oxa1 family membrane protein insertase [Neisseria wadsworthii
9715]
Length = 544
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 109/219 (49%), Gaps = 44/219 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLTVIVKAA +PLT S MR++AP+++A++++Y D+ +Q ++Y+
Sbjct: 352 WGWAIVLLTVIVKAALYPLTNASYRSMAKMRAVAPKLEALKQKYGDDRMALQQAMMQMYR 411
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY A+ ++ RQ
Sbjct: 412 DEKINPLGGCLPMLLQIPVFIGLYWAVF---------------------ASVELRQ---- 446
Query: 241 ISWLFPFVDGHPPLGW----SDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P +GW S T Y +LP+L+ + + Q++ N P +
Sbjct: 447 ----------APWIGWITDLSRTDPYFILPLLMAATMW-----FQTTLNPPPTDPMQAKM 491
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+P++ PSGL LYW NN+LS AQQ ++ K
Sbjct: 492 MKMMPIIFSVMFFFFPSGLVLYWVVNNILSIAQQWYINK 530
>gi|157415220|ref|YP_001482476.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 81116]
gi|384441579|ref|YP_005657882.1| Inner membrane protein oxaA [Campylobacter jejuni subsp. jejuni M1]
gi|415744757|ref|ZP_11474704.1| 60Kd inner membrane family protein [Campylobacter jejuni subsp.
jejuni 327]
gi|419636028|ref|ZP_14168311.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 55037]
gi|157386184|gb|ABV52499.1| 60 kDa inner-membrane protein [Campylobacter jejuni subsp. jejuni
81116]
gi|307747862|gb|ADN91132.1| Inner membrane protein oxaA [Campylobacter jejuni subsp. jejuni M1]
gi|315932545|gb|EFV11478.1| 60Kd inner membrane family protein [Campylobacter jejuni subsp.
jejuni 327]
gi|380610973|gb|EIB30539.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 55037]
Length = 530
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 121/253 (47%), Gaps = 41/253 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + +G+AI+++T+IV+ FPLT K + S ++
Sbjct: 314 WFTFIAKPMFEFLNFLHQYIGN------WGWAIVVMTLIVRIILFPLTYKSMISMNKLKD 367
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K I+ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 368 LAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 426
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L S Y +LP+L+ V+
Sbjct: 427 ELKAAPWAFWIHDL------------------------------SVMDPYFILPILMGVT 456
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ ++I DP + FLP++ +F ++ P+GL+LYWF NNL S QQ
Sbjct: 457 MFLQ-QLITPMTIQDP---MQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQWV 512
Query: 333 LQKFGGAKDPMKQ 345
+ K + KQ
Sbjct: 513 INKIFAKEHHKKQ 525
>gi|392427888|ref|YP_006468882.1| preprotein translocase subunit YidC [Desulfosporosinus acidiphilus
SJ4]
gi|391357851|gb|AFM43550.1| preprotein translocase subunit YidC [Desulfosporosinus acidiphilus
SJ4]
Length = 224
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 124/242 (51%), Gaps = 28/242 (11%)
Query: 94 LSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSL 153
+S I M +L + + S L +P YG AIILLT+++K +PLT KQ+ S L
Sbjct: 1 MSIIVQWMTYLLNIFYNLSSALGLP-NYGVAIILLTILIKTIIYPLTYKQMASMRKTVDL 59
Query: 154 APQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADE 213
P++KAIQ ++ D+E+ E LYK +NP+ GCLP + +P++ GLY L N
Sbjct: 60 QPKIKAIQAKHKNDKEKANAEIMELYKEHQVNPMGGCLPIVIQLPIFWGLYSTLRNFP-- 117
Query: 214 GLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQ 273
G + AA W F D G++ ++ +++LP+ +
Sbjct: 118 -------------YGASANAAH-------WFLGF-DLTKIYGFTLSY-HIILPLFAAATT 155
Query: 274 YISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
++ K+ + ++DP K+ + +PL Y + +VPSGL+LYW T N +S QQ+++
Sbjct: 156 FLQTKVTNPNASSDPTQKT---MLYIMPLFFAYISATVPSGLALYWVTMNCVSILQQLYI 212
Query: 334 QK 335
+
Sbjct: 213 NR 214
>gi|322379151|ref|ZP_08053547.1| 60 kDa inner-membrane protein [Helicobacter suis HS1]
gi|322381048|ref|ZP_08055076.1| inner membrane protein translocase component YidC [Helicobacter
suis HS5]
gi|321146518|gb|EFX41390.1| inner membrane protein translocase component YidC [Helicobacter
suis HS5]
gi|321148414|gb|EFX42918.1| 60 kDa inner-membrane protein [Helicobacter suis HS1]
Length = 547
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 112/214 (52%), Gaps = 38/214 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y D +++Q+ +LYK
Sbjct: 355 WGWAIILLTLIVRIILYPLSYKGMVSMQKIKDLAPKMKELQEKYKSDPQKLQMHMMQLYK 414
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF-FWIPSLAGPTTIAARQNGS 239
G NPL GCLP L IPV+ +YR L N + L + G+ WI L+
Sbjct: 415 KHGANPLGGCLPILLQIPVFFAIYRVLYNAVE--LKSAGWMLWIHDLS------------ 460
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
+D Y +LP+L+ +S Y + + + S DP + +
Sbjct: 461 -------LMD-----------PYFILPLLMGISMY-AQQALTPSTITDP---TQAKIFKM 498
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
LPL F ++ P+GL LYW TNN+ S QQ WL
Sbjct: 499 LPLFFTIFLITFPAGLVLYWTTNNIFSIIQQ-WL 531
>gi|421712538|ref|ZP_16151872.1| inner membrane protein oxaA [Helicobacter pylori R030b]
gi|407209811|gb|EKE79699.1| inner membrane protein oxaA [Helicobacter pylori R030b]
Length = 545
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|420414300|ref|ZP_14913420.1| inner membrane protein oxaA [Helicobacter pylori NQ4099]
gi|393026634|gb|EJB27731.1| inner membrane protein oxaA [Helicobacter pylori NQ4099]
Length = 548
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D +Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------SYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|393721374|ref|ZP_10341301.1| membrane protein insertase [Sphingomonas echinoides ATCC 14820]
Length = 585
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 119/224 (53%), Gaps = 20/224 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLTV ++ FP+ ++Q S AM+++ P++KAIQE+Y D+ R Q E LYK
Sbjct: 376 FGVAIILLTVTIRTLIFPVAQRQFASMAAMKAIQPKMKAIQEKYKDDKARAQQEVMALYK 435
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGS 239
+NPLAGCLPTL IP+ LY+ L + + + F WI L+ P + +
Sbjct: 436 AEKVNPLAGCLPTLIQIPIMYSLYKVLLLTIE--MRHQPFVGWIHDLSAP-------DPA 486
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
I +F ++ H P A V+PVLL VS + K+ N P ++ + +
Sbjct: 487 TILNMFGYLPYHLP----SFLAIGVVPVLLGVSMFFQFKL-----NPAPMDEAQKQVFAI 537
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ-KFGGAKDP 342
+P M+ + GL +YW T+NL + AQQ L + G K+P
Sbjct: 538 MPWMLMFVMAPFAVGLQVYWITSNLWTVAQQRLLYARHPGLKEP 581
>gi|420441124|ref|ZP_14940074.1| inner membrane protein oxaA [Helicobacter pylori Hp H-30]
gi|393054265|gb|EJB55194.1| inner membrane protein oxaA [Helicobacter pylori Hp H-30]
Length = 547
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|334346494|ref|YP_004555046.1| membrane protein OxaA [Sphingobium chlorophenolicum L-1]
gi|334103116|gb|AEG50540.1| Membrane protein oxaA [Sphingobium chlorophenolicum L-1]
Length = 567
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 110/218 (50%), Gaps = 23/218 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII LT +V+ FP+ ++Q S AMR++ P++KA+QE+Y D+ ++Q E LYK
Sbjct: 359 FGVAIICLTFVVRGLMFPVAQRQFASMAAMRAVQPKMKALQEKYKDDKPKLQQEMMELYK 418
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPLAGCLP IP++ LY+ L + E WI L+ P +
Sbjct: 419 REKVNPLAGCLPIFIQIPIFFALYKVL-QLTIEMRHQPFVLWIKDLSAPDPLHILN---- 473
Query: 241 ISWLFPFVDGHPPLGWSDTFAYL---VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALT 297
LF + PP A+L VL +LL +S Y K+ + DP Q +
Sbjct: 474 ---LFGLLPFTPP-------AFLGIGVLALLLGISMYFQFKL--NPAQMDP---MQQQVF 518
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+P M+ + +GL +YW TNN LS QQ WL K
Sbjct: 519 AIMPWMMMFIMAPFAAGLLVYWITNNCLSMLQQWWLYK 556
>gi|420424435|ref|ZP_14923503.1| inner membrane protein oxaA [Helicobacter pylori Hp A-4]
gi|393039723|gb|EJB40750.1| inner membrane protein oxaA [Helicobacter pylori Hp A-4]
Length = 547
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|420439470|ref|ZP_14938433.1| inner membrane protein oxaA [Helicobacter pylori Hp H-29]
gi|393053789|gb|EJB54731.1| inner membrane protein oxaA [Helicobacter pylori Hp H-29]
Length = 547
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 105/215 (48%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N + +N
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYNAVE----------------------LKNSEW 450
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+ W+ P Y +LP+L+ S Y QS N + L
Sbjct: 451 VLWIHDLSIMDP---------YFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|150389948|ref|YP_001319997.1| 60 kDa inner membrane insertion protein [Alkaliphilus
metalliredigens QYMF]
gi|149949810|gb|ABR48338.1| 60 kDa inner membrane insertion protein [Alkaliphilus
metalliredigens QYMF]
Length = 217
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 122/247 (49%), Gaps = 45/247 (18%)
Query: 94 LSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSL 153
++ +T + +LK++ D + YG AII+ TV+VK A PLT KQ +S M+ +
Sbjct: 1 MNFLTQPLGALLKIIFDVIGN------YGIAIIVFTVLVKLAMVPLTMKQTKSMKKMQEI 54
Query: 154 APQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADE 213
P +K +QE++ D+E++ ++ LYK ++P GCLP L P+ IGL+ L D
Sbjct: 55 QPMIKELQEQHKDDKEQMNIKVMELYKEYNVSPFGGCLPLLIQFPIIIGLFTVLREPMDY 114
Query: 214 GLLTE----GFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLL 269
G E GF WIP+LA + P W +LP+L
Sbjct: 115 GFTLEVIQAGFLWIPNLA---------------------EADP---W-------ILPLLA 143
Query: 270 VVSQYI-SVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTA 328
++ Y+ S+ + + DP + + F P+MI ++ S P+GL+LYW +NL
Sbjct: 144 GLTTYLSSISMAATGNKKDP---TQVIMKYFFPIMIFWWGRSFPAGLTLYWVISNLFQAG 200
Query: 329 QQVWLQK 335
QQ+ + K
Sbjct: 201 QQIVINK 207
>gi|420476357|ref|ZP_14975024.1| inner membrane protein oxaA [Helicobacter pylori Hp H-21]
gi|393090264|gb|EJB90898.1| inner membrane protein oxaA [Helicobacter pylori Hp H-21]
Length = 547
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|420496689|ref|ZP_14995250.1| inner membrane protein oxaA [Helicobacter pylori Hp P-25]
gi|420528719|ref|ZP_15027109.1| inner membrane protein oxaA [Helicobacter pylori Hp P-25c]
gi|420528880|ref|ZP_15027268.1| inner membrane protein oxaA [Helicobacter pylori Hp P-25d]
gi|393114386|gb|EJC14901.1| inner membrane protein oxaA [Helicobacter pylori Hp P-25]
gi|393132318|gb|EJC32739.1| inner membrane protein oxaA [Helicobacter pylori Hp P-25c]
gi|393137994|gb|EJC38376.1| inner membrane protein oxaA [Helicobacter pylori Hp P-25d]
Length = 547
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|420432993|ref|ZP_14932002.1| membrane protein oxaA [Helicobacter pylori Hp H-24]
gi|420508492|ref|ZP_15006998.1| inner membrane protein oxaA [Helicobacter pylori Hp H-24b]
gi|420510092|ref|ZP_15008588.1| inner membrane protein oxaA [Helicobacter pylori Hp H-24c]
gi|420532185|ref|ZP_15030548.1| membrane protein oxaA [Helicobacter pylori Hp M1]
gi|420535474|ref|ZP_15033819.1| membrane protein oxaA [Helicobacter pylori Hp M2]
gi|420535557|ref|ZP_15033899.1| membrane protein oxaA [Helicobacter pylori Hp M3]
gi|420537259|ref|ZP_15035589.1| membrane protein oxaA [Helicobacter pylori Hp M4]
gi|420538989|ref|ZP_15037308.1| membrane protein oxaA [Helicobacter pylori Hp M5]
gi|420540747|ref|ZP_15039055.1| membrane protein oxaA [Helicobacter pylori Hp M6]
gi|420543816|ref|ZP_15042105.1| membrane protein oxaA [Helicobacter pylori Hp M9]
gi|393051861|gb|EJB52811.1| membrane protein oxaA [Helicobacter pylori Hp H-24]
gi|393115284|gb|EJC15795.1| inner membrane protein oxaA [Helicobacter pylori Hp H-24b]
gi|393116619|gb|EJC17124.1| inner membrane protein oxaA [Helicobacter pylori Hp H-24c]
gi|393139759|gb|EJC40133.1| membrane protein oxaA [Helicobacter pylori Hp M2]
gi|393139816|gb|EJC40189.1| membrane protein oxaA [Helicobacter pylori Hp M1]
gi|393143205|gb|EJC43549.1| membrane protein oxaA [Helicobacter pylori Hp M3]
gi|393144814|gb|EJC45145.1| membrane protein oxaA [Helicobacter pylori Hp M4]
gi|393146674|gb|EJC46999.1| membrane protein oxaA [Helicobacter pylori Hp M5]
gi|393147367|gb|EJC47691.1| membrane protein oxaA [Helicobacter pylori Hp M6]
gi|393158813|gb|EJC59069.1| membrane protein oxaA [Helicobacter pylori Hp M9]
Length = 544
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|420429525|ref|ZP_14928558.1| inner membrane protein oxaA [Helicobacter pylori Hp A-17]
gi|393044855|gb|EJB45847.1| inner membrane protein oxaA [Helicobacter pylori Hp A-17]
Length = 548
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|420425984|ref|ZP_14925044.1| inner membrane protein oxaA [Helicobacter pylori Hp A-5]
gi|393040882|gb|EJB41900.1| inner membrane protein oxaA [Helicobacter pylori Hp A-5]
Length = 547
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|338811366|ref|ZP_08623584.1| hypothetical protein ALO_04753 [Acetonema longum DSM 6540]
gi|337276656|gb|EGO65075.1| hypothetical protein ALO_04753 [Acetonema longum DSM 6540]
Length = 222
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 123/239 (51%), Gaps = 35/239 (14%)
Query: 97 ITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQ 156
++++M++ L + + +P +YG AIILLT+ +K +PLT KQV+S AM L P+
Sbjct: 6 LSDIMKSALTFFYNLTVSAGIP-SYGLAIILLTIAIKMILYPLTVKQVKSMKAMSELQPK 64
Query: 157 VKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLL 216
+K +QE+Y ++E++ E LY+ AG+NPLAGCLP L +P I ++ A+ G
Sbjct: 65 MKELQEKYKDNKEKLGKEIGELYQKAGVNPLAGCLPLLVQMPFLIAIFFAIKEYNYVG-- 122
Query: 217 TEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYIS 276
F W+ ++ A+ N S PL +LPVL ++ +
Sbjct: 123 DSSFLWLQNM-------AQDNPSD------------PL--------YILPVLSALTTW-- 153
Query: 277 VKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+Q Q + ++ + +P+ IGY ++ P+GL +YW N++ QQ W+ +
Sbjct: 154 ---VQQKQTTVDSSAQNKMMMIMMPVFIGYITITFPAGLGIYWVVGNIVQIIQQWWMYR 209
>gi|419589526|ref|ZP_14125317.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 317/04]
gi|380567166|gb|EIA89705.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 317/04]
Length = 531
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 124/253 (49%), Gaps = 41/253 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + + +G+AI+++ +I++ FPLT K + S ++
Sbjct: 318 WFTFIAKPMFEFLNFLHNHIGN------WGWAIVIMVLIIRIILFPLTYKSMISMNKLKD 371
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K ++ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 372 LAPKMKELRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 430
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L S Y +LP+L+ V+
Sbjct: 431 ELKAAPWAFWIHDL------------------------------SVMDPYFILPILMGVT 460
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
+I ++I DP M++ + FLP++ +F ++ P+GL+LYWF NNL S QQ
Sbjct: 461 MFIQ-QLITPMTIQDP-MQAK--IMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQWV 516
Query: 333 LQKFGGAKDPMKQ 345
+ K + KQ
Sbjct: 517 INKMFAKEHHKKQ 529
>gi|424589279|ref|ZP_18028743.1| inner membrane protein oxaA [Vibrio cholerae CP1037(10)]
gi|408037997|gb|EKG74357.1| inner membrane protein oxaA [Vibrio cholerae CP1037(10)]
Length = 541
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 123/261 (47%), Gaps = 49/261 (18%)
Query: 82 DAVTTTKQNSD------WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAA 135
D + T N D WL I + +L V+++ + +G AII LT IV+ A
Sbjct: 313 DQMAATAPNLDLVVDYGWLWFIAKPLHWLLSVIQNFVGN------WGVAIICLTFIVRGA 366
Query: 136 TFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLA 195
+PLTK Q S MR L P+++A++ER D++R+ E LYK +NPL GCLP L
Sbjct: 367 MYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILL 426
Query: 196 TIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPL 254
+P++I LY AL + L FF WI L+
Sbjct: 427 QMPIFIALYWALMESVE--LRHSPFFGWIHDLSAQD------------------------ 460
Query: 255 GWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSG 314
Y +LP+L+ S ++ ++ + + DP Q + F+P+M +F L PSG
Sbjct: 461 ------PYYILPLLMGASMFV-IQKMSPTTITDP---MQQKIMTFMPVMFTFFFLWFPSG 510
Query: 315 LSLYWFTNNLLSTAQQVWLQK 335
L LYW +N+++ QQ + K
Sbjct: 511 LVLYWLVSNIVTLIQQTLIYK 531
>gi|421352773|ref|ZP_15803113.1| inner membrane protein oxaA [Vibrio cholerae HE-45]
gi|395956921|gb|EJH67510.1| inner membrane protein oxaA [Vibrio cholerae HE-45]
Length = 541
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 123/261 (47%), Gaps = 49/261 (18%)
Query: 82 DAVTTTKQNSD------WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAA 135
D + T N D WL I + +L V+++ + +G AII LT IV+ A
Sbjct: 313 DQMAATAPNLDLVVDYGWLWFIAKPLHWLLSVIQNFVGN------WGVAIICLTFIVRGA 366
Query: 136 TFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLA 195
+PLTK Q S MR L P+++A++ER D++R+ E LYK +NPL GCLP L
Sbjct: 367 MYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILL 426
Query: 196 TIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPL 254
+P++I LY AL + L FF WI L+
Sbjct: 427 QMPIFIALYWALMESVE--LRHSPFFGWIHDLSAQD------------------------ 460
Query: 255 GWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSG 314
Y +LP+L+ S ++ ++ + + DP Q + F+P+M +F L PSG
Sbjct: 461 ------PYYILPLLMGASMFV-IQKMSPTTITDP---MQQKIMTFMPVMFTFFFLWFPSG 510
Query: 315 LSLYWFTNNLLSTAQQVWLQK 335
L LYW +N+++ QQ + K
Sbjct: 511 LVLYWLVSNIVTLIQQTLIYK 531
>gi|420466190|ref|ZP_14964950.1| inner membrane protein oxaA [Helicobacter pylori Hp H-6]
gi|393078765|gb|EJB79503.1| inner membrane protein oxaA [Helicobacter pylori Hp H-6]
Length = 547
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|419834945|ref|ZP_14358395.1| inner membrane protein oxaA [Vibrio cholerae HC-46B1]
gi|422908520|ref|ZP_16943212.1| inner membrane protein oxaA [Vibrio cholerae HE-09]
gi|423733284|ref|ZP_17706523.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-41B1]
gi|424007585|ref|ZP_17750547.1| inner membrane protein oxaA [Vibrio cholerae HC-44C1]
gi|341640450|gb|EGS65039.1| inner membrane protein oxaA [Vibrio cholerae HE-09]
gi|408632750|gb|EKL05185.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-41B1]
gi|408859673|gb|EKL99328.1| inner membrane protein oxaA [Vibrio cholerae HC-46B1]
gi|408868335|gb|EKM07671.1| inner membrane protein oxaA [Vibrio cholerae HC-44C1]
Length = 541
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 123/261 (47%), Gaps = 49/261 (18%)
Query: 82 DAVTTTKQNSD------WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAA 135
D + T N D WL I + +L V+++ + +G AII LT IV+ A
Sbjct: 313 DQMAATAPNLDLVVDYGWLWFIAKPLHWLLSVIQNFVGN------WGVAIICLTFIVRGA 366
Query: 136 TFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLA 195
+PLTK Q S MR L P+++A++ER D++R+ E LYK +NPL GCLP L
Sbjct: 367 MYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILL 426
Query: 196 TIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPL 254
+P++I LY AL + L FF WI L+
Sbjct: 427 QMPIFIALYWALMESVE--LRHSPFFGWIHDLSAQD------------------------ 460
Query: 255 GWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSG 314
Y +LP+L+ S ++ ++ + + DP Q + F+P+M +F L PSG
Sbjct: 461 ------PYYILPLLMGASMFV-IQKMSPTTITDP---MQQKIMTFMPVMFTFFFLWFPSG 510
Query: 315 LSLYWFTNNLLSTAQQVWLQK 335
L LYW +N+++ QQ + K
Sbjct: 511 LVLYWLVSNIVTLIQQTLIYK 531
>gi|420476479|ref|ZP_14975142.1| inner membrane protein oxaA [Helicobacter pylori Hp H-23]
gi|393094904|gb|EJB95509.1| inner membrane protein oxaA [Helicobacter pylori Hp H-23]
Length = 549
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 105/215 (48%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 355 WGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 414
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N + +N
Sbjct: 415 KHGANPLGGCLPLILQIPVFFAIYRVLYNAVE----------------------LKNSEW 452
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+ W+ P Y +LP+L+ S Y QS N + L
Sbjct: 453 VLWIHDLSIMDP---------YFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 499
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 500 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 534
>gi|420446173|ref|ZP_14945074.1| inner membrane protein oxaA [Helicobacter pylori Hp H-42]
gi|393059362|gb|EJB60242.1| inner membrane protein oxaA [Helicobacter pylori Hp H-42]
Length = 547
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|420483102|ref|ZP_14981736.1| inner membrane protein oxaA [Helicobacter pylori Hp P-2]
gi|420513569|ref|ZP_15012047.1| inner membrane protein oxaA [Helicobacter pylori Hp P-2b]
gi|393097706|gb|EJB98299.1| inner membrane protein oxaA [Helicobacter pylori Hp P-2]
gi|393155986|gb|EJC56257.1| inner membrane protein oxaA [Helicobacter pylori Hp P-2b]
Length = 547
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|302341714|ref|YP_003806243.1| YidC/Oxa1 family membrane protein insertase [Desulfarculus baarsii
DSM 2075]
gi|301638327|gb|ADK83649.1| membrane protein insertase, YidC/Oxa1 family [Desulfarculus baarsii
DSM 2075]
Length = 546
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 112/214 (52%), Gaps = 26/214 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG AII++TV++K +PL K ES M+ L PQ+ I+E+Y D++ + + +LYK
Sbjct: 352 YGVAIIIITVLIKLLFWPLQNKSYESMKKMQKLQPQIAKIREKYKDDKQEMNQQVMQLYK 411
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPL GCLP LA +PV+I Y+ L + + E + WI L+ P +
Sbjct: 412 TYKVNPLGGCLPMLAQVPVFIAFYKVLGS-SIELRHAPFWLWINDLSAPDRLP------- 463
Query: 241 ISWLFPFV-DGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
I + PFV DG P VL +L+ S +I+ K+ S DP + Q +
Sbjct: 464 IGFEIPFVGDGIP-----------VLTLLMGASMFITQKM--SPATGDP---TQQKMMML 507
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
+P++ ++ PSGL LYWF NLL QQ WL
Sbjct: 508 MPVIFTVMFINFPSGLVLYWFVQNLLGIGQQ-WL 540
>gi|424657894|ref|ZP_18095168.1| inner membrane protein oxaA [Vibrio cholerae HE-16]
gi|408057322|gb|EKG92174.1| inner membrane protein oxaA [Vibrio cholerae HE-16]
Length = 541
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 117/244 (47%), Gaps = 43/244 (17%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
WL I + +L V++ V +G AII LT IV+ A +PLTK Q S MR
Sbjct: 330 WLWFIAKPLHWLLSVIQS------VVINWGLAIICLTFIVRGAMYPLTKAQYTSMAKMRM 383
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+++A++ER D++R+ E LYK +NPL GCLP L +P++I LY AL +
Sbjct: 384 LQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVE 443
Query: 213 EGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVV 271
L FF WI L+ Y +LP+L+
Sbjct: 444 --LRHSPFFGWIHDLSAQD------------------------------PYYILPLLMGA 471
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
S ++ ++ + + DP Q + F+P+M +F L PSGL LYW +N+++ QQ
Sbjct: 472 SMFV-IQKMSPTTITDP---MQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQT 527
Query: 332 WLQK 335
+ K
Sbjct: 528 LIYK 531
>gi|153803663|ref|ZP_01958249.1| inner membrane protein, 60 kDa [Vibrio cholerae MZO-3]
gi|153830819|ref|ZP_01983486.1| inner membrane protein, 60 kDa [Vibrio cholerae 623-39]
gi|229515955|ref|ZP_04405412.1| OxaI/YidC membrane insertion protein [Vibrio cholerae TMA 21]
gi|254291134|ref|ZP_04961931.1| inner membrane protein, 60 kDa [Vibrio cholerae AM-19226]
gi|297581961|ref|ZP_06943881.1| inner membrane protein [Vibrio cholerae RC385]
gi|429885488|ref|ZP_19367074.1| Inner membrane protein translocase component YidC, long form
[Vibrio cholerae PS15]
gi|124120800|gb|EAY39543.1| inner membrane protein, 60 kDa [Vibrio cholerae MZO-3]
gi|148873703|gb|EDL71838.1| inner membrane protein, 60 kDa [Vibrio cholerae 623-39]
gi|150422979|gb|EDN14929.1| inner membrane protein, 60 kDa [Vibrio cholerae AM-19226]
gi|229347055|gb|EEO12017.1| OxaI/YidC membrane insertion protein [Vibrio cholerae TMA 21]
gi|297533828|gb|EFH72669.1| inner membrane protein [Vibrio cholerae RC385]
gi|429227710|gb|EKY33698.1| Inner membrane protein translocase component YidC, long form
[Vibrio cholerae PS15]
Length = 541
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 123/261 (47%), Gaps = 49/261 (18%)
Query: 82 DAVTTTKQNSD------WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAA 135
D + T N D WL I + +L V+++ + +G AII LT IV+ A
Sbjct: 313 DQMAATAPNLDLVVDYGWLWFIAKPLHWLLSVIQNFVGN------WGVAIICLTFIVRGA 366
Query: 136 TFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLA 195
+PLTK Q S MR L P+++A++ER D++R+ E LYK +NPL GCLP L
Sbjct: 367 MYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILL 426
Query: 196 TIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPL 254
+P++I LY AL + L FF WI L+
Sbjct: 427 QMPIFIALYWALMESVE--LRHSPFFGWIHDLSAQD------------------------ 460
Query: 255 GWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSG 314
Y +LP+L+ S ++ ++ + + DP Q + F+P+M +F L PSG
Sbjct: 461 ------PYYILPLLMGASMFV-IQKMSPTTITDP---MQQKIMTFMPVMFTFFFLWFPSG 510
Query: 315 LSLYWFTNNLLSTAQQVWLQK 335
L LYW +N+++ QQ + K
Sbjct: 511 LVLYWLVSNIVTLIQQTLIYK 531
>gi|383460053|ref|YP_005374042.1| inner membrane protein [Corallococcus coralloides DSM 2259]
gi|380733713|gb|AFE09715.1| inner membrane protein [Corallococcus coralloides DSM 2259]
Length = 606
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 143/298 (47%), Gaps = 45/298 (15%)
Query: 40 GSICVAKFGLRPDPNSADGVKELLGVAERLLFTLADAAVSSSDAVTTTKQNSDWLSGITN 99
G + +FG P D ++ + G R A A +S++ + D+
Sbjct: 329 GQVATFRFGGYAGPKDPDLLRIVPGTELR-----AVAGLSTTAFHPMLEDTVDF-----G 378
Query: 100 VMETVLKVLKDGMSTLH-VPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVK 158
+ V K+L M H + +G AIILLTV+VK A PLT + + S A++ L P+++
Sbjct: 379 IWAVVCKLLLAIMKFFHGIVGNWGVAIILLTVVVKLALLPLTYRSMVSMEAVKVLQPKME 438
Query: 159 AIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTE 218
I++++A D+ER LE +LY+ A +NPL GCLP L +PVWI L+ +L N + + E
Sbjct: 439 EIRKKFADDKERQNLEIMKLYQEAKVNPLGGCLPLLIQMPVWIALFTSLRNSFE--IYGE 496
Query: 219 GFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVK 278
FF GP W D Y +L ++ +S+
Sbjct: 497 PFF------GPI-------------------------WRD-LTYKDPTYILPLALGVSMI 524
Query: 279 IIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKF 336
I Q Q + ++ +T +P++ + L P+GLSLY FTNN+LS QQ L+K+
Sbjct: 525 ITQKMQPQMMDAAQARMMTWVMPIIFTFTLLQYPAGLSLYIFTNNVLSIGQQWGLRKW 582
>gi|420462839|ref|ZP_14961620.1| inner membrane protein oxaA [Helicobacter pylori Hp H-3]
gi|393078240|gb|EJB78984.1| inner membrane protein oxaA [Helicobacter pylori Hp H-3]
Length = 547
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|421341620|ref|ZP_15792031.1| inner membrane protein oxaA [Vibrio cholerae HC-43B1]
gi|395948248|gb|EJH58901.1| inner membrane protein oxaA [Vibrio cholerae HC-43B1]
Length = 482
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 123/261 (47%), Gaps = 49/261 (18%)
Query: 82 DAVTTTKQNSD------WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAA 135
D + T N D WL I + +L V+++ + +G AII LT IV+ A
Sbjct: 254 DQMAATAPNLDLVVDYGWLWFIAKPLHWLLSVIQNFVGN------WGVAIICLTFIVRGA 307
Query: 136 TFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLA 195
+PLTK Q S MR L P+++A++ER D++R+ E LYK +NPL GCLP L
Sbjct: 308 MYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILL 367
Query: 196 TIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPL 254
+P++I LY AL + L FF WI L+
Sbjct: 368 QMPIFIALYWALMESVE--LRHSPFFGWIHDLSAQD------------------------ 401
Query: 255 GWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSG 314
Y +LP+L+ S ++ ++ + + DP Q + F+P+M +F L PSG
Sbjct: 402 ------PYYILPLLMGASMFV-IQKMSPTTITDP---MQQKIMTFMPVMFTFFFLWFPSG 451
Query: 315 LSLYWFTNNLLSTAQQVWLQK 335
L LYW +N+++ QQ + K
Sbjct: 452 LVLYWLVSNIVTLIQQTLIYK 472
>gi|78776724|ref|YP_393039.1| inner membrane protein translocase component YidC [Sulfurimonas
denitrificans DSM 1251]
gi|78497264|gb|ABB43804.1| protein translocase subunit yidC [Sulfurimonas denitrificans DSM
1251]
Length = 536
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 113/226 (50%), Gaps = 44/226 (19%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++I+ LTV+++ +PLT K + S M+ +APQVKA+Q +Y GD +R+ +YK
Sbjct: 336 WGWSIVALTVLIRVVLYPLTYKGMVSMQKMKDIAPQVKALQAKYKGDPQRMNAAVMDMYK 395
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP L IPV+ +YR L N +
Sbjct: 396 KHGANPLGGCLPMLLQIPVFFAIYRVLLNAVE---------------------------- 427
Query: 241 ISWLFPFVDGHPPLGWSDTFAYL----VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
+ G P + W + + + VLP+L+ S Y K+ S+ DP + +
Sbjct: 428 -------LQGAPWMLWVNDLSRMDSTFVLPILMGASMYYQQKLTPSN-FTDP---LQEKI 476
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAKD 341
FLP++ +F ++ PSGL LYWF NN+ S QQ + Q+F AKD
Sbjct: 477 FKFLPIIFTFFFITFPSGLVLYWFVNNMFSIGQQFIVNQQFKNAKD 522
>gi|359150824|ref|ZP_09183627.1| putative inner membrane protein translocase component YidC
[Streptomyces sp. S4]
Length = 414
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 121/226 (53%), Gaps = 18/226 (7%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L ++++ PL KQ++++ AM++L P++K IQERY D++R E +L
Sbjct: 19 WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDKQRQSEEMMKL 78
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNG 238
YK AG NPLA CLP L P + LY L+++A T GF LA A + +
Sbjct: 79 YKDAGTNPLASCLPILLQSPFFFALYHVLNSIASNK--TIGFIDEALLAS----AQKAHI 132
Query: 239 SGISWLFPFVDGH---PPLGWSDTFAYLVLPVLLVV---SQYISVKIIQSSQNND----- 287
G F D LG S T ++V V++V+ SQ+ + + + ++N D
Sbjct: 133 VGAPLAAKFTDNADKIEALGSSTTNVHIVTAVMIVLMSASQFFTQRQLM-TKNVDTTVKT 191
Query: 288 PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P+M F ++ P G+ +YW T N+ + QQ+++
Sbjct: 192 PFMQQQKMLMYVFPIMFAVFGINFPVGVLVYWLTTNMWTMGQQMYV 237
>gi|384891792|ref|YP_005765925.1| Inner membrane protein translocase component [Helicobacter pylori
908]
gi|385224472|ref|YP_005784398.1| putative inner membrane protein translocase component [Helicobacter
pylori 2017]
gi|385232325|ref|YP_005792244.1| Inner membrane protein translocase component [Helicobacter pylori
2018]
gi|307638101|gb|ADN80551.1| Inner membrane protein translocase component [Helicobacter pylori
908]
gi|325996702|gb|ADZ52107.1| Inner membrane protein translocase component [Helicobacter pylori
2018]
gi|325998294|gb|ADZ50502.1| putative inner membrane protein translocase component [Helicobacter
pylori 2017]
Length = 547
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|420432908|ref|ZP_14931921.1| inner membrane protein oxaA [Helicobacter pylori Hp H-16]
gi|393046998|gb|EJB47977.1| inner membrane protein oxaA [Helicobacter pylori Hp H-16]
Length = 545
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|420442791|ref|ZP_14941722.1| inner membrane protein oxaA [Helicobacter pylori Hp H-36]
gi|393056736|gb|EJB57646.1| inner membrane protein oxaA [Helicobacter pylori Hp H-36]
Length = 547
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|420496367|ref|ZP_14994930.1| inner membrane protein oxaA [Helicobacter pylori Hp P-23]
gi|393110425|gb|EJC10950.1| inner membrane protein oxaA [Helicobacter pylori Hp P-23]
Length = 548
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 110/223 (49%), Gaps = 35/223 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPM 343
PL+ F ++ P+GL LYW TNN+LS QQ+ + K K M
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILENKKRM 540
>gi|229524907|ref|ZP_04414312.1| OxaI/YidC membrane insertion protein [Vibrio cholerae bv. albensis
VL426]
gi|229338488|gb|EEO03505.1| OxaI/YidC membrane insertion protein [Vibrio cholerae bv. albensis
VL426]
Length = 541
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 117/244 (47%), Gaps = 43/244 (17%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
WL I + +L V++ V +G AII LT IV+ A +PLTK Q S MR
Sbjct: 330 WLWFIAKPLHWLLSVIQS------VVINWGLAIICLTFIVRGAMYPLTKAQYTSMAKMRM 383
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+++A++ER D++R+ E LYK +NPL GCLP L +P++I LY AL +
Sbjct: 384 LQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVE 443
Query: 213 EGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVV 271
L FF WI L+ Y +LP+L+
Sbjct: 444 --LRHSPFFGWIHDLSAQD------------------------------PYYILPLLMGA 471
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
S ++ ++ + + DP Q + F+P+M +F L PSGL LYW +N+++ QQ
Sbjct: 472 SMFV-IQKMSPTTITDP---MQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQT 527
Query: 332 WLQK 335
+ K
Sbjct: 528 LIYK 531
>gi|425432220|ref|ZP_18812793.1| membrane protein insertase, YidC/Oxa1 family domain protein
[Helicobacter pylori GAM100Ai]
gi|410715227|gb|EKQ72651.1| membrane protein insertase, YidC/Oxa1 family domain protein
[Helicobacter pylori GAM100Ai]
Length = 547
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|420473049|ref|ZP_14971730.1| inner membrane protein oxaA [Helicobacter pylori Hp H-18]
gi|393086553|gb|EJB87227.1| inner membrane protein oxaA [Helicobacter pylori Hp H-18]
Length = 547
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|254226943|ref|ZP_04920509.1| inner membrane protein, 60 kDa [Vibrio cholerae V51]
gi|125620548|gb|EAZ48916.1| inner membrane protein, 60 kDa [Vibrio cholerae V51]
Length = 482
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 123/261 (47%), Gaps = 49/261 (18%)
Query: 82 DAVTTTKQNSD------WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAA 135
D + T N D WL I + +L V+++ + +G AII LT IV+ A
Sbjct: 254 DQMAATAPNLDLVVDYGWLWFIAKPLHWLLSVIQNFVGN------WGVAIICLTFIVRGA 307
Query: 136 TFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLA 195
+PLTK Q S MR L P+++A++ER D++R+ E LYK +NPL GCLP L
Sbjct: 308 MYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILL 367
Query: 196 TIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPL 254
+P++I LY AL + L FF WI L+
Sbjct: 368 QMPIFIALYWALMESVE--LRHSPFFGWIHDLSAQD------------------------ 401
Query: 255 GWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSG 314
Y +LP+L+ S ++ ++ + + DP Q + F+P+M +F L PSG
Sbjct: 402 ------PYYILPLLMGASMFV-IQKMSPTTITDP---MQQKIMTFMPVMFTFFFLWFPSG 451
Query: 315 LSLYWFTNNLLSTAQQVWLQK 335
L LYW +N+++ QQ + K
Sbjct: 452 LVLYWLVSNIVTLIQQTLIYK 472
>gi|420499604|ref|ZP_14998160.1| inner membrane protein oxaA [Helicobacter pylori Hp P-26]
gi|393151806|gb|EJC52109.1| inner membrane protein oxaA [Helicobacter pylori Hp P-26]
Length = 547
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|187918308|ref|YP_001883871.1| putative inner membrane protein translocase component YidC
[Borrelia hermsii DAH]
gi|254772751|sp|B2S0E5.1|YIDC_BORHD RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|119861156|gb|AAX16951.1| 60 kDa inner membrane protein YidC [Borrelia hermsii DAH]
Length = 545
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 113/215 (52%), Gaps = 20/215 (9%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+ LT++V+ FPLT K ++ + L P++K IQ ++ D +R+ E +LY+
Sbjct: 341 WGLSIMFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQVKFKNDPKRLNEEMGKLYR 400
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G+NPL GC P L +PV+ LY ++N L G +IP +I G
Sbjct: 401 EEGVNPLGGCFPILLQLPVFFALYGLVNNF----FLLRGASFIPGWIDDLSI-----GDS 451
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF- 299
I + G+ W+D +LP +++V+Q IS I SS + ++ S Q + F
Sbjct: 452 IYYF-----GYKVFMWTDI---RILPFIMMVTQLIST--IISSNVSFKSLGSQQKILYFG 501
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
+P+M + +PSGL +YW T N+ + QQ +++
Sbjct: 502 MPIMFFFILYDMPSGLLIYWITTNIFTILQQYYIK 536
>gi|420407821|ref|ZP_14906980.1| inner membrane protein oxaA [Helicobacter pylori NQ4216]
gi|393025306|gb|EJB26412.1| inner membrane protein oxaA [Helicobacter pylori NQ4216]
Length = 547
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 111/215 (51%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + ++ DP + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWHQGVTPNTM-TDP---MQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|210135616|ref|YP_002302055.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori P12]
gi|210133584|gb|ACJ08575.1| inner membrane protein translocase component [Helicobacter pylori
P12]
Length = 546
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|420457761|ref|ZP_14956573.1| inner membrane protein oxaA [Helicobacter pylori Hp A-16]
gi|393071636|gb|EJB72418.1| inner membrane protein oxaA [Helicobacter pylori Hp A-16]
Length = 549
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 355 WGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 414
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 415 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLS------------- 460
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 461 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 499
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 500 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 534
>gi|420469560|ref|ZP_14968277.1| inner membrane protein oxaA [Helicobacter pylori Hp H-10]
gi|393083605|gb|EJB84308.1| inner membrane protein oxaA [Helicobacter pylori Hp H-10]
Length = 547
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|420421131|ref|ZP_14920213.1| inner membrane protein oxaA [Helicobacter pylori NQ4161]
gi|393035067|gb|EJB36116.1| inner membrane protein oxaA [Helicobacter pylori NQ4161]
Length = 548
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 110/223 (49%), Gaps = 35/223 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPM 343
PL+ F ++ P+GL LYW TNN+LS QQ+ + K K M
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILENKKRM 540
>gi|148556519|ref|YP_001264101.1| putative inner membrane protein translocase component YidC
[Sphingomonas wittichii RW1]
gi|148501709|gb|ABQ69963.1| protein translocase subunit yidC [Sphingomonas wittichii RW1]
Length = 577
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 112/218 (51%), Gaps = 23/218 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII+LT +V+ FP+ +KQ S MR + P++K +QER D+ R+Q E +LY+
Sbjct: 361 FGVAIIILTFLVRGLMFPIAQKQFRSMAGMRRVQPKMKELQERLKDDKPRLQQELLKLYQ 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPLAGCLP L IPV+ LY+ L V E WI L+ P +
Sbjct: 421 EEKVNPLAGCLPILVQIPVFYALYKVLM-VTIEMRHQPFVLWIRDLSAPDPLHVLN---- 475
Query: 241 ISWLFPFVDGHPPLGWSDTFAYL---VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALT 297
LF +D PP A+L VL +LL VS ++ K+ N P + + +
Sbjct: 476 ---LFGLLDFTPP-------AFLGIGVLALLLGVSMWLQFKL-----NPQPMDDAQKQVF 520
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+P ++ + +GL +YW T+N L+ AQQ WL +
Sbjct: 521 ALMPWIMMFIMAPFAAGLLIYWVTSNFLTIAQQAWLYR 558
>gi|421712561|ref|ZP_16151893.1| inner membrane protein oxaA [Helicobacter pylori R32b]
gi|407217362|gb|EKE87195.1| inner membrane protein oxaA [Helicobacter pylori R32b]
Length = 548
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|420454374|ref|ZP_14953207.1| inner membrane protein oxaA [Helicobacter pylori Hp A-8]
gi|393067695|gb|EJB68502.1| inner membrane protein oxaA [Helicobacter pylori Hp A-8]
Length = 549
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 355 WGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 414
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 415 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 460
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 461 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 499
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 500 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 534
>gi|420460931|ref|ZP_14959726.1| inner membrane protein oxaA [Helicobacter pylori Hp A-27]
gi|393074505|gb|EJB75264.1| inner membrane protein oxaA [Helicobacter pylori Hp A-27]
Length = 544
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 349 WGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHIMQLYK 408
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 409 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 454
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 455 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 493
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 494 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 528
>gi|149190488|ref|ZP_01868759.1| putative inner membrane protein translocase component YidC [Vibrio
shilonii AK1]
gi|148835742|gb|EDL52708.1| putative inner membrane protein translocase component YidC [Vibrio
shilonii AK1]
Length = 540
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 136/293 (46%), Gaps = 53/293 (18%)
Query: 44 VAKFGLR-PDPNSADG----VKELLGVAERLLFTLADAAVSSSDAVTTTKQNSDWLSGIT 98
+ G+R P+ ADG +K L +L +A+ A + V + WL I
Sbjct: 280 LGDIGVRMPNATIADGQSATLKATLWAGPKLQKQMAETAPNLDLVV-----DYGWLWFIA 334
Query: 99 NVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVK 158
+ T+L ++ + +G AII LT IV+ A +PLTK Q S MR L P+++
Sbjct: 335 KPLHTLLSFIQG------IVVNWGLAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQ 388
Query: 159 AIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTE 218
A++ER D++R+ E LYK +NPL GCLP L +P++I LY AL + L
Sbjct: 389 AMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVE--LRHS 446
Query: 219 GFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISV 277
FF WI L+ Y +LP+L+ S ++ +
Sbjct: 447 PFFGWIHDLSAQD------------------------------PYYILPLLMGASMFL-I 475
Query: 278 KIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+ + + DP Q + F+P+M +F L PSGL LYW +N+++ QQ
Sbjct: 476 QKMSPTTVTDP---MQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQ 525
>gi|422921250|ref|ZP_16954499.1| inner membrane protein oxaA [Vibrio cholerae BJG-01]
gi|341649439|gb|EGS73415.1| inner membrane protein oxaA [Vibrio cholerae BJG-01]
Length = 541
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 123/261 (47%), Gaps = 49/261 (18%)
Query: 82 DAVTTTKQNSD------WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAA 135
D + T N D WL I + +L V+++ + +G AII LT IV+ A
Sbjct: 313 DQMAATAPNLDLVVDYGWLWFIAKPLHWLLSVIQNFVGN------WGVAIICLTFIVRGA 366
Query: 136 TFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLA 195
+PLTK Q S MR L P+++A++ER D++R+ E LYK +NPL GCLP L
Sbjct: 367 MYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILL 426
Query: 196 TIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPL 254
+P++I LY AL + L FF WI L+
Sbjct: 427 QMPIFIALYWALMESVE--LRHSPFFGWIHDLSAQD------------------------ 460
Query: 255 GWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSG 314
Y +LP+L+ S ++ ++ + + DP Q + F+P+M +F L PSG
Sbjct: 461 ------PYYILPLLMGASMFV-IQKMSPTTITDP---IQQKIMTFMPVMFTFFFLWFPSG 510
Query: 315 LSLYWFTNNLLSTAQQVWLQK 335
L LYW +N+++ QQ + K
Sbjct: 511 LVLYWLVSNIVTLIQQTLIYK 531
>gi|420500246|ref|ZP_14998792.1| inner membrane protein oxaA [Helicobacter pylori Hp P-30]
gi|393152013|gb|EJC52314.1| inner membrane protein oxaA [Helicobacter pylori Hp P-30]
Length = 546
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 110/223 (49%), Gaps = 35/223 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPM 343
PL+ F ++ P+GL LYW TNN+LS QQ+ + K K M
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILENKKRM 538
>gi|385227611|ref|YP_005787535.1| membrane protein insertase [Helicobacter pylori SNT49]
gi|344332524|gb|AEN17554.1| membrane protein insertase [Helicobacter pylori SNT49]
Length = 548
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ L P++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKELTPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|291452650|ref|ZP_06592040.1| membrane protein oxaA [Streptomyces albus J1074]
gi|421740550|ref|ZP_16178800.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[Streptomyces sp. SM8]
gi|291355599|gb|EFE82501.1| membrane protein oxaA [Streptomyces albus J1074]
gi|406691075|gb|EKC94846.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[Streptomyces sp. SM8]
Length = 431
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 121/226 (53%), Gaps = 18/226 (7%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L ++++ PL KQ++++ AM++L P++K IQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDKQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNG 238
YK AG NPLA CLP L P + LY L+++A T GF LA A + +
Sbjct: 96 YKDAGTNPLASCLPILLQSPFFFALYHVLNSIASNK--TIGFIDEALLAS----AQKAHI 149
Query: 239 SGISWLFPFVDGH---PPLGWSDTFAYLVLPVLLVV---SQYISVKIIQSSQNND----- 287
G F D LG S T ++V V++V+ SQ+ + + + ++N D
Sbjct: 150 VGAPLAAKFTDNADKIEALGSSTTNVHIVTAVMIVLMSASQFFTQRQLM-TKNVDTTVKT 208
Query: 288 PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P+M F ++ P G+ +YW T N+ + QQ+++
Sbjct: 209 PFMQQQKMLMYVFPIMFAVFGINFPVGVLVYWLTTNMWTMGQQMYV 254
>gi|41469652|gb|AAS07375.1| putative inner membrane protein (with alternative splicing) [Oryza
sativa Japonica Group]
Length = 185
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 69/91 (75%), Gaps = 6/91 (6%)
Query: 59 VKELLGVAERLLFTLADAAVSSSDAVT------TTKQNSDWLSGITNVMETVLKVLKDGM 112
V EL G E L+T+ADAAVS+S V T + DWLSGITN METVLKVLKDG+
Sbjct: 59 VGELFGRVEAFLYTVADAAVSASPEVVQGGGGGTKEAAGDWLSGITNSMETVLKVLKDGL 118
Query: 113 STLHVPYAYGFAIILLTVIVKAATFPLTKKQ 143
S LHVPY YGFAIILLTV+VKAATFPLTKKQ
Sbjct: 119 SALHVPYPYGFAIILLTVLVKAATFPLTKKQ 149
>gi|420505256|ref|ZP_15003772.1| inner membrane protein oxaA [Helicobacter pylori Hp P-74]
gi|393116788|gb|EJC17292.1| inner membrane protein oxaA [Helicobacter pylori Hp P-74]
Length = 549
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 355 WGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 414
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 415 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLS------------- 460
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 461 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 499
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 500 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 534
>gi|421720485|ref|ZP_16159765.1| inner membrane protein oxaA [Helicobacter pylori R046Wa]
gi|407219077|gb|EKE88894.1| inner membrane protein oxaA [Helicobacter pylori R046Wa]
Length = 546
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|223937849|ref|ZP_03629749.1| 60 kDa inner membrane insertion protein [bacterium Ellin514]
gi|223893455|gb|EEF59916.1| 60 kDa inner membrane insertion protein [bacterium Ellin514]
Length = 604
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 121/240 (50%), Gaps = 32/240 (13%)
Query: 97 ITNVME-----TVLKVLKDGMSTLH--VPYAYGFAIILLTVIVKAATFPLTKKQVESSMA 149
I VME + K+L GM+ LH + +YG IIL+TV++K +PLT +S
Sbjct: 363 IDKVMEFGLFSPISKMLLLGMNWLHHRLSVSYGLTIILITVLIKIVFWPLTAFSTKSMKR 422
Query: 150 MRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSN 209
M++L PQ+KAIQE+Y + +++ +T Y+ +NPL GCLP L IPV+ G + +
Sbjct: 423 MQALQPQIKAIQEKYKDEPQKVSQKTMEFYRKNKVNPLGGCLPALLQIPVFFGFFAMMRG 482
Query: 210 VADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLL 269
+ L F W+ L+ P TI ++ P + F +P+L+
Sbjct: 483 AIE--LRGAHFLWMGDLSQPDTI----------FIIPGFN----------FPINPMPLLM 520
Query: 270 VVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
V+ + + S DP + Q + F+PLMI F S PSGL+LY+ NLL+ Q
Sbjct: 521 GVTMLWQISLAPPSPGMDP---AQQKMMKFMPLMILLFVYSQPSGLALYYTVQNLLTILQ 577
>gi|420419404|ref|ZP_14918494.1| inner membrane protein oxaA [Helicobacter pylori NQ4076]
gi|393031310|gb|EJB32382.1| inner membrane protein oxaA [Helicobacter pylori NQ4076]
Length = 547
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW NN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTINNILSVLQQLIINK 532
>gi|420410774|ref|ZP_14909910.1| inner membrane protein oxaA [Helicobacter pylori NQ4200]
gi|393025987|gb|EJB27087.1| inner membrane protein oxaA [Helicobacter pylori NQ4200]
Length = 550
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ +AP++K +QE+Y G+ +++Q +LYK
Sbjct: 355 WGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKEIAPKMKELQEKYKGEPQKLQAHMMQLYK 414
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 415 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 460
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 461 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 499
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 500 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 534
>gi|419537409|ref|ZP_14076852.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 111-3]
gi|419540817|ref|ZP_14080048.1| putative inner membrane protein translocase component YidC
[Campylobacter coli Z163]
gi|419543079|ref|ZP_14082176.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 2548]
gi|419553439|ref|ZP_14091682.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 2692]
gi|419614765|ref|ZP_14148536.1| putative inner membrane protein translocase component YidC
[Campylobacter coli H56]
gi|419616675|ref|ZP_14150318.1| putative inner membrane protein translocase component YidC
[Campylobacter coli Z156]
gi|380514789|gb|EIA40992.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 111-3]
gi|380515963|gb|EIA42107.1| putative inner membrane protein translocase component YidC
[Campylobacter coli Z163]
gi|380521096|gb|EIA46844.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 2548]
gi|380528776|gb|EIA54001.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 2692]
gi|380592331|gb|EIB13237.1| putative inner membrane protein translocase component YidC
[Campylobacter coli H56]
gi|380595256|gb|EIB16002.1| putative inner membrane protein translocase component YidC
[Campylobacter coli Z156]
Length = 531
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 124/253 (49%), Gaps = 41/253 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + + +G+AI+++ +I++ FPLT K + S ++
Sbjct: 318 WFTFIAKPMFEFLNFLHNHIGN------WGWAIVIMVLIIRIILFPLTYKSMISMNKLKD 371
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K ++ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 372 LAPKMKELRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 430
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L S Y +LP+L+ V+
Sbjct: 431 ELKAAPWAFWIHDL------------------------------SVMDPYFILPILMGVT 460
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
+I ++I DP M++ + FLP++ +F ++ P+GL+LYWF NNL S QQ
Sbjct: 461 MFIQ-QLITPMTIQDP-MQAK--IMKFLPIIFTFFFITFPAGLTLYWFVNNLCSLVQQWV 516
Query: 333 LQKFGGAKDPMKQ 345
+ K + KQ
Sbjct: 517 INKMFAKEHHKKQ 529
>gi|385221371|ref|YP_005782843.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori India7]
gi|317010178|gb|ADU80758.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori India7]
Length = 546
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ L P++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKELTPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|417822169|ref|ZP_12468771.1| inner membrane protein oxaA [Vibrio cholerae HE48]
gi|340049782|gb|EGR10694.1| inner membrane protein oxaA [Vibrio cholerae HE48]
Length = 541
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 122/261 (46%), Gaps = 49/261 (18%)
Query: 82 DAVTTTKQNSD------WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAA 135
D + T N D WL I + +L V++ + +G AII LT IV+ A
Sbjct: 313 DQMAATAPNLDLVVDYGWLWFIAKPLHWLLSVIQSFVGN------WGVAIICLTFIVRGA 366
Query: 136 TFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLA 195
+PLTK Q S MR L P+++A++ER D++R+ E LYK +NPL GCLP L
Sbjct: 367 MYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILL 426
Query: 196 TIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPL 254
+P++I LY AL + L FF WI L+
Sbjct: 427 QMPIFIALYWALMESVE--LRHSPFFGWIHDLSAQD------------------------ 460
Query: 255 GWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSG 314
Y +LP+L+ S ++ ++ + + DP Q + F+P+M +F L PSG
Sbjct: 461 ------PYYILPLLMGASMFV-IQKMSPTTITDP---MQQKIMTFMPVMFTFFFLWFPSG 510
Query: 315 LSLYWFTNNLLSTAQQVWLQK 335
L LYW +N+++ QQ + K
Sbjct: 511 LVLYWLVSNIVTLIQQTLIYK 531
>gi|385219705|ref|YP_005781180.1| membrane protein insertase [Helicobacter pylori Gambia94/24]
gi|317014863|gb|ADU82299.1| membrane protein insertase [Helicobacter pylori Gambia94/24]
Length = 547
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|422305402|ref|ZP_16392607.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
CP1035(8)]
gi|408629028|gb|EKL01742.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
CP1035(8)]
Length = 541
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 122/261 (46%), Gaps = 49/261 (18%)
Query: 82 DAVTTTKQNSD------WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAA 135
D + T N D WL I + +L V++ + +G AII LT IV+ A
Sbjct: 313 DQMAATAPNLDLVVDYGWLWFIAKPLHWLLSVIQSFVGN------WGVAIICLTFIVRGA 366
Query: 136 TFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLA 195
+PLTK Q S MR L P+++A++ER D++R+ E LYK +NPL GCLP L
Sbjct: 367 MYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILL 426
Query: 196 TIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPL 254
+P++I LY AL + L FF WI L+
Sbjct: 427 QMPIFIALYWALMESVE--LRHSPFFGWIHDLSAQD------------------------ 460
Query: 255 GWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSG 314
Y +LP+L+ S ++ ++ + + DP Q + F+P+M +F L PSG
Sbjct: 461 ------PYYILPLLMGASMFV-IQKMSPTTITDP---MQQKIMTFMPVMFTFFFLWFPSG 510
Query: 315 LSLYWFTNNLLSTAQQVWLQK 335
L LYW +N+++ QQ + K
Sbjct: 511 LVLYWLVSNIVTLIQQTLIYK 531
>gi|229520178|ref|ZP_04409605.1| OxaI/YidC membrane insertion protein [Vibrio cholerae TM 11079-80]
gi|229342772|gb|EEO07763.1| OxaI/YidC membrane insertion protein [Vibrio cholerae TM 11079-80]
Length = 482
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 122/261 (46%), Gaps = 49/261 (18%)
Query: 82 DAVTTTKQNSD------WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAA 135
D + T N D WL I + +L V++ + +G AII LT IV+ A
Sbjct: 254 DQMAATAPNLDLVVDYGWLWFIAKPLHWLLSVIQSFVGN------WGVAIICLTFIVRGA 307
Query: 136 TFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLA 195
+PLTK Q S MR L P+++A++ER D++R+ E LYK +NPL GCLP L
Sbjct: 308 MYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILL 367
Query: 196 TIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPL 254
+P++I LY AL + L FF WI L+
Sbjct: 368 QMPIFIALYWALMESVE--LRHSPFFGWIHDLSAQD------------------------ 401
Query: 255 GWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSG 314
Y +LP+L+ S ++ ++ + + DP Q + F+P+M +F L PSG
Sbjct: 402 ------PYYILPLLMGASMFV-IQKMSPTTITDP---MQQKIMTFMPVMFTFFFLWFPSG 451
Query: 315 LSLYWFTNNLLSTAQQVWLQK 335
L LYW +N+++ QQ + K
Sbjct: 452 LVLYWLVSNIVTLIQQTLIYK 472
>gi|229530208|ref|ZP_04419597.1| OxaI/YidC membrane insertion protein [Vibrio cholerae 12129(1)]
gi|229332341|gb|EEN97828.1| OxaI/YidC membrane insertion protein [Vibrio cholerae 12129(1)]
Length = 541
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 122/261 (46%), Gaps = 49/261 (18%)
Query: 82 DAVTTTKQNSD------WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAA 135
D + T N D WL I + +L V++ + +G AII LT IV+ A
Sbjct: 313 DQMAATAPNLDLVVDYGWLWFIAKPLHWLLSVIQSFVGN------WGVAIICLTFIVRGA 366
Query: 136 TFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLA 195
+PLTK Q S MR L P+++A++ER D++R+ E LYK +NPL GCLP L
Sbjct: 367 MYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILL 426
Query: 196 TIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPL 254
+P++I LY AL + L FF WI L+
Sbjct: 427 QMPIFIALYWALMESVE--LRHSPFFGWIHDLSAQD------------------------ 460
Query: 255 GWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSG 314
Y +LP+L+ S ++ ++ + + DP Q + F+P+M +F L PSG
Sbjct: 461 ------PYYILPLLMGASMFV-IQKMSPTTITDP---MQQKIMTFMPVMFTFFFLWFPSG 510
Query: 315 LSLYWFTNNLLSTAQQVWLQK 335
L LYW +N+++ QQ + K
Sbjct: 511 LVLYWLVSNIVTLIQQTLIYK 531
>gi|419605470|ref|ZP_14139905.1| membrane protein insertase [Campylobacter coli LMG 9853]
gi|380578117|gb|EIA99993.1| membrane protein insertase [Campylobacter coli LMG 9853]
Length = 531
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 124/253 (49%), Gaps = 41/253 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + + +G+AI+++ +I++ FPLT K + S ++
Sbjct: 318 WFTFIAKPMFEFLNFLHNHIGN------WGWAIVIMVLIIRIILFPLTYKSMISMNKLKD 371
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K ++ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 372 LAPKMKELRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 430
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L S Y +LP+L+ V+
Sbjct: 431 ELKAAPWAFWIHDL------------------------------SVMDPYFILPILMGVT 460
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
+I ++I DP M++ + FLP++ +F ++ P+GL+LYWF NNL S QQ
Sbjct: 461 MFIQ-QLITPMTIQDP-MQAK--IMKFLPIIFTFFFITFPAGLTLYWFVNNLCSLVQQWV 516
Query: 333 LQKFGGAKDPMKQ 345
+ K + KQ
Sbjct: 517 INKMFAKEHHKKQ 529
>gi|419539368|ref|ZP_14078701.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 90-3]
gi|419547631|ref|ZP_14086325.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 2680]
gi|419551313|ref|ZP_14089768.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 2688]
gi|419557821|ref|ZP_14095718.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 80352]
gi|419577728|ref|ZP_14114273.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 59-2]
gi|419596948|ref|ZP_14131940.1| putative inner membrane protein translocase component YidC
[Campylobacter coli LMG 23341]
gi|419598708|ref|ZP_14133585.1| putative inner membrane protein translocase component YidC
[Campylobacter coli LMG 23342]
gi|380515207|gb|EIA41385.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 90-3]
gi|380520222|gb|EIA46111.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 2680]
gi|380528688|gb|EIA53925.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 2688]
gi|380541115|gb|EIA65394.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 80352]
gi|380556590|gb|EIA79836.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 59-2]
gi|380574686|gb|EIA96781.1| putative inner membrane protein translocase component YidC
[Campylobacter coli LMG 23341]
gi|380576933|gb|EIA98978.1| putative inner membrane protein translocase component YidC
[Campylobacter coli LMG 23342]
Length = 531
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 124/253 (49%), Gaps = 41/253 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + + +G+AI+++ +I++ FPLT K + S ++
Sbjct: 318 WFTFIAKPMFEFLNFLHNHIGN------WGWAIVIMVLIIRIILFPLTYKSMISMNKLKD 371
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K ++ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 372 LAPKMKELRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 430
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L S Y +LP+L+ V+
Sbjct: 431 ELKAAPWAFWIHDL------------------------------SVMDPYFILPILMGVT 460
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
+I ++I DP M++ + FLP++ +F ++ P+GL+LYWF NNL S QQ
Sbjct: 461 MFIQ-QLITPMTIQDP-MQAK--IMKFLPIIFTFFFITFPAGLTLYWFVNNLCSLVQQWV 516
Query: 333 LQKFGGAKDPMKQ 345
+ K + KQ
Sbjct: 517 INKMFAKEHHKKQ 529
>gi|121730052|ref|ZP_01682461.1| inner membrane protein, 60 kDa [Vibrio cholerae V52]
gi|121628201|gb|EAX60724.1| inner membrane protein, 60 kDa [Vibrio cholerae V52]
Length = 510
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 122/261 (46%), Gaps = 49/261 (18%)
Query: 82 DAVTTTKQNSD------WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAA 135
D + T N D WL I + +L V++ + +G AII LT IV+ A
Sbjct: 282 DQMAATAPNLDLVVDYGWLWFIAKPLHWLLSVIQTFVGN------WGVAIICLTFIVRGA 335
Query: 136 TFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLA 195
+PLTK Q S MR L P+++A++ER D++R+ E LYK +NPL GCLP L
Sbjct: 336 MYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILL 395
Query: 196 TIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPL 254
+P++I LY AL + L FF WI L+
Sbjct: 396 QMPIFIALYWALMESVE--LRHSPFFGWIHDLSAQD------------------------ 429
Query: 255 GWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSG 314
Y +LP+L+ S ++ ++ + + DP Q + F+P+M +F L PSG
Sbjct: 430 ------PYYILPLLMGASMFV-IQKMSPTTITDP---MQQKIMTFMPVMFTFFFLWFPSG 479
Query: 315 LSLYWFTNNLLSTAQQVWLQK 335
L LYW +N+++ QQ + K
Sbjct: 480 LVLYWLVSNIVTLIQQTLIYK 500
>gi|343493271|ref|ZP_08731599.1| membrane protein insertase [Vibrio nigripulchritudo ATCC 27043]
gi|342826358|gb|EGU60791.1| membrane protein insertase [Vibrio nigripulchritudo ATCC 27043]
Length = 542
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 106/211 (50%), Gaps = 37/211 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI++LT IV+ A +PLTK Q S MR L P+++A++ER D++R+ E LYK
Sbjct: 353 WGLAIMVLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGS 239
+NPL GCLP L +P++I LY AL + L FF WI L+
Sbjct: 413 KEKVNPLGGCLPILLQMPIFIALYWALMESVE--LRHSPFFGWITDLSAQD--------- 461
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
Y +LPVL+ S ++ ++ + S DP Q + N
Sbjct: 462 ---------------------PYYILPVLMGASMFM-IQKMSPSTITDP---MQQKIMNL 496
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+P+M +F L PSGL LYW +N+++ QQ
Sbjct: 497 MPIMFTFFFLWFPSGLVLYWLVSNVVTVIQQ 527
>gi|365838859|ref|ZP_09380116.1| stage III sporulation protein J family protein [Anaeroglobus
geminatus F0357]
gi|364566369|gb|EHM44061.1| stage III sporulation protein J family protein [Anaeroglobus
geminatus F0357]
Length = 217
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 113/214 (52%), Gaps = 33/214 (15%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YG AII+LTVI+K PLT KQ+ S M+ L P++K +Q++Y G+Q+++Q E ++LY
Sbjct: 26 SYGIAIIMLTVIIKLILSPLTAKQIRSMEGMQLLQPKIKELQKKYKGNQKKLQEEMSKLY 85
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
K G+NP +GCLP L +P + ++ AL + + + F W+ SL P
Sbjct: 86 KEMGVNPFSGCLPILIQMPFLVSIFYALRSYPYDP-AYQSFLWLSSLGEP---------- 134
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNN--DPNMKSSQALT 297
DG +LPVL +S ++ K + +Q++ P + +
Sbjct: 135 ---------DGT-----------YILPVLSALSTFLIQKQMTGAQSDVEGPQAMQQKIMK 174
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
+PL IG+ +L+ PSGL +YW +N+ QQ+
Sbjct: 175 VAMPLFIGWISLTFPSGLVIYWIISNIFQGGQQM 208
>gi|57167877|ref|ZP_00367017.1| 60 kDa inner-membrane protein [Campylobacter coli RM2228]
gi|419544910|ref|ZP_14083850.1| membrane protein insertase [Campylobacter coli 2553]
gi|419548433|ref|ZP_14087057.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 2685]
gi|419556151|ref|ZP_14094143.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 84-2]
gi|419561384|ref|ZP_14098995.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 86119]
gi|419563407|ref|ZP_14100854.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1091]
gi|419564815|ref|ZP_14102183.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1098]
gi|419566990|ref|ZP_14104231.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1148]
gi|419567882|ref|ZP_14105033.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1417]
gi|419573961|ref|ZP_14110742.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1891]
gi|419576125|ref|ZP_14112791.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1909]
gi|419579968|ref|ZP_14116354.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1948]
gi|419582014|ref|ZP_14118288.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1957]
gi|419583662|ref|ZP_14119835.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1961]
gi|419585902|ref|ZP_14121940.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 202/04]
gi|419591599|ref|ZP_14126944.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 37/05]
gi|419592908|ref|ZP_14128147.1| putative inner membrane protein translocase component YidC
[Campylobacter coli LMG 9854]
gi|419603611|ref|ZP_14138149.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 151-9]
gi|419606738|ref|ZP_14141094.1| putative inner membrane protein translocase component YidC
[Campylobacter coli LMG 9860]
gi|419610008|ref|ZP_14144082.1| membrane protein insertase [Campylobacter coli H8]
gi|57020999|gb|EAL57663.1| 60 kDa inner-membrane protein [Campylobacter coli RM2228]
gi|380524615|gb|EIA50215.1| membrane protein insertase [Campylobacter coli 2553]
gi|380527448|gb|EIA52828.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 2685]
gi|380535094|gb|EIA59828.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 84-2]
gi|380535690|gb|EIA60377.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 86119]
gi|380538187|gb|EIA62699.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1091]
gi|380541278|gb|EIA65549.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1098]
gi|380544884|gb|EIA68888.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1148]
gi|380547085|gb|EIA71015.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1417]
gi|380550475|gb|EIA74133.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1891]
gi|380551727|gb|EIA75308.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1909]
gi|380555792|gb|EIA79083.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1948]
gi|380557269|gb|EIA80487.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1957]
gi|380561246|gb|EIA84194.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 202/04]
gi|380562376|gb|EIA85247.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 1961]
gi|380567874|gb|EIA90368.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 37/05]
gi|380571582|gb|EIA93960.1| putative inner membrane protein translocase component YidC
[Campylobacter coli LMG 9854]
gi|380578286|gb|EIB00144.1| putative inner membrane protein translocase component YidC
[Campylobacter coli 151-9]
gi|380586606|gb|EIB07893.1| putative inner membrane protein translocase component YidC
[Campylobacter coli LMG 9860]
gi|380591060|gb|EIB12057.1| membrane protein insertase [Campylobacter coli H8]
Length = 531
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 124/253 (49%), Gaps = 41/253 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + + +G+AI+++ +I++ FPLT K + S ++
Sbjct: 318 WFTFIAKPMFEFLNFLHNHIGN------WGWAIVIMVLIIRIILFPLTYKSMISMNKLKD 371
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K ++ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 372 LAPKMKELRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 430
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L S Y +LP+L+ V+
Sbjct: 431 ELKAAPWAFWIHDL------------------------------SVMDPYFILPILMGVT 460
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
+I ++I DP M++ + FLP++ +F ++ P+GL+LYWF NNL S QQ
Sbjct: 461 MFIQ-QLITPMTIQDP-MQAK--IMKFLPIIFTFFFITFPAGLTLYWFVNNLCSLVQQWV 516
Query: 333 LQKFGGAKDPMKQ 345
+ K + KQ
Sbjct: 517 INKMFAKEHHKKQ 529
>gi|398784329|ref|ZP_10547593.1| inner membrane protein translocase component YidC [Streptomyces
auratus AGR0001]
gi|396995252|gb|EJJ06270.1| inner membrane protein translocase component YidC [Streptomyces
auratus AGR0001]
Length = 383
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 173/367 (47%), Gaps = 62/367 (16%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
A+G +I+ L V+++ PL KQ++S+ M++L P++KAIQERY D++R E +LY
Sbjct: 34 AWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQALQPKMKAIQERYKSDKQRQSEEMMKLY 93
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADE---GLLTEGFFWIPSLAGPTTIAARQ 236
K G NPL+ CLP LA P +I LY+ LS++A G++ + A +
Sbjct: 94 KETGTNPLSSCLPILAQSPFFISLYQVLSHIAQNKTVGVIDQSLL---------ESAQKA 144
Query: 237 NGSGISWLFPFVDGHPP---LGWSDT---FAYLVLPVLLVVSQYISVKIIQSSQNND--- 287
+ G F+D LG S T +++ VL+ SQ+ + + + ++N D
Sbjct: 145 HIFGAPLAAKFMDSAAKIESLGASVTNVRVVTIIMIVLMSASQFYTQRQLM-TKNVDLTV 203
Query: 288 --PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPM-- 343
P M+ + L P+M F ++ P G+ +YW T N+ + QQ+++ + ++P
Sbjct: 204 KTPFMQQQKMLMYVFPIMFAVFGINFPVGVLVYWLTTNVWTMGQQMFVIR----RNPTPG 259
Query: 344 -KQFSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRRQQR 402
K F++ + ERL R A KL + P E + +EAR+ +Q+
Sbjct: 260 SKAFAE--RQERL----------------RAAGKLVED---PAEVAAKQAAEEARQHRQQ 298
Query: 403 EEEKRKA------AEAAAKGNQTINGEQER--EASILGSAKGV--QTDLVDKDDENFPSV 452
+ + KA A A N+T G R +A GS +G + L KD +
Sbjct: 299 PKRQTKAKRQTGGAPAGGAQNRTRAGSAARDTDADTAGSGQGAGKKQSLEKKDAQGGKEK 358
Query: 453 TGDNASN 459
G + S
Sbjct: 359 GGASGSR 365
>gi|305432097|ref|ZP_07401264.1| inner membrane protein [Campylobacter coli JV20]
gi|419595811|ref|ZP_14130903.1| putative inner membrane protein translocase component YidC
[Campylobacter coli LMG 23336]
gi|419601125|ref|ZP_14135852.1| putative inner membrane protein translocase component YidC
[Campylobacter coli LMG 23344]
gi|419613129|ref|ZP_14146985.1| membrane protein insertase [Campylobacter coli H9]
gi|304445181|gb|EFM37827.1| inner membrane protein [Campylobacter coli JV20]
gi|380572834|gb|EIA95012.1| putative inner membrane protein translocase component YidC
[Campylobacter coli LMG 23336]
gi|380582159|gb|EIB03846.1| putative inner membrane protein translocase component YidC
[Campylobacter coli LMG 23344]
gi|380588555|gb|EIB09667.1| membrane protein insertase [Campylobacter coli H9]
Length = 531
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 124/253 (49%), Gaps = 41/253 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + + +G+AI+++ +I++ FPLT K + S ++
Sbjct: 318 WFTFIAKPMFEFLNFLHNHIGN------WGWAIVIMVLIIRIILFPLTYKSMISMNKLKD 371
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K ++ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 372 LAPKMKELRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 430
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L S Y +LP+L+ V+
Sbjct: 431 ELKAAPWAFWIHDL------------------------------SVMDPYFILPILMGVT 460
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
+I ++I DP M++ + FLP++ +F ++ P+GL+LYWF NNL S QQ
Sbjct: 461 MFIQ-QLITPMTIQDP-MQAK--IMKFLPIIFTFFFITFPAGLTLYWFVNNLCSLVQQWV 516
Query: 333 LQKFGGAKDPMKQ 345
+ K + KQ
Sbjct: 517 INKMFAKEHHKKQ 529
>gi|384423365|ref|YP_005632723.1| Inner membrane protein translocase component YidC, long form
[Vibrio cholerae LMA3984-4]
gi|327482918|gb|AEA77325.1| Inner membrane protein translocase component YidC, long form
[Vibrio cholerae LMA3984-4]
Length = 541
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 122/261 (46%), Gaps = 49/261 (18%)
Query: 82 DAVTTTKQNSD------WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAA 135
D + T N D WL I + +L V++ + +G AII LT IV+ A
Sbjct: 313 DQMAATAPNLDLVVDYGWLWFIAKPLHWLLSVIQTFVGN------WGVAIICLTFIVRGA 366
Query: 136 TFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLA 195
+PLTK Q S MR L P+++A++ER D++R+ E LYK +NPL GCLP L
Sbjct: 367 MYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILL 426
Query: 196 TIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPL 254
+P++I LY AL + L FF WI L+
Sbjct: 427 QMPIFIALYWALMESVE--LRHSPFFGWIHDLSAQD------------------------ 460
Query: 255 GWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSG 314
Y +LP+L+ S ++ ++ + + DP Q + F+P+M +F L PSG
Sbjct: 461 ------PYYILPLLMGASMFV-IQKMSPTTITDP---MQQKIMTFMPVMFTFFFLWFPSG 510
Query: 315 LSLYWFTNNLLSTAQQVWLQK 335
L LYW +N+++ QQ + K
Sbjct: 511 LVLYWLVSNIVTLIQQTLIYK 531
>gi|15640036|ref|NP_062588.1| inner membrane protein translocase component YidC [Vibrio cholerae
O1 biovar El Tor str. N16961]
gi|121591471|ref|ZP_01678744.1| inner membrane protein, 60 kDa [Vibrio cholerae 2740-80]
gi|147674272|ref|YP_001218407.1| inner membrane protein translocase component YidC [Vibrio cholerae
O395]
gi|153212974|ref|ZP_01948568.1| inner membrane protein, 60 kDa [Vibrio cholerae 1587]
gi|153821953|ref|ZP_01974620.1| inner membrane protein, 60 kDa [Vibrio cholerae B33]
gi|227080241|ref|YP_002808792.1| putative inner membrane protein translocase component YidC [Vibrio
cholerae M66-2]
gi|227116543|ref|YP_002818439.1| putative Inner membrane protein [Vibrio cholerae O395]
gi|229508291|ref|ZP_04397795.1| OxaI/YidC membrane insertion protein [Vibrio cholerae BX 330286]
gi|229508870|ref|ZP_04398361.1| OxaI/YidC membrane insertion protein [Vibrio cholerae B33]
gi|229606565|ref|YP_002877213.1| inner membrane protein translocase component YidC [Vibrio cholerae
MJ-1236]
gi|254851570|ref|ZP_05240920.1| inner membrane protein oxaA [Vibrio cholerae MO10]
gi|255746812|ref|ZP_05420758.1| OxaI/YidC membrane insertion protein [Vibrio cholera CIRS 101]
gi|262155892|ref|ZP_06029014.1| OxaI/YidC membrane insertion protein [Vibrio cholerae INDRE 91/1]
gi|262167094|ref|ZP_06034809.1| OxaI/YidC membrane insertion protein [Vibrio cholerae RC27]
gi|298501190|ref|ZP_07010989.1| inner membrane protein [Vibrio cholerae MAK 757]
gi|360036771|ref|YP_004938534.1| hypothetical protein Vch1786_I2407 [Vibrio cholerae O1 str.
2010EL-1786]
gi|379739911|ref|YP_005331880.1| membrane protein insertase [Vibrio cholerae IEC224]
gi|417811087|ref|ZP_12457755.1| inner membrane protein oxaA [Vibrio cholerae HC-49A2]
gi|417814839|ref|ZP_12461483.1| inner membrane protein oxaA [Vibrio cholerae HCUF01]
gi|417818606|ref|ZP_12465228.1| inner membrane protein oxaA [Vibrio cholerae HE39]
gi|418330716|ref|ZP_12941683.1| inner membrane protein oxaA [Vibrio cholerae HC-06A1]
gi|418339179|ref|ZP_12948071.1| inner membrane protein oxaA [Vibrio cholerae HC-23A1]
gi|418342249|ref|ZP_12949070.1| inner membrane protein oxaA [Vibrio cholerae HC-28A1]
gi|418347430|ref|ZP_12952172.1| inner membrane protein oxaA [Vibrio cholerae HC-43A1]
gi|418356634|ref|ZP_12959350.1| inner membrane protein oxaA [Vibrio cholerae HC-61A1]
gi|419824480|ref|ZP_14347993.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
CP1033(6)]
gi|419827709|ref|ZP_14351204.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-1A2]
gi|419831332|ref|ZP_14354807.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-61A2]
gi|421315259|ref|ZP_15765835.1| inner membrane protein oxaA [Vibrio cholerae CP1032(5)]
gi|421318807|ref|ZP_15769371.1| inner membrane protein oxaA [Vibrio cholerae CP1038(11)]
gi|421322860|ref|ZP_15773395.1| inner membrane protein oxaA [Vibrio cholerae CP1041(14)]
gi|421326312|ref|ZP_15776833.1| inner membrane protein oxaA [Vibrio cholerae CP1042(15)]
gi|421330237|ref|ZP_15780725.1| inner membrane protein oxaA [Vibrio cholerae CP1046(19)]
gi|421333929|ref|ZP_15784403.1| inner membrane protein oxaA [Vibrio cholerae CP1048(21)]
gi|421337745|ref|ZP_15788189.1| inner membrane protein oxaA [Vibrio cholerae HC-20A2]
gi|421345265|ref|ZP_15795655.1| inner membrane protein oxaA [Vibrio cholerae HC-46A1]
gi|421348886|ref|ZP_15799257.1| inner membrane protein oxaA [Vibrio cholerae HE-25]
gi|422890031|ref|ZP_16932490.1| inner membrane protein oxaA [Vibrio cholerae HC-40A1]
gi|422900603|ref|ZP_16936239.1| inner membrane protein oxaA [Vibrio cholerae HC-48A1]
gi|422905001|ref|ZP_16939887.1| inner membrane protein oxaA [Vibrio cholerae HC-70A1]
gi|422911749|ref|ZP_16946298.1| inner membrane protein oxaA [Vibrio cholerae HFU-02]
gi|422915736|ref|ZP_16950101.1| inner membrane protein oxaA [Vibrio cholerae HC-02A1]
gi|422924215|ref|ZP_16957284.1| inner membrane protein oxaA [Vibrio cholerae HC-38A1]
gi|423143281|ref|ZP_17130915.1| inner membrane protein oxaA [Vibrio cholerae HC-19A1]
gi|423148261|ref|ZP_17135638.1| inner membrane protein oxaA [Vibrio cholerae HC-21A1]
gi|423152050|ref|ZP_17139280.1| inner membrane protein oxaA [Vibrio cholerae HC-22A1]
gi|423154841|ref|ZP_17141992.1| inner membrane protein oxaA [Vibrio cholerae HC-32A1]
gi|423158705|ref|ZP_17145691.1| inner membrane protein oxaA [Vibrio cholerae HC-33A2]
gi|423163368|ref|ZP_17150183.1| inner membrane protein oxaA [Vibrio cholerae HC-48B2]
gi|423729371|ref|ZP_17702721.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-17A1]
gi|423810644|ref|ZP_17714690.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-55C2]
gi|423844882|ref|ZP_17718428.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-59A1]
gi|423876914|ref|ZP_17722095.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-60A1]
gi|423887676|ref|ZP_17724938.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-62A1]
gi|423920146|ref|ZP_17729551.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-77A1]
gi|423961696|ref|ZP_17735802.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HE-40]
gi|423986053|ref|ZP_17739358.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HE-46]
gi|423994669|ref|ZP_17739433.1| inner membrane protein oxaA [Vibrio cholerae HC-02C1]
gi|424000551|ref|ZP_17743660.1| inner membrane protein oxaA [Vibrio cholerae HC-17A2]
gi|424007527|ref|ZP_17750491.1| inner membrane protein oxaA [Vibrio cholerae HC-37A1]
gi|424011951|ref|ZP_17754716.1| inner membrane protein oxaA [Vibrio cholerae HC-55B2]
gi|424017963|ref|ZP_17757781.1| inner membrane protein oxaA [Vibrio cholerae HC-59B1]
gi|424022514|ref|ZP_17762196.1| inner membrane protein oxaA [Vibrio cholerae HC-62B1]
gi|424025533|ref|ZP_17765169.1| inner membrane protein oxaA [Vibrio cholerae HC-69A1]
gi|424584905|ref|ZP_18024516.1| inner membrane protein oxaA [Vibrio cholerae CP1030(3)]
gi|424593531|ref|ZP_18032889.1| inner membrane protein oxaA [Vibrio cholerae CP1040(13)]
gi|424597460|ref|ZP_18036676.1| inner membrane protein oxaA [Vibrio Cholerae CP1044(17)]
gi|424600237|ref|ZP_18039410.1| inner membrane protein oxaA [Vibrio cholerae CP1047(20)]
gi|424605136|ref|ZP_18044122.1| inner membrane protein oxaA [Vibrio cholerae CP1050(23)]
gi|424608862|ref|ZP_18047739.1| inner membrane protein oxaA [Vibrio cholerae HC-39A1]
gi|424611767|ref|ZP_18050594.1| inner membrane protein oxaA [Vibrio cholerae HC-41A1]
gi|424615658|ref|ZP_18054368.1| inner membrane protein oxaA [Vibrio cholerae HC-42A1]
gi|424620404|ref|ZP_18058951.1| inner membrane protein oxaA [Vibrio cholerae HC-47A1]
gi|424623344|ref|ZP_18061836.1| inner membrane protein oxaA [Vibrio cholerae HC-50A1]
gi|424627913|ref|ZP_18066240.1| inner membrane protein oxaA [Vibrio cholerae HC-51A1]
gi|424631861|ref|ZP_18069999.1| inner membrane protein oxaA [Vibrio cholerae HC-52A1]
gi|424634950|ref|ZP_18072986.1| inner membrane protein oxaA [Vibrio cholerae HC-55A1]
gi|424638775|ref|ZP_18076687.1| inner membrane protein oxaA [Vibrio cholerae HC-56A1]
gi|424643225|ref|ZP_18081000.1| inner membrane protein oxaA [Vibrio cholerae HC-56A2]
gi|424647029|ref|ZP_18084723.1| inner membrane protein oxaA [Vibrio cholerae HC-57A1]
gi|424651156|ref|ZP_18088697.1| inner membrane protein oxaA [Vibrio cholerae HC-57A2]
gi|424655109|ref|ZP_18092426.1| inner membrane protein oxaA [Vibrio cholerae HC-81A2]
gi|440712070|ref|ZP_20892696.1| OxaI/YidC membrane insertion protein [Vibrio cholerae 4260B]
gi|443502062|ref|ZP_21069071.1| inner membrane protein oxaA [Vibrio cholerae HC-64A1]
gi|443505961|ref|ZP_21072777.1| inner membrane protein oxaA [Vibrio cholerae HC-65A1]
gi|443509799|ref|ZP_21076490.1| inner membrane protein oxaA [Vibrio cholerae HC-67A1]
gi|443513639|ref|ZP_21080201.1| inner membrane protein oxaA [Vibrio cholerae HC-68A1]
gi|443517447|ref|ZP_21083890.1| inner membrane protein oxaA [Vibrio cholerae HC-71A1]
gi|443522033|ref|ZP_21088300.1| inner membrane protein oxaA [Vibrio cholerae HC-72A2]
gi|443525901|ref|ZP_21092008.1| inner membrane protein oxaA [Vibrio cholerae HC-78A1]
gi|443528967|ref|ZP_21094990.1| inner membrane protein oxaA [Vibrio cholerae HC-7A1]
gi|443536492|ref|ZP_21102354.1| inner membrane protein oxaA [Vibrio cholerae HC-80A1]
gi|443536530|ref|ZP_21102390.1| inner membrane protein oxaA [Vibrio cholerae HC-81A1]
gi|449054680|ref|ZP_21733348.1| Inner membrane protein translocase component YidC [Vibrio cholerae
O1 str. Inaba G4222]
gi|38503195|sp|Q9KVY4.1|YIDC_VIBCH RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|172047497|sp|A5F484.1|YIDC_VIBC3 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|254778170|sp|C3LP77.1|YIDC_VIBCM RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|9654395|gb|AAF93182.1| inner membrane protein, 60 kDa [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121546673|gb|EAX56855.1| inner membrane protein, 60 kDa [Vibrio cholerae 2740-80]
gi|124116200|gb|EAY35020.1| inner membrane protein, 60 kDa [Vibrio cholerae 1587]
gi|126520492|gb|EAZ77715.1| inner membrane protein, 60 kDa [Vibrio cholerae B33]
gi|146316155|gb|ABQ20694.1| inner membrane protein, 60 kDa [Vibrio cholerae O395]
gi|227008129|gb|ACP04341.1| putative Inner membrane protein [Vibrio cholerae M66-2]
gi|227011993|gb|ACP08203.1| putative Inner membrane protein [Vibrio cholerae O395]
gi|229354145|gb|EEO19077.1| OxaI/YidC membrane insertion protein [Vibrio cholerae B33]
gi|229354564|gb|EEO19486.1| OxaI/YidC membrane insertion protein [Vibrio cholerae BX 330286]
gi|229369220|gb|ACQ59643.1| OxaI/YidC membrane insertion protein [Vibrio cholerae MJ-1236]
gi|254847275|gb|EET25689.1| inner membrane protein oxaA [Vibrio cholerae MO10]
gi|255735569|gb|EET90968.1| OxaI/YidC membrane insertion protein [Vibrio cholera CIRS 101]
gi|262024480|gb|EEY43166.1| OxaI/YidC membrane insertion protein [Vibrio cholerae RC27]
gi|262030344|gb|EEY48986.1| OxaI/YidC membrane insertion protein [Vibrio cholerae INDRE 91/1]
gi|297540062|gb|EFH76124.1| inner membrane protein [Vibrio cholerae MAK 757]
gi|340044214|gb|EGR05167.1| inner membrane protein oxaA [Vibrio cholerae HE39]
gi|340046011|gb|EGR06946.1| inner membrane protein oxaA [Vibrio cholerae HCUF01]
gi|340046197|gb|EGR07128.1| inner membrane protein oxaA [Vibrio cholerae HC-49A2]
gi|341627209|gb|EGS52533.1| inner membrane protein oxaA [Vibrio cholerae HC-70A1]
gi|341628613|gb|EGS53838.1| inner membrane protein oxaA [Vibrio cholerae HC-48A1]
gi|341628899|gb|EGS54087.1| inner membrane protein oxaA [Vibrio cholerae HC-40A1]
gi|341642097|gb|EGS66584.1| inner membrane protein oxaA [Vibrio cholerae HC-02A1]
gi|341642172|gb|EGS66657.1| inner membrane protein oxaA [Vibrio cholerae HFU-02]
gi|341649404|gb|EGS73381.1| inner membrane protein oxaA [Vibrio cholerae HC-38A1]
gi|356423350|gb|EHH76802.1| inner membrane protein oxaA [Vibrio cholerae HC-06A1]
gi|356424006|gb|EHH77428.1| inner membrane protein oxaA [Vibrio cholerae HC-21A1]
gi|356428047|gb|EHH81277.1| inner membrane protein oxaA [Vibrio cholerae HC-19A1]
gi|356428732|gb|EHH81953.1| inner membrane protein oxaA [Vibrio cholerae HC-23A1]
gi|356436199|gb|EHH89319.1| inner membrane protein oxaA [Vibrio cholerae HC-22A1]
gi|356439148|gb|EHH92137.1| inner membrane protein oxaA [Vibrio cholerae HC-28A1]
gi|356446870|gb|EHH99661.1| inner membrane protein oxaA [Vibrio cholerae HC-32A1]
gi|356448862|gb|EHI01623.1| inner membrane protein oxaA [Vibrio cholerae HC-43A1]
gi|356450806|gb|EHI03516.1| inner membrane protein oxaA [Vibrio cholerae HC-61A1]
gi|356451432|gb|EHI04117.1| inner membrane protein oxaA [Vibrio cholerae HC-33A2]
gi|356456882|gb|EHI09459.1| inner membrane protein oxaA [Vibrio cholerae HC-48B2]
gi|356647925|gb|AET27980.1| conserved hypothetical protein [Vibrio cholerae O1 str.
2010EL-1786]
gi|378793421|gb|AFC56892.1| membrane protein insertase [Vibrio cholerae IEC224]
gi|395924223|gb|EJH35029.1| inner membrane protein oxaA [Vibrio cholerae CP1032(5)]
gi|395925444|gb|EJH36242.1| inner membrane protein oxaA [Vibrio cholerae CP1041(14)]
gi|395926560|gb|EJH37338.1| inner membrane protein oxaA [Vibrio cholerae CP1038(11)]
gi|395936036|gb|EJH46766.1| inner membrane protein oxaA [Vibrio cholerae CP1042(15)]
gi|395936412|gb|EJH47136.1| inner membrane protein oxaA [Vibrio cholerae CP1046(19)]
gi|395938292|gb|EJH48986.1| inner membrane protein oxaA [Vibrio cholerae CP1048(21)]
gi|395948283|gb|EJH58934.1| inner membrane protein oxaA [Vibrio cholerae HC-20A2]
gi|395948875|gb|EJH59510.1| inner membrane protein oxaA [Vibrio cholerae HC-46A1]
gi|395957079|gb|EJH67664.1| inner membrane protein oxaA [Vibrio cholerae HE-25]
gi|395965473|gb|EJH75642.1| inner membrane protein oxaA [Vibrio cholerae HC-56A2]
gi|395965622|gb|EJH75785.1| inner membrane protein oxaA [Vibrio cholerae HC-57A2]
gi|395967929|gb|EJH77953.1| inner membrane protein oxaA [Vibrio cholerae HC-42A1]
gi|395977676|gb|EJH87080.1| inner membrane protein oxaA [Vibrio cholerae HC-47A1]
gi|395979787|gb|EJH89112.1| inner membrane protein oxaA [Vibrio cholerae CP1030(3)]
gi|395980191|gb|EJH89480.1| inner membrane protein oxaA [Vibrio cholerae CP1047(20)]
gi|408011488|gb|EKG49298.1| inner membrane protein oxaA [Vibrio cholerae HC-39A1]
gi|408017771|gb|EKG55253.1| inner membrane protein oxaA [Vibrio cholerae HC-50A1]
gi|408018668|gb|EKG56101.1| inner membrane protein oxaA [Vibrio cholerae HC-41A1]
gi|408023486|gb|EKG60648.1| inner membrane protein oxaA [Vibrio cholerae HC-52A1]
gi|408028488|gb|EKG65378.1| inner membrane protein oxaA [Vibrio cholerae HC-56A1]
gi|408028747|gb|EKG65609.1| inner membrane protein oxaA [Vibrio cholerae HC-55A1]
gi|408038743|gb|EKG75070.1| inner membrane protein oxaA [Vibrio cholerae HC-57A1]
gi|408038990|gb|EKG75299.1| inner membrane protein oxaA [Vibrio cholerae CP1040(13)]
gi|408046104|gb|EKG81820.1| inner membrane protein oxaA [Vibrio Cholerae CP1044(17)]
gi|408047875|gb|EKG83372.1| inner membrane protein oxaA [Vibrio cholerae CP1050(23)]
gi|408058358|gb|EKG93161.1| inner membrane protein oxaA [Vibrio cholerae HC-81A2]
gi|408060077|gb|EKG94792.1| inner membrane protein oxaA [Vibrio cholerae HC-51A1]
gi|408613010|gb|EKK86341.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
CP1033(6)]
gi|408624720|gb|EKK97658.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-1A2]
gi|408629181|gb|EKL01890.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-17A1]
gi|408637474|gb|EKL09522.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-55C2]
gi|408645357|gb|EKL17012.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-60A1]
gi|408646456|gb|EKL18056.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-59A1]
gi|408652829|gb|EKL24020.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-61A2]
gi|408654862|gb|EKL25989.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HE-40]
gi|408661052|gb|EKL32046.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-77A1]
gi|408661808|gb|EKL32787.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HC-62A1]
gi|408662841|gb|EKL33746.1| membrane protein insertase, YidC/Oxa1 family [Vibrio cholerae
HE-46]
gi|408843791|gb|EKL83941.1| inner membrane protein oxaA [Vibrio cholerae HC-37A1]
gi|408850918|gb|EKL90859.1| inner membrane protein oxaA [Vibrio cholerae HC-17A2]
gi|408855747|gb|EKL95443.1| inner membrane protein oxaA [Vibrio cholerae HC-02C1]
gi|408863166|gb|EKM02658.1| inner membrane protein oxaA [Vibrio cholerae HC-55B2]
gi|408871774|gb|EKM11002.1| inner membrane protein oxaA [Vibrio cholerae HC-59B1]
gi|408876563|gb|EKM15676.1| inner membrane protein oxaA [Vibrio cholerae HC-62B1]
gi|408882521|gb|EKM21336.1| inner membrane protein oxaA [Vibrio cholerae HC-69A1]
gi|439972315|gb|ELP48610.1| OxaI/YidC membrane insertion protein [Vibrio cholerae 4260B]
gi|443433545|gb|ELS76046.1| inner membrane protein oxaA [Vibrio cholerae HC-64A1]
gi|443437374|gb|ELS83465.1| inner membrane protein oxaA [Vibrio cholerae HC-65A1]
gi|443441214|gb|ELS90876.1| inner membrane protein oxaA [Vibrio cholerae HC-67A1]
gi|443445030|gb|ELS98281.1| inner membrane protein oxaA [Vibrio cholerae HC-68A1]
gi|443448864|gb|ELT05473.1| inner membrane protein oxaA [Vibrio cholerae HC-71A1]
gi|443451926|gb|ELT12163.1| inner membrane protein oxaA [Vibrio cholerae HC-72A2]
gi|443455709|gb|ELT19469.1| inner membrane protein oxaA [Vibrio cholerae HC-78A1]
gi|443460230|gb|ELT27618.1| inner membrane protein oxaA [Vibrio cholerae HC-7A1]
gi|443460347|gb|ELT31436.1| inner membrane protein oxaA [Vibrio cholerae HC-80A1]
gi|443467777|gb|ELT42431.1| inner membrane protein oxaA [Vibrio cholerae HC-81A1]
gi|448265826|gb|EMB03059.1| Inner membrane protein translocase component YidC [Vibrio cholerae
O1 str. Inaba G4222]
Length = 541
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 122/261 (46%), Gaps = 49/261 (18%)
Query: 82 DAVTTTKQNSD------WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAA 135
D + T N D WL I + +L V++ + +G AII LT IV+ A
Sbjct: 313 DQMAATAPNLDLVVDYGWLWFIAKPLHWLLSVIQTFVGN------WGVAIICLTFIVRGA 366
Query: 136 TFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLA 195
+PLTK Q S MR L P+++A++ER D++R+ E LYK +NPL GCLP L
Sbjct: 367 MYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILL 426
Query: 196 TIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPL 254
+P++I LY AL + L FF WI L+
Sbjct: 427 QMPIFIALYWALMESVE--LRHSPFFGWIHDLSAQD------------------------ 460
Query: 255 GWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSG 314
Y +LP+L+ S ++ ++ + + DP Q + F+P+M +F L PSG
Sbjct: 461 ------PYYILPLLMGASMFV-IQKMSPTTITDP---MQQKIMTFMPVMFTFFFLWFPSG 510
Query: 315 LSLYWFTNNLLSTAQQVWLQK 335
L LYW +N+++ QQ + K
Sbjct: 511 LVLYWLVSNIVTLIQQTLIYK 531
>gi|217977385|ref|YP_002361532.1| 60 kDa inner membrane insertion protein [Methylocella silvestris
BL2]
gi|254773006|sp|B8EPG5.1|YIDC_METSB RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|217502761|gb|ACK50170.1| 60 kDa inner membrane insertion protein [Methylocella silvestris
BL2]
Length = 600
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 117/230 (50%), Gaps = 15/230 (6%)
Query: 115 LHVPYA----YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQER 170
LH Y+ +G AI+L TVIVK FPL K S M+++AP++ A++E+Y D+ +
Sbjct: 365 LHFLYSLTGNFGVAILLATVIVKGLFFPLANKSYLSMAKMKAVAPEIAALREKYPEDKMK 424
Query: 171 IQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPT 230
Q ET LYK INP++GCLP L IPV+ LY+ L V E F WI L+ P
Sbjct: 425 QQQETMALYKREKINPVSGCLPMLIQIPVFFALYKVLF-VTIEMRHAPFFGWIHDLSAPD 483
Query: 231 TIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNM 290
N + L PF PL A V P+L+ VS ++ +K N +P
Sbjct: 484 P----TNLFNLFGLLPFDPTQLPL-IGHFLAIGVWPLLMGVSMFVQMK-----ANPEPAD 533
Query: 291 KSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+ + ++P++ + P GL +YW NN+LS +QQ + K G K
Sbjct: 534 PMQKQIFTWMPVIFTFTLGGFPVGLVIYWTWNNILSVSQQTLIMKRAGVK 583
>gi|225549578|ref|ZP_03770544.1| inner membrane protein OxaA [Borrelia burgdorferi 118a]
gi|225369855|gb|EEG99302.1| inner membrane protein OxaA [Borrelia burgdorferi 118a]
Length = 544
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 119/235 (50%), Gaps = 24/235 (10%)
Query: 101 METVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAI 160
M+ V++V D M +G +II LT++V+ FPLT K ++ + L P++K +
Sbjct: 329 MQMVMQVFYDVMPN------WGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKEL 382
Query: 161 QERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF 220
Q ++ D +++ E RLYK G+NPL GCLP + +P++ LY ++N+ L G
Sbjct: 383 QAKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNL----FLLRGA 438
Query: 221 FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII 280
+IP +I G F + W+D +LP +++ +Q S I
Sbjct: 439 SFIPGWIDDLSIGDSVYHFGYKLYF--------VSWTDI---RILPFIMMFTQLGST--I 485
Query: 281 QSSQNNDPNMKSSQALTNF-LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
SS + N+ + Q F +P+M + ++PSGL +YW T N+ + QQ +++
Sbjct: 486 VSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIK 540
>gi|15612408|ref|NP_224061.1| inner membrane protein translocase component YidC [Helicobacter
pylori J99]
gi|38503266|sp|Q9ZJG8.1|YIDC_HELPJ RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|4155955|gb|AAD06920.1| putative Inner membrane protein [Helicobacter pylori J99]
Length = 549
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 355 WGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 414
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 415 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLS------------- 460
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 461 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 499
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW T+N+LS QQ+ + K
Sbjct: 500 PLLFTIFLITFPAGLVLYWTTHNILSVLQQLIINK 534
>gi|419623405|ref|ZP_14156533.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23218]
gi|419630066|ref|ZP_14162772.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 60004]
gi|419637547|ref|ZP_14169710.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 9879]
gi|419639128|ref|ZP_14171165.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 86605]
gi|380600927|gb|EIB21250.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23218]
gi|380606367|gb|EIB26282.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 60004]
gi|380615151|gb|EIB34432.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 9879]
gi|380617129|gb|EIB36311.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 86605]
Length = 530
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 123/253 (48%), Gaps = 41/253 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + +G+AI+++T+IV+ FPLT K + S ++
Sbjct: 314 WFTFIAKPMFEFLNFLHQYIGN------WGWAIVVMTLIVRIILFPLTYKSMISMNKLKD 367
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K I+ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 368 LAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 426
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L S Y +LP+L+ +
Sbjct: 427 ELKAAPWAFWIHDL------------------------------SVMDPYFILPILMGAT 456
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ ++I DP M++ + FLP++ +F ++ P+GL+LYWF NNL S QQ
Sbjct: 457 MFLQ-QLITPMTIQDP-MQAK--IMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQWV 512
Query: 333 LQKFGGAKDPMKQ 345
+ K + KQ
Sbjct: 513 INKIFAKEHHKKQ 525
>gi|406891007|gb|EKD36747.1| hypothetical protein ACD_75C01388G0002 [uncultured bacterium]
Length = 501
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 119/249 (47%), Gaps = 36/249 (14%)
Query: 90 NSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMA 149
N W I +L +L D YG AIIL+TV+ KAA +P+++K ++S
Sbjct: 277 NFGWFDVIAKPTLWLLNLLYDYCRN------YGIAIILVTVLFKAAFWPISQKGMKSMKN 330
Query: 150 MRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSN 209
M+ L P++ I+E+Y D R+ E LYK +NPL GCLP + IPV+ LY+ L
Sbjct: 331 MQKLQPKMVKIKEKYKSDPTRMNQEVMSLYKTYKVNPLGGCLPMVLQIPVFFALYKVLLQ 390
Query: 210 VADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWL---FPFVDGHPPLGWSDTFAYLVLP 266
+ E WI L+ P + WL P++ G P VL
Sbjct: 391 -SIELRHAPFMLWISDLSAPDRL----------WLGIDIPYLGGLP-----------VLT 428
Query: 267 VLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLS 326
+L+ S + K+ S DP + + FLP++ + L+ SGL LYWF NNLLS
Sbjct: 429 LLMGASMFFQQKL--SPTTADP---TQAKIMQFLPVIFTFMFLNFASGLVLYWFINNLLS 483
Query: 327 TAQQVWLQK 335
QQV + +
Sbjct: 484 ILQQVLINR 492
>gi|419642903|ref|ZP_14174677.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni ATCC 33560]
gi|380623657|gb|EIB42353.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni ATCC 33560]
Length = 530
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 41/253 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + +G+AI+++T+IV+ FPLT K + S ++
Sbjct: 314 WFTFIAKPMFEFLNFLHQYIGN------WGWAIVVMTLIVRIILFPLTYKSMISMNKLKD 367
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K I+ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 368 LAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 426
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L S Y +LP+L+ +
Sbjct: 427 ELKAAPWAFWIHDL------------------------------SVMDPYFILPILMGAT 456
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ ++I DP + FLP++ +F ++ P+GL+LYWF NNL S QQ
Sbjct: 457 MFLQ-QLITPMTIQDP---MQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQWV 512
Query: 333 LQKFGGAKDPMKQ 345
+ K + KQ
Sbjct: 513 INKIFAKEHHKKQ 525
>gi|257457349|ref|ZP_05622520.1| inner membrane protein OxaA [Treponema vincentii ATCC 35580]
gi|257445271|gb|EEV20343.1| inner membrane protein OxaA [Treponema vincentii ATCC 35580]
Length = 521
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 129/250 (51%), Gaps = 17/250 (6%)
Query: 95 SGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLA 154
SGI +E +LK L L +P +G +IIL+T+++K FPLTKK ES+ M+ +
Sbjct: 289 SGIWRPLEVLLKWLLQFFYKL-IP-NWGVSIILVTILIKVIFFPLTKKSSESTQQMQKMQ 346
Query: 155 PQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEG 214
P+++ +Q +Y G +++ E A+LYK AG NPL+GCLP L +P+ +YR +N +
Sbjct: 347 PKIQELQAKYKGKPQKLNEEMAKLYKEAGYNPLSGCLPLLIQLPILFAMYRLFNNYFEFR 406
Query: 215 LLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQY 274
WIP L+ +I F P LGW+D +LP++ V+SQ
Sbjct: 407 GAMFIPHWIPDLSVGDSILQ------------FPSPIPFLGWTDL---RILPIVYVISQM 451
Query: 275 ISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
+ KI Q+ ++ + + + +PL + + PSGL LYW N L QQ+ ++
Sbjct: 452 VFGKITQTPTSDQQQNNTMKIMMYGMPLFFFFMFYNAPSGLLLYWTCTNFLMLVQQMIIK 511
Query: 335 KFGGAKDPMK 344
K+ K
Sbjct: 512 AMMKKKEVRK 521
>gi|374308910|ref|YP_005055341.1| stage III sporulation protein J [Filifactor alocis ATCC 35896]
gi|291165949|gb|EFE27996.1| stage III sporulation protein J [Filifactor alocis ATCC 35896]
Length = 243
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 116/229 (50%), Gaps = 16/229 (6%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG AII T+IVK A PLT Q +S M M + P ++ IQ++Y D+++ T +LYK
Sbjct: 13 YGLAIIFFTIIVKLAMLPLTLSQNKSMMEMNKIQPLIQDIQKKYPKDKQKQAELTTQLYK 72
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTE--------GFFWIPSLAGPTTI 232
G+NP+ GCLP L +P+ L+RAL N + +E F W+ +L+ P I
Sbjct: 73 EHGVNPMMGCLPLLVQMPILFALFRALRNPVEYVFGSETLFQVADTSFLWLKNLSSPDII 132
Query: 233 AARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKS 292
G ++FP V + TF + +L + K + +Q +P
Sbjct: 133 TI--GGFAFPFIFPIVAA------AATFIDTKMTMLKNDKKKEKQKDGKQNQPENPGESM 184
Query: 293 SQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKD 341
+ + +PLMI ++ S P+GLS+YW + L S AQ+ +++ +K+
Sbjct: 185 QKTMLYMMPLMIFWWGRSFPAGLSIYWAVSTLFSIAQRKIVERISLSKE 233
>gi|331268192|ref|YP_004394684.1| membrane protein oxaA [Clostridium botulinum BKT015925]
gi|329124742|gb|AEB74687.1| Membrane protein oxaA [Clostridium botulinum BKT015925]
Length = 220
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 110/226 (48%), Gaps = 22/226 (9%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YG II+LT+I++ FPL KQ++S + M + P++K +QE+Y D +R Q E +LY
Sbjct: 16 SYGLTIIVLTLIIRIVLFPLNYKQIKSQVGMTEIQPELKKLQEKYKNDPQRQQQEMMKLY 75
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
K G+NPL GCLP L P+ I L+ +N++ PS+ T + +
Sbjct: 76 KEYGVNPLGGCLPLLVQWPILIALFYVFNNLSKIE---------PSIVNVTFLGVKLMEP 126
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
I P W +LP++ + Y S I+ S + +K ++ ++ F
Sbjct: 127 AIL---------KPEYWYT----WILPIVSALLTYFSTVIMTSKNADSAQVKQTKMMSGF 173
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQ 345
+ L + Y + P+ L LYW TN+L Q + Q+ K + Q
Sbjct: 174 MTLFVVYMSFKFPTALVLYWITNSLFQIGQTIITQRSQQKKKELIQ 219
>gi|419683507|ref|ZP_14212201.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1213]
gi|380658511|gb|EIB74522.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1213]
Length = 530
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 41/253 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + +G+AI+++T+IV+ FPLT K + S ++
Sbjct: 314 WFTFIAKPMFEFLNFLHQYIGN------WGWAIVVMTLIVRIILFPLTYKSMISMNKLKD 367
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K I+ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 368 LAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 426
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L S Y +LP+L+ +
Sbjct: 427 ELKAAPWAFWIHDL------------------------------SVMDPYFILPILMGAT 456
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ ++I DP + FLP++ +F ++ P+GL+LYWF NNL S QQ
Sbjct: 457 MFLQ-QLITPMTIQDP---MQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQWV 512
Query: 333 LQKFGGAKDPMKQ 345
+ K + KQ
Sbjct: 513 INKIFAKEHHKKQ 525
>gi|269129164|ref|YP_003302534.1| 60 kDa inner membrane insertion protein [Thermomonospora curvata
DSM 43183]
gi|268314122|gb|ACZ00497.1| 60 kDa inner membrane insertion protein [Thermomonospora curvata
DSM 43183]
Length = 351
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 131/252 (51%), Gaps = 20/252 (7%)
Query: 92 DWLSGITNVMETVLKVLKDGMSTLHVP---YAYGFAIILLTVIVKAATFPLTKKQVESSM 148
DWL ++ + ++ G+ T+ P A+ +IILLTV ++ FPL KQ+ +S
Sbjct: 3 DWL---YEIVAWFIVLIHKGLGTIVDPDSGLAWAGSIILLTVFLRLLMFPLFVKQIHASR 59
Query: 149 AMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALS 208
M+ L+PQ++A++++Y D++R+ E R+Y+ G NPLAGCLP L +PV+IGL++ L+
Sbjct: 60 KMQELSPQIQALRKKYKHDKQRLNQEVMRVYQENGANPLAGCLPLLVQMPVFIGLFQVLN 119
Query: 209 NV--ADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFP--FVDGHPPLGWSDTFAYLV 264
+ A EG G P I + Q+ + P F++ W V
Sbjct: 120 GISKAKEGESKYGI-------SPELIHSAQHADIFGAVIPDTFLNAWGDGAWDAVAVTAV 172
Query: 265 LPVLLVVSQYISVKIIQSSQ---NNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFT 321
++ + + +++ Q + D M ++Q + FL ++G F L P G+ LYW T
Sbjct: 173 AVLISSTTTFFTMRASMKRQPVMDPDNPMVAAQKMMVFLAPLLGLFGLGFPLGVLLYWMT 232
Query: 322 NNLLSTAQQVWL 333
+N + AQQ ++
Sbjct: 233 SNTWTLAQQHYI 244
>gi|90422337|ref|YP_530707.1| putative inner membrane protein translocase component YidC
[Rhodopseudomonas palustris BisB18]
gi|90104351|gb|ABD86388.1| protein translocase subunit yidC [Rhodopseudomonas palustris
BisB18]
Length = 632
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 123/251 (49%), Gaps = 23/251 (9%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W IT M L H+ +G AI+L+TVI+K PL K S M++
Sbjct: 381 WFYFITKPMFVALDFF------FHLVGNFGIAILLVTVIIKLLFLPLANKSYASMAKMKA 434
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
+ PQ+ A++ER+ D+ + Q E +Y+ INP+AGCLP L IPV+ LY+ L V
Sbjct: 435 IQPQLAALKERHPDDKAKQQQEMMEIYRKEKINPVAGCLPVLLQIPVFFSLYKVLF-VTI 493
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVL---PVLL 269
E + WI L+ P N + L F H P+ YLVL P+++
Sbjct: 494 EMRHAPFYGWIHDLSAPDP----TNLFNLFGLLAFDPTHVPV----IGHYLVLGAWPIVM 545
Query: 270 VVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
++ ++ +K+ N P + Q + ++PL+ + S P+GL +YW NNLLS Q
Sbjct: 546 GITMWVQMKL-----NPTPPDPTQQMIFAWMPLIFTFMLASFPAGLVIYWAWNNLLSVVQ 600
Query: 330 QVWLQKFGGAK 340
Q ++ + G K
Sbjct: 601 QGYIMRRNGVK 611
>gi|410629480|ref|ZP_11340180.1| inner membrane protein oxaA [Glaciecola arctica BSs20135]
gi|410150965|dbj|GAC17047.1| inner membrane protein oxaA [Glaciecola arctica BSs20135]
Length = 545
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 109/209 (52%), Gaps = 35/209 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+GF+IIL+T++VK A +PLTKKQ ES MR+L P++ A++ERY D++++Q +YK
Sbjct: 356 WGFSIILITIVVKGAMYPLTKKQYESMAKMRALKPKMDALKERYGDDKQKMQKAMMEMYK 415
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GC P L +P+++ LY L + E + FWI T ++A+
Sbjct: 416 KDKVNPMGGCFPLLLQMPIFLALYWVLLE-SVELRHADFIFWI------TDLSAKD---- 464
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
PF VLPVL +S Y+ K +Q DP Q + F+
Sbjct: 465 -----PF---------------FVLPVLTGLSMYLLQK-LQPMTMTDP---MQQKIMQFM 500
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
P+ + F P+GL LYW +N+++ Q
Sbjct: 501 PVAMSLFFFIFPAGLVLYWLISNIITLIQ 529
>gi|57237786|ref|YP_179034.1| inner membrane protein translocase component YidC [Campylobacter
jejuni RM1221]
gi|384443312|ref|YP_005659564.1| OxaI/YidC membrane insertion protein [Campylobacter jejuni subsp.
jejuni S3]
gi|419620291|ref|ZP_14153734.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 51494]
gi|419626880|ref|ZP_14159799.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23263]
gi|419633730|ref|ZP_14166157.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23269]
gi|419645142|ref|ZP_14176703.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni LMG
9081]
gi|419646150|ref|ZP_14177625.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 53161]
gi|419653642|ref|ZP_14184608.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 2008-872]
gi|419655024|ref|ZP_14185888.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 2008-988]
gi|419658648|ref|ZP_14189261.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1997-1]
gi|419664520|ref|ZP_14194658.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1997-4]
gi|419666001|ref|ZP_14196052.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni
1997-7]
gi|419667017|ref|ZP_14197001.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1997-10]
gi|419670968|ref|ZP_14200647.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1997-14]
gi|419672771|ref|ZP_14202258.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 51037]
gi|419678286|ref|ZP_14207347.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 87459]
gi|419686144|ref|ZP_14214583.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1798]
gi|419696308|ref|ZP_14224171.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23210]
gi|424846383|ref|ZP_18270978.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni NW]
gi|424849180|ref|ZP_18273645.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni
D2600]
gi|57166590|gb|AAW35369.1| inner membrane protein, 60 kDa [Campylobacter jejuni RM1221]
gi|315058399|gb|ADT72728.1| OxaI/YidC membrane insertion protein [Campylobacter jejuni subsp.
jejuni S3]
gi|356486026|gb|EHI16012.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni NW]
gi|356487549|gb|EHI17493.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni
D2600]
gi|380600728|gb|EIB21055.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 51494]
gi|380607717|gb|EIB27568.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23263]
gi|380611254|gb|EIB30810.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23269]
gi|380620857|gb|EIB39708.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni LMG
9081]
gi|380624149|gb|EIB42814.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 53161]
gi|380632308|gb|EIB50406.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 2008-872]
gi|380633128|gb|EIB51134.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1997-1]
gi|380637743|gb|EIB55354.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 2008-988]
gi|380640788|gb|EIB58230.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1997-4]
gi|380642097|gb|EIB59385.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni
1997-7]
gi|380646729|gb|EIB63680.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1997-10]
gi|380649974|gb|EIB66639.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1997-14]
gi|380655035|gb|EIB71368.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 51037]
gi|380661070|gb|EIB76991.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 87459]
gi|380665226|gb|EIB80803.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1798]
gi|380674728|gb|EIB89652.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23210]
Length = 530
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 41/253 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + +G+AI+++T+IV+ FPLT K + S ++
Sbjct: 314 WFTFIAKPMFEFLNFLHQYIGN------WGWAIVVMTLIVRIILFPLTYKSMISMNKLKD 367
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K I+ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 368 LAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 426
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L S Y +LP+L+ +
Sbjct: 427 ELKAAPWAFWIHDL------------------------------SVMDPYFILPILMGAT 456
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ ++I DP + FLP++ +F ++ P+GL+LYWF NNL S QQ
Sbjct: 457 MFLQ-QLITPMTIQDP---MQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQWV 512
Query: 333 LQKFGGAKDPMKQ 345
+ K + KQ
Sbjct: 513 INKIFAKEHHKKQ 525
>gi|419652478|ref|ZP_14183554.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 2008-894]
gi|419694835|ref|ZP_14222783.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 9872]
gi|380629272|gb|EIB47542.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 2008-894]
gi|380669198|gb|EIB84489.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 9872]
Length = 530
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 41/253 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + +G+AI+++T+IV+ FPLT K + S ++
Sbjct: 314 WFTFIAKPMFEFLNFLHQYIGN------WGWAIVVMTLIVRIILFPLTYKSMISMNKLKD 367
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K I+ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 368 LAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 426
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L S Y +LP+L+ +
Sbjct: 427 ELKAAPWAFWIHDL------------------------------SVMDPYFILPILMGAT 456
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ ++I DP + FLP++ +F ++ P+GL+LYWF NNL S QQ
Sbjct: 457 MFLQ-QLITPMTIQDP---MQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQWV 512
Query: 333 LQKFGGAKDPMKQ 345
+ K + KQ
Sbjct: 513 INKIFAKEHHKKQ 525
>gi|419659632|ref|ZP_14190155.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 2008-979]
gi|380639003|gb|EIB56519.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 2008-979]
Length = 530
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 41/253 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + +G+AI+++T+IV+ FPLT K + S ++
Sbjct: 314 WFTFIAKPMFEFLNFLHQYIGN------WGWAIVVMTLIVRIILFPLTYKSMISMNKLKD 367
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K I+ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 368 LAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 426
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L S Y +LP+L+ +
Sbjct: 427 ELKAAPWAFWIHDL------------------------------SVMDPYFILPILMGAT 456
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ ++I DP + FLP++ +F ++ P+GL+LYWF NNL S QQ
Sbjct: 457 MFLQ-QLITPMTIQDP---MQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQWV 512
Query: 333 LQKFGGAKDPMKQ 345
+ K + KQ
Sbjct: 513 INKIFAKEHHKKQ 525
>gi|419648482|ref|ZP_14179821.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 9217]
gi|380626311|gb|EIB44788.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 9217]
Length = 530
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 41/253 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + +G+AI+++T+IV+ FPLT K + S ++
Sbjct: 314 WFTFIAKPMFEFLNFLHQYIGN------WGWAIVVMTLIVRIILFPLTYKSMISMNKLKD 367
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K I+ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 368 LAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 426
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L S Y +LP+L+ +
Sbjct: 427 ELKAAPWAFWIHDL------------------------------SVMDPYFILPILMGAT 456
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ ++I DP + FLP++ +F ++ P+GL+LYWF NNL S QQ
Sbjct: 457 MFLQ-QLITPMTIQDP---MQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQWV 512
Query: 333 LQKFGGAKDPMKQ 345
+ K + KQ
Sbjct: 513 INKIFAKEHHKKQ 525
>gi|218885990|ref|YP_002435311.1| hypothetical protein DvMF_0888 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|259515682|sp|B8DP11.1|YIDC_DESVM RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|218756944|gb|ACL07843.1| 60 kDa inner membrane insertion protein [Desulfovibrio vulgaris
str. 'Miyazaki F']
Length = 539
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 109/215 (50%), Gaps = 28/215 (13%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG AIILLTV++K +PL+ K +S M+ L P ++ ++E++ D+E++ E RLYK
Sbjct: 351 YGVAIILLTVVIKLVFWPLSHKSYKSMEQMKKLQPMLQKLREKHGDDREKMNEEMMRLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP L IPV+ GLY+AL N + ++ S
Sbjct: 411 TYKVNPAGGCLPMLVQIPVFFGLYQALLNAIE----------------------LRHASF 448
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I+ L PF D S Y + P+++ + ++Q P + + F+
Sbjct: 449 ITHL-PFTDMVWLADLSAKDPYYITPIVMGATM-----LLQQKLTPAPGDPTQAKIMMFM 502
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++ + LS PSGL +YW NN+LS AQQ W+ +
Sbjct: 503 PVVFTFMFLSFPSGLVVYWLCNNVLSIAQQWWMLR 537
>gi|349574610|ref|ZP_08886550.1| inner membrane protein OxaA [Neisseria shayeganii 871]
gi|348013818|gb|EGY52722.1| inner membrane protein OxaA [Neisseria shayeganii 871]
Length = 544
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 107/222 (48%), Gaps = 37/222 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLTVIVKAA PLT S MR++AP+++ +++++ D+ +Q ++Y+
Sbjct: 357 WGWAIVLLTVIVKAALLPLTNASYRSMAKMRAVAPKLEMLKKQHGDDRMALQQAMMKMYR 416
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY L A L + WI LA P I
Sbjct: 417 DEKINPLGGCLPMLLQIPVFIGLYWVL--FASVELRQASWGWINDLARPDPI-------- 466
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
VLPVL+ V+ Y+ Q+ N P + +
Sbjct: 467 ----------------------FVLPVLMTVTMYV-----QTLLNPPPTDPMQAKMMKIM 499
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDP 342
PLM P+GL LY+ NNLL+ AQQ ++ K K P
Sbjct: 500 PLMFSVMFFFFPAGLVLYYVVNNLLTIAQQWFINKRYSKKYP 541
>gi|108563801|ref|YP_628117.1| putative inner membrane protein translocase component YidC
[Helicobacter pylori HPAG1]
gi|107837574|gb|ABF85443.1| 60 kDa inner-membrane protein [Helicobacter pylori HPAG1]
Length = 548
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ L+P++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELSPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|158321892|ref|YP_001514399.1| 60 kDa inner membrane insertion protein [Alkaliphilus oremlandii
OhILAs]
gi|158142091|gb|ABW20403.1| 60 kDa inner membrane insertion protein [Alkaliphilus oremlandii
OhILAs]
Length = 220
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 119/224 (53%), Gaps = 44/224 (19%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG +IIL T++ K T PLT KQ +S M+ + P++K +QE+Y D E++ ++T LYK
Sbjct: 22 YGLSIILFTIVTKLLTLPLTIKQNKSMKEMQEIQPKLKKLQEKYKNDPEQLNIKTMELYK 81
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRAL---------SNVADEGLLTEGFFWIPSLAGPTT 231
++P GCLP L P+ IGL+ A+ S A E + T F W+P+L T
Sbjct: 82 EHNVSPFGGCLPLLIQFPIIIGLFAAVREPGTYVFGSQAAYEAINT-SFLWLPNL----T 136
Query: 232 IAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMK 291
+A W +LP+L ++ Y+S + S ++ D +
Sbjct: 137 VAD-------PW--------------------ILPILAGLTTYLSSATLTSGKSAD---Q 166
Query: 292 SSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+ + +T F+P+MI ++ + P+GL+LYWF +N+ T QQ+ L++
Sbjct: 167 TQKIMTYFMPVMIFWWGKTFPAGLTLYWFVSNVFQTIQQLILRR 210
>gi|406891438|gb|EKD37063.1| hypothetical protein ACD_75C01273G0002 [uncultured bacterium]
Length = 555
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 111/218 (50%), Gaps = 30/218 (13%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG AIIL+T++ KAA +P+++K ++S M+ L P++ I+E+Y D R+ E LYK
Sbjct: 357 YGIAIILVTILFKAAFWPISQKGMKSMKNMQKLQPKMVKIREKYKSDPTRMNQEVMNLYK 416
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPL GCLP + IPV+ LY+ L + E WI L+ P +
Sbjct: 417 TYKVNPLGGCLPMVLQIPVFFALYKVLLQ-SIELRHAPFMLWITDLSAPDRL-------- 467
Query: 241 ISWL---FPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALT 297
WL P++ G P VL +L+ S + K+ S DP + +
Sbjct: 468 --WLGFDIPYLGGLP-----------VLTLLMGASMFFQQKL--SPTTADP---TQAKIM 509
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
FLP++ + L+ SGL LYWF NNLLS QQV + +
Sbjct: 510 QFLPIIFTFMFLNFASGLVLYWFVNNLLSILQQVLINR 547
>gi|420421217|ref|ZP_14920295.1| inner membrane protein oxaA [Helicobacter pylori NQ4110]
gi|393037735|gb|EJB38769.1| inner membrane protein oxaA [Helicobacter pylori NQ4110]
Length = 545
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 110/215 (51%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y + ++ DP + L
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWHQGVTPNTM-TDP---MQAKIFKLL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|83747144|ref|ZP_00944187.1| 60 kDa inner membrane protein YIDC [Ralstonia solanacearum UW551]
gi|207741912|ref|YP_002258304.1| preprotein translocase subunit yidc [Ralstonia solanacearum
IPO1609]
gi|83726119|gb|EAP73254.1| 60 kDa inner membrane protein YIDC [Ralstonia solanacearum UW551]
gi|206593298|emb|CAQ60225.1| preprotein translocase subunit yidc [Ralstonia solanacearum
IPO1609]
Length = 563
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 104/211 (49%), Gaps = 29/211 (13%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++I+ LTV+VK FPL+ S M+ L P++ AI+ER+ GD +++ E LY+
Sbjct: 364 WGWSIVALTVLVKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHKGDPQKMNQEMMTLYR 423
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRA-LSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+NPL GCLP L IPV++ LY A LS+V G G W+ LA P + G
Sbjct: 424 TEKVNPLGGCLPILIQIPVFMSLYWALLSSVEMRGAPWVG--WVHDLAAPDALFGTYFGV 481
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
P+G +LP+L+ VS ++ K+ N P + F
Sbjct: 482 -------------PVG--------LLPILMAVSMFVQTKL-----NPTPPDPVQAKMMMF 515
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL PSGL LYW NN LS AQQ
Sbjct: 516 MPLAFSVMFFFFPSGLVLYWVVNNCLSIAQQ 546
>gi|406897224|gb|EKD41239.1| Membrane protein oxaA [uncultured bacterium]
Length = 544
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 34/215 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII LT IVK P+ KK +ES AM+ L P++K IQ++Y GD+E++ +E ++K
Sbjct: 349 WGLAIIALTFIVKMILHPVNKKSMESMKAMQKLQPRMKEIQQKYKGDREKLNMEMMTMFK 408
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + +P++I LY+ L N +
Sbjct: 409 SHKVNPMGGCLPMILQMPIYIALYKVLWNAIE---------------------------- 440
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+ PF + L D Y V P LL V ++ K+ SS + DP + Q + F+
Sbjct: 441 -LYRAPFFGIYHDLSMPD--PYFVGPFLLGVLFFLQQKLTPSSASMDP---AQQKMMQFM 494
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PLM F + +P+GL +Y N L+S QQ + +
Sbjct: 495 PLMFTVFMVFLPAGLIMYILVNTLMSVIQQYMIHR 529
>gi|419698323|ref|ZP_14226038.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni LMG
23211]
gi|380675319|gb|EIB90227.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni LMG
23211]
Length = 530
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 41/253 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + +G+AI+++T+IV+ FPLT K + S ++
Sbjct: 314 WFTFIAKPMFEFLNFLHQYIGN------WGWAIVVMTLIVRIILFPLTYKSMISMNKLKD 367
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K I+ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 368 LAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 426
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L S Y +LP+L+ +
Sbjct: 427 ELKAAPLAFWIHDL------------------------------SVMDPYFILPILMGAT 456
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ ++I DP + FLP++ +F ++ P+GL+LYWF NNL S QQ
Sbjct: 457 MFLQ-QLITPMTIQDP---MQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQWV 512
Query: 333 LQKFGGAKDPMKQ 345
+ K + KQ
Sbjct: 513 INKIFAKEHHKKQ 525
>gi|261213269|ref|ZP_05927551.1| OxaI/YidC membrane insertion protein [Vibrio sp. RC341]
gi|260837543|gb|EEX64246.1| OxaI/YidC membrane insertion protein [Vibrio sp. RC341]
Length = 541
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 117/244 (47%), Gaps = 43/244 (17%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
WL I + +L V++ + +G AII LT IV+ A +PLTK Q S MR
Sbjct: 330 WLWFIAKPLHWLLSVIQSFVGN------WGVAIICLTFIVRGAMYPLTKAQYTSMAKMRM 383
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+++A++ER D++R+ E LYK +NPL GCLP + +P++I LY AL +
Sbjct: 384 LQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPIVLQMPIFIALYWALMESVE 443
Query: 213 EGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVV 271
L FF WI L+ Y +LP+L+
Sbjct: 444 --LRHSPFFGWIHDLSAQD------------------------------PYYILPLLMGA 471
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
S ++ ++ + + DP Q + F+P+M +F L PSGL LYW +N+++ QQ
Sbjct: 472 SMFV-IQKMSPTTVTDP---MQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQT 527
Query: 332 WLQK 335
+ K
Sbjct: 528 LIYK 531
>gi|195942021|ref|ZP_03087403.1| putative inner membrane protein translocase component YidC
[Borrelia burgdorferi 80a]
gi|226321073|ref|ZP_03796615.1| inner membrane protein OxaA [Borrelia burgdorferi 29805]
gi|226233483|gb|EEH32222.1| inner membrane protein OxaA [Borrelia burgdorferi 29805]
Length = 544
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 119/235 (50%), Gaps = 24/235 (10%)
Query: 101 METVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAI 160
M+ V++V D + +G +II LT++V+ FPLT K ++ + L P++K +
Sbjct: 329 MQMVMQVFYDVIPN------WGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKEL 382
Query: 161 QERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF 220
Q ++ D +++ E RLYK G+NPL GCLP + +P++ LY ++N+ L G
Sbjct: 383 QAKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNL----FLLRGA 438
Query: 221 FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII 280
+IP +I G F + W+D +LP +++ +Q S I
Sbjct: 439 SFIPGWIDDLSIGDSVYHFGYKLYF--------VSWTDI---RILPFIMMFTQLGST--I 485
Query: 281 QSSQNNDPNMKSSQALTNF-LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
SS + N+ + Q F +P+M + ++PSGL +YW T N+ + QQ +L+
Sbjct: 486 VSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYLK 540
>gi|419632262|ref|ZP_14164816.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23264]
gi|419684444|ref|ZP_14213043.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1577]
gi|380609168|gb|EIB28862.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23264]
gi|380667022|gb|EIB82505.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1577]
Length = 530
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 123/253 (48%), Gaps = 41/253 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + +G+AI+++T+IV+ FPLT K + S ++
Sbjct: 314 WFTFIAKPMFEFLNFLHQYIGN------WGWAIVVMTLIVRIILFPLTYKSMISMNKLKD 367
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K I+ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 368 LAPKMKDIRERYKGDPQKMNMYMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 426
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L S Y +LP+L+ +
Sbjct: 427 ELKAAPWAFWIHDL------------------------------SVMDPYFILPILMGAT 456
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ ++I DP M++ + FLP++ +F ++ P+GL+LYWF NNL S QQ
Sbjct: 457 MFLQ-QLITPMTIQDP-MQAK--IMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQWV 512
Query: 333 LQKFGGAKDPMKQ 345
+ K + KQ
Sbjct: 513 INKIFAKEHHKKQ 525
>gi|421899513|ref|ZP_16329876.1| preprotein translocase subunit yidc [Ralstonia solanacearum MolK2]
gi|206590719|emb|CAQ56331.1| preprotein translocase subunit yidc [Ralstonia solanacearum MolK2]
Length = 563
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 104/211 (49%), Gaps = 29/211 (13%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++I+ LTV+VK FPL+ S M+ L P++ AI+ER+ GD +++ E LY+
Sbjct: 364 WGWSIVALTVLVKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHKGDPQKMNQEMMTLYR 423
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRA-LSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+NPL GCLP L IPV++ LY A LS+V G G W+ LA P + G
Sbjct: 424 TEKVNPLGGCLPILIQIPVFMSLYWALLSSVEMRGAPWVG--WVHDLAAPDALFGTYFGV 481
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
P+G +LP+L+ VS ++ K+ N P + F
Sbjct: 482 -------------PVG--------LLPILMAVSMFVQTKL-----NPTPPDPVQAKMMMF 515
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL PSGL LYW NN LS AQQ
Sbjct: 516 MPLAFSVMFFFFPSGLVLYWVVNNCLSIAQQ 546
>gi|149186358|ref|ZP_01864671.1| putative inner membrane protein translocase component YidC
[Erythrobacter sp. SD-21]
gi|148829947|gb|EDL48385.1| putative inner membrane protein translocase component YidC
[Erythrobacter sp. SD-21]
Length = 579
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 119/213 (55%), Gaps = 18/213 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII+LT+IV+ FP+ +KQ S AM+++ P++K +QER+ D+ + Q E +L+K
Sbjct: 358 FGVAIIILTIIVRGLMFPIAQKQFASMAAMKAIQPKMKKLQERHKDDKVKQQQEMQKLFK 417
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPLAGCLP + IP++ LY+ L + + + F WI L+ P A N G
Sbjct: 418 EEQVNPLAGCLPLILQIPIFFALYKVLYLAIE--MRHQNFLWIEDLSAPDP-ATILNLFG 474
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
L PF PP A +L VLL V+ +++ K+ S+ DP Q + + +
Sbjct: 475 ---LLPFT---PP----SFLAIGILAVLLGVTMWLTFKLNPSAM--DP---VQQQVFSIM 519
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P ++ + +GL LYW T+N+L+ AQQ +L
Sbjct: 520 PWVLMFIMAPFAAGLLLYWVTSNVLTLAQQKYL 552
>gi|376298007|ref|YP_005169237.1| YidC/Oxa1 family membrane protein insertase [Desulfovibrio
desulfuricans ND132]
gi|323460569|gb|EGB16434.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio
desulfuricans ND132]
Length = 555
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 113/219 (51%), Gaps = 36/219 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG AII+LTVI+K +PL++K S M+ L P V ++E+Y D++R+ ET LYK
Sbjct: 358 YGVAIIILTVIIKLIFWPLSQKSYGSMEKMKKLQPMVAKLREKYGDDKQRLNQETMALYK 417
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IPV+ GLY+AL + ++
Sbjct: 418 TYKVNPMGGCLPMVVQIPVFFGLYKALLGAVE----------------------LRHAPF 455
Query: 241 ISWLFPFVDGHPPLGW-SDTFA---YLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
I+ L PF D L W +D A Y + P+++ S ++ K+ S+ DP + Q +
Sbjct: 456 IAHL-PFTD----LPWLADLSAKDPYYISPIIMGASMFLQQKMTPSA--GDP---TQQKI 505
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+PL+ + L PSGL +YW NNLLS QQ+ + +
Sbjct: 506 MLIMPLVFTFMFLQFPSGLVIYWLFNNLLSIGQQLMIAR 544
>gi|283954517|ref|ZP_06372036.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
414]
gi|283793921|gb|EFC32671.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
414]
Length = 454
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 120/253 (47%), Gaps = 41/253 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + +G+AI+++T+IV+ FPLT K + S ++
Sbjct: 238 WFTFIAKPMFEFLDFLHQYIGN------WGWAIVVMTLIVRIVLFPLTYKSMISMNKLKD 291
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K I+ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 292 LAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 350
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FW+ L S Y +LP+L+ +
Sbjct: 351 ELKAAPWAFWVHDL------------------------------SVMDPYFILPILMGAT 380
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ ++I DP + FLP++ +F ++ P+GL+LYWF NNL S QQ
Sbjct: 381 MFLQ-QLITPMAIQDP---MQAKIMKFLPVIFTFFFITFPAGLTLYWFINNLCSLVQQWV 436
Query: 333 LQKFGGAKDPMKQ 345
+ K + KQ
Sbjct: 437 INKIFAKEHHKKQ 449
>gi|451980392|ref|ZP_21928787.1| putative Inner membrane protein oxaA [Nitrospina gracilis 3/211]
gi|451762432|emb|CCQ90018.1| putative Inner membrane protein oxaA [Nitrospina gracilis 3/211]
Length = 559
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 112/221 (50%), Gaps = 38/221 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG+AIILLT ++K FPLT K +S M+ + P VK +QERY D++++ E LY+
Sbjct: 377 YGWAIILLTFVIKLIFFPLTHKSFKSMKGMQKIQPYVKVLQERYKDDRQKMNEEMIGLYR 436
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPL GCLP L IPV+I LY AL FF I L G
Sbjct: 437 KHKVNPLGGCLPMLLQIPVFIALYHAL------------FFSI-ELRGA----------- 472
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
PF+ L SD Y V PVL+ + Y+ K+ + DP Q + +
Sbjct: 473 -----PFILWIEDLSQSD--PYFVTPVLMGATMYLQQKLTPTVA--DP---VQQKIFLMM 520
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKD 341
P++ + ++ P+GL +YW NNLL+ +QQ ++ + AKD
Sbjct: 521 PILFTFLFITFPAGLVVYWTVNNLLTISQQYYI--YHVAKD 559
>gi|359688989|ref|ZP_09258990.1| preprotein translocase, YidC subunit [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418749016|ref|ZP_13305308.1| 60Kd inner membrane protein [Leptospira licerasiae str. MMD4847]
gi|418756343|ref|ZP_13312531.1| 60Kd inner membrane protein [Leptospira licerasiae serovar Varillal
str. VAR 010]
gi|384116014|gb|EIE02271.1| 60Kd inner membrane protein [Leptospira licerasiae serovar Varillal
str. VAR 010]
gi|404276085|gb|EJZ43399.1| 60Kd inner membrane protein [Leptospira licerasiae str. MMD4847]
Length = 618
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 113/214 (52%), Gaps = 24/214 (11%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YGF I+L ++ K +PL +KQ E+ M +L+P++K + E+YA D + Q + LY
Sbjct: 411 SYGFGILLFALVFKLVFYPLNQKQAEAMKKMSALSPELKKLNEKYANDPAKKQEKMLELY 470
Query: 180 KLAGINPLA---GCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ 236
K +NPL+ GCLP L +P++ LY A ++ D L F WI L+ P I
Sbjct: 471 KKHNMNPLSQLGGCLPMLIQLPIFFALYVAFADTID--LWKSPFLWISDLSEPDFI---- 524
Query: 237 NGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
W P + G S +L +L+V +Q++S+K+ +S DPN K L
Sbjct: 525 ------WTSPAIPYLSATGLSIN----LLVLLMVGTQFLSMKL--TSVQTDPNQKMMMYL 572
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+ + +F S+PSGL+LYW N+LS AQQ
Sbjct: 573 MPVMMV---FFLWSMPSGLTLYWTVTNILSIAQQ 603
>gi|449144918|ref|ZP_21775729.1| putative Inner membrane protein [Vibrio mimicus CAIM 602]
gi|449079438|gb|EMB50361.1| putative Inner membrane protein [Vibrio mimicus CAIM 602]
Length = 541
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 107/216 (49%), Gaps = 37/216 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII LT IV+ A +PLTK Q S MR L P+++A++ER D++R+ E LYK
Sbjct: 352 WGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYK 411
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGS 239
+NPL GCLP L +P++I LY AL + L FF WI L+
Sbjct: 412 KEKVNPLGGCLPILLQMPIFIALYWALMESVE--LRHSPFFGWIHDLSAQD--------- 460
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
Y +LP+L+ S ++ ++ + + DP Q + F
Sbjct: 461 ---------------------PYYILPLLMGASMFV-IQKMSPTTITDP---MQQKIMTF 495
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+P+M +F L PSGL LYW +N+++ QQ + K
Sbjct: 496 MPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYK 531
>gi|347526419|ref|YP_004833166.1| inner membrane protein OxaA [Sphingobium sp. SYK-6]
gi|345135100|dbj|BAK64709.1| inner membrane protein OxaA [Sphingobium sp. SYK-6]
Length = 574
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 114/215 (53%), Gaps = 17/215 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII LT IV+ FP+ ++Q S AMR++ P++KAIQERY D+ + Q E LY+
Sbjct: 364 FGVAIICLTFIVRGLMFPIAQRQFASMAAMRAIQPKMKAIQERYKDDKVKQQQEIMELYR 423
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPLAGCLP IP++ LY+ L +A E + WI L+ P + N G
Sbjct: 424 SEKVNPLAGCLPIFLQIPIFFALYKVLM-LAVEMRHQPFYLWIKDLSAPDPLHIL-NLFG 481
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
L PF PP +L V+L ++ ++ K+ N P + + + + +
Sbjct: 482 ---LLPFT---PP----SFLGIGLLAVILGITMWLQFKL-----NPAPMDEMQKQIFSIM 526
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P ++ + +GL +YW T+N+L+ AQQ WL +
Sbjct: 527 PWVMMFIMAPFAAGLLIYWCTSNILTIAQQWWLYR 561
>gi|262166780|ref|ZP_06034517.1| OxaI/YidC membrane insertion protein [Vibrio mimicus VM223]
gi|262026496|gb|EEY45164.1| OxaI/YidC membrane insertion protein [Vibrio mimicus VM223]
Length = 541
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 107/216 (49%), Gaps = 37/216 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII LT IV+ A +PLTK Q S MR L P+++A++ER D++R+ E LYK
Sbjct: 352 WGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYK 411
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGS 239
+NPL GCLP L +P++I LY AL + L FF WI L+
Sbjct: 412 KEKVNPLGGCLPILLQMPIFIALYWALMESVE--LRHSPFFGWIHDLSAQD--------- 460
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
Y +LP+L+ S ++ ++ + + DP Q + F
Sbjct: 461 ---------------------PYYILPLLMGASMFV-IQKMSPTTITDP---MQQKIMTF 495
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+P+M +F L PSGL LYW +N+++ QQ + K
Sbjct: 496 MPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYK 531
>gi|262172772|ref|ZP_06040450.1| OxaI/YidC membrane insertion protein [Vibrio mimicus MB-451]
gi|261893848|gb|EEY39834.1| OxaI/YidC membrane insertion protein [Vibrio mimicus MB-451]
Length = 541
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 107/216 (49%), Gaps = 37/216 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII LT IV+ A +PLTK Q S MR L P+++A++ER D++R+ E LYK
Sbjct: 352 WGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYK 411
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGS 239
+NPL GCLP L +P++I LY AL + L FF WI L+
Sbjct: 412 KEKVNPLGGCLPILLQMPIFIALYWALMESVE--LRHSPFFGWIHDLSAQD--------- 460
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
Y +LP+L+ S ++ ++ + + DP Q + F
Sbjct: 461 ---------------------PYYILPLLMGASMFV-IQKMSPTTITDP---MQQKIMTF 495
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+P+M +F L PSGL LYW +N+++ QQ + K
Sbjct: 496 MPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYK 531
>gi|262402088|ref|ZP_06078652.1| OxaI/YidC membrane insertion protein [Vibrio sp. RC586]
gi|262351734|gb|EEZ00866.1| OxaI/YidC membrane insertion protein [Vibrio sp. RC586]
Length = 541
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 107/216 (49%), Gaps = 37/216 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII LT IV+ A +PLTK Q S MR L P+++A++ER D++R+ E LYK
Sbjct: 352 WGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYK 411
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGS 239
+NPL GCLP L +P++I LY AL + L FF WI L+
Sbjct: 412 KEKVNPLGGCLPILLQMPIFIALYWALMESVE--LRHSPFFGWIHDLSAQD--------- 460
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
Y +LP+L+ S ++ ++ + + DP Q + F
Sbjct: 461 ---------------------PYYILPLLMGASMFV-IQKMSPTTITDP---MQQKIMTF 495
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+P+M +F L PSGL LYW +N+++ QQ + K
Sbjct: 496 MPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYK 531
>gi|296121961|ref|YP_003629739.1| 60 kDa inner membrane insertion protein [Planctomyces limnophilus
DSM 3776]
gi|296014301|gb|ADG67540.1| 60 kDa inner membrane insertion protein [Planctomyces limnophilus
DSM 3776]
Length = 699
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 134/266 (50%), Gaps = 28/266 (10%)
Query: 76 AAVSSSDAVTTTKQNSDW-----LSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTV 130
AAV ++D T+ + W L + ++ + L +G+ L + YG AIILLT+
Sbjct: 399 AAVGAAD---VTEYHIGWNPFFFLEPLVRLLVIPMLALLNGLHALGI--NYGIAIILLTI 453
Query: 131 IVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGC 190
IV+ PLT+KQ +S+ M+ + P++K +Q+++AGD + ++ LY G NPLAGC
Sbjct: 454 IVRTCLMPLTRKQAQSAQRMKEMQPKLKELQKKFAGDADGLRRAQLELYSKHGFNPLAGC 513
Query: 191 LPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDG 250
P L +P++ LYRALS D L F WI +LA P LF
Sbjct: 514 WPVLLQMPIFFALYRALSVSVD--LRRASFLWIDNLAAPDA------------LFELPFR 559
Query: 251 HPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALS 310
P LGW++ + +LP+L ++ KI+ ++ + + + +M F
Sbjct: 560 VPFLGWTE---FNLLPILTIILFVAQQKILMPPPADEEQAMQYRMMNIMMVMMGVMF-YR 615
Query: 311 VPSGLSLYWFTNNLLSTAQQVWLQKF 336
VP+GL +Y+ T++L A++ + +
Sbjct: 616 VPAGLCIYFITSSLWGMAERWFFDRM 641
>gi|71909810|ref|YP_287397.1| protein translocase subunit yidC [Dechloromonas aromatica RCB]
gi|123746663|sp|Q477Q4.1|YIDC_DECAR RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|71849431|gb|AAZ48927.1| protein translocase subunit yidC [Dechloromonas aromatica RCB]
Length = 547
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 36/210 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI++LT+++KA FPL+ +S M+ L P++ ++ER+ D++R+ E +LY+
Sbjct: 355 WGWAIVVLTIMIKAVFFPLSAASYKSMAKMKMLTPRLAQLKERFGDDKQRLNQEMMKLYQ 414
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPL GCLP L IPV+I LY L + +
Sbjct: 415 TEKVNPLGGCLPILVQIPVFIALYWVLLGAVE----------------------MRGAPW 452
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I W+ P Y +LPV+++VS ++ K+ N P + +
Sbjct: 453 ILWIKDLASADP---------YYILPVIMMVSMFVQTKL-----NPTPPDPIQAKVMMMM 498
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
PL+ G+ P+GL LYW NN+LS AQQ
Sbjct: 499 PLIFGFMFFWFPAGLVLYWVVNNVLSIAQQ 528
>gi|398819156|ref|ZP_10577717.1| membrane protein insertase, YidC/Oxa1 family containing protein
[Bradyrhizobium sp. YR681]
gi|398230159|gb|EJN16220.1| membrane protein insertase, YidC/Oxa1 family containing protein
[Bradyrhizobium sp. YR681]
Length = 613
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 115/220 (52%), Gaps = 11/220 (5%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+L+TVIVK FPL K S M+S+ PQ++A++ERY D+ + Q E +Y+
Sbjct: 389 FGISILLVTVIVKLLFFPLANKSYASMAKMKSVQPQLQALKERYPDDKVKQQQEMMEIYR 448
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INP+AGCLP + IPV+ LY+ L V E F WI L+ P N
Sbjct: 449 KEKINPVAGCLPVVIQIPVFFSLYKVLF-VTIEMRHAPFFGWIKDLSAPDP----TNLFT 503
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+ L PF PL + A + P+++ ++ + +K+ N P + Q + N++
Sbjct: 504 LFGLIPFDPTTIPL-FGHYLALGIWPIIMGITMWFQMKL-----NPTPPDPTQQLIFNWM 557
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
PL+ + P+GL +YW NN LS QQ ++ + G K
Sbjct: 558 PLIFTFMLAGFPAGLVIYWAWNNTLSVLQQSFIMRRNGVK 597
>gi|419626127|ref|ZP_14159125.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni LMG
23223]
gi|419688772|ref|ZP_14217088.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1854]
gi|380603741|gb|EIB23808.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni LMG
23223]
gi|380664881|gb|EIB80468.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1854]
Length = 530
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 41/253 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + +G+AI+++T+IV+ FPLT K + S ++
Sbjct: 314 WFTFIAKPMFEFLNFLHQYIGN------WGWAIVVMTLIVRIILFPLTYKSMISMNKLKD 367
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K I+ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 368 LAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 426
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L S Y +LP+L+ +
Sbjct: 427 ELKAAPWAFWIHDL------------------------------SVMDPYFILPILMGAT 456
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ ++I DP + FLP++ +F ++ P+GL+LYWF NNL S QQ
Sbjct: 457 MFLQ-QLITPMTIQDP---MQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQWV 512
Query: 333 LQKFGGAKDPMKQ 345
+ K + KQ
Sbjct: 513 INKIFVKEHHKKQ 525
>gi|258626076|ref|ZP_05720927.1| inner membrane protein, 60 kDa [Vibrio mimicus VM603]
gi|258581602|gb|EEW06500.1| inner membrane protein, 60 kDa [Vibrio mimicus VM603]
Length = 539
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 107/216 (49%), Gaps = 37/216 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII LT IV+ A +PLTK Q S MR L P+++A++ER D++R+ E LYK
Sbjct: 350 WGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYK 409
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGS 239
+NPL GCLP L +P++I LY AL + L FF WI L+
Sbjct: 410 KEKVNPLGGCLPILLQMPIFIALYWALMESVE--LRHSPFFGWIHDLSAQD--------- 458
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
Y +LP+L+ S ++ ++ + + DP Q + F
Sbjct: 459 ---------------------PYYILPLLMGASMFV-IQKMSPTTITDP---MQQKIMTF 493
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+P+M +F L PSGL LYW +N+++ QQ + K
Sbjct: 494 MPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYK 529
>gi|85712624|ref|ZP_01043671.1| Preprotein translocase subunit YidC [Idiomarina baltica OS145]
gi|85693615|gb|EAQ31566.1| Preprotein translocase subunit YidC [Idiomarina baltica OS145]
Length = 554
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 110/216 (50%), Gaps = 37/216 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIIL+TVI+KA FPLTK Q S MR L P++K+++ERY D++++ +LYK
Sbjct: 363 WGLAIILITVIIKALLFPLTKAQYVSMAKMRLLQPKMKSLRERYGDDRQKMGQAMMKLYK 422
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF-FWIPSLAGPTTIAARQNGS 239
+NPL GCLP L +P+++ LY L + L F FWI L
Sbjct: 423 EEKVNPLGGCLPMLLQLPIFLSLYWVLLESVE--LRHSSFVFWIQDL------------- 467
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
S Y +LP+L+ +S ++ ++ +Q + DP Q L +
Sbjct: 468 -----------------STKDPYYILPILMGISMFV-MQRLQPTPATDP---MQQKLFQY 506
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+P++ F L PSGL LYW +NL++ Q + + K
Sbjct: 507 MPVIFTVFFLWFPSGLVLYWLVSNLITITQMLIIYK 542
>gi|258622952|ref|ZP_05717967.1| inner membrane protein, 60 kDa [Vibrio mimicus VM573]
gi|424810934|ref|ZP_18236268.1| inner membrane protein, 60 kDa [Vibrio mimicus SX-4]
gi|258584735|gb|EEW09469.1| inner membrane protein, 60 kDa [Vibrio mimicus VM573]
gi|342321945|gb|EGU17741.1| inner membrane protein, 60 kDa [Vibrio mimicus SX-4]
Length = 541
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 107/216 (49%), Gaps = 37/216 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII LT IV+ A +PLTK Q S MR L P+++A++ER D++R+ E LYK
Sbjct: 352 WGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYK 411
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGS 239
+NPL GCLP L +P++I LY AL + L FF WI L+
Sbjct: 412 KEKVNPLGGCLPILLQMPIFIALYWALMESVE--LRHSPFFGWIHDLSAQD--------- 460
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
Y +LP+L+ S ++ ++ + + DP Q + F
Sbjct: 461 ---------------------PYYILPLLMGASMFV-IQKMSPTTITDP---MQQKIMTF 495
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+P+M +F L PSGL LYW +N+++ QQ + K
Sbjct: 496 MPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYK 531
>gi|404252906|ref|ZP_10956874.1| membrane protein insertase [Sphingomonas sp. PAMC 26621]
Length = 589
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 113/212 (53%), Gaps = 21/212 (9%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLTV ++ FP+ ++Q S AM++L P++KAIQE+Y D+ R Q E LYK
Sbjct: 376 FGVAIILLTVTIRTLIFPVAQRQFASMAAMKALQPKMKAIQEKYKDDKARQQQEVMALYK 435
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGS 239
+NPLAGCLPTL IP+ LY+ L + + + F WI L+ P + +
Sbjct: 436 TEKVNPLAGCLPTLIQIPIMYSLYKVLLLTIE--MRHQPFVGWIHDLSAP-------DPA 486
Query: 240 GISWLFPFVDGH-PPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTN 298
I LF ++ H PP A ++PVLL VS + K+ N P + + +
Sbjct: 487 TILNLFGYLPYHLPPF-----LAIGIVPVLLGVSMFFQFKL-----NPAPMDDAQKQVFA 536
Query: 299 FLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+P ++ + GL +YW T+NL + AQQ
Sbjct: 537 LMPWVLMFVMAPFAVGLQVYWITSNLWTVAQQ 568
>gi|343127750|ref|YP_004777681.1| 60Kd inner membrane family protein [Borrelia bissettii DN127]
gi|342222438|gb|AEL18616.1| 60Kd inner membrane family protein [Borrelia bissettii DN127]
Length = 532
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 118/235 (50%), Gaps = 24/235 (10%)
Query: 101 METVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAI 160
M+ V++V D + +G +II LT++V+ FPLT K ++ + L P++K +
Sbjct: 317 MQMVMQVFYDVIPN------WGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKEL 370
Query: 161 QERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF 220
Q R+ D +++ E RLYK G+NPL GC P + +P++ LY ++N+ L G
Sbjct: 371 QLRFKHDPKKLNEEMGRLYKEEGVNPLGGCFPVILQLPIFFALYSLVNNL----FLLRGA 426
Query: 221 FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII 280
+IP +I G F + W+D +LP +++ +Q S I
Sbjct: 427 SFIPGWIDDLSIGDSVYHFGYKLYF--------VSWTDI---RILPFIMMFTQLGST--I 473
Query: 281 QSSQNNDPNMKSSQALTNF-LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
SS + N+ S Q F +P+M + ++PSGL +YW T N+ + QQ +++
Sbjct: 474 VSSNMDLKNLGSQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIK 528
>gi|153951835|ref|YP_001397950.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. doylei 269.97]
gi|152939281|gb|ABS44022.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. doylei
269.97]
Length = 530
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 113/225 (50%), Gaps = 35/225 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+++T+IV+ FPLT K + S ++ LAP++K I+ERY GD +++ + LYK
Sbjct: 336 WGWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKGDPQKMNMHMMELYK 395
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NP++GCLP L IP++ +YR L N A E FWI L
Sbjct: 396 KHGANPMSGCLPILLQIPIFFAIYRVLLN-AIELKAAPWAFWIHDL-------------- 440
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
S Y +LP+L+ + ++ ++I DP + FL
Sbjct: 441 ----------------SVMDPYFILPILMGATMFLQ-QLITPMTIQDP---MQAKIMKFL 480
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQ 345
P++ +F ++ P+GL+LYWF NNL S QQ + K + KQ
Sbjct: 481 PVIFTFFFITFPAGLTLYWFVNNLCSLVQQWVINKIFAKEHHKKQ 525
>gi|383774848|ref|YP_005453917.1| inner membrane protein OxaA [Bradyrhizobium sp. S23321]
gi|381362975|dbj|BAL79805.1| inner membrane protein OxaA [Bradyrhizobium sp. S23321]
Length = 616
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 114/220 (51%), Gaps = 11/220 (5%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+L+TVIVK FPL K S M+S+ PQ+ A++ERY D+ + Q E +Y+
Sbjct: 392 FGISILLVTVIVKLLFFPLANKSYASMAKMKSVQPQLAALKERYPDDKVKQQQEMMEIYR 451
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INP+AGCLP + IPV+ LY+ L V E F WI L+ P N
Sbjct: 452 KEKINPVAGCLPVVIQIPVFFSLYKVLF-VTIEMRHAPFFGWIKDLSAPDP----TNLFT 506
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+ L PF PL + A + P+++ ++ + +K+ N P + Q + N++
Sbjct: 507 LFGLIPFDPTTLPL-FGHYLALGIWPIIMGITMWFQMKL-----NPTPPDPTQQMIFNWM 560
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
PL+ + P+GL +YW NN LS QQ ++ + G K
Sbjct: 561 PLIFTFMLAGFPAGLVIYWAWNNTLSVLQQSFIMRRNGVK 600
>gi|337286004|ref|YP_004625477.1| membrane protein insertase, YidC/Oxa1 family [Thermodesulfatator
indicus DSM 15286]
gi|335358832|gb|AEH44513.1| membrane protein insertase, YidC/Oxa1 family [Thermodesulfatator
indicus DSM 15286]
Length = 536
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 109/211 (51%), Gaps = 24/211 (11%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG +IILLTV+++ +PL +++ M+ L P + ++E+Y D+E++ E R+YK
Sbjct: 339 YGISIILLTVLIRIIFWPLNHISMKNMKKMKDLQPIIARLKEKYGDDKEKLNQELMRIYK 398
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+ LY+ L +A E F WI L+ P + G
Sbjct: 399 TYKVNPFMGCLPMIIQIPVFFSLYKVLL-MAIELRHAPFFAWIKDLSSPDRLPV-----G 452
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I P++ G P VL +L+ +S Y K+ +S DP + + + +
Sbjct: 453 ID--IPYLGGIP-----------VLTILMGISMYFQQKLTPTSM--DP---TQEKMMLLM 494
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
P+ ++ PSGL LYW TNN+LS QQV
Sbjct: 495 PIFFTILFVNFPSGLVLYWLTNNILSIVQQV 525
>gi|86150951|ref|ZP_01069167.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
260.94]
gi|86152990|ref|ZP_01071195.1| inner membrane protein oxaA [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|121613009|ref|YP_001000640.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 81-176]
gi|167005567|ref|ZP_02271325.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 81-176]
gi|419618021|ref|ZP_14151580.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 129-258]
gi|419669810|ref|ZP_14199577.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1997-11]
gi|85842121|gb|EAQ59367.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
260.94]
gi|85843875|gb|EAQ61085.1| inner membrane protein oxaA [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|87248917|gb|EAQ71880.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
81-176]
gi|380595853|gb|EIB16572.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 129-258]
gi|380646243|gb|EIB63221.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1997-11]
Length = 528
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 123/255 (48%), Gaps = 42/255 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + +G+AI+++T+IV+ FPLT K + S ++
Sbjct: 314 WFTFIAKPMFEFLNFLHQYIGN------WGWAIVVMTLIVRIILFPLTYKSMISMNKLKD 367
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K I+ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 368 LAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 426
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L S Y +LP+L+ +
Sbjct: 427 ELKAAPWAFWIHDL------------------------------SVMDPYFILPILMGAT 456
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ ++I DP + FLP++ +F ++ P+GL+LYWF NNL S QQ W
Sbjct: 457 MFLQ-QLITPMTIQDP---MQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQ-W 511
Query: 333 LQKFGGAKDPMKQFS 347
+ AK+ K+ S
Sbjct: 512 VINKIFAKEHHKKTS 526
>gi|417844583|ref|ZP_12490624.1| Inner membrane protein oxaA [Haemophilus haemolyticus M21639]
gi|341956542|gb|EGT82963.1| Inner membrane protein oxaA [Haemophilus haemolyticus M21639]
Length = 542
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 37/211 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII +T++VKA +PLTK Q S MR L P+++ ++ER+ D++R+ E +LYK
Sbjct: 351 WGLAIICVTIVVKAILYPLTKAQYTSMAKMRMLQPKMQEMRERFGDDRQRMSQEMMKLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGS 239
+NPL GCLP L +P++I LY + L FF WI L+
Sbjct: 411 EEKVNPLGGCLPILLQMPIFIALYWTFMEAVE--LRHAPFFGWIQDLSAQD--------- 459
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
Y + P+L+ +S ++ K + + DP Q + NF
Sbjct: 460 ---------------------PYYIFPILMGISMFLLQK-MSPTPVTDP---MQQKVMNF 494
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ +F L P+GL LYW +NL++ QQ
Sbjct: 495 MPLVFMFFFLWFPAGLVLYWLVSNLITITQQ 525
>gi|153008692|ref|YP_001369907.1| putative inner membrane protein translocase component YidC
[Ochrobactrum anthropi ATCC 49188]
gi|404318491|ref|ZP_10966424.1| membrane protein insertase [Ochrobactrum anthropi CTS-325]
gi|151560580|gb|ABS14078.1| 60 kDa inner membrane insertion protein [Ochrobactrum anthropi ATCC
49188]
Length = 607
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 114/220 (51%), Gaps = 17/220 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+++TV++K FPL K +S M+ + P++ I+E+YA D+ + Q E RLYK
Sbjct: 385 FGVAILVVTVLLKGLFFPLANKSYKSMARMKLVQPKLTEIREKYADDKMKQQQEMMRLYK 444
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPLAGC P L IPV+ LY+ L V E F WI LA P + +
Sbjct: 445 EEKINPLAGCWPVLVQIPVFFALYKVLY-VTIEMRHAPFFGWIQDLAAP-------DPTS 496
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+ LF G P G V P+L+ ++ ++ +++ N P + A+ ++
Sbjct: 497 LFNLF----GLLPFGVPHFLMIGVWPLLMGITMFLQMRM-----NPTPPDPTQAAIFTWM 547
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
P++ + S P+GL +YW NNLLS QQ + K G K
Sbjct: 548 PVIFTFMLASFPAGLVIYWAWNNLLSITQQGIIMKRQGVK 587
>gi|421709230|ref|ZP_16148590.1| inner membrane protein oxaA [Helicobacter pylori R018c]
gi|421722487|ref|ZP_16161746.1| inner membrane protein oxaA [Helicobacter pylori R056a]
gi|407211787|gb|EKE81652.1| inner membrane protein oxaA [Helicobacter pylori R018c]
gi|407226271|gb|EKE96037.1| inner membrane protein oxaA [Helicobacter pylori R056a]
Length = 546
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ +GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTIFLITFSAGLVLYWTTNNILSVLQQLIINK 530
>gi|419622826|ref|ZP_14156045.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23216]
gi|380598388|gb|EIB18799.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23216]
Length = 530
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 119/253 (47%), Gaps = 41/253 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + +G+AI+ +T+IV+ FPLT K + S ++
Sbjct: 314 WFTFIAKPMFEFLNFLHQYIGN------WGWAIVAMTLIVRIILFPLTYKSMISMNKLKD 367
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K I+ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 368 LAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 426
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L S Y +LP+L+ +
Sbjct: 427 ELKAAPWAFWIHDL------------------------------SVMDPYFILPILMGAT 456
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ ++I DP + FLP++ +F ++ P+GL+LYWF NNL S QQ
Sbjct: 457 MFLQ-QLITPMTIQDP---MQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQWV 512
Query: 333 LQKFGGAKDPMKQ 345
+ K + KQ
Sbjct: 513 INKIFAKEHHKKQ 525
>gi|365873923|ref|ZP_09413456.1| membrane protein insertase, YidC/Oxa1 family [Thermanaerovibrio
velox DSM 12556]
gi|363984010|gb|EHM10217.1| membrane protein insertase, YidC/Oxa1 family [Thermanaerovibrio
velox DSM 12556]
Length = 267
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 118/230 (51%), Gaps = 34/230 (14%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YG +IILLTV+V+ PL+ KQ+ S M+ + P++K IQE+YA D+E++ E +LY
Sbjct: 25 SYGLSIILLTVVVRILLHPLSHKQMVSMQRMQKIQPRLKVIQEKYANDKEKMNQEMMQLY 84
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIP--------------- 224
K G+NP AGCLP L +P++I LYR L N F +P
Sbjct: 85 KEHGVNPAAGCLPLLVQLPIFILLYRVLMNYDFS---NTSFLGVPLSTSALGALGAALGM 141
Query: 225 SLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQ 284
+ PT A G+ I+ P G + Y +L+ V +++ + S
Sbjct: 142 GASKPTFTAVL--GAIIT---------NPAGLARVDLYGASVILIAVVGFLTWYQQKLSS 190
Query: 285 NNDPNMKSSQALTN-FLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
N+P M A N F+PL + + LS+P G+ +YW ++L+S AQQ W+
Sbjct: 191 GNNPQM----AFMNWFMPLFMSFICLSLPGGVMIYWGASSLISVAQQKWV 236
>gi|395492518|ref|ZP_10424097.1| membrane protein insertase [Sphingomonas sp. PAMC 26617]
Length = 589
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 113/212 (53%), Gaps = 21/212 (9%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLTV ++ FP+ ++Q S AM++L P++KAIQE+Y D+ R Q E LYK
Sbjct: 376 FGVAIILLTVTIRTLIFPVAQRQFASMAAMKALQPKMKAIQEKYKDDKARQQQEVMALYK 435
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGS 239
+NPLAGCLPTL IP+ LY+ L + + + F WI L+ P + +
Sbjct: 436 TEKVNPLAGCLPTLIQIPIMYSLYKVLLLTIE--MRHQPFVGWIHDLSAP-------DPA 486
Query: 240 GISWLFPFVDGH-PPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTN 298
I LF ++ H PP A ++PVLL VS + K+ N P + + +
Sbjct: 487 TILNLFGYLPYHLPPF-----LAIGIVPVLLGVSMFFQFKL-----NPAPMDDAQKQVFA 536
Query: 299 FLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+P ++ + GL +YW T+NL + AQQ
Sbjct: 537 LMPWVLMFVMAPFAVGLQVYWITSNLWTVAQQ 568
>gi|283782053|ref|YP_003372808.1| 60 kDa inner membrane insertion protein [Pirellula staleyi DSM
6068]
gi|283440506|gb|ADB18948.1| 60 kDa inner membrane insertion protein [Pirellula staleyi DSM
6068]
Length = 841
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 125/242 (51%), Gaps = 22/242 (9%)
Query: 97 ITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQ 156
+ +V+ET+ ++ + YG AIILLTVIV++A P++ KQ +S+ M+ LAP+
Sbjct: 581 LRSVLETIYSIIPN----------YGIAIILLTVIVRSAMIPVSLKQAKSAAMMQQLAPE 630
Query: 157 VKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALS---NVADE 213
+ I+E+YA + E+ LY NP GCLP +PV+IGLYR LS + D
Sbjct: 631 MAKIKEKYADNMEKQSQAIRELYAKHNFNPFGGCLPVFIQLPVFIGLYRCLSVDIELRDA 690
Query: 214 GLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQ 273
L G W +LAGP + ++ ++F + G GW F + V P L+ VS
Sbjct: 691 ALFP-GIAWASNLAGPDKLFYWKD-----YVFSMM-GDEANGWLGPF-FNVFP-LITVSL 741
Query: 274 YISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
++ + + + D Q + ++ + +G VP+GL +Y+ T++L A++ L
Sbjct: 742 FLVQQKMFTPPATDEQTAMQQKMMTYMTVFMGVMFYKVPAGLCVYFITSSLWGIAERKLL 801
Query: 334 QK 335
K
Sbjct: 802 PK 803
>gi|224372873|ref|YP_002607245.1| putative inner membrane protein translocase component YidC
[Nautilia profundicola AmH]
gi|223589049|gb|ACM92785.1| inner membrane protein OxaA [Nautilia profundicola AmH]
Length = 513
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 110/213 (51%), Gaps = 37/213 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILL V+V+ FPLT K + S ++ LAP++K IQ++Y D +++Q+ +LYK
Sbjct: 327 WGVAIILLVVLVRLVLFPLTYKGMVSMYKLKELAPKMKEIQQKYKKDPQKLQMHMMKLYK 386
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ G+Y+ L + L F WI L
Sbjct: 387 EHGANPLGGCLPLILQIPVFYGIYKLLLYAIE--LKGASFLWIKDL-------------- 430
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
S + P Y +LPVL+ VS YI K + + DP + + FL
Sbjct: 431 -SVMDP---------------YFILPVLMGVSMYIHQK-LTPTNFQDP---MQEKIFKFL 470
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
PL+ + + P+GL LYW NN+LS AQQ WL
Sbjct: 471 PLIFTFMMATFPAGLVLYWTVNNILSIAQQ-WL 502
>gi|51244707|ref|YP_064591.1| hypothetical protein DP0855 [Desulfotalea psychrophila LSv54]
gi|50875744|emb|CAG35584.1| conserved hypothetical membrane protein [Desulfotalea psychrophila
LSv54]
Length = 553
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 112/215 (52%), Gaps = 24/215 (11%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG AIIL+T++ K +P+T+K ++S M+ L P++ A++E++ D R+ E LYK
Sbjct: 354 YGIAIILVTIMFKGIFWPITQKGMKSMKNMQKLQPKMAALKEKHKDDPTRMNKEVMSLYK 413
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPL GCLP + IPV+ LY+ L ++ E FWI L+ P +
Sbjct: 414 AYKVNPLGGCLPMVLQIPVFFALYKVLL-LSIELRHAPFMFWITDLSAPDRL-------W 465
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I + P++ G P VL +L+ S ++ K S DP + + FL
Sbjct: 466 IGFNLPYLGGLP-----------VLTLLMGASMFLQQKF--SPTTADP---TQAKIMMFL 509
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++ + L+ SGL LYWF NNLLS QQV + +
Sbjct: 510 PVVFTFMFLNFASGLVLYWFVNNLLSILQQVLINR 544
>gi|86150679|ref|ZP_01068900.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88596386|ref|ZP_01099623.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
84-25]
gi|218562577|ref|YP_002344356.1| inner membrane protein translocase component YidC [Campylobacter
jejuni subsp. jejuni NCTC 11168 = ATCC 700819]
gi|317511993|ref|ZP_07969249.1| 60Kd inner membrane family protein [Campylobacter jejuni subsp.
jejuni 305]
gi|384448210|ref|YP_005656261.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni IA3902]
gi|403055700|ref|YP_006633105.1| inner membrane protein translocase component YidC [Campylobacter
jejuni subsp. jejuni NCTC 11168-BN148]
gi|407942353|ref|YP_006857995.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni
PT14]
gi|419650629|ref|ZP_14181843.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 2008-1025]
gi|419662216|ref|ZP_14192522.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 2008-831]
gi|419676025|ref|ZP_14205273.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 110-21]
gi|419676640|ref|ZP_14205807.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 87330]
gi|419680753|ref|ZP_14209607.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 140-16]
gi|419691020|ref|ZP_14219205.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1893]
gi|419691589|ref|ZP_14219704.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1928]
gi|38503224|sp|Q9PNX7.1|YIDC_CAMJE RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|85838860|gb|EAQ56128.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88191227|gb|EAQ95199.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
84-25]
gi|112360283|emb|CAL35078.1| putative membrane protein [Campylobacter jejuni subsp. jejuni NCTC
11168 = ATCC 700819]
gi|284926191|gb|ADC28543.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni IA3902]
gi|315928512|gb|EFV07816.1| 60Kd inner membrane family protein [Campylobacter jejuni subsp.
jejuni 305]
gi|380628231|gb|EIB46556.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 2008-1025]
gi|380638642|gb|EIB56181.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 2008-831]
gi|380650911|gb|EIB67511.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 110-21]
gi|380655844|gb|EIB72140.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 87330]
gi|380659747|gb|EIB75714.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 140-16]
gi|380667871|gb|EIB83273.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1893]
gi|380671987|gb|EIB87175.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni 1928]
gi|401781352|emb|CCK67055.1| inner membrane protein translocase component YidC [Campylobacter
jejuni subsp. jejuni NCTC 11168-BN148]
gi|407906191|gb|AFU43020.1| membrane protein insertase [Campylobacter jejuni subsp. jejuni
PT14]
Length = 528
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 126/255 (49%), Gaps = 42/255 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + +G+AI+++T+IV+ FPLT K + S ++
Sbjct: 314 WFTFIAKPMFEFLNFLHQYIGN------WGWAIVVMTLIVRIILFPLTYKSMISMNKLKD 367
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K I+ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 368 LAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 426
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L S Y +LP+L+ +
Sbjct: 427 ELKAAPWAFWIHDL------------------------------SVMDPYFILPILMGAT 456
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ ++I DP M++ + FLP++ +F ++ P+GL+LYWF NNL S QQ W
Sbjct: 457 MFLQ-QLITPMTIQDP-MQAK--IMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQ-W 511
Query: 333 LQKFGGAKDPMKQFS 347
+ AK+ K+ S
Sbjct: 512 VINKIFAKEHHKKTS 526
>gi|407770846|ref|ZP_11118212.1| membrane protein insertase [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407286229|gb|EKF11719.1| membrane protein insertase [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 571
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 113/218 (51%), Gaps = 17/218 (7%)
Query: 116 HVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLET 175
H+ +G +I++ TV+VKA +PL K +S AM+ L PQ+ ++E++ D++R Q E
Sbjct: 365 HLVGNFGVSILIFTVLVKAVMYPLANKSYKSMSAMKKLQPQITKMREQFKDDRQRQQQEM 424
Query: 176 ARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAAR 235
LYK INP +GCLP + IPV+ LY+ L V E F WI L+ P
Sbjct: 425 MALYKREKINPASGCLPIVVQIPVFFALYKVLF-VNIEMRHAPFFGWIQDLSAP------ 477
Query: 236 QNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
+ + + LF + PP V P+++ V+ ++ K+ N P +
Sbjct: 478 -DPTSLFNLFGLIPWDPP----QMLMIGVWPLIMGVTMFLQQKL-----NPAPADPTQAK 527
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
+ FLPL+ + S P+GL +YW NNLLS AQQ ++
Sbjct: 528 IMMFLPLIFTFMLASFPAGLVIYWAWNNLLSIAQQRYI 565
>gi|283956364|ref|ZP_06373844.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
1336]
gi|283792084|gb|EFC30873.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
1336]
Length = 528
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 123/255 (48%), Gaps = 42/255 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + +G+AI+++T+IV+ FPLT K + S ++
Sbjct: 314 WFTFIAKPMFEFLNFLHQYIGN------WGWAIVVMTLIVRIILFPLTYKSMISMNKLKD 367
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K I+ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 368 LAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 426
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L S Y +LP+L+ +
Sbjct: 427 ELKAAPWAFWIHDL------------------------------SVMDPYFILPILMGAT 456
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ ++I DP + FLP++ +F ++ P+GL+LYWF NNL S QQ W
Sbjct: 457 MFLQ-QLITPMTIQDP---MQAKIMKFLPVIFTFFFITFPAGLTLYWFANNLCSLVQQ-W 511
Query: 333 LQKFGGAKDPMKQFS 347
+ AK+ K+ S
Sbjct: 512 VINKIFAKEHHKKTS 526
>gi|347731633|ref|ZP_08864725.1| 60Kd inner membrane family protein [Desulfovibrio sp. A2]
gi|347519583|gb|EGY26736.1| 60Kd inner membrane family protein [Desulfovibrio sp. A2]
Length = 536
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 28/215 (13%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG AIILLTV++K +PL+ K +S M+ L P ++ ++E++ D+E++ E RLYK
Sbjct: 348 YGVAIILLTVVIKLVFWPLSHKSYKSMEQMKKLQPMLQKLREKHGDDREKMNEEMMRLYK 407
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP L IPV+ GLY+AL N + ++ S
Sbjct: 408 TYKVNPAGGCLPMLVQIPVFFGLYQALLNAIE----------------------LRHASF 445
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
++ L PF D S Y + P+++ + ++Q P + + F+
Sbjct: 446 VTHL-PFTDMVWLADLSAKDPYYITPIVMGATM-----LLQQKLTPAPGDPTQAKIMMFM 499
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++ + LS PSGL +YW NN+LS AQQ W+ +
Sbjct: 500 PVVFTFMFLSFPSGLVVYWLCNNVLSIAQQWWMLR 534
>gi|144899247|emb|CAM76111.1| 60 kDa inner membrane insertion protein [Magnetospirillum
gryphiswaldense MSR-1]
Length = 575
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 122/248 (49%), Gaps = 24/248 (9%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W +T +LK++ G+ + G AI+ LTV++K FPL K S M+
Sbjct: 346 WFYFLTKPFFYLLKMMNSGLGNM------GLAILALTVLIKGIMFPLANKSYASMSKMKL 399
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L PQVKA+QER+ D+ R+Q E LYK +NP++GCLP L IPV+ LY+ L VA
Sbjct: 400 LQPQVKALQERFGDDKVRLQQEMMALYKKEKVNPVSGCLPILIQIPVFFALYKVLF-VAI 458
Query: 213 EGLLTEGFFWIPSLAG--PTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLV 270
E + WI L+ PTTI LF + P L V P+++
Sbjct: 459 EMRHAPFYGWIKDLSAQDPTTIMN---------LFGLIPWDPALYLPAFLHIGVWPLIMG 509
Query: 271 VSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+ ++ K+ N P + FLP++ + +GL +YW +N+LS AQQ
Sbjct: 510 ATMWLQQKL-----NPQPLDPVQAKMMMFLPVVFTFMLGQFAAGLVIYWAWSNILSIAQQ 564
Query: 331 -VWLQKFG 337
V ++K+G
Sbjct: 565 WVIMRKYG 572
>gi|442325062|ref|YP_007365083.1| hypothetical protein MYSTI_08133 [Myxococcus stipitatus DSM 14675]
gi|441492704|gb|AGC49399.1| hypothetical protein MYSTI_08133 [Myxococcus stipitatus DSM 14675]
Length = 605
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 120/238 (50%), Gaps = 35/238 (14%)
Query: 100 VMETVLKVLKDGMSTLH-VPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVK 158
+ + K+L M H + +G AIILLTV+VK PLT + + S ++ L P+++
Sbjct: 380 IWAVICKLLLTIMKFFHGLTGNWGVAIILLTVVVKMVLLPLTYRSMVSMEEVKKLQPRME 439
Query: 159 AIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTE 218
I+++YA ++E+ LE +LY+ A +NPL GCLP L +PVWI L+ AL N D L E
Sbjct: 440 EIRKKYADNREQQNLEIMKLYQEAKVNPLGGCLPLLIQMPVWIALFTALRNSFD--LYGE 497
Query: 219 GFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVK 278
FF GP W D Y LL ++ +S+
Sbjct: 498 PFF------GPI-------------------------WRD-LTYKDPTYLLPLALGVSMI 525
Query: 279 IIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKF 336
I Q Q + ++ +T F+P + L P+GLSLY FTNN+LS AQQ L+K+
Sbjct: 526 ITQKMQPQMMDATQAKIMTWFVPGIFTLTLLQYPAGLSLYIFTNNILSIAQQYGLRKW 583
>gi|261378187|ref|ZP_05982760.1| membrane protein insertase, YidC/Oxa1 family [Neisseria cinerea
ATCC 14685]
gi|269145655|gb|EEZ72073.1| membrane protein insertase, YidC/Oxa1 family [Neisseria cinerea
ATCC 14685]
Length = 545
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 103/214 (48%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII+LT+IVKA +PLT S MR+ AP+++AI+E+Y D+ Q +LYK
Sbjct: 354 WGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDRMAQQQAMMQLYK 413
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY AL ++ RQ
Sbjct: 414 DEKINPLGGCLPMLLQIPVFIGLYWALF---------------------ASVELRQ---- 448
Query: 241 ISWLFPFVDGHPPLGW----SDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P LGW S + Y +LPV++ V+ + Q+ N P +
Sbjct: 449 ----------APWLGWITDLSRSDPYYILPVIMAVTMF-----AQTFLNPPPTDPMQAKM 493
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ P+GL LYW NNLL+ AQQ
Sbjct: 494 MKIMPLVFSAMFFFFPAGLVLYWVVNNLLTIAQQ 527
>gi|147679254|ref|YP_001213469.1| preprotein translocase subunit YidC [Pelotomaculum
thermopropionicum SI]
gi|146275351|dbj|BAF61100.1| preprotein translocase subunit YidC [Pelotomaculum
thermopropionicum SI]
Length = 222
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 122/243 (50%), Gaps = 37/243 (15%)
Query: 94 LSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSL 153
S I N M +L L +P +YG AIILLT+IVK +PL+ KQ++S +AM+ +
Sbjct: 4 FSSIVNGMTWLLNWLYQLTVAAGLP-SYGIAIILLTIIVKMVLYPLSHKQMKSMLAMQQI 62
Query: 154 APQVKAIQERYAG-DQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
P+VK IQE++ D +++Q LY+ +NP AGCLP L +P+ I LYR+L N
Sbjct: 63 QPKVKEIQEKWKNKDPKKMQQAIMELYREHNVNPAAGCLPLLIQMPILIALYRSLFNFPY 122
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
F W+P+L S Y +LP+L V+
Sbjct: 123 INTAHAVFLWVPNL------------------------------SVKDPYYILPILAGVT 152
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ K+ ++ +DP + + + +P+ I + A SVP+GL+LYW N+ QQ +
Sbjct: 153 TFLQSKM--TTTTSDP---TQRMMLYTMPVFIAWIAGSVPAGLALYWVVFNIGGIVQQYF 207
Query: 333 LQK 335
+ K
Sbjct: 208 INK 210
>gi|374572322|ref|ZP_09645418.1| membrane protein insertase, YidC/Oxa1 family protein
[Bradyrhizobium sp. WSM471]
gi|374420643|gb|EHR00176.1| membrane protein insertase, YidC/Oxa1 family protein
[Bradyrhizobium sp. WSM471]
Length = 615
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 115/220 (52%), Gaps = 11/220 (5%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+L+TVIVK FPL K S M+S+ PQ++A++ERY D+ + Q E +Y+
Sbjct: 391 FGISILLVTVIVKLLFFPLANKSYASMAKMKSVQPQLQALKERYPDDKVKQQQEMMEIYR 450
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INP+AGCLP + IPV+ LY+ L V E F WI L+ P N
Sbjct: 451 KEKINPVAGCLPVVIQIPVFFSLYKVLF-VTIEMRHAPFFGWIKDLSAPDP----TNLFT 505
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+ L PF P+ + A + P+++ ++ + +K+ N P + Q + N++
Sbjct: 506 LFGLIPFDPTTIPV-FGHYLALGIWPIIMGITMWFQMKL-----NPTPPDPTQQMIFNWM 559
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
PL+ + P+GL +YW NN LS QQ ++ + G K
Sbjct: 560 PLIFTFMLAGFPAGLVIYWAWNNTLSVLQQSFIMRRNGVK 599
>gi|85709448|ref|ZP_01040513.1| putative inner membrane protein translocase component YidC
[Erythrobacter sp. NAP1]
gi|85688158|gb|EAQ28162.1| putative inner membrane protein translocase component YidC
[Erythrobacter sp. NAP1]
Length = 595
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 118/214 (55%), Gaps = 20/214 (9%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLTVI++ FP+ +KQ S M+++ P++KAIQERY D++ Q + LYK
Sbjct: 369 FGVAIILLTVIIRGLLFPIAQKQFASMAQMKAVQPKMKAIQERYKDDKQTQQQKIMELYK 428
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPLAGCLP L IP++ LY+ L + + E F ++ L+ P A N G
Sbjct: 429 EEKVNPLAGCLPLLIQIPIFFALYKVLYLAIE--MRHEPFLYMSDLSAPDP-AKILNLFG 485
Query: 241 ISWLFPF-VDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
L P+ V G +G +L VLL V+ +++ K+ S+ DP Q + N
Sbjct: 486 ---LLPYDVPGFLGIG--------ILAVLLGVTMWLTFKLNPSAM--DP---VQQQIFNL 529
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
+P + + +GL +YW T+N+L+ AQQ +L
Sbjct: 530 MPWFLMFVMAPFAAGLLIYWVTSNVLTLAQQSYL 563
>gi|148926121|ref|ZP_01809807.1| putative membrane protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|145845600|gb|EDK22692.1| putative membrane protein [Campylobacter jejuni subsp. jejuni
CG8486]
Length = 530
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 41/253 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + +G+AI+++T+IV+ FPLT K + S ++
Sbjct: 314 WFTFIAKPMFEFLNFLYQYIGN------WGWAIVVMTLIVRIILFPLTYKSMISMNKLKD 367
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K I+ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 368 LAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 426
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L S Y +LP+L+ +
Sbjct: 427 ELKAAPWAFWIHDL------------------------------SVMDPYFILPILMGAT 456
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ ++I DP + FLP++ +F ++ P+GL+LYWF NNL S QQ
Sbjct: 457 MFLQ-QLITPMTIQDP---MQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQWV 512
Query: 333 LQKFGGAKDPMKQ 345
+ K + KQ
Sbjct: 513 INKIFAKEYHKKQ 525
>gi|420484848|ref|ZP_14983466.1| inner membrane protein oxaA [Helicobacter pylori Hp P-4]
gi|420515342|ref|ZP_15013805.1| inner membrane protein oxaA [Helicobacter pylori Hp P-4c]
gi|420517043|ref|ZP_15015498.1| inner membrane protein oxaA [Helicobacter pylori Hp P-4d]
gi|393102983|gb|EJC03546.1| inner membrane protein oxaA [Helicobacter pylori Hp P-4]
gi|393123641|gb|EJC24109.1| inner membrane protein oxaA [Helicobacter pylori Hp P-4c]
gi|393124857|gb|EJC25323.1| inner membrane protein oxaA [Helicobacter pylori Hp P-4d]
Length = 547
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 107/215 (49%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IV+ +PL+ K + S ++ LAP++K +QE+Y + +++Q +LYK
Sbjct: 353 WGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKSEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWVLWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|334132416|ref|ZP_08506173.1| Inner membrane protein OxaA [Methyloversatilis universalis FAM5]
gi|333442382|gb|EGK70352.1| Inner membrane protein OxaA [Methyloversatilis universalis FAM5]
Length = 531
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 118/256 (46%), Gaps = 46/256 (17%)
Query: 75 DAAVSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKA 134
DA D V + WL I + M VL+ L + +G+AIILLT+++KA
Sbjct: 307 DAMAPGLDYVV----DYGWLKIIASPMHWVLEKLHGLVGN------WGWAIILLTILIKA 356
Query: 135 ATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTL 194
FPL+ +S +R + P+++ I+ER+A D+ R+Q E LYK INPL GCLP L
Sbjct: 357 LFFPLSAASYKSMAKLRLVTPRMQQIKERHANDRVRMQQEMMELYKTEKINPLGGCLPIL 416
Query: 195 ATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPL 254
IPV+I LY L + +N I W+ P
Sbjct: 417 VQIPVFIALYWVLLGSVE----------------------MRNAPWIGWITDLSIKDP-- 452
Query: 255 GWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSG 314
+ VLP+++ V+ ++ K+ N P + FLP++ L P+G
Sbjct: 453 -------FFVLPIIMGVTMFVQTKL-----NPTPPDPIQAKVMLFLPVVFTGMFLFFPAG 500
Query: 315 LSLYWFTNNLLSTAQQ 330
L LYW NN+LS AQQ
Sbjct: 501 LVLYWTVNNILSIAQQ 516
>gi|221218111|ref|ZP_03589577.1| inner membrane protein OxaA [Borrelia burgdorferi 72a]
gi|225548690|ref|ZP_03769737.1| inner membrane protein OxaA [Borrelia burgdorferi 94a]
gi|221192059|gb|EEE18280.1| inner membrane protein OxaA [Borrelia burgdorferi 72a]
gi|225370720|gb|EEH00156.1| inner membrane protein OxaA [Borrelia burgdorferi 94a]
Length = 544
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 119/235 (50%), Gaps = 24/235 (10%)
Query: 101 METVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAI 160
M+ V++V D + +G +II LT++V+ FPLT K ++ + L P++K +
Sbjct: 329 MQMVMQVFYDVIPN------WGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKEL 382
Query: 161 QERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF 220
Q ++ D +++ E RLYK G+NPL GCLP + +P++ LY ++N+ L G
Sbjct: 383 QAKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNL----FLLRGA 438
Query: 221 FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII 280
+IP +I G F + W+D +LP +++ +Q S I
Sbjct: 439 SFIPGWIDDLSIGDSVYHFGYKLYF--------VSWTDI---RILPFIMMFTQLGST--I 485
Query: 281 QSSQNNDPNMKSSQALTNF-LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
SS + N+ + Q F +P+M + ++PSGL +YW T N+ + QQ +++
Sbjct: 486 VSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIK 540
>gi|386398879|ref|ZP_10083657.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
[Bradyrhizobium sp. WSM1253]
gi|385739505|gb|EIG59701.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
[Bradyrhizobium sp. WSM1253]
Length = 615
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 115/220 (52%), Gaps = 11/220 (5%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+L+TVIVK FPL K S M+S+ PQ++A++ERY D+ + Q E +Y+
Sbjct: 391 FGISILLVTVIVKLLFFPLANKSYASMAKMKSVQPQLQALKERYPDDKVKQQQEMMEIYR 450
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INP+AGCLP + IPV+ LY+ L V E F WI L+ P N
Sbjct: 451 KEKINPVAGCLPVVIQIPVFFSLYKVLF-VTIEMRHAPFFGWIKDLSAPDP----TNLFT 505
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+ L PF P+ + A + P+++ ++ + +K+ N P + Q + N++
Sbjct: 506 LFGLIPFDPTTIPV-FGHYLALGIWPIIMGITMWFQMKL-----NPTPPDPTQQMIFNWM 559
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
PL+ + P+GL +YW NN LS QQ ++ + G K
Sbjct: 560 PLIFTFMLAGFPAGLVIYWAWNNTLSVLQQSFIMRRNGVK 599
>gi|419641564|ref|ZP_14173454.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23357]
gi|380616673|gb|EIB35864.1| putative inner membrane protein translocase component YidC
[Campylobacter jejuni subsp. jejuni LMG 23357]
Length = 528
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 123/255 (48%), Gaps = 42/255 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + +G+AI+++T+IV+ FPLT K + S ++
Sbjct: 314 WFTFIAKPMFEFLNFLHQYIGN------WGWAIVVMTLIVRIILFPLTYKSMISMNKLKD 367
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K I+ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 368 LAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 426
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L S Y +LP+L+ +
Sbjct: 427 ELKAAPWAFWIHDL------------------------------SVMDPYFILPILMGAT 456
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ ++I DP + FLP++ +F ++ P+GL+LYWF NNL S QQ W
Sbjct: 457 MFLQ-QLITPMTIQDP---MQAKIMKFLPVIFTFFFITFPAGLTLYWFANNLCSLVQQ-W 511
Query: 333 LQKFGGAKDPMKQFS 347
+ AK+ K+ S
Sbjct: 512 VINKIFAKEHHKKTS 526
>gi|374316291|ref|YP_005062719.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
protein [Sphaerochaeta pleomorpha str. Grapes]
gi|359351935|gb|AEV29709.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
protein [Sphaerochaeta pleomorpha str. Grapes]
Length = 609
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 124/245 (50%), Gaps = 26/245 (10%)
Query: 90 NSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMA 149
+S WL +E LK+L + + +P YG II+LT ++K +P++KK ++S+
Sbjct: 357 SSSWLGW----LENFLKILLNWFYKI-IP-NYGVGIIILTFLLKLVLYPISKKGMDSTAK 410
Query: 150 MRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSN 209
M +L P+++ I+ +Y + + ETA LYK INP+ GCLP L P+ I Y L+
Sbjct: 411 MSALGPKMEEIKAKYPDNPAKQNEETAALYKKEKINPMGGCLPMLVQFPILIAFYGLLNK 470
Query: 210 VAD--EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPV 267
+ + G WIP L+ P T+ ++FPF P +G +LP+
Sbjct: 471 HFELRGAMFIPG--WIPDLSMPDTV----------FMFPFT--IPFIGNE----LHLLPI 512
Query: 268 LLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLST 327
+ VS S+KI Q++ + +T +PLM + S PSGL LYW N LS
Sbjct: 513 IYTVSMIYSMKITQNASTAGSQQGMMKFMTYGMPLMFFFVLYSAPSGLILYWSVMNALSI 572
Query: 328 AQQVW 332
QQ++
Sbjct: 573 FQQMY 577
>gi|338175243|ref|YP_004652053.1| inner membrane protein oxaA [Parachlamydia acanthamoebae UV-7]
gi|336479601|emb|CCB86199.1| inner membrane protein oxaA [Parachlamydia acanthamoebae UV-7]
Length = 840
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 124/250 (49%), Gaps = 28/250 (11%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLH-VPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMR 151
W S I+ L +L M H V ++ F+IILLTV ++ +PL +S + M+
Sbjct: 591 WFSFISEPFAKFLFIL---MQFFHSVTGSWAFSIILLTVALRVMLYPLNAWSTKSMLRMQ 647
Query: 152 SLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVA 211
+AP+VKAIQER+ D ++ QLE LYK G+NP++GCLP L +P IG++ L +
Sbjct: 648 QIAPEVKAIQERHKKDPKKAQLEIMNLYKERGVNPVSGCLPLLIQMPFLIGMFDLLKSTF 707
Query: 212 DEGLLTEGFF--WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLL 269
+ L F WI +L P + + Q PF+ + +LP+LL
Sbjct: 708 E--LRGASFIPGWIDNLTAPDVLFSWQTP------LPFIGNQ----------FHLLPILL 749
Query: 270 VVSQYISVKIIQSSQNNDPNM----KSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLL 325
V ++ + + ++ + M + + + N + ++ PSGL++YW ++ LL
Sbjct: 750 GVVMWLQQRFMSAAPKDANQMTEQERQQRVMGNMMAVVFTVMFYQFPSGLNIYWLSSMLL 809
Query: 326 STAQQVWLQK 335
QQ W+ K
Sbjct: 810 GMLQQWWMGK 819
>gi|56461737|ref|YP_157018.1| preprotein translocase subunit YidC [Idiomarina loihiensis L2TR]
gi|56180747|gb|AAV83469.1| Preprotein translocase subunit YidC [Idiomarina loihiensis L2TR]
Length = 530
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 106/212 (50%), Gaps = 37/212 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIIL TVIVKA FPLTK Q S MR L P++ A++ERY D++++ +LYK
Sbjct: 338 WGLAIILTTVIVKALLFPLTKAQYVSMAKMRMLQPKMTALRERYGDDRQKMSGAMMKLYK 397
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF-FWIPSLAGPTTIAARQNGS 239
+NPL GCLP L +P+++ LY L + L F FWI L
Sbjct: 398 EEKVNPLGGCLPMLLQLPIFLALYWVLLESVE--LRHSAFVFWIQDL------------- 442
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
S Y +LP+L+ S ++ ++ +Q + DP Q L +
Sbjct: 443 -----------------STKDPYYILPILMGASMFL-MQRLQPTPTADP---MQQKLFQY 481
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
+P++ F L PSGL LYW +NL++ AQ +
Sbjct: 482 MPVIFTVFFLWFPSGLVLYWLVSNLITIAQML 513
>gi|310644873|ref|YP_003949632.1| insertase [Paenibacillus polymyxa SC2]
gi|309249824|gb|ADO59391.1| Membrane protein insertase, YidC/Oxa1 family [Paenibacillus
polymyxa SC2]
gi|392305513|emb|CCI71876.1| Inner membrane protein OxaA [Paenibacillus polymyxa M1]
Length = 288
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 107/215 (49%), Gaps = 34/215 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG A+++L +IV+ PLT KQV SS AM+++ PQ+K IQ +Y ER+Q ET +L++
Sbjct: 69 YGLAVLILVIIVRTIILPLTLKQVRSSRAMQAIQPQLKEIQAKYKDTPERVQQETMKLFQ 128
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+AGCLP L +P++I LY A+ + L F W+
Sbjct: 129 ENKVNPMAGCLPLLVQMPIFIALYNAI--YYNSALRDHDFLWL----------------- 169
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
LG D F +LP+L ++ +I ++ N P Q L
Sbjct: 170 ------------QLGKPDHF--FILPILAAITTFIQTWMMM-KMNPTPQQGPMQFLLYVY 214
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++I + + + PS L LYWF +N+ + Q +L +
Sbjct: 215 PVLILFMSYNFPSALPLYWFFSNIYTIVQNYFLYR 249
>gi|291277160|ref|YP_003516932.1| hypothetical protein HMU09470 [Helicobacter mustelae 12198]
gi|290964354|emb|CBG40204.1| putative inner-membrane protein, OxaA [Helicobacter mustelae 12198]
Length = 546
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 108/216 (50%), Gaps = 37/216 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LTVIVK +PL+ K + S ++ L P++K IQE+Y GD +++Q+ +LYK
Sbjct: 349 WGWAIITLTVIVKLVLYPLSYKGMVSMQKLKDLTPKMKEIQEKYKGDPQKLQMHMMQLYK 408
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF-FWIPSLAGPTTIAARQNGS 239
G NP+ GCLP L IP++ +YR L N + L + F WI L
Sbjct: 409 KHGANPMGGCLPLLIQIPIFYAIYRVLYNSVE--LKSAPFILWIQDL------------- 453
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
S Y VLP+L+ VS Y+ + + + DP +
Sbjct: 454 -----------------SVMDPYFVLPILMGVSMYVQ-QALTPNTFTDP---IQAKVFKM 492
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
LP++ F + P+GL LYW NN+LS QQ+ + K
Sbjct: 493 LPVVFTIFLIFFPAGLVLYWTINNILSIFQQLSINK 528
>gi|403236803|ref|ZP_10915389.1| OxaA-like protein precursor [Bacillus sp. 10403023]
Length = 258
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 110/215 (51%), Gaps = 40/215 (18%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYA----GDQERIQLETA 176
YG AII++T++++ A PL KQ +SS AM+++ P++KA++E+Y+ Q+++Q ET
Sbjct: 60 YGLAIIIVTLLIRFALLPLMIKQTKSSKAMQAIQPELKALREKYSSKDQATQQKLQQETM 119
Query: 177 RLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ 236
+L++ G+NPLAGC P L +P+ IG Y A+ + + F W
Sbjct: 120 QLFQKHGVNPLAGCFPLLIQMPILIGFYHAIMRTRE--IAEHNFLWF------------- 164
Query: 237 NGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
LG SD Y +LP++ V+ +I KI N+P M L
Sbjct: 165 ----------------DLGESD--PYYILPIVAGVTTFIQQKITMMGMENNPQMAMMLWL 206
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
+P+MI FA++ P+ L+LYW NL Q +
Sbjct: 207 ---MPIMIVVFAINFPAALALYWVVGNLFMIVQTI 238
>gi|38502849|sp|O51398.1|YIDC_BORBU RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
Length = 544
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 119/235 (50%), Gaps = 24/235 (10%)
Query: 101 METVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAI 160
M+ V++V D + +G +II LT++V+ FPLT K ++ + L P++K +
Sbjct: 329 MQMVMQVFYDVIPN------WGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKEL 382
Query: 161 QERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF 220
Q ++ D +++ E RLYK G+NPL GCLP + +P++ LY ++N+ L G
Sbjct: 383 QAKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNL----FLLRGA 438
Query: 221 FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII 280
+IP +I G F + W+D +LP +++ +Q S I
Sbjct: 439 SFIPGWIDDLSIGDSVYHFGYKLYF--------VSWTDI---RILPFIMMFTQLGST--I 485
Query: 281 QSSQNNDPNMKSSQALTNF-LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
SS + N+ + Q F +P+M + ++PSGL +YW T N+ + QQ +++
Sbjct: 486 VSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIK 540
>gi|282890627|ref|ZP_06299150.1| hypothetical protein pah_c022o237 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499624|gb|EFB41920.1| hypothetical protein pah_c022o237 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 840
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 124/250 (49%), Gaps = 28/250 (11%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLH-VPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMR 151
W S I+ L +L M H V ++ F+IILLTV ++ +PL +S + M+
Sbjct: 591 WFSFISEPFAKFLFIL---MQFFHSVTGSWAFSIILLTVALRVMLYPLNAWSTKSMLRMQ 647
Query: 152 SLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVA 211
+AP+VKAIQER+ D ++ QLE LYK G+NP++GCLP L +P IG++ L +
Sbjct: 648 QIAPEVKAIQERHKKDPKKAQLEIMNLYKERGVNPVSGCLPLLIQMPFLIGMFDLLKSTF 707
Query: 212 DEGLLTEGFF--WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLL 269
+ L F WI +L P + + Q PF+ + +LP+LL
Sbjct: 708 E--LRGASFIPGWIDNLTAPDVLFSWQTP------LPFIGNQ----------FHLLPILL 749
Query: 270 VVSQYISVKIIQSSQNNDPNM----KSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLL 325
V ++ + + ++ + M + + + N + ++ PSGL++YW ++ LL
Sbjct: 750 GVVMWLQQRFMSAAPKDANQMTEQERQQRVMGNMMAVVFTVMFYQFPSGLNIYWLSSMLL 809
Query: 326 STAQQVWLQK 335
QQ W+ K
Sbjct: 810 GMLQQWWMGK 819
>gi|239832645|ref|ZP_04680974.1| Inner membrane protein oxaA [Ochrobactrum intermedium LMG 3301]
gi|239824912|gb|EEQ96480.1| Inner membrane protein oxaA [Ochrobactrum intermedium LMG 3301]
Length = 624
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+++TV++K FPL K +S M+ + P++ I+E+YA D+ R Q E +LYK
Sbjct: 402 FGVAILVVTVLLKGLFFPLANKSYKSMARMKLVQPKLTEIREKYADDKMRQQQEMMKLYK 461
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPLAGC P L IPV+ LY+ L V E F WI LA P +
Sbjct: 462 EEKINPLAGCWPVLVQIPVFFALYKVLY-VTIEMRHAPFFGWIQDLAAPDPTSL----FN 516
Query: 241 ISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
+ L PF H F + V P+L+ ++ ++ +++ N P + A+ +
Sbjct: 517 LFGLLPFAVPH--------FLMIGVWPLLMGITMFLQMRM-----NPTPPDPTQAAIFTW 563
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+P++ + S P+GL +YW NNLLS QQ + K G K
Sbjct: 564 MPVIFTFMLASFPAGLVIYWAWNNLLSITQQGIIMKRQGVK 604
>gi|392389448|ref|YP_006426051.1| membrane protein insertase [Ornithobacterium rhinotracheale DSM
15997]
gi|390520526|gb|AFL96257.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
protein [Ornithobacterium rhinotracheale DSM 15997]
Length = 604
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 140/285 (49%), Gaps = 38/285 (13%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAG--DQERIQLETARL 178
YG+ I LLT++VK T P+ KQ + S MR L P ++AI E+Y G +Q + Q ET L
Sbjct: 355 YGWVIALLTIVVKLITSPIMYKQYKQSAMMRVLKPDMEAINEKYKGPENQMKRQQETMNL 414
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNG 238
Y+ AG+NPLAGCLP L IP++ L+ NV L +GF W L +I
Sbjct: 415 YRTAGVNPLAGCLPALLQIPIFYALFNFFPNVIQ--LRGKGFLWADDLTAYDSIMH---- 468
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQS-SQNNDPNMKSSQALT 297
+ + PF H L FA L+ V +V+ S ++Q+ Q P+M+ +
Sbjct: 469 --LPFNIPFYGNHVSL-----FA-LMYVVTMVIYFKFSGNMMQTPKQEGMPDMR---FMM 517
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDERLDI 357
+P+M +F S SGLS Y+F +N ++ +++ K+ M D ++
Sbjct: 518 YIMPIMFIFFLNSYASGLSWYYFVSNAINIGLVLFI------KNVM--IDDAKIHAKIQS 569
Query: 358 NKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRRQQR 402
NK P +K+++ EKL + KQ +EQ+ + Q+
Sbjct: 570 NKQNP---KKRKKSKWQEKL-------DQAMKQAQEQQRLKNNQK 604
>gi|224533541|ref|ZP_03674130.1| inner membrane protein OxaA [Borrelia burgdorferi CA-11.2a]
gi|387827350|ref|YP_005806632.1| inner membrane protein OxaA [Borrelia burgdorferi N40]
gi|224513214|gb|EEF83576.1| inner membrane protein OxaA [Borrelia burgdorferi CA-11.2a]
gi|312149425|gb|ADQ29496.1| inner membrane protein OxaA [Borrelia burgdorferi N40]
Length = 544
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 119/235 (50%), Gaps = 24/235 (10%)
Query: 101 METVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAI 160
M+ V++V D + +G +II LT++V+ FPLT K ++ + L P++K +
Sbjct: 329 MQMVMQVFYDVIPN------WGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKEL 382
Query: 161 QERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF 220
Q ++ D +++ E RLYK G+NPL GCLP + +P++ LY ++N+ L G
Sbjct: 383 QAKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNL----FLLRGA 438
Query: 221 FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII 280
+IP +I G F + W+D +LP +++ +Q S I
Sbjct: 439 SFIPGWIDDLSIGDSVYHFGYKLYF--------VSWTDI---RILPFIMMFTQLGST--I 485
Query: 281 QSSQNNDPNMKSSQALTNF-LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
SS + N+ + Q F +P+M + ++PSGL +YW T N+ + QQ +++
Sbjct: 486 VSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIK 540
>gi|218249421|ref|YP_002374953.1| inner membrane protein OxaA [Borrelia burgdorferi ZS7]
gi|226321751|ref|ZP_03797277.1| inner membrane protein OxaA [Borrelia burgdorferi Bol26]
gi|254772749|sp|B7J208.1|YIDC_BORBZ RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|218164609|gb|ACK74670.1| inner membrane protein OxaA [Borrelia burgdorferi ZS7]
gi|226232940|gb|EEH31693.1| inner membrane protein OxaA [Borrelia burgdorferi Bol26]
Length = 544
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 119/235 (50%), Gaps = 24/235 (10%)
Query: 101 METVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAI 160
M+ V++V D + +G +II LT++V+ FPLT K ++ + L P++K +
Sbjct: 329 MQMVMQVFYDVIPN------WGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKEL 382
Query: 161 QERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF 220
Q ++ D +++ E RLYK G+NPL GCLP + +P++ LY ++N+ L G
Sbjct: 383 QAKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNL----FLLRGA 438
Query: 221 FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII 280
+IP +I G F + W+D +LP +++ +Q S I
Sbjct: 439 SFIPGWIDDLSIGDSVYHFGYKLYF--------VSWTDI---RILPFIMMFTQLGST--I 485
Query: 281 QSSQNNDPNMKSSQALTNF-LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
SS + N+ + Q F +P+M + ++PSGL +YW T N+ + QQ +++
Sbjct: 486 VSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIK 540
>gi|223888963|ref|ZP_03623554.1| inner membrane protein OxaA [Borrelia burgdorferi 64b]
gi|223885779|gb|EEF56878.1| inner membrane protein OxaA [Borrelia burgdorferi 64b]
Length = 544
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 119/235 (50%), Gaps = 24/235 (10%)
Query: 101 METVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAI 160
M+ V++V D + +G +II LT++V+ FPLT K ++ + L P++K +
Sbjct: 329 MQMVMQVFYDVIPN------WGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKEL 382
Query: 161 QERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF 220
Q ++ D +++ E RLYK G+NPL GCLP + +P++ LY ++N+ L G
Sbjct: 383 QAKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNL----FLLRGA 438
Query: 221 FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII 280
+IP +I G F + W+D +LP +++ +Q S I
Sbjct: 439 SFIPGWIDDLSIGDSVYHFGYKLYF--------VSWTDI---RILPFIMMFTQLGST--I 485
Query: 281 QSSQNNDPNMKSSQALTNF-LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
SS + N+ + Q F +P+M + ++PSGL +YW T N+ + QQ +++
Sbjct: 486 VSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIK 540
>gi|205356681|ref|ZP_03223442.1| putative membrane protein [Campylobacter jejuni subsp. jejuni
CG8421]
gi|205345419|gb|EDZ32061.1| putative membrane protein [Campylobacter jejuni subsp. jejuni
CG8421]
Length = 403
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 41/253 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + +G+AI+++T+IV+ FPLT K + S ++
Sbjct: 187 WFTFIAKPMFEFLNFLHQYIEN------WGWAIVVMTLIVRIILFPLTYKSMISMNKLKD 240
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K I+ERY GD +++ + LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 241 LAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLN-AI 299
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L S Y +LP+L+ +
Sbjct: 300 ELKAAPWAFWIHDL------------------------------SVMDPYFILPILMGAT 329
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ ++I DP + FLP++ +F ++ P+GL+LYWF NNL S QQ
Sbjct: 330 MFLQ-QLITPITIQDP---MQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLVQQWV 385
Query: 333 LQKFGGAKDPMKQ 345
+ K + KQ
Sbjct: 386 INKIFVKEHHKKQ 398
>gi|419795693|ref|ZP_14321277.1| membrane protein insertase, YidC/Oxa1 family [Neisseria sicca VK64]
gi|385700214|gb|EIG30467.1| membrane protein insertase, YidC/Oxa1 family [Neisseria sicca VK64]
Length = 546
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 103/214 (48%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII+LT+IVKA +PLT S MR+ AP+++AI+E+Y D+ Q +LYK
Sbjct: 355 WGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDRMAQQQAMMQLYK 414
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY AL ++ RQ
Sbjct: 415 DEKINPLGGCLPMLLQIPVFIGLYWALF---------------------ASVELRQ---- 449
Query: 241 ISWLFPFVDGHPPLGW----SDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P LGW S + Y +LPV++ V+ + Q+ N P +
Sbjct: 450 ----------APWLGWITDLSRSDPYYILPVIMAVTMF-----AQTFLNPPPTDPMQAKM 494
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ P+GL LYW NNLL+ AQQ
Sbjct: 495 MKVMPLIFSAMFFFFPAGLVLYWVVNNLLTIAQQ 528
>gi|224532508|ref|ZP_03673133.1| inner membrane protein OxaA [Borrelia burgdorferi WI91-23]
gi|224512580|gb|EEF82956.1| inner membrane protein OxaA [Borrelia burgdorferi WI91-23]
Length = 544
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 119/235 (50%), Gaps = 24/235 (10%)
Query: 101 METVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAI 160
M+ V++V D + +G +II LT++V+ FPLT K ++ + L P++K +
Sbjct: 329 MQMVMQVFYDVIPN------WGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKEL 382
Query: 161 QERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF 220
Q ++ D +++ E RLYK G+NPL GCLP + +P++ LY ++N+ L G
Sbjct: 383 QAKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNL----FLLRGA 438
Query: 221 FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII 280
+IP +I G F + W+D +LP +++ +Q S I
Sbjct: 439 SFIPGWIDDLSIGDSVYHFGYKLYF--------VSWTDI---RILPFIMMFTQLGST--I 485
Query: 281 QSSQNNDPNMKSSQALTNF-LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
SS + N+ + Q F +P+M + ++PSGL +YW T N+ + QQ +++
Sbjct: 486 VSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIK 540
>gi|255066611|ref|ZP_05318466.1| membrane protein insertase, YidC/Oxa1 family [Neisseria sicca ATCC
29256]
gi|255049195|gb|EET44659.1| membrane protein insertase, YidC/Oxa1 family [Neisseria sicca ATCC
29256]
Length = 548
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 103/214 (48%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII+LT+IVKA +PLT S MR+ AP+++AI+E+Y D+ Q +LYK
Sbjct: 357 WGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDRMAQQQAMMQLYK 416
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY AL ++ RQ
Sbjct: 417 DEKINPLGGCLPMLLQIPVFIGLYWALF---------------------ASVELRQ---- 451
Query: 241 ISWLFPFVDGHPPLGW----SDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P LGW S + Y +LPV++ V+ + Q+ N P +
Sbjct: 452 ----------APWLGWITDLSRSDPYYILPVIMAVTMF-----AQTFLNPPPTDPMQAKM 496
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ P+GL LYW NNLL+ AQQ
Sbjct: 497 MKVMPLIFSAMFFFFPAGLVLYWVVNNLLTIAQQ 530
>gi|225552387|ref|ZP_03773327.1| inner membrane protein OxaA [Borrelia sp. SV1]
gi|225371385|gb|EEH00815.1| inner membrane protein OxaA [Borrelia sp. SV1]
Length = 544
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 119/235 (50%), Gaps = 24/235 (10%)
Query: 101 METVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAI 160
M+ V++V D + +G +II LT++V+ FPLT K ++ + L P++K +
Sbjct: 329 MQMVMQVFYDVIPN------WGLSIIFLTIVVRVLIFPLTFKGFRATAELSKLQPRMKEL 382
Query: 161 QERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF 220
Q ++ D +++ E RLYK G+NPL GCLP + +P++ LY ++N+ L G
Sbjct: 383 QVKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNL----FLLRGA 438
Query: 221 FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII 280
+IP +I G F + W+D +LP +++ +Q S I
Sbjct: 439 SFIPGWIDDLSIGDSVYHFGYKLYF--------VSWTDI---RILPFIMMFTQLGST--I 485
Query: 281 QSSQNNDPNMKSSQALTNF-LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
SS + N+ + Q F +P+M + ++PSGL +YW T N+ + QQ +++
Sbjct: 486 VSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIK 540
>gi|375311483|ref|ZP_09776738.1| membrane protein insertase, yidc/oxa1 family [Paenibacillus sp.
Aloe-11]
gi|375076663|gb|EHS54916.1| membrane protein insertase, yidc/oxa1 family [Paenibacillus sp.
Aloe-11]
Length = 288
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 34/215 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG A+++L +IV+ PLT KQV SS AM+++ PQ+K IQ +Y ER+Q ET +L++
Sbjct: 69 YGLAVLILVIIVRTIILPLTLKQVRSSKAMQAIQPQLKEIQAKYKDTPERVQQETMKLFQ 128
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+AGCLP L +P++I LY A+ + L F W+
Sbjct: 129 ENKVNPMAGCLPLLVQMPIFIALYNAI--YYNSALRDHDFLWL----------------- 169
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
LG D F +LP+L ++ ++ ++ N P Q L
Sbjct: 170 ------------QLGKPDHF--FILPILAAITTFVQTWMMMKL-NPTPQQGPMQFLLYVY 214
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++I + + + PS L LYWF +N+ + Q +L +
Sbjct: 215 PVLILFMSYNFPSALPLYWFYSNIYTIIQNYFLYR 249
>gi|387826087|ref|YP_005805540.1| inner membrane protein OxaA [Borrelia burgdorferi JD1]
gi|312148357|gb|ADQ31016.1| inner membrane protein OxaA [Borrelia burgdorferi JD1]
Length = 544
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 119/235 (50%), Gaps = 24/235 (10%)
Query: 101 METVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAI 160
M+ V++V D + +G +II LT++V+ FPLT K ++ + L P++K +
Sbjct: 329 MQMVMQVFYDVIPN------WGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPRMKEL 382
Query: 161 QERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF 220
Q ++ D +++ E RLYK G+NPL GCLP + +P++ LY ++N+ L G
Sbjct: 383 QAKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNL----FLLRGA 438
Query: 221 FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII 280
+IP +I G F + W+D +LP +++ +Q S I
Sbjct: 439 SFIPGWIDDLSIGDSVYHFGYKLYF--------VSWTDI---RILPFIMMFTQLGST--I 485
Query: 281 QSSQNNDPNMKSSQALTNF-LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
SS + N+ + Q F +P+M + ++PSGL +YW T N+ + QQ +++
Sbjct: 486 VSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIK 540
>gi|103485502|ref|YP_615063.1| putative inner membrane protein translocase component YidC
[Sphingopyxis alaskensis RB2256]
gi|98975579|gb|ABF51730.1| 60 kDa inner membrane insertion protein [Sphingopyxis alaskensis
RB2256]
Length = 584
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 18/221 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+ LT+I++ FP+ +Q S MR + P++KA+QERY D+ R+Q E +LYK
Sbjct: 376 FGLAIMALTLIIRLLMFPIANRQFSSMAQMRVVQPKMKALQERYKDDKPRMQQELMKLYK 435
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPLAGCLP + IP++ LY+ L +A E WI L+ P +
Sbjct: 436 DEKINPLAGCLPIVIQIPIFYALYKVLM-LAIEMRHQPFILWIKDLSAPDPLHILN---- 490
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
LF + PP A +L V+L V+ ++ ++ N P + +
Sbjct: 491 ---LFGLLPFTPP----SILAIGLLAVILGVTMWLQFRL-----NPAPADPVQAQVFKIM 538
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAK 340
P + + +GL LYW TNN+LS QQ W+ +KF K
Sbjct: 539 PWLFMFIMAPFAAGLLLYWITNNILSIGQQQWMYRKFPALK 579
>gi|349610298|ref|ZP_08889653.1| inner membrane protein oxaA [Neisseria sp. GT4A_CT1]
gi|348610181|gb|EGY59879.1| inner membrane protein oxaA [Neisseria sp. GT4A_CT1]
Length = 547
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 103/214 (48%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII+LT+IVKA +PLT S MR+ AP+++AI+E+Y D+ Q +LYK
Sbjct: 356 WGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDRMAQQQAMMQLYK 415
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY AL ++ RQ
Sbjct: 416 DEKINPLGGCLPMLLQIPVFIGLYWALF---------------------ASVELRQ---- 450
Query: 241 ISWLFPFVDGHPPLGW----SDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P LGW S + Y +LPV++ V+ + Q+ N P +
Sbjct: 451 ----------APWLGWITDLSRSDPYYILPVIMAVTMF-----AQTFLNPPPTDPMQAKM 495
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ P+GL LYW NNLL+ AQQ
Sbjct: 496 MKVMPLIFSAMFFFFPAGLVLYWVVNNLLTIAQQ 529
>gi|340361774|ref|ZP_08684188.1| YidC/Oxa1 family membrane protein insertase [Neisseria macacae ATCC
33926]
gi|339888194|gb|EGQ77670.1| YidC/Oxa1 family membrane protein insertase [Neisseria macacae ATCC
33926]
Length = 548
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 103/214 (48%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII+LT+IVKA +PLT S MR+ AP+++AI+E+Y D+ Q +LYK
Sbjct: 357 WGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDRMAQQQAMMQLYK 416
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY AL ++ RQ
Sbjct: 417 DEKINPLGGCLPMLLQIPVFIGLYWALF---------------------ASVELRQ---- 451
Query: 241 ISWLFPFVDGHPPLGW----SDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P LGW S + Y +LPV++ V+ + Q+ N P +
Sbjct: 452 ----------APWLGWITDLSRSDPYYILPVIMAVTMF-----AQTFLNPPPTDPMQAKM 496
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ P+GL LYW NNLL+ AQQ
Sbjct: 497 MKVMPLIFSAMFFFFPAGLVLYWVVNNLLTIAQQ 530
>gi|374329450|ref|YP_005079634.1| inner membrane protein translocase component YidC [Pseudovibrio sp.
FO-BEG1]
gi|359342238|gb|AEV35612.1| inner membrane protein translocase component YidC [Pseudovibrio sp.
FO-BEG1]
Length = 603
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 116/223 (52%), Gaps = 23/223 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+L+TVIVKA FPL K S M+ + P++ I+E+Y D+++ Q LYK
Sbjct: 381 FGIAILLVTVIVKAIFFPLANKSYVSMSRMKLVQPKMTEIREKYKDDKQKQQQAMMELYK 440
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
INPLAGCLP L IPV+ LY+ L V E F WI L+ PTTI
Sbjct: 441 TEKINPLAGCLPMLIQIPVFFSLYKVLF-VTIEMRHAPFFGWIQDLSAPDPTTIFN---- 495
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALT 297
LF + PP TF + V P+++ ++ ++ +K+ N P + Q +
Sbjct: 496 -----LFGLIPWDPP-----TFLMIGVWPLIMGITMFLQMKM-----NPAPAEPAQQMIF 540
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
N++P++ + + P+GL +YW NN LS QQ + + G K
Sbjct: 541 NWMPVIFTFMLATFPAGLVIYWAWNNTLSVLQQGVIMRRQGVK 583
>gi|345875356|ref|ZP_08827150.1| putative inner membrane protein translocase component YidC
[Neisseria weaveri LMG 5135]
gi|417958480|ref|ZP_12601394.1| putative inner membrane protein translocase component YidC
[Neisseria weaveri ATCC 51223]
gi|343966694|gb|EGV34947.1| putative inner membrane protein translocase component YidC
[Neisseria weaveri ATCC 51223]
gi|343969264|gb|EGV37481.1| putative inner membrane protein translocase component YidC
[Neisseria weaveri LMG 5135]
Length = 546
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 107/214 (50%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+IVKA +PLT S MR++AP+++A++E+Y D+ +Q +LY+
Sbjct: 355 WGWAIVLLTIIVKAVFYPLTNASYRSMAKMRAVAPRLQALKEKYGDDRMAMQQAMMQLYR 414
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY A+ +++ RQ
Sbjct: 415 DEKINPLGGCLPMLLQIPVFIGLYWAIF---------------------SSVELRQ---- 449
Query: 241 ISWLFPFVDGHPPLGW----SDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P +GW S T + +LP+++ + + IQ++ N P +
Sbjct: 450 ----------APWIGWITDLSRTDPWFILPIIMAATMF-----IQTALNPPPTDPMQAKM 494
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+P++ P+GL LYW NN+L+ AQQ
Sbjct: 495 MKIMPVIFSVMFFFFPAGLVLYWVVNNILTIAQQ 528
>gi|294630334|ref|ZP_06708894.1| conserved hypothetical protein [Streptomyces sp. e14]
gi|292833667|gb|EFF92016.1| conserved hypothetical protein [Streptomyces sp. e14]
Length = 432
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 123/227 (54%), Gaps = 20/227 (8%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L ++++ PL KQ++++ AM++L P++K IQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDKQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ-N 237
YK AG NPL+ CLP LA P + LY L+ +A + G+ LA +ARQ +
Sbjct: 96 YKEAGTNPLSSCLPILAQSPFFFALYHVLNGIASGNKI--GYINDAQLA-----SARQAH 148
Query: 238 GSGISWLFPFVDGH---PPLGWSDTFAYLV---LPVLLVVSQYISVKIIQSSQNND---- 287
G F+DG LG S T +V + VL+ SQ+ + + + ++N D
Sbjct: 149 IFGAPLAAKFLDGADTVAKLGASLTDVRVVTALMIVLMSASQFYTQRQLM-TKNVDTTVK 207
Query: 288 -PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P+M +F + P G+ +YW T N+ + QQ+++
Sbjct: 208 TPFMQQQKMLMYVFPIMFAFFGIRFPVGVLVYWLTTNVWTMGQQMYV 254
>gi|254473802|ref|ZP_05087197.1| 60 kDa inner membrane insertion protein [Pseudovibrio sp. JE062]
gi|211957188|gb|EEA92393.1| 60 kDa inner membrane insertion protein [Pseudovibrio sp. JE062]
Length = 603
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 116/223 (52%), Gaps = 23/223 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+L+TVIVKA FPL K S M+ + P++ I+E+Y D+++ Q LYK
Sbjct: 381 FGIAILLVTVIVKAIFFPLANKSYVSMSRMKLVQPKMTEIREKYKDDKQKQQQAMMELYK 440
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
INPLAGCLP L IPV+ LY+ L V E F WI L+ PTTI
Sbjct: 441 TEKINPLAGCLPMLIQIPVFFSLYKVLF-VTIEMRHAPFFGWIQDLSAPDPTTIFN---- 495
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALT 297
LF + PP TF + V P+++ ++ ++ +K+ N P + Q +
Sbjct: 496 -----LFGLIPWDPP-----TFLMIGVWPLIMGITMFLQMKM-----NPAPAEPAQQMIF 540
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
N++P++ + + P+GL +YW NN LS QQ + + G K
Sbjct: 541 NWMPVIFTFMLATFPAGLVIYWAWNNTLSVLQQGVIMRRQGVK 583
>gi|444311621|ref|ZP_21147226.1| membrane protein insertase [Ochrobactrum intermedium M86]
gi|443485051|gb|ELT47848.1| membrane protein insertase [Ochrobactrum intermedium M86]
Length = 610
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 115/221 (52%), Gaps = 19/221 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+++TV++K FPL K +S M+ + P++ I+E+YA D+ R Q E +LYK
Sbjct: 388 FGVAILVVTVLLKGLFFPLANKSYKSMARMKLVQPKLTEIREKYADDKMRQQQEMMKLYK 447
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPLAGC P L IPV+ LY+ L V E F WI LA P + N G
Sbjct: 448 EEKINPLAGCWPVLVQIPVFFALYKVLY-VTIEMRHAPFFGWIQDLAAPDPTSLF-NLFG 505
Query: 241 ISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
L PF H F + V P+L+ ++ ++ +++ N P + A+ +
Sbjct: 506 ---LLPFAVPH--------FLMIGVWPLLMGITMFLQMRM-----NPTPPDPTQAAIFTW 549
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+P++ + S P+GL +YW NNLLS QQ + K G K
Sbjct: 550 MPVIFTFMLASFPAGLVIYWAWNNLLSITQQGIIMKRQGVK 590
>gi|296134496|ref|YP_003641743.1| YidC/Oxa1 family membrane protein insertase [Thermincola potens JR]
gi|296033074|gb|ADG83842.1| membrane protein insertase, YidC/Oxa1 family [Thermincola potens
JR]
Length = 228
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 108/216 (50%), Gaps = 37/216 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG AIIL+TV++K PLT KQ++S + L P+VK IQE+Y D ++ Q LYK
Sbjct: 27 YGLAIILITVLIKMLLLPLTIKQMKSLKMTQQLQPKVKEIQEKYK-DPKQAQQAIMELYK 85
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL+GCLP L +P+ I LYRAL F WI +L+ I
Sbjct: 86 QYGANPLSGCLPLLLQMPIIIALYRALMKFPYTNEAHAKFLWISNLSQHDKI-------- 137
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
VLP+L V++ Y+ ++ + Q+ ++ + + +
Sbjct: 138 -----------------------VLPILAVLTTYLLQRMTTNMQD-----QTQKTMLIVM 169
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKF 336
PL IG+ ++S P+GL+LYW NL+ QQ ++ K
Sbjct: 170 PLFIGWLSMSFPAGLALYWVVTNLVGAIQQYFINKM 205
>gi|338733328|ref|YP_004671801.1| inner membrane protein oxaA [Simkania negevensis Z]
gi|336482711|emb|CCB89310.1| inner membrane protein oxaA [Simkania negevensis Z]
Length = 806
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 137/283 (48%), Gaps = 29/283 (10%)
Query: 62 LLGVAERLLFTLADAAVSS-----SDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLH 116
+G E + DA ++ + T T+ W S I+ L ++ +
Sbjct: 522 FMGPQEHTILKQVDATFTNQVTGYNPHYTETQSFHGWFSFISEPFAKFLFLIMNFF--YK 579
Query: 117 VPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETA 176
+ +++GF+IILLT++++ +PL ++S++ +++L+P++K IQ++Y D +R QLE
Sbjct: 580 ITHSWGFSIILLTIVLRIMMYPLNAWSIKSNLKLQALSPKMKKIQDKYKKDPKRQQLEMM 639
Query: 177 RLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF--WIPSLAGPTTIAA 234
+LYK NPL GCLP + +P IG++ L + L F WI +L P +
Sbjct: 640 QLYKQHKANPLGGCLPLIIQMPFLIGMFDLLKSTF--SLRGASFIPGWIDNLTAPDVL-- 695
Query: 235 RQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNND--PNMKS 292
SW +P P +G S + +LP+LL V + K++ S + K
Sbjct: 696 ------FSWSYPI----PFIGTS----FHLLPILLGVVMFFQQKLMTSKNKEEMTDQQKQ 741
Query: 293 SQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
Q + + + + PSGL++YWF++ LL QQ + K
Sbjct: 742 QQKMGSIMTIAFTVLFYKFPSGLNIYWFSSMLLQILQQWYASK 784
>gi|307717725|ref|YP_003873257.1| hypothetical protein STHERM_c00080 [Spirochaeta thermophila DSM
6192]
gi|306531450|gb|ADN00984.1| hypothetical protein STHERM_c00080 [Spirochaeta thermophila DSM
6192]
Length = 573
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 128/244 (52%), Gaps = 30/244 (12%)
Query: 93 WLSGITNV-METVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMR 151
WL GI ++ +++ + YG AIILLT+ VK FPLT K ES+ M+
Sbjct: 351 WLEGILKFFLQIFFRIIPN----------YGVAIILLTLFVKILLFPLTHKSYESASKMQ 400
Query: 152 SLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVA 211
LAP+++ ++ RY D +R+ E A LY+ G+NPL GCLP L IP++ +Y S+
Sbjct: 401 QLAPKMEEVRNRYKDDPQRMNQELALLYQKEGVNPLGGCLPLLLQIPIFFAMYGLFSSHF 460
Query: 212 DEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVV 271
D T WI L+ P ++ F F P LGW+D +LP++LVV
Sbjct: 461 DLRGATFIPGWIDDLSVPESV------------FHFDTPLPLLGWTDI---RLLPLILVV 505
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
+Q IS KI Q + ++ N Q LP++ + + P+GL +YW N+ + AQQ+
Sbjct: 506 TQIISTKITQGASSSSQN----QVFMYVLPVVFLFILYNAPAGLLVYWVAMNIFTIAQQL 561
Query: 332 WLQK 335
++ +
Sbjct: 562 YINR 565
>gi|216264429|ref|ZP_03436421.1| inner membrane protein OxaA [Borrelia burgdorferi 156a]
gi|215980902|gb|EEC21709.1| inner membrane protein OxaA [Borrelia burgdorferi 156a]
Length = 544
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 119/235 (50%), Gaps = 24/235 (10%)
Query: 101 METVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAI 160
M+ V++V D + +G +II LT++V+ FPLT K ++ + L P++K +
Sbjct: 329 MQMVMQVFYDVIPN------WGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPRMKEL 382
Query: 161 QERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF 220
Q ++ D +++ E RLYK G+NPL GCLP + +P++ LY ++N+ L G
Sbjct: 383 QVKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNL----FLLRGA 438
Query: 221 FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII 280
+IP +I G F + W+D +LP +++ +Q S I
Sbjct: 439 SFIPGWIDDLSIGDSVYHFGYKLYF--------VSWTDI---RILPFIMMFTQLGST--I 485
Query: 281 QSSQNNDPNMKSSQALTNF-LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
SS + N+ + Q F +P+M + ++PSGL +YW T N+ + QQ +++
Sbjct: 486 VSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIK 540
>gi|406929011|gb|EKD64701.1| hypothetical protein ACD_50C00322G0009, partial [uncultured
bacterium]
Length = 257
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 136/273 (49%), Gaps = 58/273 (21%)
Query: 97 ITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQ 156
ITN++ ++L TLH+PYA+GF+IILLTV ++ +PL Q++S+ M+ +AP
Sbjct: 13 ITNLLVGFYQLL----FTLHIPYAFGFSIILLTVFIRILLYPLISAQIKSAHDMQKIAPH 68
Query: 157 VKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALS-----NVA 211
+ ++E+Y D++R Q E +LYK +NP AGCLP + +P+ LY L+ N +
Sbjct: 69 LSRVKEKYKDDKKRQQEEMMKLYKEHSVNPAAGCLPLIIQLPIIWSLYNVLTKAVVLNTS 128
Query: 212 D----------------EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLG 255
D + + FF +P A P+++ G PL
Sbjct: 129 DGLSKINQVLYFDFLKIDKVWDTIFFGLPLGANPSSLM----------------GQLPL- 171
Query: 256 WSDTFAYLVLPVLLVVSQYISVKIIQ---------SSQNNDPNMKSSQALTNFLPLMIGY 306
+++P+L V Q+I K++ + +++ + Q+L F P+MIG+
Sbjct: 172 ------IILVPILTGVFQFILSKMMMPEKVPQIPGTKEDDFQAVFQKQSLYIF-PVMIGF 224
Query: 307 FALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGA 339
F+L++P GLSLYW T + QQ L G A
Sbjct: 225 FSLNLPIGLSLYWNTFTIFGILQQYLLLGPGSA 257
>gi|403068963|ref|ZP_10910295.1| stage III sporulation protein J [Oceanobacillus sp. Ndiop]
Length = 254
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 41/224 (18%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERY----AGDQERIQLET 175
+YG +I+++T++++ PL KQV+SS AM+ + P++K IQ++Y A Q+++Q ET
Sbjct: 58 SYGLSIVIVTILIRTLLMPLNVKQVKSSKAMQEIQPELKEIQKKYSSKDANTQQKLQQET 117
Query: 176 ARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAAR 235
L++ G+NPLAGCLP +P+ I +Y A+ DE + + F W
Sbjct: 118 MELFQKNGVNPLAGCLPIFIQMPILIAMYHAIMR-TDE-INSYSFLW------------- 162
Query: 236 QNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSS---QNNDPNMK- 291
F G P Y +LP+L ++ K++ SS ++P M
Sbjct: 163 -----------FELGSPD-------PYFILPILTAAFTFLQQKLMMSSNTTMKSNPQMAI 204
Query: 292 SSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
Q + +P+MIG FAL P+ L+LYW T N+ Q + + K
Sbjct: 205 QMQVMLYVMPIMIGVFALFFPAALALYWVTGNIFMVVQTLLINK 248
>gi|354582053|ref|ZP_09000956.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus lactis
154]
gi|353200670|gb|EHB66130.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus lactis
154]
Length = 292
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 110/216 (50%), Gaps = 36/216 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG +++++ +IV+ PLT KQV SS AM+++ P+V+ I+E+Y + E++Q+ET +L++
Sbjct: 69 YGLSVLVMVLIVRTLILPLTLKQVRSSKAMQAIQPEVQKIREKYKDNPEKMQMETMKLFQ 128
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEG-FFWIPSLAGPTTIAARQNGS 239
+NP+AGCLP L +P++I LY + + GLL E F W+ L P +
Sbjct: 129 ENKVNPMAGCLPLLVQMPIFIALYHS---IYYNGLLREHEFLWM-QLGEPDKL------- 177
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
+LPVL + Y+ K++ N P M Q +
Sbjct: 178 -----------------------FILPVLAAATTYLQTKMMM-KMNPSPQMGMMQFMLFV 213
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++I + P+ L LYWF +NL + Q +L +
Sbjct: 214 YPILIFVMSFQFPAALPLYWFYSNLYTIVQNYFLYR 249
>gi|374998020|ref|YP_004973519.1| preprotein translocase subunit YidC [Desulfosporosinus orientis DSM
765]
gi|357216386|gb|AET71004.1| preprotein translocase subunit YidC [Desulfosporosinus orientis DSM
765]
Length = 224
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 125/240 (52%), Gaps = 28/240 (11%)
Query: 94 LSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSL 153
+S I M +L +L + ST+ + YG AIILLT+++K FPLT KQ+ S L
Sbjct: 1 MSTIVEGMTYLLNILYNLSSTIGLA-NYGVAIILLTILIKTLIFPLTYKQMASMRKTVDL 59
Query: 154 APQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADE 213
P++KAIQE+Y ++E+ LYK +NPL GCLP + +P++ LY AL +
Sbjct: 60 QPKIKAIQEKYKNNKEKANAAVMELYKEHQVNPLGGCLPIVVQLPIFWALYSALRH---- 115
Query: 214 GLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQ 273
F + PS A A G ++ ++ F + +L+LP+ +
Sbjct: 116 ------FPYDPSNAS----AHIFLGFDLTQIYGFTLSY----------HLILPLFAAATT 155
Query: 274 YISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
++ ++ + + DP K+ + +P+ Y + +VP+GL+LYW T N++S QQ+++
Sbjct: 156 FLQTRLTSPNASTDPTQKT---MLYIMPVFFAYISATVPAGLALYWVTMNVVSIFQQLYI 212
>gi|292669288|ref|ZP_06602714.1| stage III sporulation protein J [Selenomonas noxia ATCC 43541]
gi|422344240|ref|ZP_16425166.1| hypothetical protein HMPREF9432_01226 [Selenomonas noxia F0398]
gi|292649129|gb|EFF67101.1| stage III sporulation protein J [Selenomonas noxia ATCC 43541]
gi|355377559|gb|EHG24776.1| hypothetical protein HMPREF9432_01226 [Selenomonas noxia F0398]
Length = 224
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 117/219 (53%), Gaps = 35/219 (15%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YG+ IILLT+++K T+PLT KQV+S AM+ + P++K IQE+Y + + +Q +T L+
Sbjct: 34 SYGYPIILLTILIKLVTYPLTVKQVKSMKAMQEIQPKMKKIQEKYKNNPQMLQQKTGELF 93
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+ AG+NPLAGCLP L +P+ +G+Y AL N FFW+P+++ P +
Sbjct: 94 RNAGVNPLAGCLPLLVQMPILMGMYYALFNFTFPSAAAAAFFWLPNMSEPDPLY------ 147
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
+LPVL ++ ++ K+ + N + +
Sbjct: 148 ------------------------ILPVLSALTTFLQQKMTSTEMNAQ-----MKIMMTV 178
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGG 338
+PL IG+ +L PSGL LYW T N++ QQ W+ + G
Sbjct: 179 MPLFIGWISLKFPSGLVLYWVTMNVVQIIQQWWMYRSEG 217
>gi|212704368|ref|ZP_03312496.1| hypothetical protein DESPIG_02423, partial [Desulfovibrio piger
ATCC 29098]
gi|212672206|gb|EEB32689.1| membrane protein insertase, YidC/Oxa1 family domain protein,
partial [Desulfovibrio piger ATCC 29098]
Length = 423
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 109/212 (51%), Gaps = 32/212 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +II+LT+++KA +PLT K S M+ L P + I+E+Y D+E + E LYK
Sbjct: 230 WGLSIIMLTIVIKAVFWPLTAKSYSSMEKMKKLQPMMANIREKYKDDKEAMNKEVMALYK 289
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF--WIPSLAGPTTIAARQNG 238
G+NP +GC+P L +PV+ GLY+AL + L F ++P G
Sbjct: 290 TYGVNPASGCVPILVQLPVFFGLYQALLTSIE---LRHAPFITYLP-------------G 333
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTN 298
+ + WL P Y + P+++ ++ ++ K+ S DP + Q +
Sbjct: 334 TDLIWLADLSSKDP---------YYITPIIMGITMFLQQKM--SPPATDP---TQQKIMM 379
Query: 299 FLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
FLP++ LS PSGL +YW NN+LS AQQ
Sbjct: 380 FLPIVFTALFLSFPSGLVVYWLVNNILSIAQQ 411
>gi|385811779|ref|YP_005848175.1| preprotein translocase subunit YidC [Ignavibacterium album JCM
16511]
gi|383803827|gb|AFH50907.1| Preprotein translocase subunit YidC [Ignavibacterium album JCM
16511]
Length = 615
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 114/218 (52%), Gaps = 25/218 (11%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YGF II+ ++I+K A +PLTK+ +S M++L P++ ++E+Y D +++ ET +LY
Sbjct: 385 YGFVIIIFSLIIKLAVYPLTKQSYQSMKKMQALQPKIAELKEKYKDDPQKLNSETMKLYS 444
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF-FWIPSLAGPTTIAARQNGS 239
GINP GCLP L +P++I L+ +V + L + F +WI L+ P I
Sbjct: 445 TYGINPAGGCLPILLQMPIFIALWGMFQSVIE--LRQQPFVWWIKDLSTPDVIY------ 496
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
+ + P G L +L+ ++ + K+ DP S + L
Sbjct: 497 DLGFKLPLFGVQQISG---------LALLMGITTFFQQKMTMK----DP---SQKMLVYL 540
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
+P+M+ ++ PSGL+LY+F N+ S AQQ ++ K G
Sbjct: 541 MPIMLTILFMTFPSGLNLYYFMFNVFSIAQQYYINKVG 578
>gi|203287885|ref|YP_002222900.1| 60 kDa inner-membrane protein [Borrelia recurrentis A1]
gi|254772753|sp|B5RRP5.1|YIDC_BORRA RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|201085105|gb|ACH94679.1| 60 kDa inner-membrane protein [Borrelia recurrentis A1]
Length = 545
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 112/215 (52%), Gaps = 20/215 (9%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+ LT++V+ FPLT K ++ + L P++K IQ ++ D +R+ E +LY+
Sbjct: 341 WGLSIMFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQVKFKSDPKRLNEEMGKLYR 400
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G+NP+ GC P L +PV+ LY ++N + G +IP +I G
Sbjct: 401 EEGVNPIGGCFPILLQLPVFFALYGLVNNF----FVLRGASFIPGWIDDLSI-----GDS 451
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF- 299
I + G+ W+D +LP +++++Q +S I SS + ++ S Q F
Sbjct: 452 IYYF-----GYKVFAWTDI---RILPFIMMITQLLST--IVSSNVSFKSLGSQQKFLYFG 501
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
+P+M + +PSGL +YW T N+ + QQ +++
Sbjct: 502 MPIMFFFILYDMPSGLLIYWITTNIFTILQQYYIK 536
>gi|229517141|ref|ZP_04406587.1| OxaI/YidC membrane insertion protein [Vibrio cholerae RC9]
gi|229346204|gb|EEO11176.1| OxaI/YidC membrane insertion protein [Vibrio cholerae RC9]
Length = 541
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 121/261 (46%), Gaps = 49/261 (18%)
Query: 82 DAVTTTKQNSD------WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAA 135
D + T N D WL I + +L V++ + +G AII LT IV+ A
Sbjct: 313 DQMAATAPNLDLVVDYGWLWFIAKPLHWLLSVIQTFVGN------WGVAIICLTFIVRGA 366
Query: 136 TFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLA 195
+PLTK Q S MR L P+++A++ER D++R+ E LYK +NPL GCLP L
Sbjct: 367 MYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILL 426
Query: 196 TIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPL 254
+P++I LY AL + L FF WI L+
Sbjct: 427 QMPIFIALYWALMESVE--LRHSPFFGWIHDLSAQD------------------------ 460
Query: 255 GWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSG 314
Y +LP+ + S ++ ++ + + DP Q + F+P+M +F L PSG
Sbjct: 461 ------PYYILPLQMGASMFV-IQKMSPTTITDP---MQQKIMTFMPVMFTFFFLWFPSG 510
Query: 315 LSLYWFTNNLLSTAQQVWLQK 335
L LYW +N+++ QQ + K
Sbjct: 511 LVLYWLVSNIVTLIQQTLIYK 531
>gi|261363929|ref|ZP_05976812.1| membrane protein insertase, YidC/Oxa1 family [Neisseria mucosa ATCC
25996]
gi|288567942|gb|EFC89502.1| membrane protein insertase, YidC/Oxa1 family [Neisseria mucosa ATCC
25996]
Length = 547
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 103/214 (48%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI++LT+IVKA +PLT S MR+ AP+++AI+E+Y D+ Q +LYK
Sbjct: 356 WGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDRMAQQQAMMQLYK 415
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY AL ++ RQ
Sbjct: 416 DEKINPLGGCLPMLLQIPVFIGLYWALF---------------------ASVELRQ---- 450
Query: 241 ISWLFPFVDGHPPLGW----SDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P LGW S + Y +LPV++ V+ + Q+ N P +
Sbjct: 451 ----------APWLGWITDLSRSDPYYILPVIMAVTMF-----AQTFLNPPPTDPMQAKM 495
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ P+GL LYW NNLL+ AQQ
Sbjct: 496 MKVMPLVFSAMFFFFPAGLVLYWVVNNLLTIAQQ 529
>gi|452852122|ref|YP_007493806.1| Inner membrane protein oxaA [Desulfovibrio piezophilus]
gi|451895776|emb|CCH48655.1| Inner membrane protein oxaA [Desulfovibrio piezophilus]
Length = 555
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 133/289 (46%), Gaps = 51/289 (17%)
Query: 53 PNSADGVKE--LLGVAERLLFTLADAAVSSSDAVTTTKQNSDWLSGITNVMETVLKVLKD 110
PN A K LG R + LA DA+ N W + M L D
Sbjct: 301 PNVAKSFKASYFLGPTNRQM--LAKMPHQLGDAI-----NFGWFDFLAKPMLIGLNFFYD 353
Query: 111 GMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQER 170
+ YG AIILLT+++K +PL++K S M+ L P V ++E+Y D++R
Sbjct: 354 YVGN------YGVAIILLTLVIKLIFWPLSQKSYGSMEQMKKLQPMVAKLREKYGDDKQR 407
Query: 171 IQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPT 230
+ ET LYK +NP+ GCLP + IPV+ GLY+AL +
Sbjct: 408 LNQETMALYKTYKVNPMGGCLPMVVQIPVFFGLYKALLGAVE------------------ 449
Query: 231 TIAARQNGSGISWLFPFVDGHPPLGW-SDTFA---YLVLPVLLVVSQYISVKIIQSSQNN 286
++ I+ L PF D L W +D A Y + P+++ S ++ ++ S+
Sbjct: 450 ----LRHAPFIAHL-PFTD----LPWLADLSAKDPYYISPIIMGASMFLQQRMTPSA--G 498
Query: 287 DPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
DP + Q + +PL+ + L PSGL +YW NNLLS QQ+ + +
Sbjct: 499 DP---TQQKIMLIMPLVFTFMFLQFPSGLVIYWLLNNLLSIGQQLMIAR 544
>gi|374321353|ref|YP_005074482.1| membrane protein oxaA 1 [Paenibacillus terrae HPL-003]
gi|357200362|gb|AET58259.1| membrane protein oxaA 1 precursor [Paenibacillus terrae HPL-003]
Length = 290
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 34/215 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG A+++L +IV+ PLT KQV SS AM+++ PQ+K IQ +Y E++Q ET RL++
Sbjct: 69 YGLAVLILVIIVRTIILPLTLKQVRSSKAMQAIQPQLKEIQAKYKDTPEKVQQETMRLFQ 128
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+AGCLP + +P++I LY A+ + L F W+
Sbjct: 129 ENKVNPMAGCLPLIVQMPIFIALYNAI--YYNSALRDHDFLWL----------------- 169
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
LG D F +LP+L ++ ++ ++ N P Q L
Sbjct: 170 ------------QLGKPDHF--FILPILAAITTFVQTWMMM-KMNPTPQQGPMQFLLYVY 214
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++I + + + PS L LYWF +N+ + Q +L +
Sbjct: 215 PVLILFMSYNFPSALPLYWFYSNIYTIIQNYFLYR 249
>gi|389694017|ref|ZP_10182111.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
[Microvirga sp. WSM3557]
gi|388587403|gb|EIM27696.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
[Microvirga sp. WSM3557]
Length = 619
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 120/223 (53%), Gaps = 17/223 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+L+TVI+K FPL K S M+++ P++ +I+ERYA D+ + Q LY+
Sbjct: 391 FGIAILLVTVILKGLFFPLASKSYRSMAKMKAVQPEMASIRERYADDKMKQQQALMELYR 450
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
INP+AGC P L IPV+ LY+ L V E F WI LA PTTI N
Sbjct: 451 KEKINPVAGCWPVLIQIPVFFALYKVLF-VTIEMRHAPFFGWIRDLAAPDPTTIF---NL 506
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALT 297
G L P+ G P+ F L V P+++ + ++ +K+ N +P + +
Sbjct: 507 FG---LLPYNPGAVPV--IGHFLMLGVWPIIMGFTMWLQMKM-----NPEPPDPVQKQVF 556
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+++P++ + S P+GL +YW NNLLS +QQ ++ K G K
Sbjct: 557 SWMPVIFTFMLGSFPAGLVIYWAWNNLLSVSQQAFIMKRNGVK 599
>gi|88798542|ref|ZP_01114126.1| putative inner membrane protein translocase component YidC
[Reinekea blandensis MED297]
gi|88778642|gb|EAR09833.1| putative inner membrane protein translocase component YidC
[Reinekea sp. MED297]
Length = 559
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++I+L+T+ VK +PLT S MR AP + ++E+Y D++++ E +LY+
Sbjct: 367 WGWSIVLMTLTVKMVLYPLTASSYRSMGKMRKFAPVISELREQYGDDRQKMSQEMMKLYQ 426
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPL GCLP L +PV+I LY L ++ RQ+
Sbjct: 427 KEKLNPLGGCLPMLVQMPVFIALYWVLME---------------------SVELRQS--- 462
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
PF+ L D F VLP+L+ S ++ +++ Q DP Q + F+
Sbjct: 463 -----PFIFWIQDLSLKDPF--FVLPLLMGASMFLQMRM-QQQPTMDP---MQQKIMQFM 511
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P+M + L P+GL+LYWFTNN+++ QQ + K
Sbjct: 512 PVMFTFMFLWFPAGLTLYWFTNNVITIVQQYIVNK 546
>gi|197333980|ref|YP_002154775.1| inner membrane protein translocase component YidC [Vibrio fischeri
MJ11]
gi|423684740|ref|ZP_17659548.1| membrane protein insertase [Vibrio fischeri SR5]
gi|197315470|gb|ACH64917.1| inner membrane protein OxaA [Vibrio fischeri MJ11]
gi|371495787|gb|EHN71381.1| membrane protein insertase [Vibrio fischeri SR5]
Length = 541
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 104/210 (49%), Gaps = 35/210 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII+LT IV+ A +PLTK Q S MR L P++ A++ER D++R+ E LYK
Sbjct: 352 WGLAIIVLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERIGDDRQRMSQEMMELYK 411
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPL GCLP L +P++I LY AL E T F WI L+
Sbjct: 412 KEKVNPLGGCLPILLQMPIFISLYWALMESV-ELRHTPFFGWITDLS------------- 457
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
P Y +LP+L+ S ++ ++ + + DP Q + F+
Sbjct: 458 ---------AQDP--------YYILPLLMGASMFL-IQKMSPTTVTDP---MQQKIMTFM 496
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
P+M F L PSGL LYW +N+++ QQ
Sbjct: 497 PVMFTVFFLWFPSGLVLYWLVSNIVTLIQQ 526
>gi|410629282|ref|ZP_11339986.1| inner membrane protein oxaA [Glaciecola mesophila KMM 241]
gi|410151078|dbj|GAC26755.1| inner membrane protein oxaA [Glaciecola mesophila KMM 241]
Length = 543
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 104/209 (49%), Gaps = 35/209 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+GF+IIL+T++VK A +PLTK Q ES MR+L P++ A++ERY D++++Q +YK
Sbjct: 354 WGFSIILITIVVKGAMYPLTKAQYESMAKMRALKPKMDALKERYGDDKQKMQQAMMEMYK 413
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GC P L +P+++ LY L + E + FWI L
Sbjct: 414 KDKVNPMGGCFPLLLQMPIFLALYWVLLE-SVELRHADFIFWITDL-------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
S Y VLP+L +S Y+ K +Q DP Q + F+
Sbjct: 459 ----------------SVKDPYFVLPILTGLSMYLLQK-LQPMTMTDP---MQQKIMQFM 498
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
P+ + F P+GL LYW +N+++ Q
Sbjct: 499 PVAMSLFFFIFPAGLVLYWLISNIITLIQ 527
>gi|118582022|ref|YP_903272.1| 60 kDa inner membrane insertion protein [Pelobacter propionicus DSM
2379]
gi|166975879|sp|A1AV44.1|YIDC_PELPD RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|118504732|gb|ABL01215.1| protein translocase subunit yidC [Pelobacter propionicus DSM 2379]
Length = 542
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 116/215 (53%), Gaps = 25/215 (11%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG AII++T+I+KA FPLT K +S M+ + P + A++E+Y D+E + LY+
Sbjct: 349 YGVAIIIITIILKALFFPLTHKSYKSMKDMQKIQPMMAALKEKYKDDREGMNKAVMELYR 408
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPL GCLP L IPV+ LY+AL + E +FWI L+GP + + G
Sbjct: 409 DHKVNPLGGCLPMLVQIPVFFALYKALM-FSIELRHAPFYFWITDLSGPDNLFGQMLG-- 465
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
PFV G LP+L+ + +I K+ S+ DP M++ L L
Sbjct: 466 ----LPFVIGP-------------LPLLMGATMFIQQKMTPSTM--DP-MQAKMMLA--L 503
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++ + L+ PSGL LYW NN+L+ QQ+++ K
Sbjct: 504 PVVFTFMFLNFPSGLVLYWLLNNILTIGQQMYINK 538
>gi|59710610|ref|YP_203386.1| inner membrane protein translocase component YidC [Vibrio fischeri
ES114]
gi|59478711|gb|AAW84498.1| cytoplasmic insertase into membrane protein, Sec system [Vibrio
fischeri ES114]
Length = 541
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 104/210 (49%), Gaps = 35/210 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII+LT IV+ A +PLTK Q S MR L P++ A++ER D++R+ E LYK
Sbjct: 352 WGLAIIVLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERIGDDRQRMSQEMMELYK 411
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPL GCLP L +P++I LY AL E T F WI L+
Sbjct: 412 KEKVNPLGGCLPILLQMPIFISLYWALMESV-ELRHTPFFGWITDLS------------- 457
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
P Y +LP+L+ S ++ ++ + + DP Q + F+
Sbjct: 458 ---------AQDP--------YYILPLLMGASMFL-IQKMSPTTVTDP---MQQKIMTFM 496
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
P+M F L PSGL LYW +N+++ QQ
Sbjct: 497 PVMFTVFFLWFPSGLVLYWLVSNIVTLIQQ 526
>gi|295837761|ref|ZP_06824694.1| membrane protein OxaA [Streptomyces sp. SPB74]
gi|197698917|gb|EDY45850.1| membrane protein OxaA [Streptomyces sp. SPB74]
Length = 434
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 125/257 (48%), Gaps = 24/257 (9%)
Query: 91 SDWLSGITNVMETVLKVLKDGMSTLHVP---YAYGFAIILLTVIVKAATFPLTKKQVESS 147
+ W S IT + V+ + P +A+G +I+ L +I++ PL KQ++++
Sbjct: 5 ASWFSFITTPVSWVIVQFHTLYGWIFGPDTGWAWGLSIVSLVIIIRICLIPLFVKQIKAT 64
Query: 148 MAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRAL 207
AM++L P++K IQERY D++R E +LYK +G NPLA CLP L P + LY L
Sbjct: 65 RAMQTLQPEMKRIQERYKSDKQRQSEEMMKLYKESGTNPLASCLPILVQSPFFFALYHVL 124
Query: 208 SNVADE---GLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLV 264
+A G++ + A + + G F G LG T +V
Sbjct: 125 DGIASNKKIGVINDKLL---------DSAQQAHIFGAPLAAKFTSGADSLGADLTTVRIV 175
Query: 265 LPVLLVV---SQYISVKIIQSSQNND-----PNMKSSQALTNFLPLMIGYFALSVPSGLS 316
++V+ SQ+ + + + ++N D P M+ + L P+M F ++ P G+
Sbjct: 176 TACMIVMMSASQFFTQRQLM-TKNVDTSVKTPFMQQQKMLMYVFPIMFAVFGINFPVGVL 234
Query: 317 LYWFTNNLLSTAQQVWL 333
LYW T N+ + QQ+++
Sbjct: 235 LYWLTTNVWTMGQQMYV 251
>gi|303325515|ref|ZP_07355958.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio sp.
3_1_syn3]
gi|302863431|gb|EFL86362.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio sp.
3_1_syn3]
Length = 551
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 110/213 (51%), Gaps = 29/213 (13%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLT+++KA +PLT K S M+ L P + AI+E+Y ++E + E LYK
Sbjct: 355 WGVAIILLTIVIKAVFWPLTAKSYASMEKMKKLQPMMTAIREKYKDNKELMNKEVMALYK 414
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G+NP +GC+P L +PV+ GLY+AL T+I R +
Sbjct: 415 TYGVNPASGCVPILIQLPVFFGLYQALL---------------------TSIELR-HAPF 452
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I +L PF D S Y + PV++ ++ ++ ++ S DP + Q + FL
Sbjct: 453 IMYL-PFTDKLWLADLSAKDPYYITPVIMGLTMFLQQRM--SPPATDP---TQQKIMMFL 506
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
PL+ L PSGL +YW NN+LS QQ WL
Sbjct: 507 PLIFTVLFLGFPSGLVIYWLVNNILSIFQQ-WL 538
>gi|410616023|ref|ZP_11327018.1| inner membrane protein oxaA [Glaciecola polaris LMG 21857]
gi|410164338|dbj|GAC31156.1| inner membrane protein oxaA [Glaciecola polaris LMG 21857]
Length = 543
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 35/209 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+GF+IIL+T++VK A +PLTK Q ES MR+L P++ A++ERY D++++Q +YK
Sbjct: 354 WGFSIILITIVVKGAMYPLTKAQYESMAKMRALKPKMDALKERYGDDKQKMQQAMMEMYK 413
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GC P L +P+++ LY L + E + FWI L
Sbjct: 414 KDKVNPMGGCFPLLLQMPIFLALYWVLLE-SVELRHADFIFWITDL-------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
S Y VLP+L +S ++ K +Q DP Q + F+
Sbjct: 459 ----------------SVKDPYFVLPILTGISMFLLQK-LQPMTMTDP---MQQKIMQFM 498
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
P+ + F P+GL LYW +N+++ Q
Sbjct: 499 PVAMSLFFFIFPAGLVLYWLISNIITLVQ 527
>gi|403389392|ref|ZP_10931449.1| inner membrane protein translocase component YidC [Clostridium sp.
JC122]
Length = 239
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 100/211 (47%), Gaps = 42/211 (19%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
Y+YG AII+ T++VK PLT KQ SS+ + + P+ AIQE+Y D +R Q E +L
Sbjct: 29 YSYGIAIIIFTIVVKVILLPLTIKQTRSSVKLAEVQPKTAAIQEKYKNDPQRAQQEILKL 88
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNG 238
YK ++P++GCLP L P+ I L+ A S + G GF WIP+L P
Sbjct: 89 YKEENVSPMSGCLPLLIQYPIIIVLFYAFSTLNYHG---AGFLWIPNLNQPD-------- 137
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTN 298
Y +LPVL VS YI K++Q N + SSQA+ N
Sbjct: 138 ----------------------PYFILPVLSGVSTYIMSKMLQPKTNAN---SSSQAMPN 172
Query: 299 F------LPLMIGYFALSVPSGLSLYWFTNN 323
+ M + + S + +YW NN
Sbjct: 173 MGMMNIVMAGMFTWMGFKMQSAIVIYWIINN 203
>gi|222823561|ref|YP_002575135.1| inner membrane protein translocase component YidC [Campylobacter
lari RM2100]
gi|222538783|gb|ACM63884.1| 60 kDa inner-membrane protein [Campylobacter lari RM2100]
Length = 526
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 121/243 (49%), Gaps = 41/243 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + I M L L + +G+AI+++T+IV+ FPLT K + S ++
Sbjct: 308 WFTFIAKPMYEFLDFLHGYLGN------WGWAIVIMTLIVRIILFPLTYKSMISMNKLKD 361
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++K I+ERY GD +++ L LYK G NP++GCLP L IP++ +YR L N A
Sbjct: 362 LAPKMKEIRERYKGDPQKMNLHMMELYKKHGANPMSGCLPILIQIPIFFAIYRVLLN-AI 420
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI + +S + P + +LP+ + ++
Sbjct: 421 ELKAAPWAFWI---------------TDLSVMDP---------------WFILPIFMGLT 450
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
+I ++I DP + + FLPL+ +F L+ P+GL+LYW NN+ S QQV
Sbjct: 451 MFIQ-QLITPMAIQDP---MQEKIMKFLPLIFTFFFLTFPAGLTLYWCVNNICSLIQQVI 506
Query: 333 LQK 335
+ K
Sbjct: 507 VNK 509
>gi|410641023|ref|ZP_11351548.1| inner membrane protein oxaA [Glaciecola chathamensis S18K6]
gi|410647420|ref|ZP_11357852.1| inner membrane protein oxaA [Glaciecola agarilytica NO2]
gi|410133010|dbj|GAC06251.1| inner membrane protein oxaA [Glaciecola agarilytica NO2]
gi|410139383|dbj|GAC09735.1| inner membrane protein oxaA [Glaciecola chathamensis S18K6]
Length = 543
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 104/209 (49%), Gaps = 35/209 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+GF+IIL+T++VK A +PLTK Q ES MR+L P++ A++ERY D++++Q +YK
Sbjct: 354 WGFSIILITIVVKGAMYPLTKAQYESMAKMRALKPKMDALKERYGDDKQKMQQAMMEMYK 413
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GC P L +P+++ LY L + E + FWI L
Sbjct: 414 KDKVNPMGGCFPLLLQMPIFLALYWVLLE-SVELRHADFIFWITDL-------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
S Y VLP+L +S Y+ K +Q DP Q + F+
Sbjct: 459 ----------------SVKDPYFVLPILTGLSMYLLQK-LQPMTMTDP---MQQKIMQFM 498
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
P+ + F P+GL LYW +N+++ Q
Sbjct: 499 PVAMSLFFFIFPAGLVLYWLISNIITLIQ 527
>gi|345892377|ref|ZP_08843199.1| hypothetical protein HMPREF1022_01859 [Desulfovibrio sp.
6_1_46AFAA]
gi|345047279|gb|EGW51145.1| hypothetical protein HMPREF1022_01859 [Desulfovibrio sp.
6_1_46AFAA]
Length = 551
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 110/213 (51%), Gaps = 29/213 (13%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLT+++KA +PLT K S M+ L P + AI+E+Y ++E + E LYK
Sbjct: 355 WGVAIILLTIVIKAVFWPLTAKSYASMEKMKKLQPMMTAIREKYKDNKELMNKEVMALYK 414
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G+NP +GC+P L +PV+ GLY+AL T+I R +
Sbjct: 415 TYGVNPASGCVPILIQLPVFFGLYQALL---------------------TSIELR-HAPF 452
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I +L PF D S Y + PV++ ++ ++ ++ S DP + Q + FL
Sbjct: 453 IMYL-PFTDKLWLADLSAKDPYYITPVIMGLTMFLQQRM--SPPATDP---TQQKIMMFL 506
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
PL+ L PSGL +YW NN+LS QQ WL
Sbjct: 507 PLIFTVLFLGFPSGLVIYWLVNNILSIFQQ-WL 538
>gi|332308616|ref|YP_004436467.1| YidC/Oxa1 family membrane protein insertase [Glaciecola sp.
4H-3-7+YE-5]
gi|332175945|gb|AEE25199.1| membrane protein insertase, YidC/Oxa1 family domain containing
[Glaciecola sp. 4H-3-7+YE-5]
Length = 543
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 104/209 (49%), Gaps = 35/209 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+GF+IIL+T++VK A +PLTK Q ES MR+L P++ A++ERY D++++Q +YK
Sbjct: 354 WGFSIILITIVVKGAMYPLTKAQYESMAKMRALKPKMDALKERYGDDKQKMQQAMMEMYK 413
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GC P L +P+++ LY L + E + FWI L
Sbjct: 414 KDKVNPMGGCFPLLLQMPIFLALYWVLLE-SVELRHADFIFWITDL-------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
S Y VLP+L +S Y+ K +Q DP Q + F+
Sbjct: 459 ----------------SVKDPYFVLPILTGLSMYLLQK-LQPMTMTDP---MQQKIMQFM 498
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
P+ + F P+GL LYW +N+++ Q
Sbjct: 499 PVAMSLFFFIFPAGLVLYWLISNIITLIQ 527
>gi|406707245|ref|YP_006757597.1| protein translocase subunit yidC [alpha proteobacterium HIMB59]
gi|406653021|gb|AFS48420.1| protein translocase subunit yidC [alpha proteobacterium HIMB59]
Length = 561
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 14/215 (6%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII+ T++++ FPL + +S M+ L P+++ ++E+Y D+ +Q E LYK
Sbjct: 356 FGWAIIIFTLLMRICFFPLAQASFKSMAKMKKLGPELQRLKEQYGDDRAGMQKEMMALYK 415
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
NP+AGCLP L IPV+ LY+ L V E WI L+ P + G
Sbjct: 416 REKANPIAGCLPILLQIPVFFALYKVLF-VTIEMRHAPFIGWIHDLSAPDPL-------G 467
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+ LF FVD P G F + P+L+ +S ++ K+ N P K + FL
Sbjct: 468 LLTLFGFVDWSVP-GILQLFNIGIWPILMGISMFLQQKL-----NPAPVDKMQAKIFMFL 521
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++ + +GL +YW TNN+LS AQQ +Q+
Sbjct: 522 PIVFTFVLGGFAAGLVIYWTTNNVLSMAQQYVIQR 556
>gi|203284351|ref|YP_002222091.1| 60kDa inner-membrane protein [Borrelia duttonii Ly]
gi|254772750|sp|B5RLZ9.1|YIDC_BORDL RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|201083794|gb|ACH93385.1| 60kDa inner-membrane protein [Borrelia duttonii Ly]
Length = 545
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 113/215 (52%), Gaps = 20/215 (9%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+ LT++V+ FPLT K ++ + L P++K IQ ++ D +R+ E ++LY+
Sbjct: 341 WGLSIMFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQVKFKSDPKRLNEEMSKLYR 400
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G+NP+ GC P L +PV+ LY ++N + G +IP +I G
Sbjct: 401 EEGVNPIGGCFPILLQLPVFFALYGLVNNF----FVLRGASFIPGWIDDLSI-----GDS 451
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF- 299
I + G+ W+D +LP +++++Q +S I SS + ++ + Q F
Sbjct: 452 IYYF-----GYKVFAWTDI---RILPFIMMITQLLST--IVSSNVSFKSLGAQQKFLYFG 501
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
+P+M + +PSGL +YW T N+ + QQ +++
Sbjct: 502 MPIMFFFILYDMPSGLLIYWITTNIFTILQQYYIK 536
>gi|386859672|ref|YP_006272378.1| Inner membrane protein oxaA [Borrelia crocidurae str. Achema]
gi|384934553|gb|AFI31226.1| Inner membrane protein oxaA [Borrelia crocidurae str. Achema]
Length = 545
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 113/215 (52%), Gaps = 20/215 (9%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+ LT++V+ FPLT K ++ + L P++K IQ ++ D +R+ E ++LY+
Sbjct: 341 WGLSIMFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQVKFKSDPKRLNEEMSKLYR 400
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G+NP+ GC P L +PV+ LY ++N + G +IP +I G
Sbjct: 401 EEGVNPIGGCFPILLQLPVFFALYGLVNNF----FVLRGASFIPGWIDDLSI-----GDS 451
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF- 299
I + G+ W+D +LP +++++Q +S I SS + ++ + Q F
Sbjct: 452 IYYF-----GYKVFAWTDI---RILPFIMMITQLLST--IVSSNVSFKSLGAQQKFLYFG 501
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
+P+M + +PSGL +YW T N+ + QQ +++
Sbjct: 502 MPIMFFFILYDMPSGLLIYWITTNIFTILQQYYIK 536
>gi|309804916|ref|ZP_07698978.1| putative stage III sporulation protein J [Lactobacillus iners
LactinV 09V1-c]
gi|309809716|ref|ZP_07703570.1| putative stage III sporulation protein J [Lactobacillus iners SPIN
2503V10-D]
gi|312873301|ref|ZP_07733356.1| putative stage III sporulation protein J [Lactobacillus iners LEAF
2052A-d]
gi|308165855|gb|EFO68076.1| putative stage III sporulation protein J [Lactobacillus iners
LactinV 09V1-c]
gi|308169895|gb|EFO71934.1| putative stage III sporulation protein J [Lactobacillus iners SPIN
2503V10-D]
gi|311091181|gb|EFQ49570.1| putative stage III sporulation protein J [Lactobacillus iners LEAF
2052A-d]
Length = 291
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 152/308 (49%), Gaps = 55/308 (17%)
Query: 52 DPNSADGVKELLGVAERLLFTLA---DAAVSSSDAVTTTKQNSD--WLSGITNVMETVLK 106
D S +K+++ +A LL +L + SS+ +V NS W I + + +
Sbjct: 3 DFLSKKNLKKIIVIATILLISLTITGCVSTSSNGSVPPLSNNSGSFWDRYILYYISSFIL 62
Query: 107 VLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERY-- 164
L + LH AYG++I++ T+IV+ PL ++S +SL P+++A++++Y
Sbjct: 63 WLA---TILH--NAYGWSIVVFTIIVRVVLLPLNAISIKSMAKQQSLQPEMEALRKKYSD 117
Query: 165 --AGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFW 222
A + ++Q ET++LYK +G+NP GCLP L +P+ I L++A+
Sbjct: 118 RDAETRRKLQEETSKLYKESGVNPYLGCLPMLIQMPIMIALWQAILRT------------ 165
Query: 223 IPSLAGPTTIAARQNGSGISWLFPFVD-GHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQ 281
P L QNG F ++D GHP Y+V+P+L + +I+ I Q
Sbjct: 166 -PEL---------QNGR-----FLWMDLGHPD-------PYMVMPILAAIFTFIASYIGQ 203
Query: 282 SSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKD 341
SQ N ++ +T +P+ IG A S+ S LSLYW +NL Q +LQ +
Sbjct: 204 LSQAKSSNNAMTKGMTYVMPVFIGVMACSLQSALSLYWVISNLFQAIQTFFLQ------N 257
Query: 342 PMKQFSDI 349
P+K + ++
Sbjct: 258 PIKYYREL 265
>gi|386345763|ref|YP_006044012.1| membrane protein OxaA [Spirochaeta thermophila DSM 6578]
gi|339410730|gb|AEJ60295.1| Membrane protein oxaA [Spirochaeta thermophila DSM 6578]
Length = 573
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 128/244 (52%), Gaps = 30/244 (12%)
Query: 93 WLSGITNV-METVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMR 151
WL GI ++ +++ + YG AIILLT+ VK FPLT K ES+ M+
Sbjct: 351 WLEGILKFFLQIFFRLIPN----------YGVAIILLTLFVKILLFPLTHKSYESASKMQ 400
Query: 152 SLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVA 211
LAP+++ ++ RY D +R+ E A LY+ G+NPL GCLP L IP++ +Y S+
Sbjct: 401 QLAPKMEEVRNRYKDDPQRMNQELALLYQKEGVNPLGGCLPLLLQIPIFFAMYGLFSSHF 460
Query: 212 DEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVV 271
D T WI L+ P ++ F F P LGW+D +LP++LVV
Sbjct: 461 DLRGATFIPGWIDDLSVPESV------------FHFDTPLPLLGWTDI---RLLPLILVV 505
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
+Q IS KI Q + ++ N Q LP++ + + P+GL +YW N+ + AQQ+
Sbjct: 506 TQIISTKITQGASSSSQN----QLFMYVLPVVFLFILYNAPAGLLVYWVAMNIFTIAQQL 561
Query: 332 WLQK 335
++ +
Sbjct: 562 YINR 565
>gi|224367782|ref|YP_002601945.1| OxaA [Desulfobacterium autotrophicum HRM2]
gi|223690498|gb|ACN13781.1| OxaA [Desulfobacterium autotrophicum HRM2]
Length = 557
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 116/227 (51%), Gaps = 23/227 (10%)
Query: 111 GMSTLH--VPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQ 168
GM+ +H +P YG AI+LLT+++K +PL K S M+ L P + ++E+Y GD+
Sbjct: 349 GMNLIHGLIP-NYGIAIMLLTLLIKLIFWPLGTKSYRSMNDMKKLQPLMMEMREKYKGDK 407
Query: 169 ERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG 228
+R+ E LYK +NP++GCLP + +P++ LYR L A E +WI L+
Sbjct: 408 QRMNQEVMGLYKTYKVNPMSGCLPMIVQMPIFFALYRMLYQ-AIELRHAPFMWWINDLSA 466
Query: 229 PTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDP 288
P + + PF+ P G VL +++ + ++ K+ S DP
Sbjct: 467 PDRLFH------FDFAIPFMQA--PYGIP------VLTIIMGATMFLQQKM--SPSTGDP 510
Query: 289 NMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
L +PL + + ++ P+GL LYW NN+LS QQ ++QK
Sbjct: 511 TQAKMMML---MPLFMTFIFINFPAGLVLYWLVNNVLSIGQQYYIQK 554
>gi|393722480|ref|ZP_10342407.1| membrane protein insertase [Sphingomonas sp. PAMC 26605]
Length = 584
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 119/227 (52%), Gaps = 26/227 (11%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLTV ++ FP+ ++Q S AM+++ P++KAIQE++ D+ R Q E LYK
Sbjct: 375 FGVAIILLTVTIRTLIFPVAQRQFASMAAMKAIQPKMKAIQEKHKDDKARAQQEVMALYK 434
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF-WIPSL--AGPTTIAARQN 237
+NPLAGCLPTL IP+ LY+ L + + + F WI L A P TI
Sbjct: 435 AEKVNPLAGCLPTLIQIPIMYSLYKVLMLTIE--MRHQPFVGWIHDLSAADPATILN--- 489
Query: 238 GSGISWLFPFVDGH-PPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
LF ++ H PP A ++PVLL +S + K+ N P ++ + +
Sbjct: 490 ------LFGYLPYHLPPF-----LAIGIVPVLLGISMFFQFKL-----NPAPMDEAQKQV 533
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ-KFGGAKDP 342
+P ++ + GL +YW T+NL + AQQ L + G K+P
Sbjct: 534 FAIMPWVLMFVMAPFAVGLQVYWITSNLWTVAQQRLLYARHPGLKEP 580
>gi|330835990|ref|YP_004410631.1| membrane protein OxaA [Sphaerochaeta coccoides DSM 17374]
gi|329747893|gb|AEC01249.1| Membrane protein oxaA [Sphaerochaeta coccoides DSM 17374]
Length = 604
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 27/248 (10%)
Query: 91 SDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAM 150
S WL + +++ VL++ + YG AIILLT++ + PL KK + S+ M
Sbjct: 353 SSWLGWLETILKGVLQLFYKVIPN------YGVAIILLTLLTRVLMHPLNKKSMASTARM 406
Query: 151 RSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNV 210
+L+PQ+ ++++YA + +++ TA LY+ INPL GCLP L P+ I LY L+
Sbjct: 407 SALSPQMDELRKKYADNPQKLNEATAALYRKEKINPLGGCLPMLLQFPIMIALYGLLNKH 466
Query: 211 AD--EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVL 268
+ + G WIP L+ P T+ S+ PF+ +LP+L
Sbjct: 467 FELRGAMFIPG--WIPDLSVPDTVLT------FSFNLPFLGNQ----------LHILPIL 508
Query: 269 LVVSQYISVKIIQSSQNNDPNMKSSQALTNF-LPLMIGYFALSVPSGLSLYWFTNNLLST 327
S S+K+ SS + S+ + +PL++ + + PSGL LYW + NL+S
Sbjct: 509 YATSMIFSMKLNPSSSGAAGSQASTMKFMMYGMPLILFFTLYNAPSGLLLYWSSVNLISM 568
Query: 328 AQQVWLQK 335
QQ + K
Sbjct: 569 LQQKFTNK 576
>gi|224534702|ref|ZP_03675274.1| inner membrane protein OxaA [Borrelia spielmanii A14S]
gi|224513950|gb|EEF84272.1| inner membrane protein OxaA [Borrelia spielmanii A14S]
Length = 544
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 119/235 (50%), Gaps = 24/235 (10%)
Query: 101 METVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAI 160
M+ V++V D + +G +II LT++V+ FPLT K ++ + L P++K +
Sbjct: 329 MQIVMQVFYDVIPN------WGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKEL 382
Query: 161 QERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF 220
Q ++ D +++ E RLYK G+NPL GCLP + +P++ LY ++N+ L G
Sbjct: 383 QVKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNL----FLLRGA 438
Query: 221 FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII 280
+IP +I G F + W+D +LP +++ +Q S I
Sbjct: 439 NFIPGWIDDLSIGDSVYHFGYKLYF--------VSWTDI---RILPFIMMFTQLGST--I 485
Query: 281 QSSQNNDPNMKSSQALTNF-LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
SS + N+ + Q F +P+M + ++PSGL +YW T N+ + QQ +++
Sbjct: 486 VSSNIDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIK 540
>gi|309805916|ref|ZP_07699948.1| putative stage III sporulation protein J [Lactobacillus iners
LactinV 03V1-b]
gi|325912298|ref|ZP_08174695.1| putative stage III sporulation protein J [Lactobacillus iners UPII
143-D]
gi|308167692|gb|EFO69839.1| putative stage III sporulation protein J [Lactobacillus iners
LactinV 03V1-b]
gi|325475957|gb|EGC79126.1| putative stage III sporulation protein J [Lactobacillus iners UPII
143-D]
Length = 291
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 152/308 (49%), Gaps = 55/308 (17%)
Query: 52 DPNSADGVKELLGVAERLLFTLA---DAAVSSSDAVTTTKQNSD--WLSGITNVMETVLK 106
D S +K+++ +A LL +L + SS+ +V NS W I + + +
Sbjct: 3 DFLSKKNLKKIIVIATILLISLTITGCVSTSSNGSVPPLSNNSGSFWDRYILYYISSFIL 62
Query: 107 VLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERY-- 164
L + LH AYG++I++ T+IV+ PL ++S +SL P+++A++++Y
Sbjct: 63 WLA---AILH--NAYGWSIVVFTIIVRVVLLPLNAISIKSMAKQQSLQPEMEALRKKYSD 117
Query: 165 --AGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFW 222
A + ++Q ET++LYK +G+NP GCLP L +P+ I L++A+
Sbjct: 118 RDAETRRKLQEETSKLYKESGVNPYLGCLPMLIQMPIMIALWQAILRT------------ 165
Query: 223 IPSLAGPTTIAARQNGSGISWLFPFVD-GHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQ 281
P L QNG F ++D GHP Y+V+P+L + +I+ I Q
Sbjct: 166 -PEL---------QNGR-----FLWMDLGHPD-------PYMVMPILAAIFTFIASYIGQ 203
Query: 282 SSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKD 341
SQ N ++ +T +P+ IG A S+ S LSLYW +NL Q +LQ +
Sbjct: 204 LSQAKSSNNAMTKGMTYVMPVFIGVMACSLQSALSLYWVISNLFQAIQTFFLQ------N 257
Query: 342 PMKQFSDI 349
P+K + ++
Sbjct: 258 PIKYYREL 265
>gi|398827985|ref|ZP_10586187.1| membrane protein insertase, YidC/Oxa1 family containing protein
[Phyllobacterium sp. YR531]
gi|398218703|gb|EJN05205.1| membrane protein insertase, YidC/Oxa1 family containing protein
[Phyllobacterium sp. YR531]
Length = 615
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 120/251 (47%), Gaps = 29/251 (11%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W IT M ++ L + +G AI+++TVI+KA FPL K S M+
Sbjct: 372 WFYFITEPMFYLIDWLYKAIGN------FGVAILVVTVILKALFFPLANKSYASMARMKL 425
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
+ P++ I+E+YA D+ + Q LYK INP+AGC P L IPV+ LY+ L V
Sbjct: 426 VQPKMTEIREKYADDKVKQQQAMMELYKTEKINPIAGCWPILIQIPVFFALYKVLY-VTI 484
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVL---PVLL 269
E F WI LA P + I W P A+L++ P+++
Sbjct: 485 EMRHAPFFGWIQDLAAPDPTSIFNLFGLIPWTVP--------------AFLMIGIWPLIM 530
Query: 270 VVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
V+ ++ +++ N P + Q + N++P++ + S P+GL +YW NN LS Q
Sbjct: 531 GVTMFLQMRM-----NPTPPDPTQQMIFNWMPVIFTFMLASFPAGLVIYWAWNNTLSITQ 585
Query: 330 QVWLQKFGGAK 340
Q + K G K
Sbjct: 586 QAIIMKRQGVK 596
>gi|302190769|ref|ZP_07267023.1| stage III sporulation protein J [Lactobacillus iners AB-1]
gi|309804034|ref|ZP_07698115.1| putative stage III sporulation protein J [Lactobacillus iners
LactinV 11V1-d]
gi|312871192|ref|ZP_07731290.1| putative stage III sporulation protein J [Lactobacillus iners LEAF
3008A-a]
gi|312872789|ref|ZP_07732854.1| putative stage III sporulation protein J [Lactobacillus iners LEAF
2062A-h1]
gi|312874783|ref|ZP_07734802.1| putative stage III sporulation protein J [Lactobacillus iners LEAF
2053A-b]
gi|325913658|ref|ZP_08176020.1| putative stage III sporulation protein J [Lactobacillus iners UPII
60-B]
gi|329919822|ref|ZP_08276773.1| putative stage III sporulation protein J [Lactobacillus iners SPIN
1401G]
gi|349612042|ref|ZP_08891270.1| hypothetical protein HMPREF1027_00697 [Lactobacillus sp. 7_1_47FAA]
gi|308163802|gb|EFO66068.1| putative stage III sporulation protein J [Lactobacillus iners
LactinV 11V1-d]
gi|311089528|gb|EFQ47953.1| putative stage III sporulation protein J [Lactobacillus iners LEAF
2053A-b]
gi|311091831|gb|EFQ50210.1| putative stage III sporulation protein J [Lactobacillus iners LEAF
2062A-h1]
gi|311093206|gb|EFQ51552.1| putative stage III sporulation protein J [Lactobacillus iners LEAF
3008A-a]
gi|325477017|gb|EGC80167.1| putative stage III sporulation protein J [Lactobacillus iners UPII
60-B]
gi|328937169|gb|EGG33597.1| putative stage III sporulation protein J [Lactobacillus iners SPIN
1401G]
gi|348609217|gb|EGY59177.1| hypothetical protein HMPREF1027_00697 [Lactobacillus sp. 7_1_47FAA]
Length = 291
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 152/308 (49%), Gaps = 55/308 (17%)
Query: 52 DPNSADGVKELLGVAERLLFTLA---DAAVSSSDAVTTTKQNSD--WLSGITNVMETVLK 106
D S +K+++ +A LL +L + SS+ +V NS W I + + +
Sbjct: 3 DFLSKKNLKKIIVIATILLISLTITGCVSTSSNGSVPPLSNNSGSFWDRYILYYISSFIL 62
Query: 107 VLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERY-- 164
L + LH AYG++I++ T+IV+ PL ++S +SL P+++A++++Y
Sbjct: 63 WLA---AILH--NAYGWSIVVFTIIVRVVLLPLNAISIKSMAKQQSLQPEMEALRKKYSD 117
Query: 165 --AGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFW 222
A + ++Q ET++LYK +G+NP GCLP L +P+ I L++A+
Sbjct: 118 RDAETRRKLQEETSKLYKESGVNPYLGCLPMLIQMPIMIALWQAILRT------------ 165
Query: 223 IPSLAGPTTIAARQNGSGISWLFPFVD-GHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQ 281
P L QNG F ++D GHP Y+V+P+L + +I+ I Q
Sbjct: 166 -PEL---------QNGR-----FLWMDLGHPD-------PYMVMPILAAIFTFIASYIGQ 203
Query: 282 SSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKD 341
SQ N ++ +T +P+ IG A S+ S LSLYW +NL Q +LQ +
Sbjct: 204 LSQAKSSNNAMTKGMTYVMPVFIGVMACSLQSALSLYWVISNLFQAIQTFFLQ------N 257
Query: 342 PMKQFSDI 349
P+K + ++
Sbjct: 258 PIKYYREL 265
>gi|311032253|ref|ZP_07710343.1| OxaA-like protein precursor [Bacillus sp. m3-13]
Length = 260
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 114/218 (52%), Gaps = 40/218 (18%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGD----QERIQLETA 176
YG +II++T++++ A PL KQ +++ AM++L P++KA++E+Y+ Q+++Q ET
Sbjct: 59 YGLSIIIVTLLIRFAILPLMIKQTKNAKAMQALQPEMKALREKYSSKDQKTQQKLQQETM 118
Query: 177 RLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ 236
L++ G+NPLAGC P L +P+ IG + A++ + + F W
Sbjct: 119 GLFQKHGVNPLAGCFPLLVQMPILIGFFHAITRTTE--IANHNFMW-------------- 162
Query: 237 NGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
F D P Y +LPV+ ++ +I KI+ + +N+P M +
Sbjct: 163 --------FDLGDPDP---------YFILPVVAGITTFIQQKIMMAGMDNNPQMV---MM 202
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
+P+MI FA++ P+ LSLYW N+ Q +++
Sbjct: 203 LWIMPIMIVVFAINFPAALSLYWVVGNIFMIVQTYFIK 240
>gi|421545219|ref|ZP_15991283.1| membrane protein oxaA [Neisseria meningitidis NM140]
gi|421547267|ref|ZP_15993305.1| membrane protein oxaA [Neisseria meningitidis NM183]
gi|421548239|ref|ZP_15994267.1| membrane protein oxaA [Neisseria meningitidis NM2781]
gi|421553472|ref|ZP_15999434.1| membrane protein oxaA [Neisseria meningitidis NM576]
gi|402321296|gb|EJU56771.1| membrane protein oxaA [Neisseria meningitidis NM140]
gi|402321630|gb|EJU57103.1| membrane protein oxaA [Neisseria meningitidis NM183]
gi|402326961|gb|EJU62359.1| membrane protein oxaA [Neisseria meningitidis NM2781]
gi|402328149|gb|EJU63529.1| membrane protein oxaA [Neisseria meningitidis NM576]
Length = 545
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 102/214 (47%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII+LT+IVKA +PLT S MR+ AP+++AI+E+Y D+ Q +LYK
Sbjct: 354 WGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDRMAQQQAMMQLYK 413
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY AL ++ RQ
Sbjct: 414 DEKINPLGGCLPMLLQIPVFIGLYWALF---------------------ASVELRQA--- 449
Query: 241 ISWLFPFVDGHPPLGW----SDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P LGW S + Y +LP+++ + + Q+ N P +
Sbjct: 450 -----------PWLGWITDLSRSDPYYILPIIMAATMF-----AQTYLNPPPTDPMQAKM 493
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ P+GL LYW NNLL+ AQQ
Sbjct: 494 MKIMPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 527
>gi|37678187|ref|NP_932796.1| inner membrane protein translocase component YidC [Vibrio
vulnificus YJ016]
gi|61214266|sp|Q7MQK5.1|YIDC_VIBVY RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|37196926|dbj|BAC92767.1| inner membrane protein, 60 kDa [Vibrio vulnificus YJ016]
Length = 539
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 116/243 (47%), Gaps = 41/243 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
WL I + +L V++ + +G AII LT IV+ A +PLTK Q S MR
Sbjct: 328 WLWFIAKPLHWLLSVIQSFVGN------WGVAIICLTFIVRGAMYPLTKAQYTSMAKMRM 381
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+++A++ER D++R+ E LYK +NPL GCLP + +P++I LY AL +
Sbjct: 382 LQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVE 441
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
++ I W+ P Y +LP+L+ S
Sbjct: 442 ----------------------LRHSPFILWIHDLSAQDP---------YFILPLLMGGS 470
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ ++ + + DP Q + F+P+M +F L PSGL LYW +N+++ QQ
Sbjct: 471 MFL-IQKMSPTTVTDP---MQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQSL 526
Query: 333 LQK 335
+ K
Sbjct: 527 IYK 529
>gi|414175555|ref|ZP_11429959.1| inner membrane protein oxaA [Afipia broomeae ATCC 49717]
gi|410889384|gb|EKS37187.1| inner membrane protein oxaA [Afipia broomeae ATCC 49717]
Length = 610
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 120/228 (52%), Gaps = 15/228 (6%)
Query: 115 LHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLE 174
H+ +G AI+ +TV+VK FPL K S M+++ PQ+ A++++Y D+ + Q E
Sbjct: 378 FHIFGNFGVAILAVTVLVKLIFFPLANKSYASMAKMKAVQPQLAALKDKYPDDKMKQQQE 437
Query: 175 TARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAA 234
+YK INP+AGCLP L IPV+ LY+ L V E F WI L+ P
Sbjct: 438 MMEIYKKEKINPIAGCLPILIQIPVFFSLYKVLF-VTIEMRHAPFFGWIKDLSAPDP--- 493
Query: 235 RQNGSGISWLFPFVDGH-PPLGWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKS 292
N + LF F P LG+ + +L + P+++ ++ + +K+ N P +
Sbjct: 494 -TNLFNLFGLFAFDPTQLPVLGY---YLHLGIWPIIMGITMWFQMKL-----NPTPPDPT 544
Query: 293 SQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+ + +++PL+ + P+GL +YW NNLLS QQ ++ K GAK
Sbjct: 545 QKMIFDWMPLIFTFMLAGFPAGLVIYWAWNNLLSVLQQSYIMKKNGAK 592
>gi|27364440|ref|NP_759968.1| insertase [Vibrio vulnificus CMCP6]
gi|38503001|sp|Q8DDI2.1|YIDC_VIBVU RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|27360559|gb|AAO09495.1| OxaI/YidC membrane insertion protein [Vibrio vulnificus CMCP6]
Length = 539
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 116/243 (47%), Gaps = 41/243 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
WL I + +L V++ + +G AII LT IV+ A +PLTK Q S MR
Sbjct: 328 WLWFIAKPLHWLLSVIQSFVGN------WGVAIICLTFIVRGAMYPLTKAQYTSMAKMRM 381
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+++A++ER D++R+ E LYK +NPL GCLP + +P++I LY AL +
Sbjct: 382 LQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVE 441
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
++ I W+ P Y +LP+L+ S
Sbjct: 442 ----------------------LRHSPFILWIHDLSAQDP---------YFILPLLMGGS 470
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ ++ + + DP Q + F+P+M +F L PSGL LYW +N+++ QQ
Sbjct: 471 MFL-IQKMSPTTVTDP---MQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQSL 526
Query: 333 LQK 335
+ K
Sbjct: 527 IYK 529
>gi|259500780|ref|ZP_05743682.1| SpoIIIJ family protein [Lactobacillus iners DSM 13335]
gi|315654127|ref|ZP_07907043.1| SpoIIIJ family protein [Lactobacillus iners ATCC 55195]
gi|259167474|gb|EEW51969.1| SpoIIIJ family protein [Lactobacillus iners DSM 13335]
gi|315488823|gb|EFU78469.1| SpoIIIJ family protein [Lactobacillus iners ATCC 55195]
Length = 296
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 152/308 (49%), Gaps = 55/308 (17%)
Query: 52 DPNSADGVKELLGVAERLLFTLA---DAAVSSSDAVTTTKQNSD--WLSGITNVMETVLK 106
D S +K+++ +A LL +L + SS+ +V NS W I + + +
Sbjct: 8 DFLSKKNLKKIIVIATILLISLTITGCVSTSSNGSVPPLSNNSGSFWDRYILYYISSFIL 67
Query: 107 VLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERY-- 164
L + LH AYG++I++ T+IV+ PL ++S +SL P+++A++++Y
Sbjct: 68 WLA---AILH--NAYGWSIVVFTIIVRVVLLPLNAISIKSMAKQQSLQPEMEALRKKYSD 122
Query: 165 --AGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFW 222
A + ++Q ET++LYK +G+NP GCLP L +P+ I L++A+
Sbjct: 123 RDAETRRKLQEETSKLYKESGVNPYLGCLPMLIQMPIMIALWQAILRT------------ 170
Query: 223 IPSLAGPTTIAARQNGSGISWLFPFVD-GHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQ 281
P L QNG F ++D GHP Y+V+P+L + +I+ I Q
Sbjct: 171 -PEL---------QNGR-----FLWMDLGHPD-------PYMVMPILAAIFTFIASYIGQ 208
Query: 282 SSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKD 341
SQ N ++ +T +P+ IG A S+ S LSLYW +NL Q +LQ +
Sbjct: 209 LSQAKSSNNAMTKGMTYVMPVFIGVMACSLQSALSLYWVISNLFQAIQTFFLQ------N 262
Query: 342 PMKQFSDI 349
P+K + ++
Sbjct: 263 PIKYYREL 270
>gi|398832296|ref|ZP_10590457.1| membrane protein insertase, YidC/Oxa1 family containing protein
[Herbaspirillum sp. YR522]
gi|398223393|gb|EJN09737.1| membrane protein insertase, YidC/Oxa1 family containing protein
[Herbaspirillum sp. YR522]
Length = 565
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 110/211 (52%), Gaps = 27/211 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+ IILLTV++K FPL+ S M++++P+++AI+ER+ GD + + E +YK
Sbjct: 368 WGWTIILLTVLIKLVFFPLSAASYRSMAKMKAVSPRMQAIRERHKGDPQAMNREMMAMYK 427
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRA-LSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
INPL GCLP + IPV+I LY L++V G G WI L P T+
Sbjct: 428 TEKINPLGGCLPIVIQIPVFISLYWVLLASVEMRGAPWLG--WIHDLTAPDTLFGT---- 481
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
P+ + P+G +LP+++ S ++ K+ N P + F
Sbjct: 482 -----IPYFNM--PVG--------LLPIIMAASMFLQTKL-----NPTPPDPVQAKVMMF 521
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ + PSGL LYW TNN+LS AQQ
Sbjct: 522 MPLVFSFMFFFFPSGLVLYWVTNNVLSIAQQ 552
>gi|410458113|ref|ZP_11311876.1| OxaA-like protein precursor [Bacillus azotoformans LMG 9581]
gi|409931741|gb|EKN68717.1| OxaA-like protein precursor [Bacillus azotoformans LMG 9581]
Length = 255
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 112/218 (51%), Gaps = 40/218 (18%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGD----QERIQLETA 176
YG +II++T+I++ A PL KQ ++S AM+++ P++K +Q++YA Q+++Q ET
Sbjct: 59 YGLSIIVVTIIIRLAILPLMIKQTQNSKAMQAIQPELKELQQKYASKDPKTQQKLQQETM 118
Query: 177 RLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ 236
L++ G+NPLAGC P + +P+ IG Y A+ A+ + F W
Sbjct: 119 ALFQRHGVNPLAGCFPLVIQMPILIGFYHAIMRTAE--IANHSFLW-------------- 162
Query: 237 NGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
F D P + +LP++ ++ ++ K++ N+P MK +
Sbjct: 163 --------FDLGDKDP---------FYILPLIAGLTTFLQQKMMMHGMENNPQMK---MM 202
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
+P+MI FA+S P+ LSLYW N+ Q +++
Sbjct: 203 LYIMPVMIVVFAVSFPAALSLYWVVGNIFMIVQTYFIK 240
>gi|323137577|ref|ZP_08072654.1| membrane protein insertase, YidC/Oxa1 family [Methylocystis sp.
ATCC 49242]
gi|322397203|gb|EFX99727.1| membrane protein insertase, YidC/Oxa1 family [Methylocystis sp.
ATCC 49242]
Length = 591
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 114/220 (51%), Gaps = 11/220 (5%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+ +TVIVKAA PL K +S M+ + P++K ++E+Y D+ + +E LYK
Sbjct: 369 FGLAILAVTVIVKAAFLPLANKSYKSIAKMKEIQPKIKELKEKYGDDKHKFNMEQMELYK 428
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP +GCLP L IPV+ LY+ L V E F WI L+ P N
Sbjct: 429 REKVNPASGCLPVLLQIPVFFSLYKVLV-VTIEMRHAPFFGWIKDLSAPDP----TNVFN 483
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+ L P+ H + + A V P+++ V+ ++ +K+ N +P + + + ++
Sbjct: 484 LFGLIPWDPTHVAI-FGPYLALGVWPLVMGVTMWLQMKM-----NPEPTDEIQKTMFAWM 537
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
P+M + S SGL +YW NNLLS QQ + K G K
Sbjct: 538 PVMFTFTMGSFASGLIIYWSWNNLLSIVQQGVIMKRAGVK 577
>gi|427412759|ref|ZP_18902951.1| YidC/Oxa1 family membrane protein insertase [Veillonella ratti
ACS-216-V-Col6b]
gi|425715575|gb|EKU78561.1| YidC/Oxa1 family membrane protein insertase [Veillonella ratti
ACS-216-V-Col6b]
Length = 215
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 122/239 (51%), Gaps = 36/239 (15%)
Query: 97 ITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQ 156
+ + M T+L + L P +YG AII++T+ +KA PLT KQV+S M+ L P+
Sbjct: 7 LVDFMRTLLTYCYNFTEALGFP-SYGIAIIIMTIGIKAILAPLTAKQVKSMKGMQKLQPK 65
Query: 157 VKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLL 216
+K IQ +Y D +R Q E A++YK G+NPL+GCLP L +P I ++ AL +
Sbjct: 66 MKEIQNKYKNDPQRAQQEIAKMYKELGVNPLSGCLPLLVQMPFLIAIFYALQGYPYDPA- 124
Query: 217 TEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYIS 276
E F W+PSL G +D +LPVL +S ++
Sbjct: 125 HESFLWLPSL----------------------------GEADHLY--ILPVLSALSTFVM 154
Query: 277 VKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
K Q++Q+ + + F+PL IGY +L+ PSGL +YW +N+ QQ ++ +
Sbjct: 155 SK--QTAQDTPGG--QQKVMQIFMPLFIGYISLNFPSGLVIYWVVSNVFQMIQQFFIYR 209
>gi|404380197|ref|ZP_10985235.1| membrane protein insertase, YidC/Oxa1 family domain [Simonsiella
muelleri ATCC 29453]
gi|294482395|gb|EFG30089.1| membrane protein insertase, YidC/Oxa1 family domain [Simonsiella
muelleri ATCC 29453]
Length = 555
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 114/219 (52%), Gaps = 44/219 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII LT+IVKA FPL +K +S MR++AP+++A++++YA DQ +Q +LYK
Sbjct: 350 WGWAIIFLTLIVKAVLFPLNQKAYKSMAKMRTVAPKMEALKKQYANDQMGMQQAMIKLYK 409
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L +P++IGLY W+ L ++ RQ
Sbjct: 410 DEQINPLGGCLPMLIQMPIFIGLY-----------------WMIFL----SVELRQA--- 445
Query: 241 ISWLFPFVDGHPPLGWSDTFA----YLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P LGW + + +LP+L+ + + K+ S +DP M++ +
Sbjct: 446 -----------PWLGWITDLSRADPFYILPILMAATMWFQTKL--SPPPSDP-MQAQ--M 489
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+PLM P+GL LY+ NNLL+ AQQ ++ +
Sbjct: 490 MKIMPLMFSIMFFFFPAGLVLYYVVNNLLTIAQQWYINR 528
>gi|338741686|ref|YP_004678648.1| transmembrane protein, OxaA-like, preprotein translocase component
[Hyphomicrobium sp. MC1]
gi|337762249|emb|CCB68084.1| transmembrane protein, OxaA-like, preprotein translocase component
[Hyphomicrobium sp. MC1]
Length = 630
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 129/250 (51%), Gaps = 27/250 (10%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W IT + ++++++ V + +G I++LTVIVKAA +PL KQ ES M+
Sbjct: 376 WFYFITRPLFSLMEMING------VVHNFGITILVLTVIVKAAFYPLASKQYESMARMKK 429
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
+ P+++ I+E+Y D +R Q E LY+ INPLAGC P L IPV+ LY+ L D
Sbjct: 430 MQPEMQRIKEQYKDDPQRQQKEIFDLYRTQKINPLAGCWPILLQIPVFFALYKVLFVTID 489
Query: 213 EGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYL-VLPVLLV 270
+ FF WI L+ P + + + LF + P TF ++ P+++
Sbjct: 490 --MRHAPFFGWIHDLSAP-------DPTTVFNLFGLLPYDVP-----TFLHIGAWPLVMG 535
Query: 271 VSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
++ ++ +++ N Q + F+P+M + S P+GL +YW +N LS QQ
Sbjct: 536 ITMWVQMQL-----NPPQPDPIQQQIFQFMPVMFTFLLASFPAGLVIYWAWSNTLSICQQ 590
Query: 331 VWLQKFGGAK 340
+ + K GA+
Sbjct: 591 LLINKRSGAE 600
>gi|109900610|ref|YP_663865.1| 60 kDa inner membrane insertion protein [Pseudoalteromonas
atlantica T6c]
gi|123360110|sp|Q15MS7.1|YIDC_PSEA6 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|109702891|gb|ABG42811.1| protein translocase subunit yidC [Pseudoalteromonas atlantica T6c]
Length = 543
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 104/210 (49%), Gaps = 37/210 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+GF+IIL+T++VK A +PLTK Q ES MR+L P++ A++ERY D++++Q +YK
Sbjct: 354 WGFSIILITIVVKGAMYPLTKAQYESMAKMRALKPKMDALKERYGDDKQKMQQAMMEMYK 413
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF-FWIPSLAGPTTIAARQNGS 239
+NP+ GC P L +P+++ LY L + L F FWI L
Sbjct: 414 KDKVNPMGGCFPLLLQMPIFLALYWVLLESVE--LRHANFIFWITDL------------- 458
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
S Y VLP+L +S Y+ K +Q DP Q + F
Sbjct: 459 -----------------SVKDPYFVLPILTGLSMYLLQK-LQPMTMTDP---MQQKIMQF 497
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
+P+ + F P+GL LYW +N+++ Q
Sbjct: 498 MPVAMSLFFFIFPAGLVLYWLISNIITLIQ 527
>gi|89074709|ref|ZP_01161167.1| putative inner membrane protein translocase component YidC
[Photobacterium sp. SKA34]
gi|89049473|gb|EAR55034.1| putative inner membrane protein translocase component YidC
[Photobacterium sp. SKA34]
Length = 544
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 129/279 (46%), Gaps = 48/279 (17%)
Query: 53 PNSADGVKELLGVAERLLFTLADAAVSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGM 112
P + +K L V +L +A A + + V + WL I N + +L + +
Sbjct: 294 PGQSKAIKATLWVGPKLQNEMAATAKNLNLTV-----DYGWLWFIANPLHKLLSFIHGLV 348
Query: 113 STLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQ 172
+G AII+LT IV+ A +PLTK Q S MR L P+++A++ER D++R
Sbjct: 349 GN------WGIAIIILTFIVRGAMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDRQRQS 402
Query: 173 LETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTT 231
E LYK +NPL GCLP L +P++I LY AL + L FF WI L+
Sbjct: 403 QEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVE--LRHAPFFGWIHDLSAQD- 459
Query: 232 IAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMK 291
Y VLP+L+ ++ + ++ + S DP
Sbjct: 460 -----------------------------PYYVLPILMGITMFF-IQKMSPSTVTDP--- 486
Query: 292 SSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
Q + F+P+M +F L PSGL LYW +N+++ QQ
Sbjct: 487 MQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQ 525
>gi|261400585|ref|ZP_05986710.1| membrane protein insertase, YidC/Oxa1 family [Neisseria lactamica
ATCC 23970]
gi|269209662|gb|EEZ76117.1| membrane protein insertase, YidC/Oxa1 family [Neisseria lactamica
ATCC 23970]
Length = 548
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 102/214 (47%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII+LT+IVKA +PLT S MR+ AP+++AI+E+Y D+ Q +LYK
Sbjct: 357 WGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDRMAQQQAMMQLYK 416
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY AL ++ RQ
Sbjct: 417 DEKINPLGGCLPMLLQIPVFIGLYWALF---------------------ASVELRQA--- 452
Query: 241 ISWLFPFVDGHPPLGW----SDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P LGW S + Y +LP+++ + + Q+ N P +
Sbjct: 453 -----------PWLGWITDLSRSDPYYILPIIMAATMF-----AQTYLNPPPTDPMQAKM 496
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ P+GL LYW NNLL+ AQQ
Sbjct: 497 MKIMPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 530
>gi|313669125|ref|YP_004049409.1| integral membrane protein [Neisseria lactamica 020-06]
gi|313006587|emb|CBN88052.1| putative integral membrane protein [Neisseria lactamica 020-06]
Length = 545
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 102/214 (47%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII+LT+IVKA +PLT S MR+ AP+++AI+E+Y D+ Q +LYK
Sbjct: 354 WGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDRMAQQQAMMQLYK 413
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY AL ++ RQ
Sbjct: 414 DEKINPLGGCLPMLLQIPVFIGLYWALF---------------------ASVELRQ---- 448
Query: 241 ISWLFPFVDGHPPLGW----SDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P LGW S + Y +LP+++ + + Q+ N P +
Sbjct: 449 ----------APWLGWITDLSRSDPYYILPIIMAATMF-----AQTYLNPPPTDPMQAKM 493
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ P+GL LYW NNLL+ AQQ
Sbjct: 494 MKIMPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 527
>gi|312879852|ref|ZP_07739652.1| membrane protein insertase, YidC/Oxa1 family [Aminomonas
paucivorans DSM 12260]
gi|310783143|gb|EFQ23541.1| membrane protein insertase, YidC/Oxa1 family [Aminomonas
paucivorans DSM 12260]
Length = 253
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 117/215 (54%), Gaps = 8/215 (3%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
++YG AIILLT+ V+ PL+ KQ+ S M+ + P++K IQE+YAGD+E++ E +L
Sbjct: 13 HSYGLAIILLTLAVRVLLHPLSHKQLMSMQRMQKIQPRLKVIQEKYAGDKEKLNQEMMKL 72
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRAL--SNVADEGLLTEGFFWIPSLAGPTTIAARQ 236
YK G+NP AGC+P L +P++I LYR L + A L G A +
Sbjct: 73 YKENGVNPAAGCMPLLVQLPIFILLYRVLMQYDFAKATFLGVGLDTSALGALAAAVGMPV 132
Query: 237 NGSGISWLFPFVDGHPP-LGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
+ + + HP L D + +V +L+V+ +++ + S N+P M
Sbjct: 133 KNASFGSVLQGLAAHPEGLMRLDLYGPVV--ILIVLVGFLTWFQQRLSSANNPQMA---F 187
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
L F+PL + + LS+P G+ LYW +++ +S AQQ
Sbjct: 188 LNWFMPLFMSFICLSLPGGVMLYWGSSSFISVAQQ 222
>gi|309807784|ref|ZP_07701716.1| putative stage III sporulation protein J [Lactobacillus iners
LactinV 01V1-a]
gi|308168886|gb|EFO70972.1| putative stage III sporulation protein J [Lactobacillus iners
LactinV 01V1-a]
Length = 294
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 152/308 (49%), Gaps = 55/308 (17%)
Query: 52 DPNSADGVKELLGVAERLLFTLA---DAAVSSSDAVTTTKQNSD--WLSGITNVMETVLK 106
D S +K+++ +A LL +L + SS+ +V NS W I + + +
Sbjct: 3 DFLSKKNLKKIIVIATILLISLTITGCVSTSSNGSVPPLSNNSGSFWDRYILYYISSFIL 62
Query: 107 VLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERY-- 164
L + LH AYG++I++ T+IV+ PL ++S +SL P+++A++++Y
Sbjct: 63 WLA---AILH--NAYGWSIVVFTIIVRVVLLPLNAISIKSMAKQQSLQPEMEALRKKYSD 117
Query: 165 --AGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFW 222
A + ++Q ET++LYK +G+NP GCLP L +P+ I L++A+
Sbjct: 118 RDAETRRKLQEETSKLYKESGVNPYLGCLPMLIQMPIMIALWQAILRT------------ 165
Query: 223 IPSLAGPTTIAARQNGSGISWLFPFVD-GHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQ 281
P L QNG F ++D GHP Y+V+P+L + +I+ I Q
Sbjct: 166 -PEL---------QNGR-----FLWMDLGHPD-------PYMVMPILAAIFTFIASYIGQ 203
Query: 282 SSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKD 341
SQ N ++ +T +P+ IG A S+ S LSLYW +NL Q +LQ +
Sbjct: 204 LSQAKSSNNAMTKGMTYVMPVFIGVMACSLQSALSLYWVISNLFQAIQTFFLQ------N 257
Query: 342 PMKQFSDI 349
P+K + ++
Sbjct: 258 PIKYYREL 265
>gi|385800983|ref|YP_005837387.1| YidC/Oxa1 family membrane protein insertase [Halanaerobium
praevalens DSM 2228]
gi|309390347|gb|ADO78227.1| membrane protein insertase, YidC/Oxa1 family [Halanaerobium
praevalens DSM 2228]
Length = 216
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 122/245 (49%), Gaps = 42/245 (17%)
Query: 92 DWL-SGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAM 150
DWL +G+ ++ + ++ + YG AII+ T+++K A +PLT KQ S M
Sbjct: 3 DWLINGMAYALDFIYNIVGN----------YGSAIIIFTLLIKIALYPLTAKQTRSMREM 52
Query: 151 RSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNV 210
+ + P++K IQ +Y D+E+ Q E +LY+ G+NP AGCLP + + + I LYR + +
Sbjct: 53 QEIQPEMKKIQNKYEDDKEKQQEEMMKLYQEHGVNPAAGCLPMIVQMAILIPLYRTIFAL 112
Query: 211 ADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLV 270
D+ + +E F WI ++ NGS L D A ++L +++
Sbjct: 113 GDK-MASEAFLWIGTIT---------NGS--------------LAEPDI-AIVLLNAVIM 147
Query: 271 VSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+ Q +Q S + +PL I + +PSG+ LYWFT+ L + AQQ
Sbjct: 148 LGQ------THMTQKLSGGEGKSNKMMYMMPLFIIFIGFRLPSGVLLYWFTSTLFTVAQQ 201
Query: 331 VWLQK 335
+L K
Sbjct: 202 YFLSK 206
>gi|320157824|ref|YP_004190203.1| inner membrane protein translocase component YidC, long form
[Vibrio vulnificus MO6-24/O]
gi|319933136|gb|ADV88000.1| inner membrane protein translocase component YidC, long form
[Vibrio vulnificus MO6-24/O]
Length = 539
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 116/243 (47%), Gaps = 41/243 (16%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
WL I + +L V++ + +G AII LT IV+ A +PLTK Q S MR
Sbjct: 328 WLWFIAKPLHWLLSVIQSVVGN------WGVAIICLTFIVRGAMYPLTKAQYTSMAKMRM 381
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+++A++ER D++R+ E LYK +NPL GCLP + +P++I LY AL +
Sbjct: 382 LQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVE 441
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
++ I W+ P Y +LP+L+ S
Sbjct: 442 ----------------------LRHSPFILWIHDLSAQDP---------YFILPLLMGGS 470
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ ++ + + DP Q + F+P+M +F L PSGL LYW +N+++ QQ
Sbjct: 471 MFL-IQKMSPTTVTDP---MQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQSL 526
Query: 333 LQK 335
+ K
Sbjct: 527 IYK 529
>gi|357400706|ref|YP_004912631.1| membrane protein OxaA [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|386356762|ref|YP_006055008.1| inner membrane protein translocase component YidC [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|337767115|emb|CCB75826.1| Membrane protein oxaA [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365807270|gb|AEW95486.1| putative inner membrane protein translocase component YidC
[Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 390
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 158/325 (48%), Gaps = 43/325 (13%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L ++++ PL KQ++++ M+ L P++KAIQERY D++R E +L
Sbjct: 33 WAWGLSIVSLVIVIRICLIPLFVKQIKATRNMQVLQPKMKAIQERYKHDKQRQSEEMMKL 92
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD-------EGLLTEGFFWIPSLAGPTT 231
YK +G NPL+ CLP L P ++ LY L N+A L + P +
Sbjct: 93 YKESGTNPLSSCLPILVQSPFFMSLYGVLHNIATGHEVGVIHSQLLDSARHAHIFGAPLS 152
Query: 232 IAARQNGSGISWLFPFVDGHPPLGWSDT---FAYLVLPVLLVVSQYISVKIIQSSQNND- 287
+ + + I+ LG S T +V+ VL+ SQ+ + + + ++N D
Sbjct: 153 VTFTDSANKIA----------SLGASATDVRIVTVVMIVLMSASQFYTQRQLM-TKNVDM 201
Query: 288 ----PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPM 343
P M+ + L P+M F ++ P G+ +YW T N+ + QQ+++ + ++P
Sbjct: 202 TVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTMGQQMFVIR----RNPT 257
Query: 344 KQFSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRRQQRE 403
I ER + ++ L+ ++ A+ A T E +P +R Q+ +R +
Sbjct: 258 P--GSIAFKERQERLRAKGKLA--EEPAKGAAAKTAESGQP------VRRQQPKR---QS 304
Query: 404 EEKRKAAEAAAKGNQTINGEQEREA 428
+ +R+ A AKG + ++ER A
Sbjct: 305 KSQRQTGPATAKGGKVTGTDEERPA 329
>gi|242278540|ref|YP_002990669.1| hypothetical protein Desal_1066 [Desulfovibrio salexigens DSM 2638]
gi|259515640|sp|C6C0J6.1|YIDC_DESAD RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|242121434|gb|ACS79130.1| 60 kDa inner membrane insertion protein [Desulfovibrio salexigens
DSM 2638]
Length = 539
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 29/214 (13%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG AIILLT+++K +PL+ K +S M+ L P + ++E++ D+E + E +LYK
Sbjct: 349 YGIAIILLTIVIKILFWPLSHKSYKSMEQMKRLQPMMAKLREKHGDDREALNKEMMQLYK 408
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP L IPV+ GLY+AL T+A R +
Sbjct: 409 TYNVNPAGGCLPMLLQIPVFFGLYKALMG---------------------TVALRH--AD 445
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
PF D S + P+++ + ++ K+ S+ DP + Q + FL
Sbjct: 446 FVHFLPFTDIVWLADLSAKDPLYITPIVMGATMFLQQKMTPSA--GDP---TQQKIMMFL 500
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
PL+ + L+ PSGL +YW NN+LS AQQ W+
Sbjct: 501 PLVFTFMFLNFPSGLVVYWMVNNVLSIAQQ-WMM 533
>gi|416164668|ref|ZP_11607257.1| inner membrane protein OxaA [Neisseria meningitidis N1568]
gi|433474225|ref|ZP_20431579.1| membrane protein insertase, YidC/Oxa1 family protein [Neisseria
meningitidis 97021]
gi|433484655|ref|ZP_20441874.1| membrane protein insertase, YidC/Oxa1 family protein [Neisseria
meningitidis 2002038]
gi|433486899|ref|ZP_20444088.1| membrane protein insertase, YidC/Oxa1 family protein [Neisseria
meningitidis 97014]
gi|325127482|gb|EGC50411.1| inner membrane protein OxaA [Neisseria meningitidis N1568]
gi|432207543|gb|ELK63532.1| membrane protein insertase, YidC/Oxa1 family protein [Neisseria
meningitidis 97021]
gi|432219741|gb|ELK75577.1| membrane protein insertase, YidC/Oxa1 family protein [Neisseria
meningitidis 2002038]
gi|432220498|gb|ELK76318.1| membrane protein insertase, YidC/Oxa1 family protein [Neisseria
meningitidis 97014]
Length = 545
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 102/214 (47%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI++LT+IVKA +PLT S MR+ AP+++AI+E+Y D+ Q +LYK
Sbjct: 354 WGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDRMAQQQAMMQLYK 413
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY AL ++ RQ
Sbjct: 414 DEKINPLGGCLPMLLQIPVFIGLYWALF---------------------ASVELRQA--- 449
Query: 241 ISWLFPFVDGHPPLGW----SDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P LGW S + Y +LP+++ + + Q+ N P +
Sbjct: 450 -----------PWLGWITDLSRSDPYYILPIIMAATMF-----AQTYLNPPPTDPMQAKM 493
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ P+GL LYW NNLL+ AQQ
Sbjct: 494 MKIMPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 527
>gi|427429274|ref|ZP_18919309.1| Inner membrane protein translocase component YidC, long form
[Caenispirillum salinarum AK4]
gi|425880467|gb|EKV29163.1| Inner membrane protein translocase component YidC, long form
[Caenispirillum salinarum AK4]
Length = 585
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI++ TV +K A FPL K ++ M+ L P++K +QER+ D+ R+ E LYK
Sbjct: 383 FGIAILVFTVFIKLAMFPLANKSYKAMSKMKKLQPKMKELQERFGDDRTRLNQEMMALYK 442
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
NP++GCLP + IPV+ LY+ L V E + WI L+ P + +
Sbjct: 443 REKANPVSGCLPIVVQIPVFFALYKVLF-VTLEMRHAPFYGWIHDLSAP-------DPTS 494
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I LF + PP + VLP+++ V+ Y+ K+ N P + N L
Sbjct: 495 IFNLFGLLPYTPP----EFLMIGVLPLIMGVTMYLQQKL-----NPAPPDPMQAKIMNML 545
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGA 339
P++ + P+GL LYW NN LS AQQ + + GA
Sbjct: 546 PIVFTFLLAHFPAGLVLYWAWNNTLSIAQQWIIMRRAGA 584
>gi|337293464|emb|CCB91453.1| Inner membrane protein oxaA [Waddlia chondrophila 2032/99]
Length = 822
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 125/255 (49%), Gaps = 38/255 (14%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W S I+ L VL H+ ++G +IILLT+ ++ +PL +S + M+
Sbjct: 570 WFSFISAPFSKFLFVLMKFFH--HLTGSWGISIILLTIALRVMLYPLNAWSTKSMLKMQQ 627
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+V+AIQE++ D ++ QLE LY G+NP++GC P L +P IG++ L + +
Sbjct: 628 LQPEVQAIQEKHKKDPKKAQLEVTNLYMSRGVNPISGCFPMLIQLPFLIGMFDLLKSTFE 687
Query: 213 EGLLTEGFF--WIPSLAGPTTIAARQNGSGISWLFP-FVDGHPPLGWSDTFAYLVLPVLL 269
L F WI +LA P + SW P F G+ + +LP+LL
Sbjct: 688 --LRGAPFIPGWIDNLAAPDVL--------FSWKTPIFFIGN---------QFHLLPILL 728
Query: 270 VVSQYISVKIIQSSQNNDPNMKSSQ---------ALTNFLPLMIGYFALSVPSGLSLYWF 320
V +I + + S+ DPN+ + Q +T +M +F PSGL++YW
Sbjct: 729 GVVMFIQQRTM-SNAPKDPNLMTEQQRQQRTMGTMMTAVFSVMFYHF----PSGLNIYWL 783
Query: 321 TNNLLSTAQQVWLQK 335
++ LL QQ W Q+
Sbjct: 784 SSMLLGILQQWWTQR 798
>gi|433482650|ref|ZP_20439905.1| membrane protein insertase, YidC/Oxa1 family protein [Neisseria
meningitidis 2006087]
gi|432214670|gb|ELK70567.1| membrane protein insertase, YidC/Oxa1 family protein [Neisseria
meningitidis 2006087]
Length = 545
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 102/214 (47%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI++LT+IVKA +PLT S MR+ AP+++AI+E+Y D+ Q +LYK
Sbjct: 354 WGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDRMAQQQAMMQLYK 413
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY AL ++ RQ
Sbjct: 414 DEKINPLGGCLPMLLQIPVFIGLYWALF---------------------ASVELRQA--- 449
Query: 241 ISWLFPFVDGHPPLGW----SDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P LGW S + Y +LP+++ + + Q+ N P +
Sbjct: 450 -----------PWLGWITDLSRSDPYYILPIIMAATMF-----AQTYLNPPPTDPMQAKM 493
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ P+GL LYW NNLL+ AQQ
Sbjct: 494 MKIMPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 527
>gi|89074710|ref|ZP_01161168.1| putative inner membrane protein translocase component YidC
[Photobacterium sp. SKA34]
gi|89049474|gb|EAR55035.1| putative inner membrane protein translocase component YidC
[Photobacterium sp. SKA34]
Length = 230
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 106/213 (49%), Gaps = 41/213 (19%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII+LT+IV+ +PLTK Q S MR L P+++A++ER+ D++R E LYK
Sbjct: 37 WGIAIIILTLIVRGLMYPLTKAQYTSMAKMRMLQPKIQAMRERFGDDRQRQSQEMMELYK 96
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPL GCLP L +P++I LY L N++ E F WI +L+
Sbjct: 97 TEKVNPLGGCLPLLIQMPIFIALYTVL-NLSTELRNAPFFGWIQNLSAQD---------- 145
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKS---SQALT 297
Y VLP+L+ +S + Q N P+ + Q +
Sbjct: 146 --------------------PYYVLPILMGISMFF-------IQKNSPSAVTDPMQQKIM 178
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
F+P++ F L P+GL LYW T+N+++ QQ
Sbjct: 179 TFMPVIFTVFFLYFPAGLVLYWLTSNIVTLIQQ 211
>gi|375335444|ref|ZP_09776788.1| inner membrane protein oxaA [Succinivibrionaceae bacterium WG-1]
Length = 296
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 116/239 (48%), Gaps = 38/239 (15%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
WLS I+ + LK + G+S L++ +G AII+LT V+ +PLTKKQ S MR
Sbjct: 78 WLSFISVFLFKCLKWIYAGLSYLNIA-NWGLAIIILTFCVRGLMYPLTKKQYVSMAKMRL 136
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP++ ++ERY D++R+ +E LYK NPL GCLP L +P++I LY L +
Sbjct: 137 LAPKLNELKERYKNDRQRLSMEMMELYKRENANPLGGCLPLLIQMPIFIALYWTLMESTE 196
Query: 213 EGLLTEGF-FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVV 271
L + F WI L+ H P Y VLP+L+ V
Sbjct: 197 --LRHQPFVLWIRDLS----------------------VHDP--------YFVLPILMGV 224
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+ ++ K+ + + K A+ M YF P+GL++YW +N +S QQ
Sbjct: 225 TMFLLQKMSPTPITDPMQKKIMTAMPIVFTAMFCYF----PAGLTIYWVVSNTVSIIQQ 279
>gi|224532140|ref|ZP_03672772.1| inner membrane protein OxaA [Borrelia valaisiana VS116]
gi|224511605|gb|EEF82011.1| inner membrane protein OxaA [Borrelia valaisiana VS116]
Length = 544
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 118/235 (50%), Gaps = 24/235 (10%)
Query: 101 METVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAI 160
M+ V++V D + +G +II LT++V+ FPLT K ++ + L P++K +
Sbjct: 329 MQMVMQVFYDVIPN------WGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKEL 382
Query: 161 QERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF 220
Q ++ D +++ E RLYK G+NPL GC P + +P++ LY ++N+ L G
Sbjct: 383 QVKFKHDPKKLNEEMGRLYKEEGVNPLGGCFPVILQLPIFFALYSLVNNL----FLLRGA 438
Query: 221 FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII 280
+IP +I G F + W+D +LP +++ +Q S I
Sbjct: 439 SFIPGWIDDLSIGDSVYHFGYKLYF--------VSWTDI---RILPFIMMFTQLGST--I 485
Query: 281 QSSQNNDPNMKSSQALTNF-LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
SS + N+ + Q F +P+M + ++PSGL +YW T N+ + QQ +++
Sbjct: 486 VSSNIDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLVYWITTNIFTILQQYYIR 540
>gi|300024925|ref|YP_003757536.1| YidC/Oxa1 family membrane protein insertase [Hyphomicrobium
denitrificans ATCC 51888]
gi|299526746|gb|ADJ25215.1| membrane protein insertase, YidC/Oxa1 family [Hyphomicrobium
denitrificans ATCC 51888]
Length = 624
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 119/224 (53%), Gaps = 21/224 (9%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+ +G I++LTV+VKAA +PL KQ ES M+ L P+++ I+E+Y D +R Q E L
Sbjct: 394 HNFGITILILTVLVKAAFYPLANKQYESMARMKKLQPEMQRIKEQYKDDTQRQQKEIFEL 453
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQN 237
Y+ INPLAGC P L IPV+ LY+ L D + FF WI L+ P + N
Sbjct: 454 YRTQKINPLAGCWPILLQIPVFFALYKVLFVTID--MRHAPFFGWIHDLSAPDPTSLF-N 510
Query: 238 GSGISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
G L PF S TF ++ V P+++ V+ ++ +++ N Q +
Sbjct: 511 LFG---LLPFD--------SPTFLHIGVWPLIMGVTMWMQMQL-----NPPQPDPIQQQI 554
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
++P++ + S P+GL +YW +N LS QQV + K GA+
Sbjct: 555 FQWMPVVFTFMLASFPAGLVIYWAWSNTLSILQQVRINKKNGAE 598
>gi|90419893|ref|ZP_01227802.1| putative inner membrane protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90335934|gb|EAS49682.1| putative inner membrane protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 609
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 113/220 (51%), Gaps = 17/220 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+ +TV++K FPL K +S M+++ P++ ++ER+ D+++ Q E R+Y+
Sbjct: 387 FGVAILAVTVVLKLIFFPLANKSYKSMARMKNMQPKIMEMRERFKDDKQKQQQEMMRIYR 446
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INP AGC P L IPV+ LY+ L V E F WI LA P + +
Sbjct: 447 EEKINPAAGCWPILIQIPVFFALYKVLY-VTIEMRHAPFFGWIQDLAAP-------DPTS 498
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I LF G PL V P+L+ ++ ++ +++ N P + Q + ++
Sbjct: 499 IFNLF----GLIPLELPHLLMVGVWPILMGITMFVQMRL-----NPTPPDPTQQMIFTWM 549
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
P++ + S P+GL +YW NNLLS QQ + K G K
Sbjct: 550 PVVFTFMLASFPAGLVIYWTWNNLLSVIQQSVIMKRNGTK 589
>gi|297621235|ref|YP_003709372.1| inner membrane protein translocase component YidC [Waddlia
chondrophila WSU 86-1044]
gi|297376536|gb|ADI38366.1| inner membrane protein translocase component YidC [Waddlia
chondrophila WSU 86-1044]
Length = 822
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 125/255 (49%), Gaps = 38/255 (14%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W S I+ L VL H+ ++G +IILLT+ ++ +PL +S + M+
Sbjct: 570 WFSFISAPFSKFLFVLMKFFH--HLTGSWGISIILLTIALRVMLYPLNAWSTKSMLKMQQ 627
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+V+AIQE++ D ++ QLE LY G+NP++GC P L +P IG++ L + +
Sbjct: 628 LQPEVQAIQEKHKKDPKKAQLEVTNLYMSRGVNPISGCFPMLIQLPFLIGMFDLLKSTFE 687
Query: 213 EGLLTEGFF--WIPSLAGPTTIAARQNGSGISWLFP-FVDGHPPLGWSDTFAYLVLPVLL 269
L F WI +LA P + SW P F G+ + +LP+LL
Sbjct: 688 --LRGAPFIPGWIDNLAAPDVL--------FSWKTPIFFIGN---------QFHLLPILL 728
Query: 270 VVSQYISVKIIQSSQNNDPNMKSSQ---------ALTNFLPLMIGYFALSVPSGLSLYWF 320
V +I + + S+ DPN+ + Q +T +M +F PSGL++YW
Sbjct: 729 GVVMFIQQRTM-SNAPKDPNLMTEQQRQQRTMGTMMTAVFSVMFYHF----PSGLNIYWL 783
Query: 321 TNNLLSTAQQVWLQK 335
++ LL QQ W Q+
Sbjct: 784 SSMLLGILQQWWTQR 798
>gi|406929761|gb|EKD65272.1| 60 kDa inner membrane insertion protein [uncultured bacterium]
Length = 270
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 128/285 (44%), Gaps = 65/285 (22%)
Query: 97 ITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQ 156
+ N + +L + + + +PY GF+I++LT+I++ A +PL Q++++ M+ L+P
Sbjct: 8 LINPIANILIGVYNALLFFSIPYTLGFSIVILTIIIRFAMYPLMSTQIKAAKKMQELSPH 67
Query: 157 VKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRAL---SNVADE 213
+ ++ER+ GD +RIQ ET RLYK G+NP AGCLP L IPV LY L S ++
Sbjct: 68 LSKVKERHKGDAKRIQSETMRLYKEHGVNPAAGCLPILIQIPVIWALYLVLQKFSALSSN 127
Query: 214 GLLTE------------------GFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLG 255
+++E FF +P P+T+ + G I +L PF G
Sbjct: 128 SVVSEVNRIVYFDFLKIDKAWDATFFGLPLGQNPSTLLSSV-GVAI-FLIPFATGF---- 181
Query: 256 WSDTFAYLVLPVLLVVSQYISVKIIQSSQN------------NDPNMKSSQALTNFLPLM 303
Q+I K++ ++ +D Q P+M
Sbjct: 182 ----------------FQFIQSKMMMPHKDTKKSPAPKVEKKDDFATAFQQQSLYIFPIM 225
Query: 304 IGYFALSVPSGLSLYWFTNNLLSTAQQ----------VWLQKFGG 338
IG+F+ + P LSLYW T + QQ WL K G
Sbjct: 226 IGFFSYTFPIALSLYWNTFTIFGIIQQHRISGPGGLRSWLSKING 270
>gi|402833257|ref|ZP_10881877.1| 60Kd inner membrane protein [Selenomonas sp. CM52]
gi|402281249|gb|EJU29940.1| 60Kd inner membrane protein [Selenomonas sp. CM52]
Length = 222
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 113/215 (52%), Gaps = 37/215 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG AIILLT+++K +PLT KQV S M+ L P++K +QE+Y + + +Q + LYK
Sbjct: 34 YGIAIILLTILIKVCLYPLTVKQVRSMKGMQELQPKMKKLQEKYKDNPQMMQQKIGELYK 93
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
AG+NPLAGCLP L +P+ +G++ AL A G T F W+ SL+ P
Sbjct: 94 EAGVNPLAGCLPLLIQMPILMGMFYALQGYAYSG--TPSFLWLASLSEP----------- 140
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
D H +LPVL +S + K Q+S + MK + +
Sbjct: 141 --------DPH-----------YILPVLSALSTWFVQK--QTSTETNQQMK---IMMIVM 176
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P+ IG+ +L+ SGL LYW T NL+ QQ W+ +
Sbjct: 177 PIFIGWISLNFASGLVLYWVTMNLVQIVQQWWMYR 211
>gi|416198838|ref|ZP_11619205.1| inner membrane protein OxaA [Neisseria meningitidis CU385]
gi|325139560|gb|EGC62100.1| inner membrane protein OxaA [Neisseria meningitidis CU385]
Length = 545
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 102/214 (47%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI++LT+IVKA +PLT S MR+ AP+++AI+E+Y D+ Q +LYK
Sbjct: 354 WGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDRMAQQQAMMQLYK 413
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY AL ++ RQ
Sbjct: 414 DEKINPLGGCLPMLLQIPVFIGLYWALF---------------------ASVELRQ---- 448
Query: 241 ISWLFPFVDGHPPLGW----SDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P LGW S + Y +LP+++ V+ + Q+ N P +
Sbjct: 449 ----------APWLGWITDLSRSDPYYILPIIMAVTMF-----AQTFLNPPPTDPMQAKM 493
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ P+GL LYW NNLL+ QQ
Sbjct: 494 MKIMPLVFSVMFFFFPAGLVLYWVVNNLLTITQQ 527
>gi|225849760|ref|YP_002729994.1| inner membrane protein OxaA [Persephonella marina EX-H1]
gi|225644791|gb|ACO02977.1| inner membrane protein OxaA [Persephonella marina EX-H1]
Length = 537
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 42/232 (18%)
Query: 115 LHVPYAY----GFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQER 170
+H Y Y G II+LTV+++ FPL K +++ M LAP++K +Q++Y D ++
Sbjct: 341 MHFIYDYIHNWGLTIIILTVLLRIVLFPLNHKSLKAMKKMADLAPEIKKLQKKYQKDPQK 400
Query: 171 IQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPT 230
+Q E +LY G NP++GCLP +A IP++I LY L + ++ F W+ LA
Sbjct: 401 LQEEMMKLYAEHGTNPMSGCLPIVAQIPIFIALYNVLMVTVELKMVP--FLWVQDLA--- 455
Query: 231 TIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNM 290
D P Y +LP+L+ VS I SS N
Sbjct: 456 ------------------DKDP---------YYILPILMGVSMIAQQWITPSSDKN---- 484
Query: 291 KSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDP 342
+ + + + + ++ P+GL LYW TNN+L Q + K G P
Sbjct: 485 --QKIIMYIMAFVFTFLFMNFPAGLVLYWLTNNILGIGQSFIVNKQMGLYKP 534
>gi|330447273|ref|ZP_08310923.1| inner-membrane protein insertion factor [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328491464|dbj|GAA05420.1| inner-membrane protein insertion factor [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 544
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 106/211 (50%), Gaps = 37/211 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII+LT IV+ A +PLTK Q S MR L P+++A++ER D++R+ E LYK
Sbjct: 351 WGIAIIVLTFIVRGAMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDRQRMSQEMMELYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGS 239
+NPL GCLP L +P++I LY AL + L FF WI L+
Sbjct: 411 KEKVNPLGGCLPILLQMPIFIALYWALMESVE--LRHAPFFGWIHDLSAQD--------- 459
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
Y VLP+L+ ++ + ++ + S DP Q + F
Sbjct: 460 ---------------------PYYVLPILMGITMFF-IQKMSPSTVTDP---MQQKIMTF 494
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+P+M +F L PSGL LYW +N+++ QQ
Sbjct: 495 MPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQ 525
>gi|383789250|ref|YP_005473824.1| membrane protein insertase [Spirochaeta africana DSM 8902]
gi|383105784|gb|AFG36117.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
protein [Spirochaeta africana DSM 8902]
Length = 600
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 134/265 (50%), Gaps = 26/265 (9%)
Query: 74 ADAAVSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVK 133
D A+ S +S +L N+++++L+ + V YG +I+++T++VK
Sbjct: 332 GDNALGVSGLELEEIMDSRFLGWFENILKSLLEAI------YRVVPNYGVSIVIMTILVK 385
Query: 134 AATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPT 193
+PLTKK ES+ ++L P+++ ++E+Y E++ E +YK G+NPL GC P
Sbjct: 386 LLLWPLTKKSFESTAKSQALQPKIQELREKYKDKPEKLNAEMMAMYKKEGVNPLGGCFPM 445
Query: 194 LATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGH-- 251
L +P+ + ++ +N D T WI L+ P +I F F D
Sbjct: 446 LLQMPLLLAMFGLFNNHFDLRGATFIPGWIEDLSAPESI------------FYFGDYFSL 493
Query: 252 PPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSV 311
P LGW+D +LP+L V SQ + + Q + +++ K T F+P+M + ++
Sbjct: 494 PILGWTDI---RLLPILFVASQLLFGRFSQPAGSSNSQAK---MFTTFMPIMFFFILYNM 547
Query: 312 PSGLSLYWFTNNLLSTAQQVWLQKF 336
PSGL +YW N+LS QQ+ K+
Sbjct: 548 PSGLLVYWIITNILSVVQQLGTTKY 572
>gi|297200935|ref|ZP_06918332.1| membrane protein [Streptomyces sviceus ATCC 29083]
gi|197716893|gb|EDY60927.1| membrane protein [Streptomyces sviceus ATCC 29083]
Length = 428
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 121/229 (52%), Gaps = 24/229 (10%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L ++++ PL KQ++S+ AM++L P++K IQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKSTRAMQTLQPEMKKIQERYKNDKQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADE---GLLTEGFFWIPSLAGPTTIAAR 235
YK G NPL+ CLP LA P + LY L+ +A G++ E LA A +
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLNGIATGDTIGVINESL-----LAS----ARK 146
Query: 236 QNGSGISWLFPFVDGHP---PLGWSDTFAYLVLPVLLVV---SQYISVKIIQSSQNND-- 287
+ G F DG LG + T +V V++V+ SQ+ + + + ++N D
Sbjct: 147 AHIFGAPLAAKFKDGSATVQALGATVTDVRVVTAVMIVMMSASQFYTQRQLM-TKNVDTT 205
Query: 288 ---PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P+M F ++ P G+ +YW T N+ + QQ+++
Sbjct: 206 VKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTMGQQMYV 254
>gi|152993157|ref|YP_001358878.1| inner membrane protein translocase component YidC [Sulfurovum sp.
NBC37-1]
gi|151425018|dbj|BAF72521.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 539
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 104/215 (48%), Gaps = 42/215 (19%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIIL T++VK FPL+ K + S ++ LAP++K ++ +Y GD ++ + LYK
Sbjct: 337 WGWAIILFTLLVKLTLFPLSYKGMMSMQKLKDLAPKMKDLKAKYKGDPAKLNAQMMELYK 396
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NP+ GCLP + IPV+ LYR L N ADE +G WIP
Sbjct: 397 KNGANPMGGCLPMILQIPVFFALYRVLLN-ADE---LQGAAWIP---------------- 436
Query: 241 ISWLFPFVDGHPPLGWSDTFA----YLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
GW + A Y VLPVL+ +S + +I + NN + +
Sbjct: 437 --------------GWINNLAVADPYYVLPVLMGISMWFQQRI---TPNNFTDPLQEKIF 479
Query: 297 TNFLPLMIGYF-ALSVPSGLSLYWFTNNLLSTAQQ 330
F LM G F + PSGL LYW NN + QQ
Sbjct: 480 KWFPVLMAGMFIIMPFPSGLVLYWVVNNTFTIGQQ 514
>gi|374988135|ref|YP_004963630.1| putative inner membrane protein translocase component YidC
[Streptomyces bingchenggensis BCW-1]
gi|297158787|gb|ADI08499.1| putative inner membrane protein translocase component YidC
[Streptomyces bingchenggensis BCW-1]
Length = 387
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 123/224 (54%), Gaps = 14/224 (6%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L V+++ PL KQ++++ M++L P++KAIQERY D++R E +L
Sbjct: 33 WAWGLSIVSLVVLIRICLIPLFVKQIKATRNMQALQPKMKAIQERYKSDRQRQSEEMMKL 92
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNG 238
YK G NPL+ CLP LA P +I LY+ L+++A+ T GF I + +A G
Sbjct: 93 YKETGTNPLSSCLPILAQSPFFISLYQVLNHIANN--RTVGF--IDQSLLDSARSAHIFG 148
Query: 239 SGISWLF-PFVDGHPPLGWSDT---FAYLVLPVLLVVSQYISVKIIQSSQNND-----PN 289
+ +S F LG S T +V+ VL+ SQ+ + + + ++N D P
Sbjct: 149 APLSVKFMSSASKVESLGASLTDVRVVTIVMIVLMSASQFFTQRQLM-TKNVDLTVKTPF 207
Query: 290 MKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
M+ + L P+M F ++ P G+ +YW T N+ + QQ+++
Sbjct: 208 MQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTMGQQMFV 251
>gi|260887480|ref|ZP_05898743.1| stage III sporulation protein J [Selenomonas sputigena ATCC 35185]
gi|330840118|ref|YP_004414698.1| membrane protein insertase, YidC/Oxa1 family [Selenomonas sputigena
ATCC 35185]
gi|260862767|gb|EEX77267.1| stage III sporulation protein J [Selenomonas sputigena ATCC 35185]
gi|329747882|gb|AEC01239.1| membrane protein insertase, YidC/Oxa1 family [Selenomonas sputigena
ATCC 35185]
Length = 222
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 113/215 (52%), Gaps = 37/215 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG AIILLT+++K +PLT KQV S M+ L P++K +QE+Y + + +Q + LYK
Sbjct: 34 YGIAIILLTILIKVCLYPLTVKQVRSMKGMQELQPKMKKLQEKYKDNPQMMQQKIGELYK 93
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
AG+NPLAGCLP L +P+ +G++ AL A G T F W+ SL+ P
Sbjct: 94 EAGVNPLAGCLPLLIQMPILMGMFYALQGYAYSG--TPSFLWLASLSEP----------- 140
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
D H +LPVL +S + K Q+S + MK + +
Sbjct: 141 --------DPH-----------YILPVLSALSTWFVQK--QTSTETNQQMK---IMMIVM 176
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P+ IG+ +L+ SGL LYW T NL+ QQ W+ +
Sbjct: 177 PIFIGWISLNFASGLVLYWVTMNLVQIVQQWWMYR 211
>gi|296314151|ref|ZP_06864092.1| membrane protein insertase, YidC/Oxa1 family [Neisseria
polysaccharea ATCC 43768]
gi|296839184|gb|EFH23122.1| membrane protein insertase, YidC/Oxa1 family [Neisseria
polysaccharea ATCC 43768]
Length = 545
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 101/214 (47%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI++LT+IVKA +PLT S MR+ AP+++AI+E+Y D+ Q +LYK
Sbjct: 354 WGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDRMAQQQAMMQLYK 413
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY AL ++ RQ
Sbjct: 414 DEKINPLGGCLPMLLQIPVFIGLYWALF---------------------ASVELRQ---- 448
Query: 241 ISWLFPFVDGHPPLGW----SDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P LGW S Y +LP+++ + + Q+ N P +
Sbjct: 449 ----------APWLGWITDLSRADPYYILPIIMAATMF-----AQTYLNPPPTDPMQAKM 493
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ P+GL LYW NNLL+ AQQ
Sbjct: 494 MKIMPLIFSVMFFFFPAGLVLYWVVNNLLTIAQQ 527
>gi|134297399|ref|YP_001121134.1| putative inner membrane protein translocase component YidC
[Burkholderia vietnamiensis G4]
gi|387903676|ref|YP_006334015.1| inner membrane protein translocase component YidC [Burkholderia sp.
KJ006]
gi|166975857|sp|A4JJ46.1|YIDC_BURVG RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|134140556|gb|ABO56299.1| protein translocase subunit yidC [Burkholderia vietnamiensis G4]
gi|387578568|gb|AFJ87284.1| Inner membrane protein translocase component YidC [Burkholderia sp.
KJ006]
Length = 554
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 37/221 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 366 WGWAIVLLTILIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 425
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 426 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 460
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D L D F +LPVL+ VS Y +Q+S N P + F+
Sbjct: 461 APWILWIHD----LSQRDPF--FILPVLMAVSMY-----VQTSLNPTPPDPVQAKMMKFM 509
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAK 340
P+ P+GL LY+ NN+LS AQQ ++ +K GG K
Sbjct: 510 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGVK 550
>gi|90581131|ref|ZP_01236930.1| putative inner membrane protein translocase component YidC
[Photobacterium angustum S14]
gi|90437652|gb|EAS62844.1| putative inner membrane protein translocase component YidC [Vibrio
angustum S14]
Length = 544
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 129/279 (46%), Gaps = 48/279 (17%)
Query: 53 PNSADGVKELLGVAERLLFTLADAAVSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGM 112
P + +K L V +L +A A + + V + WL I N + +L + +
Sbjct: 294 PGQSKEIKATLWVGPKLQNEMAATAKNLNLTV-----DYGWLWFIANPLHKLLSFIHSLV 348
Query: 113 STLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQ 172
+G AII+LT IV+ A +PLTK Q S MR L P+++A++ER D++R
Sbjct: 349 GN------WGIAIIILTFIVRGAMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDRQRQS 402
Query: 173 LETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTT 231
E LYK +NPL GCLP L +P++I LY AL + L FF WI L+
Sbjct: 403 QEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVE--LRHAPFFGWIHDLSAQD- 459
Query: 232 IAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMK 291
Y VLP+L+ ++ + ++ + S DP
Sbjct: 460 -----------------------------PYYVLPILMGITMFF-IQKMSPSTVTDP--- 486
Query: 292 SSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
Q + F+P+M +F L PSGL LYW +N+++ QQ
Sbjct: 487 MQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQ 525
>gi|421479883|ref|ZP_15927544.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
multivorans CF2]
gi|400222047|gb|EJO52453.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
multivorans CF2]
Length = 494
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 107/221 (48%), Gaps = 37/221 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 306 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKNDPQKMNAALMELYK 365
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 366 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 400
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D S Y +LPVL+ VS Y +Q+S N P + F+
Sbjct: 401 APWILWIHD------LSQRDPYFILPVLMAVSMY-----VQTSLNPTPPDPVQAKMMKFM 449
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAK 340
P+ P+GL LY+ NN+LS AQQ ++ +K GG K
Sbjct: 450 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGVK 490
>gi|406988836|gb|EKE08707.1| hypothetical protein ACD_17C00036G0001 [uncultured bacterium]
Length = 616
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 130/272 (47%), Gaps = 30/272 (11%)
Query: 72 TLADAAVSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLH-VPYAYGFAIILLTV 130
T D A + + T W S I+ L L MS H + ++ +IILLT+
Sbjct: 358 TYDDPAKNYNPHYTQAITIQGWFSFISQPFSKFLFYL---MSLFHSISRSWAVSIILLTI 414
Query: 131 IVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGC 190
++A +PL + S + + LAP+VKAI+ +Y D + ++ET LY+ G+NPL GC
Sbjct: 415 ALRAMMYPLNAWSIRSGIKTQELAPKVKAIENKYKKDPAKTKIETMNLYRQEGVNPLTGC 474
Query: 191 LPTLATIPVWIGLYRAL-SNVADEG-LLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFV 248
LP L T+P +G++ L S+ G L G WI L+ P + SW
Sbjct: 475 LPLLLTMPFLLGMFYLLKSSFPLRGALFIPG--WIDDLSAPDVL--------FSW----- 519
Query: 249 DGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQS-----SQNNDPNMKSSQALTNFLPLM 303
G P + F + LP+L+ ++ Y+ K SQ +D K + + N + ++
Sbjct: 520 -GQPLWFIGNEFHF--LPILMGLTMYLQQKFTSKLPKDVSQLSD-TQKQQKMMGNMMVVI 575
Query: 304 IGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+ PSGL+LY+ + LL AQQ W+ K
Sbjct: 576 FTVMFYNFPSGLNLYFMISTLLGVAQQAWMTK 607
>gi|386853846|ref|YP_006203131.1| inner membrane protein translocase component YidC [Borrelia garinii
BgVir]
gi|365193880|gb|AEW68778.1| Putative inner membrane protein translocase component YidC
[Borrelia garinii BgVir]
Length = 544
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 118/235 (50%), Gaps = 24/235 (10%)
Query: 101 METVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAI 160
M+ V++V D + +G +II LT++V+ FPLT K ++ + L P++K +
Sbjct: 329 MQMVMQVFYDVIPN------WGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKEL 382
Query: 161 QERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF 220
Q ++ D +++ E RLYK G+NPL GC P + +P++ LY ++N+ L G
Sbjct: 383 QVKFKHDPKKLNEEMGRLYKEEGVNPLGGCFPVILQLPIFFALYSLVNNL----FLLRGA 438
Query: 221 FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII 280
+IP +I G F + W+D +LP +++ +Q S I
Sbjct: 439 SFIPGWIDDLSIGDSVYHFGYRLYF--------VSWTDI---RILPFIMMFTQLGST--I 485
Query: 281 QSSQNNDPNMKSSQALTNF-LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
SS + N+ + Q F +P+M + ++PSGL +YW T N+ + QQ +++
Sbjct: 486 VSSNLDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIK 540
>gi|381166572|ref|ZP_09875786.1| Inner membrane protein oxaA [Phaeospirillum molischianum DSM 120]
gi|380684145|emb|CCG40598.1| Inner membrane protein oxaA [Phaeospirillum molischianum DSM 120]
Length = 573
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 121/249 (48%), Gaps = 25/249 (10%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W +T +L++L + + G AI+ LTVI+K A FPL K S M+
Sbjct: 348 WFYFLTKPFFYMLQILHSALGNM------GLAILALTVILKLAMFPLANKSYVSMSKMKK 401
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P V+A+Q R+ D+ R+Q E LYK +NPL+GCLP L IPV+ LY+ L V
Sbjct: 402 LQPAVQALQARFGEDKMRLQQEMMILYKKEKVNPLSGCLPVLVQIPVFFALYKVLF-VTI 460
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVL-PVLLVV 271
E + WI L+ Q+ + I LF + P +F +L L P+++ V
Sbjct: 461 EMRHAPFYGWIHDLSA-------QDPTNIFTLFGLLPWTTP-----SFLHLGLWPLIMGV 508
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
+ Y K+ N P + +FLP++ + + SGL +YW NN LS AQQ
Sbjct: 509 TMYFQQKL-----NPQPPDPVQAKVLSFLPILFTFLLANFSSGLVIYWAWNNALSIAQQW 563
Query: 332 WLQKFGGAK 340
+ + G K
Sbjct: 564 MIMRRLGVK 572
>gi|421473487|ref|ZP_15921593.1| membrane protein insertase, YidC/Oxa1 family, partial [Burkholderia
multivorans ATCC BAA-247]
gi|400220820|gb|EJO51326.1| membrane protein insertase, YidC/Oxa1 family, partial [Burkholderia
multivorans ATCC BAA-247]
Length = 502
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 107/221 (48%), Gaps = 37/221 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 314 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKNDPQKMNAALMELYK 373
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 374 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 408
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D S Y +LPVL+ VS Y +Q+S N P + F+
Sbjct: 409 APWILWIHD------LSQRDPYFILPVLMAVSMY-----VQTSLNPTPPDPVQAKMMKFM 457
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAK 340
P+ P+GL LY+ NN+LS AQQ ++ +K GG K
Sbjct: 458 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGVK 498
>gi|451947365|ref|YP_007467960.1| protein translocase subunit yidC [Desulfocapsa sulfexigens DSM
10523]
gi|451906713|gb|AGF78307.1| protein translocase subunit yidC [Desulfocapsa sulfexigens DSM
10523]
Length = 550
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 110/210 (52%), Gaps = 24/210 (11%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG AIIL+T+I KA +P+T+K ++S M+ L P++ ++E+Y GD ++ E LYK
Sbjct: 356 YGIAIILVTIIFKAIFWPITQKGLKSMKNMQKLQPKMAKLKEKYKGDPTKMNQEVMNLYK 415
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPL GCLP + IPV+ LY+ L + E WI L+ P + G
Sbjct: 416 TYKVNPLGGCLPMVLQIPVFFALYKVLL-MCIELRHAPFMLWITDLSAPDRLFI-----G 469
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I P+V G P VL +L+ S ++ K+ ++ DP + + FL
Sbjct: 470 ID--IPYVGGIP-----------VLTLLMGGSMFLQQKMTPTTA--DP---TQAKIMMFL 511
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
P++ + ++ SGL LYWF NNLL+ QQ
Sbjct: 512 PVLFTFMFINFASGLVLYWFVNNLLAIFQQ 541
>gi|408671059|ref|YP_006871130.1| inner membrane protein translocase [Borrelia garinii NMJW1]
gi|407240881|gb|AFT83764.1| putative inner membrane protein translocase [Borrelia garinii
NMJW1]
Length = 544
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 118/235 (50%), Gaps = 24/235 (10%)
Query: 101 METVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAI 160
M+ V++V D + +G +II LT++V+ FPLT K ++ + L P++K +
Sbjct: 329 MQMVMQVFYDVIPN------WGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKEL 382
Query: 161 QERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF 220
Q ++ D +++ E RLYK G+NPL GC P + +P++ LY ++N+ L G
Sbjct: 383 QVKFKHDPKKLNEEMGRLYKEEGVNPLGGCFPVILQLPIFFALYSLVNNL----FLLRGA 438
Query: 221 FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII 280
+IP +I G F + W+D +LP +++ +Q S I
Sbjct: 439 SFIPGWIDDLSIGDSVYHFGYRLYF--------VSWTDI---RILPFIMMFTQLGST--I 485
Query: 281 QSSQNNDPNMKSSQALTNF-LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
SS + N+ + Q F +P+M + ++PSGL +YW T N+ + QQ +++
Sbjct: 486 VSSNLDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIK 540
>gi|384227471|ref|YP_005619216.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
gi|345538411|gb|AEO08388.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
Length = 536
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 118/239 (49%), Gaps = 42/239 (17%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
WL ++ + +L +L + + +GF+IIL+T I+KA T+PLTK Q S + MR+
Sbjct: 328 WLWFLSQPLFKLLTILHNVVGN------WGFSIILITFIMKAVTYPLTKAQYVSMLKMRA 381
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P++K I+E+++ D++RI E LYK INPL G LP +P+++ LY L +
Sbjct: 382 LQPKIKEIKEKFSNDKQRISQEMIVLYKKEKINPLTGFLPIFIQMPIFLSLYYML--IGS 439
Query: 213 EGLLTEGF-FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVV 271
L F WI L+ Y VLP+++ +
Sbjct: 440 VELRHAPFLLWIHDLSSQD------------------------------PYYVLPIIMGL 469
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+ + K ++ +DP K + NF+P++ F L PSGL LY+ +NL++ QQ
Sbjct: 470 TMFFIQKTSSANHVSDPFQKK---IMNFMPVIFTAFFLWFPSGLVLYYIISNLVTIIQQ 525
>gi|256548861|gb|ACU82912.1| 60 kD inner-membrane protein [Buchnera aphidicola (Acyrthosiphon
kondoi)]
Length = 537
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 118/239 (49%), Gaps = 42/239 (17%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
WL ++ + +L +L + + +GF+IIL+T I+KA T+PLTK Q S + MR+
Sbjct: 329 WLWFLSQPLFKLLTILHNVVGN------WGFSIILITFIMKAVTYPLTKAQYVSMLKMRA 382
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P++K I+E+++ D++RI E LYK INPL G LP +P+++ LY L +
Sbjct: 383 LQPKIKEIKEKFSNDKQRISQEMIVLYKKEKINPLTGFLPIFIQMPIFLSLYYML--IGS 440
Query: 213 EGLLTEGF-FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVV 271
L F WI L+ Y VLP+++ +
Sbjct: 441 VELRHAPFLLWIHDLSSQD------------------------------PYYVLPIIMGL 470
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+ + K ++ +DP K + NF+P++ F L PSGL LY+ +NL++ QQ
Sbjct: 471 TMFFIQKTSSANHVSDPFQKK---IMNFMPVIFTAFFLWFPSGLVLYYIISNLVTIIQQ 526
>gi|221201819|ref|ZP_03574856.1| inner membrane protein OxaA [Burkholderia multivorans CGD2M]
gi|221207675|ref|ZP_03580683.1| inner membrane protein OxaA [Burkholderia multivorans CGD2]
gi|221172521|gb|EEE04960.1| inner membrane protein OxaA [Burkholderia multivorans CGD2]
gi|221178239|gb|EEE10649.1| inner membrane protein OxaA [Burkholderia multivorans CGD2M]
Length = 543
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 107/221 (48%), Gaps = 37/221 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 355 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKNDPQKMNAALMELYK 414
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 415 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 449
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D S Y +LPVL+ VS Y +Q+S N P + F+
Sbjct: 450 APWILWIHD------LSQRDPYFILPVLMAVSMY-----VQTSLNPTPPDPVQAKMMKFM 498
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAK 340
P+ P+GL LY+ NN+LS AQQ ++ +K GG K
Sbjct: 499 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGVK 539
>gi|409123501|ref|ZP_11222896.1| membrane protein insertase [Gillisia sp. CBA3202]
Length = 618
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 112/213 (52%), Gaps = 27/213 (12%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YG AII++T++V+ P+T K S M+ L P++ + E+Y + + Q ET +LY
Sbjct: 374 SYGIAIIVMTIVVRIVLSPVTYKSYLSQAKMKVLKPEINELNEKYKDNAMKKQQETMKLY 433
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
AG +P++GCLP L IPV+ L++ + L +GF W LA TIA
Sbjct: 434 SKAGASPMSGCLPALMQIPVFYALFQFFPSAFQ--LRQKGFLWADDLASYDTIAE----- 486
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII--QSSQNND----PNMKSS 293
+ + PF H L P+L ++ +I + + Q+ QNN PNMK
Sbjct: 487 -LPFHIPFYGDHVSL----------FPILASIAIFIYMMMTTGQTMQNNQQPGMPNMKFI 535
Query: 294 QALTNFLPLMIGYFALSVPSGLSLYWFTNNLLS 326
L+ P+M+ +F + SGLSLY+FT+NL++
Sbjct: 536 MYLS---PIMMLFFFNNYASGLSLYYFTSNLIT 565
>gi|221214579|ref|ZP_03587549.1| inner membrane protein OxaA [Burkholderia multivorans CGD1]
gi|221165469|gb|EED97945.1| inner membrane protein OxaA [Burkholderia multivorans CGD1]
Length = 544
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 107/221 (48%), Gaps = 37/221 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 356 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKNDPQKMNAALMELYK 415
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 416 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 450
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D S Y +LPVL+ VS Y +Q+S N P + F+
Sbjct: 451 APWILWIHD------LSQRDPYFILPVLMAVSMY-----VQTSLNPTPPDPVQAKMMKFM 499
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAK 340
P+ P+GL LY+ NN+LS AQQ ++ +K GG K
Sbjct: 500 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGVK 540
>gi|386841271|ref|YP_006246329.1| inner membrane protein translocase component YidC [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|374101572|gb|AEY90456.1| putative inner membrane protein translocase component YidC
[Streptomyces hygroscopicus subsp. jinggangensis 5008]
gi|451794566|gb|AGF64615.1| putative inner membrane protein translocase component YidC
[Streptomyces hygroscopicus subsp. jinggangensis TL01]
Length = 422
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 119/229 (51%), Gaps = 24/229 (10%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L ++++ PL KQ++++ AM++L P++K IQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDKQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADE---GLLTEGFFWIPSLAGPTTIAAR 235
YK +G NPL+ CLP LA P + LY L+ +A G++ E A +
Sbjct: 96 YKESGTNPLSSCLPILAQSPFFFALYHVLNGIASGHTIGVINESLL---------ASARK 146
Query: 236 QNGSGISWLFPFVDGH---PPLGWSDT---FAYLVLPVLLVVSQYISVKIIQSSQNND-- 287
+ G F DG LG S T +++ VL+ SQ+ + + + ++N D
Sbjct: 147 AHIFGAPLAAKFKDGSDTIHALGASVTDVRVVTVIMIVLMSASQFYTQRQLM-TKNVDTT 205
Query: 288 ---PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P+M F ++ P G+ +YW T N+ + QQ+++
Sbjct: 206 VKTPFMQQQKMLMYVFPIMFAVFGINFPVGVLVYWLTTNVWTMGQQMYV 254
>gi|254375202|ref|ZP_04990682.1| inner-membrane protein [Francisella novicida GA99-3548]
gi|151572920|gb|EDN38574.1| inner-membrane protein [Francisella novicida GA99-3548]
Length = 551
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 109/213 (51%), Gaps = 37/213 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIIL+T ++K +PL+ K S MR L P++K +QE Y D++ + + LYK
Sbjct: 365 WGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKDDRQALGKKMMELYK 424
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPL+GCLP L IP++I LY L ++ RQ+
Sbjct: 425 EEKVNPLSGCLPMLIQIPIFISLYWVLLE---------------------SVELRQS--- 460
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
PF+ L D Y VLPVL+ +S ++ K+ S DP M++ + FL
Sbjct: 461 -----PFIFWIHDLSMKD--PYFVLPVLMGLSMFLQQKL--SPAPADP-MQAKVMM--FL 508
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P++ + S PSGL LYW TNNL+S +QQ W+
Sbjct: 509 PVIFTFLFASFPSGLVLYWLTNNLISISQQ-WI 540
>gi|407775415|ref|ZP_11122709.1| putative inner membrane protein translocase component YidC
[Thalassospira profundimaris WP0211]
gi|407281422|gb|EKF06984.1| putative inner membrane protein translocase component YidC
[Thalassospira profundimaris WP0211]
Length = 568
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 112/218 (51%), Gaps = 17/218 (7%)
Query: 116 HVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLET 175
H+ +G +I+++TVI+KA FPL K +S AM+ L PQ+ ++E++ D++R Q E
Sbjct: 362 HLVGNFGVSILIITVIIKAIMFPLANKSYKSMSAMKKLQPQITEMREKFKDDRQRQQQEM 421
Query: 176 ARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAAR 235
LYK INP +GCLP + IPV+ LY+ L V+ E F WI L+ P
Sbjct: 422 MALYKREKINPASGCLPIVVQIPVFFALYKVLF-VSIEMRHAPFFGWIQDLSAP------ 474
Query: 236 QNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
+ + + LF + PP V P+++ ++ ++ K+ N P +
Sbjct: 475 -DPTSLFNLFGLIPWDPP----QMLMIGVWPLIMGITMFLQQKL-----NPAPADPTQAK 524
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
+ FLP + + S P+GL +YW NN LS QQ ++
Sbjct: 525 IMMFLPFIFTFMLASFPAGLVIYWAWNNTLSIIQQRYI 562
>gi|384214937|ref|YP_005606101.1| hypothetical protein BJ6T_12220 [Bradyrhizobium japonicum USDA 6]
gi|354953834|dbj|BAL06513.1| hypothetical protein BJ6T_12220 [Bradyrhizobium japonicum USDA 6]
Length = 614
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 115/220 (52%), Gaps = 11/220 (5%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+L+TVIVK FPL K S M+S+ PQ++A++ER+ D+ + Q E +Y+
Sbjct: 390 FGISILLVTVIVKLLFFPLANKSYASMAKMKSIQPQLQALKERFPDDKVKQQQEMMEIYR 449
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INP+AGCLP + IPV+ LY+ L V E + WI L+ P N
Sbjct: 450 KEKINPVAGCLPVVIQIPVFFSLYKVLF-VTIEMRHAPFYGWIKDLSAPDP----TNLFT 504
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+ L PF P+ + A + P+++ ++ + +K+ N P + Q + N++
Sbjct: 505 LFGLIPFDPTTIPV-FGHYLALGIWPIIMGITMWFQMKL-----NPTPPDPTQQLIFNWM 558
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
PL+ + P+GL +YW NN LS QQ ++ + G K
Sbjct: 559 PLIFTFMLAGFPAGLVIYWAWNNTLSVLQQSFIMRRNGVK 598
>gi|27383209|ref|NP_774738.1| inner membrane protein translocase component YidC [Bradyrhizobium
japonicum USDA 110]
gi|38502983|sp|Q89BQ0.1|YIDC_BRAJA RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|27356383|dbj|BAC53363.1| blr8098 [Bradyrhizobium japonicum USDA 110]
Length = 616
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 114/220 (51%), Gaps = 11/220 (5%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+L+TVIVK FPL K S M+S+ PQ++A++ERY D+ + Q E +Y+
Sbjct: 392 FGISILLVTVIVKLLFFPLANKSYASMAKMKSIQPQLQALKERYPDDKVKQQQEMMEIYR 451
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INP+AGCLP + IPV+ LY+ L V E + WI L+ P N
Sbjct: 452 KEKINPVAGCLPVVIQIPVFFSLYKVLF-VTIEMRQAPFYGWIKDLSAPDP----TNLFN 506
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+ L P P+ + A + P+++ ++ + +K+ N P + Q + N++
Sbjct: 507 LFGLIPLDPTTIPV-FGHYLALGIWPIIMGITMWFQMKL-----NPTPPDPTQQMIFNWM 560
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
PL+ + P+GL +YW NN LS QQ ++ + G K
Sbjct: 561 PLIFTFMLAGFPAGLVIYWAWNNTLSVLQQSFIMRRNGVK 600
>gi|421563993|ref|ZP_16009804.1| inner membrane protein oxaA [Neisseria meningitidis NM2795]
gi|421908001|ref|ZP_16337862.1| Inner membrane protein oxaA [Neisseria meningitidis alpha704]
gi|393290897|emb|CCI73876.1| Inner membrane protein oxaA [Neisseria meningitidis alpha704]
gi|402339212|gb|EJU74429.1| inner membrane protein oxaA [Neisseria meningitidis NM2795]
Length = 545
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 101/214 (47%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI++LT+IVKA +PLT S MR+ AP+++AI+E+Y D+ Q +LYK
Sbjct: 354 WGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDRMAQQQAMMQLYK 413
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY AL ++ RQ
Sbjct: 414 DEKINPLGGCLPMLLQIPVFIGLYWALF---------------------ASVELRQA--- 449
Query: 241 ISWLFPFVDGHPPLGW----SDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P LGW S Y +LP+++ + + Q+ N P +
Sbjct: 450 -----------PWLGWITDLSRADPYYILPIIMAATMF-----AQTYLNPPPTDPMQAKM 493
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ P+GL LYW NNLL+ AQQ
Sbjct: 494 MKIMPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 527
>gi|161526323|ref|YP_001581335.1| putative inner membrane protein translocase component YidC
[Burkholderia multivorans ATCC 17616]
gi|189348962|ref|YP_001944590.1| putative inner membrane protein translocase component YidC
[Burkholderia multivorans ATCC 17616]
gi|254772760|sp|A9ACA0.1|YIDC_BURM1 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|160343752|gb|ABX16838.1| 60 kDa inner membrane insertion protein [Burkholderia multivorans
ATCC 17616]
gi|189332984|dbj|BAG42054.1| preprotein translocase YidC subunit [Burkholderia multivorans ATCC
17616]
Length = 553
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 107/221 (48%), Gaps = 37/221 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 365 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKNDPQKMNAALMELYK 424
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 425 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 459
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D S Y +LPVL+ VS Y +Q+S N P + F+
Sbjct: 460 APWILWIHD------LSQRDPYFILPVLMAVSMY-----VQTSLNPTPPDPVQAKMMKFM 508
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAK 340
P+ P+GL LY+ NN+LS AQQ ++ +K GG K
Sbjct: 509 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGVK 549
>gi|315644292|ref|ZP_07897462.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus vortex
V453]
gi|315280667|gb|EFU43956.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus vortex
V453]
Length = 296
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 34/215 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG +++++ +IV+ PLT KQV SS AM+++ P+++ I+E+Y E++Q+ET +L++
Sbjct: 69 YGLSVLVMVLIVRTLILPLTLKQVRSSKAMQAIQPEIQKIREKYKDQPEKVQMETMKLFQ 128
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+AGCLP + +P++I LY ++ + L F W+
Sbjct: 129 ENKVNPMAGCLPLIVQMPIFIALYHSIY--YNNLLRDHEFLWL----------------- 169
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
LG D +LPVL ++ Y+ K++ N P M Q +
Sbjct: 170 ------------QLGQPDKL--FILPVLAAITTYLQTKMMM-KMNPSPQMGMMQFMLFVY 214
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++I + PS L LYWF +NL + Q +L +
Sbjct: 215 PILIFVMSFQFPSALPLYWFYSNLYTIVQNYFLYR 249
>gi|51598696|ref|YP_072884.1| putative inner membrane protein translocase component YidC
[Borrelia garinii PBi]
gi|81691561|sp|Q661H9.1|YIDC_BORGA RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|51573267|gb|AAU07292.1| inner membrane protein [Borrelia garinii PBi]
Length = 544
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 118/235 (50%), Gaps = 24/235 (10%)
Query: 101 METVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAI 160
M+ V++V D + +G +II LT++V+ FPLT K ++ + L P++K +
Sbjct: 329 MQMVMQVFYDVIPN------WGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKEL 382
Query: 161 QERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF 220
Q ++ D +++ E RLYK G+NPL GC P + +P++ LY ++N+ L G
Sbjct: 383 QVKFKHDPKKLNEEMGRLYKEEGVNPLGGCFPVILQLPIFFALYSLVNNL----FLLRGA 438
Query: 221 FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII 280
+IP +I G F + W+D +LP +++ +Q S I
Sbjct: 439 SFIPGWIDDLSIGDSVYNFGYRLYF--------VSWTDI---RILPFIMMFTQLGST--I 485
Query: 281 QSSQNNDPNMKSSQALTNF-LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
SS + N+ + Q F +P+M + ++PSGL +YW T N+ + QQ +++
Sbjct: 486 VSSNLDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIK 540
>gi|304322173|ref|YP_003855816.1| 60 kDa inner membrane insertion protein [Parvularcula bermudensis
HTCC2503]
gi|303301075|gb|ADM10674.1| 60 kDa inner membrane insertion protein [Parvularcula bermudensis
HTCC2503]
Length = 589
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 113/221 (51%), Gaps = 16/221 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+LLT+++KA FPL +S M+ + P++ I+ERY D+ + Q E LYK
Sbjct: 360 WGVAILLLTLVIKAVLFPLANMSYKSMAGMKKVQPELMKIRERYTDDKTKQQQEMMALYK 419
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLA--GPTTIAARQNG 238
INP AGCLP LA +P++ LY+ L + L E F +IP L+ PT++
Sbjct: 420 KHKINPAAGCLPVLAQMPIFYALYKTLFVTIE--LRHEPFLYIPDLSEQDPTSV------ 471
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTN 298
+ L PF PL S +LP+L+ + ++ +K+ N P + + +
Sbjct: 472 FNLFGLLPFDPTTVPLIGS-FLGIGILPLLMGAAMFVQLKL-----NPPPPDPTQRMIFG 525
Query: 299 FLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGA 339
+PL+ + +GL LYWF N LS QQ + K GA
Sbjct: 526 LMPLIFMFIFAPFAAGLVLYWFWNTFLSVIQQYIIMKRQGA 566
>gi|241759451|ref|ZP_04757555.1| inner membrane protein, 60 kDa [Neisseria flavescens SK114]
gi|241320233|gb|EER56566.1| inner membrane protein, 60 kDa [Neisseria flavescens SK114]
Length = 548
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 104/215 (48%), Gaps = 46/215 (21%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII+LT+IVKA +PLT S MR+ AP+++AI+E+Y D+ Q +LYK
Sbjct: 357 WGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDRMVQQQAMMQLYK 416
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY AL ++ RQ
Sbjct: 417 DEKINPLGGCLPMLLQIPVFIGLYWALF---------------------ASVELRQ---- 451
Query: 241 ISWLFPFVDGHPPLGWSDTFA----YLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQA- 295
P LGW + + +LP+++ V+ + + N P+ QA
Sbjct: 452 ----------APWLGWITDLSRPDPFYILPLIMAVTMFAQTYL------NPPSTDPMQAK 495
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+ +PL+ P+GL LYW NNLL+ AQQ
Sbjct: 496 MMKIMPLVFSIMFFFFPAGLVLYWVVNNLLTIAQQ 530
>gi|220905229|ref|YP_002480541.1| YidC translocase/secretase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869528|gb|ACL49863.1| YidC translocase/secretase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 548
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 115/219 (52%), Gaps = 33/219 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLTV++KAA +PLT K S M+ L P + I+E++ ++E++ E LYK
Sbjct: 353 WGLAIILLTVLIKAAFWPLTAKSYASMEKMKKLQPHMMEIREKFKDNKEQMNKEVMALYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF--WIPSLAGPTTIAARQNG 238
G+NP +GC+P L +PV+ GLY+AL + L F ++P G
Sbjct: 413 TYGVNPASGCVPILIQLPVFFGLYQALLTSIE---LRHAPFITYLP-------------G 456
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTN 298
+ I WL P + PV++ ++ ++ ++ S DP + Q +
Sbjct: 457 TDILWLADLSTKDP---------LYITPVIMGLTMFLQQRM--SPPATDP---TQQKIMM 502
Query: 299 FLPLMIGYFALSVPSGLSLYWFTNNLLSTA-QQVWLQKF 336
FLPL+ L+ PSGL LYW NN+LS A QQ+ ++KF
Sbjct: 503 FLPLIFTALFLNFPSGLVLYWLVNNVLSIAQQQMMIRKF 541
>gi|317154269|ref|YP_004122317.1| YidC/Oxa1 family membrane protein insertase [Desulfovibrio
aespoeensis Aspo-2]
gi|316944520|gb|ADU63571.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio
aespoeensis Aspo-2]
Length = 554
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 107/211 (50%), Gaps = 28/211 (13%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG AIILLT+++K +PL+++ S M+ L P V+ ++E+Y D++R+ ET LYK
Sbjct: 358 YGIAIILLTIVIKLIFWPLSQRSYASMEQMKKLQPMVQKLREKYGDDKQRLNQETMALYK 417
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GCLP + IPV+ GLY+AL + L F A +
Sbjct: 418 TYKVNPMGGCLPMVVQIPVFFGLYKALLGAVE---LRHAPF-----------IANVPFTD 463
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+ WL P Y V P+++ + ++ K+ S+ DP + Q + +
Sbjct: 464 LPWLADLSAKDP---------YYVTPLIMGATMFLQQKMTPSA--GDP---TQQKIMMLM 509
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
P++ + L PSGL +YW NN+LS QQ+
Sbjct: 510 PVVFTFMFLQFPSGLVIYWLLNNVLSIGQQL 540
>gi|402851811|ref|ZP_10899939.1| Inner membrane protein translocase component YidC, long form
[Rhodovulum sp. PH10]
gi|402497919|gb|EJW09703.1| Inner membrane protein translocase component YidC, long form
[Rhodovulum sp. PH10]
Length = 614
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 126/251 (50%), Gaps = 23/251 (9%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W IT M V+ L + +G AI+L+TV++K FPL K S M+S
Sbjct: 366 WFYFITKPMFWVIDFL------FQWTHNFGIAILLVTVLIKGVFFPLANKSYASMAKMKS 419
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
PQ++ I+ER+ D+ + Q E LYK INP+AGC P L IPV+ LY+ L +
Sbjct: 420 FQPQMQQIKERFPDDKVKQQQELMDLYKREKINPIAGCWPVLIQIPVFFSLYKVLF-ITI 478
Query: 213 EGLLTEGFFWIPSLAG--PTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYL-VLPVLL 269
E F WI L+ PTT+ N G L PF P+ +F +L P+++
Sbjct: 479 EMRHAPFFGWIHDLSAPDPTTVF---NLFG---LLPFDPMMVPM--IGSFLHLGAWPLIM 530
Query: 270 VVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
V+ ++ +++ N P + + + ++P++ + + P+GL +YW NNLLS Q
Sbjct: 531 GVTMWVQMQL-----NPTPPDPTQKMIFTWMPVLFTFMLANFPAGLVIYWTWNNLLSVIQ 585
Query: 330 QVWLQKFGGAK 340
Q + + GAK
Sbjct: 586 QAVIMRKNGAK 596
>gi|118589754|ref|ZP_01547159.1| putative inner membrane protein translocase component YidC [Stappia
aggregata IAM 12614]
gi|118437840|gb|EAV44476.1| putative inner membrane protein translocase component YidC
[Labrenzia aggregata IAM 12614]
Length = 606
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 112/226 (49%), Gaps = 17/226 (7%)
Query: 115 LHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLE 174
H+ +G AI+++TVIVK FPL K S M+ + PQ+ I+E+Y+ D+++ Q
Sbjct: 376 FHLFGNFGVAILVVTVIVKLIFFPLANKSYVSMSKMKLVQPQMTEIREKYSDDRQKQQQA 435
Query: 175 TARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAA 234
LYK INPLAGCLP + IPV+ LY+ L V E F WI L+ P
Sbjct: 436 LMELYKKEKINPLAGCLPIVVQIPVFFSLYKVLY-VTIEMRHAPFFGWIQDLSAPDPTTL 494
Query: 235 RQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQ 294
LF + PP V P+++ ++ +I +K+ N P + Q
Sbjct: 495 FN-------LFGLIPWDPP----QMLMLGVWPLIMGITMFIQMKM-----NPAPPDPTQQ 538
Query: 295 ALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+ ++P++ + S P+GL +YW NN LS QQ + + GAK
Sbjct: 539 MIFTWMPVIFTFMLASFPAGLVIYWAWNNTLSVTQQYVIMRRQGAK 584
>gi|171316349|ref|ZP_02905569.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria
MEX-5]
gi|171098478|gb|EDT43280.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria
MEX-5]
Length = 554
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 37/221 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLTV++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 366 WGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 425
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 426 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 460
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D L D F +LPVL+ VS + +Q+S N P + F+
Sbjct: 461 APWILWIHD----LSQRDPF--FILPVLMAVSMF-----VQTSLNPTPPDPVQAKMMKFM 509
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAK 340
P+ P+GL LY+ NN+LS AQQ ++ +K GG K
Sbjct: 510 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGVK 550
>gi|409408120|ref|ZP_11256564.1| inner-membrane transmembrane protein [Herbaspirillum sp. GW103]
gi|386432576|gb|EIJ45403.1| inner-membrane transmembrane protein [Herbaspirillum sp. GW103]
Length = 566
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 111/211 (52%), Gaps = 27/211 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+ IILLTV++K FPL+ S M++++P+++AI+ER+ GD + + E LYK
Sbjct: 369 WGWTIILLTVLIKLVFFPLSAASYRSMAKMKAVSPKMQAIRERHKGDPQAMNREMMALYK 428
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRA-LSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
INPL GCLP + IPV+I LY L++V G G W+ L P R G+
Sbjct: 429 TEKINPLGGCLPIVIQIPVFISLYSVLLASVEMRGAPWLG--WVHDLTAPD----RLFGT 482
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
P+ + P+G +LP+++ S + +Q+ N P + F
Sbjct: 483 -----IPYFNM--PIG--------LLPIIMAASMF-----LQTRLNPTPPDPVQAKVMMF 522
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ + PSGL LYW TNN+LS AQQ
Sbjct: 523 MPLVFSFMFFFFPSGLVLYWVTNNILSIAQQ 553
>gi|23100949|ref|NP_694416.1| stage III sporulation protein J [Oceanobacillus iheyensis HTE831]
gi|38503017|sp|Q8EKU1.1|YIDC_OCEIH RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC; Flags:
Precursor
gi|22779184|dbj|BAC15450.1| stage III sporulation protein J [Oceanobacillus iheyensis HTE831]
Length = 252
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 114/229 (49%), Gaps = 43/229 (18%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERY----AGDQERIQLETA 176
YG AII++T+ V+ PL KQ++SS AM+ + P+++ IQ++Y A Q+++Q ET
Sbjct: 59 YGLAIIIVTLFVRLLLMPLNVKQIKSSKAMQEIQPKLQEIQKKYTSKDANTQQKLQQETM 118
Query: 177 RLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ 236
L++ G+NPLAGCLP L +P+++ +Y A+ + T F W
Sbjct: 119 ELFQKNGVNPLAGCLPILVQMPIFVAMYHAIMRTPEIS--THSFLW-------------- 162
Query: 237 NGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQS---SQNNDPNMK-S 292
F G P +LP+L + ++ K++ S S N++P MK
Sbjct: 163 ----------FQLGSPD---------YILPILTGLFTFLQQKLMMSTNTSMNSNPQMKLQ 203
Query: 293 SQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKD 341
Q + +P+MIG A P+ L+LYW T N+ Q + + K AK
Sbjct: 204 MQIMLYVMPIMIGVMAFFFPAALALYWVTGNIFMVFQTLLINKPMMAKK 252
>gi|410666405|ref|YP_006918776.1| membrane protein OxaA [Thermacetogenium phaeum DSM 12270]
gi|409104152|gb|AFV10277.1| membrane protein OxaA [Thermacetogenium phaeum DSM 12270]
Length = 229
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 112/229 (48%), Gaps = 43/229 (18%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YG AIIL T+ VK FPLT+ Q+ S AM+ L P++K IQERY E+ Q +LY
Sbjct: 27 SYGLAIILFTIAVKIVLFPLTRLQMNSMRAMQELQPKIKEIQERYKNKPEKAQQAVMQLY 86
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGL------LTE-GFFWIPSLAGPTTI 232
K G+NP++GCLP L +P+ L+ +L D L LT+ GF WI +L P I
Sbjct: 87 KEKGVNPMSGCLPLLIQMPIIFALFSSLRLFFDPKLHPPYVDLTKAGFLWIENLGQPDPI 146
Query: 233 AARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYIS--VKIIQSSQNNDPNM 290
+LP+L VV + + +S DP
Sbjct: 147 -------------------------------ILPLLTVVVTFAQQFFTSMTASGKIDPTQ 175
Query: 291 KSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGA 339
++ + +PL IG+ A ++P+GL+LYW +L S + + +++ G
Sbjct: 176 RT---MLIIMPLFIGWIARTLPAGLTLYWVVFSLFSAVETLVIRRMSGV 221
>gi|172062138|ref|YP_001809790.1| putative inner membrane protein translocase component YidC
[Burkholderia ambifaria MC40-6]
gi|254772757|sp|B1YQJ7.1|YIDC_BURA4 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|171994655|gb|ACB65574.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria
MC40-6]
Length = 554
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 37/221 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLTV++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 366 WGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 425
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 426 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 460
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D L D F +LPVL+ VS + +Q+S N P + F+
Sbjct: 461 APWILWIHD----LSQRDPF--FILPVLMAVSMF-----VQTSLNPTPPDPVQAKMMKFM 509
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAK 340
P+ P+GL LY+ NN+LS AQQ ++ +K GG K
Sbjct: 510 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGVK 550
>gi|407001193|gb|EKE18259.1| hypothetical protein ACD_10C00065G0001 [uncultured bacterium]
Length = 551
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 100/210 (47%), Gaps = 36/210 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII+LTVI+K FPL+ +S M+ L P++ ++ER+ D++R+ E ++Y+
Sbjct: 359 WGWAIIVLTVILKGIFFPLSAASYKSMAKMKLLTPRLTQLKERFGDDKQRLNQEMMKMYQ 418
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPL GCLP L IPV+I LY L A E WI LA P
Sbjct: 419 TEKVNPLGGCLPILVQIPVFIALYWVLLG-AVEMRDAPWTLWIHDLASPD---------- 467
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
Y +LPV+++ S +I K+ N P + +
Sbjct: 468 --------------------PYFILPVIMMASMFIQTKL-----NPTPPDPIQAKVMMAM 502
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
PL+ G P+GL LYW NN+LS AQQ
Sbjct: 503 PLIFGVMFFWFPAGLVLYWVVNNILSIAQQ 532
>gi|392381243|ref|YP_005030440.1| inner membrane insertion protein [Azospirillum brasilense Sp245]
gi|356876208|emb|CCC96971.1| inner membrane insertion protein [Azospirillum brasilense Sp245]
Length = 579
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 110/220 (50%), Gaps = 17/220 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI++ TVIVKAA FPL K + M+ L P++ +++R+ D+ R+ E LYK
Sbjct: 375 FGIAILVFTVIVKAAFFPLANKSYHAMAKMKKLQPKMMELRDRFGDDKVRLNQEMMALYK 434
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
++P++GCLP L IPV+ LY+ L V E F WI L+ P + +
Sbjct: 435 REKVSPVSGCLPILIQIPVFFALYKVLF-VTIEMRHAPFFGWIHDLSAP-------DPTT 486
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I LF + PP + P+++ ++ Y K+ N P Q + FL
Sbjct: 487 IFNLFGLIPWQPP----HILMLGLWPIIMGITMYFQQKL-----NPAPPDPVQQKVFQFL 537
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
P++ + S P+GL +YW NN LS AQQ + + G K
Sbjct: 538 PIIFTFMLASFPAGLVIYWAWNNTLSIAQQWIIMRQDGVK 577
>gi|410679216|ref|YP_006931618.1| inner membrane protein translocase component YidC [Borrelia afzelii
HLJ01]
gi|408536604|gb|AFU74735.1| putative inner membrane protein translocase component YidC
[Borrelia afzelii HLJ01]
Length = 544
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 118/235 (50%), Gaps = 24/235 (10%)
Query: 101 METVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAI 160
M+ V++V D + +G +II LT++V+ FPLT K ++ + L P++K +
Sbjct: 329 MQMVMQVFYDVIPN------WGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKEL 382
Query: 161 QERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF 220
Q ++ D +++ E RLYK G+NPL GC P + +P++ LY ++N+ L G
Sbjct: 383 QVKFKHDPKKLNEEMGRLYKEEGVNPLGGCFPIILQLPIFFALYSLVNNL----FLLRGA 438
Query: 221 FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII 280
+IP +I G F + W+D +LP +++ +Q S I
Sbjct: 439 NFIPGWIDDLSIGDSVYHFGYKLYF--------VSWTDI---RILPFIMMFTQLGST--I 485
Query: 281 QSSQNNDPNMKSSQALTNF-LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
SS + N+ + Q F +P+M + ++PSGL +YW T N+ + QQ +++
Sbjct: 486 VSSNIDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIK 540
>gi|111115269|ref|YP_709887.1| putative inner membrane protein translocase component YidC
[Borrelia afzelii PKo]
gi|216263402|ref|ZP_03435397.1| inner membrane protein OxaA [Borrelia afzelii ACA-1]
gi|384206934|ref|YP_005592655.1| 60Kd inner membrane family protein [Borrelia afzelii PKo]
gi|122956367|sp|Q0SN67.1|YIDC_BORAP RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|110890543|gb|ABH01711.1| inner membrane protein [Borrelia afzelii PKo]
gi|215980246|gb|EEC21067.1| inner membrane protein OxaA [Borrelia afzelii ACA-1]
gi|342856817|gb|AEL69665.1| 60Kd inner membrane family protein [Borrelia afzelii PKo]
Length = 544
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 118/235 (50%), Gaps = 24/235 (10%)
Query: 101 METVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAI 160
M+ V++V D + +G +II LT++V+ FPLT K ++ + L P++K +
Sbjct: 329 MQMVMQVFYDVIPN------WGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKEL 382
Query: 161 QERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF 220
Q ++ D +++ E RLYK G+NPL GC P + +P++ LY ++N+ L G
Sbjct: 383 QVKFKHDPKKLNEEMGRLYKEEGVNPLGGCFPIILQLPIFFALYSLVNNL----FLLRGA 438
Query: 221 FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII 280
+IP +I G F + W+D +LP +++ +Q S I
Sbjct: 439 NFIPGWIDDLSIGDSVYHFGYKLYF--------VSWTDI---RILPFIMMFTQLGST--I 485
Query: 281 QSSQNNDPNMKSSQALTNF-LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
SS + N+ + Q F +P+M + ++PSGL +YW T N+ + QQ +++
Sbjct: 486 VSSNIDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIK 540
>gi|399058336|ref|ZP_10744512.1| membrane protein insertase, YidC/Oxa1 family, partial
[Novosphingobium sp. AP12]
gi|398040994|gb|EJL34079.1| membrane protein insertase, YidC/Oxa1 family, partial
[Novosphingobium sp. AP12]
Length = 420
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 115/213 (53%), Gaps = 17/213 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLT IV+ FP+ ++ S AMR++ P++KA+QERY D+++ Q E LYK
Sbjct: 195 FGVAIILLTAIVRGIMFPVAQRGFASMAAMRAIQPKMKALQERYKDDKQKQQQEIMALYK 254
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G+NP+AGCLP IPV+ LY+ L +A E WI L+ P + +
Sbjct: 255 KEGVNPMAGCLPMFLQIPVFFALYKTLI-LAIEMRHQPFVLWIKDLSAP-------DPAH 306
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I LF +D PP A +L +LL V+ ++ K+ + DP + Q + +
Sbjct: 307 ILNLFGLLDFQPP----AFLAIGLLALLLGVTMFLQFKL--NPAQMDP---AQQQVFMIM 357
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P + + SGL +YW T+NLL+ AQQ +L
Sbjct: 358 PWFMMFVMAPFASGLLVYWITSNLLTIAQQKYL 390
>gi|421870340|ref|ZP_16301973.1| Inner membrane protein translocase component YidC, long form
[Burkholderia cenocepacia H111]
gi|358069688|emb|CCE52851.1| Inner membrane protein translocase component YidC, long form
[Burkholderia cenocepacia H111]
Length = 544
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 37/221 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLTV++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 356 WGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 415
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 416 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 450
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D L D F +LPVL+ VS + +Q+S N P + F+
Sbjct: 451 APWILWIHD----LSQRDPF--FILPVLMAVSMF-----VQTSLNPTPPDPVQAKMMKFM 499
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAK 340
P+ P+GL LY+ NN+LS AQQ ++ +K GG K
Sbjct: 500 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGVK 540
>gi|170697750|ref|ZP_02888837.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria
IOP40-10]
gi|170137365|gb|EDT05606.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria
IOP40-10]
Length = 553
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 37/221 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLTV++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 365 WGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 424
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 425 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 459
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D L D F +LPVL+ VS + +Q+S N P + F+
Sbjct: 460 APWILWIHD----LSQRDPF--FILPVLMAVSMF-----VQTSLNPTPPDPVQAKMMKFM 508
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAK 340
P+ P+GL LY+ NN+LS AQQ ++ +K GG K
Sbjct: 509 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGVK 549
>gi|399889384|ref|ZP_10775261.1| inner membrane protein translocase component YidC [Clostridium
arbusti SL206]
Length = 263
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 29/210 (13%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
++G +II+LT+I++ PL KQ++SS+ M L P++K +Q RY D +++Q ET +LY
Sbjct: 32 SFGLSIIVLTIIIRVILLPLNIKQIKSSLMMSKLGPEIKKLQARYKSDPQKLQQETMKLY 91
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
K G NPL GCLP + P+ I LY + +G+ GF WI L+ +++
Sbjct: 92 KEKGANPLGGCLPLIIQYPILIALYYVFYTLEIKGI---GFLWIHDLSKSASLS-----D 143
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
SW+ P + G + Y S ++ SS + K + +
Sbjct: 144 WTSWILPVISG--------------------ATTYFS-GMLMSSTVDKAQAKQTSTMNIV 182
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
+ +++ Y +L + L LYW T N++ Q
Sbjct: 183 MSIVLFYMSLRFNAALVLYWVTGNIVQILQ 212
>gi|415944379|ref|ZP_11556211.1| Inner membrane protein oxaA, partial [Herbaspirillum frisingense
GSF30]
gi|407758530|gb|EKF68345.1| Inner membrane protein oxaA, partial [Herbaspirillum frisingense
GSF30]
Length = 476
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 111/211 (52%), Gaps = 27/211 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+ IILLTV++K FPL+ S M++++P++++I+ER+ GD + + E LYK
Sbjct: 279 WGWTIILLTVLIKLVFFPLSAASYRSMAKMKAVSPKMQSIRERHKGDPQAMNREMMALYK 338
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRA-LSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
INPL GCLP + IPV+I LY L++V G G W+ L P R G+
Sbjct: 339 TEKINPLGGCLPIVIQIPVFIALYSVLLASVEMRGAPWLG--WVHDLTAPD----RLFGT 392
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
P+ + P+G +LP+++ S ++ K+ N P + F
Sbjct: 393 -----IPYFNM--PIG--------LLPIIMAASMFLQTKL-----NPTPPDPVQAKVMMF 432
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ + PSGL LYW TNN+LS AQQ
Sbjct: 433 MPLVFSFMFFFFPSGLVLYWVTNNILSIAQQ 463
>gi|374290987|ref|YP_005038022.1| Inner membrane insertion protein [Azospirillum lipoferum 4B]
gi|357422926|emb|CBS85768.1| Inner membrane insertion protein [Azospirillum lipoferum 4B]
Length = 575
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 115/223 (51%), Gaps = 23/223 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+LLTV VKA FPL K ++ M++L P+++ ++E+++ DQ R+ E +YK
Sbjct: 372 FGLAILLLTVCVKAVFFPLANKSYQAMSKMKALQPKMQELREKFSDDQARMNQELMAMYK 431
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
++P++GCLP L IPV+ LY+ L V E F WI L+ P + +
Sbjct: 432 REKVSPVSGCLPILIQIPVFFALYKVLF-VTIEMRHAPFFGWIHDLSSP-------DPTT 483
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQALT 297
I LF + PP A L L P+++ V+ + +Q N P Q +
Sbjct: 484 IFNLFGLIPWDPP-------AMLHLGAWPLIMGVTMW-----LQQKMNPAPPDPIQQKVF 531
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
FLP++ + P+GL +YW NNLLS AQQ + + G K
Sbjct: 532 QFLPIVFTFMLAGFPAGLVIYWAWNNLLSVAQQWTIMRRMGVK 574
>gi|307943178|ref|ZP_07658523.1| inner membrane protein OxaA [Roseibium sp. TrichSKD4]
gi|307773974|gb|EFO33190.1| inner membrane protein OxaA [Roseibium sp. TrichSKD4]
Length = 603
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 107/210 (50%), Gaps = 17/210 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+L+TV +K FPL K S M+ + PQ++ I++RY D+ + Q LYK
Sbjct: 379 FGVAILLVTVAIKLVFFPLANKSYVSMSKMKLVQPQMQEIRDRYGDDKAKQQQALMELYK 438
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPLAGCLP L IPV+ LY+ L V E F WI L+ P + +
Sbjct: 439 KEKINPLAGCLPILIQIPVFFALYKVLF-VTIEMRHAPFFGWIQDLSAP-------DPTT 490
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I LF + PP + P+L+ ++ ++ +K+ N P + Q + ++
Sbjct: 491 IFNLFGMIPWDPP----QLLTVGIWPLLMGITMFVQMKM-----NPAPPDPTQQMIFTWM 541
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
P++ + S P+GL +YW NN LS AQQ
Sbjct: 542 PIIFTFMLASFPAGLVIYWAWNNFLSIAQQ 571
>gi|107024094|ref|YP_622421.1| inner membrane protein translocase component YidC [Burkholderia
cenocepacia AU 1054]
gi|116691180|ref|YP_836803.1| putative inner membrane protein translocase component YidC
[Burkholderia cenocepacia HI2424]
gi|123071851|sp|Q1BSF7.1|YIDC_BURCA RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|166975851|sp|A0KBN3.1|YIDC_BURCH RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|105894283|gb|ABF77448.1| protein translocase subunit yidC [Burkholderia cenocepacia AU 1054]
gi|116649269|gb|ABK09910.1| protein translocase subunit yidC [Burkholderia cenocepacia HI2424]
Length = 552
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 37/221 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLTV++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 364 WGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 423
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 424 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D L D F +LPVL+ VS + +Q+S N P + F+
Sbjct: 459 APWILWIHD----LSQRDPF--FILPVLMAVSMF-----VQTSLNPTPPDPVQAKMMKFM 507
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAK 340
P+ P+GL LY+ NN+LS AQQ ++ +K GG K
Sbjct: 508 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGVK 548
>gi|206558829|ref|YP_002229589.1| putative inner membrane protein translocase component YidC
[Burkholderia cenocepacia J2315]
gi|444364035|ref|ZP_21164388.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
cenocepacia BC7]
gi|444367842|ref|ZP_21167748.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
cenocepacia K56-2Valvano]
gi|254772759|sp|B4E7D5.1|YIDC_BURCJ RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|198034866|emb|CAR50738.1| putative membrane protein [Burkholderia cenocepacia J2315]
gi|443593645|gb|ELT62362.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
cenocepacia BC7]
gi|443602087|gb|ELT70191.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
cenocepacia K56-2Valvano]
Length = 552
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 37/221 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLTV++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 364 WGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 423
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 424 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D L D F +LPVL+ VS + +Q+S N P + F+
Sbjct: 459 APWILWIHD----LSQRDPF--FILPVLMAVSMF-----VQTSLNPTPPDPVQAKMMKFM 507
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAK 340
P+ P+GL LY+ NN+LS AQQ ++ +K GG K
Sbjct: 508 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGVK 548
>gi|170734513|ref|YP_001766460.1| putative inner membrane protein translocase component YidC
[Burkholderia cenocepacia MC0-3]
gi|254772758|sp|B1K0Y4.1|YIDC_BURCC RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|169817755|gb|ACA92338.1| 60 kDa inner membrane insertion protein [Burkholderia cenocepacia
MC0-3]
Length = 553
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 37/221 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLTV++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 365 WGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 424
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 425 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 459
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D L D F +LPVL+ VS + +Q+S N P + F+
Sbjct: 460 APWILWIHD----LSQRDPF--FILPVLMAVSMF-----VQTSLNPTPPDPVQAKMMKFM 508
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAK 340
P+ P+GL LY+ NN+LS AQQ ++ +K GG K
Sbjct: 509 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGVK 549
>gi|318058974|ref|ZP_07977697.1| putative inner membrane protein translocase component YidC
[Streptomyces sp. SA3_actG]
gi|318077328|ref|ZP_07984660.1| putative inner membrane protein translocase component YidC
[Streptomyces sp. SA3_actF]
Length = 447
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 125/257 (48%), Gaps = 24/257 (9%)
Query: 91 SDWLSGITNVMETVLKVLKDGMSTLHVP---YAYGFAIILLTVIVKAATFPLTKKQVESS 147
+ W S IT + V+ + P +A+G +I+ L +I++ PL KQ++++
Sbjct: 5 ASWFSFITTPVSWVIVQFHTLYGWIFGPDTGWAWGLSIVSLVIIIRICLIPLFVKQIKAT 64
Query: 148 MAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRAL 207
AM++L P++K IQERY D++R E +LYK +G NPL+ CLP L P + LY L
Sbjct: 65 RAMQTLQPEMKRIQERYKSDKQRQSEEMMKLYKESGTNPLSSCLPILVQSPFFFALYHVL 124
Query: 208 SNVADE---GLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLV 264
+A G++ + A + + G F G LG T +V
Sbjct: 125 DGIASNKKIGVINDKLL---------DSAQQAHIFGAPLAAKFTSGADSLGADLTTVRIV 175
Query: 265 LPVLLVV---SQYISVKIIQSSQNND-----PNMKSSQALTNFLPLMIGYFALSVPSGLS 316
++V+ SQ+ + + + ++N D P M+ + L P+M F ++ P G+
Sbjct: 176 TACMIVMMSASQFFTQRQLM-TKNVDTSVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVL 234
Query: 317 LYWFTNNLLSTAQQVWL 333
LYW T N+ + QQ+++
Sbjct: 235 LYWLTTNVWTMGQQMFV 251
>gi|95929982|ref|ZP_01312722.1| 60 kDa inner membrane insertion protein [Desulfuromonas acetoxidans
DSM 684]
gi|95133951|gb|EAT15610.1| 60 kDa inner membrane insertion protein [Desulfuromonas acetoxidans
DSM 684]
Length = 527
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 36/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YGF+IILLTVI+K +PLT+K S AM+ + P++K ++E+Y D+E + + LY+
Sbjct: 346 YGFSIILLTVIIKMLFWPLTQKSYVSMKAMQKIQPEMKKLREKYGNDRESLNRKMMELYR 405
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPL GCLP L IPV+ LY+ L TI R
Sbjct: 406 EHRVNPLGGCLPMLVQIPVFFALYKVLLG---------------------TIELRHA--- 441
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
PF+ L D Y + P+++ ++ +I K+ ++ DP M++ L +
Sbjct: 442 -----PFIFWITDLSVKD--PYYITPLVMGLTMFIQQKLTPNTM--DP-MQAKMMLA--M 489
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++ + L+ P+GL +YW NNLL+ QQ + K
Sbjct: 490 PVVFTFLFLNFPAGLVVYWLVNNLLTIFQQYLIYK 524
>gi|298290371|ref|YP_003692310.1| membrane protein insertase, YidC/Oxa1 family domain containing
protein [Starkeya novella DSM 506]
gi|296926882|gb|ADH87691.1| membrane protein insertase, YidC/Oxa1 family domain containing
protein [Starkeya novella DSM 506]
Length = 609
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 128/251 (50%), Gaps = 23/251 (9%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W IT + V+ + G+ +G AI+++TV++K FPL K S M++
Sbjct: 359 WFYFITKPLFLVIDWIYKGVGN------FGVAILIVTVMLKIVFFPLANKSYASMAKMKA 412
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
+ P++ A++ERY D+ ++Q E +YK INP+AGCLP + IPV+ LY+ L V
Sbjct: 413 VQPEITALRERYGDDRVKLQQEMMEIYKKEKINPVAGCLPIVIQIPVFFALYKVLF-VTI 471
Query: 213 EGLLTEGFFWIPSLAG--PTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYL-VLPVLL 269
E F WI L+ PTTI N G L P+ G P+ F L V P+++
Sbjct: 472 EMRHAPFFGWIKDLSAPDPTTIF---NLFG---LIPWDPGQVPV--IGHFLLLGVWPIIM 523
Query: 270 VVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
++ + +K+ N P + +A+ +++PL+ + S SGL +YW NN LS Q
Sbjct: 524 GITMWAQMKL-----NPAPPDPTQKAIFDWMPLIFTFMLGSFASGLVIYWAWNNTLSVIQ 578
Query: 330 QVWLQKFGGAK 340
Q + + G K
Sbjct: 579 QSIIMRRNGVK 589
>gi|92119160|ref|YP_578889.1| inner membrane protein translocase component YidC [Nitrobacter
hamburgensis X14]
gi|122416784|sp|Q1QH68.1|YIDC_NITHX RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|91802054|gb|ABE64429.1| protein translocase subunit yidC [Nitrobacter hamburgensis X14]
Length = 609
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 121/248 (48%), Gaps = 17/248 (6%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W IT M L HV +G AI+ +TV++KA FPL + S M++
Sbjct: 357 WFYFITKPMFLALDFF------FHVFGNFGIAILFVTVLIKAIFFPLANRSYASMAKMKA 410
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
+ PQ+ A++ER+ D+ ++Q E +YK INP++GCLP + IPV+ LY+ L V
Sbjct: 411 VQPQIAALKERFPDDKMKLQQEMMEIYKKEKINPISGCLPMVLQIPVFFSLYKVLF-VTI 469
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E F WI L+ P + + L P+ PL A P+++ ++
Sbjct: 470 EMRHAPFFAWIKDLSAPDP----THIFNLFGLLPYDPSAVPL-LGPYLAIGAWPIIMGIT 524
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
+ +K+ N P + + + +++P++ + + P+GL +YW NN LS QQ +
Sbjct: 525 MWFQMKL-----NPTPPDPTQKLIFDWMPVIFTFMLAAFPAGLVIYWAWNNTLSVIQQSY 579
Query: 333 LQKFGGAK 340
+ + G K
Sbjct: 580 IMRRNGVK 587
>gi|300313620|ref|YP_003777712.1| inner-membrane transmembrane protein [Herbaspirillum seropedicae
SmR1]
gi|300076405|gb|ADJ65804.1| inner-membrane transmembrane protein [Herbaspirillum seropedicae
SmR1]
Length = 542
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 112/214 (52%), Gaps = 28/214 (13%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+ IILLTV++K FPL+ S M++++P+++AI+ER+ GD + + E LYK
Sbjct: 345 WGWTIILLTVLIKLIFFPLSAASYRSMAKMKAVSPKMQAIRERHKGDPQAMNREMMTLYK 404
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRA-LSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
INPL GCLP IPV+I LY L++V G G W+ L P R G+
Sbjct: 405 TEKINPLGGCLPIAIQIPVFIALYSVLLASVEMRGAPWLG--WVHDLTAPD----RLFGT 458
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
P+ + P+G +LP+++ S ++ K+ N P + F
Sbjct: 459 -----IPYFNM--PIG--------LLPIIMAASMFLQTKL-----NPTPPDPVQAKVMMF 498
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
+PL+ + PSGL LYW TNN+LS AQQ W+
Sbjct: 499 MPLVFSFMFFFFPSGLVLYWVTNNILSIAQQ-WV 531
>gi|344924338|ref|ZP_08777799.1| preprotein translocase subunit YidC [Candidatus Odyssella
thessalonicensis L13]
Length = 560
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 124/247 (50%), Gaps = 29/247 (11%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W +T + VL+ L + + G AI+LLTVI K A FPL K S M++
Sbjct: 331 WFYFLTKPLFYVLEYLNKILGNI------GLAILLLTVIFKVAMFPLANKSYRSMSRMKA 384
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+++ +++RY D+ ++ E LYK INP+AGCLP L PV+ LY+ L V
Sbjct: 385 LQPKMEVLKQRYGADKMKLNQELMELYKKEKINPMAGCLPILIQAPVFFCLYKVLF-VTL 443
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVL---PVLL 269
E + WI L+ P + + + LF + PP ++L++ P+++
Sbjct: 444 EMRHAPFYGWIHDLSAP-------DPTSVFNLFGLLPFTPP-------SFLMIGAWPLIM 489
Query: 270 VVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
V+ + ++ S Q DP + + +P+M+ + P+GL +YW NN+LS AQ
Sbjct: 490 GVTMLLQQRL--SPQPADPAQAKAMMI---MPVMMTVLLANFPAGLVIYWAWNNVLSIAQ 544
Query: 330 QVWLQKF 336
Q W+ +
Sbjct: 545 QWWIMRL 551
>gi|343499273|ref|ZP_08737256.1| membrane protein insertase [Vibrio tubiashii ATCC 19109]
gi|418479448|ref|ZP_13048530.1| membrane protein insertase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
gi|342823148|gb|EGU57804.1| membrane protein insertase [Vibrio tubiashii ATCC 19109]
gi|384572959|gb|EIF03463.1| membrane protein insertase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
Length = 539
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 139/298 (46%), Gaps = 53/298 (17%)
Query: 44 VAKFGLR-PDPNSADG----VKELLGVAERLLFTLADAAVSSSDAVTTTKQNSDWLSGIT 98
+ G+R P+ ADG K L V +L +A+ A + V + WL I
Sbjct: 279 LGDIGVRMPNKTIADGDSANFKATLWVGPKLQDQMAEVAPNLDLVV-----DYGWLWFIA 333
Query: 99 NVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVK 158
+ ++L ++ +S +G AII LT IV+ A +PLTK Q S MR L P+++
Sbjct: 334 KPLHSLLSFIQGFVSN------WGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQ 387
Query: 159 AIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTE 218
A++ER D++R+ E LYK +NPL GCLP + +P++I LY AL + L
Sbjct: 388 AMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVE--LRHS 445
Query: 219 GFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISV 277
FF WI L+ Y +LP+L+ S ++ +
Sbjct: 446 PFFGWIHDLSAQD------------------------------PYYILPLLMGASMFL-I 474
Query: 278 KIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+ + + DP Q + F+P+M +F L PSGL LYW +N+++ QQ + K
Sbjct: 475 QKMSPTTVTDP---MQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQTLIYK 529
>gi|417949541|ref|ZP_12592675.1| membrane protein insertase [Vibrio splendidus ATCC 33789]
gi|342808050|gb|EGU43220.1| membrane protein insertase [Vibrio splendidus ATCC 33789]
Length = 540
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 123/261 (47%), Gaps = 49/261 (18%)
Query: 82 DAVTTTKQNSD------WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAA 135
D + T N D WL I + T+L ++ +S +G AII+LT IV+ A
Sbjct: 312 DQMAATAPNLDLVVDYGWLWFIAKPLHTLLSFIQGFVSN------WGVAIIILTFIVRGA 365
Query: 136 TFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLA 195
+PLTK Q S MR L P++ A++ER D++R+ E LYK +NPL GCLP L
Sbjct: 366 MYPLTKAQYTSMAKMRMLQPKLTAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILL 425
Query: 196 TIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPL 254
+P++I LY AL + L FF WI L+
Sbjct: 426 QMPIFISLYWALMESVE--LRHSPFFGWITDLSAQD------------------------ 459
Query: 255 GWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSG 314
Y +LP+L+ S ++ ++ + + DP Q + F+P+M +F L PSG
Sbjct: 460 ------PYYILPLLMGASMFL-IQKMSPTTVTDP---MQQKIMTFMPVMFTFFFLFFPSG 509
Query: 315 LSLYWFTNNLLSTAQQVWLQK 335
L LYW +N+++ QQ + +
Sbjct: 510 LVLYWLVSNIVTLIQQTLIYR 530
>gi|440703099|ref|ZP_20884050.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces
turgidiscabies Car8]
gi|440275401|gb|ELP63828.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces
turgidiscabies Car8]
Length = 427
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 120/229 (52%), Gaps = 24/229 (10%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L ++++ PL KQ++S+ AM++L P++K IQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKSTRAMQTLQPEMKKIQERYKNDKQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADE---GLLTEGFFWIPSLAGPTTIAAR 235
YK G NPL+ CLP LA P + LY L+ +A G++ + A +
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLNGIATGDTIGVINDSLL---------ASARK 146
Query: 236 QNGSGISWLFPFVDGHP---PLGWSDTFAYLVLPVLLVV---SQYISVKIIQSSQNND-- 287
+ G F DG LG + T +V +++V+ SQ+ + + + ++N D
Sbjct: 147 AHIFGAPLAAKFRDGSSTVDALGATVTDVRVVTAIMIVLMSASQFYTQRQLM-TKNVDTT 205
Query: 288 ---PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P+M +F ++ P G+ +YW T N+ + QQ+++
Sbjct: 206 VKTPFMQQQKMLMYVFPVMFAFFGINFPVGVLVYWLTTNVWTMGQQMYV 254
>gi|383483421|ref|YP_005392334.1| membrane protein insertase [Rickettsia parkeri str. Portsmouth]
gi|378935775|gb|AFC74275.1| membrane protein insertase [Rickettsia parkeri str. Portsmouth]
Length = 560
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 119/222 (53%), Gaps = 27/222 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L K S M++L P++ I+ Y+GD+ R+ E LYK
Sbjct: 361 FGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSGDKARLNQEIMALYK 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
+NP+AGCLP L IPV+ +Y+ L V E + WI L+ PTTI N
Sbjct: 421 KEKVNPVAGCLPILVQIPVFFSIYKVLY-VTIEMRQAPFYGWIKDLSASDPTTIF---NL 476
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G L PF PP ++L++ P+L+ ++ ++ K+ S + DP M++
Sbjct: 477 FG---LLPF---SPP-------SFLMIGAWPILMAITMFLQQKM--SPEPADP-MQAQ-- 518
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
+ F+PL+ + S P GL +YW NN+LS QQ ++ KF
Sbjct: 519 VMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQQYYINKFN 560
>gi|416980467|ref|ZP_11937983.1| membrane protein insertase [Burkholderia sp. TJI49]
gi|325519717|gb|EGC99037.1| membrane protein insertase [Burkholderia sp. TJI49]
Length = 553
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 37/221 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLTV++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 365 WGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 424
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 425 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 459
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D L D F +LPVL+ VS + +Q+S N P + F+
Sbjct: 460 APWILWIHD----LSQRDPF--FILPVLMAVSMF-----VQTSLNPTPPDPVQAKMMKFM 508
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAK 340
P+ P+GL LY+ NN+LS AQQ ++ +K GG K
Sbjct: 509 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGVK 549
>gi|257461375|ref|ZP_05626471.1| inner membrane protein, 60 kDa [Campylobacter gracilis RM3268]
gi|257441098|gb|EEV16245.1| inner membrane protein, 60 kDa [Campylobacter gracilis RM3268]
Length = 547
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 121/262 (46%), Gaps = 45/262 (17%)
Query: 76 AAVSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAA 135
A +SS + T W + I M L L + +G++I++LT+I++
Sbjct: 314 ATLSSINPALTHIIEYGWFTFIARPMFKFLNWLHGYIGN------WGWSIVVLTLIIRLI 367
Query: 136 TFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLA 195
FPL+ K + S ++ LAP++K +QE+Y D++++Q+ LYK G NP+ GCLP L
Sbjct: 368 LFPLSYKGMLSMNKLKDLAPKMKELQEKYKDDKQKLQMHMMDLYKKNGANPMGGCLPILL 427
Query: 196 TIPVWIGLYRALSNVADEGLLTEGFFWIP--SLAGPTTIAARQNGSGISWLFPFVDGHPP 253
IPV+ +YR L N A E E WI SL P
Sbjct: 428 QIPVFFAIYRVLLN-AIELKGAEWALWIHDLSLKDP------------------------ 462
Query: 254 LGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPS 313
Y +LP+ + + ++ KI ++ DP + + FLPL+ F + P+
Sbjct: 463 --------YYILPITMGILMFLQQKITPTT-FTDP---MQEKMMKFLPLIFTVFFVMFPA 510
Query: 314 GLSLYWFTNNLLSTAQQVWLQK 335
GL+LYW NN S QQ + K
Sbjct: 511 GLTLYWTVNNFCSIIQQYVINK 532
>gi|300705597|ref|YP_003747200.1| cytoplasmic insertase, essential for proper integration of ATPase
into the membrane [Ralstonia solanacearum CFBP2957]
gi|299073261|emb|CBJ44620.1| cytoplasmic insertase, essential for proper integration of ATPase
into the membrane [Ralstonia solanacearum CFBP2957]
Length = 554
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 99/214 (46%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++I+ LTV++K FPL+ S M+ L P++ AI+ER+ GD +++ E LY+
Sbjct: 364 WGWSIVALTVLIKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHKGDPQKMNQEMMTLYR 423
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPL GCLP L IPV++ LY AL + +
Sbjct: 424 TEKVNPLGGCLPILIQIPVFMALYWALLSSVE---------------------------- 455
Query: 241 ISWLFPFVDGHPPLGWSDTFA----YLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
+ G P LGW A + +LP+L+ VS ++ K+ N P +
Sbjct: 456 -------MRGAPWLGWVHDLASPDPFYILPILMAVSMFVQTKL-----NPTPPDPVQAKM 503
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
F+PL P+GL LYW NN LS AQQ
Sbjct: 504 MMFMPLAFSVMFFFFPAGLVLYWVVNNCLSIAQQ 537
>gi|390454465|ref|ZP_10239993.1| membrane protein oxaA 1 [Paenibacillus peoriae KCTC 3763]
Length = 289
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 34/215 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG A+++L +IV+ PLT KQV SS AM+++ PQ+K IQ +Y ER+Q ET +L++
Sbjct: 70 YGLAVLILVIIVRTIILPLTLKQVRSSKAMQAIQPQLKEIQAKYKDTPERVQQETMKLFQ 129
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+AGCLP + +P++I LY A+ + L F W+ L P +
Sbjct: 130 ENKVNPMAGCLPLVVQMPIFIALYNAI--YYNSALRDHDFLWL-QLGKPDHL-------- 178
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+LP+L ++ ++ ++ N P Q L
Sbjct: 179 ----------------------FILPILAAITTFVQTWMMM-KLNPTPQQGPMQFLLYVY 215
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++I + + + PS L LYWF +N+ + Q +L +
Sbjct: 216 PVLILFMSYNFPSALPLYWFYSNIYTIIQNYFLYR 250
>gi|302520509|ref|ZP_07272851.1| membrane protein oxaA [Streptomyces sp. SPB78]
gi|302429404|gb|EFL01220.1| membrane protein oxaA [Streptomyces sp. SPB78]
Length = 447
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 125/257 (48%), Gaps = 24/257 (9%)
Query: 91 SDWLSGITNVMETVLKVLKDGMSTLHVP---YAYGFAIILLTVIVKAATFPLTKKQVESS 147
+ W S IT + V+ + P +A+G +I+ L +I++ PL KQ++++
Sbjct: 5 ASWFSFITTPVSWVIVQFHTLYGWIFGPDTGWAWGLSIVSLVIIIRICLIPLFVKQIKAT 64
Query: 148 MAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRAL 207
AM++L P++K IQERY D++R E +LYK +G NPL+ CLP L P + LY L
Sbjct: 65 RAMQTLQPEMKRIQERYKSDKQRQSEEMMKLYKESGTNPLSSCLPILVQSPFFFALYHVL 124
Query: 208 SNVADE---GLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLV 264
+A G++ + A + + G F G LG T +V
Sbjct: 125 DGIASNKKIGVINDKLL---------DSAQQAHIFGAPLAAKFTSGADSLGADLTTVRIV 175
Query: 265 LPVLLVV---SQYISVKIIQSSQNND-----PNMKSSQALTNFLPLMIGYFALSVPSGLS 316
++V+ SQ+ + + + ++N D P M+ + L P+M F ++ P G+
Sbjct: 176 TACMIVMMSASQFFTQRQLM-TKNVDTSVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVL 234
Query: 317 LYWFTNNLLSTAQQVWL 333
LYW T N+ + QQ+++
Sbjct: 235 LYWLTTNVWTMGQQMFV 251
>gi|115353266|ref|YP_775105.1| inner membrane protein translocase component YidC [Burkholderia
ambifaria AMMD]
gi|122321904|sp|Q0BAQ2.1|YIDC_BURCM RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|115283254|gb|ABI88771.1| protein translocase subunit yidC [Burkholderia ambifaria AMMD]
Length = 554
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 37/221 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLTV++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 366 WGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNSALMELYK 425
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 426 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 460
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D L D F +LPVL+ VS + +Q+S N P + F+
Sbjct: 461 APWILWIHD----LSQRDPF--FILPVLMAVSMF-----VQTSLNPTPPDPVQAKMMKFM 509
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAK 340
P+ P+GL LY+ NN+LS AQQ ++ +K GG K
Sbjct: 510 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGVK 550
>gi|402565069|ref|YP_006614414.1| 60 kDa inner membrane insertion protein [Burkholderia cepacia GG4]
gi|402246266|gb|AFQ46720.1| 60 kDa inner membrane insertion protein [Burkholderia cepacia GG4]
Length = 553
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 37/221 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLTV++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 365 WGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 424
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 425 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 459
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D L D F +LPVL+ VS + +Q+S N P + F+
Sbjct: 460 APWILWIHD----LSQRDPF--FILPVLMAVSMF-----VQTSLNPTPPDPVQAKMMKFM 508
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAK 340
P+ P+GL LY+ NN+LS AQQ ++ +K GG K
Sbjct: 509 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGVK 549
>gi|85374954|ref|YP_459016.1| preprotein translocase subunit YidC [Erythrobacter litoralis
HTCC2594]
gi|84788037|gb|ABC64219.1| preprotein translocase subunit [Erythrobacter litoralis HTCC2594]
Length = 581
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 117/214 (54%), Gaps = 20/214 (9%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLTVI++ FP+ +KQ S AM+++ P++KAIQE+Y D+++ Q E LYK
Sbjct: 364 FGVAIILLTVIIRGLLFPIAQKQFGSMAAMKAVQPKMKAIQEKYKDDKQKQQQEIMALYK 423
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPLAGCLP L IP++ LY+ L +A E WI L+ P A N G
Sbjct: 424 EEKVNPLAGCLPLLIQIPIFFALYKVLI-LAIEMRHQPFALWIEDLSAPDP-AHIFNLFG 481
Query: 241 ISWLFPF-VDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
L PF V G +G L VLL V+ +++ Q + DP + + N
Sbjct: 482 ---LLPFEVPGLIAIG--------PLAVLLGVTMWLT---FQMNPVTDPIQRQ---IFNI 524
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
+P ++ + +GL LYW T+N+L+ AQQ +L
Sbjct: 525 MPWVLMFIMAPFAAGLLLYWNTSNVLTLAQQRYL 558
>gi|114327390|ref|YP_744547.1| hypothetical protein GbCGDNIH1_0726 [Granulibacter bethesdensis
CGDNIH1]
gi|122327634|sp|Q0BU78.1|YIDC_GRABC RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|114315564|gb|ABI61624.1| 60 kDa inner membrane protein YIDC [Granulibacter bethesdensis
CGDNIH1]
Length = 578
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 112/219 (51%), Gaps = 22/219 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI++ TV+VKAA +PL K S MR LAP++++++ERY D R+Q E +LYK
Sbjct: 366 FGVAILIFTVLVKAAFYPLASKSYRSMSKMRLLAPKIQSLRERYKDDPTRMQQEVMQLYK 425
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
G NP +GCLP L P++ LY+ + V E F WI L+ PT N
Sbjct: 426 AEGANPASGCLPMLLQFPIFFSLYKVIF-VTIEMRHAPFFGWIHDLSAVDPT------NL 478
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQA-L 296
+ L PF H F +L + P+++ + Y+ K+ N P QA +
Sbjct: 479 FNLFGLLPFDPTH-----ISPFLHLGIWPLIMGGTMYLQQKM------NPPMPDPVQARM 527
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
F+P++ + P GL +YW NNLLS QQ +Q+
Sbjct: 528 FQFMPIIFTFMLARFPVGLVIYWSWNNLLSIGQQWLIQR 566
>gi|421888618|ref|ZP_16319703.1| fragment of cytoplasmic insertase, essential for proper integration
of ATPase into the membrane (part 2) [Ralstonia
solanacearum K60-1]
gi|378966050|emb|CCF96451.1| fragment of cytoplasmic insertase, essential for proper integration
of ATPase into the membrane (part 2) [Ralstonia
solanacearum K60-1]
Length = 464
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 99/214 (46%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++I+ LTV++K FPL+ S M+ L P++ AI+ER+ GD +++ E LY+
Sbjct: 274 WGWSIVALTVLIKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHKGDPQKMNQEMMTLYR 333
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPL GCLP L IPV++ LY AL + +
Sbjct: 334 TEKVNPLGGCLPILIQIPVFMALYWALLSSVE---------------------------- 365
Query: 241 ISWLFPFVDGHPPLGWSDTFA----YLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
+ G P LGW A + +LP+L+ VS ++ K+ N P +
Sbjct: 366 -------MRGAPWLGWVHDLASPDPFYILPILMAVSMFVQTKL-----NPTPPDPVQAKM 413
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
F+PL P+GL LYW NN LS AQQ
Sbjct: 414 MMFMPLAFSVMFFFFPAGLVLYWVVNNCLSIAQQ 447
>gi|390569552|ref|ZP_10249837.1| membrane protein insertase [Burkholderia terrae BS001]
gi|389938412|gb|EIN00256.1| membrane protein insertase [Burkholderia terrae BS001]
Length = 550
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 38/221 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+ + P+++A++ER+ GD +++ LYK
Sbjct: 363 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKGDPQKMNAALMELYK 422
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRAL-SNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+NP GCLP + IPV+I LY L S+V G WI L+ +Q+
Sbjct: 423 TEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRG--APWILWIHDLS-------QQD-- 471
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
Y +LPVL+ VS +I K+ N P + F
Sbjct: 472 ---------------------PYFILPVLMAVSMFIQTKL-----NPTPPDPVQAKMMMF 505
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+P+ P+GL LY+ NN+LS AQQ ++ + G +
Sbjct: 506 MPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMGQR 546
>gi|345016445|ref|YP_004818799.1| YidC/Oxa1 family membrane protein insertase [Streptomyces
violaceusniger Tu 4113]
gi|344042794|gb|AEM88519.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces
violaceusniger Tu 4113]
Length = 379
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 124/229 (54%), Gaps = 24/229 (10%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L V+++ PL KQ++S+ M++L P++KAIQERY D++R E +L
Sbjct: 33 WAWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQALQPKMKAIQERYKSDKQRQSEEMMKL 92
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADE---GLLTEGFFWIPSLAGPTTIAAR 235
YK G NPL+ CLP LA P +I LY+ L+++A+ G++ + + A
Sbjct: 93 YKETGTNPLSSCLPILAQSPFFISLYQVLNHIANNKTVGVIDQNLL-------DSARNAH 145
Query: 236 QNGSGISWLFPFVDGHPP---LGWSDTFAYLV---LPVLLVVSQYISVKIIQSSQNND-- 287
G+ +S F+D LG S T +V + +L+ SQ+ + + + ++N D
Sbjct: 146 IFGAPLS--VKFMDSASKVESLGASLTDVRIVTITMIILMSASQFFTQRQLM-TKNVDLT 202
Query: 288 ---PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P+M F ++ P G+ +YW T N+ + QQ+++
Sbjct: 203 VKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTLGQQMFV 251
>gi|347761814|ref|YP_004869375.1| translocase inner membrane component [Gluconacetobacter xylinus
NBRC 3288]
gi|347580784|dbj|BAK85005.1| translocase inner membrane component [Gluconacetobacter xylinus
NBRC 3288]
Length = 586
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 122/245 (49%), Gaps = 23/245 (9%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + +T + TVL L + +G A++ T++VKA FPL KQ S MR
Sbjct: 340 WFAFLTRPIFTVLDWLNTMLGN------FGLALMAFTLLVKALFFPLATKQFHSMGKMRQ 393
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P++KA++ERY DQ + + LYK G+NP +GCLP L IPV+ LY+ L V
Sbjct: 394 LQPKIKALRERYKDDQMALNQQMIGLYKQEGVNPASGCLPMLLQIPVFWCLYKDLY-VTI 452
Query: 213 EGLLTEGFFWIPSLAG--PTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLV 270
E F WI L+ PT + LF + +P + S + P+
Sbjct: 453 EMRHAPFFGWIHDLSAFDPTNLFT---------LFGLIPWNPAVI-SPMLQLGLWPIAFG 502
Query: 271 VSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
++ + ++ + + DP + Q + F+P++ +F PSGL +Y+ NNLL+ AQQ
Sbjct: 503 LTMFAQMR-LNPTPTADP---AQQKMFQFMPIIFTFFMARQPSGLVIYYCWNNLLTMAQQ 558
Query: 331 VWLQK 335
+Q+
Sbjct: 559 TLIQR 563
>gi|170743186|ref|YP_001771841.1| 60 kDa inner membrane insertion protein [Methylobacterium sp. 4-46]
gi|254773005|sp|B0UHI1.1|YIDC_METS4 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|168197460|gb|ACA19407.1| 60 kDa inner membrane insertion protein [Methylobacterium sp. 4-46]
Length = 624
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 115/220 (52%), Gaps = 17/220 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++T+I+K P+ + S M+++ P++ AI+ERYA D+ + Q LYK
Sbjct: 400 FGVSILVVTLILKLFFLPIANRSYVSMAKMKAVQPEMTAIRERYADDKVKQQQAMMELYK 459
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INP+AGC P L IPV+ LY+ L V E F WI LA P + +
Sbjct: 460 KEKINPVAGCWPVLIQIPVFFSLYKVLF-VTIEMRHAPFFGWIRDLAAP-------DPTS 511
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I LF + PP D V P+++ ++ ++ +K+ + P+ +Q T F+
Sbjct: 512 IVNLFGLLPFTPP----DLLHLGVWPIVMGITMFLQMKMNPAP----PDPVQAQVFT-FM 562
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
P++ + S P+GL +YW NNLLS QQ W+ + G K
Sbjct: 563 PIIFTFMLGSFPAGLVIYWAWNNLLSILQQYWIMRRNGVK 602
>gi|420253418|ref|ZP_14756472.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia sp.
BT03]
gi|398052220|gb|EJL44504.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia sp.
BT03]
Length = 550
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 38/221 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+ + P+++A++ER+ GD +++ LYK
Sbjct: 363 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKGDPQKMNAALMELYK 422
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRAL-SNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+NP GCLP + IPV+I LY L S+V G WI L+ +Q+
Sbjct: 423 TEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRG--APWILWIHDLS-------QQD-- 471
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
Y +LPVL+ VS +I K+ N P + F
Sbjct: 472 ---------------------PYFILPVLMAVSMFIQTKL-----NPTPPDPVQAKMMMF 505
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+P+ P+GL LY+ NN+LS AQQ ++ + G +
Sbjct: 506 MPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMGQR 546
>gi|298246125|ref|ZP_06969931.1| membrane protein insertase, YidC/Oxa1 family [Ktedonobacter
racemifer DSM 44963]
gi|297553606|gb|EFH87471.1| membrane protein insertase, YidC/Oxa1 family [Ktedonobacter
racemifer DSM 44963]
Length = 353
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 120/231 (51%), Gaps = 22/231 (9%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII+LTV++K FPLT +Q+ SS AM+ L P++ I++++ GD + L +LYK
Sbjct: 31 FGLAIIVLTVLIKLLLFPLTLQQLRSSKAMQVLQPKIAEIKKKHPGDVQSQSLAMNQLYK 90
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLT------EGFFWIPSLAGPTTIAA 234
G+ PLAGCLP + +PV GLY A+ + + LT E + ++ G I
Sbjct: 91 EYGVKPLAGCLPMVIQLPVLYGLYFAVGGILRDQHLTIETLNRELYPFVAPFKGVPDINL 150
Query: 235 RQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQ--------SSQNN 286
R W F F++ H + +LP+L ++ ++S+++ Q
Sbjct: 151 R-------W-FEFLNPHWFISLGQPDPTHILPILAGLATFVSLRMAQPRNAQAKKDKSTP 202
Query: 287 DPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
DP ++S Q + +P + + + P+GL+LYW +++ QQ ++ +G
Sbjct: 203 DPMVQSMQTMQYVMPFVTIFIGWTFPAGLALYWTVSSIFQAVQQYFVTGWG 253
>gi|260774544|ref|ZP_05883457.1| OxaI/YidC membrane insertion protein [Vibrio metschnikovii CIP
69.14]
gi|260610450|gb|EEX35656.1| OxaI/YidC membrane insertion protein [Vibrio metschnikovii CIP
69.14]
Length = 540
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 114/244 (46%), Gaps = 43/244 (17%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
WL I + T+L ++ + +G AII LT IV+ A +PLTK Q S MR
Sbjct: 329 WLWFIAKPLHTLLSFIQSFVGN------WGVAIICLTFIVRGAMYPLTKAQYTSMAKMRM 382
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+++A++ER D++R+ E LYK +NPL GCLP L +P++I LY AL +
Sbjct: 383 LQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVE 442
Query: 213 EGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVV 271
L FF WI L+ Y +LP+L+
Sbjct: 443 --LRHSPFFGWIHDLSAQD------------------------------PYYILPLLMGA 470
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
S + +IQ N Q + F+P+M +F L PSGL LYW +N+++ QQ
Sbjct: 471 SMF----LIQKMSPNTITDPMQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQT 526
Query: 332 WLQK 335
+ +
Sbjct: 527 LIYR 530
>gi|78067989|ref|YP_370758.1| inner membrane protein translocase component YidC [Burkholderia sp.
383]
gi|123567331|sp|Q39BQ2.1|YIDC_BURS3 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|77968734|gb|ABB10114.1| protein translocase subunit yidC [Burkholderia sp. 383]
Length = 555
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 37/221 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++I+LLT+++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 367 WGWSIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNSALMELYK 426
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 427 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 461
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D L D F +LPVL+ VS Y +Q+S N P + F+
Sbjct: 462 APWVLWIHD----LSQRDPF--FILPVLMAVSMY-----VQTSLNPTPPDPVQAKMMKFM 510
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAK 340
P+ P+GL LY+ NN+LS AQQ ++ +K GGAK
Sbjct: 511 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGAK 551
>gi|406992171|gb|EKE11571.1| hypothetical protein ACD_15C00059G0009 [uncultured bacterium]
Length = 257
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 123/238 (51%), Gaps = 24/238 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII T++VK PL+KKQ+ES M+ L P++K IQ +Y D+E+ LYK
Sbjct: 27 FGVAIIFSTIVVKFFLIPLSKKQIESQKKMQELQPKIKEIQIKYKKDKEKQSRAMMELYK 86
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+ NP +GCLP + + I +YR L N++ GL+ +A P I N
Sbjct: 87 ESKTNPFSGCLPMIVQLIFLIAIYRVLFNISTAGLVVNQSDLYSFVANPGQI----NKMF 142
Query: 241 ISWLFPFVDGHPPLGWSD----TFAYLVLPVLLVVSQYISVKI------IQSSQNNDPNM 290
+S VD + +S+ + +++L VL +Q+I K+ I++++N +P+
Sbjct: 143 LS----LVDLAAAIDFSNITIQSMPHIILVVLAAAAQFIQTKMLMNKSPIKTNKNEEPDF 198
Query: 291 KSSQALTN---FL-PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMK 344
S+ +T FL PL+ + + P+GL+LYW + L QQV+++ D +K
Sbjct: 199 --SEIMTKQMLFLGPLLTLFIGIKFPAGLALYWLVSTLFMVIQQVYMEVRAKKTDSLK 254
>gi|421862981|ref|ZP_16294683.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379512|emb|CBX21878.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 299
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 102/214 (47%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII+LT+IVKA +PLT S MR+ AP+++AI+E+Y D+ Q +LYK
Sbjct: 108 WGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDRMAQQQAMMQLYK 167
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY AL ++ RQ
Sbjct: 168 DEKINPLGGCLPMLLQIPVFIGLYWALF---------------------ASVELRQA--- 203
Query: 241 ISWLFPFVDGHPPLGW----SDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P LGW S + Y +LP+++ + + Q+ N P +
Sbjct: 204 -----------PWLGWITDLSRSDPYYILPIIMAATMF-----AQTYLNPPPTDPMQAKM 247
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ P+GL LYW NNLL+ AQQ
Sbjct: 248 MKIMPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 281
>gi|115522671|ref|YP_779582.1| putative inner membrane protein translocase component YidC
[Rhodopseudomonas palustris BisA53]
gi|115516618|gb|ABJ04602.1| protein translocase subunit yidC [Rhodopseudomonas palustris
BisA53]
Length = 626
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 127/254 (50%), Gaps = 29/254 (11%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W IT M L H+ +G +I+ +TVI+K PL K S M++
Sbjct: 378 WFYFITKPMFVALDFF------YHLVGNFGLSILFVTVIIKLLFLPLANKSYASMAKMKA 431
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
+ PQ++A+++R+ D+ + Q E +Y+ INP+AGCLP L IPV+ LY+ L V
Sbjct: 432 IQPQLQALKDRHPDDKAKQQQEMMEIYRKEKINPVAGCLPVLLQIPVFFSLYKVLF-VTI 490
Query: 213 EGLLTEGFFWIPSL--AGPTTIAARQNGSGISWLFPFVDGH-PPLGWSDTFAYLVL---P 266
E + WI L A PT I N G L P+ P LG+ YLVL P
Sbjct: 491 EMRHAPFYGWIHDLSAADPTNIF---NLFG---LIPYDPTQIPVLGY-----YLVLGIWP 539
Query: 267 VLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLS 326
+++ ++ ++ +K+ N P + Q + ++PL+ + S P+GL +YW NNLLS
Sbjct: 540 IIMGITMWVQMKL-----NPAPPDPTQQMIFAWMPLLFTFMLASFPAGLVIYWAWNNLLS 594
Query: 327 TAQQVWLQKFGGAK 340
QQ ++ + G K
Sbjct: 595 VIQQGYIMRKNGVK 608
>gi|379713097|ref|YP_005301435.1| membrane protein insertase [Rickettsia massiliae str. AZT80]
gi|376333743|gb|AFB30975.1| membrane protein insertase [Rickettsia massiliae str. AZT80]
Length = 560
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 119/222 (53%), Gaps = 27/222 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L K S M++L P++ I+ Y+ D+ R+ E LYK
Sbjct: 361 FGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEIMALYK 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
+NP+AGCLP L IPV+ +Y+ L V E T + WI L+ PTTI N
Sbjct: 421 KEKVNPVAGCLPILVQIPVFFSIYKVLY-VTIEMRQTPFYGWIKDLSAPDPTTIF---NL 476
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G L PF PP ++L++ P+L+ ++ ++ K+ S + DP M++
Sbjct: 477 FG---LLPF---SPP-------SFLMIGAWPILMAITMFLQQKM--SPEPADP-MQAQ-- 518
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
+ F+PL+ + S P GL +YW NN+LS QQ ++ KF
Sbjct: 519 VMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQQYYINKFN 560
>gi|157964113|ref|YP_001498937.1| putative inner membrane protein translocase component YidC
[Rickettsia massiliae MTU5]
gi|166977409|sp|A8F0F4.1|YIDC_RICM5 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|157843889|gb|ABV84390.1| Preprotein translocase subunit YidC [Rickettsia massiliae MTU5]
Length = 560
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 119/222 (53%), Gaps = 27/222 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L K S M++L P++ I+ Y+ D+ R+ E LYK
Sbjct: 361 FGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEIMALYK 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
+NP+AGCLP L IPV+ +Y+ L V E T + WI L+ PTTI N
Sbjct: 421 KEKVNPVAGCLPILVQIPVFFSIYKVLY-VTIEMRQTPFYGWIKDLSAPDPTTIF---NL 476
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G L PF PP ++L++ P+L+ ++ ++ K+ S + DP M++
Sbjct: 477 FG---LLPF---SPP-------SFLMIGAWPILMAITMFLQQKM--SPEPADP-MQAQ-- 518
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
+ F+PL+ + S P GL +YW NN+LS QQ ++ KF
Sbjct: 519 VMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQQYYINKFN 560
>gi|374587084|ref|ZP_09660176.1| Membrane protein oxaA [Leptonema illini DSM 21528]
gi|373875945|gb|EHQ07939.1| Membrane protein oxaA [Leptonema illini DSM 21528]
Length = 630
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 112/221 (50%), Gaps = 23/221 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG+AII++ V K T+PL + Q ++ M +L P++ I E+Y D Q + +YK
Sbjct: 433 YGYAIIIIAVGWKLVTYPLNQMQAKTMKKMNALKPEMDVINEKYKDDPNERQKKIMEVYK 492
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INP GCLP L IP++I LY A + + E + W+ L+ P T+
Sbjct: 493 KHKINPAKGCLPILIQIPIFIALYSAFTE-SIELWHSPFILWMHDLSEPDTVYTLN---- 547
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
F + G F + +LP+++VVSQ+ K+ ++ +DP K L +
Sbjct: 548 ----FWIIQG---------FTFNILPLIMVVSQFAQQKL--TTVASDPQQK---MLMYMM 589
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKD 341
P ++ +F S+PSG++LYW N++S Q+ +F +D
Sbjct: 590 PFIMIFFFWSMPSGVTLYWTVQNIISVLWQLAANRFAKVED 630
>gi|83313455|ref|YP_423719.1| putative inner membrane protein translocase component YidC
[Magnetospirillum magneticum AMB-1]
gi|82948296|dbj|BAE53160.1| Preprotein translocase subunit YidC [Magnetospirillum magneticum
AMB-1]
Length = 579
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 115/238 (48%), Gaps = 23/238 (9%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W +T +L++L + + G AI+ LTVI+K A FPL K + M+
Sbjct: 355 WFYFLTKPFFYLLQMLHSALGNM------GLAILALTVILKLAMFPLANKSYVAMGKMKK 408
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+V+ +Q RYA D+ R+Q E LYK +NP++GCLP + IPV+ LY+ L V
Sbjct: 409 LQPKVQELQARYADDKMRLQQEMMALYKTEKVNPVSGCLPIMVQIPVFFALYKVLF-VTI 467
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E + WI L+ Q+ + I LF + PP F V P+++ V+
Sbjct: 468 EMRHAPFYGWISDLSA-------QDPTNIFTLFGMIPWTPP----SMFHLGVWPLIMGVT 516
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
++ K+ N P + FLP++ + + SGL +YW +N LS QQ
Sbjct: 517 MFLQQKL-----NPQPTDPVQAKMMQFLPIIFTFLLANFASGLVIYWAWSNTLSILQQ 569
>gi|91202840|emb|CAJ72479.1| similar to inner membrane protein YidC [Candidatus Kuenenia
stuttgartiensis]
Length = 563
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 129/240 (53%), Gaps = 23/240 (9%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
WL+ I+ ++ L + + + YG +II+LT+I+KA FPLT+K S M+
Sbjct: 336 WLNVISKLLLGFLNAVHNVIPN------YGISIIVLTIIIKALLFPLTRKSQVSMFRMQQ 389
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P + ++E+Y ++++I E L+K G+NP++GCLP + +PV+ L+R L ++
Sbjct: 390 LQPLINQLKEKYKNNKQKIGQEQVLLFKKYGVNPMSGCLPMILQLPVFFALFRTL-QLSF 448
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E FWI L+ P T+ PF P LG +T +LP+++ +
Sbjct: 449 EMRQAPFVFWINDLSMPDTLM----------YLPFTI--PFLG--NTLN--ILPIIMTGA 492
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ +K+ S DP ++ Q + +F+P+M + +PSGL+LYW T+ + S + ++
Sbjct: 493 SFVQMKLTPKSPATDPQAQAQQKMMSFMPIMFAFILYKMPSGLTLYWTTSTIFSIVESLF 552
>gi|255657635|ref|ZP_05403044.1| putative sporulation membrane protein [Clostridium difficile
QCD-23m63]
gi|296452684|ref|ZP_06894375.1| ParB/SpoJ family partitioning protein [Clostridium difficile NAP08]
gi|296880064|ref|ZP_06904033.1| ParB/SpoJ family partitioning protein [Clostridium difficile NAP07]
gi|296258466|gb|EFH05370.1| ParB/SpoJ family partitioning protein [Clostridium difficile NAP08]
gi|296428931|gb|EFH14809.1| ParB/SpoJ family partitioning protein [Clostridium difficile NAP07]
Length = 235
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 121/272 (44%), Gaps = 50/272 (18%)
Query: 97 ITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQ 156
I N + +LKV+ + ++ YG +IIL T++VK PLT KQ +S+ AM+ + P+
Sbjct: 4 IGNFLGLILKVIFEFVNH------YGISIILFTILVKIILLPLTIKQTKSTKAMQDIQPR 57
Query: 157 VKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLL 216
+K IQE+Y E+ E +LY A INPL+GCLP L P+ IGL+ L G+
Sbjct: 58 IKEIQEKYKNKPEKQNEEIVKLYGEAKINPLSGCLPLLIQFPILIGLFSVLREPVAHGVF 117
Query: 217 TE---------GFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPV 267
GF WI SL P I A +G+
Sbjct: 118 ANKAAFLAADNGFLWIKSLTSPDYILAVFSGA---------------------------- 149
Query: 268 LLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLST 327
S Y+ K++ +MK +T + M Y+ P+GL+LYW +NL S
Sbjct: 150 ----SAYVMQKVMTPKDQLQGSMK---VMTYVMAGMSFYWGFIFPAGLTLYWTVSNLFSI 202
Query: 328 AQQVWLQKFGGAKDPMKQFSDIIKDERLDINK 359
AQ + AK + + +++ INK
Sbjct: 203 AQYYLIMNPLKAKLAANSKEEKVNEKKPKINK 234
>gi|23015970|ref|ZP_00055732.1| COG0706: Preprotein translocase subunit YidC [Magnetospirillum
magnetotacticum MS-1]
Length = 578
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 114/238 (47%), Gaps = 23/238 (9%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W +T +L++L + + G AI+ LTVI+K A FPL K + M+
Sbjct: 354 WFYFLTKPFFYLLQMLHSALGNM------GLAILALTVILKLAMFPLANKSYVAMGKMKK 407
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+V+ +Q RYA D+ R+Q E LYK +NP++GCLP + IPV+ LY+ L V
Sbjct: 408 LQPKVQELQARYADDKMRLQQEMMALYKAEKVNPVSGCLPIMVQIPVFFALYKVLF-VTI 466
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E + WI L+ Q+ + I LF + PP V P+++ ++
Sbjct: 467 EMRHAPFYGWISDLSA-------QDPTNIFTLFGLIPWTPP----HIMHLGVWPLIMGIT 515
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
Y+ K+ N P + FLPL+ + + SGL +YW +N LS QQ
Sbjct: 516 MYLQQKL-----NPQPTDPVQAKMMQFLPLIFTFLLANFASGLVIYWAWSNTLSILQQ 568
>gi|397688935|ref|YP_006526254.1| membrane protein insertase [Pseudomonas stutzeri DSM 10701]
gi|395810491|gb|AFN79896.1| membrane protein insertase [Pseudomonas stutzeri DSM 10701]
Length = 560
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 110/215 (51%), Gaps = 36/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++II+LT+I+K A FPL+ +S MR+++P+++A++E++ D++++ LYK
Sbjct: 373 WGWSIIVLTIIIKLAFFPLSAASYKSMARMRAVSPKMQALKEQFGDDRQKMSQAMMELYK 432
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L +PV++ LY L ++ RQ
Sbjct: 433 KEKINPLGGCLPILVQMPVFLALYWVLLE---------------------SVEMRQA--- 468
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+F D L D F +LP+++ V+ +I Q N P + L
Sbjct: 469 -PWMFWITD----LSIKDPF--FILPIIMGVTMFI-----QQQLNPTPPDPMQAKVMKLL 516
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++ +F L P+GL LYW NN+LS AQQ ++ +
Sbjct: 517 PIIFTFFFLWFPAGLVLYWVVNNVLSIAQQWYITR 551
>gi|312113264|ref|YP_004010860.1| YidC/Oxa1 family membrane protein insertase [Rhodomicrobium
vannielii ATCC 17100]
gi|311218393|gb|ADP69761.1| membrane protein insertase, YidC/Oxa1 family [Rhodomicrobium
vannielii ATCC 17100]
Length = 711
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 137/295 (46%), Gaps = 33/295 (11%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W +T + +L L LHV +G AI+L TV+VK FPL K + ++
Sbjct: 365 WFPFLTQPLYFLLNWL-----YLHV-GNFGIAILLTTVLVKVLFFPLANKSYSAMNKLKM 418
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P++K IQER+ D++R Q LYK +NP AGCLP L IPV+ LY+ L V+
Sbjct: 419 LQPEMKKIQERFKDDKQRQQHAMMTLYKKEKVNPAAGCLPILVQIPVFFALYKVLL-VSI 477
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVV 271
E + WI L+ P + + I LF + PP F L LP+++
Sbjct: 478 EMRHAPFYGWIHDLSAP-------DPTNIFTLFGLIPWTPP-----HFMMLGALPLIMGC 525
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
S ++ +++ N P Q + ++P++ + +GL LYW NN+L+ AQQ
Sbjct: 526 SMWLQMRL-----NPTPPDPIQQKIFAWMPVLFTFMLAPFQAGLILYWTWNNILTFAQQA 580
Query: 332 WLQKFGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGE 386
+ K +Q ++ E++ + KS A K T E RPG+
Sbjct: 581 LIMK--------RQDKNMNLLEQIGLKKSNGAAKHRSHAHDVAHKPTAEPVRPGK 627
>gi|72163513|ref|YP_291170.1| hypothetical protein Tfu_3114 [Thermobifida fusca YX]
gi|71917245|gb|AAZ57147.1| putative membrane protein [Thermobifida fusca YX]
Length = 308
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 146/300 (48%), Gaps = 32/300 (10%)
Query: 92 DWLSGITNVMETVLKVLKDGMSTLHVP---YAYGFAIILLTVIVKAATFPLTKKQVESSM 148
DWL N++ VL + G+S P A+G +I+LLT++V+ PL KQ+ +
Sbjct: 3 DWL---YNIVGQVLVWIHSGLSIFLDPDSGLAWGLSIVLLTILVRVLMIPLFVKQMNTQR 59
Query: 149 AMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALS 208
++ L P++ ++ERY D++R+Q E ++Y+ +G NPL GCLP L +PV+ L+ L
Sbjct: 60 KLQELQPKLLKVRERYKNDKQRLQQEQIKIYQESGTNPLMGCLPLLLQMPVFFALFNVLR 119
Query: 209 NVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLF-PFVDGHPPLGWSDTFAYLVLPV 267
+A EG GF LA + +A G+ I+ F D G A +++ V
Sbjct: 120 QIA-EGEAKFGF--TQELAN-SAQSALIFGAPIAAHFTSSADELAAFGADPIMAKVIIAV 175
Query: 268 ---------LLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLY 318
L + Q +S + Q ++P M SQ + ++ G F L++P G+ +Y
Sbjct: 176 ACVIMGTTTFLTMRQSMSRTLKQPGMEDNP-MVQSQKIMMYIAPAFGLFGLAMPVGVLIY 234
Query: 319 WFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKD--ERLDINKSVPGLSSTKKEARQAEK 376
W T+NL + QQ +L ++F + D E+ S G + K +Q+EK
Sbjct: 235 WVTSNLWTMGQQHFL---------YRKFPPVASDGGEKNKAGVSATGKPGSTKRGQQSEK 285
>gi|219685168|ref|ZP_03539988.1| inner membrane protein OxaA [Borrelia garinii Far04]
gi|219673264|gb|EED30283.1| inner membrane protein OxaA [Borrelia garinii Far04]
Length = 544
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 110/215 (51%), Gaps = 18/215 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +II LT++V+ FPLT K ++ + L P++K +Q ++ D +++ E RLYK
Sbjct: 343 WGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKFKHDPKKLNEEMGRLYK 402
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G+NPL GC P + +P++ LY ++N+ L G +IP +I G
Sbjct: 403 EEGVNPLGGCFPVILQLPIFFALYSLVNNL----FLLRGASFIPGWIDDLSIGDSVYHFG 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF- 299
F + W+D +LP +++ +Q S I SS + N+ + Q F
Sbjct: 459 YKLYF--------VSWTDI---RILPFIMMFTQLGST--IISSNLDLKNLGAQQKFLYFG 505
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
+P+M + ++PSGL +YW T N+ + QQ +++
Sbjct: 506 MPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIK 540
>gi|85717142|ref|ZP_01048101.1| putative inner membrane protein translocase component YidC
[Nitrobacter sp. Nb-311A]
gi|85696033|gb|EAQ33932.1| putative inner membrane protein translocase component YidC
[Nitrobacter sp. Nb-311A]
Length = 614
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 121/248 (48%), Gaps = 17/248 (6%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W IT M L HV +G AI+++TV++K FPL + S M++
Sbjct: 360 WFYFITKPMFLALDFF------FHVFGNFGVAILVVTVLIKLVFFPLANRSYASMAKMKA 413
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
+ PQ+ A++E+Y D+ ++Q E +YK INP++GCLP L IPV+ LY+ L V
Sbjct: 414 VQPQITALKEQYPDDRMKLQQEMMEIYKKEKINPISGCLPMLLQIPVFFSLYKVLF-VTI 472
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E F WI L+ P + + L P+ PL A P+++ ++
Sbjct: 473 EMRHAPFFAWIKDLSAPDP----THIFNLFGLLPYDPSVVPL-LGPYLAIGAWPIIMGIT 527
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
+ +K+ N P + + + +++P++ + + P+GL +YW NN LS QQ +
Sbjct: 528 MWFQMKL-----NPTPPDPTQKIIFDWMPVIFTFMLAAFPAGLVIYWAWNNTLSVIQQSY 582
Query: 333 LQKFGGAK 340
+ + G K
Sbjct: 583 IMRRNGVK 590
>gi|323493773|ref|ZP_08098891.1| membrane protein insertase [Vibrio brasiliensis LMG 20546]
gi|323311907|gb|EGA65053.1| membrane protein insertase [Vibrio brasiliensis LMG 20546]
Length = 539
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 142/298 (47%), Gaps = 53/298 (17%)
Query: 44 VAKFGLR-PDPNSADG----VKELLGVAERLLFTLADAAVSSSDAVTTTKQNSDWLSGIT 98
+ G+R P+ ADG +K L V +L +A+ A + V + WL I
Sbjct: 279 LGDIGVRMPNKTIADGDSANLKATLWVGPKLQDQMAEVAPNLDLVV-----DYGWLWFIA 333
Query: 99 NVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVK 158
+ T+L ++ + +G AII LT IV+ A +PLTK Q S MR L P+++
Sbjct: 334 KPLHTLLSFIQSFVGN------WGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQ 387
Query: 159 AIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTE 218
A++ER D++R+ E LYK +NPL GCLP + +P++I LY AL + L
Sbjct: 388 AMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVE--LRHS 445
Query: 219 GFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISV 277
FF WI T ++A+ Y +LP+L+ S ++ +
Sbjct: 446 PFFGWI------TDLSAQD------------------------PYYILPLLMGASMFM-I 474
Query: 278 KIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+ + + DP Q + F+P+M +F L PSGL LYW +N+++ QQ + K
Sbjct: 475 QKMSPTTVTDP---MQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNVVTLIQQSLIYK 529
>gi|444909857|ref|ZP_21230046.1| Inner membrane protein translocase component YidC, long form
[Cystobacter fuscus DSM 2262]
gi|444719900|gb|ELW60690.1| Inner membrane protein translocase component YidC, long form
[Cystobacter fuscus DSM 2262]
Length = 602
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 118/220 (53%), Gaps = 42/220 (19%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLTV+VK PLT K + S AM+ L P+V+ ++++YA D+ER +E +LY
Sbjct: 405 WGVAIILLTVLVKTLLLPLTHKSMVSMEAMKKLQPRVEELRKKYADDRERQNMEMMKLYS 464
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
A ++PL GCLP L +PVWI L+ AL N D + E FF GP
Sbjct: 465 EAKVSPLGGCLPMLIQMPVWIALFTALRNSYD--IYQEPFF------GPV---------- 506
Query: 241 ISWLFPFVDGHPPLGWSD-TF---AYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
W D T+ YL LP+ L VS I+ K+ Q DP ++ +
Sbjct: 507 ---------------WRDLTYKDPTYL-LPIALGVSMIITQKL--QPQMGDP--AQARLM 546
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKF 336
T FLP++ + P+GL+LY FTNNLLS AQQ L+K+
Sbjct: 547 TWFLPIIFTATLFNYPAGLALYIFTNNLLSIAQQYGLRKW 586
>gi|297539958|ref|YP_003675727.1| membrane protein insertase [Methylotenera versatilis 301]
gi|297259305|gb|ADI31150.1| membrane protein insertase, YidC/Oxa1 family domain containing
protein [Methylotenera versatilis 301]
Length = 542
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 122/244 (50%), Gaps = 44/244 (18%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
WL + + + VL ++ S +H +G AIILLT+++KAA +PL+ K S MR
Sbjct: 327 WLKMVASPLFWVLSLIH---SLVH---NWGVAIILLTLLIKAAFYPLSAKSYRSMAQMRE 380
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP+++++++++ D++++Q LYK INP++GCLP L IPV+I LY L +
Sbjct: 381 LAPRLESMKQKFGDDRQKMQQAMMELYKTEKINPMSGCLPILIQIPVFISLYWML--LGS 438
Query: 213 EGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVV 271
L FF WI L+ VD Y +LP+++ +
Sbjct: 439 IELRHAPFFGWIQDLSA-------------------VD-----------PYYILPIIMGI 468
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
S IIQ+ N P + ++P++ F P+GL LYW NN++S QQ
Sbjct: 469 SM-----IIQTKLNPKPTDPIQAKVMTWMPVIFSVFFFFFPAGLVLYWVVNNIISIWQQW 523
Query: 332 WLQK 335
++ K
Sbjct: 524 YVNK 527
>gi|429203892|ref|ZP_19195199.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces ipomoeae
91-03]
gi|428660573|gb|EKX60122.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces ipomoeae
91-03]
Length = 427
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 116/229 (50%), Gaps = 24/229 (10%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L ++++ PL KQ++++ AM++L P++K IQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDKQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADE---GLLTEGFFWIPSLAGPTTIAAR 235
YK G NPL+ CLP LA P + LY L+++A+ G++ + A +
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLNSIANNDTIGVINQSLL---------QSAQK 146
Query: 236 QNGSGISWLFPFVDGHPPLGWSDT------FAYLVLPVLLVVSQYISVKIIQSSQNND-- 287
+ G F D + D V+ VL+ SQ+ + + + ++N D
Sbjct: 147 AHIFGAPLAAKFTDSSADVAALDASLTTVRIVTAVMIVLMSASQFYTQRQLM-TKNVDTT 205
Query: 288 ---PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P+M F ++ P G+ +YW T N+ + QQ+++
Sbjct: 206 VKTPFMQQQKMLMYIFPIMFAVFGINFPVGVLVYWLTTNVWTMGQQMYV 254
>gi|295678214|ref|YP_003606738.1| membrane protein insertase, YidC/Oxa1 family domain containing
protein [Burkholderia sp. CCGE1002]
gi|295438057|gb|ADG17227.1| membrane protein insertase, YidC/Oxa1 family domain containing
protein [Burkholderia sp. CCGE1002]
Length = 552
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 110/220 (50%), Gaps = 38/220 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++I+LLT+++KA FPL+ +S M+++ P+++A++ER+ GD +++ LYK
Sbjct: 364 WGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKGDPQKMNAALMELYK 423
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRAL-SNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+NP GCLP + IPV+I LY L S+V G +WI L+ +Q+
Sbjct: 424 TEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRG--APWIWWIQDLS-------QQD-- 472
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
Y +LPVL+ VS ++ K+ N P + F
Sbjct: 473 ---------------------PYFILPVLMAVSMFLQTKL-----NPTPPDPVQAKMMMF 506
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGA 339
+P+ P+GL LY+ NN+LS AQQ ++ + GA
Sbjct: 507 MPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMGA 546
>gi|319940691|ref|ZP_08015033.1| inner membrane protein oxaA [Sutterella wadsworthensis 3_1_45B]
gi|319805842|gb|EFW02609.1| inner membrane protein oxaA [Sutterella wadsworthensis 3_1_45B]
Length = 565
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 38/216 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT IVKA +P++ S M+ + P++KA+QE+Y D++R+ LYK
Sbjct: 374 WGWAIVLLTCIVKAVLYPISAAGYRSMARMKEVTPRLKALQEKYKDDKQRLNQAMMELYK 433
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRAL-SNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
INP+ GCLP + IPV++ LY L +V G E W+ LA P
Sbjct: 434 TEKINPVGGCLPIMLQIPVFLALYWVLQGSVELRG--AEWILWVHDLAMPD--------- 482
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
+ VLP L+ + ++ + + N P +
Sbjct: 483 ---------------------PWFVLPALMAATMFLQILL-----NPKPTDPMQAKVMYI 516
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+P++ +GL LYW TNN+LS AQQ W+ K
Sbjct: 517 MPVVFSVMFFIFAAGLVLYWLTNNILSIAQQWWINK 552
>gi|254502069|ref|ZP_05114220.1| 60Kd inner membrane protein [Labrenzia alexandrii DFL-11]
gi|222438140|gb|EEE44819.1| 60Kd inner membrane protein [Labrenzia alexandrii DFL-11]
Length = 608
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 114/238 (47%), Gaps = 23/238 (9%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W +T M + L H +G AI+L+TVI+K FPL K S M+
Sbjct: 362 WFYFLTKPMFYAIDFL------FHYFGNFGVAILLVTVIIKLFFFPLANKSYVSMSKMKL 415
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
+ PQ+ I+E+YA D+++ Q LYK INPLAGCLP L IPV+ LY+ L V
Sbjct: 416 VQPQMTEIREKYADDRQKQQQALMELYKKEKINPLAGCLPILIQIPVFFALYKVLF-VTI 474
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E F WI L+ P + LF + PP V P+++ ++
Sbjct: 475 EMRHAPFFGWIQDLSAPDPTSLFN-------LFGLIPWDPP----QLLMLGVWPLIMGIT 523
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
++ +K+ N P + Q + ++P++ + S P+GL +YW NN LS AQQ
Sbjct: 524 MFVQMKM-----NPAPPDPTQQMIFTWMPVVFTFMLASFPAGLVIYWAWNNSLSIAQQ 576
>gi|323527919|ref|YP_004230072.1| membrane protein insertase, YidC/Oxa1 family domain containing
[Burkholderia sp. CCGE1001]
gi|407715262|ref|YP_006835827.1| preprotein translocase subunit YidC [Burkholderia phenoliruptrix
BR3459a]
gi|323384921|gb|ADX57012.1| membrane protein insertase, YidC/Oxa1 family domain containing
[Burkholderia sp. CCGE1001]
gi|407237446|gb|AFT87645.1| preprotein translocase subunit YidC [Burkholderia phenoliruptrix
BR3459a]
Length = 552
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 38/219 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+++ P+++A++ER+ GD +++ LYK
Sbjct: 364 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKGDPQKMNAALMELYK 423
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRAL-SNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+NP GCLP + IPV+I LY L S+V G WI L+ +Q+
Sbjct: 424 TEKVNPFGGCLPVVVQIPVFISLYWVLLSSVEMRG--APWILWIHDLS-------QQD-- 472
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
Y +LPVL+ VS ++ K+ N P + F
Sbjct: 473 ---------------------PYFILPVLMAVSMFLQTKL-----NPTPPDPVQAKMMMF 506
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGG 338
+P+ P+GL LY+ NN+LS AQQ ++ + G
Sbjct: 507 MPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545
>gi|330993393|ref|ZP_08317328.1| Inner membrane protein oxaA [Gluconacetobacter sp. SXCC-1]
gi|329759423|gb|EGG75932.1| Inner membrane protein oxaA [Gluconacetobacter sp. SXCC-1]
Length = 578
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 122/245 (49%), Gaps = 23/245 (9%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + +T + TVL L + +G A++ T++VKA FPL KQ S MR
Sbjct: 333 WFAFLTRPIFTVLDWLNTMLGN------FGLALMAFTLLVKALFFPLATKQFHSMGKMRQ 386
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P++KA++ERY DQ + + LYK G+NP +GCLP L IPV+ LY+ L V
Sbjct: 387 LQPKIKALRERYKDDQMALNQQMIGLYKQEGVNPASGCLPMLLQIPVFWCLYKDLY-VTI 445
Query: 213 EGLLTEGFFWIPSLAG--PTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLV 270
E F WI L+ PT + LF + +P + S + P+
Sbjct: 446 EMRHAPFFGWIHDLSAFDPTNLFT---------LFGLIPWNPSVI-SPMLQLGLWPIAFG 495
Query: 271 VSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
++ + ++ + + DP + Q + F+P++ +F PSGL +Y+ NNLL+ AQQ
Sbjct: 496 LTMFAQMR-LNPTPTADP---AQQKMFQFMPIIFTFFMARQPSGLVIYYCWNNLLTMAQQ 551
Query: 331 VWLQK 335
+Q+
Sbjct: 552 TLIQR 556
>gi|219684221|ref|ZP_03539165.1| inner membrane protein OxaA [Borrelia garinii PBr]
gi|219672210|gb|EED29263.1| inner membrane protein OxaA [Borrelia garinii PBr]
Length = 544
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 110/215 (51%), Gaps = 18/215 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +II LT++V+ FPLT K ++ + L P++K +Q ++ D +++ E RLYK
Sbjct: 343 WGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKFKHDPKKLNEEMGRLYK 402
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G+NPL GC P + +P++ LY ++N+ L G +IP +I G
Sbjct: 403 EEGVNPLGGCFPIILQLPIFFALYSLVNNL----FLLRGASFIPGWIDDLSIGDSVYHFG 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF- 299
F + W+D +LP +++ +Q S I SS + N+ + Q F
Sbjct: 459 YKLYF--------VSWTDI---RILPFIMMFTQLGST--IVSSNLDLKNLGAQQKFLYFG 505
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
+P+M + ++PSGL +YW T N+ + QQ +++
Sbjct: 506 MPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIK 540
>gi|78357437|ref|YP_388886.1| YidC/Oxa1 family membrane protein insertase [Desulfovibrio
alaskensis G20]
gi|123552065|sp|Q30YQ5.1|YIDC_DESDG RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|78219842|gb|ABB39191.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio
alaskensis G20]
Length = 536
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 28/215 (13%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG AII+LT++VK +PL++K +S M+ L P V+ I+E+Y D++R+ E LYK
Sbjct: 348 YGVAIIILTILVKLLFWPLSQKSYKSMEQMKKLQPMVQKIKEKYGDDRQRMNQEVMELYK 407
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP L IPV++GLY+ L N + L F A +
Sbjct: 408 TYKVNPAGGCLPMLLQIPVFLGLYQGLLNAIE---LRHAPF-----------IAHLPFTD 453
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I WL P + + PV++ + ++Q P + + F+
Sbjct: 454 IVWLADLSAKDP---------FYITPVVMGATM-----LLQQRLTPAPADPTQAKIMMFM 499
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++ + L+ P+GL +YW NN+LS QQ W+ +
Sbjct: 500 PVVFTFMFLNFPAGLVVYWLVNNVLSIGQQWWMLR 534
>gi|319639364|ref|ZP_07994115.1| inner membrane protein oxaA [Neisseria mucosa C102]
gi|317399548|gb|EFV80218.1| inner membrane protein oxaA [Neisseria mucosa C102]
Length = 548
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 103/215 (47%), Gaps = 46/215 (21%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII+LT+IVKA +PLT S MR+ AP+++AI+E+Y D+ Q +LYK
Sbjct: 357 WGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDRMAQQQAMMQLYK 416
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY AL ++ RQ
Sbjct: 417 DEKINPLGGCLPMLLQIPVFIGLYWALF---------------------ASVELRQA--- 452
Query: 241 ISWLFPFVDGHPPLGWSDTFA----YLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQA- 295
P LGW + + +LP+++ + + + N P+ QA
Sbjct: 453 -----------PWLGWITDLSRPDPFYILPLIMAATMFAQTYL------NPPSTDPMQAK 495
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+ +PL+ P+GL LYW NNLL+ AQQ
Sbjct: 496 MMKVMPLIFSIMFFFFPAGLVLYWVVNNLLTIAQQ 530
>gi|323496920|ref|ZP_08101948.1| membrane protein insertase [Vibrio sinaloensis DSM 21326]
gi|323317994|gb|EGA70977.1| membrane protein insertase [Vibrio sinaloensis DSM 21326]
Length = 539
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 119/244 (48%), Gaps = 43/244 (17%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
WL I + ++L +++ +S +G AII LT IV+ A +PLTK Q S MR
Sbjct: 328 WLWFIAKPLHSLLSLIQGLVSN------WGIAIICLTFIVRGAMYPLTKAQYTSMAKMRM 381
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+++A++ER D++R+ E LYK +NPL GCLP + +P++I LY AL +
Sbjct: 382 LQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVE 441
Query: 213 EGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVV 271
L FF WI L+ Y +LP+L+
Sbjct: 442 --LRHSPFFGWIHDLSAQD------------------------------PYYILPLLMGA 469
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
S ++ ++ + + DP Q + F+P+M +F L PSGL LYW +N+++ QQ
Sbjct: 470 SMFL-IQKMSPTTVTDP---MQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQT 525
Query: 332 WLQK 335
+ K
Sbjct: 526 LIYK 529
>gi|395771384|ref|ZP_10451899.1| inner membrane protein translocase component YidC [Streptomyces
acidiscabies 84-104]
Length = 428
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 120/227 (52%), Gaps = 20/227 (8%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L ++++ PL KQ++++ AM++L P++K IQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDRQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ-N 237
YK G NPL+ CLP LA P + LY LS +A T G LA +ARQ +
Sbjct: 96 YKDTGTNPLSSCLPILAQSPFFFALYHVLSAIASGK--TIGVINNDLLA-----SARQAH 148
Query: 238 GSGISWLFPFVDGHP---PLGWSDTFAYLVLPVLLVV---SQYISVKIIQSSQNND---- 287
G F DG LG T +V +++V+ SQ+ + + + ++N D
Sbjct: 149 IFGAPLAVKFTDGASKVEALGAHITDVRVVTAIMIVLMSASQFFTQRQLM-TKNVDTTVK 207
Query: 288 -PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P+M F ++ P G+ +YW T N+ + QQ+++
Sbjct: 208 TPYMQQQKMLMYIFPVMFAVFGINFPVGVLVYWLTTNVWTMGQQMFV 254
>gi|307731536|ref|YP_003908760.1| membrane protein insertase, YidC/Oxa1 family domain containing
protein [Burkholderia sp. CCGE1003]
gi|307586071|gb|ADN59469.1| membrane protein insertase, YidC/Oxa1 family domain containing
protein [Burkholderia sp. CCGE1003]
Length = 552
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 38/219 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+++ P+++A++ER+ GD +++ LYK
Sbjct: 364 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKGDPQKMNAALMELYK 423
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRAL-SNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+NP GCLP + IPV+I LY L S+V G WI L+ +Q+
Sbjct: 424 TEKVNPFGGCLPVVVQIPVFISLYWVLLSSVEMRG--APWILWIHDLS-------QQD-- 472
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
Y +LPVL+ VS ++ K+ N P + F
Sbjct: 473 ---------------------PYFILPVLMAVSMFLQTKL-----NPTPPDPVQAKMMMF 506
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGG 338
+P+ P+GL LY+ NN+LS AQQ ++ + G
Sbjct: 507 MPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545
>gi|302543969|ref|ZP_07296311.1| membrane protein OxaA [Streptomyces hygroscopicus ATCC 53653]
gi|302461587|gb|EFL24680.1| membrane protein OxaA [Streptomyces himastatinicus ATCC 53653]
Length = 378
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 124/229 (54%), Gaps = 24/229 (10%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L V+++ PL KQ++++ M++L P++KAIQERY D++R E +L
Sbjct: 33 WAWGLSIVSLVVLIRICLIPLFVKQIKATRNMQALQPKMKAIQERYKSDKQRQSEEMMKL 92
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADE---GLLTEGFFWIPSLAGPTTIAAR 235
YK G NPL+ CLP LA P +I LY+ L+++A+ G++ + + A
Sbjct: 93 YKETGTNPLSSCLPILAQSPFFIALYQVLNHIANNKTVGVIDQSLL-------DSARNAH 145
Query: 236 QNGSGISWLFPFVDGHPP---LGWSDTFAYLV---LPVLLVVSQYISVKIIQSSQNND-- 287
G+ +S F+D LG S T +V + VL+ SQ+ + + + ++N D
Sbjct: 146 IFGAPLS--VKFMDSASKVESLGASLTDVRVVTITMIVLMSASQFFTQRQLM-TKNVDLS 202
Query: 288 ---PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P+M F ++ P G+ +YW T N+ + QQ+++
Sbjct: 203 VKTPFMQQQKMLMYVFPIMFAVFGINFPVGVLVYWLTTNVWTLGQQMFV 251
>gi|268593980|ref|ZP_06128147.1| inner membrane protein oxaA [Neisseria gonorrhoeae 35/02]
gi|268547369|gb|EEZ42787.1| inner membrane protein oxaA [Neisseria gonorrhoeae 35/02]
Length = 545
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 100/214 (46%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI++LT+IVKA +PLT S MR+ AP+++ I+E+Y D+ Q +LYK
Sbjct: 354 WGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQTIKEKYGDDRMAQQQAMMQLYK 413
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY AL ++ RQ
Sbjct: 414 DEKINPLGGCLPMLLQIPVFIGLYWALF---------------------ASVELRQA--- 449
Query: 241 ISWLFPFVDGHPPLGW----SDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P LGW S Y +LP+++ + + Q+ N P +
Sbjct: 450 -----------PWLGWITDLSRADPYYILPIIMAATMF-----AQTYLNPPPTDPMQAKM 493
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ P+GL LYW NNLL+ AQQ
Sbjct: 494 MKIMPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 527
>gi|251772740|gb|EES53302.1| putative inner-membrane protein [Leptospirillum ferrodiazotrophum]
Length = 399
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 37/253 (14%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYA-YGFAIILLTVIVKAATFPLTKKQVESSMAMR 151
+L G ++ + K L +STL+ YGFAII +T+++K PL S M+
Sbjct: 183 FLFGRITLVSFLAKFLFVFLSTLYTHMQNYGFAIIFVTLLIKILFSPLAYMSFRSMNQMQ 242
Query: 152 SLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVA 211
L P++K +Q +Y D+ ++ LYK INPL GCLP + IPV++ LY L+N
Sbjct: 243 QLQPEIKKLQAKYKDDKAQLNAAMMELYKERRINPLGGCLPVIVQIPVFVALYNILNN-- 300
Query: 212 DEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVV 271
T+ RQ PF+ L D Y + P+++ +
Sbjct: 301 -------------------TVELRQA--------PFLLWIHDLSIKD--PYYIFPIIMGI 331
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
+ I K+ S+ DP + + FLP+++ +F L+ PSGL LYW NNLL+ QQ
Sbjct: 332 TMVIQTKLTPSTP--DP---MQRRIMLFLPVVMTFFFLNFPSGLVLYWIVNNLLTIGQQY 386
Query: 332 WLQKFGGAKDPMK 344
L ++ P K
Sbjct: 387 VLMRYVFKTIPAK 399
>gi|357383146|ref|YP_004897870.1| inner membrane protein translocase component YidC, long form
[Pelagibacterium halotolerans B2]
gi|351591783|gb|AEQ50120.1| inner membrane protein translocase component YidC, long form
[Pelagibacterium halotolerans B2]
Length = 608
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 121/242 (50%), Gaps = 20/242 (8%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W IT M ++++L + + +G AI+ +TVIVKA FPL K S MR
Sbjct: 359 WFHFITKPMFYLIRLLFEFLGN------FGLAILAVTVIVKAIFFPLANKSYASMANMRR 412
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
+ P++K IQE++ D+ Q LYK INP++GC P L IPV+ LY+ L V
Sbjct: 413 VQPKMKEIQEKHKDDRAAQQQAMMELYKTEKINPISGCWPILIQIPVFFALYKVLF-VTI 471
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E F WI LA P N G L P+ P+ S A + PV++ ++
Sbjct: 472 EMRHAPFFGWIQDLAAPDPTHIF-NLFG---LLPYDPSAVPVIGS-FLAIGIWPVIMGIT 526
Query: 273 QYISVKIIQSSQNNDPNMKSSQALT-NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
++ +++ N P +QA+ N++P++ + + P+GL +YW NN LS QQ
Sbjct: 527 MWVQMRL------NPPPADPTQAMIFNWMPVIFTFMLATFPAGLVIYWAWNNFLSVVQQ- 579
Query: 332 WL 333
W+
Sbjct: 580 WI 581
>gi|431929438|ref|YP_007242472.1| preprotein translocase subunit YidC [Pseudomonas stutzeri RCH2]
gi|431827725|gb|AGA88842.1| preprotein translocase subunit YidC [Pseudomonas stutzeri RCH2]
Length = 556
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 109/215 (50%), Gaps = 36/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++II+LT+I+K A FPL+ S MR+++P+++A++E++ D++++ LYK
Sbjct: 369 WGWSIIVLTIIIKLAFFPLSAASYRSMARMRAVSPKMQALKEQFGDDRQKMSQAMMELYK 428
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L +PV++ LY L ++ RQ
Sbjct: 429 KEKINPLGGCLPILVQMPVFLALYWVLLE---------------------SVEMRQA--- 464
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+F D L D F +LP+++ V+ +I Q N P + L
Sbjct: 465 -PWMFWITD----LSIKDPF--FILPIIMGVTMFI-----QQQLNPTPPDPMQARVMKLL 512
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++ +F L P+GL LYW NN+LS AQQ ++ +
Sbjct: 513 PIIFTFFFLWFPAGLVLYWVVNNVLSIAQQWYITR 547
>gi|418055469|ref|ZP_12693524.1| Membrane protein oxaA [Hyphomicrobium denitrificans 1NES1]
gi|353211051|gb|EHB76452.1| Membrane protein oxaA [Hyphomicrobium denitrificans 1NES1]
Length = 624
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 120/224 (53%), Gaps = 21/224 (9%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+ +G I++LTV+VKAA +PL KQ ES M+ L P+++ I+E+Y D +R Q E L
Sbjct: 394 HNFGITILILTVLVKAAFYPLANKQYESMARMKKLQPEMQRIKEQYKDDTQRQQKEIFEL 453
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQN 237
Y+ INPLAGC P L IPV+ LY+ L D + FF WI L+ P + N
Sbjct: 454 YRTQKINPLAGCWPVLLQIPVFFALYKVLFVTID--MRHAPFFGWIHDLSAPDPTSLF-N 510
Query: 238 GSGISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
G L PF DG +F ++ + P+++ ++ ++ +++ N Q +
Sbjct: 511 LFG---LLPF-DG-------PSFLHIGIWPLIMGITMWMQMQL-----NPPQPDPIQQQV 554
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
++P++ + S P+GL +YW +N LS QQ+ + K GA+
Sbjct: 555 FQWMPVVFTFMLASFPAGLVIYWAWSNTLSILQQLRINKKNGAE 598
>gi|59802471|ref|YP_209183.1| inner membrane protein translocase component YidC [Neisseria
gonorrhoeae FA 1090]
gi|240015755|ref|ZP_04722295.1| putative inner membrane protein translocase component YidC
[Neisseria gonorrhoeae FA6140]
gi|254492908|ref|ZP_05106079.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae 1291]
gi|268598157|ref|ZP_06132324.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae MS11]
gi|268600501|ref|ZP_06134668.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID18]
gi|268683454|ref|ZP_06150316.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae
SK-92-679]
gi|293397800|ref|ZP_06642006.1| inner membrane protein oxaA [Neisseria gonorrhoeae F62]
gi|75507262|sp|Q5F4W6.1|YIDC_NEIG1 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|59719366|gb|AAW90771.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
gi|226511948|gb|EEH61293.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae 1291]
gi|268582288|gb|EEZ46964.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae MS11]
gi|268584632|gb|EEZ49308.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID18]
gi|268623738|gb|EEZ56138.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae
SK-92-679]
gi|291611746|gb|EFF40815.1| inner membrane protein oxaA [Neisseria gonorrhoeae F62]
Length = 545
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 100/214 (46%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI++LT+IVKA +PLT S MR+ AP+++ I+E+Y D+ Q +LYK
Sbjct: 354 WGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQTIKEKYGDDRMAQQQAMMQLYK 413
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY AL ++ RQ
Sbjct: 414 DEKINPLGGCLPMLLQIPVFIGLYWALF---------------------ASVELRQ---- 448
Query: 241 ISWLFPFVDGHPPLGW----SDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P LGW S Y +LP+++ + + Q+ N P +
Sbjct: 449 ----------APWLGWITDLSRADPYYILPIIMAATMF-----AQTYLNPPPTDPMQAKM 493
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ P+GL LYW NNLL+ AQQ
Sbjct: 494 MKIMPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 527
>gi|409396501|ref|ZP_11247487.1| membrane protein insertase [Pseudomonas sp. Chol1]
gi|409118982|gb|EKM95372.1| membrane protein insertase [Pseudomonas sp. Chol1]
Length = 554
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 110/215 (51%), Gaps = 36/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++II+LT+I+K A FPL+ +S MR+++P+++A++++Y D++++ LYK
Sbjct: 368 WGWSIIVLTIIIKLAFFPLSAASYKSMARMRAVSPKMQALKDQYGDDRQKLSQAMMELYK 427
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP + +PV++ LY L ++ RQ
Sbjct: 428 KEKINPLGGCLPIIVQMPVFLALYWVLLE---------------------SVEMRQA--- 463
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+F D L D F +LP+++ V+ +I Q N P + L
Sbjct: 464 -PWMFWITD----LSIKDPF--FILPIIMGVTMFI-----QQQLNPTPPDPMQAKVMKLL 511
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++ +F L P+GL LYW NN+LS AQQ ++ +
Sbjct: 512 PIIFTFFFLWFPAGLVLYWVVNNVLSIAQQWYITR 546
>gi|268681283|ref|ZP_06148145.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID332]
gi|268685760|ref|ZP_06152622.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae
SK-93-1035]
gi|291044698|ref|ZP_06570407.1| inner membrane protein oxaA [Neisseria gonorrhoeae DGI2]
gi|268621567|gb|EEZ53967.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID332]
gi|268626044|gb|EEZ58444.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae
SK-93-1035]
gi|291011592|gb|EFE03588.1| inner membrane protein oxaA [Neisseria gonorrhoeae DGI2]
Length = 545
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 100/214 (46%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI++LT+IVKA +PLT S MR+ AP+++ I+E+Y D+ Q +LYK
Sbjct: 354 WGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQTIKEKYGDDRMAQQQAMMQLYK 413
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY AL ++ RQ
Sbjct: 414 DEKINPLGGCLPMLLQIPVFIGLYWALF---------------------ASVELRQ---- 448
Query: 241 ISWLFPFVDGHPPLGW----SDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P LGW S Y +LP+++ + + Q+ N P +
Sbjct: 449 ----------APWLGWITDLSRADPYYILPIIMAATMF-----AQTYLNPPPTDPMQAKM 493
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ P+GL LYW NNLL+ AQQ
Sbjct: 494 MKIMPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 527
>gi|349686495|ref|ZP_08897637.1| translocase inner membrane component [Gluconacetobacter oboediens
174Bp2]
Length = 585
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 122/245 (49%), Gaps = 23/245 (9%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + +T + TVL L + +G A++ T++VKA FPL KQ S MR
Sbjct: 340 WFAFLTRPIFTVLDWLNTMLGN------FGLALMAFTLLVKALFFPLATKQFHSMGKMRQ 393
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P++KA++ERY DQ + + LYK G+NP +GCLP L IPV+ LY+ L V
Sbjct: 394 LQPKIKALRERYKDDQMALNQQMIALYKQEGVNPASGCLPMLLQIPVFWCLYKDLY-VTI 452
Query: 213 EGLLTEGFFWIPSLAG--PTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLV 270
E F WI L+ PT + LF + +P + S + P+
Sbjct: 453 EMRHAPFFGWIHDLSSFDPTNLFT---------LFGLIPWNPSVI-SPMLQLGLWPIAFG 502
Query: 271 VSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
++ + ++ + + DP + Q + F+P++ +F PSGL +Y+ NNLL+ AQQ
Sbjct: 503 LTMFAQMR-LNPAPAADP---AQQKMFQFMPIIFTFFMARQPSGLVIYYCWNNLLTMAQQ 558
Query: 331 VWLQK 335
+Q+
Sbjct: 559 TLIQR 563
>gi|229586285|ref|YP_002844786.1| putative inner membrane protein translocase component YidC
[Rickettsia africae ESF-5]
gi|259515719|sp|C3PM83.1|YIDC_RICAE RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|228021335|gb|ACP53043.1| Preprotein translocase subunit YidC [Rickettsia africae ESF-5]
Length = 560
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 118/222 (53%), Gaps = 27/222 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L K S M++L P++ I+ Y+ D+ R+ E LYK
Sbjct: 361 FGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEIMALYK 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
+NP+AGCLP L IPV+ +Y+ L V E + WI L+ PTTI N
Sbjct: 421 KEKVNPVAGCLPILVQIPVFFSIYKVLY-VTIEMRQAPFYGWIKDLSASDPTTIF---NL 476
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G L PF PPL +L++ P+L+ ++ ++ K+ S + DP M++
Sbjct: 477 FG---LLPF---SPPL-------FLMIGAWPILMAITMFLQQKM--SPEPADP-MQAQ-- 518
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
+ F+PL+ + S P GL +YW NN+LS QQ ++ KF
Sbjct: 519 VMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQQYYINKFN 560
>gi|90581132|ref|ZP_01236931.1| putative inner membrane protein translocase component YidC
[Photobacterium angustum S14]
gi|90437653|gb|EAS62845.1| putative inner membrane protein translocase component YidC [Vibrio
angustum S14]
Length = 230
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 105/213 (49%), Gaps = 41/213 (19%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII+LT+IV+ +PLTK Q S MR L P+++A++ER D++R E LYK
Sbjct: 37 WGVAIIILTLIVRGLMYPLTKAQYTSMAKMRMLQPKIQAMRERCGDDRQRQSQEMMELYK 96
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPL GCLP L +P++I LY L N++ E F WI +L+
Sbjct: 97 KEKVNPLGGCLPLLIQMPIFIALYTVL-NLSTELRNAPFFGWIQNLSAQD---------- 145
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKS---SQALT 297
Y VLP+L+ +S + Q N P+ + Q +
Sbjct: 146 --------------------PYYVLPILMGISMFF-------IQKNSPSTVTDPMQQKIM 178
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
F+P++ F L P+GL LYW T+N+++ QQ
Sbjct: 179 TFMPVIFTVFFLYFPAGLVLYWLTSNIVTLIQQ 211
>gi|261410107|ref|YP_003246348.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus sp.
Y412MC10]
gi|329925107|ref|ZP_08280051.1| putative stage III sporulation protein J [Paenibacillus sp. HGF5]
gi|261286570|gb|ACX68541.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus sp.
Y412MC10]
gi|328940226|gb|EGG36558.1| putative stage III sporulation protein J [Paenibacillus sp. HGF5]
Length = 296
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 34/215 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG +++++ +IV+ PLT KQV SS AM+++ P+++ I+E+Y E++Q+ET +L++
Sbjct: 69 YGLSVLVMVLIVRTLILPLTLKQVRSSKAMQAIQPEIQKIREKYKDQPEKVQMETMKLFQ 128
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+AGCLP + +P++I LY ++ + L F W+ L P +
Sbjct: 129 ENKVNPMAGCLPLIVQMPIFIALYHSIY--YNNLLRDHEFLWL-QLGQPDKL-------- 177
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+LPVL + Y K++ N P M Q +
Sbjct: 178 ----------------------FILPVLAAATTYFQTKMMM-KMNPSPQMGMMQFMLFVY 214
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++I + PS L LYWF +NL + Q +L +
Sbjct: 215 PILIFVMSFQFPSALPLYWFYSNLYTIVQNYFLYR 249
>gi|359409461|ref|ZP_09201929.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[SAR116 cluster alpha proteobacterium HIMB100]
gi|356676214|gb|EHI48567.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[SAR116 cluster alpha proteobacterium HIMB100]
Length = 582
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 113/219 (51%), Gaps = 22/219 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII T+IV+ FPL K +S MR LAP+++ ++ Y D++R+ E LYK
Sbjct: 374 FGLAIIGFTIIVRLLLFPLANKSYKSMAKMRHLAPKIQKMRADYGDDKQRLNKEMMELYK 433
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
+NP AGCLP L IPV+ LY+ L V+ E F WI L+ PT+I N
Sbjct: 434 REKVNPAAGCLPILLQIPVFFALYKVL-YVSIEMRHAPFFGWIQDLSAIDPTSIF---NL 489
Query: 239 SGISWLFPF-VDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQA-L 296
G L P+ VD P + + P+L+ +S + +++ N P QA +
Sbjct: 490 FG---LLPYSVDFMPQF-----LSIGIWPILMGISMAVQMRL------NPPPPDPIQAKI 535
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
++P+ + P+GL +YW NN+LS AQQ W+ +
Sbjct: 536 FQWMPVFFTFLLAGFPAGLVIYWTWNNILSVAQQWWITR 574
>gi|300692995|ref|YP_003753990.1| insertase [Ralstonia solanacearum PSI07]
gi|299080055|emb|CBJ52730.1| cytoplasmic insertase, essential for proper integration of ATPase
into the membrane [Ralstonia solanacearum PSI07]
Length = 554
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 124/282 (43%), Gaps = 54/282 (19%)
Query: 63 LGVAERLLFTLADAAVSSSDAVTTTKQNSDWLSGITNVMETV---------LKVLKDGMS 113
+G+ E L A +S++ + Q L GIT +E V K L +
Sbjct: 296 IGIQEPLGTVAPGANISATARLFAGPQEERMLEGITPGLELVKDYGWLTIIAKPLFWLLE 355
Query: 114 TLHVPYA-YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQ 172
+H+ +G++I+ LTV+VK FPL+ S M+ L P++ AI+ER+ GD +++
Sbjct: 356 KIHLLLGNWGWSIVGLTVLVKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHKGDPQKMN 415
Query: 173 LETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTI 232
E +LY+ +NPL GCLP + IPV+I LY L + +
Sbjct: 416 QEMMQLYRTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVE-------------------- 455
Query: 233 AARQNGSGISWLFPFVDGHPPLGWSDTFA----YLVLPVLLVVSQYISVKIIQSSQNNDP 288
+ G P LGW A + +LP+L+ VS + +Q+ N P
Sbjct: 456 ---------------MRGAPWLGWVHDLASPDPFYILPILMAVSMF-----VQTRLNPTP 495
Query: 289 NMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+ F+P+ P+GL LYW NN LS AQQ
Sbjct: 496 PDPVQAKMMMFMPIAFSVMFFFFPAGLVLYWVVNNCLSIAQQ 537
>gi|383501017|ref|YP_005414376.1| membrane protein insertase [Rickettsia australis str. Cutlack]
gi|378932028|gb|AFC70533.1| membrane protein insertase [Rickettsia australis str. Cutlack]
Length = 560
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 116/220 (52%), Gaps = 23/220 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L K S M++L P++ I+ Y+ D+ R+ E LYK
Sbjct: 361 FGISILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEIMALYK 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+AGCLP L IPV+ +Y+ L V E + WI L+ P + +
Sbjct: 421 KEKVNPVAGCLPILVQIPVFFSIYKVLY-VTIEMRQAPFYGWIKDLSAP-------DPTT 472
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQALT 297
I LF + PP ++LV+ P+L+ ++ ++ K+ S + DP M++ +
Sbjct: 473 IFNLFGLLPLSPP-------SFLVIGVWPILMAITMFLQQKM--SPEPADP-MQAQ--VM 520
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
F+PL+ + S P GL +YW NN+LS QQ ++ KF
Sbjct: 521 KFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQQYYINKFN 560
>gi|375264035|ref|YP_005021478.1| membrane protein insertase [Vibrio sp. EJY3]
gi|369839360|gb|AEX20504.1| membrane protein insertase [Vibrio sp. EJY3]
Length = 540
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 118/244 (48%), Gaps = 43/244 (17%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
WL I + +L ++ +S +G AIILLT +V+ A +PLTK Q S MR
Sbjct: 329 WLWFIAKPLHWLLSMIHGFVSN------WGVAIILLTFVVRGAMYPLTKAQYTSMAKMRM 382
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+++A++ER D++R+ E LYK +NPL GCLP + +P++I LY AL +
Sbjct: 383 LQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFISLYWALMESVE 442
Query: 213 EGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVV 271
L FF WI L+ Y +LP+L+
Sbjct: 443 --LRHSPFFGWIHDLSAQD------------------------------PYYILPLLMGA 470
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
S ++ ++ + + DP Q + F+P+M +F L PSGL LYW +N+++ QQ
Sbjct: 471 SMFM-IQKMSPTTVTDP---MQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQT 526
Query: 332 WLQK 335
+ K
Sbjct: 527 LIYK 530
>gi|302552691|ref|ZP_07305033.1| membrane protein [Streptomyces viridochromogenes DSM 40736]
gi|302470309|gb|EFL33402.1| membrane protein [Streptomyces viridochromogenes DSM 40736]
Length = 428
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 118/229 (51%), Gaps = 24/229 (10%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L ++++ PL KQ++S+ AM++L P++K IQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKSTRAMQTLQPEMKKIQERYKNDKQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADE---GLLTEGFFWIPSLAGPTTIAAR 235
YK G NPL+ CLP LA P + LY L+ +A G++ + A +
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLNGIATGDTIGVINQSLL---------QSAQK 146
Query: 236 QNGSGISWLFPFVDGHP---PLGWSDTFAYLVLPVLLVV---SQYISVKIIQSSQNND-- 287
+ G F D LG S T +V +++V+ SQ+ + + + ++N D
Sbjct: 147 AHIVGAPLAAKFTDSSSKVEALGASLTDVRVVTAIMIVLMSASQFFTQRQLM-TKNVDTT 205
Query: 288 ---PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P+M F ++ P G+ +YW T N+ + QQ+++
Sbjct: 206 VKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTMGQQMYV 254
>gi|238021627|ref|ZP_04602053.1| hypothetical protein GCWU000324_01529 [Kingella oralis ATCC 51147]
gi|237866241|gb|EEP67283.1| hypothetical protein GCWU000324_01529 [Kingella oralis ATCC 51147]
Length = 568
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 113/219 (51%), Gaps = 47/219 (21%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERI--QLETARL 178
+G+AII+LT+IVKA FPL +K +S MRS+ P+++A++++Y ++R+ Q E +L
Sbjct: 360 WGWAIIVLTLIVKAILFPLNQKAYKSMAKMRSIQPKMEALKKKYPNPEDRMAMQQELMKL 419
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNG 238
Y+ INPL GCLP L +P++IGLY W+ L ++ RQ
Sbjct: 420 YRDEKINPLGGCLPMLIQMPIFIGLY-----------------WMIFL----SVELRQ-- 456
Query: 239 SGISWLFPFVDGHPPLGWSDTFA----YLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQ 294
P LGW + + +LP+L+ V+ Y+ K+ S +DP +
Sbjct: 457 ------------APWLGWIHDLSRPDPFYILPILMAVTMYLQTKM--SPPPSDP---TQA 499
Query: 295 ALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
+ +PLM P+ L LY+ NNLL+ AQQ WL
Sbjct: 500 QMMKIMPLMFSVMFFFFPAALVLYYVVNNLLTIAQQ-WL 537
>gi|209886640|ref|YP_002290497.1| inner membrane protein translocase component YidC [Oligotropha
carboxidovorans OM5]
gi|337739847|ref|YP_004631575.1| inner membrane protein OxaA [Oligotropha carboxidovorans OM5]
gi|386028865|ref|YP_005949640.1| inner membrane protein OxaA [Oligotropha carboxidovorans OM4]
gi|209874836|gb|ACI94632.1| inner membrane protein OxaA [Oligotropha carboxidovorans OM5]
gi|336093933|gb|AEI01759.1| inner membrane protein OxaA [Oligotropha carboxidovorans OM4]
gi|336097511|gb|AEI05334.1| inner membrane protein OxaA [Oligotropha carboxidovorans OM5]
Length = 610
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 115/223 (51%), Gaps = 17/223 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+L+TV +KA FPL K S M+++ PQ+ A++E+Y D+ + Q E +YK
Sbjct: 385 FGVAILLVTVAIKAVFFPLANKSYASMAKMKAVQPQLTALKEKYPDDRVKQQQEMMEIYK 444
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INP+AGCLP IPV+ LY+ L + E F WI L+ P N G
Sbjct: 445 KEKINPIAGCLPIAIQIPVFFALYKVLF-ITIEMRHAPFFGWIRDLSAPDPTHIF-NLFG 502
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQALT 297
L PF PL YL + PV++ ++ + +K+ + Q DP K +
Sbjct: 503 ---LLPFDPSAVPL----IGTYLAIGAWPVIMGITMWFQMKL--NPQPPDPTQK---MIF 550
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+++P++ + S P+GL +YW NNLLS QQ + K G K
Sbjct: 551 DWMPVVFTFMLASFPAGLVIYWAWNNLLSVLQQSAIMKKNGVK 593
>gi|126701305|ref|YP_001090202.1| sporulation membrane protein SpoIIIJ [Clostridium difficile 630]
gi|254977339|ref|ZP_05273811.1| putative sporulation membrane protein [Clostridium difficile
QCD-66c26]
gi|255102896|ref|ZP_05331873.1| putative sporulation membrane protein [Clostridium difficile
QCD-63q42]
gi|255308716|ref|ZP_05352887.1| putative sporulation membrane protein [Clostridium difficile ATCC
43255]
gi|255316423|ref|ZP_05358006.1| putative sporulation membrane protein [Clostridium difficile
QCD-76w55]
gi|255519083|ref|ZP_05386759.1| putative sporulation membrane protein [Clostridium difficile
QCD-97b34]
gi|255652266|ref|ZP_05399168.1| putative sporulation membrane protein [Clostridium difficile
QCD-37x79]
gi|260685220|ref|YP_003216505.1| sporulation membrane protein [Clostridium difficile CD196]
gi|260688879|ref|YP_003220013.1| sporulation membrane protein [Clostridium difficile R20291]
gi|306521981|ref|ZP_07408328.1| putative sporulation membrane protein [Clostridium difficile
QCD-32g58]
gi|384362907|ref|YP_006200759.1| sporulation membrane protein [Clostridium difficile BI1]
gi|423082988|ref|ZP_17071570.1| membrane protein insertase, YidC/Oxa1 family [Clostridium difficile
002-P50-2011]
gi|423086512|ref|ZP_17074917.1| membrane protein insertase, YidC/Oxa1 family [Clostridium difficile
050-P50-2011]
gi|423088751|ref|ZP_17077125.1| membrane protein insertase, YidC/Oxa1 family [Clostridium difficile
70-100-2010]
gi|115252742|emb|CAJ70587.1| Sporulation membrane protein SpoIIIJ [Clostridium difficile 630]
gi|260211383|emb|CBA67040.1| putative sporulation membrane protein [Clostridium difficile CD196]
gi|260214896|emb|CBE07703.1| putative sporulation membrane protein [Clostridium difficile
R20291]
gi|357546716|gb|EHJ28625.1| membrane protein insertase, YidC/Oxa1 family [Clostridium difficile
050-P50-2011]
gi|357547067|gb|EHJ28966.1| membrane protein insertase, YidC/Oxa1 family [Clostridium difficile
002-P50-2011]
gi|357559157|gb|EHJ40617.1| membrane protein insertase, YidC/Oxa1 family [Clostridium difficile
70-100-2010]
Length = 235
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 121/272 (44%), Gaps = 50/272 (18%)
Query: 97 ITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQ 156
I N + +LKV+ + ++ YG +IIL T++VK PLT KQ +S+ AM+ + P+
Sbjct: 4 IGNFLGLILKVIFEFVNH------YGISIILFTILVKIILLPLTIKQTKSTKAMQDIQPR 57
Query: 157 VKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLL 216
+K IQE+Y E+ E +LY A INPL+GCLP L P+ IGL+ L G+
Sbjct: 58 IKEIQEKYKNKPEKQNEEIVKLYGEAKINPLSGCLPLLIQFPILIGLFSVLREPVAHGVF 117
Query: 217 TE---------GFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPV 267
GF WI SL P + A +G+
Sbjct: 118 ANKAAFLAADNGFLWIKSLTSPDYVLAVFSGA---------------------------- 149
Query: 268 LLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLST 327
S Y+ K++ +MK +T + M Y+ P+GL+LYW +NL S
Sbjct: 150 ----SAYVMQKVMTPKDQLQGSMK---VMTYVMAGMSFYWGFIFPAGLTLYWTVSNLFSI 202
Query: 328 AQQVWLQKFGGAKDPMKQFSDIIKDERLDINK 359
AQ + AK + + +++ INK
Sbjct: 203 AQYYLIMNPLKAKLAANSKEEKVNEKKPKINK 234
>gi|449136196|ref|ZP_21771589.1| 60 kDa inner membrane insertion protein [Rhodopirellula europaea
6C]
gi|448885096|gb|EMB15555.1| 60 kDa inner membrane insertion protein [Rhodopirellula europaea
6C]
Length = 822
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 116/219 (52%), Gaps = 14/219 (6%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
Y AI+LLT+ V+ FPL++K ++ M+ LAP++K I E++ D E L +
Sbjct: 532 YALAIVLLTLCVRGLMFPLSRKAAINAQRMQELAPELKKIAEKHKDDMEARVRAQRELQQ 591
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF----WIPSLAGPTTIAARQ 236
G NP+AGC P +P++IGLYR LS D L F W +LA P +
Sbjct: 592 RVGFNPMAGCAPMFLQLPIFIGLYRTLS--VDIELRQAAFASWTTWASNLAAPDMMYYWG 649
Query: 237 NGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
+ W++ ++ G GW + + +LP ++VVS +++ + + D +Q +
Sbjct: 650 D-----WMWDYLGGR-GTGWLGPY-FNILP-MIVVSLFLAQQKMFMPPATDEQTAMTQKM 701
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
N++ L++G F VP+GL +Y+ T++L +++ ++K
Sbjct: 702 MNYMTLVMGLFFFRVPAGLCIYFITSSLWGIGERILVKK 740
>gi|146284522|ref|YP_001174675.1| putative inner membrane protein translocase component YidC
[Pseudomonas stutzeri A1501]
gi|339496291|ref|YP_004716584.1| putative inner membrane protein translocase component YidC
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|166977401|sp|A4VS82.1|YIDC_PSEU5 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|145572727|gb|ABP81833.1| inner membrane protein, 60 kDa [Pseudomonas stutzeri A1501]
gi|338803663|gb|AEJ07495.1| putative inner membrane protein translocase component YidC
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 556
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 112/222 (50%), Gaps = 38/222 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++II+LT+++K A FPL+ S MR+++P+++A++E++ D++++ LYK
Sbjct: 369 WGWSIIVLTIVIKLAFFPLSAASYRSMARMRAVSPKMQALKEQFGDDRQKMSQAMMELYK 428
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L +PV++ LY L ++ RQ
Sbjct: 429 KEKINPLGGCLPILVQMPVFLALYWVLLE---------------------SVEMRQA--- 464
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+F D L D Y +LP+++ V+ +I Q N P + L
Sbjct: 465 -PWMFWITD----LSIKD--PYFILPIIMGVTMFI-----QQQLNPTPPDPMQARVMKLL 512
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL--QKFGGAK 340
P++ +F L P+GL LYW NN+LS AQQ ++ Q GAK
Sbjct: 513 PIIFTFFFLWFPAGLVLYWVVNNILSIAQQWYITRQIEAGAK 554
>gi|158425677|ref|YP_001526969.1| inner membrane protein translocase component YidC [Azorhizobium
caulinodans ORS 571]
gi|158332566|dbj|BAF90051.1| 60 kDa inner membrane protein [Azorhizobium caulinodans ORS 571]
Length = 607
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 113/223 (50%), Gaps = 17/223 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+++TV++K FPL K S M++L P++ AI+ERYA D+ + Q T LYK
Sbjct: 380 FGVAILIVTVLLKGIFFPLANKSYASMAKMKALQPEMMAIRERYADDKVKQQQATMELYK 439
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INP+AGCLP L IPV+ LY+ L V E F WI L+ P
Sbjct: 440 KEKINPVAGCLPILIQIPVFFALYKVLF-VTIEMRQAPFFGWIHDLSAPDPTTVFNLFGL 498
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQALT 297
I W V P LG YL+L P+++ V+ ++ +K+ N P + +
Sbjct: 499 IPWDPSVV---PVLG-----PYLMLGAWPLIMGVTMWVQMKL-----NPAPPDPTQAMIF 545
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
N++P++ + +GL +YW NN LS QQ + + G K
Sbjct: 546 NYMPIIFTFMLAHFAAGLVIYWAWNNTLSVLQQAVIMRRNGVK 588
>gi|383637349|ref|ZP_09950755.1| putative inner membrane protein translocase component YidC
[Streptomyces chartreusis NRRL 12338]
Length = 424
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 118/226 (52%), Gaps = 18/226 (7%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L ++++ PL KQ++++ AM++L P++K IQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDKQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNG 238
YK G NPL+ CLP LA P + LY L+++A T G L A + +
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLNSIASND--TIGVINTSLLES----AQKAHI 149
Query: 239 SGISWLFPFVDGHP---PLGWSDTFAYLVLPVLLVV---SQYISVKIIQSSQNND----- 287
G F D LG S T +V +++V+ SQ+ + + + ++N D
Sbjct: 150 VGAPLAVKFTDSASKVEALGASLTDVRVVTAIMIVLMSASQFFTQRQLM-TKNVDTTVKT 208
Query: 288 PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P+M F ++ P G+ +YW T N+ + QQ+++
Sbjct: 209 PFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTMGQQMYV 254
>gi|315122061|ref|YP_004062550.1| inner membrane protein translocase component YidC [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313495463|gb|ADR52062.1| putative inner membrane protein translocase component YidC
[Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 578
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 118/221 (53%), Gaps = 18/221 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYA-GDQERIQLETARLY 179
+G AI+L T+ VKA FPL KKQ S+ M+++ P++ A++E++ + +Q E +LY
Sbjct: 357 FGIAIMLTTIFVKALFFPLAKKQYVSTANMKNIQPKIDALREKFKQASPQVLQKEMLQLY 416
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
K INPLAGC P L IPV+ +Y+ +S ++ E F WI LA P + +
Sbjct: 417 KTHKINPLAGCWPILLQIPVFFAIYKVIS-ISLEMRHAPFFGWIQDLAAP-------DPT 468
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
I LF G P + + P+++ +S ++ +K+ + P K + N+
Sbjct: 469 NIFTLF----GILPFQLPEFIHVGIWPIIMSLSMFLQLKM-----SPPPTDKGQAIVLNW 519
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+P++ + S P+GL +YW +N++S QQ + K GAK
Sbjct: 520 MPVVFVFALSSFPAGLIIYWSWSNIISIIQQTVIMKMYGAK 560
>gi|417303408|ref|ZP_12090466.1| 60 kDa inner membrane insertion protein [Rhodopirellula baltica
WH47]
gi|327540380|gb|EGF26966.1| 60 kDa inner membrane insertion protein [Rhodopirellula baltica
WH47]
Length = 822
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 116/219 (52%), Gaps = 14/219 (6%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
Y AI+LLT+ V+ FPL++K ++ M+ LAP++K I E++ D E L +
Sbjct: 532 YALAIVLLTLCVRGLMFPLSRKAAINAQRMQELAPELKKIAEKHKDDMEARVRAQRELQQ 591
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF----FWIPSLAGPTTIAARQ 236
G NP+AGC P +P++IGLYR LS D L F W +LA P +
Sbjct: 592 RVGFNPMAGCAPMFLQLPIFIGLYRTLS--VDIELRQAAFASWTAWASNLAAPDMMYYWG 649
Query: 237 NGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
+ W++ ++ G GW + + +LP ++VVS +++ + + D +Q +
Sbjct: 650 D-----WMWDYLGGR-GTGWLGPY-FNILP-MIVVSLFLAQQKMFMPPATDEQTAMTQKM 701
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
N++ L++G F VP+GL +Y+ T++L +++ ++K
Sbjct: 702 MNYMTLVMGLFFFRVPAGLCIYFITSSLWGIGERILVKK 740
>gi|344173153|emb|CCA88290.1| cytoplasmic insertase, essential for proper integration of ATPase
into the membrane [Ralstonia syzygii R24]
Length = 554
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 124/282 (43%), Gaps = 54/282 (19%)
Query: 63 LGVAERLLFTLADAAVSSSDAVTTTKQNSDWLSGITNVMETV---------LKVLKDGMS 113
+G+ E L A +S++ + Q L GIT +E V K L +
Sbjct: 296 IGIQEPLGTVAPGANISATARLFAGPQEERMLEGITPGLELVKDYGWLTIIAKPLFWLLE 355
Query: 114 TLHVPYA-YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQ 172
+H+ +G++I+ LTV+VK FPL+ S M+ L P++ AI+ER+ GD +++
Sbjct: 356 KIHLLLGNWGWSIVGLTVLVKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHKGDPQKMN 415
Query: 173 LETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTI 232
E +LY+ +NPL GCLP + IPV+I LY L + +
Sbjct: 416 QEMMQLYRTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVE-------------------- 455
Query: 233 AARQNGSGISWLFPFVDGHPPLGWSDTFA----YLVLPVLLVVSQYISVKIIQSSQNNDP 288
+ G P LGW A + +LP+L+ VS + +Q+ N P
Sbjct: 456 ---------------MRGAPWLGWVHDLASPDPFYILPILMAVSMF-----VQTRLNPTP 495
Query: 289 NMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+ F+P+ P+GL LYW NN LS AQQ
Sbjct: 496 PDPVQAKMMMFMPIAFSVMFFFFPAGLVLYWVVNNCLSIAQQ 537
>gi|386022938|ref|YP_005940963.1| putative inner membrane protein translocase component YidC
[Pseudomonas stutzeri DSM 4166]
gi|327482911|gb|AEA86221.1| putative inner membrane protein translocase component YidC
[Pseudomonas stutzeri DSM 4166]
Length = 556
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 109/215 (50%), Gaps = 36/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++II+LT+++K A FPL+ S MR+++P+++A++E++ D++++ LYK
Sbjct: 369 WGWSIIVLTIVIKLAFFPLSAASYRSMARMRAVSPKMQALKEQFGDDRQKMSQAMMELYK 428
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L +PV++ LY L ++ RQ
Sbjct: 429 KEKINPLGGCLPILVQMPVFLALYWVLLE---------------------SVEMRQA--- 464
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+F D L D Y +LP+++ V+ +I Q N P + L
Sbjct: 465 -PWMFWITD----LSIKD--PYFILPIIMGVTMFI-----QQQLNPTPPDPMQARVMKLL 512
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++ +F L P+GL LYW NN+LS AQQ ++ +
Sbjct: 513 PIIFTFFFLWFPAGLVLYWVVNNILSIAQQWYITR 547
>gi|261380787|ref|ZP_05985360.1| membrane protein insertase, YidC/Oxa1 family [Neisseria subflava
NJ9703]
gi|284796252|gb|EFC51599.1| membrane protein insertase, YidC/Oxa1 family [Neisseria subflava
NJ9703]
Length = 548
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 102/215 (47%), Gaps = 46/215 (21%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII+LT+IVKA +PLT S MR+ AP+++AI+E+Y D+ Q +LYK
Sbjct: 357 WGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDRMAQQQAMMQLYK 416
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY AL ++ RQ
Sbjct: 417 DEKINPLGGCLPMLLQIPVFIGLYWALF---------------------ASVELRQA--- 452
Query: 241 ISWLFPFVDGHPPLGWSDTFA----YLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQA- 295
P LGW + + +LP ++ + + + N P+ QA
Sbjct: 453 -----------PWLGWITDLSRPDPFYILPFIMAATMFAQTYL------NPPSTDPMQAK 495
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+ +PL+ P+GL LYW NNLL+ AQQ
Sbjct: 496 MMKVMPLIFSIMFFFFPAGLVLYWVVNNLLTIAQQ 530
>gi|344168577|emb|CCA80871.1| cytoplasmic insertase, essential for proper integration of ATPase
into the membrane [blood disease bacterium R229]
Length = 554
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 124/282 (43%), Gaps = 54/282 (19%)
Query: 63 LGVAERLLFTLADAAVSSSDAVTTTKQNSDWLSGITNVMETV---------LKVLKDGMS 113
+G+ E L A +S++ + Q L GIT +E V K L +
Sbjct: 296 IGIQEPLGTVAPGANISATARLFAGPQEERMLEGITPGLELVKDYGWLTIIAKPLFWLLE 355
Query: 114 TLHVPYA-YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQ 172
+H+ +G++I+ LTV+VK FPL+ S M+ L P++ AI+ER+ GD +++
Sbjct: 356 KIHLLLGNWGWSIVGLTVLVKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHKGDPQKMN 415
Query: 173 LETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTI 232
E +LY+ +NPL GCLP + IPV+I LY L + +
Sbjct: 416 QEMMQLYRTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVE-------------------- 455
Query: 233 AARQNGSGISWLFPFVDGHPPLGWSDTFA----YLVLPVLLVVSQYISVKIIQSSQNNDP 288
+ G P LGW A + +LP+L+ VS + +Q+ N P
Sbjct: 456 ---------------MRGAPWLGWVHDLASPDPFYILPILMAVSMF-----VQTRLNPTP 495
Query: 289 NMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+ F+P+ P+GL LYW NN LS AQQ
Sbjct: 496 PDPVQAKMMMFMPIAFSVMFFFFPAGLVLYWVVNNCLSIAQQ 537
>gi|254672457|emb|CBA05875.1| 60kDa inner-membrane protein [Neisseria meningitidis alpha275]
Length = 298
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 102/214 (47%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI++LT+IVKA +PLT S MR+ AP+++AI+E+Y D+ Q +LYK
Sbjct: 107 WGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDRMAQQQAMMQLYK 166
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY AL ++ RQ
Sbjct: 167 DEKINPLGGCLPMLLQIPVFIGLYWALF---------------------ASVELRQ---- 201
Query: 241 ISWLFPFVDGHPPLGW----SDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P LGW S + Y +LP+++ + + Q+ N P +
Sbjct: 202 ----------APWLGWITDLSRSDPYYILPIIMAATMF-----AQTYLNPPPTDPMQAKM 246
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ P+GL LYW NNLL+ AQQ
Sbjct: 247 MKIMPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQ 280
>gi|441142562|ref|ZP_20962430.1| inner membrane protein translocase component YidC [Streptomyces
rimosus subsp. rimosus ATCC 10970]
gi|440622507|gb|ELQ85286.1| inner membrane protein translocase component YidC [Streptomyces
rimosus subsp. rimosus ATCC 10970]
Length = 395
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 155/322 (48%), Gaps = 48/322 (14%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
A+G +I+ L V+++ PL KQ++S+ M++L P++KAIQERY D++R E +LY
Sbjct: 34 AWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQALQPKMKAIQERYKSDKQRQSEEMMKLY 93
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADE---GLLTEGFFWIPSLAGPTTIAARQ 236
K G NPL+ CLP LA P +I LY+ LS++A+ G++ + A +
Sbjct: 94 KETGTNPLSSCLPILAQSPFFISLYQVLSHIANNQTVGVINQSLL---------ESAQKA 144
Query: 237 NGSGISWLFPFVDGHPP---LGWSDT---FAYLVLPVLLVVSQYISVKIIQSSQNND--- 287
+ G F+D LG S T +++ VL+ SQ+ + + + ++N D
Sbjct: 145 HIFGAPLAAKFLDTPEKIQSLGASVTDVRVVTVIMIVLMSASQFYTQRQLM-TKNVDLTV 203
Query: 288 --PNMKSSQALTNFLPLMIGYFALSVPS---GLSLYWFTNNLLSTAQQVWLQKFGGAKDP 342
P M+ + L P+M F + P G+ LYW T N+ + QQ+++ + ++P
Sbjct: 204 KTPFMQQQKMLMYVFPVMFAVFGIGFPGFPVGVLLYWLTTNVWTMGQQMFVIR----RNP 259
Query: 343 M---KQFSDIIKDERLDIN---KSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEA 396
K F + + ERL K P +K A +A + + P+ R+ ++
Sbjct: 260 TPGSKAFQE--RQERLRAKGKLKEDPAEVEARKAAEEARQ-NRQQPK--------RQSKS 308
Query: 397 RRRQQREEEKRKAAEAAAKGNQ 418
RR+ Q K+ A G Q
Sbjct: 309 RRQTQPTTGKQTGGRPAGGGQQ 330
>gi|289770501|ref|ZP_06529879.1| membrane protein oxaA [Streptomyces lividans TK24]
gi|289700700|gb|EFD68129.1| membrane protein oxaA [Streptomyces lividans TK24]
Length = 431
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 118/226 (52%), Gaps = 18/226 (7%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L ++++ PL KQ++++ M++L P++K IQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRGMQTLQPEMKKIQERYKNDKQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNG 238
YK G NPL+ CLP LA P + LY L+ +A T G P L A + +
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLNGIASGD--TIGKINQPLLES----AQKAHI 149
Query: 239 SGISWLFPFVDGHPP---LGWSDTFAYLVLPVLLVV---SQYISVKIIQSSQNND----- 287
G F DG LG S T ++ V++V+ SQ+ + + + ++N D
Sbjct: 150 FGAPLAAKFTDGASKVESLGASLTDVRVITAVMIVLMSASQFFTQRQLM-TKNVDTSVKT 208
Query: 288 PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P+M F ++ P G+ +YW T N+ + QQ+++
Sbjct: 209 PFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTMGQQMYV 254
>gi|21222290|ref|NP_628069.1| inner membrane protein translocase component YidC [Streptomyces
coelicolor A3(2)]
gi|38502851|sp|O54569.1|YIDC_STRCO RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|6539748|gb|AAF16008.1|AF187159_8 Orf431 [Streptomyces coelicolor A3(2)]
gi|2898107|gb|AAC03487.1| inner membrane protein [Streptomyces coelicolor A3(2)]
gi|4808379|emb|CAB42700.1| putative membrane protein [Streptomyces coelicolor A3(2)]
Length = 431
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 118/226 (52%), Gaps = 18/226 (7%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L ++++ PL KQ++++ M++L P++K IQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRGMQTLQPEMKKIQERYKNDKQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNG 238
YK G NPL+ CLP LA P + LY L+ +A T G P L A + +
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLNGIASGD--TIGKINQPLLES----AQKAHI 149
Query: 239 SGISWLFPFVDGHPP---LGWSDTFAYLVLPVLLVV---SQYISVKIIQSSQNND----- 287
G F DG LG S T ++ V++V+ SQ+ + + + ++N D
Sbjct: 150 FGAPLAAKFTDGASKVESLGASLTDVRVITAVMIVLMSASQFFTQRQLM-TKNVDTSVKT 208
Query: 288 PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P+M F ++ P G+ +YW T N+ + QQ+++
Sbjct: 209 PFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTMGQQMYV 254
>gi|421610928|ref|ZP_16052093.1| 60 kDa inner membrane insertion protein [Rhodopirellula baltica
SH28]
gi|408498382|gb|EKK02876.1| 60 kDa inner membrane insertion protein [Rhodopirellula baltica
SH28]
Length = 822
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 116/219 (52%), Gaps = 14/219 (6%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
Y AI+LLT+ V+ FPL++K ++ M+ LAP++K I E++ D E L +
Sbjct: 532 YALAIVLLTLCVRGLMFPLSRKAAINAQRMQELAPELKKIAEKHKDDMEARVRAQRELQQ 591
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF----WIPSLAGPTTIAARQ 236
G NP+AGC P +P++IGLYR LS D L F W +LA P +
Sbjct: 592 RVGFNPMAGCAPMFLQLPIFIGLYRTLS--VDIELRQAAFASWTTWASNLAAPDMMYYWG 649
Query: 237 NGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
+ W++ ++ G GW + + +LP ++VVS +++ + + D +Q +
Sbjct: 650 D-----WMWDYLGGR-GTGWLGPY-FNILP-MIVVSLFLAQQKMFMPPATDEQTAMTQKM 701
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
N++ L++G F VP+GL +Y+ T++L +++ ++K
Sbjct: 702 MNYMTLVMGLFFFRVPAGLCIYFITSSLWGIGERILVKK 740
>gi|254391432|ref|ZP_05006634.1| membrane protein oxaA [Streptomyces clavuligerus ATCC 27064]
gi|197705121|gb|EDY50933.1| membrane protein oxaA [Streptomyces clavuligerus ATCC 27064]
Length = 415
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 115/229 (50%), Gaps = 24/229 (10%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L V+++ PL KQ++S M++L P++KAIQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVVLIRICLIPLFVKQIKSMRNMQALQPKMKAIQERYKNDRQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD---EGLLTEGFFWIPSLAGPTTIAAR 235
YK G NPL+ CLP LA P + LY LSN+A G++ E +AR
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYYVLSNIASGKTVGVINESLLE----------SAR 145
Query: 236 Q-NGSGISWLFPFVDGHPPLGWSDT------FAYLVLPVLLVVSQ-YISVKIIQSSQN-- 285
Q + G F+D + D V+ VL+ SQ Y +++Q + +
Sbjct: 146 QAHIFGAPLAAKFMDSEAKVASLDASLTTVRIVTAVMIVLMSASQFYTQRQLMQKNVDLS 205
Query: 286 -NDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P++ ++ P G+ +YW T N+ + QQ+++
Sbjct: 206 VKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTNVWTMGQQMYV 254
>gi|421615453|ref|ZP_16056477.1| membrane protein insertase [Pseudomonas stutzeri KOS6]
gi|409782526|gb|EKN62081.1| membrane protein insertase [Pseudomonas stutzeri KOS6]
Length = 556
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 110/215 (51%), Gaps = 36/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++II+LT+++K A FPL+ +S MR+++P+++A++E++ D++++ LYK
Sbjct: 369 WGWSIIVLTIVIKLAFFPLSAASYKSMARMRAVSPKMQALKEQHGDDRQKMSQAMMELYK 428
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L +PV++ LY L ++ RQ
Sbjct: 429 KEKINPLGGCLPILVQMPVFLALYWVLLE---------------------SVEMRQA--- 464
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+F D L D F +LP+++ V+ +I Q N P + L
Sbjct: 465 -PWMFWITD----LSIKDPF--FILPIIMGVTMFI-----QQQLNPTPPDPMQARVMKLL 512
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++ +F L P+GL LYW NN+LS AQQ ++ +
Sbjct: 513 PIIFTFFFLWFPAGLVLYWVVNNVLSIAQQWYITR 547
>gi|32475265|ref|NP_868259.1| hypothetical protein RB8240 [Rhodopirellula baltica SH 1]
gi|38502913|sp|Q7UFZ2.1|YIDC_RHOBA RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|32445806|emb|CAD78537.1| 60 kDa inner-membrane protein homolog-putative part of a protein
secretion system [Rhodopirellula baltica SH 1]
Length = 827
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 116/219 (52%), Gaps = 14/219 (6%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
Y AI+LLT+ V+ FPL++K ++ M+ LAP++K I E++ D E L +
Sbjct: 537 YALAIVLLTLCVRGLMFPLSRKAAINAQRMQELAPELKKIAEKHKDDMEARVRAQRELQQ 596
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF----WIPSLAGPTTIAARQ 236
G NP+AGC P +P++IGLYR LS D L F W +LA P +
Sbjct: 597 RVGFNPMAGCAPMFLQLPIFIGLYRTLS--VDIELRQAAFASWTTWASNLAAPDMMYYWG 654
Query: 237 NGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
+ W++ ++ G GW + + +LP ++VVS +++ + + D +Q +
Sbjct: 655 D-----WMWDYLGGR-GTGWLGPY-FNILP-MIVVSLFLAQQKMFMPPATDEQTAMTQKM 706
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
N++ L++G F VP+GL +Y+ T++L +++ ++K
Sbjct: 707 MNYMTLVMGLFFFRVPAGLCIYFITSSLWGIGERILVKK 745
>gi|291278771|ref|YP_003495606.1| preprotein translocase YidC subunit [Deferribacter desulfuricans
SSM1]
gi|290753473|dbj|BAI79850.1| preprotein translocase YidC subunit [Deferribacter desulfuricans
SSM1]
Length = 504
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 120/236 (50%), Gaps = 47/236 (19%)
Query: 104 VLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQER 163
+L +L S LH YG AIILLT+I+K T+PLT K + S M+ + P+++ I+E+
Sbjct: 309 MLLLLNMFYSFLH---NYGVAIILLTIIIKIVTYPLTLKSMTSMKKMQLIQPEIQKIREK 365
Query: 164 YAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWI 223
+ GD +++ LYK G+NP+ GCLP L IP++ LY+AL V+ E
Sbjct: 366 FKGDPQKMNAAMMELYKKYGVNPMGGCLPMLIQIPIFFALYKALL-VSIE---------- 414
Query: 224 PSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFA----YLVLPVLLVVSQYISVKI 279
+ G P GW + Y + P+L+ ++ +I K+
Sbjct: 415 ------------------------LKGSPFFGWITDLSMKDPYYITPILMGITMFIQQKM 450
Query: 280 IQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+ Q DP + Q L F+P++ + L+ PSGL +YW TNN+L+ QQ ++ K
Sbjct: 451 --TPQAGDP---TQQKLFMFMPIIFTFLFLNFPSGLVIYWLTNNILTIIQQYFINK 501
>gi|297171723|gb|ADI22715.1| preprotein translocase subunit YidC [uncultured verrucomicrobium
HF0500_27H16]
Length = 653
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 109/212 (51%), Gaps = 18/212 (8%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+ +G+AII++T+++K +PLT K S M+++ P +K IQ +Y +++Q E A+L
Sbjct: 436 HNWGWAIIIMTILIKLLFWPLTAKSASSMKRMQTIQPLMKEIQAKYKDKPQKMQQEVAKL 495
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNG 238
++ +NP AGCLP L +P+++GL+ L + A+ L FFW+ L+ P
Sbjct: 496 FRENKVNPAAGCLPILIQMPIFLGLFFMLRSAAE--LRFAEFFWVSDLSQPER------- 546
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTN 298
+F + P LG + +LP+L+ ++ + +++ D K +
Sbjct: 547 -----MFHWGVQIPILGEY----FNLLPILMGITMFYQMRMTPIPPGADDMQKMQAKMFR 597
Query: 299 FLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
FLP + + SGL LYW N+LS QQ
Sbjct: 598 FLPFIFLFMLYGFSSGLVLYWTVQNILSIVQQ 629
>gi|254293247|ref|YP_003059270.1| hypothetical protein Hbal_0879 [Hirschia baltica ATCC 49814]
gi|254041778|gb|ACT58573.1| 60 kDa inner membrane insertion protein [Hirschia baltica ATCC
49814]
Length = 600
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 116/232 (50%), Gaps = 17/232 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+ LTVIVK A FP+ K S MR L PQ++ I++++A D+ER Q ET LYK
Sbjct: 374 FGLAILALTVIVKLAFFPIQNKAYASMAKMRKLMPQMEEIKKKWADDKERQQKETMELYK 433
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGS 239
NP +GCLP + + V+ GLY+ L + + E FF WI L+ P +
Sbjct: 434 REKANPFSGCLPLIPQMFVFYGLYKTLFVTLE--MRHEPFFGWIKDLSAPDPTSFLNLFG 491
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
+ PF PL + VLP+L + ++ + N P + + + F
Sbjct: 492 AL----PFDPSSLPL--IGALSIGVLPILYGFTMWLLQNL-----NAPPPDPTQRMMMQF 540
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIK 351
LP++ + +GL +YW +N+LS AQQ ++ + G + QF IK
Sbjct: 541 LPIVFTFIFAGFAAGLVIYWTWSNILSIAQQYYIMRKNGVE---TQFDKFIK 589
>gi|345000864|ref|YP_004803718.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces sp.
SirexAA-E]
gi|344316490|gb|AEN11178.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces sp.
SirexAA-E]
Length = 423
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 118/227 (51%), Gaps = 20/227 (8%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L V+++ PL KQ++S+ M+ L P++KAIQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQVLQPKMKAIQERYKNDKQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ-N 237
YK G NPL+ CLP LA P + LY LS +A I + P +ARQ +
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLSAIASGKT-------IGVIDQPLLDSARQAH 148
Query: 238 GSGISWLFPFVDGH---PPLGWSDTFAYLVLPVLLVV---SQYISVKIIQSSQNND---- 287
G F+D LG S T +V +++V+ SQ+ + + + ++N D
Sbjct: 149 IFGAPLAAKFMDSDDKVAALGASLTDVRVVTAIMIVMMSASQFFTQRQLM-TKNVDLTVK 207
Query: 288 -PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L PL+ ++ P G+ +YW T N+ + QQ+++
Sbjct: 208 TPYMQQQKMLMYIFPLIFAVMGINFPVGVLVYWLTTNVWTMGQQMYV 254
>gi|261250645|ref|ZP_05943220.1| OxaI/YidC membrane insertion protein [Vibrio orientalis CIP 102891
= ATCC 33934]
gi|417954331|ref|ZP_12597368.1| membrane protein insertase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|260939214|gb|EEX95201.1| OxaI/YidC membrane insertion protein [Vibrio orientalis CIP 102891
= ATCC 33934]
gi|342815599|gb|EGU50514.1| membrane protein insertase [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 541
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 117/244 (47%), Gaps = 43/244 (17%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
WL I + T+L ++ + +G AII LT IV+ A +PLTK Q S MR
Sbjct: 329 WLWFIAKPLHTLLSFIQSFVGN------WGVAIICLTFIVRGAMYPLTKAQYTSMAKMRM 382
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+++A++ER D++R+ E LYK +NPL GCLP + +P++I LY AL +
Sbjct: 383 LQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLVLQMPIFIALYWALMESVE 442
Query: 213 EGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVV 271
L FF WI L+ Y +LP+L+
Sbjct: 443 --LRHSPFFGWIHDLSAQD------------------------------PYYILPLLMGA 470
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
S ++ ++ + + DP Q + F+P+M +F L PSGL LYW +N+++ QQ
Sbjct: 471 SMFL-IQKMSPTTVTDP---MQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQT 526
Query: 332 WLQK 335
+ K
Sbjct: 527 LIYK 530
>gi|308071641|ref|YP_003873246.1| membrane protein oxaA 1 [Paenibacillus polymyxa E681]
gi|305860920|gb|ADM72708.1| Membrane protein oxaA 1 precursor [Paenibacillus polymyxa E681]
Length = 288
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 34/215 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG A+++L +IV+ PLT KQV SS AM+++ PQ+K IQ +Y E++Q ET +L++
Sbjct: 69 YGLAVLILVIIVRTIILPLTLKQVRSSKAMQAIQPQLKEIQAKYKDTPEKVQQETMKLFQ 128
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+AGCLP + +P++I LY A+ + L F W+ L P +
Sbjct: 129 ENKVNPMAGCLPLVVQMPIFIALYNAI--YYNSALRDHDFLWL-QLGKPDHL-------- 177
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+LP+L ++ ++ ++ N P Q L
Sbjct: 178 ----------------------FILPILAAITTFVQTWMMM-KMNPTPQQGPMQFLLYVY 214
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++I + + + PS L LYWF +N+ + Q +L +
Sbjct: 215 PVLILFMSYNFPSALPLYWFYSNIYTIIQNYFLYR 249
>gi|262200044|ref|YP_003271253.1| YidC/Oxa1 family membrane protein insertase [Haliangium ochraceum
DSM 14365]
gi|262083391|gb|ACY19360.1| membrane protein insertase, YidC/Oxa1 family [Haliangium ochraceum
DSM 14365]
Length = 672
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 107/219 (48%), Gaps = 46/219 (21%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+LLTV+VK P T K + S M L P+++A+Q++Y D++R Q E LY+
Sbjct: 389 WGVAIVLLTVLVKLTLLPFTTKSMRSMKQMSKLRPKIEALQKKYKDDRQRQQEEMMALYR 448
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G+NP+AGCLP L +P+W LYR L+T G +
Sbjct: 449 THGVNPVAGCLPMLLQMPIWFALYRM--------LMTAGELY------------------ 482
Query: 241 ISWLFPFVDGHPPL--GWSDTFA----YLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQ 294
H PL GW D Y +LP+LLVV ++ K + +Q + P K
Sbjct: 483 ----------HAPLVPGWIDDLTAVDPYYILPILLVVMMFLQAK-LSPTQPDSPQQK--- 528
Query: 295 ALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
+ LPL G F+ +PSGL+LY TN L+ +W+
Sbjct: 529 MMMYGLPLSFGVFSFFLPSGLTLYILTNTFLTAVHHIWI 567
>gi|307721586|ref|YP_003892726.1| YidC/Oxa1 family membrane protein insertase [Sulfurimonas
autotrophica DSM 16294]
gi|306979679|gb|ADN09714.1| membrane protein insertase, YidC/Oxa1 family [Sulfurimonas
autotrophica DSM 16294]
Length = 534
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 120/234 (51%), Gaps = 41/234 (17%)
Query: 112 MSTLHVPYA-YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQER 170
+S LH + +G+AII LT +++A +PLT K + S M+ LAP++K ++E+Y D +R
Sbjct: 327 LSWLHGIFGNWGWAIIALTALIRAVLYPLTYKGMVSMQKMKELAPKLKELKEKYKKDPQR 386
Query: 171 IQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPT 230
+ T +YK G NPL GCLP + IPV+ LYR L N +
Sbjct: 387 LNAATMEMYKKHGANPLGGCLPMILQIPVFFALYRTLLNAVE------------------ 428
Query: 231 TIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNN--DP 288
Q I W+ P Y VLP+L+ S +I ++ + NN DP
Sbjct: 429 ----LQGADWILWINDLSRMDP---------YYVLPILMGASMFIQQRM---TPNNFTDP 472
Query: 289 NMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAKD 341
+ + +LP++ +F ++ PSGL LYWFTNNL S AQQ + Q+F AKD
Sbjct: 473 ---MQEKVFKYLPVIFTFFFVTFPSGLVLYWFTNNLFSIAQQFMVNQQFKNAKD 523
>gi|154245865|ref|YP_001416823.1| putative inner membrane protein translocase component YidC
[Xanthobacter autotrophicus Py2]
gi|154159950|gb|ABS67166.1| 60 kDa inner membrane insertion protein [Xanthobacter autotrophicus
Py2]
Length = 616
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 111/223 (49%), Gaps = 17/223 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+++TV +K FPL K S M+++ P+V AI+ERYA D+ + Q LYK
Sbjct: 389 FGVAILIITVALKGLFFPLANKSYASMAKMKAVQPEVTAIRERYADDKVKQQQALMELYK 448
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INP+AGCLP + IPV+ LY+ L V E F WI L+ P
Sbjct: 449 KEKINPVAGCLPIVIQIPVFFALYKVLF-VTIEMRHAPFFGWIRDLSAPDPTTIFNLFGL 507
Query: 241 ISW---LFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALT 297
I W P + G+ LG P+++ ++ ++ +K+ N P + Q +
Sbjct: 508 IPWDPSSVPVLGGYLMLG--------AWPIIMGITMWVQMKL-----NPAPPDPTQQMIF 554
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
N++P++ + +GL +YW NN LS +QQ + K G K
Sbjct: 555 NWMPIIFTFMLAHFAAGLVIYWAWNNTLSVSQQAMIMKRNGVK 597
>gi|419955893|ref|ZP_14472013.1| membrane protein insertase [Pseudomonas stutzeri TS44]
gi|387967313|gb|EIK51618.1| membrane protein insertase [Pseudomonas stutzeri TS44]
Length = 555
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 110/215 (51%), Gaps = 36/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++II+LT+I+K A FPL+ +S MR+++P+++A++E++ D++++ LYK
Sbjct: 369 WGWSIIVLTIIIKLAFFPLSAASYKSMARMRAVSPKMQALKEQHGDDRQKLSQAMMELYK 428
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP + +PV++ LY L ++ RQ
Sbjct: 429 KEKINPLGGCLPIIVQMPVFLALYWVLLE---------------------SVEMRQA--- 464
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+F D L D F +LP+++ V+ +I Q N P + L
Sbjct: 465 -PWMFWITD----LSIKDPF--FILPIIMGVTMFI-----QQQLNPTPPDPMQAKVMKLL 512
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++ +F L P+GL LYW NN+LS AQQ ++ +
Sbjct: 513 PIIFTFFFLWFPAGLVLYWVVNNVLSIAQQWYITR 547
>gi|383482889|ref|YP_005391803.1| membrane protein insertase [Rickettsia montanensis str. OSU 85-930]
gi|378935243|gb|AFC73744.1| membrane protein insertase [Rickettsia montanensis str. OSU 85-930]
Length = 560
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 117/222 (52%), Gaps = 27/222 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L K S M+SL P++ I+ Y+ D+ R+ E LYK
Sbjct: 361 FGVSILIVTVIIKLLMFTLANKSYRSMKKMKSLQPEIDRIKNLYSDDKARLNQEIMALYK 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
+NP+AGCLP L IPV+ +Y+ L V E + WI L+ PTTI N
Sbjct: 421 KEKVNPVAGCLPILVQIPVFFSIYKVLY-VTIEMRQAPFYGWIKDLSAPDPTTIF---NL 476
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G L PF PP ++LV+ P+L+ ++ ++ K+ S + DP M++
Sbjct: 477 FG---LLPF---SPP-------SFLVIGAWPILMAITMFLQQKM--SPEPADP-MQAQ-- 518
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
+ F+PL+ + P GL +YW NN+LS QQ ++ KF
Sbjct: 519 VMKFMPLIFLFMFNGFPVGLLIYWSWNNILSIIQQYYINKFN 560
>gi|239946952|ref|ZP_04698705.1| inner membrane protein OxaA [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921228|gb|EER21252.1| inner membrane protein OxaA [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 560
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 119/222 (53%), Gaps = 27/222 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L K S M++L P++ I+ Y+ D+ R+ E LYK
Sbjct: 361 FGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEIMALYK 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
+NP+AGCLP L IPV+ +Y+ L V E + WI L+ PTTI N
Sbjct: 421 KEKVNPVAGCLPILVQIPVFFSIYKVLY-VTIEMRQAPFYGWIKDLSAPDPTTIF---NL 476
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G L PF+ PP ++L++ P+L+ ++ ++ K+ S + DP M++
Sbjct: 477 FG---LLPFL---PP-------SFLMIGAWPILMAITMFLQQKM--SPEPADP-MQAQ-- 518
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
+ F+PL+ + S P GL +YW NN+LS QQ ++ KF
Sbjct: 519 VMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQQYYINKFN 560
>gi|294813736|ref|ZP_06772379.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|326442157|ref|ZP_08216891.1| putative inner membrane protein translocase component YidC
[Streptomyces clavuligerus ATCC 27064]
gi|294326335|gb|EFG07978.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064]
Length = 415
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 115/229 (50%), Gaps = 24/229 (10%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L V+++ PL KQ++S M++L P++KAIQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVVLIRICLIPLFVKQIKSMRNMQALQPKMKAIQERYKNDRQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD---EGLLTEGFFWIPSLAGPTTIAAR 235
YK G NPL+ CLP LA P + LY LSN+A G++ E +AR
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYYVLSNIASGKTVGVINESLLE----------SAR 145
Query: 236 Q-NGSGISWLFPFVDGHPPLGWSDT------FAYLVLPVLLVVSQ-YISVKIIQSSQN-- 285
Q + G F+D + D V+ VL+ SQ Y +++Q + +
Sbjct: 146 QAHIFGAPLAAKFMDSEAKVASLDASLTTVRIVTAVMIVLMSASQFYTQRQLMQKNVDLS 205
Query: 286 -NDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P++ ++ P G+ +YW T N+ + QQ+++
Sbjct: 206 VKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTNVWTMGQQMYV 254
>gi|399927589|ref|ZP_10784947.1| membrane protein insertase [Myroides injenensis M09-0166]
Length = 629
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 141/296 (47%), Gaps = 54/296 (18%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG AII+LTV+V+ PLT K S M+++ P+V I E+Y D + Q ET LY
Sbjct: 380 YGIAIIVLTVLVRLLISPLTYKSYLSQAKMKAIRPEVTEINEKYKNDPMKKQQETMNLYS 439
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
AG+NP+AGC+P + IP++ L++ + D L + F W L+ ++
Sbjct: 440 KAGVNPMAGCIPAILQIPIFYSLFQFFPSAFD--LRQKSFLWADDLSSYDSVL------H 491
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII-------QSSQNNDPNM-KS 292
+ + PF H L P+L ++ +I +K+ Q Q P+M K
Sbjct: 492 LPFSIPFYGNHVSL----------FPLLASIAIFIYMKMTTGDQQMAQPQQEGMPDMGKL 541
Query: 293 SQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKD 352
+ + PLM+ +F + SGLSLY+F +N ++ ++ + I+K+
Sbjct: 542 MKVMIYISPLMMLFFFNNYASGLSLYYFISNSITIGIMYVIK------------NHIVKE 589
Query: 353 ERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRRQQREEEKRK 408
+++ ++ + TKK +P +F+++ EQ +++ +E++K K
Sbjct: 590 DKI---HAIIAENKTKK-------------KPKGRFQKMMEQAQEQQRLKEQQKNK 629
>gi|436837560|ref|YP_007322776.1| membrane protein insertase, YidC/Oxa1 family [Fibrella aestuarina
BUZ 2]
gi|384068973|emb|CCH02183.1| membrane protein insertase, YidC/Oxa1 family [Fibrella aestuarina
BUZ 2]
Length = 611
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG I+ L + VK PLT K S MR LAP+++ I+ R D + Q E +LY
Sbjct: 360 YGILIVCLVIFVKLLLTPLTYKSYVSMAKMRVLAPEIEEIKARVGDDMTKQQQEQMKLYS 419
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G++PL+GC+P LAT+P+ + L++ N+ + L + F W P L+ T A G+
Sbjct: 420 EVGVSPLSGCIPVLATMPILLALFQLFPNLIE--LRQKAFLWAPDLS--TYDAFINLGTN 475
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I PFV H L V++ S + P + +AL+
Sbjct: 476 I----PFVGNHISL----------FTVMMTASSIAYAYYNNQTTPQQPGPVNMKALSYIF 521
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKF 336
PLM + S P+GL+ Y+F +N+++ AQQ+ ++ F
Sbjct: 522 PLMFMFVLNSFPAGLTWYYFVSNVVTIAQQLLIRNF 557
>gi|306846225|ref|ZP_07478787.1| inner membrane protein translocase component YidC [Brucella
inopinata BO1]
gi|306273476|gb|EFM55337.1| inner membrane protein translocase component YidC [Brucella
inopinata BO1]
Length = 610
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+++TV++KA FPL K +S M+ + P++ I+E+YA D+ + Q LYK
Sbjct: 388 FGVAILVVTVLLKALFFPLANKSYKSMARMKLMQPKMTEIREKYADDKMKQQQAMMELYK 447
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPLAGC P L IPV+ LY+ L V E F WI LA P + N G
Sbjct: 448 REKINPLAGCWPVLVQIPVFFALYKVLY-VTIEMRHAPFFGWIQDLAAPDPTSIF-NLFG 505
Query: 241 ISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
L P+ H F + V P+++ ++ ++ +++ N P + A+ +
Sbjct: 506 ---LLPYTVPH--------FLMIGVWPIIMGITMFLQMRM-----NPTPPDPTQAAIFTW 549
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+P++ + S P+GL +YW NN LS QQ + K G K
Sbjct: 550 MPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVK 590
>gi|295134749|ref|YP_003585425.1| inner hypothetical protein translocase component YidC [Zunongwangia
profunda SM-A87]
gi|294982764|gb|ADF53229.1| putative inner membrane protein translocase component YidC
[Zunongwangia profunda SM-A87]
Length = 621
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 136/284 (47%), Gaps = 41/284 (14%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YG AII++T++V+ P+T K S M+ L P++ I E+Y + + Q ET +LY
Sbjct: 376 SYGIAIIVMTIVVRIVLSPVTYKSYLSQAKMKVLRPEINEINEKYKDNAMKKQQETMKLY 435
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
AG +P++GCLP L IP++ L++ + L + F W L+ IA
Sbjct: 436 SKAGASPMSGCLPALMQIPIFYALFQFFPSAFQ--LRQKSFLWADDLSSYDVIAE----- 488
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII--QSSQ-NNDPNMKSSQAL 296
+ + PF H L P+L V+ +I +++ QS Q N P M + + L
Sbjct: 489 -LPFHIPFYGEHVSL----------FPILASVAIFIYMQMTTGQSMQANQQPGMPNMKFL 537
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDERLD 356
P+M+ +F + SGLSLY+FT+NL++ + ++ +D + ++
Sbjct: 538 MYLSPIMMLFFFNNYASGLSLYYFTSNLITIGIMLVIKHVIVDEDKIH--------AKIQ 589
Query: 357 INKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRRQ 400
NK+ P KK+ R K+ E +Q EQ+ R ++
Sbjct: 590 ANKAKP-----KKQNRFTRKMQ-------EMMEQAEEQQKRNKK 621
>gi|265985155|ref|ZP_06097890.1| inner membrane protein oxaA [Brucella sp. 83/13]
gi|306839545|ref|ZP_07472352.1| inner membrane protein translocase component YidC [Brucella sp. NF
2653]
gi|264663747|gb|EEZ34008.1| inner membrane protein oxaA [Brucella sp. 83/13]
gi|306405377|gb|EFM61649.1| inner membrane protein translocase component YidC [Brucella sp. NF
2653]
Length = 610
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+++TV++KA FPL K +S M+ + P++ I+E+YA D+ + Q LYK
Sbjct: 388 FGVAILVVTVLLKALFFPLANKSYKSMARMKLMQPKMTEIREKYADDKMKQQQAMMELYK 447
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPLAGC P L IPV+ LY+ L V E F WI LA P + N G
Sbjct: 448 REKINPLAGCWPVLVQIPVFFALYKVLY-VTIEMRHAPFFGWIQDLAAPDPTSIF-NLFG 505
Query: 241 ISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
L P+ H F + V P+++ ++ ++ +++ N P + A+ +
Sbjct: 506 ---LLPYTVPH--------FLMIGVWPIIMGITMFLQMRM-----NPTPPDPTQAAIFTW 549
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+P++ + S P+GL +YW NN LS QQ + K G K
Sbjct: 550 MPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVK 590
>gi|261217609|ref|ZP_05931890.1| inner membrane protein oxaA [Brucella ceti M13/05/1]
gi|261320486|ref|ZP_05959683.1| inner membrane protein oxaA [Brucella ceti M644/93/1]
gi|260922698|gb|EEX89266.1| inner membrane protein oxaA [Brucella ceti M13/05/1]
gi|261293176|gb|EEX96672.1| inner membrane protein oxaA [Brucella ceti M644/93/1]
Length = 609
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+++TV++KA FPL K +S M+ + P++ I+E+YA D+ + Q LYK
Sbjct: 387 FGVAILVVTVLLKALFFPLANKSYKSMARMKLMQPKMTEIREKYADDKMKQQQAMMELYK 446
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPLAGC P L IPV+ LY+ L V E F WI LA P + N G
Sbjct: 447 REKINPLAGCWPVLVQIPVFFALYKVLY-VTIEMRHAPFFGWIQDLAAPDPTSIF-NLFG 504
Query: 241 ISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
L P+ H F + V P+++ ++ ++ +++ N P + A+ +
Sbjct: 505 ---LLPYTVPH--------FLMIGVWPIIMGITMFLQMRM-----NPTPPDPTQAAIFTW 548
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+P++ + S P+GL +YW NN LS QQ + K G K
Sbjct: 549 MPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVK 589
>gi|365175443|ref|ZP_09362873.1| YidC/Oxa1 family membrane protein insertase [Synergistes sp.
3_1_syn1]
gi|363613007|gb|EHL64533.1| YidC/Oxa1 family membrane protein insertase [Synergistes sp.
3_1_syn1]
Length = 271
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 121/232 (52%), Gaps = 25/232 (10%)
Query: 117 VPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETA 176
+ ++YG AIILLT+ V+ A +PL +KQ+ S M+ + P +K IQE+YA D+E++ ET
Sbjct: 22 ITHSYGLAIILLTIAVRIALYPLNQKQMLSMQHMQKIQPMLKVIQEKYANDREKMNQETM 81
Query: 177 RLYKLAGINPLAGCLPTLATIPVWIGLYRAL--SNVADEGLLTEGFFWIPSLAGPTTIAA 234
RLYK +NP AGCLP + +P+ I L+ L + AD FF + L G +T A
Sbjct: 82 RLYKEYKVNPAAGCLPLVVQLPILILLFNVLRTYDFAD-----TAFFGV--LLGSSTTAG 134
Query: 235 ---------RQNG--SGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSS 283
NG S ++ L V P G + YL +LL+ ++ + S
Sbjct: 135 LAKAFGIAAAANGEYSIMAVLSAVVTN--PAGLAHVNFYLGNLILLISISVLTWAQQKLS 192
Query: 284 QNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
N+P M + +P + + LS+P G+ LYW ++L+ AQQ ++ K
Sbjct: 193 GGNNPQMA---MMNTIMPFFMAFICLSMPGGVMLYWGLSSLIGVAQQYFVMK 241
>gi|62317852|ref|YP_223705.1| inner membrane protein translocase component YidC [Brucella abortus
bv. 1 str. 9-941]
gi|83269831|ref|YP_419122.1| putative inner membrane protein translocase component YidC
[Brucella melitensis biovar Abortus 2308]
gi|163845137|ref|YP_001622792.1| putative inner membrane protein translocase component YidC
[Brucella suis ATCC 23445]
gi|189023102|ref|YP_001932843.1| putative inner membrane protein translocase component YidC
[Brucella abortus S19]
gi|225629472|ref|ZP_03787505.1| Inner membrane protein oxaA [Brucella ceti str. Cudo]
gi|237817392|ref|ZP_04596384.1| Inner membrane protein oxaA [Brucella abortus str. 2308 A]
gi|256015782|ref|YP_003105791.1| putative inner membrane protein translocase component YidC
[Brucella microti CCM 4915]
gi|260545087|ref|ZP_05820908.1| inner membrane protein [Brucella abortus NCTC 8038]
gi|260756233|ref|ZP_05868581.1| inner membrane protein oxaA [Brucella abortus bv. 6 str. 870]
gi|260760398|ref|ZP_05872746.1| inner membrane protein oxaA [Brucella abortus bv. 4 str. 292]
gi|260763638|ref|ZP_05875970.1| inner membrane protein oxaA [Brucella abortus bv. 2 str. 86/8/59]
gi|260882057|ref|ZP_05893671.1| inner membrane protein oxaA [Brucella abortus bv. 9 str. C68]
gi|261216465|ref|ZP_05930746.1| inner membrane protein oxaA [Brucella abortus bv. 3 str. Tulya]
gi|261220833|ref|ZP_05935114.1| inner membrane protein oxaA [Brucella ceti B1/94]
gi|261312924|ref|ZP_05952121.1| inner membrane protein oxaA [Brucella pinnipedialis M163/99/10]
gi|261318319|ref|ZP_05957516.1| inner membrane protein oxaA [Brucella pinnipedialis B2/94]
gi|261322754|ref|ZP_05961951.1| inner membrane protein oxaA [Brucella neotomae 5K33]
gi|261750713|ref|ZP_05994422.1| inner membrane protein oxaA [Brucella suis bv. 5 str. 513]
gi|261757211|ref|ZP_06000920.1| inner membrane protein [Brucella sp. F5/99]
gi|265986117|ref|ZP_06098674.1| inner membrane protein oxaA [Brucella pinnipedialis M292/94/1]
gi|265992579|ref|ZP_06105136.1| inner membrane protein oxaA [Brucella melitensis bv. 3 str. Ether]
gi|265995811|ref|ZP_06108368.1| inner membrane protein oxaA [Brucella ceti M490/95/1]
gi|297249212|ref|ZP_06932913.1| preprotein translocase YidC subunit [Brucella abortus bv. 5 str.
B3196]
gi|340792785|ref|YP_004758249.1| putative inner membrane protein translocase subunit YidC [Brucella
pinnipedialis B2/94]
gi|376271521|ref|YP_005114566.1| preprotein translocase YidC subunit [Brucella abortus A13334]
gi|423168243|ref|ZP_17154945.1| inner membrane protein oxaA [Brucella abortus bv. 1 str. NI435a]
gi|423172322|ref|ZP_17158996.1| inner membrane protein oxaA [Brucella abortus bv. 1 str. NI474]
gi|423173947|ref|ZP_17160617.1| inner membrane protein oxaA [Brucella abortus bv. 1 str. NI486]
gi|423175823|ref|ZP_17162489.1| inner membrane protein oxaA [Brucella abortus bv. 1 str. NI488]
gi|423181751|ref|ZP_17168391.1| inner membrane protein oxaA [Brucella abortus bv. 1 str. NI010]
gi|423184884|ref|ZP_17171520.1| inner membrane protein oxaA [Brucella abortus bv. 1 str. NI016]
gi|423188037|ref|ZP_17174650.1| inner membrane protein oxaA [Brucella abortus bv. 1 str. NI021]
gi|423190454|ref|ZP_17177063.1| inner membrane protein oxaA [Brucella abortus bv. 1 str. NI259]
gi|62198045|gb|AAX76344.1| inner-membrane protein, 60 kDa [Brucella abortus bv. 1 str. 9-941]
gi|82940105|emb|CAJ13152.1| 60 kDa inner membrane protein [Brucella melitensis biovar Abortus
2308]
gi|163675860|gb|ABY39970.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|189021676|gb|ACD74397.1| 60 kDa inner membrane protein [Brucella abortus S19]
gi|225615968|gb|EEH13017.1| Inner membrane protein oxaA [Brucella ceti str. Cudo]
gi|237788205|gb|EEP62421.1| Inner membrane protein oxaA [Brucella abortus str. 2308 A]
gi|255998442|gb|ACU50129.1| putative inner membrane protein translocase component YidC
[Brucella microti CCM 4915]
gi|260098358|gb|EEW82232.1| inner membrane protein [Brucella abortus NCTC 8038]
gi|260670716|gb|EEX57656.1| inner membrane protein oxaA [Brucella abortus bv. 4 str. 292]
gi|260674059|gb|EEX60880.1| inner membrane protein oxaA [Brucella abortus bv. 2 str. 86/8/59]
gi|260676341|gb|EEX63162.1| inner membrane protein oxaA [Brucella abortus bv. 6 str. 870]
gi|260871585|gb|EEX78654.1| inner membrane protein oxaA [Brucella abortus bv. 9 str. C68]
gi|260918072|gb|EEX84933.1| inner membrane protein oxaA [Brucella abortus bv. 3 str. Tulya]
gi|260919417|gb|EEX86070.1| inner membrane protein oxaA [Brucella ceti B1/94]
gi|261297542|gb|EEY01039.1| inner membrane protein oxaA [Brucella pinnipedialis B2/94]
gi|261298734|gb|EEY02231.1| inner membrane protein oxaA [Brucella neotomae 5K33]
gi|261301950|gb|EEY05447.1| inner membrane protein oxaA [Brucella pinnipedialis M163/99/10]
gi|261737195|gb|EEY25191.1| inner membrane protein [Brucella sp. F5/99]
gi|261740466|gb|EEY28392.1| inner membrane protein oxaA [Brucella suis bv. 5 str. 513]
gi|262550108|gb|EEZ06269.1| inner membrane protein oxaA [Brucella ceti M490/95/1]
gi|262763449|gb|EEZ09481.1| inner membrane protein oxaA [Brucella melitensis bv. 3 str. Ether]
gi|264658314|gb|EEZ28575.1| inner membrane protein oxaA [Brucella pinnipedialis M292/94/1]
gi|297173081|gb|EFH32445.1| preprotein translocase YidC subunit [Brucella abortus bv. 5 str.
B3196]
gi|340561244|gb|AEK56481.1| putative inner membrane protein translocase subunit YidC [Brucella
pinnipedialis B2/94]
gi|363402693|gb|AEW19662.1| preprotein translocase YidC subunit [Brucella abortus A13334]
gi|374536744|gb|EHR08264.1| inner membrane protein oxaA [Brucella abortus bv. 1 str. NI474]
gi|374538736|gb|EHR10243.1| inner membrane protein oxaA [Brucella abortus bv. 1 str. NI435a]
gi|374539948|gb|EHR11450.1| inner membrane protein oxaA [Brucella abortus bv. 1 str. NI486]
gi|374546341|gb|EHR17801.1| inner membrane protein oxaA [Brucella abortus bv. 1 str. NI010]
gi|374547184|gb|EHR18643.1| inner membrane protein oxaA [Brucella abortus bv. 1 str. NI016]
gi|374554217|gb|EHR25630.1| inner membrane protein oxaA [Brucella abortus bv. 1 str. NI021]
gi|374556494|gb|EHR27899.1| inner membrane protein oxaA [Brucella abortus bv. 1 str. NI259]
gi|374556623|gb|EHR28027.1| inner membrane protein oxaA [Brucella abortus bv. 1 str. NI488]
Length = 610
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+++TV++KA FPL K +S M+ + P++ I+E+YA D+ + Q LYK
Sbjct: 388 FGVAILVVTVLLKALFFPLANKSYKSMARMKLMQPKMTEIREKYADDKMKQQQAMMELYK 447
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPLAGC P L IPV+ LY+ L V E F WI LA P + N G
Sbjct: 448 REKINPLAGCWPVLVQIPVFFALYKVLY-VTIEMRHAPFFGWIQDLAAPDPTSIF-NLFG 505
Query: 241 ISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
L P+ H F + V P+++ ++ ++ +++ N P + A+ +
Sbjct: 506 ---LLPYTVPH--------FLMIGVWPIIMGITMFLQMRM-----NPTPPDPTQAAIFTW 549
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+P++ + S P+GL +YW NN LS QQ + K G K
Sbjct: 550 MPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVK 590
>gi|374318824|ref|YP_005065322.1| Preprotein translocase subunit YidC [Rickettsia slovaca 13-B]
gi|383750717|ref|YP_005425818.1| membrane protein insertase [Rickettsia slovaca str. D-CWPP]
gi|360041372|gb|AEV91754.1| Preprotein translocase subunit YidC [Rickettsia slovaca 13-B]
gi|379773731|gb|AFD19087.1| membrane protein insertase [Rickettsia slovaca str. D-CWPP]
Length = 560
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 118/222 (53%), Gaps = 27/222 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L K S M++L P+V I+ Y+ D+ R+ E LYK
Sbjct: 361 FGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEVDRIKNLYSDDKARLNQEIMALYK 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
+NP+AGCLP L IPV+ +Y+ L V E + WI L+ PTTI N
Sbjct: 421 KEKVNPVAGCLPILVQIPVFFSIYKVLY-VTIEMRQAPFYGWIKDLSAPDPTTIF---NL 476
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G L PF PP ++L++ P+L+ ++ ++ K+ S + DP M++
Sbjct: 477 FG---LLPF---SPP-------SFLMIGAWPILMAITMFLQQKM--SPEPADP-MQAQ-- 518
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
+ F+PL+ + S P GL +YW NN+LS QQ ++ KF
Sbjct: 519 VMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQQYYINKFN 560
>gi|149176568|ref|ZP_01855181.1| hypothetical protein PM8797T_30327 [Planctomyces maris DSM 8797]
gi|148844681|gb|EDL59031.1| hypothetical protein PM8797T_30327 [Planctomyces maris DSM 8797]
Length = 707
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 149/308 (48%), Gaps = 32/308 (10%)
Query: 112 MSTLH-VPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQER 170
++TLH +YG AII LT+IV+ + +PL++KQ + M+ L PQ+ ++++Y D+E+
Sbjct: 420 LTTLHGFGLSYGIAIICLTIIVRGSLYPLSRKQAIGAQKMKELQPQIAELKKKYGDDREK 479
Query: 171 IQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPT 230
+ L+ NPLAGCLP +P++ GLY AL+N L F W+ +LA P
Sbjct: 480 LGRAQMELFSKNNYNPLAGCLPIFMQLPIFFGLYTALNNAVQ--LRGTPFLWVDNLAAPD 537
Query: 231 TIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNM 290
+ + + PF+ D F +LP+ + V ++ + + D +
Sbjct: 538 ALFQ------MPFAIPFL--------GDQFN--LLPI-VTVGLFVMQQKLFMPPPTDKDQ 580
Query: 291 KSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDII 350
+ + N++ + +G+ VP+GL +Y+ ++L ++ L F + P S I+
Sbjct: 581 ELQHKIMNYMMIGMGFMFYHVPAGLCVYFIASSLWGICERKLLD-FQSKRRP----STIV 635
Query: 351 KDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEK--FKQIREQEARRRQQREEEKRK 408
+ +V + + K+ + +K T E P +K F +++E + ++Q R+
Sbjct: 636 GSD-----PNVIDVEAKSKKTQNRKKQTDENEPPAKKGWFARLQEIADQAQEQAALNDRR 690
Query: 409 AAEAAAKG 416
+ KG
Sbjct: 691 QENSRDKG 698
>gi|23500746|ref|NP_700186.1| inner membrane protein translocase component YidC [Brucella suis
1330]
gi|376278968|ref|YP_005109001.1| putative inner membrane protein translocase component YidC
[Brucella suis VBI22]
gi|384223528|ref|YP_005614693.1| putative inner membrane protein translocase component YidC
[Brucella suis 1330]
gi|38503028|sp|Q8FV29.1|YIDC_BRUSU RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|23464400|gb|AAN34191.1| inner-membrane protein, 60 kDa [Brucella suis 1330]
gi|343384976|gb|AEM20467.1| putative inner membrane protein translocase component YidC
[Brucella suis 1330]
gi|358260406|gb|AEU08139.1| putative inner membrane protein translocase component YidC
[Brucella suis VBI22]
Length = 610
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+++TV++KA FPL K +S M+ + P++ I+E+YA D+ + Q LYK
Sbjct: 388 FGVAILVVTVLLKALFFPLANKSYKSMARMKLMQPKMTEIREKYADDKMKQQQAMMELYK 447
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPLAGC P L IPV+ LY+ L V E F WI LA P + N G
Sbjct: 448 REKINPLAGCWPVLVQIPVFFALYKVLY-VTIEMRHAPFFGWIQDLAAPDPTSIF-NLFG 505
Query: 241 ISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
L P+ H F + V P+++ ++ ++ +++ N P + A+ +
Sbjct: 506 ---LLPYTVPH--------FLMIGVWPIIMGITMFLQMRM-----NPTPPDPTQAAIFTW 549
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+P++ + S P+GL +YW NN LS QQ + K G K
Sbjct: 550 MPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVK 590
>gi|407780969|ref|ZP_11128189.1| Inner membrane insertion protein [Oceanibaculum indicum P24]
gi|407208395|gb|EKE78313.1| Inner membrane insertion protein [Oceanibaculum indicum P24]
Length = 616
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 109/226 (48%), Gaps = 22/226 (9%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+ LTV++K FPL K ++ ++ L P++ ++ER D++R+ E LYK
Sbjct: 377 FGLAILALTVVIKLLFFPLANKSYKAMSKLKELQPKMMELRERIGDDRQRLNQEMMTLYK 436
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP AGCLP L IPV+ LY+ L V E + WI L+ P + +
Sbjct: 437 KEKVNPAAGCLPILVQIPVFFALYKVLF-VTIEMRHAPFYGWIKDLSAP-------DPTT 488
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I LF + PP V P+++ VS ++ K+ N P + FL
Sbjct: 489 IFNLFGLIPWDPP----QMLMIGVWPIIMGVSMFLQQKL-----NPQPADPLQAKIFMFL 539
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ-----KFGGAKD 341
P++ S P+GL +YW NN LS AQQ + K GG KD
Sbjct: 540 PIVFTVMLASFPAGLVIYWAWNNTLSMAQQYVIMRRMGVKIGGGKD 585
>gi|294853976|ref|ZP_06794648.1| preprotein translocase YidC subunit [Brucella sp. NVSL 07-0026]
gi|294819631|gb|EFG36631.1| preprotein translocase YidC subunit [Brucella sp. NVSL 07-0026]
Length = 610
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+++TV++KA FPL K +S M+ + P++ I+E+YA D+ + Q LYK
Sbjct: 388 FGVAILVVTVLLKALFFPLANKSYKSMARMKLMQPKMTEIREKYADDKMKQQQAMMELYK 447
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPLAGC P L IPV+ LY+ L V E F WI LA P + N G
Sbjct: 448 REKINPLAGCWPVLVQIPVFFALYKVLY-VTIEMRHAPFFGWIQDLAAPDPTSIF-NLFG 505
Query: 241 ISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
L P+ H F + V P+++ ++ ++ +++ N P + A+ +
Sbjct: 506 ---LLPYTVPH--------FLMIGVWPIIMGITMFLQMRM-----NPTPPDPTQAAIFTW 549
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+P++ + S P+GL +YW NN LS QQ + K G K
Sbjct: 550 MPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVK 590
>gi|406920071|gb|EKD58200.1| hypothetical protein ACD_57C00004G0010 [uncultured bacterium]
Length = 274
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 130/263 (49%), Gaps = 30/263 (11%)
Query: 97 ITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQ 156
+T + +L L ++ +++P A GFAIILLTVIV+ +PLT Q++SS M +L P
Sbjct: 8 LTTPILNLLVALYKALNAIYLPGALGFAIILLTVIVRMILWPLTTSQLKSSQKMAALKPH 67
Query: 157 VKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLL 216
+ I+ + D+ R Q E +LYK G+NPLAGCLP L IPV+I LY L +
Sbjct: 68 LDRIKAEHGHDKVRHQQEVNKLYKEHGVNPLAGCLPLLLQIPVFIALYNVLLKIVQ---- 123
Query: 217 TEGFFWIPSLAG-----PTTIAARQNGSGISWLFPFVDGHPPLGWSDT-FAYLVLPVLLV 270
G F LAG + ++ +S+ F F P W L +P++
Sbjct: 124 VNGDF----LAGINQRLYSPFLYLESVPDVSF-FGFNLSSKPNEWQQIGILLLAIPIITG 178
Query: 271 VSQYISVKIIQSSQ--------------NNDPNMKSSQA-LTNFLPLMIGYFALSVPSGL 315
+ Q+I K++ ++ + +M + Q+ + +P+MI +F+ P GL
Sbjct: 179 LLQFIQSKMLSPAKPPVKVQPEKKEGKGELEDSMAAMQSQMILIMPVMIAFFSYGFPVGL 238
Query: 316 SLYWFTNNLLSTAQQVWLQKFGG 338
SLYW T ++ QQ + GG
Sbjct: 239 SLYWNTFTIIGIIQQYKISGPGG 261
>gi|402773364|ref|YP_006592901.1| Membrane protein OxaA [Methylocystis sp. SC2]
gi|401775384|emb|CCJ08250.1| Membrane protein OxaA [Methylocystis sp. SC2]
Length = 593
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 121/248 (48%), Gaps = 17/248 (6%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W IT M ++ L + +G AI+ +TVIVK A PL K +S M++
Sbjct: 349 WFYFITRPMFRLIDFLYKLLGN------FGLAILAVTVIVKLAFLPLANKSYQSIAKMKA 402
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
+ P++K ++E+Y D+ + +E L+K +NP +GCLP + IPV+ LY+ L V
Sbjct: 403 IQPRIKELKEKYGDDKHKFNMEQMELFKREKVNPASGCLPVIVQIPVFFSLYKVLV-VTI 461
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E F WI L+ P N + + PF H + + A V P+L+ VS
Sbjct: 462 EMRHAPFFGWIKDLSAPDP----TNVFNLFGVLPFDPTHVAI-FGPYLALGVWPLLMGVS 516
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ +K+ N +P + + + ++P++ + SGL +YW NNLLS QQ
Sbjct: 517 MWLQMKM-----NPEPADEIQKTMFAWMPVIFTFTMGGFASGLLIYWTWNNLLSIVQQGV 571
Query: 333 LQKFGGAK 340
+ K G K
Sbjct: 572 IMKRAGVK 579
>gi|148558174|ref|YP_001257934.1| putative inner membrane protein translocase component YidC
[Brucella ovis ATCC 25840]
gi|148369459|gb|ABQ62331.1| inner-membrane protein, 60 kDa [Brucella ovis ATCC 25840]
Length = 610
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+++TV++KA FPL K +S M+ + P++ I+E+YA D+ + Q LYK
Sbjct: 388 FGVAILVVTVLLKALFFPLANKSYKSMARMKLMQPKMTEIREKYADDKMKQQQAMMELYK 447
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPLAGC P L IPV+ LY+ L V E F WI LA P + N G
Sbjct: 448 REKINPLAGCWPVLVQIPVFFALYKVLY-VTIEMRHAPFFGWIQDLAAPDPTSIF-NLFG 505
Query: 241 ISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
L P+ H F + V P+++ ++ ++ +++ N P + A+ +
Sbjct: 506 ---LLPYTVPH--------FLMIGVWPIIMGITMFLQMRM-----NPTPPDPTQAAIFTW 549
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+P++ + S P+GL +YW NN LS QQ + K G K
Sbjct: 550 MPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVK 590
>gi|341583302|ref|YP_004763793.1| membrane protein insertase [Rickettsia heilongjiangensis 054]
gi|350273098|ref|YP_004884411.1| putative inner membrane protein translocase component yidC
[Rickettsia japonica YH]
gi|340807528|gb|AEK74116.1| membrane protein insertase [Rickettsia heilongjiangensis 054]
gi|348592311|dbj|BAK96272.1| putative inner membrane protein translocase component yidC
[Rickettsia japonica YH]
Length = 560
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 118/222 (53%), Gaps = 27/222 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L K S M++L P++ I+ Y+ D+ R+ E LYK
Sbjct: 361 FGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEIMALYK 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
+NP+AGCLP L IPV+ +Y+ L V E + WI L+ PTTI N
Sbjct: 421 KEKVNPVAGCLPILVQIPVFFSIYKVLY-VTIEMRQAPFYGWIKDLSAPDPTTIF---NL 476
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G L PF PP ++L++ P+L+ ++ ++ K+ S + DP M++
Sbjct: 477 FG---LLPF---SPP-------SFLMIGAWPILMAITMFLQQKM--SPEPADP-MQAQ-- 518
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
+ F+PL+ + S P GL +YW NN+LS QQ ++ KF
Sbjct: 519 VMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIVQQYYINKFN 560
>gi|161621071|ref|YP_001594957.1| putative inner membrane protein translocase component YidC
[Brucella canis ATCC 23365]
gi|260567731|ref|ZP_05838200.1| inner membrane protein oxaA [Brucella suis bv. 4 str. 40]
gi|261753969|ref|ZP_05997678.1| inner membrane protein oxaA [Brucella suis bv. 3 str. 686]
gi|376277467|ref|YP_005153528.1| inner membrane protein oxaA [Brucella canis HSK A52141]
gi|161337882|gb|ABX64186.1| Inner membrane protein oxaA [Brucella canis ATCC 23365]
gi|260154396|gb|EEW89477.1| inner membrane protein oxaA [Brucella suis bv. 4 str. 40]
gi|261743722|gb|EEY31648.1| inner membrane protein oxaA [Brucella suis bv. 3 str. 686]
gi|363405841|gb|AEW16135.1| inner membrane protein oxaA [Brucella canis HSK A52141]
Length = 610
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+++TV++KA FPL K +S M+ + P++ I+E+YA D+ + Q LYK
Sbjct: 388 FGVAILVVTVLLKALFFPLANKSYKSMARMKLMQPKMTEIREKYADDKMKQQQAMMELYK 447
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPLAGC P L IPV+ LY+ L V E F WI LA P + N G
Sbjct: 448 REKINPLAGCWPVLVQIPVFFALYKVLY-VTIEMRHAPFFGWIQDLAAPDPTSIF-NLFG 505
Query: 241 ISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
L P+ H F + V P+++ ++ ++ +++ N P + A+ +
Sbjct: 506 ---LLPYTVPH--------FLMIGVWPIIMGITMFLQMRM-----NPTPPDPTQAAIFTW 549
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+P++ + S P+GL +YW NN LS QQ + K G K
Sbjct: 550 MPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVK 590
>gi|359787961|ref|ZP_09290945.1| membrane protein insertase, partial [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359256166|gb|EHK59038.1| membrane protein insertase, partial [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 492
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+GFAI+ TV+VKA FPL K S M+ + P++ I+E+YA D+ + Q LYK
Sbjct: 271 FGFAILATTVVVKAVFFPLANKSYASMANMKKVQPKMLEIREKYADDKMKQQQAMMELYK 330
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPLAGC P L IPV+ LY+ L + E F WI LA P + N G
Sbjct: 331 TEKINPLAGCWPVLIQIPVFFALYKVLY-ITIEMRHAPFFGWIQDLAAPDPTSLF-NLFG 388
Query: 241 ISWLFPF-VDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
L PF V + +G V P+++ V+ ++ +++ N P + + +
Sbjct: 389 ---LLPFAVPEYLHIG--------VWPLIMGVTMFLQMRM-----NPTPPDPTQAMIFAW 432
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+P++ + S P+GL +YW NNLLS QQ + K GAK
Sbjct: 433 MPVVFTFMLASFPAGLVIYWAWNNLLSIIQQGAIMKRQGAK 473
>gi|294101695|ref|YP_003553553.1| YidC/Oxa1 family membrane protein insertase [Aminobacterium
colombiense DSM 12261]
gi|293616675|gb|ADE56829.1| membrane protein insertase, YidC/Oxa1 family [Aminobacterium
colombiense DSM 12261]
Length = 263
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 118/232 (50%), Gaps = 15/232 (6%)
Query: 112 MSTLH-VPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQER 170
+ TLH + ++G AIILLT+ V+ PLT KQ+ S M+ L P++K +QE+Y D+E
Sbjct: 16 LETLHNLTGSWGIAIILLTLAVRILLHPLTHKQMVSMQRMQKLQPRMKMLQEKYKDDKET 75
Query: 171 IQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPT 230
+ E LYK +NP AGCLP L +P+ I L+R L N + GF SL G
Sbjct: 76 LNREIMSLYKENKVNPAAGCLPLLVQLPILILLFRLLMNYNFGSVPFLGFI---SLEGSV 132
Query: 231 TIAARQNGS-------GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSS 283
Q + G+ + V +P G + YL +LLVV ++ Q S
Sbjct: 133 LSTLAQAVALPETTKIGVMAVLSGVLANPA-GLAQVGLYLGNLMLLVVVGILTWAQQQMS 191
Query: 284 QNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+P M ++ F+PL + + LS+P G+ LYW ++ L AQQ W+ K
Sbjct: 192 STGNPQMA---MMSWFMPLFLTFICLSLPGGVLLYWGVSSFLGVAQQWWITK 240
>gi|15603927|ref|NP_220442.1| inner membrane protein translocase component YidC [Rickettsia
prowazekii str. Madrid E]
gi|383486903|ref|YP_005404583.1| membrane protein insertase [Rickettsia prowazekii str. GvV257]
gi|383487477|ref|YP_005405156.1| membrane protein insertase [Rickettsia prowazekii str. Chernikova]
gi|383488323|ref|YP_005406001.1| membrane protein insertase [Rickettsia prowazekii str. Katsinyian]
gi|383489167|ref|YP_005406844.1| membrane protein insertase [Rickettsia prowazekii str. Dachau]
gi|383499301|ref|YP_005412662.1| membrane protein insertase [Rickettsia prowazekii str. BuV67-CWPP]
gi|383500142|ref|YP_005413502.1| membrane protein insertase [Rickettsia prowazekii str. RpGvF24]
gi|386081881|ref|YP_005998458.1| Preprotein translocase subunit YidC [Rickettsia prowazekii str.
Rp22]
gi|38503265|sp|Q9ZE97.1|YIDC_RICPR RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|3860618|emb|CAA14519.1| 60 KD INNER-MEMBRANE PROTEIN (yidC) [Rickettsia prowazekii str.
Madrid E]
gi|292571645|gb|ADE29560.1| Preprotein translocase subunit YidC [Rickettsia prowazekii str.
Rp22]
gi|380757268|gb|AFE52505.1| membrane protein insertase [Rickettsia prowazekii str. GvV257]
gi|380757839|gb|AFE53075.1| membrane protein insertase [Rickettsia prowazekii str. RpGvF24]
gi|380760356|gb|AFE48878.1| membrane protein insertase [Rickettsia prowazekii str. Chernikova]
gi|380761202|gb|AFE49723.1| membrane protein insertase [Rickettsia prowazekii str. Katsinyian]
gi|380762047|gb|AFE50567.1| membrane protein insertase [Rickettsia prowazekii str. BuV67-CWPP]
gi|380762890|gb|AFE51409.1| membrane protein insertase [Rickettsia prowazekii str. Dachau]
Length = 560
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 114/222 (51%), Gaps = 27/222 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L K S M++L P++ I+ Y D+ R+ E LYK
Sbjct: 361 FGISILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYNNDKARLNQEIMALYK 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
+NP+AGCLP L IPV+ +Y+ L V E F WI L+ PTTI N
Sbjct: 421 KEKVNPVAGCLPILVQIPVFFSIYKVLY-VTIEMRQAPFFGWIKDLSSPDPTTIF---NL 476
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G L PF PP ++L++ P+L+ ++ ++ K+ S + DP
Sbjct: 477 FG---LLPFA---PP-------SFLMIGAWPILMAITMFLHQKM--SPELADP---IQAQ 518
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
+ F+PL+ + S P GL +YW NN+LS QQ ++ KF
Sbjct: 519 VMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQQYYINKFN 560
>gi|418295063|ref|ZP_12906937.1| membrane protein insertase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379066420|gb|EHY79163.1| membrane protein insertase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 557
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 109/215 (50%), Gaps = 36/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++II+LT+++K A FPL+ S MR+++P+++A++E++ D++++ LYK
Sbjct: 370 WGWSIIVLTIVIKLAFFPLSAASYRSMARMRAVSPKMQALKEQFGDDRQKMSQAMMELYK 429
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L +PV++ LY L ++ RQ
Sbjct: 430 KEKINPLGGCLPILVQMPVFLALYWVLLE---------------------SVEMRQA--- 465
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+F D L D F +LP+++ ++ +I Q N P + L
Sbjct: 466 -PWMFWITD----LSIKDPF--FILPIIMGITMFI-----QQQLNPTPPDPMQARVMKLL 513
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++ +F L P+GL LYW NN+LS AQQ ++ +
Sbjct: 514 PIIFTFFFLWFPAGLVLYWVVNNVLSIAQQWYITR 548
>gi|422414427|ref|ZP_16491384.1| stage III sporulation protein J [Listeria innocua FSL J1-023]
gi|313625809|gb|EFR95423.1| stage III sporulation protein J [Listeria innocua FSL J1-023]
Length = 287
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 129/258 (50%), Gaps = 42/258 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGD----QERIQLETA 176
Y II++T++++ PL KQ++S AM SL P++K +QE+Y+ ++++Q ET
Sbjct: 65 YAVGIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKIKELQEKYSSKDNETKQKLQQETM 124
Query: 177 RLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ 236
RLY+ +NP+ GCLP L +P+ +G Y+A+S A+ + T+ F W+
Sbjct: 125 RLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDTFLWMQL----------- 171
Query: 237 NGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
G+P Y +LPV+ ++ ++S KI Q KS +
Sbjct: 172 -------------GNPD-------PYFILPVVAALTTFLSSKISMMGQTQQN--KSMAMI 209
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK-FGGAKDPMKQFSDIIKDERL 355
+P+MI + +++PS L+LYW N+ + Q + + F ++ + +++ERL
Sbjct: 210 VYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQLEEERL 269
Query: 356 DINKSVPGLSSTKKEARQ 373
K + ++KK ++
Sbjct: 270 --KKKAANMKASKKGGKK 285
>gi|407069490|ref|ZP_11100328.1| membrane protein insertase [Vibrio cyclitrophicus ZF14]
Length = 539
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 116/244 (47%), Gaps = 43/244 (17%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
WL I + T+L ++ + +G AII LT IV+ A +PLTK Q S MR
Sbjct: 328 WLWFIAKPLHTLLSFIQG------IVVNWGLAIICLTFIVRGAMYPLTKAQYTSMAKMRM 381
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P++ A++ER D++R+ E LYK +NPL GCLP L +P++I LY AL +
Sbjct: 382 LQPKLTAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFISLYWALMESVE 441
Query: 213 EGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVV 271
L FF WI L+ Y +LP+L+
Sbjct: 442 --LRHSPFFGWITDLSAQD------------------------------PYYILPLLMGA 469
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
S ++ ++ + + DP Q + F+P+M +F L PSGL LYW +N+++ QQ
Sbjct: 470 SMFL-IQKMSPTTVTDP---MQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQT 525
Query: 332 WLQK 335
+ +
Sbjct: 526 LIYR 529
>gi|196249190|ref|ZP_03147889.1| 60 kDa inner membrane insertion protein [Geobacillus sp. G11MC16]
gi|196211419|gb|EDY06179.1| 60 kDa inner membrane insertion protein [Geobacillus sp. G11MC16]
Length = 249
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 108/218 (49%), Gaps = 39/218 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGD----QERIQLETA 176
YG AII+LT+IV+ PL KQ +S+AM+ L P++ +QE+Y Q ++Q E
Sbjct: 55 YGIAIIVLTLIVRFCLLPLILKQFRTSIAMQKLRPELLKLQEKYKSKDPETQRKLQQEMV 114
Query: 177 RLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ 236
+LY+ GINP +GCLP L +P+++ LY A+S + + T F W+
Sbjct: 115 QLYQKHGINPASGCLPVLIQMPIFMALYYAISRTQE--IKTHSFLWV------------- 159
Query: 237 NGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
LG D Y +LP+L ++ ++S+++ S + M +
Sbjct: 160 ----------------ELGHRD--PYFILPILAALTTFLSLRL--SPSMTEEQMPQMAMM 199
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
+ +P+MI A SVPS LSLYW S Q + L+
Sbjct: 200 SYIMPVMIFIGASSVPSALSLYWVVGGCFSIIQSLMLR 237
>gi|225686778|ref|YP_002734750.1| putative inner membrane protein translocase component YidC
[Brucella melitensis ATCC 23457]
gi|256262088|ref|ZP_05464620.1| inner membrane protein [Brucella melitensis bv. 2 str. 63/9]
gi|384213537|ref|YP_005602620.1| putative inner membrane protein translocase component YidC
[Brucella melitensis M5-90]
gi|384410639|ref|YP_005599259.1| putative inner membrane protein translocase component YidC
[Brucella melitensis M28]
gi|384447136|ref|YP_005661354.1| putative inner membrane protein translocase component YidC
[Brucella melitensis NI]
gi|225642883|gb|ACO02796.1| Inner membrane protein oxaA [Brucella melitensis ATCC 23457]
gi|263091777|gb|EEZ16108.1| inner membrane protein [Brucella melitensis bv. 2 str. 63/9]
gi|326411186|gb|ADZ68250.1| putative inner membrane protein translocase component YidC
[Brucella melitensis M28]
gi|326554477|gb|ADZ89116.1| putative inner membrane protein translocase component YidC
[Brucella melitensis M5-90]
gi|349745133|gb|AEQ10675.1| putative inner membrane protein translocase component YidC
[Brucella melitensis NI]
Length = 610
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+++TV++KA FPL K +S M+ + P++ I+E+YA D+ + Q LYK
Sbjct: 388 FGVAILVVTVLLKALFFPLANKSYKSMARMKLMQPKMTEIREKYADDKMKQQQAMMELYK 447
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPLAGC P L IPV+ LY+ L V E F WI LA P + N G
Sbjct: 448 RERINPLAGCWPVLVQIPVFFALYKVLY-VTIEMRHAPFFGWIQDLAAPDPTSIF-NLFG 505
Query: 241 ISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
L P+ H F + V P+++ ++ ++ +++ N P + A+ +
Sbjct: 506 ---LLPYTVPH--------FLMIGVWPIIMGITMFLQMRM-----NPTPPDPTQAAIFTW 549
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+P++ + S P+GL +YW NN LS QQ + K G K
Sbjct: 550 MPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVK 590
>gi|448238074|ref|YP_007402132.1| transmembrane protein [Geobacillus sp. GHH01]
gi|445206916|gb|AGE22381.1| transmembrane protein [Geobacillus sp. GHH01]
Length = 249
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 108/218 (49%), Gaps = 39/218 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGD----QERIQLETA 176
YG AII+LT+IV+ PL KQ +S+AM+ L P++ +QE+Y Q ++Q E
Sbjct: 55 YGIAIIVLTLIVRFCLLPLILKQFRASIAMQKLRPELMKLQEKYKSKDPETQRKLQQEMM 114
Query: 177 RLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ 236
+LY+ G+NP +GCLP L +P+++ LY A+S + + T F W+
Sbjct: 115 QLYQKHGVNPASGCLPVLIQMPIFMALYYAISRTQE--IKTHSFLWV------------- 159
Query: 237 NGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
LG D Y +LPVL ++ +IS+++ S + M +
Sbjct: 160 ----------------ELGHRD--PYFILPVLAALTTFISLRL--SPSMAEEQMPQMAMM 199
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
+ +P+MI A SVPS LSLYW S Q + L+
Sbjct: 200 SYIMPVMIFIGASSVPSALSLYWVVGGCFSIIQSLILR 237
>gi|138895363|ref|YP_001125816.1| stage III sporulation protein J [Geobacillus thermodenitrificans
NG80-2]
gi|134266876|gb|ABO67071.1| Stage III sporulation protein J [Geobacillus thermodenitrificans
NG80-2]
Length = 249
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 108/218 (49%), Gaps = 39/218 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGD----QERIQLETA 176
YG AII+LT+IV+ PL KQ +S+AM+ L P++ +QE+Y Q ++Q E
Sbjct: 55 YGIAIIVLTLIVRFCLLPLILKQFRTSIAMQKLRPELLKLQEKYKSKDPETQRKLQQEMV 114
Query: 177 RLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ 236
+LY+ GINP +GCLP L +P+++ LY A+S + + T F W+
Sbjct: 115 QLYQKHGINPASGCLPVLIQMPIFMALYYAISRTQE--IKTHSFLWV------------- 159
Query: 237 NGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
LG D Y +LP+L ++ ++S+++ S + M +
Sbjct: 160 ----------------ELGHRD--PYFILPILAALTTFLSLRL--SPSMTEEQMPQMAMM 199
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
+ +P+MI A SVPS LSLYW S Q + L+
Sbjct: 200 SYIMPVMIFIGASSVPSALSLYWVVGGCFSIIQSLMLR 237
>gi|86147168|ref|ZP_01065484.1| putative inner membrane protein translocase component YidC [Vibrio
sp. MED222]
gi|218708091|ref|YP_002415712.1| inner membrane protein translocase component YidC [Vibrio
splendidus LGP32]
gi|254778171|sp|B7VGH7.1|YIDC_VIBSL RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|85835052|gb|EAQ53194.1| putative inner membrane protein translocase component YidC [Vibrio
sp. MED222]
gi|218321110|emb|CAV17060.1| Inner membrane protein oxaA [Vibrio splendidus LGP32]
Length = 539
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 116/244 (47%), Gaps = 43/244 (17%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
WL I + T+L ++ + +G AII LT IV+ A +PLTK Q S MR
Sbjct: 328 WLWFIAKPLHTLLSFIQG------IVVNWGLAIICLTFIVRGAMYPLTKAQYTSMAKMRM 381
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P++ A++ER D++R+ E LYK +NPL GCLP L +P++I LY AL +
Sbjct: 382 LQPKLTAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFISLYWALMESVE 441
Query: 213 EGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVV 271
L FF WI L+ Y +LP+L+
Sbjct: 442 --LRHSPFFGWITDLSAQD------------------------------PYYILPLLMGA 469
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
S ++ ++ + + DP Q + F+P+M +F L PSGL LYW +N+++ QQ
Sbjct: 470 SMFL-IQKMSPTTVTDP---MQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQT 525
Query: 332 WLQK 335
+ +
Sbjct: 526 LIYR 529
>gi|452750226|ref|ZP_21949978.1| membrane protein insertase [Pseudomonas stutzeri NF13]
gi|452005876|gb|EMD98156.1| membrane protein insertase [Pseudomonas stutzeri NF13]
Length = 556
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 113/224 (50%), Gaps = 37/224 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++II+LT+I+K A FPL+ S MR+++P+++A++E++ D++++ LYK
Sbjct: 369 WGWSIIVLTIIIKLAFFPLSAASYRSMARMRAVSPKMQALKEQHGDDRQKMSQAMMELYK 428
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L +PV++ LY L ++ RQ
Sbjct: 429 KEKINPLGGCLPILVQMPVFLALYWVLLE---------------------SVEMRQA--- 464
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+F D L D F +LP+++ ++ +I Q N P + L
Sbjct: 465 -PWMFWITD----LSIKDPF--FILPIIMGITMFI-----QQQLNPTPPDPMQARVMKLL 512
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAKDPM 343
P++ +F L P+GL LYW NN+LS AQQ ++ +K A P+
Sbjct: 513 PVIFTFFFLWFPAGLVLYWVVNNVLSIAQQWYITRKIEAAAKPV 556
>gi|15891997|ref|NP_359711.1| inner membrane protein translocase component YidC [Rickettsia
conorii str. Malish 7]
gi|38503126|sp|Q92JJ3.1|YIDC_RICCN RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|15619112|gb|AAL02612.1| 60 kD inner-membrane protein [Rickettsia conorii str. Malish 7]
Length = 560
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 118/222 (53%), Gaps = 27/222 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L K S M++L P++ I+ Y+ D+ R+ E LYK
Sbjct: 361 FGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEIMALYK 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
+NP+AGCLP L IPV+ +Y+ L V E + WI L+ PTTI N
Sbjct: 421 KEKVNPVAGCLPILVQIPVFFSIYKVLY-VTIEMRQAPFYGWIKDLSASDPTTIF---NL 476
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G L PF PP ++L++ P+L+ ++ ++ K+ S + DP M++
Sbjct: 477 FG---LLPF---SPP-------SFLMIGAWPILMAITMFLQQKM--SPEPADP-MQAQ-- 518
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
+ F+PL+ + S P GL +YW NN+LS QQ ++ KF
Sbjct: 519 VMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQQYYINKFN 560
>gi|260771041|ref|ZP_05879969.1| OxaI/YidC membrane insertion protein [Vibrio furnissii CIP 102972]
gi|375129462|ref|YP_004991558.1| inner membrane protein translocase component YidC [Vibrio furnissii
NCTC 11218]
gi|260613930|gb|EEX39121.1| OxaI/YidC membrane insertion protein [Vibrio furnissii CIP 102972]
gi|315178632|gb|ADT85546.1| hypothetical inner membrane protein translocase component YidC
[Vibrio furnissii NCTC 11218]
Length = 540
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 136/298 (45%), Gaps = 53/298 (17%)
Query: 44 VAKFGLR-PDPNSADG----VKELLGVAERLLFTLADAAVSSSDAVTTTKQNSDWLSGIT 98
+ G+R P+ ADG K L V +L +A A + D V + WL I
Sbjct: 280 LGDIGVRMPNKTIADGQQADFKATLWVGPKLQDQMA-ATAPNLDLVV----DYGWLWFIA 334
Query: 99 NVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVK 158
+ +L V++ + +G AII LT IV+ A +PLTK Q S MR L P+++
Sbjct: 335 KPLHWLLSVIQSFVGN------WGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQ 388
Query: 159 AIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTE 218
A++ER D++R+ E LYK +NPL GCLP +P++I LY AL + L
Sbjct: 389 AMRERIGDDRQRMSQEMMELYKTEKVNPLGGCLPIFLQMPIFISLYWALMESVE--LRHS 446
Query: 219 GFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISV 277
FF WI L+ Y +LP+L+ S + +
Sbjct: 447 PFFGWIHDLSAQD------------------------------PYYILPLLMGASMFF-I 475
Query: 278 KIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+ + + DP Q + F+P+M +F L PSGL LYW +N+++ QQ + K
Sbjct: 476 QKMSPTTVTDP---MQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQTLIYK 530
>gi|325267553|ref|ZP_08134205.1| inner membrane protein OxaA [Kingella denitrificans ATCC 33394]
gi|324980903|gb|EGC16563.1| inner membrane protein OxaA [Kingella denitrificans ATCC 33394]
Length = 556
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII+LT+IVKA +PL K S MR++AP+++A++++Y D+ +Q +LY+
Sbjct: 353 WGWAIIVLTIIVKAILYPLNNKAYRSMAKMRTVAPKMEALKKQYGDDKMGLQQAMMKLYR 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L +P++IGLY W+ L ++ RQ
Sbjct: 413 DEKINPLGGCLPMLVQMPIFIGLY-----------------WMIFL----SVELRQ---- 447
Query: 241 ISWLFPFVDGHPPLGWSDTFA----YLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P LGW + + +LP+L+ + + Q++ N P+ + +
Sbjct: 448 ----------APWLGWITDLSRPDPFFILPILMAATMWF-----QTTLNPPPSDPTQAQM 492
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PLM P+GL LY+ NNLL+ AQQ
Sbjct: 493 MKIMPLMFSVMFFFFPAGLVLYYVVNNLLTIAQQ 526
>gi|268596034|ref|ZP_06130201.1| inner membrane protein oxaA [Neisseria gonorrhoeae FA19]
gi|268549822|gb|EEZ44841.1| inner membrane protein oxaA [Neisseria gonorrhoeae FA19]
Length = 545
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 100/214 (46%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI++LT+IVKA +PLT S MR+ AP+++ I+E+Y D+ Q +LYK
Sbjct: 354 WGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQTIKEKYGDDRMAQQQAMMQLYK 413
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY AL ++ RQ
Sbjct: 414 DEKINPLGGCLPMLLQIPVFIGLYWALF---------------------ASVELRQA--- 449
Query: 241 ISWLFPFVDGHPPLGW----SDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P LGW S Y +LP+++ + + Q+ N P +
Sbjct: 450 -----------PWLGWITDLSRADPYYILPIIMAATMF-----AQTYLNPPPTDPMQAKM 493
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ P+GL LYW NNLL+ +QQ
Sbjct: 494 MKIMPLVFSVMFFFFPAGLVLYWVVNNLLTISQQ 527
>gi|237756916|ref|ZP_04585388.1| 60 kDa inner membrane insertion protein [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237690917|gb|EEP60053.1| 60 kDa inner membrane insertion protein [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 515
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 107/225 (47%), Gaps = 41/225 (18%)
Query: 115 LHVPYAY----GFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQER 170
LH Y + G AII+LTV+++ FPL K +++ M LAP+++ ++++YA D ++
Sbjct: 324 LHFIYDFVHNWGLAIIVLTVLLRIVLFPLNHKSLKAMKKMADLAPEMEKLKKKYAKDPQK 383
Query: 171 IQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPT 230
++ E +LY AG NP++GCLP LA IP++I LY L
Sbjct: 384 LREEIMKLYAEAGANPMSGCLPILAQIPIFIALYNVL----------------------M 421
Query: 231 TIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNM 290
+N + W+ D P Y VLP+L+ +S + I S N
Sbjct: 422 VTVELKNAPFMLWIKDLSDKDP---------YYVLPILMGLSMVVQQFITPISDKN---- 468
Query: 291 KSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+ + L + + ++ PSGL LYW TNN+L Q V + K
Sbjct: 469 --QRMIMYILAGVFTFMFMNFPSGLVLYWLTNNILGLIQSVIVNK 511
>gi|34580968|ref|ZP_00142448.1| 60 kD inner-membrane protein [Rickettsia sibirica 246]
gi|28262353|gb|EAA25857.1| 60 kD inner-membrane protein [Rickettsia sibirica 246]
Length = 560
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 118/222 (53%), Gaps = 27/222 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L K S M++L P++ I+ Y+ D+ R+ E LYK
Sbjct: 361 FGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEIMALYK 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
+NP+AGCLP L IPV+ +Y+ L V E + WI L+ PTTI N
Sbjct: 421 KEKVNPVAGCLPILVQIPVFFSIYKVLY-VTIEMRQAPFYGWIKDLSASDPTTIF---NL 476
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G L PF PP ++L++ P+L+ ++ ++ K+ S + DP M++
Sbjct: 477 FG---LLPF---SPP-------SFLMIGAWPILMAITMFLQQKM--SPEPADP-MQAQ-- 518
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
+ F+PL+ + S P GL +YW NN+LS QQ ++ KF
Sbjct: 519 VMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQQYYINKFN 560
>gi|290959008|ref|YP_003490190.1| hypothetical protein SCAB_45861 [Streptomyces scabiei 87.22]
gi|260648534|emb|CBG71645.1| putative membrane protein [Streptomyces scabiei 87.22]
Length = 421
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 119/229 (51%), Gaps = 24/229 (10%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L ++++ PL KQ++++ AM++L P++K IQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDKQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADE---GLLTEGFFWIPSLAGPTTIAAR 235
YK G NPL+ CLP LA P + LY L+++A+ G++ + A +
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLNSIANNDTIGVINQSLL---------ESAQK 146
Query: 236 QNGSGISWLFPFVDGHP---PLGWSDTFAYLVLPVLLVV---SQYISVKIIQSSQNND-- 287
+ G F D L S T +V V++V+ SQ+ + + + ++N D
Sbjct: 147 AHIFGAPLAAKFTDSTADVVALDASLTTVRIVTAVMIVLMSASQFYTQRQLM-TKNVDTT 205
Query: 288 ---PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P+M F ++ P G+ +YW T N+ + QQ+++
Sbjct: 206 VKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTMGQQMYV 254
>gi|289548954|ref|YP_003473942.1| membrane protein insertase, YidC/Oxa1 family [Thermocrinis albus
DSM 14484]
gi|289182571|gb|ADC89815.1| membrane protein insertase, YidC/Oxa1 family [Thermocrinis albus
DSM 14484]
Length = 498
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 113/227 (49%), Gaps = 40/227 (17%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+++ F+I++LT++V+ FPLT K S M + LAP+++ ++E+Y D + Q E +L
Sbjct: 304 HSWVFSILVLTLLVRLIVFPLTYKSTVSMMRLSELAPKMQELREKYKDDPVKFQEELMKL 363
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNG 238
Y AG NP++GCLP L IP++ LY+ L+ A+ L F WIPSLA
Sbjct: 364 YAEAGFNPMSGCLPILLQIPIFFALYKVLTITAE--LQLASFLWIPSLAQKD-------- 413
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTN 298
Y +LP+L+ V+ + + Q P SQ L
Sbjct: 414 ----------------------PYYLLPILMGVT-------MIAQQWVSPAPDKSQNLMM 444
Query: 299 FLPLMIGYFAL-SVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMK 344
++ ++ F S PSGL LYW NN+L+ Q +++F ++P +
Sbjct: 445 YVTSVVFTFLFASFPSGLVLYWTFNNILNIVQSYVIKRFLLKEEPKR 491
>gi|32265611|ref|NP_859643.1| inner membrane protein translocase component YidC [Helicobacter
hepaticus ATCC 51449]
gi|38502920|sp|Q7VJY0.1|YIDC_HELHP RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|32261659|gb|AAP76709.1| conserved hypothetical membrane protein [Helicobacter hepaticus
ATCC 51449]
Length = 591
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 110/222 (49%), Gaps = 37/222 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+IV+ +PLT K + S ++ LAP++K +Q RY D +++Q+ LYK
Sbjct: 388 WGWAIVLLTLIVRIVLYPLTYKGMVSMQKLKDLAPKMKDLQTRYKDDPQKLQIHMMDLYK 447
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E + WI L+
Sbjct: 448 KHGANPLGGCLPLILQIPVFFAIYRVLHN-AVELKSSAWILWITDLSA------------ 494
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y VLPVL+ VS YIS K+ S+ DP + + L
Sbjct: 495 -------ID-----------PYFVLPVLMGVSMYISQKLTPSN-FTDP---MQEKIFKML 532
Query: 301 PLM--IGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
P + I + P+GL LYW NN+ S QQ+ + K K
Sbjct: 533 PWVFTIFFIIFPFPAGLVLYWTINNVFSIIQQISINKIMEGK 574
>gi|238650515|ref|YP_002916367.1| putative inner membrane protein translocase component YidC
[Rickettsia peacockii str. Rustic]
gi|259515722|sp|C4K168.1|YIDC_RICPU RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|238624613|gb|ACR47319.1| putative inner membrane protein translocase component YidC
[Rickettsia peacockii str. Rustic]
Length = 560
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 118/222 (53%), Gaps = 27/222 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L K S M++L P++ I+ Y+ D+ R+ E LYK
Sbjct: 361 FGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEIMALYK 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
+NP+AGCLP L IPV+ +Y+ L V E + WI L+ PTTI N
Sbjct: 421 KEKVNPVAGCLPILVQIPVFFSIYKVLY-VTIEMRQAPFYGWIKDLSAPDPTTIF---NL 476
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G L PF PP ++L++ P+L+ ++ ++ K+ S + DP M++
Sbjct: 477 FG---LLPF---SPP-------SFLMIGAWPILMAITMFLQQKM--SPEPADP-MQAQ-- 518
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
+ F+PL+ + S P GL +YW NN+LS QQ ++ KF
Sbjct: 519 VMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQQYYINKFN 560
>gi|392423385|ref|YP_006459989.1| membrane protein insertase [Pseudomonas stutzeri CCUG 29243]
gi|390985573|gb|AFM35566.1| membrane protein insertase [Pseudomonas stutzeri CCUG 29243]
Length = 556
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 109/215 (50%), Gaps = 36/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++II+LT+++K A FPL+ S MR+++P+++A++E++ D++++ LYK
Sbjct: 369 WGWSIIVLTIVIKLAFFPLSAASYRSMARMRAVSPKMQALKEQHGDDRQKMSQAMMELYK 428
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L +PV++ LY L ++ RQ
Sbjct: 429 KEKINPLGGCLPILVQMPVFLALYWVLLE---------------------SVEMRQA--- 464
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+F D L D F +LP+++ V+ +I Q N P + L
Sbjct: 465 -PWMFWITD----LSIKDPF--FILPIIMGVTMFI-----QQQLNPTPPDPMQARVMKLL 512
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++ +F L P+GL LYW NN+LS AQQ ++ +
Sbjct: 513 PVIFTFFFLWFPAGLVLYWVVNNVLSIAQQWYITR 547
>gi|383481015|ref|YP_005389930.1| membrane protein insertase [Rickettsia rhipicephali str.
3-7-female6-CWPP]
gi|378933354|gb|AFC71857.1| membrane protein insertase [Rickettsia rhipicephali str.
3-7-female6-CWPP]
Length = 560
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 118/222 (53%), Gaps = 27/222 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L K S M++L P++ I+ Y+ D+ R+ E LYK
Sbjct: 361 FGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEIMALYK 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
+NP+AGCLP L IPV+ +Y+ L V E + WI L+ PTTI N
Sbjct: 421 KEKVNPVAGCLPILVQIPVFFSIYKVLY-VTIEMRQAPFYGWIKDLSAPDPTTIF---NL 476
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G L PF PP ++L++ P+L+ ++ ++ K+ S + DP M++
Sbjct: 477 FG---LLPF---SPP-------SFLMIGAWPILMAITMFLQQKM--SPEPADP-MQAQ-- 518
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
+ F+PL+ + S P GL +YW NN+LS QQ ++ KF
Sbjct: 519 VMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQQYYINKFN 560
>gi|440714013|ref|ZP_20894601.1| 60 kDa inner membrane insertion protein [Rhodopirellula baltica
SWK14]
gi|436441209|gb|ELP34475.1| 60 kDa inner membrane insertion protein [Rhodopirellula baltica
SWK14]
Length = 822
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 116/219 (52%), Gaps = 14/219 (6%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
Y AI+LLT+ V+ FPL++K ++ M+ LAP++K I E++ D E L +
Sbjct: 532 YALAIVLLTLCVRGLMFPLSRKAAINAQRMQELAPELKKIAEKHKDDMEARVRAQRELQQ 591
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF----WIPSLAGPTTIAARQ 236
G NP+AGC P +P++IGLYR LS D L F W +LA P +
Sbjct: 592 RVGFNPMAGCAPMFLQLPIFIGLYRTLS--VDIELRQAAFASWTTWASNLAAPDMMYYWG 649
Query: 237 NGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
+ W++ ++ G GW + + +LP ++VVS +++ + + D +Q +
Sbjct: 650 D-----WMWDYLAGR-GTGWLGPY-FNLLP-MIVVSLFLAQQKMFMPPATDEQTAMTQKM 701
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
N++ L++G F VP+GL +Y+ T++L +++ ++K
Sbjct: 702 MNYMTLVMGLFFFRVPAGLCIYFITSSLWGIGERILVKK 740
>gi|269122721|ref|YP_003310898.1| hypothetical protein Sterm_4135 [Sebaldella termitidis ATCC 33386]
gi|268616599|gb|ACZ10967.1| 60 kDa inner membrane insertion protein [Sebaldella termitidis ATCC
33386]
Length = 219
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 118/217 (54%), Gaps = 26/217 (11%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG IILLTV+++ PLT KQ +S MR + P+V ++E+Y + + +Q++ +YK
Sbjct: 24 YGIGIILLTVLIRVIILPLTIKQEKSMKKMRDIQPEVDKLREKYKDNPQEMQIKMQEIYK 83
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+AGCLP + ++I L+R L++ A+ F W +L P
Sbjct: 84 KNQVNPMAGCLPLFVQMCIFITLFRVLND-ANSIPNDATFLWF-NLKQP----------- 130
Query: 241 ISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYISVKIIQS-SQNNDPNMKSSQALTN 298
D L ++ F+ + + P+L V + K++ + +Q+++P MK+ +
Sbjct: 131 --------DALVKLPFTGMFSAINIFPLLNTVVTFFQQKMMSTGTQDSNPQMKT---MLY 179
Query: 299 FLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
LPL+I ++PSG+SLYWFT++LL+ QQ ++ K
Sbjct: 180 TLPLVILVMTYNMPSGVSLYWFTSSLLAVIQQFFIMK 216
>gi|375008892|ref|YP_004982525.1| 60 kDa inner membrane insertion protein [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|359287741|gb|AEV19425.1| 60 kDa inner membrane insertion protein [Geobacillus
thermoleovorans CCB_US3_UF5]
Length = 249
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 108/218 (49%), Gaps = 39/218 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGD----QERIQLETA 176
YG AII+LT+IV+ PL KQ +S+AM+ L P++ +QE+Y Q ++Q E
Sbjct: 55 YGIAIIVLTLIVRFCLLPLILKQFRASLAMQKLRPELLKLQEKYKSKDPETQRKLQQEMM 114
Query: 177 RLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ 236
+LY+ G+NP +GCLP L +P+++ LY A+S + + T F W+
Sbjct: 115 QLYQKHGVNPASGCLPVLIQMPIFMALYYAISRTQE--IKTHSFLWV------------- 159
Query: 237 NGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
LG D Y +LPVL ++ +IS+++ S + M +
Sbjct: 160 ----------------ELGHRD--PYFILPVLAALTTFISLRL--SPSMAEEQMPQMAMM 199
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
+ +P+MI A SVPS LSLYW S Q + L+
Sbjct: 200 SYIMPVMIFIGASSVPSALSLYWVVGGCFSIIQSLILR 237
>gi|261420019|ref|YP_003253701.1| YidC/Oxa1 family membrane protein insertase [Geobacillus sp.
Y412MC61]
gi|297530020|ref|YP_003671295.1| YidC/Oxa1 family membrane protein insertase [Geobacillus sp.
C56-T3]
gi|319766834|ref|YP_004132335.1| YidC/Oxa1 family membrane protein insertase [Geobacillus sp.
Y412MC52]
gi|261376476|gb|ACX79219.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp.
Y412MC61]
gi|297253272|gb|ADI26718.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp.
C56-T3]
gi|317111700|gb|ADU94192.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp.
Y412MC52]
Length = 249
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 108/218 (49%), Gaps = 39/218 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGD----QERIQLETA 176
YG AII+LT+IV+ PL KQ +S+AM+ L P++ +QE+Y Q ++Q E
Sbjct: 55 YGIAIIVLTLIVRFCLLPLILKQFRASLAMQKLRPELLKLQEKYKSKDPETQRKLQQEMM 114
Query: 177 RLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ 236
+LY+ G+NP +GCLP L +P+++ LY A+S + + T F W+
Sbjct: 115 QLYQKHGVNPASGCLPVLIQMPIFMALYYAISRTQE--IKTHSFLWV------------- 159
Query: 237 NGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
LG D Y +LPVL ++ +IS+++ S + M +
Sbjct: 160 ----------------ELGHRD--PYFILPVLAALTTFISLRL--SPSMAEEQMPQMAMM 199
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
+ +P+MI A SVPS LSLYW S Q + L+
Sbjct: 200 SYIMPVMIFIGASSVPSALSLYWVVGGCFSIIQSLILR 237
>gi|165932637|ref|YP_001649426.1| membrane protein insertase [Rickettsia rickettsii str. Iowa]
gi|378723457|ref|YP_005288341.1| membrane protein insertase [Rickettsia rickettsii str. Hauke]
gi|379017246|ref|YP_005293480.1| membrane protein insertase [Rickettsia rickettsii str. Hino]
gi|189036358|sp|B0BVZ4.1|YIDC_RICRO RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|165907724|gb|ABY72020.1| 60 kDa inner membrane protein [Rickettsia rickettsii str. Iowa]
gi|376329811|gb|AFB27047.1| membrane protein insertase [Rickettsia rickettsii str. Hino]
gi|376332472|gb|AFB29705.1| membrane protein insertase [Rickettsia rickettsii str. Hauke]
Length = 560
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 118/222 (53%), Gaps = 27/222 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L K S M++L P++ I+ Y+ D+ R+ E LYK
Sbjct: 361 FGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEIMALYK 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
+NP+AGCLP L IPV+ +Y+ L V E + WI L+ PTTI N
Sbjct: 421 KEKVNPVAGCLPILVQIPVFFSIYKVLY-VTIEMRQAPFYGWIKDLSAPDPTTIF---NL 476
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G L PF PP ++L++ P+L+ ++ ++ K+ S + DP M++
Sbjct: 477 FG---LLPFA---PP-------SFLMIGAWPILMAITMFLQQKM--SPEPADP-MQAQ-- 518
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
+ F+PL+ + S P GL +YW NN+LS QQ ++ KF
Sbjct: 519 VMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQQYYINKFN 560
>gi|392966450|ref|ZP_10331869.1| membrane protein insertase, YidC/Oxa1 family [Fibrisoma limi BUZ 3]
gi|387845514|emb|CCH53915.1| membrane protein insertase, YidC/Oxa1 family [Fibrisoma limi BUZ 3]
Length = 632
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 141/307 (45%), Gaps = 47/307 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG IILL V VK PLT + S MR L P++ I+E+ D ++Q E +LY+
Sbjct: 367 YGLLIILLVVFVKTVLTPLTYRSYVSMAKMRVLQPELNEIREKVGDDMTKMQSEQMKLYQ 426
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G++PL+GC+P LAT+P+ L+ N+ + L + F W L+ T A +
Sbjct: 427 QVGVSPLSGCIPVLATMPILFALFMLFPNLIE--LRQKPFLWADDLS--TYDAFIKFPVN 482
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I PFV H L VL+ S + P + +AL+
Sbjct: 483 I----PFVGSHLSL----------FTVLMTASSIAYAWYNNQTTPTQPGPVNMKALSYIF 528
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDERLDINKS 360
PLM + S P+GL+ Y+F +N+++ QQ +++F D IK LD N+
Sbjct: 529 PLMFMFVLNSYPAGLTFYYFVSNIVTITQQQLIRRFVD--------EDKIK-AVLDENR- 578
Query: 361 VPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRRQQREEEKRKAAEAAAKG-NQT 419
+K A + EG +PG F+ + +R+ Q EE RK AE A +G N
Sbjct: 579 -------RKNA------SGEGKKPG-GFQAM----LQRQLQAAEEARKQAEEAKRGRNNG 620
Query: 420 INGEQER 426
+G +R
Sbjct: 621 TSGTGQR 627
>gi|379018578|ref|YP_005294812.1| membrane protein insertase [Rickettsia rickettsii str. Hlp#2]
gi|376331158|gb|AFB28392.1| membrane protein insertase [Rickettsia rickettsii str. Hlp#2]
Length = 561
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 118/222 (53%), Gaps = 27/222 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L K S M++L P++ I+ Y+ D+ R+ E LYK
Sbjct: 362 FGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEIMALYK 421
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
+NP+AGCLP L IPV+ +Y+ L V E + WI L+ PTTI N
Sbjct: 422 KEKVNPVAGCLPILVQIPVFFSIYKVLY-VTIEMRQAPFYGWIKDLSAPDPTTIF---NL 477
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G L PF PP ++L++ P+L+ ++ ++ K+ S + DP M++
Sbjct: 478 FG---LLPFA---PP-------SFLMIGAWPILMAITMFLQQKM--SPEPADP-MQAQ-- 519
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
+ F+PL+ + S P GL +YW NN+LS QQ ++ KF
Sbjct: 520 VMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQQYYINKFN 561
>gi|363890031|ref|ZP_09317378.1| hypothetical protein HMPREF9628_01820 [Eubacteriaceae bacterium
CM5]
gi|361966060|gb|EHL19004.1| hypothetical protein HMPREF9628_01820 [Eubacteriaceae bacterium
CM5]
Length = 253
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 118/227 (51%), Gaps = 33/227 (14%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
Y +IIL T++ K PLT Q+ S AM+++ P+V I ++Y G+ ++ + ++LYK
Sbjct: 22 YALSIILFTIVTKFILLPLTFSQMRSMNAMKTIQPKVDEINKKYKGNPQKQSEKLSQLYK 81
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALS--------NVADEGLLTEGFFWIPSLAGPTTI 232
G+NP AGCLP L P+ I +YR + N L+ +GFFWI SL P I
Sbjct: 82 ENGVNPAAGCLPLLIQFPILIAMYRVVREPIKYVFLNETAYNLVDKGFFWIKSLEVPDVI 141
Query: 233 AARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKS 292
A + GI+ P+ +LPVL + Y+ +++ S ++ N +
Sbjct: 142 AIQ----GIN--LPY----------------ILPVLSALFTYVQMQMSMSRSSSSSNATA 179
Query: 293 ---SQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKF 336
++ +T +PLM+ + +++P+GL LYW T L+ QQ + K+
Sbjct: 180 EGMNKTMTYMMPLMMLVWGVNLPAGLILYWATGTLVQILQQYLIGKY 226
>gi|86747809|ref|YP_484305.1| putative inner membrane protein translocase component YidC
[Rhodopseudomonas palustris HaA2]
gi|86570837|gb|ABD05394.1| protein translocase subunit yidC [Rhodopseudomonas palustris HaA2]
Length = 629
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 121/252 (48%), Gaps = 25/252 (9%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W IT M L H+ +G AI+L+TV++K PL K S M++
Sbjct: 381 WFYFITKPMFLALDFF------FHLVGNFGVAILLVTVLIKVLFLPLANKSYASMAKMKA 434
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
+ PQ+ A++ER+ D+ + Q E +Y+ INP+AGCLP L IPV+ LY+ L V
Sbjct: 435 IQPQLLALKERHPDDKAKQQQEMMEIYRKEKINPVAGCLPVLLQIPVFFSLYKVLF-VTI 493
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPF-VDGHPPLGWSDTFAYLVL---PVL 268
E F WI L+ A N + L PF P LG YLVL P++
Sbjct: 494 EMRHAPFFGWIHDLSA----ADPTNLFNLFGLLPFDPTAIPVLG-----HYLVLGVWPLV 544
Query: 269 LVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTA 328
+ + + +K+ N P + Q + ++P++ + P+GL +YW NNLLS
Sbjct: 545 MGFTMWFQMKL-----NPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNLLSVI 599
Query: 329 QQVWLQKFGGAK 340
QQ ++ + G K
Sbjct: 600 QQAYIMRRNGVK 611
>gi|157827949|ref|YP_001494191.1| putative inner membrane protein translocase component YidC
[Rickettsia rickettsii str. 'Sheila Smith']
gi|378720747|ref|YP_005285634.1| membrane protein insertase [Rickettsia rickettsii str. Colombia]
gi|378722098|ref|YP_005286984.1| membrane protein insertase [Rickettsia rickettsii str. Arizona]
gi|379016991|ref|YP_005293226.1| membrane protein insertase [Rickettsia rickettsii str. Brazil]
gi|166977410|sp|A8GQK8.1|YIDC_RICRS RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|157800430|gb|ABV75683.1| putative inner membrane protein translocase component YidC
[Rickettsia rickettsii str. 'Sheila Smith']
gi|376325515|gb|AFB22755.1| membrane protein insertase [Rickettsia rickettsii str. Brazil]
gi|376325771|gb|AFB23010.1| membrane protein insertase [Rickettsia rickettsii str. Colombia]
gi|376327122|gb|AFB24360.1| membrane protein insertase [Rickettsia rickettsii str. Arizona]
Length = 560
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 118/222 (53%), Gaps = 27/222 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L K S M++L P++ I+ Y+ D+ R+ E LYK
Sbjct: 361 FGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEIMALYK 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
+NP+AGCLP L IPV+ +Y+ L V E + WI L+ PTTI N
Sbjct: 421 KEKVNPVAGCLPILVQIPVFFSIYKVLY-VTIEMRQAPFYGWIKDLSAPDPTTIF---NL 476
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G L PF PP ++L++ P+L+ ++ ++ K+ S + DP M++
Sbjct: 477 FG---LLPFA---PP-------SFLMIGAWPILMAITMFLQQKM--SPEPADP-MQAQ-- 518
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
+ F+PL+ + S P GL +YW NN+LS QQ ++ KF
Sbjct: 519 VMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQQYYINKFN 560
>gi|334342406|ref|YP_004547386.1| membrane protein insertase YidC/Oxa1 family [Desulfotomaculum
ruminis DSM 2154]
gi|334093760|gb|AEG62100.1| membrane protein insertase, YidC/Oxa1 family [Desulfotomaculum
ruminis DSM 2154]
Length = 227
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 53/234 (22%)
Query: 137 FPLTKKQVESSMAMRSLAPQVKAIQERYAG-DQERIQLETARLYKLAGINPLAGCLPTLA 195
+PL+KKQ+ S + M+ L P++KAIQ++Y D +++Q LYK +NP+AGCLP L
Sbjct: 44 YPLSKKQMHSMVMMQKLGPEIKAIQDKYKNKDPQKMQQMIMDLYKENNVNPMAGCLPLLV 103
Query: 196 TIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLG 255
+P+ I LYRAL + FFW+ SL
Sbjct: 104 QMPILIALYRALYAFPFKNPEHAHFFWVASL----------------------------- 134
Query: 256 WSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGL 315
S Y +LP++ V+ Y K+ ++Q+ ++ + + +P+MIG+ A +VP+GL
Sbjct: 135 -SHKDPYYILPLIAAVTTYFQSKMTTNAQD-----QTQRTMLYIMPVMIGWIASTVPAGL 188
Query: 316 SLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKK 369
+LYW N++ QQ W I E L + + V G+ S +K
Sbjct: 189 ALYWVVFNVVGIIQQ-WF----------------INKETLQMKEGVTGVESGRK 225
>gi|186477842|ref|YP_001859312.1| putative inner membrane protein translocase component YidC
[Burkholderia phymatum STM815]
gi|254772761|sp|B2JJR8.1|YIDC_BURP8 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|184194301|gb|ACC72266.1| 60 kDa inner membrane insertion protein [Burkholderia phymatum
STM815]
Length = 550
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 38/221 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 363 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 422
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRAL-SNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+NP GCLP + IPV+I LY L S+V G WI L+ +Q+
Sbjct: 423 TEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRG--APWILWIHDLS-------QQD-- 471
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
Y +LPVL+ VS ++ K+ N P + F
Sbjct: 472 ---------------------PYFILPVLMAVSMFVQTKL-----NPTPPDPVQAKMMMF 505
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+P+ P+GL LY+ NN+LS AQQ ++ + G K
Sbjct: 506 MPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMGQK 546
>gi|94501616|ref|ZP_01308133.1| putative inner membrane protein translocase component YidC
[Bermanella marisrubri]
gi|94426299|gb|EAT11290.1| putative inner membrane protein translocase component YidC
[Oceanobacter sp. RED65]
Length = 538
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 119/243 (48%), Gaps = 42/243 (17%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
WL + + +L+++ D + +G+AII+LT++VK A FPL+ S MR
Sbjct: 328 WLWWVAQPLFWLLQLMHD------IAGNWGWAIIMLTILVKLAFFPLSAASYRSMANMRR 381
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
+AP++ AI+E+YA ++E++ E LYK INPL GCLP L +PV+I LY L
Sbjct: 382 VAPKLTAIKEQYADNREQLSKEMMNLYKKEKINPLGGCLPILVQMPVFIALYWVLME--- 438
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
++ RQ PF+ L D Y +LP+++ S
Sbjct: 439 ------------------SVELRQA--------PFMLWIEDLSLKD--PYFILPLIMGAS 470
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ +++ N P + +P++ F L P+GL LYW NNLLS AQQ +
Sbjct: 471 MFVQMQL-----NPTPPDPMQAKVMKLMPVVFTVFFLFFPAGLVLYWVVNNLLSIAQQYY 525
Query: 333 LQK 335
+ +
Sbjct: 526 ITR 528
>gi|225848362|ref|YP_002728525.1| 60 kDa inner-membrane protein [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643468|gb|ACN98518.1| 60 kDa inner-membrane protein [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 514
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 106/228 (46%), Gaps = 47/228 (20%)
Query: 115 LHVPYAY----GFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQER 170
LH Y Y G AII+LTV+++ FPL K +++ M LAP+++ ++++YA D ++
Sbjct: 323 LHFFYTYIPNWGVAIIILTVLIRILFFPLNHKSLKAMRKMADLAPEIEKLKKKYAKDPQK 382
Query: 171 IQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPT 230
+Q E +LY AG NP++GCLP L IPV+I LY L
Sbjct: 383 LQEEIMKLYAEAGANPMSGCLPILVQIPVFIALYNVL----------------------M 420
Query: 231 TIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNM 290
+N I W+ D P Y +LP+L+ +S I SS N +
Sbjct: 421 VTVELKNAPFILWIKDLSDKDP---------YYILPILMGLSMIAQQWITPSSDKNQKMI 471
Query: 291 KSSQALTNFLPLMIGYFA---LSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+ +M G F ++ P+GL LYW TNN+L Q + K
Sbjct: 472 ---------MYIMAGVFTFMFMNFPAGLVLYWLTNNILGLLQSFIVNK 510
>gi|406956496|gb|EKD84580.1| hypothetical protein ACD_38C00193G0009 [uncultured bacterium]
Length = 290
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 138/276 (50%), Gaps = 40/276 (14%)
Query: 104 VLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQER 163
+L ++ G+S L++P A GF+II LT++++ +P +Q++++ M L P + A++++
Sbjct: 30 LLVLIFQGLSALNIPGALGFSIISLTILIRVLVWPFMSQQIKATKKMADLKPHLDALKKK 89
Query: 164 YAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNV--ADEGLL--TEG 219
+ GD++ + LYK G+NP GCLP L IPV+I LY+A+ N+ G L
Sbjct: 90 HKGDKQALASAQMALYKEHGVNPAGGCLPALIQIPVFIALYQAIINILPGAGGHLDKINS 149
Query: 220 FFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAY----LVLPVLLVVSQYI 275
+ P L P+ + G + G P SD Y L++P++ + ++
Sbjct: 150 LLYFPQLKLPSALDPNFFGLNL--------GIKP---SDFGKYGILLLLVPIVTALLTFV 198
Query: 276 SVKI-----IQSSQNNDP-----------NMKSSQA-LTNFLPLMIGYFALSVPSGLSLY 318
K+ I+ ++ P +M Q+ + +P+MIGYFA S P GL++Y
Sbjct: 199 QSKMTLPKPIKHYPSDSPKEGKEKEGLEESMGQVQSQMVYLMPVMIGYFAFSFPIGLAIY 258
Query: 319 WFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDER 354
W T +L QQ + +GG M+ IK +R
Sbjct: 259 WNTYTILGIIQQYKVSGWGG----MEWLISKIKYQR 290
>gi|290477350|ref|YP_003470271.1| preprotein translocase cooperates with SecYEG and SecDFyajC
translocon membrane protein [Xenorhabdus bovienii
SS-2004]
gi|289176704|emb|CBJ83513.1| preprotein translocase, cooperates with SecYEG and SecDFyajC
translocon, membrane component [Xenorhabdus bovienii
SS-2004]
Length = 537
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 129/282 (45%), Gaps = 54/282 (19%)
Query: 53 PNSADGVKELLGVAERLLFTLADAAVSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGM 112
PNS + L V + +A+ A V + WL I+ + +LK L + +
Sbjct: 288 PNSKQNISSTLWVGPEIQDKMAEVAPHLDLTV-----DYGWLWFISQPLFKLLKFLHEFI 342
Query: 113 STLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQ 172
+GF+II +T IV+ +PLTK Q S MR L P++ A++ER+ D++R+
Sbjct: 343 GN------WGFSIIAITFIVRGIMYPLTKAQYTSMAKMRLLQPKITAMRERHGDDRQRMS 396
Query: 173 LETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTI 232
E LYK +NPL GCLP + +P+++ LY L ++
Sbjct: 397 QEMMALYKTEKVNPLGGCLPLVIQMPIFLALYYMLMG---------------------SV 435
Query: 233 AARQNGSGISWLFPFVDGHPPLGWSDTFA----YLVLPVLLVVSQYISVKIIQSSQNNDP 288
R PF+ GW + + Y +LP+L+ + ++ ++ + + DP
Sbjct: 436 ELRHA--------PFI------GWIEDLSAQDPYYILPLLMGATMFV-IQKLSPTTVTDP 480
Query: 289 NMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
Q + ++P+M F L PSGL LY+ +NL++ QQ
Sbjct: 481 ---MQQKIMTYMPVMFTVFFLWFPSGLVLYYIVSNLVTIIQQ 519
>gi|357390826|ref|YP_004905667.1| putative OxaA family protein [Kitasatospora setae KM-6054]
gi|311897303|dbj|BAJ29711.1| putative OxaA family protein [Kitasatospora setae KM-6054]
Length = 397
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 119/217 (54%), Gaps = 15/217 (6%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
A+G +I+++ V+++ PL KQ++++ AM+++ P++KAIQERY D++R E +LY
Sbjct: 35 AWGLSIVMMVVVIRICLIPLFVKQIKATRAMQAIQPKMKAIQERYKNDKQRQSEEMMKLY 94
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
K AG NP + CLP L P + LY L+++A++ T G P L + A G+
Sbjct: 95 KEAGTNPFSSCLPILVQAPFFTALYGVLASIANDK--TIGVIDQPLLE--SAKQAHIFGA 150
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNND-----PNMKSSQ 294
+S F G + A ++ VL+ +SQ+++ + + ++N D P M+ +
Sbjct: 151 PLSAKF---VGAETVQIQIVCAVMI--VLMSLSQFVTQRQLM-TKNVDLSVKTPFMQQQK 204
Query: 295 ALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
L P+M ++ P G+ +YW T N+ S AQQ+
Sbjct: 205 MLMYVFPIMFAVMGINFPVGVLVYWLTTNVWSMAQQL 241
>gi|435855278|ref|YP_007316597.1| preprotein translocase subunit YidC [Halobacteroides halobius DSM
5150]
gi|433671689|gb|AGB42504.1| preprotein translocase subunit YidC [Halobacteroides halobius DSM
5150]
Length = 220
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 112/231 (48%), Gaps = 42/231 (18%)
Query: 108 LKDGMSTLHVPY-----AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQE 162
L D M +L + + +YG AII LTV V+ FPL KQ S M+ L P+++ ++E
Sbjct: 13 LGDFMQSLLIWFYGFTGSYGLAIISLTVAVRVVLFPLVAKQTRSMKKMQELQPKMEELKE 72
Query: 163 RYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFW 222
+Y D++ Q +T LY+ +NP +GCLP L +P+ GL+R L + L + F
Sbjct: 73 KYGDDKQEFQQKTMELYQKHQVNPASGCLPLLVQMPILFGLFRGLRGWQE--LTGQSFLM 130
Query: 223 IPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQS 282
+P L+ P YL L VL ++ + Q
Sbjct: 131 VPDLSDP--------------------------------YLPLVVLTGLTMLGQSLLTQK 158
Query: 283 SQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
ND ++ + F+PL+I + S+PSG+ LYWFT+NL+ T QQ +L
Sbjct: 159 LSGND---AANNKMLLFMPLLIVFIGYSLPSGVLLYWFTSNLIMTIQQYFL 206
>gi|153007343|ref|YP_001381668.1| 60 kDa inner membrane insertion protein [Anaeromyxobacter sp.
Fw109-5]
gi|166975849|sp|A7HIY8.1|YIDC_ANADF RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|152030916|gb|ABS28684.1| 60 kDa inner membrane insertion protein [Anaeromyxobacter sp.
Fw109-5]
Length = 549
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 110/215 (51%), Gaps = 36/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLTV+VK +PLT K ++S MR L P+++ ++ ++ D+E++ L T +LY+
Sbjct: 358 WGLAIILLTVLVKVLLYPLTAKSMQSMNEMRKLQPEIEKLKAKHGNDREKLNLATMQLYQ 417
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPL GCLP L +P+W LY L + L E F WI L T+
Sbjct: 418 QHKVNPLGGCLPMLIQLPIWFALYATLQTSVE--LYREPFLWIHDL----TV-------- 463
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
PL VLP+ + VSQY+ + +N ++ + F+
Sbjct: 464 ----------KDPL--------YVLPIAMGVSQYVMQRFSPQPADN----AQAKMMLYFM 501
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P LSVP+GL+LY F NNLLS AQQ ++ +
Sbjct: 502 PGFFTLLMLSVPAGLTLYIFVNNLLSIAQQQFMMR 536
>gi|157825202|ref|YP_001492922.1| putative inner membrane protein translocase component YidC
[Rickettsia akari str. Hartford]
gi|166977406|sp|A8GLY9.1|YIDC_RICAH RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|157799160|gb|ABV74414.1| putative inner membrane protein translocase component YidC
[Rickettsia akari str. Hartford]
Length = 560
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 119/222 (53%), Gaps = 27/222 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L K S +++L P++ I+ Y+ D+ R+ E LYK
Sbjct: 361 FGVSILIVTVIIKLLMFTLANKSYRSMKKIKNLQPEIDRIKNLYSDDKARLNQEIMALYK 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
+NP+AGCLP L IPV+ +Y+ L V E + + WI L+ PTTI N
Sbjct: 421 KEKVNPVAGCLPILVQIPVFFSIYKVLY-VTIEMRQAQFYGWIKDLSAPDPTTIF---NL 476
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G L PF PP ++L++ P+L+ ++ ++ K+ S + DP M++
Sbjct: 477 FG---LLPF---SPP-------SFLMIGAWPILMAITMFLQQKM--SPEPADP-MQAQ-- 518
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
+ F+PL+ + S P GL +YW NN+LS QQ ++ KF
Sbjct: 519 VMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQQYYINKFN 560
>gi|313202488|ref|YP_004041146.1| 60 kda inner membrane insertion protein [Methylovorus sp. MP688]
gi|312441804|gb|ADQ85910.1| 60 kDa inner membrane insertion protein [Methylovorus sp. MP688]
Length = 549
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 113/238 (47%), Gaps = 42/238 (17%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
WL+ I + + +L ++ V + +G AIILLTV++K A +PL+ S MR
Sbjct: 333 WLTIIASPLFWILSKIES------VVHNWGVAIILLTVMIKLAFYPLSAASYRSMAHMRE 386
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP+++ ++E+Y D++++Q+ LYK INP+ GCLP L IPV+I LY L +
Sbjct: 387 LAPRLQRLKEQYGDDRQKMQVAMMELYKTEKINPMGGCLPILVQIPVFISLYWVLLG-SV 445
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E WI L+ +D Y VLP+L+ +
Sbjct: 446 EMRHAPFMLWIHDLSA-------------------ID-----------PYYVLPILMGAT 475
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
IIQ+ N P + +P++ F P+GL LYW NN+LS AQQ
Sbjct: 476 M-----IIQTRLNPTPTDPVQAKVMMIMPIVFSVFFFFFPAGLVLYWLVNNVLSIAQQ 528
>gi|296115059|ref|ZP_06833701.1| 60 kDa inner membrane insertion protein [Gluconacetobacter hansenii
ATCC 23769]
gi|295978396|gb|EFG85132.1| 60 kDa inner membrane insertion protein [Gluconacetobacter hansenii
ATCC 23769]
Length = 719
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 118/245 (48%), Gaps = 23/245 (9%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + +T+ + TVL L + +G A++ T++VK FPL KQ S MR
Sbjct: 340 WFAFLTHPIFTVLDWLNTLLGN------FGLALMAFTLVVKGLFFPLATKQFRSMGKMRQ 393
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P++KA++ERY DQ + LYK +NP +GCLP L IPV+ LY+ L V
Sbjct: 394 LQPKIKALRERYKDDQMALNQHMIALYKEEKVNPASGCLPMLLQIPVFWCLYKVLF-VTI 452
Query: 213 EGLLTEGFFWIPSL--AGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLV 270
E F WI L A PT I + L P+ H S F + P+
Sbjct: 453 EMRHAPFFGWIHDLSAADPTNIFT------LFGLIPWDPTH----ISTFFQLGLWPIAFG 502
Query: 271 VSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
++ + K I + DP + Q + +P++ +F PSGL +Y+ NNLL+ AQQ
Sbjct: 503 LTMFAQQK-INPAPAADP---AQQKMFQLMPILFTFFMARQPSGLVIYYCWNNLLTMAQQ 558
Query: 331 VWLQK 335
+Q+
Sbjct: 559 AVIQR 563
>gi|167587875|ref|ZP_02380263.1| putative inner membrane protein translocase component YidC
[Burkholderia ubonensis Bu]
Length = 504
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 107/221 (48%), Gaps = 37/221 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 316 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 375
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 376 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 410
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D L D F +LPVL+ VS ++ K+ N P + F+
Sbjct: 411 APWILWIHD----LSQRDPF--FILPVLMAVSMFVQTKL-----NPTPPDPVQAKMMMFM 459
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAK 340
P+ P+GL LY+ NN+LS AQQ ++ +K GG K
Sbjct: 460 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGLK 500
>gi|254000529|ref|YP_003052592.1| 60 kDa inner membrane insertion protein [Methylovorus
glucosetrophus SIP3-4]
gi|253987208|gb|ACT52065.1| 60 kDa inner membrane insertion protein [Methylovorus
glucosetrophus SIP3-4]
Length = 549
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 113/238 (47%), Gaps = 42/238 (17%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
WL+ I + + +L ++ V + +G AIILLTV++K A +PL+ S MR
Sbjct: 333 WLTIIASPLFWILSKIES------VVHNWGVAIILLTVMIKLAFYPLSAASYRSMAHMRE 386
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
LAP+++ ++E+Y D++++Q+ LYK INP+ GCLP L IPV+I LY L +
Sbjct: 387 LAPRLQRLKEQYGDDRQKMQVAMMELYKTEKINPMGGCLPILVQIPVFISLYWVLLG-SV 445
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E WI L+ +D Y VLP+L+ +
Sbjct: 446 EMRHAPFMLWIHDLSA-------------------ID-----------PYYVLPILMGAT 475
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
IIQ+ N P + +P++ F P+GL LYW NN+LS AQQ
Sbjct: 476 M-----IIQTRLNPTPTDPVQAKVMMIMPIVFSVFFFFFPAGLVLYWLVNNVLSIAQQ 528
>gi|152980131|ref|YP_001355384.1| preprotein translocase YidC subunit [Janthinobacterium sp.
Marseille]
gi|166975871|sp|A6T4D7.1|YIDC_JANMA RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|151280208|gb|ABR88618.1| preprotein translocase YidC subunit [Janthinobacterium sp.
Marseille]
Length = 564
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 103/210 (49%), Gaps = 24/210 (11%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+ I++LT+++K A FPL+ S M+ + P++ I+ +Y G+ +++ LYK
Sbjct: 368 WGWTIVVLTIVIKLAFFPLSAASYRSMAKMKLVTPKMTEIRTKYKGEPQKMNAAMMELYK 427
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GC+P + IPV+I LY L +A + + WI LA P T+ GS
Sbjct: 428 KEKINPLGGCMPIVIQIPVFISLYWVL--LASVEMRNAPWLWISDLASPDTLF----GSY 481
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+ F G +LP+L+ +S +I K+ N P + F+
Sbjct: 482 MIGSFHLTIG-------------ILPILMAISMFIQTKL-----NPTPPDPIQAKVMMFM 523
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
P+ P+GL LYW NN+LS AQQ
Sbjct: 524 PIAFSLMFFFFPAGLVLYWVVNNILSIAQQ 553
>gi|75677253|ref|YP_319674.1| inner membrane protein translocase component YidC [Nitrobacter
winogradskyi Nb-255]
gi|74422123|gb|ABA06322.1| protein translocase subunit yidC [Nitrobacter winogradskyi Nb-255]
Length = 614
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 120/248 (48%), Gaps = 17/248 (6%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W IT M L HV +G +I+++TV++K FPL + S M++
Sbjct: 361 WFYFITKPMFLALDFF------FHVFGNFGVSILVVTVLIKLVFFPLANRSYASMAKMKA 414
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
+ PQ+ A++E Y D+ ++Q E +YK INP++GCLP L IPV+ LY+ L V
Sbjct: 415 IQPQINALRELYPDDRMKLQQEMMEIYKKEKINPISGCLPVLLQIPVFFSLYKVLF-VTI 473
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E F WI L+ P + + L P+ PL A P+++ V+
Sbjct: 474 EMRHAPFFAWIKDLSAPDP----THIFNLFGLLPYDPSVVPLI-GPYLAIGAWPIIMGVT 528
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
+ +K+ N P + + + +++P++ + + P+GL +YW NN LS QQ +
Sbjct: 529 MWFQMKL-----NPTPPDPTQKIIFDWMPVIFTFMLAAFPAGLVIYWAWNNTLSVIQQSY 583
Query: 333 LQKFGGAK 340
+ + G K
Sbjct: 584 IMRRNGVK 591
>gi|386811365|ref|ZP_10098591.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386406089|dbj|GAB61472.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 565
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 120/237 (50%), Gaps = 23/237 (9%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
WL+ I+ + L + + YG +II+LT+++K FPLTKK S M+
Sbjct: 338 WLNAISKALLAFLNAVHRVLPN------YGLSIIVLTILIKMILFPLTKKSQVSMFRMQQ 391
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P + ++E+Y D++R+ E L+K G NP++GCLP + +PV+ L+R L ++
Sbjct: 392 LQPMINQLKEKYKHDKQRMGKEQMLLFKKYGANPMSGCLPMVLQLPVFFALFRTL-QLSF 450
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E WI L+ P T+ + + PF+ A +LP+++ +
Sbjct: 451 EMRQAPFVLWINDLSRPDTLMT------LPFTIPFIGN----------ALNILPLVMTGA 494
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
++ +K + DP ++ Q + +F+P+M + ++PSGL+LYW + + S +
Sbjct: 495 SFVQMKTTPKAPAADPQAQAQQKMMSFMPIMFAFILYNMPSGLTLYWTVSTVFSIIE 551
>gi|357412377|ref|YP_004924113.1| insertase [Streptomyces flavogriseus ATCC 33331]
gi|320009746|gb|ADW04596.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces
flavogriseus ATCC 33331]
Length = 418
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 118/227 (51%), Gaps = 20/227 (8%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L V+++ PL KQ++S+ M+ L P++KAIQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQVLQPKMKAIQERYKNDKQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ-N 237
YK G NPL+ CLP LA P + LY LS +A I + P +ARQ +
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLSAIASGKT-------IGVIDQPLLDSARQAH 148
Query: 238 GSGISWLFPFVDGH---PPLGWSDTFAYLVLPVLLVV---SQYISVKIIQSSQNND---- 287
G F+D LG S T +V +++V+ SQ+ + + + ++N D
Sbjct: 149 IFGAPLAAKFMDSEEKVSALGASLTDVRVVTAIMIVMMSASQFFTQRQLM-TKNVDLTVK 207
Query: 288 -PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P++ ++ P G+ +YW T N+ + QQ+++
Sbjct: 208 TPYMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTNVWTMGQQMYV 254
>gi|335041642|ref|ZP_08534669.1| preprotein translocase subunit YidC [Methylophaga
aminisulfidivorans MP]
gi|333788256|gb|EGL54138.1| preprotein translocase subunit YidC [Methylophaga
aminisulfidivorans MP]
Length = 548
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 99/215 (46%), Gaps = 36/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++I+LLTV++K F L+ S AMR L P++ +++ERY D+++ LY+
Sbjct: 365 WGWSIVLLTVLIKLVFFKLSAASYRSMAAMRKLTPKLASLKERYGDDKQKFNQAMMDLYR 424
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L +PV++ Y L +I RQ
Sbjct: 425 TEKINPLGGCLPILVQMPVFLSFYWVLVE---------------------SIELRQ-ADF 462
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I W+ P Y +LPVL +S + Q + N P + + F
Sbjct: 463 ILWINDLTAMDP---------YFILPVLFGISMWF-----QQTLNPAPQDPAQAMMMKFF 508
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F PSGL LYW NN+LS AQQ ++ +
Sbjct: 509 PLVFTVFFAFFPSGLVLYWVVNNVLSIAQQWYITR 543
>gi|452963741|gb|EME68800.1| membrane protein insertase [Magnetospirillum sp. SO-1]
Length = 577
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 130/278 (46%), Gaps = 36/278 (12%)
Query: 54 NSADGVKELLGVAERLLFTLADAAVSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMS 113
A V L G AE+L D A+ + W +T +L++L +
Sbjct: 325 TGAKQVALLDGYAEKLGIDRFDLAI-----------DFGWFYFLTKPFFYLLQMLHTALG 373
Query: 114 TLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQL 173
+ G AI+ LTV++K A FPL K + M+ L P+V+ +Q RYA D+ R+Q
Sbjct: 374 NM------GLAILALTVVLKLAMFPLANKSYMAMGKMKKLQPRVQELQARYADDKMRLQQ 427
Query: 174 ETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIA 233
E LYK +NP++GCLP L IPV+ LY+ L V E + WI L+
Sbjct: 428 EMMALYKAEKVNPVSGCLPILIQIPVFFALYKVLF-VTIEMRHAPFYGWISDLSA----- 481
Query: 234 ARQNGSGISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKS 292
Q+ + I L + PP +F +L + P+++ V+ ++ K+ N P
Sbjct: 482 --QDPTNIFTLLGLIPWTPP-----SFMHLGIWPLIMGVTMWLQQKL-----NPQPTDPV 529
Query: 293 SQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+ +FLP++ + + SGL +YW +N LS QQ
Sbjct: 530 QAKMMSFLPIVFTFLLANFASGLVIYWAWSNALSILQQ 567
>gi|347736302|ref|ZP_08868977.1| 60 kDa inner membrane insertion protein [Azospirillum amazonense
Y2]
gi|346920253|gb|EGY01431.1| 60 kDa inner membrane insertion protein [Azospirillum amazonense
Y2]
Length = 498
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 115/221 (52%), Gaps = 18/221 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G I+L T+ ++ FPL +KQ S+ M+ L PQV+AI++R D+++ +E LYK
Sbjct: 293 FGLGIMLFTICLRTLMFPLAQKQFRSAAKMKKLQPQVEAIRKRAGDDKQKASIEMMALYK 352
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NP+ GCLP L +P++ LY+ LS V E F WI L+ P + +
Sbjct: 353 KEGANPMTGCLPVLIQMPIFWSLYKVLS-VTIEMRHAPFFGWIHDLSAP-------DPTS 404
Query: 241 ISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
+ LF + PP F +L V P+LL + ++ K+ + DP + Q +
Sbjct: 405 LFNLFGLLPFAPP-----AFLHLGVWPILLGCTMFLLQKMT-PTPGMDP---TQQKVMMT 455
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+PL+ + S+P+GL +Y+ +NL S QQ L + G K
Sbjct: 456 MPLVFTWMMGSLPAGLVIYYVWSNLFSVTQQYVLMRRMGVK 496
>gi|84394512|ref|ZP_00993222.1| putative inner membrane protein translocase component YidC [Vibrio
splendidus 12B01]
gi|84374865|gb|EAP91802.1| putative inner membrane protein translocase component YidC [Vibrio
splendidus 12B01]
Length = 540
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 116/244 (47%), Gaps = 43/244 (17%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
WL I + T+L ++ + +G AII LT IV+ A +PLTK Q S MR
Sbjct: 329 WLWFIAKPLHTLLSFIQG------IVVNWGLAIICLTFIVRGAMYPLTKAQYTSMAKMRM 382
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P++ A++ER D++R+ E LYK +NPL GCLP + +P++I LY AL +
Sbjct: 383 LQPKLTAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPIILQMPIFISLYWALMESVE 442
Query: 213 EGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVV 271
L FF WI L+ Y +LP+L+
Sbjct: 443 --LRHSPFFGWITDLSAQD------------------------------PYYILPLLMGA 470
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
S ++ ++ + + DP Q + F+P+M +F L PSGL LYW +N+++ QQ
Sbjct: 471 SMFL-IQKMSPTTVTDP---MQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQT 526
Query: 332 WLQK 335
+ +
Sbjct: 527 LIYR 530
>gi|146337896|ref|YP_001202944.1| inner membrane protein translocase component YidC [Bradyrhizobium
sp. ORS 278]
gi|146190702|emb|CAL74706.1| Inner membrane protein oxaA [Bradyrhizobium sp. ORS 278]
Length = 622
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 111/217 (51%), Gaps = 11/217 (5%)
Query: 124 AIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAG 183
+I+L+TV+VK A PL K S M+++ PQ++A++ERY D+ + Q E +YK
Sbjct: 401 SILLVTVLVKLAFLPLANKSYASMAKMKAIQPQLQALKERYPDDRMKQQQEMMEIYKKEK 460
Query: 184 INPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISW 243
INP+AGCLP + IPV+ LY+ L V E WI L+ P N +
Sbjct: 461 INPVAGCLPVVLQIPVFFSLYKVLF-VTIEMRHAPFIGWIKDLSAPDP----TNLFTLFG 515
Query: 244 LFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLM 303
L PF PL + A + P+++ ++ + +K+ N P + + N++PL+
Sbjct: 516 LIPFDPTQLPL-FGHYLALGIWPIIMGITMWFQMKL-----NPAPPDPTQAMIFNWMPLI 569
Query: 304 IGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+ P+GL +YW NN LS QQ ++ + G K
Sbjct: 570 FTFMLAGFPAGLVIYWAWNNTLSVLQQSFIMRRNGVK 606
>gi|51473293|ref|YP_067050.1| inner membrane protein translocase component YidC [Rickettsia typhi
str. Wilmington]
gi|383752069|ref|YP_005427169.1| membrane protein insertase [Rickettsia typhi str. TH1527]
gi|383842904|ref|YP_005423407.1| membrane protein insertase [Rickettsia typhi str. B9991CWPP]
gi|81692326|sp|Q68XS4.1|YIDC_RICTY RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|51459605|gb|AAU03568.1| 60 kDa inner membrane protein [Rickettsia typhi str. Wilmington]
gi|380758712|gb|AFE53947.1| membrane protein insertase [Rickettsia typhi str. TH1527]
gi|380759551|gb|AFE54785.1| membrane protein insertase [Rickettsia typhi str. B9991CWPP]
Length = 558
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 115/222 (51%), Gaps = 27/222 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L K S M++L P++ I+ Y D+ R+ E LYK
Sbjct: 359 FGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYNNDKARLNQEIMALYK 418
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
+ +NP+AGCLP L IPV+ +Y+ L V E + WI L+ PTTI N
Sbjct: 419 KSKVNPVAGCLPILVQIPVFFSIYKVLY-VTIEMRHAPFYGWIKDLSSPDPTTIF---NL 474
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G L PF PP ++L++ P+L+ ++ ++ K+ S + DP
Sbjct: 475 FG---LLPFA---PP-------SFLMIGAWPILMAITMFLHQKM--SPELADP---IQAQ 516
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
+ F+PL+ + S P GL +YW NN+LS QQ ++ KF
Sbjct: 517 VMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQQYYINKFN 558
>gi|17984422|gb|AAL53516.1| 60 kDa inner membrane protein yidc [Brucella melitensis bv. 1 str.
16M]
Length = 588
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 110/221 (49%), Gaps = 19/221 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+++TV++KA FPL K +S M+ + P++ I+E+YA D+ + Q LYK
Sbjct: 366 FGVAILVVTVLLKALFFPLANKSYKSMARMKLMQPKMTEIREKYADDKMKQQQAMMELYK 425
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPLAGC P L IPV+ LY+ L V E F WI LA P + N G
Sbjct: 426 REKINPLAGCWPVLVQIPVFFALYKVLY-VTIEMRHAPFFGWIQDLAAPDPTSIF-NLFG 483
Query: 241 ISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
L P+ H F + V P+++ + + +Q N P + A+ +
Sbjct: 484 ---LLPYTVPH--------FLMIGVWPIIMGI-----IMFLQMRMNPTPPDPTQAAIFTW 527
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+P++ + S P+GL +YW NN LS QQ + K G K
Sbjct: 528 MPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVK 568
>gi|84499797|ref|ZP_00998085.1| putative inner membrane protein translocase component YidC
[Oceanicola batsensis HTCC2597]
gi|84392941|gb|EAQ05152.1| putative inner membrane protein translocase component YidC
[Oceanicola batsensis HTCC2597]
Length = 608
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 123/254 (48%), Gaps = 29/254 (11%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W +T + VL L + + G++II LTV++K FPL K S MR
Sbjct: 358 WFFFLTKPIFAVLHWLNSHIGNM------GWSIIALTVLLKMVLFPLAYKSYASMAKMRE 411
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+++ I+ER D++++Q E LYK +NP +GCLP L IP++ LY+ + V
Sbjct: 412 LQPEMEKIKERAGDDRQKLQKEMMELYKKEKVNPASGCLPILLQIPIFFSLYKVIF-VTL 470
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYL------VLP 266
E WI L+ P + S I LF G P+ D ++L VLP
Sbjct: 471 ELRHAPWIGWIHDLSAP-------DPSSILNLF----GLLPIATPDPDSFLAIISLGVLP 519
Query: 267 VLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLS 326
+LL VS ++ K+ N P + Q + ++P + + + SGL LYW TNN+++
Sbjct: 520 ILLGVSMWLQQKL-----NPAPTDPTQQMIFAWMPWVFMFMLGTFASGLVLYWITNNVIT 574
Query: 327 TAQQVWLQKFGGAK 340
QQ + + G K
Sbjct: 575 FMQQYAIMRSHGFK 588
>gi|255016877|ref|ZP_05289003.1| SpoIIIJ protein [Listeria monocytogenes FSL F2-515]
Length = 297
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 129/259 (49%), Gaps = 42/259 (16%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGD----QERIQLET 175
+Y II++T++++ PL KQ++S AM +L P++K +QE+Y+ ++++Q ET
Sbjct: 64 SYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQET 123
Query: 176 ARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAAR 235
RLY+ +NP+ GCLP L +P+ +G Y+A+S A+ + T+ F W+
Sbjct: 124 MRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDSFLWMQL---------- 171
Query: 236 QNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G+P Y +LPV+ ++ ++S KI Q KS
Sbjct: 172 --------------GNPD-------PYYILPVVAALTTFLSSKISMMGQTQQN--KSMAM 208
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK-FGGAKDPMKQFSDIIKDER 354
+ +P+MI + +++PS L+LYW N+ + Q + + F ++ + + ++R
Sbjct: 209 IVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQVAEDR 268
Query: 355 LDINKSVPGLSSTKKEARQ 373
L K + ++KK R+
Sbjct: 269 LK--KKAANMKASKKGVRK 285
>gi|254509058|ref|ZP_05121161.1| inner membrane protein, 60 kDa [Vibrio parahaemolyticus 16]
gi|219547991|gb|EED25013.1| inner membrane protein, 60 kDa [Vibrio parahaemolyticus 16]
Length = 448
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 117/244 (47%), Gaps = 43/244 (17%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
WL I + ++L ++ + +G AII LT IV+ A +PLTK Q S MR
Sbjct: 237 WLWFIAKPLHSLLSFIQSFVGN------WGVAIICLTFIVRGAMYPLTKAQYTSMAKMRM 290
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+++A++ER D++R+ E LYK +NPL GCLP + +P++I LY AL +
Sbjct: 291 LQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVE 350
Query: 213 EGLLTEGFF-WIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVV 271
L FF WI L+ Y +LP+L+
Sbjct: 351 --LRHSPFFGWIHDLSAQD------------------------------PYYILPLLMGA 378
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQV 331
S ++ ++ + + DP Q + F+P+M +F L PSGL LYW +N+++ QQ
Sbjct: 379 SMFL-IQKMSPTTVTDP---MQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQT 434
Query: 332 WLQK 335
+ K
Sbjct: 435 LIYK 438
>gi|395225822|ref|ZP_10404334.1| membrane protein insertase, YidC/Oxa1 family [Thiovulum sp. ES]
gi|394445996|gb|EJF06851.1| membrane protein insertase, YidC/Oxa1 family [Thiovulum sp. ES]
Length = 528
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 120/248 (48%), Gaps = 47/248 (18%)
Query: 97 ITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQ 156
IT + E + +LK+ + +G+AI+ +T++++ +PLT K + S ++ +AP+
Sbjct: 313 ITLIAEPIFYILKEFYAIFG---NWGWAIVAMTLLIRLFLYPLTYKGMLSMQKLKEIAPE 369
Query: 157 VKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLL 216
+K +Q +Y G+ +++Q + LYK G NP+ GC P L IP++ +YR L N +
Sbjct: 370 MKELQRKYKGNPQQLQAKMMELYKKRGANPIGGCFPLLLQIPIFFAIYRVLVNAVEL--- 426
Query: 217 TEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFA----YLVLPVLLVVS 272
G W+ W D A Y +LP+L+ S
Sbjct: 427 ----------------------QGAEWIL----------WVDDLAKMDPYFILPILMGAS 454
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
+ + + S DP + + FLP++ +F ++ P+GL+LYWF NNL S QQ +
Sbjct: 455 MFWQ-QHVTPSNFTDP---MQEKIFKFLPIIFTFFFITFPAGLTLYWFVNNLFSIGQQ-Y 509
Query: 333 LQKFGGAK 340
+ F AK
Sbjct: 510 IVNFQFAK 517
>gi|225077258|ref|ZP_03720457.1| hypothetical protein NEIFLAOT_02313 [Neisseria flavescens
NRL30031/H210]
gi|224951402|gb|EEG32611.1| hypothetical protein NEIFLAOT_02313 [Neisseria flavescens
NRL30031/H210]
Length = 548
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 100/214 (46%), Gaps = 44/214 (20%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AII+LT+IVKA +PLT S MR+ AP+++AI+E+Y D+ Q +LYK
Sbjct: 357 WGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDRMAQQQAMMQLYK 416
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+IGLY AL ++ RQ
Sbjct: 417 DEKINPLGGCLPMLLQIPVFIGLYWALF---------------------ASVELRQA--- 452
Query: 241 ISWLFPFVDGHPPLGWSDTFA----YLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
P LGW + + +LP+++ + + Q+ N P +
Sbjct: 453 -----------PWLGWITDLSRPDPFYILPLIMAATMF-----AQTFLNPPPTDPMQAKM 496
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ P+GL LYW NNLL+ QQ
Sbjct: 497 MKIMPLVFSVMFFFFPAGLVLYWVVNNLLTITQQ 530
>gi|114706827|ref|ZP_01439727.1| putative inner membrane transmembrane protein [Fulvimarina pelagi
HTCC2506]
gi|114537775|gb|EAU40899.1| putative inner membrane transmembrane protein [Fulvimarina pelagi
HTCC2506]
Length = 603
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 119/248 (47%), Gaps = 23/248 (9%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W IT M T L + + +G AI+ +TVI+K FPL K +S M++
Sbjct: 359 WFYFITRPMFTALDYIYRLVGN------FGIAILAVTVILKLIFFPLANKSYKSMARMKT 412
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
+ P+V ++ER+ D+++ Q E +LY+ INP AGC P L IPV+ LY+ L V
Sbjct: 413 IQPKVMELRERFKDDRQKQQQEMMQLYRSEKINPAAGCWPILIQIPVFFALYKVLY-VTI 471
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E F WI LA P + + I LF G P V P+L+ ++
Sbjct: 472 EMRHAPFFGWIQDLAAP-------DPTSIFNLF----GLLPYDVPGILLIGVWPLLMGLT 520
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
+I +++ N P + + ++P++ + + P+GL +YW NN LS QQ
Sbjct: 521 MFIQMRL-----NPTPPDPTQAMIFTWMPVVFTFMLATFPAGLVIYWTWNNFLSIIQQSV 575
Query: 333 LQKFGGAK 340
+ K GAK
Sbjct: 576 IMKRNGAK 583
>gi|422411250|ref|ZP_16488209.1| stage III sporulation protein J [Listeria innocua FSL S4-378]
gi|313621678|gb|EFR92461.1| stage III sporulation protein J [Listeria innocua FSL S4-378]
Length = 287
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 109/213 (51%), Gaps = 39/213 (18%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGD----QERIQLETA 176
Y II++T++++ PL KQ++S AM SL P++K +QE+Y+ ++++Q ET
Sbjct: 65 YAVGIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKIKELQEKYSSKDNETKQKLQQETM 124
Query: 177 RLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ 236
RLY+ +NP+ GCLP L +P+ +G Y+A+S A+ + T+ F W+
Sbjct: 125 RLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDSFLWMQL----------- 171
Query: 237 NGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
G+P Y +LP++ ++ ++S KI Q KS +
Sbjct: 172 -------------GNPD-------PYYILPIVAALTTFLSSKISMMGQTQQN--KSMAMI 209
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
+P+MI + +++PS L+LYW N+ + Q
Sbjct: 210 VYIMPVMILFMGITLPSALALYWIIGNIFTVFQ 242
>gi|403509438|ref|YP_006641076.1| membrane insertase, YidC/Oxa1 family domain protein [Nocardiopsis
alba ATCC BAA-2165]
gi|402798887|gb|AFR06297.1| membrane insertase, YidC/Oxa1 family domain protein [Nocardiopsis
alba ATCC BAA-2165]
Length = 312
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 137/262 (52%), Gaps = 31/262 (11%)
Query: 92 DWLSGITNVMETVLKVLKDGMSTLHV----PYAYGFAIILLTVIVKAATFPLTKKQVESS 147
DWL N++ VL + G++ + + +A+G +I+LLT +++ PL KQ+ +
Sbjct: 3 DWLY---NIIGHVLVWIHSGLTIVGLNPDSGWAWGLSIVLLTCLMRLLMVPLFVKQMNTQ 59
Query: 148 MAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRAL 207
M+ + P++ ++ERY D+ER+Q E+ +LY+ +G NP+ GCLP L +PV+ L+ L
Sbjct: 60 RKMQEVQPKIMKLRERYKHDKERLQRESMKLYQESGTNPIMGCLPLLLQMPVFFALFSVL 119
Query: 208 SNVADEGLLTEGFFW------IPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSD-TF 260
+VA EG + GF +L IAA+ N S + LG +D
Sbjct: 120 RSVA-EGKVQFGFTQELADSAREALIFHAPIAAQFNTSP--------EELRALGATDPIM 170
Query: 261 AYLVLPVLLVV-------SQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPS 313
A +V+ + VV + S+K + Q ++P M++ + + PL G F L +P
Sbjct: 171 AKIVIAIACVVMGTTTFLTMRQSIKRSMAQQPDNPMMQTQKIMMYMAPL-FGLFGLMMPI 229
Query: 314 GLSLYWFTNNLLSTAQQVWLQK 335
G+ +YW T+N+ + QQ +L +
Sbjct: 230 GVLVYWVTSNIWTMVQQHFLYR 251
>gi|47093230|ref|ZP_00231003.1| spoJ protein [Listeria monocytogenes str. 4b H7858]
gi|47018424|gb|EAL09184.1| spoJ protein [Listeria monocytogenes str. 4b H7858]
Length = 267
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 39/214 (18%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGD----QERIQLET 175
+Y II++T++++ PL KQ++S AM +L P++K +QE+Y+ ++++Q ET
Sbjct: 44 SYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQET 103
Query: 176 ARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAAR 235
RLY+ +NP+ GCLP L +P+ +G Y+A+S A+ + T+ F W+ L P
Sbjct: 104 MRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDSFLWM-QLGNPD----- 155
Query: 236 QNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
Y +LPV+ ++ ++S KI Q KS
Sbjct: 156 -------------------------PYYILPVVAALTTFLSSKISMMGQTQQN--KSMAM 188
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
+ +P+MI + +++PS L+LYW N+ + Q
Sbjct: 189 IVYIMPVMILFMGITLPSALALYWIIGNIFTVFQ 222
>gi|67458523|ref|YP_246147.1| inner membrane protein translocase component YidC [Rickettsia felis
URRWXCal2]
gi|75537010|sp|Q4UN76.1|YIDC_RICFE RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|67004056|gb|AAY60982.1| Preprotein translocase subunit YidC [Rickettsia felis URRWXCal2]
Length = 560
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 118/222 (53%), Gaps = 27/222 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L K S M++L P++ I+ Y+ D+ R+ E LYK
Sbjct: 361 FGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEIMALYK 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
+NP+AGCLP L IP++ +Y+ L V E + WI L+ PTTI N
Sbjct: 421 KEKVNPVAGCLPILVQIPLFFSIYKVLY-VTIEMRQVPFYGWIKDLSAPDPTTIF---NL 476
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G L PF PP ++L++ P+L+ ++ ++ K+ S + DP M++
Sbjct: 477 FG---LLPF---SPP-------SFLMIGAWPILMAITMFLQQKM--SPEPADP-MQAQ-- 518
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
+ F+PL+ + S P GL +YW NN+LS QQ ++ KF
Sbjct: 519 VMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQQYYINKFN 560
>gi|161511178|ref|NP_541252.2| inner membrane protein translocase component YidC [Brucella
melitensis bv. 1 str. 16M]
gi|260565068|ref|ZP_05835553.1| inner membrane protein oxaA [Brucella melitensis bv. 1 str. 16M]
gi|265990314|ref|ZP_06102871.1| inner membrane protein oxaA [Brucella melitensis bv. 1 str. Rev.1]
gi|38503114|sp|Q8YDA3.2|YIDC_BRUME RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|260152711|gb|EEW87804.1| inner membrane protein oxaA [Brucella melitensis bv. 1 str. 16M]
gi|263000983|gb|EEZ13673.1| inner membrane protein oxaA [Brucella melitensis bv. 1 str. Rev.1]
Length = 610
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 110/221 (49%), Gaps = 19/221 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+++TV++KA FPL K +S M+ + P++ I+E+YA D+ + Q LYK
Sbjct: 388 FGVAILVVTVLLKALFFPLANKSYKSMARMKLMQPKMTEIREKYADDKMKQQQAMMELYK 447
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPLAGC P L IPV+ LY+ L V E F WI LA P + N G
Sbjct: 448 REKINPLAGCWPVLVQIPVFFALYKVLY-VTIEMRHAPFFGWIQDLAAPDPTSIF-NLFG 505
Query: 241 ISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
L P+ H F + V P+++ + + +Q N P + A+ +
Sbjct: 506 ---LLPYTVPH--------FLMIGVWPIIMGI-----IMFLQMRMNPTPPDPTQAAIFTW 549
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+P++ + S P+GL +YW NN LS QQ + K G K
Sbjct: 550 MPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVK 590
>gi|209965568|ref|YP_002298483.1| hypothetical protein RC1_2283 [Rhodospirillum centenum SW]
gi|209959034|gb|ACI99670.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 602
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 117/218 (53%), Gaps = 23/218 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI++ TV+++ A FPL KQ ++ M+ L P+++ +++R+ D++++ + T LYK
Sbjct: 392 FGIAILVFTVLLRLAFFPLANKQYKAFAKMKLLQPKMEELRKRHGDDRQKLSMATMELYK 451
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPL+GCLP L IPV+ LY+ L V E + WI L+ P + +
Sbjct: 452 QEKVNPLSGCLPILLQIPVFFALYKVLF-VTIEMRHAPFYGWITDLSAP-------DPTT 503
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLV---LPVLLVVSQYISVKIIQSSQNNDPNMKSSQALT 297
+ LF + PP +L+ LP+++ + ++ KI S N DP Q +
Sbjct: 504 VFNLFGLIPWSPP-------GFLMVGALPLMMGFTMWLQQKI--SPANPDP---IQQRIF 551
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
LP + Y + P+GL +YW +NLL+ AQQ ++ +
Sbjct: 552 MVLPFLFTYMMAAFPAGLVIYWTWSNLLAIAQQWYIMR 589
>gi|414165116|ref|ZP_11421363.1| inner membrane protein oxaA [Afipia felis ATCC 53690]
gi|410882896|gb|EKS30736.1| inner membrane protein oxaA [Afipia felis ATCC 53690]
Length = 611
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 115/229 (50%), Gaps = 29/229 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+L+TVIVKA FPL K S M+++ PQ+ A++E+Y D+ + Q E +YK
Sbjct: 385 FGIAILLVTVIVKAIFFPLANKSYASMAKMKAVQPQLAALKEKYPDDKMKQQQEMMEIYK 444
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INP+AGCLP IPV+ LY+ L + E F WI L+ P N G
Sbjct: 445 KEKINPIAGCLPIAIQIPVFFALYKVLF-ITIEMRHAPFFGWIHDLSAPDPTHVF-NLFG 502
Query: 241 ISWLFPF------VDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMK 291
L P+ V GH YL + P+++ V+ + +K+ N P
Sbjct: 503 ---LLPYDPSAVPVIGH----------YLAIGAWPLIMGVTMWFQMKL-----NPAPPDP 544
Query: 292 SSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+ + + +++P++ + S P+GL +YW NN LS QQ + K G K
Sbjct: 545 TQKMIFDWMPVIFTFMLASFPAGLVIYWAWNNTLSVLQQSAIMKKNGVK 593
>gi|134096616|ref|YP_001101691.1| preprotein translocase membrane subunit [Herminiimonas
arsenicoxydans]
gi|166975870|sp|A4GAN3.1|YIDC_HERAR RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|133740519|emb|CAL63570.1| Inner membrane protein OxaA [Herminiimonas arsenicoxydans]
Length = 569
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 106/221 (47%), Gaps = 25/221 (11%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+ II+LT+++K A FPL+ S M+ + P++ I+ RY G+ +++ LYK
Sbjct: 370 WGWTIIVLTIVIKLAFFPLSAAGYRSMAKMKLVTPKMTDIRTRYKGEPQKMNAAMMELYK 429
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INP+ GC P L IPV+I LY L +A + + WI LA P + +
Sbjct: 430 KEKINPIGGCFPMLVQIPVFISLYWVL--LASVEIRNASWLWIHDLAAPDILFGSYHIGT 487
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
H +G +LP+L+ +S +I K+ N P + F+
Sbjct: 488 F---------HLTIG--------ILPILMAISMFIQTKL-----NPTPPDPIQAKVMMFM 525
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAK 340
P+ P+GL LYW NN+LS AQQ ++ +K G K
Sbjct: 526 PIAFSVMFFFFPAGLVLYWVVNNILSIAQQWFINEKLLGGK 566
>gi|189501692|ref|YP_001957409.1| inner membrane protein translocase component YidC [Candidatus
Amoebophilus asiaticus 5a2]
gi|254772744|sp|B3ER28.1|YIDC_AMOA5 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|189497133|gb|ACE05680.1| hypothetical protein Aasi_0237 [Candidatus Amoebophilus asiaticus
5a2]
Length = 596
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 25/218 (11%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG I++L + +K PL+ K S M+ L P + A++ +Y D + +Q+E +LY+
Sbjct: 359 YGLVILILVIFIKLLLLPLSYKSYISMAEMKVLKPTLDALKAKYGNDMQSVQMEQVKLYR 418
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
GINPL+GC+P L +P+ + ++ N D L + F W P L+ I
Sbjct: 419 EMGINPLSGCIPVLLQMPILLAMFNFFPNAID--LRQKAFLWAPDLSTYDAII------N 470
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPN--MKSSQALTN 298
+ + PF H + L LL+ + I + S+Q N P MK+ L
Sbjct: 471 LPFQIPFYGSH-----------VSLFTLLMTASTI-LYTWSSNQVNTPQGPMKTMSYL-- 516
Query: 299 FLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKF 336
LP+ + S P+GLS Y+F +NL + AQQ +++F
Sbjct: 517 -LPITFMFILNSFPAGLSFYYFVSNLFTFAQQALIKRF 553
>gi|323143418|ref|ZP_08078103.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
[Succinatimonas hippei YIT 12066]
gi|322416823|gb|EFY07472.1| membrane protein insertase, YidC/Oxa1 family domain protein
[Succinatimonas hippei YIT 12066]
Length = 548
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 104/217 (47%), Gaps = 39/217 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+GF+II+LT++V++ FPLTK Q S MR L P+++ ++ERY D++++ ET RLYK
Sbjct: 353 WGFSIIVLTLVVRSVLFPLTKAQYTSMAKMRLLTPKMQELRERYKDDRQKLGQETMRLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF--WIPSLAGPTTIAARQNG 238
+NPL GC P L +P++I LY L + L F WI L+
Sbjct: 413 TEKVNPLGGCFPLLIQMPIFIALYWTLMESTE---LRHAPFIGWIADLS----------- 458
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTN 298
H P Y V P+L V+ Y K+ + + K A
Sbjct: 459 -----------VHDP--------YFVTPLLYGVTMYFIQKMSPTPITDPMQRKVMMA--- 496
Query: 299 FLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+P + + + P+GL+LYW +N + QQ+ + K
Sbjct: 497 -MPFVFTFMFCTFPAGLTLYWLVSNCFTIFQQIIIYK 532
>gi|56420357|ref|YP_147675.1| stage III sporulation protein J [Geobacillus kaustophilus HTA426]
gi|56380199|dbj|BAD76107.1| stage III sporulation protein J [Geobacillus kaustophilus HTA426]
Length = 249
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 107/218 (49%), Gaps = 39/218 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGD----QERIQLETA 176
YG AII+LT+IV+ PL KQ +S+AM+ L P++ +QE+Y Q ++Q E
Sbjct: 55 YGIAIIVLTLIVRFCLLPLILKQFRASLAMQKLRPELLKLQEKYKSKDPETQRKLQQEMM 114
Query: 177 RLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ 236
+LY+ G+NP +GCLP L +P+++ LY A+S + + T F W+
Sbjct: 115 QLYQKHGVNPASGCLPVLIQMPIFMALYYAISRTQE--IKTHSFLWV------------- 159
Query: 237 NGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
LG D Y +LPVL ++ +IS+++ S + M +
Sbjct: 160 ----------------ELGHRD--PYFILPVLAALTTFISLRL--SPSMAEEQMPQMAMM 199
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
+P+MI A SVPS LSLYW S Q + L+
Sbjct: 200 LYIMPVMIFIGASSVPSALSLYWVVGGCFSIIQSLILR 237
>gi|365886437|ref|ZP_09425365.1| fragment of Inner membrane protein oxaA (part 2) [Bradyrhizobium
sp. STM 3809]
gi|365338054|emb|CCD97896.1| fragment of Inner membrane protein oxaA (part 2) [Bradyrhizobium
sp. STM 3809]
Length = 543
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 114/220 (51%), Gaps = 17/220 (7%)
Query: 124 AIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAG 183
+I+L+TV+VK A FPL K S M+++ PQ++A++ERY D+ + Q E +YK
Sbjct: 322 SILLVTVLVKLAFFPLANKSYASMAKMKAIQPQLQALKERYPDDRMKQQQEMMEIYKKEK 381
Query: 184 INPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISW 243
INP+AGCLP + IPV+ LY+ L V E WI L+ P + + +
Sbjct: 382 INPVAGCLPVVLQIPVFFSLYKVLF-VTIEMRHAPFIGWIKDLSAP-------DPTNLFT 433
Query: 244 LFPFVDGHP---PLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
LF + P PL + A + P+++ ++ + +K+ N P + + N++
Sbjct: 434 LFGLLHFDPTQLPL-FGHYLALGIWPIIMGITMWFQMKL-----NPTPPDPAQAMIFNWM 487
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
PL+ + P+GL +YW NN LS QQ ++ + G K
Sbjct: 488 PLIFTFMLAGFPAGLVIYWAWNNTLSVLQQSFIMRRNGVK 527
>gi|16802044|ref|NP_472312.1| hypothetical protein lin2986 [Listeria innocua Clip11262]
gi|38503122|sp|Q926Q5.1|YIDC2_LISIN RecName: Full=Membrane protein insertase YidC 2; AltName:
Full=Foldase YidC 2; AltName: Full=Membrane integrase
YidC 2; AltName: Full=Membrane protein YidC 2; Flags:
Precursor
gi|16415526|emb|CAC98211.1| lin2986 [Listeria innocua Clip11262]
Length = 287
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 129/258 (50%), Gaps = 42/258 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGD----QERIQLETA 176
Y II++T++++ PL KQ++S AM SL P++K +QE+Y+ ++++Q ET
Sbjct: 65 YAVGIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKIKELQEKYSSKDNETKQKLQQETM 124
Query: 177 RLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ 236
RLY+ +NP+ GCLP L +P+ +G Y+A+S A+ + T+ F W+
Sbjct: 125 RLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDTFLWMQL----------- 171
Query: 237 NGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
G+P Y +LP++ ++ ++S KI Q KS +
Sbjct: 172 -------------GNPD-------PYYILPIVAALTTFLSSKISMMGQTQQN--KSMAMI 209
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK-FGGAKDPMKQFSDIIKDERL 355
+P+MI + +++PS L+LYW N+ + Q + + F ++ + +++ERL
Sbjct: 210 VYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQLEEERL 269
Query: 356 DINKSVPGLSSTKKEARQ 373
K + ++KK ++
Sbjct: 270 --KKKAANMKASKKGGKK 285
>gi|379711815|ref|YP_005300154.1| membrane protein insertase [Rickettsia philipii str. 364D]
gi|376328460|gb|AFB25697.1| membrane protein insertase [Rickettsia philipii str. 364D]
Length = 560
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 118/222 (53%), Gaps = 27/222 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L K S M++L P++ I+ Y+ D+ R+ E LYK
Sbjct: 361 FGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKILYSDDKARLNQEIMALYK 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
+NP+AGCLP L IPV+ +Y+ L V E + WI L+ PTTI N
Sbjct: 421 KEKVNPVAGCLPILVQIPVFFSIYKVLY-VTIEMRQAPFYGWIKDLSAPDPTTIF---NL 476
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G L PF PP ++L++ P+L+ ++ ++ K+ S + DP M++
Sbjct: 477 FG---LLPFA---PP-------SFLMIGAWPILMAITMFLQQKM--SPEPADP-MQAQ-- 518
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
+ F+PL+ + S P GL +YW NN+LS QQ ++ KF
Sbjct: 519 VMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQQYYINKFN 560
>gi|29830855|ref|NP_825489.1| putative inner membrane protein translocase component YidC
[Streptomyces avermitilis MA-4680]
gi|34098400|sp|P59811.1|YIDC_STRAW RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|29607968|dbj|BAC72024.1| putative preprotein translocase YidC subunit [Streptomyces
avermitilis MA-4680]
Length = 428
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 117/232 (50%), Gaps = 30/232 (12%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L ++++ PL KQ++++ AM++L P++K IQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDKQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVA--------DEGLLTEG----FFWIPSL 226
YK +G NPL+ CLP LA P + LY L+ +A D+ LL F P
Sbjct: 96 YKESGTNPLSSCLPILAQSPFFFALYHVLNGIATGKTIGVIDDQLLASARKAHIFGAPLA 155
Query: 227 AGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNN 286
A T A + G + + V ++ VL+ SQ+ + + + ++N
Sbjct: 156 AKFTDSADKVTQLGATLMDVRV------------VTAIMIVLMSASQFYTQRQLM-TKNV 202
Query: 287 D-----PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
D P M+ + L P+M F ++ P G+ +YW T N+ + QQ+++
Sbjct: 203 DTTVKTPFMQQQKMLMYVFPVMFAIFGINFPVGVLVYWLTTNVWTMGQQMYV 254
>gi|402835644|ref|ZP_10884207.1| 60Kd inner membrane protein [Mogibacterium sp. CM50]
gi|402273926|gb|EJU23116.1| 60Kd inner membrane protein [Mogibacterium sp. CM50]
Length = 249
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 45/229 (19%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG ++I+LTV+VK +PL KQ++S+ +M +L P++KA+QE+Y D+E++ E +LY+
Sbjct: 22 YGISLIILTVLVKLILYPLYFKQIKSTASMSTLQPKMKALQEKYKNDKEKLNEEMTKLYR 81
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSN----VADEGLL---TEGFFWIPSLAGPTTIA 233
NP+ GCLP L P+ +GL+ L N +AD+ +L + F WI L
Sbjct: 82 EEKFNPMGGCLPMLIQFPIIMGLFTLLRNPMKYIADDKMLFAVHQSFLWIKDL------- 134
Query: 234 ARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSS 293
G P L W +LP+ ++ Y S + Q + +M
Sbjct: 135 ----------------GQPDL-W-------ILPIAAAIATYFSFAMTQQLTGQN-DMMGG 169
Query: 294 QA------LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKF 336
QA + F PL I + A S P+GL++YW L + + K+
Sbjct: 170 QAKSMNLVMKYFFPLSILWLARSYPAGLAIYWAGGQFLQIFLNIRMNKY 218
>gi|117929365|ref|YP_873916.1| 60 kDa inner membrane insertion protein [Acidothermus
cellulolyticus 11B]
gi|117649828|gb|ABK53930.1| 60 kDa inner membrane insertion protein [Acidothermus
cellulolyticus 11B]
Length = 315
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 121/236 (51%), Gaps = 18/236 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +++LLTVIV+ FPL KQV S AM LAP++K +Q +Y D+ER+ ET LY+
Sbjct: 35 WGLSVVLLTVIVRILLFPLFVKQVRSQRAMTELAPKLKELQAKYKNDRERLGTETMALYR 94
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLT--EGFF----WIPSL---AGPTT 231
G+NP GCLP LA PV+ L+ L V+D G GF W SL AG
Sbjct: 95 EHGVNPFMGCLPILAQAPVFYALFHVLRYVSDHGSSKPPAGFHPEYGWTVSLLQSAG--- 151
Query: 232 IAARQNGSGISWLFPFVDGHPPLGWSDTFAYLV--LPVL-LVVSQYISVK--IIQSSQNN 286
A+ G ++ F D P G T ++V L +L + + +++ + I++++
Sbjct: 152 -HAKVFGVPLALGFRTADRAPMFGADSTTVHVVTLLAILAMATTTFLTQRQLIVKNAAAG 210
Query: 287 DPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDP 342
+P + + L LP + L G+ +YW T+NL S QQ ++ + K P
Sbjct: 211 NPMAQQQKMLLYVLPPIFALSGLLWQMGVLVYWVTSNLWSLGQQHYIIRTMPIKGP 266
>gi|408530733|emb|CCK28907.1| Membrane protein oxaA [Streptomyces davawensis JCM 4913]
Length = 418
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 120/229 (52%), Gaps = 24/229 (10%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L ++++ PL KQ++++ AM++L P++K IQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDKQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADE---GLLTEGFFWIPSLAGPTTIAAR 235
YK G NPL+ CLP LA P + LY L+++A+ G++ + A +
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLNSIANNEKVGVINDRLL---------ESAQQ 146
Query: 236 QNGSGISWLFPFVDGHP---PLGWSDTFAYLVLPVLLVV---SQYISVKIIQSSQNND-- 287
+ G F D LG + T +V +++++ SQ+ + + + ++N D
Sbjct: 147 AHIFGAPLASKFTDSAAKVEALGSTITDVRVVTAIMIILMSASQFYTQRQLM-TKNVDTT 205
Query: 288 ---PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P+M F ++ P G+ +YW T N+ + QQ+++
Sbjct: 206 VKTPFMQQQKMLMYIFPVMFAVFGINFPVGVLVYWLTTNVWTMGQQMYV 254
>gi|402702809|ref|ZP_10850788.1| membrane protein insertase [Rickettsia helvetica C9P9]
Length = 560
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 118/222 (53%), Gaps = 27/222 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L K S M++L P++ I+ Y+ D+ R+ E LYK
Sbjct: 361 FGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEIMALYK 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
+NP+AGCLP L IPV+ +Y+ L V E + WI L+ PTTI N
Sbjct: 421 KEKVNPVAGCLPILVQIPVFFSIYKVLY-VTIEMRQAPFYGWIKDLSAPDPTTIF---NL 476
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G L PF PP ++L++ P+L+ ++ ++ K+ S + DP M++
Sbjct: 477 FG---LLPF---SPP-------SFLMIGAWPILMAITMFLQQKM--SPEPVDP-MQAQ-- 518
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
+ F+PL+ + + P GL +YW NN+LS QQ ++ KF
Sbjct: 519 VMKFMPLIFLFMFNNFPVGLLIYWSWNNILSIIQQYYINKFN 560
>gi|296535613|ref|ZP_06897793.1| inner membrane protein OxaA, partial [Roseomonas cervicalis ATCC
49957]
gi|296264068|gb|EFH10513.1| inner membrane protein OxaA [Roseomonas cervicalis ATCC 49957]
Length = 524
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 106/215 (49%), Gaps = 17/215 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI++ TV +K A FPL K +S M+ L P+++ I+ERY D + Q E LY+
Sbjct: 306 FGIAILVFTVALKLAFFPLANKAYKSMARMKVLTPKMQEIRERYKDDPAKAQSEMMALYR 365
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP +GCLP L IPV+ LY+ L V E F WI L+ P + +
Sbjct: 366 SEKVNPASGCLPILIQIPVFFALYKVLF-VTIEMRHAPFFGWIRDLSAP-------DPTN 417
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+ LF + PP A L +PV ++ +Q N P + ++
Sbjct: 418 LFNLFGLIPWDPP-------ALLHMPVWAIIMG--VTMFVQQKLNPAPADPIQAKIFTWM 468
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++ + S P+GL +YW NNLLS AQQ ++ +
Sbjct: 469 PIIFTFMLASFPAGLVIYWSWNNLLSVAQQWYIMR 503
>gi|309789712|ref|ZP_07684292.1| hypothetical protein OSCT_0243 [Oscillochloris trichoides DG-6]
gi|308228198|gb|EFO81846.1| hypothetical protein OSCT_0243 [Oscillochloris trichoides DG6]
Length = 348
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 119/231 (51%), Gaps = 16/231 (6%)
Query: 122 GFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKL 181
I++ T+ + PLT + SS M+ + P +K +Q +Y DQ+++Q ET +LY+
Sbjct: 35 ALGIVIFTICARLIILPLTLSSLRSSRQMQQIQPLIKELQRKYGKDQQKLQEETLKLYRD 94
Query: 182 AGINPLAGCLPTLATIPVWIGLYRALSN--VADEGL-LTEGFFWIPSLAGPTTIAARQNG 238
INP+ GCLP L +P++ G+Y+A+ + V ++ + L+ G ++ P +A
Sbjct: 95 YKINPVGGCLPVLLQLPIFFGVYQAVYHLMVVEQRVNLSAGA--KAAMENPDVVALFSEK 152
Query: 239 SGISWLFPFVD-GHPPLG-WSDTFA---YLVLPVLLVVSQYISVKIIQSSQNNDPNMKSS 293
LF +D G G FA Y VLP+L ++ Q + ++ + + DP K+
Sbjct: 153 -----LFGIIDLGRTAFGPHGSGFAEPIYFVLPILSILLQVLQ-TVMATPRVQDPQQKAM 206
Query: 294 QALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMK 344
F+PL+ GY A + PSG LYW ++L+ QQ + +G + +K
Sbjct: 207 TQAMMFMPLVFGYIAFTFPSGAVLYWVVSSLVGVVQQYFTSGWGSLANYLK 257
>gi|379022448|ref|YP_005299109.1| membrane protein insertase [Rickettsia canadensis str. CA410]
gi|376323386|gb|AFB20627.1| membrane protein insertase [Rickettsia canadensis str. CA410]
Length = 560
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 23/220 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L K S M++L P++ I+ Y D+ R+ E LYK
Sbjct: 361 FGISILIVTVIIKLLMFTLANKSYCSMKKMKNLQPEIDRIKNLYGDDKARLNQEIMALYK 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+AGCLP L IPV+ +Y+ L V E + WI L+ P + +
Sbjct: 421 KEKVNPVAGCLPILVQIPVFFSIYKVLY-VTIEMRQAPFYGWIKDLSAP-------DPTT 472
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQALT 297
I LF F+ PP ++L++ P+L+ ++ + +Q + +P +
Sbjct: 473 IFNLFGFLPFSPP-------SFLMIGAWPILMAITMF-----LQQRMSPEPADPVQAQVM 520
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
F+PL+ S P GL +YW NN+LS QQ ++ KF
Sbjct: 521 KFMPLIFLVMFSSFPVGLLIYWSWNNILSIIQQYYINKFN 560
>gi|335423896|ref|ZP_08552914.1| 60 kDa inner membrane insertion protein [Salinisphaera shabanensis
E1L3A]
gi|334890647|gb|EGM28909.1| 60 kDa inner membrane insertion protein [Salinisphaera shabanensis
E1L3A]
Length = 582
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 105/216 (48%), Gaps = 37/216 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLT ++K + L++ Q + MR AP+++ ++E+Y D++++Q + LYK
Sbjct: 389 WGVAIILLTFLIKLVFYKLSETQYRAMARMRKFAPRMQQLKEQYGDDRQKLQAKMMELYK 448
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF-FWIPSLAGPTTIAARQNGS 239
G NPLAGC P L +PV+I LY L + L F WI L+ P
Sbjct: 449 KEGFNPLAGCWPMLVQMPVFISLYWVLRESVE--LRHAPFMLWIQDLSAPDP-------- 498
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
Y +LPV+ V+ ++ K+ ++ DP Q +
Sbjct: 499 ----------------------YYILPVVFGVTMFLQQKLT-ANVTMDP---MQQRIMQI 532
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+P+ + F P+GL LYW TNNLLS QQ ++ +
Sbjct: 533 MPVGLAVFFAFFPAGLVLYWCTNNLLSIGQQWYIYR 568
>gi|162147919|ref|YP_001602380.1| inner membrane protein oxaA [Gluconacetobacter diazotrophicus PAl
5]
gi|161786496|emb|CAP56078.1| putative inner membrane protein oxaA [Gluconacetobacter
diazotrophicus PAl 5]
Length = 572
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 117/247 (47%), Gaps = 28/247 (11%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + +T + VL L + +G A++ T++VKA FPL +Q S MR
Sbjct: 331 WFAFLTRPIFYVLDWLNTLLGN------FGLALMAFTLLVKALFFPLATRQFRSMAKMRQ 384
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+V+ ++ERY DQ + LYK G+NP AGCLP + IPV+ LY+ L +
Sbjct: 385 LQPKVQELRERYKSDQMALNQNMMALYKAEGVNPAAGCLPMVVQIPVFWSLYKDLY-ITI 443
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISW----LFPFVDGHPPLGWSDTFAYLVLPVL 268
E F WI L+ P I W L P++ LG V P+L
Sbjct: 444 EMRHAPFFGWIHDLSAPDLTNLFNLFGLIPWDPNVLSPYLQ----LG--------VWPIL 491
Query: 269 LVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTA 328
+ ++ K+ N P + Q + +P++ +F P+GL +Y+ NNLL+ A
Sbjct: 492 FGATMFLQQKL-----NPAPTDPAQQRMFQMMPVLFTFFMARQPAGLVIYYCWNNLLTVA 546
Query: 329 QQVWLQK 335
QQ+ +Q+
Sbjct: 547 QQMVIQR 553
>gi|88658314|ref|YP_507580.1| putative inner membrane protein translocase component YidC
[Ehrlichia chaffeensis str. Arkansas]
gi|88599771|gb|ABD45240.1| inner-membrane protein, 60 kDa [Ehrlichia chaffeensis str.
Arkansas]
Length = 579
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 112/223 (50%), Gaps = 22/223 (9%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+LLT+++K FPL+ K S + +R L P + I+E Y D +++ E + ++K
Sbjct: 365 FGLAILLLTIVIKLIMFPLSHKSYVSMLKLRHLQPDIVRIKELYKNDNDKMSKEISAIFK 424
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP++G +P L IPV+ LY+ L V E + WI L+ T +
Sbjct: 425 KNNVNPMSGFVPVLIQIPVFFALYKVLF-VTIEMRHAPFYLWIKDLSSFDT-------AN 476
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNM---KSSQALT 297
I +F + +PP+ +LPV+L ++ IIQ NN ++ K+
Sbjct: 477 ILTIFGLLKFNPPICIG------ILPVILGITM-----IIQQKLNNHSSLNQDKTQANFM 525
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
FLP + + S P+GL +YW +N ++ QQ+ ++ + K
Sbjct: 526 KFLPYIFIFIFSSFPAGLIIYWICSNSITIVQQLIIKHYVTKK 568
>gi|254444960|ref|ZP_05058436.1| 60Kd inner membrane protein [Verrucomicrobiae bacterium DG1235]
gi|198259268|gb|EDY83576.1| 60Kd inner membrane protein [Verrucomicrobiae bacterium DG1235]
Length = 605
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 113/219 (51%), Gaps = 25/219 (11%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLT+IV+ A P+T ++S M L +KA++E++ D ++ Q LYK
Sbjct: 384 WGVAIILLTLIVRGALLPITLLSMKSMKKMSKLQEPMKALKEKFPDDTQKQQQHMMELYK 443
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
L INP+AGCLP L IP++ L+ L + A+ L F WI L+ P TIA N
Sbjct: 444 LNKINPVAGCLPMLLQIPIFFALFYMLRSAAE--LRFADFLWISDLSKPDTIATIPN--- 498
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQA-LTNF 299
P LG FA +LP + V++ + + + P++ ++QA + F
Sbjct: 499 ----------FPILG---DFALNLLPFVWVITLAYQMWTMPT-----PSVDNAQAKMMKF 540
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGG 338
+P + F SGL LYW +N+ + QQ WL K GG
Sbjct: 541 MPFIFFPFTYMFSSGLVLYWTVSNVFTIGQQ-WLVKRGG 578
>gi|68171979|ref|ZP_00545283.1| 60 kDa inner membrane protein [Ehrlichia chaffeensis str. Sapulpa]
gi|67998597|gb|EAM85346.1| 60 kDa inner membrane protein [Ehrlichia chaffeensis str. Sapulpa]
Length = 585
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 112/223 (50%), Gaps = 22/223 (9%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+LLT+++K FPL+ K S + +R L P + I+E Y D +++ E + ++K
Sbjct: 371 FGLAILLLTIVIKLIMFPLSHKSYVSMLKLRHLQPDIVRIKELYKNDNDKMSKEISAIFK 430
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP++G +P L IPV+ LY+ L V E + WI L+ T +
Sbjct: 431 KNNVNPMSGFVPVLIQIPVFFALYKVLF-VTIEMRHAPFYLWIKDLSSFDT-------AN 482
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNM---KSSQALT 297
I +F + +PP+ +LPV+L ++ IIQ NN ++ K+
Sbjct: 483 ILTIFGLLKFNPPICIG------ILPVILGITM-----IIQQKLNNHSSLNQDKTQANFM 531
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
FLP + + S P+GL +YW +N ++ QQ+ ++ + K
Sbjct: 532 KFLPYIFIFIFSSFPAGLIIYWICSNSITIVQQLIIKHYVTKK 574
>gi|269838379|ref|YP_003320607.1| 60 kDa inner membrane insertion protein [Sphaerobacter thermophilus
DSM 20745]
gi|269787642|gb|ACZ39785.1| 60 kDa inner membrane insertion protein [Sphaerobacter thermophilus
DSM 20745]
Length = 278
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 142/311 (45%), Gaps = 48/311 (15%)
Query: 102 ETVLKVLKDGMSTLH-VPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAI 160
E + ++ G+ L V + G A+IL T+++K A P+T + S+ A+R++ P ++ +
Sbjct: 5 EQFVDLIAGGLQGLAAVTGSAGLAVILFTLLLKIALLPITVRTRRSTAALRAIQPALREL 64
Query: 161 QERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNV--ADEGLLTE 218
QE+Y D++R ET +LY+ GINP AGCLPT+ IP +IGL A+ + + +G TE
Sbjct: 65 QEKYPDDRQRRSAETLKLYQQHGINPAAGCLPTVIKIPFFIGLIAAIRELSRSGDGAWTE 124
Query: 219 GFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVK 278
F W+P LA + H +LP+ + Q ++
Sbjct: 125 SFLWLPDLATADPL------------------H------------ILPIAAGLFQLLTGM 154
Query: 279 IIQSSQNNDPNMKSSQA---LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+ + + QA L P ++ P+G LYW + L S +Q +
Sbjct: 155 MARPAGQRGAARGKGQARAGLALLSPAIVVAIGWHAPAGPVLYWAVSALFSIGEQWLMTG 214
Query: 336 FGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQE 395
+G +D + +I + R PG A AE T + P F+QI ++
Sbjct: 215 WGAVRDWLPFLPEIPEYRR-------PGYVDPATLA--AEAATRQ---PPWIFRQINQRA 262
Query: 396 ARRRQQREEEK 406
A+R QQ E E+
Sbjct: 263 AQRIQQLEAER 273
>gi|315498839|ref|YP_004087643.1| membrane protein insertase, yidc/oxa1 family [Asticcacaulis
excentricus CB 48]
gi|315416851|gb|ADU13492.1| membrane protein insertase, YidC/Oxa1 family [Asticcacaulis
excentricus CB 48]
Length = 658
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 121/230 (52%), Gaps = 21/230 (9%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+ LTV+VK FPL K ES M+ L PQV+ +++++ G+ +++Q+E LY+
Sbjct: 381 FGLAILGLTVLVKLIFFPLAHKSYESMTKMKMLQPQVEELKKKHEGNPQQMQIEMMGLYQ 440
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLA--GPTTIAARQNG 238
+NP++GCLP +PV+ LY+ L V E F WI L+ PTT+
Sbjct: 441 KEKVNPMSGCLPIFVQMPVFYALYKVLF-VTIEMRHAPFFGWIQDLSDKDPTTM------ 493
Query: 239 SGISWLFPFVDGHPPL--GWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKS--S 293
+ L P+ P+ G T ++ +LP+L S ++ SQ+ +P M
Sbjct: 494 FNLFGLLPYDPAALPVIGGLMATSLHIGILPLLYGASMWL-------SQSMNPPMPDPMQ 546
Query: 294 QALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPM 343
+ + F+P+M + SGL +YW NN+L+ AQQ L + G ++P+
Sbjct: 547 RKIFAFMPVMFTFIMAPFASGLLIYWIWNNVLTVAQQYMLMRQMGVENPI 596
>gi|423101134|ref|ZP_17088838.1| stage III sporulation protein J [Listeria innocua ATCC 33091]
gi|370792249|gb|EHN60126.1| stage III sporulation protein J [Listeria innocua ATCC 33091]
Length = 287
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 109/213 (51%), Gaps = 39/213 (18%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGD----QERIQLETA 176
Y II++T++++ PL KQ++S AM SL P++K +QE+Y+ ++++Q ET
Sbjct: 65 YAVGIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKIKELQEKYSSKDNETKQKLQQETM 124
Query: 177 RLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ 236
RLY+ +NP+ GCLP L +P+ +G Y+A+S A+ + T+ F W+
Sbjct: 125 RLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDTFLWMQL----------- 171
Query: 237 NGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
G+P Y +LP++ ++ ++S KI Q KS +
Sbjct: 172 -------------GNPD-------PYYILPIVAALTTFLSSKISMMGQTQQN--KSMAMI 209
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
+P+MI + +++PS L+LYW N+ + Q
Sbjct: 210 VYIMPVMILFMGITLPSALALYWIIGNIFTVFQ 242
>gi|424715685|ref|YP_007016400.1| Membrane protein insertase YidC 2 [Listeria monocytogenes serotype
4b str. LL195]
gi|424014869|emb|CCO65409.1| Membrane protein insertase YidC 2 [Listeria monocytogenes serotype
4b str. LL195]
Length = 293
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 39/214 (18%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGD----QERIQLET 175
+Y II++T++++ PL KQ++S AM +L P++K +QE+Y+ ++++Q ET
Sbjct: 70 SYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQET 129
Query: 176 ARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAAR 235
RLY+ +NP+ GCLP L +P+ +G Y+A+S A+ + T+ F W+ L P
Sbjct: 130 MRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDSFLWM-QLGNPD----- 181
Query: 236 QNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
Y +LPV+ ++ ++S KI Q KS
Sbjct: 182 -------------------------PYYILPVVAALTTFLSSKISMMGQTQQN--KSMAM 214
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
+ +P+MI + +++PS L+LYW N+ + Q
Sbjct: 215 IVYIMPVMILFMGITLPSALALYWIIGNIFTVFQ 248
>gi|88607700|ref|YP_505133.1| putative inner membrane protein translocase component YidC
[Anaplasma phagocytophilum HZ]
gi|88598763|gb|ABD44233.1| inner membrane protein, 60 kDa [Anaplasma phagocytophilum HZ]
Length = 568
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 111/221 (50%), Gaps = 18/221 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI++LTV +K FPL+ + S ++ L P+V I+E Y D RI E A L+K
Sbjct: 361 FGLAIVMLTVAIKLVAFPLSMRSYVSMFKLKRLQPEVLRIKELYKTDDLRISKEIASLFK 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
++PL+G LP L IP++ LY+ L V E F WI L+ Q+ +
Sbjct: 421 KHKVSPLSGFLPVLIQIPIFFALYKVLF-VTIEMRHAPLFGWIRDLSS-------QDTAN 472
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
LF + PP F VLPV+L ++ + K++Q Q P+ + FL
Sbjct: 473 FLNLFGLIPLEPP------FCIGVLPVVLGLTMVLQQKVMQKDQAT-PD---RYGVMKFL 522
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKD 341
P + + S PSGL LYW +N+++ QQ+ ++ F K+
Sbjct: 523 PYIFVFVFSSFPSGLVLYWICSNVITILQQIVIRYFVCRKE 563
>gi|395785734|ref|ZP_10465462.1| membrane protein insertase, YidC/Oxa1 family domain [Bartonella
tamiae Th239]
gi|423717371|ref|ZP_17691561.1| membrane protein insertase, YidC/Oxa1 family domain [Bartonella
tamiae Th307]
gi|395424192|gb|EJF90379.1| membrane protein insertase, YidC/Oxa1 family domain [Bartonella
tamiae Th239]
gi|395427586|gb|EJF93677.1| membrane protein insertase, YidC/Oxa1 family domain [Bartonella
tamiae Th307]
Length = 615
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 121/251 (48%), Gaps = 29/251 (11%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W S IT M ++ +L +G AI+L+TVI+KA FPL K +S M+
Sbjct: 371 WFSMITKPMFALIDLLYKLTGN------FGIAILLVTVILKAILFPLANKSYKSMARMKM 424
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
+ P + I+E+Y D+ + Q LY+ INPLAGC P L P++ LY+ L +
Sbjct: 425 VQPAMMEIKEKYGSDKAKQQKAIMELYRTEKINPLAGCWPLLVQFPIFFALYKVLY-ITI 483
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVL---PVLL 269
E F WI LA P + + + LF + P A+LV+ P+++
Sbjct: 484 EMRHAPFFGWIQDLAAP-------DPTSLFNLFGLLPYAVP-------AFLVIGAWPIIM 529
Query: 270 VVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
++ ++ +++ N P + + ++P++ + S P+GL +YW NN LS Q
Sbjct: 530 GITMFLQMRM-----NPTPPDPTQAMIFTWMPVIFTFMLASFPAGLVIYWAWNNTLSIVQ 584
Query: 330 QVWLQKFGGAK 340
Q + K GAK
Sbjct: 585 QGIIMKRQGAK 595
>gi|161544990|ref|YP_153758.2| inner membrane protein translocase component YidC [Anaplasma
marginale str. St. Maries]
Length = 572
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 111/217 (51%), Gaps = 20/217 (9%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI++LT+ +K FPL+ K S ++ L P++ I+E + D RI E + L++
Sbjct: 363 FGLAIVMLTIAIKLVVFPLSSKSYVSMFKLKKLQPEISRIRELHKTDDVRISKEISALFR 422
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G++P++G LP L IPV+ LY+ L V E F WI L+ T +
Sbjct: 423 KHGVSPMSGFLPILVQIPVFFALYKVLF-VTIEMRHAPLFAWIQDLSSHDT-------AN 474
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQ-NNDPNMKSSQALTNF 299
+ LF + PP+ VLP++L ++ + KI Q Q DP + F
Sbjct: 475 LLNLFGLLRFEPPI------CVGVLPIILGITMVLQQKINQQDQATQDP-----YGVMKF 523
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKF 336
LP + + S P+GL LYW +N+++ QQ+++++F
Sbjct: 524 LPYVFVFIFSSFPAGLVLYWICSNVITMLQQLFVRRF 560
>gi|339320332|ref|YP_004680027.1| putative inner membrane protein translocase component YidC
[Candidatus Midichloria mitochondrii IricVA]
gi|338226457|gb|AEI89341.1| putative inner membrane protein translocase component YidC
[Candidatus Midichloria mitochondrii IricVA]
Length = 552
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 112/219 (51%), Gaps = 25/219 (11%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI++LT+ +K FPL K + ++ L PQ+ I+ERY D Q LYK
Sbjct: 352 FGVAILILTIFIKILLFPLAYKGFVNMNRLKVLQPQLATIKERYGDDVVAFQKSVMELYK 411
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
+NP++GCLP L +PV+ LY+ LS V E F WI L+ PTTI N
Sbjct: 412 KEKVNPMSGCLPLLLQMPVFFALYKVLS-VTIEMRHAPFFGWIKDLSAPDPTTIF---NL 467
Query: 239 SGISWLFPFVDGHPPLGWS-DTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
G+ L WS +F + VLP+L+ ++ + +Q S N P + +
Sbjct: 468 FGL------------LPWSVPSFLMMGVLPMLMAITMH-----MQQSLNPAPADPTQAQV 510
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+LPL+ + S PSGL LYW +N+LS QQ+ +++
Sbjct: 511 MKYLPLIFLFVFASFPSGLVLYWTWSNILSIIQQIVIKR 549
>gi|16804891|ref|NP_466376.1| hypothetical protein lmo2854 [Listeria monocytogenes EGD-e]
gi|46909042|ref|YP_015431.1| SpoJ protein [Listeria monocytogenes serotype 4b str. F2365]
gi|47097239|ref|ZP_00234801.1| spoJ protein [Listeria monocytogenes str. 1/2a F6854]
gi|226225403|ref|YP_002759510.1| SpoIIIJ protein [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|254824783|ref|ZP_05229784.1| spoJ protein [Listeria monocytogenes FSL J1-194]
gi|254827421|ref|ZP_05232108.1| spoJ protein [Listeria monocytogenes FSL N3-165]
gi|254851844|ref|ZP_05241192.1| spoJ protein [Listeria monocytogenes FSL R2-503]
gi|254913108|ref|ZP_05263120.1| spoJ protein [Listeria monocytogenes J2818]
gi|254930872|ref|ZP_05264231.1| spoJ protein [Listeria monocytogenes HPB2262]
gi|254937489|ref|ZP_05269186.1| OxaA-like protein [Listeria monocytogenes F6900]
gi|255520073|ref|ZP_05387310.1| SpoIIIJ protein [Listeria monocytogenes FSL J1-175]
gi|284800259|ref|YP_003412124.1| hypothetical protein LM5578_0004 [Listeria monocytogenes 08-5578]
gi|284993444|ref|YP_003415212.1| hypothetical protein LM5923_0004 [Listeria monocytogenes 08-5923]
gi|300763388|ref|ZP_07073386.1| spoJ protein [Listeria monocytogenes FSL N1-017]
gi|386045158|ref|YP_005963963.1| membrane protein OxaA [Listeria monocytogenes 10403S]
gi|386048586|ref|YP_005966918.1| spoJ protein [Listeria monocytogenes J0161]
gi|386051837|ref|YP_005969828.1| stage III sporulation protein J [Listeria monocytogenes FSL R2-561]
gi|386055032|ref|YP_005972590.1| OxaA-like protein [Listeria monocytogenes Finland 1998]
gi|386733555|ref|YP_006207051.1| hypothetical protein MUO_14335 [Listeria monocytogenes 07PF0776]
gi|404282426|ref|YP_006683324.1| membrane protein OxaA 1 [Listeria monocytogenes SLCC2755]
gi|404285363|ref|YP_006686260.1| membrane protein OxaA 1 [Listeria monocytogenes SLCC2372]
gi|404288238|ref|YP_006694824.1| membrane protein OxaA 1 [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|404412102|ref|YP_006697690.1| membrane protein OxaA 1 [Listeria monocytogenes SLCC5850]
gi|404414929|ref|YP_006700516.1| membrane protein OxaA 1 [Listeria monocytogenes SLCC7179]
gi|405751200|ref|YP_006674666.1| membrane protein OxaA 1 [Listeria monocytogenes ATCC 19117]
gi|405754075|ref|YP_006677540.1| membrane protein OxaA 1 [Listeria monocytogenes SLCC2378]
gi|405759919|ref|YP_006689195.1| membrane protein OxaA 1 [Listeria monocytogenes SLCC2479]
gi|406705593|ref|YP_006755947.1| membrane protein OxaA 1 precursor [Listeria monocytogenes L312]
gi|417314048|ref|ZP_12100754.1| hypothetical protein LM1816_03412 [Listeria monocytogenes J1816]
gi|424824603|ref|ZP_18249616.1| Membrane protein oxaA 1 [Listeria monocytogenes str. Scott A]
gi|38503109|sp|Q8Y3I2.1|YIDC2_LISMO RecName: Full=Membrane protein insertase YidC 2; AltName:
Full=Foldase YidC 2; AltName: Full=Membrane integrase
YidC 2; AltName: Full=Membrane protein YidC 2; Flags:
Precursor
gi|67461022|sp|Q71VQ8.1|YIDC1_LISMF RecName: Full=Membrane protein insertase YidC 1; AltName:
Full=Foldase YidC 1; AltName: Full=Membrane integrase
YidC 1; AltName: Full=Membrane protein YidC 1; Flags:
Precursor
gi|16412354|emb|CAD01067.1| lmo2854 [Listeria monocytogenes EGD-e]
gi|46882315|gb|AAT05608.1| spoJ protein [Listeria monocytogenes serotype 4b str. F2365]
gi|47014394|gb|EAL05365.1| spoJ protein [Listeria monocytogenes str. 1/2a F6854]
gi|225877865|emb|CAS06580.1| Putative SpoIIIJ protein [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258599799|gb|EEW13124.1| spoJ protein [Listeria monocytogenes FSL N3-165]
gi|258605137|gb|EEW17745.1| spoJ protein [Listeria monocytogenes FSL R2-503]
gi|258610091|gb|EEW22699.1| OxaA-like protein [Listeria monocytogenes F6900]
gi|284055821|gb|ADB66762.1| hypothetical protein LM5578_0004 [Listeria monocytogenes 08-5578]
gi|284058911|gb|ADB69850.1| hypothetical protein LM5923_0004 [Listeria monocytogenes 08-5923]
gi|293582417|gb|EFF94449.1| spoJ protein [Listeria monocytogenes HPB2262]
gi|293591110|gb|EFF99444.1| spoJ protein [Listeria monocytogenes J2818]
gi|293594022|gb|EFG01783.1| spoJ protein [Listeria monocytogenes FSL J1-194]
gi|300515665|gb|EFK42714.1| spoJ protein [Listeria monocytogenes FSL N1-017]
gi|328468319|gb|EGF39325.1| hypothetical protein LM1816_03412 [Listeria monocytogenes J1816]
gi|332313283|gb|EGJ26378.1| Membrane protein oxaA 1 [Listeria monocytogenes str. Scott A]
gi|345535577|gb|AEO05018.1| spoJ protein [Listeria monocytogenes J0161]
gi|345538392|gb|AEO07832.1| membrane protein oxaA 1 [Listeria monocytogenes 10403S]
gi|346425683|gb|AEO27208.1| stage III sporulation protein J [Listeria monocytogenes FSL R2-561]
gi|346647683|gb|AEO40308.1| OxaA-like protein [Listeria monocytogenes Finland 1998]
gi|384392313|gb|AFH81383.1| hypothetical protein MUO_14335 [Listeria monocytogenes 07PF0776]
gi|404220400|emb|CBY71764.1| membrane protein OxaA 1 precursor [Listeria monocytogenes ATCC
19117]
gi|404223275|emb|CBY74638.1| membrane protein OxaA 1 precursor [Listeria monocytogenes SLCC2378]
gi|404229061|emb|CBY50466.1| membrane protein OxaA 1 precursor [Listeria monocytogenes SLCC2755]
gi|404231928|emb|CBY53332.1| membrane protein OxaA 1 precursor [Listeria monocytogenes SLCC5850]
gi|404234865|emb|CBY56268.1| membrane protein OxaA 1 precursor [Listeria monocytogenes SLCC2372]
gi|404237801|emb|CBY59203.1| membrane protein OxaA 1 precursor [Listeria monocytogenes SLCC2479]
gi|404240628|emb|CBY62029.1| membrane protein OxaA 1 precursor [Listeria monocytogenes SLCC7179]
gi|404247167|emb|CBY05392.1| membrane protein OxaA 1 precursor [Listeria monocytogenes serotype
7 str. SLCC2482]
gi|406362623|emb|CBY68896.1| membrane protein OxaA 1 precursor [Listeria monocytogenes L312]
gi|441472675|emb|CCQ22430.1| Membrane protein insertase YidC 2 [Listeria monocytogenes]
gi|441475826|emb|CCQ25580.1| Membrane protein insertase YidC 2 [Listeria monocytogenes N53-1]
Length = 287
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 110/214 (51%), Gaps = 39/214 (18%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGD----QERIQLET 175
+Y II++T++++ PL KQ++S AM +L P++K +QE+Y+ ++++Q ET
Sbjct: 64 SYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQET 123
Query: 176 ARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAAR 235
RLY+ +NP+ GCLP L +P+ +G Y+A+S A+ + T+ F W+
Sbjct: 124 MRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDSFLWMQL---------- 171
Query: 236 QNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G+P Y +LPV+ ++ ++S KI Q KS
Sbjct: 172 --------------GNPD-------PYYILPVVAALTTFLSSKISMMGQTQQN--KSMAM 208
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
+ +P+MI + +++PS L+LYW N+ + Q
Sbjct: 209 IVYIMPVMILFMGITLPSALALYWIIGNIFTVFQ 242
>gi|157803235|ref|YP_001491784.1| putative inner membrane protein translocase component YidC
[Rickettsia canadensis str. McKiel]
gi|166977408|sp|A8EXB6.1|YIDC_RICCK RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|157784498|gb|ABV72999.1| putative inner membrane protein translocase component YidC
[Rickettsia canadensis str. McKiel]
Length = 560
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 23/220 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L K S M++L P++ I+ Y D+ R+ E LYK
Sbjct: 361 FGISILIVTVIIKLLMFTLANKSYCSMKKMKNLQPEIDRIKNLYGDDKARLNQEIMALYK 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+AGCLP L IPV+ +Y+ L V E + WI L+ P + +
Sbjct: 421 KEKVNPVAGCLPILVQIPVFFSIYKVLY-VTIEMRQAPFYGWIKDLSAP-------DPTT 472
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQALT 297
I LF F+ PP ++L++ P+L+ ++ + +Q + +P +
Sbjct: 473 IFNLFGFLPFSPP-------SFLMIGAWPILMAITMF-----LQQRMSPEPADPVQAQVM 520
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
F+PL+ S P GL +YW NN+LS QQ ++ KF
Sbjct: 521 KFMPLIFLVMFSSFPVGLLIYWSWNNILSIIQQYYINKFN 560
>gi|378821612|ref|ZP_09844492.1| membrane protein insertase, YidC/Oxa1 family domain protein
[Sutterella parvirubra YIT 11816]
gi|378599557|gb|EHY32565.1| membrane protein insertase, YidC/Oxa1 family domain protein
[Sutterella parvirubra YIT 11816]
Length = 562
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 101/216 (46%), Gaps = 38/216 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT IVKA +P++ S M+ + P++KAIQE+Y D++R+ LY+
Sbjct: 373 WGWAIVLLTCIVKAILYPISAAGYRSMARMKEVTPRMKAIQEKYKDDKQRLNQAMMELYQ 432
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRAL-SNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
INP+ GCLP IPV++ LY L +V G +E W+ LA P
Sbjct: 433 REKINPVGGCLPIFLQIPVFLALYWVLQGSVELRG--SEWILWVHDLAMPD--------- 481
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
+ VLP L+ + ++ + + N P +
Sbjct: 482 ---------------------PWFVLPALMAATMFLQIFL-----NPKPTDPVQARMMYI 515
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+P++ SGL LYW TNN+LS AQQ W+ K
Sbjct: 516 MPVVFSVMFFVFASGLVLYWLTNNVLSIAQQWWINK 551
>gi|421874920|ref|ZP_16306519.1| membrane insertase, YidC/Oxa1 family domain protein [Brevibacillus
laterosporus GI-9]
gi|372456117|emb|CCF16068.1| membrane insertase, YidC/Oxa1 family domain protein [Brevibacillus
laterosporus GI-9]
Length = 257
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 36/207 (17%)
Query: 129 TVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLA 188
T++++ T PL KQ++SS AM+ + P+++ I+++Y D +R+Q ET L++ INPLA
Sbjct: 72 TILIRTLTLPLNVKQIKSSKAMQVIQPELQKIRDKYKNDPQRVQQETMLLFQKNNINPLA 131
Query: 189 GCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFV 248
GCLP L +P+ I Y A+ ++ + + F W+
Sbjct: 132 GCLPLLVQMPILIAFYNAIIRTSE--IREQSFLWM------------------------- 164
Query: 249 DGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFA 308
LG D F +LPVL ++ ++ K++ S+ N+P M Q + +P+MI +
Sbjct: 165 ----QLGEKDPF--FILPVLAALTTFLQQKMMGSAMQNNPQM---QMMLYMMPIMILVIS 215
Query: 309 LSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+++PS L+LYW N+ Q +L K
Sbjct: 216 MTLPSALALYWVYGNIYMIIQTYFLYK 242
>gi|347759152|ref|YP_004866714.1| 60Kd inner membrane family protein [Micavibrio aeruginosavorus
ARL-13]
gi|347591670|gb|AEP10712.1| 60Kd inner membrane family protein [Micavibrio aeruginosavorus
ARL-13]
Length = 641
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 125/283 (44%), Gaps = 40/283 (14%)
Query: 116 HVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLET 175
HV +G AI++ T++++AA FPL S ++ LAPQ+ A++E Y D+E++Q E
Sbjct: 376 HVTGNFGVAILIFTLLLRAAVFPLANTSFRSFARLKQLAPQMTALREEYGHDKEKLQKEL 435
Query: 176 ARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAAR 235
LY +NP AGCLP L IP++ LY+ LS V E F WI L +
Sbjct: 436 VALYGREKVNPAAGCLPILIQIPIFFALYKVLS-VTIEMRHAPFFGWIQDL-------SM 487
Query: 236 QNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
++ + + LF G P D V P L++ I+Q S N P
Sbjct: 488 RDPTSLFNLF----GLLPYNVPDFLMIGVWPCLMLF-----FMILQKSMNPPPQDPIQAK 538
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDERL 355
+ F+P + Y SGL +YW +N LS QQ + + G + Q
Sbjct: 539 MLAFMPYFMTYIMAGFASGLVIYWTFSNALSILQQYIINRSMGIEVKFFQ---------- 588
Query: 356 DINKSVPGLSSTKKEARQAEKLTTEGP--RPGEKFKQIREQEA 396
E ++ EK+ EGP PG + + + ++A
Sbjct: 589 -----------RTPEEKKMEKMVAEGPVVHPGAELLEEQVEDA 620
>gi|456387105|gb|EMF52618.1| hypothetical protein SBD_5694 [Streptomyces bottropensis ATCC
25435]
Length = 426
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 115/229 (50%), Gaps = 24/229 (10%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L ++++ PL KQ++++ AM++L P++K IQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDKQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADE---GLLTEGFFWIPSLAGPTTIAAR 235
YK G NPL+ CLP LA P + LY L+++A+ G + + A +
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLNSIANNDTIGSINQNLL---------DSAQK 146
Query: 236 QNGSGISWLFPFVDGHPPLGWSDT------FAYLVLPVLLVVSQYISVKIIQSSQNND-- 287
+ G F D + D V+ VL+ SQ+ + + + ++N D
Sbjct: 147 AHIFGAPLAAKFTDSSADVAALDASLVTVRIVTAVMIVLMSGSQFYTQRQLM-TKNVDTT 205
Query: 288 ---PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P+M F ++ P G+ +YW T N+ + QQ+++
Sbjct: 206 VKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTMGQQMYV 254
>gi|209519687|ref|ZP_03268476.1| 60 kDa inner membrane insertion protein [Burkholderia sp. H160]
gi|209499904|gb|EDZ99970.1| 60 kDa inner membrane insertion protein [Burkholderia sp. H160]
Length = 552
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 38/220 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++I+LLT+++KA FPL+ +S M+++ P+++A++ER+ GD +++ LYK
Sbjct: 364 WGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKGDPQKMNAALMELYK 423
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRAL-SNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+NP GCLP + IPV+I LY L S+V G WI L+ +Q+
Sbjct: 424 TEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRG--APWILWIQDLS-------QQD-- 472
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
Y +LP+L+ VS ++ Q+ N P + F
Sbjct: 473 ---------------------PYFILPILMAVSMFL-----QTRLNPTPPDPVQAKMMMF 506
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGA 339
+P+ P+GL LY+ NN+LS AQQ ++ + G+
Sbjct: 507 MPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMGS 546
>gi|209542536|ref|YP_002274765.1| 60 kDa inner membrane insertion protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530213|gb|ACI50150.1| 60 kDa inner membrane insertion protein [Gluconacetobacter
diazotrophicus PAl 5]
Length = 589
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 117/247 (47%), Gaps = 28/247 (11%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + +T + VL L + +G A++ T++VKA FPL +Q S MR
Sbjct: 348 WFAFLTRPIFYVLDWLNTLLGN------FGLALMAFTLLVKALFFPLATRQFRSMAKMRQ 401
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+V+ ++ERY DQ + LYK G+NP AGCLP + IPV+ LY+ L +
Sbjct: 402 LQPKVQELRERYKSDQMALNQNMMALYKAEGVNPAAGCLPMVVQIPVFWSLYKDLY-ITI 460
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISW----LFPFVDGHPPLGWSDTFAYLVLPVL 268
E F WI L+ P I W L P++ LG V P+L
Sbjct: 461 EMRHAPFFGWIHDLSAPDLTNLFNLFGLIPWDPNVLSPYLQ----LG--------VWPIL 508
Query: 269 LVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTA 328
+ ++ K+ N P + Q + +P++ +F P+GL +Y+ NNLL+ A
Sbjct: 509 FGATMFLQQKL-----NPAPTDPAQQRMFQMMPVLFTFFMARQPAGLVIYYCWNNLLTVA 563
Query: 329 QQVWLQK 335
QQ+ +Q+
Sbjct: 564 QQMVIQR 570
>gi|423327388|ref|ZP_17305196.1| YidC/Oxa1 family membrane protein insertase [Myroides odoratimimus
CCUG 3837]
gi|404606863|gb|EKB06398.1| YidC/Oxa1 family membrane protein insertase [Myroides odoratimimus
CCUG 3837]
Length = 635
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 117/242 (48%), Gaps = 29/242 (11%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG AII LTV+V+ PLT K S M+++ P+V + E+Y D + Q ET LY
Sbjct: 380 YGIAIIALTVLVRLLISPLTYKSYVSQAKMKAIRPEVNELNEKYKNDPMKKQQETMNLYS 439
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
AG+NP+AGC+P L IP++ L++ + D L + F W L+ I
Sbjct: 440 KAGVNPMAGCIPALLQIPIFYSLFQFFPSAFD--LRQKSFLWADDLSSYDQILE------ 491
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQS-------SQNNDPNM-KS 292
+ + PF H L P+L V+ +I +K+ +Q P+M K
Sbjct: 492 LPFRIPFYGNHVSL----------FPILASVAIFIYMKMTTGDQQMAAPAQEGMPDMSKI 541
Query: 293 SQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKD 352
+ + PLM+ +F + SGLSLY+F +NL++ ++ +D +K II+D
Sbjct: 542 MKVMIYISPLMMLFFFNNYASGLSLYYFISNLITIGIMYVIKNHIVKEDKIKA---IIED 598
Query: 353 ER 354
+
Sbjct: 599 NK 600
>gi|339006722|ref|ZP_08639297.1| membrane protein OxaA [Brevibacillus laterosporus LMG 15441]
gi|338775931|gb|EGP35459.1| membrane protein OxaA [Brevibacillus laterosporus LMG 15441]
Length = 255
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 36/207 (17%)
Query: 129 TVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLA 188
T++++ T PL KQ++SS AM+ + P+++ I+++Y D +R+Q ET L++ INPLA
Sbjct: 70 TILIRTLTLPLNVKQIKSSKAMQVIQPELQKIRDKYKNDPQRVQQETMLLFQKNNINPLA 129
Query: 189 GCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFV 248
GCLP L +P+ I Y A+ ++ + + F W+
Sbjct: 130 GCLPLLVQMPILIAFYNAIIRTSE--IREQSFLWM------------------------- 162
Query: 249 DGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFA 308
LG D F +LPVL ++ ++ K++ S+ N+P M Q + +P+MI +
Sbjct: 163 ----QLGEKDPF--FILPVLAALTTFLQQKMMGSAMQNNPQM---QMMLYMMPIMILVIS 213
Query: 309 LSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+++PS L+LYW N+ Q +L K
Sbjct: 214 MTLPSALALYWVYGNIYMIIQTYFLYK 240
>gi|303256374|ref|ZP_07342388.1| inner membrane protein OxaA [Burkholderiales bacterium 1_1_47]
gi|331001500|ref|ZP_08325118.1| membrane protein insertase, YidC/Oxa1 family domain protein
[Parasutterella excrementihominis YIT 11859]
gi|302859865|gb|EFL82942.1| inner membrane protein OxaA [Burkholderiales bacterium 1_1_47]
gi|329568229|gb|EGG50046.1| membrane protein insertase, YidC/Oxa1 family domain protein
[Parasutterella excrementihominis YIT 11859]
Length = 565
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 36/210 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT IVKA +PL+ S M+ L P++KA++E+Y D++R+ + +YK
Sbjct: 375 WGWAIVLLTCIVKAILYPLSLAGYRSMAKMKDLGPRMKALKEKYGDDKQRLNMAMMEMYK 434
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INP+ GCLP +PV++ LY L + E FW+ LA P
Sbjct: 435 TEKINPVGGCLPIALQLPVFLALYWVLL-ASVELRDAPWIFWVTDLAAPD---------- 483
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+ +LP+L++++ I K+ N P + +
Sbjct: 484 --------------------PWFILPILMIITMVIQFKL-----NPTPPDPVQAKMMAIM 518
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
P + G + SGL LYW NN+LS QQ
Sbjct: 519 PFVFGIMFIFFASGLVLYWLVNNILSIIQQ 548
>gi|427400242|ref|ZP_18891480.1| membrane protein insertase, YidC/Oxa1 family domain [Massilia
timonae CCUG 45783]
gi|425720982|gb|EKU83897.1| membrane protein insertase, YidC/Oxa1 family domain [Massilia
timonae CCUG 45783]
Length = 560
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 130/293 (44%), Gaps = 53/293 (18%)
Query: 63 LGVAERLLFTLADAAVSSSDAVTTTKQNSDWLSGITNVMETV-----LKVLKDG----MS 113
+G + L A VS+ + + Q+ L IT +E V L V+ M+
Sbjct: 306 IGTVQSLGNVAPGATVSTDTRLYSGPQDEQILETITPGLELVKDYGMLTVIAKPIFWVMT 365
Query: 114 TLHVPYA-YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQ 172
LH +G+ I+ LT+++K A FPL+ S MR + P+++AI+ERY D ++Q
Sbjct: 366 QLHSMLGNWGWTIVALTILIKLAFFPLSAAGYRSMAKMRVVTPKMQAIRERYKSDPAKMQ 425
Query: 173 LETARLYKLAGINPLAGCLPTLATIPVWIGLYRAL-SNVADEGLLTEGFFWIPSLAGPTT 231
T LYK INPL GCLP L +PV+ LY L ++V G WI L P
Sbjct: 426 QATMELYKTEKINPLGGCLPILVQMPVFFALYWVLQASVEMRG--APWVLWIQDLTQPD- 482
Query: 232 IAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMK 291
Y +LPV+ VS YI+ K+ N P
Sbjct: 483 -----------------------------PYFILPVIYAVSMYITTKL-----NPQPTDP 508
Query: 292 SSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL--QKF--GGAK 340
+ F+P+ PSGL LYW NN+LS AQQ W+ +KF G AK
Sbjct: 509 VQAKMMLFMPIAFSVVFFFFPSGLVLYWVVNNILSIAQQ-WVITRKFESGAAK 560
>gi|437999699|ref|YP_007183432.1| preprotein translocase subunit YidC [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|451813325|ref|YP_007449778.1| preprotein translocase subunit YidC [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
gi|429338933|gb|AFZ83355.1| preprotein translocase subunit YidC [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|451779294|gb|AGF50174.1| preprotein translocase subunit YidC [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
Length = 540
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 100/211 (47%), Gaps = 38/211 (18%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+ I+LLTV VK FPL K S ++ ++P++++I+E+ D +R LY+
Sbjct: 357 WGWTIVLLTVFVKMIFFPLASKSYRSMARLKKISPRIQSIKEQCGDDTKRFNSSIIELYR 416
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRAL-SNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
INPL GCLP + IPV+I LY L S+V G FWI L+
Sbjct: 417 KEKINPLGGCLPMIIQIPVFISLYWVLLSSVEMRG--APWIFWIKDLSA----------- 463
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
T +++LP+L++++ + +K+ N P +
Sbjct: 464 -------------------TDPFMILPILMMITMVVQIKL-----NPSPPDPVQAKVMMI 499
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ G PSGL LYW NN+LS AQQ
Sbjct: 500 MPLVFGGMMFFFPSGLVLYWCINNILSIAQQ 530
>gi|345849347|ref|ZP_08802360.1| putative inner membrane protein translocase component YidC
[Streptomyces zinciresistens K42]
gi|345639253|gb|EGX60747.1| putative inner membrane protein translocase component YidC
[Streptomyces zinciresistens K42]
Length = 422
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 119/229 (51%), Gaps = 24/229 (10%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L ++++ PL KQ++++ AM++L P++K IQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDKQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADE---GLLTEGFFWIPSLAGPTTIAAR 235
YK G NPL+ CLP LA P + LY L+++A+ G++ + A +
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYSVLNSIANNKTIGVINQRLL---------ESAQQ 146
Query: 236 QNGSGISWLFPFVDGH---PPLGWSDTFAYLVLPVLLVV---SQYISVKIIQSSQNND-- 287
+ G F D L S T +V V++V+ SQ+ + + + ++N D
Sbjct: 147 AHIFGAPLAAKFTDSASDVAALNASLTTVRIVTAVMIVLMSASQFYTQRQLM-TKNVDTT 205
Query: 288 ---PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P+M F ++ P G+ +YW T N+ + QQ+++
Sbjct: 206 VKTPFMQQQKMLMYVFPIMFAVFGINFPVGVLVYWLTTNVWTMGQQMYV 254
>gi|383312052|ref|YP_005364853.1| membrane protein insertase [Candidatus Rickettsia amblyommii str.
GAT-30V]
gi|378930712|gb|AFC69221.1| membrane protein insertase [Candidatus Rickettsia amblyommii str.
GAT-30V]
Length = 560
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 118/222 (53%), Gaps = 27/222 (12%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++TVI+K F L + S M++L P++ I+ Y+ D+ R+ E LYK
Sbjct: 361 FGVSILIVTVIIKLLMFTLANQSYRSMKKMKNLQPEIDRIKNLYSDDKARLNQEIMALYK 420
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
+NP+AGCLP L IPV+ +Y+ L V E + WI L+ PTTI N
Sbjct: 421 KEKVNPVAGCLPILVQIPVFFSIYKVLY-VTIEMRQAPFYGWIKDLSAPDPTTIF---NL 476
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYLVL---PVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G L PF PP ++L++ P+L+ ++ ++ K+ S + DP M++
Sbjct: 477 FG---LLPF---SPP-------SFLMIGAWPILMAITMFLQQKM--SPEPADP-MQAQ-- 518
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFG 337
+ F+PL+ + S P GL +YW NN+LS QQ ++ KF
Sbjct: 519 VMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQQYYINKFN 560
>gi|83594668|ref|YP_428420.1| inner membrane protein translocase component YidC [Rhodospirillum
rubrum ATCC 11170]
gi|386351432|ref|YP_006049680.1| putative inner membrane protein translocase component YidC
[Rhodospirillum rubrum F11]
gi|83577582|gb|ABC24133.1| protein translocase subunit yidC [Rhodospirillum rubrum ATCC 11170]
gi|346719868|gb|AEO49883.1| putative inner membrane protein translocase component YidC
[Rhodospirillum rubrum F11]
Length = 595
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 111/220 (50%), Gaps = 19/220 (8%)
Query: 122 GFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKL 181
G AI+ TV++K FPL K S M+ L P++K +QER+ D+ R+ E LYK
Sbjct: 393 GLAILAFTVVLKLVFFPLANKSYRSMSKMKLLQPELKKLQERFKDDRARLNQEMMSLYKK 452
Query: 182 AGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGSG 240
+NPL+GCLP + IPV+ LY+ L V+ E + E F+ WI LA P + +
Sbjct: 453 EQVNPLSGCLPIVIQIPVFFALYKVLF-VSIE-MRHEPFYGWIRDLAAP-------DPTT 503
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+ LF + PP + P+++ V+ ++ K+ N P + + FL
Sbjct: 504 VFNLFGLIPWDPP----NMLMLGAWPLIMGVTMWMQQKL-----NPTPADPTQAKIMMFL 554
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
P+M + +GL +YW NNLLS QQ + K GAK
Sbjct: 555 PIMFTFMLAHFAAGLVIYWTWNNLLSITQQWVIMKRMGAK 594
>gi|392406969|ref|YP_006443577.1| membrane protein insertase [Anaerobaculum mobile DSM 13181]
gi|390620105|gb|AFM21252.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
protein [Anaerobaculum mobile DSM 13181]
Length = 274
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 120/227 (52%), Gaps = 16/227 (7%)
Query: 117 VPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETA 176
+ ++YG AIILLT++V+ +PL+ KQ+ S M+ + P++K +QE+Y D++++ E
Sbjct: 22 ISHSYGVAIILLTILVRVLLYPLSHKQLVSMKKMQQIQPRLKTLQEKYKDDKQKLNQEVM 81
Query: 177 RLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPT------ 230
+LY+ G+NP AGCLP L +P+ I L++ + N D G E FF SL
Sbjct: 82 KLYREYGVNPAAGCLPLLVQLPILILLFKVIMN-YDFG---EEFFLGISLKHSLLSLMSQ 137
Query: 231 TIAARQNGSGISWLFPFVDGHPP--LGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDP 288
+ +G+ + + +P L + L+L +L+ + KI + ++
Sbjct: 138 ALGVATAKAGVMTVISGIVSNPAGLLNFGLYGGTLILWLLIGFVTWFQQKITTTGAASE- 196
Query: 289 NMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+ F+PL + + LS+P G+ LYW ++L+ QQVW+Q+
Sbjct: 197 ---QMAFMGWFMPLFMMFICLSLPGGVLLYWGVSSLIGVVQQVWVQR 240
>gi|329938642|ref|ZP_08288038.1| Inner membrane protein translocase component YidC, long form
[Streptomyces griseoaurantiacus M045]
gi|329302133|gb|EGG46025.1| Inner membrane protein translocase component YidC, long form
[Streptomyces griseoaurantiacus M045]
Length = 443
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 119/229 (51%), Gaps = 24/229 (10%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L ++++ PL KQ++++ AM++L P++K IQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDKQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADE---GLLTEGFFWIPSLAGPTTIAAR 235
YK G NPL+ CLP LA P + LY L+ +A G++ + A +
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLNGIATGKTIGVINDDLL---------ASARK 146
Query: 236 QNGSGISWLFPFVDGH---PPLGWSDTFAYLVLPVLLVV---SQYISVKIIQSSQNND-- 287
+ G F+D LG + T +V V++V+ SQ+ + + + ++N D
Sbjct: 147 AHIFGAPLAAKFMDSSDKVEALGATLTDVRVVTAVMIVLMSFSQFYTQRQLM-TKNVDTT 205
Query: 288 ---PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P+M F ++ P G+ +YW T N+ + QQ+++
Sbjct: 206 VKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTMGQQMYV 254
>gi|114569009|ref|YP_755689.1| protein translocase subunit YidC [Maricaulis maris MCS10]
gi|122316769|sp|Q0ASI6.1|YIDC_MARMM RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|114339471|gb|ABI64751.1| protein translocase subunit yidC [Maricaulis maris MCS10]
Length = 592
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 131/274 (47%), Gaps = 30/274 (10%)
Query: 90 NSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMA 149
N WL +T +L +L+ + +G AI+ LT++VK FPL + S
Sbjct: 342 NWGWLWFLTRPFVWLLTMLEGALGQ------FGLAILALTLMVKIVMFPLANRAYASMAK 395
Query: 150 MRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSN 209
M+++ P++ I+ERY DQ++ Q LYK INPLAGCLP L IP++ LY+ L N
Sbjct: 396 MKAVQPKMAEIKERYGADQQKQQQALMELYKTEKINPLAGCLPILPQIPIFFALYQTLFN 455
Query: 210 VADEGLLTEGFFWIPSL--AGPTTIAARQNGSGISW-LFPFVDGHPPLGWSDTFAYLVLP 266
A E F WI L A PT I W LF + P T +L+
Sbjct: 456 -AIEMRHAPFFGWIRDLSAADPTNI----------WNLFGLIPYDP------TGIWLIGG 498
Query: 267 VLLVVSQYISVKIIQSSQN--NDPNMKSSQA-LTNFLPLMIGYFALSVPSGLSLYWFTNN 323
VL + + I + + ++Q N P QA + FLP++ + +GL +YW NN
Sbjct: 499 VLGIGAWPIIMGLTMAAQQALNPPPPDPMQARIFAFLPIVFTFILAPFAAGLVIYWAWNN 558
Query: 324 LLSTAQQ-VWLQKFGGAKDPMKQFSDIIKDERLD 356
LS QQ + +++ G K + ++K +R D
Sbjct: 559 FLSVLQQYIIMRRHGNETQVDKLVARLLKRDRGD 592
>gi|402825697|ref|ZP_10874961.1| membrane protein insertase [Sphingomonas sp. LH128]
gi|402260735|gb|EJU10834.1| membrane protein insertase [Sphingomonas sp. LH128]
Length = 587
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 112/213 (52%), Gaps = 17/213 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLT+IV+ FP+ ++Q S AMR++ P++KAIQERY D+++ Q E LYK
Sbjct: 366 FGVAIILLTLIVRGMMFPVAQRQFASMAAMRAIQPKMKAIQERYKDDKQKQQQEIMALYK 425
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPLAGCLP IPV+ LY+ L +A E WI L+ P +
Sbjct: 426 QEKVNPLAGCLPMFLQIPVFFALYKTLI-LAIEMRHQPFVLWIKDLSAPDPLHILN---- 480
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
LF + PP A +L +LL + Y+ ++ + DP + Q + +
Sbjct: 481 ---LFGLLPFDPP----SFLAIGLLALLLGATMYLQFQL--NPAQMDP---AQQQVFKLM 528
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P + + SGL +YW T+N+L+ AQQ +L
Sbjct: 529 PWFMMFVMAPFASGLLVYWITSNILTIAQQKFL 561
>gi|255003028|ref|ZP_05277992.1| putative inner membrane protein translocase component YidC
[Anaplasma marginale str. Puerto Rico]
Length = 647
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 111/217 (51%), Gaps = 20/217 (9%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI++LT+ +K FPL+ K S ++ L P++ I+E + D RI E + L++
Sbjct: 438 FGLAIVMLTIAIKLVVFPLSSKSYVSMFKLKKLQPEISRIRELHKTDDVRISKEISALFR 497
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G++P++G LP L IPV+ LY+ L V E F WI L+ T +
Sbjct: 498 KHGVSPMSGFLPILVQIPVFFALYKVLF-VTIEMRHAPLFAWIQDLSSHDT-------AN 549
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQ-NNDPNMKSSQALTNF 299
+ LF + PP+ VLP++L ++ + KI Q Q DP + F
Sbjct: 550 LLNLFGLLRFEPPI------CVGVLPIILGITMVLQQKINQQDQATQDP-----YGVMKF 598
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKF 336
LP + + S P+GL LYW +N+++ QQ+++++F
Sbjct: 599 LPYVFVFIFSSFPAGLVLYWICSNVITMLQQLFVRRF 635
>gi|254251055|ref|ZP_04944373.1| Preprotein translocase subunit YidC [Burkholderia dolosa AUO158]
gi|124893664|gb|EAY67544.1| Preprotein translocase subunit YidC [Burkholderia dolosa AUO158]
Length = 554
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 37/220 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 365 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 424
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 425 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 459
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D S Y +LPVL+ VS ++ K+ N P + F+
Sbjct: 460 APWILWIHD------LSQRDPYFILPVLMAVSMFVQTKL-----NPTPPDPVQAKMMMFM 508
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGA 339
P+ P+GL LY+ NN+LS AQQ ++ +K GG+
Sbjct: 509 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGS 548
>gi|363892147|ref|ZP_09319318.1| YidC/Oxa1 family membrane protein insertase [Eubacteriaceae
bacterium CM2]
gi|402837210|ref|ZP_10885735.1| 60Kd inner membrane protein [Eubacteriaceae bacterium OBRC8]
gi|361964500|gb|EHL17533.1| YidC/Oxa1 family membrane protein insertase [Eubacteriaceae
bacterium CM2]
gi|402275327|gb|EJU24480.1| 60Kd inner membrane protein [Eubacteriaceae bacterium OBRC8]
Length = 255
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 113/224 (50%), Gaps = 25/224 (11%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
Y +IIL T++ K PLT Q+ S AM+++ P+V I ++Y G+ ++ + ++LYK
Sbjct: 22 YALSIILFTIVTKFILLPLTFSQMRSMNAMKTIQPKVDEINKKYKGNPQKQSEKLSQLYK 81
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALS--------NVADEGLLTEGFFWIPSLAGPTTI 232
G+NP AGCLP L P+ I +YR + N L+ +GFFWI SL P I
Sbjct: 82 ENGVNPAAGCLPLLIQFPILIAMYRVVREPIKYVFLNETAYNLVDKGFFWIKSLEVPDVI 141
Query: 233 AARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKS 292
A + G + ++ P + S F Y V Q + SS +N
Sbjct: 142 AIQ--GINLPYILPVL--------SALFTY-------VQMQMSMSRSSSSSSSNATAEGM 184
Query: 293 SQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKF 336
++ +T +PLM+ + +++P+GL LYW T L+ QQ + K+
Sbjct: 185 NKTMTYMMPLMMLIWGINLPAGLILYWATGTLVQILQQYLIGKY 228
>gi|222475049|ref|YP_002563464.1| inner membrane protein translocase component YidC [Anaplasma
marginale str. Florida]
gi|255004151|ref|ZP_05278952.1| putative inner membrane protein translocase component YidC
[Anaplasma marginale str. Virginia]
gi|56387916|gb|AAV86503.1| 60 kD inner-membrane protein [Anaplasma marginale str. St. Maries]
gi|222419185|gb|ACM49208.1| 60kD inner-membrane protein (yidC) [Anaplasma marginale str.
Florida]
Length = 647
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 111/217 (51%), Gaps = 20/217 (9%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI++LT+ +K FPL+ K S ++ L P++ I+E + D RI E + L++
Sbjct: 438 FGLAIVMLTIAIKLVVFPLSSKSYVSMFKLKKLQPEISRIRELHKTDDVRISKEISALFR 497
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G++P++G LP L IPV+ LY+ L V E F WI L+ T +
Sbjct: 498 KHGVSPMSGFLPILVQIPVFFALYKVLF-VTIEMRHAPLFAWIQDLSSHDT-------AN 549
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQ-NNDPNMKSSQALTNF 299
+ LF + PP+ VLP++L ++ + KI Q Q DP + F
Sbjct: 550 LLNLFGLLRFEPPI------CVGVLPIILGITMVLQQKINQQDQATQDP-----YGVMKF 598
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKF 336
LP + + S P+GL LYW +N+++ QQ+++++F
Sbjct: 599 LPYVFVFIFSSFPAGLVLYWICSNVITMLQQLFVRRF 635
>gi|424865582|ref|ZP_18289446.1| inner membrane protein OxaA [SAR86 cluster bacterium SAR86B]
gi|400758591|gb|EJP72794.1| inner membrane protein OxaA [SAR86 cluster bacterium SAR86B]
Length = 516
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 108/224 (48%), Gaps = 36/224 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+ ++I++ T+++K FP+T K S MR +AP +K +QERY D++R+ E LYK
Sbjct: 325 WAYSIVVFTILLKLVLFPVTAKGFVSMGQMRKVAPMMKDLQERYKDDKQRLSSEMMNLYK 384
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPL GCLP LA +P +IG + AL + + L FFWI L+ P
Sbjct: 385 REKVNPLGGCLPVLAQVPFFIGFFFALREMVE--LRHASFFWISDLSIPD---------- 432
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
PL +LPVL + + K+ + DP Q + +
Sbjct: 433 ------------PL--------FILPVLFGLVMVFTQKLSPAPPTADP---MQQQIMKSM 469
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL-QKFGGAKDPM 343
P++ F L P+ L LY N+ +S AQQ +L +K G DP+
Sbjct: 470 PIVFSIFFLIFPAALCLYSVINSGVSLAQQRYLYKKHGVLGDPV 513
>gi|205371916|ref|ZP_03224736.1| OxaA-like protein precursor [Bacillus coahuilensis m4-4]
Length = 257
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 40/210 (19%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERY----AGDQERIQLET 175
+YG +II +T++++ PL KQ ++S AM+ L+P++++++E+Y A Q+++Q ET
Sbjct: 58 SYGLSIITVTILIRLVILPLVIKQTQNSKAMQKLSPEIQSLKEKYSSKDAQTQQKLQQET 117
Query: 176 ARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAAR 235
L++ G+NPLAGC P + +P+ IG Y A+ V + + + F W
Sbjct: 118 MALFQKHGVNPLAGCFPLIVQMPILIGFYHAI--VRTDAIKEDSFLWF------------ 163
Query: 236 QNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
LG +D Y +LP++ + ++ KI+ P M Q
Sbjct: 164 -----------------DLGVAD--PYFILPLVAGATTFLQQKIMMQGVPQQPQM---QM 201
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLL 325
+ +P+MI FA+S P+ LSLYW N+
Sbjct: 202 MLYLMPIMIVIFAISFPAALSLYWVVGNIF 231
>gi|422407931|ref|ZP_16484892.1| stage III sporulation protein J [Listeria monocytogenes FSL F2-208]
gi|313611878|gb|EFR86333.1| stage III sporulation protein J [Listeria monocytogenes FSL F2-208]
Length = 277
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 39/214 (18%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGD----QERIQLET 175
+Y II++T++++ PL KQ++S AM +L P++K +QE+Y+ ++++Q ET
Sbjct: 54 SYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQET 113
Query: 176 ARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAAR 235
RLY+ +NP+ GCLP L +P+ +G Y+A+S A+ + T+ F W+ L P
Sbjct: 114 MRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDSFLWM-QLGNPD----- 165
Query: 236 QNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
Y +LPV+ ++ ++S KI Q KS
Sbjct: 166 -------------------------PYYILPVVAALTTFLSSKISMMGQTQQN--KSMAM 198
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
+ +P+MI + +++PS L+LYW N+ + Q
Sbjct: 199 IVYIMPVMILFMGITLPSALALYWIIGNIFTVFQ 232
>gi|349700019|ref|ZP_08901648.1| translocase inner membrane component [Gluconacetobacter europaeus
LMG 18494]
Length = 586
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 121/245 (49%), Gaps = 23/245 (9%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W + +T + TVL L + +G A++ T++VKA FPL KQ S MR
Sbjct: 341 WFAFLTRPIFTVLDWLNTMLGN------FGLALMAFTLLVKALFFPLATKQFHSMGKMRQ 394
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P++KA++ERY DQ + + LYK +NP +GCLP L IPV+ LY+ L V
Sbjct: 395 LQPKIKALRERYKDDQMALNQQMIALYKQEKVNPASGCLPMLLQIPVFWCLYKDLY-VTI 453
Query: 213 EGLLTEGFFWIPSLAG--PTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLV 270
E F WI L+ PT + LF + +P + S + P+
Sbjct: 454 EMRHAPFFGWIHDLSSFDPTNLFT---------LFGLIPWNPSVI-SPMLQLGLWPIAFG 503
Query: 271 VSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
++ + ++ + + DP + Q + F+P++ +F PSGL +Y+ NNLL+ AQQ
Sbjct: 504 LTMFAQMR-LNPAPAADP---AQQKMFQFMPIIFTFFMARQPSGLVIYYCWNNLLTMAQQ 559
Query: 331 VWLQK 335
+Q+
Sbjct: 560 TLIQR 564
>gi|406878357|gb|EKD27280.1| OxaA [uncultured bacterium]
Length = 537
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 115/227 (50%), Gaps = 34/227 (14%)
Query: 115 LHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLE 174
++ + YG AIIL+T++ K T+PLTKK + S M+ L P V+ ++++Y D ++Q E
Sbjct: 341 FNLTHNYGIAIILMTLVFKIVTYPLTKKAMVSMKNMQKLQPYVEQLKKQYKDDPMQMQKE 400
Query: 175 TARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFW-IPSLAGPTTIA 233
T LYK +NPL GCLP L +P++I Y+A+SN + L FW I LA P I
Sbjct: 401 TMLLYKKHQVNPLQGCLPLLIQMPIFIAFYQAISNSVE---LQGAAFWIIKDLAAPDKI- 456
Query: 234 ARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSS 293
+ GI+ VLP+L+ + Q IS +Q++ DPN K
Sbjct: 457 LKIGDLGIN---------------------VLPLLMGIVQLISS--VQTT--TDPNQK-- 489
Query: 294 QALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
L F P+++ ++PS L LY+ + + Q W+ K K
Sbjct: 490 -MLMYFFPVLMIVIFYNMPSALVLYFVVSTFIGII-QTWMIKIPSKK 534
>gi|217965938|ref|YP_002351616.1| membrane protein OxaA 1 [Listeria monocytogenes HCC23]
gi|290892034|ref|ZP_06555031.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|386009635|ref|YP_005927913.1| membrane protein oxaA 1 [Listeria monocytogenes L99]
gi|386028262|ref|YP_005949038.1| hypothetical protein LMM7_2975 [Listeria monocytogenes M7]
gi|404409235|ref|YP_006691950.1| membrane protein OxaA 1 [Listeria monocytogenes SLCC2376]
gi|217335208|gb|ACK41002.1| membrane protein OxaA 1 [Listeria monocytogenes HCC23]
gi|290558628|gb|EFD92145.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|307572445|emb|CAR85624.1| membrane protein oxaA 1 precursor [Listeria monocytogenes L99]
gi|336024843|gb|AEH93980.1| hypothetical protein LMM7_2975 [Listeria monocytogenes M7]
gi|404243384|emb|CBY64784.1| membrane protein OxaA 1 precursor [Listeria monocytogenes SLCC2376]
Length = 287
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 39/214 (18%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGD----QERIQLET 175
+Y II++T++++ PL KQ++S AM +L P++K +QE+Y+ ++++Q ET
Sbjct: 64 SYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQET 123
Query: 176 ARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAAR 235
RLY+ +NP+ GCLP L +P+ +G Y+A+S A+ + T+ F W+ L P
Sbjct: 124 MRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDSFLWM-QLGNPD----- 175
Query: 236 QNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
Y +LPV+ ++ ++S KI Q KS
Sbjct: 176 -------------------------PYYILPVVAALTTFLSSKISMMGQTQQN--KSMAM 208
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
+ +P+MI + +++PS L+LYW N+ + Q
Sbjct: 209 IVYIMPVMILFMGITLPSALALYWIIGNIFTVFQ 242
>gi|167834935|ref|ZP_02461818.1| putative inner membrane protein translocase component YidC
[Burkholderia thailandensis MSMB43]
Length = 489
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 37/220 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 299 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 358
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 359 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 393
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D S Y +LPVL+ VS ++ K+ N P + F+
Sbjct: 394 APWILWIHD------LSQRDPYFILPVLMAVSMFVQTKL-----NPTPPDPVQAKMMMFM 442
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK-FGGA 339
P+ P+GL LY+ NN+LS AQQ ++ + GGA
Sbjct: 443 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLGGA 482
>gi|312144701|ref|YP_003996147.1| YidC/Oxa1 family membrane protein insertase [Halanaerobium
hydrogeniformans]
gi|311905352|gb|ADQ15793.1| membrane protein insertase, YidC/Oxa1 family [Halanaerobium
hydrogeniformans]
Length = 216
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 121/255 (47%), Gaps = 46/255 (18%)
Query: 92 DWL-SGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAM 150
DWL +G+T ++ + ++ + YG AI++ T+I+K +PLT KQ S M
Sbjct: 3 DWLINGMTYALDFIYGIVGN----------YGLAIVIFTLIIKIVLYPLTAKQTRSMREM 52
Query: 151 RSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNV 210
+ + P++K IQ +Y D+E+ Q E +LYK G+NP AGC P + + + I LYR + +
Sbjct: 53 QEIQPEMKKIQNKYEDDKEKQQEEMMKLYKDHGVNPAAGCFPMIVQMAILIPLYRTIFTL 112
Query: 211 ADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLV 270
D+ + E F WI ++ GS L D L+ V ++
Sbjct: 113 GDQ-MANEAFLWIGTIT---------QGS--------------LAEPDIAIVLLNAVAML 148
Query: 271 VSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+I+ +I + ++ M +PL I + +P+G+ +YWF + L + QQ
Sbjct: 149 AQTHITQQISGGGEKSNKMM-------YMMPLFIVFIGFRLPAGVLVYWFVSTLFTVGQQ 201
Query: 331 VWL----QKFGGAKD 341
L KF GA +
Sbjct: 202 YVLSKEPSKFKGAAN 216
>gi|193213717|ref|YP_001999670.1| 60 kDa inner membrane insertion protein [Chlorobaculum parvum NCIB
8327]
gi|254772767|sp|B3QLY4.1|YIDC_CHLP8 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|193087194|gb|ACF12470.1| 60 kDa inner membrane insertion protein [Chlorobaculum parvum NCIB
8327]
Length = 587
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 22/213 (10%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG II+ ++K T+PL+ +S M +L P +K IQE+Y D ++Q E R+YK
Sbjct: 364 YGLIIIIFAFLIKTVTWPLSLASTKSMKKMSALQPMMKEIQEKYKNDPAKLQSELGRIYK 423
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
AG+NPL GCLPT+ +P+ ++ + L GF W+ L+ P +I
Sbjct: 424 EAGVNPLGGCLPTVIQMPLLFAMFYVFRSSIQ--LRQHGFLWVKDLSVPDSIL------D 475
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+ P H L +P+L+ V+ + KI ++Q ND + +
Sbjct: 476 FGFKLPLYGDHIAL----------MPILMAVTVFFQQKITPTTQTND----QMKIMIWMF 521
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ F ++PSGL+LY+ N+ S AQQ ++
Sbjct: 522 PAMMLLFFNNMPSGLALYYLMFNVFSIAQQAYI 554
>gi|407796867|ref|ZP_11143818.1| OxaA-like protein precursor [Salimicrobium sp. MJ3]
gi|407018765|gb|EKE31486.1| OxaA-like protein precursor [Salimicrobium sp. MJ3]
Length = 255
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 132/282 (46%), Gaps = 54/282 (19%)
Query: 62 LLGVAERLLFTLADAAVSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAY 121
LL +A LLF A ++ + +T W + + L D +S +Y
Sbjct: 8 LLAMAGVLLFLSGCAQINQDVSADST---GFWNEFVVWPLSQTLLFFADFLSG-----SY 59
Query: 122 GFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERY----AGDQERIQLETAR 177
G AII +T+I++ PL KQ++SS +M+ + PQ++ ++++Y A Q+++Q ET
Sbjct: 60 GLAIITVTIIIRLVLLPLNVKQLKSSKSMQDIQPQLQELRQKYSSKDAQTQQKLQQETMN 119
Query: 178 LYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQN 237
L++ G+NPLAGCLP + +P+ IG Y A+ + + T F W+
Sbjct: 120 LFQQNGVNPLAGCLPIIVQMPILIGFYHAIMRTPE--IQTHNFMWL-------------- 163
Query: 238 GSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNN----DPNMKSS 293
LG D F L +L + ++ K++ + + +P M
Sbjct: 164 ---------------ELGSPDPF----LAILTAATTFLQQKLMMAGMSGAAGANPQM--- 201
Query: 294 QALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
Q + +PLMIG FA PS L+LYW N+ Q ++++K
Sbjct: 202 QMMLYIMPLMIGTFAFFFPSALALYWIVGNVFMILQTIFIRK 243
>gi|255025588|ref|ZP_05297574.1| SpoIIIJ protein [Listeria monocytogenes FSL J2-003]
Length = 283
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 110/214 (51%), Gaps = 39/214 (18%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGD----QERIQLET 175
+Y II++T++++ PL KQ++S AM +L P++K +QE+Y+ ++++Q ET
Sbjct: 64 SYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQET 123
Query: 176 ARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAAR 235
RLY+ +NP+ GCLP L +P+ +G Y+A+S A+ + T+ F W+
Sbjct: 124 MRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDSFLWMQL---------- 171
Query: 236 QNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
G+P Y +LPV+ ++ ++S KI Q KS
Sbjct: 172 --------------GNPD-------PYYILPVVAALTTFLSSKISMMGQTQQN--KSMAM 208
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
+ +P+MI + +++PS L+LYW N+ + Q
Sbjct: 209 IVYIMPVMILFMGITLPSALALYWIIGNIFTVFQ 242
>gi|189218938|ref|YP_001939579.1| preprotein translocase subunit YidC [Methylacidiphilum infernorum
V4]
gi|189185796|gb|ACD82981.1| Preprotein translocase subunit YidC [Methylacidiphilum infernorum
V4]
Length = 592
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 118/240 (49%), Gaps = 35/240 (14%)
Query: 97 ITNVMET-----VLKVLKDGMSTLH--VPYAYGFAIILLTVIVKAATFPLTKKQVESSMA 149
I VME V+K L M H +P YG IIL T+++K +PL K + A
Sbjct: 352 IDRVMEYGMWGWVVKPLVWCMVHFHSFIP-NYGLDIILFTLLLKGIFWPLQSKANRNMKA 410
Query: 150 MRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSN 209
M++L+P++K +Q RY +++Q E +LY+ G+NPL GCLP L IP++IG Y L
Sbjct: 411 MQALSPKLKELQARYKDQPDKMQAEMMKLYREYGVNPLGGCLPMLVQIPIFIGFYTMLQG 470
Query: 210 VADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLL 269
+ L + F WI L P TI +D +P LP+++
Sbjct: 471 SVE--LRNQSFLWIRDLTKPDTIFHIPTLG--------LDINP------------LPLIM 508
Query: 270 VVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
V +Q + ++ + +N P +K Q ++P+ F + S LSLYW NNL++ Q
Sbjct: 509 VGTQILLSRMTPQASDN-PQLKVFQ----WMPVFFLVFFYNFASALSLYWTVNNLVTIVQ 563
>gi|58617041|ref|YP_196240.1| inner membrane protein translocase component YidC [Ehrlichia
ruminantium str. Gardel]
gi|58416653|emb|CAI27766.1| 60 kD inner-membrane protein [Ehrlichia ruminantium str. Gardel]
Length = 575
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 115/225 (51%), Gaps = 14/225 (6%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+LLT+++K FPL+ K S ++ L P++ I+E Y D ++ E + L+K
Sbjct: 363 FGLAILLLTIVIKLIMFPLSYKSYVSMFKLKYLQPEILKIKELYKNDNTKMSKEVSLLFK 422
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
++P++G +P L IPV+ LY+ L V E + W+ L+ T +
Sbjct: 423 KNDVSPMSGFIPILIQIPVFFALYKVLF-VTIEMRHAPFYLWVKDLSNFDT-------AN 474
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+ LF ++ +PP+ +LPV+L ++ I K+ S+ ++ K + FL
Sbjct: 475 VLTLFGLLNFNPPICIG------ILPVILGITMIIQQKMNTSTHSSQDQDKIQASFIKFL 528
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQ 345
P + + S P+GL +YW +N ++ QQ+ ++ + G K +K
Sbjct: 529 PYVFIFIFSSFPTGLIIYWICSNSITIIQQLIIKAYIGRKFNLKH 573
>gi|187925954|ref|YP_001897596.1| inner membrane protein translocase component YidC [Burkholderia
phytofirmans PsJN]
gi|254772762|sp|B2T7U1.1|YIDC_BURPP RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|187717148|gb|ACD18372.1| 60 kDa inner membrane insertion protein [Burkholderia phytofirmans
PsJN]
Length = 552
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 38/219 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++I+LLT+++KA FPL+ +S M+++ P+++A++ER+ GD +++ LYK
Sbjct: 364 WGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKGDPQKMNSALMELYK 423
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRAL-SNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+NP GCLP + IPV+I LY L S+V G WI L+ +Q+
Sbjct: 424 TEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRG--APWILWIHDLS-------QQD-- 472
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
PF +LPVL+ VS ++ K+ N P + F
Sbjct: 473 ------PF---------------FILPVLMAVSMFLQTKL-----NPTPPDPVQAKMMMF 506
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGG 338
+P+ P+GL LY+ NN+LS AQQ ++ + G
Sbjct: 507 MPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545
>gi|410634849|ref|ZP_11345476.1| inner membrane protein oxaA [Glaciecola lipolytica E3]
gi|410145593|dbj|GAC12681.1| inner membrane protein oxaA [Glaciecola lipolytica E3]
Length = 553
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 35/209 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+++T+IVK A +PLTKKQ ES MR+LAP++ ++ER+ D++++ +YK
Sbjct: 364 WGLAIVVITIIVKGAMYPLTKKQYESMAKMRNLAPKMAQLKERHGDDRQKMSQAMMEMYK 423
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+ GC P L +P+++ LY L + E + FWI L
Sbjct: 424 KEKVNPMGGCFPLLLQMPIFLALYWVLLE-SVELRHADFIFWITDL-------------- 468
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
S Y VLPVL +S Y+ K +Q DP Q + ++
Sbjct: 469 ----------------SVKDPYFVLPVLTGLSMYLLQK-LQPMTIQDP---MQQKIMQWM 508
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
P+ + F P+GL LYW +N+++ Q
Sbjct: 509 PVAMSLFFFIFPAGLVLYWLISNVITLIQ 537
>gi|363894404|ref|ZP_09321490.1| hypothetical protein HMPREF9629_01816 [Eubacteriaceae bacterium
ACC19a]
gi|361962442|gb|EHL15570.1| hypothetical protein HMPREF9629_01816 [Eubacteriaceae bacterium
ACC19a]
Length = 252
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 117/226 (51%), Gaps = 32/226 (14%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
Y +IIL T++ K PLT Q+ S AM+++ P+V I ++Y G+ ++ + ++LYK
Sbjct: 22 YALSIILFTIVTKFILLPLTFSQMRSMNAMKTIQPKVDEINKKYKGNPQKQSEKLSQLYK 81
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALS--------NVADEGLLTEGFFWIPSLAGPTTI 232
G+NP AGCLP L P+ I +YR + N L+ +GFFWI SL P I
Sbjct: 82 ENGVNPAAGCLPLLIQFPILIAMYRVVREPIKYVFLNETAYNLVDKGFFWIKSLEVPDVI 141
Query: 233 AARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYI--SVKIIQSSQNNDPNM 290
A + GI+ P+ +LPVL + Y+ + + +SS +N
Sbjct: 142 AIQ----GIN--LPY----------------ILPVLSALFTYVQMQMSMSRSSSSNATAE 179
Query: 291 KSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKF 336
++ +T +PLM+ + +++P+GL LYW T L+ QQ + K+
Sbjct: 180 GMNKTMTYMMPLMMLVWGVNLPAGLILYWATGTLVQILQQYLIGKY 225
>gi|299132593|ref|ZP_07025788.1| membrane protein insertase [Afipia sp. 1NLS2]
gi|298592730|gb|EFI52930.1| membrane protein insertase [Afipia sp. 1NLS2]
Length = 611
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 112/220 (50%), Gaps = 11/220 (5%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+L+TVIVKA FPL K S M+++ PQ+ A++E+Y D+ + Q E +YK
Sbjct: 385 FGVAILLVTVIVKAIFFPLANKSYASMAKMKAVQPQLAALKEKYPDDKVKQQQEMMDIYK 444
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INP+AGCLP IPV+ LY+ L + E F WI L+ P N G
Sbjct: 445 KEKINPIAGCLPIAIQIPVFFALYKVLF-ITIEMRHAPFFGWIHDLSAPDPTHVF-NLFG 502
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
L P+ P+ A P+++ V+ + +K+ N P + + + +++
Sbjct: 503 ---LLPYDPSAVPII-GHYLAIGAWPLIMGVTMWFQMKL-----NPAPPDATQKMIFDWM 553
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
P++ + S P+GL +YW NN LS QQ + K G K
Sbjct: 554 PVIFTFMLASFPAGLVIYWAWNNTLSVIQQSAIMKKNGVK 593
>gi|13474029|ref|NP_105597.1| inner membrane protein translocase component YidC [Mesorhizobium
loti MAFF303099]
gi|38503148|sp|Q98D88.1|YIDC_RHILO RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|14024781|dbj|BAB51383.1| mlr4812 [Mesorhizobium loti MAFF303099]
Length = 603
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 117/248 (47%), Gaps = 23/248 (9%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W IT M ++ L + +G AI+ TVIVKA FPL K S M+
Sbjct: 360 WFHFITKPMFWLIDTLYKFLGN------FGLAILATTVIVKALFFPLANKSYASMANMKK 413
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
+ P++ I+E+YA D+ + Q LYK INPLAGC P IPV+ LY+ L +
Sbjct: 414 VQPKMLEIREKYADDKMKQQQAMMELYKTEKINPLAGCWPVALQIPVFFSLYKVLY-ITI 472
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E F WI LA P + + + LF G P+ V P+++ V+
Sbjct: 473 EMRHAPFFGWIQDLAAP-------DPTSLFNLF----GLIPVTLPHMLMIGVWPLIMGVT 521
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ +++ N P + A+ ++P++ + P+GL +YW NN+LS QQ
Sbjct: 522 MFLQMRM-----NPTPPDPTQAAIFTWMPVIFTFMMAGFPAGLVIYWAWNNMLSILQQGV 576
Query: 333 LQKFGGAK 340
+ K GAK
Sbjct: 577 IMKRQGAK 584
>gi|58578983|ref|YP_197195.1| inner membrane protein translocase component YidC [Ehrlichia
ruminantium str. Welgevonden]
gi|58417609|emb|CAI26813.1| 60 kD inner-membrane protein [Ehrlichia ruminantium str.
Welgevonden]
Length = 575
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 115/225 (51%), Gaps = 14/225 (6%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+LLT+++K FPL+ K S ++ L P++ I+E Y D ++ E + L+K
Sbjct: 363 FGLAILLLTIVIKLIMFPLSYKSYVSMFKLKYLQPEILKIKELYKNDNTKMSKEVSLLFK 422
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
++P++G +P L IPV+ LY+ L V E + W+ L+ T +
Sbjct: 423 KNDVSPMSGFIPILIQIPVFFALYKVLF-VTIEMRHAPFYLWVKDLSNFDT-------AN 474
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+ LF ++ +PP+ +LPV+L ++ I K+ S+ ++ K + FL
Sbjct: 475 VLTLFGLLNFNPPICIG------ILPVILGITMIIQQKMNTSTHSSQDQDKIQASFIKFL 528
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQ 345
P + + S P+GL +YW +N ++ QQ+ ++ + G K +K
Sbjct: 529 PYVFIFIFSSFPTGLIIYWICSNSITIIQQLIIKAYIGRKFNLKH 573
>gi|57239041|ref|YP_180177.1| inner membrane protein translocase component YidC [Ehrlichia
ruminantium str. Welgevonden]
gi|57161120|emb|CAH58031.1| putative integral membrane protein [Ehrlichia ruminantium str.
Welgevonden]
Length = 575
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 115/225 (51%), Gaps = 14/225 (6%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+LLT+++K FPL+ K S ++ L P++ I+E Y D ++ E + L+K
Sbjct: 363 FGLAILLLTIVIKLIMFPLSYKSYVSMFKLKYLQPEILKIKELYKNDNTKMSKEVSLLFK 422
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
++P++G +P L IPV+ LY+ L V E + W+ L+ T +
Sbjct: 423 KNDVSPMSGFIPILIQIPVFFALYKVLF-VTIEMRHAPFYLWVKDLSNFDT-------AN 474
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+ LF ++ +PP+ +LPV+L ++ I K+ S+ ++ K + FL
Sbjct: 475 VLTLFGLLNFNPPICIG------ILPVILGITMIIQQKMNTSTHSSQDQDKIQASFIKFL 528
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQ 345
P + + S P+GL +YW +N ++ QQ+ ++ + G K +K
Sbjct: 529 PYVFIFIFSSFPTGLIIYWICSNSITIIQQLIIKAYIGRKFNLKH 573
>gi|389878569|ref|YP_006372134.1| 60 kDa inner membrane insertion protein [Tistrella mobilis
KA081020-065]
gi|388529353|gb|AFK54550.1| 60 kDa inner membrane insertion protein [Tistrella mobilis
KA081020-065]
Length = 568
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 106/219 (48%), Gaps = 17/219 (7%)
Query: 122 GFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKL 181
G +I++LT+ KA FPL K + M+ L P++ ++ERY D+ R+ E LYK
Sbjct: 366 GISILILTLCTKALFFPLANKSYVAMSKMKKLQPELVKLRERYKDDKVRLNQEMMGLYKK 425
Query: 182 AGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGI 241
+NP AGCLP L IPV+ LY+ L V E F WI L+ P + I
Sbjct: 426 QKVNPAAGCLPILVQIPVFFALYKVLF-VTIEMRHKPFFGWIHDLSAPDPLY-------I 477
Query: 242 SWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLP 301
+ LF + PP A + PVL+ + ++ K+ N P + + FLP
Sbjct: 478 TNLFGLLPYTPP----HFLAIGIWPVLMAFTMFLQQKL-----NPAPADPTQAKIMMFLP 528
Query: 302 LMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
+M + P+GL +YW NNLLS QQ + + G K
Sbjct: 529 VMFLFLFAGFPAGLVIYWTWNNLLSIGQQWLIMRRMGVK 567
>gi|374710120|ref|ZP_09714554.1| OxaA-like protein precursor [Sporolactobacillus inulinus CASD]
Length = 259
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 116/232 (50%), Gaps = 42/232 (18%)
Query: 104 VLKVLKDGMSTLHVPY-AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQE 162
VL + K +S H+ + +YG AII+ T+IV+ PL KQV+SS AM+ L P++KA+QE
Sbjct: 41 VLPLSKFIISVAHLFWNSYGLAIIITTIIVRLVLLPLMAKQVKSSQAMQQLQPKIKALQE 100
Query: 163 RYAGD----QERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTE 218
+Y+ Q+++Q E +L++ +NPLAGCLP L +P+ Y+A+ ++ + T+
Sbjct: 101 KYSSKDQNTQKKLQEEQMKLFQEHSVNPLAGCLPILIQMPILFAFYQAIMRTSE--IKTQ 158
Query: 219 GFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVK 278
F W LG +D F +LP++ + ++ K
Sbjct: 159 SFLWF-----------------------------QLGSADPF--YILPIIAAATTFLQQK 187
Query: 279 I-IQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
I I N +P M S L F P+MI A PS L+LYW N+ Q
Sbjct: 188 IMIGRMGNTNPQM--SMMLYVF-PIMIAVPAFYFPSALALYWVVGNIFMIFQ 236
>gi|373111355|ref|ZP_09525612.1| YidC/Oxa1 family membrane protein insertase [Myroides odoratimimus
CCUG 10230]
gi|423130955|ref|ZP_17118630.1| YidC/Oxa1 family membrane protein insertase [Myroides odoratimimus
CCUG 12901]
gi|423134647|ref|ZP_17122294.1| YidC/Oxa1 family membrane protein insertase [Myroides odoratimimus
CIP 101113]
gi|371640544|gb|EHO06142.1| YidC/Oxa1 family membrane protein insertase [Myroides odoratimimus
CCUG 10230]
gi|371643507|gb|EHO09057.1| YidC/Oxa1 family membrane protein insertase [Myroides odoratimimus
CCUG 12901]
gi|371645899|gb|EHO11418.1| YidC/Oxa1 family membrane protein insertase [Myroides odoratimimus
CIP 101113]
Length = 635
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 117/242 (48%), Gaps = 29/242 (11%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG AII LTV+V+ PLT K S M+++ P+V + E+Y D + Q ET LY
Sbjct: 380 YGIAIIALTVLVRLLISPLTYKSYVSQAKMKAIRPEVNELNEKYKNDPMKKQQETMNLYS 439
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
AG+NP+AGC+P L IP++ L++ + D L + F W L+ I
Sbjct: 440 KAGVNPMAGCIPALLQIPIFYSLFQFFPSAFD--LRQKSFLWADDLSSYDQILE------ 491
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQS-------SQNNDPNM-KS 292
+ + PF H L P+L V+ ++ +K+ +Q P+M K
Sbjct: 492 LPFRIPFYGNHVSL----------FPILASVAIFVYMKMTTGDQQMAAPAQEGMPDMSKI 541
Query: 293 SQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKD 352
+ + PLM+ +F + SGLSLY+F +NL++ ++ +D +K II+D
Sbjct: 542 MKVMIYISPLMMLFFFNNYASGLSLYYFISNLITIGIMYVIKNHIVKEDKIKA---IIED 598
Query: 353 ER 354
+
Sbjct: 599 NK 600
>gi|91785811|ref|YP_561017.1| inner membrane protein translocase component YidC [Burkholderia
xenovorans LB400]
gi|123167872|sp|Q13SH4.1|YIDC_BURXL RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|91689765|gb|ABE32965.1| protein translocase subunit yidC [Burkholderia xenovorans LB400]
Length = 552
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 38/219 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++I+LLT+++KA FPL+ +S M+++ P+++A++ER+ GD +++ LYK
Sbjct: 364 WGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKGDPQKMNSALMELYK 423
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRAL-SNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+NP GCLP + IPV+I LY L S+V G WI L+ +Q+
Sbjct: 424 TEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRG--APWILWIHDLS-------QQD-- 472
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
+ +LPVL+ VS ++ K+ N P + F
Sbjct: 473 ---------------------PFFILPVLMAVSMFLQTKL-----NPTPPDPVQAKMMMF 506
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGG 338
+P+ P+GL LY+ NN+LS AQQ ++ + G
Sbjct: 507 MPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545
>gi|365858835|ref|ZP_09398741.1| membrane protein insertase, YidC/Oxa1 family domain protein
[Acetobacteraceae bacterium AT-5844]
gi|363713563|gb|EHL97166.1| membrane protein insertase, YidC/Oxa1 family domain protein
[Acetobacteraceae bacterium AT-5844]
Length = 588
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 107/216 (49%), Gaps = 19/216 (8%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI++ TV +KA FPL K +S M+ LAP++ I+ERY D + Q E LYK
Sbjct: 374 FGVAILVFTVALKALFFPLANKAYKSMARMKLLAPKMTEIRERYKDDPTKAQQEMMALYK 433
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP +GCLP L IPV+ LY+ L V E F WI L+ P + +
Sbjct: 434 TEKVNPASGCLPILIQIPVFFALYKVLF-VTIEMRHAPFFGWIRDLSAP-------DPTN 485
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII-QSSQNNDPNMKSSQALTNF 299
+ LF + PP A L +PV ++ + V + Q N P + +
Sbjct: 486 LFTLFGMIPWDPP-------ALLHMPVWALI---MGVTMFAQQKLNPQPPDPIQAKIFTW 535
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+P++ + S P+GL +YW NNLLS QQ ++ +
Sbjct: 536 MPVIFTFMLASFPAGLVIYWSWNNLLSIGQQAYISR 571
>gi|110632737|ref|YP_672945.1| putative inner membrane protein translocase component YidC
[Chelativorans sp. BNC1]
gi|110283721|gb|ABG61780.1| protein translocase subunit yidC [Chelativorans sp. BNC1]
Length = 609
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 113/223 (50%), Gaps = 17/223 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+ TV VK FPL K +S M+ + P + I+E+YA D+ + Q LYK
Sbjct: 382 FGVAILATTVFVKLVFFPLANKSYKSMANMKKVQPALLEIREKYADDKMKQQQAMMELYK 441
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAG--PTTIAARQNG 238
INPLAGC P L IPV+ LY+ L V E F WI L+ PTTI N
Sbjct: 442 KEKINPLAGCWPILIQIPVFFALYKVLY-VTIEMRHAPFFGWIQDLSAPDPTTIF---NL 497
Query: 239 SGISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALT 297
G L PF P+ F L V P+++ ++ ++ +++ N P + +
Sbjct: 498 FG---LLPFDPSQVPV--FGPFLMLGVWPIIMGITMFLQMRM-----NPTPPDPTQAMIF 547
Query: 298 NFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
N++P++ + + P+GL +YW NNLLS QQ + K GAK
Sbjct: 548 NWMPVIFTFMLATFPAGLVIYWAWNNLLSIIQQGVIMKRQGAK 590
>gi|385207757|ref|ZP_10034625.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
[Burkholderia sp. Ch1-1]
gi|385180095|gb|EIF29371.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
[Burkholderia sp. Ch1-1]
Length = 552
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 38/219 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++I+LLT+++KA FPL+ +S M+++ P+++A++ER+ GD +++ LYK
Sbjct: 364 WGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKGDPQKMNSALMELYK 423
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRAL-SNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+NP GCLP + IPV+I LY L S+V G WI L+ +Q+
Sbjct: 424 TEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRG--APWILWIHDLS-------QQD-- 472
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
+ +LPVL+ VS ++ K+ N P + F
Sbjct: 473 ---------------------PFFILPVLMAVSMFLQTKL-----NPTPPDPVQAKMMMF 506
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGG 338
+P+ P+GL LY+ NN+LS AQQ ++ + G
Sbjct: 507 MPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545
>gi|167568260|ref|ZP_02361134.1| putative inner membrane protein translocase component YidC
[Burkholderia oklahomensis C6786]
Length = 497
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 37/220 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 307 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 366
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 367 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 401
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D S Y +LPVL+ VS ++ K+ N P + F+
Sbjct: 402 APWVLWIHD------LSQRDPYFILPVLMAVSMFVQTKL-----NPTPPDPVQAKMMMFM 450
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK-FGGA 339
P+ P+GL LY+ NN+LS AQQ ++ + GGA
Sbjct: 451 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLGGA 490
>gi|433771828|ref|YP_007302295.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
protein [Mesorhizobium australicum WSM2073]
gi|433663843|gb|AGB42919.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
protein [Mesorhizobium australicum WSM2073]
Length = 606
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 116/248 (46%), Gaps = 23/248 (9%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W IT M ++ L + +G AI+ TVIVKA FPL K S M+
Sbjct: 363 WFHFITKPMFWLIDTLYKFLGN------FGLAILATTVIVKAIFFPLANKSYASMANMKK 416
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
+ P++ I+E+YA D+ + Q LYK INPLAGC P IPV+ LY+ L +
Sbjct: 417 VQPKMLEIREKYADDKMKQQQAMMELYKTEKINPLAGCWPVALQIPVFFSLYKVLY-ITI 475
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVS 272
E F WI LA P + + I LF V P+ V P+++ V+
Sbjct: 476 EMRHAPFFGWIQDLAAP-------DPTSIFNLFGLV----PVTLPHMLMIGVWPLIMGVT 524
Query: 273 QYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVW 332
++ +++ N P + A+ ++P++ + P+GL +YW NN LS QQ
Sbjct: 525 MFLQMRM-----NPTPPDPTQAAIFTWMPVIFTFMMAGFPAGLVIYWAWNNTLSILQQGV 579
Query: 333 LQKFGGAK 340
+ K GAK
Sbjct: 580 IMKRQGAK 587
>gi|167560996|ref|ZP_02353912.1| putative inner membrane protein translocase component YidC
[Burkholderia oklahomensis EO147]
Length = 483
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 37/220 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 293 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 352
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 353 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 387
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D S Y +LPVL+ VS ++ K+ N P + F+
Sbjct: 388 APWVLWIHD------LSQRDPYFILPVLMAVSMFVQTKL-----NPTPPDPVQAKMMMFM 436
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK-FGGA 339
P+ P+GL LY+ NN+LS AQQ ++ + GGA
Sbjct: 437 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLGGA 476
>gi|291438521|ref|ZP_06577911.1| membrane protein [Streptomyces ghanaensis ATCC 14672]
gi|291341416|gb|EFE68372.1| membrane protein [Streptomyces ghanaensis ATCC 14672]
Length = 421
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 117/229 (51%), Gaps = 24/229 (10%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L ++++ PL KQ++++ AM++L P++K IQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDRQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADE---GLLTEGFFWIPSLAGPTTIAAR 235
YK G NPL+ CLP LA P + LY L+++A G++ E A +
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLNSIASNDTIGVINERLL---------ESAQK 146
Query: 236 QNGSGISWLFPFVDGHPPLGWSDT------FAYLVLPVLLVVSQYISVKIIQSSQNND-- 287
+ G F D + ++ ++ VL+ +SQ+ + + + ++N D
Sbjct: 147 AHIFGAPLAAKFTDSSEKVAALNSSLTDVRVVTAIMIVLMSLSQFYTQRQLM-TKNVDTT 205
Query: 288 ---PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P++ F ++ P G+ +YW T N+ + QQ+++
Sbjct: 206 VKTPFMQQQKMLMYVFPIIFAVFGINFPVGVLVYWLTTNVWTMGQQMYI 254
>gi|443474059|ref|ZP_21064080.1| Inner membrane protein translocase component YidC, long form
[Pseudomonas pseudoalcaligenes KF707]
gi|442904994|gb|ELS29909.1| Inner membrane protein translocase component YidC, long form
[Pseudomonas pseudoalcaligenes KF707]
Length = 558
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 108/215 (50%), Gaps = 36/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++II+LT+++K A FPL+ S MR+++P+++A++E++ D++++ LYK
Sbjct: 369 WGWSIIVLTILIKGAFFPLSAASYRSMARMRAVSPKLQALKEQHGDDRQKMSQAMMELYK 428
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L +PV++ LY L ++ RQ
Sbjct: 429 KEKINPLGGCLPILVQMPVFLALYWVLLE---------------------SVEMRQA--- 464
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+F D L D F +LP+++ + +I Q N P + +
Sbjct: 465 -PWMFWITD----LSIKDPF--FILPIIMGATMFI-----QQQLNPTPPDPMQAKVLKLM 512
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++ +F L P+GL LYW NN+LS AQQ ++ +
Sbjct: 513 PIIFTFFFLWFPAGLVLYWVVNNVLSIAQQWYITR 547
>gi|33151313|ref|NP_872666.1| inner membrane protein translocase component YidC [Haemophilus
ducreyi 35000HP]
gi|38502923|sp|Q7VPM2.1|YIDC_HAEDU RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|33147533|gb|AAP95055.1| 60 kDa inner-membrane protein [Haemophilus ducreyi 35000HP]
Length = 536
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 146/331 (44%), Gaps = 56/331 (16%)
Query: 5 LSIHQNLILSPFPNRTDIQTPLFTRTHFGLKPF-LRGSICVAKFGLRPDPNSADGVKELL 63
+++ Q+ +S + D L++RTH G+ RG I K PN+ + L
Sbjct: 245 VALLQHYFVSAWVPNQDASNTLYSRTHNGVATIGYRGPITTVK------PNTKTTITSQL 298
Query: 64 GVAERLLFTLADAAVSSSDAVTTTKQNSDWLSGITNVMETVLKVLKDGMSTLHVPYAYGF 123
+ +A AA V + W I + +L + + +G
Sbjct: 299 WTGPKDQKEMAQAATHLELTV-----DYGWAWFIAKPLFWLLIFIHSIIGN------WGL 347
Query: 124 AIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAG 183
AI+ +T++VK+ +PLTK Q S MR L P+++ ++ERY D++++ E +LYK
Sbjct: 348 AIMGVTLVVKSLLYPLTKAQYTSMAKMRMLQPKLQELRERYGDDRQQMSQEMMKLYKQEK 407
Query: 184 INPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGSGIS 242
+NP+ GCLP + +P++I LY + L FF WI L+
Sbjct: 408 VNPMGGCLPLILQMPIFIALYWTFMEAVE--LRHAPFFGWIQDLSAQD------------ 453
Query: 243 WLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPL 302
Y + PVL+ +S ++ K+ ++ + +K + F+P+
Sbjct: 454 ------------------PYYIFPVLMGLSMFLLQKMSPTAVADPTQLK----VMTFMPV 491
Query: 303 MIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
+ F L PSGL LYW T+N ++ QQ WL
Sbjct: 492 IFTVFFLWFPSGLVLYWLTSNCITIVQQ-WL 521
>gi|408492149|ref|YP_006868518.1| inner membrane protein translocase component (long form) YidC
[Psychroflexus torquis ATCC 700755]
gi|408469424|gb|AFU69768.1| inner membrane protein translocase component (long form) YidC
[Psychroflexus torquis ATCC 700755]
Length = 636
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 110/217 (50%), Gaps = 31/217 (14%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
+YG AII++T++V+ P+T K S M+ L P++ I E++ + + Q ET +LY
Sbjct: 383 SYGLAIIVMTIVVRIVLSPITYKSYVSQAKMKVLKPEINEINEKFKDNAMKKQQETMKLY 442
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
G++PLAGC+P L IPV+ L++ + D L +GF W L+ I
Sbjct: 443 SKTGVSPLAGCIPALLQIPVFYALFQFFPSAFD--LRQKGFLWADDLSSYDVI------- 493
Query: 240 GISWLFPFVDGHPPLGWSDTFAY----LVLPVLLVVSQYISVKII------QSSQNNDPN 289
W D + PL +FAY + P+L ++ + ++ QSSQ PN
Sbjct: 494 -FEW-----DAYIPLV---SFAYGNHVSLFPILASIAIFFYTQMTAGQNMQQSSQPGMPN 544
Query: 290 MKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLS 326
MK + F P ++ F + SGLSLY+F +NL++
Sbjct: 545 MK---VIMYFAPFIMLIFFNNYASGLSLYYFISNLIT 578
>gi|167843727|ref|ZP_02469235.1| putative inner membrane protein translocase component YidC
[Burkholderia pseudomallei B7210]
Length = 499
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 37/220 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 309 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 368
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 369 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 403
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D S Y +LPVL+ VS ++ K+ N P + F+
Sbjct: 404 APWVLWIHD------LSQRDPYFILPVLMAVSMFVQTKL-----NPTPPDPVQAKMMMFM 452
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK-FGGA 339
P+ P+GL LY+ NN+LS AQQ ++ + GGA
Sbjct: 453 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLGGA 492
>gi|315273159|ref|ZP_07869206.1| stage III sporulation protein J [Listeria marthii FSL S4-120]
gi|313616210|gb|EFR89288.1| stage III sporulation protein J [Listeria marthii FSL S4-120]
Length = 287
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 39/214 (18%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGD----QERIQLET 175
+Y II++T++++ PL KQ++S AM +L P++K +QE+Y+ ++++Q ET
Sbjct: 64 SYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQET 123
Query: 176 ARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAAR 235
RLY+ +NP+ GCLP L +P+ +G Y+A+S A+ + T+ F W+ L P
Sbjct: 124 MRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDSFLWM-QLGNPD----- 175
Query: 236 QNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
Y +LPV+ ++ ++S KI Q KS
Sbjct: 176 -------------------------PYYILPVVAALTTFLSSKISMMGQTQQN--KSMAM 208
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
+ +P+MI + +++PS L+LYW N+ + Q
Sbjct: 209 IVYIMPVMILFMGITLPSALALYWIIGNVFTVFQ 242
>gi|401680198|ref|ZP_10812121.1| 60Kd inner membrane protein [Veillonella sp. ACP1]
gi|400218813|gb|EJO49685.1| 60Kd inner membrane protein [Veillonella sp. ACP1]
Length = 218
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 98/199 (49%), Gaps = 34/199 (17%)
Query: 138 PLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATI 197
PLT KQ++S AM+ L P++K +QE+Y D +R+Q E +YK G+NPLAGCLP L +
Sbjct: 47 PLTVKQIKSMKAMQELQPRMKELQEKYKNDPQRLQAEMGAMYKEMGVNPLAGCLPLLVQM 106
Query: 198 PVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWS 257
P I ++ AL E F W+PSL G S
Sbjct: 107 PFLIAIFYALQGYPYNPEF-EHFLWLPSL----------------------------GES 137
Query: 258 DTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTN-FLPLMIGYFALSVPSGLS 316
D Y +LPVL +S ++ + Q+ Q + F+PL IGY +L+ PSGL
Sbjct: 138 D--PYYILPVLSALSTWLMSR--QTGMGASGAAAQQQKIMQIFMPLFIGYISLNFPSGLV 193
Query: 317 LYWFTNNLLSTAQQVWLQK 335
+YW +N+ QQ ++ K
Sbjct: 194 IYWIVSNVFQLVQQHFIYK 212
>gi|383318450|ref|YP_005379292.1| preprotein translocase subunit YidC [Frateuria aurantia DSM 6220]
gi|379045554|gb|AFC87610.1| preprotein translocase subunit YidC [Frateuria aurantia DSM 6220]
Length = 559
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 100/217 (46%), Gaps = 43/217 (19%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILL +++KAA + LT Q S+ MR L P+V A++ERY D+ ++Q LYK
Sbjct: 367 WGLAIILLVLVIKAAIWKLTALQFYSAARMRKLQPRVDALKERYGDDKMKMQQAMMDLYK 426
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP+AGCLP L T PV+IGLYR LS ++ RQ
Sbjct: 427 KEKVNPMAGCLPVLITFPVFIGLYRVLSE---------------------SVELRQA--- 462
Query: 241 ISWLFPFVDGHPPLGWSDTFA----YLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQAL 296
PF GW + Y +LP L V+ + + DP + +
Sbjct: 463 -----PFY------GWIHDLSVQDPYFILPALYVLVMLATQWLTPPPAGMDP---AQARM 508
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
F+PL+ P+GL LYW N S QQ W+
Sbjct: 509 MKFMPLLFAVVMAFFPAGLVLYWIINGGTSLIQQ-WM 544
>gi|408679377|ref|YP_006879204.1| Inner membrane protein translocase component YidC, long form
[Streptomyces venezuelae ATCC 10712]
gi|328883706|emb|CCA56945.1| Inner membrane protein translocase component YidC, long form
[Streptomyces venezuelae ATCC 10712]
Length = 441
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 115/230 (50%), Gaps = 26/230 (11%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L V+++ PL KQ++S+ M++L P++KAIQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQALQPKMKAIQERYKSDKQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADE---GLLTEGFFWIPSLAGPTTIAAR 235
YK G NPL+ CLP LA P + LY LS++A G++ + +AR
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLSSIASGKTIGVIDDSLL----------ASAR 145
Query: 236 Q-NGSGISWLFPFVDGHPPLGWSDT------FAYLVLPVLLVVSQYISVKIIQSSQNND- 287
Q + G F D + D ++ VL+ SQ+ + + + +N D
Sbjct: 146 QAHIFGAPLASKFTDSAAEVAALDASLTSVRIVTAIMIVLMSASQFFTQRQLM-MKNVDL 204
Query: 288 ----PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P++ ++ P G+ +YW T N+ + QQ+++
Sbjct: 205 SVKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTNVWTMGQQMYV 254
>gi|167736503|ref|ZP_02409277.1| putative inner membrane protein translocase component YidC
[Burkholderia pseudomallei 14]
Length = 496
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 37/220 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 306 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 365
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 366 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 400
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D S Y +LPVL+ VS ++ K+ N P + F+
Sbjct: 401 APWVLWIHD------LSQRDPYFILPVLMAVSMFVQTKL-----NPTPPDPVQAKMMMFM 449
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK-FGGA 339
P+ P+GL LY+ NN+LS AQQ ++ + GGA
Sbjct: 450 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLGGA 489
>gi|220925223|ref|YP_002500525.1| YidC translocase/secretase [Methylobacterium nodulans ORS 2060]
gi|254773002|sp|B8IMM9.1|YIDC_METNO RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|219949830|gb|ACL60222.1| YidC translocase/secretase [Methylobacterium nodulans ORS 2060]
Length = 605
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 111/220 (50%), Gaps = 17/220 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I+++T+I+K P+ + S M+++ P++ AI+ERYA D+ + Q LY+
Sbjct: 381 FGVSILVVTLILKLFFLPIANRSYVSMAKMKAVQPEMTAIRERYADDKVKQQQAMMELYR 440
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INP+AGC P + IPV+ LY+ L V E F WI LA P +
Sbjct: 441 KEKINPVAGCWPVVIQIPVFFALYKVLF-VTIEMRHAPFFGWIRDLAAPDPTSVLN---- 495
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
LF G P D V P+++ ++ ++ +K+ P+ +Q T F+
Sbjct: 496 ---LF----GLLPFAAPDLVHLGVWPIVMGITMFLQMKM----NPAPPDPVQAQVFT-FM 543
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
P++ + S P+GL +YW NNLLS QQ W+ + G K
Sbjct: 544 PIIFTFMLGSFPAGLVIYWAWNNLLSILQQYWIMRRNGVK 583
>gi|420473239|ref|ZP_14971917.1| inner membrane protein oxaA [Helicobacter pylori Hp H-19]
gi|393090367|gb|EJB91000.1| inner membrane protein oxaA [Helicobacter pylori Hp H-19]
Length = 550
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 351 WGWAIILLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 410
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 411 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 456
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 457 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 495
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 496 PLLFTLFLITFPAGLVLYWTTNNILSVLQQLIINK 530
>gi|424901672|ref|ZP_18325188.1| inner membrane protein translocase component YidC [Burkholderia
thailandensis MSMB43]
gi|390932047|gb|EIP89447.1| inner membrane protein translocase component YidC [Burkholderia
thailandensis MSMB43]
Length = 557
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 37/220 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 367 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 426
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 427 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 461
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D L D Y +LPVL+ VS ++ K+ N P + F+
Sbjct: 462 APWILWIHD----LSQRD--PYFILPVLMAVSMFVQTKL-----NPTPPDPVQAKMMMFM 510
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK-FGGA 339
P+ P+GL LY+ NN+LS AQQ ++ + GGA
Sbjct: 511 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLGGA 550
>gi|53724898|ref|YP_104854.1| inner membrane protein translocase component YidC [Burkholderia
mallei ATCC 23344]
gi|67639597|ref|ZP_00438442.1| inner membrane protein, 60 kDa [Burkholderia mallei GB8 horse 4]
gi|121600195|ref|YP_994138.1| putative inner membrane protein translocase component YidC
[Burkholderia mallei SAVP1]
gi|124386283|ref|YP_001028205.1| inner membrane protein translocase component YidC [Burkholderia
mallei NCTC 10229]
gi|126451415|ref|YP_001083056.1| inner membrane protein translocase component YidC [Burkholderia
mallei NCTC 10247]
gi|167001176|ref|ZP_02266975.1| membrane protein OxaA [Burkholderia mallei PRL-20]
gi|254174811|ref|ZP_04881472.1| inner membrane protein, 60 kDa [Burkholderia mallei ATCC 10399]
gi|254201964|ref|ZP_04908328.1| membrane protein OxaA [Burkholderia mallei FMH]
gi|254207296|ref|ZP_04913647.1| membrane protein OxaA [Burkholderia mallei JHU]
gi|254359605|ref|ZP_04975876.1| membrane protein OxaA [Burkholderia mallei 2002721280]
gi|81684886|sp|Q62EM4.1|YIDC_BURMA RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|166975852|sp|A3MS20.1|YIDC_BURM7 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|166975853|sp|A2S8D6.1|YIDC_BURM9 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|166975854|sp|A1V7D5.1|YIDC_BURMS RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|52428321|gb|AAU48914.1| inner membrane protein, 60 kDa [Burkholderia mallei ATCC 23344]
gi|121229005|gb|ABM51523.1| inner membrane protein, 60 kDa [Burkholderia mallei SAVP1]
gi|124294303|gb|ABN03572.1| inner membrane protein, 60 kDa [Burkholderia mallei NCTC 10229]
gi|126244285|gb|ABO07378.1| inner membrane protein, 60 kDa [Burkholderia mallei NCTC 10247]
gi|147747858|gb|EDK54934.1| membrane protein OxaA [Burkholderia mallei FMH]
gi|147752838|gb|EDK59904.1| membrane protein OxaA [Burkholderia mallei JHU]
gi|148028819|gb|EDK86751.1| membrane protein OxaA [Burkholderia mallei 2002721280]
gi|160695856|gb|EDP85826.1| inner membrane protein, 60 kDa [Burkholderia mallei ATCC 10399]
gi|238520165|gb|EEP83627.1| inner membrane protein, 60 kDa [Burkholderia mallei GB8 horse 4]
gi|243063003|gb|EES45189.1| membrane protein OxaA [Burkholderia mallei PRL-20]
Length = 558
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 37/220 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 368 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 427
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 428 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 462
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D L D Y +LPVL+ VS ++ K+ N P + F+
Sbjct: 463 APWVLWIHD----LSQRD--PYFILPVLMAVSMFVQTKL-----NPTPPDPVQAKMMMFM 511
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK-FGGA 339
P+ P+GL LY+ NN+LS AQQ ++ + GGA
Sbjct: 512 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLGGA 551
>gi|386384871|ref|ZP_10070212.1| putative inner membrane protein translocase component YidC
[Streptomyces tsukubaensis NRRL18488]
gi|385667666|gb|EIF91068.1| putative inner membrane protein translocase component YidC
[Streptomyces tsukubaensis NRRL18488]
Length = 422
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 115/226 (50%), Gaps = 18/226 (7%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L V+++ PL KQ++S M++L P++KAIQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVVLIRICLIPLFVKQIKSMRNMQALQPKMKAIQERYKNDRQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ-N 237
YK G NPL+ CLP LA P + LY LS +A ++ G P LA +ARQ +
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYYVLSKIASGDVV--GVINEPLLA-----SARQAH 148
Query: 238 GSGISWLFPFVDGHPPLGWSDT------FAYLVLPVLLVVSQ-YISVKIIQSSQN---ND 287
G F D + D ++ +L+ SQ Y +++Q + +
Sbjct: 149 IFGAPLAAKFTDSPEKVQALDASLTDVRVVTAIMIILMSASQFYTQRQLMQKNVDLTVKT 208
Query: 288 PNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P++ ++ P G+ +YW T N+ + QQ+++
Sbjct: 209 PYMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTNVWTMGQQMYV 254
>gi|422810884|ref|ZP_16859295.1| membrane protein oxaA 1 precursor [Listeria monocytogenes FSL
J1-208]
gi|378751089|gb|EHY61680.1| membrane protein oxaA 1 precursor [Listeria monocytogenes FSL
J1-208]
Length = 287
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 109/214 (50%), Gaps = 39/214 (18%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGD----QERIQLET 175
+Y II++T++++ PL KQ++S AM +L P++K +QE+Y+ ++++Q ET
Sbjct: 64 SYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQET 123
Query: 176 ARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAAR 235
RLY+ +NP+ GCLP L +P+ +G Y+A+S A+ + T+ F W+ L P
Sbjct: 124 MRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDSFLWM-QLGNPD----- 175
Query: 236 QNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
Y +LP++ ++ ++S KI Q KS
Sbjct: 176 -------------------------PYYILPIVAALTTFLSSKISMMGQTQQN--KSMAM 208
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
+ +P+MI + +++PS L+LYW N+ + Q
Sbjct: 209 IVYIMPVMILFMGITLPSALALYWIIGNIFTVFQ 242
>gi|260893979|ref|YP_003240076.1| YidC/Oxa1 family membrane protein insertase [Ammonifex degensii
KC4]
gi|260866120|gb|ACX53226.1| membrane protein insertase, YidC/Oxa1 family [Ammonifex degensii
KC4]
Length = 231
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 119/235 (50%), Gaps = 34/235 (14%)
Query: 101 METVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAI 160
M T+L+ L + VP YG AII+LT++V+ FPL +Q+ S +A++ L P++K +
Sbjct: 12 MATLLEWLYKVTVAIGVP-NYGLAIIMLTILVRLVLFPLNYRQMRSVVALQQLHPKIKEL 70
Query: 161 QERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF 220
QERY D +++Q + LY+ +NP+AGCLP L +P+ I LYRAL + F
Sbjct: 71 QERYKQDPQKLQQKLMELYREHNVNPMAGCLPLLIQLPILIALYRALLSFPYTVAEHARF 130
Query: 221 FWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKII 280
W+PSL S T Y +LPVL V+ Y +KI
Sbjct: 131 LWVPSL------------------------------SHTDPYFILPVLAGVTTYWQMKIT 160
Query: 281 QSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+ + + L + MI + + ++P+GL+LYW NL+S AQQ + K
Sbjct: 161 PQAAGQEQQQRMMGILMSG---MILWISATLPAGLALYWVVYNLISVAQQYFFNK 212
>gi|167908935|ref|ZP_02496026.1| putative inner membrane protein translocase component YidC
[Burkholderia pseudomallei 112]
Length = 486
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 37/220 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 296 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 355
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 356 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 390
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D S Y +LPVL+ VS ++ K+ N P + F+
Sbjct: 391 APWVLWIHD------LSQRDPYFILPVLMAVSMFVQTKL-----NPTPPDPVQAKMMMFM 439
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK-FGGA 339
P+ P+GL LY+ NN+LS AQQ ++ + GGA
Sbjct: 440 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLGGA 479
>gi|167822122|ref|ZP_02453593.1| putative inner membrane protein translocase component YidC
[Burkholderia pseudomallei 9]
Length = 492
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 37/220 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 302 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 361
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 362 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 396
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D S Y +LPVL+ VS ++ K+ N P + F+
Sbjct: 397 APWVLWIHD------LSQRDPYFILPVLMAVSMFVQTKL-----NPTPPDPVQAKMMMFM 445
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK-FGGA 339
P+ P+GL LY+ NN+LS AQQ ++ + GGA
Sbjct: 446 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLGGA 485
>gi|167717468|ref|ZP_02400704.1| putative inner membrane protein translocase component YidC
[Burkholderia pseudomallei DM98]
Length = 454
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 37/220 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 264 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 323
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 324 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 358
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D S Y +LPVL+ VS ++ K+ N P + F+
Sbjct: 359 APWVLWIHD------LSQRDPYFILPVLMAVSMFVQTKL-----NPTPPDPVQAKMMMFM 407
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK-FGGA 339
P+ P+GL LY+ NN+LS AQQ ++ + GGA
Sbjct: 408 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLGGA 447
>gi|377822210|ref|YP_004978581.1| putative inner membrane protein translocase component YidC
[Burkholderia sp. YI23]
gi|357937045|gb|AET90604.1| putative inner membrane protein translocase component YidC
[Burkholderia sp. YI23]
Length = 556
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 104/219 (47%), Gaps = 38/219 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLTV++KA FPL+ +S M+ + P+++ I+ER D +++ LYK
Sbjct: 368 WGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQQIRERLKSDPQKMNAALMELYK 427
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRAL-SNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
+NP GCLP + IPV+I LY L S+V G WI L+ +Q+
Sbjct: 428 TEKVNPFGGCLPVVVQIPVFISLYWVLLSSVEMRG--APWILWIHDLS-------QQD-- 476
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
Y +LPVL+ VS ++ K+ N P + F
Sbjct: 477 ---------------------PYFILPVLMAVSMFVQTKL-----NPTPPDPVQAKMMMF 510
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGG 338
+P+ P+GL LY+ NN+LS AQQ ++ + G
Sbjct: 511 MPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 549
>gi|337265182|ref|YP_004609237.1| membrane protein insertase, YidC/Oxa1 family domain containing
[Mesorhizobium opportunistum WSM2075]
gi|336025492|gb|AEH85143.1| membrane protein insertase, YidC/Oxa1 family domain containing
[Mesorhizobium opportunistum WSM2075]
Length = 603
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 108/220 (49%), Gaps = 17/220 (7%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI+ TVIVKA FPL K S M+ + P++ I+E+YA D+ + Q LYK
Sbjct: 382 FGLAILATTVIVKALFFPLANKSYASMANMKKVQPKMLEIREKYADDKMKQQQAMMELYK 441
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPLAGC P IPV+ LY+ L + E F WI LA P + +
Sbjct: 442 TEKINPLAGCWPVALQIPVFFSLYKVLY-ITIEMRHAPFFGWIQDLAAP-------DPTS 493
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I LF V P+ V P+++ V+ ++ +++ N P + A+ ++
Sbjct: 494 IFNLFGLV----PVTLPHMLMIGVWPLIMGVTMFLQMRM-----NPTPPDPTQAAIFTWM 544
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAK 340
P++ + P+GL +YW NN LS QQ + K GAK
Sbjct: 545 PVIFTFMMAGFPAGLVIYWAWNNTLSILQQGLIMKRQGAK 584
>gi|431932942|ref|YP_007245988.1| preprotein translocase subunit YidC [Thioflavicoccus mobilis 8321]
gi|431831245|gb|AGA92358.1| preprotein translocase subunit YidC [Thioflavicoccus mobilis 8321]
Length = 546
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 104/215 (48%), Gaps = 36/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G++IILLTV++KA + L+ S MR LAP+++A+++RY D+ER+ LY+
Sbjct: 360 WGWSIILLTVLIKALFYKLSATSYRSMAGMRKLAPRLQALKDRYGDDKERLNQAMMDLYR 419
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP L IPV+I LY L + E FW+ +L+ P
Sbjct: 420 KEKINPLGGCLPILIQIPVFIALYWVLIE-SVELRHAPFMFWLNNLSAPD---------- 468
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
Y VLP+++ +S + IQ+ N P + L
Sbjct: 469 --------------------PYYVLPLVMGISMF-----IQTRLNPTPPDPIQAKVMQSL 503
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P + F P+GL LYW NN+LS AQQ ++ K
Sbjct: 504 PFVFTVFFSFFPAGLVLYWTVNNILSIAQQWFIMK 538
>gi|410453617|ref|ZP_11307565.1| OxaA-like protein precursor [Bacillus bataviensis LMG 21833]
gi|409932972|gb|EKN69920.1| OxaA-like protein precursor [Bacillus bataviensis LMG 21833]
Length = 257
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 117/232 (50%), Gaps = 42/232 (18%)
Query: 107 VLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAG 166
V+K+G L +YG ++I++T++++ A PL KQ SS AM++L P++KA++E+Y+
Sbjct: 47 VIKEGAHLLGG--SYGLSLIVVTILIRLAILPLMIKQTRSSKAMQALQPEMKALREKYSS 104
Query: 167 D----QERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFW 222
Q+++Q ET L+ G+NP+AGC P + +P+ IG Y A+S + + + F W
Sbjct: 105 KDQKTQQKLQQETMALFSKHGVNPMAGCFPLIVQMPILIGFYHAISRTRE--IAQDSFLW 162
Query: 223 IPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQS 282
LG D Y +LP++ V+ +I K++ +
Sbjct: 163 F-----------------------------DLGEKD--PYFILPIIAGVTTFIQQKMMMA 191
Query: 283 SQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
Q +P M + +MI +FA S P+ LSLYW N+ Q +++
Sbjct: 192 GQQQNPQMAMMIWMMP---IMIMFFAFSFPAALSLYWVVGNIFMIVQTYFIK 240
>gi|126439633|ref|YP_001057148.1| inner membrane protein translocase component YidC [Burkholderia
pseudomallei 668]
gi|166975856|sp|A3N477.1|YIDC_BURP6 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|126219126|gb|ABN82632.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
pseudomallei 668]
Length = 558
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 37/220 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 368 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 427
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 428 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 462
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D L D Y +LPVL+ VS ++ K+ N P + F+
Sbjct: 463 APWVLWIHD----LSQRD--PYFILPVLMAVSMFVQTKL-----NPTPPDPVQAKMMMFM 511
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK-FGGA 339
P+ P+GL LY+ NN+LS AQQ ++ + GGA
Sbjct: 512 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLGGA 551
>gi|53717718|ref|YP_106704.1| inner membrane protein translocase component YidC [Burkholderia
pseudomallei K96243]
gi|76811170|ref|YP_331720.1| inner membrane protein translocase component YidC [Burkholderia
pseudomallei 1710b]
gi|126453447|ref|YP_001064392.1| inner membrane protein translocase component YidC [Burkholderia
pseudomallei 1106a]
gi|167813580|ref|ZP_02445260.1| putative inner membrane protein translocase component YidC
[Burkholderia pseudomallei 91]
gi|167892205|ref|ZP_02479607.1| putative inner membrane protein translocase component YidC
[Burkholderia pseudomallei 7894]
gi|167900716|ref|ZP_02487921.1| putative inner membrane protein translocase component YidC
[Burkholderia pseudomallei NCTC 13177]
gi|167916975|ref|ZP_02504066.1| putative inner membrane protein translocase component YidC
[Burkholderia pseudomallei BCC215]
gi|217423939|ref|ZP_03455439.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
pseudomallei 576]
gi|226193291|ref|ZP_03788901.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
pseudomallei Pakistan 9]
gi|237810283|ref|YP_002894734.1| putative inner membrane protein translocase component YidC
[Burkholderia pseudomallei MSHR346]
gi|242316035|ref|ZP_04815051.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
pseudomallei 1106b]
gi|254184152|ref|ZP_04890743.1| membrane protein OxaA [Burkholderia pseudomallei 1655]
gi|254186623|ref|ZP_04893140.1| membrane protein OxaA [Burkholderia pseudomallei Pasteur 52237]
gi|254194722|ref|ZP_04901153.1| membrane protein OxaA [Burkholderia pseudomallei S13]
gi|254262072|ref|ZP_04953126.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
pseudomallei 1710a]
gi|254298582|ref|ZP_04966033.1| membrane protein OxaA [Burkholderia pseudomallei 406e]
gi|386860207|ref|YP_006273156.1| inner membrane protein translocase component YidC [Burkholderia
pseudomallei 1026b]
gi|403516761|ref|YP_006650894.1| inner membrane protein translocase component YidC [Burkholderia
pseudomallei BPC006]
gi|418375504|ref|ZP_12965584.1| inner membrane protein translocase component YidC [Burkholderia
pseudomallei 354a]
gi|418537435|ref|ZP_13103075.1| inner membrane protein translocase component YidC [Burkholderia
pseudomallei 1026a]
gi|418539574|ref|ZP_13105165.1| inner membrane protein translocase component YidC [Burkholderia
pseudomallei 1258a]
gi|418545734|ref|ZP_13110981.1| inner membrane protein translocase component YidC [Burkholderia
pseudomallei 1258b]
gi|418552148|ref|ZP_13117040.1| inner membrane protein translocase component YidC [Burkholderia
pseudomallei 354e]
gi|81690513|sp|Q63YW1.1|YIDC_BURPS RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|123600731|sp|Q3JXI3.1|YIDC_BURP1 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|166975855|sp|A3NPX1.1|YIDC_BURP0 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|52208132|emb|CAH34062.1| putative membrane protein [Burkholderia pseudomallei K96243]
gi|76580623|gb|ABA50098.1| inner membrane protein, 60 kDa [Burkholderia pseudomallei 1710b]
gi|126227089|gb|ABN90629.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
pseudomallei 1106a]
gi|157808712|gb|EDO85882.1| membrane protein OxaA [Burkholderia pseudomallei 406e]
gi|157934308|gb|EDO89978.1| membrane protein OxaA [Burkholderia pseudomallei Pasteur 52237]
gi|169651472|gb|EDS84165.1| membrane protein OxaA [Burkholderia pseudomallei S13]
gi|184214684|gb|EDU11727.1| membrane protein OxaA [Burkholderia pseudomallei 1655]
gi|217393002|gb|EEC33024.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
pseudomallei 576]
gi|225934891|gb|EEH30868.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
pseudomallei Pakistan 9]
gi|237503961|gb|ACQ96279.1| inner membrane protein OxaA [Burkholderia pseudomallei MSHR346]
gi|242139274|gb|EES25676.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
pseudomallei 1106b]
gi|254220761|gb|EET10145.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
pseudomallei 1710a]
gi|385350144|gb|EIF56696.1| inner membrane protein translocase component YidC [Burkholderia
pseudomallei 1026a]
gi|385364328|gb|EIF70046.1| inner membrane protein translocase component YidC [Burkholderia
pseudomallei 1258a]
gi|385366397|gb|EIF72019.1| inner membrane protein translocase component YidC [Burkholderia
pseudomallei 1258b]
gi|385373609|gb|EIF78625.1| inner membrane protein translocase component YidC [Burkholderia
pseudomallei 354e]
gi|385378292|gb|EIF82767.1| inner membrane protein translocase component YidC [Burkholderia
pseudomallei 354a]
gi|385657335|gb|AFI64758.1| inner membrane protein translocase component YidC [Burkholderia
pseudomallei 1026b]
gi|403072405|gb|AFR13985.1| putative inner membrane protein translocase component YidC
[Burkholderia pseudomallei BPC006]
Length = 558
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 37/220 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+++KA FPL+ +S M+ + P+++A++ER+ D +++ LYK
Sbjct: 368 WGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYK 427
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NP GCLP + IPV+I LY W+ + A G
Sbjct: 428 TEKVNPFGGCLPVVIQIPVFISLY-----------------WV--------LLASVEMRG 462
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D L D Y +LPVL+ VS ++ K+ N P + F+
Sbjct: 463 APWVLWIHD----LSQRD--PYFILPVLMAVSMFVQTKL-----NPTPPDPVQAKMMMFM 511
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK-FGGA 339
P+ P+GL LY+ NN+LS AQQ ++ + GGA
Sbjct: 512 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLGGA 551
>gi|257095987|ref|YP_003169628.1| 60 kDa inner membrane insertion protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257048511|gb|ACV37699.1| 60 kDa inner membrane insertion protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 560
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 106/222 (47%), Gaps = 38/222 (17%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+ +K FPL+ +S MR++ P++ A++ERY D++++ E LYK
Sbjct: 368 WGWAIVLLTIGIKLLFFPLSAASYKSMAKMRTVTPRLMALKERYGDDRQKLNQEMMALYK 427
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INPL GCLP IPV+I LY AL + ++
Sbjct: 428 REKINPLGGCLPIAVQIPVFIALYWALLGAVE----------------------IRDAPW 465
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
I W+ P Y VLPV++VV+ +IQ+ N P + +
Sbjct: 466 ILWITDLSAQDP---------YYVLPVIMVVTM-----LIQTKLNPTPPDPIQAKVMMMM 511
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKF--GGAK 340
P + G P+GL LYW NN+LS AQQ + + GGAK
Sbjct: 512 PFIFGAMFFFFPAGLVLYWVVNNVLSIAQQWQITRMIEGGAK 553
>gi|424865250|ref|ZP_18289119.1| inner membrane protein OxaA [SAR86 cluster bacterium SAR86B]
gi|400758856|gb|EJP73056.1| inner membrane protein OxaA [SAR86 cluster bacterium SAR86B]
Length = 496
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 34/219 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G +I++ T+++K FP+T K +S AMR P++K +Q+RY D+++I ET R+Y+
Sbjct: 312 WGVSIVIFTILLKLLLFPVTGKGFKSMAAMRKAMPELKEVQDRYKNDRQKIGTETLRIYR 371
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NP+ GCLP +A +P ++ L+ L + E + FFWI L+ P
Sbjct: 372 KYGANPIGGCLPLIAQLPFFVALFFGLREMV-ELRYSPFFFWIQDLSAPD---------- 420
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
PL +LP L + ++ K+ N DP Q + +
Sbjct: 421 ------------PL--------FILPALFGLIMVLTQKLNPQPPNMDP---MQQNIMKVM 457
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGA 339
P+M F + PS L+LY N +S QQ L K GA
Sbjct: 458 PVMFSLFFIFFPSALALYSVVNGAVSLVQQRALYKRLGA 496
>gi|420452823|ref|ZP_14951664.1| inner membrane protein oxaA [Helicobacter pylori Hp A-6]
gi|393066636|gb|EJB67455.1| inner membrane protein oxaA [Helicobacter pylori Hp A-6]
Length = 547
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTLFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|163868925|ref|YP_001610152.1| putative inner membrane protein translocase component YidC
[Bartonella tribocorum CIP 105476]
gi|161018599|emb|CAK02157.1| translocase precursor subunit [Bartonella tribocorum CIP 105476]
Length = 620
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 121/251 (48%), Gaps = 29/251 (11%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W IT M ++ +L +G AI+L+TV++K FPL K +S M+
Sbjct: 369 WFDFITKPMFALIDILYKQTGN------FGIAILLVTVLLKILLFPLANKSYQSMARMKL 422
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P++ I+E+Y D+ + Q LYK INPLAGC P L P++ LY+ L +
Sbjct: 423 LQPRLLEIKEKYPDDKNKQQQAIIELYKTEKINPLAGCWPMLVQFPIFFALYKVLY-ITI 481
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYLVL---PVLL 269
E F WI LA P + N G L P+ T A+L++ P+++
Sbjct: 482 EMRHAPFFGWIQDLAAPDPTSLF-NLFG---LLPYT----------TPAFLMIGAWPLIM 527
Query: 270 VVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQ 329
++ ++ +++ N P ++ + ++P++ + S P GL +YW NN+LS Q
Sbjct: 528 GITMFLQMRM-----NPAPQDQTQAMIFTWMPVVFTFMLASFPVGLVIYWAWNNILSIIQ 582
Query: 330 QVWLQKFGGAK 340
Q + K GAK
Sbjct: 583 QGIMMKRQGAK 593
>gi|429760959|ref|ZP_19293406.1| putative stage III sporulation protein J [Veillonella atypica KON]
gi|429176052|gb|EKY17457.1| putative stage III sporulation protein J [Veillonella atypica KON]
Length = 244
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 98/199 (49%), Gaps = 34/199 (17%)
Query: 138 PLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATI 197
PLT KQ++S AM+ L P++K +QE+Y D +R+Q E +YK G+NPLAGCLP L +
Sbjct: 73 PLTVKQIKSMKAMQELQPRMKELQEKYKNDPQRLQAEMGAMYKEMGVNPLAGCLPLLVQM 132
Query: 198 PVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWS 257
P I ++ AL E F W+PSL G +
Sbjct: 133 PFLIAIFYALQGYPYNPEF-EHFLWLPSL----------------------------GEA 163
Query: 258 DTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTN-FLPLMIGYFALSVPSGLS 316
D Y +LPVL +S ++ + Q+ Q + F+PL IGY +L+ PSGL
Sbjct: 164 D--PYYILPVLSALSTWLMSR--QTGMGASGAAAQQQKIMQIFMPLFIGYISLNFPSGLV 219
Query: 317 LYWFTNNLLSTAQQVWLQK 335
+YW +N+ QQ ++ K
Sbjct: 220 IYWIVSNVFQLVQQHFIYK 238
>gi|297627570|ref|YP_003689333.1| hypothetical protein PFREUD_24190 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296923335|emb|CBL57936.1| Conserved membrane protein [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 355
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 152/340 (44%), Gaps = 53/340 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+ AI+LLT ++ PL KQ+ SS AM+S+ P+V+ +Q++Y D+ER+ ET +LY
Sbjct: 45 WTLAIVLLTCFIRLLMMPLYAKQLNSSRAMQSIQPKVEELQKKYGSDRERLGQETMKLYN 104
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWI-------PSLAGPTTIA 233
G+NP + CLP L +P++ L+R LS+ A + + +W+ SL+
Sbjct: 105 EEGVNPASSCLPLLIQLPIFWALFRVLSSAASDRNVHG--YWLQRSPEITASLSHADLFG 162
Query: 234 ARQNGSGISWLFPFVDGHPPL-GWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKS 292
A+ +G+ +P G G++ A L+ ++ V ++ + + + P +
Sbjct: 163 AKLSGT----FWPLTGGFGATQGFALALAILMTGLMFVQQLHMLKRNMPPAAQTGPMAQQ 218
Query: 293 SQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKD 352
+ + PLM + +++P G+ LYW N+ + AQQ II+
Sbjct: 219 QKMMLYMFPLMYLFGGMAMPIGVLLYWLATNIWTMAQQY----------------VIIR- 261
Query: 353 ERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRRQQREEEKRKAAEA 412
N PG T E++ +G P RE E R RQ R + +A+
Sbjct: 262 -----NYPTPG---TPAYIEWEERMKEQGKDP-------REIE-RARQNRGRKHPRASNK 305
Query: 413 AAKGNQTINGEQEREASILGSAKGVQTDLVDKDDENFPSV 452
A+ NG + S + Q V +DD + +V
Sbjct: 306 TAQAKTDENGR------TVVSRQSTQRTTVRRDDSDRQTV 339
>gi|221640557|ref|YP_002526819.1| putative inner membrane protein translocase component YidC
[Rhodobacter sphaeroides KD131]
gi|254773018|sp|B9KNZ6.1|YIDC_RHOSK RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|221161338|gb|ACM02318.1| Inner membrane protein oxaA [Rhodobacter sphaeroides KD131]
Length = 623
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 140/302 (46%), Gaps = 41/302 (13%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W +T + TVL L + + G AII LT ++KA PL K S M+
Sbjct: 357 WFFFLTKPIFTVLHWLNHMIGNM------GLAIIALTFLLKALVLPLAYKSYVSMARMKE 410
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+++A++ER D+ +Q E RLYK +NP AGCLP L IP++ LY+ + V
Sbjct: 411 LQPELEALRERAGDDKMLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIF-VTI 469
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVV 271
E F W+ L+ P ++ N G++ P+ P G + ++ LP+LL V
Sbjct: 470 ELRHAPFFGWLKDLSAPDP-SSIFNFFGLA---PWAAPTP--GTTMALIFIGALPILLGV 523
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLP----LMIGYFALSVPSGLSLYWFTNNLLST 327
S ++ K+ N P K+ + ++P M+G+FA SGL LYW NNL++
Sbjct: 524 SMWLQQKL-----NPAPGDKAQAMIFAWMPWVFMFMLGHFA----SGLVLYWIVNNLITF 574
Query: 328 AQQVWLQKFGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEK 387
QQ + + G DI ++ S K A+ A K +G P +K
Sbjct: 575 TQQYVIMRSHG--------------HHPDIFGNIKASFSRKPAAQPAGKAANDGAAPAKK 620
Query: 388 FK 389
K
Sbjct: 621 RK 622
>gi|429207204|ref|ZP_19198463.1| Inner membrane protein translocase component YidC, long form
[Rhodobacter sp. AKP1]
gi|428189579|gb|EKX58132.1| Inner membrane protein translocase component YidC, long form
[Rhodobacter sp. AKP1]
Length = 626
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 140/302 (46%), Gaps = 41/302 (13%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W +T + TVL L + + G AII LT ++KA PL K S M+
Sbjct: 360 WFFFLTKPIFTVLHWLNHMIGNM------GLAIIALTFLLKALVLPLAYKSYVSMARMKE 413
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+++A++ER D+ +Q E RLYK +NP AGCLP L IP++ LY+ + V
Sbjct: 414 LQPELEALRERAGDDKMLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIF-VTI 472
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVV 271
E F W+ L+ P ++ N G++ P+ P G + ++ LP+LL V
Sbjct: 473 ELRHAPFFGWLKDLSAPDP-SSIFNFFGLA---PWAAPTP--GTTMALIFIGALPILLGV 526
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLP----LMIGYFALSVPSGLSLYWFTNNLLST 327
S ++ K+ N P K+ + ++P M+G+FA SGL LYW NNL++
Sbjct: 527 SMWLQQKL-----NPAPGDKAQAMIFAWMPWVFMFMLGHFA----SGLVLYWIVNNLITF 577
Query: 328 AQQVWLQKFGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEK 387
QQ + + G DI ++ S K A+ A K +G P +K
Sbjct: 578 TQQYVIMRSHG--------------HHPDIFGNIKASFSRKPAAQPAGKAANDGAAPAKK 623
Query: 388 FK 389
K
Sbjct: 624 RK 625
>gi|126463485|ref|YP_001044599.1| putative inner membrane protein translocase component YidC
[Rhodobacter sphaeroides ATCC 17029]
gi|166977405|sp|A3PNB1.1|YIDC_RHOS1 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|126105149|gb|ABN77827.1| protein translocase subunit yidC [Rhodobacter sphaeroides ATCC
17029]
Length = 623
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 140/302 (46%), Gaps = 41/302 (13%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W +T + TVL L + + G AII LT ++KA PL K S M+
Sbjct: 357 WFFFLTKPIFTVLHWLNHMIGNM------GLAIIALTFLLKALVLPLAYKSYVSMARMKE 410
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+++A++ER D+ +Q E RLYK +NP AGCLP L IP++ LY+ + V
Sbjct: 411 LQPELEALRERAGDDKMLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIF-VTI 469
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVV 271
E F W+ L+ P ++ N G++ P+ P G + ++ LP+LL V
Sbjct: 470 ELRHAPFFGWLKDLSAPDP-SSIFNFFGLA---PWAAPTP--GTTMALIFIGALPILLGV 523
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLP----LMIGYFALSVPSGLSLYWFTNNLLST 327
S ++ K+ N P K+ + ++P M+G+FA SGL LYW NNL++
Sbjct: 524 SMWLQQKL-----NPAPGDKAQAMIFAWMPWVFMFMLGHFA----SGLVLYWIVNNLITF 574
Query: 328 AQQVWLQKFGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEK 387
QQ + + G DI ++ S K A+ A K +G P +K
Sbjct: 575 TQQYVIMRSHG--------------HHPDIFGNIKASFSRKPAAQPAGKAANDGAAPAKK 620
Query: 388 FK 389
K
Sbjct: 621 RK 622
>gi|317484430|ref|ZP_07943344.1| YidC/Oxa1 family membrane protein insertase [Bilophila wadsworthia
3_1_6]
gi|345888294|ref|ZP_08839394.1| membrane protein oxaA [Bilophila sp. 4_1_30]
gi|316924318|gb|EFV45490.1| YidC/Oxa1 family membrane protein insertase [Bilophila wadsworthia
3_1_6]
gi|345040891|gb|EGW45108.1| membrane protein oxaA [Bilophila sp. 4_1_30]
Length = 534
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 112/216 (51%), Gaps = 30/216 (13%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AI++LT ++ +PL++K +S M+ L P +K ++E++ D+E + E +LYK
Sbjct: 346 WGIAILMLTFCIRVVFWPLSQKSFKSMEQMKKLQPMMKKLREKHKDDKEALNKEMMQLYK 405
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFF-WIPSLAGPTTIAARQNGS 239
+NP GCLP + IPV+IGLY+AL N + L F ++P +
Sbjct: 406 TYKVNPAGGCLPIVVQIPVFIGLYQALLNSIE--LRHASFIEYLPF-------------T 450
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
I+WL P + + P+L+ S ++ ++ ++ DP + Q + F
Sbjct: 451 HITWLADLSAADP---------FYITPLLMGASMFLQQRLTPAA--GDP---TQQKVMMF 496
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
+P++ ++ P+GL +YW NN+LS QQ W+ +
Sbjct: 497 MPVIFTVMFINFPAGLVIYWLCNNILSIGQQWWMLR 532
>gi|421715882|ref|ZP_16155194.1| inner membrane protein oxaA [Helicobacter pylori R037c]
gi|407221780|gb|EKE91583.1| inner membrane protein oxaA [Helicobacter pylori R037c]
Length = 548
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 35/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT+IV+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQAHMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+L+ S Y QS N + L
Sbjct: 459 ------IMD-----------PYFILPLLMGASMYWH----QSVTPNTMTDPMQAKIFKLL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
PL+ F ++ P+GL LYW TNN+LS QQ+ + K
Sbjct: 498 PLLFTLFLITFPAGLVLYWTTNNILSVLQQLIINK 532
>gi|332559538|ref|ZP_08413860.1| membrane protein insertase [Rhodobacter sphaeroides WS8N]
gi|332277250|gb|EGJ22565.1| membrane protein insertase [Rhodobacter sphaeroides WS8N]
Length = 623
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 140/302 (46%), Gaps = 41/302 (13%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W +T + TVL L + + G AII LT ++KA PL K S M+
Sbjct: 357 WFFFLTKPIFTVLHWLNHMIGNM------GLAIIALTFLLKALVLPLAYKSYVSMARMKE 410
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+++A++ER D+ +Q E RLYK +NP AGCLP L IP++ LY+ + V
Sbjct: 411 LQPELEALRERAGDDKMLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIF-VTI 469
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVV 271
E F W+ L+ P ++ N G++ P+ P G + ++ LP+LL V
Sbjct: 470 ELRHAPFFGWLKDLSAPDP-SSIFNFFGLA---PWAAPTP--GTTMALIFIGALPILLGV 523
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLP----LMIGYFALSVPSGLSLYWFTNNLLST 327
S ++ K+ N P K+ + ++P M+G+FA SGL LYW NNL++
Sbjct: 524 SMWLQQKL-----NPAPGDKAQAMIFAWMPWVFMFMLGHFA----SGLVLYWIVNNLITF 574
Query: 328 AQQVWLQKFGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEK 387
QQ + + G DI ++ S K A+ A K +G P +K
Sbjct: 575 TQQYVIMRSHG--------------HHPDIFGNIKASFSRKPAAQPAGKAANDGAAPAKK 620
Query: 388 FK 389
K
Sbjct: 621 RK 622
>gi|77464645|ref|YP_354149.1| inner membrane protein translocase component YidC [Rhodobacter
sphaeroides 2.4.1]
gi|123590899|sp|Q3IYY6.1|YIDC_RHOS4 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|77389063|gb|ABA80248.1| protein translocase subunit yidC [Rhodobacter sphaeroides 2.4.1]
Length = 623
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 140/302 (46%), Gaps = 41/302 (13%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W +T + TVL L + + G AII LT ++KA PL K S M+
Sbjct: 357 WFFFLTKPIFTVLHWLNHMIGNM------GLAIIALTFLLKALVLPLAYKSYVSMARMKE 410
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
L P+++A++ER D+ +Q E RLYK +NP AGCLP L IP++ LY+ + V
Sbjct: 411 LQPELEALRERAGDDKMLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIF-VTI 469
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVV 271
E F W+ L+ P ++ N G++ P+ P G + ++ LP+LL V
Sbjct: 470 ELRHAPFFGWLKDLSAPDP-SSIFNFFGLA---PWAAPTP--GTTMALIFIGALPILLGV 523
Query: 272 SQYISVKIIQSSQNNDPNMKSSQALTNFLP----LMIGYFALSVPSGLSLYWFTNNLLST 327
S ++ K+ N P K+ + ++P M+G+FA SGL LYW NNL++
Sbjct: 524 SMWLQQKL-----NPAPGDKAQAMIFAWMPWVFMFMLGHFA----SGLVLYWIVNNLITF 574
Query: 328 AQQVWLQKFGGAKDPMKQFSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEK 387
QQ + + G DI ++ S K A+ A K +G P +K
Sbjct: 575 TQQYVIMRSHG--------------HHPDIFGNIKASFSRKPAAQPAGKAANDGAAPAKK 620
Query: 388 FK 389
K
Sbjct: 621 RK 622
>gi|403049342|ref|ZP_10903826.1| membrane protein insertase [SAR86 cluster bacterium SAR86D]
Length = 520
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 35/222 (15%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLY 179
++ F+II+ T+++K FP+T K S MR + P++K IQ+RY D++R E LY
Sbjct: 327 SWAFSIIIFTLLLKLVLFPVTAKGFVSMAGMRKIGPKMKDIQDRYKNDRQRASAEVMALY 386
Query: 180 KLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
K G+NPL GCLP LA +P +IG + AL + + L F+WI L+ P
Sbjct: 387 KKEGVNPLGGCLPVLAQMPFFIGFFFALREMVE--LRHASFYWISDLSIPD--------- 435
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
PL +LPV+ + + K+ + DP + + +
Sbjct: 436 -------------PL--------FILPVVFGMVMVFTQKLSPAPPTTDP---TQAQVMKY 471
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKD 341
+P++ F P+GL LY N+ S QQ +L + GA D
Sbjct: 472 MPVIFSIFFFIFPAGLCLYSVINSGFSLGQQRYLYRKTGALD 513
>gi|86160773|ref|YP_467558.1| protein translocase subunit yidC [Anaeromyxobacter dehalogenans
2CP-C]
gi|123750290|sp|Q2IHR0.1|YIDC_ANADE RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|85777284|gb|ABC84121.1| protein translocase subunit yidC [Anaeromyxobacter dehalogenans
2CP-C]
Length = 545
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 104/215 (48%), Gaps = 36/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLTV+V+ FPLT K ++S MR L P+++ ++ ++ D+E++ L +LY+
Sbjct: 355 WGVAIILLTVLVRLVLFPLTYKSMQSMNEMRKLQPEIEKLKAKFGDDREKMNLAVMQLYQ 414
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPL GCLP L +PVW LY AL + L E F W+ L
Sbjct: 415 KHKVNPLGGCLPMLLQMPVWFALYAALQTSVE--LYREPFLWMKDLT------------- 459
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
H P Y +LP+ + +S ++ K+ +N ++ + F
Sbjct: 460 ---------AHDP--------YFILPIAMGISSFVMQKLSPQPADN----AQAKMMLYFF 498
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P L VP GL+LY F NNLLS QQ + K
Sbjct: 499 PGFFTVIMLFVPGGLTLYIFVNNLLSIVQQQLMMK 533
>gi|313144326|ref|ZP_07806519.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313129357|gb|EFR46974.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|396079055|dbj|BAM32431.1| conserved hypothetical protein [Helicobacter cinaedi ATCC BAA-847]
Length = 599
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 124/255 (48%), Gaps = 40/255 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT+IV+ +PLT + + S ++ LAP++K +Q RY D +++Q+ LYK
Sbjct: 383 WGWAIVLLTLIVRVVLYPLTYRGMVSMQKLKDLAPKMKELQARYKDDPQKLQIHMMDLYK 442
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NP+ GCLP + IPV+ +YR L N A E + WI L+
Sbjct: 443 KHGANPIGGCLPLILQIPVFFAIYRVLHN-AVELKSSAWILWIDDLSA------------ 489
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y VLPVL+ +S Y+S ++ S+ DP + + L
Sbjct: 490 -------ID-----------PYFVLPVLMGLSMYVSQRLTPSN-FTDP---MQEKIFKML 527
Query: 301 PLM--IGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQFSDIIKDERLDIN 358
P + I + P+GL LYW NN+ S QQ+ + K +K K + E+ + N
Sbjct: 528 PWVFTIFFIIFPFPAGLVLYWTVNNIFSIIQQMLINKVMESK---KAKEIALHHEKHEHN 584
Query: 359 KSVPGLSSTKKEARQ 373
K + K++ R+
Sbjct: 585 KESHKETHKKQKGRK 599
>gi|305667728|ref|YP_003864015.1| putative inner membrane protein translocase component YidC
[Maribacter sp. HTCC2170]
gi|88707565|gb|EAQ99807.1| putative inner membrane protein translocase component YidC
[Maribacter sp. HTCC2170]
Length = 619
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 112/226 (49%), Gaps = 19/226 (8%)
Query: 113 STLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQ 172
S L + YG AI+++T++V+ A P+T K S M+ L P++ + E+Y + + Q
Sbjct: 367 SLLSTYFPYGIAIVIMTILVRLAMSPVTYKSYLSQAKMKVLKPEISELGEKYKDNAMKKQ 426
Query: 173 LETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTI 232
ET +LY AG++P++GC+P +P++ L+ L + F W L+ TI
Sbjct: 427 QETMKLYNKAGVSPMSGCVPAFLQMPIFYALFMFFP--TSFALRQKAFLWADDLSSFDTI 484
Query: 233 AARQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQN--NDPNM 290
G I PF H L P+L V+ + + ++ + QN P M
Sbjct: 485 YQFPEGFSI----PFYGDHISL----------FPILASVAIFFYM-MMTTGQNMPQQPGM 529
Query: 291 KSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKF 336
+ + + +P M+ +F + SGLSLY+F +NL++ + +++F
Sbjct: 530 PNMKFIMYLMPFMMLFFFNNYASGLSLYYFVSNLITIGIMLVIKRF 575
>gi|409349180|ref|ZP_11232710.1| Membrane protein oxaA [Lactobacillus equicursoris CIP 110162]
gi|407878368|emb|CCK84768.1| Membrane protein oxaA [Lactobacillus equicursoris CIP 110162]
Length = 291
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 111/220 (50%), Gaps = 39/220 (17%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGD----QERIQLET 175
+YG+AI++ TVI++ PL Q+ S+ M+ + P++KA+QE+Y+G + ++ ET
Sbjct: 71 SYGWAIVIFTVIIRVILLPLNAMQINSTKKMQDVQPELKALQEKYSGSDLETKTKLNEET 130
Query: 176 ARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAAR 235
+LYK AG+NP AGCLP L +PV LY+A+ P L
Sbjct: 131 QKLYKEAGVNPYAGCLPMLIQLPVMWALYQAIWRT-------------PEL--------- 168
Query: 236 QNGSGISWLFPFVD-GHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQ 294
QNG F ++D G P Y VLP+L ++S I+ S ++
Sbjct: 169 QNGK-----FLWMDLGKPD-------PYYVLPILAAGFTFLSSYIMTLSTPKSSQTTMTK 216
Query: 295 ALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
A++ + +M+G +A+ S +SLYW +NL Q + LQ
Sbjct: 217 AMSYIMAIMVGVWAVVFQSAISLYWVISNLFQVVQTLILQ 256
>gi|302535577|ref|ZP_07287919.1| inner membrane protein [Streptomyces sp. C]
gi|302444472|gb|EFL16288.1| inner membrane protein [Streptomyces sp. C]
Length = 368
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 116/228 (50%), Gaps = 22/228 (9%)
Query: 119 YAYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARL 178
+A+G +I+ L ++++ PL KQ++++ M++L P++KAIQERY D++R E +L
Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRGMQALQPKMKAIQERYKNDKQRQSEEMMKL 95
Query: 179 YKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQ-N 237
YK G NPL+ CLP LA P + LY L+++A+ I + P +ARQ +
Sbjct: 96 YKETGTNPLSSCLPILAQSPFFFALYHVLASIANGKT-------IGVINQPLLESARQAH 148
Query: 238 GSGISWLFPFVDGHPPLGWSDT------FAYLVLPVLLVVSQYISVKIIQSSQNN----- 286
G F+D + D V+ V++ +SQ+ + + Q Q N
Sbjct: 149 IFGAPLAAKFMDSAEKVAALDASITNVRIVTAVMIVMMSLSQFYTQR--QLMQKNVDLSV 206
Query: 287 -DPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWL 333
P M+ + L P++ ++ P G+ +YW T N+ + QQ+++
Sbjct: 207 KTPFMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTNVWTMGQQMYV 254
>gi|260577136|ref|ZP_05845113.1| 60 kDa inner membrane insertion protein [Rhodobacter sp. SW2]
gi|259020610|gb|EEW23929.1| 60 kDa inner membrane insertion protein [Rhodobacter sp. SW2]
Length = 646
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 112/217 (51%), Gaps = 27/217 (12%)
Query: 122 GFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKL 181
G AII LT+++K FPL K S M+ L P+++A++ER D++++Q+E +LYK
Sbjct: 371 GLAIIGLTLVLKVIVFPLAYKSYVSMARMKELQPEIEAMKERVGDDKQKVQVEMMKLYKE 430
Query: 182 AGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGI 241
+NP AGCLP L IP++ LY+ + V E F W+ T ++AR + S
Sbjct: 431 KKVNPAAGCLPVLIQIPIFFSLYKVIF-VTLELRHAPFFGWL------TDLSARDSSS-- 481
Query: 242 SWLFPFVDGHPPLGWS--------DTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSS 293
LF F P W+ T +LP+LL +S ++ K+ N P +
Sbjct: 482 --LFNFFGLAP---WAAPEHGTLLATIFIGLLPILLGISMWLQQKL-----NPAPADPTQ 531
Query: 294 QALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
Q + ++P + + S SGL LYW TNN+++ QQ
Sbjct: 532 QMIFAWMPWVFMFMLGSFASGLVLYWITNNVITFTQQ 568
>gi|197124875|ref|YP_002136826.1| hypothetical protein AnaeK_4495 [Anaeromyxobacter sp. K]
gi|254772746|sp|B4UKG1.1|YIDC_ANASK RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|196174724|gb|ACG75697.1| 60 kDa inner membrane insertion protein [Anaeromyxobacter sp. K]
Length = 546
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 104/215 (48%), Gaps = 36/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLTV+V+ FPLT K ++S MR L P+++ ++ ++ D+E++ L +LY+
Sbjct: 356 WGVAIILLTVLVRLVLFPLTYKSMQSMNEMRKLQPEIEKLKAKFGDDREKMNLAVMQLYQ 415
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPL GCLP L +PVW LY AL + L E F W+ L
Sbjct: 416 KHKVNPLGGCLPMLLQMPVWFALYAALQTSVE--LYREPFLWMKDLT------------- 460
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
H P Y +LP+ + +S ++ K+ +N ++ + F
Sbjct: 461 ---------AHDP--------YFILPIAMGISSFVMQKLSPQPADN----AQAKMMLYFF 499
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P L VP GL+LY F NNLLS QQ + K
Sbjct: 500 PGFFTVIMLFVPGGLTLYIFVNNLLSIVQQQLMMK 534
>gi|269958897|ref|YP_003328686.1| inner membrane protein translocase component YidC [Anaplasma
centrale str. Israel]
gi|269848728|gb|ACZ49372.1| inner membrane protein translocase component YidC [Anaplasma
centrale str. Israel]
Length = 572
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 111/217 (51%), Gaps = 20/217 (9%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AII+LT+ +K FPL K S ++ L P++ I+E Y D RI E + L++
Sbjct: 363 FGLAIIMLTISIKLVVFPLASKSYVSMFKLKKLQPEISRIKELYKTDDVRIGKEISSLFR 422
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G++P++G LP L IPV+ LY+ L V E WI L+ Q+ +
Sbjct: 423 KHGVSPVSGFLPILVQIPVFFALYKVLF-VTIEMRHAPLCAWIQDLSS-------QDTAN 474
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQ-NNDPNMKSSQALTNF 299
+ LF + PP+ VLP++L V+ + K+ Q Q +DP + F
Sbjct: 475 LLNLFGLLQFDPPVCIG------VLPIILGVTMVLQQKLNQQDQAAHDP-----YGIMKF 523
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKF 336
LP + + S P+GL LYW +N+++ QQ+++++F
Sbjct: 524 LPYVFVFIFSSFPAGLVLYWICSNVITILQQLFVRRF 560
>gi|316932100|ref|YP_004107082.1| membrane protein insertase [Rhodopseudomonas palustris DX-1]
gi|315599814|gb|ADU42349.1| membrane protein insertase, YidC/Oxa1 family [Rhodopseudomonas
palustris DX-1]
Length = 625
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 121/257 (47%), Gaps = 35/257 (13%)
Query: 93 WLSGITNVMETVLKVLKDGMSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESSMAMRS 152
W IT M L H+ +G AI+L+TV++K PL K S M++
Sbjct: 377 WFYFITKPMFLALDFF------FHLVGNFGVAILLVTVLIKLIFLPLANKSYASMAKMKA 430
Query: 153 LAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 212
+ PQ+ A++ER+ D+ + Q E +Y+ INP+AGCLP L IPV+ LY+ L V
Sbjct: 431 IQPQLLALKERHPDDKVKQQQEMMEIYRKEKINPVAGCLPILLQIPVFFSLYKVLF-VTI 489
Query: 213 EGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPF------VDGHPPLGWSDTFAYLVL- 265
E F WI L+ A N + L P+ V GH YLVL
Sbjct: 490 EMRHAPFFGWIHDLSA----ADPTNLFNLFGLIPYDPTAIPVLGH----------YLVLG 535
Query: 266 --PVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWFTNN 323
P+++ + + +K+ N P + Q + ++P++ + P+GL +YW NN
Sbjct: 536 AWPLVMGFTMWFQMKL-----NPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNN 590
Query: 324 LLSTAQQVWLQKFGGAK 340
LLS QQ ++ + G K
Sbjct: 591 LLSVIQQAYIMRRNGVK 607
>gi|319778792|ref|YP_004129705.1| inner membrane protein translocase component YidC, long form
[Taylorella equigenitalis MCE9]
gi|397662552|ref|YP_006503252.1| inner membrane protein [Taylorella equigenitalis ATCC 35865]
gi|317108816|gb|ADU91562.1| Inner membrane protein translocase component YidC, long form
[Taylorella equigenitalis MCE9]
gi|394350731|gb|AFN36645.1| inner membrane protein [Taylorella equigenitalis ATCC 35865]
Length = 549
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 38/211 (18%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+ I++LTVI+K +PL+ +S M++++P++K ++E+Y D++++ +LYK
Sbjct: 357 WGWTIVVLTVIIKLLLYPLSATSYKSMARMKNISPRMKLLKEQYGDDKQKLNAAMMQLYK 416
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRA-LSNVADEGLLTEGFFWIPSLAGPTTIAARQNGS 239
INPL GCLP L IP+++ LYR LS+V G S
Sbjct: 417 TEKINPLGGCLPILLQIPIFLTLYRVILSSVELRG-----------------------AS 453
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
I W+ P Y +LP L++++ ++ +++ N P + +
Sbjct: 454 WIGWITDLSAQDP---------YYILPTLMILTMFLQMRM-----NPTPPDPTQAKIMMI 499
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
+PL+ G P+GL LYW N+LLS QQ
Sbjct: 500 MPLVFGAMMFFFPAGLVLYWTVNSLLSILQQ 530
>gi|220919593|ref|YP_002494897.1| YidC translocase/secretase [Anaeromyxobacter dehalogenans 2CP-1]
gi|254772745|sp|B8JDK5.1|YIDC_ANAD2 RecName: Full=Membrane protein insertase YidC; AltName:
Full=Foldase YidC; AltName: Full=Membrane integrase
YidC; AltName: Full=Membrane protein YidC
gi|219957447|gb|ACL67831.1| YidC translocase/secretase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 546
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 104/215 (48%), Gaps = 36/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G AIILLTV+V+ FPLT K ++S MR L P+++ ++ ++ D+E++ L +LY+
Sbjct: 356 WGVAIILLTVLVRLVLFPLTYKSMQSMNEMRKLQPEIEKLKAKFGDDREKMNLAVMQLYQ 415
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
+NPL GCLP L +PVW LY AL + L E F W+ L
Sbjct: 416 KHKVNPLGGCLPMLLQMPVWFALYAALQTSVE--LYREPFLWMKDLT------------- 460
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
H P Y +LP+ + +S ++ K+ +N ++ + F
Sbjct: 461 ---------AHDP--------YFILPIAMGISSFVMQKLSPQPADN----AQAKMMLYFF 499
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P L VP GL+LY F NNLLS QQ + K
Sbjct: 500 PGFFTVIMLFVPGGLTLYIFVNNLLSIVQQQLMMK 534
>gi|422348886|ref|ZP_16429778.1| membrane protein insertase, YidC/Oxa1 family domain [Sutterella
wadsworthensis 2_1_59BFAA]
gi|404658938|gb|EKB31800.1| membrane protein insertase, YidC/Oxa1 family domain [Sutterella
wadsworthensis 2_1_59BFAA]
Length = 561
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 36/215 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT IVKA +P++ S M+ + P++K +Q+RY D++R+ LY+
Sbjct: 371 WGWAIVLLTCIVKAILYPVSAAGYRSMARMKEVTPRMKQLQDRYKDDKQRLNQAMMELYR 430
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INP+ GCLP + IPV++ LY W+ L G + G
Sbjct: 431 TEKINPVGGCLPIMLQIPVFLALY-----------------WV--LQGSVEL------RG 465
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
W+ D P W VLP ++ V+ ++ + + N P + + +
Sbjct: 466 APWVLWVHDLAMPDPW------FVLPAIMAVTMFLQILL-----NPKPTDPTQARMMYIM 514
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK 335
P++ SGL LYW TNN+LS QQ W+ K
Sbjct: 515 PIVFSVMFFVFASGLVLYWLTNNVLSILQQWWINK 549
>gi|422417425|ref|ZP_16494380.1| stage III sporulation protein J [Listeria seeligeri FSL N1-067]
gi|313635501|gb|EFS01736.1| stage III sporulation protein J [Listeria seeligeri FSL N1-067]
Length = 287
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 128/259 (49%), Gaps = 42/259 (16%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGD----QERIQLET 175
+Y II++T++++ PL KQ++S AM +L P++K +Q +YA ++++Q ET
Sbjct: 64 SYAIGIIVVTILIRLLIMPLMVKQLKSQKAMTNLQPKIKELQTKYASKDNETKQKLQQET 123
Query: 176 ARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAAR 235
RLY+ +NP+ GCLP L +P+ +G Y+A+S A+ + T+ F W+
Sbjct: 124 MRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE--IKTDTFLWM------------ 169
Query: 236 QNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQA 295
LG D Y +LP++ ++ + S KI Q KS
Sbjct: 170 -----------------QLGSPD--PYFILPIVAALTTFASSKISMMGQTQQN--KSMAM 208
Query: 296 LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQK-FGGAKDPMKQFSDIIKDER 354
+ +P+MI + +++PS L+LYW N+ + Q + + F ++ + +++ER
Sbjct: 209 IVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQLEEER 268
Query: 355 LDINKSVPGLSSTKKEARQ 373
L K + ++KK ++
Sbjct: 269 L--KKKAANMKASKKGGKK 285
>gi|109946792|ref|YP_664020.1| inner membrane protein translocase component YidC [Helicobacter
acinonychis str. Sheeba]
gi|109714013|emb|CAJ99021.1| inner-membrane protein [Helicobacter acinonychis str. Sheeba]
Length = 546
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 114/225 (50%), Gaps = 35/225 (15%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AIILLT++V+ +PL+ K + S ++ LAP++K +QE+Y G+ +++Q +LYK
Sbjct: 353 WGWAIILLTIVVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKGEPQKLQANMMQLYK 412
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
G NPL GCLP + IPV+ +YR L N A E +E WI L+
Sbjct: 413 KHGANPLGGCLPLILQIPVFFAIYRVLYN-AVELKSSEWILWIHDLS------------- 458
Query: 241 ISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNFL 300
+D Y +LP+ + S Y + ++ DP + FL
Sbjct: 459 ------IMD-----------PYFILPLFMGASMYWHQSVTPNTM-TDP---MQAKIFKFL 497
Query: 301 PLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGAKDPMKQ 345
PL+ F ++ P+GL LYW TNN+LS QQ+ + K K M +
Sbjct: 498 PLLFTLFLITFPAGLVLYWITNNVLSVLQQLIINKVLENKKHMHE 542
>gi|406932578|gb|EKD67516.1| hypothetical protein ACD_48C00364G0002 [uncultured bacterium]
Length = 250
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 119/228 (52%), Gaps = 31/228 (13%)
Query: 122 GFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKL 181
G I ++T+++K A PLT K +++ ++ + P+++A+++ + GDQ+RI ET +LY
Sbjct: 28 GVIIFIVTILIKLALHPLTTKSIKAQKDLQEIQPKLEALKKEFKGDQQRIAQETMKLYSE 87
Query: 182 AGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGI 241
+NPL CLP L +PV+ LY L GL E F + + +A +N S I
Sbjct: 88 HKVNPLGSCLPMLIQLPVFFALYYVL-----RGLFGEIRFDLLY----SFVARPENISPI 138
Query: 242 SW-LFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQ--------NNDPNMKS 292
S+ +F + +VL VL +Q+I +++QSS+ D +M +
Sbjct: 139 SFGIFDLSERS-----------VVLAVLAAGTQFIQARMMQSSKPPKEAGEGGKDESMTA 187
Query: 293 --SQALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGG 338
++ + FLPLM +S P GL+LYWF + L QQ+W+ K G
Sbjct: 188 MMNKQMLYFLPLMTLLIGMSFPGGLTLYWFLSTLFMVLQQMWILKKHG 235
>gi|381399855|ref|ZP_09924872.1| membrane protein insertase, YidC/Oxa1 family [Microbacterium
laevaniformans OR221]
gi|380772818|gb|EIC06505.1| membrane protein insertase, YidC/Oxa1 family [Microbacterium
laevaniformans OR221]
Length = 375
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 157/331 (47%), Gaps = 55/331 (16%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQ-----ERIQLET 175
+ +I+ L ++V++A PL +Q++S M +AP+++ +QE+Y G + E + ET
Sbjct: 67 WVLSIMGLVIVVRSALIPLFVRQIKSQRKMMEIAPELRKVQEKYRGKKDQLSREAMSRET 126
Query: 176 ARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADE--------GLLTEGFFWIPSLA 227
LYK G P++ CLP L +P+ +G++ LS+V GLL + W A
Sbjct: 127 MALYKKHGTTPVSSCLPLLVQMPILLGMFYTLSDVKKHAEWGFGGVGLLNKDLTWQFYEA 186
Query: 228 GPTTIAARQNGSGISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYIS-VKIIQSSQN 285
+A L ++ P GW T A L VL VL++ SQ+I+ ++II S+N
Sbjct: 187 KLFGVAPLHTS-----LVEAINQKPS-GWEATVAILIVLVVLMIASQFITQLQII--SKN 238
Query: 286 NDPNMKSSQA------LTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQKFGGA 339
P K+ QA + LPL + + P G+ LYWFT+N+ + QQ
Sbjct: 239 LSPEAKTGQAYQMQRIMLYILPLAFIFSGVFFPLGVVLYWFTSNIWTMVQQ--------- 289
Query: 340 KDPMKQFSDIIKDERLDINKSVPGLSSTKKEARQAEKLTTEGPRPGEKFKQIREQEARRR 399
+ +++P S +AR+ E+L +G + K + ++ +
Sbjct: 290 ---------------FLVIRNLPTPGSEAAKARE-ERLARKGKAIDAQGKIVPLEKYQAE 333
Query: 400 QQR-EEEKRKAAEAAAKGNQTINGEQEREAS 429
QQR EE +KA A K Q ++ ++ ++ S
Sbjct: 334 QQRLYEEAQKAKAEAPKRQQPVSKQRAKKQS 364
>gi|303228587|ref|ZP_07315414.1| putative OxaA-like protein [Veillonella atypica ACS-134-V-Col7a]
gi|303230686|ref|ZP_07317436.1| putative OxaA-like protein [Veillonella atypica ACS-049-V-Sch6]
gi|302514741|gb|EFL56733.1| putative OxaA-like protein [Veillonella atypica ACS-049-V-Sch6]
gi|302516766|gb|EFL58681.1| putative OxaA-like protein [Veillonella atypica ACS-134-V-Col7a]
Length = 218
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 98/199 (49%), Gaps = 34/199 (17%)
Query: 138 PLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYKLAGINPLAGCLPTLATI 197
PLT KQ++S AM+ L P++K +QE+Y D +R+Q E +YK G+NPLAGCLP L +
Sbjct: 47 PLTVKQIKSMKAMQELQPRMKELQEKYKNDPQRLQAEMGAMYKEMGVNPLAGCLPLLVQM 106
Query: 198 PVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWS 257
P I ++ AL E F W+PSL G +
Sbjct: 107 PFLIAIFYALQGYPYNPEF-EHFLWLPSL----------------------------GEA 137
Query: 258 DTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTN-FLPLMIGYFALSVPSGLS 316
D Y +LPVL +S ++ + Q+ Q + F+PL IGY +L+ PSGL
Sbjct: 138 D--PYYILPVLSALSTWLMSR--QTGMGASGAAAQQQKIMQIFMPLFIGYISLNFPSGLV 193
Query: 317 LYWFTNNLLSTAQQVWLQK 335
+YW +N+ QQ ++ K
Sbjct: 194 IYWIVSNVFQLVQQHFIYK 212
>gi|330813521|ref|YP_004357760.1| inner membrane protein translocase component YidC, long form
[Candidatus Pelagibacter sp. IMCC9063]
gi|327486616|gb|AEA81021.1| inner membrane protein translocase component YidC, long form
[Candidatus Pelagibacter sp. IMCC9063]
Length = 564
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 106/211 (50%), Gaps = 19/211 (9%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
+G+AI+LLT ++ FPL S M++L P++ +++ Y D+++IQ E LY+
Sbjct: 360 FGWAIVLLTAGIRILFFPLANYSFASMAKMKALQPEIARMKDLYKDDKQKIQTEMMGLYR 419
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSG 240
INP++GCLP L IP + +Y+ L V E F WI L+ P + +
Sbjct: 420 KEKINPVSGCLPMLIQIPFFFAIYKMLF-VTLEMRHAPFFGWIQDLSAP-------DPTS 471
Query: 241 ISWLFPFVDGHPPLGWSDTFAYL-VLPVLLVVSQYISVKIIQSSQNNDPNMKSSQALTNF 299
+ LF + PP +F + V P+L+ VS +I K+ N P + F
Sbjct: 472 LFNLFGLIPWDPP-----SFLMIGVWPILMGVSMWIQQKL-----NPAPTDPIQAKIFAF 521
Query: 300 LPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
PL + S PSGL +YW NN+L+ AQQ
Sbjct: 522 FPLFLTVMLASFPSGLVVYWTVNNVLTMAQQ 552
>gi|308273509|emb|CBX30111.1| hypothetical protein N47_D29200 [uncultured Desulfobacterium sp.]
Length = 551
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 106/214 (49%), Gaps = 28/214 (13%)
Query: 121 YGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGDQERIQLETARLYK 180
YG IILLT+ K +PL K +S M+ + P + ++E+Y D++R+ E LYK
Sbjct: 354 YGVVIILLTIFFKIIFWPLGSKSYKSMNEMKKIQPLLAELKEKYGNDKKRMNEELMGLYK 413
Query: 181 LAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGF-FWIPSLAGPTTIAARQNGS 239
INP+ GCLP +A +PV+ YR L + L F FWI L+ P +
Sbjct: 414 TYKINPMGGCLPMVAQLPVFFAFYRMLYETIE--LRHAPFVFWIKDLSAPDRLF------ 465
Query: 240 GISWLFPFVDGHPPLGWSDTFAYLVLPVLLVV---SQYISVKIIQSSQNNDPNMKSSQAL 296
++ PF++ PP G +PVL +V + +I K+ + DP + +
Sbjct: 466 HFAFTIPFME--PPYG---------IPVLTIVMGATMFIQQKMAPAV--GDP---AQAKM 509
Query: 297 TNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQ 330
FLPL+ ++ +GL LYW NN+LS QQ
Sbjct: 510 MMFLPLVFTVIFINFSAGLVLYWLVNNVLSILQQ 543
>gi|408409785|ref|ZP_11181063.1| Membrane protein oxaA [Lactobacillus sp. 66c]
gi|407876026|emb|CCK82869.1| Membrane protein oxaA [Lactobacillus sp. 66c]
Length = 291
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 111/220 (50%), Gaps = 39/220 (17%)
Query: 120 AYGFAIILLTVIVKAATFPLTKKQVESSMAMRSLAPQVKAIQERYAGD----QERIQLET 175
+YG+AI++ TVI++ PL Q+ S+ M+ + P++KA+QE+Y+G + ++ ET
Sbjct: 71 SYGWAIVIFTVIIRVILLPLNAMQINSTKKMQDVQPELKALQEKYSGSDLETKTKLNEET 130
Query: 176 ARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAAR 235
+LYK AG+NP AGCLP L +PV LY+A+ P L
Sbjct: 131 QKLYKEAGVNPYAGCLPMLIQLPVMWALYQAIWRT-------------PEL--------- 168
Query: 236 QNGSGISWLFPFVD-GHPPLGWSDTFAYLVLPVLLVVSQYISVKIIQSSQNNDPNMKSSQ 294
QNG F ++D G P Y VLP+L ++S I+ S ++
Sbjct: 169 QNGK-----FLWMDLGKPD-------PYYVLPILAAGFTFLSSYIMTLSTPKSSQTTMTK 216
Query: 295 ALTNFLPLMIGYFALSVPSGLSLYWFTNNLLSTAQQVWLQ 334
A++ + +M+G +A+ S +SLYW +NL Q + LQ
Sbjct: 217 AMSYIMAIMVGVWAVIFQSAISLYWVISNLFQVVQTLILQ 256
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.132 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,883,484,798
Number of Sequences: 23463169
Number of extensions: 332274017
Number of successful extensions: 1655299
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3971
Number of HSP's successfully gapped in prelim test: 1966
Number of HSP's that attempted gapping in prelim test: 1633693
Number of HSP's gapped (non-prelim): 16836
length of query: 514
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 367
effective length of database: 8,910,109,524
effective search space: 3270010195308
effective search space used: 3270010195308
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 79 (35.0 bits)