Query 010240
Match_columns 514
No_of_seqs 467 out of 3973
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 22:56:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010240.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010240hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rm5_A Hydroxymethylpyrimidine 100.0 1.7E-41 5.9E-46 360.6 28.9 293 8-301 10-313 (550)
2 3o63_A Probable thiamine-phosp 100.0 1.1E-39 3.8E-44 308.7 25.8 203 301-509 29-242 (243)
3 3h74_A Pyridoxal kinase; PSI-I 100.0 8E-40 2.7E-44 319.8 22.6 246 18-268 1-252 (282)
4 2i5b_A Phosphomethylpyrimidine 100.0 1.7E-37 5.8E-42 302.8 30.1 259 18-282 1-264 (271)
5 3mbh_A Putative phosphomethylp 100.0 7.1E-38 2.4E-42 307.6 24.5 244 20-268 7-262 (291)
6 1ub0_A THID, phosphomethylpyri 100.0 2.7E-36 9.2E-41 292.2 29.9 256 20-281 1-257 (258)
7 3pzs_A PM kinase, pyridoxamine 100.0 1.4E-36 4.9E-41 298.6 25.3 248 19-268 3-263 (289)
8 1jxh_A Phosphomethylpyrimidine 100.0 7.7E-36 2.6E-40 293.5 29.3 263 18-283 23-286 (288)
9 3zs7_A Pyridoxal kinase; trans 100.0 3.8E-36 1.3E-40 296.2 26.5 245 18-268 1-265 (300)
10 3nl6_A Thiamine biosynthetic b 100.0 3.2E-36 1.1E-40 315.9 23.7 204 301-508 9-231 (540)
11 3ceu_A Thiamine phosphate pyro 100.0 2.9E-33 9.9E-38 261.5 16.0 190 302-508 1-193 (210)
12 2ddm_A Pyridoxine kinase; pyri 100.0 6.8E-29 2.3E-33 243.5 27.5 248 16-268 12-270 (283)
13 1yad_A Regulatory protein TENI 100.0 5.8E-29 2E-33 234.7 21.4 200 301-509 16-215 (221)
14 2tps_A Protein (thiamin phosph 100.0 5.1E-28 1.7E-32 229.4 21.7 201 302-509 18-223 (227)
15 1xi3_A Thiamine phosphate pyro 100.0 5E-27 1.7E-31 220.6 24.4 199 302-509 15-213 (215)
16 3bgk_A SMU.573, putative uncha 100.0 2.8E-29 9.4E-34 246.9 8.7 228 3-263 41-284 (311)
17 2r3b_A YJEF-related protein; p 100.0 1.1E-28 3.9E-33 242.4 10.7 226 3-263 27-267 (310)
18 2yxt_A Pyridoxal kinase; beta 99.9 1.1E-24 3.8E-29 216.4 28.1 262 20-286 4-293 (312)
19 2yw3_A 4-hydroxy-2-oxoglutarat 99.9 1.6E-25 5.6E-30 207.5 12.1 184 302-506 13-201 (207)
20 3rpz_A ADP/ATP-dependent NAD(P 99.9 2.4E-25 8.3E-30 214.8 9.4 226 3-257 13-245 (279)
21 1wbh_A KHG/KDPG aldolase; lyas 99.9 1.7E-24 5.9E-29 201.2 11.5 172 302-493 16-191 (214)
22 3rss_A Putative uncharacterize 99.9 1.6E-24 5.5E-29 225.6 10.7 234 3-265 227-477 (502)
23 1mxs_A KDPG aldolase; 2-keto-3 99.9 3.9E-24 1.3E-28 200.0 11.0 183 302-504 26-217 (225)
24 1vhc_A Putative KHG/KDPG aldol 99.9 4.3E-23 1.5E-27 192.8 14.2 173 318-506 29-210 (224)
25 2v82_A 2-dehydro-3-deoxy-6-pho 99.9 1.9E-21 6.6E-26 181.9 15.4 174 318-511 19-205 (212)
26 1tqj_A Ribulose-phosphate 3-ep 99.9 2.1E-22 7.3E-27 190.0 6.9 188 318-508 17-223 (230)
27 1h1y_A D-ribulose-5-phosphate 99.9 2.6E-21 8.9E-26 182.8 12.3 192 318-512 19-227 (228)
28 1rkd_A Ribokinase; carbohydrat 99.8 3.6E-19 1.2E-23 176.3 20.8 155 89-264 134-288 (309)
29 3k5w_A Carbohydrate kinase; 11 99.8 1.6E-20 5.5E-25 193.8 10.8 211 7-257 222-441 (475)
30 4e38_A Keto-hydroxyglutarate-a 99.8 6E-20 2.1E-24 170.8 13.1 170 303-491 35-207 (232)
31 2fv7_A Ribokinase; structural 99.8 3.5E-19 1.2E-23 178.2 19.6 156 89-264 154-313 (331)
32 3ry7_A Ribokinase; transferase 99.8 6.7E-19 2.3E-23 174.0 19.0 155 89-264 133-288 (304)
33 3kzh_A Probable sugar kinase; 99.8 2.1E-18 7E-23 172.4 21.6 155 89-264 136-290 (328)
34 4e69_A 2-dehydro-3-deoxyglucon 99.8 1.8E-18 6.1E-23 172.8 16.5 160 89-264 145-312 (328)
35 2abq_A Fructose 1-phosphate ki 99.8 1.5E-17 5.2E-22 164.4 21.8 154 89-265 125-283 (306)
36 3lhx_A Ketodeoxygluconokinase; 99.8 2.2E-18 7.4E-23 171.6 15.5 160 89-264 129-299 (319)
37 2jg5_A Fructose 1-phosphate ki 99.8 1.5E-17 5.1E-22 164.4 20.7 153 89-264 125-282 (306)
38 2qhp_A Fructokinase; NP_810670 99.8 1.4E-18 4.6E-23 171.1 13.1 160 89-264 114-280 (296)
39 4e84_A D-beta-D-heptose 7-phos 99.8 1.3E-17 4.5E-22 168.0 20.4 151 89-264 186-339 (352)
40 4du5_A PFKB; structural genomi 99.8 3.2E-18 1.1E-22 171.6 15.4 160 89-264 152-318 (336)
41 2nwh_A AGR_C_3442P, carbohydra 99.8 3.8E-18 1.3E-22 169.7 15.4 154 89-264 134-288 (317)
42 2afb_A 2-keto-3-deoxygluconate 99.8 6E-18 2E-22 170.7 16.7 170 89-264 138-325 (351)
43 2jg1_A Tagatose-6-phosphate ki 99.8 2.6E-17 8.7E-22 164.6 19.7 153 89-264 147-307 (330)
44 2f02_A Tagatose-6-phosphate ki 99.8 1.8E-17 6.1E-22 165.2 18.4 156 89-264 129-290 (323)
45 2qcv_A Putative 5-dehydro-2-de 99.8 8.5E-18 2.9E-22 168.2 15.2 163 89-264 138-306 (332)
46 3cqd_A 6-phosphofructokinase i 99.7 4.8E-17 1.7E-21 161.0 20.4 169 73-264 114-289 (309)
47 3iq0_A Putative ribokinase II; 99.7 5.4E-18 1.9E-22 169.5 13.0 159 89-264 130-293 (330)
48 1rpx_A Protein (ribulose-phosp 99.7 2.3E-18 7.8E-23 163.1 9.7 184 318-506 23-227 (230)
49 1vm7_A Ribokinase; TM0960, str 99.7 4.5E-18 1.5E-22 168.6 12.1 152 89-264 140-291 (311)
50 3umo_A 6-phosphofructokinase i 99.7 6.8E-17 2.3E-21 160.0 20.5 153 89-264 130-289 (309)
51 3ie7_A LIN2199 protein; phosph 99.7 4.1E-17 1.4E-21 162.4 18.9 166 72-264 115-286 (320)
52 3ktn_A Carbohydrate kinase, PF 99.7 1.8E-17 6.3E-22 166.8 16.2 171 89-264 129-313 (346)
53 3pl2_A Sugar kinase, ribokinas 99.7 2.4E-17 8.2E-22 164.0 16.2 158 90-264 136-298 (319)
54 3dzv_A 4-methyl-5-(beta-hydrox 99.7 1.5E-17 5.2E-22 159.3 12.1 169 84-268 55-240 (273)
55 3ljs_A Fructokinase; fructokia 99.7 3.9E-18 1.3E-22 171.2 8.1 162 89-264 129-309 (338)
56 2rbc_A Sugar kinase, AGR_C_456 99.7 3.9E-17 1.3E-21 164.1 15.2 150 89-264 157-309 (343)
57 3vas_A Putative adenosine kina 99.7 2.9E-17 1E-21 166.7 13.7 224 20-264 100-353 (370)
58 3kd6_A Carbohydrate kinase, PF 99.7 1.9E-17 6.7E-22 164.2 11.0 153 89-264 119-277 (313)
59 3h49_A Ribokinase; transferase 99.7 1.5E-16 5.1E-21 158.7 17.5 155 89-264 135-295 (325)
60 1v1a_A 2-keto-3-deoxygluconate 99.7 1.6E-16 5.4E-21 157.3 17.5 154 89-264 125-284 (309)
61 1tyy_A Putative sugar kinase; 99.7 9E-18 3.1E-22 168.5 8.1 160 89-264 141-310 (339)
62 2fli_A Ribulose-phosphate 3-ep 99.7 3.7E-17 1.3E-21 153.7 10.6 183 318-506 16-218 (220)
63 2ajr_A Sugar kinase, PFKB fami 99.7 1.1E-16 3.9E-21 159.9 14.3 155 89-264 146-307 (331)
64 1ekq_A Hydroxyethylthiazole ki 99.7 1.5E-16 5.1E-21 154.1 14.5 159 90-266 61-233 (272)
65 2v78_A Fructokinase; transfera 99.7 1.6E-16 5.6E-21 157.5 14.8 158 89-264 128-291 (313)
66 3hj6_A Fructokinase, FRK; fruc 99.7 4.6E-18 1.6E-22 169.8 2.9 159 89-264 144-308 (327)
67 3otx_A Adenosine kinase, putat 99.7 1E-16 3.4E-21 161.4 12.7 162 89-265 162-335 (347)
68 1bx4_A Protein (adenosine kina 99.7 6E-17 2E-21 162.9 10.3 161 89-264 161-333 (345)
69 3loo_A Anopheles gambiae adeno 99.7 6.6E-17 2.3E-21 163.9 10.1 162 89-265 176-351 (365)
70 2dcn_A Hypothetical fructokina 99.7 1.3E-16 4.4E-21 158.1 11.9 157 89-264 128-289 (311)
71 1v8a_A Hydroxyethylthiazole ki 99.7 8.5E-17 2.9E-21 154.9 9.3 162 89-268 58-231 (265)
72 2c4e_A Sugar kinase MJ0406; tr 99.7 2.2E-16 7.7E-21 155.7 12.3 150 89-264 130-280 (302)
73 3ikh_A Carbohydrate kinase; tr 99.7 3E-16 1E-20 154.5 13.2 137 89-264 131-269 (299)
74 3lab_A Putative KDPG (2-keto-3 99.7 2.3E-16 7.9E-21 144.2 11.3 166 302-491 13-192 (217)
75 2abs_A Adenosine kinase, AK; r 99.7 3.7E-16 1.3E-20 159.4 14.2 162 89-264 180-371 (383)
76 3cu2_A Ribulose-5-phosphate 3- 99.7 5.3E-17 1.8E-21 152.5 6.9 181 318-506 26-236 (237)
77 4e3a_A Sugar kinase protein; s 99.7 2.9E-16 9.8E-21 158.3 12.5 155 89-264 171-333 (352)
78 1vk4_A PFKB carbohydrate kinas 99.6 2E-16 6.9E-21 155.7 9.5 160 88-264 118-280 (298)
79 2pkf_A Adenosine kinase; trans 99.6 1.7E-15 5.7E-20 151.6 15.1 151 89-264 148-300 (334)
80 3go6_A Ribokinase RBSK; phosph 99.6 5.2E-16 1.8E-20 153.6 10.9 139 89-264 143-285 (310)
81 3b1n_A Ribokinase, putative; r 99.6 2E-15 6.8E-20 150.5 14.7 152 88-264 134-286 (326)
82 3qja_A IGPS, indole-3-glycerol 99.6 7.1E-15 2.4E-19 141.1 17.0 178 319-507 73-263 (272)
83 2zbt_A Pyridoxal biosynthesis 99.6 8.3E-16 2.8E-20 151.1 8.8 185 321-509 31-261 (297)
84 1tqx_A D-ribulose-5-phosphate 99.6 1.3E-15 4.6E-20 142.1 9.4 197 307-509 8-224 (227)
85 2qjg_A Putative aldolase MJ040 99.6 3.9E-15 1.3E-19 144.5 12.1 148 322-509 103-260 (273)
86 1y0e_A Putative N-acetylmannos 99.6 1E-14 3.4E-19 137.3 14.5 171 318-506 23-221 (223)
87 3ajx_A 3-hexulose-6-phosphate 99.6 5.5E-15 1.9E-19 137.4 12.3 188 303-505 2-205 (207)
88 4gm6_A PFKB family carbohydrat 99.6 1.1E-14 3.8E-19 146.6 15.6 165 89-263 150-325 (351)
89 3inp_A D-ribulose-phosphate 3- 99.6 1.9E-15 6.7E-20 142.2 9.2 200 305-508 28-245 (246)
90 3uq6_A Adenosine kinase, putat 99.6 5.4E-15 1.8E-19 150.1 12.9 160 90-264 181-355 (372)
91 1vc4_A Indole-3-glycerol phosp 99.6 4.5E-16 1.5E-20 148.3 3.7 168 319-503 66-253 (254)
92 1w8s_A FBP aldolase, fructose- 99.6 1.6E-14 5.6E-19 138.5 13.9 147 323-509 97-254 (263)
93 1wa3_A 2-keto-3-deoxy-6-phosph 99.6 7.5E-15 2.6E-19 136.3 10.9 173 318-509 22-203 (205)
94 1ka9_F Imidazole glycerol phos 99.6 1.9E-14 6.5E-19 138.0 13.8 179 318-502 31-242 (252)
95 3ovp_A Ribulose-phosphate 3-ep 99.6 1.9E-14 6.4E-19 134.9 13.3 201 306-510 6-221 (228)
96 3ctl_A D-allulose-6-phosphate 99.6 5.1E-15 1.8E-19 138.8 9.4 187 318-508 13-219 (231)
97 3ewm_A Uncharacterized sugar k 99.6 3E-14 1E-18 141.1 15.2 149 90-264 125-282 (313)
98 2hlz_A Ketohexokinase; non-pro 99.6 1.3E-14 4.5E-19 143.7 11.9 149 89-264 146-305 (312)
99 1thf_D HISF protein; thermophI 99.6 6.9E-14 2.4E-18 134.2 16.5 180 318-503 30-242 (253)
100 3nl6_A Thiamine biosynthetic b 99.5 6.8E-14 2.3E-18 146.8 16.8 163 89-267 308-505 (540)
101 2nv1_A Pyridoxal biosynthesis 99.5 3.5E-15 1.2E-19 147.0 6.1 185 321-509 31-261 (305)
102 1yxy_A Putative N-acetylmannos 99.5 1.2E-13 4.1E-18 130.9 14.7 167 319-506 37-232 (234)
103 3igs_A N-acetylmannosamine-6-p 99.5 6.1E-13 2.1E-17 125.0 18.9 172 318-509 36-230 (232)
104 3bw2_A 2-nitropropane dioxygen 99.5 5.9E-14 2E-18 142.0 11.8 162 331-495 66-246 (369)
105 3q58_A N-acetylmannosamine-6-p 99.5 7.1E-13 2.4E-17 124.2 17.8 170 318-507 36-228 (229)
106 1vzw_A Phosphoribosyl isomeras 99.5 5E-14 1.7E-18 134.4 8.3 170 319-495 33-231 (244)
107 1rd5_A Tryptophan synthase alp 99.5 7.9E-13 2.7E-17 127.3 16.5 182 301-492 19-236 (262)
108 1h5y_A HISF; histidine biosynt 99.5 4.6E-13 1.6E-17 128.2 14.6 173 318-496 33-237 (253)
109 3tsm_A IGPS, indole-3-glycerol 99.5 2.6E-12 9.1E-17 122.5 19.6 172 319-505 80-268 (272)
110 3bf5_A Ribokinase related prot 99.5 6E-14 2E-18 138.5 7.6 140 89-264 140-279 (306)
111 1qo2_A Molecule: N-((5-phospho 99.5 3.6E-14 1.2E-18 135.1 5.4 176 318-501 30-238 (241)
112 3hpd_A Hydroxyethylthiazole ki 99.4 3.7E-13 1.3E-17 127.8 12.0 161 90-268 59-231 (265)
113 3f4w_A Putative hexulose 6 pho 99.4 1.4E-12 4.7E-17 121.5 15.0 193 302-508 1-209 (211)
114 1to3_A Putative aldolase YIHT; 99.4 7.1E-13 2.4E-17 129.4 13.1 149 324-509 114-289 (304)
115 2y88_A Phosphoribosyl isomeras 99.4 2.1E-13 7.1E-18 130.1 7.5 169 320-495 33-234 (244)
116 2w6r_A Imidazole glycerol phos 99.4 1.5E-12 5E-17 125.8 12.8 176 319-500 31-243 (266)
117 3tdn_A FLR symmetric alpha-bet 99.4 1.8E-13 6.3E-18 130.7 3.1 178 318-501 35-244 (247)
118 1geq_A Tryptophan synthase alp 99.3 3.2E-12 1.1E-16 122.1 10.9 183 319-509 20-244 (248)
119 2gjl_A Hypothetical protein PA 99.3 2.2E-11 7.4E-16 121.2 14.7 167 321-494 29-209 (328)
120 4adt_A Pyridoxine biosynthetic 99.3 2.4E-11 8.1E-16 117.4 13.8 184 322-509 32-261 (297)
121 3jr2_A Hexulose-6-phosphate sy 99.3 3.1E-12 1.1E-16 119.6 6.2 195 302-510 7-217 (218)
122 3glc_A Aldolase LSRF; TIM barr 99.3 1E-10 3.5E-15 112.9 16.8 144 322-509 129-280 (295)
123 1xm3_A Thiazole biosynthesis p 99.3 5.1E-11 1.7E-15 114.4 14.5 180 320-510 25-231 (264)
124 2z6i_A Trans-2-enoyl-ACP reduc 99.2 2.7E-11 9.3E-16 120.5 11.1 166 321-494 26-199 (332)
125 3bo9_A Putative nitroalkan dio 99.2 4.2E-11 1.4E-15 118.7 12.4 165 321-494 40-213 (326)
126 1x1o_A Nicotinate-nucleotide p 99.2 6.7E-12 2.3E-16 120.6 6.2 139 329-492 130-274 (286)
127 2yzr_A Pyridoxal biosynthesis 99.2 7.7E-13 2.6E-17 127.2 -1.0 101 406-509 173-294 (330)
128 4fo4_A Inosine 5'-monophosphat 99.1 3.9E-10 1.3E-14 112.5 12.4 163 322-493 61-247 (366)
129 3khj_A Inosine-5-monophosphate 99.0 1.4E-09 4.8E-14 108.7 11.3 163 322-493 60-243 (361)
130 3o07_A Pyridoxine biosynthesis 99.0 2.5E-09 8.4E-14 99.8 11.6 150 354-509 60-252 (291)
131 3exr_A RMPD (hexulose-6-phosph 98.9 4.3E-09 1.5E-13 98.0 11.8 194 302-510 6-220 (221)
132 2h6r_A Triosephosphate isomera 98.9 2E-09 7E-14 100.2 8.9 132 371-505 75-218 (219)
133 1i4n_A Indole-3-glycerol phosp 98.8 2.1E-07 7.2E-12 87.6 17.8 170 319-505 62-249 (251)
134 1qop_A Tryptophan synthase alp 98.8 1.4E-07 4.8E-12 90.6 16.4 172 318-492 31-240 (268)
135 1q6o_A Humps, 3-keto-L-gulonat 98.8 6.8E-08 2.3E-12 89.8 13.1 189 303-509 5-214 (216)
136 1wv2_A Thiazole moeity, thiazo 98.8 9E-07 3.1E-11 82.1 19.9 180 324-510 36-240 (265)
137 2ekc_A AQ_1548, tryptophan syn 98.7 1.6E-07 5.3E-12 89.9 15.4 194 306-508 22-258 (262)
138 3nav_A Tryptophan synthase alp 98.7 7.2E-07 2.5E-11 85.1 18.7 188 318-508 34-264 (271)
139 3ffs_A Inosine-5-monophosphate 98.7 1.5E-07 5E-12 94.7 13.7 128 321-492 146-281 (400)
140 3vnd_A TSA, tryptophan synthas 98.7 1E-06 3.5E-11 83.9 17.7 188 318-508 32-262 (267)
141 1o4u_A Type II quinolic acid p 98.6 3.7E-08 1.3E-12 94.3 7.6 88 391-493 183-275 (285)
142 3iwp_A Copper homeostasis prot 98.6 2.5E-08 8.5E-13 94.4 5.1 151 322-486 50-238 (287)
143 2b7n_A Probable nicotinate-nuc 98.6 5.6E-08 1.9E-12 93.2 7.6 87 391-492 172-263 (273)
144 1ujp_A Tryptophan synthase alp 98.6 1.2E-06 4E-11 83.9 15.4 192 304-508 19-251 (271)
145 4avf_A Inosine-5'-monophosphat 98.6 3.6E-07 1.2E-11 95.3 12.5 130 319-492 229-367 (490)
146 1pii_A N-(5'phosphoribosyl)ant 98.5 2.1E-06 7.2E-11 87.5 16.3 169 319-504 69-254 (452)
147 2jbm_A Nicotinate-nucleotide p 98.5 1.3E-07 4.6E-12 91.6 6.9 87 391-492 187-278 (299)
148 1nsj_A PRAI, phosphoribosyl an 98.4 3.3E-06 1.1E-10 77.2 13.4 176 322-505 13-201 (205)
149 3c2e_A Nicotinate-nucleotide p 98.4 1.8E-07 6.3E-12 90.4 5.0 87 391-492 189-283 (294)
150 1jcn_A Inosine monophosphate d 98.4 1.9E-06 6.6E-11 90.7 13.2 119 371-493 260-394 (514)
151 3fok_A Uncharacterized protein 98.4 2.5E-06 8.4E-11 81.3 12.2 149 323-512 133-301 (307)
152 1eep_A Inosine 5'-monophosphat 98.4 1.3E-06 4.5E-11 89.0 11.2 129 319-492 153-291 (404)
153 1v5x_A PRA isomerase, phosphor 98.4 5.1E-06 1.7E-10 75.8 13.9 176 322-508 12-198 (203)
154 3r2g_A Inosine 5'-monophosphat 98.4 2.2E-06 7.4E-11 85.0 11.9 129 319-493 100-235 (361)
155 1jvn_A Glutamine, bifunctional 98.3 3E-06 1E-10 89.7 13.1 177 319-501 281-541 (555)
156 1qap_A Quinolinic acid phospho 98.3 8.3E-07 2.8E-11 85.7 8.0 84 392-491 200-285 (296)
157 3tha_A Tryptophan synthase alp 98.3 3.7E-06 1.3E-10 78.9 11.7 184 318-505 28-249 (252)
158 4a29_A Engineered retro-aldol 98.3 2.1E-05 7.2E-10 73.1 16.3 158 325-497 70-244 (258)
159 2htm_A Thiazole biosynthesis p 98.3 2.8E-06 9.6E-11 79.1 10.2 104 400-510 123-231 (268)
160 2czd_A Orotidine 5'-phosphate 98.3 1.9E-06 6.4E-11 79.5 8.8 122 370-508 70-207 (208)
161 4fxs_A Inosine-5'-monophosphat 98.3 4.8E-06 1.7E-10 86.8 12.4 131 319-493 231-370 (496)
162 2gou_A Oxidoreductase, FMN-bin 98.2 8.8E-06 3E-10 81.5 13.1 79 414-499 256-335 (365)
163 1vyr_A Pentaerythritol tetrani 98.2 9.2E-06 3.2E-10 81.3 12.4 78 414-499 257-336 (364)
164 3cwo_X Beta/alpha-barrel prote 98.2 1.8E-05 6.2E-10 73.8 13.3 184 303-502 4-220 (237)
165 3hgj_A Chromate reductase; TIM 98.2 3E-05 1E-09 77.2 15.1 83 414-499 245-331 (349)
166 1qpo_A Quinolinate acid phosph 98.1 8E-06 2.7E-10 78.2 9.7 88 392-492 186-275 (284)
167 3tqv_A Nicotinate-nucleotide p 98.0 1.2E-05 4.1E-10 76.5 9.0 82 393-490 191-274 (287)
168 1ep3_A Dihydroorotate dehydrog 98.0 1.6E-05 5.4E-10 78.0 9.7 49 444-495 230-279 (311)
169 3usb_A Inosine-5'-monophosphat 98.0 1.4E-05 4.7E-10 83.7 9.6 118 372-492 262-394 (511)
170 1viz_A PCRB protein homolog; s 98.0 2.6E-05 9E-10 72.8 9.7 165 319-501 21-223 (240)
171 1vrd_A Inosine-5'-monophosphat 97.9 5.3E-05 1.8E-09 79.3 11.9 129 319-491 237-374 (494)
172 3l5l_A Xenobiotic reductase A; 97.9 0.0001 3.4E-09 73.8 13.3 84 414-500 252-339 (363)
173 2agk_A 1-(5-phosphoribosyl)-5- 97.9 0.00012 4E-09 69.6 12.8 158 318-489 38-239 (260)
174 1ps9_A 2,4-dienoyl-COA reducta 97.9 0.00029 1E-08 76.6 17.7 103 394-499 201-323 (671)
175 1w0m_A TIM, triosephosphate is 97.8 0.00011 3.8E-09 67.8 11.6 136 371-509 78-225 (226)
176 1gox_A (S)-2-hydroxy-acid oxid 97.8 4.9E-05 1.7E-09 76.3 9.8 161 319-491 137-314 (370)
177 2r14_A Morphinone reductase; H 97.8 4.9E-05 1.7E-09 76.3 9.5 79 414-499 261-341 (377)
178 2f6u_A GGGPS, (S)-3-O-geranylg 97.8 5.4E-06 1.8E-10 77.0 2.3 157 319-491 21-223 (234)
179 3gnn_A Nicotinate-nucleotide p 97.8 4.6E-05 1.6E-09 72.9 8.5 84 393-492 202-287 (298)
180 1p4c_A L(+)-mandelate dehydrog 97.8 4.9E-05 1.7E-09 76.5 8.8 93 393-491 219-312 (380)
181 3ru6_A Orotidine 5'-phosphate 97.8 0.00087 3E-08 64.4 16.5 182 299-508 22-252 (303)
182 3paj_A Nicotinate-nucleotide p 97.7 6.2E-05 2.1E-09 72.7 8.1 82 393-490 224-307 (320)
183 1hg3_A Triosephosphate isomera 97.7 0.00013 4.5E-09 67.3 10.0 132 371-505 81-224 (225)
184 1ypf_A GMP reductase; GUAC, pu 97.7 6.5E-05 2.2E-09 74.4 7.9 82 407-491 156-244 (336)
185 3l0g_A Nicotinate-nucleotide p 97.7 0.00014 4.8E-09 69.3 9.7 83 393-491 200-284 (300)
186 2c6q_A GMP reductase 2; TIM ba 97.7 0.00052 1.8E-08 68.1 14.2 82 406-491 167-257 (351)
187 3vk5_A MOEO5; TIM barrel, tran 97.6 0.00071 2.4E-08 63.8 13.7 172 303-492 41-262 (286)
188 2qr6_A IMP dehydrogenase/GMP r 97.6 0.00025 8.4E-09 71.9 11.1 96 391-491 203-311 (393)
189 3sgz_A Hydroxyacid oxidase 2; 97.6 0.00021 7.1E-09 70.5 10.1 112 392-509 210-330 (352)
190 1vqt_A Orotidine 5'-phosphate 97.6 4.7E-05 1.6E-09 70.1 5.1 113 371-506 78-212 (213)
191 3vzx_A Heptaprenylglyceryl pho 97.6 9E-05 3.1E-09 68.3 6.9 166 322-506 22-225 (228)
192 1eix_A Orotidine 5'-monophosph 97.6 0.00015 5.1E-09 68.4 8.5 59 447-508 173-243 (245)
193 3b0p_A TRNA-dihydrouridine syn 97.6 0.00016 5.3E-09 72.0 8.8 77 411-491 147-230 (350)
194 2nli_A Lactate oxidase; flavoe 97.5 0.00026 8.9E-09 70.8 9.9 94 392-491 222-318 (368)
195 1vcf_A Isopentenyl-diphosphate 97.5 0.00043 1.5E-08 68.4 11.3 79 409-490 193-289 (332)
196 1jub_A Dihydroorotate dehydrog 97.5 0.00054 1.9E-08 67.0 11.6 77 414-493 178-279 (311)
197 4gj1_A 1-(5-phosphoribosyl)-5- 97.5 0.0023 7.7E-08 60.1 15.4 173 320-499 33-238 (243)
198 1wa3_A 2-keto-3-deoxy-6-phosph 97.5 0.00025 8.5E-09 64.9 8.5 76 393-485 54-130 (205)
199 1z41_A YQJM, probable NADH-dep 97.5 0.00025 8.6E-09 70.2 8.7 83 414-499 235-320 (338)
200 3ve9_A Orotidine-5'-phosphate 97.5 0.00031 1.1E-08 64.5 8.6 169 319-511 12-205 (215)
201 2nzl_A Hydroxyacid oxidase 1; 97.4 0.00038 1.3E-08 70.1 9.2 92 394-491 247-341 (392)
202 4af0_A Inosine-5'-monophosphat 97.4 0.0015 5E-08 67.1 13.1 95 392-492 314-419 (556)
203 4dbe_A Orotidine 5'-phosphate 97.4 0.00046 1.6E-08 63.7 8.7 86 412-512 126-213 (222)
204 3w01_A Heptaprenylglyceryl pho 97.4 0.0024 8.1E-08 58.9 13.1 154 321-491 26-219 (235)
205 3gr7_A NADPH dehydrogenase; fl 97.4 0.00069 2.4E-08 67.0 10.1 83 414-499 235-320 (340)
206 2e6f_A Dihydroorotate dehydrog 97.3 0.00078 2.7E-08 66.0 10.0 98 395-495 156-283 (314)
207 1p0k_A Isopentenyl-diphosphate 97.3 0.0003 1E-08 70.0 7.0 81 409-492 190-286 (349)
208 1kbi_A Cytochrome B2, L-LCR; f 97.3 0.00062 2.1E-08 71.0 9.4 93 393-491 337-437 (511)
209 2p10_A MLL9387 protein; putati 97.3 0.00027 9.1E-09 66.5 5.7 176 326-508 43-280 (286)
210 3kru_A NADH:flavin oxidoreduct 97.2 0.0038 1.3E-07 61.6 13.5 83 414-500 236-321 (343)
211 3oa3_A Aldolase; structural ge 97.2 0.0044 1.5E-07 58.8 12.9 151 300-489 108-266 (288)
212 1f76_A Dihydroorotate dehydrog 97.2 0.0012 4.1E-08 65.3 9.6 45 444-491 276-323 (336)
213 1twd_A Copper homeostasis prot 97.2 0.02 6.9E-07 53.2 16.9 147 322-486 12-198 (256)
214 1me8_A Inosine-5'-monophosphat 97.2 0.0028 9.5E-08 66.2 12.6 84 404-491 288-386 (503)
215 2uva_G Fatty acid synthase bet 97.2 0.00064 2.2E-08 81.4 8.6 170 320-493 596-802 (2060)
216 3tdn_A FLR symmetric alpha-bet 97.1 0.00069 2.4E-08 63.9 6.9 78 411-494 38-116 (247)
217 3m47_A Orotidine 5'-phosphate 97.1 0.0076 2.6E-07 55.8 13.8 80 414-509 143-225 (228)
218 1zfj_A Inosine monophosphate d 97.1 0.0023 7.9E-08 66.7 11.3 119 371-492 238-371 (491)
219 1ub3_A Aldolase protein; schif 97.1 0.0044 1.5E-07 56.9 11.7 149 300-488 53-207 (220)
220 1icp_A OPR1, 12-oxophytodienoa 97.1 0.0013 4.4E-08 66.0 8.5 81 414-499 262-343 (376)
221 2yyu_A Orotidine 5'-phosphate 97.0 0.00052 1.8E-08 64.7 5.1 62 447-511 167-240 (246)
222 1vhn_A Putative flavin oxidore 96.9 0.0013 4.5E-08 64.4 7.0 78 412-496 144-223 (318)
223 3sr7_A Isopentenyl-diphosphate 96.9 0.0023 7.8E-08 63.6 8.3 80 409-491 218-312 (365)
224 3iv3_A Tagatose 1,6-diphosphat 96.9 0.0038 1.3E-07 60.7 9.6 143 324-492 116-286 (332)
225 1dbt_A Orotidine 5'-phosphate 96.9 0.00099 3.4E-08 62.4 5.3 61 445-508 164-236 (239)
226 2bdq_A Copper homeostasis prot 96.8 0.0087 3E-07 54.5 10.8 161 326-497 16-218 (224)
227 1gte_A Dihydropyrimidine dehyd 96.8 0.0039 1.3E-07 71.0 10.3 61 444-507 775-839 (1025)
228 3ngj_A Deoxyribose-phosphate a 96.8 0.0077 2.7E-07 55.7 10.4 145 300-488 77-231 (239)
229 3tfx_A Orotidine 5'-phosphate 96.7 0.005 1.7E-07 58.0 8.6 80 414-510 150-240 (259)
230 2uv8_G Fatty acid synthase sub 96.7 0.0021 7.1E-08 76.7 7.3 168 321-493 604-809 (2051)
231 3vkj_A Isopentenyl-diphosphate 96.6 0.0053 1.8E-07 61.1 9.0 79 409-490 199-300 (368)
232 3gka_A N-ethylmaleimide reduct 96.6 0.0023 7.8E-08 63.6 5.8 73 414-499 256-329 (361)
233 3zen_D Fatty acid synthase; tr 96.6 0.005 1.7E-07 76.3 9.8 166 321-493 442-653 (3089)
234 3zwt_A Dihydroorotate dehydrog 96.5 0.01 3.6E-07 59.0 10.3 74 414-490 240-331 (367)
235 1o94_A Tmadh, trimethylamine d 96.5 0.027 9.1E-07 61.7 14.5 84 413-499 242-334 (729)
236 3aty_A Tcoye, prostaglandin F2 96.5 0.0045 1.5E-07 62.0 7.3 76 414-499 272-349 (379)
237 3k30_A Histamine dehydrogenase 96.4 0.013 4.5E-07 63.7 11.5 83 414-499 249-337 (690)
238 4ab4_A Xenobiotic reductase B; 96.4 0.0031 1E-07 62.7 5.4 73 414-499 248-321 (362)
239 3r12_A Deoxyribose-phosphate a 96.4 0.026 8.7E-07 52.8 11.2 124 323-488 116-247 (260)
240 1tv5_A Dhodehase, dihydroorota 96.3 0.0062 2.1E-07 62.0 7.4 74 414-490 317-406 (443)
241 3n9r_A Fructose-bisphosphate a 96.2 0.13 4.3E-06 49.4 15.6 164 322-508 88-292 (307)
242 4aaj_A N-(5'-phosphoribosyl)an 96.2 0.019 6.4E-07 53.0 9.1 151 327-491 36-207 (228)
243 4ef8_A Dihydroorotate dehydrog 96.1 0.03 1E-06 55.2 10.9 48 442-492 263-312 (354)
244 1mzh_A Deoxyribose-phosphate a 96.1 0.0097 3.3E-07 55.0 6.7 66 414-488 138-206 (225)
245 3kts_A Glycerol uptake operon 96.1 0.034 1.2E-06 49.5 9.9 64 414-491 120-185 (192)
246 1zco_A 2-dehydro-3-deoxyphosph 96.0 0.32 1.1E-05 45.8 17.2 179 304-490 24-231 (262)
247 3l5a_A NADH/flavin oxidoreduct 96.0 0.0057 1.9E-07 62.0 5.4 82 414-499 270-359 (419)
248 1ka9_F Imidazole glycerol phos 96.0 0.0044 1.5E-07 58.3 4.4 78 410-493 32-111 (252)
249 1gvf_A Tagatose-bisphosphate a 96.0 0.18 6.2E-06 47.9 15.4 144 321-490 87-236 (286)
250 3ndo_A Deoxyribose-phosphate a 96.0 0.023 7.7E-07 52.4 8.7 148 300-488 62-221 (231)
251 2isw_A Putative fructose-1,6-b 96.0 0.11 3.9E-06 50.0 13.8 141 322-489 89-258 (323)
252 3i65_A Dihydroorotate dehydrog 95.9 0.0038 1.3E-07 62.8 3.4 75 414-491 289-379 (415)
253 1thf_D HISF protein; thermophI 95.9 0.0075 2.6E-07 56.8 5.2 78 410-493 31-110 (253)
254 1rvg_A Fructose-1,6-bisphospha 95.8 0.28 9.4E-06 47.0 15.7 145 321-489 85-256 (305)
255 2cu0_A Inosine-5'-monophosphat 95.8 0.092 3.2E-06 54.4 13.3 45 445-492 318-363 (486)
256 1n7k_A Deoxyribose-phosphate a 95.8 0.051 1.8E-06 50.2 10.1 128 320-488 90-223 (234)
257 2hsa_B 12-oxophytodienoate red 95.7 0.01 3.5E-07 59.9 5.8 83 414-499 266-361 (402)
258 4fo4_A Inosine 5'-monophosphat 95.6 0.14 4.8E-06 50.7 13.1 112 319-433 108-245 (366)
259 2w6r_A Imidazole glycerol phos 95.5 0.025 8.6E-07 53.6 7.3 74 411-490 33-107 (266)
260 3nvt_A 3-deoxy-D-arabino-heptu 95.5 0.3 1E-05 48.6 15.2 175 303-490 143-350 (385)
261 3ih1_A Methylisocitrate lyase; 95.4 1.2 4.1E-05 42.6 18.6 145 328-490 46-247 (305)
262 3q94_A Fructose-bisphosphate a 95.4 0.45 1.5E-05 45.2 15.4 142 321-490 93-240 (288)
263 2c6q_A GMP reductase 2; TIM ba 95.2 0.13 4.5E-06 50.7 11.6 111 320-433 119-257 (351)
264 1vr6_A Phospho-2-dehydro-3-deo 95.2 0.48 1.6E-05 46.4 15.3 180 303-490 106-314 (350)
265 1h5y_A HISF; histidine biosynt 95.2 0.018 6.3E-07 53.8 5.1 78 409-492 34-112 (253)
266 3khj_A Inosine-5-monophosphate 95.1 0.13 4.5E-06 50.9 11.1 109 321-432 107-240 (361)
267 3tr2_A Orotidine 5'-phosphate 95.0 0.052 1.8E-06 50.4 7.6 74 417-508 153-238 (239)
268 3eoo_A Methylisocitrate lyase; 94.7 1.6 5.3E-05 41.7 17.2 146 329-491 40-244 (298)
269 1qo2_A Molecule: N-((5-phospho 94.7 0.011 3.8E-07 55.2 2.2 78 410-494 31-110 (241)
270 1pii_A N-(5'phosphoribosyl)ant 94.7 0.51 1.7E-05 47.9 14.5 145 324-486 123-282 (452)
271 3ldv_A Orotidine 5'-phosphate 94.6 0.091 3.1E-06 49.2 8.2 73 416-506 170-254 (255)
272 3usb_A Inosine-5'-monophosphat 94.6 0.31 1.1E-05 50.7 12.9 112 318-432 255-392 (511)
273 3pm6_A Putative fructose-bisph 94.4 1.2 4.2E-05 42.4 15.3 163 322-508 96-284 (306)
274 2ze3_A DFA0005; organic waste 94.3 1.1 3.7E-05 42.4 14.9 138 318-490 92-236 (275)
275 3oix_A Putative dihydroorotate 94.3 0.052 1.8E-06 53.4 5.9 46 444-492 262-311 (345)
276 1vcv_A Probable deoxyribose-ph 94.2 0.24 8.2E-06 45.4 9.9 143 302-478 51-211 (226)
277 1jcn_A Inosine monophosphate d 94.2 0.43 1.5E-05 49.7 13.0 112 319-432 255-391 (514)
278 2y88_A Phosphoribosyl isomeras 94.0 0.03 1E-06 52.2 3.5 75 410-491 32-108 (244)
279 3qw3_A Orotidine-5-phosphate d 94.0 0.14 4.7E-06 48.0 8.0 81 419-512 168-254 (255)
280 4e38_A Keto-hydroxyglutarate-a 93.8 0.25 8.7E-06 45.4 9.3 92 376-485 57-153 (232)
281 1vzw_A Phosphoribosyl isomeras 93.6 0.031 1E-06 52.2 2.8 72 410-491 33-109 (244)
282 1xg4_A Probable methylisocitra 93.5 2.9 9.9E-05 39.8 16.4 64 413-490 172-239 (295)
283 2agk_A 1-(5-phosphoribosyl)-5- 93.1 0.17 5.8E-06 47.7 7.0 72 408-492 37-109 (260)
284 4af0_A Inosine-5'-monophosphat 93.0 0.49 1.7E-05 48.7 10.5 113 319-433 281-418 (556)
285 1vs1_A 3-deoxy-7-phosphoheptul 93.0 1.4 4.9E-05 41.6 13.2 180 303-490 38-246 (276)
286 2qiw_A PEP phosphonomutase; st 93.0 1.6 5.5E-05 40.7 13.4 132 321-488 96-238 (255)
287 1vhc_A Putative KHG/KDPG aldol 92.8 1.4 4.9E-05 40.2 12.7 74 394-485 62-136 (224)
288 2wqp_A Polysialic acid capsule 92.8 1.1 3.7E-05 43.8 12.4 157 318-478 35-231 (349)
289 3tjl_A NADPH dehydrogenase; OL 92.7 0.045 1.5E-06 54.9 2.4 78 418-499 274-359 (407)
290 4gj1_A 1-(5-phosphoribosyl)-5- 92.6 0.082 2.8E-06 49.3 4.0 80 408-493 30-111 (243)
291 3lab_A Putative KDPG (2-keto-3 92.6 0.33 1.1E-05 44.1 7.8 90 393-504 57-155 (217)
292 3qja_A IGPS, indole-3-glycerol 92.5 0.71 2.4E-05 43.6 10.4 106 323-432 127-246 (272)
293 1dxe_A 2-dehydro-3-deoxy-galac 92.3 1.8 6.1E-05 40.4 12.9 162 322-489 31-240 (256)
294 1ypf_A GMP reductase; GUAC, pu 92.2 0.51 1.7E-05 46.2 9.3 110 320-432 107-243 (336)
295 1p1x_A Deoxyribose-phosphate a 92.2 1.4 4.7E-05 41.2 11.7 139 301-477 68-221 (260)
296 3g8r_A Probable spore coat pol 92.0 4.4 0.00015 39.5 15.4 156 318-478 21-220 (350)
297 3qw4_B UMP synthase; N-termina 91.9 0.32 1.1E-05 49.6 7.6 79 419-512 169-255 (453)
298 1wv2_A Thiazole moeity, thiazo 91.8 3.3 0.00011 38.3 13.6 125 301-432 73-220 (265)
299 1zlp_A PSR132, petal death pro 91.8 9.6 0.00033 36.6 17.5 145 329-490 57-261 (318)
300 3tsm_A IGPS, indole-3-glycerol 91.7 2.6 8.9E-05 39.7 13.2 106 323-432 134-253 (272)
301 2v5j_A 2,4-dihydroxyhept-2-ENE 91.7 3.4 0.00012 39.2 14.3 163 322-490 51-262 (287)
302 3nav_A Tryptophan synthase alp 91.5 0.97 3.3E-05 42.6 10.0 107 320-432 114-241 (271)
303 3s1x_A Probable transaldolase; 91.4 0.77 2.6E-05 41.8 8.8 164 319-512 41-218 (223)
304 4a29_A Engineered retro-aldol 91.2 2.8 9.4E-05 38.9 12.4 105 324-432 119-237 (258)
305 1jvn_A Glutamine, bifunctional 91.2 0.22 7.5E-06 52.4 5.7 79 410-491 281-372 (555)
306 2p0o_A Hypothetical protein DU 91.1 6.3 0.00021 38.7 15.6 167 318-493 17-229 (372)
307 1wbh_A KHG/KDPG aldolase; lyas 90.9 1.9 6.6E-05 39.0 11.1 74 394-485 61-135 (214)
308 1s2w_A Phosphoenolpyruvate pho 90.9 11 0.00036 35.9 16.7 130 348-490 65-242 (295)
309 3q58_A N-acetylmannosamine-6-p 90.8 0.34 1.2E-05 44.6 6.0 108 321-432 91-214 (229)
310 4a3u_A NCR, NADH\:flavin oxido 90.4 0.38 1.3E-05 47.5 6.4 81 414-499 247-328 (358)
311 1vli_A Spore coat polysacchari 90.4 4.1 0.00014 40.2 13.6 157 318-478 44-243 (385)
312 1ea0_A Glutamate synthase [NAD 90.4 0.22 7.4E-06 57.3 5.0 78 410-490 1006-1097(1479)
313 1dos_A Aldolase class II; lyas 90.3 5.7 0.0002 38.8 14.5 138 330-490 136-292 (358)
314 3qz6_A HPCH/HPAI aldolase; str 90.2 6.6 0.00023 36.6 14.5 162 323-490 29-240 (261)
315 3f4w_A Putative hexulose 6 pho 90.2 0.74 2.5E-05 41.5 7.7 103 323-431 69-190 (211)
316 1vc4_A Indole-3-glycerol phosp 90.1 1.4 4.9E-05 41.0 9.8 78 409-496 65-144 (254)
317 3fa4_A 2,3-dimethylmalate lyas 90.0 7.8 0.00027 36.9 14.8 143 319-508 96-256 (302)
318 1sfl_A 3-dehydroquinate dehydr 89.9 1.6 5.6E-05 40.3 9.9 111 318-433 17-164 (238)
319 3lye_A Oxaloacetate acetyl hyd 89.9 9.3 0.00032 36.5 15.3 131 318-490 103-251 (307)
320 1x7f_A Outer surface protein; 89.8 2.9 9.9E-05 41.3 11.9 169 318-493 41-257 (385)
321 3igs_A N-acetylmannosamine-6-p 89.7 0.51 1.8E-05 43.5 6.3 108 321-432 91-214 (232)
322 3vnd_A TSA, tryptophan synthas 89.7 1.6 5.6E-05 40.9 9.8 39 393-431 200-238 (267)
323 3tjx_A Dihydroorotate dehydrog 89.5 0.33 1.1E-05 47.9 5.1 62 444-508 265-330 (354)
324 3b8i_A PA4872 oxaloacetate dec 89.4 2.6 8.9E-05 40.0 11.0 128 349-490 69-238 (287)
325 2fli_A Ribulose-phosphate 3-ep 89.2 2.3 7.9E-05 38.4 10.4 87 411-504 19-107 (220)
326 1zfj_A Inosine monophosphate d 89.1 2.1 7.2E-05 44.1 11.1 111 319-432 233-369 (491)
327 3iwp_A Copper homeostasis prot 89.1 1.5 5E-05 41.4 8.9 79 400-486 38-131 (287)
328 1yya_A Triosephosphate isomera 89.1 2.1 7.3E-05 39.6 9.9 128 370-500 78-247 (250)
329 3elf_A Fructose-bisphosphate a 89.1 4.6 0.00016 39.3 12.6 143 322-489 115-279 (349)
330 2vws_A YFAU, 2-keto-3-deoxy su 89.0 5.9 0.0002 37.1 13.2 162 322-490 30-241 (267)
331 2yw3_A 4-hydroxy-2-oxoglutarat 88.9 3.2 0.00011 37.3 10.9 95 374-485 34-130 (207)
332 1mo0_A TIM, triosephosphate is 88.7 3 0.0001 39.1 10.7 128 370-500 98-265 (275)
333 3luf_A Two-component system re 88.5 15 0.00051 33.8 18.2 165 302-509 75-246 (259)
334 1ofd_A Ferredoxin-dependent gl 88.3 0.32 1.1E-05 56.1 4.4 78 410-490 1041-1132(1520)
335 2vc6_A MOSA, dihydrodipicolina 88.2 2.6 8.8E-05 40.2 10.3 115 318-474 21-152 (292)
336 1vkf_A Glycerol uptake operon 88.2 2.7 9.4E-05 37.0 9.4 60 414-490 121-182 (188)
337 2gjl_A Hypothetical protein PA 88.1 3.2 0.00011 40.2 11.1 106 318-432 83-205 (328)
338 1yxy_A Putative N-acetylmannos 87.9 4.7 0.00016 36.7 11.7 110 321-432 91-219 (234)
339 2jgq_A Triosephosphate isomera 87.3 2.4 8.1E-05 38.9 8.8 125 370-499 73-230 (233)
340 3r8r_A Transaldolase; pentose 87.2 0.36 1.2E-05 43.6 3.3 159 318-506 38-210 (212)
341 2yr1_A 3-dehydroquinate dehydr 87.1 2.8 9.6E-05 39.1 9.5 149 318-474 32-219 (257)
342 1mxs_A KDPG aldolase; 2-keto-3 87.0 1.9 6.6E-05 39.4 8.2 95 373-485 46-145 (225)
343 3sr7_A Isopentenyl-diphosphate 86.7 0.76 2.6E-05 45.4 5.6 122 352-487 106-238 (365)
344 2i9e_A Triosephosphate isomera 86.5 1.4 4.9E-05 41.0 7.0 129 370-500 78-245 (259)
345 4adt_A Pyridoxine biosynthetic 86.5 1.7 5.8E-05 41.5 7.7 75 406-483 26-104 (297)
346 2qr6_A IMP dehydrogenase/GMP r 86.5 1.3 4.4E-05 44.3 7.3 72 411-487 168-240 (393)
347 1jub_A Dihydroorotate dehydrog 86.4 1.8 6.1E-05 41.6 8.1 111 318-431 106-274 (311)
348 3gr7_A NADPH dehydrogenase; fl 86.3 7.5 0.00026 37.8 12.6 73 373-454 237-324 (340)
349 3b0p_A TRNA-dihydrouridine syn 86.2 4.8 0.00017 39.4 11.2 110 318-431 70-228 (350)
350 3m5v_A DHDPS, dihydrodipicolin 86.1 3.6 0.00012 39.3 10.0 50 318-367 28-82 (301)
351 3noy_A 4-hydroxy-3-methylbut-2 86.0 9.8 0.00034 36.9 12.6 187 301-509 31-262 (366)
352 1rpx_A Protein (ribulose-phosp 85.1 4.6 0.00016 36.7 9.9 84 411-503 26-115 (230)
353 2hjp_A Phosphonopyruvate hydro 85.1 26 0.00089 33.1 15.3 147 329-490 33-239 (290)
354 1mzh_A Deoxyribose-phosphate a 85.1 5.3 0.00018 36.3 10.2 108 322-429 74-205 (225)
355 3si9_A DHDPS, dihydrodipicolin 85.1 4.9 0.00017 38.7 10.4 102 318-461 43-154 (315)
356 1nvm_A HOA, 4-hydroxy-2-oxoval 84.9 1 3.6E-05 44.1 5.6 151 318-478 30-221 (345)
357 2ftp_A Hydroxymethylglutaryl-C 84.9 2.6 9E-05 40.3 8.4 153 318-478 30-230 (302)
358 3eww_A Ompdecase, orotidine-5' 84.8 1.4 4.8E-05 41.2 6.1 52 458-512 193-257 (260)
359 1r2r_A TIM, triosephosphate is 84.8 3.1 0.00011 38.4 8.4 127 370-498 79-244 (248)
360 3flu_A DHDPS, dihydrodipicolin 84.8 5 0.00017 38.3 10.2 41 318-358 28-73 (297)
361 2r8w_A AGR_C_1641P; APC7498, d 84.8 5.7 0.0002 38.5 10.8 49 318-367 55-108 (332)
362 3na8_A Putative dihydrodipicol 84.7 4.6 0.00016 38.9 10.0 41 318-358 45-90 (315)
363 3ble_A Citramalate synthase fr 84.6 7 0.00024 38.0 11.4 155 318-478 41-240 (337)
364 2v82_A 2-dehydro-3-deoxy-6-pho 84.6 6.3 0.00021 35.3 10.4 95 374-485 28-127 (212)
365 3cpr_A Dihydrodipicolinate syn 84.6 6.3 0.00021 37.7 10.9 41 318-358 37-82 (304)
366 1ydn_A Hydroxymethylglutaryl-C 84.6 1.2 4E-05 42.7 5.7 153 318-478 26-226 (295)
367 1o5x_A TIM, triosephosphate is 84.5 6.2 0.00021 36.5 10.2 127 370-500 79-245 (248)
368 2yxg_A DHDPS, dihydrodipicolin 84.4 5.7 0.00019 37.7 10.4 49 318-367 21-74 (289)
369 2ehh_A DHDPS, dihydrodipicolin 84.3 5.7 0.0002 37.8 10.4 49 318-367 21-74 (294)
370 1xky_A Dihydrodipicolinate syn 84.2 5.6 0.00019 38.0 10.3 58 301-358 15-78 (301)
371 3qze_A DHDPS, dihydrodipicolin 84.1 4.9 0.00017 38.7 9.9 41 318-358 44-89 (314)
372 2z6i_A Trans-2-enoyl-ACP reduc 84.1 3.6 0.00012 39.9 9.1 104 320-432 77-195 (332)
373 2a4a_A Deoxyribose-phosphate a 84.1 0.73 2.5E-05 43.5 3.8 61 414-477 178-248 (281)
374 1k68_A Phytochrome response re 83.7 11 0.00039 30.0 10.9 89 406-509 32-132 (140)
375 2ojp_A DHDPS, dihydrodipicolin 83.7 5.6 0.00019 37.8 10.0 49 318-367 22-75 (292)
376 2rfg_A Dihydrodipicolinate syn 83.4 5.6 0.00019 37.9 9.9 49 318-367 21-74 (297)
377 3l21_A DHDPS, dihydrodipicolin 83.2 4.2 0.00014 39.0 8.9 49 318-367 36-89 (304)
378 4avf_A Inosine-5'-monophosphat 83.1 0.99 3.4E-05 46.6 4.7 68 410-486 230-298 (490)
379 1z41_A YQJM, probable NADH-dep 83.0 8.3 0.00028 37.4 11.2 59 373-431 237-310 (338)
380 1qop_A Tryptophan synthase alp 82.9 2.4 8.2E-05 39.9 7.0 39 393-431 199-237 (268)
381 2wkj_A N-acetylneuraminate lya 82.8 6.1 0.00021 37.8 10.0 99 320-460 34-143 (303)
382 3e96_A Dihydrodipicolinate syn 82.8 2.9 0.0001 40.3 7.7 119 320-483 35-166 (316)
383 1aj0_A DHPS, dihydropteroate s 82.7 5 0.00017 37.9 9.1 156 302-460 18-216 (282)
384 1o5k_A DHDPS, dihydrodipicolin 82.6 5.4 0.00018 38.2 9.5 114 318-473 33-163 (306)
385 1p0k_A Isopentenyl-diphosphate 82.6 6.7 0.00023 38.3 10.4 102 327-431 136-283 (349)
386 3jte_A Response regulator rece 82.6 11 0.00037 30.5 10.4 88 407-509 32-124 (143)
387 1twd_A Copper homeostasis prot 82.5 8.7 0.0003 35.5 10.3 92 405-504 5-111 (256)
388 4fxs_A Inosine-5'-monophosphat 82.5 1.1 3.8E-05 46.3 4.8 76 402-486 220-300 (496)
389 3fkr_A L-2-keto-3-deoxyarabona 82.3 8.2 0.00028 37.0 10.7 66 318-384 29-109 (309)
390 2e6f_A Dihydroorotate dehydrog 82.3 2.2 7.5E-05 41.1 6.6 111 318-431 106-276 (314)
391 2yc6_A Triosephosphate isomera 82.3 11 0.00038 34.9 11.0 127 370-500 80-250 (257)
392 3kht_A Response regulator; PSI 82.1 11 0.00039 30.5 10.4 89 406-509 35-129 (144)
393 1aw2_A Triosephosphate isomera 82.1 1.6 5.6E-05 40.5 5.3 129 370-501 81-250 (256)
394 1f6k_A N-acetylneuraminate lya 82.0 7.1 0.00024 37.1 10.1 49 318-367 24-78 (293)
395 3ffs_A Inosine-5-monophosphate 82.0 1.6 5.3E-05 43.6 5.5 69 409-486 144-212 (400)
396 2fiq_A Putative tagatose 6-pho 82.0 15 0.0005 36.7 12.5 77 408-490 187-285 (420)
397 3hv2_A Response regulator/HD d 81.9 20 0.00068 29.4 12.1 88 407-509 43-134 (153)
398 2vxn_A Triosephosphate isomera 81.9 18 0.00061 33.4 12.2 128 370-500 80-248 (251)
399 1vrd_A Inosine-5'-monophosphat 81.9 2.3 8E-05 43.8 7.0 68 411-487 239-307 (494)
400 3bo9_A Putative nitroalkan dio 81.9 8.3 0.00028 37.2 10.6 105 319-432 90-209 (326)
401 1vyr_A Pentaerythritol tetrani 81.7 9.8 0.00033 37.4 11.2 58 373-431 259-326 (364)
402 4ab4_A Xenobiotic reductase B; 81.7 17 0.00058 35.6 12.9 56 375-431 252-311 (362)
403 3drw_A ADP-specific phosphofru 81.7 4.8 0.00016 40.9 9.0 58 132-189 285-353 (474)
404 3bw2_A 2-nitropropane dioxygen 81.7 6.7 0.00023 38.6 10.1 106 319-432 110-241 (369)
405 3dz1_A Dihydrodipicolinate syn 81.6 6.6 0.00023 37.7 9.7 48 318-367 29-81 (313)
406 3gk0_A PNP synthase, pyridoxin 81.6 9.9 0.00034 35.2 10.1 181 319-509 54-269 (278)
407 1izc_A Macrophomate synthase i 81.6 28 0.00095 33.7 14.2 163 322-490 54-278 (339)
408 1k66_A Phytochrome response re 81.6 11 0.00038 30.5 10.2 88 407-509 37-139 (149)
409 2v9d_A YAGE; dihydrodipicolini 81.5 5.6 0.00019 38.8 9.2 114 318-473 52-182 (343)
410 2o7s_A DHQ-SDH PR, bifunctiona 81.4 3.2 0.00011 43.2 7.9 133 318-461 17-180 (523)
411 3daq_A DHDPS, dihydrodipicolin 81.2 5.6 0.00019 37.8 9.0 100 320-460 25-133 (292)
412 3d0c_A Dihydrodipicolinate syn 81.2 6.4 0.00022 37.8 9.5 113 318-473 33-158 (314)
413 2nuw_A 2-keto-3-deoxygluconate 81.2 5.5 0.00019 37.8 8.9 56 402-461 68-129 (288)
414 2r91_A 2-keto-3-deoxy-(6-phosp 81.1 5.6 0.00019 37.7 8.9 56 402-461 67-128 (286)
415 2i1o_A Nicotinate phosphoribos 80.8 2.7 9.2E-05 41.9 6.8 73 411-492 224-304 (398)
416 3tak_A DHDPS, dihydrodipicolin 80.8 6.1 0.00021 37.5 9.1 102 318-461 22-133 (291)
417 1w3i_A EDA, 2-keto-3-deoxy glu 80.5 6.1 0.00021 37.5 9.0 56 402-461 68-129 (293)
418 1m6j_A TIM, TPI, triosephospha 80.5 7.3 0.00025 36.3 9.2 129 370-500 86-255 (261)
419 1y0e_A Putative N-acetylmannos 80.5 3.6 0.00012 37.2 7.1 109 322-432 79-208 (223)
420 1i4n_A Indole-3-glycerol phosp 80.5 18 0.0006 33.5 11.8 104 324-432 116-234 (251)
421 3o1n_A 3-dehydroquinate dehydr 80.4 4.6 0.00016 38.1 7.9 109 318-432 52-197 (276)
422 2gou_A Oxidoreductase, FMN-bin 80.3 9.7 0.00033 37.4 10.6 58 373-431 258-325 (365)
423 3g3d_A UMP synthase, uridine 5 80.3 2.5 8.6E-05 40.5 6.1 42 468-512 266-309 (312)
424 3b4u_A Dihydrodipicolinate syn 80.3 7.7 0.00026 36.9 9.6 117 318-475 24-161 (294)
425 1tre_A Triosephosphate isomera 80.3 2.7 9.1E-05 39.1 6.0 130 370-502 79-249 (255)
426 2vp8_A Dihydropteroate synthas 80.1 9.4 0.00032 36.6 10.1 156 302-460 45-248 (318)
427 2cw6_A Hydroxymethylglutaryl-C 79.8 28 0.00096 32.9 13.5 105 322-427 84-231 (298)
428 2btm_A TIM, protein (triosepho 79.6 2.6 9.1E-05 39.0 5.8 128 370-500 78-247 (252)
429 2j27_A Triosephosphate isomera 79.6 11 0.00037 34.8 9.9 127 370-500 79-247 (250)
430 3gl9_A Response regulator; bet 79.6 13 0.00043 29.3 9.5 85 407-506 31-120 (122)
431 3tha_A Tryptophan synthase alp 79.5 4.9 0.00017 37.3 7.6 39 393-432 193-231 (252)
432 2ffc_A Orotidine 5-monophospha 79.5 2.9 9.8E-05 40.9 6.3 68 444-512 277-350 (353)
433 3f6p_A Transcriptional regulat 79.3 7.3 0.00025 30.6 8.0 85 407-506 31-117 (120)
434 1geq_A Tryptophan synthase alp 79.3 2.4 8.1E-05 39.2 5.5 68 413-487 24-116 (248)
435 3nhm_A Response regulator; pro 79.3 19 0.00065 28.5 10.7 88 407-509 32-123 (133)
436 2ekc_A AQ_1548, tryptophan syn 79.3 7.4 0.00025 36.3 9.0 39 393-432 200-238 (262)
437 3qfe_A Putative dihydrodipicol 79.2 8.9 0.0003 36.9 9.7 41 318-358 32-77 (318)
438 3h5i_A Response regulator/sens 79.2 8.8 0.0003 31.1 8.6 89 407-509 34-125 (140)
439 4e7p_A Response regulator; DNA 79.2 13 0.00043 30.6 9.7 89 405-508 49-140 (150)
440 3i4e_A Isocitrate lyase; struc 79.2 50 0.0017 33.0 15.1 148 319-491 168-357 (439)
441 3eeg_A 2-isopropylmalate synth 78.9 9.2 0.00032 36.9 9.8 153 318-478 28-225 (325)
442 1o66_A 3-methyl-2-oxobutanoate 78.8 15 0.00053 34.3 10.8 41 412-464 165-205 (275)
443 1ney_A TIM, triosephosphate is 78.6 9.8 0.00033 35.1 9.2 127 370-499 78-243 (247)
444 3a5f_A Dihydrodipicolinate syn 78.6 5.1 0.00017 38.1 7.7 49 318-367 22-75 (291)
445 3tr9_A Dihydropteroate synthas 78.4 14 0.00047 35.4 10.6 157 302-460 31-233 (314)
446 1eye_A DHPS 1, dihydropteroate 78.3 15 0.00052 34.5 10.8 155 302-460 9-208 (280)
447 3zwt_A Dihydroorotate dehydrog 78.2 9.4 0.00032 37.6 9.7 26 406-431 305-330 (367)
448 1tx2_A DHPS, dihydropteroate s 78.1 7.7 0.00026 36.9 8.7 156 302-460 43-235 (297)
449 2qkf_A 3-deoxy-D-manno-octulos 78.0 19 0.00066 33.8 11.4 134 349-490 73-240 (280)
450 2nwr_A 2-dehydro-3-deoxyphosph 77.9 36 0.0012 31.7 13.1 133 348-490 61-226 (267)
451 3hdg_A Uncharacterized protein 77.4 18 0.00063 28.8 10.1 88 407-509 36-126 (137)
452 1o60_A 2-dehydro-3-deoxyphosph 77.3 25 0.00086 33.2 12.0 134 349-490 76-243 (292)
453 2zay_A Response regulator rece 77.3 14 0.00047 30.1 9.4 88 407-509 37-129 (147)
454 3h5d_A DHDPS, dihydrodipicolin 77.2 10 0.00035 36.4 9.4 116 317-474 27-160 (311)
455 2ftp_A Hydroxymethylglutaryl-C 77.0 12 0.0004 35.7 9.8 105 322-427 87-234 (302)
456 3tml_A 2-dehydro-3-deoxyphosph 77.0 42 0.0014 31.6 13.3 133 349-490 75-246 (288)
457 2bdq_A Copper homeostasis prot 76.9 9.6 0.00033 34.5 8.5 92 406-505 6-115 (224)
458 3gka_A N-ethylmaleimide reduct 76.7 26 0.00089 34.2 12.4 56 375-431 260-319 (361)
459 3gt7_A Sensor protein; structu 76.6 17 0.00057 30.0 9.8 89 406-509 35-128 (154)
460 1eep_A Inosine 5'-monophosphat 76.5 2.3 7.8E-05 42.6 4.8 67 410-485 154-221 (404)
461 2yxb_A Coenzyme B12-dependent 76.5 6.4 0.00022 33.7 7.1 86 410-508 57-145 (161)
462 1xg4_A Probable methylisocitra 76.3 15 0.00052 34.8 10.2 87 400-489 16-117 (295)
463 2r14_A Morphinone reductase; H 76.1 13 0.00044 36.7 10.1 58 373-431 263-331 (377)
464 3m9y_A Triosephosphate isomera 76.0 8.5 0.00029 35.6 8.1 125 370-498 82-249 (254)
465 3qm3_A Fructose-bisphosphate a 75.9 23 0.00077 34.5 11.4 140 328-490 132-291 (357)
466 3kcn_A Adenylate cyclase homol 75.8 22 0.00076 29.0 10.4 87 407-508 32-123 (151)
467 3gdm_A Orotidine 5'-phosphate 75.6 3.9 0.00013 38.3 5.8 42 468-512 219-262 (267)
468 3kru_A NADH:flavin oxidoreduct 75.6 15 0.00052 35.7 10.3 55 376-431 241-310 (343)
469 1ujp_A Tryptophan synthase alp 75.4 5 0.00017 37.7 6.5 38 393-432 196-233 (271)
470 2gdq_A YITF; mandelate racemas 74.6 65 0.0022 31.5 14.9 114 318-478 141-260 (382)
471 3eul_A Possible nitrate/nitrit 74.6 19 0.00065 29.4 9.6 88 406-508 45-135 (152)
472 4ay7_A Methylcobalamin\: coenz 74.4 56 0.0019 31.5 14.2 84 320-403 192-287 (348)
473 2qzj_A Two-component response 74.4 29 0.001 27.7 10.6 87 407-508 33-121 (136)
474 3cnb_A DNA-binding response re 74.2 23 0.0008 28.2 9.9 88 406-508 38-130 (143)
475 4eiv_A Deoxyribose-phosphate a 74.2 20 0.0007 33.7 10.2 150 301-489 83-275 (297)
476 2oz8_A MLL7089 protein; struct 74.1 10 0.00035 37.6 8.9 46 442-490 230-277 (389)
477 1ccw_A Protein (glutamate muta 73.8 10 0.00035 31.4 7.5 94 399-506 31-134 (137)
478 3s5o_A 4-hydroxy-2-oxoglutarat 73.8 7 0.00024 37.4 7.3 72 401-474 85-168 (307)
479 3eod_A Protein HNR; response r 73.7 17 0.00059 28.6 8.9 67 407-483 36-105 (130)
480 3t6k_A Response regulator rece 73.6 24 0.00082 28.3 9.8 87 407-508 33-124 (136)
481 2nli_A Lactate oxidase; flavoe 73.5 48 0.0016 32.4 13.4 44 441-487 215-258 (368)
482 3sz8_A 2-dehydro-3-deoxyphosph 73.4 49 0.0017 31.1 12.7 134 349-490 78-245 (285)
483 3r2g_A Inosine 5'-monophosphat 73.3 3.2 0.00011 40.8 4.7 68 410-486 101-169 (361)
484 1h1y_A D-ribulose-5-phosphate 73.1 24 0.00084 31.8 10.6 81 411-503 22-110 (228)
485 3aty_A Tcoye, prostaglandin F2 73.1 26 0.00088 34.5 11.4 56 375-431 276-339 (379)
486 1i3c_A Response regulator RCP1 73.0 36 0.0012 27.6 11.3 87 406-507 38-136 (149)
487 3b2n_A Uncharacterized protein 72.9 32 0.0011 27.2 10.4 88 405-507 32-122 (133)
488 3fs2_A 2-dehydro-3-deoxyphosph 72.8 39 0.0013 31.9 11.9 157 347-509 97-295 (298)
489 1icp_A OPR1, 12-oxophytodienoa 72.8 15 0.00053 36.1 9.7 56 375-431 266-333 (376)
490 1m5w_A Pyridoxal phosphate bio 72.7 42 0.0014 30.5 11.5 181 319-509 26-241 (243)
491 3heb_A Response regulator rece 72.7 26 0.00088 28.6 10.0 84 407-505 35-132 (152)
492 2h6r_A Triosephosphate isomera 72.5 16 0.00055 32.9 9.1 104 324-431 75-202 (219)
493 2qsj_A DNA-binding response re 72.5 26 0.00088 28.6 9.9 88 405-507 32-123 (154)
494 1gox_A (S)-2-hydroxy-acid oxid 72.2 42 0.0014 32.9 12.7 43 442-487 212-254 (370)
495 1dbw_A Transcriptional regulat 72.2 25 0.00086 27.5 9.5 85 407-506 32-119 (126)
496 1qkk_A DCTD, C4-dicarboxylate 72.1 28 0.00096 28.5 10.1 86 407-507 32-120 (155)
497 1tqj_A Ribulose-phosphate 3-ep 72.1 33 0.0011 31.0 11.2 83 411-503 20-109 (230)
498 4h3d_A 3-dehydroquinate dehydr 71.8 12 0.0004 34.9 8.1 106 318-425 32-173 (258)
499 2yci_X 5-methyltetrahydrofolat 71.6 15 0.00053 34.3 8.9 116 318-433 34-174 (271)
500 3hzh_A Chemotaxis response reg 71.2 17 0.00057 30.1 8.4 84 407-505 66-154 (157)
No 1
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-41 Score=360.61 Aligned_cols=293 Identities=37% Similarity=0.561 Sum_probs=240.4
Q ss_pred cccccccccCCCCCeEEEEecCCCCChhcHHHHHHHHHHcCceeeecceEeeeecCCCeeeeEecCHHHHHHHHHHHHcC
Q 010240 8 ASATTTEQYKMKIPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTAGVQGVNIVPEDFVAAQLKSVLSD 87 (514)
Q Consensus 8 ~~~r~~~~~k~~~~~vL~i~g~d~~ggag~~a~~~~l~~~g~~~~~~~t~~~~~n~~~~~~~~~~~~~~~~~~l~~l~~~ 87 (514)
.|+....+|||++|+||+|+|||++||||++||+++|+++|+++++++|+++.||+.++..+..+|++++.+|++.++++
T Consensus 10 ~~~~~~~~~~~~~~~vL~IaGsd~~gGAgi~Adlktl~a~g~~~~~~~Tavt~q~~~~v~~~~~~p~~~v~~ql~~~~~d 89 (550)
T 3rm5_A 10 PPPYLTLACNEKLPTVLSIAGTDPSGGAGIEADVKTITAHRCYAMTCITALNAQTPVKVYSINNTPKEVVFQTLESNLKD 89 (550)
T ss_dssp CCTTGGGGTTBCCCEEEEEEEBCTTSSSHHHHHHHHHHHTTCEEEEEEEEEEEECSSCEEEEEECCHHHHHHHHHHHHHH
T ss_pred CCcccccccCCCCCEEEEEeCcCCCcHHHHHHHHHHHHHcCCeeceeceEEEeecCCCcceEEECCHHHHHHHHHHHHhC
Confidence 45666788999999999999999999999999999999999999999999999999999999899999999999999988
Q ss_pred CCcCEEEEcccCCHHHHHHHHHHHhcC--CCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhC
Q 010240 88 MQVDVVKTGMLPSTDLVKVLLQSLSEF--PVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLG 165 (514)
Q Consensus 88 ~~~~~i~~G~~~~~~~~~~~~~~~~~~--~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g 165 (514)
.++|+|++||+ +.++++.+.+++++. ..+++|+||||++++|..+++++..+.+++++++.++|||||..|++.|+|
T Consensus 90 ~~~daIkiG~l-s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll~~a~iitPN~~Ea~~L~g 168 (550)
T 3rm5_A 90 MKCNVIKTGML-TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAGKDIVSLITEKVAPFADILTPNIPECYKLLG 168 (550)
T ss_dssp BCCSEEEECSC-CHHHHHHHHHHHHHHGGGSCEEEECCCC---------CTTHHHHHHHHTGGGCSEECCBHHHHHHHHS
T ss_pred CCCCEEEECCC-CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCCHHHHHHHHHHhhCcceEEecCHHHHHHHhC
Confidence 89999999999 999999999998775 234599999999888888888888888887899999999999999999998
Q ss_pred CC-CCCCHHHHHHHHHHHHhcCC-CeEEEecccCCCC----CCceEEEEe--CCeEEEEeecccCCCCCCCCcchHHHHH
Q 010240 166 GM-QVVTVADMCSAAKLLHNLGP-RTVLVKGGDLPDS----SDAVDIFFD--GEDFHELRSSRVNTRNTHGTGCTLASCI 237 (514)
Q Consensus 166 ~~-~~~~~~~~~~~a~~l~~~g~-~~Vvvt~g~~g~~----~~~~~~~~~--~~~~~~~~~~~~~~~d~~GaGD~f~a~i 237 (514)
.. .+.+.+++.+++++|.++|. +.|+||+|+.+.. ....++++. +++.+.++.++++.++++|+||+|+|+|
T Consensus 169 ~~~~i~~~~d~~~aa~~L~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v~~~~t~GtGD~fsaai 248 (550)
T 3rm5_A 169 EERKVNGLQDIFQIAKDLAKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFVNTTHTHGTGCTLASAI 248 (550)
T ss_dssp CCCCCCSSHHHHHHHHHHHHHHCCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEECCCCSCCBTHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCcCCCCCcChhHHHHHHH
Confidence 42 35566788999999999887 7999999885311 113346774 5566778888888789999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHhcccccccCCC-CCCCccccccccccccccccccccCCCC
Q 010240 238 AAELAKGSPMLSAVKVAKCFVETALDYSKDIVIGSG-PQGPFDHLLRLKSTSRQSHRAEAFNPSD 301 (514)
Q Consensus 238 ~~~l~~g~~l~~A~~~A~~~~~~~i~~~~~~~~g~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (514)
+++|++|.++.+|++.|+.+++.+|+.+..+..|.| .+||+||+..+.....++.+..++.+++
T Consensus 249 aa~La~G~~l~eAv~~A~~~v~~ai~~~~~~g~g~~~~~gp~~h~~~~~~~~~~~~~~~~~~~~~ 313 (550)
T 3rm5_A 249 ASNLARGYSLPQSVYGGIEYVQNAVAIGCDVTKETVKDNGPINHVYAVEIPLEKMLSDECFTASD 313 (550)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHHCBCCBCTTCCSCCBCCTTTTCCCHHHHHHSCTTCCCCC
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcCchhhhcchhhhhcccccccccc
Confidence 999999999999999999999999999987643422 2789999988776555555545565544
No 2
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-39 Score=308.72 Aligned_cols=203 Identities=33% Similarity=0.480 Sum_probs=186.7
Q ss_pred CceEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCC---------CCHHHHHHHHHHHHHHHhhcCceEEEcCcH
Q 010240 301 DLFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKD---------ADTRGFLEAAKACLQICCVHGVPLLINDRI 371 (514)
Q Consensus 301 ~~~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~ 371 (514)
.+++|+|||+.... +++.+.+++++++|+++||||+|+ .+..++.++++++.++|++++++++|||++
T Consensus 29 ~~~lylIt~~~~~~---~~~~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~liInd~~ 105 (243)
T 3o63_A 29 SARLYLCTDARRER---GDLAQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGALFAVNDRA 105 (243)
T ss_dssp HCCEEEEECCCTTT---CCHHHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCEEEEESCH
T ss_pred CCcEEEEECCCccc---chHHHHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCEEEEeCHH
Confidence 47899999986543 579999999999999999999999 668999999999999999999999999999
Q ss_pred HHHHhCCCCeEEeCCCCCCHHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHH
Q 010240 372 DIALACDADGVHLGQSDMPARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVC 451 (514)
Q Consensus 372 ~~a~~~ga~gvhl~~~~~~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~ 451 (514)
++|.++||||||+++.+++...+|+.++++.++|+||||++|+.+|.+.|+|||++||+|||.+|++.++.|++.+++++
T Consensus 106 ~lA~~~gAdGVHLg~~dl~~~~~r~~~~~~~~iG~S~ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~ 185 (243)
T 3o63_A 106 DIARAAGADVLHLGQRDLPVNVARQILAPDTLIGRSTHDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAA 185 (243)
T ss_dssp HHHHHHTCSEEEECTTSSCHHHHHHHSCTTCEEEEEECSHHHHHHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHH
T ss_pred HHHHHhCCCEEEecCCcCCHHHHHHhhCCCCEEEEeCCCHHHHHHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988788999999999
Q ss_pred Hc--CCCCEEEECCCCcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 452 LA--SKLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 452 ~~--~~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
+. .++||+|+|||+++|+.+++++|++ ||+++|+||+++||.+.+++|++.+++.
T Consensus 186 ~~~~~~iPvvAiGGI~~~ni~~~~~aGa~---gvav~sai~~a~dp~~a~~~l~~~~~~~ 242 (243)
T 3o63_A 186 ELGGDDKPWFAIGGINAQRLPAVLDAGAR---RIVVVRAITSADDPRAAAEQLRSALTAA 242 (243)
T ss_dssp TC---CCCEEEESSCCTTTHHHHHHTTCC---CEEESHHHHTCSSHHHHHHHHHHHHHTC
T ss_pred HhccCCCCEEEecCCCHHHHHHHHHcCCC---EEEEeHHHhCCCCHHHHHHHHHHHHHhc
Confidence 86 4899999999999999999999999 9999999999999999999999988753
No 3
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=100.00 E-value=8e-40 Score=319.80 Aligned_cols=246 Identities=20% Similarity=0.258 Sum_probs=206.6
Q ss_pred CCCCeEEEEecCCCCChhcHHHHHHHHHHcCceeeecceEeeeecCCCeeeeEecCH-HHHHHHHHHHH-cCCCcCEEEE
Q 010240 18 MKIPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTAGVQGVNIVPE-DFVAAQLKSVL-SDMQVDVVKT 95 (514)
Q Consensus 18 ~~~~~vL~i~g~d~~ggag~~a~~~~l~~~g~~~~~~~t~~~~~n~~~~~~~~~~~~-~~~~~~l~~l~-~~~~~~~i~~ 95 (514)
|++++||+|+|+|++||||++||+++++++|+++++++|++++||+.++..+...+. +++.++++.+. .++++|+|++
T Consensus 1 m~~~~vL~I~~~~~~GgaGi~Adl~~~~a~G~~~~~v~Ta~~sq~t~g~~~~~~~~~~~~~~~~~~~~~~~d~~~daik~ 80 (282)
T 3h74_A 1 MSLSTMLVAEDLSAVGGISLSSALPVLTAMQYDVAALPTSLLSTHTSGYGTPAVVDLSTWLPQVFAHWTRAQLHFDQALI 80 (282)
T ss_dssp -CCEEEEEEEEEEEESSCHHHHHHHHHHHTTEEEEEEEEEEEEECSSSSSSCCEECCTTTHHHHHHHHHHTTCCCSEEEE
T ss_pred CCCCeEEEEeCcCCCChHHHHHHHHHHHHcCCeeeeEEEEEeeEcCCCcceeeeecChHHHHHHHHHHHHcCCccCEEEE
Confidence 467899999999999999999999999999999999999999999988876533332 57777887776 5789999999
Q ss_pred cccCCHHHHHHHHHHHhcCCCCcEEEecceecCCC-CCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCCCCCCCHHH
Q 010240 96 GMLPSTDLVKVLLQSLSEFPVRALVVDPVMVSTSG-DVLAGPSTITGLRENLLPMADIVTPNVKEASALLGGMQVVTVAD 174 (514)
Q Consensus 96 G~~~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g-~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~~~~~~~ 174 (514)
||+.+.+.++.+.+++++++..++|+||||++.++ ..+++++..+.++ ++++.+|+||||..|++.|+| .+..+.++
T Consensus 81 G~l~s~~~i~~v~~~l~~~~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~-~ll~~adiitpN~~Ea~~L~g-~~~~~~~~ 158 (282)
T 3h74_A 81 GYVGSVALCQQITTYLEQQTLSLLVVDPVLGDLGQLYQGFDQDYVAAMR-QLIQQADVILPNTTEAALLTG-APYQVTPD 158 (282)
T ss_dssp CCCCSHHHHHHHHHHHHHSCCSEEEECCCCEETTEECTTCCHHHHHHHH-HHGGGCSEECCCHHHHHHHHT-CCCCSSCC
T ss_pred CCCCCHHHHHHHHHHHHHCCCCcEEEcCeeecCCCCCCCCCHHHHHHHH-HHhccCCEECCCHHHHHHHhC-CCCCCHHH
Confidence 99999999999999999876556999999996433 1346788777777 799999999999999999998 55444567
Q ss_pred HHHHHHHHHh-cCC-CeEEEecccCCCCCCceEEEEe-CCeEEEEeecccCCCCCCCCcchHHHHHHHHHHcCCCHHHHH
Q 010240 175 MCSAAKLLHN-LGP-RTVLVKGGDLPDSSDAVDIFFD-GEDFHELRSSRVNTRNTHGTGCTLASCIAAELAKGSPMLSAV 251 (514)
Q Consensus 175 ~~~~a~~l~~-~g~-~~Vvvt~g~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~~g~~l~~A~ 251 (514)
..+++++|.+ +|+ +.|++|+|+.+ +....++++ +++.++++.++++ +|++||||+|+|+|+++|++|+++++|+
T Consensus 159 ~~~aa~~L~~~~g~~~~Vvvt~G~~~--~~~g~~~~~~~~~~~~~~~~~v~-~dt~GaGD~fsaai~a~l~~g~~l~~A~ 235 (282)
T 3h74_A 159 LEVILPALQAQLKTGAHAVITDVQRA--DQIGCAWLDEAGHVQYCGARRLP-GHYNGTGDTLAAVIAGLLGRGYPLAPTL 235 (282)
T ss_dssp HHHHHHHHHTTSCTTCEECEEEEEET--TEEEEEEECTTSCEEEEEEECCS-SCCTTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEEEecCCC--CceEEEEEeCCCeEEEEEecCCC-CCCcCHHHHHHHHHHHHHHCCCCHHHHH
Confidence 8889999998 899 99999998621 111145564 5566778887776 7999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccc
Q 010240 252 KVAKCFVETALDYSKDI 268 (514)
Q Consensus 252 ~~A~~~~~~~i~~~~~~ 268 (514)
++|+.+++.+++.+.+.
T Consensus 236 ~~A~~~~~~ai~~~~~~ 252 (282)
T 3h74_A 236 ARANQWLNMAVAETIAQ 252 (282)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhC
Confidence 99999999999998765
No 4
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=100.00 E-value=1.7e-37 Score=302.84 Aligned_cols=259 Identities=39% Similarity=0.617 Sum_probs=223.9
Q ss_pred CCCCeEEEEecCCCCChhcHHHHHHHHHHcCceeeecceEeeeecCCC--eeeeEecCHHHHHHHHHHHHcCCCcCEEEE
Q 010240 18 MKIPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTAG--VQGVNIVPEDFVAAQLKSVLSDMQVDVVKT 95 (514)
Q Consensus 18 ~~~~~vL~i~g~d~~ggag~~a~~~~l~~~g~~~~~~~t~~~~~n~~~--~~~~~~~~~~~~~~~l~~l~~~~~~~~i~~ 95 (514)
+++++||+|+|+|++||+|+++|+++++++|+++++++|+++.+|+.+ ...+..++++++.++++.+.++.++|+|++
T Consensus 1 ~~~~~vl~i~G~d~~gga~~~a~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~v~~ 80 (271)
T 2i5b_A 1 MSMHKALTIAGSDSSGGAGIQADLKTFQEKNVYGMTALTVIVAMDPNNSWNHQVFPIDTDTIRAQLATITDGIGVDAMKT 80 (271)
T ss_dssp --CCEEEEEEEEETTSSSHHHHHHHHHHHTTCEEEEEEEEEEEEETTTTTEEEEEECCHHHHHHHHHHHHHHSCCSEEEE
T ss_pred CCCCEEEEEeCcCCCchHHHHHHHHHHHHcCCEEeEEeeEEEeEcCCCCceeEEEeCCHHHHHHHHHHHHhCCCCCEEEE
Confidence 356899999999999999999999999999999999999999888877 667778898888888888877678999999
Q ss_pred cccCCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCCCC-CCCHHH
Q 010240 96 GMLPSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGGMQ-VVTVAD 174 (514)
Q Consensus 96 G~~~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~-~~~~~~ 174 (514)
|++.+.+.++.+.+.+++.+.+++|+|||+++.++..+++++..+.+++++++.+|++|||..|++.|+| .. ..+.++
T Consensus 81 G~l~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L~g-~~~~~~~~~ 159 (271)
T 2i5b_A 81 GMLPTVDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLSG-MDELKTVDD 159 (271)
T ss_dssp CCCCSHHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHHHT-CCCCCSHHH
T ss_pred CCCCCHHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHHhC-CCCCCCHHH
Confidence 9998888899999999988763599999999888877787766666765788999999999999999998 54 556778
Q ss_pred HHHHHHHHHhcCCCeEEEeccc--CCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHHHcCCCHHHHHH
Q 010240 175 MCSAAKLLHNLGPRTVLVKGGD--LPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELAKGSPMLSAVK 252 (514)
Q Consensus 175 ~~~~a~~l~~~g~~~Vvvt~g~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~~g~~l~~A~~ 252 (514)
..+++++|.++|++.|++|+|+ +| ....++++++++.++++.++++++|++|+||+|+|+|+++|++|+++++|++
T Consensus 160 ~~~~a~~l~~~g~~~Vvvt~g~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~g~~~~~A~~ 237 (271)
T 2i5b_A 160 MIEAAKKIHALGAQYVVITGGGKLKH--EKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFSAAVTAELAKGAEVKEAIY 237 (271)
T ss_dssp HHHHHHHHHTTTCSEEEEECGGGSCS--SSEEEEEECSSCEEEEEECCCCCSCCBTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEcCCCCCCC--CceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHcCCCHHHHHH
Confidence 8899999999999999999998 55 1122466777777888888888889999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccccCCCCCCCccccc
Q 010240 253 VAKCFVETALDYSKDIVIGSGPQGPFDHLL 282 (514)
Q Consensus 253 ~A~~~~~~~i~~~~~~~~g~g~~~~~~~~~ 282 (514)
+|+.++..+++.+.+. |.| .+|++|..
T Consensus 238 ~A~~~~~~~~~~~~~~--g~g-~~~~~~~~ 264 (271)
T 2i5b_A 238 AAKEFITAAIKESFPL--NQY-VGPTKHSA 264 (271)
T ss_dssp HHHHHHHHHHHTCCCS--SSS-CCBCCTTH
T ss_pred HHHHHHHHHHHHhhcc--CCC-CCCcCCcc
Confidence 9999999999988766 777 67888853
No 5
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=100.00 E-value=7.1e-38 Score=307.58 Aligned_cols=244 Identities=19% Similarity=0.278 Sum_probs=201.5
Q ss_pred CCeEEEEecCCCCChhcHHHHHHHHHHcCceeeecceEeeeecCCCeeeeE--ecCHHHHHHHHHHHH-cCCCcCEEEEc
Q 010240 20 IPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTAGVQGVN--IVPEDFVAAQLKSVL-SDMQVDVVKTG 96 (514)
Q Consensus 20 ~~~vL~i~g~d~~ggag~~a~~~~l~~~g~~~~~~~t~~~~~n~~~~~~~~--~~~~~~~~~~l~~l~-~~~~~~~i~~G 96 (514)
+++||+|+|+|++||||++||+++++++|+++++++|++++||+ ++..+. .++ +.+..+++.+. +++++|+|++|
T Consensus 7 m~~vL~I~g~d~~GgaGi~adl~~~~a~G~~~~~v~Ta~~sq~t-g~~~~~~~~~~-~~~~~~~~~~~~~d~~~~aik~G 84 (291)
T 3mbh_A 7 VKKIAAVHDLSGMGRVSLTVVIPILSSMGFQVCPLPTAVLSNHT-QYPGFSFLDLT-DEMPKIIAEWKKLEVQFDAIYTG 84 (291)
T ss_dssp CCEEEEECCEEEESSCTHHHHHHHHHHTTCEEEECCCEEEEECT-TSSCCCEEECT-TTHHHHHHHHHHTTCCCSEEEEC
T ss_pred cCcEEEEeCCCCCCcHHHHHHHHHHHHcCCeeeEEEEEEeccCC-CCCCeeecCcH-HHHHHHHHHHHhcCCccCEEEEC
Confidence 68999999999999999999999999999999999999999999 876654 333 45666666665 46899999999
Q ss_pred ccCCHHHHHHHHHHHhcCC--CCcEEEecceecCCC-CCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCCCCCC---
Q 010240 97 MLPSTDLVKVLLQSLSEFP--VRALVVDPVMVSTSG-DVLAGPSTITGLRENLLPMADIVTPNVKEASALLGGMQVV--- 170 (514)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~--~~~ivlDPv~~~~~g-~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~~~--- 170 (514)
|+.+.+.++.+.+++++++ ..++|+||||++.++ ..+++++..+.++ ++++.+|+||||..|++.|+| .+..
T Consensus 85 ~l~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~-~ll~~adiitpN~~Ea~~L~g-~~~~~~~ 162 (291)
T 3mbh_A 85 YLGSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMR-HLITKADVITPNLTELFYLLD-EPYKADS 162 (291)
T ss_dssp CCSSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHH-HHGGGCSEECCBHHHHHHHHT-CCCCSCC
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHH-HHhccCCEEeCCHHHHHHHhC-CCCCCCC
Confidence 9999999999999988753 236999999996433 2345777777776 799999999999999999998 4432
Q ss_pred CHHHHHHHHHHHHhcCCCeEEEecccCCCC-CCceEEEEeC--CeEEEEeecccCCCCCCCCcchHHHHHHHHHHcCCCH
Q 010240 171 TVADMCSAAKLLHNLGPRTVLVKGGDLPDS-SDAVDIFFDG--EDFHELRSSRVNTRNTHGTGCTLASCIAAELAKGSPM 247 (514)
Q Consensus 171 ~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~-~~~~~~~~~~--~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~~g~~l 247 (514)
+.++..+++++|.++|++.|++|+|+..++ +....+++++ ++.++++.++++ +|++||||+|+|+|+++|++|.++
T Consensus 163 ~~~~~~~aa~~L~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~-~dt~GaGD~f~aai~a~l~~g~~l 241 (291)
T 3mbh_A 163 TDEELKEYLRLLSDKGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYLP-AHYPGTGDTFTSVITGSLMQGDSL 241 (291)
T ss_dssp CHHHHHHHHHHHHHTSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCCG-GGSTTHHHHHHHHHHHHHHTTCCH
T ss_pred CHHHHHHHHHHHHhhCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEecccC-CCCCChHHHHHHHHHHHHHcCCCH
Confidence 678889999999999999999998863100 0111466665 345677877776 799999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccccc
Q 010240 248 LSAVKVAKCFVETALDYSKDI 268 (514)
Q Consensus 248 ~~A~~~A~~~~~~~i~~~~~~ 268 (514)
++|+++|+.+++.+|+.+.+.
T Consensus 242 ~~A~~~A~~~~~~ai~~~~~~ 262 (291)
T 3mbh_A 242 PMALDRATQFILQGIRATFGY 262 (291)
T ss_dssp HHHHHHHHHHHHHHHHTTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999988754
No 6
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=100.00 E-value=2.7e-36 Score=292.18 Aligned_cols=256 Identities=48% Similarity=0.734 Sum_probs=212.7
Q ss_pred CCeEEEEecCCCCChhcHHHHHHHHHHcCceeeecceEeeeecCCCeeeeEecCHHHHHHHHHHHHcCCCcCEEEEcccC
Q 010240 20 IPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTAGVQGVNIVPEDFVAAQLKSVLSDMQVDVVKTGMLP 99 (514)
Q Consensus 20 ~~~vL~i~g~d~~ggag~~a~~~~l~~~g~~~~~~~t~~~~~n~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~i~~G~~~ 99 (514)
+++||+|+|+|++||+|+++|+++++++|+++++++|+++.+|+..+..+..++++.+.++++.++++.+++++++|++.
T Consensus 1 ~~~vl~i~G~d~~ggag~~a~~~~~~~~~~~g~~~vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~l~ 80 (258)
T 1ub0_A 1 MRVALTIAGSDSGGGAGVQADLKVFFRFGVYGTSALTLVTAQNTLGVQRVHLLPPEVVYAQIESVAQDFPLHAAKTGALG 80 (258)
T ss_dssp CCEEEEEEEEETTSSSHHHHHHHHHHHTTCEEEEEEEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred CCEEEEEeccCCCchHHHHHHHHHHHHhCCEEeEeeeEEEeecCCceeEEEeCCHHHHHHHHHHHHcCCCCCEEEECCcC
Confidence 57899999999999999999999999999999999999999998776667788898888888888777788999999998
Q ss_pred CHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCCCCCCCHHHHHHHH
Q 010240 100 STDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGGMQVVTVADMCSAA 179 (514)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~~~~~~~~~~~a 179 (514)
+.+.++.+.+.+++.+..++++||++++.+|..+++++..+.+++++++++|++|||..|++.|+| ....+.++..+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g-~~~~~~~~~~~~a 159 (258)
T 1ub0_A 81 DAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLG-RPIRTLKEAEEAA 159 (258)
T ss_dssp SHHHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHHC-SCCCSHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccChHHHHHHHHhhcccCeEEeCCHHHHHHHhC-CCCCCHHHHHHHH
Confidence 888889999999987723499999999878877777665566666788999999999999999998 5555667888999
Q ss_pred HHHHhcCCCeEEEecccC-CCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 010240 180 KLLHNLGPRTVLVKGGDL-PDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELAKGSPMLSAVKVAKCFV 258 (514)
Q Consensus 180 ~~l~~~g~~~Vvvt~g~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~~g~~l~~A~~~A~~~~ 258 (514)
++|.++|++.|++|+|+. |. ...++++++++.++++.++++++|++|+||+|+|+|+++|++|+++++|+++|+.++
T Consensus 160 ~~l~~~g~~~vvvt~g~~~G~--~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~g~~~~~a~~~a~~~~ 237 (258)
T 1ub0_A 160 KALLALGPKAVLLKGGHLEGE--EAVDLLATRGGVLRFSAPRVHTRNTHGTGCTLSAAIAALLAKGRPLAEAVAEAKAYL 237 (258)
T ss_dssp HHHHTTSCSCEEEEEEECC-----EEEEEEETTEEEEEEECCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEccCCCCCC--ceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 999999999999999985 41 222466777777888888888899999999999999999999999999999999999
Q ss_pred HHHHhcccccccCCCCCCCcccc
Q 010240 259 ETALDYSKDIVIGSGPQGPFDHL 281 (514)
Q Consensus 259 ~~~i~~~~~~~~g~g~~~~~~~~ 281 (514)
+.+++.+.+. |.| .+|++|+
T Consensus 238 ~~~~~~~~~~--~~g-~~~~~~~ 257 (258)
T 1ub0_A 238 TRALKTAPSL--GHG-HGPLDHW 257 (258)
T ss_dssp HHHHHTCCCC--SSS-SCCCCTT
T ss_pred HHHHHHhhcc--CCC-CCCCccC
Confidence 9999988766 667 5677763
No 7
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=100.00 E-value=1.4e-36 Score=298.56 Aligned_cols=248 Identities=20% Similarity=0.259 Sum_probs=209.0
Q ss_pred CCCeEEEEecCCCCChhcHHHHHHHHHHcCceeeecceEeeeecCCCeee--eEecCHHHHHHHHHHHHcC---CCcCEE
Q 010240 19 KIPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTAGVQG--VNIVPEDFVAAQLKSVLSD---MQVDVV 93 (514)
Q Consensus 19 ~~~~vL~i~g~d~~ggag~~a~~~~l~~~g~~~~~~~t~~~~~n~~~~~~--~~~~~~~~~~~~l~~l~~~---~~~~~i 93 (514)
.|++||+|+|+|++||+|+++|+++++++|++++.++|+++++++ ++.. ...++++.+.++++.+.+. .++|+|
T Consensus 3 ~m~~vl~I~~~~~~G~~g~~a~~~~l~~~G~~~~~~~T~~~s~~t-~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~d~v 81 (289)
T 3pzs_A 3 AMKNILSIQSHVVFGHAGNSAAEFPMRRMGVNVWPLNTVQFSNHT-QYGHWTGCVMPASHLTDIVQGIADIDRLKDCDAV 81 (289)
T ss_dssp --CEEEEEEEEESSSCSTHHHHHHHHHHTTCEEEEEEEEEESSCG-GGSCCCEEECCHHHHHHHHHHHHHTTCGGGCCEE
T ss_pred CCCeEEEEecccCCCccchHHHHHHHHHcCCeEEEeeeEEcCCCC-CCCCcccccCCHHHHHHHHHHHHhcCCccCCCEE
Confidence 468999999999999999999999999999999999999988665 5543 3467888888888887654 379999
Q ss_pred EEcccCCHHHHHHHHHHHhcC---C-CCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCCCCC
Q 010240 94 KTGMLPSTDLVKVLLQSLSEF---P-VRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGGMQV 169 (514)
Q Consensus 94 ~~G~~~~~~~~~~~~~~~~~~---~-~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~~ 169 (514)
++|++++.+..+.+.+++++. + ..++|+||||++.++..+++++..+.+++.+++.+|+||||..|++.|+| .+.
T Consensus 82 ~~G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g-~~~ 160 (289)
T 3pzs_A 82 LSGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALPASDMIAPNLLELEQLSG-ERV 160 (289)
T ss_dssp EECCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHHHHCSEECCCHHHHHHHHT-SCC
T ss_pred EECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhhccCCEEeCCHHHHHHHhC-CCC
Confidence 999999988888887776543 2 23599999999988877888888888887799999999999999999998 666
Q ss_pred CCHHHHHHHHHHHHhcCCCeEEEeccc-CCCCCCceE-EEEeCCeEEEEeecccCC--CCCCCCcchHHHHHHHHHHcCC
Q 010240 170 VTVADMCSAAKLLHNLGPRTVLVKGGD-LPDSSDAVD-IFFDGEDFHELRSSRVNT--RNTHGTGCTLASCIAAELAKGS 245 (514)
Q Consensus 170 ~~~~~~~~~a~~l~~~g~~~Vvvt~g~-~g~~~~~~~-~~~~~~~~~~~~~~~~~~--~d~~GaGD~f~a~i~~~l~~g~ 245 (514)
.+.++..+++++|.++|++.|++|+++ .|..+.... +++++++.++++.++++. +|++|+||+|+|+|+++|++|+
T Consensus 161 ~~~~~~~~aa~~l~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dt~GaGD~f~a~~~~~l~~g~ 240 (289)
T 3pzs_A 161 ENVEQAVQVARSLCARGPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLVDFGKRQPVGVGDLTSGLLLVNLLKGE 240 (289)
T ss_dssp CSHHHHHHHHHHHHTTSCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECCCCTTSCCTTHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeeecCCCCCCCcHHHHHHHHHHHHHHCCC
Confidence 678889999999999999999999854 442122222 556667777788888776 8999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHhccccc
Q 010240 246 PMLSAVKVAKCFVETALDYSKDI 268 (514)
Q Consensus 246 ~l~~A~~~A~~~~~~~i~~~~~~ 268 (514)
++++|+++|+++++.+|+.+.+.
T Consensus 241 ~~~~A~~~A~~~~~~~i~~t~~~ 263 (289)
T 3pzs_A 241 PLDKALEHVTAAVYEVMLKTQEM 263 (289)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999998754
No 8
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=100.00 E-value=7.7e-36 Score=293.49 Aligned_cols=263 Identities=43% Similarity=0.658 Sum_probs=214.0
Q ss_pred CCCCeEEEEecCCCCChhcHHHHHHHHHHcCceeeecceEeeeecCCCeeeeEecCHHHHHHHHHHHHcCCCcCEEEEcc
Q 010240 18 MKIPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTAGVQGVNIVPEDFVAAQLKSVLSDMQVDVVKTGM 97 (514)
Q Consensus 18 ~~~~~vL~i~g~d~~ggag~~a~~~~l~~~g~~~~~~~t~~~~~n~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~i~~G~ 97 (514)
+++++||+|+|+|++||+|+++|+.+++.+|.++++++|+++.+|+..+..+..++++.+.++++.+++++++++|++|+
T Consensus 23 ~~~~~vl~i~G~D~~ggagi~a~~~~~~~~g~~g~~~it~~~~~n~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~G~ 102 (288)
T 1jxh_A 23 MQRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAENTCGVQSVYRIEPDFVAAQLDSVFSDVRIDTTKIGM 102 (288)
T ss_dssp CCCCEEEEEEECCTTSSSHHHHHHHHHHHTTCEEEEEEEEEEEEETTEEEEEEECCHHHHHHHHHHHHTTSCCSEEEECC
T ss_pred CCCCEEEEEeCcCCCchHHHHHHHHHHHHcCCEEeEEeeEEEeecCCCeeeeeeCCHHHHHHHHHHHHhCCCCCEEEECC
Confidence 56789999999999999999999999999999999999999988987777677888888888888887777789999999
Q ss_pred cCCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCCC-CCCCHHHHH
Q 010240 98 LPSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGGM-QVVTVADMC 176 (514)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~-~~~~~~~~~ 176 (514)
+.+.+.+..+++.+++.+.+++++||++++.+|..+++++..+.+.+.+++.+|+||||..|++.|+| . ...+.++..
T Consensus 103 l~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g-~~~~~~~~~~~ 181 (288)
T 1jxh_A 103 LAETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLD-APHARTEQEML 181 (288)
T ss_dssp CCSHHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHHT-CCCCCSHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHhhCcEEcCCHHHHHHHcC-CCCCCCHHHHH
Confidence 98888999999999987764599999999888877887766566665588999999999999999998 5 556677888
Q ss_pred HHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHHHcCCCHHHHHHHHHH
Q 010240 177 SAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELAKGSPMLSAVKVAKC 256 (514)
Q Consensus 177 ~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~~g~~l~~A~~~A~~ 256 (514)
+++++|.++|++.|++|+|..|.. ...++++++++.++++.++++++|++||||+|+|+|+++|++|+++++|+++|++
T Consensus 182 ~~a~~l~~~g~~~Vvvt~G~~G~~-~~~~~~~~~~~~~~~~~~~~~~vdttGAGD~f~a~~~a~l~~g~~~~~A~~~A~a 260 (288)
T 1jxh_A 182 AQGRALLAMGCEAVLMKGGHLEDA-QSPDWLFTREGEQRFSAPRVNTKNTHGTGCTLSAALAALRPRHRSWGETVNEAKA 260 (288)
T ss_dssp HHHHHHHHTTCSEEEEBC----------CEEECSSCEEEC---CCCCSCCBTHHHHHHHHHHHHGGGSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEeccCCCCC-ceeEEEEECCeEEEEeccccCCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 999999999999999999986621 1114566666677788888888899999999999999999999999999999999
Q ss_pred HHHHHHhcccccccCCCCCCCcccccc
Q 010240 257 FVETALDYSKDIVIGSGPQGPFDHLLR 283 (514)
Q Consensus 257 ~~~~~i~~~~~~~~g~g~~~~~~~~~~ 283 (514)
+++.+++.+.+...|.| .+|++++..
T Consensus 261 ~a~~~v~~~~~~~~g~g-~~~~~~~~~ 286 (288)
T 1jxh_A 261 WLSAALAQADTLEVGKG-IGPVHHFHA 286 (288)
T ss_dssp HHHHHHTTGGGCCCCSS-SCBCCTTTT
T ss_pred HHHHHHHhhccccCCCC-CCCCCcccc
Confidence 99999998865555777 678888643
No 9
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=100.00 E-value=3.8e-36 Score=296.20 Aligned_cols=245 Identities=22% Similarity=0.273 Sum_probs=197.2
Q ss_pred CCCCeEEEEecCCCCChhcHHHHHHHHHHcCceeeecceEeeeecCCCeeee--EecCHHHHHHHHHHHHcC-C--CcCE
Q 010240 18 MKIPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTAGVQGV--NIVPEDFVAAQLKSVLSD-M--QVDV 92 (514)
Q Consensus 18 ~~~~~vL~i~g~d~~ggag~~a~~~~l~~~g~~~~~~~t~~~~~n~~~~~~~--~~~~~~~~~~~l~~l~~~-~--~~~~ 92 (514)
|+.++||+|+|+|++|++|+.+|+++++++|++++.++|++++ |+.+|..+ ..++.+.+...++.+... . ++|+
T Consensus 1 m~~~~VLsI~~~~~~G~~G~~aa~~~l~~~G~~v~~~~T~~~S-nhtg~~~~~g~~~~~~ql~~~~~~~~~~~~~~~~da 79 (300)
T 3zs7_A 1 MSEKTVLSIQSFVTHGYVGNKAATFPLQLHGFDVDGINTVCLS-NHSGYPVIRGHRMSLQEYDELMEGVRANNFLSNYRY 79 (300)
T ss_dssp CCCCEEEEEEEEESSSSCHHHHHHHHHHHTTCEEEEEEEEEES-SCTTSSCCCEEECCHHHHHHHHHHHHHTTCGGGCSE
T ss_pred CCCCeEEEEeCccCCCcchHHHHHHHHHHcCCeeEEeeeEEec-CCCCCCCcCCCcCCHHHHHHHHHHHHhcCCcccCCE
Confidence 5678999999999999999999999999999999999999876 66677754 356666666666666443 2 6899
Q ss_pred EEEcccCCHHHHHHHHHHHhcCC---C-----CcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhh
Q 010240 93 VKTGMLPSTDLVKVLLQSLSEFP---V-----RALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALL 164 (514)
Q Consensus 93 i~~G~~~~~~~~~~~~~~~~~~~---~-----~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~ 164 (514)
|++||+++.+.++.+.+++++.+ . .++||||||++. |..|.+++..+.+++ +++.+|+||||..|++.|+
T Consensus 80 V~tG~l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~-G~~~~~~~~~~~~~~-Ll~~adiitPN~~Ea~~L~ 157 (300)
T 3zs7_A 80 ILTGYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDD-GIMYCKKEVLDAYRE-LVPLADIVTPNYFEASLLS 157 (300)
T ss_dssp EEECCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC----------CTHHHHHHH-HGGGCSEECCCHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccC-CCeecCHHHHHHHHH-HhhhCCEecCCHHHHHHHh
Confidence 99999999999999988887642 1 359999999977 778888888888886 9999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEe-C------CeEEEEeecccCCCCCCCCcchHHHHH
Q 010240 165 GGMQVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFD-G------EDFHELRSSRVNTRNTHGTGCTLASCI 237 (514)
Q Consensus 165 g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~-~------~~~~~~~~~~~~~~d~~GaGD~f~a~i 237 (514)
| .+..+.++..+++++|+++|++.|+||+|+.|+......+++. . ++.++++.++++. +++||||+|+|+|
T Consensus 158 g-~~~~~~~~~~~aa~~L~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~-~~~GtGD~fsaal 235 (300)
T 3zs7_A 158 G-VTVNDLSSAILAADWFHNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYHEG-RYTGTGDVFAACL 235 (300)
T ss_dssp S-SCCCSHHHHHHHHHHHHHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECCSS-CBTTHHHHHHHHH
T ss_pred C-CCCCCHHHHHHHHHHHHHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccCCC-CCcCHHHHHHHHH
Confidence 8 6667788899999999999999999999987633333334543 4 4677788888886 8999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHhccccc
Q 010240 238 AAELAKGSPMLSAVKVAKCFVETALDYSKDI 268 (514)
Q Consensus 238 ~~~l~~g~~l~~A~~~A~~~~~~~i~~~~~~ 268 (514)
++.| +|+++++|+++|..+++.+|+.+.+.
T Consensus 236 ~a~l-~g~~~~~Av~~A~~~v~~~i~~t~~~ 265 (300)
T 3zs7_A 236 LAFS-HSHPMDVAIGKSMAVLQELIIATRKE 265 (300)
T ss_dssp HHHH-TTSCHHHHHHHHHHHHHHHHHHTTC-
T ss_pred HHHH-cCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999 99999999999999999999999864
No 10
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=100.00 E-value=3.2e-36 Score=315.87 Aligned_cols=204 Identities=42% Similarity=0.629 Sum_probs=189.2
Q ss_pred CceEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCC
Q 010240 301 DLFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDAD 380 (514)
Q Consensus 301 ~~~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~ 380 (514)
++++|+|||+..+. ...++.+.+++++++|+++||||+|+.+..++.+++++++++|++++++|+|||++++|.++|||
T Consensus 9 ~~~lYlITd~~~~~-~~~~l~~~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~l~~l~~~~~v~liIND~~dlA~~~gAd 87 (540)
T 3nl6_A 9 DYSLYLVTDSGMIP-EGKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGAD 87 (540)
T ss_dssp CCSEEEEC-CTTCC-TTCCHHHHHHHHHHTTCSEEEECCSSSCTTHHHHHHHHHHHHHHHTTCCEEECSCSHHHHHTTCS
T ss_pred CCCEEEEECchhcc-CcchHHHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHHHHhcCCEEEEeCcHHHHHHcCCC
Confidence 57899999987643 13579999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeCCCCCCHHHHHhhcCCCcEEEEecCCHHHHHHhhhCC---CcEEEeccccCCCCCCCC--ccCCHHHHHHHHHc--
Q 010240 381 GVHLGQSDMPARTARALLGPDKIIGVSCKTPEEAHQAWIDG---ANYIGCGGVYPTNTKANN--LTVGLDGLKTVCLA-- 453 (514)
Q Consensus 381 gvhl~~~~~~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g---~d~v~~~~vf~t~~k~~~--~~~g~~~l~~~~~~-- 453 (514)
|||+++.+++...+|+.++++.++|+||||++|+++|.+.| +|||++||+|||.||++. +++|++.++++++.
T Consensus 88 GVHLgq~dl~~~~ar~~lg~~~iiG~S~ht~eea~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~ 167 (540)
T 3nl6_A 88 GIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALE 167 (540)
T ss_dssp EEEECTTSSCHHHHHHHHCTTSEEEEEECSHHHHHHHHHTCC--CCEEEESCCSCCCCCC----CCCHHHHHHHHHHHHH
T ss_pred EEEEChhhcCHHHHHHHhCCCCEEEEECCCHHHHHHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 999999999999999986 57899999988775
Q ss_pred ----CCCCEEEECCCCcccHHHHHH--------CCCCCCceEEEeecccCCCCHHHHHHHHHHHHHH
Q 010240 454 ----SKLPVVAIGGIGISNASDVMK--------IGVSNLKGVAVVSALFDRECILPESKKLHAVLMD 508 (514)
Q Consensus 454 ----~~~pv~a~GGi~~~~~~~~~~--------~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~ 508 (514)
.++||+|+|||+++|+.++++ +|++ |||++|+||+++||.+++++|++.+++
T Consensus 168 ~~~~~~iPvvAIGGI~~~ni~~v~~~~~~~g~~~Gad---gvAVvsaI~~a~dp~~a~~~l~~~~~~ 231 (540)
T 3nl6_A 168 RNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLD---GICVVSDIIASLDAAKSTKILRGLIDK 231 (540)
T ss_dssp HTTCTTCEEEEESSCCTTTHHHHHHHCBCTTSSCBCS---CEEESHHHHTCTTHHHHHHHHHHHHHC
T ss_pred hhccCCCCEEEEcCCCHHHHHHHHHhhcccccccCce---EEEEeHHHhcCCCHHHHHHHHHHHHHh
Confidence 489999999999999999998 8899 999999999999999999999999886
No 11
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=2.9e-33 Score=261.51 Aligned_cols=190 Identities=19% Similarity=0.220 Sum_probs=157.9
Q ss_pred ceEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCe
Q 010240 302 LFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADG 381 (514)
Q Consensus 302 ~~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~g 381 (514)
|++|+|||+..+. ...+.+++++++|+++||+|.|+.+.+++.++ ++++|+.+++.+++|+++++|.++|++|
T Consensus 1 m~ly~It~~~~~~----~~~~~~~~a~~~Gv~~v~lr~k~~~~~~~~~~---i~~l~~~~~~~livnd~~~~A~~~gadg 73 (210)
T 3ceu_A 1 MKLIVVTTPTFFV----EEDKIITALFEEGLDILHLRKPETPAMYSERL---LTLIPEKYHRRIVTHEHFYLKEEFNLMG 73 (210)
T ss_dssp CEEEEECCSSCCT----THHHHHHHHHHTTCCEEEECCSSCCHHHHHHH---HHHSCGGGGGGEEESSCTTHHHHTTCSE
T ss_pred CeEEEEeCccccc----CHHHHHHHHHHCCCCEEEEccCCCCHHHHHHH---HHHHHHHhCCeEEEeCCHHHHHHcCCCE
Confidence 5799999987653 23588999999999999999999888776664 4567888999999999999999999999
Q ss_pred EEeCCCCCCHHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCC-ccCCHHHHHHHHHc--CCCCE
Q 010240 382 VHLGQSDMPARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANN-LTVGLDGLKTVCLA--SKLPV 458 (514)
Q Consensus 382 vhl~~~~~~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~-~~~g~~~l~~~~~~--~~~pv 458 (514)
||+++.+.+.... .+.++|.||||++|+.+|. .|+||+++||+|||.+|++. ++.|++.++++++. .++||
T Consensus 74 vhl~~~~~~~~~~-----~~~~ig~s~~t~~e~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPv 147 (210)
T 3ceu_A 74 IHLNARNPSEPHD-----YAGHVSCSCHSVEEVKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKV 147 (210)
T ss_dssp EECCSSSCSCCTT-----CCSEEEEEECSHHHHHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTE
T ss_pred EEECccccccccc-----cCCEEEEecCCHHHHHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCE
Confidence 9999988753222 3789999999999999998 99999999999999999885 56899999999987 68999
Q ss_pred EEECCCCcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHH
Q 010240 459 VAIGGIGISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMD 508 (514)
Q Consensus 459 ~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~ 508 (514)
+|+|||+++|+.+++++|++ ||+++|+||+.+||.+. ++|++.+++
T Consensus 148 iaiGGI~~~nv~~~~~~Ga~---gVav~s~i~~~~d~~~~-~~~~~~v~~ 193 (210)
T 3ceu_A 148 MALGGINEDNLLEIKDFGFG---GAVVLGDLWNKFDACLD-QNYLAVIEH 193 (210)
T ss_dssp EEESSCCTTTHHHHHHTTCS---EEEESHHHHTTCCTTTS-SCCHHHHHH
T ss_pred EEECCCCHHHHHHHHHhCCC---EEEEhHHhHcCCCHHHH-HHHHHHHHH
Confidence 99999999999999999999 99999999999888655 555554444
No 12
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=99.97 E-value=6.8e-29 Score=243.47 Aligned_cols=248 Identities=21% Similarity=0.298 Sum_probs=193.6
Q ss_pred cCCCCCeEEEEecCCCCChhcHHHHHHHHHHcCceeeecceEeeeecCCCee--eeEecCHHHHHHHHHHHHcC-C--Cc
Q 010240 16 YKMKIPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTAGVQ--GVNIVPEDFVAAQLKSVLSD-M--QV 90 (514)
Q Consensus 16 ~k~~~~~vL~i~g~d~~ggag~~a~~~~l~~~g~~~~~~~t~~~~~n~~~~~--~~~~~~~~~~~~~l~~l~~~-~--~~ 90 (514)
|.| +++||+|+|++.+|++|..+++.+|+..|++...++|+++. +..++. ....++++.+..+++.+.+. . ++
T Consensus 12 ~~~-~~~vL~i~~~~~~g~~G~d~~~~~l~~~Gv~~~~v~t~i~~-~~~g~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 89 (283)
T 2ddm_A 12 RAL-QADIVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLS-NTPHYDTFYGGAIPDEWFSGYLRALQERDALRQL 89 (283)
T ss_dssp CSC-CCSEEEEEEEESSSSSTHHHHHHHHHHTTCCEEEEEEEEES-SCTTSSCCCEEECCHHHHHHHHHHHHHTTCCTTC
T ss_pred ccc-cCeEEEEecccCCCcchHHHHHHHHHHcCCeeeEEeEEEec-cCCCcCceeeeeCCHHHHHHHHHHHHhcCCcccC
Confidence 334 58999999999999999999999999999999999998765 434432 22467888888777777652 2 68
Q ss_pred CEEEEcccCCHHHHHHHHHH---Hhc--CCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhC
Q 010240 91 DVVKTGMLPSTDLVKVLLQS---LSE--FPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLG 165 (514)
Q Consensus 91 ~~i~~G~~~~~~~~~~~~~~---~~~--~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g 165 (514)
++|++|++.+.+..+.+.++ +++ .+. ++++||++++.++..+++++..+.+.+.+++++|++|||..|++.|+|
T Consensus 90 ~~v~~G~l~~~~~~~~~~~~l~~a~~~~~g~-~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g 168 (283)
T 2ddm_A 90 RAVTTGYMGTASQIKILAEWLTALRKDHPDL-LIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTG 168 (283)
T ss_dssp CEEEECCCSCHHHHHHHHHHHHHHHTTCTTC-EEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBHHHHHHHHT
T ss_pred CEEEECCcCCHHHHHHHHHHHHHHHhcCCCC-eEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCHHHHHHHhC
Confidence 99999998765544444444 444 344 599999999765556666665666666789999999999999999998
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCc-eEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHHHcC
Q 010240 166 GMQVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDA-VDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELAKG 244 (514)
Q Consensus 166 ~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~~g 244 (514)
....+.++..++++++.+.|++.|++|+|+.+.++.. .++++++++.++++.++++ +|++||||+|+|+|+++|++|
T Consensus 169 -~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v~-vdt~GAGDaf~a~~~~~l~~g 246 (283)
T 2ddm_A 169 -KNCRDLDSAIAAAKSLLSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRVK-TDLKGTGDLFCAQLISGLLKG 246 (283)
T ss_dssp -SCCSSHHHHHHHHHHHCCSSCCEEEEEC-------CEEEEEEEETTEEEEEEEECCC-CCCCCHHHHHHHHHHHHHHTT
T ss_pred -CCCCCHHHHHHHHHHHHHcCCCEEEEccccCccCCCceeEEEEeCCceEEEeeceeC-CCCCChHHHHHHHHHHHHHcC
Confidence 5555667888999999999999999999986211110 1567777777788888776 799999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhccccc
Q 010240 245 SPMLSAVKVAKCFVETALDYSKDI 268 (514)
Q Consensus 245 ~~l~~A~~~A~~~~~~~i~~~~~~ 268 (514)
+++++|+++|+++++.+++++...
T Consensus 247 ~~~~~A~~~A~a~a~~~v~~~~~~ 270 (283)
T 2ddm_A 247 KALTDAVHRAGLRVLEVMRYTQQH 270 (283)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999987654
No 13
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=99.96 E-value=5.8e-29 Score=234.74 Aligned_cols=200 Identities=26% Similarity=0.353 Sum_probs=171.4
Q ss_pred CceEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCC
Q 010240 301 DLFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDAD 380 (514)
Q Consensus 301 ~~~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~ 380 (514)
.+++|+|||+.++. +.+ +.+++++++|++++|+|.++.+..++.++++.+.+.+..++ .+++|++++++.++|+|
T Consensus 16 ~~~l~~It~~~~~~---~~l-~~~~~~~~~G~~~v~lr~~~~~~~~~~~~~~~l~~~~~~~~-~l~v~~~~~~a~~~gad 90 (221)
T 1yad_A 16 HMELHAITDDSKPV---EEL-ARIIITIQNEVDFIHIRERSKSAADILKLLDLIFEGGIDKR-KLVMNGRVDIALFSTIH 90 (221)
T ss_dssp -CEEEEECCSCSCH---HHH-HHHHHHHGGGCSEEEECCTTSCHHHHHHHHHHHHHTTCCGG-GEEEESCHHHHHTTTCC
T ss_pred CccEEEEECCCcCc---chH-HHHHHHHHCCCCEEEEccCCCCHHHHHHHHHHHHHhcCcCC-eEEEeChHHHHHHcCCC
Confidence 47999999987653 334 44888999999999999999999999999999988776655 89999999999999999
Q ss_pred eEEeCCCCCCHHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEE
Q 010240 381 GVHLGQSDMPARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVA 460 (514)
Q Consensus 381 gvhl~~~~~~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a 460 (514)
+||+++.+.....+++..+ +.++|+++||++|+.++.+.|+|||+++++|+|.++++.++.+++.++++++..++||++
T Consensus 91 ~v~l~~~~~~~~~~~~~~~-~~~ig~sv~t~~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~~~pvia 169 (221)
T 1yad_A 91 RVQLPSGSFSPKQIRARFP-HLHIGRSVHSLEEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRISIPVIA 169 (221)
T ss_dssp EEEECTTSCCHHHHHHHCT-TCEEEEEECSHHHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHCCSCEEE
T ss_pred EEEeCCCccCHHHHHHHCC-CCEEEEEcCCHHHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhCCCCEEE
Confidence 9999998877778887765 889999999999999999999999999999999999876678999999999888999999
Q ss_pred ECCCCcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 461 IGGIGISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 461 ~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
+|||+++|+.+++++|++ ||++||+||.++||.+.+++|++.+++.
T Consensus 170 ~GGI~~~nv~~~~~~Ga~---gv~vgs~i~~~~d~~~~~~~~~~~~~~~ 215 (221)
T 1yad_A 170 IGGMTPDRLRDVKQAGAD---GIAVMSGIFSSAEPLEAARRYSRKLKEM 215 (221)
T ss_dssp ESSCCGGGHHHHHHTTCS---EEEESHHHHTSSSHHHHHHHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHcCCC---EEEEhHHhhCCCCHHHHHHHHHHHHHHh
Confidence 999999999999999999 9999999999999999999999988764
No 14
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=99.96 E-value=5.1e-28 Score=229.39 Aligned_cols=201 Identities=37% Similarity=0.582 Sum_probs=181.1
Q ss_pred ceEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCCCHHHH---HHHHHHHHHHHhhcCceEEEcCcHHHHHhCC
Q 010240 302 LFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDADTRGF---LEAAKACLQICCVHGVPLLINDRIDIALACD 378 (514)
Q Consensus 302 ~~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~---~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~g 378 (514)
+++|.||++..+. +...+.+++++++|++++++|.++.++.++ .++++.+.+++..++++++++++++.+.++|
T Consensus 18 ~~i~~It~~~~~~---~~~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~v~v~~~~~~a~~~g 94 (227)
T 2tps_A 18 LSVYFIMGSNNTK---ADPVTVVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACREAGVPFIVNDDVELALNLK 94 (227)
T ss_dssp TTEEEEECGGGCS---SCHHHHHHHHHHHTCSEEEECCCSTTCCCHHHHHHHHHHHHHHHHHHTCCEEEESCHHHHHHHT
T ss_pred CCEEEEECCcccc---chHHHHHHHHHHCCCCEEEEecCCCCHhHHHHHHHHHHHHHHHHHHcCCeEEEcCHHHHHHHcC
Confidence 6899999987653 238888999999999999999998887777 7888888888988999999999999999999
Q ss_pred CCeEEeCCCCCCHHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCC-CccCCHHHHHHHHHcCC-C
Q 010240 379 ADGVHLGQSDMPARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKAN-NLTVGLDGLKTVCLASK-L 456 (514)
Q Consensus 379 a~gvhl~~~~~~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~-~~~~g~~~l~~~~~~~~-~ 456 (514)
++++|++..+.+...+++.++. .++|+++||++|+..+.+.|+||+++||+|+|.++++ ..+.+++.++++++.++ +
T Consensus 95 ad~v~l~~~~~~~~~~~~~~g~-~~~~~s~~t~~e~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~~~ 173 (227)
T 2tps_A 95 ADGIHIGQEDANAKEVRAAIGD-MILGVSAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGISI 173 (227)
T ss_dssp CSEEEECTTSSCHHHHHHHHTT-SEEEEEECSHHHHHHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTTCCC
T ss_pred CCEEEECCCccCHHHHHHhcCC-cEEEEecCCHHHHHHHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhCCCC
Confidence 9999999888777677766666 8999999999999999999999999999999999987 56789999999998887 9
Q ss_pred CEEEECCCCcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 457 PVVAIGGIGISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 457 pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
||++.|||+++|+.+++++|++ ||++||+|+..+||.+.+++|++.+++.
T Consensus 174 pvia~GGI~~~nv~~~~~~Ga~---gv~vgs~i~~~~d~~~~~~~~~~~~~~~ 223 (227)
T 2tps_A 174 PIVGIGGITIDNAAPVIQAGAD---GVSMISAISQAEDPESAARKFREEIQTY 223 (227)
T ss_dssp CEEEESSCCTTTSHHHHHTTCS---EEEESHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred CEEEEcCCCHHHHHHHHHcCCC---EEEEhHHhhcCCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999 9999999999999999999999888764
No 15
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=99.95 E-value=5e-27 Score=220.59 Aligned_cols=199 Identities=43% Similarity=0.684 Sum_probs=178.6
Q ss_pred ceEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCe
Q 010240 302 LFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADG 381 (514)
Q Consensus 302 ~~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~g 381 (514)
+++|+|||+. +. +..+.++++.++|++++++|.+..+..+..+.++++.+++..++++++++++++.+.++|+++
T Consensus 15 ~~l~~It~~~-~~----~~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~~~v~v~v~~~~~~a~~~gad~ 89 (215)
T 1xi3_A 15 LKLYVITDRR-LK----PEVESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREYDALFFVDDRVDVALAVDADG 89 (215)
T ss_dssp TSEEEECCTT-TS----CHHHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHTTCEEEEESCHHHHHHHTCSE
T ss_pred CCEEEEECCc-hh----hHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHcCCeEEEcChHHHHHHcCCCE
Confidence 5799999986 42 788899999999999999999999988888899999999988999999999999999999999
Q ss_pred EEeCCCCCCHHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEE
Q 010240 382 VHLGQSDMPARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAI 461 (514)
Q Consensus 382 vhl~~~~~~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~ 461 (514)
||++..+.+....++.. .+.++|+++||++|+..+.+.|+||++++++|+|.++++..+.+++.++++++..++|+++.
T Consensus 90 v~l~~~~~~~~~~~~~~-~~~~~~v~~~t~~e~~~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~pvia~ 168 (215)
T 1xi3_A 90 VQLGPEDMPIEVAKEIA-PNLIIGASVYSLEEALEAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESVKIPVVAI 168 (215)
T ss_dssp EEECTTSCCHHHHHHHC-TTSEEEEEESSHHHHHHHHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHCSSCEEEE
T ss_pred EEECCccCCHHHHHHhC-CCCEEEEecCCHHHHHHHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhCCCCEEEE
Confidence 99998887777777766 68899999999999999999999999999999999888766788999999998889999999
Q ss_pred CCCCcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 462 GGIGISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 462 GGi~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
|||+++|+.+++++|++ ||++||+|+..+||.+.+++|++.+++.
T Consensus 169 GGI~~~nv~~~~~~Ga~---gv~vgs~i~~~~d~~~~~~~~~~~~~~~ 213 (215)
T 1xi3_A 169 GGINKDNAREVLKTGVD---GIAVISAVMGAEDVRKATEELRKIVEEV 213 (215)
T ss_dssp SSCCTTTHHHHHTTTCS---EEEESHHHHTSSSHHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHcCCC---EEEEhHHHhCCCCHHHHHHHHHHHHhhc
Confidence 99999999999999999 9999999999999999999999888764
No 16
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=99.95 E-value=2.8e-29 Score=246.91 Aligned_cols=228 Identities=18% Similarity=0.146 Sum_probs=167.1
Q ss_pred ccccccccccccccCCCCCeEEEEecCCCCChhcHHHHHHHHHHcCceeeecceEeeeecCCCeeeeEecCHHHHH----
Q 010240 3 DDCGAASATTTEQYKMKIPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTAGVQGVNIVPEDFVA---- 78 (514)
Q Consensus 3 ~~~~~~~~r~~~~~k~~~~~vL~i~g~d~~ggag~~a~~~~l~~~g~~~~~~~t~~~~~n~~~~~~~~~~~~~~~~---- 78 (514)
|+..+.|+|..++||+++|+||+|+|||+|+||++++|++++++ |++++|+++.+|+... +...+++.+.
T Consensus 41 ~~~~~lp~r~~~~hKg~~G~vlvIaGsd~~~GAgilA~~aal~~----Gaglvt~~t~q~~~~~--v~~~~pe~~~~~~~ 114 (311)
T 3bgk_A 41 LTKKIIKPRPLNSHKGTFGRVLLIGGNYPYGGAIIMAALACVNS----GAGLVTVATHKDNITA--LHSHLPEAMAFDMV 114 (311)
T ss_dssp HHHHHSCCCCSSCCSSTTCEEEEECCCTTCHHHHHHHHHHHHHT----TCSEEEEEECGGGHHH--HHHHCTTSEEEETT
T ss_pred HHHhhCCCCCCCCCCccCCEEEEEECCCCCCCHHHHHHHHHHHh----CcCeEEEEEChhhHhH--HhhCChhHheeccc
Confidence 34456899999999999999999999999999999999999998 7888999988886431 1111122111
Q ss_pred --HHHHHHHcCCCcCEEEEcc-cC-CHHHHHHHHHHHhcCC-CCcEEEecceecCCCCCCCChhHHHHHHH--hh-c-cc
Q 010240 79 --AQLKSVLSDMQVDVVKTGM-LP-STDLVKVLLQSLSEFP-VRALVVDPVMVSTSGDVLAGPSTITGLRE--NL-L-PM 149 (514)
Q Consensus 79 --~~l~~l~~~~~~~~i~~G~-~~-~~~~~~~~~~~~~~~~-~~~ivlDPv~~~~~g~~~~~~~~~~~l~~--~l-l-~~ 149 (514)
++++.+++ +++++++|+ +. +.+..+.+.++++... ..|+|+||. ....+.. .+ + +.
T Consensus 115 ~~~ql~~~~~--~~dav~IG~Gl~~~~~~~~~v~~~l~~~~~~~pvVlDa~-------------g~~ll~~~~~l~L~~~ 179 (311)
T 3bgk_A 115 EKDRLSEQIT--AADVVLMGPGLAEDDLAQTTFDVVWQAIEPKQTLIIDGS-------------AINLLAKRKPAIWPTK 179 (311)
T ss_dssp CHHHHHHHHH--HCSEEEECTTCCSSHHHHHHHHHHHHHCCTTSEEEEETH-------------HHHHHHHCC-CCCSCS
T ss_pred cHHHHHHHhc--cCCEEEEcCCCCCCHHHHHHHHHHHHHcCCCCeEEEeCC-------------hhhhhccChhhcCCCC
Confidence 45555554 478888887 33 6677777777777653 346999972 1122211 11 3 57
Q ss_pred ceEEcCCHHHHHHhhCCCCCCCH-HHH-HHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCC
Q 010240 150 ADIVTPNVKEASALLGGMQVVTV-ADM-CSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTH 227 (514)
Q Consensus 150 ~diitpN~~E~~~L~g~~~~~~~-~~~-~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 227 (514)
++|||||..|+++|+| ....+. ++. .+++++|.+ + ..|++||++ +++++ ++.++++..+++.++++
T Consensus 180 ~~viTPN~~E~~~L~g-~~~~~~~~d~~~~aa~~l~~-g-~~VvlkG~~--------~~i~~-~~~~~~~~~~~~~~~t~ 247 (311)
T 3bgk_A 180 QIILTPHQKEWERLSG-LTIPEQIEAATQTALAHFPK-E-TILVAKSHQ--------TKIYQ-GQKIGHIQVGGPYQATG 247 (311)
T ss_dssp CEEEECCSCC-CTTTC-CCSTTCCHHHHHHHHTTSCT-T-CEEEECSSS--------CEEEE-TTEEEEECCCCGGGCST
T ss_pred CEEECCcHHHHHHHhC-CCCCcchhhHHHHHHHHHhc-C-CEEEEeCCC--------eEEEE-CCEEEEECCCCCCCCCC
Confidence 8999999999999998 444333 566 788888877 4 578888866 67777 44455666777778999
Q ss_pred CCcchHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHh
Q 010240 228 GTGCTLASCIAAELAK-GSPMLSAVKVAKCFVETALD 263 (514)
Q Consensus 228 GaGD~f~a~i~~~l~~-g~~l~~A~~~A~~~~~~~i~ 263 (514)
|+||+|+|+++++|++ |.++.+|+..|+.+...+-+
T Consensus 248 GtGD~Lag~iaa~lA~~g~~~~eA~~~A~~~~~~ag~ 284 (311)
T 3bgk_A 248 GMGDTLAGMIAGFVAQFHTDRFEVAAAAVFLHSYIAD 284 (311)
T ss_dssp THHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 99999999999554444433
No 17
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=99.95 E-value=1.1e-28 Score=242.44 Aligned_cols=226 Identities=21% Similarity=0.203 Sum_probs=164.4
Q ss_pred ccccccccccccccCCCCCeEEEEecCCCCChhcHHHHHHHHHHcCceeeecceEeeeecCCCeeeeEecCHHHHH----
Q 010240 3 DDCGAASATTTEQYKMKIPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTAGVQGVNIVPEDFVA---- 78 (514)
Q Consensus 3 ~~~~~~~~r~~~~~k~~~~~vL~i~g~d~~ggag~~a~~~~l~~~g~~~~~~~t~~~~~n~~~~~~~~~~~~~~~~---- 78 (514)
++..+.|+|..++||+++|+||+|+|||+|+||++++|++++++ |++++|+++.+|+... +...+++.+.
T Consensus 27 ~~~~~lp~r~~~~hKg~~G~vlvIaGsd~~~GA~ilA~~aal~~----Gaglvt~~t~~~~~~~--v~~~~pe~~~~~~~ 100 (310)
T 2r3b_A 27 ILEEVITQRPSDSYKSNFGRVVLIGGNRQYGGAIIMSTEACINS----GAGLTTVITDVKNHGP--LHARCPEAMVVGFE 100 (310)
T ss_dssp HHHHHCBCCCTTCCGGGGCEEEEECCCSSSHHHHHHHHHHHHHH----TCSEEEEECCGGGHHH--HHHHCTTCEEECTT
T ss_pred HHHhhCCCCCCCCCCCcCCEEEEEECCCCCCcHHHHHHHHHHHh----CcCcEEEEEChhhHhH--HhhCChhheEecCC
Confidence 34456899999999999999999999999999999999999998 8888999988876431 1111122111
Q ss_pred --HHHHHHHcCCCcCEEEEcc-c-CCHHHHHHHHHHHhcCC-CCcEEEecceecCCCCCCCChhHHHHHHH--hhc--cc
Q 010240 79 --AQLKSVLSDMQVDVVKTGM-L-PSTDLVKVLLQSLSEFP-VRALVVDPVMVSTSGDVLAGPSTITGLRE--NLL--PM 149 (514)
Q Consensus 79 --~~l~~l~~~~~~~~i~~G~-~-~~~~~~~~~~~~~~~~~-~~~ivlDPv~~~~~g~~~~~~~~~~~l~~--~ll--~~ 149 (514)
++++.+++ +++++++|+ + .+.+..+.+.++++... ..|+|+||. ....+.. .++ +.
T Consensus 101 ~~~ql~~~~~--~~dav~IG~Gl~~~~~~~~~v~~~l~~~~~~~pvVlDa~-------------g~~ll~~~~~~l~~~~ 165 (310)
T 2r3b_A 101 ETVLLTNVVE--QADVILIGPGLGLDATAQQILKMVLAQHQKQQWLIIDGS-------------AITLFSQGNFSLTYPE 165 (310)
T ss_dssp CHHHHHHHHH--HCSEEEECTTCCSSHHHHHHHHHHHHHCCTTCEEEEETH-------------HHHHHHHTTCCCSSGG
T ss_pred cHHHHHHHhc--cCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCCcEEEcCC-------------cchhcccchhhhcCCC
Confidence 45666555 478888887 3 36677777777777652 346999972 1111111 122 46
Q ss_pred ceEEcCCHHHHHHhhCCCCCCCH-HHH-HHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCC
Q 010240 150 ADIVTPNVKEASALLGGMQVVTV-ADM-CSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTH 227 (514)
Q Consensus 150 ~diitpN~~E~~~L~g~~~~~~~-~~~-~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 227 (514)
++|||||..|+++|+| .+..+. ++. .++++++ + ..|++||++ +++++ ++.++++..+++.++++
T Consensus 166 ~~viTPN~~E~~~L~g-~~~~~~~~~~a~~aA~~l---g-~~VvlKG~~--------~vi~~-~~~~~~~~~g~~~~~t~ 231 (310)
T 2r3b_A 166 KVVFTPHQMEWQRLSH-LPIEQQTLANNQRQQAKL---G-STIVLKSHR--------TTIFH-AGEPFQNTGGNPGMATG 231 (310)
T ss_dssp GEEEECCHHHHHHHHC-CCGGGCCHHHHHHHHHHH---T-SEEEECSTT--------CEEEC-SSSCEECCCCCGGGCST
T ss_pred CEEEcCCHHHHHHHhC-CCCCcccchHHHHHHHHh---C-cEEEEeCCc--------eEEEE-CCEEEEECCCCCCCCCC
Confidence 7899999999999998 433322 355 7777777 4 478888866 67776 43345566677778999
Q ss_pred CCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHh
Q 010240 228 GTGCTLASCIAAELAKGSPMLSAVKVAKCFVETALD 263 (514)
Q Consensus 228 GaGD~f~a~i~~~l~~g~~l~~A~~~A~~~~~~~i~ 263 (514)
|+||+|+|+++++|++|.++.+|+..|+.+...+-+
T Consensus 232 GtGD~Lag~Iaa~lA~g~~~~eA~~~A~~~~~~ag~ 267 (310)
T 2r3b_A 232 GTGDTLAGIIAGFLAQFKPTIETIAGAVYLHSLIGD 267 (310)
T ss_dssp THHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999554444433
No 18
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=99.94 E-value=1.1e-24 Score=216.43 Aligned_cols=262 Identities=22% Similarity=0.291 Sum_probs=193.7
Q ss_pred CCeEEEEecCCCCChhcHHHHHHHHHHcCceeeecceEeeeecCCCee--eeEecCHHHHHHHHHHHHcC-C-CcCEEEE
Q 010240 20 IPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTAGVQ--GVNIVPEDFVAAQLKSVLSD-M-QVDVVKT 95 (514)
Q Consensus 20 ~~~vL~i~g~d~~ggag~~a~~~~l~~~g~~~~~~~t~~~~~n~~~~~--~~~~~~~~~~~~~l~~l~~~-~-~~~~i~~ 95 (514)
.++||+|.+++..|.+|.-.....|+..|+....+.+.... +..++. .-..++++.+...++.+... + +++++++
T Consensus 4 ~~~vl~i~~~~~~g~vG~D~g~~iL~~~GV~~~~v~~~~~~-~~t~~~~~~g~~l~~~~i~~~~~~~~~~~~~~~~~v~~ 82 (312)
T 2yxt_A 4 ECRVLSIQSHVIRGYVGNRAATFPLQVLGFEIDAVNSVQFS-NHTGYAHWKGQVLNSDELQELYEGLRLNNMNKYDYVLT 82 (312)
T ss_dssp CCEEEEEEEEESSSCSTHHHHHHHHHHTTCEEEEEEEEEES-SCTTSSCCCEEECCHHHHHHHHHHHHHTTCCCCSEEEE
T ss_pred CCeEEEEecccCCCccchHhhHHHHHHcCCeEEEEEEEEec-CCCCcCCccCccCCHHHHHHHHHHHHhcCCccCCEEEE
Confidence 47899999999999999987777799999988777665323 333322 12356777666655554332 3 5889999
Q ss_pred cccCCHHHHH---HHHHHHhcCCCC-cEEEecceecC---CCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCCCC
Q 010240 96 GMLPSTDLVK---VLLQSLSEFPVR-ALVVDPVMVST---SGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGGMQ 168 (514)
Q Consensus 96 G~~~~~~~~~---~~~~~~~~~~~~-~ivlDPv~~~~---~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~ 168 (514)
|++.+.+..+ .+++.+++.+.. ++++|||+++. +|..+..++..+.+++.+++++|+++||..|++.|+| ..
T Consensus 83 G~~~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g-~~ 161 (312)
T 2yxt_A 83 GYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVPLADIITPNQFEAELLSG-RK 161 (312)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGGGCSEECCCHHHHHHHHS-CC
T ss_pred CCCCCHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhhhCCEEcCCHHHHHHHhC-CC
Confidence 9998755555 555556555432 48999999976 5655555555566665589999999999999999998 55
Q ss_pred CCCHHHHHHHHHHHHhcCCCeEEEecccCCCC-CCceEEEE-------eC-C----eEEEEeecccCCCCCCCCcchHHH
Q 010240 169 VVTVADMCSAAKLLHNLGPRTVLVKGGDLPDS-SDAVDIFF-------DG-E----DFHELRSSRVNTRNTHGTGCTLAS 235 (514)
Q Consensus 169 ~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~-~~~~~~~~-------~~-~----~~~~~~~~~~~~~d~~GaGD~f~a 235 (514)
..+.++..+++++|.++|++.|+||+|+.|.. ..+ ++++ ++ + +.++++.+++++ ||+||||+|+|
T Consensus 162 ~~~~~~~~~~~~~l~~~g~~~VvvT~G~~g~~~~~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v-dttGAGDaf~a 239 (312)
T 2yxt_A 162 IHSQEEALRVMDMLHSMGPDTVVITSSDLPSPQGSN-YLIVLGSQRRRNPAGSVVMERIRMDIRKVDA-VFVGTGDLFAA 239 (312)
T ss_dssp CCSHHHHHHHHHHHHHHSCSEEEECCCSCCCTTCTT-EEEEEEEEEC----CCCCEEEEEEEEECCSS-CCSSHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCCc-eEEEEEeccccccccccccceEEEeecccCC-CCCCchHHHHH
Confidence 56677888999999999999999999886411 112 3333 33 2 567788888886 99999999999
Q ss_pred HHHHHHHc-CCCHHHHHHHHHHHHHHHHhcccccc---cCCCCCCCccccccccc
Q 010240 236 CIAAELAK-GSPMLSAVKVAKCFVETALDYSKDIV---IGSGPQGPFDHLLRLKS 286 (514)
Q Consensus 236 ~i~~~l~~-g~~l~~A~~~A~~~~~~~i~~~~~~~---~g~g~~~~~~~~~~~~~ 286 (514)
+|+++|++ |+++++|+++|+++++.+++.+.... .|.| .+|+++..+++.
T Consensus 240 ~~~~~l~~~g~~l~~a~~~A~a~a~~~v~~~~~~~~~~~~~~-~~~~~~~~el~~ 293 (312)
T 2yxt_A 240 MLLAWTHKHPNNLKVACEKTVSTLHHVLQRTIQCAKAQAGEG-VRPSPMQLELRM 293 (312)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHSCTT-CCCCTTTTSCCC
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhcccccccC-CCccccchhhhh
Confidence 99999998 99999999999999999998876532 2455 567776555543
No 19
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=99.92 E-value=1.6e-25 Score=207.54 Aligned_cols=184 Identities=15% Similarity=0.107 Sum_probs=156.1
Q ss_pred ceEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCe
Q 010240 302 LFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADG 381 (514)
Q Consensus 302 ~~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~g 381 (514)
.+++.|.+... .+++.+.+++++++|++++|+|.++.+..+.++.+++ ..+|..+|. +++++++++|.+.||+|
T Consensus 13 ~~ii~vi~~~~----~~~~~~~~~~l~~gGv~~iel~~k~~~~~~~i~~~~~-~~~~~gag~-vl~~d~~~~A~~~GAd~ 86 (207)
T 2yw3_A 13 SRLLPLLTVRG----GEDLLGLARVLEEEGVGALEITLRTEKGLEALKALRK-SGLLLGAGT-VRSPKEAEAALEAGAAF 86 (207)
T ss_dssp HCEEEEECCCS----CCCHHHHHHHHHHTTCCEEEEECSSTHHHHHHHHHTT-SSCEEEEES-CCSHHHHHHHHHHTCSE
T ss_pred CCEEEEEeCCC----HHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHhC-CCCEEEeCe-EeeHHHHHHHHHcCCCE
Confidence 46777776543 3678999999999999999999999988887777777 666766777 66889999999999999
Q ss_pred EEeCCCCCCHHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccC-CHHHHHHHHHcC-CCCEE
Q 010240 382 VHLGQSDMPARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTV-GLDGLKTVCLAS-KLPVV 459 (514)
Q Consensus 382 vhl~~~~~~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~-g~~~l~~~~~~~-~~pv~ 459 (514)
+|+|+.+.+....++..+...++| |||++|+.+|.+.|+||+.+ || .... |+++++.++..+ ++|++
T Consensus 87 v~~~~~d~~v~~~~~~~g~~~i~G--~~t~~e~~~A~~~Gad~v~~---fp------a~~~gG~~~lk~l~~~~~~ipvv 155 (207)
T 2yw3_A 87 LVSPGLLEEVAALAQARGVPYLPG--VLTPTEVERALALGLSALKF---FP------AEPFQGVRVLRAYAEVFPEVRFL 155 (207)
T ss_dssp EEESSCCHHHHHHHHHHTCCEEEE--ECSHHHHHHHHHTTCCEEEE---TT------TTTTTHHHHHHHHHHHCTTCEEE
T ss_pred EEcCCCCHHHHHHHHHhCCCEEec--CCCHHHHHHHHHCCCCEEEE---ec------CccccCHHHHHHHHhhCCCCcEE
Confidence 999998877766676777777877 99999999999999999955 77 2334 889999999988 89999
Q ss_pred EECCCCcccHHHHHHCCCCCCceEEEeecccCCCC---HHHHHHHHHHHH
Q 010240 460 AIGGIGISNASDVMKIGVSNLKGVAVVSALFDREC---ILPESKKLHAVL 506 (514)
Q Consensus 460 a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~---~~~~~~~~~~~~ 506 (514)
|+|||+++|+.+++++|++ +++++|+|+. +| +.+.++++.+.+
T Consensus 156 aiGGI~~~n~~~~l~aGa~---~vavgSai~~-~d~~~i~~~a~~~~~~~ 201 (207)
T 2yw3_A 156 PTGGIKEEHLPHYAALPNL---LAVGGSWLLQ-GNLEAVRAKVRAAKALL 201 (207)
T ss_dssp EBSSCCGGGHHHHHTCSSB---SCEEESGGGS-SCHHHHHHHHHHHHHHC
T ss_pred EeCCCCHHHHHHHHhCCCc---EEEEehhhhC-CCHHHHHHHHHHHHHHh
Confidence 9999999999999999999 9999999998 77 566666666554
No 20
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=99.92 E-value=2.4e-25 Score=214.82 Aligned_cols=226 Identities=18% Similarity=0.093 Sum_probs=159.7
Q ss_pred ccccccccccccccCCCCCeEEEEecCCCCChhcHHHHHHHHHHcCceeeecceEeeeecCC-----CeeeeEecCHHHH
Q 010240 3 DDCGAASATTTEQYKMKIPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTA-----GVQGVNIVPEDFV 77 (514)
Q Consensus 3 ~~~~~~~~r~~~~~k~~~~~vL~i~g~d~~ggag~~a~~~~l~~~g~~~~~~~t~~~~~n~~-----~~~~~~~~~~~~~ 77 (514)
+++...|+|..++||+++|+||+|+||..|.||++++...++++ |++++++.+.+... ..++....+...+
T Consensus 13 ~~~~~lp~r~~~~hKg~~G~vlvigGs~~~~GA~~laa~aAlr~----GaGlv~~~~~~~~~~~~~~~~Pe~m~~~~~~~ 88 (279)
T 3rpz_A 13 HVRATLPERDAESHKGTYGTALLLAGSDDMPGAALLAGLGAMRS----GLGKLVIGTSENVIPLIVPVLPEATYWRDGWK 88 (279)
T ss_dssp HHHHHCCCCCSSCCGGGGCEEEEECCBTTBCHHHHHHHHHHHTT----TCSEEEEEECTTTHHHHTTTCTTCEEEETHHH
T ss_pred HHHhhCCCCCCcCCCcCCCEEEEEeCCCCCCcHHHHHHHHHHHh----CCCeEEEEecHHHHHHHHhcCCeeEEcccccc
Confidence 45667899999999999999999999999999999999999999 88888876644321 1112111111111
Q ss_pred HHHHHHHHcCCCcCEEEEcccCC-HHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCC
Q 010240 78 AAQLKSVLSDMQVDVVKTGMLPS-TDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPN 156 (514)
Q Consensus 78 ~~~l~~l~~~~~~~~i~~G~~~~-~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN 156 (514)
......++ .++|++++|.... .+....+++.+.+... |+|+|+ ++..+ . .+ ......+|||||
T Consensus 89 ~~~~~~~l--~~~davviGPGlg~~~~~~~~~~~~l~~~~-p~VlDA-----dal~~--~----~l--~~~~~~~vlTPN 152 (279)
T 3rpz_A 89 KAADAQLE--ETYRAIAIGPGLPQTESVQQAVDHVLTADC-PVILDA-----GALAK--R----TY--PKREGPVILTPH 152 (279)
T ss_dssp HTTTSCCS--SCCSEEEECTTCCCCHHHHHHHHHHTTSSS-CEEECG-----GGCCS--C----CC--CCCSSCEEECCC
T ss_pred chhhHhhc--cCCCEEEECCCCCCCHHHHHHHHHHHhhCC-CEEEEC-----Cccch--h----hh--hhccCCEEEecC
Confidence 11111111 2578888877532 2333444455544454 599994 44333 0 00 112456899999
Q ss_pred HHHHHHhhCCCCCCCH-HHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHH
Q 010240 157 VKEASALLGGMQVVTV-ADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLAS 235 (514)
Q Consensus 157 ~~E~~~L~g~~~~~~~-~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a 235 (514)
..|+++|+| .+..+. ++..++++++.+++...|++||+. ++++++++.++++..+.+.++++|+||+|+|
T Consensus 153 ~~E~~~L~g-~~~~~~~~d~~~aa~~la~~~~~~VvlKG~~--------~vi~~~~g~~~~~~~g~~~~at~GtGD~Lag 223 (279)
T 3rpz_A 153 PGEFFRMTG-VPVNELQKKRAEYAKEWAAQLQTVIVLKGNQ--------TVIAFPDGDCWLNPTGNGALAKGGTGDTLTG 223 (279)
T ss_dssp HHHHHHHHC-CCHHHHTTSHHHHHHHHHHHHTSEEEECSTT--------CEEECTTSCEEECCCCCGGGCSTTHHHHHHH
T ss_pred HHHHHHHhC-CCccchHHHHHHHHHHHHHHcCeEEEEeCCC--------cEEECCCceEEEeCCCCCCCCCCChHHHHHH
Confidence 999999998 443222 456778888887666688999876 7888877666677777777899999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHH
Q 010240 236 CIAAELAKGSPMLSAVKVAKCF 257 (514)
Q Consensus 236 ~i~~~l~~g~~l~~A~~~A~~~ 257 (514)
+++++|++|.++.+|+..|+..
T Consensus 224 ~iaa~lA~g~~~~~A~~~a~~l 245 (279)
T 3rpz_A 224 MILGMLCCHEDPKHAVLNAVYL 245 (279)
T ss_dssp HHHHHHHHCSSHHHHHHHHHHH
T ss_pred HHHHHHHCCCCHHHHHHHHHHH
Confidence 9999999999999999998643
No 21
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=99.91 E-value=1.7e-24 Score=201.24 Aligned_cols=172 Identities=16% Similarity=0.101 Sum_probs=142.1
Q ss_pred ceEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHH-HHHHHHHHHhhcCceEEEcCcHHHHHhCCCC
Q 010240 302 LFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDADTRGFLE-AAKACLQICCVHGVPLLINDRIDIALACDAD 380 (514)
Q Consensus 302 ~~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~-~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~ 380 (514)
.++..|.+... .++..+.+++++++|++++|+|.++.+..+.++ +.+++..++..+|. ++++++++.|.++|||
T Consensus 16 ~~~i~v~r~~~----~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~vgagt-vi~~d~~~~A~~aGAd 90 (214)
T 1wbh_A 16 GPVVPVIVVKK----LEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIVGAGT-VLNPQQLAEVTEAGAQ 90 (214)
T ss_dssp CSEEEEECCSS----GGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCTTSEEEEES-CCSHHHHHHHHHHTCS
T ss_pred CCEEEEEECCC----HHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCcCCEEeeCE-EEEHHHHHHHHHcCCC
Confidence 45667666542 257899999999999999999999988776544 23333333334444 6778999999999999
Q ss_pred eEEeCCCCCCHHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccC-CHHHHHHHHHcC-CCCE
Q 010240 381 GVHLGQSDMPARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTV-GLDGLKTVCLAS-KLPV 458 (514)
Q Consensus 381 gvhl~~~~~~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~-g~~~l~~~~~~~-~~pv 458 (514)
|+|+|+.+.+....++.++.+.++| |||++|+.+|.+.|+||+.+ || .... |+++++++++.+ ++|+
T Consensus 91 ~v~~p~~d~~v~~~~~~~g~~~i~G--~~t~~e~~~A~~~Gad~v~~---Fp------a~~~gG~~~lk~i~~~~~~ipv 159 (214)
T 1wbh_A 91 FAISPGLTEPLLKAATEGTIPLIPG--ISTVSELMLGMDYGLKEFKF---FP------AEANGGVKALQAIAGPFSQVRF 159 (214)
T ss_dssp CEEESSCCHHHHHHHHHSSSCEEEE--ESSHHHHHHHHHTTCCEEEE---TT------TTTTTHHHHHHHHHTTCTTCEE
T ss_pred EEEcCCCCHHHHHHHHHhCCCEEEe--cCCHHHHHHHHHCCCCEEEE---ec------CccccCHHHHHHHhhhCCCCeE
Confidence 9999999888878888888888888 99999999999999999955 87 2334 699999999999 8999
Q ss_pred EEECCCCcccHHHHHHC-CCCCCceEEEeecccCCC
Q 010240 459 VAIGGIGISNASDVMKI-GVSNLKGVAVVSALFDRE 493 (514)
Q Consensus 459 ~a~GGi~~~~~~~~~~~-Ga~~~~gva~~~~i~~~~ 493 (514)
+|+|||+++|+.+++++ |+. +++ +|+|+.++
T Consensus 160 vaiGGI~~~n~~~~l~agg~~---~v~-gS~i~~~~ 191 (214)
T 1wbh_A 160 CPTGGISPANYRDYLALKSVL---CIG-GSWLVPAD 191 (214)
T ss_dssp EEBSSCCTTTHHHHHTSTTBS---CEE-EGGGSCHH
T ss_pred EEECCCCHHHHHHHHhcCCCe---EEE-eccccChh
Confidence 99999999999999999 899 999 99999654
No 22
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=99.91 E-value=1.6e-24 Score=225.64 Aligned_cols=234 Identities=17% Similarity=0.141 Sum_probs=164.1
Q ss_pred ccccccccccccccCCCCCeEEEEecCCCCChhcHHHHHHHHHHcCceeeecceEeeeecCCC-----eeee--EecCH-
Q 010240 3 DDCGAASATTTEQYKMKIPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTAG-----VQGV--NIVPE- 74 (514)
Q Consensus 3 ~~~~~~~~r~~~~~k~~~~~vL~i~g~d~~ggag~~a~~~~l~~~g~~~~~~~t~~~~~n~~~-----~~~~--~~~~~- 74 (514)
|++.+.|+|..++|||++|+||+|+||..|+||+++++..++++ |.+++|+.+.++... .++. .+.+.
T Consensus 227 ~~~~~lp~r~~~~hKg~~G~vlvigGs~~~~GA~~Laa~aAlr~----GaGlv~~~~~~~~~~~~~~~~PE~m~~~~~~~ 302 (502)
T 3rss_A 227 MVRSLLPERPRDSHKGTYGKVLIIAGSRLYSGAPVLSGMGSLKV----GTGLVKLAVPFPQNLIATSRFPELISVPIDTE 302 (502)
T ss_dssp HHHHHSCCCCSSCCGGGGCEEEEECCCSSCCSHHHHHHHHHHHT----TCSEEEEEEETTTHHHHHHHCTTSEEEEECCS
T ss_pred HHHHhcCCCCCCCCCCCCceEEEEECCCCCCCHHHHHHHHHHHh----CcCeEEEEEcHHHHHHHhhcCCeEEEeccccc
Confidence 34557899999999999999999999999999999999999998 888888876554321 1111 12211
Q ss_pred ------HHHHHHHHHHHcCCCcCEEEEccc--CCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhh
Q 010240 75 ------DFVAAQLKSVLSDMQVDVVKTGML--PSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENL 146 (514)
Q Consensus 75 ------~~~~~~l~~l~~~~~~~~i~~G~~--~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~l 146 (514)
+.+. .+..+++ .++++++|+. .+....+.+.+.+++.+.+ +|+||+.. .++.+ .+. +.
T Consensus 303 ~~~~~~~~~~-~~~~~~~--~~davviGpGlg~~~~~~~~~~~~l~~~~~p-vVlDadgl-----~~l~~----~ll-~~ 368 (502)
T 3rss_A 303 KGFFSLQNLQ-ECLELSK--DVDVVAIGPGLGNNEHVREFVNEFLKTLEKP-AVIDADAI-----NVLDT----SVL-KE 368 (502)
T ss_dssp SSSCCGGGHH-HHHHHHT--TCSEEEECTTCCCSHHHHHHHHHHHHHCCSC-EEECHHHH-----HTCCH----HHH-HH
T ss_pred ccccchhhHH-HHHHHhc--cCCEEEEeCCCCCCHHHHHHHHHHHHhcCCC-EEEeCccc-----chhcH----HHH-hc
Confidence 1111 2222333 4677777764 3444455555566666655 99998533 22221 122 12
Q ss_pred cccceEEcCCHHHHHHhhCCCCCCCH-HHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCC
Q 010240 147 LPMADIVTPNVKEASALLGGMQVVTV-ADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRN 225 (514)
Q Consensus 147 l~~~diitpN~~E~~~L~g~~~~~~~-~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d 225 (514)
.+..+|||||..|+++|+| .+..+. ++ .++++++.+++...|++||.. ++++++++ .++...+.+.++
T Consensus 369 ~~~~~vlTPN~~E~~~L~g-~~~~~~~~d-~~aa~~la~~~~~~VvlKG~~--------~vi~~~~~-~~~~~~g~~~~a 437 (502)
T 3rss_A 369 RKSPAVLTPHPGEMARLVK-KTVGDVKYN-YELAEEFAKENDCVLVLKSAT--------TIVTDGEK-TLFNITGNTGLS 437 (502)
T ss_dssp CSSCEEECCCHHHHHHHHT-CCHHHHTTC-HHHHHHHHHHHTSEEEECSSS--------EEEECSSC-EEEECCCCGGGS
T ss_pred cCCCEEEeCCHHHHHHHhC-CCccchHHH-HHHHHHHHHHcCCEEEEeCCC--------eEEEcCCE-EEEECCCCCccc
Confidence 3567999999999999998 433221 34 677888877655678888876 78887774 445556677789
Q ss_pred CCCCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcc
Q 010240 226 THGTGCTLASCIAAELAKGSPMLSAVKVAKCFVETALDYS 265 (514)
Q Consensus 226 ~~GaGD~f~a~i~~~l~~g~~l~~A~~~A~~~~~~~i~~~ 265 (514)
++|+||+|+|+++++|++|.++.+|+..|+.+-..+-+..
T Consensus 438 t~GsGD~Lag~iaa~lA~g~~~~~Aa~~A~~~hg~Ag~~a 477 (502)
T 3rss_A 438 KGGSGDVLTGMIAGFIAQGLSPLEASTVSVYLHGFAAELF 477 (502)
T ss_dssp STTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred cCCchHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999976655554443
No 23
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=99.90 E-value=3.9e-24 Score=200.01 Aligned_cols=183 Identities=15% Similarity=0.109 Sum_probs=146.4
Q ss_pred ceEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHH-HHHHHHHHHhhcCceEEEcCcHHHHHhCCCC
Q 010240 302 LFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDADTRGFLE-AAKACLQICCVHGVPLLINDRIDIALACDAD 380 (514)
Q Consensus 302 ~~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~-~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~ 380 (514)
.+++.|..... .++..+.+++++++|++++|+|.++.+..+.++ +.+++..+|..+|. ++++++++.|.++|||
T Consensus 26 ~~ii~V~r~~~----~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~igagt-vl~~d~~~~A~~aGAd 100 (225)
T 1mxs_A 26 ARILPVITIAR----EEDILPLADALAAGGIRTLEVTLRSQHGLKAIQVLREQRPELCVGAGT-VLDRSMFAAVEAAGAQ 100 (225)
T ss_dssp HSEEEEECCSC----GGGHHHHHHHHHHTTCCEEEEESSSTHHHHHHHHHHHHCTTSEEEEEC-CCSHHHHHHHHHHTCS
T ss_pred CCEEEEEeCCC----HHHHHHHHHHHHHCCCCEEEEecCCccHHHHHHHHHHhCcccEEeeCe-EeeHHHHHHHHHCCCC
Confidence 35777765432 257899999999999999999999877666544 23333333444455 4678999999999999
Q ss_pred eEEeCCCCCCHHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccC-CHHHHHHHHHcC-CCCE
Q 010240 381 GVHLGQSDMPARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTV-GLDGLKTVCLAS-KLPV 458 (514)
Q Consensus 381 gvhl~~~~~~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~-g~~~l~~~~~~~-~~pv 458 (514)
|+|+|+.+.+....++.++.+.++| |+|++|+.+|.+.|+|||.+ || .... |++++++++..+ ++|+
T Consensus 101 ~v~~p~~d~~v~~~~~~~g~~~i~G--~~t~~e~~~A~~~Gad~vk~---FP------a~~~~G~~~lk~i~~~~~~ipv 169 (225)
T 1mxs_A 101 FVVTPGITEDILEAGVDSEIPLLPG--ISTPSEIMMGYALGYRRFKL---FP------AEISGGVAAIKAFGGPFGDIRF 169 (225)
T ss_dssp SEECSSCCHHHHHHHHHCSSCEECE--ECSHHHHHHHHTTTCCEEEE---TT------HHHHTHHHHHHHHHTTTTTCEE
T ss_pred EEEeCCCCHHHHHHHHHhCCCEEEe--eCCHHHHHHHHHCCCCEEEE---cc------CccccCHHHHHHHHhhCCCCeE
Confidence 9999999888888888888888888 99999999999999999955 87 3334 799999999998 8999
Q ss_pred EEECCCCcccHHHHHH-CCCCCCceEEEeecccCC-----CCHHHHHHHHHH
Q 010240 459 VAIGGIGISNASDVMK-IGVSNLKGVAVVSALFDR-----ECILPESKKLHA 504 (514)
Q Consensus 459 ~a~GGi~~~~~~~~~~-~Ga~~~~gva~~~~i~~~-----~~~~~~~~~~~~ 504 (514)
+|+|||+++|+.++++ .|++ +++ +|+|+++ .|+.+..+..++
T Consensus 170 vaiGGI~~~N~~~~l~~~Ga~---~v~-gSai~~~~~i~~~~~~~i~~~a~~ 217 (225)
T 1mxs_A 170 CPTGGVNPANVRNYMALPNVM---CVG-TTWMLDSSWIKNGDWARIEACSAE 217 (225)
T ss_dssp EEBSSCCTTTHHHHHHSTTBC---CEE-ECTTSCHHHHHTTCHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHhccCCE---EEE-EchhcCchhhccCCHHHHHHHHHH
Confidence 9999999999999999 7999 999 9999973 444444444333
No 24
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=99.89 E-value=4.3e-23 Score=192.82 Aligned_cols=173 Identities=15% Similarity=0.177 Sum_probs=137.3
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHH-HHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHHHHHh
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADTRGFLE-AAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPARTARA 396 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~-~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~~~~~ 396 (514)
++..+.+++++++|++++|+|.++.+..+.++ +.+++..++..+|. +++++++++|.++||||+|+|+.+.+.....+
T Consensus 29 ~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~l~vgaGt-vl~~d~~~~A~~aGAd~v~~p~~d~~v~~~ar 107 (224)
T 1vhc_A 29 DDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRPDFLIAAGT-VLTAEQVVLAKSSGADFVVTPGLNPKIVKLCQ 107 (224)
T ss_dssp GGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEES-CCSHHHHHHHHHHTCSEEECSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhCcCcEEeeCc-EeeHHHHHHHHHCCCCEEEECCCCHHHHHHHH
Confidence 57899999999999999999999988766443 22222223333344 44789999999999999999998877544444
Q ss_pred hcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccC-CHHHHHHHHHcC-CCCEEEECCCCcccHHHHHH
Q 010240 397 LLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTV-GLDGLKTVCLAS-KLPVVAIGGIGISNASDVMK 474 (514)
Q Consensus 397 ~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~-g~~~l~~~~~~~-~~pv~a~GGi~~~~~~~~~~ 474 (514)
.++...++| |+|++|+.+|.+.|+|||.+ || .... |+++++++++.+ ++|++|+|||+++|+.++++
T Consensus 108 ~~g~~~i~G--v~t~~e~~~A~~~Gad~vk~---Fp------a~~~gG~~~lk~l~~~~~~ipvvaiGGI~~~N~~~~l~ 176 (224)
T 1vhc_A 108 DLNFPITPG--VNNPMAIEIALEMGISAVKF---FP------AEASGGVKMIKALLGPYAQLQIMPTGGIGLHNIRDYLA 176 (224)
T ss_dssp HTTCCEECE--ECSHHHHHHHHHTTCCEEEE---TT------TTTTTHHHHHHHHHTTTTTCEEEEBSSCCTTTHHHHHT
T ss_pred HhCCCEEec--cCCHHHHHHHHHCCCCEEEE---ee------CccccCHHHHHHHHhhCCCCeEEEECCcCHHHHHHHHh
Confidence 477888888 99999999999999999954 87 3334 699999999998 89999999999999999999
Q ss_pred C-CCCCCceEEEeecccCC-----CCHHHHHHHHHHHH
Q 010240 475 I-GVSNLKGVAVVSALFDR-----ECILPESKKLHAVL 506 (514)
Q Consensus 475 ~-Ga~~~~gva~~~~i~~~-----~~~~~~~~~~~~~~ 506 (514)
+ |+. +++ +|+|+++ .|+.+..+..++.+
T Consensus 177 agga~---~v~-gS~i~~~~~i~~~~~~~i~~~a~~~~ 210 (224)
T 1vhc_A 177 IPNIV---ACG-GSWFVEKKLIQSNNWDEIGRLVREVI 210 (224)
T ss_dssp STTBC---CEE-ECGGGCHHHHHTTCHHHHHHHHHHHH
T ss_pred cCCCE---EEE-EchhcCcchhccCCHHHHHHHHHHHH
Confidence 9 999 999 9999963 45544444444433
No 25
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=99.86 E-value=1.9e-21 Score=181.94 Aligned_cols=174 Identities=19% Similarity=0.245 Sum_probs=146.3
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEE-------cCcHHHHHhCCCCeEEeCCCCCC
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLI-------NDRIDIALACDADGVHLGQSDMP 390 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v-------~~~~~~a~~~ga~gvhl~~~~~~ 390 (514)
+++.+.++++.++|+++|++|.++.+.. +.++++++.+++++++ +++++.+.++|+++||++..+..
T Consensus 19 ~~~~~~~~~~~~~G~~~i~l~~~~~~~~------~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~~~~~~~ 92 (212)
T 2v82_A 19 DEALAHVGAVIDAGFDAVEIPLNSPQWE------QSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVTPNIHSE 92 (212)
T ss_dssp HHHHHHHHHHHHHTCCEEEEETTSTTHH------HHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEEECSSCCHH
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCChhHH------HHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEEEeCCCCHH
Confidence 4678889999999999999999986542 3455666677888888 78899999999999999887655
Q ss_pred HHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCC--CCEEEECCCCccc
Q 010240 391 ARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASK--LPVVAIGGIGISN 468 (514)
Q Consensus 391 ~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~--~pv~a~GGi~~~~ 468 (514)
....++.++...++| |||++|+..+.+.|+|||.+ |||. ..|++.++++++.++ +||++.|||+++|
T Consensus 93 ~~~~~~~~g~~~~~g--~~t~~e~~~a~~~G~d~v~v---~~t~------~~g~~~~~~l~~~~~~~ipvia~GGI~~~~ 161 (212)
T 2v82_A 93 VIRRAVGYGMTVCPG--CATATEAFTALEAGAQALKI---FPSS------AFGPQYIKALKAVLPSDIAVFAVGGVTPEN 161 (212)
T ss_dssp HHHHHHHTTCEEECE--ECSHHHHHHHHHTTCSEEEE---TTHH------HHCHHHHHHHHTTSCTTCEEEEESSCCTTT
T ss_pred HHHHHHHcCCCEEee--cCCHHHHHHHHHCCCCEEEE---ecCC------CCCHHHHHHHHHhccCCCeEEEeCCCCHHH
Confidence 555555555555555 99999999999999999974 6642 368999999998876 9999999999999
Q ss_pred HHHHHHCCCCCCceEEEeecccCC----CCHHHHHHHHHHHHHHHhh
Q 010240 469 ASDVMKIGVSNLKGVAVVSALFDR----ECILPESKKLHAVLMDAVQ 511 (514)
Q Consensus 469 ~~~~~~~Ga~~~~gva~~~~i~~~----~~~~~~~~~~~~~~~~~~~ 511 (514)
+.+++++|++ ||++||+||.. +||.+.+++|++.+++..|
T Consensus 162 i~~~~~~Ga~---gv~vGsai~~~~~~~~d~~~~~~~l~~~~~~~~~ 205 (212)
T 2v82_A 162 LAQWIDAGCA---GAGLGSDLYRAGQSVERTAQQAAAFVKAYREAVQ 205 (212)
T ss_dssp HHHHHHHTCS---EEEECTTTCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCC---EEEEChHHhCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 99999999987 6899999999999988765
No 26
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=99.86 E-value=2.1e-22 Score=189.98 Aligned_cols=188 Identities=16% Similarity=0.096 Sum_probs=154.9
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCC----HHHHHHHHHHHHHHHh-hcCceEEEcC---cHHHHHhCCCCeEEeCCC--
Q 010240 318 RSITDAVKAALEGGATIIQLREKDAD----TRGFLEAAKACLQICC-VHGVPLLIND---RIDIALACDADGVHLGQS-- 387 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~----~~~~~~~~~~~~~~~~-~~~~~l~v~~---~~~~a~~~ga~gvhl~~~-- 387 (514)
..+.+.++.+.++|++++|+|..+.. ...-.+.++++++.|. .+++++++++ +++.+.++||||+|++..
T Consensus 17 ~~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv~dp~~~i~~~~~aGadgv~vh~e~~ 96 (230)
T 1tqj_A 17 SRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMIVEPEKYVEDFAKAGADIISVHVEHN 96 (230)
T ss_dssp GGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGCCSEEEEEEESSSGGGTHHHHHHHTCSEEEEECSTT
T ss_pred hHHHHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhcCCcEEEEEEccCHHHHHHHHHHcCCCEEEECcccc
Confidence 46888899999999999999986432 1111256677777774 6788899988 689999999999977766
Q ss_pred --CCCHHHHHhhcCCCcEEEEec--CCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-----CCCE
Q 010240 388 --DMPARTARALLGPDKIIGVSC--KTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-----KLPV 458 (514)
Q Consensus 388 --~~~~~~~~~~~~~~~~ig~s~--~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-----~~pv 458 (514)
+.....++...+.+..+|.++ +|+.|..++...++|||.+++++|+.++....+.+++.++++++.. ++||
T Consensus 97 ~~~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~~~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I 176 (230)
T 1tqj_A 97 ASPHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVLPVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWI 176 (230)
T ss_dssp TCTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEE
T ss_pred cchhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHHhcCCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcE
Confidence 555667777777899999999 7888888888889999999999999887666677899999998876 7999
Q ss_pred EEECCCCcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHH
Q 010240 459 VAIGGIGISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMD 508 (514)
Q Consensus 459 ~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~ 508 (514)
.+.|||+.+|+.++.++||+ ++++||+|++++||.+.+++|++.+++
T Consensus 177 ~v~GGI~~~~~~~~~~aGad---~vvvGSai~~a~d~~~~~~~l~~~~~~ 223 (230)
T 1tqj_A 177 EVDGGLKPNNTWQVLEAGAN---AIVAGSAVFNAPNYAEAIAGVRNSKRP 223 (230)
T ss_dssp EEESSCCTTTTHHHHHHTCC---EEEESHHHHTSSCHHHHHHHHHTCCC-
T ss_pred EEECCcCHHHHHHHHHcCCC---EEEECHHHHCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999 999999999999999999999876554
No 27
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=99.85 E-value=2.6e-21 Score=182.85 Aligned_cols=192 Identities=13% Similarity=0.105 Sum_probs=153.7
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCH----HHHHHHHHHHHHHHh-hcCceEEEcC---cHHHHHhCCCCeE--EeCCC
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADT----RGFLEAAKACLQICC-VHGVPLLIND---RIDIALACDADGV--HLGQS 387 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~----~~~~~~~~~~~~~~~-~~~~~l~v~~---~~~~a~~~ga~gv--hl~~~ 387 (514)
.++.+.++.+.++|++++|+|.++.+. ..-.+.++++++.+. .+++++++++ +++.+.++|+|++ |..+.
T Consensus 19 ~~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~~~~~~v~lmv~d~~~~i~~~~~agad~v~vH~~~~ 98 (228)
T 1h1y_A 19 ANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIEVS 98 (228)
T ss_dssp GGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSCGGGGHHHHHHHTCSEEEEEGGGC
T ss_pred HHHHHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhcCCcEEEEEEecCHHHHHHHHHHcCCCEEEECCCCc
Confidence 467888999999999999999654321 001355666766663 5677899988 5888999999999 77666
Q ss_pred CCC-HHHHHhhcCCCcEEEEec--CCHHHHHHhhhC---CCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEE
Q 010240 388 DMP-ARTARALLGPDKIIGVSC--KTPEEAHQAWID---GANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVA 460 (514)
Q Consensus 388 ~~~-~~~~~~~~~~~~~ig~s~--~~~~e~~~a~~~---g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a 460 (514)
+.. ...++...+.+..+|.++ +|+.|..++... ++||+.+++++|+.++....+.+++.++++++.. ++|+++
T Consensus 99 ~~~~~~~~~~i~~~g~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v 178 (228)
T 1h1y_A 99 RDNWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEV 178 (228)
T ss_dssp TTTHHHHHHHHHHTTCEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEE
T ss_pred ccHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEE
Confidence 666 555666666788899998 566555444444 8999999999998887666667889999999887 899999
Q ss_pred ECCCCcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHHhhh
Q 010240 461 IGGIGISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDAVQR 512 (514)
Q Consensus 461 ~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 512 (514)
.|||+++|+.+++++|++ ++++||+|++++||.+.+++|++.+++...|
T Consensus 179 ~GGI~~~ni~~~~~aGaD---~vvvGsai~~~~d~~~~~~~l~~~~~~~~~~ 227 (228)
T 1h1y_A 179 DGGLGPSTIDVAASAGAN---CIVAGSSIFGAAEPGEVISALRKSVEGSQNK 227 (228)
T ss_dssp ESSCSTTTHHHHHHHTCC---EEEESHHHHTSSCHHHHHHHHHHHHHHC---
T ss_pred ECCcCHHHHHHHHHcCCC---EEEECHHHHCCCCHHHHHHHHHHHHHHhhhc
Confidence 999999999999999999 9999999999999999999999988876554
No 28
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=99.82 E-value=3.6e-19 Score=176.35 Aligned_cols=155 Identities=23% Similarity=0.290 Sum_probs=131.6
Q ss_pred CcCEEEEcccCCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCCCC
Q 010240 89 QVDVVKTGMLPSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGGMQ 168 (514)
Q Consensus 89 ~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~ 168 (514)
+++++.++...+.+.+..+++.+++.+.+ +++||++.. .+ .+.+++++|+++||..|++.|+| ..
T Consensus 134 ~~~~v~~~~~~~~~~~~~~~~~a~~~g~~-v~~D~~~~~----~~---------~~~ll~~~dil~~N~~E~~~l~g-~~ 198 (309)
T 1rkd_A 134 NASALLMQLESPLESVMAAAKIAHQNKTI-VALNPAPAR----EL---------PDELLALVDIITPNETEAEKLTG-IR 198 (309)
T ss_dssp HCSEEEECSSSCHHHHHHHHHHHHHTTCE-EEECCCSCC----CC---------CHHHHTTCSEECCCHHHHHHHHS-CC
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHHcCCE-EEEECCccc----cc---------hHHHHhhCCEEEcCHHHHHHHhC-CC
Confidence 47888887766778888888888887765 999997651 11 12567899999999999999998 54
Q ss_pred CCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHHHcCCCHH
Q 010240 169 VVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELAKGSPML 248 (514)
Q Consensus 169 ~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~~g~~l~ 248 (514)
..+.++..+++++|.++|++.|++|.|+.| .+++++++.++++.++++++|++||||+|+|+|++.|++|++++
T Consensus 199 ~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G------~~~~~~~~~~~~~~~~v~~vdt~GAGD~f~a~~~~~l~~g~~~~ 272 (309)
T 1rkd_A 199 VENDEDAAKAAQVLHEKGIRTVLITLGSRG------VWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLP 272 (309)
T ss_dssp CSSHHHHHHHHHHHHHTTCSEEEEECGGGC------EEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHH
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEEECCCc------EEEEeCCceEEcCCCCCCcCCCCChHHHHHHHHHHHHHcCCCHH
Confidence 456678888999999999999999999987 77778888888888888889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhc
Q 010240 249 SAVKVAKCFVETALDY 264 (514)
Q Consensus 249 ~A~~~A~~~~~~~i~~ 264 (514)
+|+++|+.++..+++.
T Consensus 273 ~a~~~a~~~aa~~~~~ 288 (309)
T 1rkd_A 273 EAIRFAHAAAAIAVTR 288 (309)
T ss_dssp HHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHcCC
Confidence 9999999998877775
No 29
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=99.82 E-value=1.6e-20 Score=193.81 Aligned_cols=211 Identities=18% Similarity=0.146 Sum_probs=147.0
Q ss_pred ccccc-cccccCCCCCeEEEEecCCCCChhcHHHHHHHHHHcCceeeecceEeeeecCCCeeeeEecCHHHHHHHHHHHH
Q 010240 7 AASAT-TTEQYKMKIPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTAGVQGVNIVPEDFVAAQLKSVL 85 (514)
Q Consensus 7 ~~~~r-~~~~~k~~~~~vL~i~g~d~~ggag~~a~~~~l~~~g~~~~~~~t~~~~~n~~~~~~~~~~~~~~~~~~l~~l~ 85 (514)
..|+| ..++||+++|+|++|+|| |.||++++...++++ |.+++|+.+....... ...+++.+.. ..+.
T Consensus 222 ~lp~r~~~~~hKg~~G~vlvigGs--~~GA~~laa~aAlr~----GaGlv~~~~~~~~~~~---~~~~pe~m~~--~~~~ 290 (475)
T 3k5w_A 222 KLPLRDKKNAHKGDYGHAHVLLGK--HSGAGLLSALSALSF----GSGVVSVQALECEITS---NNKPLELVFC--ENFP 290 (475)
T ss_dssp CCCCCCCSSCCGGGGCEEEEEECS--SHHHHHHHHHHHHHT----TCSEEEEEESSSCCSS---SSSCTTSEEE--SSCC
T ss_pred cccCCCCCCCCCCCCCeEEEEeCC--CCcHHHHHHHHHHHh----CCCeEEEeccHHHhhc---ccCChhheee--hhhc
Confidence 36777 799999999999999999 999999999999999 8888887765441110 0112211100 0011
Q ss_pred cCCCcCEEEEccc--CCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHh
Q 010240 86 SDMQVDVVKTGML--PSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASAL 163 (514)
Q Consensus 86 ~~~~~~~i~~G~~--~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L 163 (514)
.+++++.+|+. .+.. + +.++++. . |+|+| .++... . .+. .+++..+|||||..|+++|
T Consensus 291 --~~~~a~~iGPGlG~~~~--~-l~~~l~~-~--p~VlD-----ADaL~~--~----~~~-~~~~~~~VlTPh~~E~~rL 350 (475)
T 3k5w_A 291 --NLLSAFALGMGLENIPK--D-FNRWLEL-A--PCVLD-----AGVFYH--K----EIL-QALEKEAVLTPHPKEFLSL 350 (475)
T ss_dssp --SSCSEEEECTTCSSCCT--T-HHHHHHH-S--CEEEE-----GGGGGS--G----GGG-TTTTSSEEEECCHHHHHHH
T ss_pred --cCCCEEEEcCCCCCCHH--H-HHHHHhc-C--CEEEE-----CcccCC--c----hhh-hccCCCEEECCCHHHHHHH
Confidence 25788888764 2322 3 4444444 3 59999 454321 1 111 3345668999999999999
Q ss_pred hCCC----CCCC-HHHHHHHHHHHHhcC-CCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHH
Q 010240 164 LGGM----QVVT-VADMCSAAKLLHNLG-PRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCI 237 (514)
Q Consensus 164 ~g~~----~~~~-~~~~~~~a~~l~~~g-~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i 237 (514)
+|.. +..+ .++..++++++.+++ ..+|++||++ +++++++. .++.....+.+.++|+||+|+|++
T Consensus 351 ~g~~~~~v~~~~~~~d~~~aa~~la~~~g~~~VvlKG~~--------~vI~~~~~-~~~~~~g~~~mat~GtGdvLsg~I 421 (475)
T 3k5w_A 351 LNLVGINISMLELLDNKLEIARDFSQKYPKVVLLLKGAN--------TLIAHQGQ-VFINILGSVALAKAGSGDVLAGLI 421 (475)
T ss_dssp HHHTSCCCCTTSGGGSCC--CHHHHHHCTTEEEEECSSS--------EEEEETTE-EEEECCCCGGGCSTTHHHHHHHHH
T ss_pred hCCccCCCCcchhHHHHHHHHHHHHHHcCCeEEEEeCCC--------CEEECCCE-EEEECCCCCCCCCCCHHHHHHHHH
Confidence 9730 2222 345677888998877 7889999988 78887554 456666777788999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHH
Q 010240 238 AAELAKGSPMLSAVKVAKCF 257 (514)
Q Consensus 238 ~~~l~~g~~l~~A~~~A~~~ 257 (514)
+++|++|.++.+|+..|...
T Consensus 422 aa~lA~g~~~~~Aa~~a~~l 441 (475)
T 3k5w_A 422 LSLLSQNYTPLDAAINASLA 441 (475)
T ss_dssp HHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHH
Confidence 99999999999999986444
No 30
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=99.82 E-value=6e-20 Score=170.78 Aligned_cols=170 Identities=15% Similarity=0.097 Sum_probs=132.4
Q ss_pred eEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHH-HHHHhhcCceEEEcCcHHHHHhCCCCe
Q 010240 303 FLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDADTRGFLEAAKAC-LQICCVHGVPLLINDRIDIALACDADG 381 (514)
Q Consensus 303 ~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~-~~~~~~~~~~l~v~~~~~~a~~~ga~g 381 (514)
++..|..... .++..+++++++++|++++|+|.++.+..+.++.+++- ..++...| +++.+++++.+.++||++
T Consensus 35 ~vv~Vir~~~----~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaG-TVlt~~~a~~Ai~AGA~f 109 (232)
T 4e38_A 35 KVIPVIAIDN----AEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAG-TILNGEQALAAKEAGATF 109 (232)
T ss_dssp CEEEEECCSS----GGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEE-CCCSHHHHHHHHHHTCSE
T ss_pred CEEEEEEcCC----HHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCCCEEeEC-CcCCHHHHHHHHHcCCCE
Confidence 4555543322 25789999999999999999999998877655433321 11222222 345578899999999999
Q ss_pred EEeCCCCCCHHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccC-CHHHHHHHHHcC-CCCEE
Q 010240 382 VHLGQSDMPARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTV-GLDGLKTVCLAS-KLPVV 459 (514)
Q Consensus 382 vhl~~~~~~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~-g~~~l~~~~~~~-~~pv~ 459 (514)
+|+|+.+.+....++.. +..+...|.|++|+.+|.++|+||| ++||+ ... |+++++.++.++ ++|++
T Consensus 110 IvsP~~~~~vi~~~~~~--gi~~ipGv~TptEi~~A~~~Gad~v---K~FPa------~~~gG~~~lkal~~p~p~ip~~ 178 (232)
T 4e38_A 110 VVSPGFNPNTVRACQEI--GIDIVPGVNNPSTVEAALEMGLTTL---KFFPA------EASGGISMVKSLVGPYGDIRLM 178 (232)
T ss_dssp EECSSCCHHHHHHHHHH--TCEEECEECSHHHHHHHHHTTCCEE---EECST------TTTTHHHHHHHHHTTCTTCEEE
T ss_pred EEeCCCCHHHHHHHHHc--CCCEEcCCCCHHHHHHHHHcCCCEE---EECcC------ccccCHHHHHHHHHHhcCCCee
Confidence 99999776655555544 4555455889999999999999999 77985 234 799999999988 79999
Q ss_pred EECCCCcccHHHHHHCCCCCCceEEEeecccC
Q 010240 460 AIGGIGISNASDVMKIGVSNLKGVAVVSALFD 491 (514)
Q Consensus 460 a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~~ 491 (514)
++|||+++|+.+|+++|+. ++++||.++.
T Consensus 179 ptGGI~~~n~~~~l~aGa~---~~vgGs~l~~ 207 (232)
T 4e38_A 179 PTGGITPSNIDNYLAIPQV---LACGGTWMVD 207 (232)
T ss_dssp EBSSCCTTTHHHHHTSTTB---CCEEECGGGC
T ss_pred eEcCCCHHHHHHHHHCCCe---EEEECchhcC
Confidence 9999999999999999999 9888998874
No 31
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=99.82 E-value=3.5e-19 Score=178.24 Aligned_cols=156 Identities=17% Similarity=0.200 Sum_probs=132.0
Q ss_pred CcCEEEEcccCCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCCCC
Q 010240 89 QVDVVKTGMLPSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGGMQ 168 (514)
Q Consensus 89 ~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~ 168 (514)
+++++.++...+.+.+..+++.+++.+.+ +++||++... . +.+.+++++|+++||..|++.|+| ..
T Consensus 154 ~~~~v~~~~~~~~~~~~~~~~~a~~~g~~-v~~Dp~~~~~---~---------~~~~ll~~~dil~~N~~Ea~~l~g-~~ 219 (331)
T 2fv7_A 154 RAKVMVCQLEITPATSLEALTMARRSGVK-TLFNPAPAIA---D---------LDPQFYTLSDVFCCNESEAEILTG-LT 219 (331)
T ss_dssp HCSEEEECSSSCHHHHHHHHHHHHHTTCE-EEECCCSCCT---T---------CCTHHHHTCSEEEEEHHHHHHHHS-SC
T ss_pred cCCEEEEecCCCHHHHHHHHHHHHHcCCE-EEEeCCcccc---c---------chHHHHhcCCEEEeCHHHHHHHhC-CC
Confidence 47889998877778888888888887765 9999986521 1 112467899999999999999998 44
Q ss_pred CCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCC--eEEEEeecccCCCCCCCCcchHHHHHHHHHHcC--
Q 010240 169 VVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGE--DFHELRSSRVNTRNTHGTGCTLASCIAAELAKG-- 244 (514)
Q Consensus 169 ~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~~g-- 244 (514)
..+.++..+++++|.++|++.|++|.|+.| .++++++ +.++++.++++++|++||||+|+|+|++.|++|
T Consensus 220 ~~~~~~~~~~~~~l~~~g~~~VvvT~G~~G------~~~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~ 293 (331)
T 2fv7_A 220 VGSAADAGEAALVLLKRGCQVVIITLGAEG------CVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAYYPN 293 (331)
T ss_dssp CCSHHHHHHHHHHHHTTTCSEEEEECGGGC------EEEEESSCCSCEEECCCCCCCSCCTTHHHHHHHHHHHHHHHCTT
T ss_pred CCChhHHHHHHHHHHHcCCCEEEEEECCCc------eEEEECCCCceeEecCCCCccCCCCCchHHHHHHHHHHHHhCCC
Confidence 556678888999999999999999999977 7777766 677888888888999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhc
Q 010240 245 SPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 245 ~~l~~A~~~A~~~~~~~i~~ 264 (514)
+++++|+++|++++..+++.
T Consensus 294 ~~~~~a~~~A~~~aa~~v~~ 313 (331)
T 2fv7_A 294 LSLEDMLNRSNFIAAVSVQA 313 (331)
T ss_dssp SCHHHHHHHHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHHHHHhCC
Confidence 99999999999998888775
No 32
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=99.81 E-value=6.7e-19 Score=174.01 Aligned_cols=155 Identities=21% Similarity=0.306 Sum_probs=132.2
Q ss_pred CcCEEEEcccCCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCCCC
Q 010240 89 QVDVVKTGMLPSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGGMQ 168 (514)
Q Consensus 89 ~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~ 168 (514)
+++++.++...+.+.+..+++.+++.+.+ +++||.... . +.+.+++++|+++||..|++.|+| ..
T Consensus 133 ~~~~v~~~~~~~~~~~~~~~~~a~~~~~~-v~~D~~~~~---------~----~~~~ll~~~dil~~N~~E~~~l~g-~~ 197 (304)
T 3ry7_A 133 NADFVVAQLEVPIPAIISAFEIAKAHGVT-TVLNPAPAK---------A----LPNELLSLIDIIVPNETEAELLSG-IK 197 (304)
T ss_dssp TCSEEEEETTSCHHHHHHHHHHHHHTTCE-EEEECCSCC---------C----CCHHHHTTCSEECCBHHHHHHHHS-CC
T ss_pred cCCEEEEcCCCCHHHHHHHHHHHHHcCCE-EEEeCCccc---------c----ccHHHHHhCCEEecCHHHHHHHhC-CC
Confidence 57888888777888899999999988765 999985320 1 113567899999999999999998 55
Q ss_pred CCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHHHcC-CCH
Q 010240 169 VVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELAKG-SPM 247 (514)
Q Consensus 169 ~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~~g-~~l 247 (514)
..+.++..+++++|.+.|++.|++|.|..| .+++++++.++++.++++++|++||||+|+|+|+++|++| +++
T Consensus 198 ~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G------~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~~~ 271 (304)
T 3ry7_A 198 VTNEQSMKDNANYFLSIGIKTVLITLGKQG------TYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLNKSQDNL 271 (304)
T ss_dssp CCSHHHHHHHHHHHHHTTCCEEEEECGGGC------EEEECSSCEEEECCSSCCSSCCSSHHHHHHHHHHHHCCTTCTTH
T ss_pred CCChhHHHHHHHHHHHcCCCEEEEEeCCCc------eEEEECCeeEEecCCCcccCCCCCchHHHHHHHHHHHHcCCCCH
Confidence 566778889999999999999999999988 7888877888899988888999999999999999999999 999
Q ss_pred HHHHHHHHHHHHHHHhc
Q 010240 248 LSAVKVAKCFVETALDY 264 (514)
Q Consensus 248 ~~A~~~A~~~~~~~i~~ 264 (514)
++|+++|++++..++++
T Consensus 272 ~~a~~~A~~~aa~~~~~ 288 (304)
T 3ry7_A 272 ADAIDFGNKASSLTVQK 288 (304)
T ss_dssp HHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHhCC
Confidence 99999999996665553
No 33
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=99.80 E-value=2.1e-18 Score=172.42 Aligned_cols=155 Identities=17% Similarity=0.288 Sum_probs=128.0
Q ss_pred CcCEEEEcccCCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCCCC
Q 010240 89 QVDVVKTGMLPSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGGMQ 168 (514)
Q Consensus 89 ~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~ 168 (514)
.++.+.++...+ +.+..+.+ +++.+.+ +++||+.. ...+.+ +.+++++|+++||..|++.|+| ..
T Consensus 136 ~~~~~~~~~~~~-~~~~~l~~-a~~~~~~-v~~D~~~~----------~~~~~~-~~~l~~~dil~~N~~E~~~l~g-~~ 200 (328)
T 3kzh_A 136 NAEYTVLDSDNP-EIMEYLLK-NFKDKTN-FILDPVSA----------EKASWV-KHLIKDFHTIKPNRHEAEILAG-FP 200 (328)
T ss_dssp TCSEEEEESSCH-HHHHHHHH-HHTTTSE-EEEECCSH----------HHHHTS-TTTGGGCSEECCBHHHHHHHHT-SC
T ss_pred cCCEEEEeCCcH-HHHHHHHH-HhhcCCc-EEEEeCCH----------HHHHHH-HHHhcCCcEEeCCHHHHHHHHC-CC
Confidence 467777765433 66777777 6666654 99998532 112223 3678999999999999999998 55
Q ss_pred CCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHHHcCCCHH
Q 010240 169 VVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELAKGSPML 248 (514)
Q Consensus 169 ~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~~g~~l~ 248 (514)
..+.++..++++.|.+.|++.|++|.|..| .+++++++.++++.++++++|++||||+|+|+|++.|++|++++
T Consensus 201 ~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G------~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~~~ 274 (328)
T 3kzh_A 201 ITDTDDLIKASNYFLGLGIKKVFISLDADG------IFYNDGVSCGKIKATEVDVKNVTGAGDSFVAGLGYGYMNKMPIE 274 (328)
T ss_dssp CCSHHHHHHHHHHHHHHTCCEEEEECGGGC------EEEECSSCEEEEEESSCCCSCCTTHHHHHHHHHHHHHHTTCCHH
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEEeCCCC------EEEEeCCceEEecCCCcccCCCCChhHHHHHHHHHHHHcCCCHH
Confidence 566788889999999999999999999988 78888777888999888889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhc
Q 010240 249 SAVKVAKCFVETALDY 264 (514)
Q Consensus 249 ~A~~~A~~~~~~~i~~ 264 (514)
+|+++|++++..+++.
T Consensus 275 ~a~~~A~a~aa~~v~~ 290 (328)
T 3kzh_A 275 DIVKFAMTMSNITISH 290 (328)
T ss_dssp HHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhcC
Confidence 9999999998888775
No 34
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=99.78 E-value=1.8e-18 Score=172.85 Aligned_cols=160 Identities=18% Similarity=0.229 Sum_probs=127.5
Q ss_pred CcCEEEEc-cc---CC---HHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHH
Q 010240 89 QVDVVKTG-ML---PS---TDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEAS 161 (514)
Q Consensus 89 ~~~~i~~G-~~---~~---~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~ 161 (514)
+++++.++ +. .+ .+.+..+++.+++.+.+ +++||++++. .+.+.+......+++++++|+++||..|++
T Consensus 145 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~~a~~~g~~-v~~Dp~~~~~---~~~~~~~~~~~~~~ll~~~dil~~N~~E~~ 220 (328)
T 4e69_A 145 RADVVYFSGITLAILDQCGRATLLRALAQARATGRT-IAFDPNLRPR---LWAGTGEMTETIMQGAAVSDIALPSFEDEA 220 (328)
T ss_dssp TCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCE-EEEECCCCGG---GCSCHHHHHHHHHHHHTTCSEECCBHHHHH
T ss_pred CCCEEEECCchhhccCchHHHHHHHHHHHHHhCCCE-EEEeCCCChh---hcCCHHHHHHHHHHHHHhCCEEeCCHHHHH
Confidence 57888775 21 12 34455666777777665 9999987643 222334344445578999999999999999
Q ss_pred HhhCCCCCCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecc-cCCCCCCCCcchHHHHHHHH
Q 010240 162 ALLGGMQVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSR-VNTRNTHGTGCTLASCIAAE 240 (514)
Q Consensus 162 ~L~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~GaGD~f~a~i~~~ 240 (514)
.|+| . ++..++++.|.++|++.|++|.|..| .+++++++.++++..+ .+++|++||||+|+|+|++.
T Consensus 221 ~l~g-~-----~~~~~~~~~l~~~g~~~vvvt~G~~G------~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~ 288 (328)
T 4e69_A 221 AWFG-D-----AGPDATADRYARAGVRSVVVKNGPHA------VHFLQDGRRGRVPVPPVAQVVDTTAAGDSFNAGLLDS 288 (328)
T ss_dssp HHHT-C-----SSHHHHHHHHHTTTCSEEEEBCTTSC------EEEEETTEEEEECCCCCCSCCCCTTHHHHHHHHHHHH
T ss_pred HHcC-C-----CCHHHHHHHHHhcCCCEEEEEeCCCC------eEEEeCCceEEecCCCCCCccCCCChhHHHHHHHHHH
Confidence 9998 2 24677888999999999999999988 7888888888888875 67889999999999999999
Q ss_pred HHcCCCHHHHHHHHHHHHHHHHhc
Q 010240 241 LAKGSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 241 l~~g~~l~~A~~~A~~~~~~~i~~ 264 (514)
|++|+++++|+++|+.++..+++.
T Consensus 289 l~~g~~l~~a~~~A~~~aa~~v~~ 312 (328)
T 4e69_A 289 VLAGQPLETAIAAAAALAGQVVQG 312 (328)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHTS
T ss_pred HHCCCCHHHHHHHHHHHHHHHHcc
Confidence 999999999999999998888775
No 35
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=99.78 E-value=1.5e-17 Score=164.43 Aligned_cols=154 Identities=21% Similarity=0.261 Sum_probs=128.6
Q ss_pred CcCEEEE-cccC---CHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcc-cceEEcCCHHHHHHh
Q 010240 89 QVDVVKT-GMLP---STDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLP-MADIVTPNVKEASAL 163 (514)
Q Consensus 89 ~~~~i~~-G~~~---~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~-~~diitpN~~E~~~L 163 (514)
+++++.+ |+.. +.+.+..+++.+++.+.+ +++||+. ..+ .++++ ++|+++||..|++.|
T Consensus 125 ~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~-v~~D~~~--------------~~~-~~~l~~~~dil~~N~~E~~~l 188 (306)
T 2abq_A 125 KGDVLVLAGSVPQAMPQTIYRSMTQIAKERGAF-VAVDTSG--------------EAL-HEVLAAKPSFIKPNHHELSEL 188 (306)
T ss_dssp TTCEEEEESCCCTTSCTTHHHHHHHHHHTTTCE-EEEECCH--------------HHH-HHHGGGCCSEECCBHHHHHHH
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHHHhcCCE-EEEECCh--------------HHH-HHHHhcCCcEEecCHHHHHHH
Confidence 5787765 6653 346777888888887765 9999841 123 35778 999999999999999
Q ss_pred hCCCCCCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHHHc
Q 010240 164 LGGMQVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELAK 243 (514)
Q Consensus 164 ~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~~ 243 (514)
+| ....+.++..++++++.++|++.|++|.|..| .+++.+++.++++.++++++|++||||+|+|+|++.|++
T Consensus 189 ~g-~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G------~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~ 261 (306)
T 2abq_A 189 VS-KPIASIEDAIPHVQRLIGEGIESILVSFAGDG------ALFASAEGMFHVNVPSGEVRNSVGAGDSVVAGFLAALQE 261 (306)
T ss_dssp HT-SCCCSHHHHHHHHHHHHHTTCCEEEEECGGGC------EEEEETTEEEEECCCCCCCCCCSSHHHHHHHHHHHHHHT
T ss_pred hC-CCCCCHHHHHHHHHHHHHcCCCEEEEecCCCc------eEEEeCCCEEEEeCCCccccCCccHHHHHHHHHHHHHHc
Confidence 98 54556678888899999999999999999988 777777777888888888899999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHhcc
Q 010240 244 GSPMLSAVKVAKCFVETALDYS 265 (514)
Q Consensus 244 g~~l~~A~~~A~~~~~~~i~~~ 265 (514)
|+++++|+++|++++..+++..
T Consensus 262 g~~~~~a~~~A~a~aa~~v~~~ 283 (306)
T 2abq_A 262 GKSLEDAVPFAVAAGSATAFSD 283 (306)
T ss_dssp TCCHHHHHHHHHHHHHHHHHSS
T ss_pred CCCHHHHHHHHHHHHHHHhcCc
Confidence 9999999999999988887763
No 36
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=99.77 E-value=2.2e-18 Score=171.56 Aligned_cols=160 Identities=17% Similarity=0.171 Sum_probs=125.9
Q ss_pred CcCEEEEcc-c---CCH---HHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHH
Q 010240 89 QVDVVKTGM-L---PST---DLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEAS 161 (514)
Q Consensus 89 ~~~~i~~G~-~---~~~---~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~ 161 (514)
+++.+.++. . .++ +.+..+++.+++.+.+ +++||+++. ..+.+.+......+++++++|+++||..|++
T Consensus 129 ~~~~v~~~g~~~~~l~~~~~~~~~~~~~~a~~~g~~-v~~Dp~~~~---~~~~~~~~~~~~~~~ll~~~di~~~n~~E~~ 204 (319)
T 3lhx_A 129 NFDYLYLSGISLAILSPTSREKLLSLLRECRAKGGK-VIFDNNYRP---RLWASKEETQQVYQQMLECTDIAFLTLDDED 204 (319)
T ss_dssp TCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCE-EEEECCCCG---GGSSCHHHHHHHHHHHHTTCSEEEEEHHHHH
T ss_pred CCCEEEEcCchhhhcCchhHHHHHHHHHHHHhcCCE-EEEeCcCCc---ccccCHHHHHHHHHHHHhhCCcccCCHHHHH
Confidence 578888752 1 122 5667777788877765 999997653 1233444444455578999999999999999
Q ss_pred HhhCCCCCCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEE-EEeec---ccCCCCCCCCcchHHHHH
Q 010240 162 ALLGGMQVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFH-ELRSS---RVNTRNTHGTGCTLASCI 237 (514)
Q Consensus 162 ~L~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~-~~~~~---~~~~~d~~GaGD~f~a~i 237 (514)
.|+|. ++..+++++|.++|++.|++|.|..| .+++++++.+ +++.. .++++||+||||+|+|+|
T Consensus 205 ~l~g~------~~~~~~~~~l~~~g~~~vvvt~G~~G------~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~ 272 (319)
T 3lhx_A 205 ALWGQ------QPVEDVIARTHNAGVKEVVVKRGADS------CLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGY 272 (319)
T ss_dssp HHHCC------CCHHHHHHHHHHTTCSEEEEEETTEE------EEEEETTSCCEEECCCCCCGGGCCCCTTHHHHHHHHH
T ss_pred HHhCC------CCHHHHHHHHHhcCCCEEEEEECCCC------eEEEECCcceEEcccccCCCCccCCCCCccHHHHHHH
Confidence 99982 24567788899999999999999877 7777766544 77774 567889999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHhc
Q 010240 238 AAELAKGSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 238 ~~~l~~g~~l~~A~~~A~~~~~~~i~~ 264 (514)
++.|++|+++++|+++|+.+++.+++.
T Consensus 273 ~~~l~~g~~~~~a~~~A~~~aa~~v~~ 299 (319)
T 3lhx_A 273 LAVRLTGGSAENAAKRGHLTASTVIQY 299 (319)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHcCCCHHHHHHHHHHHHHhhhcc
Confidence 999999999999999999998888775
No 37
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=99.77 E-value=1.5e-17 Score=164.44 Aligned_cols=153 Identities=24% Similarity=0.273 Sum_probs=125.9
Q ss_pred CcCEEEE-cccCC---HHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcc-cceEEcCCHHHHHHh
Q 010240 89 QVDVVKT-GMLPS---TDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLP-MADIVTPNVKEASAL 163 (514)
Q Consensus 89 ~~~~i~~-G~~~~---~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~-~~diitpN~~E~~~L 163 (514)
+++++.+ |++.. .+.+..+++.+++.+.+ +++||+. ..+. .+++ .+|+++||..|++.|
T Consensus 125 ~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~-v~~D~~~--------------~~~~-~~l~~~~dil~~N~~E~~~l 188 (306)
T 2jg5_A 125 SEDIVIVAGSVPSSIPSDAYAQIAQITAQTGAK-LVVDAEK--------------ELAE-SVLPYHPLFIKPNKDELEVM 188 (306)
T ss_dssp TTCEEEEESCCCTTSCTTHHHHHHHHHHHHCCE-EEEECCH--------------HHHH-HHGGGCCSEECCBHHHHHHH
T ss_pred CCCEEEEeCCCCCCCChHHHHHHHHHHHHCCCE-EEEECCh--------------HHHH-HHHhcCCeEEecCHHHHHHH
Confidence 5776654 66543 46777888888877765 9999841 1233 4566 699999999999999
Q ss_pred hCCCCCCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHHHc
Q 010240 164 LGGMQVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELAK 243 (514)
Q Consensus 164 ~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~~ 243 (514)
+| ....+.++..++++++.+.|++.|++|.|+.| ++++++++.++++.++++++|++||||+|+|+|+++|++
T Consensus 189 ~g-~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G------~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~ 261 (306)
T 2jg5_A 189 FN-TTVNSDADVIKYGRLLVDKGAQSVIVSLGGDG------AIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIAS 261 (306)
T ss_dssp TT-SCCCSHHHHHHHHHHHHHTTCSCEEEECGGGC------EEEECSSEEEEEECCCCCCCCCTTHHHHHHHHHHHHHHT
T ss_pred hC-CCCCCHHHHHHHHHHHHHcCCCEEEEccCCCc------eEEEeCCcEEEEeCCcccccCCcChHHHHHHHHHHHHHc
Confidence 98 54556677888899999999999999999987 777777777888888888899999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHhc
Q 010240 244 GSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 244 g~~l~~A~~~A~~~~~~~i~~ 264 (514)
|+++++|+++|+++++.+++.
T Consensus 262 g~~~~~a~~~A~a~aa~~v~~ 282 (306)
T 2jg5_A 262 GLSIEKAFQQAVACGTATAFD 282 (306)
T ss_dssp TCCHHHHHHHHHHHHHHHHTS
T ss_pred CCCHHHHHHHHHHHHHHHHcC
Confidence 999999999999998877765
No 38
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.77 E-value=1.4e-18 Score=171.12 Aligned_cols=160 Identities=14% Similarity=0.122 Sum_probs=124.0
Q ss_pred CcCEEEEcccC--C---HHHHHHHHHHHhc-CCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHH
Q 010240 89 QVDVVKTGMLP--S---TDLVKVLLQSLSE-FPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASA 162 (514)
Q Consensus 89 ~~~~i~~G~~~--~---~~~~~~~~~~~~~-~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~ 162 (514)
+++++.+|.+. . .+.+..+++.+++ .+. ++++||++++. +++. +.+ +++++++|+++||..|++.
T Consensus 114 ~~~~v~~g~~~~~~~~~~~~~~~~~~~a~~~~~~-~v~~D~~~~~~----~~~~---~~~-~~~l~~~dil~~N~~E~~~ 184 (296)
T 2qhp_A 114 NTRAVCFGSLAQRNEVSRATINRFLDTMPDIDGQ-LKIFDINLRQD----FYTK---EVL-RESFKRCNILKINDEELVT 184 (296)
T ss_dssp TEEEEEECSGGGSSHHHHHHHHHHHHHSCCTTSC-EEEEECCCCTT----CCCH---HHH-HHHHHHCSEEEEEHHHHHH
T ss_pred CCCEEEECChHhcChHHHHHHHHHHHHHHhcCCC-EEEEECcCCcc----ccCH---HHH-HHHHHHCCEEECCHHHHHH
Confidence 47888888753 2 2344555555554 344 49999987642 2232 233 3677899999999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHhc-CCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHH
Q 010240 163 LLGGMQVVTVADMCSAAKLLHNL-GPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAEL 241 (514)
Q Consensus 163 L~g~~~~~~~~~~~~~a~~l~~~-g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l 241 (514)
|+| ....+.++..++++++.++ |++.|++|.|+.| .+++++++.++++.++++++||+||||+|+|+|++.|
T Consensus 185 l~g-~~~~~~~~~~~~~~~l~~~~g~~~vvvt~G~~G------~~~~~~~~~~~~~~~~v~~vdttGAGD~f~a~~~~~l 257 (296)
T 2qhp_A 185 ISR-MFGYPGIDLQDKCWILLAKYNLKMLILTCGING------SYVFTPGVVSFQETPKVPVADTVGAGDSFTAAFCASI 257 (296)
T ss_dssp HHH-HTTCTTSCHHHHHHHHHHHTTCSEEEEECGGGC------EEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHH
T ss_pred Hhc-ccCCCCCCHHHHHHHHHHhcCCCEEEEeecCCC------eEEEECCeEEEeCCCCCccccCCCchHHHHHHHHHHH
Confidence 987 3222224566778888875 9999999999987 7778888888889888888999999999999999999
Q ss_pred HcCCCHHHHHHHHHHHHHHHHhc
Q 010240 242 AKGSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 242 ~~g~~l~~A~~~A~~~~~~~i~~ 264 (514)
++|+++++|+++|+.+++.+++.
T Consensus 258 ~~g~~~~~a~~~a~~~aa~~v~~ 280 (296)
T 2qhp_A 258 LNGKSVPEAHKLAVEVSAYVCTQ 280 (296)
T ss_dssp HHTCCHHHHHHHHHHHHHHHHTS
T ss_pred HcCCCHHHHHHHHHHHHHHHHcC
Confidence 99999999999999998887775
No 39
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=99.77 E-value=1.3e-17 Score=168.03 Aligned_cols=151 Identities=20% Similarity=0.193 Sum_probs=125.8
Q ss_pred CcCEEEEc-cc-CCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCC
Q 010240 89 QVDVVKTG-ML-PSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGG 166 (514)
Q Consensus 89 ~~~~i~~G-~~-~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~ 166 (514)
+++++.++ +. .+.+.+..+++.+++.+.+ +++||... . ..+++.+|+++||..|++.|+|
T Consensus 186 ~~~~v~~~g~~~~~~~~~~~~~~~a~~~g~~-v~~D~~~~------~----------~~~l~~~dil~pN~~Ea~~l~g- 247 (352)
T 4e84_A 186 QHDVVLMSDYAKGGLTHVTTMIEKARAAGKA-VLVDPKGD------D----------WARYRGASLITPNRAELREVVG- 247 (352)
T ss_dssp GCSEEEEECCSSSSCSSHHHHHHHHHHTTCE-EEEECCSS------C----------CSTTTTCSEECCBHHHHHHHHC-
T ss_pred cCCEEEEeCCCCCCHHHHHHHHHHHHhcCCE-EEEECCCc------c----------hhhccCCcEEcCCHHHHHHHhC-
Confidence 57888875 22 3344577888888888775 99998421 0 1467899999999999999998
Q ss_pred CCCCCHHHHHHHHHHHHh-cCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHHHcCC
Q 010240 167 MQVVTVADMCSAAKLLHN-LGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELAKGS 245 (514)
Q Consensus 167 ~~~~~~~~~~~~a~~l~~-~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~~g~ 245 (514)
...+.++..+++++|.+ .|++.|++|.|.+| .+++++++.++++.++++++||+||||+|+|+|++.|++|+
T Consensus 248 -~~~~~~~~~~~a~~l~~~~g~~~VvvT~G~~G------a~~~~~~~~~~~pa~~v~vvDttGAGDaF~ag~l~~l~~g~ 320 (352)
T 4e84_A 248 -QWKSEDDLRARVANLRAELDIDALLLTRSEEG------MTLFSAGGELHAPALAREVFDVSGAGDTVIATVATMLGAGV 320 (352)
T ss_dssp -CCSSHHHHHHHHHHHHHHHTCSEEEEECGGGC------EEEEETTEEEEECCCCSCCSCCTTHHHHHHHHHHHHHHTTC
T ss_pred -CCCCHHHHHHHHHHHHHHhCCCEEEEEcCCCc------EEEEECCceEEecCCCcCccCCccccHHHHHHHHHHHHcCC
Confidence 33456788888999975 69999999999988 78888888888999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHhc
Q 010240 246 PMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 246 ~l~~A~~~A~~~~~~~i~~ 264 (514)
++++|+++|++++..+++.
T Consensus 321 ~l~~al~~A~aaaa~~v~~ 339 (352)
T 4e84_A 321 PLVDAVVLANRAAGIVVGK 339 (352)
T ss_dssp CHHHHHHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHHHHhcC
Confidence 9999999999997777765
No 40
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=99.77 E-value=3.2e-18 Score=171.62 Aligned_cols=160 Identities=23% Similarity=0.265 Sum_probs=121.2
Q ss_pred CcCEEE-EcccC--CH---HHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHH
Q 010240 89 QVDVVK-TGMLP--ST---DLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASA 162 (514)
Q Consensus 89 ~~~~i~-~G~~~--~~---~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~ 162 (514)
+++.+. .|+.. ++ +.+..+++.+++.+.+ +++||+++.. .+...+......+.+++.+|+++||..|++.
T Consensus 152 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~-v~~Dp~~~~~---~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~ 227 (336)
T 4du5_A 152 SARHLHATGVFPAISATTLPAARKTMDLMRAAGRS-VSFDPNLRPT---LWATPELMRDAINDLATRADWVLPGMEEGRF 227 (336)
T ss_dssp TEEEEEEESSGGGSCTTHHHHHHHHHHHHHHTTCE-EEEECCCCGG---GSSSHHHHHHHHHHHHTTCSEECCBHHHHHH
T ss_pred cCCEEEEcCchhhCChHHHHHHHHHHHHHHHCCCE-EEEeCcCCch---hcCChHHHHHHHHHHHHhCCEEECCHHHHHH
Confidence 467776 45432 32 4556677777777765 9999986642 2222333334445788999999999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccC-CCCCCCCcchHHHHHHHHH
Q 010240 163 LLGGMQVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVN-TRNTHGTGCTLASCIAAEL 241 (514)
Q Consensus 163 L~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~GaGD~f~a~i~~~l 241 (514)
|+|. ++..++++.|.++|++.|++|.|..| .+++++++.++++.++++ ++|++||||+|+|+|++.|
T Consensus 228 l~g~------~~~~~~~~~l~~~g~~~vvvt~G~~G------~~~~~~~~~~~~~~~~v~~vvdttGAGDaf~a~~~~~l 295 (336)
T 4du5_A 228 LTGE------TTPEGVARFYRQLGAKLVVVKLGAEG------AYFDGEAGSGRVAGFPVAEVVDTVGAGDGFAVGVISAL 295 (336)
T ss_dssp HHCC------CSHHHHHHHHHHTTCSEEEEECGGGC------EEEEETTEEEEECCCCC-------CHHHHHHHHHHHHH
T ss_pred HhCC------CCHHHHHHHHHhcCCCEEEEEecCCc------eEEEECCeEEEeCCccCCCCCCCccchHHHHHHHHHHH
Confidence 9982 24567788899999999999999988 788888888889998887 8999999999999999999
Q ss_pred HcCCCHHHHHHHHHHHHHHHHhc
Q 010240 242 AKGSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 242 ~~g~~l~~A~~~A~~~~~~~i~~ 264 (514)
++|+++++|+++|++++..+++.
T Consensus 296 ~~g~~l~~a~~~A~~~aa~~v~~ 318 (336)
T 4du5_A 296 LDGLGVPEAVKRGAWIGARAVQV 318 (336)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHC-
T ss_pred HcCCCHHHHHHHHHHHHHHHhcc
Confidence 99999999999999998877765
No 41
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=99.77 E-value=3.8e-18 Score=169.65 Aligned_cols=154 Identities=19% Similarity=0.165 Sum_probs=123.2
Q ss_pred CcCEEEEcccCCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCCCC
Q 010240 89 QVDVVKTGMLPSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGGMQ 168 (514)
Q Consensus 89 ~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~ 168 (514)
..+.+.++...+.+.+..+++.+++.+.+ +++||+.. ...+.+ +.+++++|+++||..|++.|+|.
T Consensus 134 ~~~~v~~~~~~~~~~~~~~~~~a~~~g~~-v~~Dp~~~----------~~~~~~-~~ll~~~dil~~N~~E~~~l~g~-- 199 (317)
T 2nwh_A 134 ASDFLLCDANLPEDTLTALGLIARACEKP-LAAIAISP----------AKAVKL-KAALGDIDILFMNEAEARALTGE-- 199 (317)
T ss_dssp HCSEEEEETTSCHHHHHHHHHHHHHTTCC-EEEECCSH----------HHHGGG-TTTGGGCSEEEEEHHHHHHHHC---
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHhcCCe-EEEeCCCH----------HHHHHH-HHHhhhCeEecCCHHHHHHHhCC--
Confidence 36788876555678888899999887775 99999521 111223 36789999999999999999983
Q ss_pred CCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCC-eEEEEeecccCCCCCCCCcchHHHHHHHHHHcCCCH
Q 010240 169 VVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGE-DFHELRSSRVNTRNTHGTGCTLASCIAAELAKGSPM 247 (514)
Q Consensus 169 ~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~~g~~l 247 (514)
+.++..++++.|.++|++.|++|.|+.| .++++++ ..++++.++++++|++||||+|+|+|++.|++|+++
T Consensus 200 --~~~~~~~~~~~l~~~g~~~vvvt~G~~G------~~~~~~~~~~~~~~~~~v~~vdt~GAGDaf~a~~~~~l~~g~~~ 271 (317)
T 2nwh_A 200 --TAENVRDWPNILRKAGLSGGVVTRGASE------VVAFNGTEKAILHPPLIREVKDVTGAGDAMASGYLAAIAEGKTI 271 (317)
T ss_dssp ------CTTHHHHHHHTTCCCEEEEETTTE------EEEECSSCEEEECCCCSSSCSCCCCSSHHHHHHHHHHHHTTCCH
T ss_pred --ChhHHHHHHHHHHHcCCCEEEEEECCCc------EEEEcCCCceEEeCCCCccccCCCChhHHHHHHHHHHHHcCCCH
Confidence 2244566788888899999999999877 6777655 357788888888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhc
Q 010240 248 LSAVKVAKCFVETALDY 264 (514)
Q Consensus 248 ~~A~~~A~~~~~~~i~~ 264 (514)
++|+++|++++..+++.
T Consensus 272 ~~a~~~A~~~aa~~v~~ 288 (317)
T 2nwh_A 272 REALRQGAAAAAITVQS 288 (317)
T ss_dssp HHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 99999999998887775
No 42
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.76 E-value=6e-18 Score=170.69 Aligned_cols=170 Identities=12% Similarity=0.080 Sum_probs=128.2
Q ss_pred CcCEEEEc-ccC--C---HHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHH
Q 010240 89 QVDVVKTG-MLP--S---TDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASA 162 (514)
Q Consensus 89 ~~~~i~~G-~~~--~---~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~ 162 (514)
+++++.++ +.. + .+.+..+++.+++.+.+ +++||+++. .+++..........+++++|+++||..|++.
T Consensus 138 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~-v~~Dp~~~~----~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~ 212 (351)
T 2afb_A 138 GARWFHFSGITPPLGKELPLILEDALKVANEKGVT-VSCDLNYRA----RLWTKEEAQKVMIPFMEYVDVLIANEEDIEK 212 (351)
T ss_dssp TEEEEEEETTSGGGSTTHHHHHHHHHHHHHHHTCE-EEEECCCCT----TTCCHHHHHHHHHHHGGGCSEEEECHHHHHH
T ss_pred CCCEEEEeCcccccChhHHHHHHHHHHHHHHcCCE-EEEeCCCch----hcCChHHHHHHHHHHHhhCCEEEecHHHHHH
Confidence 57888775 322 2 25666777777776665 999998763 2334322333335789999999999999999
Q ss_pred hhCCCCCC---------CHHHHHHHHHHHHhc-CCCeEEEecccCCCCCCc--eEEEEeCCeEEEEeecccCCCCCCCCc
Q 010240 163 LLGGMQVV---------TVADMCSAAKLLHNL-GPRTVLVKGGDLPDSSDA--VDIFFDGEDFHELRSSRVNTRNTHGTG 230 (514)
Q Consensus 163 L~g~~~~~---------~~~~~~~~a~~l~~~-g~~~Vvvt~g~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~GaG 230 (514)
|+| .... +.++..+++++|.+. |++.|++|.|..|..... ..+++.+++.++++.++++++|++|||
T Consensus 213 l~g-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAG 291 (351)
T 2afb_A 213 VLG-ISVEGLDLKTGKLNREAYAKIAEEVTRKYNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEIHIVDRVGAG 291 (351)
T ss_dssp HHC-CCCSCC-------CHHHHHHHHHHHHHHHCCSEEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEEECSCCTTHH
T ss_pred HhC-CCcccccccccccchhhHHHHHHHHHHHcCCCEEEEEeCCcCccccccceeEEEeCCcEEEcCCCCCccCCCCCch
Confidence 998 4332 456778888899875 999999999886510000 025667777778888888888999999
Q ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhc
Q 010240 231 CTLASCIAAELAKGSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 231 D~f~a~i~~~l~~g~~l~~A~~~A~~~~~~~i~~ 264 (514)
|+|+|+|++.|++|+++++|+++|++++..+++.
T Consensus 292 DaF~ag~~~~l~~g~~l~~a~~~A~~~aa~~v~~ 325 (351)
T 2afb_A 292 DSFAGALIYGSLMGFDSQKKAEFAAAASCLKHTI 325 (351)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999998877765
No 43
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=99.76 E-value=2.6e-17 Score=164.59 Aligned_cols=153 Identities=17% Similarity=0.207 Sum_probs=125.7
Q ss_pred CcCEEEE-cccC---CHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcc---cceEEcCCHHHHH
Q 010240 89 QVDVVKT-GMLP---STDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLP---MADIVTPNVKEAS 161 (514)
Q Consensus 89 ~~~~i~~-G~~~---~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~---~~diitpN~~E~~ 161 (514)
+++++.+ |+.. +.+.+..+++.+++.+.+ +++||+. . .+. ++++ .+|+++||..|++
T Consensus 147 ~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~-v~~D~~~-----------~---~l~-~~l~~~~~~dil~~N~~E~~ 210 (330)
T 2jg1_A 147 KVEAVAISGSLPKGLNQDYYAQIIERCQNKGVP-VILDCSG-----------A---TLQ-TVLENPYKPTVIKPNISELY 210 (330)
T ss_dssp GCSEEEEESCCCBTSCTTHHHHHHHHHHTTTCC-EEEECCH-----------H---HHH-HHHTSSSCCSEECCBHHHHH
T ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCE-EEEECCc-----------H---HHH-HHHhccCCceEEEeCHHHHH
Confidence 5787775 6653 346778888888887776 9999841 1 233 3444 8999999999999
Q ss_pred HhhCCCCCC-CHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHH
Q 010240 162 ALLGGMQVV-TVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAE 240 (514)
Q Consensus 162 ~L~g~~~~~-~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~ 240 (514)
.|+| .... +.++..+++++|.++|++.|++|.|.+| .+++++++.++++.++++++||+||||+|+|+|++.
T Consensus 211 ~l~g-~~~~~~~~~~~~~~~~l~~~g~~~VvvT~G~~G------a~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~ 283 (330)
T 2jg1_A 211 QLLN-QPLDESLESLKQAVSQPLFEGIEWIIVSLGAQG------AFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSA 283 (330)
T ss_dssp HHTT-SCCCCCHHHHHHHHHSGGGTTCSEEEEECGGGC------EEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHH
T ss_pred HHhC-CCCCCCHHHHHHHHHHHHHcCCCEEEEeecCCc------eEEEeCCCEEEEeCCCccccCCCcHHHHHHHHHHHH
Confidence 9998 4333 5677888899998899999999999988 777887777888888888899999999999999999
Q ss_pred HHcCCCHHHHHHHHHHHHHHHHhc
Q 010240 241 LAKGSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 241 l~~g~~l~~A~~~A~~~~~~~i~~ 264 (514)
|++|+++++|+++|++++..+++.
T Consensus 284 l~~g~~l~~al~~A~a~aa~~v~~ 307 (330)
T 2jg1_A 284 ILNHENDHDLLKKANTLGMLNAQE 307 (330)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHTS
T ss_pred HHcCCCHHHHHHHHHHHHHHHhcC
Confidence 999999999999999998877765
No 44
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=99.76 E-value=1.8e-17 Score=165.25 Aligned_cols=156 Identities=19% Similarity=0.238 Sum_probs=124.9
Q ss_pred CcCEEEE-cccC---CHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhh
Q 010240 89 QVDVVKT-GMLP---STDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALL 164 (514)
Q Consensus 89 ~~~~i~~-G~~~---~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~ 164 (514)
.++++.+ |+.. +.+.+..+++.+++.+.+ +++||+. .....+...+ +.+|+++||..|++.|+
T Consensus 129 ~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~-v~~Dp~~-----------~~~~~~l~~~-~~~dil~~N~~E~~~l~ 195 (323)
T 2f02_A 129 QAEIVTISGSLAKGLPSDFYQELVQKAHAQEVK-VLLDTSG-----------DSLRQVLQGP-WKPYLIKPNLEELEGLL 195 (323)
T ss_dssp TCSEEEEESCCCBTSCTTHHHHHHHHHHHTTCE-EEEECCT-----------HHHHHHHHSS-CCCSEECCBHHHHHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHHHCCCE-EEEECCh-----------HHHHHHHhcc-CCCeEEecCHHHHHHHh
Confidence 5788775 7653 246778888888887765 9999851 1122211111 68999999999999999
Q ss_pred CCCCCC-CH-HHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHHH
Q 010240 165 GGMQVV-TV-ADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELA 242 (514)
Q Consensus 165 g~~~~~-~~-~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~ 242 (514)
| .... +. ++..+++++|.++|++.|++|.|+.| .+++++++.++++.++++++|++||||+|+|+|++.|+
T Consensus 196 g-~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G------~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~ 268 (323)
T 2f02_A 196 G-QDFSENPLAAVQTALTKPMFAGIEWIVISLGKDG------AIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLA 268 (323)
T ss_dssp T-CCCCSSCHHHHHHHHTSGGGTTCSEEEEECGGGC------EEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHH
T ss_pred C-CCCCCCcHHHHHHHHHHHHHcCCCEEEEeecCCc------eEEEeCCCEEEEcCCCccccCCccHHHHHHHHHHHHHH
Confidence 8 3332 33 56778888898889999999999987 77788777788888888889999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHhc
Q 010240 243 KGSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 243 ~g~~l~~A~~~A~~~~~~~i~~ 264 (514)
+|+++++|+++|+++++.+++.
T Consensus 269 ~g~~~~~a~~~A~~~aa~~v~~ 290 (323)
T 2f02_A 269 KDAPAAELLKWGMAAGMANAQE 290 (323)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHS
T ss_pred cCCCHHHHHHHHHHHHHHHHcC
Confidence 9999999999999998888775
No 45
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=99.75 E-value=8.5e-18 Score=168.20 Aligned_cols=163 Identities=15% Similarity=0.133 Sum_probs=127.4
Q ss_pred CcCEEEE-cccC----CHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHh
Q 010240 89 QVDVVKT-GMLP----STDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASAL 163 (514)
Q Consensus 89 ~~~~i~~-G~~~----~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L 163 (514)
+++.+.+ |+.. +.+.+..+++.+++.+.+ +++||+++.. .+.+++....+.+.+++++|+++||..|++.|
T Consensus 138 ~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~-v~~D~~~~~~---~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l 213 (332)
T 2qcv_A 138 RSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVK-VVFELDYRPY---SWETPEETAVYYSLVAEQSDIVIGTREEFDVL 213 (332)
T ss_dssp TEEEEEEEGGGGSSTTHHHHHHHHHHHHHHTTCE-EEEECCCCGG---GSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHH
T ss_pred cCCEEEEeCccccCchhHHHHHHHHHHHHHCCCE-EEEcCcCchh---hcCCHHHHHHHHHHHHHhCCEEEccHHHHHHH
Confidence 4677664 5532 235677778888877765 9999987532 12233333444457889999999999999999
Q ss_pred hCCCCCCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeC-CeEEEEeecccCCCCCCCCcchHHHHHHHHHH
Q 010240 164 LGGMQVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDG-EDFHELRSSRVNTRNTHGTGCTLASCIAAELA 242 (514)
Q Consensus 164 ~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~ 242 (514)
+| .... ++..+++++|.++|++.|++|.|++| .+++.+ ++.++++.++++++|++||||+|+|+|++.|+
T Consensus 214 ~g-~~~~--~~~~~~~~~l~~~g~~~vvvt~G~~G------~~~~~~~~~~~~~~~~~v~vvdt~GAGDaf~a~~~~~l~ 284 (332)
T 2qcv_A 214 EN-RTEK--GDNDETIRYLFKHSPELIVIKHGVEG------SFAYTKAGEAYRGYAYKTKVLKTFGAGDSYASAFLYALI 284 (332)
T ss_dssp TT-CSSC--CCHHHHHHHHTTSSCSEEEEECGGGC------EEEEETTSCEEEECCBCCCCSCCTTHHHHHHHHHHHHHH
T ss_pred hC-CCcC--CCHHHHHHHHHHcCCCEEEEEECCcc------eEEEecCCceEEcCCCCccccCCCCcHHHHHHHHHHHHH
Confidence 98 3221 23456788898899999999999987 777776 55778888888889999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHhc
Q 010240 243 KGSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 243 ~g~~l~~A~~~A~~~~~~~i~~ 264 (514)
+|+++++|+++|+++++.+++.
T Consensus 285 ~g~~~~~a~~~A~~~aa~~v~~ 306 (332)
T 2qcv_A 285 SGKGIETALKYGSASASIVVSK 306 (332)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHC
T ss_pred cCCCHHHHHHHHHHHHHHHHcc
Confidence 9999999999999998888775
No 46
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=99.75 E-value=4.8e-17 Score=161.02 Aligned_cols=169 Identities=23% Similarity=0.271 Sum_probs=129.7
Q ss_pred CHHHHHHHHHHHHcCC-CcCEEEE-cccC---CHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhc
Q 010240 73 PEDFVAAQLKSVLSDM-QVDVVKT-GMLP---STDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLL 147 (514)
Q Consensus 73 ~~~~~~~~l~~l~~~~-~~~~i~~-G~~~---~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll 147 (514)
+++.+.+.++.+.+.+ + +++.+ |++. +.+.+..+++.+++.+.+ +++||+.. .+.+.+.
T Consensus 114 ~~~~~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~-v~~D~~~~--------------~~~~~l~ 177 (309)
T 3cqd_A 114 NEDEFRQLEEQVLEIESG-AILVISGSLPPGVKLEKLTQLISAAQKQGIR-CIVDSSGE--------------ALSAALA 177 (309)
T ss_dssp CHHHHHHHHHHHHTSCTT-CEEEEESCCCTTCCHHHHHHHHHHHHTTTCE-EEEECCHH--------------HHHHHTT
T ss_pred CHHHHHHHHHHHHHhhcC-CEEEEECCCCCCCCHHHHHHHHHHHHHcCCe-EEEECChH--------------HHHHHHH
Confidence 3444443333333322 4 77654 5553 356777888888887765 99998521 2333344
Q ss_pred ccc-eEEcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHhcC-CCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCC
Q 010240 148 PMA-DIVTPNVKEASALLGGMQVVTVADMCSAAKLLHNLG-PRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRN 225 (514)
Q Consensus 148 ~~~-diitpN~~E~~~L~g~~~~~~~~~~~~~a~~l~~~g-~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d 225 (514)
+.+ |+++||..|++.|+| ....+.++..+++++|.++| ++.|++|.|..| .+++++++.++++.++++++|
T Consensus 178 ~~~~dil~~N~~E~~~l~g-~~~~~~~~~~~~~~~l~~~g~~~~vvvt~G~~G------~~~~~~~~~~~~~~~~v~~vd 250 (309)
T 3cqd_A 178 IGNIELVKPNQKELSALVN-RELTQPDDVRKAAQEIVNSGKAKRVVVSLGPQG------ALGVDSENCIQVVPPPVKSQS 250 (309)
T ss_dssp TCCBSEECCBHHHHHHHHT-SCCCSTTHHHHHHHHHHHTTSBSCEEEECGGGC------EEEECSSCEEEECCCSCCCCC
T ss_pred hCCCEEEeeCHHHHHHHhC-CCCCCHHHHHHHHHHHHHcCCCCEEEEEecCCc------eEEEECCceEEEeCCccccCC
Confidence 788 999999999999998 44445567788899999999 999999999987 777777777788888888899
Q ss_pred CCCCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhc
Q 010240 226 THGTGCTLASCIAAELAKGSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 226 ~~GaGD~f~a~i~~~l~~g~~l~~A~~~A~~~~~~~i~~ 264 (514)
++||||+|+|+|++.|++|+++++|+++|+++++.+++.
T Consensus 251 ttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~~~~ 289 (309)
T 3cqd_A 251 TVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAATLN 289 (309)
T ss_dssp CTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTC-
T ss_pred CcCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999998877765
No 47
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=99.75 E-value=5.4e-18 Score=169.50 Aligned_cols=159 Identities=19% Similarity=0.174 Sum_probs=125.8
Q ss_pred CcCEEEE-cccC-CH---HHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHh
Q 010240 89 QVDVVKT-GMLP-ST---DLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASAL 163 (514)
Q Consensus 89 ~~~~i~~-G~~~-~~---~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L 163 (514)
+++.+.+ |+.. ++ +.+..+++.+++.+.+ +++||+.+.. .+.++...+.+ +.+++++|+++||..|++.|
T Consensus 130 ~~~~v~~sg~~~~~~~~~~~~~~~~~~a~~~g~~-v~~D~~~~~~---~~~~~~~~~~~-~~~l~~~dil~~N~~E~~~l 204 (330)
T 3iq0_A 130 DCTHFHIMGSSLFSFHMVDAVKKAVTIVKANGGV-ISFDPNIRKE---MLDIPEMRDAL-HFVLELTDIYMPSEGEVLLL 204 (330)
T ss_dssp TEEEEEEEGGGCSSHHHHHHHHHHHHHHHHTTCE-EEEECCCCGG---GGGSHHHHHHH-HHHHHTCSEECCBGGGTTTT
T ss_pred cCCEEEEechhhcCcchHHHHHHHHHHHHHcCCE-EEEcCCCCcc---ccCcHHHHHHH-HHHHhhCCEEecCHHHHHHH
Confidence 4677766 5432 22 4456677777777765 9999976531 12223333333 47889999999999999999
Q ss_pred hCCCCCCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHHHc
Q 010240 164 LGGMQVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELAK 243 (514)
Q Consensus 164 ~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~~ 243 (514)
+| . ++..++++.|.+.|++.|++|.|..| .+++++++.++++.++++++|++||||+|+|+|++.|++
T Consensus 205 ~g-~-----~~~~~~~~~l~~~g~~~vvvT~G~~G------~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~ 272 (330)
T 3iq0_A 205 SP-H-----STPERAIAGFLEEGVKEVIVKRGNQG------ASYYSANEQFHVESYPVEEVDPTGAGDCFGGAWIACRQL 272 (330)
T ss_dssp CS-C-----SSHHHHHHHHHHHTCSEEEEECGGGC------EEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHT
T ss_pred hC-C-----CCHHHHHHHHHHcCCCEEEEEeCCCc------eEEEECCceEEecCCCCccCCCCChHHHHHHHHHHHHHc
Confidence 98 2 24567788898899999999999988 788887788889998888899999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHhc
Q 010240 244 GSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 244 g~~l~~A~~~A~~~~~~~i~~ 264 (514)
|+++++|+++|++++..+++.
T Consensus 273 g~~~~~a~~~A~~~aa~~v~~ 293 (330)
T 3iq0_A 273 GFDAHRALQYANACGALAVTR 293 (330)
T ss_dssp TCCHHHHHHHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHHHHHcC
Confidence 999999999999997777665
No 48
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=99.75 E-value=2.3e-18 Score=163.05 Aligned_cols=184 Identities=18% Similarity=0.145 Sum_probs=136.7
Q ss_pred CCHHHHHHHHHhCCCCEEEEEc------CCCCHHHHHHHHHHHHHHH-hhcCceEEEcC---cHHHHHhCCCCeEEeCCC
Q 010240 318 RSITDAVKAALEGGATIIQLRE------KDADTRGFLEAAKACLQIC-CVHGVPLLIND---RIDIALACDADGVHLGQS 387 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~------~~~~~~~~~~~~~~~~~~~-~~~~~~l~v~~---~~~~a~~~ga~gvhl~~~ 387 (514)
..+.+.++.+.++|++++|++. +..+ .-.+.++++++.+ ..+.+.+++|+ +++.+.++|+|++|++..
T Consensus 23 ~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~--~~~~~i~~l~~~~~~~~~v~l~vnd~~~~v~~~~~~Gad~v~vh~~ 100 (230)
T 1rpx_A 23 SKLGEQVKAIEQAGCDWIHVDVMDGRFVPNIT--IGPLVVDSLRPITDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCE 100 (230)
T ss_dssp GGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBC--CCHHHHHHHGGGCCSCEEEEEESSSHHHHHHHHHHTTCSEEEEECS
T ss_pred HHHHHHHHHHHHCCCCEEEEeeccCCcccccc--cCHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEEEec
Confidence 4678889999999999999995 2222 1135555665554 23456677786 677889999999987776
Q ss_pred --C--CCHHHHHhhcCCCcEEEEec--CCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-----CC
Q 010240 388 --D--MPARTARALLGPDKIIGVSC--KTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-----KL 456 (514)
Q Consensus 388 --~--~~~~~~~~~~~~~~~ig~s~--~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-----~~ 456 (514)
. .....++...+.+..+|.++ +|+.|..++...++|||.+..++|..+.+.....+++.++++++.. ++
T Consensus 101 ~~~~~~~~~~~~~~~~~g~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~ 180 (230)
T 1rpx_A 101 QSSTIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNP 180 (230)
T ss_dssp TTTCSCHHHHHHHHHHTTSEEEEEECTTCCGGGGTTTTTTCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCC
T ss_pred CccchhHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCc
Confidence 3 22234444444577888888 5677777777789999976655553333223334567778777765 79
Q ss_pred CEEEECCCCcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHH
Q 010240 457 PVVAIGGIGISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVL 506 (514)
Q Consensus 457 pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~ 506 (514)
|+++.|||+++|+.+++++|++ +|++||+|++++||.+++++|++.+
T Consensus 181 pi~v~GGI~~~n~~~~~~aGad---~vvvgSaI~~a~dp~~a~~~l~~~~ 227 (230)
T 1rpx_A 181 WIEVDGGVGPKNAYKVIEAGAN---ALVAGSAVFGAPDYAEAIKGIKTSK 227 (230)
T ss_dssp EEEEESSCCTTTHHHHHHHTCC---EEEESHHHHTSSCHHHHHHHHHTCC
T ss_pred eEEEECCCCHHHHHHHHHcCCC---EEEEChhhhCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999 9999999999999999999987644
No 49
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.75 E-value=4.5e-18 Score=168.64 Aligned_cols=152 Identities=20% Similarity=0.251 Sum_probs=121.8
Q ss_pred CcCEEEEcccCCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCCCC
Q 010240 89 QVDVVKTGMLPSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGGMQ 168 (514)
Q Consensus 89 ~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~ 168 (514)
.++++.++...+.+.+. +.+++.+.+ +++||++.. .+...+++++|+++||..|++.|+| .+
T Consensus 140 ~~~~v~~~~~~~~~~~~---~~a~~~~~~-v~~Dp~~~~-------------~~~~~ll~~~dil~~N~~E~~~l~g-~~ 201 (311)
T 1vm7_A 140 ESDILLLQNEIPFETTL---ECAKRFNGI-VIFDPAPAQ-------------GINEEIFQYLDYLTPNEKEIEALSK-DF 201 (311)
T ss_dssp TCSEEEECSSSCHHHHH---HHHHHCCSE-EEECCCSCT-------------TCCGGGGGGCSEECCBHHHHHHHHH-HH
T ss_pred cCCEEEEeCCCCHHHHH---HHHHHcCCE-EEEeCcchh-------------hhhHHHHhhCCEEeCCHHHHHHHhC-CC
Confidence 57888887765554433 336666654 999997531 1123678999999999999999987 32
Q ss_pred CCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHHHcCCCHH
Q 010240 169 VVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELAKGSPML 248 (514)
Q Consensus 169 ~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~~g~~l~ 248 (514)
..+.++..+++++|.++|++.|++|.|+.| .+++++++.++++.++++++|++||||+|+|+|+++|++|++++
T Consensus 202 ~~~~~~~~~~~~~l~~~g~~~vvvT~G~~G------~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~~~ 275 (311)
T 1vm7_A 202 FGEFLTVEKAAEKFLELGVKNVIVKLGDKG------VLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEGKNPE 275 (311)
T ss_dssp HSCCCCHHHHHHHHHHTTCSEEEEECGGGC------EEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHH
T ss_pred CCChhHHHHHHHHHHHcCCCEEEEEECCCC------eEEEeCCceEEecCCCcccCCCCccHHHHHHHHHHHHHCCCCHH
Confidence 222245677888999999999999999987 77777777778888888888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhc
Q 010240 249 SAVKVAKCFVETALDY 264 (514)
Q Consensus 249 ~A~~~A~~~~~~~i~~ 264 (514)
+|+++|+++++.+++.
T Consensus 276 ~a~~~A~~~aa~~v~~ 291 (311)
T 1vm7_A 276 EAVIFGTAAAAISVTR 291 (311)
T ss_dssp HHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHhCc
Confidence 9999999998877765
No 50
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=99.74 E-value=6.8e-17 Score=159.97 Aligned_cols=153 Identities=23% Similarity=0.320 Sum_probs=125.5
Q ss_pred CcCEEE-EcccC---CHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhccc--ceEEcCCHHHHHH
Q 010240 89 QVDVVK-TGMLP---STDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPM--ADIVTPNVKEASA 162 (514)
Q Consensus 89 ~~~~i~-~G~~~---~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~--~diitpN~~E~~~ 162 (514)
..+.+. .|++. +.+.+..+++.+++.+.+ +++||. . ..+. ++++. +|+++||..|++.
T Consensus 130 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~-v~~D~~-----------~---~~l~-~~l~~~~~dil~~N~~E~~~ 193 (309)
T 3umo_A 130 SGAILVISGSLPPGVKLEKLTQLISAAQKQGIR-CIVDSS-----------G---EALS-AALAIGNIELVKPNQKELSA 193 (309)
T ss_dssp TTCEEEEESCCCTTCCHHHHHHHHHHHHHTTCE-EEEECC-----------H---HHHH-HHTSSCCBSEECCBHHHHHH
T ss_pred CCCEEEEEccCCCCCCHHHHHHHHHHHHhcCCE-EEEECC-----------c---HHHH-HHhccCCCeEEEeCHHHHHH
Confidence 455554 45543 457788888888888765 999983 1 2233 56666 5999999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHhcCC-CeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHH
Q 010240 163 LLGGMQVVTVADMCSAAKLLHNLGP-RTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAEL 241 (514)
Q Consensus 163 L~g~~~~~~~~~~~~~a~~l~~~g~-~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l 241 (514)
|+| ....+.++..+++++|.+++. +.|++|.|.+| .+++++++.++++.++++++|++||||+|+|+|+++|
T Consensus 194 l~g-~~~~~~~~~~~~~~~l~~~g~~~~vvvt~G~~G------~~~~~~~~~~~~~~~~v~vvdttGAGD~f~a~~~~~l 266 (309)
T 3umo_A 194 LVN-RELTQPDDVRKAAQEIVNSGKAKRVVVSLGPQG------ALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKL 266 (309)
T ss_dssp HHT-SCCCSTTHHHHHHHHHHHTTSBSCEEEECGGGC------EEEECSSCEEEECCCSCCCSCCTTHHHHHHHHHHHHH
T ss_pred HhC-CCCCCHHHHHHHHHHHHHcCCCcEEEEEcCccc------EEEEECCcEEEEeCCCcCCCCCcChHHHHHHHHHHHH
Confidence 998 555555788889999999987 79999999988 7888887888899888888999999999999999999
Q ss_pred HcCCCHHHHHHHHHHHHHHHHhc
Q 010240 242 AKGSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 242 ~~g~~l~~A~~~A~~~~~~~i~~ 264 (514)
++|+++++|+++|+.++..++++
T Consensus 267 ~~g~~~~~a~~~A~~~aa~~v~~ 289 (309)
T 3umo_A 267 AENASLEEMVRFGVAAGSAATLN 289 (309)
T ss_dssp HTTCCHHHHHHHHHHHHHHHTTS
T ss_pred HcCCCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999997777664
No 51
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=99.74 E-value=4.1e-17 Score=162.37 Aligned_cols=166 Identities=21% Similarity=0.201 Sum_probs=125.5
Q ss_pred cCHHHHHHHHHHHHcC-CCcCEEEE-cccC---CHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhh
Q 010240 72 VPEDFVAAQLKSVLSD-MQVDVVKT-GMLP---STDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENL 146 (514)
Q Consensus 72 ~~~~~~~~~l~~l~~~-~~~~~i~~-G~~~---~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~l 146 (514)
++++.+.+.++.+.+. .+++++.+ |++. +.+.+..+++.+++.+.+ +++||.. +.+.+.+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~-v~~D~~~--------------~~l~~~l 179 (320)
T 3ie7_A 115 VSQTNKDNLLKQIAKKVKKEDMVVIAGSPPPHYTLSDFKELLRTVKATGAF-LGCDNSG--------------EYLNLAV 179 (320)
T ss_dssp CCHHHHHHHHHHHHHHCCTTCEEEEESCCCTTCCHHHHHHHHHHHHHHTCE-EEEECCH--------------HHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCE-EEEECCh--------------HHHHHHH
Confidence 4455555444444332 26888887 7764 346778888888877765 9999831 2333233
Q ss_pred cccceEEcCCHHHHHHhhCCCCCC-CHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCC
Q 010240 147 LPMADIVTPNVKEASALLGGMQVV-TVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRN 225 (514)
Q Consensus 147 l~~~diitpN~~E~~~L~g~~~~~-~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d 225 (514)
.+.+|+++||..|++.|+| .... +.+++. ++.+. ++.|++|.|..| .+++++++.++++.++++++|
T Consensus 180 ~~~~dil~~N~~E~~~l~g-~~~~~~~~~~~----~~~~~-~~~vvvt~G~~G------~~~~~~~~~~~~~~~~v~vvd 247 (320)
T 3ie7_A 180 EMGVDFIKPNEDEVIAILD-EKTNSLEENIR----TLAEK-IPYLVVSLGAKG------SICAHNGKLYQVIPPKVQERN 247 (320)
T ss_dssp HHCCSEECCBTTGGGGGSC-TTCCCHHHHHH----HHTTT-CSEEEEECGGGC------EEEEETTEEEEEECCCCCCSC
T ss_pred hcCCeEEeeCHHHHHHHhC-CCcCCCHHHHH----HHHhh-CCEEEEEcCCCc------eEEEeCCcEEEEeCCccCCCC
Confidence 3489999999999999998 4333 233333 33333 889999999988 788888888889998888899
Q ss_pred CCCCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhc
Q 010240 226 THGTGCTLASCIAAELAKGSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 226 ~~GaGD~f~a~i~~~l~~g~~l~~A~~~A~~~~~~~i~~ 264 (514)
++||||+|+|+|+++|++|+++++|+++|+++++.+++.
T Consensus 248 ttGAGDaF~ag~~~~l~~g~~~~~a~~~A~a~aa~~v~~ 286 (320)
T 3ie7_A 248 DTGAGDVFVGAFIAGLAMNMPITETLKVATGCSASKVMQ 286 (320)
T ss_dssp CTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTS
T ss_pred CcCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999998877775
No 52
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=99.74 E-value=1.8e-17 Score=166.77 Aligned_cols=171 Identities=15% Similarity=0.141 Sum_probs=128.8
Q ss_pred CcCEEEEc-ccC--CH---HHHHHHHHHHhcCCCCcEEEecceecCCCCCCCCh---hHHHHHHHhhcccceEEcCCHHH
Q 010240 89 QVDVVKTG-MLP--ST---DLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGP---STITGLRENLLPMADIVTPNVKE 159 (514)
Q Consensus 89 ~~~~i~~G-~~~--~~---~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~---~~~~~l~~~ll~~~diitpN~~E 159 (514)
+++++.++ +.. ++ +.+..+++.+++.+.+ +++||+++. .++.. .......+++++++|+++||..|
T Consensus 129 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~-v~~D~~~r~----~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E 203 (346)
T 3ktn_A 129 EVDMVHICGISLSLTEKTRDAALILAQKAHAYQKK-VCFDFNYRP----SLNTANSALFMRQQYERILPYCDIVFGSRRD 203 (346)
T ss_dssp TCSEEEECTHHHHHCHHHHHHHHHHHHHHHHTTCE-EEEECCCCG----GGCCHHHHHHHHHHHHHHGGGCSEEECCHHH
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHHHHcCCE-EEEeCCCCh----HHcCCccHHHHHHHHHHHHHhCCEEEccHHH
Confidence 57888874 321 33 4566777777777765 999998764 23332 22223344788999999999999
Q ss_pred HHHhhCCC-C--CCCHHHHHHHHHHHHhc-CCCeEEEecccCCCCCC-ceEEEEeCCeEEEEeecccCCCCCCCCcchHH
Q 010240 160 ASALLGGM-Q--VVTVADMCSAAKLLHNL-GPRTVLVKGGDLPDSSD-AVDIFFDGEDFHELRSSRVNTRNTHGTGCTLA 234 (514)
Q Consensus 160 ~~~L~g~~-~--~~~~~~~~~~a~~l~~~-g~~~Vvvt~g~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~ 234 (514)
++.|+|.. . ..+.++..+++++|.+. |++.|++|.|..|.... ...+++++++.++++.++++++|++||||+|+
T Consensus 204 ~~~l~g~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ 283 (346)
T 3ktn_A 204 LVELLGFIPREDLEGEAQETELIQRFMSQYNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGAGDAYA 283 (346)
T ss_dssp HHHTSCCCCCTTSCHHHHHHHHHHHHHHHHTCSEEEEEEEEECSSCEEEEEEEECSSCEEECCCEECCCSCCTTHHHHHH
T ss_pred HHHHhCCCCCccccchHHHHHHHHHHHHhcCCCEEEEecCccccccCcceEEEEECCceEEeCCCccccCCCCchhHHHH
Confidence 99999832 1 22456788889999875 99999999877552221 11456666777888888888899999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHhc
Q 010240 235 SCIAAELAKGSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 235 a~i~~~l~~g~~l~~A~~~A~~~~~~~i~~ 264 (514)
|+|++.|++|+++++|+++|++++..+++.
T Consensus 284 ag~~~~l~~g~~l~~a~~~A~a~aa~~v~~ 313 (346)
T 3ktn_A 284 AGILYGYSQNWSLEKAVTFATVNGVLAHTI 313 (346)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999997777664
No 53
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=99.74 E-value=2.4e-17 Score=163.98 Aligned_cols=158 Identities=16% Similarity=0.133 Sum_probs=122.6
Q ss_pred cCEEEEc-ccC----CHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhh
Q 010240 90 VDVVKTG-MLP----STDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALL 164 (514)
Q Consensus 90 ~~~i~~G-~~~----~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~ 164 (514)
++.+.++ +.. ..+....+++.+++ +.. +++||+++.. .+.++.......+++++++|+++||..|++.|+
T Consensus 136 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~-v~~D~~~~~~---~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~ 210 (319)
T 3pl2_A 136 ADILWFTLTGFSEEPSRGTHREILTTRAN-RRH-TIFDLDYRPM---FWESPEEATKQAEWALQHSTVAVGNKEECEIAV 210 (319)
T ss_dssp CSEEEEEGGGGSSTTHHHHHHHHHHHHTT-CSC-EEEECCCCGG---GSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHH
T ss_pred CCEEEEecccccCchhHHHHHHHHHHHHH-CCc-EEEeCCCChh---hcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHc
Confidence 6777664 321 12334555555554 444 8999976642 233344434444578999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHHHcC
Q 010240 165 GGMQVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELAKG 244 (514)
Q Consensus 165 g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~~g 244 (514)
|. ++..++++.|.++|++.|++|.|..| .+++++++.++++.++++++|++||||+|+|+|++.|++|
T Consensus 211 g~------~~~~~~~~~l~~~g~~~vvvt~G~~G------~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g 278 (319)
T 3pl2_A 211 GE------TEPERAGRALLERGVELAIVKQGPKG------VMAMTKDETVEVPPFFVDVINGLGAGDAFGGALCHGLLSE 278 (319)
T ss_dssp SC------CSHHHHHHHHHHTTCSEEEEEEETTE------EEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTT
T ss_pred CC------CCHHHHHHHHHhcCCCEEEEEECCCC------eEEEECCceEEeCCcccCCCCCcCchHHHHHHHHHHHHcC
Confidence 82 24567788898899999999999977 7788777788899988888999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhc
Q 010240 245 SPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 245 ~~l~~A~~~A~~~~~~~i~~ 264 (514)
+++++|+++|++++..+++.
T Consensus 279 ~~~~~a~~~A~~~aa~~v~~ 298 (319)
T 3pl2_A 279 WPLEKVLRFANTAGALVASR 298 (319)
T ss_dssp CCHHHHHHHHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHHHHHHhc
Confidence 99999999999997777664
No 54
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=99.73 E-value=1.5e-17 Score=159.34 Aligned_cols=169 Identities=18% Similarity=0.141 Sum_probs=120.2
Q ss_pred HHcCCCcCEEEEcccCCHH---HHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHH
Q 010240 84 VLSDMQVDVVKTGMLPSTD---LVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEA 160 (514)
Q Consensus 84 l~~~~~~~~i~~G~~~~~~---~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~ 160 (514)
+.+..++-+|.+|++ +.+ .+..+.+.+++.+.+ +|+|||+.... .+..+....+. . ..+++||||..|+
T Consensus 55 ~~~~a~alvIn~G~l-~~~~~~~~~~a~~~a~~~~~P-vVlDPVg~gas---~~r~~~~~~Ll-~--~~~~VItpN~~E~ 126 (273)
T 3dzv_A 55 MFQQTSALVLNLGHL-SQEREQSLLAASDYARQVNKL-TVVDLVGYGAS---DIRNEVGEKLV-H--NQPTVVKGNLSEM 126 (273)
T ss_dssp HHTTCSEEEEECCSC-CHHHHHHHHHHHHHHHHTTCC-EEEECTTTTSC---HHHHHHHHHHH-H--TCCSEEEEEHHHH
T ss_pred HHHHCCeEEEecCCC-ChHHHHHHHHHHHHHHHcCCc-EEEchhhcCCc---ccCHHHHHHHH-h--cCCcEECCCHHHH
Confidence 444445566667776 443 344455556676754 99999976332 12223333333 2 3679999999999
Q ss_pred HHhhCCCCC----CC------HH---HHHHHHHHHHhcCC-CeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCC
Q 010240 161 SALLGGMQV----VT------VA---DMCSAAKLLHNLGP-RTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNT 226 (514)
Q Consensus 161 ~~L~g~~~~----~~------~~---~~~~~a~~l~~~g~-~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 226 (514)
++|+|.... ++ .+ +..++++++.+++. ..|++||.. ++++++++.+.++......-.+
T Consensus 127 ~~L~g~~~~~~GVds~~~~~~~~~~~d~~~aa~~la~~~~~~~VvlkG~~--------D~i~dg~~~~~~~~G~~~~~~v 198 (273)
T 3dzv_A 127 RTFCQLVSHGRGVDGSPLDQSEEAIEELIQALRQQTQKFPQTVFLATGIQ--------DVLVSQEQVIVLQNGVPELDCF 198 (273)
T ss_dssp HHHTTCCCC-------CGGGSHHHHHHHHHHHHHHHHHSTTCEEEEESSS--------EEEECSSCEEEECCCCGGGGSS
T ss_pred HHHhCCcccccccccccccchhhhhHHHHHHHHHHHHHhCCeEEEEECCe--------eEEEcCCEEEEeCCCCcccCCc
Confidence 999983211 11 23 67788999988877 899999987 8888877766665543332357
Q ss_pred CCCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhccccc
Q 010240 227 HGTGCTLASCIAAELAKGSPMLSAVKVAKCFVETALDYSKDI 268 (514)
Q Consensus 227 ~GaGD~f~a~i~~~l~~g~~l~~A~~~A~~~~~~~i~~~~~~ 268 (514)
+|+||+|+|+++++|++|.++.+|+..|..+...+.+.+.+.
T Consensus 199 ~GtGc~Ls~~Iaa~lA~g~~~~~Aa~~A~~~~~~Age~A~~~ 240 (273)
T 3dzv_A 199 TGTGDLVGALVAALLGEGNAPMTAAVAAVSYFNLCGEKAKTK 240 (273)
T ss_dssp TTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999988888876543
No 55
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=99.72 E-value=3.9e-18 Score=171.16 Aligned_cols=162 Identities=12% Similarity=0.104 Sum_probs=112.5
Q ss_pred CcCEEEEcc--cCC---HHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHh
Q 010240 89 QVDVVKTGM--LPS---TDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASAL 163 (514)
Q Consensus 89 ~~~~i~~G~--~~~---~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L 163 (514)
+++.+.++. +.+ .+.+..+++.+++.+.+ +++||+++.. .+.+........+.+++.+|+|+||..|++.|
T Consensus 129 ~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~g~~-v~~Dp~~~~~---~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l 204 (338)
T 3ljs_A 129 DALIFHACSNSMTDADIAEVTFEGMRRAQAAGAI-VSFDLNFRPM---LWPNGENPASRLWKGLSLADVVKLSSEELDYL 204 (338)
T ss_dssp TEEEEEEEGGGGSSHHHHHHHHHHHHHHHHTTCE-EEEECCCCGG---GSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHH
T ss_pred CCCEEEECChHhcCchHHHHHHHHHHHHHHcCCE-EEEECCCChh---hcCCHHHHHHHHHHHHhhCCEEEecHHHHHHH
Confidence 467776642 233 35566677777777765 9999987752 22222222333447889999999999999999
Q ss_pred hCCCCCCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHHHc
Q 010240 164 LGGMQVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELAK 243 (514)
Q Consensus 164 ~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~~ 243 (514)
+| ...... .+++++|.+.|++.|++|.|..| .+++++++.++++.++++++||+||||+|+|+|++.|++
T Consensus 205 ~g-~~~~~~---~~~~~~l~~~g~~~vvvT~G~~G------~~~~~~~~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~ 274 (338)
T 3ljs_A 205 AN-TLAADA---NAVIQQLWQGRAQLLLVTDAAGP------VHWYTRTAGGEVPTFRVQVQDSNAAGDAFVGGMLYTFAQ 274 (338)
T ss_dssp HH-HHTSCH---HHHHHHHTTTTCCEEEEEETTEE------EEEEESSCEEEECC-----------CHHHHHHHHHHHHH
T ss_pred hC-CCChhH---HHHHHHHHhcCCCEEEEeeCCCc------eEEEECCceEEeCCCCCccCCCCCccHHHHHHHHHHHHh
Confidence 97 221111 23788898899999999999977 788888888889998888899999999999999999999
Q ss_pred C--------------CCHHHHHHHHHHHHHHHHhc
Q 010240 244 G--------------SPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 244 g--------------~~l~~A~~~A~~~~~~~i~~ 264 (514)
| +++++|+++|++++..+++.
T Consensus 275 g~~~~~~~~~~~~~~~~l~~al~~A~~~aa~~v~~ 309 (338)
T 3ljs_A 275 QFDDAAALIDFCHDPESIVSTLRFAAAVGALAVTR 309 (338)
T ss_dssp HCSSTHHHHHHHTCHHHHHHHHHHHHHHHGGGC--
T ss_pred CCCcccchhccccChHHHHHHHHHHHHHHHHHhCC
Confidence 9 89999999999996655553
No 56
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=99.72 E-value=3.9e-17 Score=164.10 Aligned_cols=150 Identities=17% Similarity=0.173 Sum_probs=123.8
Q ss_pred CcCEEEEcccCCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCCCC
Q 010240 89 QVDVVKTGMLPSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGGMQ 168 (514)
Q Consensus 89 ~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~ 168 (514)
+++++.++.. .++....+++.+++.+.+ +++||... .+.+.+.+++++|+++||..|++.|+| .
T Consensus 157 ~~~~v~~~~~-~~~~~~~~~~~a~~~g~~-v~~Dp~~~------------~~~~~~~ll~~~dil~~N~~Ea~~l~g-~- 220 (343)
T 2rbc_A 157 LFDAVLVDVR-WPELALDVLTVARALGKP-AILDGDVA------------PVETLEGLAPAATHIVFSEPAATRLTG-L- 220 (343)
T ss_dssp TCSEEEECSS-SHHHHHHHHHHHHHTTCC-EEEEECSC------------CHHHHHHHGGGCSEEEEEHHHHHHHHC-C-
T ss_pred CCCEEEEcCC-CHHHHHHHHHHHHHCCCE-EEEECCcc------------ccccHHHHHhcCCEEEeCHHHHHHHcC-C-
Confidence 5788888764 356777788888887765 99998421 123332278999999999999999998 2
Q ss_pred CCCHHHHHHHHHHHHhcCC-CeEEEecccCCCCCCceEEEEeCC--eEEEEeecccCCCCCCCCcchHHHHHHHHHHcCC
Q 010240 169 VVTVADMCSAAKLLHNLGP-RTVLVKGGDLPDSSDAVDIFFDGE--DFHELRSSRVNTRNTHGTGCTLASCIAAELAKGS 245 (514)
Q Consensus 169 ~~~~~~~~~~a~~l~~~g~-~~Vvvt~g~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~~g~ 245 (514)
++..++++.|.++|+ +.|++|.|..| .++++++ +.++++.++++++||+||||+|+|+|++.|++|+
T Consensus 221 ----~~~~~~~~~l~~~g~~~~VvvT~G~~G------~~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~ 290 (343)
T 2rbc_A 221 ----ETVKDMLPVLHARYPQTFIAVTAGPAG------CWWTEADDPTVHFQTTMQVEAVDTLAAGDIFHGTFALAMAEGM 290 (343)
T ss_dssp ----SSHHHHHHHHHHHSTTSEEEEECGGGC------EEEECTTCCCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTC
T ss_pred ----CCHHHHHHHHHHhCCCceEEEEECCcc------eEEEeCCCceeEEecCCCCccccCCChHHHHHHHHHHHHHcCC
Confidence 245677888888998 99999999987 7777766 6788888888889999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHhc
Q 010240 246 PMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 246 ~l~~A~~~A~~~~~~~i~~ 264 (514)
++++|+++|++++..+++.
T Consensus 291 ~~~~a~~~A~~~aa~~v~~ 309 (343)
T 2rbc_A 291 QSRAAVRLSSVAAALKCTV 309 (343)
T ss_dssp CHHHHHHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHHHHhCC
Confidence 9999999999998877775
No 57
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=99.72 E-value=2.9e-17 Score=166.70 Aligned_cols=224 Identities=15% Similarity=0.202 Sum_probs=152.9
Q ss_pred CCeEEEEecCCCCChhcHHHHHHHHHHcCceeeec------ceE---eeeecCC-Ceeee----EecCHHHHHH-HHHHH
Q 010240 20 IPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTV------ITA---VTAQNTA-GVQGV----NIVPEDFVAA-QLKSV 84 (514)
Q Consensus 20 ~~~vL~i~g~d~~ggag~~a~~~~l~~~g~~~~~~------~t~---~~~~n~~-~~~~~----~~~~~~~~~~-~l~~l 84 (514)
....+..-|.|.+|..-. ..|+..|+....+ .|. +...+.. .+... ..++++.+.. .+...
T Consensus 100 ~~~~ig~vG~D~~G~~~~----~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~~g~rt~~~~~ga~~~l~~~~~~~~~~~~~ 175 (370)
T 3vas_A 100 VCSYVGCIGADIQGKYIK----NDCSALDLVTEFQIAEEPLMTGKVAVLVSEKLRSMVTYLGAACDLSLAHIEQPHVWSL 175 (370)
T ss_dssp CEEEEEEECSSHHHHHHH----HHHHHTTCEECCEECCTTCCEEEEEEEECSSCEEEEEEEEGGGGCCHHHHTSHHHHHH
T ss_pred cEEEEEEEcCChhHHHHH----HHHHHcCCcccccccCCCCCceEEEEEEeCCceeEEEccchhhhCCHHHcCchhhHHH
Confidence 345566677777776655 6777777753322 121 1111111 11111 1233333332 11122
Q ss_pred HcCCCcCEEEE-ccc--CCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHH
Q 010240 85 LSDMQVDVVKT-GML--PSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEAS 161 (514)
Q Consensus 85 ~~~~~~~~i~~-G~~--~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~ 161 (514)
++ +++++.+ |+. .+.+.+..+++.+++.+.+ +++||... ++.....+.+ ..+++++|+++||+.|++
T Consensus 176 ~~--~~~~v~~~g~~~~~~~~~~~~~~~~a~~~g~~-v~ld~~~~------~~~~~~~~~l-~~ll~~~dil~~N~~Ea~ 245 (370)
T 3vas_A 176 VE--KAQVYYIAGFVINTCYEGMLKIAKHSLENEKL-FCFNLSAP------FLSQFNTKEV-DEMISYSNIVFGNESEAE 245 (370)
T ss_dssp HH--HCSEEEEEGGGHHHHHHHHHHHHHHHHHTTCE-EEEECCCH------HHHHHCHHHH-HHHHTTCSEEEEEHHHHH
T ss_pred Hh--hCCEEEEEeeeccCCHHHHHHHHHHHHHcCCE-EEEECCcH------HHHHHHHHHH-HHHHhhCCEEEcCHHHHH
Confidence 22 4788877 443 2456778888888888775 99997310 1111112333 478899999999999999
Q ss_pred HhhCCCCCCCHHHHHHHHHHHHhc-------CCCeEEEecccCCCCCCceEEEEe--CCeEEEEeeccc---CCCCCCCC
Q 010240 162 ALLGGMQVVTVADMCSAAKLLHNL-------GPRTVLVKGGDLPDSSDAVDIFFD--GEDFHELRSSRV---NTRNTHGT 229 (514)
Q Consensus 162 ~L~g~~~~~~~~~~~~~a~~l~~~-------g~~~Vvvt~g~~g~~~~~~~~~~~--~~~~~~~~~~~~---~~~d~~Ga 229 (514)
.|++ ....+.++..+++++|.++ +++.|+||.|..| .++++ +++.++++.+++ +++||+||
T Consensus 246 ~l~g-~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~VvvT~G~~G------a~~~~~~~~~~~~~~~~~v~~~~vvDttGA 318 (370)
T 3vas_A 246 AYGE-VHGLLEDTVHATARYIADLPFADGKKRKRLVIITRGKNP------LLYTDSSDSEIHQFMVEQFKDDQIIDTNGA 318 (370)
T ss_dssp HHHH-HTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEE------EEEEETTCSSCEEECCCCCCTTTCSCCTTH
T ss_pred HHhc-ccCCCccCHHHHHHHHHhhcccccccCCCEEEEecCCCc------eEEEEcCCCeEEEEecccccCCCcCCCCCh
Confidence 9997 3333446788889999875 8999999999987 78887 777788888876 78899999
Q ss_pred cchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhc
Q 010240 230 GCTLASCIAAELAKGSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 230 GD~f~a~i~~~l~~g~~l~~A~~~A~~~~~~~i~~ 264 (514)
||+|+|+|++.|++|+++++|+++|++++..++++
T Consensus 319 GDaF~ag~l~~l~~g~~l~~a~~~A~aaAa~~v~~ 353 (370)
T 3vas_A 319 GDAFAAGFIADYIRGKPMITSLHAAVKAAAYIICR 353 (370)
T ss_dssp HHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999998888775
No 58
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=99.71 E-value=1.9e-17 Score=164.19 Aligned_cols=153 Identities=20% Similarity=0.328 Sum_probs=121.7
Q ss_pred CcCEEEEcccCCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCCCC
Q 010240 89 QVDVVKTGMLPSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGGMQ 168 (514)
Q Consensus 89 ~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~ 168 (514)
+++++.+|.+ +++....+++.+ +.+. ++++||. .++.+...+.+. ++++++|+++||..|++.|+| .
T Consensus 119 ~~~~v~~~~~-~~~~~~~~~~~~-~~~~-~v~~Dp~-------~~~~~~~~~~~~-~~l~~~dil~~N~~E~~~l~g-~- 185 (313)
T 3kd6_A 119 DSKFVCLGNI-DPELQLKVLDQI-DDPK-LVVCDTM-------NFWIEGKPEELK-KVLARVDVFIVNDSEARLLSG-D- 185 (313)
T ss_dssp TCSEEEECSS-CHHHHHHHHTTC-SSCS-EEEEECC-------HHHHHHCHHHHH-HHHTTCSEEEEEHHHHHHHHS-C-
T ss_pred cCCEEEEcCC-CHHHHHHHHHHH-hhCC-EEEEcCh-------hhhhhhhHHHHH-HHHhcCCEEEeCHHHHHHHhC-C-
Confidence 5899999987 455555555555 3333 4899982 111122223343 688999999999999999998 2
Q ss_pred CCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeeccc-CCCCCCCCcchHHHHHHHHHHcCC--
Q 010240 169 VVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRV-NTRNTHGTGCTLASCIAAELAKGS-- 245 (514)
Q Consensus 169 ~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~GaGD~f~a~i~~~l~~g~-- 245 (514)
++..++++.|.+.|++.|++|.|..| .+++++++.++++..++ +++||+||||+|+|+|++.|++|.
T Consensus 186 ----~~~~~~~~~l~~~g~~~vvvt~G~~G------~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~ 255 (313)
T 3kd6_A 186 ----PNLVKTARIIREMGPKTLIIKKGEHG------ALLFTDNGIFAAPAFPLESIYDPTGAGDTFAGGFIGHLARCGNT 255 (313)
T ss_dssp ----SCHHHHHHHHHTTSCSEEEEECTTSC------EEEEETTEEEEECCCTTCCCSCCTTHHHHHHHHHHHHHHHHCCC
T ss_pred ----CCHHHHHHHHHHcCCCEEEEeeCCCc------EEEEECCceEEeCCCCCCCcCCCCCccHHHHHHHHHHHHcCCCc
Confidence 24677888999999999999999988 78888888888998887 688999999999999999999998
Q ss_pred ---CHHHHHHHHHHHHHHHHhc
Q 010240 246 ---PMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 246 ---~l~~A~~~A~~~~~~~i~~ 264 (514)
++++|+++|++++..+++.
T Consensus 256 ~~~~l~~a~~~a~~~aa~~v~~ 277 (313)
T 3kd6_A 256 SEAEMRKAVLYGSAMASFCVEQ 277 (313)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTS
T ss_pred cccCHHHHHHHHHHHHHHHHee
Confidence 8999999999998877775
No 59
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=99.71 E-value=1.5e-16 Score=158.67 Aligned_cols=155 Identities=17% Similarity=0.213 Sum_probs=123.0
Q ss_pred CcCEEEEcc-c----CCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHh
Q 010240 89 QVDVVKTGM-L----PSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASAL 163 (514)
Q Consensus 89 ~~~~i~~G~-~----~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L 163 (514)
+.+.+.++. . .+.+.+..+++.+++.+ . +++||+++.. ++. ..+.+. ++++++|+++||..|++.|
T Consensus 135 ~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~-~-~~~d~~~~~~----~~~--~~~~~~-~~l~~~dil~~N~~E~~~l 205 (325)
T 3h49_A 135 QAKLLSLASIFNSPLLDGKALTEIFTQAKARQ-M-IICADMIKPR----LNE--TLDDIC-EALSYVDYLFPNFAEAKLL 205 (325)
T ss_dssp GCSEEEEEEETTSTTSCHHHHHHHHHHHHHTT-C-EEEEEECCCS----SCC--CHHHHH-HHHTTCSEEECBHHHHHHH
T ss_pred cCCEEEEecccCCcccCHHHHHHHHHHHHhcC-C-EEEecCCchh----hhh--HHHHHH-HHHhhCCEEecCHHHHHHH
Confidence 466666543 2 24567788888888876 4 8889876532 111 123343 6789999999999999999
Q ss_pred hCCCCCCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeeccc-CCCCCCCCcchHHHHHHHHHH
Q 010240 164 LGGMQVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRV-NTRNTHGTGCTLASCIAAELA 242 (514)
Q Consensus 164 ~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~GaGD~f~a~i~~~l~ 242 (514)
+| . ++..++++.|.+.|++.|++|.|.+| .+++++++.++++..+. +++||+||||+|+|+|++.|+
T Consensus 206 ~g-~-----~~~~~~~~~l~~~g~~~vvvt~G~~G------~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~~~~l~ 273 (325)
T 3h49_A 206 TG-K-----ETLDEIADCFLACGVKTVVIKTGKDG------CFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALL 273 (325)
T ss_dssp HT-C-----SSHHHHHHHHHTTTCSEEEEECTTSC------EEEEETTEEEEECCCSSCCCSCCTTHHHHHHHHHHHHHH
T ss_pred hC-C-----CCHHHHHHHHHHcCCCEEEEEeCCCC------eEEEECCeEEEecCcCCCCCcCCCChhHHHHHHHHHHHH
Confidence 98 2 23456788888999999999999988 78888888888888775 788999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHhc
Q 010240 243 KGSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 243 ~g~~l~~A~~~A~~~~~~~i~~ 264 (514)
+|+++++|+++|++++..+++.
T Consensus 274 ~g~~~~~a~~~A~~~aa~~v~~ 295 (325)
T 3h49_A 274 EGKNLRECARFANATAAISVLS 295 (325)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTS
T ss_pred cCCCHHHHHHHHHHHHHHHHcc
Confidence 9999999999999997777765
No 60
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=99.71 E-value=1.6e-16 Score=157.32 Aligned_cols=154 Identities=21% Similarity=0.223 Sum_probs=118.0
Q ss_pred CcCEEEE-cccC-----CHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHH
Q 010240 89 QVDVVKT-GMLP-----STDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASA 162 (514)
Q Consensus 89 ~~~~i~~-G~~~-----~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~ 162 (514)
+++++.+ |+.. +.+.+..+++.+++.+.+ +++||++++ .+++.+......+++++++|+++||..|++.
T Consensus 125 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~-v~~D~~~~~----~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~ 199 (309)
T 1v1a_A 125 GVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVR-VSLDVNYRQ----TLWSPEEARGFLERALPGVDLLFLSEEEAEL 199 (309)
T ss_dssp TCSEEEEETTGGGSCHHHHHHHHHHHHHHHTTTCE-EEEECCCCT----TTSCHHHHHHHHHHHGGGCSEEEEEHHHHHH
T ss_pred CCCEEEEeCchhccCchHHHHHHHHHHHHHHcCCE-EEEeCCCCc----ccCCHHHHHHHHHHHHHhCCEEECcHHHHHH
Confidence 5788776 4432 124566677777777665 999998764 2334333333334789999999999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHHH
Q 010240 163 LLGGMQVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELA 242 (514)
Q Consensus 163 L~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~ 242 (514)
|+| .. .++++ +.|++.|++|.|++| .++..+++.++++.++++++|++||||+|+|+|++.|+
T Consensus 200 l~g-~~-------~~~~~---~~g~~~vvvt~G~~G------~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~ 262 (309)
T 1v1a_A 200 LFG-RV-------EEALR---ALSAPEVVLKRGAKG------AWAFVDGRRVEGSAFAVEAVDPVGAGDAFAAGYLAGAV 262 (309)
T ss_dssp HHS-SH-------HHHHH---HTCCSEEEEECGGGC------EEEEETTEEEECCCCCCCCSCCTTHHHHHHHHHHHHHH
T ss_pred HhC-CH-------HHHHH---hcCCCEEEEEecCCC------eeEecCCcEEEeCCCCCCcCCCCCchHHHHHHHHHHHH
Confidence 998 21 33343 678999999999977 56633366777888888888999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHhc
Q 010240 243 KGSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 243 ~g~~l~~A~~~A~~~~~~~i~~ 264 (514)
+|+++++|+++|+++++.+++.
T Consensus 263 ~g~~~~~a~~~a~~~aa~~v~~ 284 (309)
T 1v1a_A 263 WGLPVEERLRLANLLGASVAAS 284 (309)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTS
T ss_pred cCCCHHHHHHHHHHHHHHHHcC
Confidence 9999999999999998888775
No 61
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=99.71 E-value=9e-18 Score=168.49 Aligned_cols=160 Identities=18% Similarity=0.186 Sum_probs=124.1
Q ss_pred CcCEEEEc-c-cCC---HHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHh
Q 010240 89 QVDVVKTG-M-LPS---TDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASAL 163 (514)
Q Consensus 89 ~~~~i~~G-~-~~~---~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L 163 (514)
+++++.++ + +.+ .+.+..+++.+++.+.+ +++||+++.. .+-+.+......+++++++|+++||..|++.|
T Consensus 141 ~~~~v~~~~~~l~~~~~~~~~~~~~~~a~~~g~~-v~~Dp~~~~~---~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l 216 (339)
T 1tyy_A 141 QYEWFYFSSIGLTDRPAREACLEGARRMREAGGY-VLFDVNLRSK---MWGNTDEIPELIARSAALASICKVSADELCQL 216 (339)
T ss_dssp TTCEEEEEHHHHSSHHHHHHHHHHHHHHHHTTCE-EEEECCCCGG---GCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHH
T ss_pred cCCEEEEcchhhcCcccHHHHHHHHHHHHHcCCE-EEEeCCCCcc---ccCCHHHHHHHHHHHHhhCCEEecCHHHHHHH
Confidence 57888774 3 222 34566677778777765 9999987642 12122222333347889999999999999999
Q ss_pred hCCCCCCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHHHc
Q 010240 164 LGGMQVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELAK 243 (514)
Q Consensus 164 ~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~~ 243 (514)
+|.. +..+++++|.+.|++.|++|.|.+| .+++++++.++++.++++++||+||||+|+|+|++.|++
T Consensus 217 ~g~~------~~~~~~~~l~~~g~~~VvvT~G~~G------~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~ 284 (339)
T 1tyy_A 217 SGAS------HWQDARYYLRDLGCDTTIISLGADG------ALLITAEGEFHFPAPRVDVVDTTGAGDAFVGGLLFTLSR 284 (339)
T ss_dssp HCCS------SGGGGSSTTGGGTCSCEEEECGGGC------EEEESSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHTT
T ss_pred hCCC------CHHHHHHHHHHcCCCEEEEEECCCc------eEEEeCCceEEcCCCCCCcCCCCCchHHHHHHHHHHHHh
Confidence 9832 2345667778889999999999988 777777777888888888899999999999999999999
Q ss_pred C-----CCHHHHHHHHHHHHHHHHhc
Q 010240 244 G-----SPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 244 g-----~~l~~A~~~A~~~~~~~i~~ 264 (514)
| .++++|+++|++++..+++.
T Consensus 285 g~~~~~~~l~~a~~~A~a~aa~~v~~ 310 (339)
T 1tyy_A 285 ANCWDHALLAEAISNANACGAMAVTA 310 (339)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHGGGS
T ss_pred ccccccccHHHHHHHHHHHHHHHhCC
Confidence 7 89999999999998877765
No 62
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=99.70 E-value=3.7e-17 Score=153.67 Aligned_cols=183 Identities=14% Similarity=0.154 Sum_probs=133.2
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCC-HHHH---HHHHHHHHHHHh-hcCceEEEcC---cHHHHHhCCCCeEEe--CCC
Q 010240 318 RSITDAVKAALEGGATIIQLREKDAD-TRGF---LEAAKACLQICC-VHGVPLLIND---RIDIALACDADGVHL--GQS 387 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~-~~~~---~~~~~~~~~~~~-~~~~~l~v~~---~~~~a~~~ga~gvhl--~~~ 387 (514)
.++.+.++.+.+.|++++|++..+.+ ...+ .+.++++++.+. ...+.+++++ +++.+.++|+|++|+ ...
T Consensus 16 ~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~~~~ 95 (220)
T 2fli_A 16 ANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGADIMTIHTEST 95 (220)
T ss_dssp GGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHHHTCSEEEEEGGGC
T ss_pred HHHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhCCCCEEEEEeecCHHHHHHHHHHcCCCEEEEccCcc
Confidence 46788899999999999999975443 1111 455566665442 3344556676 588899999999955 444
Q ss_pred CCCHHHHHhhcCCCcEEEEec--CCHHHHHHhhhCCCcEEEe---ccccCCCCCCCCccCCHHHHHHHHHcC-----CCC
Q 010240 388 DMPARTARALLGPDKIIGVSC--KTPEEAHQAWIDGANYIGC---GGVYPTNTKANNLTVGLDGLKTVCLAS-----KLP 457 (514)
Q Consensus 388 ~~~~~~~~~~~~~~~~ig~s~--~~~~e~~~a~~~g~d~v~~---~~vf~t~~k~~~~~~g~~~l~~~~~~~-----~~p 457 (514)
+......+...+.+..+|.++ +|+.|..++...++||+.+ +|.|.+.++ .+.+++.++++++.. +.|
T Consensus 96 ~~~~~~~~~~~~~g~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~~~---~~~~~~~i~~~~~~~~~~~~~~~ 172 (220)
T 2fli_A 96 RHIHGALQKIKAAGMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAF---IPECLEKVATVAKWRDEKGLSFD 172 (220)
T ss_dssp SCHHHHHHHHHHTTSEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCC---CGGGHHHHHHHHHHHHHTTCCCE
T ss_pred ccHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCccccc---CHHHHHHHHHHHHHHHhcCCCce
Confidence 443333344444567788888 5677777777778999965 445554433 233556666666544 789
Q ss_pred EEEECCCCcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHH
Q 010240 458 VVAIGGIGISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVL 506 (514)
Q Consensus 458 v~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~ 506 (514)
+++.|||+++|+.+++++|++ ++.+||+|++++||.++++++++.+
T Consensus 173 i~v~GGI~~~~~~~~~~~Gad---~vvvGsai~~~~d~~~a~~~~~~~~ 218 (220)
T 2fli_A 173 IEVDGGVDNKTIRACYEAGAN---VFVAGSYLFKASDLVSQVQTLRTAL 218 (220)
T ss_dssp EEEESSCCTTTHHHHHHHTCC---EEEESHHHHTSSCHHHHHHHHHHHH
T ss_pred EEEECcCCHHHHHHHHHcCCC---EEEEChHHhCCCCHHHHHHHHHHHh
Confidence 999999999999999999999 9999999999999999999998765
No 63
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.70 E-value=1.1e-16 Score=159.93 Aligned_cols=155 Identities=19% Similarity=0.262 Sum_probs=122.5
Q ss_pred CcCEEEE-cccCC---HHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHH-HHHh
Q 010240 89 QVDVVKT-GMLPS---TDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKE-ASAL 163 (514)
Q Consensus 89 ~~~~i~~-G~~~~---~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E-~~~L 163 (514)
+++++.+ |++.. .+.+..+++.+++.+.+ +++||+. ..+..+.... +.+|+++||..| ++.|
T Consensus 146 ~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~-v~~D~~~-----------~~~~~~l~~~-~~~dil~~N~~E~~~~l 212 (331)
T 2ajr_A 146 KVDCVVISGSIPPGVNEGICNELVRLARERGVF-VFVEQTP-----------RLLERIYEGP-EFPNVVKPDLRGNHASF 212 (331)
T ss_dssp TCSEEEEESCCCTTSCTTHHHHHHHHHHHTTCE-EEEECCH-----------HHHHHHHHSS-CCCSEECCCCTTCCSCB
T ss_pred cCCEEEEECCCCCCCCHHHHHHHHHHHHHcCCE-EEEECCh-----------HHHHHHHhcC-CCCeEEEeCccchHHHH
Confidence 5788777 55532 46778888888887765 9999852 1122222111 358999999999 9999
Q ss_pred hCCCCCCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEe-ecccCCCCCCCCcchHHHHHHHHHH
Q 010240 164 LGGMQVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELR-SSRVNTRNTHGTGCTLASCIAAELA 242 (514)
Q Consensus 164 ~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~GaGD~f~a~i~~~l~ 242 (514)
+| ....+.++..+++++|.++ ++.|++|.|.+| .+++++++.++++ .++++++|++||||+|+|+|++.|+
T Consensus 213 ~g-~~~~~~~~~~~~~~~l~~~-~~~vvvT~G~~G------a~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~l~~l~ 284 (331)
T 2ajr_A 213 LG-VDLKTFDDYVKLAEKLAEK-SQVSVVSYEVKN------DIVATREGVWLIRSKEEIDTSHLLGAGDAYVAGMVYYFI 284 (331)
T ss_dssp TT-BCCCSHHHHHHHHHHHHHH-SSEEEEEETTTE------EEEECSSCEEEEEESSCCCGGGCTTHHHHHHHHHHHHHH
T ss_pred hC-CCCCCHHHHHHHHHHHHHh-cCEEEEeecCCc------eEEEeCCcEEEEecCCcccccCCCchHHHHHHHHHHHHH
Confidence 87 4445667788889999888 899999999877 7777777777788 8788888999999999999999999
Q ss_pred -cCCCHHHHHHHHHHHHHHHHhc
Q 010240 243 -KGSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 243 -~g~~l~~A~~~A~~~~~~~i~~ 264 (514)
+|+++++|+++|++++..+++.
T Consensus 285 ~~g~~~~~al~~A~a~aa~~v~~ 307 (331)
T 2ajr_A 285 KHGANFLEMAKFGFASALAATRR 307 (331)
T ss_dssp HHCSCHHHHHHHHHHHHHHHTTS
T ss_pred HcCCCHHHHHHHHHHHHHHHHcC
Confidence 9999999999999997777664
No 64
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.69 E-value=1.5e-16 Score=154.12 Aligned_cols=159 Identities=21% Similarity=0.212 Sum_probs=110.0
Q ss_pred cCEEEEcccCCHHHHHH---HHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcc--cceEEcCCHHHHHHhh
Q 010240 90 VDVVKTGMLPSTDLVKV---LLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLP--MADIVTPNVKEASALL 164 (514)
Q Consensus 90 ~~~i~~G~~~~~~~~~~---~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~--~~diitpN~~E~~~L~ 164 (514)
+.+|.+|+. +.+..+. +++.+++.+.+ +|+||++.... . ......+++++ .+++||||..|+++|+
T Consensus 61 ~lvi~~G~~-~~~~~~~~~~~~~~a~~~~~p-vVlDp~g~~~~------~-~~~~~~~~ll~~~~~~vitPN~~E~~~L~ 131 (272)
T 1ekq_A 61 ALVLNIGTL-SKESVEAMIIAGKSANEHGVP-VILDPVGAGAT------P-FRTESARDIIREVRLAAIRGNAAEIAHTV 131 (272)
T ss_dssp EEEEECTTC-CHHHHHHHHHHHHHHHHTTCC-EEEECTTBTTB------H-HHHHHHHHHHHHSCCSEEEECHHHHHHHC
T ss_pred EEEEECCCC-CHHHHHHHHHHHHHHHhcCCe-EEEeCCCcCcc------c-chHHHHHHHHccCCCeEECCCHHHHHHHh
Confidence 334445663 4444444 44444566665 99999765211 1 11122234555 7899999999999999
Q ss_pred CCCC-C--------CCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHH
Q 010240 165 GGMQ-V--------VTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLAS 235 (514)
Q Consensus 165 g~~~-~--------~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a 235 (514)
| .. . .+.++..+++++|.+++...|++||.. ++++++++.+.++.......+++|+||+|+|
T Consensus 132 g-~~~~~~~gvd~~~~~~~~~~aa~~l~~~~~~vVv~~G~~--------~~i~~~~~~~~~~~~~~~~~~ttGaGD~lag 202 (272)
T 1ekq_A 132 G-VTDWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAITGEV--------DVIADTSHVYTLHNGHKLLTKVTGAGCLLTS 202 (272)
T ss_dssp C----------------HHHHHHHHHHHHHHTSEEEECSSS--------EEEECSSCEEEECCCCGGGGGSTTHHHHHHH
T ss_pred C-CCcccccCccCCCCHHHHHHHHHHHHHHcCCEEEEECCC--------CEEEeCCEEEEEcCCCccccCccCchHHHHH
Confidence 8 33 2 345678888999988776778888654 6677766666676654444589999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHhccc
Q 010240 236 CIAAELAKGSPMLSAVKVAKCFVETALDYSK 266 (514)
Q Consensus 236 ~i~~~l~~g~~l~~A~~~A~~~~~~~i~~~~ 266 (514)
++++++++|.++.+|++.|+.+...+.+.+.
T Consensus 203 ~iaa~la~g~~~~~A~~~A~~~~~~A~~~a~ 233 (272)
T 1ekq_A 203 VVGAFCAVEENPLFAAIAAISSYGVAAQLAA 233 (272)
T ss_dssp HHHHHHTTCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987777766554
No 65
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=99.69 E-value=1.6e-16 Score=157.49 Aligned_cols=158 Identities=14% Similarity=0.155 Sum_probs=120.1
Q ss_pred CcCEEEEc-ccC--CHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCC-hhHHHHHHHhhcccce--EEcCCHHHHHH
Q 010240 89 QVDVVKTG-MLP--STDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAG-PSTITGLRENLLPMAD--IVTPNVKEASA 162 (514)
Q Consensus 89 ~~~~i~~G-~~~--~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~-~~~~~~l~~~ll~~~d--iitpN~~E~~~ 162 (514)
+++.+.++ +.. +....+.+.++++..+.. ++||+++. .+++ .+......+++++++| +++||..|++.
T Consensus 128 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~--~~D~~~~~----~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~ 201 (313)
T 2v78_A 128 NSRLVHSTGITLAISDNAKEAVIKAFELAKSR--SLDTNIRP----KLWSSLEKAKETILSILKKYDIEVLITDPDDTKI 201 (313)
T ss_dssp TSSEEEEEHHHHHHCHHHHHHHHHHHHHCSSE--EEECCCCG----GGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHHH
T ss_pred CCCEEEEcCchhhcChHHHHHHHHHHHHHHHh--CcCCcCCh----hhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHHH
Confidence 47787764 332 222233444444443332 89998763 2332 3333333446889999 99999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHHH
Q 010240 163 LLGGMQVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELA 242 (514)
Q Consensus 163 L~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~ 242 (514)
|+| . ++..+++++|.+.|++.|++|.|.+| .+++.+++.++++.++++++||+||||+|+|+|++.|+
T Consensus 202 l~g-~-----~~~~~~~~~l~~~g~~~vvvt~G~~G------~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~ 269 (313)
T 2v78_A 202 LLD-V-----TDPDEAYRKYKELGVKVLLYKLGSKG------AIAYKDNVKAFKDAYKVPVEDPTGAGDAMAGTFVSLYL 269 (313)
T ss_dssp HHS-C-----CCHHHHHHHHHHTTEEEEEEECGGGC------EEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHH
T ss_pred HhC-C-----CCHHHHHHHHHhCCCCEEEEEECCCC------cEEeeCCcEEEeCCCcCCccCCCCchHHHHHHHHHHHH
Confidence 998 2 23556788888889999999999987 77777777788898888889999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHhc
Q 010240 243 KGSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 243 ~g~~l~~A~~~A~~~~~~~i~~ 264 (514)
+|+++++|+++|+++++.+++.
T Consensus 270 ~g~~~~~a~~~a~~~aa~~v~~ 291 (313)
T 2v78_A 270 QGKDIEYSLAHGIAASTLVITV 291 (313)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTS
T ss_pred cCCCHHHHHHHHHHHHHHHhcc
Confidence 9999999999999998888775
No 66
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=99.69 E-value=4.6e-18 Score=169.78 Aligned_cols=159 Identities=18% Similarity=0.235 Sum_probs=115.8
Q ss_pred CcCEEEEccc-----CCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCC-hhHHHHHHHhhcccceEEcCCHHHHHH
Q 010240 89 QVDVVKTGML-----PSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAG-PSTITGLRENLLPMADIVTPNVKEASA 162 (514)
Q Consensus 89 ~~~~i~~G~~-----~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~-~~~~~~l~~~ll~~~diitpN~~E~~~ 162 (514)
+++.+.++.. .+.+.+..+++.+++.+.+ +++||+++.. .+.+ ....+.+ +++++++|+++||..|++.
T Consensus 144 ~~~~v~~~g~~l~~~~~~~~~~~~~~~a~~~g~~-v~~D~~~~~~---~~~~~~~~~~~~-~~~l~~~dil~~N~~E~~~ 218 (327)
T 3hj6_A 144 RSKVFHLSTFILSRKPARDTAIKAFNYAREQGKI-VCFDPCYRKV---LWPEGDDGAGVV-EEIISRADFVKPSLDDARH 218 (327)
T ss_dssp --CEEEEESHHHHSHHHHHHHHHHHHHHHHTTCE-EEEECCCCGG---GSCSSSCSHHHH-HHHHTTCSEECCBHHHHHH
T ss_pred cCCEEEECchHhcCchhHHHHHHHHHHHHHCCCE-EEEECCCchh---hcCCHHHHHHHH-HHHHhhCCEEecCHHHHHH
Confidence 4677776531 1345667778888887765 9999976532 1111 1222333 4788999999999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHHH
Q 010240 163 LLGGMQVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELA 242 (514)
Q Consensus 163 L~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~ 242 (514)
|+|. ++..++++.|.+.|++.|++|.|.+| .+++++++.++++.++++++||+||||+|+|+|++.|+
T Consensus 219 l~g~------~~~~~~~~~l~~~g~~~vvvt~G~~G------~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~ 286 (327)
T 3hj6_A 219 LFGP------DSPENYVKRYLELGVKAVILTLGEEG------VIASDGEEIIRIPAFSEDAVDVTGAGDAFWSGFICGLL 286 (327)
T ss_dssp HHTT------SCSSGGGGGGTTTTCSEEEEECSTTC------EEEECSSCEEESCSSTTC-----CCHHHHHHHHHHTTS
T ss_pred HhCC------CCHHHHHHHHHhCCCCEEEEEECCCc------eEEEeCCeeEEcCCcccccCCCcChhHHHHHHHHHHHH
Confidence 9983 12334667788889999999999988 78888777888888888889999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHhc
Q 010240 243 KGSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 243 ~g~~l~~A~~~A~~~~~~~i~~ 264 (514)
+|+++++|+++|+++++.+++.
T Consensus 287 ~g~~~~~a~~~A~a~aa~~v~~ 308 (327)
T 3hj6_A 287 DGYTVKRSIKLGNGVAAFKIRG 308 (327)
T ss_dssp SCSTTHHHHHHHHCCCSSCC--
T ss_pred cCCCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999985555443
No 67
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=99.69 E-value=1e-16 Score=161.42 Aligned_cols=162 Identities=12% Similarity=0.123 Sum_probs=124.9
Q ss_pred CcCEEEE-ccc--CCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhC
Q 010240 89 QVDVVKT-GML--PSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLG 165 (514)
Q Consensus 89 ~~~~i~~-G~~--~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g 165 (514)
+++.+.+ |+. .+.+.+..+++.+++.+.+ +++||-. .++.....+.+ .++++++|+++||+.|++.|++
T Consensus 162 ~~~~~~~~g~~~~~~~~~~~~~~~~a~~~g~~-v~~d~~~------~~~~~~~~~~l-~~~l~~~dil~~N~~Ea~~l~~ 233 (347)
T 3otx_A 162 ESRIFYFSGFTLTVDVNHVLQACRKAREVDGL-FMINLSA------PFIMQFFSAQL-GEVLPYTDIIVANRHEAKEFAN 233 (347)
T ss_dssp HCSEEEEEGGGGGTCHHHHHHHHHHHHHTTCE-EEEECCC------HHHHHHCHHHH-HHHGGGCSEEEEEHHHHHHHHH
T ss_pred hCCEEEEeeeecccCHHHHHHHHHHHHHhCCE-EEeeCch------hhhHHHHHHHH-HHHHhhCCEEecCHHHHHHHhc
Confidence 3677776 432 3678888899999888775 9999720 01111112334 3788999999999999999986
Q ss_pred CCCCCCHHHHHHHHHHHH------hcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeeccc---CCCCCCCCcchHHHH
Q 010240 166 GMQVVTVADMCSAAKLLH------NLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRV---NTRNTHGTGCTLASC 236 (514)
Q Consensus 166 ~~~~~~~~~~~~~a~~l~------~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~d~~GaGD~f~a~ 236 (514)
....+.++..+++++|. +.+++.|++|.|.+| .+++++++.++++.+++ +++||+||||+|+|+
T Consensus 234 -~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~G------a~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag 306 (347)
T 3otx_A 234 -MMKWDTDCVEEIARRAVSEVPYTGTKGRVVVFTRDIES------TVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGG 306 (347)
T ss_dssp -HHTCCCCCHHHHHHHHHHTSCCCCSSCCEEEEEETTEE------EEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHHH
T ss_pred -ccCCCcCCHHHHHHHHHhhhccccCCCCEEEEEeCCCC------eEEEECCeEEEEEecccCCCCCCCCCChHHHHHHH
Confidence 22222245667777887 478999999999987 78888888788888776 678999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHhcc
Q 010240 237 IAAELAKGSPMLSAVKVAKCFVETALDYS 265 (514)
Q Consensus 237 i~~~l~~g~~l~~A~~~A~~~~~~~i~~~ 265 (514)
|++.|++|+++++|+++|+.+++.++++.
T Consensus 307 ~l~~l~~g~~l~~a~~~a~~~aa~~v~~~ 335 (347)
T 3otx_A 307 FLSAYAVGKDLRRCCETGHYTAQEVIQRD 335 (347)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHccc
Confidence 99999999999999999999988887753
No 68
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=99.68 E-value=6e-17 Score=162.94 Aligned_cols=161 Identities=16% Similarity=0.181 Sum_probs=124.9
Q ss_pred CcCEEEE-ccc--CCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhC
Q 010240 89 QVDVVKT-GML--PSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLG 165 (514)
Q Consensus 89 ~~~~i~~-G~~--~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g 165 (514)
+++++.+ |+. .+.+.+..+++.+++.+.+ +++||... ++.+...+.+ +++++++|+++||..|++.|+|
T Consensus 161 ~~~~v~~~g~~~~~~~~~~~~~~~~a~~~g~~-v~~d~~~~------~~~~~~~~~~-~~~l~~~dil~~N~~E~~~l~g 232 (345)
T 1bx4_A 161 KARVCYIAGFFLTVSPESVLKVAHHASENNRI-FTLNLSAP------FISQFYKESL-MKVMPYVDILFGNETEAATFAR 232 (345)
T ss_dssp HCSEEEEEGGGGGTCHHHHHHHHHHHHHTTCE-EEEECCSH------HHHHHTHHHH-HHHGGGCSEEEEEHHHHHHHHH
T ss_pred hCCEEEEEEEeccCCHHHHHHHHHHHHHcCCE-EEEeCCcH------HHHHHHHHHH-HHHhccCCEEeCCHHHHHHHhc
Confidence 3677776 442 3567788888888887765 99997311 1111122334 4688999999999999999987
Q ss_pred CCCCCCHHHHHHHHHHHHh------cCCCeEEEecccCCCCCCceEEEEeCCeEEEEeeccc---CCCCCCCCcchHHHH
Q 010240 166 GMQVVTVADMCSAAKLLHN------LGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRV---NTRNTHGTGCTLASC 236 (514)
Q Consensus 166 ~~~~~~~~~~~~~a~~l~~------~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~d~~GaGD~f~a~ 236 (514)
....+.++..+++++|.+ .|++.|++|.|++| .+++++++.++++.+++ +++||+||||+|+|+
T Consensus 233 -~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G------~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaf~ag 305 (345)
T 1bx4_A 233 -EQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDD------TIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGG 305 (345)
T ss_dssp -HTTCCCCCHHHHHHHHHTSCCSCTTSCCEEEEEETTEE------EEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHH
T ss_pred -ccCCCCCCHHHHHHHHHhcccccccCCCEEEEEeCCCC------eEEEECCeEEEEeccccCcCccccCCCcchHHHHH
Confidence 222223456778888888 58999999999877 67777777778888776 788999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHhc
Q 010240 237 IAAELAKGSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 237 i~~~l~~g~~l~~A~~~A~~~~~~~i~~ 264 (514)
|++.|++|+++++|+++|+++++.+++.
T Consensus 306 ~~~~l~~g~~~~~a~~~A~~~aa~~v~~ 333 (345)
T 1bx4_A 306 FLSQLVSDKPLTECIRAGHYAASIIIRR 333 (345)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999998877765
No 69
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=99.68 E-value=6.6e-17 Score=163.87 Aligned_cols=162 Identities=15% Similarity=0.202 Sum_probs=121.9
Q ss_pred CcCEEEE-ccc--CCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhC
Q 010240 89 QVDVVKT-GML--PSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLG 165 (514)
Q Consensus 89 ~~~~i~~-G~~--~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g 165 (514)
+++.+.+ |+. .+++.+..+++.+++.+.+ +++||- . ..+.....+.+. .+++++|+++||+.|++.|++
T Consensus 176 ~~~~v~i~G~~~~~~~~~~~~~~~~a~~~g~~-v~~d~~----~--~~~~~~~~~~l~-~~l~~~dil~~N~~Ea~~l~g 247 (365)
T 3loo_A 176 GAQFFYVSGFFFTVSFESALSVAKEAAATGRM-FMMNLS----A--PFVPQFYKNNLE-EIFPYVDVLFGNETEAIALAK 247 (365)
T ss_dssp HCSEEEEEGGGHHHHHHHHHHHHHHHHHTTCE-EEEECC----S--THHHHHCHHHHH-HHGGGCSEEEEEHHHHHHHHH
T ss_pred hCCEEEEeeeeccCCHHHHHHHHHHHHHcCCE-EEEECC----c--hhhhHHHHHHHH-HHHHhCCEEecCHHHHHHHhc
Confidence 3677777 443 2456777888888888765 899961 0 111111223343 678999999999999999987
Q ss_pred CCCCCCHHHHHHHHHHHHhc------CCCeEEEecccCCCCCCceEEEE--eCCeEEEEeeccc---CCCCCCCCcchHH
Q 010240 166 GMQVVTVADMCSAAKLLHNL------GPRTVLVKGGDLPDSSDAVDIFF--DGEDFHELRSSRV---NTRNTHGTGCTLA 234 (514)
Q Consensus 166 ~~~~~~~~~~~~~a~~l~~~------g~~~Vvvt~g~~g~~~~~~~~~~--~~~~~~~~~~~~~---~~~d~~GaGD~f~ 234 (514)
....+.++..+++++|.++ +++.|++|.|.+| .+++ .+++.++++.+++ +++||+||||+|+
T Consensus 248 -~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~G------a~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ 320 (365)
T 3loo_A 248 -EFNYGTEDLREIGKRIAALPKENGKRKRIVIITQGSDP------VLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFV 320 (365)
T ss_dssp -HTTCCCCCHHHHHHHHHTSCCSSTTSCCEEEEEETTEE------EEEEETTCSCCEEECCCCCC------CTTHHHHHH
T ss_pred -ccCCCCCCHHHHHHHHHhhhhhccCCCCEEEEEeCCCC------EEEEEecCCeEEEEeccccCCCCccCCCChHHHHH
Confidence 3222335567788888774 8899999999987 7777 6667778888887 6789999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHhcc
Q 010240 235 SCIAAELAKGSPMLSAVKVAKCFVETALDYS 265 (514)
Q Consensus 235 a~i~~~l~~g~~l~~A~~~A~~~~~~~i~~~ 265 (514)
|+|+++|++|+++++|+++|+.++..++++.
T Consensus 321 agfl~~l~~g~~l~~a~~~a~~~Aa~~v~~~ 351 (365)
T 3loo_A 321 GGFLAQLLQSRTVDVCIKCGIWAAREIIQRS 351 (365)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999998888864
No 70
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=99.68 E-value=1.3e-16 Score=158.12 Aligned_cols=157 Identities=17% Similarity=0.154 Sum_probs=118.7
Q ss_pred CcCEEEEc-ccC--CHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcc--cceEEcCCHHHHHHh
Q 010240 89 QVDVVKTG-MLP--STDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLP--MADIVTPNVKEASAL 163 (514)
Q Consensus 89 ~~~~i~~G-~~~--~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~--~~diitpN~~E~~~L 163 (514)
+++++.++ +.. +....+.+.++++..+.. ++||+++. .+++.+......+.+++ ++|+++||..|++.|
T Consensus 128 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~--~~D~~~~~----~~~~~~~~~~~~~~~l~~~~~dil~~N~~E~~~l 201 (311)
T 2dcn_A 128 SADLVHSSGITLAISSTAKEAVYKAFEIASNR--SFDTNIRL----KLWSAEEAKREILKLLSKFHLKFLITDTDDSKII 201 (311)
T ss_dssp TCSEEEEEHHHHHSCHHHHHHHHHHHHHCSSE--EEECCCCT----TTSCHHHHHHHHHHHHHHCCEEEEEEEHHHHHHH
T ss_pred CCCEEEEeCcccccChHHHHHHHHHHHHHHHh--CcCccCch----hhCChHHHHHHHHHHHhhcCCcEEECCHHHHHHH
Confidence 57887764 322 222233344444443332 89998763 24443333333347889 999999999999999
Q ss_pred hCCCCCCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHHHc
Q 010240 164 LGGMQVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELAK 243 (514)
Q Consensus 164 ~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~~ 243 (514)
+|. ++..+++++|.++ ++.|++|.|.+| .+++++++.++++.++++++||+||||+|+|+|++.|++
T Consensus 202 ~g~------~~~~~~~~~l~~~-~~~vvvt~G~~G------~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~ 268 (311)
T 2dcn_A 202 LGE------SDPDKAAKAFSDY-AEIIVMKLGPKG------AIVYYDGKKYYSSGYQVPVEDVTGAGDALGGTFLSLYYK 268 (311)
T ss_dssp HSC------CCHHHHHHHHTTT-EEEEEEEEETTE------EEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHTT
T ss_pred hCC------CCHHHHHHHHHHh-CCEEEEEECCCC------cEEEeCCcEEEeCCccccccCCCCchHHHHHHHHHHHHc
Confidence 982 2355778888887 889999999877 777777778888988888899999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHhc
Q 010240 244 GSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 244 g~~l~~A~~~A~~~~~~~i~~ 264 (514)
|+++++|+++|+++++.+++.
T Consensus 269 g~~~~~a~~~a~~~aa~~v~~ 289 (311)
T 2dcn_A 269 GFEMEKALDYAIVASTLNVMI 289 (311)
T ss_dssp TCCHHHHHHHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHHHHhcc
Confidence 999999999999998877765
No 71
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=99.67 E-value=8.5e-17 Score=154.90 Aligned_cols=162 Identities=23% Similarity=0.211 Sum_probs=113.3
Q ss_pred CcCEEEEcccCCHHH---HHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcc-cceEEcCCHHHHHHhh
Q 010240 89 QVDVVKTGMLPSTDL---VKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLP-MADIVTPNVKEASALL 164 (514)
Q Consensus 89 ~~~~i~~G~~~~~~~---~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~-~~diitpN~~E~~~L~ 164 (514)
++-+|.+|++ +.+. +..+.+.+++.+.+ +|+||++....+ +..+... .++. .+++||||..|+++|+
T Consensus 58 dalvi~~G~~-~~~~~~~~~~~~~~a~~~~~p-vVlDpv~~~~~~---~~~~~~~----~ll~~~~~vITPN~~E~~~L~ 128 (265)
T 1v8a_A 58 DAVVINIGTL-DSGWRRSMVKATEIANELGKP-IVLDPVGAGATK---FRTRVSL----EILSRGVDVLKGNFGEISALL 128 (265)
T ss_dssp SEEEEECTTC-CHHHHHHHHHHHHHHHHHTCC-EEEECTTBTTBH---HHHHHHH----HHHHHCCSEEEEEHHHHHHHH
T ss_pred CEEEEEECCC-CHHHHHHHHHHHHHHHHcCCc-EEEcCccccccc---cCHHHHH----HHHHhCCcEEcCCHHHHHHHh
Confidence 3444445555 5553 44455666666655 999998753211 1111222 2332 2899999999999999
Q ss_pred CCCC----CC----CHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHH
Q 010240 165 GGMQ----VV----TVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASC 236 (514)
Q Consensus 165 g~~~----~~----~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~ 236 (514)
|... .+ ..++..+++++|.+++...|++||.. ++++++++.+.++.......+++|+||+|+|+
T Consensus 129 g~~~~~~gvd~~~~~~~~~~~aa~~la~~~~~~VvlkG~~--------d~i~~~~~~~~~~~g~~~~~~~~GtGD~Lsg~ 200 (265)
T 1v8a_A 129 GEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVTGAV--------DYVSDGRRTFAVYNGHELLGRVTGTGCMVAAL 200 (265)
T ss_dssp HHHC----------CHHHHHHHHHHHHHHTTSEEEEESSS--------EEEECSSCEEEECCCCGGGGGSTTHHHHHHHH
T ss_pred CCcccccCcCcccccHHHHHHHHHHHHHHhCcEEEEcCCC--------cEEEcCCEEEEEcCCCcCcCCccChhHHHHHH
Confidence 7221 11 23678889999988887889999865 77777776666665433333899999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHhccccc
Q 010240 237 IAAELAKGSPMLSAVKVAKCFVETALDYSKDI 268 (514)
Q Consensus 237 i~~~l~~g~~l~~A~~~A~~~~~~~i~~~~~~ 268 (514)
++++|++|.+ .+|+..|..+...+.+.+.+.
T Consensus 201 iaa~lA~g~~-~~Aa~~a~~~~~~Ag~~a~~~ 231 (265)
T 1v8a_A 201 TGAFVAVTEP-LKATTSALVTFGIAAEKAYEE 231 (265)
T ss_dssp HHHHHTTSCH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCC-HHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999 999999999888888776543
No 72
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=99.67 E-value=2.2e-16 Score=155.71 Aligned_cols=150 Identities=9% Similarity=0.065 Sum_probs=119.1
Q ss_pred CcCEEEEcccCCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCCCC
Q 010240 89 QVDVVKTGMLPSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGGMQ 168 (514)
Q Consensus 89 ~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~ 168 (514)
+++++.++.. .++....+++.+++.+ + +++||+... ..+.. +.+ +++++++|+++||..|++.|+| ..
T Consensus 130 ~~~~v~~~~~-~~~~~~~~~~~a~~~g-~-v~~D~~~~~----~~~~~---~~~-~~~l~~~dil~~N~~E~~~l~g-~~ 197 (302)
T 2c4e_A 130 NTEIVHIATG-DPEFNLKCAKKAYGNN-L-VSFDPGQDL----PQYSK---EML-LEIIEHTNFLFMNKHEFERASN-LL 197 (302)
T ss_dssp CEEEEEECSS-CHHHHHHHHHHHBTTB-E-EEECCGGGG----GGCCH---HHH-HHHHHTCSEEEEEHHHHHHHHH-HH
T ss_pred cCCEEEEeCC-CcHHHHHHHHHHHhcC-C-EEEeCchhh----hhhhH---HHH-HHHHhcCCEEEcCHHHHHHHhC-CC
Confidence 5788888765 3477788888888877 5 999997532 11222 333 3678999999999999999987 22
Q ss_pred CCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccC-CCCCCCCcchHHHHHHHHHHcCCCH
Q 010240 169 VVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVN-TRNTHGTGCTLASCIAAELAKGSPM 247 (514)
Q Consensus 169 ~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~GaGD~f~a~i~~~l~~g~~l 247 (514)
..+. . +|.++ ++.|++|.|+.| .+++.+++.++++.++++ ++|++||||+|+|+|++.|++|+++
T Consensus 198 ~~~~------~-~l~~~-~~~vvvt~G~~G------~~~~~~~~~~~~~~~~v~~~vdt~GAGDaf~a~~~~~l~~g~~~ 263 (302)
T 2c4e_A 198 NFEI------D-DYLER-VDALIVTKGSKG------SVIYTKDKKIEIPCIKAGKVIDPTGAGDSYRAGFLSAYVKGYDL 263 (302)
T ss_dssp TCCH------H-HHHTT-CSEEEEECGGGC------EEEECSSCEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCCH
T ss_pred CccH------H-HHHhc-CCEEEEEECCCc------eEEEeCCcEEEeCCccCCcCCcCCCchHHHHHHHHHHHHcCCCH
Confidence 1111 1 56677 899999999988 777777777888988888 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhc
Q 010240 248 LSAVKVAKCFVETALDY 264 (514)
Q Consensus 248 ~~A~~~A~~~~~~~i~~ 264 (514)
++|+++|+++++.+++.
T Consensus 264 ~~a~~~a~~~aa~~~~~ 280 (302)
T 2c4e_A 264 EKCGLIGAATASFVVEA 280 (302)
T ss_dssp HHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHcc
Confidence 99999999998877765
No 73
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=99.67 E-value=3e-16 Score=154.53 Aligned_cols=137 Identities=20% Similarity=0.177 Sum_probs=118.6
Q ss_pred CcCEEEEcccCCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCCCC
Q 010240 89 QVDVVKTGMLPSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGGMQ 168 (514)
Q Consensus 89 ~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~ 168 (514)
+++.+.++...+.+.+..+++.+++.+.+ +++||... . .....+++++|+++||..|++.|++
T Consensus 131 ~~~~v~~~g~~~~~~~~~~~~~a~~~g~~-v~~D~~~~--------~-----~~~~~ll~~~dil~~N~~E~~~l~g--- 193 (299)
T 3ikh_A 131 AGDILLQQGNFSLDKTRALFQYARSRGMT-TVFNPSPV--------N-----PDFCHLWPLIDIAVVNESEAELLQP--- 193 (299)
T ss_dssp TTCEEEECSCSCHHHHHHHHHHHHHTTCE-EEECCCSC--------C-----GGGGGCGGGCSEEEEEHHHHHHHCC---
T ss_pred cCCEEEECCCCCHHHHHHHHHHHHHcCCE-EEEccccc--------h-----hhHHHHHhhCCEEEecHHHHHHHhc---
Confidence 68899998777788888999999888765 99998422 0 1224688999999999999999986
Q ss_pred CCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHH-HHHHHHHcCCCH
Q 010240 169 VVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLAS-CIAAELAKGSPM 247 (514)
Q Consensus 169 ~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a-~i~~~l~~g~~l 247 (514)
.+++.|++|.|.+| .+++++++.++++.++++++|++||||+|+| +|++.|++|+++
T Consensus 194 ----------------~g~~~vvvt~G~~G------~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~~l~~g~~~ 251 (299)
T 3ikh_A 194 ----------------YGVKTLVITQGAAG------AWLVQEGQRQFCPAVPAEALDTTGAGDTFLAVMLASALLRGVAP 251 (299)
T ss_dssp ----------------CSCSEEEEECGGGC------EEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTTSSS
T ss_pred ----------------CCCCEEEEEECCCc------eEEEeCCceEEeCCCCCccCCCCCchHHHHHHHHHHHHHcCCCH
Confidence 67899999999988 7888777788899988888999999999999 999999999999
Q ss_pred HH-HHHHHHHHHHHHHhc
Q 010240 248 LS-AVKVAKCFVETALDY 264 (514)
Q Consensus 248 ~~-A~~~A~~~~~~~i~~ 264 (514)
++ |+++|++++..+++.
T Consensus 252 ~~~a~~~a~~~aa~~v~~ 269 (299)
T 3ikh_A 252 DALALAHASRAAAITVSR 269 (299)
T ss_dssp CHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 99 999999998888775
No 74
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=99.67 E-value=2.3e-16 Score=144.22 Aligned_cols=166 Identities=15% Similarity=0.060 Sum_probs=126.7
Q ss_pred ceEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCce------EEEcCcHHHHH
Q 010240 302 LFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVP------LLINDRIDIAL 375 (514)
Q Consensus 302 ~~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~------l~v~~~~~~a~ 375 (514)
.++..|..... .++..+.+++++++|++.++++..+....+.++ ++++ ++... ++-.++++.+.
T Consensus 13 ~~vi~Vir~~~----~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~---~l~~---~~p~~~IGAGTVlt~~~a~~ai 82 (217)
T 3lab_A 13 KPLIPVIVIDD----LVHAIPMAKALVAGGVHLLEVTLRTEAGLAAIS---AIKK---AVPEAIVGAGTVCTADDFQKAI 82 (217)
T ss_dssp CSEEEEECCSC----GGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHH---HHHH---HCTTSEEEEECCCSHHHHHHHH
T ss_pred CCEEEEEEcCC----HHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHH---HHHH---HCCCCeEeeccccCHHHHHHHH
Confidence 35555554332 267899999999999999999999877665433 3333 33322 22345788899
Q ss_pred hCCCCeEEeCCCCCCHHHHHhhcCCCc------EEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccC-CHHHHH
Q 010240 376 ACDADGVHLGQSDMPARTARALLGPDK------IIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTV-GLDGLK 448 (514)
Q Consensus 376 ~~ga~gvhl~~~~~~~~~~~~~~~~~~------~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~-g~~~l~ 448 (514)
++||+++..|..+.+.....+. .+. .+...|.|++|+.+|.++|+||+ ++||. ... |+++++
T Consensus 83 ~AGA~fivsP~~~~evi~~~~~--~~v~~~~~~~~~PG~~TptE~~~A~~~Gad~v---K~FPa------~~~gG~~~lk 151 (217)
T 3lab_A 83 DAGAQFIVSPGLTPELIEKAKQ--VKLDGQWQGVFLPGVATASEVMIAAQAGITQL---KCFPA------SAIGGAKLLK 151 (217)
T ss_dssp HHTCSEEEESSCCHHHHHHHHH--HHHHCSCCCEEEEEECSHHHHHHHHHTTCCEE---EETTT------TTTTHHHHHH
T ss_pred HcCCCEEEeCCCcHHHHHHHHH--cCCCccCCCeEeCCCCCHHHHHHHHHcCCCEE---EECcc------ccccCHHHHH
Confidence 9999999998876554444333 344 55556999999999999999999 88883 334 699999
Q ss_pred HHHHcC-CCCEEEECCCCcccHHHHHHCCCCCCceEEEeecccC
Q 010240 449 TVCLAS-KLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSALFD 491 (514)
Q Consensus 449 ~~~~~~-~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~~ 491 (514)
.++.++ ++|+++.|||+++|+.+++++|+. .+++||.+..
T Consensus 152 al~~p~p~i~~~ptGGI~~~N~~~~l~aGa~---~~vgGs~l~~ 192 (217)
T 3lab_A 152 AWSGPFPDIQFCPTGGISKDNYKEYLGLPNV---ICAGGSWLTE 192 (217)
T ss_dssp HHHTTCTTCEEEEBSSCCTTTHHHHHHSTTB---CCEEESGGGC
T ss_pred HHHhhhcCceEEEeCCCCHHHHHHHHHCCCE---EEEEChhhcC
Confidence 999998 799999999999999999999998 8888877774
No 75
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=99.67 E-value=3.7e-16 Score=159.41 Aligned_cols=162 Identities=12% Similarity=0.092 Sum_probs=123.4
Q ss_pred CcCEEEE-ccc--CCHHHHHHHHHHHhc-CCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhh
Q 010240 89 QVDVVKT-GML--PSTDLVKVLLQSLSE-FPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALL 164 (514)
Q Consensus 89 ~~~~i~~-G~~--~~~~~~~~~~~~~~~-~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~ 164 (514)
+++++.+ |+. .+.+.+..+++.+++ .+.+ +++||... ++.+...+.+ +++++++|+++||..|++.|+
T Consensus 180 ~~~~v~~~g~~~~~~~~~~~~~~~~a~~~~g~~-v~~d~~~~------~~~~~~~~~l-~~ll~~~dil~pN~~Ea~~L~ 251 (383)
T 2abs_A 180 GALIFYATAYTLTATPKNALEVAGYAHGIPNAI-FTLNLSAP------FCVELYKDAM-QSLLLHTNILFGNEEEFAHLA 251 (383)
T ss_dssp TCCEEEEEGGGGTTCHHHHHHHHHHHHTSTTCE-EEEECCCH------HHHHHCHHHH-HHHHHTCSEEEEEHHHHHHHH
T ss_pred cCCEEEEeeecccCCHHHHHHHHHHHHHhcCCE-EEEeCCcH------HHHHHHHHHH-HHHHhhCCEEeCCHHHHHHHh
Confidence 5788877 432 356778888888887 6664 99997311 1111222334 468899999999999999998
Q ss_pred CCCCCC---C--------HHHHHHHHHHHHh------c-CCCeEEEecccCCCCCCceEEEE-----eCCeEEEEeeccc
Q 010240 165 GGMQVV---T--------VADMCSAAKLLHN------L-GPRTVLVKGGDLPDSSDAVDIFF-----DGEDFHELRSSRV 221 (514)
Q Consensus 165 g~~~~~---~--------~~~~~~~a~~l~~------~-g~~~Vvvt~g~~g~~~~~~~~~~-----~~~~~~~~~~~~~ 221 (514)
+..... + .++..+++++|.+ . |++.|+||.|..| .+++ .+++.++++.+++
T Consensus 252 g~~~~~~~~~~~~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~G------a~~~~~~~~~~~~~~~~~~~~v 325 (383)
T 2abs_A 252 KVHNLVAAEKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNP------VIAAEQTADGTVVVHEVGVPVV 325 (383)
T ss_dssp HHHTCC----------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSC------EEEEEECTTSCEEEEEECCCCC
T ss_pred cccCcccccccccccccccccHHHHHHHHHhccccccccCCCEEEEEcCCCC------eEEEEeecCCCCeEEEecCccC
Confidence 621111 1 4667788888887 3 8999999999977 6776 4555677777666
Q ss_pred ---CCCCCCCCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhc
Q 010240 222 ---NTRNTHGTGCTLASCIAAELAKGSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 222 ---~~~d~~GaGD~f~a~i~~~l~~g~~l~~A~~~A~~~~~~~i~~ 264 (514)
+++||+||||+|+|+|++.|++|+++++|+++|++++..+++.
T Consensus 326 ~~~~vvDttGAGDaF~ag~~~~l~~g~~l~~al~~A~a~aa~~v~~ 371 (383)
T 2abs_A 326 AAEKIVDTNGAGDAFVGGFLYALSQGKTVKQCIMCGNACAQDVIQH 371 (383)
T ss_dssp CGGGCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTS
T ss_pred CcCCcCcCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhc
Confidence 7889999999999999999999999999999999998888775
No 76
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=99.66 E-value=5.3e-17 Score=152.47 Aligned_cols=181 Identities=18% Similarity=0.128 Sum_probs=144.0
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCH----HHHHHHHHHHHHHHhhcCceEEEcCc---HHHHHhCCCCe--EEeCCCC
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADT----RGFLEAAKACLQICCVHGVPLLINDR---IDIALACDADG--VHLGQSD 388 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~----~~~~~~~~~~~~~~~~~~~~l~v~~~---~~~a~~~ga~g--vhl~~~~ 388 (514)
.++.+.++.+.++|++++|++..+..- ..-...++.+++.+.. ++++++++. ++.+.++|||+ +|....+
T Consensus 26 ~~l~~~i~~~~~~gad~lhvDvmDG~fvpn~t~G~~~v~~lr~~~~~-DvhLMv~~p~~~i~~~~~aGAd~itvH~ea~~ 104 (237)
T 3cu2_A 26 LQLNEEVTTLLENQINVLHFDIADGQFSSLFTVGAIGIKYFPTHCFK-DVHLMVRNQLEVAKAVVANGANLVTLQLEQYH 104 (237)
T ss_dssp GGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCTHHHHTSCTTSEE-EEEEECSCHHHHHHHHHHTTCSEEEEETTCTT
T ss_pred ccHHHHHHHHHHcCCCEEEEEEecCccccchhhhHHHHHHHhhhCCC-CeEEEEECHHHHHHHHHHcCCCEEEEecCCcc
Confidence 357788899999999999999754321 0001445566666655 889999886 88899999999 8998887
Q ss_pred CCHHHHHhhcCC---------CcEEEEec--CCHHHHHHhhhCCCcEEEe---ccccCCCCCCCCccCCHHHHHHHHHcC
Q 010240 389 MPARTARALLGP---------DKIIGVSC--KTPEEAHQAWIDGANYIGC---GGVYPTNTKANNLTVGLDGLKTVCLAS 454 (514)
Q Consensus 389 ~~~~~~~~~~~~---------~~~ig~s~--~~~~e~~~a~~~g~d~v~~---~~vf~t~~k~~~~~~g~~~l~~~~~~~ 454 (514)
.....++...+. +..+|+++ +|+.|..+....++|||.+ .|.|.++++ .+..++.++++++..
T Consensus 105 ~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~~~l~~~D~vlvMsv~pgfggq~f---~~~~l~ki~~lr~~~ 181 (237)
T 3cu2_A 105 DFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPYLDQIDVIQLLTLDPRNGTKYP---SELILDRVIQVEKRL 181 (237)
T ss_dssp SHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTTTTTTCSEEEEESEETTTTEECC---HHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHHHHhhcCceeeeeeeccCcCCeec---ChhHHHHHHHHHHHH
Confidence 766677777777 88999998 5888877777778999988 566665443 334577778777665
Q ss_pred -----CCCEEEECCCCcccHHHHHH--CCCCCCceEEEeecccCCCCHHHHHHHHHHHH
Q 010240 455 -----KLPVVAIGGIGISNASDVMK--IGVSNLKGVAVVSALFDRECILPESKKLHAVL 506 (514)
Q Consensus 455 -----~~pv~a~GGi~~~~~~~~~~--~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~ 506 (514)
++||.+.|||+++|+..+.+ +||+ ++++||+|+++ ||.+.+++|++.+
T Consensus 182 ~~~~~~~~I~vdGGI~~~~~~~~~~~~aGad---~~VvGSaIf~~-d~~~~~~~l~~~~ 236 (237)
T 3cu2_A 182 GNRRVEKLINIDGSMTLELAKYFKQGTHQID---WLVSGSALFSG-ELKTNLKVWKSSI 236 (237)
T ss_dssp GGGGGGCEEEEESSCCHHHHHHHHHSSSCCC---CEEECGGGGSS-CHHHHHHHHHHHC
T ss_pred HhcCCCceEEEECCcCHHHHHHHHHhCCCCc---EEEEeeHHhCC-CHHHHHHHHHHhh
Confidence 58999999999999999999 9999 99999999998 9999999998754
No 77
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=99.66 E-value=2.9e-16 Score=158.29 Aligned_cols=155 Identities=15% Similarity=0.117 Sum_probs=120.5
Q ss_pred CcCEEEE-cccC----CHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcc--cceEEcCCHHHHH
Q 010240 89 QVDVVKT-GMLP----STDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLP--MADIVTPNVKEAS 161 (514)
Q Consensus 89 ~~~~i~~-G~~~----~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~--~~diitpN~~E~~ 161 (514)
+++.+.+ |++. +.+.+..+++.+++.+.+ +++||... ...+...+.+ ..+++ ++|+++||..|++
T Consensus 171 ~~~~v~~~G~~~~~~~~~~~~~~~~~~a~~~g~~-v~~D~~~~------~~~~~~~~~l-~~ll~~~~~dil~~N~~Ea~ 242 (352)
T 4e3a_A 171 DAKVTYFEGYLWDPPRAKEAILDCARIAHQHGRE-MSMTLSDS------FCVDRYRGEF-LDLMRSGKVDIVFANRQEAL 242 (352)
T ss_dssp TEEEEEEEGGGGSSSSHHHHHHHHHHHHHHTTCE-EEEECCCH------HHHHHHHHHH-HHHHHTTSCCEEEEEHHHHH
T ss_pred hCCEEEEeeeecCCchHHHHHHHHHHHHHHcCCE-EEEECCch------hhHHHHHHHH-HHHhcccCCcEEEeCHHHHH
Confidence 4677765 6642 346677888888888765 99998311 0111122333 36778 8999999999999
Q ss_pred HhhCCCCCCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccC-CCCCCCCcchHHHHHHHH
Q 010240 162 ALLGGMQVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVN-TRNTHGTGCTLASCIAAE 240 (514)
Q Consensus 162 ~L~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~GaGD~f~a~i~~~ 240 (514)
.|+|. ++..++++.+.+ +++.|++|.|.+| .+++++++.++++..+++ ++||+||||+|+|+|++.
T Consensus 243 ~l~g~------~~~~~a~~~l~~-~~~~vvvT~G~~G------~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~agfl~~ 309 (352)
T 4e3a_A 243 SLYQT------DDFEEALNRIAA-DCKIAAVTMSENG------AVILKGRERYYVNAIRIREVVDTTGAGDLFASGFLYG 309 (352)
T ss_dssp HHTTC------SCHHHHHHHHHH-HSSEEEEECGGGC------EEEEETTEEEEECCCCCSCCSCCTTHHHHHHHHHHHH
T ss_pred HHhCC------CCHHHHHHHHhc-CCCEEEEEECCCc------eEEEECCEEEEECCccCCCCcCCCChHHHHHHHHHHH
Confidence 99982 234556666665 6889999999988 788888888889988876 789999999999999999
Q ss_pred HHcCCCHHHHHHHHHHHHHHHHhc
Q 010240 241 LAKGSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 241 l~~g~~l~~A~~~A~~~~~~~i~~ 264 (514)
|++|+++++|+++|+.++..+++.
T Consensus 310 l~~g~~l~~a~~~A~~aAa~~v~~ 333 (352)
T 4e3a_A 310 YTQGRSLEDCGKLGCLAAGIVIQQ 333 (352)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHTTS
T ss_pred HHcCCCHHHHHHHHHHHHHHHHcC
Confidence 999999999999999998877764
No 78
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.65 E-value=2e-16 Score=155.74 Aligned_cols=160 Identities=18% Similarity=0.208 Sum_probs=119.3
Q ss_pred CCcCEEEEcccCCHHHHHHHHHHHhcCCCCcEEEecce--ecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhC
Q 010240 88 MQVDVVKTGMLPSTDLVKVLLQSLSEFPVRALVVDPVM--VSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLG 165 (514)
Q Consensus 88 ~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~ivlDPv~--~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g 165 (514)
..++++.+|.....+....+++.+++.+.+ +++||+. ....+..+ .+...+.+ +++++.+|+++||..|++.|+|
T Consensus 118 ~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~-v~~D~~~~~~~~~~~~~-~~~~~~~~-~~~l~~~dil~~N~~E~~~l~g 194 (298)
T 1vk4_A 118 IEGEAVHINPLWYGEFPEDLIPVLRRKVMF-LSADAQGFVRVPENEKL-VYRDWEMK-EKYLKYLDLFKVDSREAETLTG 194 (298)
T ss_dssp CCSSEEEECCSSTTSSCGGGHHHHHHHCSE-EEEETHHHHEEEETTEE-EECCCTTH-HHHGGGCSEEEEEHHHHHHHHS
T ss_pred CCCCEEEECCcccccccHHHHHHHHHcCCE-EEEecCccccccccccc-cccchHHH-HhhcccCCEEecCHHHHHHHhC
Confidence 368889988763334444566667666654 9999862 10000000 00000112 3678899999999999999998
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHHHc-C
Q 010240 166 GMQVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELAK-G 244 (514)
Q Consensus 166 ~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~~-g 244 (514)
.. +..++++.|.+.|++.|++|. ..| .+++++ +.++++.++++++||+||||+|+|+|++.|++ |
T Consensus 195 -~~-----~~~~~~~~l~~~g~~~vvvT~-~~G------~~~~~~-~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~~g 260 (298)
T 1vk4_A 195 -TN-----DLRESCRIIRSFGAKIILATH-ASG------VIVFDG-NFYEASFRSWSLEGRTGRGDTCTAAFLVGFVFKK 260 (298)
T ss_dssp -CS-----CHHHHHHHHHHTTCSSEEEEE-TTE------EEEESS-SEEEEECCCSSGGGGTTHHHHHHHHHHHHHHTSC
T ss_pred -CC-----CHHHHHHHHHhcCCCEEEEEc-CCC------cEEEeC-CEEEeccCCcccCCCcCccHHHHHHHHHHHHHcC
Confidence 22 456778888889999999999 876 677766 67778888888889999999999999999999 9
Q ss_pred CCHHHHHHHHHHHHHHHHhc
Q 010240 245 SPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 245 ~~l~~A~~~A~~~~~~~i~~ 264 (514)
+++++|+++|++++..+++.
T Consensus 261 ~~~~~a~~~A~a~aa~~v~~ 280 (298)
T 1vk4_A 261 MSIEKATKFAAAVTSVKMRH 280 (298)
T ss_dssp CCHHHHHHHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHHHHcc
Confidence 99999999999998877765
No 79
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=99.64 E-value=1.7e-15 Score=151.62 Aligned_cols=151 Identities=11% Similarity=0.047 Sum_probs=118.3
Q ss_pred CcCEEEEcccCCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCCCC
Q 010240 89 QVDVVKTGMLPSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGGMQ 168 (514)
Q Consensus 89 ~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~ 168 (514)
+++.+.++.. .++....+++.+++.+.+ +++||+++.. +++. +.+ +++++++|+++||..|++.|+| ..
T Consensus 148 ~~~~v~~~~~-~~~~~~~~~~~a~~~g~~-v~~D~~~~~~----~~~~---~~l-~~~l~~~dil~~N~~E~~~l~g-~~ 216 (334)
T 2pkf_A 148 KPELVIIGAN-DPEAMFLHTEECRKLGLA-FAADPSQQLA----RLSG---EEI-RRLVNGAAYLFTNDYEWDLLLS-KT 216 (334)
T ss_dssp SCSEEEEESC-CHHHHHHHHHHHHHHTCC-EEEECGGGGG----TSCH---HHH-HTTTTTCSEEEEEHHHHHHHHH-HH
T ss_pred CCCEEEEcCC-ChHHHHHHHHHHHhcCCe-EEEeccchhh----hhhH---HHH-HHHHhcCCEEecCHHHHHHHhc-cC
Confidence 5788887654 466777778888877765 9999988642 2232 334 4788999999999999999987 22
Q ss_pred CCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCe-EEEEeecccC-CCCCCCCcchHHHHHHHHHHcCCC
Q 010240 169 VVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGED-FHELRSSRVN-TRNTHGTGCTLASCIAAELAKGSP 246 (514)
Q Consensus 169 ~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~-~~~~~~~~~~-~~d~~GaGD~f~a~i~~~l~~g~~ 246 (514)
..+.+ .+.+. ++.|++|.|.+| .+++.+++ .++++.++++ ++|++||||+|+|+|++.|++|++
T Consensus 217 ~~~~~-------~l~~~-~~~vvvt~G~~G------~~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~a~~~~~l~~g~~ 282 (334)
T 2pkf_A 217 GWSEA-------DVMAQ-IDLRVTTLGPKG------VDLVEPDGTTIHVGVVPETSQTDPTGVGDAFRAGFLTGRSAGLG 282 (334)
T ss_dssp CCCHH-------HHHTT-CSCEEEECGGGC------EEEECTTSCEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCC
T ss_pred CCCHH-------HHHhc-CCEEEEEeCCCC------eEEEeCCCcEEEeCCcCCCCCCCCCCchHHHHHHHHHHHHcCCC
Confidence 22222 23443 789999999987 77777766 7888888876 679999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 010240 247 MLSAVKVAKCFVETALDY 264 (514)
Q Consensus 247 l~~A~~~A~~~~~~~i~~ 264 (514)
+++|+++|+++++.+++.
T Consensus 283 ~~~a~~~A~~~aa~~v~~ 300 (334)
T 2pkf_A 283 LERSAQLGSLVAVLVLES 300 (334)
T ss_dssp HHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 999999999998888775
No 80
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=99.64 E-value=5.2e-16 Score=153.64 Aligned_cols=139 Identities=19% Similarity=0.200 Sum_probs=117.9
Q ss_pred CcCEEEEcccCCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCCCC
Q 010240 89 QVDVVKTGMLPSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGGMQ 168 (514)
Q Consensus 89 ~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~ 168 (514)
+++.+.++...+.+.+..+++.+++.+.+ +++||+... ...+.+ +.+++++|+++||..|++.|++ .
T Consensus 143 ~~~~v~~~~~~~~~~~~~~~~~a~~~g~~-v~~D~~~~~---------~~~~~~-~~ll~~~dil~~N~~Ea~~l~g-~- 209 (310)
T 3go6_A 143 NCDVLLTQLEIPVATALAAARAAQSADAV-VMVNASPAG---------QDRSSL-QDLAAIADVVIANEHEANDWPS-P- 209 (310)
T ss_dssp TCSEEEECSSSCHHHHHHHHHHHHHTTCE-EEEECCSSS---------CCHHHH-HHHHHHCSEEEEEHHHHHHSSS-C-
T ss_pred cCCEEEECCCCCHHHHHHHHHHHHHcCCE-EEEcCCccc---------cchHHH-HHHHhhCCEEEeCHHHHHHHhC-C-
Confidence 58899998776788888999999888765 999996331 112333 3678899999999999999987 1
Q ss_pred CCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHHHc----C
Q 010240 169 VVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELAK----G 244 (514)
Q Consensus 169 ~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~~----g 244 (514)
++.|++|.|..| .+++++++.++++.++++++|++||||+|+|+|++.|++ |
T Consensus 210 ------------------~~~vvvt~G~~G------a~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~~~~~g 265 (310)
T 3go6_A 210 ------------------PTHFVITLGVRG------ARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSP 265 (310)
T ss_dssp ------------------CSEEEEECGGGC------EEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHCCSSSCCH
T ss_pred ------------------CCEEEEEECCCC------EEEEECCceEEeCCCCCCcCcCCCchHHHHHHHHHHHHhcccCC
Confidence 678999999988 788888888889999888899999999999999999999 9
Q ss_pred CCHHHHHHHHHHHHHHHHhc
Q 010240 245 SPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 245 ~~l~~A~~~A~~~~~~~i~~ 264 (514)
+++++|+++|++++..++++
T Consensus 266 ~~l~~a~~~A~~~aa~~v~~ 285 (310)
T 3go6_A 266 AERLRALRRACAAGALATLV 285 (310)
T ss_dssp HHHHHHHHHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHHHhCC
Confidence 99999999999998777664
No 81
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=99.63 E-value=2e-15 Score=150.54 Aligned_cols=152 Identities=12% Similarity=0.108 Sum_probs=118.1
Q ss_pred CCcCEEEEcccCCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCCC
Q 010240 88 MQVDVVKTGMLPSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGGM 167 (514)
Q Consensus 88 ~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~ 167 (514)
.+++.+.++.. .++....+++.+++.+.+ +++||+++.. +++. +.+ +++++++|+++||..|++.|+| .
T Consensus 134 ~~~~~v~~~~~-~~~~~~~~~~~a~~~g~~-v~~D~~~~~~----~~~~---~~~-~~~l~~~dil~~N~~Ea~~l~g-~ 202 (326)
T 3b1n_A 134 KDIKLAIVGPD-GFQGMVQHTEELAQAGVP-FIFDPGQGLP----LFDG---ATL-RRSIELATYIAVNDYEAKLVCD-K 202 (326)
T ss_dssp CSCSEEEECSC-CHHHHHHHHHHHHHHTCC-EEECCGGGGG----GCCH---HHH-HHHHHHCSEEEEEHHHHHHHHH-H
T ss_pred cCCCEEEECCc-cHHHHHHHHHHHHHCCCE-EEEeCchhhh----hccH---HHH-HHHHHhCCEEecCHHHHHHHhC-C
Confidence 35788888654 466777778888877765 9999987631 2232 233 3677889999999999999987 2
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccC-CCCCCCCcchHHHHHHHHHHcCCC
Q 010240 168 QVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVN-TRNTHGTGCTLASCIAAELAKGSP 246 (514)
Q Consensus 168 ~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~GaGD~f~a~i~~~l~~g~~ 246 (514)
...+.+ .+.+. ++.|++|.|.+| .+++++++.++++.++++ ++||+||||+|+|+|++.|++|++
T Consensus 203 ~~~~~~-------~l~~~-~~~vvvT~G~~G------a~~~~~~~~~~~~~~~v~~vvDttGAGDaF~ag~l~~l~~g~~ 268 (326)
T 3b1n_A 203 TGWSED-------EIASR-VQALIITRGEHG------ATIRHRDGTEQIPAVRAERVIDPTGCGDAFRGGLLYGIEHGFD 268 (326)
T ss_dssp HCCCHH-------HHHTT-SSEEEEECGGGC------EEEEETTEEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCC
T ss_pred CCCCHH-------HHHhc-CCEEEEecCCCc------eEEEECCcEEEeCCCCCCCCCCCCCchHHHHHHHHHHHHcCCC
Confidence 222222 23333 789999999988 788887777888888876 679999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 010240 247 MLSAVKVAKCFVETALDY 264 (514)
Q Consensus 247 l~~A~~~A~~~~~~~i~~ 264 (514)
+++|+++|++++..+++.
T Consensus 269 ~~~a~~~A~~~aa~~v~~ 286 (326)
T 3b1n_A 269 WATAGRLASLMGALKIAH 286 (326)
T ss_dssp HHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 999999999998877775
No 82
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=99.62 E-value=7.1e-15 Score=141.13 Aligned_cols=178 Identities=19% Similarity=0.147 Sum_probs=133.9
Q ss_pred CHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcC------cHHHHHhCCCCeEEeCCCCCCHH
Q 010240 319 SITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLIND------RIDIALACDADGVHLGQSDMPAR 392 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~------~~~~a~~~ga~gvhl~~~~~~~~ 392 (514)
+..+......++|++++.+-.... .+.--.+.+..+.+..+++++..+ +++.|.++|||+||+...+++..
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd~~---~f~Gs~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l~~~ 149 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTEQR---RFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQS 149 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCGG---GHHHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGSCHH
T ss_pred CHHHHHHHHHHcCCCEEEEecChh---hcCCCHHHHHHHHHhCCCCEEECccccCHHHHHHHHHcCCCEEEEecccCCHH
Confidence 456777788889999998843211 111112233333445567776544 38899999999999987666544
Q ss_pred HHH----hhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC--CCCEEEECCCC-
Q 010240 393 TAR----ALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS--KLPVVAIGGIG- 465 (514)
Q Consensus 393 ~~~----~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~--~~pv~a~GGi~- 465 (514)
..+ .....+..+.+++||.+|+..|.+.|+|||++++...+ ....+++.++++++.+ ++|+++.|||+
T Consensus 150 ~l~~l~~~a~~lGl~~lvev~t~ee~~~A~~~Gad~IGv~~r~l~-----~~~~dl~~~~~l~~~v~~~~pvVaegGI~t 224 (272)
T 3qja_A 150 VLVSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARDLM-----TLDVDRDCFARIAPGLPSSVIRIAESGVRG 224 (272)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEEESBCTT-----TCCBCTTHHHHHGGGSCTTSEEEEESCCCS
T ss_pred HHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHCCCCEEEECCCccc-----ccccCHHHHHHHHHhCcccCEEEEECCCCC
Confidence 332 22335777888999999999999999999999864321 1224678888888877 79999999998
Q ss_pred cccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHH
Q 010240 466 ISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLM 507 (514)
Q Consensus 466 ~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~ 507 (514)
++++..++++|++ ||.+|++|++++||.+.+++|.+..+
T Consensus 225 ~edv~~l~~~Gad---gvlVGsal~~a~dp~~~~~~l~~~~~ 263 (272)
T 3qja_A 225 TADLLAYAGAGAD---AVLVGEGLVTSGDPRAAVADLVTAGT 263 (272)
T ss_dssp HHHHHHHHHTTCS---EEEECHHHHTCSCHHHHHHHHHTTTT
T ss_pred HHHHHHHHHcCCC---EEEEcHHHhCCCCHHHHHHHHHhhhc
Confidence 9999999999999 99999999999999999999887643
No 83
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=99.61 E-value=8.3e-16 Score=151.08 Aligned_cols=185 Identities=21% Similarity=0.203 Sum_probs=136.0
Q ss_pred HHHHHHHHhCCCCEEEEEcCCCCHHHHH-------HHHHHHHHHHhhcCceEEEc------CcHHHHHhCCCCeEEeCCC
Q 010240 321 TDAVKAALEGGATIIQLREKDADTRGFL-------EAAKACLQICCVHGVPLLIN------DRIDIALACDADGVHLGQS 387 (514)
Q Consensus 321 ~~~~~~~~~~Gv~~v~lr~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~v~------~~~~~a~~~ga~gvhl~~~ 387 (514)
.+.++++.++|++++++|++- +.+... +..+.+.++++.++++++++ ++++.+.++|+|+||....
T Consensus 31 ~~~a~~~~~~Ga~~i~~~e~v-~~~~~~~~G~~~~~~~~~i~~i~~~~~~Pvi~~~~~~~~~~~~~~~~aGad~v~~~~~ 109 (297)
T 2zbt_A 31 PEQAVIAEEAGAVAVMALERV-PADIRAQGGVARMSDPKIIKEIMAAVSIPVMAKVRIGHFVEAMILEAIGVDFIDESEV 109 (297)
T ss_dssp HHHHHHHHHHTCSEEEECSSC-HHHHHHTTCCCCCCCHHHHHHHHTTCSSCEEEEEETTCHHHHHHHHHTTCSEEEEETT
T ss_pred HHHHHHHHHCCCcEEEecccc-chHHHhhcCCccCCCHHHHHHHHHhcCCCeEEEeccCCHHHHHHHHHCCCCEEeeeCC
Confidence 367788889999999998732 221100 12334566677778888764 4677888999999976542
Q ss_pred CCCHHHHHhhc--CCCcEEEEecCCHHHHHHhhhCCCcEEEe------ccccCCCCC---------------CC------
Q 010240 388 DMPARTARALL--GPDKIIGVSCKTPEEAHQAWIDGANYIGC------GGVYPTNTK---------------AN------ 438 (514)
Q Consensus 388 ~~~~~~~~~~~--~~~~~ig~s~~~~~e~~~a~~~g~d~v~~------~~vf~t~~k---------------~~------ 438 (514)
......++... ..+..+++.+||++++..+.+.|+|||.+ |++|++.+| +.
T Consensus 110 ~~~~~~~~~~~~~~~~i~l~~~v~~~~~~~~a~~~Gad~I~v~G~~~~g~~~e~~~~~~~~~~~i~~~~g~t~~~~~~~~ 189 (297)
T 2zbt_A 110 LTPADEEHHIDKWKFKVPFVCGARNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQSLREDELMAYA 189 (297)
T ss_dssp SCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECCCSSSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHH
T ss_pred CChHHHHHHHHHhCCCceEEeecCCHHHHHHHHHcCCCEEEEcccccCcchHHHHhhHHHHHHHHHHcCCcCCCCchhhh
Confidence 21111122221 12566677799999999999999999944 455554433 11
Q ss_pred -CccCCHHHHHHHHHcCCCCEE--EECCC-CcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 439 -NLTVGLDGLKTVCLASKLPVV--AIGGI-GISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 439 -~~~~g~~~l~~~~~~~~~pv~--a~GGi-~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
..+.+++.++++++..++|++ +.||| +++|+.+++++||+ +|.+||+|++++||.+.+++|++.+++.
T Consensus 190 ~~~~~~~~~i~~l~~~~~~pvi~~a~GGI~~~e~i~~~~~aGad---gvvvGsai~~~~dp~~~~~~l~~~i~~~ 261 (297)
T 2zbt_A 190 KEIGAPFELVKWVHDHGRLPVVNFAAGGIATPADAALMMHLGMD---GVFVGSGIFKSGDPRKRARAIVRAVAHY 261 (297)
T ss_dssp HHHTCCHHHHHHHHHHSSCSSCEEBCSSCCSHHHHHHHHHTTCS---EEEECGGGGGSSCHHHHHHHHHHHHHTT
T ss_pred hcchhhHHHHHHHHHhcCCCcEEEeeCCCCCHHHHHHHHHcCCC---EEEEchHHhCCCCHHHHHHHHHHHHHHH
Confidence 134578889999988889988 99999 89999999999999 9999999999999999999999988765
No 84
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=99.60 E-value=1.3e-15 Score=142.10 Aligned_cols=197 Identities=12% Similarity=0.050 Sum_probs=149.4
Q ss_pred EeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCCC----HHHHHHHHHHHHHHH--hhcCceEEEcC---cHHHHHhC
Q 010240 307 VTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDAD----TRGFLEAAKACLQIC--CVHGVPLLIND---RIDIALAC 377 (514)
Q Consensus 307 it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~~----~~~~~~~~~~~~~~~--~~~~~~l~v~~---~~~~a~~~ 377 (514)
|+|+-++- ...++.+.++.+.++|++++|++..+.. ...-...++.+++.+ ..+++++++++ +++...+
T Consensus 8 i~pSila~-D~~~l~~~i~~~~~~g~d~iHvDvmDg~fvpn~t~G~~~v~~lr~~~p~~~~dvhLmv~dp~~~i~~~~~- 85 (227)
T 1tqx_A 8 IAPSVLAS-NISKLAEETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTKSIFFDVHLMVEYPEKYVPLLKT- 85 (227)
T ss_dssp EEEBGGGS-CGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCCCHHHHHHHGGGCSSCEEEEEEESSCGGGGGGGCTT-
T ss_pred EEeehhcC-ChhhHHHHHHHHHHcCCCEEEEEEEeCCcCcchhcCHHHHHHHHHhCCCCcEEEEEEEcCHHHHHHHHHh-
Confidence 55554432 1246778888898999999999974322 111134566676666 45678899987 3344444
Q ss_pred CCCe--EEeCCCC-CCHHHHH---hhcCCCcEEEEecC--CHHHH-HHhhhC-CCcEEEeccccCCCCCCCCccCCHHHH
Q 010240 378 DADG--VHLGQSD-MPARTAR---ALLGPDKIIGVSCK--TPEEA-HQAWID-GANYIGCGGVYPTNTKANNLTVGLDGL 447 (514)
Q Consensus 378 ga~g--vhl~~~~-~~~~~~~---~~~~~~~~ig~s~~--~~~e~-~~a~~~-g~d~v~~~~vf~t~~k~~~~~~g~~~l 447 (514)
||. +|....+ .....++ ..+..+..+|++.+ |+.|. ....+. .+|||.++.|.|+...+...+..++.+
T Consensus 86 -Ad~itvH~ea~~~~~~~~i~~~~~i~~~G~k~gvalnp~tp~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~ki 164 (227)
T 1tqx_A 86 -SNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKV 164 (227)
T ss_dssp -SSEEEEEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECTTSCGGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHHH
T ss_pred -CCEEEEeecCCccCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHhhcCCcCEEEEeeeccCCCCcccchHHHHHH
Confidence 664 5998876 4455666 77778999999884 55554 444444 499999999999888766666788999
Q ss_pred HHHHHcC-CCCEEEECCCCcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 448 KTVCLAS-KLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 448 ~~~~~~~-~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
+++++.. ++++.+.|||+++|+.++.++||+ .+.+||+|++++||.+.+++|++.+++.
T Consensus 165 ~~lr~~~~~~~I~VdGGI~~~ti~~~~~aGAd---~~V~GsaIf~~~d~~~~i~~l~~~~~~~ 224 (227)
T 1tqx_A 165 SFLRKKYKNLNIQVDGGLNIETTEISASHGAN---IIVAGTSIFNAEDPKYVIDTMRVSVQKY 224 (227)
T ss_dssp HHHHHHCTTCEEEEESSCCHHHHHHHHHHTCC---EEEESHHHHTCSSHHHHHHHHHHHHHHC
T ss_pred HHHHHhccCCeEEEECCCCHHHHHHHHHcCCC---EEEEeHHHhCCCCHHHHHHHHHHHHHHH
Confidence 9999877 889999999999999999999999 9999999999999999999999877653
No 85
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=99.60 E-value=3.9e-15 Score=144.55 Aligned_cols=148 Identities=20% Similarity=0.290 Sum_probs=126.0
Q ss_pred HHHHHHHhCCCCEE--EEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHHHHHhhcC
Q 010240 322 DAVKAALEGGATII--QLREKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPARTARALLG 399 (514)
Q Consensus 322 ~~~~~~~~~Gv~~v--~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~~~~~~~~ 399 (514)
+.++.+++.|++.| ++|.+..+..++.+.++++.+.|+++++++++. .+++|+|+. .
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~--------~~~~G~~l~-~------------ 161 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAM--------MYPRGKHIQ-N------------ 161 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEE--------EEECSTTCS-C------------
T ss_pred HHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEE--------eCCCCcccC-C------------
Confidence 45778899999999 999999998888999999999999999999883 124577762 1
Q ss_pred CCcEEEEecCCHHHH-HHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCccc-------HHH
Q 010240 400 PDKIIGVSCKTPEEA-HQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGISN-------ASD 471 (514)
Q Consensus 400 ~~~~ig~s~~~~~e~-~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~~~-------~~~ 471 (514)
+.++|+++++ +.|.+.|+|||.+++ +.+++.++++++.+++||++.|||+.+| +.+
T Consensus 162 -----~~~~~~~~~~a~~a~~~Gad~i~~~~-----------~~~~~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~~~ 225 (273)
T 2qjg_A 162 -----ERDPELVAHAARLGAELGADIVKTSY-----------TGDIDSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMIKD 225 (273)
T ss_dssp -----TTCHHHHHHHHHHHHHTTCSEEEECC-----------CSSHHHHHHHHHHCSSCEEEECCSCCSSHHHHHHHHHH
T ss_pred -----CCCHhHHHHHHHHHHHcCCCEEEECC-----------CCCHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHH
Confidence 1245667776 889999999998873 1589999999988899999999999877 888
Q ss_pred HHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 472 VMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 472 ~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
++++|++ ||+++++||++++|.+.+++|++.+++.
T Consensus 226 ~~~~Ga~---gv~vg~~i~~~~~~~~~~~~l~~~~~~~ 260 (273)
T 2qjg_A 226 AMEAGAA---GVAVGRNIFQHDDVVGITRAVCKIVHEN 260 (273)
T ss_dssp HHHHTCS---EEECCHHHHTSSSHHHHHHHHHHHHHHC
T ss_pred HHHcCCc---EEEeeHHhhCCCCHHHHHHHHHHHHhcC
Confidence 8899999 9999999999999999999999998764
No 86
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.59 E-value=1e-14 Score=137.27 Aligned_cols=171 Identities=23% Similarity=0.203 Sum_probs=129.4
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEE-------------Ec---CcHHHHHhCCCCe
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLL-------------IN---DRIDIALACDADG 381 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------------v~---~~~~~a~~~ga~g 381 (514)
+...+.++++.++|++++++. +. +.++.++ +..+.+++ +. ++++.+.+.|+++
T Consensus 23 ~~~~~~a~~~~~~Ga~~i~~~----~~----~~i~~i~---~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~ 91 (223)
T 1y0e_A 23 FIMSKMALAAYEGGAVGIRAN----TK----EDILAIK---ETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEV 91 (223)
T ss_dssp HHHHHHHHHHHHHTCSEEEEE----SH----HHHHHHH---HHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSE
T ss_pred ccHHHHHHHHHHCCCeeeccC----CH----HHHHHHH---HhcCCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCE
Confidence 456778888889999999884 22 2233333 33455553 11 2456788899999
Q ss_pred EEeCCCCC-----C----HHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCC--ccCCHHHHHHH
Q 010240 382 VHLGQSDM-----P----ARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANN--LTVGLDGLKTV 450 (514)
Q Consensus 382 vhl~~~~~-----~----~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~--~~~g~~~l~~~ 450 (514)
+|+..... . ...+++.+ ++..++.++||++|+.++.+.|+||+.+++.+.|..+.+. ...+++.++++
T Consensus 92 v~l~~~~~~~p~~~~~~~i~~~~~~~-~~~~v~~~~~t~~e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~ 170 (223)
T 1y0e_A 92 IALDATLQQRPKETLDELVSYIRTHA-PNVEIMADIATVEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDV 170 (223)
T ss_dssp EEEECSCSCCSSSCHHHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHH
T ss_pred EEEeeecccCcccCHHHHHHHHHHhC-CCceEEecCCCHHHHHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHH
Confidence 99876542 1 22344444 4889999999999999999999999999887766655433 33457889999
Q ss_pred HHcCCCCEEEECCC-CcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHH
Q 010240 451 CLASKLPVVAIGGI-GISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVL 506 (514)
Q Consensus 451 ~~~~~~pv~a~GGi-~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~ 506 (514)
++.+++||++.||| +++++.+++++|++ +|++|++|+. |....++|++.+
T Consensus 171 ~~~~~ipvia~GGI~~~~~~~~~~~~Gad---~v~vG~al~~---p~~~~~~~~~~~ 221 (223)
T 1y0e_A 171 LQSVDAKVIAEGNVITPDMYKRVMDLGVH---CSVVGGAITR---PKEITKRFVQVM 221 (223)
T ss_dssp HHHCCSEEEEESSCCSHHHHHHHHHTTCS---EEEECHHHHC---HHHHHHHHHHTT
T ss_pred HhhCCCCEEEecCCCCHHHHHHHHHcCCC---EEEEChHHcC---cHHHHHHHHHHh
Confidence 98889999999999 89999999999999 9999999995 777888777654
No 87
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=99.59 E-value=5.5e-15 Score=137.39 Aligned_cols=188 Identities=19% Similarity=0.151 Sum_probs=125.1
Q ss_pred eEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhc-CceEE----EcC----cHHH
Q 010240 303 FLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVH-GVPLL----IND----RIDI 373 (514)
Q Consensus 303 ~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~-~~~l~----v~~----~~~~ 373 (514)
+|++-.|... .++..+.++++.+ |++++++..... ...-.+.++++++ .+ +.+++ +.+ .++.
T Consensus 2 ~li~a~d~~~----~~~~~~~~~~~~~-~v~~iev~~~~~-~~~g~~~i~~l~~---~~~~~~i~~~l~~~di~~~~~~~ 72 (207)
T 3ajx_A 2 KLQVAIDLLS----TEAALELAGKVAE-YVDIIELGTPLI-KAEGLSVITAVKK---AHPDKIVFADMKTMDAGELEADI 72 (207)
T ss_dssp EEEEEECCSC----HHHHHHHHHHHGG-GCSEEEECHHHH-HHHCTHHHHHHHH---HSTTSEEEEEEEECSCHHHHHHH
T ss_pred eEEEEeCCCC----HHHHHHHHHHhhc-cCCEEEECcHHH-HhhCHHHHHHHHH---hCCCCeEEEEEEecCccHHHHHH
Confidence 4555556332 2467777777766 899999955421 1111223344433 33 45544 343 3678
Q ss_pred HHhCCCCeEEe--CCCCCCHHHHHh-hcCCCcEEEEecC---CHHH-HHHhhhCCCcEEEeccccCCCCCCCCccCCHHH
Q 010240 374 ALACDADGVHL--GQSDMPARTARA-LLGPDKIIGVSCK---TPEE-AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDG 446 (514)
Q Consensus 374 a~~~ga~gvhl--~~~~~~~~~~~~-~~~~~~~ig~s~~---~~~e-~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~ 446 (514)
+.++|+|++|+ ...+......++ ....+..+|++++ |+++ +..+.+.|+|||.+.+.+.+. +.+..+.+ +.
T Consensus 73 a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~gv~~~s~~~p~~~~~~~~~~g~d~v~~~~~~~~~-~~g~~~~~-~~ 150 (207)
T 3ajx_A 73 AFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVVVDLIGIEDKATRAQEVRALGAKFVEMHAGLDEQ-AKPGFDLN-GL 150 (207)
T ss_dssp HHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHTTCSEEEEECCHHHH-TSTTCCTH-HH
T ss_pred HHhCCCCEEEEeccCChHHHHHHHHHHHHcCCceEEEEecCCChHHHHHHHHHhCCCEEEEEeccccc-ccCCCchH-HH
Confidence 99999999954 433222222222 2222556788887 6777 566667899999555544311 12223344 77
Q ss_pred HHHHHHcCCCCEEEECCCCcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHH
Q 010240 447 LKTVCLASKLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAV 505 (514)
Q Consensus 447 l~~~~~~~~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~ 505 (514)
++++++. ++|+++.|||+++|+.+++++|++ ++++||+|++++||.+.+++|++.
T Consensus 151 i~~~~~~-~~pi~v~GGI~~~~~~~~~~aGad---~vvvGsaI~~~~dp~~~~~~~~~~ 205 (207)
T 3ajx_A 151 LAAGEKA-RVPFSVAGGVKVATIPAVQKAGAE---VAVAGGAIYGAADPAAAAKELRAA 205 (207)
T ss_dssp HHHHHHH-TSCEEEESSCCGGGHHHHHHTTCS---EEEESHHHHTSSSHHHHHHHHHHT
T ss_pred HHHhhCC-CCCEEEECCcCHHHHHHHHHcCCC---EEEEeeeccCCCCHHHHHHHHHHH
Confidence 8877765 799999999999999999999999 999999999999999999998764
No 88
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=99.59 E-value=1.1e-14 Score=146.63 Aligned_cols=165 Identities=12% Similarity=0.111 Sum_probs=111.5
Q ss_pred CcCEEEEccc---CC---HHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHH
Q 010240 89 QVDVVKTGML---PS---TDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASA 162 (514)
Q Consensus 89 ~~~~i~~G~~---~~---~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~ 162 (514)
+++.+.++.. .+ .+.+..+++.+++.+.+ +++||+++. .+++.+......+++++++|+++||+.|+..
T Consensus 150 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~ak~~g~~-v~~D~n~r~----~lw~~~~~~~~~~~~l~~~dil~~N~~Ea~~ 224 (351)
T 4gm6_A 150 GIRVLHVSGITIALSTFWLEMVVKIIREAKRNGIK-ISFDMNYRA----KLWELEAAKRAYQQLLPLVDYCSAGQMDAVA 224 (351)
T ss_dssp TEEEEEEEHHHHHHCHHHHHHHHHHHHHHHHTTCE-EEEECCCCT----TTSCHHHHHHHHHHHGGGCSEEECCHHHHHH
T ss_pred hcccceecccchhhchhHHHHHHHHHHHHHHcCCC-cccCCCcCc----hhhhhhhHHHHHHHHHHhCCccccCHHHHHH
Confidence 4666766431 12 35567778888888876 999998875 3556655555556889999999999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHh----cCCCeEEEecccCCCCCCceEEEEeCCeEEEEeeccc-CCCCCCCCcchHHHHH
Q 010240 163 LLGGMQVVTVADMCSAAKLLHN----LGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRV-NTRNTHGTGCTLASCI 237 (514)
Q Consensus 163 L~g~~~~~~~~~~~~~a~~l~~----~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~GaGD~f~a~i 237 (514)
|++ ...+..+......+.+.. .+.+.++++.+..+ ....++..++.++.+..++ +++||+||||+|.|+|
T Consensus 225 l~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~VvDttGAGDaF~ag~ 299 (351)
T 4gm6_A 225 FFE-ISSETTDYYQAMHDKYPNIELFYATKRTVISASHHL----LQGHLWTQGECWESEEYAIYPIVDRVGGGDAYTAAV 299 (351)
T ss_dssp TSC-CCTTCSCHHHHHHHHCTTCCEEEEEEEEEEETTEEE----EEEEEEETTEEEEEEEEEECSCSCCTTHHHHHHHHH
T ss_pred HhC-CCCchhHHHHHHHhhhhhhhhhhccccceeeeccCC----ceEEEEeCCceEEeCCCCCCCcCCCCChhHHHHHHH
Confidence 998 332222222222222111 12233444433311 1145666676666666554 6889999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHh
Q 010240 238 AAELAKGSPMLSAVKVAKCFVETALD 263 (514)
Q Consensus 238 ~~~l~~g~~l~~A~~~A~~~~~~~i~ 263 (514)
++.|++|+++++|+++|++++..++.
T Consensus 300 l~~l~~g~~~~~al~~A~aaaal~v~ 325 (351)
T 4gm6_A 300 LHGILSEWRPDETVKFATAAAGLKHS 325 (351)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999555544
No 89
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=99.59 E-value=1.9e-15 Score=142.17 Aligned_cols=200 Identities=17% Similarity=0.115 Sum_probs=149.4
Q ss_pred EEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCCCH----HHHHHHHHHHHHHH--hhcCceEEEcC---cHHHHH
Q 010240 305 YAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDADT----RGFLEAAKACLQIC--CVHGVPLLIND---RIDIAL 375 (514)
Q Consensus 305 y~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~~~----~~~~~~~~~~~~~~--~~~~~~l~v~~---~~~~a~ 375 (514)
+.|+|+-++-. ...+.+.++.+.++|++++++...+..- ..=...++.+++.+ ..+++++++++ +++.+.
T Consensus 28 ~~i~pSilsaD-~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~i~~~~ 106 (246)
T 3inp_A 28 IQINPSILSAD-LARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDALIESFA 106 (246)
T ss_dssp CEEEEBGGGSC-GGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSSCHHHHHHHH
T ss_pred CeeehhhhcCC-hhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCCHHHHHHHHH
Confidence 46778765432 2457888999999999999997754321 11124455566655 34577888874 677888
Q ss_pred hCCCCeEEeCCCCC--CHHHHHhhcCCCcEEEEecC--CHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHH
Q 010240 376 ACDADGVHLGQSDM--PARTARALLGPDKIIGVSCK--TPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVC 451 (514)
Q Consensus 376 ~~ga~gvhl~~~~~--~~~~~~~~~~~~~~ig~s~~--~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~ 451 (514)
++|||.+++..... ....++.....+..+|++.+ |+.|..+.....+|||.++.|.|+...+...+..++.+++++
T Consensus 107 ~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~vD~VlvMsV~PGfgGQ~fi~~~l~KI~~lr 186 (246)
T 3inp_A 107 KAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGFGGQKFIPAMLDKAKEIS 186 (246)
T ss_dssp HHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGCSEEEEECSCTTC--CCCCTTHHHHHHHHH
T ss_pred HcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcCCEEEEeeecCCCCCcccchHHHHHHHHHH
Confidence 99999998876533 23455666667889998886 555555445557999999999987755545556788888887
Q ss_pred HcC-----CCCEEEECCCCcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHH
Q 010240 452 LAS-----KLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMD 508 (514)
Q Consensus 452 ~~~-----~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~ 508 (514)
+.. ++++.+.|||+++|+.++.++||+ .+.+||+|++++||.++++++++.+.+
T Consensus 187 ~~~~~~~~~~~I~VDGGI~~~ti~~~~~aGAD---~~V~GSaIf~a~dp~~~i~~l~~~i~~ 245 (246)
T 3inp_A 187 KWISSTDRDILLEIDGGVNPYNIAEIAVCGVN---AFVAGSAIFNSDSYKQTIDKMRDELNK 245 (246)
T ss_dssp HHHHHHTSCCEEEEESSCCTTTHHHHHTTTCC---EEEESHHHHTSSCHHHHHHHHHHHHHT
T ss_pred HHHHhcCCCeeEEEECCcCHHHHHHHHHcCCC---EEEEehHHhCCCCHHHHHHHHHHHHhh
Confidence 643 589999999999999999999999 999999999999999999999988754
No 90
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=99.59 E-value=5.4e-15 Score=150.14 Aligned_cols=160 Identities=16% Similarity=0.224 Sum_probs=113.9
Q ss_pred cCEEEE-cccC--CHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCC
Q 010240 90 VDVVKT-GMLP--STDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGG 166 (514)
Q Consensus 90 ~~~i~~-G~~~--~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~ 166 (514)
++.+.+ |+.. ..+.+..+++.+++.+.+ +++||... .+.....+.+ .++++++|+++||+.|++.|++
T Consensus 181 a~~~~~~g~~~~~~~~~~~~~~~~a~~~g~~-v~ldls~~------~~~~~~~~~l-~~ll~~~Dil~~Ne~Ea~~l~~- 251 (372)
T 3uq6_A 181 AQVYYIAGFVINTCYEGMLKIAKHSLENEKL-FCFNLSAP------FLSQFNTKEV-DEMISYSNIVFGNESEAEAYGE- 251 (372)
T ss_dssp CSEEEEEGGGHHHHHHHHHHHHHHHHHTTCE-EEEECCCH------HHHHHCHHHH-HHHHTTCSEEEEEHHHHHHHHH-
T ss_pred ccEEEEecccccccHHHHHHHHHHHHHcCCe-Eeeccccc------hhhhhhHHHH-HHHhhcCCcccCCHHHHHHHhC-
Confidence 566655 4442 245667777888888776 99996311 0001111233 3678999999999999999987
Q ss_pred CCCCCHHHHHHHHHHHHh-------cCCCeEEEecccCCCCCCceEEEEeCCe--EEEEeecc---cCCCCCCCCcchHH
Q 010240 167 MQVVTVADMCSAAKLLHN-------LGPRTVLVKGGDLPDSSDAVDIFFDGED--FHELRSSR---VNTRNTHGTGCTLA 234 (514)
Q Consensus 167 ~~~~~~~~~~~~a~~l~~-------~g~~~Vvvt~g~~g~~~~~~~~~~~~~~--~~~~~~~~---~~~~d~~GaGD~f~ 234 (514)
......++..++++.+.+ .+.+.|++|.|.+| .+++++++ ...++.++ .+++||+||||+|+
T Consensus 252 ~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~vvvT~G~~G------~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~ 325 (372)
T 3uq6_A 252 VHGLLEDTVHATARYIADLPFADGKKRKRLVIITRGKNP------LLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFA 325 (372)
T ss_dssp HTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEE------EEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHH
T ss_pred CCCCchhHHHHHHHHHhhhhhhhhcCCceEEEEcCCCCc------eEEecCCCceeeeeeccCCCCCceeCCCchHHHHH
Confidence 322233456667777654 35678999999877 67776543 23343332 35789999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHhc
Q 010240 235 SCIAAELAKGSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 235 a~i~~~l~~g~~l~~A~~~A~~~~~~~i~~ 264 (514)
|+|++.|.+|+++++|+++|+.+++.++++
T Consensus 326 agfl~~l~~g~~l~~a~~~a~~aAa~vv~~ 355 (372)
T 3uq6_A 326 AGFIADYIRGKPMITSLHAAVKAAAYIICR 355 (372)
T ss_dssp HHHHHHHTTTCCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999998888875
No 91
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=99.58 E-value=4.5e-16 Score=148.34 Aligned_cols=168 Identities=18% Similarity=0.111 Sum_probs=129.2
Q ss_pred CHHHHHHHHHhCCCCEEEEE-cCC---CCHHHHHHHHHHHHHHHhhcCceEEEcC------cHHHHHhCCCCeEEeCCCC
Q 010240 319 SITDAVKAALEGGATIIQLR-EKD---ADTRGFLEAAKACLQICCVHGVPLLIND------RIDIALACDADGVHLGQSD 388 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr-~~~---~~~~~~~~~~~~~~~~~~~~~~~l~v~~------~~~~a~~~ga~gvhl~~~~ 388 (514)
+..+.++...++|++++++- ++. .+.+ .+..+++..+++++..+ +++.+.++|||+||+....
T Consensus 66 ~p~~~A~~~~~~GA~~isvlt~~~~f~G~~~-------~l~~i~~~v~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~ 138 (254)
T 1vc4_A 66 DPVEAALAYARGGARAVSVLTEPHRFGGSLL-------DLKRVREAVDLPLLRKDFVVDPFMLEEARAFGASAALLIVAL 138 (254)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCCSSSCCCHH-------HHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecchhhhccCHH-------HHHHHHHhcCCCEEECCcCCCHHHHHHHHHcCCCEEEECccc
Confidence 45788888999999999992 221 2322 23344456788866544 5677999999999998876
Q ss_pred CCHHHHHhhcC----CCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-----CCCEE
Q 010240 389 MPARTARALLG----PDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-----KLPVV 459 (514)
Q Consensus 389 ~~~~~~~~~~~----~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-----~~pv~ 459 (514)
++ ..++.... .+..+-+.+||.+|+..|.+.|+||+++++.+.+..+ .+++.+.++++.+ ++|++
T Consensus 139 l~-~~l~~l~~~a~~lGl~~lvev~~~~E~~~a~~~gad~IGvn~~~l~~~~-----~dl~~~~~L~~~i~~~~~~~~vI 212 (254)
T 1vc4_A 139 LG-ELTGAYLEEARRLGLEALVEVHTERELEIALEAGAEVLGINNRDLATLH-----INLETAPRLGRLARKRGFGGVLV 212 (254)
T ss_dssp HG-GGHHHHHHHHHHHTCEEEEEECSHHHHHHHHHHTCSEEEEESBCTTTCC-----BCTTHHHHHHHHHHHTTCCSEEE
T ss_pred hH-HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCCEEEEccccCcCCC-----CCHHHHHHHHHhCccccCCCeEE
Confidence 55 44443322 2455556799999999999999999999998875432 3456666666554 78999
Q ss_pred EECCCC-cccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHH
Q 010240 460 AIGGIG-ISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLH 503 (514)
Q Consensus 460 a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~ 503 (514)
+.|||+ ++++..+++ |++ ||.+|++|+.++||.+.+++|.
T Consensus 213 AegGI~s~~dv~~l~~-Ga~---gvlVGsAl~~~~d~~~~~~~l~ 253 (254)
T 1vc4_A 213 AESGYSRKEELKALEG-LFD---AVLIGTSLMRAPDLEAALRELV 253 (254)
T ss_dssp EESCCCSHHHHHTTTT-TCS---EEEECHHHHTSSCHHHHHHHHH
T ss_pred EEcCCCCHHHHHHHHc-CCC---EEEEeHHHcCCCCHHHHHHHHh
Confidence 999998 999999999 999 9999999999999999998875
No 92
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=99.57 E-value=1.6e-14 Score=138.47 Aligned_cols=147 Identities=17% Similarity=0.185 Sum_probs=120.9
Q ss_pred HHHHHHhCCCCEEEEEc--CCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHHHHHhhcCC
Q 010240 323 AVKAALEGGATIIQLRE--KDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPARTARALLGP 400 (514)
Q Consensus 323 ~~~~~~~~Gv~~v~lr~--~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~~~~~~~~~ 400 (514)
.++++++.|++.|++|. ++.+..+..+.++++.+.|++++++++++.+ ++|+|+++..
T Consensus 97 ~ve~Ai~~Ga~~v~~~~nig~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~--------~~G~~~~~~~------------ 156 (263)
T 1w8s_A 97 SVEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVESF--------PRGGKVVNET------------ 156 (263)
T ss_dssp CHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHHHTCCEEEEEC--------CCSTTCCCTT------------
T ss_pred HHHHHHHCCCCEEEEEEecCCcCHHHHHHHHHHHHHHHHHcCCeEEEEee--------CCCCccccCC------------
Confidence 47789999999999999 7778888899999999999999999999854 3566774310
Q ss_pred CcEEEEecCCHHH-HHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCC-CEEEECCCCcc-------cHHH
Q 010240 401 DKIIGVSCKTPEE-AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKL-PVVAIGGIGIS-------NASD 471 (514)
Q Consensus 401 ~~~ig~s~~~~~e-~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~-pv~a~GGi~~~-------~~~~ 471 (514)
+.+...+ ++.|.+.|+|||.++ |+ .+++.++++++.++. ||+++|||+.+ ++..
T Consensus 157 ------s~~~i~~a~~~a~~~GAD~vkt~--~~---------~~~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~ 219 (263)
T 1w8s_A 157 ------APEIVAYAARIALELGADAMKIK--YT---------GDPKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEG 219 (263)
T ss_dssp ------CHHHHHHHHHHHHHHTCSEEEEE--CC---------SSHHHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHH
T ss_pred ------CHHHHHHHHHHHHHcCCCEEEEc--CC---------CCHHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 2333333 467789999999887 32 268999999987777 99999999876 7888
Q ss_pred HHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 472 VMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 472 ~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
++++|++ |+++|++||+++||.+.+++|++.+++.
T Consensus 220 ~~~aGA~---GvsvgraI~~~~dp~~~~~~l~~~v~~~ 254 (263)
T 1w8s_A 220 VLEAGAL---GIAVGRNVWQRRDALKFARALAELVYGG 254 (263)
T ss_dssp HHHTTCC---EEEESHHHHTSTTHHHHHHHHHHHHC--
T ss_pred HHHcCCe---EEEEehhhcCCcCHHHHHHHHHHHHhcC
Confidence 8899999 9999999999999999999999998764
No 93
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=99.57 E-value=7.5e-15 Score=136.27 Aligned_cols=173 Identities=18% Similarity=0.205 Sum_probs=127.2
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEE---c--CcHHHHHhCCCCeEEeCCCCCCHH
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLI---N--DRIDIALACDADGVHLGQSDMPAR 392 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v---~--~~~~~a~~~ga~gvhl~~~~~~~~ 392 (514)
++..+.++.+.++|++++++........+ .++.+++... .+..+-+ . +..+.+.+.|+|++ +.... ...
T Consensus 22 ~~~~~~~~~~~~~G~~~iev~~~~~~~~~---~i~~ir~~~~-~~~~ig~~~v~~~~~~~~a~~~Gad~i-v~~~~-~~~ 95 (205)
T 1wa3_A 22 EEAKEKALAVFEGGVHLIEITFTVPDADT---VIKELSFLKE-KGAIIGAGTVTSVEQCRKAVESGAEFI-VSPHL-DEE 95 (205)
T ss_dssp HHHHHHHHHHHHTTCCEEEEETTSTTHHH---HHHHTHHHHH-TTCEEEEESCCSHHHHHHHHHHTCSEE-ECSSC-CHH
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCChhHHH---HHHHHHHHCC-CCcEEEecccCCHHHHHHHHHcCCCEE-EcCCC-CHH
Confidence 46788888999999999999766544433 3344444332 1333333 1 24566778999999 54332 222
Q ss_pred HHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEEECCCCcccHHH
Q 010240 393 TARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVAIGGIGISNASD 471 (514)
Q Consensus 393 ~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a~GGi~~~~~~~ 471 (514)
.++.....+..+...++|++|+.+|.+.|+|++ ++++ ....|++.++++++.+ ++||++.|||+++|+.+
T Consensus 96 ~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~v---k~~~------~~~~g~~~~~~l~~~~~~~pvia~GGI~~~~~~~ 166 (205)
T 1wa3_A 96 ISQFCKEKGVFYMPGVMTPTELVKAMKLGHTIL---KLFP------GEVVGPQFVKAMKGPFPNVKFVPTGGVNLDNVCE 166 (205)
T ss_dssp HHHHHHHHTCEEECEECSHHHHHHHHHTTCCEE---EETT------HHHHHHHHHHHHHTTCTTCEEEEBSSCCTTTHHH
T ss_pred HHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEE---EEcC------ccccCHHHHHHHHHhCCCCcEEEcCCCCHHHHHH
Confidence 222222234455556899999999999999999 4444 2235789999999888 89999999999999999
Q ss_pred HHHCCCCCCceEEEeecccCCCC---HHHHHHHHHHHHHHH
Q 010240 472 VMKIGVSNLKGVAVVSALFDREC---ILPESKKLHAVLMDA 509 (514)
Q Consensus 472 ~~~~Ga~~~~gva~~~~i~~~~~---~~~~~~~~~~~~~~~ 509 (514)
++++|++ +|++||+|+. +| |.+.++++++.+++.
T Consensus 167 ~~~~Ga~---~v~vGs~i~~-~d~~~~~~~~~~~~~~~~~~ 203 (205)
T 1wa3_A 167 WFKAGVL---AVGVGSALVK-GTPDEVREKAKAFVEKIRGC 203 (205)
T ss_dssp HHHHTCS---CEEECHHHHC-SCHHHHHHHHHHHHHHHHHC
T ss_pred HHHCCCC---EEEECccccC-CCHHHHHHHHHHHHHHHHhh
Confidence 9999999 9999999999 88 999999999888764
No 94
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=99.57 E-value=1.9e-14 Score=138.02 Aligned_cols=179 Identities=19% Similarity=0.160 Sum_probs=135.2
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEE------cCcHHHHHhCCCCeEEeCCCCCC-
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLI------NDRIDIALACDADGVHLGQSDMP- 390 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v------~~~~~~a~~~ga~gvhl~~~~~~- 390 (514)
.+..+.++.+.++|++.++++++.............+.++++..++++++ .++++.+.+.|||+||++...+.
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~ 110 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVFLDISATHEERAILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAVRR 110 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHC
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEChHHHhC
Confidence 46788888999999999999987754322233445566777788999998 55678888999999999885432
Q ss_pred ---HHHHHhhcCCC-cEEEEecCC--------------------HHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHH
Q 010240 391 ---ARTARALLGPD-KIIGVSCKT--------------------PEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDG 446 (514)
Q Consensus 391 ---~~~~~~~~~~~-~~ig~s~~~--------------------~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~ 446 (514)
...+.+.++.. ..++++|++ .+++.++.+.|++.+++.....+.+ ....+++.
T Consensus 111 p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~---~~g~~~~~ 187 (252)
T 1ka9_F 111 PELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVELGAGEILLTSMDRDGT---KEGYDLRL 187 (252)
T ss_dssp THHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHHTCCEEEEEETTTTTT---CSCCCHHH
T ss_pred cHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHcCCCEEEEecccCCCC---cCCCCHHH
Confidence 33444444433 468888852 5678899999999997764433222 12246999
Q ss_pred HHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccCCC-CHHHHHHHH
Q 010240 447 LKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFDRE-CILPESKKL 502 (514)
Q Consensus 447 l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~~-~~~~~~~~~ 502 (514)
++++++..++||+|.|||+ ++++.+++++|++ |+++|++|+..+ ++.+..+.+
T Consensus 188 i~~l~~~~~ipvia~GGI~~~~d~~~~~~~Gad---gv~vgsal~~~~~~~~~~~~~l 242 (252)
T 1ka9_F 188 TRMVAEAVGVPVIASGGAGRMEHFLEAFQAGAE---AALAASVFHFGEIPIPKLKRYL 242 (252)
T ss_dssp HHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCS---EEEESHHHHTTSSCHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeCCCCCHHHHHHHHHCCCH---HHHHHHHHHcCCCCHHHHHHHH
Confidence 9999998899999999998 6999999999999 999999999887 666655544
No 95
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=99.57 E-value=1.9e-14 Score=134.91 Aligned_cols=201 Identities=13% Similarity=0.097 Sum_probs=148.3
Q ss_pred EEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCCC----HHHHHHHHHHHHHHH---hhcCceEEEc---CcHHHHH
Q 010240 306 AVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDAD----TRGFLEAAKACLQIC---CVHGVPLLIN---DRIDIAL 375 (514)
Q Consensus 306 ~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~~----~~~~~~~~~~~~~~~---~~~~~~l~v~---~~~~~a~ 375 (514)
.|+|+-++-. ...+.+.++.+.+.|++++++.-.+.. ...=...++.+++.+ ..++++++++ ++++.+.
T Consensus 6 ~i~psil~~D-~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~~~ 84 (228)
T 3ovp_A 6 KIGPSILNSD-LANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMA 84 (228)
T ss_dssp EEEEBCTTSC-GGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGGGGHHHHH
T ss_pred EeeeeheeCC-chhHHHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCHHHHHHHHH
Confidence 3556544431 245778888898999999999654332 111123455565553 2357788887 4788889
Q ss_pred hCCCCeEEeCCCCCC--HHHHHhhcCCCcEEEEecC--CHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHH
Q 010240 376 ACDADGVHLGQSDMP--ARTARALLGPDKIIGVSCK--TPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVC 451 (514)
Q Consensus 376 ~~ga~gvhl~~~~~~--~~~~~~~~~~~~~ig~s~~--~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~ 451 (514)
++|+|++++...... ...++.....+..+|++.+ |+.|..+.....+|||.+..+.|....+...+..++.+++++
T Consensus 85 ~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~~~D~Vl~msv~pGf~Gq~f~~~~l~ki~~lr 164 (228)
T 3ovp_A 85 VAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLR 164 (228)
T ss_dssp HHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGGGCSEEEEESSCTTTCSCCCCGGGHHHHHHHH
T ss_pred HcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhccCCeEEEeeecCCCCCcccCHHHHHHHHHHH
Confidence 999999977664322 2344555556778888886 444444444445999999999887655555556788899998
Q ss_pred HcC-CCCEEEECCCCcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHHh
Q 010240 452 LAS-KLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDAV 510 (514)
Q Consensus 452 ~~~-~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~~ 510 (514)
+.. +.|+.+.|||+++|+.++.++||+ ++.+||+|++++||.++++++++.+.++.
T Consensus 165 ~~~~~~~I~VdGGI~~~t~~~~~~aGAd---~~VvGsaIf~a~dp~~~~~~l~~~~~~~~ 221 (228)
T 3ovp_A 165 TQFPSLDIEVDGGVGPDTVHKCAEAGAN---MIVSGSAIMRSEDPRSVINLLRNVCSEAA 221 (228)
T ss_dssp HHCTTCEEEEESSCSTTTHHHHHHHTCC---EEEESHHHHTCSCHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCEEEeCCcCHHHHHHHHHcCCC---EEEEeHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 876 689999999999999999999999 99999999999999999999999988764
No 96
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=99.57 E-value=5.1e-15 Score=138.78 Aligned_cols=187 Identities=17% Similarity=0.119 Sum_probs=142.5
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCC----HHHHHHHHHHHHHHH-hhcCceEEEcC---cHHHHHhCCCCeEEeCCCC-
Q 010240 318 RSITDAVKAALEGGATIIQLREKDAD----TRGFLEAAKACLQIC-CVHGVPLLIND---RIDIALACDADGVHLGQSD- 388 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~----~~~~~~~~~~~~~~~-~~~~~~l~v~~---~~~~a~~~ga~gvhl~~~~- 388 (514)
.++.+.++.+ ++|++++|+...+.. -..-...++.+++.+ ..+++++++.+ +++.+.++|||++++....
T Consensus 13 ~~l~~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~~~~~dvhLmv~dp~~~i~~~~~aGAd~itvh~Ea~ 91 (231)
T 3ctl_A 13 LKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAGADFITLHPETI 91 (231)
T ss_dssp GGHHHHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTCCSCEEEEEESSCGGGTHHHHHHHTCSEEEECGGGC
T ss_pred hhHHHHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEECcccC
Confidence 4677788888 999999999864322 111134556666655 33577888887 7888999999998654433
Q ss_pred --CCHHHHHhhcCCCcEEEEecC--CHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-----CCCEE
Q 010240 389 --MPARTARALLGPDKIIGVSCK--TPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-----KLPVV 459 (514)
Q Consensus 389 --~~~~~~~~~~~~~~~ig~s~~--~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-----~~pv~ 459 (514)
.....++.....+..+|++.+ |+.|..+....++|+|.+..+.|....+...+..++.++++++.. ++++.
T Consensus 92 ~~~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~l~~~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~ 171 (231)
T 3ctl_A 92 NGQAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIE 171 (231)
T ss_dssp TTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEE
T ss_pred CccHHHHHHHHHHcCCeEEEEEECCCcHHHHHHHHhcCCEEEEeeeccCcCCccccHHHHHHHHHHHHHHhccCCCceEE
Confidence 233445555567888888875 666666666668999999888887665555555678788777654 68999
Q ss_pred EECCCCcccHHHHHHCCCCCCceEEEe-ecccCCCC-HHHHHHHHHHHHHH
Q 010240 460 AIGGIGISNASDVMKIGVSNLKGVAVV-SALFDREC-ILPESKKLHAVLMD 508 (514)
Q Consensus 460 a~GGi~~~~~~~~~~~Ga~~~~gva~~-~~i~~~~~-~~~~~~~~~~~~~~ 508 (514)
+.|||+++|+.++.++||+ .+.+| |+|++++| |.+.+++|++.+++
T Consensus 172 VdGGI~~~~~~~~~~aGAd---~~V~G~saif~~~d~~~~~~~~l~~~~~~ 219 (231)
T 3ctl_A 172 VDGSCNQATYEKLMAAGAD---VFIVGTSGLFNHAENIDEAWRIMTAQILA 219 (231)
T ss_dssp EESCCSTTTHHHHHHHTCC---EEEECTTTTGGGCSSHHHHHHHHHHHHHC
T ss_pred EECCcCHHHHHHHHHcCCC---EEEEccHHHhCCCCcHHHHHHHHHHHHHH
Confidence 9999999999999999999 99999 99999888 99999999987764
No 97
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=99.56 E-value=3e-14 Score=141.13 Aligned_cols=149 Identities=19% Similarity=0.214 Sum_probs=112.1
Q ss_pred cCEEEEccc-----CCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCC--hhHHHHHHHhhcccceEEcCCHHHHHH
Q 010240 90 VDVVKTGML-----PSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAG--PSTITGLRENLLPMADIVTPNVKEASA 162 (514)
Q Consensus 90 ~~~i~~G~~-----~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~--~~~~~~l~~~ll~~~diitpN~~E~~~ 162 (514)
++.+.++.. .+.+.+..+++.+++ + .++++||+.+. .++. .+......+++++.+|+++||..|++.
T Consensus 125 ~~~~~~~g~~~~~~~~~~~~~~~~~~a~~-~-~~v~~Dp~~~~----~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~ 198 (313)
T 3ewm_A 125 AKIVNFGSVILARNPSRETVMKVIKKIKG-S-SLIAFDVNLRL----DLWRGQEEEMIKVLEESIKLADIVKASEEEVLY 198 (313)
T ss_dssp CSEEEEESGGGGSTTHHHHHHHHHHHHBT-T-BEEEEECCCCG----GGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHH
T ss_pred CCEEEEcCcccCCcchHHHHHHHHHHhcc-C-CEEEEeCCCCh----HHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHH
Confidence 566655432 234566677777763 4 45999996543 2222 222333445788999999999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHHH
Q 010240 163 LLGGMQVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELA 242 (514)
Q Consensus 163 L~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~ 242 (514)
|++ .... ..+...|++|.|..| .+++++++.++++.++++++|++||||+|+|+|++.|+
T Consensus 199 l~~-~~~~-------------~~~~~~vviT~G~~G------~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~l~ 258 (313)
T 3ewm_A 199 LEN-QGVE-------------VKGSMLTAITLGPKG------CRLIKNETVVDVPSYNVNPLDTTGAGDAFMAALLVGIL 258 (313)
T ss_dssp HHT-TTCC-------------CCCSSEEEEECGGGE------EEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHH
T ss_pred Hhc-cCcc-------------ccCceEEEEEECCCC------eEEEECCeeEEcCCCCcccCCCCCchHHHHHHHHHHHH
Confidence 987 2211 123556899999987 78888888888999888899999999999999999999
Q ss_pred --cCCCHHHHHHHHHHHHHHHHhc
Q 010240 243 --KGSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 243 --~g~~l~~A~~~A~~~~~~~i~~ 264 (514)
+|+++++|+++|++++..+++.
T Consensus 259 ~~~g~~l~~a~~~A~~~aa~~v~~ 282 (313)
T 3ewm_A 259 KLKGLDLLKLGKFANLVAALSTQK 282 (313)
T ss_dssp HSSSCCHHHHHHHHHHHHHHHTTS
T ss_pred hcCCCCHHHHHHHHHHHHHHHHcc
Confidence 9999999999999997777664
No 98
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=99.56 E-value=1.3e-14 Score=143.69 Aligned_cols=149 Identities=13% Similarity=0.064 Sum_probs=111.9
Q ss_pred CcCEEEEcccCCHHHHHHHHHHHhcCC-------CCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHH
Q 010240 89 QVDVVKTGMLPSTDLVKVLLQSLSEFP-------VRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEAS 161 (514)
Q Consensus 89 ~~~~i~~G~~~~~~~~~~~~~~~~~~~-------~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~ 161 (514)
+++.+.++.. .++....+++.+++.+ ..++++||... . +.+ +++++++|+++||..|++
T Consensus 146 ~~~~v~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~--------~----~~~-~~~l~~~dil~~n~~ea~ 211 (312)
T 2hlz_A 146 QFKWIHIEGR-NASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKP--------R----EEL-FQLFGYGDVVFVSKDVAK 211 (312)
T ss_dssp GEEEEEEECS-SHHHHHHHHHHHHHHHTTSCGGGCCEEEEEECSC--------C----GGG-GGGGGSSSEEEECHHHHH
T ss_pred cCCEEEEecc-CHHHHHHHHHHHHHhcccccCCCCeEEEEEcccc--------h----HHH-HHHHhcCCEEEEcHHHHH
Confidence 5778887765 4566667777777652 22488997211 1 122 368899999999999999
Q ss_pred HhhCCCCCCCHHHHHHHHHHHHhcCC--CeEEEecccCCCCCCceEEEEeC-CeEEEEeec-ccCCCCCCCCcchHHHHH
Q 010240 162 ALLGGMQVVTVADMCSAAKLLHNLGP--RTVLVKGGDLPDSSDAVDIFFDG-EDFHELRSS-RVNTRNTHGTGCTLASCI 237 (514)
Q Consensus 162 ~L~g~~~~~~~~~~~~~a~~l~~~g~--~~Vvvt~g~~g~~~~~~~~~~~~-~~~~~~~~~-~~~~~d~~GaGD~f~a~i 237 (514)
.| | . . +..++++.+.+.+. +.|++|.|..| .++++. ++.++++.. .++++||+||||+|+|+|
T Consensus 212 ~l-g-~--~---~~~~~~~~l~~~~~~g~~vvvt~G~~G------~~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~a~~ 278 (312)
T 2hlz_A 212 HL-G-F--Q---SAEEALRGLYGRVRKGAVLVCAWAEEG------ADALGPDGKLLHSDAFPPPRVVDTLGAGDTFNASV 278 (312)
T ss_dssp HT-T-C--C---SHHHHHHHHGGGSCTTCEEEEECGGGC------EEEECTTCCEEEECCCCCSSCCCCTTHHHHHHHHH
T ss_pred Hc-C-C--C---CHHHHHHHHHHhcCCCCEEEEEecccC------eEEEccCCCEEECCCCCCCCcccCCCchHHHHHHH
Confidence 87 5 2 1 34456667766543 79999999987 777764 446677774 457889999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHhc
Q 010240 238 AAELAKGSPMLSAVKVAKCFVETALDY 264 (514)
Q Consensus 238 ~~~l~~g~~l~~A~~~A~~~~~~~i~~ 264 (514)
++.|++|+++++|+++|++++..+++.
T Consensus 279 ~~~l~~g~~~~~a~~~a~~~aa~~v~~ 305 (312)
T 2hlz_A 279 IFSLSQGRSVQEALRFGCQVAGKKCGL 305 (312)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999998877765
No 99
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.55 E-value=6.9e-14 Score=134.16 Aligned_cols=180 Identities=15% Similarity=0.144 Sum_probs=136.9
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEc------CcHHHHHhCCCCeEEeCCCCCC-
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLIN------DRIDIALACDADGVHLGQSDMP- 390 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~------~~~~~a~~~ga~gvhl~~~~~~- 390 (514)
.+..+.++.+.++|++.++++..+............++++++..+++++++ ++++.+.+.|||+||++...+.
T Consensus 30 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~~ 109 (253)
T 1thf_D 30 GDPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTAAVEN 109 (253)
T ss_dssp TCHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHC
T ss_pred cCHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHHhC
Confidence 467788888899999999999887553333344555667777788999987 5677888999999999885422
Q ss_pred ---HHHHHhhcCCC-cEEEEecC-------------------CH-HHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHH
Q 010240 391 ---ARTARALLGPD-KIIGVSCK-------------------TP-EEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDG 446 (514)
Q Consensus 391 ---~~~~~~~~~~~-~~ig~s~~-------------------~~-~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~ 446 (514)
.....+.++.. ..++++++ ++ +.+..+.+.|++.+++..+.+..+. ....++.
T Consensus 110 p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~---~g~~~~~ 186 (253)
T 1thf_D 110 PSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTK---SGYDTEM 186 (253)
T ss_dssp THHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTSC---SCCCHHH
T ss_pred hHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHHCCCCEEEEEeccCCCCC---CCCCHHH
Confidence 33344444433 35888885 34 5578899999999988655443222 2346899
Q ss_pred HHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccCCC-CHHHHHHHHH
Q 010240 447 LKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFDRE-CILPESKKLH 503 (514)
Q Consensus 447 l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~~-~~~~~~~~~~ 503 (514)
++++++..++||+|.|||+ ++++.+++++|++ |+.+|++|+..+ ++.+..+.++
T Consensus 187 ~~~l~~~~~ipvia~GGI~~~~d~~~~~~~Gad---gv~vGsal~~~~~~~~~~~~~l~ 242 (253)
T 1thf_D 187 IRFVRPLTTLPIIASGGAGKMEHFLEAFLAGAD---AALAASVFHFREIDVRELKEYLK 242 (253)
T ss_dssp HHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCS---EEEESHHHHTTCSCHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCh---HHHHHHHHHcCCCCHHHHHHHHH
Confidence 9999988899999999999 5999999999999 999999999877 7777666554
No 100
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=99.55 E-value=6.8e-14 Score=146.81 Aligned_cols=163 Identities=19% Similarity=0.232 Sum_probs=118.8
Q ss_pred CcCEEEEcccCCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcc--cceEEcCCHHHHHHhhCC
Q 010240 89 QVDVVKTGMLPSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLP--MADIVTPNVKEASALLGG 166 (514)
Q Consensus 89 ~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~--~~diitpN~~E~~~L~g~ 166 (514)
++-+|.+|++.+.+.+..+.+.+++.+.+ +|+|||+....+ ......+++++ ..+|||||..|+++|+|.
T Consensus 308 ~alvin~G~l~~~~~~~~a~~~a~~~~~P-vVlDPVg~~a~~-------~r~~~~~~Ll~~~~~~vItpN~~E~~~L~g~ 379 (540)
T 3nl6_A 308 ATLLLNTGSVAPPEMLKAAIRAYNDVKRP-IVFDPVGYSATE-------TRLLLNNKLLTFGQFSCIKGNSSEILGLAEL 379 (540)
T ss_dssp CEEEEESSCSCCHHHHHHHHHHHHTTTCC-EEEECTTCTTSH-------HHHHHHHHHTTSCCCSEEEECHHHHHHHTTC
T ss_pred CeEEEeCCCCCHHHHHHHHHHHHHHcCCC-EEEChHHhhccc-------ccHHHHHHHHhhCCCeEECCCHHHHHHHhCC
Confidence 44455567776667777777778777765 999999864321 11223335666 789999999999999983
Q ss_pred CC-----CC-----CHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeC-------------------CeEEEEe
Q 010240 167 MQ-----VV-----TVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDG-------------------EDFHELR 217 (514)
Q Consensus 167 ~~-----~~-----~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~-------------------~~~~~~~ 217 (514)
.. .+ +.++..+++++|.+++...|++||.. ++++++ +..+.++
T Consensus 380 ~~~~~~GVds~~~~~~~d~~~aA~~lA~~~~~vVvlkG~~--------D~I~dg~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (540)
T 3nl6_A 380 NKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCTGEF--------DFIADGTIEGKYSLSKGTNGTSVEDIPCVAVE 451 (540)
T ss_dssp --------------CCHHHHHHHHHHHHHTTSEEEECSSS--------EEEEECCGGGBCCSSSCCSSCCTTSSCEEEEE
T ss_pred CcccccccccccccCHHHHHHHHHHHHHHhCCEEEEcCCC--------eEEECCCccccccccccccccccCCccEEEEC
Confidence 21 01 12677889999998888899999977 888887 4455555
Q ss_pred ecccCCCC-CCCCcchHHHHHHHHHHcCC---CHHHHHHHHHHHHHHHHhcccc
Q 010240 218 SSRVNTRN-THGTGCTLASCIAAELAKGS---PMLSAVKVAKCFVETALDYSKD 267 (514)
Q Consensus 218 ~~~~~~~d-~~GaGD~f~a~i~~~l~~g~---~l~~A~~~A~~~~~~~i~~~~~ 267 (514)
...++.+. ++|+||+|+|.++++++++. ++.+|+..|+.+...+-+.+.+
T Consensus 452 ~G~~~~m~~vtGtGc~Lsg~Iaa~la~~~~~~~~~~Aa~~a~~~~~~Ag~~A~~ 505 (540)
T 3nl6_A 452 AGPIEIMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASE 505 (540)
T ss_dssp CSCCGGGGSSTTHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChhhccCccCchHHHHHHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 43325454 69999999999999999998 6999999998887777666544
No 101
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=99.54 E-value=3.5e-15 Score=146.95 Aligned_cols=185 Identities=19% Similarity=0.238 Sum_probs=131.6
Q ss_pred HHHHHHHHhCCCCEE-EEE-----cCCCCHHHHHHHHHHHHHHHhhcCceEEEcCc------HHHHHhCCCCeEEeCCCC
Q 010240 321 TDAVKAALEGGATII-QLR-----EKDADTRGFLEAAKACLQICCVHGVPLLINDR------IDIALACDADGVHLGQSD 388 (514)
Q Consensus 321 ~~~~~~~~~~Gv~~v-~lr-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~------~~~a~~~ga~gvhl~~~~ 388 (514)
.+.++.+.++|++.| +++ .+...........+.+.++++..++++++.++ .+.+.++|||+|+ ....
T Consensus 31 ~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~~iPv~~k~r~g~~~~~~~~~a~GAd~V~-~~~~ 109 (305)
T 2nv1_A 31 AEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGHIVEARVLEAMGVDYID-ESEV 109 (305)
T ss_dssp HHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHCSSCEEEEECTTCHHHHHHHHHHTCSEEE-ECTT
T ss_pred HHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhCCCCEEecccccchHHHHHHHHCCCCEEE-Eecc
Confidence 357788889999999 664 11000000000112334445567888887543 3788899999998 3332
Q ss_pred CCHHHHHhh---cCCCcEEEEecCCHHHHHHhhhCCCcEEEe------ccccCCCCC----------------CCC----
Q 010240 389 MPARTARAL---LGPDKIIGVSCKTPEEAHQAWIDGANYIGC------GGVYPTNTK----------------ANN---- 439 (514)
Q Consensus 389 ~~~~~~~~~---~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~------~~vf~t~~k----------------~~~---- 439 (514)
.+....++. ...+..+++++++++|+.++.+.|+|||.+ |++|++..+ .+.
T Consensus 110 l~~~~~~~~i~~~~~g~~v~~~~~~~~e~~~a~~~Gad~V~~~G~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~~~~~~~ 189 (305)
T 2nv1_A 110 LTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEA 189 (305)
T ss_dssp SCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHH
T ss_pred CCHHHHHHHHHHhccCCcEEEEeCCHHHHHHHHHCCCCEEEeccccCccchHHHHhhhhhhhccchhhccccchhhhccc
Confidence 222222211 123677888999999999999999999998 566654211 111
Q ss_pred --ccCCHHHHHHHHHcCCCCEE--EECCC-CcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 440 --LTVGLDGLKTVCLASKLPVV--AIGGI-GISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 440 --~~~g~~~l~~~~~~~~~pv~--a~GGi-~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
.+.+++.++++++..++||+ +.||| +++++.+++++||+ ||++|++|+.++||...+++|++.+.+.
T Consensus 190 ~~~~~~~~~i~~i~~~~~iPvi~~a~GGI~~~~d~~~~~~~Gad---gV~vGsai~~~~~p~~~~~~l~~~~~~~ 261 (305)
T 2nv1_A 190 KNLGAPYELLLQIKKDGKLPVVNFAAGGVATPADAALMMQLGAD---GVFVGSGIFKSDNPAKFAKAIVEATTHF 261 (305)
T ss_dssp HHHTCCHHHHHHHHHHTSCSSCEEBCSCCCSHHHHHHHHHTTCS---CEEECGGGGGSSCHHHHHHHHHHHHHTT
T ss_pred ccccccHHHHHHHHHhcCCCEEEEeccCCCCHHHHHHHHHcCCC---EEEEcHHHHcCCCHHHHHHHHHHHHHHh
Confidence 34578999999887889998 99999 89999999999999 9999999999999999999999888754
No 102
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=99.52 E-value=1.2e-13 Score=130.89 Aligned_cols=167 Identities=20% Similarity=0.312 Sum_probs=126.2
Q ss_pred CHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEE-------------Ec---CcHHHHHhCCCCeE
Q 010240 319 SITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLL-------------IN---DRIDIALACDADGV 382 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------------v~---~~~~~a~~~ga~gv 382 (514)
+..+.++++.++|+.+++++ ++. .++.++ +..+.+++ ++ ++++.+.+.|++.|
T Consensus 37 ~~~~~a~~~~~~G~~~i~~~----~~~----~i~~i~---~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V 105 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRAN----SVR----DIKEIQ---AITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVI 105 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEEE----SHH----HHHHHH---TTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEE
T ss_pred hHHHHHHHHHHCCCcEeecC----CHH----HHHHHH---HhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCEE
Confidence 78889999999999999986 222 223333 23355553 32 24667889999999
Q ss_pred EeCCCCC------C----HHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEE--EeccccCCCCCCCCccCCHHHHHHH
Q 010240 383 HLGQSDM------P----ARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYI--GCGGVYPTNTKANNLTVGLDGLKTV 450 (514)
Q Consensus 383 hl~~~~~------~----~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v--~~~~vf~t~~k~~~~~~g~~~l~~~ 450 (514)
|+..... . ...+++.. ++..++.+++|++|+..+.+.|+||| .++.+.+ .++ .....+++.++++
T Consensus 106 ~l~~~~~~~~~~~~~~~~i~~i~~~~-~~~~v~~~~~t~~ea~~a~~~Gad~i~~~v~g~~~-~~~-~~~~~~~~~i~~~ 182 (234)
T 1yxy_A 106 AMDCTKRDRHDGLDIASFIRQVKEKY-PNQLLMADISTFDEGLVAHQAGIDFVGTTLSGYTP-YSR-QEAGPDVALIEAL 182 (234)
T ss_dssp EEECCSSCCTTCCCHHHHHHHHHHHC-TTCEEEEECSSHHHHHHHHHTTCSEEECTTTTSST-TSC-CSSSCCHHHHHHH
T ss_pred EEcccccCCCCCccHHHHHHHHHHhC-CCCeEEEeCCCHHHHHHHHHcCCCEEeeeccccCC-CCc-CCCCCCHHHHHHH
Confidence 9865421 1 23344443 47889999999999999999999999 5666554 222 2234578999999
Q ss_pred HHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHH
Q 010240 451 CLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVL 506 (514)
Q Consensus 451 ~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~ 506 (514)
++. ++||++.|||+ ++|+.+++++||+ +|++||+|+. |...+++|++.+
T Consensus 183 ~~~-~ipvia~GGI~s~~~~~~~~~~Gad---~v~vGsal~~---p~~~~~~l~~~~ 232 (234)
T 1yxy_A 183 CKA-GIAVIAEGKIHSPEEAKKINDLGVA---GIVVGGAITR---PKEIAERFIEAL 232 (234)
T ss_dssp HHT-TCCEEEESCCCSHHHHHHHHTTCCS---EEEECHHHHC---HHHHHHHHHHHT
T ss_pred HhC-CCCEEEECCCCCHHHHHHHHHCCCC---EEEEchHHhC---hHHHHHHHHHHH
Confidence 988 99999999998 9999999999999 9999999996 888888887765
No 103
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.51 E-value=6.1e-13 Score=125.00 Aligned_cols=172 Identities=17% Similarity=0.159 Sum_probs=127.7
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEE-------------EcC---cHHHHHhCCCCe
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLL-------------IND---RIDIALACDADG 381 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------------v~~---~~~~a~~~ga~g 381 (514)
....+...++.++|+..+... +.+ . ++++.+..+.+++ +.. +++.+.+.|+|.
T Consensus 36 ~~~~~~A~a~~~~Ga~~i~~~----~~~----~---i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~ 104 (232)
T 3igs_A 36 EIVAAMALAAEQAGAVAVRIE----GID----N---LRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAI 104 (232)
T ss_dssp HHHHHHHHHHHHTTCSEEEEE----SHH----H---HHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSE
T ss_pred chHHHHHHHHHHCCCeEEEEC----CHH----H---HHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCE
Confidence 356777788889999988762 222 2 2333334455543 222 356788999999
Q ss_pred EEeCCCC-----CCHHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccc-cCCCCCCCCccCCHHHHHHHHHcCC
Q 010240 382 VHLGQSD-----MPARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGV-YPTNTKANNLTVGLDGLKTVCLASK 455 (514)
Q Consensus 382 vhl~~~~-----~~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~v-f~t~~k~~~~~~g~~~l~~~~~~~~ 455 (514)
|.+.... ......+.....+..+++++||.+|+.++.+.|+|||+++.. +.+.++. ...+++.++++++. +
T Consensus 105 V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~--~~~~~~~i~~l~~~-~ 181 (232)
T 3igs_A 105 IAVDGTARQRPVAVEALLARIHHHHLLTMADCSSVDDGLACQRLGADIIGTTMSGYTTPDTP--EEPDLPLVKALHDA-G 181 (232)
T ss_dssp EEEECCSSCCSSCHHHHHHHHHHTTCEEEEECCSHHHHHHHHHTTCSEEECTTTTSSSSSCC--SSCCHHHHHHHHHT-T
T ss_pred EEECccccCCHHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHhCCCCEEEEcCccCCCCCCC--CCCCHHHHHHHHhc-C
Confidence 9876542 112233444445889999999999999999999999987544 3333332 33588999999987 9
Q ss_pred CCEEEECCC-CcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 456 LPVVAIGGI-GISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 456 ~pv~a~GGi-~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
+||+|.||| +++++.+++++|++ ||.+|++|+ +|...+++|.+.+++.
T Consensus 182 ipvIA~GGI~t~~d~~~~~~~Gad---gV~VGsal~---~p~~~~~~~~~~i~~~ 230 (232)
T 3igs_A 182 CRVIAEGRYNSPALAAEAIRYGAW---AVTVGSAIT---RLEHICGWYNDALKKA 230 (232)
T ss_dssp CCEEEESCCCSHHHHHHHHHTTCS---EEEECHHHH---CHHHHHHHHHHHHHHH
T ss_pred CcEEEECCCCCHHHHHHHHHcCCC---EEEEehHhc---CHHHHHHHHHHHHHHh
Confidence 999999999 59999999999999 999999999 5888899998888753
No 104
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.50 E-value=5.9e-14 Score=142.00 Aligned_cols=162 Identities=20% Similarity=0.166 Sum_probs=128.1
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEE---------cCcHHHHHhCCCCeEEeCCCCCCHHHHHhhcCCC
Q 010240 331 GATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLI---------NDRIDIALACDADGVHLGQSDMPARTARALLGPD 401 (514)
Q Consensus 331 Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v---------~~~~~~a~~~ga~gvhl~~~~~~~~~~~~~~~~~ 401 (514)
|+.+++.+.+..+..++.++++.+.++|+++++++.. ++.++.+.+.|++.|++.........++.....+
T Consensus 66 gVnl~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~g~~~~~~i~~~~~~g 145 (369)
T 3bw2_A 66 GVNVFMPQPELAESGAVEVYAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVPVVSFHFGVPDREVIARLRRAG 145 (369)
T ss_dssp EEEEECCCCCC---CHHHHHHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCSEEEEESSCCCHHHHHHHHHTT
T ss_pred EEEEecCCCCcccHHHHHHHHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCCEEEEeCCCCcHHHHHHHHHCC
Confidence 6777877888778888889999999999999998742 3457888999999998877665555666555567
Q ss_pred cEEEEecCCHHHHHHhhhCCCcEEEe-ccccC--CCCC-CCCcc----CC-HHHHHHHHHcCCCCEEEECCC-CcccHHH
Q 010240 402 KIIGVSCKTPEEAHQAWIDGANYIGC-GGVYP--TNTK-ANNLT----VG-LDGLKTVCLASKLPVVAIGGI-GISNASD 471 (514)
Q Consensus 402 ~~ig~s~~~~~e~~~a~~~g~d~v~~-~~vf~--t~~k-~~~~~----~g-~~~l~~~~~~~~~pv~a~GGi-~~~~~~~ 471 (514)
..++.+++|+++++.+.+.|+|||.+ |+.+- +.+. +...+ .+ ++.++++++..++||++.||| +++++.+
T Consensus 146 ~~v~~~v~t~~~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaaGGI~~~~~~~~ 225 (369)
T 3bw2_A 146 TLTLVTATTPEEARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVAAGGIMRGGQIAA 225 (369)
T ss_dssp CEEEEEESSHHHHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEESSCCSHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEEECCCCCHHHHHH
Confidence 88999999999999999999999999 65431 1111 11111 45 889999988889999999999 8999999
Q ss_pred HHHCCCCCCceEEEeecccCCCCH
Q 010240 472 VMKIGVSNLKGVAVVSALFDRECI 495 (514)
Q Consensus 472 ~~~~Ga~~~~gva~~~~i~~~~~~ 495 (514)
++++||+ +|.+||+|+..+++
T Consensus 226 ~l~~GAd---~V~vGs~~~~~~e~ 246 (369)
T 3bw2_A 226 VLAAGAD---AAQLGTAFLATDES 246 (369)
T ss_dssp HHHTTCS---EEEESHHHHTSTTC
T ss_pred HHHcCCC---EEEEChHHhCCccc
Confidence 9999999 99999999977664
No 105
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.50 E-value=7.1e-13 Score=124.22 Aligned_cols=170 Identities=18% Similarity=0.165 Sum_probs=124.9
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEE-------------EcC---cHHHHHhCCCCe
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLL-------------IND---RIDIALACDADG 381 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------------v~~---~~~~a~~~ga~g 381 (514)
....+...++.++|+..+... +.++ ++++.+..+.+++ +.. +++.+.+.|+|.
T Consensus 36 ~~~~~~A~a~~~~Ga~~i~~~----~~~~-------i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~ 104 (229)
T 3q58_A 36 EIVAAMAQAAASAGAVAVRIE----GIEN-------LRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADI 104 (229)
T ss_dssp HHHHHHHHHHHHTTCSEEEEE----SHHH-------HHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSE
T ss_pred chHHHHHHHHHHCCCcEEEEC----CHHH-------HHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCE
Confidence 356777788889999998762 2222 3333334455553 222 356788999999
Q ss_pred EEeCCCC-----CCHHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccc-cCCCCCCCCccCCHHHHHHHHHcCC
Q 010240 382 VHLGQSD-----MPARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGV-YPTNTKANNLTVGLDGLKTVCLASK 455 (514)
Q Consensus 382 vhl~~~~-----~~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~v-f~t~~k~~~~~~g~~~l~~~~~~~~ 455 (514)
|.+.... ......+.....+..++++|||.+|++++.+.|+|||+++.. +.+.++. ...+++.++++++. +
T Consensus 105 I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~--~~~~~~li~~l~~~-~ 181 (229)
T 3q58_A 105 IAFDASFRSRPVDIDSLLTRIRLHGLLAMADCSTVNEGISCHQKGIEFIGTTLSGYTGPITP--VEPDLAMVTQLSHA-G 181 (229)
T ss_dssp EEEECCSSCCSSCHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCSEEECTTTTSSSSCCC--SSCCHHHHHHHHTT-T
T ss_pred EEECccccCChHHHHHHHHHHHHCCCEEEEecCCHHHHHHHHhCCCCEEEecCccCCCCCcC--CCCCHHHHHHHHHc-C
Confidence 9875532 112334444445889999999999999999999999987544 3233332 23478999999987 9
Q ss_pred CCEEEECCC-CcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHH
Q 010240 456 LPVVAIGGI-GISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLM 507 (514)
Q Consensus 456 ~pv~a~GGi-~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~ 507 (514)
+||+|.||| +++++.+++++||+ ||.+|++|+ +|...+++|.+.++
T Consensus 182 ipvIA~GGI~t~~d~~~~~~~Gad---gV~VGsai~---~p~~~~~~f~~~~~ 228 (229)
T 3q58_A 182 CRVIAEGRYNTPALAANAIEHGAW---AVTVGSAIT---RIEHICQWFSHAVK 228 (229)
T ss_dssp CCEEEESSCCSHHHHHHHHHTTCS---EEEECHHHH---CHHHHHHHHHHHHC
T ss_pred CCEEEECCCCCHHHHHHHHHcCCC---EEEEchHhc---ChHHHHHHHHHHHh
Confidence 999999999 59999999999999 999999999 47778888877653
No 106
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.48 E-value=5e-14 Score=134.38 Aligned_cols=170 Identities=23% Similarity=0.278 Sum_probs=124.1
Q ss_pred CHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEc------CcHHHHHhCCCCeEEeCCCCCC--
Q 010240 319 SITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLIN------DRIDIALACDADGVHLGQSDMP-- 390 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~------~~~~~a~~~ga~gvhl~~~~~~-- 390 (514)
+..+.++.+.++|+++++++..+......... ..++.+++..+++++++ ++++.+.+.|||+||++...+.
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l~~p 111 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAMDIKVELSGGIRDDDTLAAALATGCTRVNLGTAALETP 111 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHCH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHhcCCcEEEECCcCCHHHHHHHHHcCCCEEEECchHhhCH
Confidence 46677888889999999998743211111112 34556667788999986 4677788999999999885432
Q ss_pred --HHHHHhhcCCCcEEEEecC--------------CHHH-HHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHc
Q 010240 391 --ARTARALLGPDKIIGVSCK--------------TPEE-AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLA 453 (514)
Q Consensus 391 --~~~~~~~~~~~~~ig~s~~--------------~~~e-~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~ 453 (514)
.....+.++....++++++ ++.| +..+.+.|+|+|++..+.+..+ ....+++.++++++.
T Consensus 112 ~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~---~~g~~~~~~~~i~~~ 188 (244)
T 1vzw_A 112 EWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCARYVVTDIAKDGT---LQGPNLELLKNVCAA 188 (244)
T ss_dssp HHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCCCEEEEEC----------CCCHHHHHHHHHT
T ss_pred HHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCCCEEEEeccCcccc---cCCCCHHHHHHHHHh
Confidence 2333334444567788887 6555 6888999999998876654322 123579999999988
Q ss_pred CCCCEEEECCCC-cccHHHHHHC---CCCCCceEEEeecccCCCCH
Q 010240 454 SKLPVVAIGGIG-ISNASDVMKI---GVSNLKGVAVVSALFDRECI 495 (514)
Q Consensus 454 ~~~pv~a~GGi~-~~~~~~~~~~---Ga~~~~gva~~~~i~~~~~~ 495 (514)
.++||+|.|||+ ++++.+++++ |++ ||++|++|+..+..
T Consensus 189 ~~ipvia~GGI~~~~d~~~~~~~~~~Gad---gv~vG~al~~~~~~ 231 (244)
T 1vzw_A 189 TDRPVVASGGVSSLDDLRAIAGLVPAGVE---GAIVGKALYAKAFT 231 (244)
T ss_dssp CSSCEEEESCCCSHHHHHHHHTTGGGTEE---EEEECHHHHTTSSC
T ss_pred cCCCEEEECCCCCHHHHHHHHhhccCCCc---eeeeeHHHHcCCCC
Confidence 899999999999 4999999999 999 99999999977633
No 107
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=99.47 E-value=7.9e-13 Score=127.31 Aligned_cols=182 Identities=14% Similarity=0.107 Sum_probs=125.7
Q ss_pred CceEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCC---------------------CHHHHHHHHHHHHHHHh
Q 010240 301 DLFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDA---------------------DTRGFLEAAKACLQICC 359 (514)
Q Consensus 301 ~~~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~---------------------~~~~~~~~~~~~~~~~~ 359 (514)
.+..|+++..+.. +...+.++++.++|+++||+..+-. +..+..+.+++++ +
T Consensus 19 ~~~~~i~~g~~~~----~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir---~ 91 (262)
T 1rd5_A 19 AFIPYITAGDPDL----ATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVT---P 91 (262)
T ss_dssp EEEEEEETTSSCH----HHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHG---G
T ss_pred eEEEEeeCCCCCH----HHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHH---h
Confidence 3567777655422 4677888899999999999986433 3444444444444 3
Q ss_pred hcCceEEEcCcHH--------HHHhCCCCeEEeCCCCCC-HHHH-H--hhcCCCcEEEEecCC-HHHHHHhhhCCCcEEE
Q 010240 360 VHGVPLLINDRID--------IALACDADGVHLGQSDMP-ARTA-R--ALLGPDKIIGVSCKT-PEEAHQAWIDGANYIG 426 (514)
Q Consensus 360 ~~~~~l~v~~~~~--------~a~~~ga~gvhl~~~~~~-~~~~-~--~~~~~~~~ig~s~~~-~~e~~~a~~~g~d~v~ 426 (514)
..+++++++.+++ .+.++|++|+|++..... .... . +..+...++..+.++ .+.+....+.+.+|+.
T Consensus 92 ~~~~Pv~~m~~~~~~~~~~~~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~~~~g~v~ 171 (262)
T 1rd5_A 92 ELSCPVVLLSYYKPIMFRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVY 171 (262)
T ss_dssp GCSSCEEEECCSHHHHSCCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHHHCCSCEE
T ss_pred cCCCCEEEEecCcHHHHHHHHHHHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHhcCCCeEE
Confidence 4678888765333 388999999999754322 1111 1 122334566677766 4445555666677887
Q ss_pred eccccC-CCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccCC
Q 010240 427 CGGVYP-TNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFDR 492 (514)
Q Consensus 427 ~~~vf~-t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~ 492 (514)
+++++. |.++.+.++...+.++++++..++||++.|||+ ++|+.+++++||+ +|.+||+|++.
T Consensus 172 ~~s~~G~tG~~~~~~~~~~~~i~~v~~~~~~pI~vgGGI~~~e~~~~~~~~GAd---gvvVGSai~~~ 236 (262)
T 1rd5_A 172 LVSVNGVTGPRANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWGAD---GVIIGSAMVRQ 236 (262)
T ss_dssp EECSSCCBCTTSCBCTHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCS---EEEECHHHHHH
T ss_pred EecCCCCCCCCcCCCchHHHHHHHHHhhcCCeEEEECCcCCHHHHHHHHHcCCC---EEEEChHHHhH
Confidence 777654 334444444456788999888899999999999 9999999999999 99999999853
No 108
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=99.47 E-value=4.6e-13 Score=128.18 Aligned_cols=173 Identities=17% Similarity=0.222 Sum_probs=127.4
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcC------cHHHHHhCCCCeEEeCCCCC--
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLIND------RIDIALACDADGVHLGQSDM-- 389 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~------~~~~a~~~ga~gvhl~~~~~-- 389 (514)
++..+.++.+.++|++.++++...............+..+++..++++++++ +++.+.+.|||+||++....
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~~~~ 112 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAVRN 112 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHC
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEEChHHhhC
Confidence 4677888899999999999997765322222223445556667788999875 56677889999999986432
Q ss_pred C--HHHHHhhcCCC-cEEEEecC-------------------C-HHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHH
Q 010240 390 P--ARTARALLGPD-KIIGVSCK-------------------T-PEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDG 446 (514)
Q Consensus 390 ~--~~~~~~~~~~~-~~ig~s~~-------------------~-~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~ 446 (514)
+ .....+.++.. ..++.+++ + .+.++.+.+.|+|+|.+.++.++.++.+ .+++.
T Consensus 113 ~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~~g~~~~---~~~~~ 189 (253)
T 1h5y_A 113 PQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDRDGTGLG---YDVEL 189 (253)
T ss_dssp THHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTTCSC---CCHHH
T ss_pred cHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccCCCCcCc---CCHHH
Confidence 1 22233333322 34666653 3 3557888899999999988877655433 37899
Q ss_pred HHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccCCCCHH
Q 010240 447 LKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFDRECIL 496 (514)
Q Consensus 447 l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~ 496 (514)
++++++..++||++.|||+ ++++.+++++|++ |+.+||+|+..+++.
T Consensus 190 i~~l~~~~~~pvia~GGi~~~~~~~~~~~~Ga~---~v~vgsal~~~~~~~ 237 (253)
T 1h5y_A 190 IRRVADSVRIPVIASGGAGRVEHFYEAAAAGAD---AVLAASLFHFRVLSI 237 (253)
T ss_dssp HHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCS---EEEESHHHHTTSSCH
T ss_pred HHHHHHhcCCCEEEeCCCCCHHHHHHHHHcCCc---HHHHHHHHHcCCCCH
Confidence 9999988899999999998 5999999999999 999999999876443
No 109
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=99.47 E-value=2.6e-12 Score=122.51 Aligned_cols=172 Identities=15% Similarity=0.119 Sum_probs=132.5
Q ss_pred CHHHHHHHHHhCCCCEEEEE-cC---CCCHHHHHHHHHHHHHHHhhcCceEEEcC------cHHHHHhCCCCeEEeCCCC
Q 010240 319 SITDAVKAALEGGATIIQLR-EK---DADTRGFLEAAKACLQICCVHGVPLLIND------RIDIALACDADGVHLGQSD 388 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr-~~---~~~~~~~~~~~~~~~~~~~~~~~~l~v~~------~~~~a~~~ga~gvhl~~~~ 388 (514)
+..+......++|++++.+- +. ..+.+. +..+.+..+++++..+ ++..+..+|||+|+|....
T Consensus 80 dp~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~-------L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~ 152 (272)
T 3tsm_A 80 DPPALAKAYEEGGAACLSVLTDTPSFQGAPEF-------LTAARQACSLPALRKDFLFDPYQVYEARSWGADCILIIMAS 152 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSTTTCCCHHH-------HHHHHHTSSSCEEEESCCCSTHHHHHHHHTTCSEEEEETTT
T ss_pred CHHHHHHHHHHCCCCEEEEeccccccCCCHHH-------HHHHHHhcCCCEEECCccCCHHHHHHHHHcCCCEEEEcccc
Confidence 45677888888999999873 22 123332 2233345678887666 4677899999999999888
Q ss_pred CCHHHHHh----hcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC--CCCEEEEC
Q 010240 389 MPARTARA----LLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS--KLPVVAIG 462 (514)
Q Consensus 389 ~~~~~~~~----~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~--~~pv~a~G 462 (514)
++...++. ....++.+.+.+||.+|+.+|.++|+|+|++.+...+.. ...++...++.+.+ ++|+++.|
T Consensus 153 L~~~~l~~l~~~a~~lGl~~lvevh~~eEl~~A~~~ga~iIGinnr~l~t~-----~~dl~~~~~L~~~ip~~~~vIaes 227 (272)
T 3tsm_A 153 VDDDLAKELEDTAFALGMDALIEVHDEAEMERALKLSSRLLGVNNRNLRSF-----EVNLAVSERLAKMAPSDRLLVGES 227 (272)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHTTSCCSEEEEECBCTTTC-----CBCTHHHHHHHHHSCTTSEEEEES
T ss_pred cCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCEEEECCCCCccC-----CCChHHHHHHHHhCCCCCcEEEEC
Confidence 76544332 234578888899999999999999999998876443221 13567777777766 68999999
Q ss_pred CC-CcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHH
Q 010240 463 GI-GISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAV 505 (514)
Q Consensus 463 Gi-~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~ 505 (514)
|| +++++..++++|++ ||.+|++|+.++||.+.+++|...
T Consensus 228 GI~t~edv~~l~~~Ga~---gvLVG~almr~~d~~~~~~~l~~g 268 (272)
T 3tsm_A 228 GIFTHEDCLRLEKSGIG---TFLIGESLMRQHDVAAATRALLTG 268 (272)
T ss_dssp SCCSHHHHHHHHTTTCC---EEEECHHHHTSSCHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHcCCC---EEEEcHHHcCCcCHHHHHHHHHhc
Confidence 99 79999999999999 999999999999999999998753
No 110
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=99.46 E-value=6e-14 Score=138.51 Aligned_cols=140 Identities=12% Similarity=0.119 Sum_probs=105.2
Q ss_pred CcCEEEEcccCCHHHHHHHHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCCCC
Q 010240 89 QVDVVKTGMLPSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGGMQ 168 (514)
Q Consensus 89 ~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~ 168 (514)
+++++.++... ....+++.+++ ++++||+.... .+. .+.+ +.+++.+|+++||..|++.|+|...
T Consensus 140 ~~~~v~~~~~~---~~~~~~~~a~~----~v~~D~~~~~~----~~~---~~~~-~~~l~~~dil~~N~~E~~~l~g~~~ 204 (306)
T 3bf5_A 140 EYEYVHFSTGP---NYLDMAKSIRS----KIIFDPSQEIH----KYS---KDEL-KKFHEISYMSIFNDHEYRVFREMTG 204 (306)
T ss_dssp CEEEEEECSSS---SHHHHHHHCCS----EEEECCGGGGG----GSC---HHHH-HHHHHHCSEEEEEHHHHHHHHHHHC
T ss_pred CCCEEEECChH---HHHHHHHHhCC----cEEEcCchhhh----hcc---HHHH-HHHHhcCCEEEcCHHHHHHHhCCCC
Confidence 57888887653 34445555443 59999974210 111 2233 3677899999999999999987211
Q ss_pred CCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCCCCCCcchHHHHHHHHHHcCCCHH
Q 010240 169 VVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELAKGSPML 248 (514)
Q Consensus 169 ~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~a~i~~~l~~g~~l~ 248 (514)
... . ++ .|++|.|.+| .+++.+++.++++.++++ +||+||||+|+|+|++.|++|++++
T Consensus 205 ~~~-~-------~l------~vvvT~G~~G------a~~~~~~~~~~~~~~~v~-vDttGAGDaF~ag~~~~l~~g~~~~ 263 (306)
T 3bf5_A 205 LSS-P-------KV------TTIVTNGERG------SSLFMDGKKYDFPAIPSS-GDTVGAGDSFRAGLYLALYNRRSIE 263 (306)
T ss_dssp CSS-C-------SS------CEEEEEGGGE------EEEEETTEEEEEECCCCC-SCCTTHHHHHHHHHHHHHHTTCCHH
T ss_pred cCc-c-------cE------EEEEeecccC------eEEEeCCcEEEecCCcCC-CCCCCccHHHHHHHHHHHHcCCCHH
Confidence 110 0 11 1999999877 777777778888988888 9999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhc
Q 010240 249 SAVKVAKCFVETALDY 264 (514)
Q Consensus 249 ~A~~~A~~~~~~~i~~ 264 (514)
+|+++|++++..+++.
T Consensus 264 ~a~~~A~~~aa~~v~~ 279 (306)
T 3bf5_A 264 KGMIYGTIIAHHVIDD 279 (306)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999998888875
No 111
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=99.45 E-value=3.6e-14 Score=135.07 Aligned_cols=176 Identities=14% Similarity=0.152 Sum_probs=129.1
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEE------cCcHHHHHhCCCCeEEeCCCCC--
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLI------NDRIDIALACDADGVHLGQSDM-- 389 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v------~~~~~~a~~~ga~gvhl~~~~~-- 389 (514)
.+..+.++.+.++|++.++++++..+........+.+++++ ..++++++ .++++.+.+.|||+||++...+
T Consensus 30 ~~~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~-~~~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~ 108 (241)
T 1qo2_A 30 KDPVELVEKLIEEGFTLIHVVDLSNAIENSGENLPVLEKLS-EFAEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVLED 108 (241)
T ss_dssp SCHHHHHHHHHHTTCCCEEEEEHHHHHHCCCTTHHHHHHGG-GGGGGEEEESSCCSHHHHHHHHHTTCCEEEECHHHHHC
T ss_pred cCHHHHHHHHHHcCCCEEEEecccccccCCchhHHHHHHHH-hcCCcEEEECCCCCHHHHHHHHHCCCCEEEECchHhhC
Confidence 35678889999999999999975432111111234455666 67899998 4567888899999999988532
Q ss_pred -C-HHHHHhhcCCCcEEEEecC---------------CHHH-HHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHH
Q 010240 390 -P-ARTARALLGPDKIIGVSCK---------------TPEE-AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVC 451 (514)
Q Consensus 390 -~-~~~~~~~~~~~~~ig~s~~---------------~~~e-~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~ 451 (514)
. ...+ +.++....++++++ ++.| +.++.+.|++++++..+..+.+. ...+++.+++++
T Consensus 109 p~~~~~~-~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~~---~g~~~~~i~~l~ 184 (241)
T 1qo2_A 109 PSFLKSL-REIDVEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEYGLEEIVHTEIEKDGTL---QEHDFSLTKKIA 184 (241)
T ss_dssp TTHHHHH-HTTTCEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTTTCCEEEEEETTHHHHT---CCCCHHHHHHHH
T ss_pred hHHHHHH-HHcCCcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhCCCCEEEEEeecccccC---CcCCHHHHHHHH
Confidence 2 3344 44444457889984 7766 57888999999988654332211 224799999999
Q ss_pred HcCCCCEEEECCCC-cccHHHHHHC-----C-CCCCceEEEeecccCCCCHHHHHHH
Q 010240 452 LASKLPVVAIGGIG-ISNASDVMKI-----G-VSNLKGVAVVSALFDRECILPESKK 501 (514)
Q Consensus 452 ~~~~~pv~a~GGi~-~~~~~~~~~~-----G-a~~~~gva~~~~i~~~~~~~~~~~~ 501 (514)
+.+++||+|.|||+ ++++.++++. | ++ ||++|++|+..+...+.+.+
T Consensus 185 ~~~~iPvia~GGI~~~~d~~~~~~~~~~~~G~ad---gv~vgsal~~~~~~~~~~~~ 238 (241)
T 1qo2_A 185 IEAEVKVLAAGGISSENSLKTAQKVHTETNGLLK---GVIVGRAFLEGILTVEVMKR 238 (241)
T ss_dssp HHHTCEEEEESSCCSHHHHHHHHHHHHHTTTSEE---EEEECHHHHTTSSCHHHHHH
T ss_pred HhcCCcEEEECCCCCHHHHHHHHhcccccCCeEe---EEEeeHHHHcCCCCHHHHHH
Confidence 88899999999998 6999999998 9 99 99999999977655444433
No 112
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=99.45 E-value=3.7e-13 Score=127.75 Aligned_cols=161 Identities=22% Similarity=0.172 Sum_probs=109.2
Q ss_pred cCEEEEcccCCHHHHHH---HHHHHhcCCCCcEEEecceecCCCCCCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCC
Q 010240 90 VDVVKTGMLPSTDLVKV---LLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGG 166 (514)
Q Consensus 90 ~~~i~~G~~~~~~~~~~---~~~~~~~~~~~~ivlDPv~~~~~g~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~ 166 (514)
.-+|.+|.+ +++..+. ..+.+.+.+.| +|+|||..... -+..+....+ +-...++|+||..|+..|+|.
T Consensus 59 al~iNiGtl-~~~~~~~m~~A~~~A~~~~~P-vVLDPVg~gas---~~R~~~~~~l---l~~~~~vIrgN~sEi~~L~g~ 130 (265)
T 3hpd_A 59 AVVINIGTL-DSGWRRSMVKATEIANELGKP-IVLDPVGAGAT---KFRTRVSLEI---LSRGVDVLKGNFGEISALLGE 130 (265)
T ss_dssp EEEEECTTC-CHHHHHHHHHHHHHHHHHTCC-EEEECTTBTTB---HHHHHHHHHH---HHHCCSEEEEEHHHHHHHHHH
T ss_pred eEEEECCCC-ChHHHHHHHHHHHHHHHcCCC-EEEcCCCCCCc---HHHHHHHHHH---HhcCCcEEcCCHHHHHHHhcc
Confidence 344445555 4444444 44555666665 99999865321 1112222222 223578999999999999872
Q ss_pred C--------CCCCHHHHHHHHHHHHhcCCCeEEEecccCCCCCCceEEEEeCCeEEEEeecccCCCC-CCCCcchHHHHH
Q 010240 167 M--------QVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRN-THGTGCTLASCI 237 (514)
Q Consensus 167 ~--------~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~GaGD~f~a~i 237 (514)
. ...+.++..++++++.+++...|++||.. +++.++++.+.++. +.+.+. .+|+||+++|.+
T Consensus 131 ~~~~~gvds~~~~~~d~~~~a~~lA~~~~~vVvlkG~~--------d~I~dg~~~~~~~~-G~~~m~~vtGtGc~Lsg~i 201 (265)
T 3hpd_A 131 EGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVTGAV--------DYVSDGRRTFAVYN-GHELLGRVTGTGCMVAALT 201 (265)
T ss_dssp HC----------CHHHHHHHHHHHHHHTTSEEEEESSS--------EEEECSSCEEEECC-CCGGGGGSTTHHHHHHHHH
T ss_pred cCCCCCccCccccHHHHHHHHHHHHHHhCCEEEEeCCC--------eEEEcCCEEEEECC-CChHhhcCCccchHHHHHH
Confidence 1 11345678889999998888899999987 88888877665543 445455 499999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHhccccc
Q 010240 238 AAELAKGSPMLSAVKVAKCFVETALDYSKDI 268 (514)
Q Consensus 238 ~~~l~~g~~l~~A~~~A~~~~~~~i~~~~~~ 268 (514)
+++++++ +..+|+..|+.+...+-+.+.+.
T Consensus 202 aa~lA~~-~~~~Aa~~a~~~~g~Age~Aa~~ 231 (265)
T 3hpd_A 202 GAFVAVT-EPLKATTSALVTFGIAAEKAYEE 231 (265)
T ss_dssp HHHHTTS-CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcC-ChHHHHHHHHHHHHHHHHHHHHh
Confidence 9999998 55678877877766666655443
No 113
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=99.44 E-value=1.4e-12 Score=121.48 Aligned_cols=193 Identities=19% Similarity=0.104 Sum_probs=132.4
Q ss_pred ceEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEE----EcC---c-HHH
Q 010240 302 LFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLL----IND---R-IDI 373 (514)
Q Consensus 302 ~~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~----v~~---~-~~~ 373 (514)
|+|++-.|... .++..+.++++ ..|++++++-.+.. ...-.+.++++++.. .+.++. +.+ + ++.
T Consensus 1 m~li~a~D~~~----~~~~~~~~~~~-~~~~diie~G~p~~-~~~g~~~i~~ir~~~--~~~~i~~~~~~~~~~~~~~~~ 72 (211)
T 3f4w_A 1 MKLQLALDELT----LPEAMVFMDKV-VDDVDIIEVGTPFL-IREGVNAIKAIKEKY--PHKEVLADAKIMDGGHFESQL 72 (211)
T ss_dssp CEEEEEECSCC----HHHHHHHHHHH-GGGCSEEEECHHHH-HHHTTHHHHHHHHHC--TTSEEEEEEEECSCHHHHHHH
T ss_pred CcEEEEeCCCC----HHHHHHHHHHh-hcCccEEEeCcHHH-HhccHHHHHHHHHhC--CCCEEEEEEEeccchHHHHHH
Confidence 35555556432 24567777776 47899998865210 111123444444431 144443 332 2 678
Q ss_pred HHhCCCCeEEeCCCCCC---HHHHHhhcCCCcEEEEe---cCCH-HHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHH
Q 010240 374 ALACDADGVHLGQSDMP---ARTARALLGPDKIIGVS---CKTP-EEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDG 446 (514)
Q Consensus 374 a~~~ga~gvhl~~~~~~---~~~~~~~~~~~~~ig~s---~~~~-~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~ 446 (514)
+.++|+|+++++..... ....+.....+..+++. ..|+ +++..+.+.|+|||.+.+-|.+.+.+ +.+++.
T Consensus 73 ~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g~~g~~~~---~~~~~~ 149 (211)
T 3f4w_A 73 LFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQAAG---RKPIDD 149 (211)
T ss_dssp HHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHHTCCEEEEECCHHHHHTT---CCSHHH
T ss_pred HHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHcCCCEEEEcCCCcccccC---CCCHHH
Confidence 88999999988765431 11222222235566654 3454 56889999999999887665543322 236899
Q ss_pred HHHHHHcC-CCCEEEECCCCcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHH
Q 010240 447 LKTVCLAS-KLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMD 508 (514)
Q Consensus 447 l~~~~~~~-~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~ 508 (514)
++++++.+ ++|+++.|||+++|+.+++++|++ ++.+||+|++++||.+.+++|++.+++
T Consensus 150 i~~l~~~~~~~~i~~~gGI~~~~~~~~~~~Gad---~vvvGsai~~~~d~~~~~~~l~~~~~~ 209 (211)
T 3f4w_A 150 LITMLKVRRKARIAVAGGISSQTVKDYALLGPD---VVIVGSAITHAADPAGEARKISQVLLQ 209 (211)
T ss_dssp HHHHHHHCSSCEEEEESSCCTTTHHHHHTTCCS---EEEECHHHHTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcEEEECCCCHHHHHHHHHcCCC---EEEECHHHcCCCCHHHHHHHHHHHHhh
Confidence 99999886 899999999999999999999999 999999999999999999999988875
No 114
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=99.43 E-value=7.1e-13 Score=129.39 Aligned_cols=149 Identities=18% Similarity=0.212 Sum_probs=121.7
Q ss_pred HHHHHhCCCCEEE----EEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHHHHHhhcC
Q 010240 324 VKAALEGGATIIQ----LREKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPARTARALLG 399 (514)
Q Consensus 324 ~~~~~~~Gv~~v~----lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~~~~~~~~ 399 (514)
++.+++.|+++|+ ++ ++.+..+.++.++++.+.|+++|.+++++- .++|.|+++.+.+
T Consensus 114 ve~a~~~GAdaV~vlv~~~-~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~--------~~~g~~v~~~~~~--------- 175 (304)
T 1to3_A 114 AQAVKRDGAKALKLLVLWR-SDEDAQQRLNMVKEFNELCHSNGLLSIIEP--------VVRPPRCGDKFDR--------- 175 (304)
T ss_dssp HHHHHHTTCCEEEEEEEEC-TTSCHHHHHHHHHHHHHHHHTTTCEEEEEE--------EECCCSSCSCCCH---------
T ss_pred HHHHHHcCCCEEEEEEEcC-CCccHHHHHHHHHHHHHHHHHcCCcEEEEE--------ECCCCccccCCCh---------
Confidence 7788999999999 55 444467788889999999999999999873 3457777665432
Q ss_pred CCcEEEEecCCHHH-HHHhhhCCCcEEEecc-ccCCCCCCCCccCCHHHHHHHHHc----CCCC-EEEECCCCcc----c
Q 010240 400 PDKIIGVSCKTPEE-AHQAWIDGANYIGCGG-VYPTNTKANNLTVGLDGLKTVCLA----SKLP-VVAIGGIGIS----N 468 (514)
Q Consensus 400 ~~~~ig~s~~~~~e-~~~a~~~g~d~v~~~~-vf~t~~k~~~~~~g~~~l~~~~~~----~~~p-v~a~GGi~~~----~ 468 (514)
-+++.+ ++.+.++|+||+.+.+ ++++. +++.+.++.+. +.+| |+++||++++ +
T Consensus 176 --------~~~v~~aa~~a~~lGaD~iKv~~~~~~~g--------~~~~~~~vv~~~~~~~~~P~Vv~aGG~~~~~~~~~ 239 (304)
T 1to3_A 176 --------EQAIIDAAKELGDSGADLYKVEMPLYGKG--------ARSDLLTASQRLNGHINMPWVILSSGVDEKLFPRA 239 (304)
T ss_dssp --------HHHHHHHHHHHTTSSCSEEEECCGGGGCS--------CHHHHHHHHHHHHHTCCSCEEECCTTSCTTTHHHH
T ss_pred --------hHHHHHHHHHHHHcCCCEEEeCCCcCCCC--------CHHHHHHHHHhccccCCCCeEEEecCCCHHHHHHH
Confidence 145555 8888999999998876 55321 67888887777 7999 9999999874 5
Q ss_pred HHHHHHCCCCCCceEEEeecccCC----CCHHHHH--------HHHHHHHHHH
Q 010240 469 ASDVMKIGVSNLKGVAVVSALFDR----ECILPES--------KKLHAVLMDA 509 (514)
Q Consensus 469 ~~~~~~~Ga~~~~gva~~~~i~~~----~~~~~~~--------~~~~~~~~~~ 509 (514)
+..++++|++ ||++||+||++ +||.+.+ ++|++++++.
T Consensus 240 ~~~a~~aGa~---Gv~vGRaI~q~~~~~~dp~~~~~~~~~~~~~~l~~iv~~~ 289 (304)
T 1to3_A 240 VRVAMEAGAS---GFLAGRAVWSSVIGLPDTELMLRDVSAPKLQRLGEIVDEM 289 (304)
T ss_dssp HHHHHHTTCC---EEEESHHHHGGGTTCSCHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCe---EEEEehHHhCccccCCCHHHHHHhhchHHHHHHHHHHhcC
Confidence 8999999999 99999999999 9999999 9999998875
No 115
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.41 E-value=2.1e-13 Score=130.06 Aligned_cols=169 Identities=20% Similarity=0.236 Sum_probs=124.4
Q ss_pred HHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEc------CcHHHHHhCCCCeEEeCCCCCC---
Q 010240 320 ITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLIN------DRIDIALACDADGVHLGQSDMP--- 390 (514)
Q Consensus 320 ~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~------~~~~~a~~~ga~gvhl~~~~~~--- 390 (514)
..+.++.+.++|+++++++..+......... ..++.+++..+++++++ ++++.+.+.|||+||++...+.
T Consensus 33 ~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~l~~p~ 111 (244)
T 2y88_A 33 AVDAALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKLDVQVELSGGIRDDESLAAALATGCARVNVGTAALENPQ 111 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHCHH
T ss_pred HHHHHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCCEEEECchHhhChH
Confidence 4567788889999999998642110000111 34455666778999987 5677888999999999885432
Q ss_pred -HHHHHhhcCCCcEEEEecC------------------C-HHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHH
Q 010240 391 -ARTARALLGPDKIIGVSCK------------------T-PEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTV 450 (514)
Q Consensus 391 -~~~~~~~~~~~~~ig~s~~------------------~-~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~ 450 (514)
.....+.++....++++++ + .+.+..+.+.|+|.|++..+.+..+. ...+++.++++
T Consensus 112 ~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~---~g~~~~~~~~l 188 (244)
T 2y88_A 112 WCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSEGCSRFVVTDITKDGTL---GGPNLDLLAGV 188 (244)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHTTCCCEEEEETTTTTTT---SCCCHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhCCCCEEEEEecCCcccc---CCCCHHHHHHH
Confidence 2333334444456787776 3 56678899999999988776543322 33579999999
Q ss_pred HHcCCCCEEEECCCC-cccHHHHHHC---CCCCCceEEEeecccCCCCH
Q 010240 451 CLASKLPVVAIGGIG-ISNASDVMKI---GVSNLKGVAVVSALFDRECI 495 (514)
Q Consensus 451 ~~~~~~pv~a~GGi~-~~~~~~~~~~---Ga~~~~gva~~~~i~~~~~~ 495 (514)
++..++||+|.|||+ ++++.+++++ |++ ||.+|++++..+..
T Consensus 189 ~~~~~ipvia~GGI~~~~d~~~~~~~~~~Gad---~v~vG~al~~~~~~ 234 (244)
T 2y88_A 189 ADRTDAPVIASGGVSSLDDLRAIATLTHRGVE---GAIVGKALYARRFT 234 (244)
T ss_dssp HTTCSSCEEEESCCCSHHHHHHHHTTGGGTEE---EEEECHHHHTTSSC
T ss_pred HHhCCCCEEEECCCCCHHHHHHHHhhccCCCC---EEEEcHHHHCCCcC
Confidence 988899999999999 4999999998 999 99999999977644
No 116
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=99.40 E-value=1.5e-12 Score=125.84 Aligned_cols=176 Identities=19% Similarity=0.173 Sum_probs=121.7
Q ss_pred CHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEc------CcHHHHHhCCCCeEEeCCCCC---
Q 010240 319 SITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLIN------DRIDIALACDADGVHLGQSDM--- 389 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~------~~~~~a~~~ga~gvhl~~~~~--- 389 (514)
+..+.++.+.++|++.+++++...+....-.....+.++++..++++++. ++++.+.+.|++++|++...+
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~~~~~ 110 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADKALAASVFHFRE 110 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGGGCCSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC----
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccCCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHHHhCC
Confidence 56788889999999999999876432111011234556677788999984 346777889999999998766
Q ss_pred -CHHHHHhhc---C--C-CcEEEEecC-------------------CHHH-HHHhhhCCCcEEEeccccCCCCCCCCccC
Q 010240 390 -PARTARALL---G--P-DKIIGVSCK-------------------TPEE-AHQAWIDGANYIGCGGVYPTNTKANNLTV 442 (514)
Q Consensus 390 -~~~~~~~~~---~--~-~~~ig~s~~-------------------~~~e-~~~a~~~g~d~v~~~~vf~t~~k~~~~~~ 442 (514)
+...+++.. + . ..+++++++ ++.| +..+.+.|+++|++..+-.+.+ ....
T Consensus 111 ~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~---~~g~ 187 (266)
T 2w6r_A 111 IDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGT---KSGY 187 (266)
T ss_dssp --CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTT---CSCC
T ss_pred CCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHHcCCCEEEEEeecCCCC---cCCC
Confidence 444444432 2 1 234788873 4555 6888999999998754332222 2234
Q ss_pred CHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccCCCCHHHHHH
Q 010240 443 GLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFDRECILPESK 500 (514)
Q Consensus 443 g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~ 500 (514)
+++.++++++..++||+|.|||+ ++++.+++++|++ ||.+|++|+..+...+.+.
T Consensus 188 ~~~~i~~l~~~~~ipvia~GGI~~~ed~~~~~~~Gad---gv~vgsal~~~~~~~~~~~ 243 (266)
T 2w6r_A 188 DTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGAD---AALAASVFHFREIDMRELK 243 (266)
T ss_dssp CHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHTCS---EEEESTTTC----------
T ss_pred CHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHcCCH---HHHccHHHHcCCCCHHHHH
Confidence 68999999988899999999998 6999999999999 9999999998765444333
No 117
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.35 E-value=1.8e-13 Score=130.66 Aligned_cols=178 Identities=16% Similarity=0.183 Sum_probs=56.4
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEc------CcHHHHHhCCCCeEEeCCCC---
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLIN------DRIDIALACDADGVHLGQSD--- 388 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~------~~~~~a~~~ga~gvhl~~~~--- 388 (514)
.+..+.++.+.+.|++.++++..+......-.....+.++++..+++++++ ++++.+.+.|||+||++...
T Consensus 35 ~~~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~d 114 (247)
T 3tdn_A 35 ILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVEN 114 (247)
T ss_dssp EEHHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEECCSHHHHHC
T ss_pred CCHHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHHhhC
Confidence 357888999999999999998875432110011234556777889999998 46777889999999998743
Q ss_pred CC-HHHHHhhcCCCc-EEEEecCC--------------------HHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHH
Q 010240 389 MP-ARTARALLGPDK-IIGVSCKT--------------------PEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDG 446 (514)
Q Consensus 389 ~~-~~~~~~~~~~~~-~ig~s~~~--------------------~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~ 446 (514)
+. ..++.+.++... ++++++++ .+.++.+.+.|+|++++..+....+ .....++.
T Consensus 115 p~~~~~~~~~~g~~~iv~~ld~~~~~~~~~v~~~g~~~~~~~~~~~~a~~~~~~G~~~i~~t~~~~~g~---~~g~~~~~ 191 (247)
T 3tdn_A 115 PSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGT---KSGYDTEM 191 (247)
T ss_dssp THHHHHHHHHHC--------------------------------------------------------------------
T ss_pred hHHHHHHHHHhCCCcEEEEEEeccCCCCEEEEECCCcccCCCCHHHHHHHHHhcCCCEEEEecccCCCC---cCCCCHHH
Confidence 22 334444454443 34666642 1235566778888887655432221 12346788
Q ss_pred HHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHH
Q 010240 447 LKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFDRECILPESKK 501 (514)
Q Consensus 447 l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~ 501 (514)
++++++.+++||+|.|||+ ++++.+++++|++ ||+++++++..+++...+++
T Consensus 192 ~~~i~~~~~iPvia~GGI~~~~d~~~~~~~Gad---~v~vg~al~~~p~~~~~~~~ 244 (247)
T 3tdn_A 192 IRFVRPLTTLPIIASGGAGKMEHFLEAFLRGAD---KVSINTAAVENPSLITQIAQ 244 (247)
T ss_dssp --------------------------------------------------------
T ss_pred HHHHHHhCCCCEEEECCCCCHHHHHHHHHcCCc---HhhccHHHHcCcHHHHHHHH
Confidence 8899888899999999997 9999999999999 99999999988887766554
No 118
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=99.34 E-value=3.2e-12 Score=122.08 Aligned_cols=183 Identities=20% Similarity=0.127 Sum_probs=123.2
Q ss_pred CHHHHHHHHHhCCCCEEEEEcC----CCC-----------------HHHHHHHHHHHHHHHhhcCceE--EE--c-----
Q 010240 319 SITDAVKAALEGGATIIQLREK----DAD-----------------TRGFLEAAKACLQICCVHGVPL--LI--N----- 368 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr~~----~~~-----------------~~~~~~~~~~~~~~~~~~~~~l--~v--~----- 368 (514)
.+.+.++++.++ ++++++-.+ ..+ .....+.+++++ +..+.++ +. +
T Consensus 20 ~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~---~~~~~pv~~~~~~~~~~~~ 95 (248)
T 1geq_A 20 STLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFR---RHSSTPIVLMTYYNPIYRA 95 (248)
T ss_dssp HHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHH---TTCCCCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH---hhCCCCEEEEeccchhhhc
Confidence 566777777777 999998733 221 122233444443 3334444 43 3
Q ss_pred ---CcHHHHHhCCCCeEEeCCCCCC----HHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCc-EEEeccccC-CCCCCCC
Q 010240 369 ---DRIDIALACDADGVHLGQSDMP----ARTARALLGPDKIIGVSCKTPEEAHQAWIDGAN-YIGCGGVYP-TNTKANN 439 (514)
Q Consensus 369 ---~~~~~a~~~ga~gvhl~~~~~~----~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d-~v~~~~vf~-t~~k~~~ 439 (514)
++++.+.++|++++|++..... .....+.++...+++++++|+.|..++...++| |+.+.++.. |.++.+.
T Consensus 96 ~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~~~~d~~i~~~~~~G~~g~~~~~ 175 (248)
T 1geq_A 96 GVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGTTGAREEI 175 (248)
T ss_dssp CHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHHCSSEEEEECCC-------CC
T ss_pred CHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHhcCCCeEEEEECCccCCCCCCC
Confidence 2456778999999999854331 111223345677888888898888887777788 887766621 2222223
Q ss_pred ccCCHHHHHHHHHcCCCCEEEECCCCc-ccHHHHHHCCCCCCceEEEeecccCCC--CHHHHHHHHHHHHHHH
Q 010240 440 LTVGLDGLKTVCLASKLPVVAIGGIGI-SNASDVMKIGVSNLKGVAVVSALFDRE--CILPESKKLHAVLMDA 509 (514)
Q Consensus 440 ~~~g~~~l~~~~~~~~~pv~a~GGi~~-~~~~~~~~~Ga~~~~gva~~~~i~~~~--~~~~~~~~~~~~~~~~ 509 (514)
.+..++.++++++..++||++.|||+. +|+.+++++|++ ++.+||+|++.. ++ +.+++|.+.+++.
T Consensus 176 ~~~~~~~i~~l~~~~~~pi~~~GGI~~~e~i~~~~~~Gad---~vivGsai~~~~~~~~-~~~~~~~~~~~~~ 244 (248)
T 1geq_A 176 PKTAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEGAN---GVVVGSALVKIIGEKG-REATEFLKKKVEE 244 (248)
T ss_dssp CHHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCS---EEEECHHHHHHHHHHG-GGCHHHHHHHHHH
T ss_pred ChhHHHHHHHHHhhcCCCEEEEeecCCHHHHHHHHHcCCC---EEEEcHHHHhhHhhCh-HHHHHHHHHHHHH
Confidence 334567899999888999999999998 999999999999 999999999652 44 6677777776554
No 119
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.30 E-value=2.2e-11 Score=121.17 Aligned_cols=167 Identities=13% Similarity=0.153 Sum_probs=123.6
Q ss_pred HHHHHHHHhCC-CCEEEEEcCCC-CHHHHHHHHHHHHHHHh-hcCceEEEc---------CcHHHHHhCCCCeEEeCCCC
Q 010240 321 TDAVKAALEGG-ATIIQLREKDA-DTRGFLEAAKACLQICC-VHGVPLLIN---------DRIDIALACDADGVHLGQSD 388 (514)
Q Consensus 321 ~~~~~~~~~~G-v~~v~lr~~~~-~~~~~~~~~~~~~~~~~-~~~~~l~v~---------~~~~~a~~~ga~gvhl~~~~ 388 (514)
.+.+.++.+.| +.++.. ... +++++.+.++++++.+. .+++.++++ +.++.+.+.|+++|+++..+
T Consensus 29 ~~la~av~~aGglG~i~~--~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~ 106 (328)
T 2gjl_A 29 AEMAAAVANAGGLATLSA--LTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGND 106 (328)
T ss_dssp HHHHHHHHHTTSBCEEET--TTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESC
T ss_pred HHHHHHHHHCCCeEEeCC--CCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCC
Confidence 45566666666 455532 223 37777777777777653 467888887 34678889999999887665
Q ss_pred CCHHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCC-ccCCHHHHHHHHHcCCCCEEEECCC-Cc
Q 010240 389 MPARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANN-LTVGLDGLKTVCLASKLPVVAIGGI-GI 466 (514)
Q Consensus 389 ~~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~-~~~g~~~l~~~~~~~~~pv~a~GGi-~~ 466 (514)
. ....+.....+..++.+++|++++..+.+.|+|++.+...... .+.+. ....++.++++++..++||++.||| ++
T Consensus 107 p-~~~~~~l~~~gi~vi~~v~t~~~a~~~~~~GaD~i~v~g~~~G-G~~G~~~~~~~~~l~~v~~~~~iPviaaGGI~~~ 184 (328)
T 2gjl_A 107 P-GEHIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECA-GHPGEDDIPGLVLLPAAANRLRVPIIASGGFADG 184 (328)
T ss_dssp C-HHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEEECTTCS-BCCCSSCCCHHHHHHHHHTTCCSCEEEESSCCSH
T ss_pred c-HHHHHHHHHcCCCEEeeCCCHHHHHHHHHcCCCEEEEECCCCC-cCCCCccccHHHHHHHHHHhcCCCEEEECCCCCH
Confidence 3 4444544445778888899999999999999999988432221 12111 2346788999988889999999999 58
Q ss_pred ccHHHHHHCCCCCCceEEEeecccCCCC
Q 010240 467 SNASDVMKIGVSNLKGVAVVSALFDREC 494 (514)
Q Consensus 467 ~~~~~~~~~Ga~~~~gva~~~~i~~~~~ 494 (514)
+++.+++++||+ ||.+||+|+...+
T Consensus 185 ~~v~~al~~GAd---gV~vGs~~~~~~e 209 (328)
T 2gjl_A 185 RGLVAALALGAD---AINMGTRFLATRE 209 (328)
T ss_dssp HHHHHHHHHTCS---EEEESHHHHTSSS
T ss_pred HHHHHHHHcCCC---EEEECHHHHcCcc
Confidence 999999999999 9999999997665
No 120
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=99.29 E-value=2.4e-11 Score=117.41 Aligned_cols=184 Identities=20% Similarity=0.176 Sum_probs=123.8
Q ss_pred HHHHHHHhCCCCEEEEEcCCCCHHHHHH------HHHHHHHHHhhcCceEEEc------CcHHHHHhCCCCeEEeCCCCC
Q 010240 322 DAVKAALEGGATIIQLREKDADTRGFLE------AAKACLQICCVHGVPLLIN------DRIDIALACDADGVHLGQSDM 389 (514)
Q Consensus 322 ~~~~~~~~~Gv~~v~lr~~~~~~~~~~~------~~~~~~~~~~~~~~~l~v~------~~~~~a~~~ga~gvhl~~~~~ 389 (514)
+.+...-++|++.+-+=++-+.+..+.. -.+.+.++.+...+|++.- +.++.+.++|||.|..+....
T Consensus 32 e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v~iPvl~k~~i~~ide~qil~aaGAD~Id~s~~~~ 111 (297)
T 4adt_A 32 EQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCISINVLAKVRIGHFVEAQILEELKVDMLDESEVLT 111 (297)
T ss_dssp HHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTCCSEEEEEEETTCHHHHHHHHHTTCSEEEEETTSC
T ss_pred HHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhcCCCEEEeccCCcHHHHHHHHHcCCCEEEcCCCCC
Confidence 3455566678877665432111111100 1222334444567888853 246677789999994433211
Q ss_pred C---HHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCC----------------------CCC------
Q 010240 390 P---ARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNT----------------------KAN------ 438 (514)
Q Consensus 390 ~---~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~----------------------k~~------ 438 (514)
+ ...+++. ..+..+.+.+||.+|+.++.+.|+|+|.......|.. ..+
T Consensus 112 ~~~li~~i~~~-~~g~~vvv~v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~ 190 (297)
T 4adt_A 112 MADEYNHINKH-KFKTPFVCGCTNLGEALRRISEGASMIRTKGEAGTGNIIEAIKHIRTVNNEIKYLCSLDESEVYNFAK 190 (297)
T ss_dssp CSCSSCCCCGG-GCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHH
T ss_pred HHHHHHHHHhc-CCCCeEEEEeCCHHHHHHHHhCCCCEEEECCCcCCCchHHHHHHHHHhhhhhhhhccccccccccccc
Confidence 1 1122221 1356666789999999999999999998864323221 001
Q ss_pred CccCCHHHHHHHHHcCCCCEE--EECCC-CcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 439 NLTVGLDGLKTVCLASKLPVV--AIGGI-GISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 439 ~~~~g~~~l~~~~~~~~~pv~--a~GGi-~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
.....++.++++++..++||+ +.||| +++++..++++||+ +|.+||+|++++||.+.+++|++.+++.
T Consensus 191 ~~~~~~~ll~~i~~~~~iPVivvA~GGI~t~~dv~~~~~~GAd---gVlVGsai~~a~dp~~~~~~l~~ai~~~ 261 (297)
T 4adt_A 191 KLRAPIDLILLTRKLKRLPVVNFAAGGIATPADAAMCMQLGMD---GVFVGSGIFESENPQKMASSIVMAVSNF 261 (297)
T ss_dssp HHTCCHHHHHHHHHHTSCSSEEEEESCCCSHHHHHHHHHTTCS---CEEESHHHHTSSCHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHhcCCCeEEEecCCCCCHHHHHHHHHcCCC---EEEEhHHHHcCCCHHHHHHHHHHHHHhh
Confidence 013468889999888888876 99999 89999999999999 9999999999999999999999998865
No 121
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=99.27 E-value=3.1e-12 Score=119.56 Aligned_cols=195 Identities=11% Similarity=-0.043 Sum_probs=123.1
Q ss_pred ceEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEE----cC----cHHH
Q 010240 302 LFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLI----ND----RIDI 373 (514)
Q Consensus 302 ~~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v----~~----~~~~ 373 (514)
.+|++-.|-.. .++..+.+++ +++|++++++-..- +...-.+.++++++.. .+.++++ ++ ..+.
T Consensus 7 ~~lilalD~~~----~~~~~~~~~~-~~~~vd~ie~g~~~-~~~~G~~~i~~lr~~~--~~~~i~ld~~l~d~p~~~~~~ 78 (218)
T 3jr2_A 7 PMIQIALDQTN----LTDAVAVASN-VASYVDVIEVGTIL-AFAEGMKAVSTLRHNH--PNHILVCDMKTTDGGAILSRM 78 (218)
T ss_dssp CEEEEEECCSS----HHHHHHHHHH-HGGGCSEEEECHHH-HHHHTTHHHHHHHHHC--TTSEEEEEEEECSCHHHHHHH
T ss_pred CCeEEEeCCCC----HHHHHHHHHH-hcCCceEEEeCcHH-HHhcCHHHHHHHHHhC--CCCcEEEEEeecccHHHHHHH
Confidence 45666666542 2467777777 47889999985321 1111123344444321 1334432 22 3567
Q ss_pred HHhCCCCeEEeCCCCCC--HHH-HHhhcCCCcEEE---EecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHH
Q 010240 374 ALACDADGVHLGQSDMP--ART-ARALLGPDKIIG---VSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGL 447 (514)
Q Consensus 374 a~~~ga~gvhl~~~~~~--~~~-~~~~~~~~~~ig---~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l 447 (514)
+.++|+|++-++..... ... .+.....+..++ ..+.|++++..+.+.|+||+.+.+...+... +. ..+.+.+
T Consensus 79 ~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~d~l~~~T~~~~~~~~~~g~d~v~~~~~~~~~~~-g~-~~~~~~l 156 (218)
T 3jr2_A 79 AFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYGNWTMQDAKAWVDLGITQAIYHRSRDAELA-GI-GWTTDDL 156 (218)
T ss_dssp HHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECCSSCCHHHHHHHHHTTCCEEEEECCHHHHHH-TC-CSCHHHH
T ss_pred HHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccceeeeecCCHHHHHHHHHcCccceeeeeccccccC-CC-cCCHHHH
Confidence 88999999855443321 111 121222344444 2346888999999999999976332211111 11 1244444
Q ss_pred HHHHHc--CCCCEEEECCCCcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHHh
Q 010240 448 KTVCLA--SKLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDAV 510 (514)
Q Consensus 448 ~~~~~~--~~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~~ 510 (514)
+.+++. .++|+++.|||+++|+.+++++||+ ++++||+|++++||.+++ +|++.+++.+
T Consensus 157 ~~i~~~~~~~~pi~v~GGI~~~~~~~~~~aGAd---~vvvGsaI~~a~dp~~a~-~l~~~~~~~~ 217 (218)
T 3jr2_A 157 DKMRQLSALGIELSITGGIVPEDIYLFEGIKTK---TFIAGRALAGAEGQQTAA-ALREQIDRFW 217 (218)
T ss_dssp HHHHHHHHTTCEEEEESSCCGGGGGGGTTSCEE---EEEESGGGSHHHHHHHHH-HHHHHHHHHC
T ss_pred HHHHHHhCCCCCEEEECCCCHHHHHHHHHcCCC---EEEEchhhcCCCCHHHHH-HHHHHHHhhC
Confidence 444433 3899999999999999999999999 999999999999999999 9999988764
No 122
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=99.27 E-value=1e-10 Score=112.86 Aligned_cols=144 Identities=15% Similarity=0.172 Sum_probs=110.4
Q ss_pred HHHHHHHhCCCCEEEEEcC--CCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHHHHHhhcC
Q 010240 322 DAVKAALEGGATIIQLREK--DADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPARTARALLG 399 (514)
Q Consensus 322 ~~~~~~~~~Gv~~v~lr~~--~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~~~~~~~~ 399 (514)
..++.+++.|++.|.++.+ +.+..+.++.+.++.+.|++++++++++. +.|.|+.. ....+
T Consensus 129 ~~ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIie~---------~~G~~~~~---d~e~i----- 191 (295)
T 3glc_A 129 LSMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVT---------GVGKDMVR---DQRYF----- 191 (295)
T ss_dssp SCHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEEEE---------CC----CC---SHHHH-----
T ss_pred HHHHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEEEC---------CCCCccCC---CHHHH-----
Confidence 3477889999999999988 44456667778889999999999999864 23666631 11111
Q ss_pred CCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCcc------cHHHHH
Q 010240 400 PDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGIS------NASDVM 473 (514)
Q Consensus 400 ~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~~------~~~~~~ 473 (514)
...++.|.++|+|||-++ +|. +.++++++.+++||++.||++.+ ++.+++
T Consensus 192 -----------~~aariA~elGAD~VKt~---~t~----------e~~~~vv~~~~vPVv~~GG~~~~~~~~l~~v~~ai 247 (295)
T 3glc_A 192 -----------SLATRIAAEMGAQIIKTY---YVE----------KGFERIVAGCPVPIVIAGGKKLPEREALEMCWQAI 247 (295)
T ss_dssp -----------HHHHHHHHHTTCSEEEEE---CCT----------TTHHHHHHTCSSCEEEECCSCCCHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHhCCCEEEeC---CCH----------HHHHHHHHhCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 135788889999999655 221 34688888889999999999853 578889
Q ss_pred HCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 474 KIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 474 ~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
++|++ |+++|++||+++||.+.++++.+.+++.
T Consensus 248 ~aGA~---Gv~vGRnI~q~~dp~~~~~al~~ivh~~ 280 (295)
T 3glc_A 248 DQGAS---GVDMGRNIFQSDHPVAMMKAVQAVVHHN 280 (295)
T ss_dssp HTTCS---EEEESHHHHTSSSHHHHHHHHHHHHHHC
T ss_pred HhCCe---EEEeHHHHhcCcCHHHHHHHHHHHHhCC
Confidence 99999 9999999999999999999999998863
No 123
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=99.27 E-value=5.1e-11 Score=114.35 Aligned_cols=180 Identities=17% Similarity=0.171 Sum_probs=122.0
Q ss_pred HHHHHHHHHhCCCCEEEEEcCCCCH--HHHHHHHHHHHHHHhhcCceEEEcC-----------cHHHHHhCC-CCeEEe-
Q 010240 320 ITDAVKAALEGGATIIQLREKDADT--RGFLEAAKACLQICCVHGVPLLIND-----------RIDIALACD-ADGVHL- 384 (514)
Q Consensus 320 ~~~~~~~~~~~Gv~~v~lr~~~~~~--~~~~~~~~~~~~~~~~~~~~l~v~~-----------~~~~a~~~g-a~gvhl- 384 (514)
....++.+.++|++++++-.+..+. ... ..+.+..++.+.+++.|. ..+.+.++| ++.+.+
T Consensus 25 ~~~~~~~l~~~Gad~ielg~pr~~~~g~~~----~~~~~~l~~~~~~~~pn~~~~~~~~~~~~f~~~a~~agg~~~i~l~ 100 (264)
T 1xm3_A 25 FDIQKEAVAVSESDILTFAVRRMNIFEASQ----PNFLEQLDLSKYTLLPNTAGASTAEEAVRIARLAKASGLCDMIKVE 100 (264)
T ss_dssp HHHHHHHHHHHTCSEEEEETTSSTTC-----------CTTCCGGGSEEEEECTTCSSHHHHHHHHHHHHHTTCCSSEEEC
T ss_pred HHHHHHHHHHcCCeEEEEcccccccCCCCH----HHHHHHHHhcCCeEcCCccccCCHHHHHHHHHHHHHcCCCCeEEEe
Confidence 4455667777899999997653332 111 122222334456665543 123444554 444433
Q ss_pred --CCCC--CC-----HHHHHhhcCCCcEEE-EecCCHHHHHHhhhCCCcEEEe-ccccCCCCCCCCccCCHHHHHHHHHc
Q 010240 385 --GQSD--MP-----ARTARALLGPDKIIG-VSCKTPEEAHQAWIDGANYIGC-GGVYPTNTKANNLTVGLDGLKTVCLA 453 (514)
Q Consensus 385 --~~~~--~~-----~~~~~~~~~~~~~ig-~s~~~~~e~~~a~~~g~d~v~~-~~vf~t~~k~~~~~~g~~~l~~~~~~ 453 (514)
+... .+ ...+++..+++..++ .+++|.++++++.+.|+|||.. +.++.+.. + ..+++.++++++.
T Consensus 101 i~~d~~~~~~e~~~~~~~a~~~~~~g~~vi~~~~~~~~~a~~~~~~gad~v~~~~~~~Gt~~--~--~~~~~~l~~i~~~ 176 (264)
T 1xm3_A 101 VIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAIMPGASPIGSGQ--G--ILNPLNLSFIIEQ 176 (264)
T ss_dssp CBCCTTTCCBCHHHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHTCSCBEECSSSTTCCC--C--CSCHHHHHHHHHH
T ss_pred ecCCCcccccchHHHHHHHHHHHCCCeEEEEEcCCCHHHHHHHHHhCCCEEEECCcccCCCC--C--CCCHHHHHHHHhc
Confidence 2211 11 122333334466666 7889999999999999999855 55554432 1 2358899999988
Q ss_pred CCCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHHh
Q 010240 454 SKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDAV 510 (514)
Q Consensus 454 ~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~~ 510 (514)
.++||++.|||+ ++++.+++++||+ ||.+||+|++++||.+.+++|++.+++.+
T Consensus 177 ~~iPviv~gGI~t~eda~~~~~~GAd---gViVGSAi~~a~dp~~~~~~l~~~v~~~~ 231 (264)
T 1xm3_A 177 AKVPVIVDAGIGSPKDAAYAMELGAD---GVLLNTAVSGADDPVKMARAMKLAVEAGR 231 (264)
T ss_dssp CSSCBEEESCCCSHHHHHHHHHTTCS---EEEESHHHHTSSSHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHcCCC---EEEEcHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 899999999996 9999999999999 99999999999999999999999988754
No 124
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.23 E-value=2.7e-11 Score=120.54 Aligned_cols=166 Identities=17% Similarity=0.177 Sum_probs=122.0
Q ss_pred HHHHHHHHhCC-CCEEEEEcCCCCHHHHHHHHHHHHHHHh-hcCceEEE-c----CcHHHHHhCCCCeEEeCCCCCCHHH
Q 010240 321 TDAVKAALEGG-ATIIQLREKDADTRGFLEAAKACLQICC-VHGVPLLI-N----DRIDIALACDADGVHLGQSDMPART 393 (514)
Q Consensus 321 ~~~~~~~~~~G-v~~v~lr~~~~~~~~~~~~~~~~~~~~~-~~~~~l~v-~----~~~~~a~~~ga~gvhl~~~~~~~~~ 393 (514)
.+.+..+.++| +.++..+ ..+.+++.+.++++++++. .+++.+++ + +..+.+.+.|+|+|+++...+ ...
T Consensus 26 ~~la~av~~aG~lG~i~~~--~~~~~~~~~~i~~i~~~~~~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~g~p-~~~ 102 (332)
T 2z6i_A 26 GDLAGAVSKAGGLGIIGGG--NAPKEVVKANIDKIKSLTDKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAGNP-SKY 102 (332)
T ss_dssp HHHHHHHHHHTSBEEEECT--TCCHHHHHHHHHHHHHHCCSCEEEEECTTSTTHHHHHHHHHHTTCSEEEECSSCG-GGT
T ss_pred HHHHHHHHhCCCcEEeCCC--CCCHHHHHHHHHHHHHhcCCCEEEEecCCCCCHHHHHHHHHHCCCCEEEECCCCh-HHH
Confidence 34555666666 4666553 4577777777777777652 45666666 2 346778899999999987643 233
Q ss_pred HHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHH
Q 010240 394 ARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDV 472 (514)
Q Consensus 394 ~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~ 472 (514)
++.....+..++..++++++++.+.+.|+|++.+... .+..+.+ ....++.++++++..++||++.|||+ ++++.++
T Consensus 103 i~~l~~~g~~v~~~v~~~~~a~~~~~~GaD~i~v~g~-~~GG~~g-~~~~~~ll~~i~~~~~iPViaaGGI~~~~~~~~a 180 (332)
T 2z6i_A 103 MERFHEAGIIVIPVVPSVALAKRMEKIGADAVIAEGM-EAGGHIG-KLTTMTLVRQVATAISIPVIAAGGIADGEGAAAG 180 (332)
T ss_dssp HHHHHHTTCEEEEEESSHHHHHHHHHTTCSCEEEECT-TSSEECC-SSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHH
T ss_pred HHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEEEECC-CCCCCCC-CccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHH
Confidence 3333335778888999999999999999999988432 1222222 23467889999988899999999998 9999999
Q ss_pred HHCCCCCCceEEEeecccCCCC
Q 010240 473 MKIGVSNLKGVAVVSALFDREC 494 (514)
Q Consensus 473 ~~~Ga~~~~gva~~~~i~~~~~ 494 (514)
+++||+ ||.+||+|+..++
T Consensus 181 l~~GAd---gV~vGs~~l~~~e 199 (332)
T 2z6i_A 181 FMLGAE---AVQVGTRFVVAKE 199 (332)
T ss_dssp HHTTCS---EEEECHHHHTBTT
T ss_pred HHcCCC---EEEecHHHhcCcc
Confidence 999999 9999999997654
No 125
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.23 E-value=4.2e-11 Score=118.67 Aligned_cols=165 Identities=16% Similarity=0.149 Sum_probs=122.7
Q ss_pred HHHHHHHHhCC-CCEEEEEcCCCCHHHHHHHHHHHHHHHh-hcCceEEE-----cCcHHHHHhCCCCeEEeCCCCCCHHH
Q 010240 321 TDAVKAALEGG-ATIIQLREKDADTRGFLEAAKACLQICC-VHGVPLLI-----NDRIDIALACDADGVHLGQSDMPART 393 (514)
Q Consensus 321 ~~~~~~~~~~G-v~~v~lr~~~~~~~~~~~~~~~~~~~~~-~~~~~l~v-----~~~~~~a~~~ga~gvhl~~~~~~~~~ 393 (514)
.+.+.++.++| +.++. ....+++++.+.++++++.+. .+++.+++ .+.++.+.+.|+++|++...++ ...
T Consensus 40 ~~la~av~~aGglG~i~--~~~~~~~~l~~~i~~i~~~~~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~g~p-~~~ 116 (326)
T 3bo9_A 40 PTLAAAVSEAGGLGIIG--SGAMKPDDLRKAISELRQKTDKPFGVNIILVSPWADDLVKVCIEEKVPVVTFGAGNP-TKY 116 (326)
T ss_dssp HHHHHHHHHTTSBEEEE--CTTCCHHHHHHHHHHHHTTCSSCEEEEEETTSTTHHHHHHHHHHTTCSEEEEESSCC-HHH
T ss_pred HHHHHHHHhCCCcEEeC--CCCCCHHHHHHHHHHHHHhcCCCEEEEEeccCCCHHHHHHHHHHCCCCEEEECCCCc-HHH
Confidence 45566666666 45554 344577777777777766552 35566666 2356678899999999987764 455
Q ss_pred HHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEec-cccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHH
Q 010240 394 ARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCG-GVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASD 471 (514)
Q Consensus 394 ~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~-~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~ 471 (514)
.+.....+..++.++++++++..+.+.|+|+|.+. +-+.+ +.+ ....++.++++++..++||++.|||+ ++|+.+
T Consensus 117 ~~~l~~~g~~v~~~v~s~~~a~~a~~~GaD~i~v~g~~~GG--~~G-~~~~~~ll~~i~~~~~iPviaaGGI~~~~dv~~ 193 (326)
T 3bo9_A 117 IRELKENGTKVIPVVASDSLARMVERAGADAVIAEGMESGG--HIG-EVTTFVLVNKVSRSVNIPVIAAGGIADGRGMAA 193 (326)
T ss_dssp HHHHHHTTCEEEEEESSHHHHHHHHHTTCSCEEEECTTSSE--ECC-SSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHH
T ss_pred HHHHHHcCCcEEEEcCCHHHHHHHHHcCCCEEEEECCCCCc--cCC-CccHHHHHHHHHHHcCCCEEEECCCCCHHHHHH
Confidence 55555567888889999999999999999999884 32221 111 22467889999888899999999998 999999
Q ss_pred HHHCCCCCCceEEEeecccCCCC
Q 010240 472 VMKIGVSNLKGVAVVSALFDREC 494 (514)
Q Consensus 472 ~~~~Ga~~~~gva~~~~i~~~~~ 494 (514)
++++||+ ||.+||+|+..++
T Consensus 194 al~~GA~---gV~vGs~~~~~~e 213 (326)
T 3bo9_A 194 AFALGAE---AVQMGTRFVASVE 213 (326)
T ss_dssp HHHHTCS---EEEESHHHHTBSS
T ss_pred HHHhCCC---EEEechHHHcCcc
Confidence 9999999 9999999996654
No 126
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=99.23 E-value=6.7e-12 Score=120.62 Aligned_cols=139 Identities=21% Similarity=0.176 Sum_probs=102.5
Q ss_pred hCCCCEEEEEcCCCCHHHHHHHHHHHHH-HHhhc---CceEEEcCcHHHHHhCCCCeEEeCCCCCCHHHHHhhcCCCcEE
Q 010240 329 EGGATIIQLREKDADTRGFLEAAKACLQ-ICCVH---GVPLLINDRIDIALACDADGVHLGQSDMPARTARALLGPDKII 404 (514)
Q Consensus 329 ~~Gv~~v~lr~~~~~~~~~~~~~~~~~~-~~~~~---~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~~~~~~~~~~~~i 404 (514)
..++.++.-|...+..+.+.+++-.+-. ..+++ +..++.++|++.+ +|+ +.....+|+..++...+
T Consensus 130 ~~~~~i~~TRKt~Pglr~~~kyAv~~GGg~nHR~~L~d~~LIkdnHi~~a-----ggi-----~~av~~ar~~~~~~~~I 199 (286)
T 1x1o_A 130 GTKAQILDTRKTTPGLRALEKYAVRVGGGRNHRYGLFDGILLKENHVRAA-----GGV-----GEAVRRAKARAPHYLKV 199 (286)
T ss_dssp TSSCEEECCSCCCTTCHHHHHHHHHHHTCBCCCSSSSSCEEECHHHHHHH-----TSH-----HHHHHHHHHHSCTTSCE
T ss_pred CCCcEEEEcCCCChhhHHHHHHHHHhCCCcccccccccceEEECCHHHHh-----CCH-----HHHHHHHHHhCCCCCEE
Confidence 3356677777777666666665554432 22333 3467777777554 233 23456777777777899
Q ss_pred EEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC--CCCEEEECCCCcccHHHHHHCCCCCCce
Q 010240 405 GVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS--KLPVVAIGGIGISNASDVMKIGVSNLKG 482 (514)
Q Consensus 405 g~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~--~~pv~a~GGi~~~~~~~~~~~Ga~~~~g 482 (514)
+++|+|++|+++|.+.|+|||.+++++++. ++++++.. ++|+.|+|||+++|+.++.++|++ +
T Consensus 200 gVev~t~eea~eA~~aGaD~I~ld~~~~~~------------~k~av~~v~~~ipi~AsGGIt~eni~~~a~tGvD---~ 264 (286)
T 1x1o_A 200 EVEVRSLEELEEALEAGADLILLDNFPLEA------------LREAVRRVGGRVPLEASGNMTLERAKAAAEAGVD---Y 264 (286)
T ss_dssp EEEESSHHHHHHHHHHTCSEEEEESCCHHH------------HHHHHHHHTTSSCEEEESSCCHHHHHHHHHHTCS---E
T ss_pred EEEeCCHHHHHHHHHcCCCEEEECCCCHHH------------HHHHHHHhCCCCeEEEEcCCCHHHHHHHHHcCCC---E
Confidence 999999999999999999999999987643 33443333 699999999999999999999999 9
Q ss_pred EEEeecccCC
Q 010240 483 VAVVSALFDR 492 (514)
Q Consensus 483 va~~~~i~~~ 492 (514)
|++++.++++
T Consensus 265 IsVgs~~~~a 274 (286)
T 1x1o_A 265 VSVGALTHSA 274 (286)
T ss_dssp EECTHHHHSC
T ss_pred EEEcHHHcCC
Confidence 9998877654
No 127
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=99.22 E-value=7.7e-13 Score=127.21 Aligned_cols=101 Identities=26% Similarity=0.286 Sum_probs=90.1
Q ss_pred EecCCHHHHHH-hhhCCCcE-----------------EEeccccCCCCCCCCccCCHHHHHHHHHcCCCCE--EEECCC-
Q 010240 406 VSCKTPEEAHQ-AWIDGANY-----------------IGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPV--VAIGGI- 464 (514)
Q Consensus 406 ~s~~~~~e~~~-a~~~g~d~-----------------v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv--~a~GGi- 464 (514)
+||||.+|+.. |.+.|+|| +.+||+|+|.||+.....+++.++++++...+|| ++.|||
T Consensus 173 ~s~~~~~El~~~A~~~gadyv~~~~~vt~~~G~~~r~Lg~G~Vf~T~TK~~~~~~~lell~~i~~~~~IPVV~VAeGGI~ 252 (330)
T 2yzr_A 173 LQRMTDEEVYGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKLGRLPVVNFAAGGVA 252 (330)
T ss_dssp HTTSCHHHHHHHHHHHHGGGGHHHHHHHHHTTSCSCCCTTSEEETTEEHHHHHHHHHHHHHHHHHHTSCSSEEEECSCCC
T ss_pred hccCCHHHHHHHHHHcCCCEeecccchhhhccccccccccccccCCCcccCCCcchHHHHHHHHHhCCCCeEEEEECCCC
Confidence 56999999965 88999999 7789999999997654446799999998778998 699999
Q ss_pred CcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 465 GISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 465 ~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
+++|+..++++|++ ||++||+|+.++||.+.+++|++.++..
T Consensus 253 Tpeda~~~l~~GaD---gV~VGsaI~~a~dP~~aar~l~~ai~~~ 294 (330)
T 2yzr_A 253 TPADAALMMQLGSD---GVFVGSGIFKSENPLERARAIVEATYNY 294 (330)
T ss_dssp SHHHHHHHHHTTCS---CEEESHHHHTSSCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHcCcC---EEeeHHHHhcCCCHHHHHHHHHHHHHhc
Confidence 69999999999999 9999999999999999999999998764
No 128
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.10 E-value=3.9e-10 Score=112.46 Aligned_cols=163 Identities=21% Similarity=0.214 Sum_probs=109.1
Q ss_pred HHHHH-HHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEE------cCcHHHHHhCCCCeEEeCC--CCCC--
Q 010240 322 DAVKA-ALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLI------NDRIDIALACDADGVHLGQ--SDMP-- 390 (514)
Q Consensus 322 ~~~~~-~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v------~~~~~~a~~~ga~gvhl~~--~~~~-- 390 (514)
+.+.+ +..+|+.+++ +..+.+++.+.++++++.. ++.+.+.+ .+.++.+.+.|++.||+.. ...+
T Consensus 61 ~lA~avA~aGGlg~i~---~~~s~e~~~~~i~~vk~~~-~l~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~~~~ 136 (366)
T 4fo4_A 61 RLAIALAQEGGIGFIH---KNMSIEQQAAQVHQVKISG-GLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGV 136 (366)
T ss_dssp HHHHHHHHTTCEEEEC---SSSCHHHHHHHHHHHHTTT-SCCCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTSHHH
T ss_pred HHHHHHHHcCCceEee---cCCCHHHHHHHHHHHHhcC-ceeEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCCHHH
Confidence 44433 4467777775 5678888877777776532 34444443 2456778899999999832 2221
Q ss_pred ---HHHHHhhcCCCcE-EEEecCCHHHHHHhhhCCCcEEEeccccCCCC-----CCCCccCCHHHHHHHHH---cCCCCE
Q 010240 391 ---ARTARALLGPDKI-IGVSCKTPEEAHQAWIDGANYIGCGGVYPTNT-----KANNLTVGLDGLKTVCL---ASKLPV 458 (514)
Q Consensus 391 ---~~~~~~~~~~~~~-ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~-----k~~~~~~g~~~l~~~~~---~~~~pv 458 (514)
+..+++.+ ++.. +..++.|+++++.+.+.|+|+|.+| ++|... ..+.....+..+.++++ ..++||
T Consensus 137 ~~~I~~ik~~~-p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG-~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPV 214 (366)
T 4fo4_A 137 LQRIRETRAAY-PHLEIIGGNVATAEGARALIEAGVSAVKVG-IGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPV 214 (366)
T ss_dssp HHHHHHHHHHC-TTCEEEEEEECSHHHHHHHHHHTCSEEEEC-SSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCE
T ss_pred HHHHHHHHHhc-CCCceEeeeeCCHHHHHHHHHcCCCEEEEe-cCCCCCCCcccccCcccchHHHHHHHHHHHhhcCCeE
Confidence 11234443 2444 4457999999999999999999985 233211 11111123455666554 458999
Q ss_pred EEECCC-CcccHHHHHHCCCCCCceEEEeecccCCC
Q 010240 459 VAIGGI-GISNASDVMKIGVSNLKGVAVVSALFDRE 493 (514)
Q Consensus 459 ~a~GGi-~~~~~~~~~~~Ga~~~~gva~~~~i~~~~ 493 (514)
+|.||| +++++.+++++||+ +|.+||.|...+
T Consensus 215 IA~GGI~~~~di~kala~GAd---~V~vGs~f~~t~ 247 (366)
T 4fo4_A 215 IADGGIRFSGDISKAIAAGAS---CVMVGSMFAGTE 247 (366)
T ss_dssp EEESCCCSHHHHHHHHHTTCS---EEEESTTTTTBT
T ss_pred EEeCCCCCHHHHHHHHHcCCC---EEEEChHhhcCC
Confidence 999999 68999999999999 999999998643
No 129
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.00 E-value=1.4e-09 Score=108.70 Aligned_cols=163 Identities=20% Similarity=0.223 Sum_probs=107.7
Q ss_pred HHHHH-HHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHh-hcCceEEEc--CcHHHHHhCCCCeEEeCCCCCC-------
Q 010240 322 DAVKA-ALEGGATIIQLREKDADTRGFLEAAKACLQICC-VHGVPLLIN--DRIDIALACDADGVHLGQSDMP------- 390 (514)
Q Consensus 322 ~~~~~-~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~-~~~~~l~v~--~~~~~a~~~ga~gvhl~~~~~~------- 390 (514)
+...+ +.++|+.+++ +..+.++..+.++++++.+. .+++.+.++ +.++.+.+.|+|.+|+......
T Consensus 60 ~lA~avA~~GGlgii~---~~~s~e~~~~~I~~vk~~~~~pvga~ig~~~~e~a~~l~eaGad~I~ld~a~G~~~~~~~~ 136 (361)
T 3khj_A 60 LMAVGMARLGGIGIIH---KNMDMESQVNEVLKVKNSGGLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAHGHSLNIIRT 136 (361)
T ss_dssp HHHHHHHHTTCEEEEC---SSSCHHHHHHHHHHHHHTTCCCCEEEECTTCHHHHHHHHHTTCSEEEECCSCCSBHHHHHH
T ss_pred HHHHHHHHcCCCeEEe---cCCCHHHHHHHHHHHHhccCceEEEEeCCCHHHHHHHHHHcCcCeEEEeCCCCCcHHHHHH
Confidence 44443 4567777775 56788887777777765432 123333333 4567788999999998543321
Q ss_pred HHHHHhhcCCCcEEE-EecCCHHHHHHhhhCCCcEEEeccccCCC---C--CCCCccCCHHHHHHHH---HcCCCCEEEE
Q 010240 391 ARTARALLGPDKIIG-VSCKTPEEAHQAWIDGANYIGCGGVYPTN---T--KANNLTVGLDGLKTVC---LASKLPVVAI 461 (514)
Q Consensus 391 ~~~~~~~~~~~~~ig-~s~~~~~e~~~a~~~g~d~v~~~~vf~t~---~--k~~~~~~g~~~l~~~~---~~~~~pv~a~ 461 (514)
...+++.+ +..+. ..+.|+++++.+.+.|+|+|.+| +.+.. + ..+.....++.+.+++ +..++||+|.
T Consensus 137 i~~i~~~~--~~~Vivg~v~t~e~A~~l~~aGaD~I~VG-~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~ 213 (361)
T 3khj_A 137 LKEIKSKM--NIDVIVGNVVTEEATKELIENGADGIKVG-IGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIAD 213 (361)
T ss_dssp HHHHHHHC--CCEEEEEEECSHHHHHHHHHTTCSEEEEC-SSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHhc--CCcEEEccCCCHHHHHHHHHcCcCEEEEe-cCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEEE
Confidence 12223333 33333 47899999999999999999884 12211 0 0111112355566654 3358999999
Q ss_pred CCC-CcccHHHHHHCCCCCCceEEEeecccCCC
Q 010240 462 GGI-GISNASDVMKIGVSNLKGVAVVSALFDRE 493 (514)
Q Consensus 462 GGi-~~~~~~~~~~~Ga~~~~gva~~~~i~~~~ 493 (514)
||| +++++.+++++||+ +|.+||+|+..+
T Consensus 214 GGI~~~~di~kala~GAd---~V~vGs~~~~t~ 243 (361)
T 3khj_A 214 GGIRYSGDIGKALAVGAS---SVMIGSILAGTE 243 (361)
T ss_dssp SCCCSHHHHHHHHHHTCS---EEEESTTTTTBT
T ss_pred CCCCCHHHHHHHHHcCCC---EEEEChhhhcCC
Confidence 999 69999999999999 999999998653
No 130
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=98.99 E-value=2.5e-09 Score=99.80 Aligned_cols=150 Identities=21% Similarity=0.213 Sum_probs=106.4
Q ss_pred HHHHHhhcCceEEE----cC--cHHHHHhCCCCeEEeCCCCCCH---HHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcE
Q 010240 354 CLQICCVHGVPLLI----ND--RIDIALACDADGVHLGQSDMPA---RTARALLGPDKIIGVSCKTPEEAHQAWIDGANY 424 (514)
Q Consensus 354 ~~~~~~~~~~~l~v----~~--~~~~a~~~ga~gvhl~~~~~~~---~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~ 424 (514)
|+++-....+|++- .. ..+...++|+|.|--+..-.+. ..+.+ ...+..+.+.|+|++|+.++.+.|+|+
T Consensus 60 I~~I~~aVsIPVm~k~righ~~EAqilea~GaD~IDesevltpad~~~~I~k-~~f~vpfv~~~~~l~EAlrri~eGA~m 138 (291)
T 3o07_A 60 IKDIMNSVSIPVMAKVRIGHFVEAQIIEALEVDYIDESEVLTPADWTHHIEK-DKFKVPFVCGAKDLGEALRRINEGAAM 138 (291)
T ss_dssp HHHHHTTCSSCEEEEEETTCHHHHHHHHHTTCSEEEEETTSCCSCSSCCCCG-GGCSSCEEEEESSHHHHHHHHHHTCSE
T ss_pred HHHHHHhCCCCeEEEEecCcHHHHHHHHHcCCCEEecccCCCHHHHHHHhhh-hcCCCcEEeeCCCHHHHHHHHHCCCCE
Confidence 33444455677753 22 3556678999988332211111 11111 113456677899999999999999999
Q ss_pred EEec--------------------------cccC-----CCCCCCCccCCHHHHHHHHHcCCCCEEE--ECCC-CcccHH
Q 010240 425 IGCG--------------------------GVYP-----TNTKANNLTVGLDGLKTVCLASKLPVVA--IGGI-GISNAS 470 (514)
Q Consensus 425 v~~~--------------------------~vf~-----t~~k~~~~~~g~~~l~~~~~~~~~pv~a--~GGi-~~~~~~ 470 (514)
|... ..+. |..+. ....|+.++++++..++||++ -||| +++++.
T Consensus 139 IrTtge~gtg~v~~av~h~r~~~~~i~~l~g~~t~~el~~~a~~--~~ad~elI~~Ike~~~IPVV~IAnGGI~TpedA~ 216 (291)
T 3o07_A 139 IRTKGEAGTGDVSEAVKHIRRITEEIKACQQLKSEDDIAKVAEE--MRVPVSLLKDVLEKGKLPVVNFAAGGVATPADAA 216 (291)
T ss_dssp EEECCCTTSCCTHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHH--HTSCHHHHHHHHHHTSCSSCEEBCSSCCSHHHHH
T ss_pred EEecCcCCCccHHHHHHHHHHHHHHHHHHHcCCCHHHhhhcccc--cCCCHHHHHHHHHccCCCEEEecCCCCCCHHHHH
Confidence 9753 1100 00011 134699999999988899865 5999 799999
Q ss_pred HHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 471 DVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 471 ~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
.++++|++ ||.+||+++.++||.+.+++|++.+..+
T Consensus 217 ~~le~GaD---GVmVGrAI~~s~DP~~~Akafv~Av~~~ 252 (291)
T 3o07_A 217 LLMQLGCD---GVFVGSGIFKSSNPVRLATAVVEATTHF 252 (291)
T ss_dssp HHHHTTCS---CEEECGGGGGSSCHHHHHHHHHHHHHTT
T ss_pred HHHHhCCC---EEEEchHHhCCCCHHHHHHHHHHHHHhc
Confidence 99999999 9999999999999999999999998765
No 131
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=98.95 E-value=4.3e-09 Score=97.99 Aligned_cols=194 Identities=12% Similarity=0.029 Sum_probs=125.4
Q ss_pred ceEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHH-HHHHHHHhhc-CceEEE----cC----cH
Q 010240 302 LFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDADTRGFLEAA-KACLQICCVH-GVPLLI----ND----RI 371 (514)
Q Consensus 302 ~~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~-~~~~~~~~~~-~~~l~v----~~----~~ 371 (514)
.+|++-.|-... ++..+.++++ ...+.++.+-. .-+...- ..+..+.+.+ +..+++ +| ..
T Consensus 6 ~~livAlD~~~~----~~a~~~~~~~-~~~~~~ikvg~-----~lf~~~G~~~v~~l~~~~p~~~iflDlKl~Dip~t~~ 75 (221)
T 3exr_A 6 PNLQVALDHSNL----KGAITAAVSV-GNEVDVIEAGT-----VCLLQVGSELVEVLRSLFPDKIIVADTKCADAGGTVA 75 (221)
T ss_dssp CEEEEEECCSSH----HHHHHHHHHH-GGGCSEEEECH-----HHHHHHCTHHHHHHHHHCTTSEEEEEEEECSCHHHHH
T ss_pred CCEEEEeCCCCH----HHHHHHHHhh-CCCceEEEECH-----HHHHhcCHHHHHHHHHhCCCCcEEEEEEeeccHHHHH
Confidence 456666665321 3455665553 44588998822 2222221 1223333333 444543 23 23
Q ss_pred HHHHhCCCCe--EEeCCCCCCHHHHHhh---cC-CCcEEEEecCC---HHHHHHhhhCCCcEEEeccccCCCCCCCCccC
Q 010240 372 DIALACDADG--VHLGQSDMPARTARAL---LG-PDKIIGVSCKT---PEEAHQAWIDGANYIGCGGVYPTNTKANNLTV 442 (514)
Q Consensus 372 ~~a~~~ga~g--vhl~~~~~~~~~~~~~---~~-~~~~ig~s~~~---~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~ 442 (514)
+.+.++|+|. ||..........+.+. .+ ....+|+++.+ .+++....+.|+|++++...+.+.. .+. ..
T Consensus 76 ~~~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~~~~Vt~lts~~~~~~~~~~~~~~~~~v~~~a~~~~~-~Gv-v~ 153 (221)
T 3exr_A 76 KNNAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGDWTYDQAQQWLDAGISQAIYHQSRDALL-AGE-TW 153 (221)
T ss_dssp HHHHTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTTCEEEEECCSSCCHHHHHHHHHTTCCEEEEECCHHHHH-HTC-CC
T ss_pred HHHHHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCcceEEEEEcCCCCHHHHHHHHcCCHHHHHHHHHHhcCC-Ccc-cc
Confidence 4577899998 6876543222222221 12 34788988864 6667777788999998876555431 121 12
Q ss_pred CHHHHHHHHHcC--CCCEEEECCCCcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHHh
Q 010240 443 GLDGLKTVCLAS--KLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDAV 510 (514)
Q Consensus 443 g~~~l~~~~~~~--~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~~ 510 (514)
..+.++.+++.. +.++.+.|||+++|+..+.++|++ .+.+||+||+++||.++++++++.+++.|
T Consensus 154 s~~e~~~ir~~~~~~~~i~v~gGI~~~~~~~~~~aGad---~~VvG~~I~~a~dp~~a~~~~~~~~~~~~ 220 (221)
T 3exr_A 154 GEKDLNKVKKLIEMGFRVSVTGGLSVDTLKLFEGVDVF---TFIAGRGITEAKNPAGAARAFKDEIKRIW 220 (221)
T ss_dssp CHHHHHHHHHHHHHTCEEEEESSCCGGGGGGGTTCCCS---EEEECHHHHTSSSHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhcCCceEEEECCCCHHHHHHHHHCCCC---EEEECchhhCCCCHHHHHHHHHHHHHHHh
Confidence 345555555543 688999999999999999999999 99999999999999999999999988765
No 132
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=98.93 E-value=2e-09 Score=100.16 Aligned_cols=132 Identities=13% Similarity=0.118 Sum_probs=95.7
Q ss_pred HHHHHhCCCCeEEeCCC--CCCHHHHHh----hcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCC---CCCcc
Q 010240 371 IDIALACDADGVHLGQS--DMPARTARA----LLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTK---ANNLT 441 (514)
Q Consensus 371 ~~~a~~~ga~gvhl~~~--~~~~~~~~~----~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k---~~~~~ 441 (514)
++.+.++|||+|+++.. .++..+.++ ....+..+.+.+|+.+|..++.+.|++++.+.|++.-.|. ....+
T Consensus 75 ~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl~~iv~v~~~~e~~~~~~~~~~~i~~~~~~~iGtG~~~~t~~~ 154 (219)
T 2h6r_A 75 AEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLGLETIVCTNNINTSKAVAALSPDCIAVEPPELIGTGIPVSKANP 154 (219)
T ss_dssp HHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHTCEEEEEESSSHHHHHHTTTCCSEEEECCCC-------------
T ss_pred HHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHhCCCCEEEEEeccccccCCCCccCCH
Confidence 78899999999999886 344433332 2345888889999988988998999999999998851111 11111
Q ss_pred CCH-HHHHHHHHcC-CCCEEEECCCCc-ccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHH
Q 010240 442 VGL-DGLKTVCLAS-KLPVVAIGGIGI-SNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAV 505 (514)
Q Consensus 442 ~g~-~~l~~~~~~~-~~pv~a~GGi~~-~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~ 505 (514)
-.+ +.++.++... ++|+++.|||+. +++..+.+.|++ |+.+||++++++||.+.+++|++.
T Consensus 155 ~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~gaD---gvlVGsAi~~~~d~~~~~~~l~~~ 218 (219)
T 2h6r_A 155 EVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAALDLGAE---GVLLASGVVKAKNVEEAIRELIKF 218 (219)
T ss_dssp -CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTTCC---CEEESHHHHTCSSHHHHHHHHCC-
T ss_pred HHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCCCC---EEEEcHHHhCcccHHHHHHHHHHh
Confidence 112 2333333333 799999999985 677778999999 999999999999999999888654
No 133
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=98.80 E-value=2.1e-07 Score=87.60 Aligned_cols=170 Identities=19% Similarity=0.123 Sum_probs=119.6
Q ss_pred CHHHHHHHHHhCCCCEEEE-EcC---CCCHHHHHHHHHHHHHHHhhcCceEEEcC------cHHHHHhCCCCeEEeCCCC
Q 010240 319 SITDAVKAALEGGATIIQL-REK---DADTRGFLEAAKACLQICCVHGVPLLIND------RIDIALACDADGVHLGQSD 388 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~l-r~~---~~~~~~~~~~~~~~~~~~~~~~~~l~v~~------~~~~a~~~ga~gvhl~~~~ 388 (514)
+..+.....-++ +..+-+ +++ ..+.+++ ..+.+..+++++-.| .+..+..+|||.|-|-...
T Consensus 62 ~~~~iA~~y~~~-A~~IsVlTd~~~F~gs~~dL-------~~ir~~v~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi~a~ 133 (251)
T 1i4n_A 62 SLEDFIRMYDEL-ADAISILTEKHYFKGDPAFV-------RAARNLTCRPILAKDFYIDTVQVKLASSVGADAILIIARI 133 (251)
T ss_dssp CHHHHHHHHHHH-CSEEEEECCCSSSCCCTHHH-------HHHHTTCCSCEEEECCCCSTHHHHHHHHTTCSEEEEEGGG
T ss_pred CHHHHHHHHHHh-CCceEEEecccccCCCHHHH-------HHHHHhCCCCEEEeeCCCCHHHHHHHHHcCCCEEEEeccc
Confidence 455555555555 776666 222 2333332 222234466766433 2456789999999776655
Q ss_pred CCHHH----HHhhcCCCcEEEEecCCHHHHHHhhhC-CCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC--CCCEEEE
Q 010240 389 MPART----ARALLGPDKIIGVSCKTPEEAHQAWID-GANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS--KLPVVAI 461 (514)
Q Consensus 389 ~~~~~----~~~~~~~~~~ig~s~~~~~e~~~a~~~-g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~--~~pv~a~ 461 (514)
++... .......++.+.+-|||.+|+.+|.++ |+|+|++-+---.. ....++...++.+.+ ++++++.
T Consensus 134 l~~~~l~~l~~~a~~lGl~~lvEv~~~eE~~~A~~l~g~~iIGinnr~l~t-----~~~d~~~~~~l~~~ip~~~~vIaE 208 (251)
T 1i4n_A 134 LTAEQIKEIYEAAEELGMDSLVEVHSREDLEKVFSVIRPKIIGINTRDLDT-----FEIKKNVLWELLPLVPDDTVVVAE 208 (251)
T ss_dssp SCHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHTTCCCSEEEEECBCTTT-----CCBCTTHHHHHGGGSCTTSEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCCEEEEeCccccc-----CCCCHHHHHHHHHhCCCCCEEEEe
Confidence 44322 233345688999999999999999999 99999876522211 123466667777666 5799999
Q ss_pred CCCC-cccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHH
Q 010240 462 GGIG-ISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAV 505 (514)
Q Consensus 462 GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~ 505 (514)
|||+ ++++..++++ ++ +|-+|++|++++||.+.+++|...
T Consensus 209 sGI~t~edv~~~~~~-a~---avLVG~aimr~~d~~~~~~~l~~~ 249 (251)
T 1i4n_A 209 SGIKDPRELKDLRGK-VN---AVLVGTSIMKAENPRRFLEEMRAW 249 (251)
T ss_dssp SCCCCGGGHHHHTTT-CS---EEEECHHHHHCSSHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHh-CC---EEEEcHHHcCCcCHHHHHHHHHhC
Confidence 9996 9999999999 99 999999999999999999988764
No 134
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.78 E-value=1.4e-07 Score=90.63 Aligned_cols=172 Identities=14% Similarity=0.054 Sum_probs=104.7
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCH----HHHH--------------HHHHHHHHHHhh-cCceEEEc----------
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADT----RGFL--------------EAAKACLQICCV-HGVPLLIN---------- 368 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~----~~~~--------------~~~~~~~~~~~~-~~~~l~v~---------- 368 (514)
+...+.++++.++|+++|++-.+-.++ .... ...+.++++.+. .++++.+.
T Consensus 31 ~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g 110 (268)
T 1qop_A 31 EQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFNNG 110 (268)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHHhh
Confidence 457788888899999999997755432 1111 111223333334 35666542
Q ss_pred --CcHHHHHhCCCCeEEeCCCCCC--HHHHHhhcCCCc--EEEEec-CCHHHHHHhhhCCCcEEEecccc-CCCCCCCCc
Q 010240 369 --DRIDIALACDADGVHLGQSDMP--ARTARALLGPDK--IIGVSC-KTPEEAHQAWIDGANYIGCGGVY-PTNTKANNL 440 (514)
Q Consensus 369 --~~~~~a~~~ga~gvhl~~~~~~--~~~~~~~~~~~~--~ig~s~-~~~~e~~~a~~~g~d~v~~~~vf-~t~~k~~~~ 440 (514)
..++.+.++|+||+.++..... ..........+. ++-.+- .+.+.+....+.+.+++.+..+. -|.......
T Consensus 111 ~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~i~~~~~g~v~~~s~~G~tG~~~~~~ 190 (268)
T 1qop_A 111 IDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAENRGA 190 (268)
T ss_dssp HHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEEESSSSCCCSSSCC-
T ss_pred HHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhhCCCcEEEEecCCcCCCccCCC
Confidence 2345577889999999764432 111222222232 222222 34555555444444455443322 222222223
Q ss_pred cCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccCC
Q 010240 441 TVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFDR 492 (514)
Q Consensus 441 ~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~ 492 (514)
+.-.+.++++++..++||++-|||+ ++++.+++.+||+ +|.+||+|++.
T Consensus 191 ~~~~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~agAD---~vVVGSai~~~ 240 (268)
T 1qop_A 191 LPLHHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAGAA---GAISGSAIVKI 240 (268)
T ss_dssp -CCHHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTTCS---EEEECHHHHHH
T ss_pred chHHHHHHHHHhccCCcEEEECCCCCHHHHHHHHHcCCC---EEEEChHHhhh
Confidence 3346889999988899999999998 9999999999999 99999999843
No 135
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=98.76 E-value=6.8e-08 Score=89.82 Aligned_cols=189 Identities=12% Similarity=0.049 Sum_probs=113.5
Q ss_pred eEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHH----HHHHHHHHhhc-CceEEE--------cC
Q 010240 303 FLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDADTRGFLEA----AKACLQICCVH-GVPLLI--------ND 369 (514)
Q Consensus 303 ~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~----~~~~~~~~~~~-~~~l~v--------~~ 369 (514)
++++-.|.... ++..+.++++- ..++++.+-. .-+... ++.+++ .+ +.++++ +.
T Consensus 5 ~~ilalD~~~~----~~~~~~~~~~~-~~v~~~kv~~-----~~f~~~G~~~i~~l~~---~~p~~~v~lD~kl~dip~t 71 (216)
T 1q6o_A 5 MLQVALDNQTM----DSAYETTRLIA-EEVDIIEVGT-----ILCVGEGVRAVRDLKA---LYPHKIVLADAKIADAGKI 71 (216)
T ss_dssp EEEEEECCSSH----HHHHHHHHHHG-GGCSEEEECH-----HHHHHHCTHHHHHHHH---HCTTSEEEEEEEECSCHHH
T ss_pred CeEEEECCCCH----HHHHHHHHHhc-ccCCEEEECH-----HHHHHhCHHHHHHHHH---hCCCCeEEEEEEecccHHH
Confidence 55666665321 34555555553 3467776533 222222 333333 32 344442 22
Q ss_pred cHHHHHhCCCCeE--EeCCCCCCHHH-HHhhcCCCcEEEE--e-cCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCC
Q 010240 370 RIDIALACDADGV--HLGQSDMPART-ARALLGPDKIIGV--S-CKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVG 443 (514)
Q Consensus 370 ~~~~a~~~ga~gv--hl~~~~~~~~~-~~~~~~~~~~ig~--s-~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g 443 (514)
..+.+.++|||.+ |.......... .+.....+..+|+ . +.|.+......+.|.+++++.....+. .++... .
T Consensus 72 ~~~~~~~~Gad~itvh~~~g~~~l~~~~~~~~~~g~~~~~~ll~~~t~~~~~~l~~~~~~~~vl~~a~~~~-~~G~~g-~ 149 (216)
T 1q6o_A 72 LSRMCFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYWTWEQAQQWRDAGIGQVVYHRSRDAQ-AAGVAW-G 149 (216)
T ss_dssp HHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHTTCEEEEEECSCCCHHHHHHHHHTTCCEEEEECCHHHH-HTTCCC-C
T ss_pred HHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCceeeeeeCCChhhHHHHHhcCcHHHHHHHHHHHH-hcCCCC-C
Confidence 3456788999977 65443221111 2222223555543 2 223445555556688877663211111 122221 2
Q ss_pred HHHHHHHHHcC--CCCEEEECCCCcccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 444 LDGLKTVCLAS--KLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 444 ~~~l~~~~~~~--~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
++.++++++.. +.|+++.|||+++++.+++++|++ ++++||+|++++||.+.+++|++.+++.
T Consensus 150 ~~~i~~lr~~~~~~~~i~v~GGI~~~~~~~~~~aGad---~ivvG~~I~~a~dp~~~~~~~~~~i~~~ 214 (216)
T 1q6o_A 150 EADITAIKRLSDMGFKVTVTGGLALEDLPLFKGIPIH---VFIAGRSIRDAASPVEAARQFKRSIAEL 214 (216)
T ss_dssp HHHHHHHHHHHHTTCEEEEESSCCGGGGGGGTTSCCS---EEEESHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcEEEECCcChhhHHHHHHcCCC---EEEEeehhcCCCCHHHHHHHHHHHHHhh
Confidence 67777776655 688999999999999999999999 9999999999999999999999988764
No 136
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.75 E-value=9e-07 Score=82.10 Aligned_cols=180 Identities=16% Similarity=0.107 Sum_probs=117.5
Q ss_pred HHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCc-----------HHHHHh-C-CCCeEEeCCC---
Q 010240 324 VKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLINDR-----------IDIALA-C-DADGVHLGQS--- 387 (514)
Q Consensus 324 ~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~-----------~~~a~~-~-ga~gvhl~~~--- 387 (514)
.+....+|..++-+-.+..+..+- .....+.+...+.+.+++-|.. .++|.+ + |.+.|-|.--
T Consensus 36 ~~a~~asg~e~vtva~rR~~~~~~-~~~~~~~~~i~~~~~~~lpNTag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~ 114 (265)
T 1wv2_A 36 RRAIEASGAEIVTVAVRRTNIGQN-PDEPNLLDVIPPDRYTILPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQ 114 (265)
T ss_dssp HHHHHHSCCSEEEEEGGGCCC--------------CTTTSEEEEECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCT
T ss_pred HHHHHHhCCCeEEEEEEeeccccC-CCcchHHhhhhhcCCEECCcCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCc
Confidence 334446788877775543332100 0002333444455778887651 345555 3 5566655321
Q ss_pred C---CC----HHHHHhhcCCCcEEE-EecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEE
Q 010240 388 D---MP----ARTARALLGPDKIIG-VSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVV 459 (514)
Q Consensus 388 ~---~~----~~~~~~~~~~~~~ig-~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~ 459 (514)
. .+ ....+.....+..+- +.+.++..+++..+.|+++|.--+- |-.+ +.....++.++.+++..++||+
T Consensus 115 ~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~-pIGs--G~Gi~~~~lI~~I~e~~~vPVI 191 (265)
T 1wv2_A 115 KTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAG-LIGS--GLGICNPYNLRIILEEAKVPVL 191 (265)
T ss_dssp TTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHSCCSEEEECSS-STTC--CCCCSCHHHHHHHHHHCSSCBE
T ss_pred cccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEeCCc-cCCC--CCCcCCHHHHHHHHhcCCCCEE
Confidence 1 11 123344444566666 3556899999999999999944111 1111 2222468999999998899999
Q ss_pred EECCCC-cccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHHh
Q 010240 460 AIGGIG-ISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDAV 510 (514)
Q Consensus 460 a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~~ 510 (514)
+.|||. ++++..++++|++ ||.++++|+.++||.+.+++|++.+..-+
T Consensus 192 ~eGGI~TPsDAa~AmeLGAd---gVlVgSAI~~a~dP~~ma~af~~Av~aGr 240 (265)
T 1wv2_A 192 VDAGVGTASDAAIAMELGCE---AVLMNTAIAHAKDPVMMAEAMKHAIVAGR 240 (265)
T ss_dssp EESCCCSHHHHHHHHHHTCS---EEEESHHHHTSSSHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHcCCC---EEEEChHHhCCCCHHHHHHHHHHHHHHHH
Confidence 999996 8999999999999 99999999999999999999999987643
No 137
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.75 E-value=1.6e-07 Score=89.94 Aligned_cols=194 Identities=14% Similarity=0.071 Sum_probs=113.4
Q ss_pred EEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCCCH----HHHH--------------HHHHHHHHHHhhc-CceEE
Q 010240 306 AVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDADT----RGFL--------------EAAKACLQICCVH-GVPLL 366 (514)
Q Consensus 306 ~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~~~----~~~~--------------~~~~~~~~~~~~~-~~~l~ 366 (514)
.||...... +...+.++++.++|+++|++-.+-.++ .... +..+.++++.+.. +++++
T Consensus 22 ~i~~g~p~~---~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~ 98 (262)
T 2ekc_A 22 YLMVGYPDY---ETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFL 98 (262)
T ss_dssp EEETTSSCH---HHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEE
T ss_pred EecCCCCCh---HHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEE
Confidence 445544332 467788888999999999997765432 1111 1112233334445 67887
Q ss_pred EcCc------------HHHHHhCCCCeEEeCCCCCCHHHHHh------hcCCCcEEEEe-cCCHHHHHHhhhCCCcEEEe
Q 010240 367 INDR------------IDIALACDADGVHLGQSDMPARTARA------LLGPDKIIGVS-CKTPEEAHQAWIDGANYIGC 427 (514)
Q Consensus 367 v~~~------------~~~a~~~ga~gvhl~~~~~~~~~~~~------~~~~~~~ig~s-~~~~~e~~~a~~~g~d~v~~ 427 (514)
+..+ ++.+.++|++|++++. .+..+... .++...+.-.+ .++.+.+....+.+.+|+..
T Consensus 99 ~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~d--l~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a~gfiy~ 176 (262)
T 2ekc_A 99 LMTYYNPIFRIGLEKFCRLSREKGIDGFIVPD--LPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEMTYF 176 (262)
T ss_dssp EECCHHHHHHHCHHHHHHHHHHTTCCEEECTT--CCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHCSSCEEE
T ss_pred EEecCcHHHHhhHHHHHHHHHHcCCCEEEECC--CCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCCEEE
Confidence 7432 3557789999999974 33333221 12222122122 23445544444444444433
Q ss_pred cccc-CCCCCCCCc-cCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccCC--CCHHHHHHHH
Q 010240 428 GGVY-PTNTKANNL-TVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFDR--ECILPESKKL 502 (514)
Q Consensus 428 ~~vf-~t~~k~~~~-~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~--~~~~~~~~~~ 502 (514)
..+. -|......+ ..-.+.++++++..++||++-|||+ ++++.+ +..||+ ||.+||+|.+. +++.+.+++|
T Consensus 177 vs~~g~TG~~~~~~~~~~~~~v~~vr~~~~~pv~vG~GI~t~e~~~~-~~~gAD---gvIVGSai~~~~~~~~~~~~~~~ 252 (262)
T 2ekc_A 177 VSVTGTTGAREKLPYERIKKKVEEYRELCDKPVVVGFGVSKKEHARE-IGSFAD---GVVVGSALVKLAGQKKIEDLGNL 252 (262)
T ss_dssp ESSCC---------CHHHHHHHHHHHHHCCSCEEEESSCCSHHHHHH-HHTTSS---EEEECHHHHHHHHTTCHHHHHHH
T ss_pred EecCCccCCCCCcCcccHHHHHHHHHhhcCCCEEEeCCCCCHHHHHH-HHcCCC---EEEECHHHHhhhhhhhHHHHHHH
Confidence 2212 222221111 1123678888888899999999998 999999 788999 99999999965 4556677777
Q ss_pred HHHHHH
Q 010240 503 HAVLMD 508 (514)
Q Consensus 503 ~~~~~~ 508 (514)
.+.+++
T Consensus 253 ~~~~~~ 258 (262)
T 2ekc_A 253 VKELKE 258 (262)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776654
No 138
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.72 E-value=7.2e-07 Score=85.07 Aligned_cols=188 Identities=13% Similarity=0.042 Sum_probs=116.1
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCHHH----HH--------------HHHHHHHHHHhh-cCceEEEcC---------
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADTRG----FL--------------EAAKACLQICCV-HGVPLLIND--------- 369 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~----~~--------------~~~~~~~~~~~~-~~~~l~v~~--------- 369 (514)
+...+.+.++.++|+++|++-.+-.++-. .. +..+.++++.++ .++++++..
T Consensus 34 ~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g 113 (271)
T 3nav_A 34 EQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYARG 113 (271)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHh
Confidence 56888899999999999999876544211 11 112223333334 467776632
Q ss_pred ---cHHHHHhCCCCeEEeCCCCCCH----HHHHhhcCCCcEEEEecC-CHHHHHHhhhCCCcEEEeccc-cCCCCCCCCc
Q 010240 370 ---RIDIALACDADGVHLGQSDMPA----RTARALLGPDKIIGVSCK-TPEEAHQAWIDGANYIGCGGV-YPTNTKANNL 440 (514)
Q Consensus 370 ---~~~~a~~~ga~gvhl~~~~~~~----~~~~~~~~~~~~ig~s~~-~~~e~~~a~~~g~d~v~~~~v-f~t~~k~~~~ 440 (514)
..+.+.++|+||+.++.-.++. ....+..+...+.-++-. +.+.+.+..+.+.+||.+-.. -.|......+
T Consensus 114 ~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~ 193 (271)
T 3nav_A 114 IDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYLLSRAGVTGAETKAN 193 (271)
T ss_dssp HHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEEECCCC--------CC
T ss_pred HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEEEEeccCCCCcccCCc
Confidence 3566778999999997433211 112223333444344444 467788888888888876322 2333332222
Q ss_pred cCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccC-----CCCHHHHHHHHHHHHHH
Q 010240 441 TVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFD-----RECILPESKKLHAVLMD 508 (514)
Q Consensus 441 ~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~-----~~~~~~~~~~~~~~~~~ 508 (514)
..-.+.++++++..++||++-+||+ ++++.+.+..||+ ||.+||+|.+ .+++.+..+.+.+.+++
T Consensus 194 ~~~~~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~~~gAD---gvIVGSAiv~~i~~~~~~~~~~~~~~~~~~~~ 264 (271)
T 3nav_A 194 MPVHALLERLQQFDAPPALLGFGISEPAQVKQAIEAGAA---GAISGSAVVKIIETHLDNPAKQLTELANFTQA 264 (271)
T ss_dssp HHHHHHHHHHHHTTCCCEEECSSCCSHHHHHHHHHTTCS---EEEESHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCC---EEEECHHHHHHHHhhccchHHHHHHHHHHHHH
Confidence 2224678888888899999999995 9999989999999 9999999984 22444444444444443
No 139
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=98.69 E-value=1.5e-07 Score=94.74 Aligned_cols=128 Identities=20% Similarity=0.274 Sum_probs=85.2
Q ss_pred HHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHHHHHhhcCC
Q 010240 321 TDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPARTARALLGP 400 (514)
Q Consensus 321 ~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~~~~~~~~~ 400 (514)
.+.++.++++|+++|.+......+..+.+.+++ +++.+++++++
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~---ik~~~~i~Vi~--------------------------------- 189 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKE---IKSKMNIDVIV--------------------------------- 189 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHH---HHTTCCCEEEE---------------------------------
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHH---HHhcCCCeEEE---------------------------------
Confidence 366788888888888875444333333333332 23333444443
Q ss_pred CcEEEEecCCHHHHHHhhhCCCcEEEecc----ccCCCCCCCCccCCHHHHHHHHHc---CCCCEEEECCCC-cccHHHH
Q 010240 401 DKIIGVSCKTPEEAHQAWIDGANYIGCGG----VYPTNTKANNLTVGLDGLKTVCLA---SKLPVVAIGGIG-ISNASDV 472 (514)
Q Consensus 401 ~~~ig~s~~~~~e~~~a~~~g~d~v~~~~----vf~t~~k~~~~~~g~~~l~~~~~~---~~~pv~a~GGi~-~~~~~~~ 472 (514)
..+.|+++++.+.+.|+|+|.+|. +..|....+.....+..+.++++. .++||+|.|||. .+++..+
T Consensus 190 -----g~V~t~e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~ka 264 (400)
T 3ffs_A 190 -----GNVVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKA 264 (400)
T ss_dssp -----EEECSHHHHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHH
T ss_pred -----eecCCHHHHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHH
Confidence 157899999999999999998852 111111111111235666666653 489999999995 8999999
Q ss_pred HHCCCCCCceEEEeecccCC
Q 010240 473 MKIGVSNLKGVAVVSALFDR 492 (514)
Q Consensus 473 ~~~Ga~~~~gva~~~~i~~~ 492 (514)
+++||+ +|.+|++|...
T Consensus 265 lalGAd---~V~vGt~f~~t 281 (400)
T 3ffs_A 265 LAVGAS---SVMIGSILAGT 281 (400)
T ss_dssp HTTTCS---EEEECGGGTTB
T ss_pred HHcCCC---EEEEChHHhcC
Confidence 999999 99999999854
No 140
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.65 E-value=1e-06 Score=83.86 Aligned_cols=188 Identities=14% Similarity=0.057 Sum_probs=114.5
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCH----HHHH--------------HHHHHHHHHHhh-cCceEEEcC---------
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADT----RGFL--------------EAAKACLQICCV-HGVPLLIND--------- 369 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~----~~~~--------------~~~~~~~~~~~~-~~~~l~v~~--------- 369 (514)
+...+.++.+.++|+++|++-.+-.++ .-.. +..+.++++.+. .++++++..
T Consensus 32 ~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g 111 (267)
T 3vnd_A 32 ELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANG 111 (267)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhh
Confidence 567888999999999999997554331 1111 112223333333 466776633
Q ss_pred ---cHHHHHhCCCCeEEeCCCCCC--HHHHH--hhcCCCcEEEEecC-CHHHHHHhhhCCCcEEEeccccC-CCCCCCCc
Q 010240 370 ---RIDIALACDADGVHLGQSDMP--ARTAR--ALLGPDKIIGVSCK-TPEEAHQAWIDGANYIGCGGVYP-TNTKANNL 440 (514)
Q Consensus 370 ---~~~~a~~~ga~gvhl~~~~~~--~~~~~--~~~~~~~~ig~s~~-~~~e~~~a~~~g~d~v~~~~vf~-t~~k~~~~ 440 (514)
+.+.+.++|+||+.++....+ ..... +..+...+.-++-. +.+.+....+.+-+||.+-.+.. |......+
T Consensus 112 ~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~ 191 (267)
T 3vnd_A 112 IDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTYLLSRAGVTGTESKAG 191 (267)
T ss_dssp HHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEESCCCCCC-------
T ss_pred HHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEecCCCCCCccCCc
Confidence 356677899999998753321 11112 22233333333444 46677777777777877743333 33322223
Q ss_pred cCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccC-----CCCHHHHHHHHHHHHHH
Q 010240 441 TVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFD-----RECILPESKKLHAVLMD 508 (514)
Q Consensus 441 ~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~-----~~~~~~~~~~~~~~~~~ 508 (514)
..-.+.++++++..++||++-|||+ ++++.+.+..||+ |+.+||+|.+ .+++.+..+++.+.+++
T Consensus 192 ~~~~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~~~gAD---gvVVGSaiv~~i~~~~~~~~~~~~~~~~~~~~ 262 (267)
T 3vnd_A 192 EPIENILTQLAEFNAPPPLLGFGIAEPEQVRAAIKAGAA---GAISGSAVVKIIEAHQHDEATLLAKLAEFTTA 262 (267)
T ss_dssp -CHHHHHHHHHTTTCCCEEECSSCCSHHHHHHHHHTTCS---EEEECHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCC---EEEECHHHHHHHHHhccChHHHHHHHHHHHHH
Confidence 2234788999888899999999996 9999989999999 9999999984 12344444444444433
No 141
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=98.65 E-value=3.7e-08 Score=94.33 Aligned_cols=88 Identities=18% Similarity=0.137 Sum_probs=73.0
Q ss_pred HHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-----CCCEEEECCCC
Q 010240 391 ARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-----KLPVVAIGGIG 465 (514)
Q Consensus 391 ~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-----~~pv~a~GGi~ 465 (514)
+..+|+..+....++++|+|++|+.+|.+.|+|||.+.++ +++.++++++.+ ++|+.|.|||+
T Consensus 183 v~~ar~~~~~~~~I~VEV~tleea~eA~~aGaD~I~LDn~------------~~e~l~~av~~l~~~~~~v~ieASGGIt 250 (285)
T 1o4u_A 183 VQEVRKIIPFTTKIEVEVENLEDALRAVEAGADIVMLDNL------------SPEEVKDISRRIKDINPNVIVEVSGGIT 250 (285)
T ss_dssp HHHHHTTSCTTSCEEEEESSHHHHHHHHHTTCSEEEEESC------------CHHHHHHHHHHHHHHCTTSEEEEEECCC
T ss_pred HHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCCEEEECCC------------CHHHHHHHHHHhhccCCCceEEEECCCC
Confidence 4456666666678999999999999999999999999872 355566555543 78999999999
Q ss_pred cccHHHHHHCCCCCCceEEEeecccCCC
Q 010240 466 ISNASDVMKIGVSNLKGVAVVSALFDRE 493 (514)
Q Consensus 466 ~~~~~~~~~~Ga~~~~gva~~~~i~~~~ 493 (514)
++|+.++.++|++ +|++|+.+.+++
T Consensus 251 ~eni~~~a~tGVD---~IsvGslt~sa~ 275 (285)
T 1o4u_A 251 EENVSLYDFETVD---VISSSRLTLQEV 275 (285)
T ss_dssp TTTGGGGCCTTCC---EEEEGGGTSSCC
T ss_pred HHHHHHHHHcCCC---EEEEeHHHcCCC
Confidence 9999999999999 999999887543
No 142
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=98.61 E-value=2.5e-08 Score=94.42 Aligned_cols=151 Identities=21% Similarity=0.255 Sum_probs=98.0
Q ss_pred HHHHHHHhCCCCEEEEEcC------CCCHHHHHHHHHHHHHHHhhcCceEEE---------c--------CcHHHHHhCC
Q 010240 322 DAVKAALEGGATIIQLREK------DADTRGFLEAAKACLQICCVHGVPLLI---------N--------DRIDIALACD 378 (514)
Q Consensus 322 ~~~~~~~~~Gv~~v~lr~~------~~~~~~~~~~~~~~~~~~~~~~~~l~v---------~--------~~~~~a~~~g 378 (514)
+-+.++.++|++.|||..+ +++.. ..+.+ ++.. ...+.++| + ++++.+.++|
T Consensus 50 ~~a~~A~~gGAdRIELc~~l~~GGlTPS~g-~i~~a---~~~~-~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~G 124 (287)
T 3iwp_A 50 ESAVNAERGGADRIELCSGLSEGGTTPSMG-VLQVV---KQSV-QIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLYG 124 (287)
T ss_dssp HHHHHHHHHTCSEEEECBCGGGTCBCCCHH-HHHHH---HTTC-CSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCEEEECCCCCCCCCCCCHH-HHHHH---HHhc-CCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHcC
Confidence 3467788999999999976 23332 22222 2211 12223333 2 3688899999
Q ss_pred CCeEEeCC--CC--CCHHHHHhhcCCCcEEEEecC-------CHHH-HHHhhhCCCcEEEeccccCCCCCCCCccCCHHH
Q 010240 379 ADGVHLGQ--SD--MPARTARALLGPDKIIGVSCK-------TPEE-AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDG 446 (514)
Q Consensus 379 a~gvhl~~--~~--~~~~~~~~~~~~~~~ig~s~~-------~~~e-~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~ 446 (514)
||||+++. .+ .+....++.......++++.| ++.+ +....++|+|.|+.|.- ++.+ ..|++.
T Consensus 125 AdGvVfG~L~~dg~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~-----~~~a-~~Gl~~ 198 (287)
T 3iwp_A 125 ADGLVFGALTEDGHIDKELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGC-----DSSA-LEGLPL 198 (287)
T ss_dssp CSEEEECCBCTTSCBCHHHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTT-----SSST-TTTHHH
T ss_pred CCEEEEeeeCCCCCcCHHHHHHHHHHcCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCC-----CCCh-HHhHHH
Confidence 99999996 33 444444433222222466677 3444 34445669999877553 3333 468999
Q ss_pred HHHHHHcC--CCCEEEECCCCcccHHHHHH-CCCCCCceEEEe
Q 010240 447 LKTVCLAS--KLPVVAIGGIGISNASDVMK-IGVSNLKGVAVV 486 (514)
Q Consensus 447 l~~~~~~~--~~pv~a~GGi~~~~~~~~~~-~Ga~~~~gva~~ 486 (514)
|+++.+.. .++|++-|||+++|+.++++ +|++ -+=..
T Consensus 199 Lk~Lv~~a~~rI~ImaGGGV~~~Ni~~l~~~tG~~---~~H~S 238 (287)
T 3iwp_A 199 IKRLIEQAKGRIVVMPGGGITDRNLQRILEGSGAT---EFHCS 238 (287)
T ss_dssp HHHHHHHHTTSSEEEECTTCCTTTHHHHHHHHCCS---EEEEC
T ss_pred HHHHHHHhCCCCEEEECCCcCHHHHHHHHHhhCCC---EEeEC
Confidence 99998765 58999999999999999987 8988 55443
No 143
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=98.61 E-value=5.6e-08 Score=93.20 Aligned_cols=87 Identities=23% Similarity=0.296 Sum_probs=71.4
Q ss_pred HHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-----CCCEEEECCCC
Q 010240 391 ARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-----KLPVVAIGGIG 465 (514)
Q Consensus 391 ~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-----~~pv~a~GGi~ 465 (514)
...+++..+....++++|+|++|+.+|.+.|+|||.+++ .+++.++++++.+ ++|+.|.|||+
T Consensus 172 i~~~r~~~~~~~~i~vev~tlee~~~A~~aGaD~I~ld~------------~~~~~l~~~v~~l~~~~~~~~i~AsGGI~ 239 (273)
T 2b7n_A 172 LTHARKNLPFTAKIEIECESFEEAKNAMNAGADIVMCDN------------LSVLETKEIAAYRDAHYPFVLLEASGNIS 239 (273)
T ss_dssp HHHHGGGSCTTCCEEEEESSHHHHHHHHHHTCSEEEEET------------CCHHHHHHHHHHHHHHCTTCEEEEESSCC
T ss_pred HHHHHHhCCCCceEEEEcCCHHHHHHHHHcCCCEEEECC------------CCHHHHHHHHHHhhccCCCcEEEEECCCC
Confidence 345555555556789999999999999999999998865 3467777655443 49999999999
Q ss_pred cccHHHHHHCCCCCCceEEEeecccCC
Q 010240 466 ISNASDVMKIGVSNLKGVAVVSALFDR 492 (514)
Q Consensus 466 ~~~~~~~~~~Ga~~~~gva~~~~i~~~ 492 (514)
++|+.++.++|++ ++++|+.++++
T Consensus 240 ~~ni~~~~~aGaD---~i~vGs~i~~a 263 (273)
T 2b7n_A 240 LESINAYAKSGVD---AISVGALIHQA 263 (273)
T ss_dssp TTTHHHHHTTTCS---EEECTHHHHTC
T ss_pred HHHHHHHHHcCCc---EEEEcHHhcCC
Confidence 9999999999999 99999998754
No 144
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=98.57 E-value=1.2e-06 Score=83.95 Aligned_cols=192 Identities=18% Similarity=0.126 Sum_probs=108.5
Q ss_pred EEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCCCH---------------------HHHHHHHHHHHHHHhhcC
Q 010240 304 LYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDADT---------------------RGFLEAAKACLQICCVHG 362 (514)
Q Consensus 304 ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~~~---------------------~~~~~~~~~~~~~~~~~~ 362 (514)
+-.||..+... +...+.++++.++ +++|++-.+-.++ +...+.+++++ +..+
T Consensus 19 i~~i~~GdP~~---~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir---~~~~ 91 (271)
T 1ujp_A 19 IPYLTAGFPSR---EGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVR---ALTE 91 (271)
T ss_dssp EEEEETTSSCH---HHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHH---HHCC
T ss_pred EEEecCCCCCh---HHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHH---hcCC
Confidence 33456544332 4567777778788 9999997665433 22233344343 3456
Q ss_pred ceEEEcCc------------HHHHHhCCCCeEEeCCCCCCH--HHHH--hhcCCCcEEEEe-cCCHHH--HHHhhhCCCc
Q 010240 363 VPLLINDR------------IDIALACDADGVHLGQSDMPA--RTAR--ALLGPDKIIGVS-CKTPEE--AHQAWIDGAN 423 (514)
Q Consensus 363 ~~l~v~~~------------~~~a~~~ga~gvhl~~~~~~~--~~~~--~~~~~~~~ig~s-~~~~~e--~~~a~~~g~d 423 (514)
+++++..+ ++.+.++|+||+-++.-.... .... +..+...+.-.+ +.+.+. ...+...|.+
T Consensus 92 ~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~~~gfi 171 (271)
T 1ujp_A 92 KPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATGFV 171 (271)
T ss_dssp SCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTTCCSCE
T ss_pred CCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHhCCCCE
Confidence 78887443 334678899999987543221 1111 112222222222 234553 3344456666
Q ss_pred EEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHH
Q 010240 424 YIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKL 502 (514)
Q Consensus 424 ~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~ 502 (514)
|+. +..-.|......+..-.+.++++++..++||++-|||+ ++++.++ .||+ ||.+||+|.+..+..+.+++|
T Consensus 172 y~v-s~~G~TG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~--~~AD---gVIVGSAi~~~~~~~~~~~~f 245 (271)
T 1ujp_A 172 YAV-SVTGVTGMRERLPEEVKDLVRRIKARTALPVAVGFGVSGKATAAQA--AVAD---GVVVGSALVRALEEGRSLAPL 245 (271)
T ss_dssp EEE-CC------------CCHHHHHHHHTTCCSCEEEESCCCSHHHHHHH--TTSS---EEEECHHHHHHHHTTCCHHHH
T ss_pred EEE-ecCcccCCCCCCCccHHHHHHHHHhhcCCCEEEEcCCCCHHHHHHh--cCCC---EEEEChHHhcccchHHHHHHH
Confidence 664 33333443333333346788999988899999999997 9999997 9999 999999998431000134444
Q ss_pred HHHHHH
Q 010240 503 HAVLMD 508 (514)
Q Consensus 503 ~~~~~~ 508 (514)
.+.+++
T Consensus 246 v~~l~~ 251 (271)
T 1ujp_A 246 LQEIRQ 251 (271)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 145
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.55 E-value=3.6e-07 Score=95.25 Aligned_cols=130 Identities=20% Similarity=0.241 Sum_probs=91.1
Q ss_pred CHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhc-CceEEEcCcHHHHHhCCCCeEEeCCCCCCHHHHHhh
Q 010240 319 SITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVH-GVPLLINDRIDIALACDADGVHLGQSDMPARTARAL 397 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~-~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~~~~~~ 397 (514)
+..+.+++++++|++.|.+-..........+.++++++ .+ ++++++
T Consensus 229 ~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~---~~p~~~Vi~------------------------------ 275 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQ---TFPDVQVIG------------------------------ 275 (490)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHH---HCTTSEEEE------------------------------
T ss_pred chHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHH---HCCCceEEE------------------------------
Confidence 56778999999999999997666554444444443332 32 333333
Q ss_pred cCCCcEEEEecCCHHHHHHhhhCCCcEEEecc----ccCCCCCCCCccCCHHHHHHHHHc---CCCCEEEECCC-CcccH
Q 010240 398 LGPDKIIGVSCKTPEEAHQAWIDGANYIGCGG----VYPTNTKANNLTVGLDGLKTVCLA---SKLPVVAIGGI-GISNA 469 (514)
Q Consensus 398 ~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~----vf~t~~k~~~~~~g~~~l~~~~~~---~~~pv~a~GGi-~~~~~ 469 (514)
.++.|+++++.+.+.|+|+|.+|- .+.|....+.....++.+.++++. .++||+|.||| +++++
T Consensus 276 --------g~v~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di 347 (490)
T 4avf_A 276 --------GNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDL 347 (490)
T ss_dssp --------EEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHH
T ss_pred --------eeeCcHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHH
Confidence 237889999999999999998852 111111112112345666666663 47999999999 69999
Q ss_pred HHHHHCCCCCCceEEEeecccCC
Q 010240 470 SDVMKIGVSNLKGVAVVSALFDR 492 (514)
Q Consensus 470 ~~~~~~Ga~~~~gva~~~~i~~~ 492 (514)
.+++++||+ +|.+|++|...
T Consensus 348 ~kal~~GAd---~V~vGs~~~~~ 367 (490)
T 4avf_A 348 AKAMVAGAY---CVMMGSMFAGT 367 (490)
T ss_dssp HHHHHHTCS---EEEECTTTTTB
T ss_pred HHHHHcCCC---eeeecHHHhcC
Confidence 999999999 99999999854
No 146
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=98.51 E-value=2.1e-06 Score=87.55 Aligned_cols=169 Identities=16% Similarity=0.184 Sum_probs=118.8
Q ss_pred CHHHHHHHHHhCCCCEEEE-EcC---CCCHHHHHHHHHHHHHHHhhcCceEEEcC------cHHHHHhCCCCeEEeCCCC
Q 010240 319 SITDAVKAALEGGATIIQL-REK---DADTRGFLEAAKACLQICCVHGVPLLIND------RIDIALACDADGVHLGQSD 388 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~l-r~~---~~~~~~~~~~~~~~~~~~~~~~~~l~v~~------~~~~a~~~ga~gvhl~~~~ 388 (514)
+..+.... .+.|+..|-+ +++ ..+.+++ + .++ +..+.+++-.| .+..+..+|||.|-|-...
T Consensus 69 ~~~~iA~~-y~~~A~~IsvLTd~~~F~gs~~dL-~---~vr---~~v~lPvLrKDFI~d~~Qi~ea~~~GAD~ILLi~a~ 140 (452)
T 1pii_A 69 DPARIAAI-YKHYASAISVLTDEKYFQGSFNFL-P---IVS---QIAPQPILCKDFIIDPYQIYLARYYQADACLLMLSV 140 (452)
T ss_dssp CHHHHHHH-HTTTCSEEEEECCSTTTCCCTTHH-H---HHH---HHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEETTT
T ss_pred CHHHHHHH-HHhhCcEEEEEecccccCCCHHHH-H---HHH---HhcCCCeEEEeccCCHHHHHHHHHcCCCEEEEEccc
Confidence 34444444 4444777766 332 2333332 2 222 23456776443 2456789999999887766
Q ss_pred CCHHHHH----hhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC--CCCEEEEC
Q 010240 389 MPARTAR----ALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS--KLPVVAIG 462 (514)
Q Consensus 389 ~~~~~~~----~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~--~~pv~a~G 462 (514)
++...++ .....++.+.+-|||.+|+.+|.++|+|+|++-.---.. ....++...++.+.+ ++++++.|
T Consensus 141 l~~~~l~~l~~~a~~lgm~~LvEvh~~eE~~~A~~lga~iIGinnr~L~t-----~~~dl~~~~~L~~~ip~~~~vIaEs 215 (452)
T 1pii_A 141 LDDDQYRQLAAVAHSLEMGVLTEVSNEEEQERAIALGAKVVGINNRDLRD-----LSIDLNRTRELAPKLGHNVTVISES 215 (452)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHTTCSEEEEESEETTT-----TEECTHHHHHHHHHHCTTSEEEEES
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHCCCCEEEEeCCCCCC-----CCCCHHHHHHHHHhCCCCCeEEEEC
Confidence 6543222 233468888999999999999999999999775432211 123467777776655 68999999
Q ss_pred CCC-cccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHH
Q 010240 463 GIG-ISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHA 504 (514)
Q Consensus 463 Gi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~ 504 (514)
||+ ++++..++++ ++ +|-+|++||.++||.+.+++|..
T Consensus 216 GI~t~edv~~~~~~-a~---avLVGealmr~~d~~~~~~~l~~ 254 (452)
T 1pii_A 216 GINTYAQVRELSHF-AN---GFLIGSALMAHDDLHAAVRRVLL 254 (452)
T ss_dssp CCCCHHHHHHHTTT-CS---EEEECHHHHTCSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHh-CC---EEEEcHHHcCCcCHHHHHHHHHH
Confidence 997 8999999999 99 99999999999999999998873
No 147
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=98.49 E-value=1.3e-07 Score=91.60 Aligned_cols=87 Identities=21% Similarity=0.190 Sum_probs=71.2
Q ss_pred HHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-----CCCEEEECCCC
Q 010240 391 ARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-----KLPVVAIGGIG 465 (514)
Q Consensus 391 ~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-----~~pv~a~GGi~ 465 (514)
...+++..+....++++|+|++|+.+|.+.|+|||.+++ .+++.++++++.+ ++|+.|.|||+
T Consensus 187 i~~~r~~~~~~~~i~vev~tlee~~~A~~aGaD~I~ld~------------~~~~~l~~~v~~l~~~~~~~~I~ASGGIt 254 (299)
T 2jbm_A 187 VRAARQAADFALKVEVECSSLQEAVQAAEAGADLVLLDN------------FKPEELHPTATVLKAQFPSVAVEASGGIT 254 (299)
T ss_dssp HHHHHHHHTTTSCEEEEESSHHHHHHHHHTTCSEEEEES------------CCHHHHHHHHHHHHHHCTTSEEEEESSCC
T ss_pred HHHHHHhCCcCCeEEEecCCHHHHHHHHHcCCCEEEECC------------CCHHHHHHHHHHhhccCCCeeEEEECCCC
Confidence 334555555556788999999999999999999998865 3467777655443 38999999999
Q ss_pred cccHHHHHHCCCCCCceEEEeecccCC
Q 010240 466 ISNASDVMKIGVSNLKGVAVVSALFDR 492 (514)
Q Consensus 466 ~~~~~~~~~~Ga~~~~gva~~~~i~~~ 492 (514)
++|+.++.++|++ ++++|+.++++
T Consensus 255 ~~ni~~~~~aGaD---~i~vGs~i~~a 278 (299)
T 2jbm_A 255 LDNLPQFCGPHID---VISMGMLTQAA 278 (299)
T ss_dssp TTTHHHHCCTTCC---EEECTHHHHSC
T ss_pred HHHHHHHHHCCCC---EEEEChhhcCC
Confidence 9999999999999 99999988754
No 148
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=98.41 E-value=3.3e-06 Score=77.20 Aligned_cols=176 Identities=16% Similarity=0.054 Sum_probs=108.8
Q ss_pred HHHHHHHhCCCCEEEEEcCCCCHHHH-HHHHHHHHHHHhh--cCceEEEcCcH----HHHHhCCCCeEEeCCCCCCHHHH
Q 010240 322 DAVKAALEGGATIIQLREKDADTRGF-LEAAKACLQICCV--HGVPLLINDRI----DIALACDADGVHLGQSDMPARTA 394 (514)
Q Consensus 322 ~~~~~~~~~Gv~~v~lr~~~~~~~~~-~~~~~~~~~~~~~--~~~~l~v~~~~----~~a~~~ga~gvhl~~~~~~~~~~ 394 (514)
+-++.+.+.|++++=+=....+++.. .+.+++|...... ..+-+++|.+. +++..++.|.|+|... ......
T Consensus 13 eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLHG~-e~~~~~ 91 (205)
T 1nsj_A 13 EDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELPPFVFRVGVFVNEEPEKILDVASYVQLNAVQLHGE-EPIELC 91 (205)
T ss_dssp HHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHHTCSEEEECSC-CCHHHH
T ss_pred HHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEECCC-CCHHHH
Confidence 45777889999988776432333321 2333344332221 12455778774 4566789999999654 345555
Q ss_pred Hhhc-CCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCC-CccCCHHHHHHHHHcCCCCEEEECCCCcccHHHH
Q 010240 395 RALL-GPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKAN-NLTVGLDGLKTVCLASKLPVVAIGGIGISNASDV 472 (514)
Q Consensus 395 ~~~~-~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~-~~~~g~~~l~~~~~~~~~pv~a~GGi~~~~~~~~ 472 (514)
+... +...+-..++++.+++..+.+..+||+++-...+ ...+ .....|+.++.++ ..+.|++..||++++|+.++
T Consensus 92 ~~l~~~~~vika~~v~~~~~l~~~~~~~~d~~LlD~~~~--~~GGtG~~fdw~~l~~~~-~~~~p~~LAGGL~peNV~~a 168 (205)
T 1nsj_A 92 RKIAERILVIKAVGVSNERDMERALNYREFPILLDTKTP--EYGGSGKTFDWSLILPYR-DRFRYLVLSGGLNPENVRSA 168 (205)
T ss_dssp HHHHTTSEEEEEEEESSHHHHHHHGGGTTSCEEEEESCS--SSSSCCSCCCGGGTGGGG-GGSSCEEEESSCCTTTHHHH
T ss_pred HHHhcCCCEEEEEEcCCHHHHHHHHHcCCCEEEECCCCC--CCCCCCCccCHHHHHhhh-cCCCcEEEECCCCHHHHHHH
Confidence 5432 2345556677887777665555599998843222 0011 2446787776542 23789999999999999887
Q ss_pred HH-CCCCCCceEEEeecccCC---CCHHHHHHHHHHH
Q 010240 473 MK-IGVSNLKGVAVVSALFDR---ECILPESKKLHAV 505 (514)
Q Consensus 473 ~~-~Ga~~~~gva~~~~i~~~---~~~~~~~~~~~~~ 505 (514)
++ .++. ||-+.|.+-.+ .|+.+ +++|.+.
T Consensus 169 i~~~~p~---gVDvsSGvE~~pG~KD~~k-i~~fi~~ 201 (205)
T 1nsj_A 169 IDVVRPF---AVDVSSGVEAFPGKKDHDS-IKMFIKN 201 (205)
T ss_dssp HHHHCCS---EEEESGGGEEETTEECHHH-HHHHHHH
T ss_pred HHhcCCC---EEEECCceecCCCCcCHHH-HHHHHHH
Confidence 65 6999 99999999853 35443 3344433
No 149
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=98.39 E-value=1.8e-07 Score=90.41 Aligned_cols=87 Identities=24% Similarity=0.273 Sum_probs=57.6
Q ss_pred HHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC--------CCCEEEEC
Q 010240 391 ARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS--------KLPVVAIG 462 (514)
Q Consensus 391 ~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~--------~~pv~a~G 462 (514)
...+++..+....++++|+|++|+.+|.+.|+|||.++++ +++.++++++.+ ++|+.|.|
T Consensus 189 i~~~r~~~~~~~~i~vev~tlee~~~A~~aGaD~I~ld~~------------~~~~l~~~v~~l~~~~~g~~~v~I~ASG 256 (294)
T 3c2e_A 189 VKNARAVCGFAVKIEVECLSEDEATEAIEAGADVIMLDNF------------KGDGLKMCAQSLKNKWNGKKHFLLECSG 256 (294)
T ss_dssp HHHHHHHHCTTSCEEEECSSSHHHHHHHHHTCSEEECCC---------------------------------CCEEEEEC
T ss_pred HHHHHHhcCcCCeEEEecCCHHHHHHHHHcCCCEEEECCC------------CHHHHHHHHHHhcccccCCCCeEEEEEC
Confidence 3345555555567889999999999999999999987662 345555544433 28999999
Q ss_pred CCCcccHHHHHHCCCCCCceEEEeecccCC
Q 010240 463 GIGISNASDVMKIGVSNLKGVAVVSALFDR 492 (514)
Q Consensus 463 Gi~~~~~~~~~~~Ga~~~~gva~~~~i~~~ 492 (514)
||+++|+.++.++|++ ++++|+.+.++
T Consensus 257 GIt~~ni~~~~~~GvD---~i~vGs~i~~a 283 (294)
T 3c2e_A 257 GLNLDNLEEYLCDDID---IYSTSSIHQGT 283 (294)
T ss_dssp CCCC------CCCSCS---EEECGGGTSSC
T ss_pred CCCHHHHHHHHHcCCC---EEEEechhcCC
Confidence 9999999999999999 99999998754
No 150
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.39 E-value=1.9e-06 Score=90.67 Aligned_cols=119 Identities=16% Similarity=0.185 Sum_probs=83.8
Q ss_pred HHHHHhCCCCeEEeCC--CCCC-----HHHHHhhcCCCcEEE-EecCCHHHHHHhhhCCCcEEEec----cccCCCCCCC
Q 010240 371 IDIALACDADGVHLGQ--SDMP-----ARTARALLGPDKIIG-VSCKTPEEAHQAWIDGANYIGCG----GVYPTNTKAN 438 (514)
Q Consensus 371 ~~~a~~~ga~gvhl~~--~~~~-----~~~~~~~~~~~~~ig-~s~~~~~e~~~a~~~g~d~v~~~----~vf~t~~k~~ 438 (514)
.+.+.+.|+++|++.. .+.. ...+++.. ++..+. .+++|.++++.+.+.|+|+|.+| ....|....+
T Consensus 260 a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~-~~~pvi~~~v~t~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~ 338 (514)
T 1jcn_A 260 LDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKY-PHLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMA 338 (514)
T ss_dssp HHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHC-TTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSCCBTTBCCCS
T ss_pred HHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhC-CCCceEecccchHHHHHHHHHcCCCEEEECCCCCcccccccccC
Confidence 3455677888888733 3221 23344444 244444 37899999999999999999773 2233333321
Q ss_pred C---ccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccCCC
Q 010240 439 N---LTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFDRE 493 (514)
Q Consensus 439 ~---~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~~ 493 (514)
. ....+..+.++++..++||+|.|||. ++++.+++.+||+ +|++|+.|+..+
T Consensus 339 ~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kala~GAd---~V~iG~~~l~~~ 394 (514)
T 1jcn_A 339 CGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGAS---TVMMGSLLAATT 394 (514)
T ss_dssp CCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCS---EEEESTTTTTST
T ss_pred CCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHHHcCCC---eeeECHHHHcCC
Confidence 1 12235677777777799999999996 7999999999999 999999998654
No 151
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=98.38 E-value=2.5e-06 Score=81.25 Aligned_cols=149 Identities=17% Similarity=0.266 Sum_probs=103.2
Q ss_pred HHHHHHhCCCCEEE--EEcC--CCCHHHHHHHHHHHHHHHhhcCceEEEcC--cHHHHHhCCCCeEEeCCCCCCHHHHHh
Q 010240 323 AVKAALEGGATIIQ--LREK--DADTRGFLEAAKACLQICCVHGVPLLIND--RIDIALACDADGVHLGQSDMPARTARA 396 (514)
Q Consensus 323 ~~~~~~~~Gv~~v~--lr~~--~~~~~~~~~~~~~~~~~~~~~~~~l~v~~--~~~~a~~~ga~gvhl~~~~~~~~~~~~ 396 (514)
.++.+++.|++.+- ++.. +....+.++...++.+.|+++|.++++.. +... | ..+- .+.....+
T Consensus 133 sVe~AvrlGADaV~~l~~i~~Gs~~e~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~----g-g~v~---~~~dp~~V-- 202 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINLSDAGTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWV----N-GKVV---NDLSTDAV-- 202 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECTTCTTHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEE----T-TEEE---ECCSHHHH--
T ss_pred CHHHHHHCCCCEEEEEEEECCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeccccC----C-CCcC---CCCCHHHH--
Confidence 36677788988855 4444 44555666667778888999999998863 1100 0 0010 00111111
Q ss_pred hcCCCcEEEEecCCHHHHHHhhhCCCc----EEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCcc-----
Q 010240 397 LLGPDKIIGVSCKTPEEAHQAWIDGAN----YIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGIS----- 467 (514)
Q Consensus 397 ~~~~~~~ig~s~~~~~e~~~a~~~g~d----~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~~----- 467 (514)
..-++.|.++|+| ++ ++.+| +.++++.+.+.+||+.+||-..+
T Consensus 203 --------------a~aaRiAaELGADs~~tiv---K~~y~-----------e~f~~Vv~a~~vPVViaGG~k~~~~~e~ 254 (307)
T 3fok_A 203 --------------IQSVAIAAGLGNDSSYTWM---KLPVV-----------EEMERVMESTTMPTLLLGGEGGNDPDAT 254 (307)
T ss_dssp --------------HHHHHHHHTCSSCCSSEEE---EEECC-----------TTHHHHGGGCSSCEEEECCSCC--CHHH
T ss_pred --------------HHHHHHHHHhCCCcCCCEE---EeCCc-----------HHHHHHHHhCCCCEEEeCCCCCCCHHHH
Confidence 2236778899999 99 66554 34788888889999999998642
Q ss_pred --cHHHHHH-CCCCCCceEEEeecccC--CCCHHHHHHHHHHHHHHHhhh
Q 010240 468 --NASDVMK-IGVSNLKGVAVVSALFD--RECILPESKKLHAVLMDAVQR 512 (514)
Q Consensus 468 --~~~~~~~-~Ga~~~~gva~~~~i~~--~~~~~~~~~~~~~~~~~~~~~ 512 (514)
.+...++ .|+. |+++|+++|+ .+||.+.++++..+++...|.
T Consensus 255 L~~v~~A~~~aGa~---Gv~vGRNIfQ~~~~dp~~~v~al~~iVH~~~~~ 301 (307)
T 3fok_A 255 FASWEHALTLPGVR---GLTVGRTLLYPQDGDVAAAVDTAARLVHTDIQQ 301 (307)
T ss_dssp HHHHHHHTTSTTEE---EEEECTTTSSCSSSCHHHHHHHHHHHHCCCC--
T ss_pred HHHHHHHHHhCCCe---EEeechhhccCCCCCHHHHHHHHHHHHHhhHHh
Confidence 2466777 7999 9999999999 899999999999998765443
No 152
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=98.38 E-value=1.3e-06 Score=89.04 Aligned_cols=129 Identities=16% Similarity=0.169 Sum_probs=85.0
Q ss_pred CHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhc-CceEEEcCcHHHHHhCCCCeEEeCCCCCCHHHHHhh
Q 010240 319 SITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVH-GVPLLINDRIDIALACDADGVHLGQSDMPARTARAL 397 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~-~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~~~~~~ 397 (514)
+..+.++.+++.|++.+++-....++....+.++.+++ .+ +.++++
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~---~~~~~pviv------------------------------ 199 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKT---KYPNLDLIA------------------------------ 199 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHH---HCTTCEEEE------------------------------
T ss_pred hHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHH---HCCCCeEEE------------------------------
Confidence 35667788888999999883222233333333333332 22 334433
Q ss_pred cCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCC-----CCCCCCccCCHHHHHHHHH---cCCCCEEEECCCC-ccc
Q 010240 398 LGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPT-----NTKANNLTVGLDGLKTVCL---ASKLPVVAIGGIG-ISN 468 (514)
Q Consensus 398 ~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t-----~~k~~~~~~g~~~l~~~~~---~~~~pv~a~GGi~-~~~ 468 (514)
..++++++++.+.+.|+|+|.+|. .+. ....+.....++.+.++.+ ..++||++.|||. +++
T Consensus 200 --------~~v~~~~~a~~a~~~Gad~I~vg~-~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d 270 (404)
T 1eep_A 200 --------GNIVTKEAALDLISVGADCLKVGI-GPGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGD 270 (404)
T ss_dssp --------EEECSHHHHHHHHTTTCSEEEECS-SCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHH
T ss_pred --------cCCCcHHHHHHHHhcCCCEEEECC-CCCcCcCccccCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHH
Confidence 246789999999999999998842 221 1111111113455666655 4589999999996 899
Q ss_pred HHHHHHCCCCCCceEEEeecccCC
Q 010240 469 ASDVMKIGVSNLKGVAVVSALFDR 492 (514)
Q Consensus 469 ~~~~~~~Ga~~~~gva~~~~i~~~ 492 (514)
+.+++.+||+ +|.+|++|+.+
T Consensus 271 ~~~ala~GAd---~V~iG~~~l~~ 291 (404)
T 1eep_A 271 VVKAIAAGAD---SVMIGNLFAGT 291 (404)
T ss_dssp HHHHHHHTCS---EEEECHHHHTB
T ss_pred HHHHHHcCCC---HHhhCHHHhcC
Confidence 9999999999 99999999743
No 153
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.38 E-value=5.1e-06 Score=75.76 Aligned_cols=176 Identities=16% Similarity=0.073 Sum_probs=109.2
Q ss_pred HHHHHHHhCCCCEEEEEcCCCCHHHH-HHHHHHHHHHHhh--cCceEEEcCcH----HHHHhCCCCeEEeCCCCCCHHHH
Q 010240 322 DAVKAALEGGATIIQLREKDADTRGF-LEAAKACLQICCV--HGVPLLINDRI----DIALACDADGVHLGQSDMPARTA 394 (514)
Q Consensus 322 ~~~~~~~~~Gv~~v~lr~~~~~~~~~-~~~~~~~~~~~~~--~~~~l~v~~~~----~~a~~~ga~gvhl~~~~~~~~~~ 394 (514)
+-++.+.+.|++++=+=....+++.. .+.+++|...... ..+-+++|.+. +++..++.|.|+|.... .....
T Consensus 12 eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLHG~e-~~~~~ 90 (203)
T 1v5x_A 12 EDALLAEALGAFALGFVLAPGSRRRIAPEAARAIGEALGPFVVRVGVFRDQPPEEVLRLMEEARLQVAQLHGEE-PPEWA 90 (203)
T ss_dssp HHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHTTCSEEEECSCC-CHHHH
T ss_pred HHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEECCCC-CHHHH
Confidence 45777888999988776432333321 2333344332221 12456778774 45678899999996543 45555
Q ss_pred Hhhc-CCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCcccHHHHH
Q 010240 395 RALL-GPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGISNASDVM 473 (514)
Q Consensus 395 ~~~~-~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~~~~~~~~ 473 (514)
+... +...+-..++++.+++ .+....+||+++-. .+........|+.++.+. ..+.|++..||++++|+.+++
T Consensus 91 ~~l~~~~~vika~~v~~~~~l-~~~~~~~d~~LlD~----~~gGtG~~fdW~~l~~~~-~~~~p~~LAGGL~peNV~~ai 164 (203)
T 1v5x_A 91 EAVGRFYPVIKAFPLEGPARP-EWADYPAQALLLDG----KRPGSGEAYPRAWAKPLL-ATGRRVILAGGIAPENLEEVL 164 (203)
T ss_dssp HHHTTTSCEEEEEECSSSCCG-GGGGSSCSEEEEEC----SSTTSCCCCCGGGGHHHH-HTTSCEEECSSCCSTTHHHHH
T ss_pred HHhccCCCEEEEEEcCChHhh-hhhhcCCCEEEEcC----CCCCCCCccCHHHHHhhh-ccCCcEEEECCCCHHHHHHHH
Confidence 5541 1345555667665455 44445589997643 221113456888887632 246899999999999998877
Q ss_pred HCCCCCCceEEEeecccCC---CCHHHHHHHHHHHHHH
Q 010240 474 KIGVSNLKGVAVVSALFDR---ECILPESKKLHAVLMD 508 (514)
Q Consensus 474 ~~Ga~~~~gva~~~~i~~~---~~~~~~~~~~~~~~~~ 508 (514)
..++. ||-+.|.+-.+ .|+.+ +++|.+.+++
T Consensus 165 ~~~p~---gVDvsSGvE~~pG~KD~~k-i~~fi~~~r~ 198 (203)
T 1v5x_A 165 ALRPY---ALDLASGVEEAPGVKSAEK-LRALFARLAS 198 (203)
T ss_dssp HHCCS---EEEESGGGEEETTEECHHH-HHHHHHHHHH
T ss_pred hcCCC---EEEeCCceecCCCCcCHHH-HHHHHHHHHH
Confidence 77999 99999999853 35443 4455554443
No 154
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=98.36 E-value=2.2e-06 Score=84.96 Aligned_cols=129 Identities=20% Similarity=0.167 Sum_probs=83.5
Q ss_pred CHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHHHHHhhc
Q 010240 319 SITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPARTARALL 398 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~~~~~~~ 398 (514)
...+.+++++++|+++|.+...........+.+++ +++..
T Consensus 100 ~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~----------------------------------------ir~~~ 139 (361)
T 3r2g_A 100 NELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKS----------------------------------------LRQLL 139 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHH----------------------------------------HHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHH----------------------------------------HHHhc
Confidence 35678899999999999886554332222222222 22222
Q ss_pred CCCcEEEE-ecCCHHHHHHhhhCCCcEEEeccccCCCC-----CCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHH
Q 010240 399 GPDKIIGV-SCKTPEEAHQAWIDGANYIGCGGVYPTNT-----KANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASD 471 (514)
Q Consensus 399 ~~~~~ig~-s~~~~~e~~~a~~~g~d~v~~~~vf~t~~-----k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~ 471 (514)
++..+.. .+.|+++++.+.+.|+|+|.+| +.+... ..+.....++.+.++++... ||+|.|||. ++++..
T Consensus 140 -~~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg-~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~~-PVIAdGGI~~~~di~k 216 (361)
T 3r2g_A 140 -GSRCIMAGNVATYAGADYLASCGADIIKAG-IGGGSVCSTRIKTGFGVPMLTCIQDCSRADR-SIVADGGIKTSGDIVK 216 (361)
T ss_dssp -TTCEEEEEEECSHHHHHHHHHTTCSEEEEC-CSSSSCHHHHHHHCCCCCHHHHHHHHTTSSS-EEEEESCCCSHHHHHH
T ss_pred -CCCeEEEcCcCCHHHHHHHHHcCCCEEEEc-CCCCcCccccccCCccHHHHHHHHHHHHhCC-CEEEECCCCCHHHHHH
Confidence 1233333 5789999999999999999885 222110 00111112344444444333 999999995 899999
Q ss_pred HHHCCCCCCceEEEeecccCCC
Q 010240 472 VMKIGVSNLKGVAVVSALFDRE 493 (514)
Q Consensus 472 ~~~~Ga~~~~gva~~~~i~~~~ 493 (514)
++++||+ +|.+|+.|...+
T Consensus 217 ALa~GAd---~V~iGr~f~~t~ 235 (361)
T 3r2g_A 217 ALAFGAD---FVMIGGMLAGSA 235 (361)
T ss_dssp HHHTTCS---EEEESGGGTTBT
T ss_pred HHHcCCC---EEEEChHHhCCc
Confidence 9999999 999999998654
No 155
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=98.34 E-value=3e-06 Score=89.73 Aligned_cols=177 Identities=18% Similarity=0.141 Sum_probs=121.7
Q ss_pred CHHHHHHHHHhCCCCEEEEEcCCCCHH---HHHHHHHHHHHHHhhcCceEEE----cCc-------------HHHHHhCC
Q 010240 319 SITDAVKAALEGGATIIQLREKDADTR---GFLEAAKACLQICCVHGVPLLI----NDR-------------IDIALACD 378 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr~~~~~~~---~~~~~~~~~~~~~~~~~~~l~v----~~~-------------~~~a~~~g 378 (514)
+..+.+++..+.|++.+++-+-+.... ......+.+.++++...+++++ .+. ++...++|
T Consensus 281 dp~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aG 360 (555)
T 1jvn_A 281 KPVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSG 360 (555)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHHcC
Confidence 456677888889998888755333210 1111233455666667888885 333 66778899
Q ss_pred CCeEEeCCCC----------------CC-HHHHHhhcCC-CcEEEEecC-------------------------------
Q 010240 379 ADGVHLGQSD----------------MP-ARTARALLGP-DKIIGVSCK------------------------------- 409 (514)
Q Consensus 379 a~gvhl~~~~----------------~~-~~~~~~~~~~-~~~ig~s~~------------------------------- 409 (514)
|+.|-++... .. ..++.+.++. ...+++++.
T Consensus 361 ad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 440 (555)
T 1jvn_A 361 ADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCWYQ 440 (555)
T ss_dssp CSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSCCTTCCCEEEEE
T ss_pred CCEEEECCHHhhCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEccccccccccccccccccccccCCCCCcceeEE
Confidence 9999888643 11 2333333332 345566552
Q ss_pred -------------CHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHH-
Q 010240 410 -------------TPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMK- 474 (514)
Q Consensus 410 -------------~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~- 474 (514)
..+.++++.++|+|.+++..+-...+..+ ..++.++++++..++||+|.|||. ++++.++++
T Consensus 441 v~~~Gw~~~~~~~~~e~a~~~~~~Ga~~il~t~~~~dG~~~G---~d~~li~~l~~~~~iPVIasGGi~s~~d~~~~~~~ 517 (555)
T 1jvn_A 441 CTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDGSNSG---YDLELIEHVKDAVKIPVIASSGAGVPEHFEEAFLK 517 (555)
T ss_dssp EEETTTTEEEEEEHHHHHHHHHHTTCCEEEECCGGGTTTCSC---CCHHHHHHHHHHCSSCEEECSCCCSHHHHHHHHHH
T ss_pred EEEecCccCCCCCHHHHHHHHHHcCCCEEEEeCCCCCCCCCC---CCHHHHHHHHHhCCccEEEECCCCCHHHHHHHHHh
Confidence 25678899999999998876655444433 479999999998999999999995 899999998
Q ss_pred CCCCCCceEEEeecccCCCCHHHHHHH
Q 010240 475 IGVSNLKGVAVVSALFDRECILPESKK 501 (514)
Q Consensus 475 ~Ga~~~~gva~~~~i~~~~~~~~~~~~ 501 (514)
.|++ |+.++++|+..+-..+.+++
T Consensus 518 ~G~~---gvivg~a~~~~~~~~~e~~~ 541 (555)
T 1jvn_A 518 TRAD---ACLGAGMFHRGEFTVNDVKE 541 (555)
T ss_dssp SCCS---EEEESHHHHTTSCCHHHHHH
T ss_pred cCCh---HHHHHHHHHcCCCCHHHHHH
Confidence 8999 99999999976544444443
No 156
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=98.33 E-value=8.3e-07 Score=85.68 Aligned_cols=84 Identities=15% Similarity=0.118 Sum_probs=71.0
Q ss_pred HHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC--CCCEEEECCCCcccH
Q 010240 392 RTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS--KLPVVAIGGIGISNA 469 (514)
Q Consensus 392 ~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~--~~pv~a~GGi~~~~~ 469 (514)
..+++..+.. .++++|+|++|+.+|.+.|+|||.+++ .+++.++++++.+ ++|+.|.|||+++|+
T Consensus 200 ~~~r~~~~~~-kI~vev~tlee~~eA~~aGaD~I~ld~------------~~~e~l~~~v~~~~~~~~I~ASGGIt~~~i 266 (296)
T 1qap_A 200 EKAFWLHPDV-PVEVEVENLDELDDALKAGADIIMLDN------------FNTDQMREAVKRVNGQARLEVSGNVTAETL 266 (296)
T ss_dssp HHHHHHSTTS-CEEEEESSHHHHHHHHHTTCSEEEESS------------CCHHHHHHHHHTTCTTCCEEECCCSCHHHH
T ss_pred HHHHHhCCCC-cEEEEeCCHHHHHHHHHcCCCEEEECC------------CCHHHHHHHHHHhCCCCeEEEECCCCHHHH
Confidence 3455555444 788999999999999999999998865 4578888888776 689999999999999
Q ss_pred HHHHHCCCCCCceEEEeecccC
Q 010240 470 SDVMKIGVSNLKGVAVVSALFD 491 (514)
Q Consensus 470 ~~~~~~Ga~~~~gva~~~~i~~ 491 (514)
.++.++|++ ++++|+.+.+
T Consensus 267 ~~~a~~GvD---~isvGsli~~ 285 (296)
T 1qap_A 267 REFAETGVD---FISVGALTKH 285 (296)
T ss_dssp HHHHHTTCS---EEECSHHHHE
T ss_pred HHHHHcCCC---EEEEeHHHcC
Confidence 999999999 9999986653
No 157
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=98.31 E-value=3.7e-06 Score=78.90 Aligned_cols=184 Identities=14% Similarity=0.070 Sum_probs=111.2
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCHHH---HHHH-----------HHHHHHHHhhc--CceEEEcC------------
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADTRG---FLEA-----------AKACLQICCVH--GVPLLIND------------ 369 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~---~~~~-----------~~~~~~~~~~~--~~~l~v~~------------ 369 (514)
+...+.+..+.++|+++++|=.+-.++-. .++. .+.+.++.++. .+++++..
T Consensus 28 ~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~~Pivlm~Y~N~i~~~G~e~ 107 (252)
T 3tha_A 28 QTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTKKALVFMVYYNLIFSYGLEK 107 (252)
T ss_dssp HHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCSSEEEEECCHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCEEEEeccCHHHHhhHHH
Confidence 56778888888999999999777554211 1110 01222233332 25777644
Q ss_pred cHHHHHhCCCCeEEeCCCCCC----HHHHHhhcCCCcEEEEecCC-HHHHHHhhhCCCcEEEeccc-cCCCCCCCCccCC
Q 010240 370 RIDIALACDADGVHLGQSDMP----ARTARALLGPDKIIGVSCKT-PEEAHQAWIDGANYIGCGGV-YPTNTKANNLTVG 443 (514)
Q Consensus 370 ~~~~a~~~ga~gvhl~~~~~~----~~~~~~~~~~~~~ig~s~~~-~~e~~~a~~~g~d~v~~~~v-f~t~~k~~~~~~g 443 (514)
..+.+.++|++|+-++.--++ .....+..+...+.-++-.| .+.+++..+.+-+|+.+-.. --|......+..-
T Consensus 108 F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~~~~~~~~ 187 (252)
T 3tha_A 108 FVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIYLLASIGITGTKSVEEAIL 187 (252)
T ss_dssp HHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCEEEECCSCSSSCSHHHHHHH
T ss_pred HHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEEEEecCCCCCcccCCCHHH
Confidence 356778899999988764321 11122233444444344444 66677777777677654332 2222221111111
Q ss_pred HHHHHHHHHcCCCCEEEECCC-CcccHHHHHHCCCCCCceEEEeecccC---CCCHHHHHHHHHHH
Q 010240 444 LDGLKTVCLASKLPVVAIGGI-GISNASDVMKIGVSNLKGVAVVSALFD---RECILPESKKLHAV 505 (514)
Q Consensus 444 ~~~l~~~~~~~~~pv~a~GGi-~~~~~~~~~~~Ga~~~~gva~~~~i~~---~~~~~~~~~~~~~~ 505 (514)
.+.++++++..++|+++-+|| +++++.++.+ +|+ ||.+||+|.+ ..++.+..+.+.+.
T Consensus 188 ~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~~-~AD---GVIVGSAiVk~i~~~~~~~~~~~~~~~ 249 (252)
T 3tha_A 188 QDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRK-VAD---GVIVGTSIVKCFKQGNLDIIMKDIEEI 249 (252)
T ss_dssp HHHHHHHHTTCCSCEEEESSCCSHHHHHHHTT-TSS---EEEECHHHHHHTTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCcEEEEcCcCCHHHHHHHHh-cCC---EEEECHHHHHHHHhcCHHHHHHHHHHH
Confidence 357888888789999999999 5899988876 599 9999999983 33555555544443
No 158
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=98.31 E-value=2.1e-05 Score=73.09 Aligned_cols=158 Identities=18% Similarity=0.185 Sum_probs=108.0
Q ss_pred HHHHhCCCCEEEE-EcC---CCCHHHHHHHHHHHHHHHhhcCceEEEcC------cHHHHHhCCCCeEEeCCCCCCHHHH
Q 010240 325 KAALEGGATIIQL-REK---DADTRGFLEAAKACLQICCVHGVPLLIND------RIDIALACDADGVHLGQSDMPARTA 394 (514)
Q Consensus 325 ~~~~~~Gv~~v~l-r~~---~~~~~~~~~~~~~~~~~~~~~~~~l~v~~------~~~~a~~~ga~gvhl~~~~~~~~~~ 394 (514)
.+..++|+.++-+ +++ ..+.+.+ ..+.+..+.+++-.| ++..|..+|||.|-|-...+.....
T Consensus 70 A~~~~~GA~aiSVLTd~~~F~Gs~~~L-------~~vr~~v~lPvLrKDFiid~yQI~eAr~~GADaILLI~a~L~~~~l 142 (258)
T 4a29_A 70 AKFMERYAVGLSITTEEKYFNGSYETL-------RKIASSVSIPILMSDFIVKESQIDDAYNLGADTVLLIVKILTEREL 142 (258)
T ss_dssp HHHHTTTCSEEEEECCSTTTCCCHHHH-------HHHHTTCSSCEEEESCCCSHHHHHHHHHHTCSEEEEEGGGSCHHHH
T ss_pred HHHHhCCCeEEEEeCCCCCCCCCHHHH-------HHHHHhcCCCEeeccccccHHHHHHHHHcCCCeeehHHhhcCHHHH
Confidence 3566889887765 443 2343332 223344567876554 3557888999999776555543332
Q ss_pred Hh----hcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC--CCCEEEECCCC-cc
Q 010240 395 RA----LLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS--KLPVVAIGGIG-IS 467 (514)
Q Consensus 395 ~~----~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~--~~pv~a~GGi~-~~ 467 (514)
+. ....++-+-+-+||.+|+.+|.+.|++.|++-. -+-+ .-...++...++...+ ++.+++.+||. ++
T Consensus 143 ~~l~~~A~~lGl~~LvEVh~~~El~rAl~~~a~iIGINN---RnL~--tf~vdl~~t~~L~~~ip~~~~~VsESGI~t~~ 217 (258)
T 4a29_A 143 ESLLEYARSYGMEPLILINDENDLDIALRIGARFIGIMS---RDFE--TGEINKENQRKLISMIPSNVVKVAKLGISERN 217 (258)
T ss_dssp HHHHHHHHHTTCCCEEEESSHHHHHHHHHTTCSEEEECS---BCTT--TCCBCHHHHHHHHTTSCTTSEEEEEESSCCHH
T ss_pred HHHHHHHHHHhHHHHHhcchHHHHHHHhcCCCcEEEEeC---CCcc--ccccCHHHHHHHHhhCCCCCEEEEcCCCCCHH
Confidence 22 122344444569999999999999999996632 1101 1114577777787765 67899999995 89
Q ss_pred cHHHHHHCCCCCCceEEEeecccCCCCHHH
Q 010240 468 NASDVMKIGVSNLKGVAVVSALFDRECILP 497 (514)
Q Consensus 468 ~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~ 497 (514)
++..+.++|++ +|-+|++||.++||.+
T Consensus 218 dv~~l~~~G~~---a~LVGealmr~~d~~~ 244 (258)
T 4a29_A 218 EIEELRKLGVN---AFLISSSLMRNPEKIK 244 (258)
T ss_dssp HHHHHHHTTCC---EEEECHHHHHCTTHHH
T ss_pred HHHHHHHCCCC---EEEECHHHhCCCcHHH
Confidence 99999999999 9999999999888743
No 159
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.30 E-value=2.8e-06 Score=79.06 Aligned_cols=104 Identities=16% Similarity=0.097 Sum_probs=81.3
Q ss_pred CCcEEE-EecCCHHHHHHhhhCCCcEEEeccccC-CCCCCCCccCCHHHHHHHHH-cCC-CCEEEECCCC-cccHHHHHH
Q 010240 400 PDKIIG-VSCKTPEEAHQAWIDGANYIGCGGVYP-TNTKANNLTVGLDGLKTVCL-ASK-LPVVAIGGIG-ISNASDVMK 474 (514)
Q Consensus 400 ~~~~ig-~s~~~~~e~~~a~~~g~d~v~~~~vf~-t~~k~~~~~~g~~~l~~~~~-~~~-~pv~a~GGi~-~~~~~~~~~ 474 (514)
.+..+- +...|+..+++..+.|+|+|.- .-. -.+ +......+.++.+++ ..+ +||++.|||. ++++..+++
T Consensus 123 ~Gf~Vlpy~~~D~~~ak~l~~~G~~aVmP--lg~pIGs--G~Gi~~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~Ame 198 (268)
T 2htm_A 123 EDFLVLPYMGPDLVLAKRLAALGTATVMP--LAAPIGS--GWGVRTRALLELFAREKASLPPVVVDAGLGLPSHAAEVME 198 (268)
T ss_dssp TTCEECCEECSCHHHHHHHHHHTCSCBEE--BSSSTTT--CCCSTTHHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHH
T ss_pred CCCEEeeccCCCHHHHHHHHhcCCCEEEe--cCccCcC--CcccCCHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHH
Confidence 354444 3346899999999999999933 111 111 112224677899988 568 9999999996 899999999
Q ss_pred CCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHHh
Q 010240 475 IGVSNLKGVAVVSALFDRECILPESKKLHAVLMDAV 510 (514)
Q Consensus 475 ~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~~ 510 (514)
+||+ ||-++|+|+.++||.+.+++|++.+..-+
T Consensus 199 LGAd---gVlVgSAI~~a~dP~~ma~af~~Av~agr 231 (268)
T 2htm_A 199 LGLD---AVLVNTAIAEAQDPPAMAEAFRLAVEAGR 231 (268)
T ss_dssp TTCC---EEEESHHHHTSSSHHHHHHHHHHHHHHHH
T ss_pred cCCC---EEEEChHHhCCCCHHHHHHHHHHHHHHHH
Confidence 9999 99999999999999999999999988643
No 160
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=98.28 E-value=1.9e-06 Score=79.50 Aligned_cols=122 Identities=18% Similarity=0.092 Sum_probs=83.1
Q ss_pred cHHHHHhCCCCeE--EeCCCCCCHHHHHhhcCCCcEEEEecCCHH--H---------HHHhhhCCCcEEEeccccCCCCC
Q 010240 370 RIDIALACDADGV--HLGQSDMPARTARALLGPDKIIGVSCKTPE--E---------AHQAWIDGANYIGCGGVYPTNTK 436 (514)
Q Consensus 370 ~~~~a~~~ga~gv--hl~~~~~~~~~~~~~~~~~~~ig~s~~~~~--e---------~~~a~~~g~d~v~~~~vf~t~~k 436 (514)
+++.+.++|||.+ |..........+++.. +..+-.++.+.. + ++.+.+.|+|.+.+++
T Consensus 70 ~v~~~~~~Gad~vtvh~~~g~~~i~~~~~~~--gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~------- 140 (208)
T 2czd_A 70 IARKVFGAGADYVIVHTFVGRDSVMAVKELG--EIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPG------- 140 (208)
T ss_dssp HHHHHHHTTCSEEEEESTTCHHHHHHHHTTS--EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCC-------
T ss_pred HHHHHHhcCCCEEEEeccCCHHHHHHHHHhC--CcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECC-------
Confidence 3456778999965 6554432222333221 333332221111 1 4566788999995553
Q ss_pred CCCccCCHHHHHHHHHcCC-CCEEEECCCCcc--cHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHH
Q 010240 437 ANNLTVGLDGLKTVCLASK-LPVVAIGGIGIS--NASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMD 508 (514)
Q Consensus 437 ~~~~~~g~~~l~~~~~~~~-~pv~a~GGi~~~--~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~ 508 (514)
..++.++++++..+ .++++.|||+++ ++.+++++|++ ++.+||+|++++||.+.++++++.+++
T Consensus 141 -----~~~~~i~~lr~~~~~~~~iv~gGI~~~g~~~~~~~~aGad---~vvvGr~I~~a~dp~~~~~~l~~~i~~ 207 (208)
T 2czd_A 141 -----TRPERIGYIRDRLKEGIKILAPGIGAQGGKAKDAVKAGAD---YIIVGRAIYNAPNPREAAKAIYDEIRG 207 (208)
T ss_dssp -----SSTHHHHHHHHHSCTTCEEEECCCCSSTTHHHHHHHHTCS---EEEECHHHHTSSSHHHHHHHHHHHHC-
T ss_pred -----CChHHHHHHHHhCCCCeEEEECCCCCCCCCHHHHHHcCCC---EEEEChHHhcCCCHHHHHHHHHHHHhc
Confidence 13566677777664 367799999988 89999999999 999999999999999999999887643
No 161
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.26 E-value=4.8e-06 Score=86.81 Aligned_cols=131 Identities=20% Similarity=0.238 Sum_probs=88.4
Q ss_pred CHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhc-CceEEEcCcHHHHHhCCCCeEEeCCCCCCHHHHHhh
Q 010240 319 SITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVH-GVPLLINDRIDIALACDADGVHLGQSDMPARTARAL 397 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~-~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~~~~~~ 397 (514)
+..+.+++++++|++.|.+-..........+.++++++ .+ +.++++
T Consensus 231 d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~---~~p~~~Vi~------------------------------ 277 (496)
T 4fxs_A 231 GNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRA---AYPHLEIIG------------------------------ 277 (496)
T ss_dssp CCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH---HCTTCCEEE------------------------------
T ss_pred chHHHHHHHHhccCceEEeccccccchHHHHHHHHHHH---HCCCceEEE------------------------------
Confidence 45677888999999999987766554444444444433 32 333333
Q ss_pred cCCCcEEEEecCCHHHHHHhhhCCCcEEEecc----ccCCCCCCCCccCCHHHHHHHHH---cCCCCEEEECCCC-cccH
Q 010240 398 LGPDKIIGVSCKTPEEAHQAWIDGANYIGCGG----VYPTNTKANNLTVGLDGLKTVCL---ASKLPVVAIGGIG-ISNA 469 (514)
Q Consensus 398 ~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~----vf~t~~k~~~~~~g~~~l~~~~~---~~~~pv~a~GGi~-~~~~ 469 (514)
..+.++++++.+.+.|+|+|.+|- ...|....+.....+..+.++++ ..++||+|.|||. ++++
T Consensus 278 --------g~v~t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di 349 (496)
T 4fxs_A 278 --------GNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDI 349 (496)
T ss_dssp --------EEECSHHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHH
T ss_pred --------cccCcHHHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHH
Confidence 236788889999999999998741 11110000111123455666655 3479999999995 8999
Q ss_pred HHHHHCCCCCCceEEEeecccCCC
Q 010240 470 SDVMKIGVSNLKGVAVVSALFDRE 493 (514)
Q Consensus 470 ~~~~~~Ga~~~~gva~~~~i~~~~ 493 (514)
.+++++||+ +|.+|++|...+
T Consensus 350 ~kala~GAd---~V~iGs~f~~t~ 370 (496)
T 4fxs_A 350 SKAIAAGAS---CVMVGSMFAGTE 370 (496)
T ss_dssp HHHHHTTCS---EEEESTTTTTBT
T ss_pred HHHHHcCCC---eEEecHHHhcCC
Confidence 999999999 999999998543
No 162
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=98.23 E-value=8.8e-06 Score=81.47 Aligned_cols=79 Identities=9% Similarity=-0.032 Sum_probs=62.8
Q ss_pred HHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCcccHHHHHHCC-CCCCceEEEeecccCC
Q 010240 414 AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGISNASDVMKIG-VSNLKGVAVVSALFDR 492 (514)
Q Consensus 414 ~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~~~~~~~~~~G-a~~~~gva~~~~i~~~ 492 (514)
++.+.+.|+||+.++.-... .+ +...++.++++++.+++||++.|||+++++.++++.| |+ +|+++++++..
T Consensus 256 a~~l~~~G~d~i~v~~~~~~-~~---~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~a~~~l~~g~aD---~V~igR~~i~~ 328 (365)
T 2gou_A 256 AALLNKHRIVYLHIAEVDWD-DA---PDTPVSFKRALREAYQGVLIYAGRYNAEKAEQAINDGLAD---MIGFGRPFIAN 328 (365)
T ss_dssp HHHHHHTTCSEEEEECCBTT-BC---CCCCHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCS---EEECCHHHHHC
T ss_pred HHHHHHcCCCEEEEeCCCcC-CC---CCccHHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHCCCcc---eehhcHHHHhC
Confidence 66777899999988653211 11 1235788889999899999999999999999999998 99 99999999987
Q ss_pred CCHHHHH
Q 010240 493 ECILPES 499 (514)
Q Consensus 493 ~~~~~~~ 499 (514)
++....+
T Consensus 329 P~l~~~~ 335 (365)
T 2gou_A 329 PDLPERL 335 (365)
T ss_dssp TTHHHHH
T ss_pred chHHHHH
Confidence 7655444
No 163
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=98.20 E-value=9.2e-06 Score=81.29 Aligned_cols=78 Identities=12% Similarity=0.067 Sum_probs=62.8
Q ss_pred HHHhhhCCCcEEEecc-ccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCcccHHHHHHCC-CCCCceEEEeecccC
Q 010240 414 AHQAWIDGANYIGCGG-VYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGISNASDVMKIG-VSNLKGVAVVSALFD 491 (514)
Q Consensus 414 ~~~a~~~g~d~v~~~~-vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~~~~~~~~~~G-a~~~~gva~~~~i~~ 491 (514)
++.+.+.|+||+-++. .+.+ .+...++.++++++.+++||++.|||+++++.++++.| ++ +|+++++++.
T Consensus 257 a~~l~~~G~d~i~v~~~~~~~-----~~~~~~~~~~~v~~~~~iPvi~~Ggit~~~a~~~l~~g~aD---~V~~gR~~l~ 328 (364)
T 1vyr_A 257 IEELAKRGIAYLHMSETDLAG-----GKPYSEAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLID---AVAFGRDYIA 328 (364)
T ss_dssp HHHHHHTTCSEEEEECCBTTB-----CCCCCHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCS---EEEESHHHHH
T ss_pred HHHHHHhCCCEEEEecCcccC-----CCcccHHHHHHHHHHCCCCEEEECCcCHHHHHHHHHCCCcc---EEEECHHHHh
Confidence 6677789999998864 2211 11235788899999899999999999999999999998 89 9999999998
Q ss_pred CCCHHHHH
Q 010240 492 RECILPES 499 (514)
Q Consensus 492 ~~~~~~~~ 499 (514)
.++....+
T Consensus 329 ~P~~~~~~ 336 (364)
T 1vyr_A 329 NPDLVARL 336 (364)
T ss_dssp CTTHHHHH
T ss_pred ChhHHHHH
Confidence 77765544
No 164
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=98.18 E-value=1.8e-05 Score=73.78 Aligned_cols=184 Identities=15% Similarity=0.172 Sum_probs=110.5
Q ss_pred eEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEc--CCCCHHHHHHHHHHHHHHHhhcCceEEEc----CcHHHHHh
Q 010240 303 FLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLRE--KDADTRGFLEAAKACLQICCVHGVPLLIN----DRIDIALA 376 (514)
Q Consensus 303 ~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~--~~~~~~~~~~~~~~~~~~~~~~~~~l~v~----~~~~~a~~ 376 (514)
+++.|..... ..+..+.++ +.+.+++.+-. +..+. .+++++++.......+++++. +....+.+
T Consensus 4 ~v~~v~~~~~----~~~a~~~~~---~~~~dlvl~D~~~p~~~g---~~~~~~l~~~~~~~~i~vi~~~~~~~~~~~~~~ 73 (237)
T 3cwo_X 4 RVLIVDDATN----GREAVEKYK---ELKPDIVTMDITMPEMNG---IDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIK 73 (237)
T ss_dssp CEEEEECCCS----SSTTHHHHH---HHCCSCEEEECCSTTSSH---HHHHHHHHHHSSSCCEEEECCSSTHHHHHHHHH
T ss_pred EEEEEEECCC----HHHHHHHHH---hcCCCEEEEeCCCCCCCH---HHHHHHHHHhCCCCCEEEEECCCCHHHHHHHHH
Confidence 4555554332 134444443 34667665543 33333 455666666554455666652 34567788
Q ss_pred CCCCeEEeCC---CCCC-HHHHHhhcCCC-cEEEEe-------------------cCCHHH-HHHhhhCCCcEEEecccc
Q 010240 377 CDADGVHLGQ---SDMP-ARTARALLGPD-KIIGVS-------------------CKTPEE-AHQAWIDGANYIGCGGVY 431 (514)
Q Consensus 377 ~ga~gvhl~~---~~~~-~~~~~~~~~~~-~~ig~s-------------------~~~~~e-~~~a~~~g~d~v~~~~vf 431 (514)
.|+++++... .... ...+++.++.. ..+... ..++.+ +.+....|+..+++..+.
T Consensus 74 ~Ga~~~l~kp~~~~~~~l~~~i~~~~~~~~~~~~~d~~~~~~~~~v~~~~g~~~~~~~~~~~i~~~~~~~~~~vli~~~~ 153 (237)
T 3cwo_X 74 AGAKDFIVNTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSID 153 (237)
T ss_dssp TTCCEEEESHHHHHCTHHHHHHHHHHTGGGEEEEEEEEESSSCEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETT
T ss_pred CCHHheEeCCcccChHHHHHHHHHHhCCCceEEEeeecccCCcEEEEEeCCccccccCHHHHHHHHhhcCCCeEEEEecC
Confidence 9999998764 2111 22233333322 111111 124444 566667788877665554
Q ss_pred CCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEeeccc-CCCCHHHHHHHH
Q 010240 432 PTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALF-DRECILPESKKL 502 (514)
Q Consensus 432 ~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~-~~~~~~~~~~~~ 502 (514)
.+.+..+ ..++.+++++...++|+++.||++ ++++.++++.|++ |+.+|++++ ...++.+..+.+
T Consensus 154 ~~g~~~g---~~~~~i~~~~~~~~~Pvia~~g~~~~~~~~~~~~~G~~---~~~vg~a~~~~~~~~~~~~~~l 220 (237)
T 3cwo_X 154 RDGTKSG---YDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGAD---AALAASVFHFREIDVRELKEYL 220 (237)
T ss_dssp TTTCCSC---CCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHTCS---EEEESHHHHTTSSCHHHHHHHH
T ss_pred CCCcccc---ccHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCcH---HHhhhHHHHcCCCCHHHHHHHH
Confidence 4443332 347889998888899999999998 8999999999999 999999996 444555555444
No 165
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=98.16 E-value=3e-05 Score=77.20 Aligned_cols=83 Identities=16% Similarity=0.081 Sum_probs=63.6
Q ss_pred HHHhhhCCCcEEEecc--ccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCC-CcccHHHHHHCC-CCCCceEEEeecc
Q 010240 414 AHQAWIDGANYIGCGG--VYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGI-GISNASDVMKIG-VSNLKGVAVVSAL 489 (514)
Q Consensus 414 ~~~a~~~g~d~v~~~~--vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi-~~~~~~~~~~~G-a~~~~gva~~~~i 489 (514)
++...+.|+||+-++. .++....+..+...++.++++++.+++||++.||| +++++.++++.| ++ +|++++++
T Consensus 245 a~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD---~V~iGR~~ 321 (349)
T 3hgj_A 245 ARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSAD---LVLLGRVL 321 (349)
T ss_dssp HHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCS---EEEESTHH
T ss_pred HHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCce---EEEecHHH
Confidence 5666789999998752 33322222223356788899998889999999999 589999999999 88 99999999
Q ss_pred cCCCCHHHHH
Q 010240 490 FDRECILPES 499 (514)
Q Consensus 490 ~~~~~~~~~~ 499 (514)
+..++....+
T Consensus 322 lanPdl~~k~ 331 (349)
T 3hgj_A 322 LRDPYFPLRA 331 (349)
T ss_dssp HHCTTHHHHH
T ss_pred HhCchHHHHH
Confidence 9877754433
No 166
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=98.12 E-value=8e-06 Score=78.25 Aligned_cols=88 Identities=14% Similarity=0.069 Sum_probs=66.6
Q ss_pred HHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCH-HHHHHHHHc-CCCCEEEECCCCcccH
Q 010240 392 RTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGL-DGLKTVCLA-SKLPVVAIGGIGISNA 469 (514)
Q Consensus 392 ~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~-~~l~~~~~~-~~~pv~a~GGi~~~~~ 469 (514)
..+|+..+.. .+.+.|+|.+|+.+|.+.|+|+|.+.++.|. .+ +.++.+.+. .++++.|.|||+++|+
T Consensus 186 ~~ar~~~~~~-~I~Vev~t~eea~eal~aGaD~I~LDn~~~~---------~~~~~v~~l~~~~~~v~ieaSGGIt~~~i 255 (284)
T 1qpo_A 186 RAVRNAAPDL-PCEVEVDSLEQLDAVLPEKPELILLDNFAVW---------QTQTAVQRRDSRAPTVMLESSGGLSLQTA 255 (284)
T ss_dssp HHHHHHCTTS-CEEEEESSHHHHHHHGGGCCSEEEEETCCHH---------HHHHHHHHHHHHCTTCEEEEESSCCTTTH
T ss_pred HHHHHhCCCC-CEEEEeCCHHHHHHHHHcCCCEEEECCCCHH---------HHHHHHHHhhccCCCeEEEEECCCCHHHH
Confidence 3455554444 7889999999999999999999999874331 11 223333332 2689999999999999
Q ss_pred HHHHHCCCCCCceEEEeecccCC
Q 010240 470 SDVMKIGVSNLKGVAVVSALFDR 492 (514)
Q Consensus 470 ~~~~~~Ga~~~~gva~~~~i~~~ 492 (514)
.++.++|++ +|.+|+.+.++
T Consensus 256 ~~~a~tGVD---~isvG~l~~~a 275 (284)
T 1qpo_A 256 ATYAETGVD---YLAVGALTHSV 275 (284)
T ss_dssp HHHHHTTCS---EEECGGGTSSB
T ss_pred HHHHhcCCC---EEEECHHHcCC
Confidence 999999999 99988866644
No 167
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=98.05 E-value=1.2e-05 Score=76.54 Aligned_cols=82 Identities=18% Similarity=0.221 Sum_probs=67.4
Q ss_pred HHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC--CCCEEEECCCCcccHH
Q 010240 393 TARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS--KLPVVAIGGIGISNAS 470 (514)
Q Consensus 393 ~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~--~~pv~a~GGi~~~~~~ 470 (514)
.+|+. .+...+.+.|.|++|+.+|.+.|+|+|.+-. ..++.++++++.. ++++.|.|||+++|+.
T Consensus 191 ~ar~~-~~~~~IeVEv~tl~ea~eAl~aGaD~I~LDn------------~~~~~l~~av~~~~~~v~ieaSGGIt~~~i~ 257 (287)
T 3tqv_A 191 KAKKL-DSNKVVEVEVTNLDELNQAIAAKADIVMLDN------------FSGEDIDIAVSIARGKVALEVSGNIDRNSIV 257 (287)
T ss_dssp HHHHH-CTTSCEEEEESSHHHHHHHHHTTCSEEEEES------------CCHHHHHHHHHHHTTTCEEEEESSCCTTTHH
T ss_pred HHHhh-CCCCcEEEEeCCHHHHHHHHHcCCCEEEEcC------------CCHHHHHHHHHhhcCCceEEEECCCCHHHHH
Confidence 34443 4567788899999999999999999998855 3456777777654 7899999999999999
Q ss_pred HHHHCCCCCCceEEEeeccc
Q 010240 471 DVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 471 ~~~~~Ga~~~~gva~~~~i~ 490 (514)
++.++|++ .|.+|+...
T Consensus 258 ~~a~tGVD---~IsvGalt~ 274 (287)
T 3tqv_A 258 AIAKTGVD---FISVGAITK 274 (287)
T ss_dssp HHHTTTCS---EEECSHHHH
T ss_pred HHHHcCCC---EEEEChhhc
Confidence 99999999 999976543
No 168
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=98.01 E-value=1.6e-05 Score=78.02 Aligned_cols=49 Identities=24% Similarity=0.458 Sum_probs=43.5
Q ss_pred HHHHHHHHHcCCCCEEEECCC-CcccHHHHHHCCCCCCceEEEeecccCCCCH
Q 010240 444 LDGLKTVCLASKLPVVAIGGI-GISNASDVMKIGVSNLKGVAVVSALFDRECI 495 (514)
Q Consensus 444 ~~~l~~~~~~~~~pv~a~GGi-~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~ 495 (514)
++.++++++.+++||++.||| +++++.+++++||+ +|+++++++..++.
T Consensus 230 ~~~i~~i~~~~~ipvia~GGI~~~~d~~~~l~~GAd---~V~vg~~~l~~p~~ 279 (311)
T 1ep3_A 230 LKLIHQVAQDVDIPIIGMGGVANAQDVLEMYMAGAS---AVAVGTANFADPFV 279 (311)
T ss_dssp HHHHHHHHTTCSSCEEECSSCCSHHHHHHHHHHTCS---EEEECTHHHHCTTH
T ss_pred HHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCC---EEEECHHHHcCcHH
Confidence 477888888889999999999 69999999999999 99999999976554
No 169
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.01 E-value=1.4e-05 Score=83.69 Aligned_cols=118 Identities=21% Similarity=0.202 Sum_probs=79.5
Q ss_pred HHHHhCCCCeEEeCCCCC-------CHHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEecc----ccCCCCCCCCc
Q 010240 372 DIALACDADGVHLGQSDM-------PARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGG----VYPTNTKANNL 440 (514)
Q Consensus 372 ~~a~~~ga~gvhl~~~~~-------~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~----vf~t~~k~~~~ 440 (514)
+...+.|++.+.+...+. .+..+++.++.-.+++..+.|.++++.+.+.|+|+|.+|. +..|....+..
T Consensus 262 ~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g 341 (511)
T 3usb_A 262 DALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKVGIGPGSICTTRVVAGVG 341 (511)
T ss_dssp HHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCC
T ss_pred HHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHHHhCCCEEEECCCCccccccccccCCC
Confidence 345677888887755443 1234444443234555688999999999999999998742 11111111111
Q ss_pred cCCHHHHHHH---HHcCCCCEEEECCC-CcccHHHHHHCCCCCCceEEEeecccCC
Q 010240 441 TVGLDGLKTV---CLASKLPVVAIGGI-GISNASDVMKIGVSNLKGVAVVSALFDR 492 (514)
Q Consensus 441 ~~g~~~l~~~---~~~~~~pv~a~GGi-~~~~~~~~~~~Ga~~~~gva~~~~i~~~ 492 (514)
...+..+.++ ++..++||+|.||| +++++.+++++||+ +|.+|++|...
T Consensus 342 ~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GA~---~V~vGs~~~~~ 394 (511)
T 3usb_A 342 VPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAAGAH---VVMLGSMFAGV 394 (511)
T ss_dssp CCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCS---EEEESTTTTTB
T ss_pred CCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHhCch---hheecHHHhcC
Confidence 2234555554 33457999999999 58999999999999 99999999744
No 170
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=97.97 E-value=2.6e-05 Score=72.76 Aligned_cols=165 Identities=11% Similarity=0.036 Sum_probs=103.8
Q ss_pred CHHHHHHHHHhCCCCEEEEEcC-CCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCC----CCCH--
Q 010240 319 SITDAVKAALEGGATIIQLREK-DADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQS----DMPA-- 391 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr~~-~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~----~~~~-- 391 (514)
...+.++++.++|++.+++--. ..+.+...+.++++++ .++++++..+.--....|+||+-+|.- +...
T Consensus 21 ~t~~~~~~l~~~GaD~ielG~S~Gvt~~~~~~~v~~ir~----~~~Pivlm~y~~n~i~~G~dg~iiPdLp~ee~~~~~~ 96 (240)
T 1viz_A 21 LPDEQLEILCESGTDAVIIGGSDGVTEDNVLRMMSKVRR----FLVPCVLEVSAIEAIVPGFDLYFIPSVLNSKNADWIV 96 (240)
T ss_dssp CCHHHHHHHHTSCCSEEEECC----CHHHHHHHHHHHTT----SSSCEEEECSCGGGCCSCCSEEEEEEETTBSSGGGTT
T ss_pred ccHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhhC----cCCCEEEecCccccccCCCCEEEEcccCcccChhhhc
Confidence 4466788999999999999743 3445556666666653 578998755441222679999876542 1111
Q ss_pred ---HHHHhhcC-----CCcEE-EEec----------------CCHHHHHHhhhCCC----cEEEeccccCCCCCCCCccC
Q 010240 392 ---RTARALLG-----PDKII-GVSC----------------KTPEEAHQAWIDGA----NYIGCGGVYPTNTKANNLTV 442 (514)
Q Consensus 392 ---~~~~~~~~-----~~~~i-g~s~----------------~~~~e~~~a~~~g~----d~v~~~~vf~t~~k~~~~~~ 442 (514)
....+.++ ...+. |... .+++.+....+.|. .+|-+-. .+. ..
T Consensus 97 g~~~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~d~~~~~~~~~~~a~~g~~~~~~~VYl~s-------~G~-~~ 168 (240)
T 1viz_A 97 GMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFYLEY-------SGV-LG 168 (240)
T ss_dssp HHHHHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEEEEC-------TTS-CC
T ss_pred chhHHHHHHcCCCCcceeeeecccEEECCCCceEEeeccCCCCCHHHHHHHHHhCcccCCCEEEEeC-------CCc-cC
Confidence 12222222 23333 1111 23566666555542 4442211 111 23
Q ss_pred CHHHHHHHHHcC-CCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHH
Q 010240 443 GLDGLKTVCLAS-KLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFDRECILPESKK 501 (514)
Q Consensus 443 g~~~l~~~~~~~-~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~ 501 (514)
..+.++++++.. ++|+++-|||+ ++++.++++ ||+ +|.+||++.+ +|.+.+++
T Consensus 169 ~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-gAd---~VIVGSa~v~--~~~~~~~~ 223 (240)
T 1viz_A 169 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-HAD---VIVVGNAVYE--DFDRALKT 223 (240)
T ss_dssp CHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-TCS---EEEECTHHHH--CHHHHHTH
T ss_pred hHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-CCC---EEEEChHHHh--CHHHHHHH
Confidence 688999999998 99999999997 799999998 999 9999999995 34434444
No 171
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.91 E-value=5.3e-05 Score=79.28 Aligned_cols=129 Identities=18% Similarity=0.210 Sum_probs=84.5
Q ss_pred CHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhc-CceEEEcCcHHHHHhCCCCeEEeCCCCCCHHHHHhh
Q 010240 319 SITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVH-GVPLLINDRIDIALACDADGVHLGQSDMPARTARAL 397 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~-~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~~~~~~ 397 (514)
+..+.++.++++|++.+++-..........+.++++++ .+ +.++++
T Consensus 237 ~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~---~~p~~pvi~------------------------------ 283 (494)
T 1vrd_A 237 ETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKA---DYPDLPVVA------------------------------ 283 (494)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHH---HCTTSCEEE------------------------------
T ss_pred hHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHH---HCCCceEEe------------------------------
Confidence 46778889999999999985544443334444444433 22 233322
Q ss_pred cCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCC----CCCCccCCHHHHHHHHH---cCCCCEEEECCC-CcccH
Q 010240 398 LGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNT----KANNLTVGLDGLKTVCL---ASKLPVVAIGGI-GISNA 469 (514)
Q Consensus 398 ~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~----k~~~~~~g~~~l~~~~~---~~~~pv~a~GGi-~~~~~ 469 (514)
-.+.++++++.+.+.|+|+|.+|.-.-+.+ ..+.....+..+.++.+ ..++||+|.||| +++++
T Consensus 284 --------g~~~t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di 355 (494)
T 1vrd_A 284 --------GNVATPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDI 355 (494)
T ss_dssp --------EEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHH
T ss_pred --------CCcCCHHHHHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHH
Confidence 236788899999999999998853110000 00000112344444443 358999999999 58999
Q ss_pred HHHHHCCCCCCceEEEeecccC
Q 010240 470 SDVMKIGVSNLKGVAVVSALFD 491 (514)
Q Consensus 470 ~~~~~~Ga~~~~gva~~~~i~~ 491 (514)
.+++++||+ +|.+|++|+.
T Consensus 356 ~kala~GAd---~V~iGr~~l~ 374 (494)
T 1vrd_A 356 VKALAAGAE---SVMVGSIFAG 374 (494)
T ss_dssp HHHHHTTCS---EEEESHHHHT
T ss_pred HHHHHcCCC---EEEECHHHhc
Confidence 999999999 9999999963
No 172
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=97.91 E-value=0.0001 Score=73.80 Aligned_cols=84 Identities=15% Similarity=0.038 Sum_probs=63.2
Q ss_pred HHHhhhCCCcEEEecc--ccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCC-CcccHHHHHHCC-CCCCceEEEeecc
Q 010240 414 AHQAWIDGANYIGCGG--VYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGI-GISNASDVMKIG-VSNLKGVAVVSAL 489 (514)
Q Consensus 414 ~~~a~~~g~d~v~~~~--vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi-~~~~~~~~~~~G-a~~~~gva~~~~i 489 (514)
++...+.|+||+-++. ..+....+..+...++.++++++.+++||++.||| +++++.++++.| ++ .|++++++
T Consensus 252 a~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD---~V~iGR~~ 328 (363)
T 3l5l_A 252 ARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQLD---LVSVGRAH 328 (363)
T ss_dssp HHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCS---EEECCHHH
T ss_pred HHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCcc---EEEecHHH
Confidence 5666789999997753 22222222223345788888888889999999999 499999999999 89 99999999
Q ss_pred cCCCCHHHHHH
Q 010240 490 FDRECILPESK 500 (514)
Q Consensus 490 ~~~~~~~~~~~ 500 (514)
+..++....++
T Consensus 329 lanPdl~~k~~ 339 (363)
T 3l5l_A 329 LADPHWAYFAA 339 (363)
T ss_dssp HHCTTHHHHHH
T ss_pred HhCchHHHHHH
Confidence 98777544443
No 173
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=97.89 E-value=0.00012 Score=69.62 Aligned_cols=158 Identities=12% Similarity=0.021 Sum_probs=101.8
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEc-----CcHHHHHhCCCCeEEeCCCCCC--
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLIN-----DRIDIALACDADGVHLGQSDMP-- 390 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~-----~~~~~a~~~ga~gvhl~~~~~~-- 390 (514)
.+..+.++...+.|++.+++=+=+.... +. +.++++....++.+. .+++... .||+.|.+++..+.
T Consensus 38 ~dp~~~A~~~~~~Ga~~l~vvDL~~~n~---~~---i~~i~~~~~~pv~vgGGir~~~~~~~l-~Ga~~Viigs~a~~~~ 110 (260)
T 2agk_A 38 HPSSYYAKLYKDRDVQGCHVIKLGPNND---DA---AREALQESPQFLQVGGGINDTNCLEWL-KWASKVIVTSWLFTKE 110 (260)
T ss_dssp CCHHHHHHHHHHTTCTTCEEEEESSSCH---HH---HHHHHHHSTTTSEEESSCCTTTHHHHT-TTCSCEEECGGGBCTT
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCCCCH---HH---HHHHHhcCCceEEEeCCCCHHHHHHHh-cCCCEEEECcHHHhhc
Confidence 3456778888889988887744332111 22 233344445555542 2566667 89999999876332
Q ss_pred ----HH---HHHhhcC-CCcEEEEecC--------------------C-H-HHHHHhhhCCCcEEEeccccCCCCCCCCc
Q 010240 391 ----AR---TARALLG-PDKIIGVSCK--------------------T-P-EEAHQAWIDGANYIGCGGVYPTNTKANNL 440 (514)
Q Consensus 391 ----~~---~~~~~~~-~~~~ig~s~~--------------------~-~-~e~~~a~~~g~d~v~~~~vf~t~~k~~~~ 440 (514)
+. ++-+.++ ....++++|. + . +-+..+.+. ++.+++..+-...+..
T Consensus 111 g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a~~~~~~-a~~il~t~i~~dG~~~--- 186 (260)
T 2agk_A 111 GHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFRELRKY-TNEFLIHAADVEGLCG--- 186 (260)
T ss_dssp CCBCHHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHHHHHTTT-CSEEEEEC-------C---
T ss_pred CCCCHHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHHHHHHHHh-cCEEEEEeeccccCcC---
Confidence 22 2222233 3344555443 1 2 446666777 9999886655444432
Q ss_pred cCCHHHHHHHHHcC----CCCEEEECCCC-cccHHHHHHC--CCCCCceEEEeecc
Q 010240 441 TVGLDGLKTVCLAS----KLPVVAIGGIG-ISNASDVMKI--GVSNLKGVAVVSAL 489 (514)
Q Consensus 441 ~~g~~~l~~~~~~~----~~pv~a~GGi~-~~~~~~~~~~--Ga~~~~gva~~~~i 489 (514)
...++.++++++.+ ++||+|.|||. ++++.++++. |++ ++.+++++
T Consensus 187 G~d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~---gvivg~al 239 (260)
T 2agk_A 187 GIDELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKV---DLTFGSSL 239 (260)
T ss_dssp CCCHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCE---EEECCTTB
T ss_pred CCCHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCC---EEEeeCCH
Confidence 34799999999988 99999999996 8999999988 999 99999996
No 174
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.88 E-value=0.00029 Score=76.58 Aligned_cols=103 Identities=23% Similarity=0.190 Sum_probs=73.1
Q ss_pred HHhhcCCCcEEEE--ec-------CCHHH----HHHhhhCCCcEEEec-----cccCCCCCCCCccCCHHHHHHHHHcCC
Q 010240 394 ARALLGPDKIIGV--SC-------KTPEE----AHQAWIDGANYIGCG-----GVYPTNTKANNLTVGLDGLKTVCLASK 455 (514)
Q Consensus 394 ~~~~~~~~~~ig~--s~-------~~~~e----~~~a~~~g~d~v~~~-----~vf~t~~k~~~~~~g~~~l~~~~~~~~ 455 (514)
+|+..+++..+++ |. .+.++ ++.+.+.|+||+.++ +.+|+.++...+...++.++++++.++
T Consensus 201 vr~~vG~~~~v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 280 (671)
T 1ps9_A 201 VRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVS 280 (671)
T ss_dssp HHHHHCSSSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCS
T ss_pred HHHHcCCCceEEEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcC
Confidence 4555666766653 21 23443 556668899999875 333433222222335688888888889
Q ss_pred CCEEEECCC-CcccHHHHHHCC-CCCCceEEEeecccCCCCHHHHH
Q 010240 456 LPVVAIGGI-GISNASDVMKIG-VSNLKGVAVVSALFDRECILPES 499 (514)
Q Consensus 456 ~pv~a~GGi-~~~~~~~~~~~G-a~~~~gva~~~~i~~~~~~~~~~ 499 (514)
+||++.||| +++++.++++.| ++ +|+++++++.+++....+
T Consensus 281 iPvi~~Ggi~~~~~a~~~l~~g~aD---~V~~gR~~l~~P~l~~k~ 323 (671)
T 1ps9_A 281 LPLVTTNRINDPQVADDILSRGDAD---MVSMARPFLADAELLSKA 323 (671)
T ss_dssp SCEEECSSCCSHHHHHHHHHTTSCS---EEEESTHHHHCTTHHHHH
T ss_pred ceEEEeCCCCCHHHHHHHHHcCCCC---EEEeCHHHHhCcHHHHHH
Confidence 999999999 799999999998 88 999999999877765444
No 175
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=97.85 E-value=0.00011 Score=67.77 Aligned_cols=136 Identities=14% Similarity=0.120 Sum_probs=99.6
Q ss_pred HHHHHhCCCCeEEeCCCC--CCHH----HHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCH
Q 010240 371 IDIALACDADGVHLGQSD--MPAR----TARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGL 444 (514)
Q Consensus 371 ~~~a~~~ga~gvhl~~~~--~~~~----~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~ 444 (514)
+..+.++||+.|-++... .... .....+..++.+-+-+|+..|...+...+.++|.+=|+..-.|.........
T Consensus 78 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVge~~e~~~~~~~~~~iIayep~waiGtG~~v~t~~~ 157 (226)
T 1w0m_A 78 LENIKEAGGSGVILNHSEAPLKLNDLARLVAKAKSLGLDVVVCAPDPRTSLAAAALGPHAVAVEPPELIGTGRAVSRYKP 157 (226)
T ss_dssp HHHHHHHTCCEEEECCTTSCCBHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTCCSEEEECCGGGTTTSCCHHHHCH
T ss_pred HHHHHHcCCCEEEEeeeeccCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCEEEEcChhhhccCCCCCCCCh
Confidence 778889999999888866 3332 2334455788888889999999888889999998877775433200011223
Q ss_pred HHHHHHH----HcC-CCCEEEECCCCcccH-HHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 445 DGLKTVC----LAS-KLPVVAIGGIGISNA-SDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 445 ~~l~~~~----~~~-~~pv~a~GGi~~~~~-~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
+.+++.. ... +++++.-|||++.|. ..+.+.|++ |+-+|+++++++|+.+.++++.+.+.+.
T Consensus 158 d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~giD---G~LVG~a~l~a~~~~~~i~~l~~~~~~~ 225 (226)
T 1w0m_A 158 EAIVETVGLVSRHFPEVSVITGAGIESGDDVAAALRLGTR---GVLLASAAVKAKDPYAKIVELAKPLSEL 225 (226)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCS---EEEECHHHHTCSSHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCC---EEEECHHHHCCcCHHHHHHHHHHHHHhc
Confidence 4333332 222 689999999996655 556678888 9999999999999999999999888763
No 176
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=97.84 E-value=4.9e-05 Score=76.27 Aligned_cols=161 Identities=16% Similarity=0.143 Sum_probs=95.8
Q ss_pred CHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEE------cCcHH-HHHhCCCCeE-Ee---CCC
Q 010240 319 SITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLI------NDRID-IALACDADGV-HL---GQS 387 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v------~~~~~-~a~~~ga~gv-hl---~~~ 387 (514)
...+.++++.++|++.+.+....+..... ..++...+..++.+ .+..+ .....|++.. ++ ...
T Consensus 137 ~~~~~~~~a~~~G~~ai~it~d~p~~g~r------~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~ 210 (370)
T 1gox_A 137 VVAQLVRRAERAGFKAIALTVDTPRLGRR------EADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDR 210 (370)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCSSCCCC------HHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCT
T ss_pred HHHHHHHHHHHCCCCEEEEeCCCCccccc------HHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCc
Confidence 34677888888999999998875433211 11122222222111 11000 0011222210 00 011
Q ss_pred CCC---HHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC--CCCEEEEC
Q 010240 388 DMP---ARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS--KLPVVAIG 462 (514)
Q Consensus 388 ~~~---~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~--~~pv~a~G 462 (514)
... +..+++..+...++ -.+++++++..+.+.|+|+|.++.-.. .... .....++.+.++++.+ ++||++.|
T Consensus 211 ~~~~~~i~~l~~~~~~pv~v-K~~~~~e~a~~a~~~Gad~I~vs~~gg-r~~~-~~~~~~~~l~~v~~~~~~~ipvia~G 287 (370)
T 1gox_A 211 SLSWKDVAWLQTITSLPILV-KGVITAEDARLAVQHGAAGIIVSNHGA-RQLD-YVPATIMALEEVVKAAQGRIPVFLDG 287 (370)
T ss_dssp TCCHHHHHHHHHHCCSCEEE-ECCCSHHHHHHHHHTTCSEEEECCGGG-TSST-TCCCHHHHHHHHHHHTTTSSCEEEES
T ss_pred cchHHHHHHHHHHhCCCEEE-EecCCHHHHHHHHHcCCCEEEECCCCC-ccCC-CcccHHHHHHHHHHHhCCCCEEEEEC
Confidence 212 33445554444443 246899999999999999998865321 1111 1123567888888877 79999999
Q ss_pred CCC-cccHHHHHHCCCCCCceEEEeecccC
Q 010240 463 GIG-ISNASDVMKIGVSNLKGVAVVSALFD 491 (514)
Q Consensus 463 Gi~-~~~~~~~~~~Ga~~~~gva~~~~i~~ 491 (514)
||. .+++.+++.+||+ +|.+|+.++.
T Consensus 288 GI~~~~D~~k~l~~GAd---aV~iGr~~l~ 314 (370)
T 1gox_A 288 GVRRGTDVFKALALGAA---GVFIGRPVVF 314 (370)
T ss_dssp SCCSHHHHHHHHHHTCS---EEEECHHHHH
T ss_pred CCCCHHHHHHHHHcCCC---EEeecHHHHH
Confidence 995 7799999999999 9999999884
No 177
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=97.83 E-value=4.9e-05 Score=76.32 Aligned_cols=79 Identities=10% Similarity=-0.026 Sum_probs=60.8
Q ss_pred HHHhhhCCCcEEEeccc-cCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCcccHHHHHHCC-CCCCceEEEeecccC
Q 010240 414 AHQAWIDGANYIGCGGV-YPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGISNASDVMKIG-VSNLKGVAVVSALFD 491 (514)
Q Consensus 414 ~~~a~~~g~d~v~~~~v-f~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~~~~~~~~~~G-a~~~~gva~~~~i~~ 491 (514)
++.+.+.|+||+-++.- +.+ ..+. ..++.++++++.+++||++.|||+++++.++++.| ++ +|+++++++.
T Consensus 261 a~~le~~Gvd~i~v~~~~~~~-~~~~---~~~~~~~~ik~~~~iPvi~~Ggi~~~~a~~~l~~g~aD---~V~igR~~l~ 333 (377)
T 2r14_A 261 AGELDRRGLAYLHFNEPDWIG-GDIT---YPEGFREQMRQRFKGGLIYCGNYDAGRAQARLDDNTAD---AVAFGRPFIA 333 (377)
T ss_dssp HHHHHHTTCSEEEEECCC-------C---CCTTHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCS---EEEESHHHHH
T ss_pred HHHHHHcCCCEEEEeCCcccC-CCCc---chHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCce---EEeecHHHHh
Confidence 56677899999987542 211 1111 15778888998899999999999999999999998 89 9999999998
Q ss_pred CCCHHHHH
Q 010240 492 RECILPES 499 (514)
Q Consensus 492 ~~~~~~~~ 499 (514)
.++....+
T Consensus 334 ~P~l~~k~ 341 (377)
T 2r14_A 334 NPDLPERF 341 (377)
T ss_dssp CTTHHHHH
T ss_pred CchHHHHH
Confidence 77765544
No 178
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=97.83 E-value=5.4e-06 Score=77.05 Aligned_cols=157 Identities=13% Similarity=0.083 Sum_probs=101.6
Q ss_pred CHHHHHHHHHhCCCCEEEEEc-CCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCC---CC-CCHH-
Q 010240 319 SITDAVKAALEGGATIIQLRE-KDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQ---SD-MPAR- 392 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr~-~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~---~~-~~~~- 392 (514)
...+.++++.++|++.|++=. ...+.+...++++++++ .++++++..+..-....|+||+-+|. .. ....
T Consensus 21 ~t~~~~~~l~~~GaD~IelG~S~g~t~~~~~~~v~~ir~----~~~Pivl~~y~~n~i~~gvDg~iipdLp~ee~~~~~~ 96 (234)
T 2f6u_A 21 NTDEIIKAVADSGTDAVMISGTQNVTYEKARTLIEKVSQ----YGLPIVVEPSDPSNVVYDVDYLFVPTVLNSADGDWIT 96 (234)
T ss_dssp CCHHHHHHHHTTTCSEEEECCCTTCCHHHHHHHHHHHTT----SCCCEEECCSSCCCCCCCSSEEEEEEETTBSBGGGTT
T ss_pred ccHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhcC----CCCCEEEecCCcchhhcCCCEEEEcccCCCCCHHHHh
Confidence 346678899999999999964 34456666676666653 57898886654112267999997654 21 1111
Q ss_pred ----HHH-------hhcC-----CCcEEE----Eec-------------CCHHHHHHhhhCCC-----cEEEeccccCCC
Q 010240 393 ----TAR-------ALLG-----PDKIIG----VSC-------------KTPEEAHQAWIDGA-----NYIGCGGVYPTN 434 (514)
Q Consensus 393 ----~~~-------~~~~-----~~~~ig----~s~-------------~~~~e~~~a~~~g~-----d~v~~~~vf~t~ 434 (514)
... +.++ ...+.- .+- .+++.++.-.+.|. .+|.+-.
T Consensus 97 g~~~~~~~~~~~~~~~~g~~~~~l~~I~~gYil~~P~~~~~rl~~g~~~~~~e~~~~~a~~g~~~l~~~~Vyl~~----- 171 (234)
T 2f6u_A 97 GKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVLNPDSAVARVTKALCNIDKELAASYALVGEKLFNLPIIYIEY----- 171 (234)
T ss_dssp HHHHHHHHTTGGGHHHHHHHHHSTTEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCCSEEEEEC-----
T ss_pred hhHHHHHHhhhhhHHHcCCcccceeeeecceEEECCCCceEEeecCCCCCCHHHHHHHHHhhhhhcCCCEEEEeC-----
Confidence 111 1122 223321 100 15555555555555 5554322
Q ss_pred CCCCCccCCHHHHHHHHHcC-CCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccC
Q 010240 435 TKANNLTVGLDGLKTVCLAS-KLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFD 491 (514)
Q Consensus 435 ~k~~~~~~g~~~l~~~~~~~-~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~ 491 (514)
+ + .....+.++++++.. ++|+++-|||+ ++++.++++ ||+ +|.+||++.+
T Consensus 172 ~--G-~~~~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-gAd---~VIVGSa~v~ 223 (234)
T 2f6u_A 172 S--G-TYGNPELVAEVKKVLDKARLFYGGGIDSREKAREMLR-YAD---TIIVGNVIYE 223 (234)
T ss_dssp T--T-SCCCHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-HSS---EEEECHHHHH
T ss_pred C--C-CcchHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-CCC---EEEEChHHHh
Confidence 1 1 123688999999998 99999999997 799999999 999 9999999884
No 179
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=97.81 E-value=4.6e-05 Score=72.88 Aligned_cols=84 Identities=17% Similarity=0.235 Sum_probs=66.4
Q ss_pred HHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC--CCCEEEECCCCcccHH
Q 010240 393 TARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS--KLPVVAIGGIGISNAS 470 (514)
Q Consensus 393 ~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~--~~pv~a~GGi~~~~~~ 470 (514)
.+++.. +...+.+.|.|.+|+.+|.+.|+|+|.+-. ..++.+++..+.. ++++.|.|||+++|+.
T Consensus 202 ~~r~~~-p~~~ieVEvdtlde~~eAl~aGaD~I~LDn------------~~~~~l~~av~~i~~~v~ieaSGGI~~~~i~ 268 (298)
T 3gnn_A 202 AAFALN-AEVPVQIEVETLDQLRTALAHGARSVLLDN------------FTLDMMRDAVRVTEGRAVLEVSGGVNFDTVR 268 (298)
T ss_dssp HHHHHC---CCCEEEESSHHHHHHHHHTTCEEEEEES------------CCHHHHHHHHHHHTTSEEEEEESSCSTTTHH
T ss_pred HHHHhC-CCCCEEEEeCCHHHHHHHHHcCCCEEEECC------------CCHHHHHHHHHHhCCCCeEEEEcCCCHHHHH
Confidence 344443 345677889999999999999999997755 3456777766643 6889999999999999
Q ss_pred HHHHCCCCCCceEEEeecccCC
Q 010240 471 DVMKIGVSNLKGVAVVSALFDR 492 (514)
Q Consensus 471 ~~~~~Ga~~~~gva~~~~i~~~ 492 (514)
++.++|++ +|.+|+...++
T Consensus 269 ~~a~tGVD---~isvG~lt~sa 287 (298)
T 3gnn_A 269 AIAETGVD---RISIGALTKDV 287 (298)
T ss_dssp HHHHTTCS---EEECGGGGTSC
T ss_pred HHHHcCCC---EEEECCeecCC
Confidence 99999999 99999866543
No 180
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=97.78 E-value=4.9e-05 Score=76.45 Aligned_cols=93 Identities=15% Similarity=0.121 Sum_probs=69.7
Q ss_pred HHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHH
Q 010240 393 TARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASD 471 (514)
Q Consensus 393 ~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~ 471 (514)
.+++..+...++. .+.++++++.+.+.|+|.|.++.-..++.. .....++.+.++++.++.||++.|||. .+++.+
T Consensus 219 ~i~~~~~~Pv~vk-gv~t~e~a~~a~~aGad~I~vs~~gg~~~d--~~~~~~~~l~~v~~~~~~pVia~GGI~~~~dv~k 295 (380)
T 1p4c_A 219 WLRDLWPHKLLVK-GLLSAEDADRCIAEGADGVILSNHGGRQLD--CAISPMEVLAQSVAKTGKPVLIDSGFRRGSDIVK 295 (380)
T ss_dssp HHHHHCCSEEEEE-EECCHHHHHHHHHTTCSEEEECCGGGTSCT--TCCCGGGTHHHHHHHHCSCEEECSSCCSHHHHHH
T ss_pred HHHHhcCCCEEEE-ecCcHHHHHHHHHcCCCEEEEcCCCCCcCC--CCcCHHHHHHHHHHHcCCeEEEECCCCCHHHHHH
Confidence 3444444344433 468999999999999999999643332211 112357888888887788999999995 779999
Q ss_pred HHHCCCCCCceEEEeecccC
Q 010240 472 VMKIGVSNLKGVAVVSALFD 491 (514)
Q Consensus 472 ~~~~Ga~~~~gva~~~~i~~ 491 (514)
++.+||+ +|.+|++++.
T Consensus 296 al~~GAd---aV~iGr~~l~ 312 (380)
T 1p4c_A 296 ALALGAE---AVLLGRATLY 312 (380)
T ss_dssp HHHTTCS---CEEESHHHHH
T ss_pred HHHhCCc---HhhehHHHHH
Confidence 9999999 9999999873
No 181
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=97.75 E-value=0.00087 Score=64.42 Aligned_cols=182 Identities=13% Similarity=0.122 Sum_probs=108.2
Q ss_pred CCCceEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHH-HHHHHHHhhcCceEEE----cC---c
Q 010240 299 PSDLFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDADTRGFLEAA-KACLQICCVHGVPLLI----ND---R 370 (514)
Q Consensus 299 ~~~~~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~-~~~~~~~~~~~~~l~v----~~---~ 370 (514)
.+..+|++-.|.... ++..+.++++ ...+.++.+- ..-+.... ..+..+.+.++..++. +| .
T Consensus 22 ~k~~~LiVALD~~~~----~eal~l~~~l-~~~v~~vKVG-----~~lf~~~G~~~V~~Lk~~~g~~IflDlKl~DIpnT 91 (303)
T 3ru6_A 22 SNAMKLCVALDLSTK----EECLQLAKEL-KNLDIWLKVG-----LRAYLRDGFKFIEELKKVDDFKIFLDLKFHDIPNT 91 (303)
T ss_dssp --CCEEEEECCCSSH----HHHHHHHHHT-TTSSCEEEEC-----HHHHHHHTHHHHHHHHHHCCCEEEEEEEECSCHHH
T ss_pred hcCCCEEEEeCCCCH----HHHHHHHHHh-CCCccEEEeC-----HHHHHHhCHHHHHHHHHhhCCCEEEEeeeccCchh
Confidence 345677776675421 3455555543 4557888772 22223221 2233333334666654 22 1
Q ss_pred ----HHHHHhCCCCeE--EeCCCCCCHHHHHh-h--cC-CCcEEEEecCC---HH----------------HHHHhhhCC
Q 010240 371 ----IDIALACDADGV--HLGQSDMPARTARA-L--LG-PDKIIGVSCKT---PE----------------EAHQAWIDG 421 (514)
Q Consensus 371 ----~~~a~~~ga~gv--hl~~~~~~~~~~~~-~--~~-~~~~ig~s~~~---~~----------------e~~~a~~~g 421 (514)
.+.+.++|+|.+ |.-........+.+ . .+ ...++++.+.| -+ -++.+.+.|
T Consensus 92 v~~av~~~a~lGaD~vTVHa~~G~~~m~aa~e~a~~~~~~~~llaVtvLTS~s~~~l~~l~~~~~~e~V~~lA~~a~~~G 171 (303)
T 3ru6_A 92 MADACEEVSKLGVDMINIHASAGKIAIQEVMTRLSKFSKRPLVLAVSALTSFDEENFFSIYRQKIEEAVINFSKISYENG 171 (303)
T ss_dssp HHHHHHHHHTTTCSEEEEEGGGCHHHHHHHHHHHTTSSSCCEEEEECSCTTCCHHHHHHHHSSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCEEEEeccCCHHHHHHHHHHHHhcCCCceEEEEEEecCCCHHHHHHHHcCCHHHHHHHHHHHHHHcC
Confidence 234457899975 54333211211211 1 11 23567764432 11 133566889
Q ss_pred CcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEEECCCCcc-----------cHHHHHHCCCCCCceEEEeecc
Q 010240 422 ANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVAIGGIGIS-----------NASDVMKIGVSNLKGVAVVSAL 489 (514)
Q Consensus 422 ~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a~GGi~~~-----------~~~~~~~~Ga~~~~gva~~~~i 489 (514)
+|.++.++ .- ++.+++.+ +-.++..+||.+. ++.+++++|++ .+.+||+|
T Consensus 172 ~dGvV~s~------------~E---~~~IR~~~~~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd---~iVvGr~I 233 (303)
T 3ru6_A 172 LDGMVCSV------------FE---SKKIKEHTSSNFLTLTPGIRPFGETNDDQKRVANLAMARENLSD---YIVVGRPI 233 (303)
T ss_dssp CSEEECCT------------TT---HHHHHHHSCTTSEEEECCCCTTC--------CCSHHHHHHTTCS---EEEECHHH
T ss_pred CCEEEECH------------HH---HHHHHHhCCCccEEECCCcCcccCCcccccccCCHHHHHHcCCC---EEEEChHH
Confidence 99986644 11 34555555 3468889999876 78899999999 99999999
Q ss_pred cCCCCHHHHHHHHHHHHHH
Q 010240 490 FDRECILPESKKLHAVLMD 508 (514)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~ 508 (514)
++++||.++++++++.+++
T Consensus 234 ~~a~dp~~a~~~i~~~i~~ 252 (303)
T 3ru6_A 234 YKNENPRAVCEKILNKIHR 252 (303)
T ss_dssp HTSSCHHHHHHHHHHHHC-
T ss_pred hCCCCHHHHHHHHHHHHHh
Confidence 9999999999999998876
No 182
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=97.73 E-value=6.2e-05 Score=72.65 Aligned_cols=82 Identities=23% Similarity=0.278 Sum_probs=67.2
Q ss_pred HHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC--CCCEEEECCCCcccHH
Q 010240 393 TARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS--KLPVVAIGGIGISNAS 470 (514)
Q Consensus 393 ~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~--~~pv~a~GGi~~~~~~ 470 (514)
.+++.. +...+.+.|.|.+|+.+|.+.|+|+|.+-. ..++.++++++.. ++++.|.|||+++|+.
T Consensus 224 ~ar~~~-p~~kIeVEVdtldea~eAl~aGaD~I~LDn------------~~~~~l~~av~~l~~~v~ieaSGGIt~~~I~ 290 (320)
T 3paj_A 224 TAKQLN-PGKPVEVETETLAELEEAISAGADIIMLDN------------FSLEMMREAVKINAGRAALENSGNITLDNLK 290 (320)
T ss_dssp HHHHHS-TTSCEEEEESSHHHHHHHHHTTCSEEEEES------------CCHHHHHHHHHHHTTSSEEEEESSCCHHHHH
T ss_pred HHHHhC-CCCeEEEEECCHHHHHHHHHcCCCEEEECC------------CCHHHHHHHHHHhCCCCeEEEECCCCHHHHH
Confidence 344443 345677899999999999999999998754 2467778777665 7899999999999999
Q ss_pred HHHHCCCCCCceEEEeeccc
Q 010240 471 DVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 471 ~~~~~Ga~~~~gva~~~~i~ 490 (514)
++.++|++ ++.+|+...
T Consensus 291 ~~a~tGVD---~isvGalt~ 307 (320)
T 3paj_A 291 ECAETGVD---YISVGALTK 307 (320)
T ss_dssp HHHTTTCS---EEECTHHHH
T ss_pred HHHHcCCC---EEEECceec
Confidence 99999999 999987543
No 183
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=97.73 E-value=0.00013 Score=67.31 Aligned_cols=132 Identities=14% Similarity=0.085 Sum_probs=95.0
Q ss_pred HHHHHhCCCCeEEeCCCC--CCHH----HHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCH
Q 010240 371 IDIALACDADGVHLGQSD--MPAR----TARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGL 444 (514)
Q Consensus 371 ~~~a~~~ga~gvhl~~~~--~~~~----~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~ 444 (514)
+..+.++||+.|-++... .... ..+..+..++.+-+-+|+.+|...+...+.++|.+=|+..-.|.........
T Consensus 81 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVge~~e~~~~~~~~~~iIayep~waiGtG~~v~t~~~ 160 (225)
T 1hg3_A 81 PEAVKEAGAVGTLLNHSENRMILADLEAAIRRAEEVGLMTMVCSNNPAVSAAVAALNPDYVAVEPPELIGTGIPVSKAKP 160 (225)
T ss_dssp HHHHHHTTCCEEEESCGGGCCBHHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEECCTTTTTTSCCTTTSCT
T ss_pred HHHHHHcCCCEEEECcchhcCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCEEEEeChhhhccCCCCCCCCh
Confidence 788899999999888765 3332 2233445688888889999999988889999998878776433200011223
Q ss_pred HHHHHH----HHcC-CCCEEEECCCCcccH-HHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHH
Q 010240 445 DGLKTV----CLAS-KLPVVAIGGIGISNA-SDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAV 505 (514)
Q Consensus 445 ~~l~~~----~~~~-~~pv~a~GGi~~~~~-~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~ 505 (514)
+.+++. +... +++++.-|||++.|. ..+.+.|++ |+-+|+++++++|+.+.++++.+.
T Consensus 161 d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~~vD---G~LVG~a~l~a~~~~~~i~~l~~~ 224 (225)
T 1hg3_A 161 EVITNTVELVKKVNPEVKVLCGAGISTGEDVKKAIELGTV---GVLLASGVTKAKDPEKAIWDLVSG 224 (225)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCS---EEEESHHHHTCSSHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCC---EEEeCHHHHCCcCHHHHHHHHHhh
Confidence 322222 2222 689999999996654 556678888 999999999999999999888653
No 184
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=97.69 E-value=6.5e-05 Score=74.40 Aligned_cols=82 Identities=21% Similarity=0.185 Sum_probs=63.3
Q ss_pred ecCCHHHHHHhhhCCCcEEEeccccCCCC------CCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCC
Q 010240 407 SCKTPEEAHQAWIDGANYIGCGGVYPTNT------KANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSN 479 (514)
Q Consensus 407 s~~~~~e~~~a~~~g~d~v~~~~vf~t~~------k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~ 479 (514)
.+.++++++.+.+.|+|+|.+|.---+.. ..+.+...++.+.++++..++||++.|||. .+++.+++.+||+
T Consensus 156 ~v~s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~~ipVIa~GGI~~g~Dv~kalalGAd- 234 (336)
T 1ypf_A 156 NVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPIIADGGIRTNGDVAKSIRFGAT- 234 (336)
T ss_dssp EECSHHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTCSSCEEEESCCCSTHHHHHHHHTTCS-
T ss_pred CcCCHHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCC-
Confidence 37899999999999999999853111000 000111136788888888899999999996 8899999999999
Q ss_pred CceEEEeecccC
Q 010240 480 LKGVAVVSALFD 491 (514)
Q Consensus 480 ~~gva~~~~i~~ 491 (514)
+|.+|++++.
T Consensus 235 --aV~iGr~~l~ 244 (336)
T 1ypf_A 235 --MVMIGSLFAG 244 (336)
T ss_dssp --EEEESGGGTT
T ss_pred --EEEeChhhhc
Confidence 9999999984
No 185
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=97.68 E-value=0.00014 Score=69.25 Aligned_cols=83 Identities=14% Similarity=0.225 Sum_probs=66.9
Q ss_pred HHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC--CCCEEEECCCCcccHH
Q 010240 393 TARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS--KLPVVAIGGIGISNAS 470 (514)
Q Consensus 393 ~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~--~~pv~a~GGi~~~~~~ 470 (514)
.+|+.. +...+-+-|.|++|+.+|.+.|+|.|.+-. ..++.++++.+.. ++.+.|.|||+++|+.
T Consensus 200 ~ar~~~-p~~kIeVEv~tl~e~~eAl~aGaDiImLDn------------~s~~~l~~av~~~~~~v~leaSGGIt~~~i~ 266 (300)
T 3l0g_A 200 RLRKNL-KNEYIAIECDNISQVEESLSNNVDMILLDN------------MSISEIKKAVDIVNGKSVLEVSGCVNIRNVR 266 (300)
T ss_dssp HHHHHS-SSCCEEEEESSHHHHHHHHHTTCSEEEEES------------CCHHHHHHHHHHHTTSSEEEEESSCCTTTHH
T ss_pred HHHHhC-CCCCEEEEECCHHHHHHHHHcCCCEEEECC------------CCHHHHHHHHHhhcCceEEEEECCCCHHHHH
Confidence 344443 456778889999999999999999997754 3467777776654 6889999999999999
Q ss_pred HHHHCCCCCCceEEEeecccC
Q 010240 471 DVMKIGVSNLKGVAVVSALFD 491 (514)
Q Consensus 471 ~~~~~Ga~~~~gva~~~~i~~ 491 (514)
++.++|++ .|.+|+...+
T Consensus 267 ~~A~tGVD---~IsvGalths 284 (300)
T 3l0g_A 267 NIALTGVD---YISIGCITNS 284 (300)
T ss_dssp HHHTTTCS---EEECGGGTSS
T ss_pred HHHHcCCC---EEEeCccccC
Confidence 99999999 9999865543
No 186
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=97.68 E-value=0.00052 Score=68.14 Aligned_cols=82 Identities=17% Similarity=0.150 Sum_probs=58.6
Q ss_pred EecCCHHHHHHhhhCCCcEEEeccccCCCCCC-----CCccCCHHHHHHH---HHcCCCCEEEECCCC-cccHHHHHHCC
Q 010240 406 VSCKTPEEAHQAWIDGANYIGCGGVYPTNTKA-----NNLTVGLDGLKTV---CLASKLPVVAIGGIG-ISNASDVMKIG 476 (514)
Q Consensus 406 ~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~-----~~~~~g~~~l~~~---~~~~~~pv~a~GGi~-~~~~~~~~~~G 476 (514)
..+.|+++++.+.+.|+|+|.++ ..++.-.. +.....+..+.++ ++..++||++.|||. +.++.+++.+|
T Consensus 167 g~v~t~e~A~~a~~aGaD~I~v~-~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlalG 245 (351)
T 2c6q_A 167 GNVVTGEMVEELILSGADIIKVG-IGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAG 245 (351)
T ss_dssp EEECSHHHHHHHHHTTCSEEEEC-SSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTT
T ss_pred EeCCCHHHHHHHHHhCCCEEEEC-CCCCcCcCccccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHcC
Confidence 36789999999999999999775 11211000 0000113334444 333589999999997 89999999999
Q ss_pred CCCCceEEEeecccC
Q 010240 477 VSNLKGVAVVSALFD 491 (514)
Q Consensus 477 a~~~~gva~~~~i~~ 491 (514)
|+ +|.+|+.|+.
T Consensus 246 A~---~V~vG~~fl~ 257 (351)
T 2c6q_A 246 AD---FVMLGGMLAG 257 (351)
T ss_dssp CS---EEEESTTTTT
T ss_pred CC---ceeccHHHhc
Confidence 99 9999999973
No 187
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=97.65 E-value=0.00071 Score=63.77 Aligned_cols=172 Identities=14% Similarity=0.078 Sum_probs=104.1
Q ss_pred eEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCCC--HHHHHHHHHHHHHHHhhcCceEEE-c----CcHHHHH
Q 010240 303 FLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDAD--TRGFLEAAKACLQICCVHGVPLLI-N----DRIDIAL 375 (514)
Q Consensus 303 ~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~~--~~~~~~~~~~~~~~~~~~~~~l~v-~----~~~~~a~ 375 (514)
...+| ||.-.. .+++.+.++++++.|.+.|.+=....+ .+...+++.++++ .+++++++ - .+. ...
T Consensus 41 ~~~li-DPdK~~--~~~~~~~~~~~~~sGtDai~VGS~~vt~~~~~~~~~v~~ik~---~~~lPvil~fPP~~g~~-~~i 113 (286)
T 3vk5_A 41 PVHII-DPFKVP--VTEAVEKAAELTRLGFAAVLLASTDYESFESHMEPYVAAVKA---ATPLPVVLHFPPRPGAG-FPV 113 (286)
T ss_dssp EEEEE-CTTTSC--HHHHHHHHHHHHHTTCSCEEEECSCCSSHHHHHHHHHHHHHH---HCSSCEEEECCCBTTTB-SCC
T ss_pred ceEEE-CCCCCC--cHHHHHHHHHHHhcCCCEEEEccCCCCcchHHHHHHHHHHHH---hCCCCEEEECCCCCCCc-ccc
Confidence 34444 554322 245666889999999999999822244 4555555555543 36889988 1 122 222
Q ss_pred hCCCCeEEeCC----CCCCH-HHH--H-----------hhcC-----------CC----cEEE-EecCCHHH------HH
Q 010240 376 ACDADGVHLGQ----SDMPA-RTA--R-----------ALLG-----------PD----KIIG-VSCKTPEE------AH 415 (514)
Q Consensus 376 ~~ga~gvhl~~----~~~~~-~~~--~-----------~~~~-----------~~----~~ig-~s~~~~~e------~~ 415 (514)
.-+||++-+++ .+... ... . +.++ .+ ..++ ....+++. ++
T Consensus 114 ~~~aDa~l~psvlNs~n~~~i~g~~~~~~aa~~v~~~~~~~ge~ip~gYL~v~~g~k~V~fv~~~~~~~~e~A~~~aYa~ 193 (286)
T 3vk5_A 114 VRGADALLLPALLGSGDDYFVWKSFLETLAAFPGRIPREEWPELLLTVALTFGEDPRTGDLLGTVPVSTASTEEIDRYLH 193 (286)
T ss_dssp CTTCSEEEEEEETTBSSHHHHTHHHHHHHHHCSTTSCGGGCCEEEEEEEEECSCCHHHHHHHCBCCCCCSSSHHHHHHHH
T ss_pred ccCCCEEEEEEEecCCCcccccCcHHHHHHhHHHHHHHHHhCCcceEEEEEECCCCceeeeeCCCCCCCHHHHHHHHHHH
Confidence 34788776543 22110 011 0 1111 01 0000 11112322 23
Q ss_pred HhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC--CCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccCC
Q 010240 416 QAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS--KLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFDR 492 (514)
Q Consensus 416 ~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~--~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~ 492 (514)
.+..+|.++|.+-- +. .+...+.++++++.+ ++|+++-|||. ++++.+++++||+ +|.+||++...
T Consensus 194 ~gad~G~~lV~LD~---~~-----~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD---~VVVGSAav~d 262 (286)
T 3vk5_A 194 VARAFGFHMVYLYS---RN-----EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGAD---YVGFAGALEQP 262 (286)
T ss_dssp HHHHTTCSEEEEEC---SS-----SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCS---EEEESGGGSST
T ss_pred HHHHcCCCEEEEcC---CC-----CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCC---EEEECchhhcC
Confidence 34466778886642 11 335689999999998 89999999996 8999999999999 99999999965
No 188
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=97.62 E-value=0.00025 Score=71.87 Aligned_cols=96 Identities=18% Similarity=0.104 Sum_probs=67.2
Q ss_pred HHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCC--CCCccCCHHHHHHHHHc-------CC---CCE
Q 010240 391 ARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTK--ANNLTVGLDGLKTVCLA-------SK---LPV 458 (514)
Q Consensus 391 ~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k--~~~~~~g~~~l~~~~~~-------~~---~pv 458 (514)
...+++..+...++ -.+.|+++++.+.+.|+|+|.+|.-. +... .+.....++.+.++++. .+ +||
T Consensus 203 i~~l~~~~~~pvi~-ggi~t~e~a~~~~~~Gad~i~vg~Gg-~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipv 280 (393)
T 2qr6_A 203 LKEFIGSLDVPVIA-GGVNDYTTALHMMRTGAVGIIVGGGE-NTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHI 280 (393)
T ss_dssp HHHHHHHCSSCEEE-ECCCSHHHHHHHHTTTCSEEEESCCS-CCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEE
T ss_pred HHHHHHhcCCCEEE-CCcCCHHHHHHHHHcCCCEEEECCCc-ccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEE
Confidence 45556655444454 36789999999999999999886311 1110 01111234556555544 33 999
Q ss_pred EEECCCC-cccHHHHHHCCCCCCceEEEeecccC
Q 010240 459 VAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFD 491 (514)
Q Consensus 459 ~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~ 491 (514)
++.|||. .+++.+++.+||+ +|.+|+.|+.
T Consensus 281 ia~GGI~~~~dv~kalalGA~---~V~iG~~~l~ 311 (393)
T 2qr6_A 281 IADGSIENSGDVVKAIACGAD---AVVLGSPLAR 311 (393)
T ss_dssp EECSSCCSHHHHHHHHHHTCS---EEEECGGGGG
T ss_pred EEECCCCCHHHHHHHHHcCCC---EEEECHHHHc
Confidence 9999995 8899999999999 9999999853
No 189
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=97.62 E-value=0.00021 Score=70.47 Aligned_cols=112 Identities=16% Similarity=0.126 Sum_probs=77.2
Q ss_pred HHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC--CCCEEEECCCC-ccc
Q 010240 392 RTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS--KLPVVAIGGIG-ISN 468 (514)
Q Consensus 392 ~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~--~~pv~a~GGi~-~~~ 468 (514)
..+++..+... +--.+.++++++.+.+.|+|.|.++.-.-++- ...+..++.+.++++.+ ++||++.|||. .++
T Consensus 210 ~~lr~~~~~Pv-ivK~v~~~e~A~~a~~~GaD~I~vsn~GG~~~--d~~~~~~~~L~~i~~av~~~ipVia~GGI~~g~D 286 (352)
T 3sgz_A 210 SLLQSITRLPI-ILKGILTKEDAELAMKHNVQGIVVSNHGGRQL--DEVSASIDALREVVAAVKGKIEVYMDGGVRTGTD 286 (352)
T ss_dssp HHHHHHCCSCE-EEEEECSHHHHHHHHHTTCSEEEECCGGGTSS--CSSCCHHHHHHHHHHHHTTSSEEEEESSCCSHHH
T ss_pred HHHHHhcCCCE-EEEecCcHHHHHHHHHcCCCEEEEeCCCCCcc--CCCccHHHHHHHHHHHhCCCCeEEEECCCCCHHH
Confidence 34454443333 33346889999999999999999865333221 12234578888887766 79999999996 789
Q ss_pred HHHHHHCCCCCCceEEEeecccCC------CCHHHHHHHHHHHHHHH
Q 010240 469 ASDVMKIGVSNLKGVAVVSALFDR------ECILPESKKLHAVLMDA 509 (514)
Q Consensus 469 ~~~~~~~Ga~~~~gva~~~~i~~~------~~~~~~~~~~~~~~~~~ 509 (514)
+.+++.+||+ +|.+|+.++-. +.+.+..+.+++.++..
T Consensus 287 v~kaLalGA~---aV~iGr~~l~~l~~~G~~gv~~~l~~l~~el~~~ 330 (352)
T 3sgz_A 287 VLKALALGAR---CIFLGRPILWGLACKGEDGVKEVLDILTAELHRC 330 (352)
T ss_dssp HHHHHHTTCS---EEEESHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCC---EEEECHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 9999999999 99999988731 22234455555554443
No 190
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=97.61 E-value=4.7e-05 Score=70.11 Aligned_cols=113 Identities=13% Similarity=-0.010 Sum_probs=73.3
Q ss_pred HHHHHhCCCCeE--EeCCCCCCHHHHHhhcCCCcEEEEecCC-H-----H----HHHHhhhCCCcEEEeccccCCCCCCC
Q 010240 371 IDIALACDADGV--HLGQSDMPARTARALLGPDKIIGVSCKT-P-----E----EAHQAWIDGANYIGCGGVYPTNTKAN 438 (514)
Q Consensus 371 ~~~a~~~ga~gv--hl~~~~~~~~~~~~~~~~~~~ig~s~~~-~-----~----e~~~a~~~g~d~v~~~~vf~t~~k~~ 438 (514)
++.+.++|+|.+ |............+... ...+++.+.| . + .++. .+.|+|+| .+
T Consensus 78 v~~~~~~GaD~vTvh~~~G~~~l~~~~~~~~-~~~~~V~~lts~~~~l~~~v~~~a~~-~e~G~dvV-~~---------- 144 (213)
T 1vqt_A 78 IKSWDHPAIIGFTVHSCAGYESVERALSATD-KHVFVVVKLTSMEGSLEDYMDRIEKL-NKLGCDFV-LP---------- 144 (213)
T ss_dssp HHHHCCTTEEEEEEEGGGCHHHHHHHHHHCS-SEEEEECCCTTSCCCHHHHHHHHHHH-HHHTCEEE-CC----------
T ss_pred HHHHHHCCCCEEEEeccCCHHHHHHHHHhcC-CCeEEEEEeCCCCHHHHHHHHHHHHH-hcCCCEEE-Ec----------
Confidence 445667899876 54333222222322222 4566765432 1 2 2445 67899944 22
Q ss_pred CccCCHHHHHHHHHcCCCCEEEECCCCccc----------HHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHH
Q 010240 439 NLTVGLDGLKTVCLASKLPVVAIGGIGISN----------ASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVL 506 (514)
Q Consensus 439 ~~~~g~~~l~~~~~~~~~pv~a~GGi~~~~----------~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~ 506 (514)
.+.++++++.++.| +..+||.+++ ..+ +++|++ ++.+||+|++++||.++++++++.+
T Consensus 145 -----~~~~~~ir~~~~~~-~v~pGI~~~~~~~dq~rv~t~~~-i~aGad---~iVvGR~I~~a~dP~~aa~~i~~~i 212 (213)
T 1vqt_A 145 -----GPWAKALREKIKGK-ILVPGIRMEVKADDQKDVVTLEE-MKGIAN---FAVLGREIYLSENPREKIKRIKEMR 212 (213)
T ss_dssp -----HHHHHHHTTTCCSC-EEECCBC---------CCBCHHH-HTTTCS---EEEESHHHHTSSCHHHHHHHHTC--
T ss_pred -----HHHHHHHHHHCCCC-EEECCCCCCCCccchhhcCCHHH-HHCCCC---EEEEChhhcCCCCHHHHHHHHHHHh
Confidence 25667777777667 9999998876 578 999999 9999999999999999999988754
No 191
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=97.61 E-value=9e-05 Score=68.34 Aligned_cols=166 Identities=13% Similarity=0.081 Sum_probs=101.0
Q ss_pred HHHHHHHhCCCCEEEEEcCC-CCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCC----CCCCHH----
Q 010240 322 DAVKAALEGGATIIQLREKD-ADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQ----SDMPAR---- 392 (514)
Q Consensus 322 ~~~~~~~~~Gv~~v~lr~~~-~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~----~~~~~~---- 392 (514)
+.+++++++|.+.|.+=-.. .+.++..++.++++ ++++++++--+--.....|+|++-++. .+....
T Consensus 22 ~~~~~~~~~GtD~i~vGGs~gvt~~~~~~~v~~ik----~~~~Pvvlfp~~~~~v~~gaD~~l~pslln~~~~~~i~g~~ 97 (228)
T 3vzx_A 22 EQLEILCESGTDAVIIGGSDGVTEDNVLRMMSKVR----RFLVPCVLEVSAIEAIVPGFDLYFIPSVLNSKNADWIVGMH 97 (228)
T ss_dssp THHHHHHTSSCSEEEECCCSCCCHHHHHHHHHHHT----TSSSCEEEECSCGGGCCSCCSEEEEEEETTBSSGGGTTHHH
T ss_pred HHHHHHHHcCCCEEEECCcCCCCHHHHHHHHHHhh----ccCCCEEEeCCCHHHccccCCEEEEeeecCCCCcchhhhHH
Confidence 34666789999999996654 55666666665554 367888774322223346899986653 222111
Q ss_pred -HHHhhcCC-----CcEE-E---EecC-------------CHHHH----HHhhhCCCcEEEeccccCCCCCCCCccCCHH
Q 010240 393 -TARALLGP-----DKII-G---VSCK-------------TPEEA----HQAWIDGANYIGCGGVYPTNTKANNLTVGLD 445 (514)
Q Consensus 393 -~~~~~~~~-----~~~i-g---~s~~-------------~~~e~----~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~ 445 (514)
+.-+.++. ..++ | ..-. +++++ ..|.-.|.++|-+-. + +.. ...+
T Consensus 98 ~~a~~~~g~~~~~~e~i~~gYivv~p~s~~~~~~~a~~~~~~e~~~~~a~~a~~~g~~~VYld~---s----G~~-~~~~ 169 (228)
T 3vzx_A 98 QKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFYLEY---S----GVL-GDIE 169 (228)
T ss_dssp HHHHHHHHHHHHHSCEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEEEEC---T----TSC-CCHH
T ss_pred HHHHHHcCCCCcccceeeeEEEEECCCCcceeeecccCCCCHHHHHHHHHHHHHcCCCEEEecC---C----CCc-CCHH
Confidence 11122221 2222 1 1111 22443 233345667774422 1 111 2689
Q ss_pred HHHHHHHcC-CCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHH
Q 010240 446 GLKTVCLAS-KLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVL 506 (514)
Q Consensus 446 ~l~~~~~~~-~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~ 506 (514)
.++++++.+ ++|+++-|||+ ++++.+++ .||+ +|.+||++.+. | +.++++.+.+
T Consensus 170 ~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD---~VVVGSa~v~~--p-~~~~~~v~a~ 225 (228)
T 3vzx_A 170 AVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHAD---VIVVGNAVYED--F-DRALKTVAAV 225 (228)
T ss_dssp HHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCS---EEEECTHHHHC--H-HHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCC---EEEEChHHhcC--H-HHHHHHHHHH
Confidence 999999998 79999999996 89999888 7999 99999999963 3 3445554444
No 192
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=97.60 E-value=0.00015 Score=68.38 Aligned_cols=59 Identities=12% Similarity=0.014 Sum_probs=50.4
Q ss_pred HHHHHHcC-CCCEEEECCCCcc-----------cHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHH
Q 010240 447 LKTVCLAS-KLPVVAIGGIGIS-----------NASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMD 508 (514)
Q Consensus 447 l~~~~~~~-~~pv~a~GGi~~~-----------~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~ 508 (514)
++++++.+ +.++...|||+++ ++.+++++|++ .+.+||+|++++||.++++++++.+++
T Consensus 173 i~~lr~~~~~~~i~v~gGI~~~g~~~~dq~rv~t~~~a~~aGad---~iVvGr~I~~a~dp~~a~~~l~~~i~~ 243 (245)
T 1eix_A 173 AVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVD---YMVIGRPVTQSVDPAQTLKAINASLQR 243 (245)
T ss_dssp HHHHHHHHCSSSEEEECCBCCTTCCCTTCCSCBCHHHHHHTTCS---EEEECHHHHTSSSHHHHHHHHHHHTC-
T ss_pred HHHHHHhcCCCCEEEECCcCCCCCCccchhccCCHHHHHHcCCC---EEEECHHHcCCCCHHHHHHHHHHHHHh
Confidence 55555544 4689999999999 99999999999 999999999999999999999886643
No 193
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=97.58 E-value=0.00016 Score=72.02 Aligned_cols=77 Identities=18% Similarity=0.151 Sum_probs=58.5
Q ss_pred HHHHHHhhhCCCcEEEeccccCCC--C-C--CCCccCCHHHHHHHHHcC-CCCEEEECCC-CcccHHHHHHCCCCCCceE
Q 010240 411 PEEAHQAWIDGANYIGCGGVYPTN--T-K--ANNLTVGLDGLKTVCLAS-KLPVVAIGGI-GISNASDVMKIGVSNLKGV 483 (514)
Q Consensus 411 ~~e~~~a~~~g~d~v~~~~vf~t~--~-k--~~~~~~g~~~l~~~~~~~-~~pv~a~GGi-~~~~~~~~~~~Ga~~~~gv 483 (514)
.+.+..+.+.|+|+|.++.-.... + + ...++..++.++++++.+ ++||++-||| +++++.++++ |++ +|
T Consensus 147 ~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-GaD---~V 222 (350)
T 3b0p_A 147 AQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RVD---GV 222 (350)
T ss_dssp HHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TSS---EE
T ss_pred HHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CCC---EE
Confidence 344678889999999886532110 0 0 012345789999999988 8999999999 5899999998 999 99
Q ss_pred EEeecccC
Q 010240 484 AVVSALFD 491 (514)
Q Consensus 484 a~~~~i~~ 491 (514)
.+|++++.
T Consensus 223 ~iGRa~l~ 230 (350)
T 3b0p_A 223 MLGRAVYE 230 (350)
T ss_dssp EECHHHHH
T ss_pred EECHHHHh
Confidence 99999864
No 194
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=97.55 E-value=0.00026 Score=70.77 Aligned_cols=94 Identities=17% Similarity=0.169 Sum_probs=69.1
Q ss_pred HHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC--CCCEEEECCCC-ccc
Q 010240 392 RTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS--KLPVVAIGGIG-ISN 468 (514)
Q Consensus 392 ~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~--~~pv~a~GGi~-~~~ 468 (514)
..+++..+...++ -.++++++++.+.+.|+|+|.++.-.-.+. ...+..++.+.++++.+ ++||++.|||. .++
T Consensus 222 ~~lr~~~~~Pviv-K~v~~~e~a~~a~~~Gad~I~vs~~ggr~~--~~g~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D 298 (368)
T 2nli_A 222 EEIAGHSGLPVFV-KGIQHPEDADMAIKRGASGIWVSNHGARQL--YEAPGSFDTLPAIAERVNKRVPIVFDSGVRRGEH 298 (368)
T ss_dssp HHHHHHSSSCEEE-EEECSHHHHHHHHHTTCSEEEECCGGGTSC--SSCCCHHHHHHHHHHHHTTSSCEEECSSCCSHHH
T ss_pred HHHHHHcCCCEEE-EcCCCHHHHHHHHHcCCCEEEEcCCCcCCC--CCCCChHHHHHHHHHHhCCCCeEEEECCCCCHHH
Confidence 3445544434443 246899999999999999999864222111 11223468888888766 69999999996 789
Q ss_pred HHHHHHCCCCCCceEEEeecccC
Q 010240 469 ASDVMKIGVSNLKGVAVVSALFD 491 (514)
Q Consensus 469 ~~~~~~~Ga~~~~gva~~~~i~~ 491 (514)
+.+++.+||+ +|.+|+.++.
T Consensus 299 ~~kalalGAd---~V~iGr~~l~ 318 (368)
T 2nli_A 299 VAKALASGAD---VVALGRPVLF 318 (368)
T ss_dssp HHHHHHTTCS---EEEECHHHHH
T ss_pred HHHHHHcCCC---EEEECHHHHH
Confidence 9999999999 9999998873
No 195
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=97.54 E-value=0.00043 Score=68.40 Aligned_cols=79 Identities=19% Similarity=0.122 Sum_probs=61.4
Q ss_pred CCHHHHHHhhhCCCcEEEeccccCC--------CCC--------CCCccCCHHHHHHHHHcC-CCCEEEECCCC-cccHH
Q 010240 409 KTPEEAHQAWIDGANYIGCGGVYPT--------NTK--------ANNLTVGLDGLKTVCLAS-KLPVVAIGGIG-ISNAS 470 (514)
Q Consensus 409 ~~~~e~~~a~~~g~d~v~~~~vf~t--------~~k--------~~~~~~g~~~l~~~~~~~-~~pv~a~GGi~-~~~~~ 470 (514)
.++++++.+.+.|+|+|.++.-.-| ... .......++.+.++++.. ++||++.|||. .+++.
T Consensus 193 ~~~e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~ 272 (332)
T 1vcf_A 193 LSREAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVASGGVYTGTDGA 272 (332)
T ss_dssp CCHHHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCSSSCEEEESSCCSHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcCCCeEEEECCCCCHHHHH
Confidence 6899999999999999988543222 110 111123467778888877 79999999996 88999
Q ss_pred HHHHCCCCCCceEEEeeccc
Q 010240 471 DVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 471 ~~~~~Ga~~~~gva~~~~i~ 490 (514)
+++.+||+ +|.+++.++
T Consensus 273 kal~~GAd---~V~igr~~l 289 (332)
T 1vcf_A 273 KALALGAD---LLAVARPLL 289 (332)
T ss_dssp HHHHHTCS---EEEECGGGH
T ss_pred HHHHhCCC---hHhhhHHHH
Confidence 99999999 999999988
No 196
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=97.51 E-value=0.00054 Score=67.00 Aligned_cols=77 Identities=13% Similarity=0.124 Sum_probs=57.1
Q ss_pred HHHhhhCCCcEEEecccc------C-CCCCCCC--------------ccCCHHHHHHHHHcC--CCCEEEECCC-CcccH
Q 010240 414 AHQAWIDGANYIGCGGVY------P-TNTKANN--------------LTVGLDGLKTVCLAS--KLPVVAIGGI-GISNA 469 (514)
Q Consensus 414 ~~~a~~~g~d~v~~~~vf------~-t~~k~~~--------------~~~g~~~l~~~~~~~--~~pv~a~GGi-~~~~~ 469 (514)
+..+.+.|+|+|.++.-. . ...++.. .+..++.++++++.+ ++||++.||| +++++
T Consensus 178 a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da 257 (311)
T 1jub_A 178 AEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDA 257 (311)
T ss_dssp HHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHH
T ss_pred HHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHH
Confidence 567788999999875432 1 0011100 112367888888888 8999999999 58999
Q ss_pred HHHHHCCCCCCceEEEeecccC-CC
Q 010240 470 SDVMKIGVSNLKGVAVVSALFD-RE 493 (514)
Q Consensus 470 ~~~~~~Ga~~~~gva~~~~i~~-~~ 493 (514)
.+++.+||+ +|.++++++. .+
T Consensus 258 ~~~l~~GAd---~V~vg~~~l~~~p 279 (311)
T 1jub_A 258 FEHLLCGAT---MLQIGTALHKEGP 279 (311)
T ss_dssp HHHHHHTCS---EEEECHHHHHHCT
T ss_pred HHHHHcCCC---EEEEchHHHhcCc
Confidence 999999999 9999999984 44
No 197
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.51 E-value=0.0023 Score=60.09 Aligned_cols=173 Identities=17% Similarity=0.161 Sum_probs=109.0
Q ss_pred HHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcC------cHHHHHhCCCCeEEeCCCCCC-HH
Q 010240 320 ITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLIND------RIDIALACDADGVHLGQSDMP-AR 392 (514)
Q Consensus 320 ~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~------~~~~a~~~ga~gvhl~~~~~~-~~ 392 (514)
-.+.+....+.|++.+++=+=+............+.++++....++.+-. +.+...+.|++-|-++..... +.
T Consensus 33 P~~~a~~~~~~gad~lhvvDld~a~~~~~~~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~~~p~ 112 (243)
T 4gj1_A 33 PLKKFKEYEKAGAKELHLVDLTGAKDPSKRQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDAT 112 (243)
T ss_dssp HHHHHHHHHHHTCCEEEEEEHHHHHCGGGCCHHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTTTCHH
T ss_pred HHHHHHHHHHCCCCEEEEEecCcccccchhHHHHHHHHHHhcCCCeEeccccccHHHHHHHHHcCCCEEEEccccccCCc
Confidence 45667777888999999854221111111111234455666778898743 566778999999999876543 22
Q ss_pred ---HHHhhcCCC-cEEEEec------------------CCHH-HHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHH
Q 010240 393 ---TARALLGPD-KIIGVSC------------------KTPE-EAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKT 449 (514)
Q Consensus 393 ---~~~~~~~~~-~~ig~s~------------------~~~~-e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~ 449 (514)
+..+.++.. ..++..+ .++. .+.+..+.|+.-+++.-+-...+. ....++.++.
T Consensus 113 li~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~~g~~eil~t~Id~DGt~---~G~d~~l~~~ 189 (243)
T 4gj1_A 113 LCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNKGLKHILCTDISKDGTM---QGVNVRLYKL 189 (243)
T ss_dssp HHHHHHHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHTTTCCEEEEEETTC--------CCCHHHHHH
T ss_pred hHHHHHhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhhcCCcEEEeeeecccccc---cCCCHHHHHH
Confidence 222333332 2333332 1233 466777899999988665543333 3356899999
Q ss_pred HHHcC-CCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccCCC-CHHHHH
Q 010240 450 VCLAS-KLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFDRE-CILPES 499 (514)
Q Consensus 450 ~~~~~-~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~~-~~~~~~ 499 (514)
+++.+ ++||+|.||+. .+++..+ +.+++ |+.++++|+.-. +..++.
T Consensus 190 l~~~~~~ipviasGGv~~~~Dl~~l-~~~~~---gvivg~Al~~g~i~l~ea~ 238 (243)
T 4gj1_A 190 IHEIFPNICIQASGGVASLKDLENL-KGICS---GVIVGKALLDGVFSVEEGI 238 (243)
T ss_dssp HHHHCTTSEEEEESCCCSHHHHHHT-TTTCS---EEEECHHHHTTSSCHHHHH
T ss_pred HHHhcCCCCEEEEcCCCCHHHHHHH-HccCc---hhehHHHHHCCCCCHHHHH
Confidence 98876 69999999996 7888876 55688 999999998432 444433
No 198
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=97.51 E-value=0.00025 Score=64.89 Aligned_cols=76 Identities=17% Similarity=0.171 Sum_probs=57.9
Q ss_pred HHHhhcCCCcEEEE-ecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCcccHHH
Q 010240 393 TARALLGPDKIIGV-SCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGISNASD 471 (514)
Q Consensus 393 ~~~~~~~~~~~ig~-s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~~~~~~ 471 (514)
.+|+..+.+.++|+ +++|++++..|.+.|+||+ ++|.|+ .+.++..+ ..++|+++ |..|++.+..
T Consensus 54 ~ir~~~~~~~~ig~~~v~~~~~~~~a~~~Gad~i-v~~~~~-----------~~~~~~~~-~~g~~vi~-g~~t~~e~~~ 119 (205)
T 1wa3_A 54 ELSFLKEKGAIIGAGTVTSVEQCRKAVESGAEFI-VSPHLD-----------EEISQFCK-EKGVFYMP-GVMTPTELVK 119 (205)
T ss_dssp HTHHHHHTTCEEEEESCCSHHHHHHHHHHTCSEE-ECSSCC-----------HHHHHHHH-HHTCEEEC-EECSHHHHHH
T ss_pred HHHHHCCCCcEEEecccCCHHHHHHHHHcCCCEE-EcCCCC-----------HHHHHHHH-HcCCcEEC-CcCCHHHHHH
Confidence 44544444678898 5689999999999999999 888764 23444433 45899988 6667888999
Q ss_pred HHHCCCCCCceEEE
Q 010240 472 VMKIGVSNLKGVAV 485 (514)
Q Consensus 472 ~~~~Ga~~~~gva~ 485 (514)
+++.|++ .+.+
T Consensus 120 a~~~Gad---~vk~ 130 (205)
T 1wa3_A 120 AMKLGHT---ILKL 130 (205)
T ss_dssp HHHTTCC---EEEE
T ss_pred HHHcCCC---EEEE
Confidence 9999999 7754
No 199
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=97.48 E-value=0.00025 Score=70.19 Aligned_cols=83 Identities=13% Similarity=0.091 Sum_probs=63.1
Q ss_pred HHHhhhCCCcEEEeccccCCCC-CCCCccCCHHHHHHHHHcCCCCEEEECCC-CcccHHHHHHCC-CCCCceEEEeeccc
Q 010240 414 AHQAWIDGANYIGCGGVYPTNT-KANNLTVGLDGLKTVCLASKLPVVAIGGI-GISNASDVMKIG-VSNLKGVAVVSALF 490 (514)
Q Consensus 414 ~~~a~~~g~d~v~~~~vf~t~~-k~~~~~~g~~~l~~~~~~~~~pv~a~GGi-~~~~~~~~~~~G-a~~~~gva~~~~i~ 490 (514)
++.+.+.|+||+-++.-..... .+..+...++.++++++.+++||++.||| +++++.++++.| ++ +|+++++++
T Consensus 235 a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD---~V~iGR~~i 311 (338)
T 1z41_A 235 AKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRAD---LIFIGRELL 311 (338)
T ss_dssp HHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCS---EEEECHHHH
T ss_pred HHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCce---EEeecHHHH
Confidence 5566789999998764321111 12223346788899998889999999999 699999999998 99 999999999
Q ss_pred CCCCHHHHH
Q 010240 491 DRECILPES 499 (514)
Q Consensus 491 ~~~~~~~~~ 499 (514)
.+++....+
T Consensus 312 ~nPdl~~ki 320 (338)
T 1z41_A 312 RDPFFARTA 320 (338)
T ss_dssp HCTTHHHHH
T ss_pred hCchHHHHH
Confidence 877755443
No 200
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=97.47 E-value=0.00031 Score=64.52 Aligned_cols=169 Identities=10% Similarity=0.014 Sum_probs=103.8
Q ss_pred CHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHH-HHHHHhhcCceEEE----cC-------cHHHHHhCCCCeE--Ee
Q 010240 319 SITDAVKAALEGGATIIQLREKDADTRGFLEAAKA-CLQICCVHGVPLLI----ND-------RIDIALACDADGV--HL 384 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~-~~~~~~~~~~~l~v----~~-------~~~~a~~~ga~gv--hl 384 (514)
+..+.++++ ...+.++.+-.. -+...-.. +..+.+.+|..++. +| ..+.+.++ +|.+ |-
T Consensus 12 ~al~l~~~l-~~~v~~~KvG~~-----l~~~~G~~~v~~L~~~~g~~VflDlK~~DIpnTv~~a~~~~~~~-ad~vTvh~ 84 (215)
T 3ve9_A 12 IPEETLRKL-NGKVAGIKVGWP-----LLLNLGKEKVKELVGLVDGIKILDLKLADIDNTMILIVDELKDI-TNSFIAHA 84 (215)
T ss_dssp CCHHHHHHH-HTTSSEEEEEHH-----HHHHHCHHHHHHHHTTCCSEEEEEEEECSCHHHHHHHHHHHTTT-CSEEEEEG
T ss_pred HHHHHHHHh-CCcCcEEEecHH-----HHHhhCHHHHHHHHHhcCCcEEEEecccCchhHHHHHHHHHHHh-hheEEEeC
Confidence 456666655 455777766432 22222222 23333325766664 33 12444567 8874 64
Q ss_pred CCC-CCCHHHHHhhcCCCcEEEEecCC--------HHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCC
Q 010240 385 GQS-DMPARTARALLGPDKIIGVSCKT--------PEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASK 455 (514)
Q Consensus 385 ~~~-~~~~~~~~~~~~~~~~ig~s~~~--------~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~ 455 (514)
-.. ........ . +...++-.|..+ ..-++.|.+.|.|-+..|+ .-++.++.+++.++
T Consensus 85 ~~G~~~~~~~~~-~-~~~v~vLts~s~~~~~~~~v~~~a~~a~~~G~~GvV~sa------------t~~~e~~~ir~~~~ 150 (215)
T 3ve9_A 85 FVGVEGSLASLS-Q-RVDLFLVLSMSHPGWNDAFYPYLREVARRVNPKGFVAPA------------TRPSMISRVKGDFP 150 (215)
T ss_dssp GGCTTTTHHHHH-H-HSEEEEECCCSSTTCCGGGHHHHHHHHHHHCCSEEECCT------------TSHHHHHHHHHHCT
T ss_pred CCCcHHHHHhHh-c-CCCEEEEEecCCcchHHHHHHHHHHHHHHcCCCceeeCC------------CCHHHHHHHHHhCC
Confidence 433 22222221 1 122222222222 2235667788999776654 12456677777663
Q ss_pred CCEEEECCCCcc--cHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHHhh
Q 010240 456 LPVVAIGGIGIS--NASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDAVQ 511 (514)
Q Consensus 456 ~pv~a~GGi~~~--~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~~~ 511 (514)
-.++..+||.++ +..+++++|++ .+.+||.|++++||.++++++++.+++.+.
T Consensus 151 ~f~~v~pGI~~~g~~~~~a~~~Gad---~iVvGr~I~~a~dp~~a~~~i~~~i~~~~~ 205 (215)
T 3ve9_A 151 DKLVISPGVGTQGAKPGIALCHGAD---YEIVGRSVYQSADPVRKLEEIVRSQEEVLS 205 (215)
T ss_dssp TSEEEECCTTSTTCCTTHHHHTTCS---EEEECHHHHTSSSHHHHHHHHHHHHHHHC-
T ss_pred CcEEEcCCCCcCcCCHHHHHHcCCC---EEEeCHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 367788999988 88899999999 999999999999999999999999988754
No 201
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=97.42 E-value=0.00038 Score=70.10 Aligned_cols=92 Identities=18% Similarity=0.166 Sum_probs=66.3
Q ss_pred HHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC--CCCEEEECCCC-cccHH
Q 010240 394 ARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS--KLPVVAIGGIG-ISNAS 470 (514)
Q Consensus 394 ~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~--~~pv~a~GGi~-~~~~~ 470 (514)
+++..+...++. .+.++++++.+.+.|+|+|.++.-...+ ....+..++.+.++++.+ ++||++.|||. .+++.
T Consensus 247 lr~~~~~PvivK-gv~~~e~A~~a~~aGad~I~vs~~ggr~--~~~g~~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~ 323 (392)
T 2nzl_A 247 LRRLTSLPIVAK-GILRGDDAREAVKHGLNGILVSNHGARQ--LDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVL 323 (392)
T ss_dssp HC--CCSCEEEE-EECCHHHHHHHHHTTCCEEEECCGGGTS--STTCCCHHHHHHHHHHHHTTSSEEEECSSCCSHHHHH
T ss_pred HHHhhCCCEEEE-ecCCHHHHHHHHHcCCCEEEeCCCCCCc--CCCCcChHHHHHHHHHHcCCCCEEEEECCCCCHHHHH
Confidence 333333344442 3578999999999999999996422211 111223467788887765 59999999996 78999
Q ss_pred HHHHCCCCCCceEEEeecccC
Q 010240 471 DVMKIGVSNLKGVAVVSALFD 491 (514)
Q Consensus 471 ~~~~~Ga~~~~gva~~~~i~~ 491 (514)
+++.+||+ +|.+|+.++.
T Consensus 324 kalalGAd---~V~iGr~~l~ 341 (392)
T 2nzl_A 324 KALALGAK---AVFVGRPIVW 341 (392)
T ss_dssp HHHHTTCS---EEEECHHHHH
T ss_pred HHHHhCCC---eeEECHHHHH
Confidence 99999999 9999998873
No 202
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.39 E-value=0.0015 Score=67.10 Aligned_cols=95 Identities=23% Similarity=0.277 Sum_probs=68.4
Q ss_pred HHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEec--c--ccCCCCCCCCccCCHHHHH------HHHHcCCCCEEEE
Q 010240 392 RTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCG--G--VYPTNTKANNLTVGLDGLK------TVCLASKLPVVAI 461 (514)
Q Consensus 392 ~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~--~--vf~t~~k~~~~~~g~~~l~------~~~~~~~~pv~a~ 461 (514)
..+++.++.-.+++-.+.|.+.++...+.|||.|-+| | +-.|.. ....|...+. +.+....+||+|-
T Consensus 314 ~~ik~~~p~~~viaGNVaT~e~a~~Li~aGAD~vkVGiGpGSiCtTr~---v~GvG~PQ~tAi~~~a~~a~~~~vpvIAD 390 (556)
T 4af0_A 314 KWIKQTYPKIDVIAGNVVTREQAAQLIAAGADGLRIGMGSGSICITQE---VMAVGRPQGTAVYAVAEFASRFGIPCIAD 390 (556)
T ss_dssp HHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCCTT---TCCSCCCHHHHHHHHHHHHGGGTCCEEEE
T ss_pred HHHHhhCCcceEEeccccCHHHHHHHHHcCCCEEeecCCCCccccccc---ccCCCCcHHHHHHHHHHHHHHcCCCEEec
Confidence 3455555445566778889999999999999998763 3 222222 2233433333 3344568999999
Q ss_pred CCCC-cccHHHHHHCCCCCCceEEEeecccCC
Q 010240 462 GGIG-ISNASDVMKIGVSNLKGVAVVSALFDR 492 (514)
Q Consensus 462 GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~ 492 (514)
|||. ..++..++.+||+ .|-+||.|...
T Consensus 391 GGI~~sGDi~KAlaaGAd---~VMlGsllAGt 419 (556)
T 4af0_A 391 GGIGNIGHIAKALALGAS---AVMMGGLLAGT 419 (556)
T ss_dssp SCCCSHHHHHHHHHTTCS---EEEESTTTTTB
T ss_pred CCcCcchHHHHHhhcCCC---EEEEchhhccc
Confidence 9997 7899999999999 99999988754
No 203
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=97.39 E-value=0.00046 Score=63.75 Aligned_cols=86 Identities=14% Similarity=0.144 Sum_probs=69.4
Q ss_pred HHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCcc--cHHHHHHCCCCCCceEEEeecc
Q 010240 412 EEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGIS--NASDVMKIGVSNLKGVAVVSAL 489 (514)
Q Consensus 412 ~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~~--~~~~~~~~Ga~~~~gva~~~~i 489 (514)
.-+..+.+.|+|-+..|+- -.+.++.+++.++--++..+||.+. +..+++++|++ .+.+|+.|
T Consensus 126 ~~a~~a~~~g~~GvV~sat------------~p~e~~~ir~~~~~~~~vtPGI~~~g~tp~~a~~~Gad---~iVVGR~I 190 (222)
T 4dbe_A 126 YIKNVIREISPKGIVVGGT------------KLDHITQYRRDFEKMTIVSPGMGSQGGSYGDAVCAGAD---YEIIGRSI 190 (222)
T ss_dssp HHHHHHHHHCCSEEEECTT------------CHHHHHHHHHHCTTCEEEECCBSTTSBCTTHHHHHTCS---EEEECHHH
T ss_pred HHHHHHHHhCCCEEEECCC------------CHHHHHHHHHhCCCCEEEcCCcccCccCHHHHHHcCCC---EEEECHHh
Confidence 4466778899998877651 2355666776664367789999987 78889999999 99999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHhhh
Q 010240 490 FDRECILPESKKLHAVLMDAVQR 512 (514)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~ 512 (514)
++++||.++++++++.+++.+++
T Consensus 191 ~~A~dP~~aa~~i~~~i~~~~~~ 213 (222)
T 4dbe_A 191 YNAGNPLTALRTINKIIEDKVMK 213 (222)
T ss_dssp HTSSSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999887543
No 204
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=97.37 E-value=0.0024 Score=58.94 Aligned_cols=154 Identities=14% Similarity=0.141 Sum_probs=95.8
Q ss_pred HHHHHHHHhCCCCEEEEEcCC-CCHHHHHHHHHHHHHHHhhcCceEEEcC-cHHHHHhCCCCeEEeCC---C-CCCH---
Q 010240 321 TDAVKAALEGGATIIQLREKD-ADTRGFLEAAKACLQICCVHGVPLLIND-RIDIALACDADGVHLGQ---S-DMPA--- 391 (514)
Q Consensus 321 ~~~~~~~~~~Gv~~v~lr~~~-~~~~~~~~~~~~~~~~~~~~~~~l~v~~-~~~~a~~~ga~gvhl~~---~-~~~~--- 391 (514)
.+.+++++++|.+.|++=-.. .+.++..++++++++ +++++++-- +++ ....|+|++-++. . +...
T Consensus 26 ~~~l~~~~~~GtDaI~vGgs~gvt~~~~~~~v~~ik~----~~~Piil~p~~~~-~~~~gaD~il~pslln~~~~~~i~g 100 (235)
T 3w01_A 26 DDDLDAICMSQTDAIMIGGTDDVTEDNVIHLMSKIRR----YPLPLVLEISNIE-SVMPGFDFYFVPTVLNSTDVAFHNG 100 (235)
T ss_dssp HHHHHHHHTSSCSEEEECCSSCCCHHHHHHHHHHHTT----SCSCEEEECCCST-TCCTTCSEEEEEEETTBSSGGGTTH
T ss_pred HHHHHHHHHcCCCEEEECCcCCcCHHHHHHHHHHhcC----cCCCEEEecCCHH-HhhcCCCEEEEccccCCCCcchhhh
Confidence 456777889999999996654 566666776666653 678886632 232 2345899986653 2 2211
Q ss_pred --HHHHhhcCC-----CcEE-E---EecC-------------CHHHHHHhh-----hCCCcEEEeccccCCCCCCCCccC
Q 010240 392 --RTARALLGP-----DKII-G---VSCK-------------TPEEAHQAW-----IDGANYIGCGGVYPTNTKANNLTV 442 (514)
Q Consensus 392 --~~~~~~~~~-----~~~i-g---~s~~-------------~~~e~~~a~-----~~g~d~v~~~~vf~t~~k~~~~~~ 442 (514)
.+.-+.++. ..+. | +.-. +++++.... -+|..|+-+ .+ .+.+ .
T Consensus 101 ~~~~a~~~~gl~~~~~e~i~~gYivv~p~s~v~~v~~a~~~~~~e~iaa~A~~a~~~~g~~~vY~------e~-sG~~-g 172 (235)
T 3w01_A 101 TLLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYI------EY-SGIY-G 172 (235)
T ss_dssp HHHHHHHHHGGGCCGGGEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCCSEEEE------EC-TTSC-C
T ss_pred HHHHHHHHcCCCCcccceeeeeEEEECCCCChhhcccCCcCCCHHHHHHHHHHHHHHcCCCEEEE------ec-CCCc-C
Confidence 111122222 2222 1 1111 233333221 136666633 11 1222 2
Q ss_pred CHHHHHHHHHcC-CCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccC
Q 010240 443 GLDGLKTVCLAS-KLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFD 491 (514)
Q Consensus 443 g~~~l~~~~~~~-~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~ 491 (514)
..+.++++++.. ++|++.-|||+ ++.+.++.+ ||+ +|.+||+|.+
T Consensus 173 ~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~-gAD---~VVVGSai~~ 219 (235)
T 3w01_A 173 DVSKVQAVSEHLTETQLFYGGGISSEQQATEMAA-IAD---TIIVGDIIYK 219 (235)
T ss_dssp CHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT-TSS---EEEECTHHHH
T ss_pred CHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc-CCC---EEEECCceec
Confidence 689999999988 89999999996 888988887 999 9999999996
No 205
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=97.35 E-value=0.00069 Score=66.97 Aligned_cols=83 Identities=12% Similarity=0.060 Sum_probs=61.8
Q ss_pred HHHhhhCCCcEEEecc-ccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCC-CCCCceEEEeeccc
Q 010240 414 AHQAWIDGANYIGCGG-VYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIG-VSNLKGVAVVSALF 490 (514)
Q Consensus 414 ~~~a~~~g~d~v~~~~-vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~G-a~~~~gva~~~~i~ 490 (514)
++...+.|+||+-++. -+.....+..+...++.++++++.+++||++.|||+ ++++.++++.| ++ +|++|++++
T Consensus 235 a~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD---~V~iGR~~l 311 (340)
T 3gr7_A 235 AKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRAD---LVFLGRELL 311 (340)
T ss_dssp HHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCS---EEEECHHHH
T ss_pred HHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCee---EEEecHHHH
Confidence 5666789999997742 111111111233457888999998999999999995 89999999999 99 999999999
Q ss_pred CCCCHHHHH
Q 010240 491 DRECILPES 499 (514)
Q Consensus 491 ~~~~~~~~~ 499 (514)
..++....+
T Consensus 312 anPdl~~ki 320 (340)
T 3gr7_A 312 RNPYWPYAA 320 (340)
T ss_dssp HCTTHHHHH
T ss_pred hCchHHHHH
Confidence 877754443
No 206
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=97.32 E-value=0.00078 Score=65.95 Aligned_cols=98 Identities=16% Similarity=0.051 Sum_probs=67.9
Q ss_pred HhhcCCCcEEEEecC-CHHH----HHHhhhCC-CcEEEecccc------C-CCCCCCC--------------ccCCHHHH
Q 010240 395 RALLGPDKIIGVSCK-TPEE----AHQAWIDG-ANYIGCGGVY------P-TNTKANN--------------LTVGLDGL 447 (514)
Q Consensus 395 ~~~~~~~~~ig~s~~-~~~e----~~~a~~~g-~d~v~~~~vf------~-t~~k~~~--------------~~~g~~~l 447 (514)
++......++-.+.. +.++ +..+.+.| +|+|.++.-. . ...++.. .+..++.+
T Consensus 156 r~~~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i 235 (314)
T 2e6f_A 156 SLAYGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANV 235 (314)
T ss_dssp HHHHCSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHH
T ss_pred HHhcCCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHH
Confidence 333334455544443 5666 67778999 9999876432 1 0011100 01236888
Q ss_pred HHHHHcC-CCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccC-CCCH
Q 010240 448 KTVCLAS-KLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFD-RECI 495 (514)
Q Consensus 448 ~~~~~~~-~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~-~~~~ 495 (514)
+++++.+ ++||++.|||+ ++++.+++.+||+ +|.++++++. .++.
T Consensus 236 ~~v~~~~~~ipvi~~GGI~~~~da~~~l~~GAd---~V~ig~~~l~~~p~~ 283 (314)
T 2e6f_A 236 NAFYRRCPDKLVFGCGGVYSGEDAFLHILAGAS---MVQVGTALQEEGPGI 283 (314)
T ss_dssp HHHHHHCTTSEEEEESSCCSHHHHHHHHHHTCS---SEEECHHHHHHCTTH
T ss_pred HHHHHhcCCCCEEEECCCCCHHHHHHHHHcCCC---EEEEchhhHhcCcHH
Confidence 8998888 99999999996 8999999999999 9999999994 5543
No 207
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=97.31 E-value=0.0003 Score=69.99 Aligned_cols=81 Identities=16% Similarity=0.217 Sum_probs=60.6
Q ss_pred CCHHHHHHhhhCCCcEEEeccccCCC-C-----CC--------CCccCCHHHHHHHHHcC-CCCEEEECCCC-cccHHHH
Q 010240 409 KTPEEAHQAWIDGANYIGCGGVYPTN-T-----KA--------NNLTVGLDGLKTVCLAS-KLPVVAIGGIG-ISNASDV 472 (514)
Q Consensus 409 ~~~~e~~~a~~~g~d~v~~~~vf~t~-~-----k~--------~~~~~g~~~l~~~~~~~-~~pv~a~GGi~-~~~~~~~ 472 (514)
.+++++..+.+.|+|+|.++.-..|. . ++ ......++.++++++.. ++||++.|||. ++++.++
T Consensus 190 ~~~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~k~ 269 (349)
T 1p0k_A 190 MSKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQDALDVAKA 269 (349)
T ss_dssp CCHHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHH
Confidence 46889999999999999985211110 0 11 11223467788888776 89999999996 8999999
Q ss_pred HHCCCCCCceEEEeecccCC
Q 010240 473 MKIGVSNLKGVAVVSALFDR 492 (514)
Q Consensus 473 ~~~Ga~~~~gva~~~~i~~~ 492 (514)
+.+||+ +|.+|++++..
T Consensus 270 l~~GAd---~V~iG~~~l~~ 286 (349)
T 1p0k_A 270 IALGAS---CTGMAGHFLKA 286 (349)
T ss_dssp HHTTCS---EEEECHHHHHH
T ss_pred HHcCCC---EEEEcHHHHHH
Confidence 999999 99999999853
No 208
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=97.30 E-value=0.00062 Score=70.97 Aligned_cols=93 Identities=14% Similarity=0.095 Sum_probs=67.5
Q ss_pred HHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-------CCCEEEECCCC
Q 010240 393 TARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-------KLPVVAIGGIG 465 (514)
Q Consensus 393 ~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-------~~pv~a~GGi~ 465 (514)
.+++..+...++- .+.++++++.+.+.|+|+|.++.-.-++- +.....++.+.++++.+ ++||++.|||.
T Consensus 337 ~lr~~~~~PvivK-gv~~~e~A~~a~~aGad~I~vs~hgG~~~--d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~ 413 (511)
T 1kbi_A 337 ELKKKTKLPIVIK-GVQRTEDVIKAAEIGVSGVVLSNHGGRQL--DFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVR 413 (511)
T ss_dssp HHHHHCSSCEEEE-EECSHHHHHHHHHTTCSEEEECCTTTTSS--TTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCC
T ss_pred HHHHHhCCcEEEE-eCCCHHHHHHHHHcCCCEEEEcCCCCccC--CCCCchHHHHHHHHHHHHhhccCCCcEEEEECCCC
Confidence 4455444343332 35679999999999999999964322211 11122467777777655 79999999996
Q ss_pred -cccHHHHHHCCCCCCceEEEeecccC
Q 010240 466 -ISNASDVMKIGVSNLKGVAVVSALFD 491 (514)
Q Consensus 466 -~~~~~~~~~~Ga~~~~gva~~~~i~~ 491 (514)
.+++.+++.+||+ +|.+|+.++.
T Consensus 414 ~g~Dv~kaLalGAd---aV~iGr~~l~ 437 (511)
T 1kbi_A 414 RGTDVLKALCLGAK---GVGLGRPFLY 437 (511)
T ss_dssp SHHHHHHHHHHTCS---EEEECHHHHH
T ss_pred CHHHHHHHHHcCCC---EEEECHHHHH
Confidence 7899999999999 9999998873
No 209
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=97.28 E-value=0.00027 Score=66.47 Aligned_cols=176 Identities=14% Similarity=0.108 Sum_probs=111.4
Q ss_pred HHHhCCCCEEEEE------cCC----------CCHH-HHHHHHHHHHHHHhhcCceEEE--c---------CcHHHHHhC
Q 010240 326 AALEGGATIIQLR------EKD----------ADTR-GFLEAAKACLQICCVHGVPLLI--N---------DRIDIALAC 377 (514)
Q Consensus 326 ~~~~~Gv~~v~lr------~~~----------~~~~-~~~~~~~~~~~~~~~~~~~l~v--~---------~~~~~a~~~ 377 (514)
.+-++|+++|.+- ... .|.. -..++++++.+.++ +++++- + ..++...+.
T Consensus 43 ~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~e~~~evlp~v~--~iPV~Agv~~~DP~~~~g~~Le~lk~~ 120 (286)
T 2p10_A 43 SEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVVR--HTPVLAGVNGTDPFMVMSTFLRELKEI 120 (286)
T ss_dssp HHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCS--SSCEEEEECTTCTTCCHHHHHHHHHHH
T ss_pred HHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHHHHHHhhhccCC--CCCEEEEECCcCCCcCHHHHHHHHHHh
Confidence 3446788988872 111 1222 23455666665554 455552 1 135666788
Q ss_pred CCCeEEeCCC--------------C------CCHHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCC
Q 010240 378 DADGVHLGQS--------------D------MPARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKA 437 (514)
Q Consensus 378 ga~gvhl~~~--------------~------~~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~ 437 (514)
|+.|+ +..+ . .....+++....++...+-+.|++|++...++|+|+|.+.|-..+...-
T Consensus 121 Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti~~v~~~eeA~amA~agpDiI~~h~glT~gglI 199 (286)
T 2p10_A 121 GFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTPYVFSPEDAVAMAKAGADILVCHMGLTTGGAI 199 (286)
T ss_dssp TCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEECCEECSHHHHHHHHHHTCSEEEEECSCC-----
T ss_pred CCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHcCCCEEEECCCCCCCCcc
Confidence 99999 5554 1 1233455555667777777789999999999999999776643322111
Q ss_pred CC-ccCC----HHHHHHHHHc---C--CCCEEEEC-CCC-cccHHHHHHC--CCCCCceEEEeecccCCCCHHHHHHHHH
Q 010240 438 NN-LTVG----LDGLKTVCLA---S--KLPVVAIG-GIG-ISNASDVMKI--GVSNLKGVAVVSALFDRECILPESKKLH 503 (514)
Q Consensus 438 ~~-~~~g----~~~l~~~~~~---~--~~pv~a~G-Gi~-~~~~~~~~~~--Ga~~~~gva~~~~i~~~~~~~~~~~~~~ 503 (514)
+. .... .+.++++.+. . ++.|+.-| ||+ ++++..+++. |++ |+...|++.+.+ |++..+++.
T Consensus 200 G~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~~~l~~t~G~~---G~~gASsier~p-~e~ai~~~~ 275 (286)
T 2p10_A 200 GARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDARFILDSCQGCH---GFYGASSMERLP-AEEAIRSQT 275 (286)
T ss_dssp ----CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHHHHHHHHCTTCC---EEEESHHHHHHH-HHHHHHHHH
T ss_pred cCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHHHHHHhcCCCcc---EEEeehhhhcCC-HHHHHHHHH
Confidence 11 1122 3344444432 2 56666666 785 8999999998 999 999999999877 888887777
Q ss_pred HHHHH
Q 010240 504 AVLMD 508 (514)
Q Consensus 504 ~~~~~ 508 (514)
+.++.
T Consensus 276 ~~fk~ 280 (286)
T 2p10_A 276 LAFKA 280 (286)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 77665
No 210
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=97.21 E-value=0.0038 Score=61.62 Aligned_cols=83 Identities=12% Similarity=-0.001 Sum_probs=60.0
Q ss_pred HHHhhhCCCcEEEeccccCCCCC-CCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCC-CCCCceEEEeeccc
Q 010240 414 AHQAWIDGANYIGCGGVYPTNTK-ANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIG-VSNLKGVAVVSALF 490 (514)
Q Consensus 414 ~~~a~~~g~d~v~~~~vf~t~~k-~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~G-a~~~~gva~~~~i~ 490 (514)
++...+. +||+-++.-.....+ +..+...++.++++++.+++||++.|||+ ++.+.++++.| ++ +|++|+.++
T Consensus 236 a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~aD---~V~iGR~~l 311 (343)
T 3kru_A 236 INMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNERAD---LVALGRELL 311 (343)
T ss_dssp HHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTSCS---EEEESHHHH
T ss_pred HHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcCcccceeeeeeHHHHHHHHHhchhhH---HHHHHHHHh
Confidence 4445567 999987421111111 11233457888888888899999999996 89999999998 88 999999999
Q ss_pred CCCCHHHHHH
Q 010240 491 DRECILPESK 500 (514)
Q Consensus 491 ~~~~~~~~~~ 500 (514)
..++....++
T Consensus 312 anPdl~~k~~ 321 (343)
T 3kru_A 312 RNPYWVLHTY 321 (343)
T ss_dssp HCTTHHHHTC
T ss_pred cCCeEEEEEe
Confidence 8777655443
No 211
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=97.17 E-value=0.0044 Score=58.76 Aligned_cols=151 Identities=13% Similarity=0.173 Sum_probs=94.7
Q ss_pred CCceEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcC-----CCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHH
Q 010240 300 SDLFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREK-----DADTRGFLEAAKACLQICCVHGVPLLINDRIDIA 374 (514)
Q Consensus 300 ~~~~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a 374 (514)
.+..+-.++.-+.-....+.-..-++.+++.|++-|-+-.+ ..+.+...+.++.+.+.|....+++|+....
T Consensus 108 s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~--- 184 (288)
T 3oa3_A 108 TQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQ--- 184 (288)
T ss_dssp SSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGG---
T ss_pred CCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCC---
Confidence 34566666653332100122233456788999988876443 4566777777888888776543455553311
Q ss_pred HhCCCCeEEeCCCCCCHHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHH--
Q 010240 375 LACDADGVHLGQSDMPARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCL-- 452 (514)
Q Consensus 375 ~~~ga~gvhl~~~~~~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~-- 452 (514)
+...++. .-++.|.+.|+|||-.|.-|. ..++.....+.+++..+
T Consensus 185 --------------Lt~eei~----------------~A~~ia~eaGADfVKTSTGf~---~~GAT~edv~lmr~~v~~~ 231 (288)
T 3oa3_A 185 --------------LTADEII----------------AGCVLSSLAGADYVKTSTGFN---GPGASIENVSLMSAVCDSL 231 (288)
T ss_dssp --------------CCHHHHH----------------HHHHHHHHTTCSEEECCCSSS---SCCCCHHHHHHHHHHHHHS
T ss_pred --------------CCHHHHH----------------HHHHHHHHcCCCEEEcCCCCC---CCCCCHHHHHHHHHHHHHh
Confidence 1111111 125667799999997765553 23344345666777765
Q ss_pred cCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecc
Q 010240 453 ASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSAL 489 (514)
Q Consensus 453 ~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i 489 (514)
..++||-|.|||. .+++.+++++||+ -++..+++
T Consensus 232 g~~v~VKAAGGIrt~edAl~mi~aGA~---RiGtS~g~ 266 (288)
T 3oa3_A 232 QSETRVKASGGIRTIEDCVKMVRAGAE---RLGASAGV 266 (288)
T ss_dssp SSCCEEEEESSCCSHHHHHHHHHTTCS---EEEESCHH
T ss_pred CCCceEEEeCCCCCHHHHHHHHHcCCc---eeehhhHH
Confidence 2479999999997 6889999999999 88877653
No 212
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=97.17 E-value=0.0012 Score=65.30 Aligned_cols=45 Identities=24% Similarity=0.473 Sum_probs=39.7
Q ss_pred HHHHHHHHHcC--CCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccC
Q 010240 444 LDGLKTVCLAS--KLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFD 491 (514)
Q Consensus 444 ~~~l~~~~~~~--~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~ 491 (514)
++.++++++.+ ++||++.|||. ++++.+++++||+ +|.++++++.
T Consensus 276 ~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd---~V~igr~~l~ 323 (336)
T 1f76_A 276 TEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGAS---LVQIYSGFIF 323 (336)
T ss_dssp HHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCS---EEEESHHHHH
T ss_pred HHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCC---EEEeeHHHHh
Confidence 46777888777 89999999996 8999999999999 9999999873
No 213
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=97.16 E-value=0.02 Score=53.16 Aligned_cols=147 Identities=14% Similarity=0.124 Sum_probs=94.6
Q ss_pred HHHHHHHhCCCCEEEEEcC------CCCHHHHHHHHHHHHHHHhhcCceEEE--c-----------------CcHHHHHh
Q 010240 322 DAVKAALEGGATIIQLREK------DADTRGFLEAAKACLQICCVHGVPLLI--N-----------------DRIDIALA 376 (514)
Q Consensus 322 ~~~~~~~~~Gv~~v~lr~~------~~~~~~~~~~~~~~~~~~~~~~~~l~v--~-----------------~~~~~a~~ 376 (514)
+-+..+.++|++=|+|-.. +++... ++.++ +..++++.+ . .+++.+.+
T Consensus 12 ~~a~~A~~~GAdRIELc~~L~~GGlTPS~g~----i~~~~---~~~~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~ 84 (256)
T 1twd_A 12 ECALTAQQNGADRVELCAAPKEGGLTPSLGV----LKSVR---QRVTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRE 84 (256)
T ss_dssp HHHHHHHHTTCSEEEECBCGGGTCBCCCHHH----HHHHH---HHCCSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEcCCcccCCCCCCHHH----HHHHH---HHcCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHH
Confidence 3466788999999999653 344332 22222 233555543 1 24667889
Q ss_pred CCCCeEEeCCCC----CCHHHHHhhcC--CCcEEEEecC-------CHHH-HHHhhhCCCcEEEeccccCCCCCCCCccC
Q 010240 377 CDADGVHLGQSD----MPARTARALLG--PDKIIGVSCK-------TPEE-AHQAWIDGANYIGCGGVYPTNTKANNLTV 442 (514)
Q Consensus 377 ~ga~gvhl~~~~----~~~~~~~~~~~--~~~~ig~s~~-------~~~e-~~~a~~~g~d~v~~~~vf~t~~k~~~~~~ 442 (514)
+|++|+.++.-+ .+....++... .+.- +..| ++.+ +....++|+|-|+.|---+ ...-
T Consensus 85 ~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~~~--vTFHRAfD~~~d~~~ale~L~~lG~~rILTSG~~~------~a~~ 156 (256)
T 1twd_A 85 LGFPGLVTGVLDVDGNVDMPRMEKIMAAAGPLA--VTFHRAFDMCANPLYTLNNLAELGIARVLTSGQKS------DALQ 156 (256)
T ss_dssp TTCSEEEECCBCTTSSBCHHHHHHHHHHHTTSE--EEECGGGGGCSCHHHHHHHHHHHTCCEEEECTTSS------STTT
T ss_pred cCCCEEEEeeECCCCCcCHHHHHHHHHHhCCCc--EEEECchhccCCHHHHHHHHHHcCCCEEECCCCCC------CHHH
Confidence 999999998744 23332222211 1222 2333 5565 4556688999998764322 2235
Q ss_pred CHHHHHHHHHcC-CCCEEEECCCCcccHHHHHHCCCCCCceEEEe
Q 010240 443 GLDGLKTVCLAS-KLPVVAIGGIGISNASDVMKIGVSNLKGVAVV 486 (514)
Q Consensus 443 g~~~l~~~~~~~-~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~ 486 (514)
|++.|+++.+.. .+-|++-|||+++|+..++.+|+. -+=.+
T Consensus 157 g~~~L~~Lv~~a~~i~Im~GgGv~~~Ni~~l~~tGv~---e~H~S 198 (256)
T 1twd_A 157 GLSKIMELIAHRDAPIIMAGAGVRAENLHHFLDAGVL---EVHSS 198 (256)
T ss_dssp THHHHHHHHTSSSCCEEEEESSCCTTTHHHHHHHTCS---EEEEC
T ss_pred HHHHHHHHHHhhCCcEEEecCCcCHHHHHHHHHcCCC---eEeEC
Confidence 899999998754 677999999999999999999988 66644
No 214
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.15 E-value=0.0028 Score=66.17 Aligned_cols=84 Identities=14% Similarity=0.084 Sum_probs=59.0
Q ss_pred EEEecCCHHHHHHhhhCCCcEEEeccccCCCC--CCCCccC---CHHHHHHHHHc---C------CCCEEEECCCC-ccc
Q 010240 404 IGVSCKTPEEAHQAWIDGANYIGCGGVYPTNT--KANNLTV---GLDGLKTVCLA---S------KLPVVAIGGIG-ISN 468 (514)
Q Consensus 404 ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~--k~~~~~~---g~~~l~~~~~~---~------~~pv~a~GGi~-~~~ 468 (514)
+.-.+.+.++++.+.+.|+|++.+| +-++.- ....... .+..+.++.+. . ++||+|.|||. +.+
T Consensus 288 i~G~V~t~~~a~~l~~aGad~I~Vg-~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~d 366 (503)
T 1me8_A 288 GAGNIVDGEGFRYLADAGADFIKIG-IGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYH 366 (503)
T ss_dssp EEEEECSHHHHHHHHHHTCSEEEEC-SSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHH
T ss_pred eeccccCHHHHHHHHHhCCCeEEec-ccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHH
Confidence 3445778899999999999999873 333210 1111111 23444444432 2 69999999996 899
Q ss_pred HHHHHHCCCCCCceEEEeecccC
Q 010240 469 ASDVMKIGVSNLKGVAVVSALFD 491 (514)
Q Consensus 469 ~~~~~~~Ga~~~~gva~~~~i~~ 491 (514)
+..++++||+ +|.+|+.|..
T Consensus 367 i~kAlalGA~---~V~iG~~~~~ 386 (503)
T 1me8_A 367 MTLALAMGAD---FIMLGRYFAR 386 (503)
T ss_dssp HHHHHHTTCS---EEEESHHHHT
T ss_pred HHHHHHcCCC---EEEECchhhc
Confidence 9999999999 9999999964
No 215
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=97.15 E-value=0.00064 Score=81.42 Aligned_cols=170 Identities=14% Similarity=-0.011 Sum_probs=108.7
Q ss_pred HHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHH---hhcCceEEEc-Cc--------HHHHHhCCCCe--EEeC
Q 010240 320 ITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQIC---CVHGVPLLIN-DR--------IDIALACDADG--VHLG 385 (514)
Q Consensus 320 ~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~---~~~~~~l~v~-~~--------~~~a~~~ga~g--vhl~ 385 (514)
..+.+.++.++|.-.+.=-....+.+++.+.++++++.. ..+++.+++. .+ ++.+.+.|+.. |.++
T Consensus 596 ~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~~vk~~~~~~~p~gvN~~~~~p~~~~~~~~~~~~~~~~gv~i~gv~~~ 675 (2060)
T 2uva_G 596 PWDFVAATMNAGYHIELAGGGYYNAQKMSDAISKIEKAIPPGRGITVNLIYVNPRAMGWQIPLLGRLRADGVPIEGLTIG 675 (2060)
T ss_dssp SHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHHHHGGGSCTTCCEEEEEETTCTTHHHHHHHHHHHHHTTTCCEEEEEEE
T ss_pred cHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHHHHHhhcccCCCeEecccccCcccchhHHHHHHHHHHcCCCcceEeec
Confidence 456666777777433321334567777777777776654 3345555552 22 35677888887 8877
Q ss_pred CCCCCHHHH-HhhcCCCcEEEEecCCHHHHHHh----hhCCCcEEE---eccccCCCCCCCCc---cCCHHHHHHHHHcC
Q 010240 386 QSDMPARTA-RALLGPDKIIGVSCKTPEEAHQA----WIDGANYIG---CGGVYPTNTKANNL---TVGLDGLKTVCLAS 454 (514)
Q Consensus 386 ~~~~~~~~~-~~~~~~~~~ig~s~~~~~e~~~a----~~~g~d~v~---~~~vf~t~~k~~~~---~~g~~~l~~~~~~~ 454 (514)
...+...++ ......+..+...+.+..++.++ .+.|+|.++ +-.. ....|.+.. ..-+..+.++++..
T Consensus 676 ~G~p~~e~~~~~l~~~gi~~i~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~-eaGGH~g~~d~~~~~l~lv~~i~~~~ 754 (2060)
T 2uva_G 676 AGVPSIEVANEYIQTLGIRHISFKPGSVDAIQQVINIAKANPTFPIILQWTGG-RGGGHHSFEDFHQPILLMYSRIRKCS 754 (2060)
T ss_dssp SSCCCHHHHHHHHHHSCCSEEEECCCSHHHHHHHHHHHHHCTTSCEEEEECCT-TSSSSCCSCCSHHHHHHHHHHHHTST
T ss_pred CCCCCHHHHHHHHHHcCCeEEEecCCHHHHHHHHHHHHHcCCCEEEEeeeEcc-cCCCCCCcccccchHHHHHHHHHHHc
Confidence 776554221 11112233333556677777777 899999997 3111 111121111 11246788888888
Q ss_pred CCCEEEECCCC-cccHHHHH-----------HCCCCCCceEEEeecccCCC
Q 010240 455 KLPVVAIGGIG-ISNASDVM-----------KIGVSNLKGVAVVSALFDRE 493 (514)
Q Consensus 455 ~~pv~a~GGi~-~~~~~~~~-----------~~Ga~~~~gva~~~~i~~~~ 493 (514)
++||+|.|||. .+.+..++ .+||+ ||.+|+.|+.++
T Consensus 755 ~ipviaaGGI~~g~~i~aaltg~ws~~~g~palGAd---gV~~GT~f~~t~ 802 (2060)
T 2uva_G 755 NIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFD---GCMFGSRMMTAK 802 (2060)
T ss_dssp TEEEEEESSCCSHHHHHHHHHTCGGGTTTSCCCCCS---CEEESGGGGGBT
T ss_pred CCCEEEeCCCCCHHHHHHHhcCcchhhcCCCCCCCC---EEEEchhhhcCc
Confidence 99999999996 78999999 99999 999999999543
No 216
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=97.12 E-value=0.00069 Score=63.86 Aligned_cols=78 Identities=18% Similarity=0.207 Sum_probs=61.3
Q ss_pred HHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecc
Q 010240 411 PEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSAL 489 (514)
Q Consensus 411 ~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i 489 (514)
.+-++.+.+.|+|++.+.-.-.... .....++.++++++.+++||++-|||. ++++..+++.||+ +|.+++.+
T Consensus 38 ~~~a~~~~~~G~~~i~v~d~~~~~~---~~~~~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~Gad---~V~ig~~~ 111 (247)
T 3tdn_A 38 RDWVVEVEKRGAGEILLTSIDRDGT---KSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGAD---KVSINTAA 111 (247)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTC---SSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCS---EECCSHHH
T ss_pred HHHHHHHHHcCCCEEEEEecCcccC---CCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCC---eeehhhHH
Confidence 4557777899999997654322211 123468899999998999999999997 7899999999999 99999998
Q ss_pred cCCCC
Q 010240 490 FDREC 494 (514)
Q Consensus 490 ~~~~~ 494 (514)
+..++
T Consensus 112 l~dp~ 116 (247)
T 3tdn_A 112 VENPS 116 (247)
T ss_dssp HHCTH
T ss_pred hhChH
Confidence 86544
No 217
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=97.11 E-value=0.0076 Score=55.85 Aligned_cols=80 Identities=9% Similarity=-0.021 Sum_probs=54.2
Q ss_pred HHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCC-CEEEECCCCcc--cHHHHHHCCCCCCceEEEeeccc
Q 010240 414 AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKL-PVVAIGGIGIS--NASDVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 414 ~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~-pv~a~GGi~~~--~~~~~~~~Ga~~~~gva~~~~i~ 490 (514)
+..+.+.|+|-+.+|. .-.+.++.+++.++- -.+..+||.+. +. +++++|++ .+.+||+|+
T Consensus 143 a~~a~~~G~~GvV~~a------------t~~~e~~~ir~~~~~~~~iv~PGI~~~g~~p-~~~~aGad---~iVvGr~I~ 206 (228)
T 3m47_A 143 ARMGVDLGVKNYVGPS------------TRPERLSRLREIIGQDSFLISPGVGAQGGDP-GETLRFAD---AIIVGRSIY 206 (228)
T ss_dssp HHHHHHTTCCEEECCS------------SCHHHHHHHHHHHCSSSEEEECC----------CGGGTCS---EEEECHHHH
T ss_pred HHHHHHhCCcEEEECC------------CChHHHHHHHHhcCCCCEEEecCcCcCCCCH-hHHHcCCC---EEEECHHHh
Confidence 4566788998876654 124556667665532 34478899876 77 88899999 999999999
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q 010240 491 DRECILPESKKLHAVLMDA 509 (514)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~ 509 (514)
+++||.+.++++++.+++.
T Consensus 207 ~a~dp~~a~~~~~~~~~~~ 225 (228)
T 3m47_A 207 LADNPAAAAAGAIESIKDL 225 (228)
T ss_dssp TSSCHHHHHHHHHHHC---
T ss_pred CCCCHHHHHHHHHHHHHHH
Confidence 9999999999999988764
No 218
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.10 E-value=0.0023 Score=66.71 Aligned_cols=119 Identities=16% Similarity=0.153 Sum_probs=76.8
Q ss_pred HHHHHhCCCCeEEeCCC--CCC-----HHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEecccc----CCCCCCCC
Q 010240 371 IDIALACDADGVHLGQS--DMP-----ARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVY----PTNTKANN 439 (514)
Q Consensus 371 ~~~a~~~ga~gvhl~~~--~~~-----~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf----~t~~k~~~ 439 (514)
.+.+.+.|+|.+.+... +.. ...++...+.-.+++-.+.+.+.+..+.++|+|+|.+|--+ .|....+.
T Consensus 238 a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~~p~~pvi~G~v~t~~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~ 317 (491)
T 1zfj_A 238 AEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVGIGPGSICTTRVVAGV 317 (491)
T ss_dssp HHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHCSSSCEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTBCHHHHTCC
T ss_pred HHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHHCCCCcEeCCCccCHHHHHHHHHcCCCEEEECccCCcceEEeeecCC
Confidence 44455667776655432 111 22334444223344567789999999999999999886211 01000011
Q ss_pred ccCCHHHHHHHHH---cCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccCC
Q 010240 440 LTVGLDGLKTVCL---ASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFDR 492 (514)
Q Consensus 440 ~~~g~~~l~~~~~---~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~ 492 (514)
....++.++++.. ..++||+|.|||. .+++.+++++||+ +|.+|++|...
T Consensus 318 ~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~~GA~---~v~vG~~~~~~ 371 (491)
T 1zfj_A 318 GVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGN---AVMLGSMFAGT 371 (491)
T ss_dssp CCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCS---EEEESTTTTTB
T ss_pred CCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHHcCCc---ceeeCHHhhCC
Confidence 1123455566654 3589999999996 8999999999999 99999999843
No 219
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=97.08 E-value=0.0044 Score=56.93 Aligned_cols=149 Identities=15% Similarity=0.123 Sum_probs=92.0
Q ss_pred CCceEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcC-----CCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHH
Q 010240 300 SDLFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREK-----DADTRGFLEAAKACLQICCVHGVPLLINDRIDIA 374 (514)
Q Consensus 300 ~~~~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a 374 (514)
.+.++-.++.-++-....+.-..-++.+++.|++-|-+-.+ +.+.++..+.+.++.+.|.+..+++++..-.
T Consensus 53 ~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~--- 129 (220)
T 1ub3_A 53 APFRLVTVVGFPLGYQEKEVKALEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGY--- 129 (220)
T ss_dssp CSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGG---
T ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCC---
Confidence 34666666643321100122345577899999998877554 4567777777888888887666677774321
Q ss_pred HhCCCCeEEeCCCCCCHHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC
Q 010240 375 LACDADGVHLGQSDMPARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS 454 (514)
Q Consensus 375 ~~~ga~gvhl~~~~~~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~ 454 (514)
+...++. .-++.+.++|+|||=.+.-|.+ .++..-..+.+++.. ..
T Consensus 130 --------------l~~e~i~----------------~a~~ia~eaGADfVKTsTGf~~---~gat~~dv~~m~~~v-g~ 175 (220)
T 1ub3_A 130 --------------FSPEEIA----------------RLAEAAIRGGADFLKTSTGFGP---RGASLEDVALLVRVA-QG 175 (220)
T ss_dssp --------------SCHHHHH----------------HHHHHHHHHTCSEEECCCSSSS---CCCCHHHHHHHHHHH-TT
T ss_pred --------------CCHHHHH----------------HHHHHHHHhCCCEEEeCCCCCC---CCCCHHHHHHHHHhh-CC
Confidence 0111221 1256677899999955543331 223222334444443 35
Q ss_pred CCCEEEECCCC-cccHHHHHHCCCCCCceEEEeec
Q 010240 455 KLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSA 488 (514)
Q Consensus 455 ~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~ 488 (514)
++||-+.|||. .+++.+++++|+. -++..+.
T Consensus 176 ~v~VkaaGGirt~~~al~~i~aGa~---RiG~S~g 207 (220)
T 1ub3_A 176 RAQVKAAGGIRDRETALRMLKAGAS---RLGTSSG 207 (220)
T ss_dssp SSEEEEESSCCSHHHHHHHHHTTCS---EEEETTH
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCc---ccchhHH
Confidence 89999999997 6778889999999 7777543
No 220
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=97.05 E-value=0.0013 Score=65.96 Aligned_cols=81 Identities=10% Similarity=-0.056 Sum_probs=57.7
Q ss_pred HHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCcccHHHHHHCC-CCCCceEEEeecccCC
Q 010240 414 AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGISNASDVMKIG-VSNLKGVAVVSALFDR 492 (514)
Q Consensus 414 ~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~~~~~~~~~~G-a~~~~gva~~~~i~~~ 492 (514)
++.+.+.|+||+-++.-......+.. ..++.++++++.+++||++.|||+++++.++++.| ++ +|+++++++..
T Consensus 262 a~~le~~Gvd~i~v~~~~~~~~~~~~--~~~~~~~~vr~~~~iPvi~~G~i~~~~a~~~l~~g~aD---~V~~gR~~l~~ 336 (376)
T 1icp_A 262 VESLNKYDLAYCHVVEPRMKTAWEKI--ECTESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRAD---LVAYGRLFISN 336 (376)
T ss_dssp HHHHGGGCCSEEEEECCSCCC--------CCCCSHHHHHHCCSCEEEESSCCHHHHHHHHHTTSCS---EEEESHHHHHC
T ss_pred HHHHHHcCCCEEEEcCCcccCCCCcc--ccHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHCCCCc---EEeecHHHHhC
Confidence 55666899999977431110111111 13455677888889999999999999999999988 88 99999999987
Q ss_pred CCHHHHH
Q 010240 493 ECILPES 499 (514)
Q Consensus 493 ~~~~~~~ 499 (514)
++....+
T Consensus 337 P~l~~k~ 343 (376)
T 1icp_A 337 PDLPKRF 343 (376)
T ss_dssp TTHHHHH
T ss_pred ccHHHHH
Confidence 7655443
No 221
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=97.03 E-value=0.00052 Score=64.67 Aligned_cols=62 Identities=10% Similarity=0.027 Sum_probs=51.1
Q ss_pred HHHHHHcC-CCCEEEECCCCcc-----------cHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHHhh
Q 010240 447 LKTVCLAS-KLPVVAIGGIGIS-----------NASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDAVQ 511 (514)
Q Consensus 447 l~~~~~~~-~~pv~a~GGi~~~-----------~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~~~ 511 (514)
++++++.+ ..++...|||+++ ++.+++++|++ .+.+||+|++++||.++++++++.+++..+
T Consensus 167 i~~lr~~~~~~~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aGad---~iVvGr~I~~a~dp~~a~~~l~~~i~~~~~ 240 (246)
T 2yyu_A 167 AAFIKERCGASFLAVTPGIRFADDAAHDQVRVVTPRKARALGSD---YIVIGRSLTRAADPLRTYARLQHEWNGGER 240 (246)
T ss_dssp HHHHHHHHCTTSEEEECCCCCCC-------CCCCHHHHHHHTCS---EEEECHHHHTSSSHHHHHHHHHHHCC----
T ss_pred HHHHHHhcCCCCEEEeCCcCCCCCCcccccccCCHHHHHHcCCC---EEEECHhhcCCCCHHHHHHHHHHHHHHHHh
Confidence 55565544 3569999999999 99999999999 999999999999999999999988776544
No 222
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=96.91 E-value=0.0013 Score=64.44 Aligned_cols=78 Identities=15% Similarity=0.157 Sum_probs=58.3
Q ss_pred HHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCC-CcccHHHHHH-CCCCCCceEEEeecc
Q 010240 412 EEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGI-GISNASDVMK-IGVSNLKGVAVVSAL 489 (514)
Q Consensus 412 ~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi-~~~~~~~~~~-~Ga~~~~gva~~~~i 489 (514)
+.+..+.+.|+|+|.++.-...+.. ..+..++.++++++ ++||++.||| +++++.++++ .|++ +|.+|+++
T Consensus 144 ~~a~~l~~~G~d~i~v~g~~~~~~~--~~~~~~~~i~~i~~--~ipVi~~GgI~s~~da~~~l~~~gad---~V~iGR~~ 216 (318)
T 1vhn_A 144 EIYRILVEEGVDEVFIHTRTVVQSF--TGRAEWKALSVLEK--RIPTFVSGDIFTPEDAKRALEESGCD---GLLVARGA 216 (318)
T ss_dssp HHHHHHHHTTCCEEEEESSCTTTTT--SSCCCGGGGGGSCC--SSCEEEESSCCSHHHHHHHHHHHCCS---EEEESGGG
T ss_pred HHHHHHHHhCCCEEEEcCCCccccC--CCCcCHHHHHHHHc--CCeEEEECCcCCHHHHHHHHHcCCCC---EEEECHHH
Confidence 5678888999999988543221110 12235677777766 8999999999 6899999998 7999 99999998
Q ss_pred cCCCCHH
Q 010240 490 FDRECIL 496 (514)
Q Consensus 490 ~~~~~~~ 496 (514)
+..++..
T Consensus 217 l~~P~l~ 223 (318)
T 1vhn_A 217 IGRPWIF 223 (318)
T ss_dssp TTCTTHH
T ss_pred HhCcchH
Confidence 8655543
No 223
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=96.86 E-value=0.0023 Score=63.56 Aligned_cols=80 Identities=15% Similarity=0.129 Sum_probs=55.9
Q ss_pred CCHHHHHHhhhCCCcEEEeccccCCCC------C--C-----CCccCCHHHHHHHHHcC-CCCEEEECCCC-cccHHHHH
Q 010240 409 KTPEEAHQAWIDGANYIGCGGVYPTNT------K--A-----NNLTVGLDGLKTVCLAS-KLPVVAIGGIG-ISNASDVM 473 (514)
Q Consensus 409 ~~~~e~~~a~~~g~d~v~~~~vf~t~~------k--~-----~~~~~g~~~l~~~~~~~-~~pv~a~GGi~-~~~~~~~~ 473 (514)
.++++++.+.+.|+|+|.++.-.-|.- + + +......+.+.++.... ++||++.|||. ..++.+++
T Consensus 218 ~s~e~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~~~~~ipvia~GGI~~g~Dv~KaL 297 (365)
T 3sr7_A 218 MDVKTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQPLMDKVEILASGGIRHPLDIIKAL 297 (365)
T ss_dssp CCHHHHHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHHHHHGGGTTTSEEEECSSCCSHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHHHHHHhcCCCeEEEeCCCCCHHHHHHHH
Confidence 578899999999999998853222110 0 0 00111234555543332 78999999996 88999999
Q ss_pred HCCCCCCceEEEeecccC
Q 010240 474 KIGVSNLKGVAVVSALFD 491 (514)
Q Consensus 474 ~~Ga~~~~gva~~~~i~~ 491 (514)
.+||+ +|.+++.++.
T Consensus 298 alGAd---aV~ig~~~l~ 312 (365)
T 3sr7_A 298 VLGAK---AVGLSRTMLE 312 (365)
T ss_dssp HHTCS---EEEESHHHHH
T ss_pred HcCCC---EEEECHHHHH
Confidence 99999 9999999873
No 224
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=96.86 E-value=0.0038 Score=60.71 Aligned_cols=143 Identities=14% Similarity=0.147 Sum_probs=85.2
Q ss_pred HHHHHhCCCCEEEEEcC---CCCH---HHHHHHHHHHHHHHhhcCceEEEcC--cHHHHHhCCCCeEEeCCCCCCHHHHH
Q 010240 324 VKAALEGGATIIQLREK---DADT---RGFLEAAKACLQICCVHGVPLLIND--RIDIALACDADGVHLGQSDMPARTAR 395 (514)
Q Consensus 324 ~~~~~~~Gv~~v~lr~~---~~~~---~~~~~~~~~~~~~~~~~~~~l~v~~--~~~~a~~~ga~gvhl~~~~~~~~~~~ 395 (514)
++.+++.|++.|-+-.. +-++ .+..+.+.++...|+++|.++++.- +.. + .+ ........
T Consensus 116 ve~a~~~GADAVk~lv~~g~d~~~e~~~~q~~~l~rv~~ec~~~GiPlllEil~y~~-----~-----~~-~~~~~~~a- 183 (332)
T 3iv3_A 116 IKRLKEAGADAVKFLLYYDVDGDPQVNVQKQAYIERIGSECQAEDIPFFLEILTYDE-----T-----IS-NNSSVEFA- 183 (332)
T ss_dssp HHHHHHTTCSEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECBT-----T-----BS-CTTSHHHH-
T ss_pred HHHHHHcCCCEEEEEEEcCCCchHHHHHHHHHHHHHHHHHHHHcCCceEEEEeccCC-----C-----CC-CCcchhhh-
Confidence 67788889776655332 2222 1456677888899999999988732 211 0 00 11111111
Q ss_pred hhcCCCcEEEEecCCHHHHHHh--hhCCCcEEEeccccCCCCCC---CC----ccCC----HHHHHHHHHcCCCCEE-EE
Q 010240 396 ALLGPDKIIGVSCKTPEEAHQA--WIDGANYIGCGGVYPTNTKA---NN----LTVG----LDGLKTVCLASKLPVV-AI 461 (514)
Q Consensus 396 ~~~~~~~~ig~s~~~~~e~~~a--~~~g~d~v~~~~vf~t~~k~---~~----~~~g----~~~l~~~~~~~~~pv~-a~ 461 (514)
+. .+..+ .+-++.+ .+.|+|.+ ++..+.+.. +. .... .+.|+++.+.+++|++ ..
T Consensus 184 ~~-~p~~V-------~~a~R~~~~~elGaDv~---Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~~P~v~ls 252 (332)
T 3iv3_A 184 KV-KVHKV-------NDAMKVFSAERFGIDVL---KVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTDLPYIYLS 252 (332)
T ss_dssp TT-HHHHH-------HHHHHHHTSGGGCCSEE---EECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCSSCEEEEC
T ss_pred cc-CHHHH-------HHHHHHHhhcCcCCcEE---EEecCCChhhhcccccccccccHHHHHHHHHHHHhcCCCCEEEEC
Confidence 00 01111 2235555 57899999 665543321 00 0001 1458888888899965 67
Q ss_pred CCCCcc----cHHHHHHCCC--CCCceEEEeecccCC
Q 010240 462 GGIGIS----NASDVMKIGV--SNLKGVAVVSALFDR 492 (514)
Q Consensus 462 GGi~~~----~~~~~~~~Ga--~~~~gva~~~~i~~~ 492 (514)
||.+.+ .+..++++|+ . ||++|+++|+.
T Consensus 253 gG~~~~~fl~~v~~A~~aGa~f~---Gv~~GRnvwq~ 286 (332)
T 3iv3_A 253 AGVSAELFQETLVFAHKAGAKFN---GVLCGRATWAG 286 (332)
T ss_dssp TTCCHHHHHHHHHHHHHHTCCCC---EEEECHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHcCCCcc---eEEeeHHHHHh
Confidence 898754 3566778999 9 99999999975
No 225
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=96.85 E-value=0.00099 Score=62.44 Aligned_cols=61 Identities=16% Similarity=0.096 Sum_probs=52.7
Q ss_pred HHHHHHHHcC-CCCEEEECCCCcccH-----------HHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHH
Q 010240 445 DGLKTVCLAS-KLPVVAIGGIGISNA-----------SDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMD 508 (514)
Q Consensus 445 ~~l~~~~~~~-~~pv~a~GGi~~~~~-----------~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~ 508 (514)
+.++++++.. +.++...|||++++. .+++++|++ .+.+||+|++++||.++++++++.+++
T Consensus 164 ~~i~~lr~~~~~~~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aGad---~iVvGr~I~~a~dp~~a~~~l~~~i~~ 236 (239)
T 1dbt_A 164 HEAKAIYQAVSPSFLTVTPGIRMSEDAANDQVRVATPAIAREKGSS---AIVVGRSITKAEDPVKAYKAVRLEWEG 236 (239)
T ss_dssp GGHHHHTTTSCTTCEEEECCBCCTTSCCTTCSSCBCHHHHHHTTCS---EEEECHHHHTSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCcEEEeCCcCCCCCCccceeccCCHHHHHHcCCC---EEEEChhhcCCCCHHHHHHHHHHHHHH
Confidence 4556666655 468999999999988 899999999 999999999999999999999988763
No 226
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=96.79 E-value=0.0087 Score=54.49 Aligned_cols=161 Identities=13% Similarity=0.112 Sum_probs=93.0
Q ss_pred HHHhCCCCEEEEEcC------CCCHHHHHHHHHHHHHHHhhcCceEEE--c-----------------CcHHHHHhCCCC
Q 010240 326 AALEGGATIIQLREK------DADTRGFLEAAKACLQICCVHGVPLLI--N-----------------DRIDIALACDAD 380 (514)
Q Consensus 326 ~~~~~Gv~~v~lr~~------~~~~~~~~~~~~~~~~~~~~~~~~l~v--~-----------------~~~~~a~~~ga~ 380 (514)
.+.++|++=|+|-.. +++...+ +.++ .+ |+..++++.+ . .+++.+.++|++
T Consensus 16 ~A~~~GAdRIELc~~L~~GGlTPS~g~i-~~~~--~~-~~~~~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~Gad 91 (224)
T 2bdq_A 16 RLDKAIISRVELCDNLAVGGTTPSYGVI-KEAN--QY-LHEKGISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESD 91 (224)
T ss_dssp GCCTTTCCEEEEEBCGGGTCBCCCHHHH-HHHH--HH-HHHTTCEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHcCCCEEEEcCCcccCCcCCCHHHH-HHHH--Hh-hhhcCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCC
Confidence 456788888888653 3443322 2111 11 3455566543 1 246678899999
Q ss_pred eEEeCCCC----CCHHHHHhh----cCCCcEEEE---ec--CCHHH-HHHhhhCCCcEEEeccccCCCCCCCCccCCHHH
Q 010240 381 GVHLGQSD----MPARTARAL----LGPDKIIGV---SC--KTPEE-AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDG 446 (514)
Q Consensus 381 gvhl~~~~----~~~~~~~~~----~~~~~~ig~---s~--~~~~e-~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~ 446 (514)
|+.++.-+ .+....++. .+.....=. -| .++.+ +....++|+|-|+.|---++. ...-|++.
T Consensus 92 GvV~G~Lt~dg~iD~~~~~~Li~~a~~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rILTSG~~~~~----~a~~g~~~ 167 (224)
T 2bdq_A 92 ALVLGILTSNNHIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRILLHGSSNGE----PIIENIKH 167 (224)
T ss_dssp EEEECCBCTTSSBCHHHHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEEECSCSSCC----CGGGGHHH
T ss_pred EEEEeeECCCCCcCHHHHHHHHHHhCCCeEEEECchhccCCcCHHHHHHHHHHcCCCEEECCCCCCCC----cHHHHHHH
Confidence 99998743 233322222 121211100 02 34444 555668999999876533321 12358899
Q ss_pred HHHHHHcC--CCCEEEECCCCcccHHHHH-HCCCCCCceEEEeecccCCCCHHH
Q 010240 447 LKTVCLAS--KLPVVAIGGIGISNASDVM-KIGVSNLKGVAVVSALFDRECILP 497 (514)
Q Consensus 447 l~~~~~~~--~~pv~a~GGi~~~~~~~~~-~~Ga~~~~gva~~~~i~~~~~~~~ 497 (514)
|+++.+.. .+-|++-|||+++|+..++ .+|+. -+=...-+..+.+|.+
T Consensus 168 L~~Lv~~a~~ri~Im~GgGV~~~Ni~~l~~~tGv~---e~H~s~i~~~~~~~~~ 218 (224)
T 2bdq_A 168 IKALVEYANNRIEIMVGGGVTAENYQYICQETGVK---QAHGTRITQMAGDPLE 218 (224)
T ss_dssp HHHHHHHHTTSSEEEECSSCCTTTHHHHHHHHTCC---EEEETTCC--------
T ss_pred HHHHHHhhCCCeEEEeCCCCCHHHHHHHHHhhCCC---EEccccccCCCCCcch
Confidence 99997754 5779999999999999998 58998 7775544445555543
No 227
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.76 E-value=0.0039 Score=70.95 Aligned_cols=61 Identities=28% Similarity=0.367 Sum_probs=47.3
Q ss_pred HHHHHHHHHcC-CCCEEEECCC-CcccHHHHHHCCCCCCceEEEeecccC-CCC-HHHHHHHHHHHHH
Q 010240 444 LDGLKTVCLAS-KLPVVAIGGI-GISNASDVMKIGVSNLKGVAVVSALFD-REC-ILPESKKLHAVLM 507 (514)
Q Consensus 444 ~~~l~~~~~~~-~~pv~a~GGi-~~~~~~~~~~~Ga~~~~gva~~~~i~~-~~~-~~~~~~~~~~~~~ 507 (514)
++.+.++++.+ ++||++.||| +.+++.+++.+||+ +|.++++++. ..+ .....+.+...+.
T Consensus 775 ~~~v~~v~~~~~~ipvi~~GGI~s~~da~~~l~~Ga~---~v~vg~~~l~~~~~~~~~~~~~l~~~l~ 839 (1025)
T 1gte_A 775 LRAVTTIARALPGFPILATGGIDSAESGLQFLHSGAS---VLQVCSAVQNQDFTVIQDYCTGLKALLY 839 (1025)
T ss_dssp HHHHHHHHHHSTTCCEEEESSCCSHHHHHHHHHTTCS---EEEESHHHHTSCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEecCcCCHHHHHHHHHcCCC---EEEEeeccccCCccHHHHHHHHHHHHHH
Confidence 46788888888 8999999999 58999999999999 9999999985 333 3344444544444
No 228
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=96.76 E-value=0.0077 Score=55.67 Aligned_cols=145 Identities=17% Similarity=0.171 Sum_probs=88.7
Q ss_pred CCceEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcC-----CCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHH
Q 010240 300 SDLFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREK-----DADTRGFLEAAKACLQICCVHGVPLLINDRIDIA 374 (514)
Q Consensus 300 ~~~~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a 374 (514)
++.++-.++.-++-....+.-..-++.+++.|++-|.+-.+ +.+.+...+.++.+.+.|...-+++|+...
T Consensus 77 s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~---- 152 (239)
T 3ngj_A 77 TGVKVCTVIGFPLGATPSEVKAYETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECC---- 152 (239)
T ss_dssp SSCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGG----
T ss_pred CCCeEEEEeccCCCCCchHHHHHHHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecC----
Confidence 45666666654332100112233456688999998887554 456666777777787777543344555220
Q ss_pred HhCCCCeEEeCCCCCCHHHHHhhcCCCcEEEEecCCHHH----HHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHH
Q 010240 375 LACDADGVHLGQSDMPARTARALLGPDKIIGVSCKTPEE----AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTV 450 (514)
Q Consensus 375 ~~~ga~gvhl~~~~~~~~~~~~~~~~~~~ig~s~~~~~e----~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~ 450 (514)
.+ |.+| ++.+.+.|+|||=.|.-|. ..++.....+.+++.
T Consensus 153 -------------~L--------------------t~eei~~a~~ia~~aGADfVKTSTGf~---~ggAt~~dv~lmr~~ 196 (239)
T 3ngj_A 153 -------------YL--------------------TNEEKVEVCKRCVAAGAEYVKTSTGFG---THGATPEDVKLMKDT 196 (239)
T ss_dssp -------------GS--------------------CHHHHHHHHHHHHHHTCSEEECCCSSS---SCCCCHHHHHHHHHH
T ss_pred -------------CC--------------------CHHHHHHHHHHHHHHCcCEEECCCCCC---CCCCCHHHHHHHHHh
Confidence 00 2333 3445789999996665443 122332233444444
Q ss_pred HHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEeec
Q 010240 451 CLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSA 488 (514)
Q Consensus 451 ~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~ 488 (514)
.. .+++|-|.|||. .+++.+++++||+ -++..+.
T Consensus 197 vg-~~v~VKasGGIrt~~da~~~i~aGA~---riGtS~~ 231 (239)
T 3ngj_A 197 VG-DKALVKAAGGIRTFDDAMKMINNGAS---RIGASAG 231 (239)
T ss_dssp HG-GGSEEEEESSCCSHHHHHHHHHTTEE---EEEESCH
T ss_pred hC-CCceEEEeCCCCCHHHHHHHHHhccc---ceecccH
Confidence 32 379999999997 6889999999999 8887664
No 229
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=96.67 E-value=0.005 Score=57.96 Aligned_cols=80 Identities=14% Similarity=0.033 Sum_probs=60.2
Q ss_pred HHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCcc-----------cHHHHHHCCCCCCce
Q 010240 414 AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGIS-----------NASDVMKIGVSNLKG 482 (514)
Q Consensus 414 ~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~~-----------~~~~~~~~Ga~~~~g 482 (514)
++.+.+.|+|-++.+| .-...+++... +-.++...||.+. +..+++++|++ .
T Consensus 150 A~~a~~~G~dGvV~s~------------~e~~~ir~~~~--~~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad---~ 212 (259)
T 3tfx_A 150 AKMAKHSGADGVICSP------------LEVKKLHENIG--DDFLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSS---A 212 (259)
T ss_dssp HHHHHHTTCCEEECCG------------GGHHHHHHHHC--SSSEEEECCCCCC-----------CHHHHHHTTCS---E
T ss_pred HHHHHHhCCCEEEECH------------HHHHHHHhhcC--CccEEEcCCcCCCCCCcCCccccCCHHHHHHcCCC---E
Confidence 3445677888776653 12334444332 3447788999875 48899999999 9
Q ss_pred EEEeecccCCCCHHHHHHHHHHHHHHHh
Q 010240 483 VAVVSALFDRECILPESKKLHAVLMDAV 510 (514)
Q Consensus 483 va~~~~i~~~~~~~~~~~~~~~~~~~~~ 510 (514)
+.+||+|++++||.++++++++.++++.
T Consensus 213 iVvGr~I~~a~dp~~a~~~i~~~~~~~~ 240 (259)
T 3tfx_A 213 IVVGRPITLASDPKAAYEAIKKEFNAEN 240 (259)
T ss_dssp EEECHHHHTSSSHHHHHHHHHHHHTCTT
T ss_pred EEEChHHhCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987764
No 230
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=96.67 E-value=0.0021 Score=76.68 Aligned_cols=168 Identities=13% Similarity=0.046 Sum_probs=106.4
Q ss_pred HHHHHHHHhCCCCEEEEE-cCCCCHHHHHHHHHHHHHHHh---hcCceEEEcC---------cHHHHHhCCCCe--EEeC
Q 010240 321 TDAVKAALEGGATIIQLR-EKDADTRGFLEAAKACLQICC---VHGVPLLIND---------RIDIALACDADG--VHLG 385 (514)
Q Consensus 321 ~~~~~~~~~~Gv~~v~lr-~~~~~~~~~~~~~~~~~~~~~---~~~~~l~v~~---------~~~~a~~~ga~g--vhl~ 385 (514)
.+.+.+..++| -+-.|. ....+++.+.+.+++++++.. .+|+.++..+ .++.+.+.|... |-++
T Consensus 604 ~~lvaAvsnAG-glg~l~~~~~~~~e~l~~~I~~~~~~t~~~~~~gvN~~~~~~~~~~~~~~~~~~~~~~gv~i~~v~~~ 682 (2051)
T 2uv8_G 604 PDFVAATTNAG-YTIELAGGGYFSAAGMTAAIDSVVSQIEKGSTFGINLIYVNPFMLQWGIPLIKELRSKGYPIQFLTIG 682 (2051)
T ss_dssp HHHHHHHHHTT-CEEEEEGGGCCSHHHHHHHHHHHHHHSCTTCCEEEEEETTCTTHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHHHHHHcCC-cEEEEccCCCCCHHHHHHHHHHHHHhcCCCCceEEEEeecChhhhhhhHHHHHHHHHcCCCcceEEec
Confidence 45566677777 344553 356778888888888888764 4677777643 235667777664 8887
Q ss_pred CCCCCH----HHHHhhcCCCcEEE--EecCCHHHHHHhhhCCCcEE-Eec-cccCCCCCCCCc---cCCHHHHHHHHHcC
Q 010240 386 QSDMPA----RTARALLGPDKIIG--VSCKTPEEAHQAWIDGANYI-GCG-GVYPTNTKANNL---TVGLDGLKTVCLAS 454 (514)
Q Consensus 386 ~~~~~~----~~~~~~~~~~~~ig--~s~~~~~e~~~a~~~g~d~v-~~~-~vf~t~~k~~~~---~~g~~~l~~~~~~~ 454 (514)
...+.. ..+... +...+.- .+++...++..+.+.|+|++ ++. --+....|.+.. ..-+..+.++++..
T Consensus 683 ag~p~~~~~~~~i~~l-G~~vi~~~~~~~~a~~~~~~~~~~g~d~~ii~~~~G~eaGGH~g~~d~~~~~l~l~~~v~~~~ 761 (2051)
T 2uv8_G 683 AGVPSLEVASEYIETL-GLKYLGLKPGSIDAISQVINIAKAHPNFPIALQWTGGRGGGHHSFEDAHTPMLQMYSKIRRHP 761 (2051)
T ss_dssp SSCCCHHHHHHHHHHS-CCSCEEECCCSHHHHHHHHHHHHHSTTSCEEEEECCSSCSEECCSCCSSHHHHHHHHHHTTCT
T ss_pred CCCCchhhHHHHHHHc-CCEEEEecCchHHHHHHHHHHHHhCCCceeEEEEEccCcCCCCCcccccccHHHHHHHHHhcC
Confidence 776653 223332 3332211 12234555677778899994 220 112222222211 12234577888878
Q ss_pred CCCEEEECCCC-cccHHHHH-----------HCCCCCCceEEEeecccCCC
Q 010240 455 KLPVVAIGGIG-ISNASDVM-----------KIGVSNLKGVAVVSALFDRE 493 (514)
Q Consensus 455 ~~pv~a~GGi~-~~~~~~~~-----------~~Ga~~~~gva~~~~i~~~~ 493 (514)
++||+|.|||. .+.+..++ .+||+ ||.+|+.|+.++
T Consensus 762 ~ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lgad---Gv~~GTrf~~t~ 809 (2051)
T 2uv8_G 762 NIMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPFD---GFLFGSRVMIAK 809 (2051)
T ss_dssp TBCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCCS---CEECSGGGTTST
T ss_pred CceEEEeCCCCCHHHHHHHHccccccccCccCCCCc---eeeechHHHhCc
Confidence 99999999996 78888989 89999 999999999654
No 231
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=96.64 E-value=0.0053 Score=61.13 Aligned_cols=79 Identities=16% Similarity=0.126 Sum_probs=58.2
Q ss_pred CCHHHHHHhhhCCCcEEEeccccCCCC------C---------------CCCccCCHHHHHHHHHcC-CCCEEEECCCC-
Q 010240 409 KTPEEAHQAWIDGANYIGCGGVYPTNT------K---------------ANNLTVGLDGLKTVCLAS-KLPVVAIGGIG- 465 (514)
Q Consensus 409 ~~~~e~~~a~~~g~d~v~~~~vf~t~~------k---------------~~~~~~g~~~l~~~~~~~-~~pv~a~GGi~- 465 (514)
.+++.++.+.+.|+|+|.++.-.-|.. + .+........+.++++.. ++||++.|||.
T Consensus 199 ~s~~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~~ipvia~GGI~~ 278 (368)
T 3vkj_A 199 ISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVPDSFLVGSGGIRS 278 (368)
T ss_dssp CCHHHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHSTTCEEEEESSCCS
T ss_pred CCHHHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcCCCcEEEECCCCC
Confidence 478899999999999998854333200 0 000111225566777666 59999999996
Q ss_pred cccHHHHHHCCCCCCceEEEeeccc
Q 010240 466 ISNASDVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 466 ~~~~~~~~~~Ga~~~~gva~~~~i~ 490 (514)
..++.+++.+||+ +|.+++.++
T Consensus 279 ~~d~~kal~lGA~---~v~ig~~~l 300 (368)
T 3vkj_A 279 GLDAAKAIALGAD---IAGMALPVL 300 (368)
T ss_dssp HHHHHHHHHHTCS---EEEECHHHH
T ss_pred HHHHHHHHHcCCC---EEEEcHHHH
Confidence 7999999999999 999999887
No 232
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=96.57 E-value=0.0023 Score=63.57 Aligned_cols=73 Identities=11% Similarity=0.028 Sum_probs=56.7
Q ss_pred HHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCcccHHHHHHCC-CCCCceEEEeecccCC
Q 010240 414 AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGISNASDVMKIG-VSNLKGVAVVSALFDR 492 (514)
Q Consensus 414 ~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~~~~~~~~~~G-a~~~~gva~~~~i~~~ 492 (514)
++...+.|+||+-++.-. + +.+.++++++.+++||++.||++++++.++++.| ++ +|++|+.++..
T Consensus 256 a~~l~~~Gvd~i~v~~~~---~-------~~~~~~~ik~~~~iPvi~~Ggit~e~a~~~l~~G~aD---~V~iGR~~lad 322 (361)
T 3gka_A 256 ARELGRRRIAFLFARESF---G-------GDAIGQQLKAAFGGPFIVNENFTLDSAQAALDAGQAD---AVAWGKLFIAN 322 (361)
T ss_dssp HHHHHHTTCSEEEEECCC---S-------TTCCHHHHHHHHCSCEEEESSCCHHHHHHHHHTTSCS---EEEESHHHHHC
T ss_pred HHHHHHcCCCEEEECCCC---C-------CHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHcCCcc---EEEECHHhHhC
Confidence 555668899999775321 1 1145667777778999999999999999999998 88 99999999987
Q ss_pred CCHHHHH
Q 010240 493 ECILPES 499 (514)
Q Consensus 493 ~~~~~~~ 499 (514)
++....+
T Consensus 323 Pdl~~k~ 329 (361)
T 3gka_A 323 PDLPRRF 329 (361)
T ss_dssp TTHHHHH
T ss_pred cHHHHHH
Confidence 7755443
No 233
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=96.56 E-value=0.005 Score=76.27 Aligned_cols=166 Identities=16% Similarity=0.109 Sum_probs=106.0
Q ss_pred HHHHHHHHhCCCCEEEEEcCC-CCHHHHHHHHHHHHHHHh---hcCceEEEcC------------cHHHHHhCC--CCeE
Q 010240 321 TDAVKAALEGGATIIQLREKD-ADTRGFLEAAKACLQICC---VHGVPLLIND------------RIDIALACD--ADGV 382 (514)
Q Consensus 321 ~~~~~~~~~~Gv~~v~lr~~~-~~~~~~~~~~~~~~~~~~---~~~~~l~v~~------------~~~~a~~~g--a~gv 382 (514)
.+.+.+..++|. +-.|---. .+.+.+.+.++++++.+. .+++.++..+ .++.+.+.| ++||
T Consensus 442 ~~LaaAVs~AGg-lG~l~~~g~~~~~~l~~~i~~~r~~~~~~~p~~vNl~~~~p~~~~~~~g~~~~~~~~~~~g~~vdgv 520 (3089)
T 3zen_D 442 AKIVAAAANAGH-WAELAGGGQVTEQIFNDRIAELETLLEPGRAIQFNTLFLDPYLWKLQVGGKRLVQRARQSGAPIDGL 520 (3089)
T ss_dssp HHHHHHHHHTTC-EEEECSTTCCSHHHHHHHHHHHHHHSCTTCCCEEEEECSCHHHHHHHHHHHHHHHHHHHTTCSCCEE
T ss_pred HHHHHHHHhCCC-ceeecCCCCCCHHHHHHHHHHHHHhcCCCCceeechhhcChhhhhhccCHHHHHHHHHHcCCCceEE
Confidence 356666667763 33332223 377888888888887663 2445555422 345677888 8899
Q ss_pred EeCCCCCCHHH----HHhhcCCCc-EEEEecCCHHHHHHhhhCCCc------EEEeccccCCCCCCCCccCCH-HHH---
Q 010240 383 HLGQSDMPART----ARALLGPDK-IIGVSCKTPEEAHQAWIDGAN------YIGCGGVYPTNTKANNLTVGL-DGL--- 447 (514)
Q Consensus 383 hl~~~~~~~~~----~~~~~~~~~-~ig~s~~~~~e~~~a~~~g~d------~v~~~~vf~t~~k~~~~~~g~-~~l--- 447 (514)
.++...++.++ +......+. .+...+.|.++++++.+.|+| +|.+--+-. ..|.+. .++ +.+
T Consensus 521 ~~~aG~P~~ee~~~~i~~l~~~Gi~~i~~~~~t~~~a~~~~~i~~d~~~~~y~vv~~G~ea-GGH~g~--~~~~~ll~~~ 597 (3089)
T 3zen_D 521 VVSAGIPDLEEAVDIIDELNEVGISHVVFKPGTVEQIRSVIRIAAEVPTKPVIVHIEGGRA-GGHHSW--EDLDDLLLAT 597 (3089)
T ss_dssp EEESSCCCHHHHHHHHTSTTHHHHCSEEECCCSHHHHHHHHHHHTTSTTSCEEEEECCSSS-SEECCS--CCHHHHHHHH
T ss_pred EEeCCCCchhHhHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHhhhhcCCCcEEEEEeCCCc-CCCCCc--ccHHHHHHHH
Confidence 88775554222 222222222 445578899999988888888 444422111 111111 123 344
Q ss_pred -HHHHHcCCCCEEEECCCC-cccHHHHH-----------HCCCCCCceEEEeecccCCC
Q 010240 448 -KTVCLASKLPVVAIGGIG-ISNASDVM-----------KIGVSNLKGVAVVSALFDRE 493 (514)
Q Consensus 448 -~~~~~~~~~pv~a~GGi~-~~~~~~~~-----------~~Ga~~~~gva~~~~i~~~~ 493 (514)
.++++..++||+|.|||. .+.+..++ .+||+ ||.+|+.|+...
T Consensus 598 ~~~ir~~~~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lGAd---GV~vGTrfl~t~ 653 (3089)
T 3zen_D 598 YSELRSRSNITICVGGGIGTPERSAEYLSGRWAEVHGYPLMPID---GILVGTAAMATL 653 (3089)
T ss_dssp HHHHTTCTTEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCCCS---EEECSSTTTTCT
T ss_pred HHHHhhcCCCeEEEEeCCCCHHHHHHHhccccccccCccCCCCC---EEEecHHHHhCc
Confidence 566666789999999995 89999999 99999 999999999654
No 234
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=96.53 E-value=0.01 Score=59.00 Aligned_cols=74 Identities=15% Similarity=0.222 Sum_probs=54.8
Q ss_pred HHHhhhCCCcEEEeccccCCC---CCC-------CC-----ccCCHHHHHHHHHcC--CCCEEEECCCC-cccHHHHHHC
Q 010240 414 AHQAWIDGANYIGCGGVYPTN---TKA-------NN-----LTVGLDGLKTVCLAS--KLPVVAIGGIG-ISNASDVMKI 475 (514)
Q Consensus 414 ~~~a~~~g~d~v~~~~vf~t~---~k~-------~~-----~~~g~~~l~~~~~~~--~~pv~a~GGi~-~~~~~~~~~~ 475 (514)
+..+.+.|+|.|.++.-.... .++ +. .+..++.++++++.+ ++||++.|||. .+++.+++++
T Consensus 240 a~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~ 319 (367)
T 3zwt_A 240 ASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRA 319 (367)
T ss_dssp HHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHc
Confidence 566778999999875332111 011 00 012357888888888 89999999996 8999999999
Q ss_pred CCCCCceEEEeeccc
Q 010240 476 GVSNLKGVAVVSALF 490 (514)
Q Consensus 476 Ga~~~~gva~~~~i~ 490 (514)
||+ +|.++++++
T Consensus 320 GAd---~V~vgra~l 331 (367)
T 3zwt_A 320 GAS---LVQLYTALT 331 (367)
T ss_dssp TCS---EEEESHHHH
T ss_pred CCC---EEEECHHHH
Confidence 999 999999984
No 235
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.52 E-value=0.027 Score=61.67 Aligned_cols=84 Identities=10% Similarity=0.022 Sum_probs=59.1
Q ss_pred HHHHhhhCCCcEEEeccc----cCCC-CCCCCcc--CCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCC-CCCCceE
Q 010240 413 EAHQAWIDGANYIGCGGV----YPTN-TKANNLT--VGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIG-VSNLKGV 483 (514)
Q Consensus 413 e~~~a~~~g~d~v~~~~v----f~t~-~k~~~~~--~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~G-a~~~~gv 483 (514)
++.++.+.++|++-++.. +... .++...+ ..++..+++++.+++||++.|||+ ++.+.++++.| ++ +|
T Consensus 242 ~~~~~l~~~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~aD---~V 318 (729)
T 1o94_A 242 KFVEMADSLVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYAD---II 318 (729)
T ss_dssp HHHHHHGGGCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEECCSCCCCHHHHHHHHHTTSCS---BE
T ss_pred HHHHHHHhhcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHCCCCC---EE
Confidence 444555558999766432 1111 1111111 236788888888899999999995 89999999998 88 99
Q ss_pred EEeecccCCCCHHHHH
Q 010240 484 AVVSALFDRECILPES 499 (514)
Q Consensus 484 a~~~~i~~~~~~~~~~ 499 (514)
+++++++..++....+
T Consensus 319 ~~gR~~l~~P~~~~~~ 334 (729)
T 1o94_A 319 GCARPSIADPFLPQKV 334 (729)
T ss_dssp EESHHHHHCTTHHHHH
T ss_pred EeCchhhcCchHHHHH
Confidence 9999999777654433
No 236
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=96.47 E-value=0.0045 Score=61.99 Aligned_cols=76 Identities=11% Similarity=-0.027 Sum_probs=58.3
Q ss_pred HHHhhhCCCcEEEeccc-cCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCcccHHHHHHCC-CCCCceEEEeecccC
Q 010240 414 AHQAWIDGANYIGCGGV-YPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGISNASDVMKIG-VSNLKGVAVVSALFD 491 (514)
Q Consensus 414 ~~~a~~~g~d~v~~~~v-f~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~~~~~~~~~~G-a~~~~gva~~~~i~~ 491 (514)
++.+.+.|+||+-++.- +.. +.. ..+ ++++++.+++||++.|||+++++.++++.| ++ +|+++++++.
T Consensus 272 a~~l~~~Gvd~i~v~~~~~~~---~~~---~~~-~~~ir~~~~iPvi~~G~it~~~a~~~l~~g~aD---~V~igR~~l~ 341 (379)
T 3aty_A 272 CKKIEPLSLAYLHYLRGDMVN---QQI---GDV-VAWVRGSYSGVKISNLRYDFEEADQQIREGKVD---AVAFGAKFIA 341 (379)
T ss_dssp HHHHGGGCCSEEEEECSCTTS---CCC---CCH-HHHHHTTCCSCEEEESSCCHHHHHHHHHTTSCS---EEEESHHHHH
T ss_pred HHHHHHhCCCEEEEcCCCcCC---CCc---cHH-HHHHHHHCCCcEEEECCCCHHHHHHHHHcCCCe---EEEecHHHHh
Confidence 55666889999977531 111 111 226 888888889999999999999999999998 88 9999999998
Q ss_pred CCCHHHHH
Q 010240 492 RECILPES 499 (514)
Q Consensus 492 ~~~~~~~~ 499 (514)
.++....+
T Consensus 342 ~P~l~~k~ 349 (379)
T 3aty_A 342 NPDLVERA 349 (379)
T ss_dssp CTTHHHHH
T ss_pred CcHHHHHH
Confidence 77654433
No 237
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.45 E-value=0.013 Score=63.70 Aligned_cols=83 Identities=7% Similarity=-0.019 Sum_probs=57.6
Q ss_pred HHHhhhCCCcEEEecccc--CCCCCCC--CccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCC-CCCCceEEEee
Q 010240 414 AHQAWIDGANYIGCGGVY--PTNTKAN--NLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIG-VSNLKGVAVVS 487 (514)
Q Consensus 414 ~~~a~~~g~d~v~~~~vf--~t~~k~~--~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~G-a~~~~gva~~~ 487 (514)
+.+..+.++|++-++... .....+. .+...++..+++++..++||++.|||+ ++.+.++++.| ++ +|++++
T Consensus 249 ~~~~l~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~~d---~v~~gR 325 (690)
T 3k30_A 249 VLRELGELPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVGVGRFTSPDAMVRQIKAGILD---LIGAAR 325 (690)
T ss_dssp HHHHHTTSSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCSSCEEECSCCCCHHHHHHHHHTTSCS---EEEESH
T ss_pred HHHHHHhhcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHCCCcc---eEEEcH
Confidence 444555689998775321 1001111 112235777777887899999999996 89999999988 88 999999
Q ss_pred cccCCCCHHHHH
Q 010240 488 ALFDRECILPES 499 (514)
Q Consensus 488 ~i~~~~~~~~~~ 499 (514)
.++..++....+
T Consensus 326 ~~~~~P~~~~~~ 337 (690)
T 3k30_A 326 PSIADPFLPNKI 337 (690)
T ss_dssp HHHHCTTHHHHH
T ss_pred HhHhCccHHHHH
Confidence 999777654443
No 238
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=96.37 E-value=0.0031 Score=62.69 Aligned_cols=73 Identities=12% Similarity=-0.002 Sum_probs=56.5
Q ss_pred HHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCcccHHHHHHCC-CCCCceEEEeecccCC
Q 010240 414 AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGISNASDVMKIG-VSNLKGVAVVSALFDR 492 (514)
Q Consensus 414 ~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~~~~~~~~~~G-a~~~~gva~~~~i~~~ 492 (514)
++...+.|+||+-++.-. . |.+.++++++.+++||++.||++++.+.++++.| ++ +|++|++++..
T Consensus 248 a~~l~~~Gvd~i~v~~~~---~-------~~~~~~~ik~~~~iPvi~~Ggit~e~a~~~l~~g~aD---~V~iGR~~lan 314 (362)
T 4ab4_A 248 ARELGKRGIAFICSRERE---A-------DDSIGPLIKEAFGGPYIVNERFDKASANAALASGKAD---AVAFGVPFIAN 314 (362)
T ss_dssp HHHHHHTTCSEEEEECCC---C-------TTCCHHHHHHHHCSCEEEESSCCHHHHHHHHHTTSCS---EEEESHHHHHC
T ss_pred HHHHHHhCCCEEEECCCC---C-------CHHHHHHHHHHCCCCEEEeCCCCHHHHHHHHHcCCcc---EEEECHHhHhC
Confidence 556668899999765311 1 1145667777778999999999999999999998 88 99999999987
Q ss_pred CCHHHHH
Q 010240 493 ECILPES 499 (514)
Q Consensus 493 ~~~~~~~ 499 (514)
++....+
T Consensus 315 Pdl~~k~ 321 (362)
T 4ab4_A 315 PDLPARL 321 (362)
T ss_dssp TTHHHHH
T ss_pred cHHHHHH
Confidence 7754433
No 239
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=96.36 E-value=0.026 Score=52.79 Aligned_cols=124 Identities=15% Similarity=0.193 Sum_probs=78.6
Q ss_pred HHHHHHhCCCCEEEEEcC-----CCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHHHHHhh
Q 010240 323 AVKAALEGGATIIQLREK-----DADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPARTARAL 397 (514)
Q Consensus 323 ~~~~~~~~Gv~~v~lr~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~~~~~~ 397 (514)
-++.+++.|++-|-+-.+ +.+.+...+.++.+.+.|...-+++|+... .+...++.
T Consensus 116 Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~-----------------~Lt~eei~-- 176 (260)
T 3r12_A 116 EAIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETC-----------------YLDTEEKI-- 176 (260)
T ss_dssp HHHHHHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGG-----------------GCCHHHHH--
T ss_pred HHHHHHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCC-----------------CCCHHHHH--
Confidence 456688899888876443 456666677777777777532234444221 01111221
Q ss_pred cCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHc--CCCCEEEECCCC-cccHHHHHH
Q 010240 398 LGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLA--SKLPVVAIGGIG-ISNASDVMK 474 (514)
Q Consensus 398 ~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~--~~~pv~a~GGi~-~~~~~~~~~ 474 (514)
.-++.+.+.|+|||=.|.-|.+ .++ .++.++.+++. .+++|-|.|||. .+++.++++
T Consensus 177 --------------~A~~ia~eaGADfVKTSTGf~~---~GA---T~edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi~ 236 (260)
T 3r12_A 177 --------------AACVISKLAGAHFVKTSTGFGT---GGA---TAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMIM 236 (260)
T ss_dssp --------------HHHHHHHHTTCSEEECCCSSSS---CCC---CHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHH
T ss_pred --------------HHHHHHHHhCcCEEEcCCCCCC---CCC---CHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHH
Confidence 1245667899999966654431 223 34444444443 379999999997 688999999
Q ss_pred CCCCCCceEEEeec
Q 010240 475 IGVSNLKGVAVVSA 488 (514)
Q Consensus 475 ~Ga~~~~gva~~~~ 488 (514)
+||+ -++..++
T Consensus 237 aGA~---RiGtS~g 247 (260)
T 3r12_A 237 YGAD---RIGTSSG 247 (260)
T ss_dssp TTCS---EEEESCH
T ss_pred cCCc---eeecchH
Confidence 9999 8887765
No 240
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=96.32 E-value=0.0062 Score=61.99 Aligned_cols=74 Identities=15% Similarity=0.106 Sum_probs=55.2
Q ss_pred HHHhhhCCCcEEEeccccCCCCC-----CC---Cc-----cCCHHHHHHHHHcC--CCCEEEECCCC-cccHHHHHHCCC
Q 010240 414 AHQAWIDGANYIGCGGVYPTNTK-----AN---NL-----TVGLDGLKTVCLAS--KLPVVAIGGIG-ISNASDVMKIGV 477 (514)
Q Consensus 414 ~~~a~~~g~d~v~~~~vf~t~~k-----~~---~~-----~~g~~~l~~~~~~~--~~pv~a~GGi~-~~~~~~~~~~Ga 477 (514)
++.+.+.|+|.|.++.-...... .. .+ +..++.++++++.+ ++||++.|||. ++++.+++.+||
T Consensus 317 A~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~aGA 396 (443)
T 1tv5_A 317 ADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGA 396 (443)
T ss_dssp HHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTTE
T ss_pred HHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHcCC
Confidence 67778999999988653321100 00 00 11246788888887 89999999996 899999999999
Q ss_pred CCCceEEEeeccc
Q 010240 478 SNLKGVAVVSALF 490 (514)
Q Consensus 478 ~~~~gva~~~~i~ 490 (514)
+ +|.++++++
T Consensus 397 d---~Vqigrall 406 (443)
T 1tv5_A 397 S---VCQLYSCLV 406 (443)
T ss_dssp E---EEEESHHHH
T ss_pred C---EEEEcHHHH
Confidence 9 999999976
No 241
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=96.24 E-value=0.13 Score=49.37 Aligned_cols=164 Identities=16% Similarity=0.166 Sum_probs=110.1
Q ss_pred HHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHHHHHhhcCCC
Q 010240 322 DAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPARTARALLGPD 401 (514)
Q Consensus 322 ~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~~~~~~~~~~ 401 (514)
+.+.++++.|.+.+.+--...+.++-++..+++.++|+.+|+.+-.. +| +++.......... .+
T Consensus 88 e~~~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaE--------LG----~igG~Ed~~~~~~----~~ 151 (307)
T 3n9r_A 88 ESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAE--------LG----RLMGIEDNISVDE----KD 151 (307)
T ss_dssp HHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEE--------ES----CCCCC--------------
T ss_pred HHHHHHHHhCCCcEEEECCCCCHHHHHHHHHHHHHHHHHcCCeEEEE--------ee----eeccccCCccccc----cc
Confidence 67788999999999998888899988999999999999998877421 12 1111110000000 00
Q ss_pred cEEEEecCCHHHHHHhh-hCCCcEEEe--ccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEEC----------------
Q 010240 402 KIIGVSCKTPEEAHQAW-IDGANYIGC--GGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIG---------------- 462 (514)
Q Consensus 402 ~~ig~s~~~~~e~~~a~-~~g~d~v~~--~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~G---------------- 462 (514)
.--.+|+|+.+-. +.|+|.+.+ |.+.-.-..++.+.+.++.|+++.+..++|++-=|
T Consensus 152 ----~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~~~~PLVlHGgS~vp~~~~~~~~~~g 227 (307)
T 3n9r_A 152 ----AVLVNPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLTNIPLVLHGASAIPDNVRKSYLDAG 227 (307)
T ss_dssp ----CCSCCHHHHHHHHHHHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHHHCSCEEESSCCCCCHHHHHHHHHTT
T ss_pred ----ccCCCHHHHHHHHHHHCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhcCCCCeEEeCCCCcchHHHHHHHHhc
Confidence 1135799988744 689999866 33332111123456889999999776689999999
Q ss_pred -------CCCcccHHHHHHCCCCCCceEEEeeccc---------------CCCCHHHHHHHHHHHHHH
Q 010240 463 -------GIGISNASDVMKIGVSNLKGVAVVSALF---------------DRECILPESKKLHAVLMD 508 (514)
Q Consensus 463 -------Gi~~~~~~~~~~~Ga~~~~gva~~~~i~---------------~~~~~~~~~~~~~~~~~~ 508 (514)
|+..+++.++.+.|.. -|=+.+.+. ..-||++..+.-++.+.+
T Consensus 228 g~~~~~~G~p~e~i~~ai~~GV~---KiNi~Tdl~~a~~~~vr~~~~~~~~~~dpr~~~~~~~~a~~~ 292 (307)
T 3n9r_A 228 GDLKGSKGVPFEFLQESVKGGIN---KVNTDTDLRIAFIAEVRKVANEDKSQFDLRKFFSPAQLALKN 292 (307)
T ss_dssp CCCTTCBCCCHHHHHHHHHTTEE---EEEECHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHH
T ss_pred CccCCCCCCCHHHHHHHHHcCce---EEEechHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHHH
Confidence 6678899999999988 888877653 112576665555554444
No 242
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=96.16 E-value=0.019 Score=53.01 Aligned_cols=151 Identities=20% Similarity=0.237 Sum_probs=84.8
Q ss_pred HHhCCCCEEEEEcCCCCHHHH-HHHHHHHHHHHhhcCceEE---Ec----CcHHHHHhCCCCeEEeCCCCCC--HHHHHh
Q 010240 327 ALEGGATIIQLREKDADTRGF-LEAAKACLQICCVHGVPLL---IN----DRIDIALACDADGVHLGQSDMP--ARTARA 396 (514)
Q Consensus 327 ~~~~Gv~~v~lr~~~~~~~~~-~~~~~~~~~~~~~~~~~l~---v~----~~~~~a~~~ga~gvhl~~~~~~--~~~~~~ 396 (514)
+++.|++++=+=....+++.. .+.+++|.+ ....++. +. +..+.+.+.+.|.+.|-....+ ...+++
T Consensus 36 a~~~gaD~iGfIf~~~SpR~V~~~~A~~i~~---~~~~~~~~v~v~v~~~ei~~~i~~~~ld~vQLHG~E~~~~~~~l~~ 112 (228)
T 4aaj_A 36 IVEKHADATGVVVNSNSKRRIPLEKAREIIE---NSAIPVFLVSTMVGFSEWAMAIERTGAQYIQVHSNALPQTIDTLKK 112 (228)
T ss_dssp HHHTTCSEEEEECSSSSTTBCCHHHHHHHHH---HCSSCEEEEECCCCHHHHHHHHHHHTCSEEEECSCCCHHHHHHHHH
T ss_pred HHHcCCCEEEEEecCCCCCCCCHHHHHHHHH---hhCCCCEEEeccCchHHHHHHHHhccchheecccccCHHHHHHHhh
Confidence 568899887664433333221 223333432 2222221 21 1223455778999988544322 123333
Q ss_pred hcCCCcEEEEecC----CHHH-----HHHhhhCCCcEEEeccccCCCCCCC-CccCCHHHHHHHHHcCCCCEEEECCCCc
Q 010240 397 LLGPDKIIGVSCK----TPEE-----AHQAWIDGANYIGCGGVYPTNTKAN-NLTVGLDGLKTVCLASKLPVVAIGGIGI 466 (514)
Q Consensus 397 ~~~~~~~ig~s~~----~~~e-----~~~a~~~g~d~v~~~~vf~t~~k~~-~~~~g~~~l~~~~~~~~~pv~a~GGi~~ 466 (514)
.++...+=...+. .+++ ...+....+||+++-. . .+ .....|+.++.+.. +.|++..||+++
T Consensus 113 ~~~~~viKa~~v~~~~~~~~~~~~~~~~~~~~~~~d~~LlDs----~--GGtG~~fDW~~~~~~~~--~~p~iLAGGL~p 184 (228)
T 4aaj_A 113 EFGVFVMKAFRVPTISKNPEEDANRLLSEISRYNADMVLLDT----G--AGSGKLHDLRVSSLVAR--KIPVIVAGGLNA 184 (228)
T ss_dssp HHCCEEEEEEECCSSCSCHHHHHHHHHHHHHHSCCSEEEEEC-------------CCCHHHHHHHH--HSCEEEESSCCT
T ss_pred ccCceEEEEEEecccccchhhhHHHHHHHHhccCCCEEccCC----C--CCCcCcCChHHHHHhhh--cCCeEEECCCCH
Confidence 3332222223332 2222 3344566799997743 1 11 23457888777654 579999999999
Q ss_pred ccHHHHHH-CCCCCCceEEEeecccC
Q 010240 467 SNASDVMK-IGVSNLKGVAVVSALFD 491 (514)
Q Consensus 467 ~~~~~~~~-~Ga~~~~gva~~~~i~~ 491 (514)
+|+.++++ .+.. ||=+.|.+=.
T Consensus 185 eNV~~Ai~~~~P~---gVDVsSGVEs 207 (228)
T 4aaj_A 185 ENVEEVIKVVKPY---GVDVSSGVEK 207 (228)
T ss_dssp TTHHHHHHHHCCS---EEEESGGGEE
T ss_pred HHHHHHHHHhCCC---EEEeCCCCCC
Confidence 99998776 7999 9999999974
No 243
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=96.11 E-value=0.03 Score=55.23 Aligned_cols=48 Identities=21% Similarity=0.158 Sum_probs=42.1
Q ss_pred CCHHHHHHHHHcC-CCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccCC
Q 010240 442 VGLDGLKTVCLAS-KLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFDR 492 (514)
Q Consensus 442 ~g~~~l~~~~~~~-~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~ 492 (514)
..++.+.++++.. ++||++.|||. .+++.+++.+||+ +|.++++++..
T Consensus 263 ~a~~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aGAd---~V~vgra~l~~ 312 (354)
T 4ef8_A 263 TALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGAS---MVQVGTALQEE 312 (354)
T ss_dssp HHHHHHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHTEE---EEEECHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcCCC---EEEEhHHHHHh
Confidence 3477888888876 79999999996 8999999999999 99999999854
No 244
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=96.07 E-value=0.0097 Score=55.04 Aligned_cols=66 Identities=18% Similarity=0.318 Sum_probs=50.8
Q ss_pred HHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC--CCCEEEECCCC-cccHHHHHHCCCCCCceEEEeec
Q 010240 414 AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS--KLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSA 488 (514)
Q Consensus 414 ~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~--~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~ 488 (514)
++.+.+.|+|+|-.+.-|. .....++.++.+++.. ++||++.|||. ++++.+++++||+ .|++.+.
T Consensus 138 a~~a~eaGad~I~tstg~~------~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~---~iG~s~~ 206 (225)
T 1mzh_A 138 VEICIEAGADFIKTSTGFA------PRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGAD---RIGTSSG 206 (225)
T ss_dssp HHHHHHHTCSEEECCCSCS------SSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCS---EEEESCH
T ss_pred HHHHHHhCCCEEEECCCCC------CCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCch---HHHHccH
Confidence 5667788999995444221 1224678888888765 79999999996 7899999999999 8877754
No 245
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=96.06 E-value=0.034 Score=49.52 Aligned_cols=64 Identities=17% Similarity=0.233 Sum_probs=49.3
Q ss_pred HHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEee-cccC
Q 010240 414 AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVS-ALFD 491 (514)
Q Consensus 414 ~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~-~i~~ 491 (514)
++...+..+|++ -+.|. .-++.++++++..++|++|-|+|. .+++.+++++||+ +|..+. .+|.
T Consensus 120 ~~~i~~~~PD~i---EiLPG--------i~p~iI~~i~~~~~~PiIaGGlI~~~edv~~al~aGA~---aVsTs~~~LW~ 185 (192)
T 3kts_A 120 VALIQKVQPDCI---ELLPG--------IIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAI---AVTTSNKHLWE 185 (192)
T ss_dssp HHHHHHHCCSEE---EEECT--------TCHHHHHHHHHHHCCCEEEESSCCSHHHHHHHHTTTEE---EEEECCGGGGT
T ss_pred HHHHhhcCCCEE---EECCc--------hhHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCe---EEEeCCHHHhC
Confidence 334445578988 44431 235789999998999999999996 7899999999999 998876 4563
No 246
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=96.04 E-value=0.32 Score=45.81 Aligned_cols=179 Identities=12% Similarity=0.082 Sum_probs=112.0
Q ss_pred EEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCC--CHH----HHHHHHHHHHHHHhhcCceEEE----cCcHHH
Q 010240 304 LYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDA--DTR----GFLEAAKACLQICCVHGVPLLI----NDRIDI 373 (514)
Q Consensus 304 ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~--~~~----~~~~~~~~~~~~~~~~~~~l~v----~~~~~~ 373 (514)
+++|..+.... ..+...+.++++.+.|+++|..-...+ ++. -..+..+.++++|++.|++++. ..+++.
T Consensus 24 ~~vIAgpc~~~-~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~Gl~~~te~~d~~~~~~ 102 (262)
T 1zco_A 24 FTIIAGPCSIE-SREQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYGLVTVTEVMDTRHVEL 102 (262)
T ss_dssp CEEEEECSBCC-CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECCCGGGHHH
T ss_pred cEEEEeCCCCC-CHHHHHHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcCCcEEEeeCCHHhHHH
Confidence 56676553322 135677888888999998876532211 110 0034456677888999998875 235777
Q ss_pred HHhCCCCeEEeCCCCCCHH-HHHhhcCCCcEEEEec--C-CHHHHHHhh----hCCCcEEEecc----ccCCCCCCCCcc
Q 010240 374 ALACDADGVHLGQSDMPAR-TARALLGPDKIIGVSC--K-TPEEAHQAW----IDGANYIGCGG----VYPTNTKANNLT 441 (514)
Q Consensus 374 a~~~ga~gvhl~~~~~~~~-~~~~~~~~~~~ig~s~--~-~~~e~~~a~----~~g~d~v~~~~----vf~t~~k~~~~~ 441 (514)
+.++ ++.+-++..+.... .++..-..++.++.+. . |++|+..|. ..|.+.+.+-. -|++. ....
T Consensus 103 l~~~-vd~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y---~~~~ 178 (262)
T 1zco_A 103 VAKY-SDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETA---TRFT 178 (262)
T ss_dssp HHHH-CSEEEECGGGTTCHHHHHHHTTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCS---SSSB
T ss_pred HHhh-CCEEEECcccccCHHHHHHHHhcCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCc---Chhh
Confidence 7777 89999998776543 3555444555666555 3 799987766 45654444422 23211 2334
Q ss_pred CCHHHHHHHHHcCCCCEEEE----CCCCc---ccHHHHHHCCCCCCceEEEeeccc
Q 010240 442 VGLDGLKTVCLASKLPVVAI----GGIGI---SNASDVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 442 ~g~~~l~~~~~~~~~pv~a~----GGi~~---~~~~~~~~~Ga~~~~gva~~~~i~ 490 (514)
+.+..+..+++.+++||+.. +|... .-.......|++ |+.+-+-+.
T Consensus 179 v~L~ai~~lk~~~~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~---Gl~iE~H~~ 231 (262)
T 1zco_A 179 LDISAVPVVKELSHLPIIVDPSHPAGRRSLVIPLAKAAYAIGAD---GIMVEVHPE 231 (262)
T ss_dssp CCTTHHHHHHHHBSSCEEECSSTTTCSGGGHHHHHHHHHHTTCS---EEEEEBCSS
T ss_pred cCHHHHHHHHhhhCCCEEEEcCCCCCccchHHHHHHHHHHcCCC---EEEEEecCC
Confidence 57778888888788997554 23211 224557788999 999998864
No 247
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=96.04 E-value=0.0057 Score=62.04 Aligned_cols=82 Identities=15% Similarity=0.159 Sum_probs=57.6
Q ss_pred HHHhhh-CCCcEEEeccccC----CCCCCCCccCCHHHHHHHHHcC--CCCEEEECCC-CcccHHHHHHCCCCCCceEEE
Q 010240 414 AHQAWI-DGANYIGCGGVYP----TNTKANNLTVGLDGLKTVCLAS--KLPVVAIGGI-GISNASDVMKIGVSNLKGVAV 485 (514)
Q Consensus 414 ~~~a~~-~g~d~v~~~~vf~----t~~k~~~~~~g~~~l~~~~~~~--~~pv~a~GGi-~~~~~~~~~~~Ga~~~~gva~ 485 (514)
+....+ .|+|||-++.--. ....+..+...++.++.+++.+ ++||++.||| +++.+.++++. ++ +|++
T Consensus 270 a~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~-aD---lVai 345 (419)
T 3l5a_A 270 IDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQH-AD---MVGM 345 (419)
T ss_dssp HHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECSSCCSHHHHHHHGGG-CS---EEEE
T ss_pred HHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEECCCCCHHHHHHHHHh-CC---cHHH
Confidence 445556 8999998864211 0011111223456777887776 6999999999 58999999999 99 9999
Q ss_pred eecccCCCCHHHHH
Q 010240 486 VSALFDRECILPES 499 (514)
Q Consensus 486 ~~~i~~~~~~~~~~ 499 (514)
|+++...++....+
T Consensus 346 GR~~IanPdlv~ki 359 (419)
T 3l5a_A 346 SSPFVTEPDFVHKL 359 (419)
T ss_dssp STHHHHCTTHHHHH
T ss_pred HHHHHHCcHHHHHH
Confidence 99999777654433
No 248
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=96.03 E-value=0.0044 Score=58.35 Aligned_cols=78 Identities=23% Similarity=0.244 Sum_probs=56.6
Q ss_pred CHHH-HHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEee
Q 010240 410 TPEE-AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVS 487 (514)
Q Consensus 410 ~~~e-~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~ 487 (514)
++.+ ++.+.+.|+|++.+. ............++.++++++..++|+++.|||+ ++++.+++++||+ +|.+++
T Consensus 32 d~~~~a~~~~~~Gad~i~v~---d~~~~~~~~~~~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~Gad---~V~lg~ 105 (252)
T 1ka9_F 32 DPVEAARAYDEAGADELVFL---DISATHEERAILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSGAD---KVSVNS 105 (252)
T ss_dssp CHHHHHHHHHHHTCSCEEEE---ECCSSTTCHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCS---EEEECH
T ss_pred CHHHHHHHHHHcCCCEEEEE---cCCccccCccccHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCC---EEEECh
Confidence 4444 556678899998554 2111000112235678888888899999999998 7889999999999 999999
Q ss_pred cccCCC
Q 010240 488 ALFDRE 493 (514)
Q Consensus 488 ~i~~~~ 493 (514)
.++...
T Consensus 106 ~~l~~p 111 (252)
T 1ka9_F 106 AAVRRP 111 (252)
T ss_dssp HHHHCT
T ss_pred HHHhCc
Confidence 988544
No 249
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=96.03 E-value=0.18 Score=47.91 Aligned_cols=144 Identities=15% Similarity=0.227 Sum_probs=102.2
Q ss_pred HHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCC-CCCCHHHHHhhcC
Q 010240 321 TDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQ-SDMPARTARALLG 399 (514)
Q Consensus 321 ~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~-~~~~~~~~~~~~~ 399 (514)
.+.+.++++.|.+.+.+--...+.++-++..+++.+.|+.+|+.+-.. +| |++. .+. .....
T Consensus 87 ~e~i~~ai~~GFtSVMiDgS~lp~eeNi~~Tk~vv~~ah~~gvsVEaE--------lG----~vgg~ed~-~~~~~---- 149 (286)
T 1gvf_A 87 LDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAE--------LG----RLGGVEDD-MSVDA---- 149 (286)
T ss_dssp HHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEE--------ES----CCC---------------
T ss_pred HHHHHHHHHcCCCeEEECCCCCCHHHHHHHHHHHHHHHHHcCCEEEEE--------Ee----eccCcccC-ccccc----
Confidence 467889999999999998889999998999999999999998876431 11 1111 110 00000
Q ss_pred CCcEEEEecCCHHHHHHhh-hCCCcEEEe--ccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCC--CcccHHHHHH
Q 010240 400 PDKIIGVSCKTPEEAHQAW-IDGANYIGC--GGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGI--GISNASDVMK 474 (514)
Q Consensus 400 ~~~~ig~s~~~~~e~~~a~-~~g~d~v~~--~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi--~~~~~~~~~~ 474 (514)
.+.. -.+|+|+.+-. +.|+|.+.+ |.+.-. .| +.+.+.++.|+++.+..++|++-=||- ..+++.++.+
T Consensus 150 ~~~~----~T~Peea~~Fv~~TgvD~LAvaiGt~HG~-Y~-~~p~Ld~~~L~~I~~~~~vpLVlHGgSG~~~e~i~~ai~ 223 (286)
T 1gvf_A 150 ESAF----LTDPQEAKRFVELTGVDSLAVAIGTAHGL-YS-KTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIE 223 (286)
T ss_dssp -CCS----SCCHHHHHHHHHHHCCSEEEECSSCCSSC-CS-SCCCCCHHHHHHHHHHCCSCEEECCCTTCCHHHHHHHHH
T ss_pred cccc----CCCHHHHHHHHHHHCCCEEEeecCccccC-cC-CCCccCHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHH
Confidence 0000 25799988766 689999866 332211 11 235588999999999999999999954 5788999999
Q ss_pred CCCCCCceEEEeeccc
Q 010240 475 IGVSNLKGVAVVSALF 490 (514)
Q Consensus 475 ~Ga~~~~gva~~~~i~ 490 (514)
.|.. -|=+.+.+.
T Consensus 224 ~Gv~---KiNi~Tdl~ 236 (286)
T 1gvf_A 224 LGVT---KVNVATELK 236 (286)
T ss_dssp TTEE---EEEECHHHH
T ss_pred CCCe---EEEEChHHH
Confidence 9999 888887763
No 250
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=96.00 E-value=0.023 Score=52.35 Aligned_cols=148 Identities=16% Similarity=0.200 Sum_probs=89.4
Q ss_pred CCceEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcC-----CCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHH
Q 010240 300 SDLFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREK-----DADTRGFLEAAKACLQICCVHGVPLLINDRIDIA 374 (514)
Q Consensus 300 ~~~~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a 374 (514)
.+..+-.+..-++-....+.-..-++.+++.|++-|-+-.+ +.+.+...+.++.+.+.|...-+++|+.. -.+
T Consensus 62 ~~v~v~tVigFP~G~~~~~~K~~E~~~Ai~~GAdEIDmVinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt-~~L- 139 (231)
T 3ndo_A 62 SGLAIAAVAGFPSGKHVPGIKATEAELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRAATLKVIVES-AAL- 139 (231)
T ss_dssp TTCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCH-HHH-
T ss_pred CCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehHhhhcccHHHHHHHHHHHHHHccCCceEEEEEC-ccc-
Confidence 44566565543332100111223456688999988877444 46677777788888888853333445533 111
Q ss_pred HhCCCCeEEeCCCCCCHHHHHhhcCCCcEEEEecCCHHH----HHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHH
Q 010240 375 LACDADGVHLGQSDMPARTARALLGPDKIIGVSCKTPEE----AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTV 450 (514)
Q Consensus 375 ~~~ga~gvhl~~~~~~~~~~~~~~~~~~~ig~s~~~~~e----~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~ 450 (514)
.. -+|.+| ++.+.+.|+|||=.|.-|.. ..++. ++.++.+
T Consensus 140 ~~-------------------------------~~t~eei~~a~~ia~~aGADfVKTSTGf~~--~~gAt---~edv~lm 183 (231)
T 3ndo_A 140 LE-------------------------------FSGEPLLADVCRVARDAGADFVKTSTGFHP--SGGAS---VQAVEIM 183 (231)
T ss_dssp HH-------------------------------HTCHHHHHHHHHHHHHTTCSEEECCCSCCT--TCSCC---HHHHHHH
T ss_pred CC-------------------------------CCCHHHHHHHHHHHHHHCcCEEEcCCCCCC--CCCCC---HHHHHHH
Confidence 10 113333 45566899999966554420 12233 4444444
Q ss_pred HHc--CCCCEEEECCCC-cccHHHHHHCCCCCCceEEEeec
Q 010240 451 CLA--SKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSA 488 (514)
Q Consensus 451 ~~~--~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~ 488 (514)
++. .+++|-|.|||. .+++.+++++||+ -++..++
T Consensus 184 ~~~v~~~v~VKaaGGIrt~~~a~~~i~aGa~---RiGtS~g 221 (231)
T 3ndo_A 184 ARTVGERLGVKASGGIRTAEQAAAMLDAGAT---RLGLSGS 221 (231)
T ss_dssp HHHHTTTSEEEEESSCCSHHHHHHHHHTTCS---EEEESSH
T ss_pred HHHhCCCceEEEeCCCCCHHHHHHHHHhcch---hcccchH
Confidence 443 379999999997 6889999999999 8887654
No 251
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=95.95 E-value=0.11 Score=50.02 Aligned_cols=141 Identities=17% Similarity=0.248 Sum_probs=100.4
Q ss_pred HHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCC-CCCCHHHHHhhcCC
Q 010240 322 DAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQ-SDMPARTARALLGP 400 (514)
Q Consensus 322 ~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~-~~~~~~~~~~~~~~ 400 (514)
+.+.++++.|.+.+.+--...+.++-.+..+++.+.|+.+|+.+-.. +| +++. .+. . . .
T Consensus 89 e~i~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaE--------LG----~vgg~Ed~-v---~----~ 148 (323)
T 2isw_A 89 ESVKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHARSVSVEAE--------LG----TLGGIEED-V---Q----N 148 (323)
T ss_dssp HHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEE--------ES----CC-----------------
T ss_pred HHHHHHHHcCCCeEEecCCCCCHHHHHHHHHHHHHHHHHcCCeEEEE--------eC----CccCCccC-c---c----c
Confidence 56889999999999998888999998999999999999998876431 11 1111 110 0 0 0
Q ss_pred CcEEEEecCCHHHHHHhh-hCCCcEEEe--ccccCCCCCCCCcc--CCHHHHHHHHHcCCCCEEEEC-------------
Q 010240 401 DKIIGVSCKTPEEAHQAW-IDGANYIGC--GGVYPTNTKANNLT--VGLDGLKTVCLASKLPVVAIG------------- 462 (514)
Q Consensus 401 ~~~ig~s~~~~~e~~~a~-~~g~d~v~~--~~vf~t~~k~~~~~--~g~~~l~~~~~~~~~pv~a~G------------- 462 (514)
... -.+|+|+.+-. +.|+|.+.+ |.+.-.-..++.+. +.++.|+++.+.+++|++-=|
T Consensus 149 ~~~----yTdPeea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~~vpLVlHGgSsvp~~~~~~~~ 224 (323)
T 2isw_A 149 TVQ----LTEPQDAKKFVELTGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLTGIPLVMHGSSSVPKDVKDMIN 224 (323)
T ss_dssp -CC----CCCHHHHHHHHHHHCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHHCSCEEECSCCCCCHHHHHHHH
T ss_pred ccc----cCCHHHHHHHHHHHCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHhCCCeEEECCCCCCHHHHHHHH
Confidence 101 25799988765 689999876 33322111123344 788999999998899999999
Q ss_pred ----------CCCcccHHHHHHCCCCCCceEEEeecc
Q 010240 463 ----------GIGISNASDVMKIGVSNLKGVAVVSAL 489 (514)
Q Consensus 463 ----------Gi~~~~~~~~~~~Ga~~~~gva~~~~i 489 (514)
|+..+++.++.+.|.. -|=+.+.+
T Consensus 225 ~~gg~~~~~~Gvp~e~i~~ai~~GV~---KiNi~Tdl 258 (323)
T 2isw_A 225 KYGGKMPDAVGVPIESIVHAIGEGVC---KINVDSDS 258 (323)
T ss_dssp HTTCCCTTCBCCCHHHHHHHHHTTEE---EEEECHHH
T ss_pred HhccccccCCCCCHHHHHHHHHCCCe---EEEEChHH
Confidence 8888999999999998 88887776
No 252
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=95.91 E-value=0.0038 Score=62.76 Aligned_cols=75 Identities=16% Similarity=0.098 Sum_probs=55.4
Q ss_pred HHHhhhCCCcEEEeccccCCCC--------CCCC-----ccCCHHHHHHHHHcC--CCCEEEECCCC-cccHHHHHHCCC
Q 010240 414 AHQAWIDGANYIGCGGVYPTNT--------KANN-----LTVGLDGLKTVCLAS--KLPVVAIGGIG-ISNASDVMKIGV 477 (514)
Q Consensus 414 ~~~a~~~g~d~v~~~~vf~t~~--------k~~~-----~~~g~~~l~~~~~~~--~~pv~a~GGi~-~~~~~~~~~~Ga 477 (514)
++.+.+.|+|.|.++.-+.... ..+. .+..++.++++++.+ ++||++.|||. .+++.+++.+||
T Consensus 289 A~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aGA 368 (415)
T 3i65_A 289 ADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGA 368 (415)
T ss_dssp HHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHTE
T ss_pred HHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcCC
Confidence 5667789999998764332110 0011 112346788888877 79999999996 899999999999
Q ss_pred CCCceEEEeecccC
Q 010240 478 SNLKGVAVVSALFD 491 (514)
Q Consensus 478 ~~~~gva~~~~i~~ 491 (514)
+ +|.++++++.
T Consensus 369 d---~VqIgra~l~ 379 (415)
T 3i65_A 369 S---VCQLYSCLVF 379 (415)
T ss_dssp E---EEEESHHHHH
T ss_pred C---EEEEcHHHHh
Confidence 9 9999999873
No 253
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=95.87 E-value=0.0075 Score=56.80 Aligned_cols=78 Identities=18% Similarity=0.193 Sum_probs=57.0
Q ss_pred CHHH-HHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEee
Q 010240 410 TPEE-AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVS 487 (514)
Q Consensus 410 ~~~e-~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~ 487 (514)
++.+ ++.+.+.|+|++-+.- -..........++.++++++..++|+++-|||+ ++++..++++||+ +|.+++
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d---~~~~~~~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~Gad---~V~lg~ 104 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLD---ITASVEKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGAD---KVSINT 104 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEE---SSCSSSHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTTCS---EEEESH
T ss_pred CHHHHHHHHHHcCCCEEEEEC---CchhhcCCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCC---EEEECh
Confidence 4544 5566789999995542 111101122346778888888899999999997 6889999999999 999999
Q ss_pred cccCCC
Q 010240 488 ALFDRE 493 (514)
Q Consensus 488 ~i~~~~ 493 (514)
..+...
T Consensus 105 ~~l~~p 110 (253)
T 1thf_D 105 AAVENP 110 (253)
T ss_dssp HHHHCT
T ss_pred HHHhCh
Confidence 888543
No 254
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=95.83 E-value=0.28 Score=46.97 Aligned_cols=145 Identities=17% Similarity=0.248 Sum_probs=102.2
Q ss_pred HHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHHHHHhhcCC
Q 010240 321 TDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPARTARALLGP 400 (514)
Q Consensus 321 ~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~~~~~~~~~ 400 (514)
.+.+.++++.|.+.+.+--...+.++-++..+++.+.|+.+|+.+-.. +| +++.......... .
T Consensus 85 ~e~~~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaE--------LG----~vgg~Ed~~~~~~----~ 148 (305)
T 1rvg_A 85 YESVLRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAE--------LG----RLAGIEEHVAVDE----K 148 (305)
T ss_dssp HHHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEE--------ES----CCCCSCC----------C
T ss_pred HHHHHHHHHcCCCeeeeCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEE--------Ee----eccCccCCccccc----c
Confidence 367888999999999998889999998999999999999998876431 11 1111110000000 0
Q ss_pred CcEEEEecCCHHHHHHhh-hCCCcEEEe--ccccCCCCCC-CCccCCHHHHHHHHHcCCCCEEEECCC------------
Q 010240 401 DKIIGVSCKTPEEAHQAW-IDGANYIGC--GGVYPTNTKA-NNLTVGLDGLKTVCLASKLPVVAIGGI------------ 464 (514)
Q Consensus 401 ~~~ig~s~~~~~e~~~a~-~~g~d~v~~--~~vf~t~~k~-~~~~~g~~~l~~~~~~~~~pv~a~GGi------------ 464 (514)
... -.+|+|+.+-. +.|+|.+.+ |.+.-. .|+ +.+.+.++.|+++.+.+++|++-=||-
T Consensus 149 ~~~----yT~Peea~~Fv~~TgvD~LAvaiGt~HG~-Yk~~g~p~L~~~~L~~I~~~~~vpLVlHGgSsv~~~~~~~~~~ 223 (305)
T 1rvg_A 149 DAL----LTNPEEARIFMERTGADYLAVAIGTSHGA-YKGKGRPFIDHARLERIARLVPAPLVLHGASAVPPELVERFRA 223 (305)
T ss_dssp CTT----CCCHHHHHHHHHHHCCSEEEECSSCCSSS-BCSSSSCCCCHHHHHHHHHHCCSCEEECSCCCCCHHHHHHHHH
T ss_pred ccc----cCCHHHHHHHHHHHCCCEEEEecCccccc-cCCCCCCccCHHHHHHHHHhcCCCEEEeCCCCCcHHHHHHHHh
Confidence 101 25799988766 589999876 333211 122 345688999999999999999999955
Q ss_pred -----------CcccHHHHHHCCCCCCceEEEeecc
Q 010240 465 -----------GISNASDVMKIGVSNLKGVAVVSAL 489 (514)
Q Consensus 465 -----------~~~~~~~~~~~Ga~~~~gva~~~~i 489 (514)
..+++.++.+.|.. -|=+.+.+
T Consensus 224 ~gg~~~~~~G~p~e~i~~ai~~GV~---KiNi~Tdl 256 (305)
T 1rvg_A 224 SGGEIGEAAGIHPEDIKKAISLGIA---KINTDTDL 256 (305)
T ss_dssp TTCCCCSCBCCCHHHHHHHHHTTEE---EEEECHHH
T ss_pred hccccccCCCCCHHHHHHHHHCCCe---EEEEChHH
Confidence 57889999999988 88887766
No 255
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=95.76 E-value=0.092 Score=54.39 Aligned_cols=45 Identities=20% Similarity=0.186 Sum_probs=37.0
Q ss_pred HHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccCC
Q 010240 445 DGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFDR 492 (514)
Q Consensus 445 ~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~ 492 (514)
..+.+++...++||+|.|||. ..++..++.+||+ +|.+|+.|...
T Consensus 318 ~~~~~~~~~~~vpVia~GGi~~~~di~kalalGA~---~v~~g~~~~~~ 363 (486)
T 2cu0_A 318 AMVADRAQEYGLYVIADGGIRYSGDIVKAIAAGAD---AVMLGNLLAGT 363 (486)
T ss_dssp HHHHHHHHHHTCEEEEESCCCSHHHHHHHHHTTCS---EEEESTTTTTB
T ss_pred HHHHHHHHHcCCcEEecCCCCCHHHHHHHHHcCCC---ceeeChhhhcC
Confidence 344445544589999999996 7899999999999 99999999854
No 256
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=95.76 E-value=0.051 Score=50.17 Aligned_cols=128 Identities=15% Similarity=0.134 Sum_probs=79.5
Q ss_pred HHHHHHHHHhCCCCEEEEEcCCCC-HHHHHHHHHHHHHHHhhcCceE--EEcCcHHHHHhCCCCeEEeCCCCCCHHHHHh
Q 010240 320 ITDAVKAALEGGATIIQLREKDAD-TRGFLEAAKACLQICCVHGVPL--LINDRIDIALACDADGVHLGQSDMPARTARA 396 (514)
Q Consensus 320 ~~~~~~~~~~~Gv~~v~lr~~~~~-~~~~~~~~~~~~~~~~~~~~~l--~v~~~~~~a~~~ga~gvhl~~~~~~~~~~~~ 396 (514)
-..-++.+++.|++-|-+-.+-.. .++..+.+.++.+.|.+++.++ ++.... + ...++.
T Consensus 90 k~~e~~~Av~~GAdEID~vinig~~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~------------L-----~~e~i~- 151 (234)
T 1n7k_A 90 KLVEAQTVLEAGATELDVVPHLSLGPEAVYREVSGIVKLAKSYGAVVKVILEAPL------------W-----DDKTLS- 151 (234)
T ss_dssp HHHHHHHHHHHTCCEEEECCCGGGCHHHHHHHHHHHHHHHHHTTCEEEEECCGGG------------S-----CHHHHH-
T ss_pred HHHHHHHHHHcCCCEEEEeccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEeccC------------C-----CHHHHH-
Confidence 344567789999988877544222 1255666777888888877655 443210 0 111221
Q ss_pred hcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHH--HHHcCCCCEEEECCCC-cccHHHHH
Q 010240 397 LLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKT--VCLASKLPVVAIGGIG-ISNASDVM 473 (514)
Q Consensus 397 ~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~--~~~~~~~pv~a~GGi~-~~~~~~~~ 473 (514)
.-++.+.++|+|||=.+.-|.+. .++ .++.++. +++...+||-+.|||. .+++.+++
T Consensus 152 ---------------~a~ria~eaGADfVKTsTG~~~~--~gA---t~~dv~l~~m~~~v~v~VKaaGGirt~~~al~~i 211 (234)
T 1n7k_A 152 ---------------LLVDSSRRAGADIVKTSTGVYTK--GGD---PVTVFRLASLAKPLGMGVKASGGIRSGIDAVLAV 211 (234)
T ss_dssp ---------------HHHHHHHHTTCSEEESCCSSSCC--CCS---HHHHHHHHHHHGGGTCEEEEESSCCSHHHHHHHH
T ss_pred ---------------HHHHHHHHhCCCEEEeCCCCCCC--CCC---CHHHHHHHHHHHHHCCCEEEecCCCCHHHHHHHH
Confidence 12566779999999544433210 112 2344444 5554459999999997 67888899
Q ss_pred HCCCCCCceEEEeec
Q 010240 474 KIGVSNLKGVAVVSA 488 (514)
Q Consensus 474 ~~Ga~~~~gva~~~~ 488 (514)
++|+. -++..+.
T Consensus 212 ~aGa~---RiG~S~g 223 (234)
T 1n7k_A 212 GAGAD---IIGTSSA 223 (234)
T ss_dssp HTTCS---EEEETTH
T ss_pred HcCcc---ccchHHH
Confidence 99999 8877543
No 257
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=95.75 E-value=0.01 Score=59.90 Aligned_cols=83 Identities=8% Similarity=-0.030 Sum_probs=58.8
Q ss_pred HHHhhhCC------CcEEEeccccCCC--CCCC-C--cc-CCHHHHHHHHHcCCCCEEEECCCCcccHHHHHHCC-CCCC
Q 010240 414 AHQAWIDG------ANYIGCGGVYPTN--TKAN-N--LT-VGLDGLKTVCLASKLPVVAIGGIGISNASDVMKIG-VSNL 480 (514)
Q Consensus 414 ~~~a~~~g------~d~v~~~~vf~t~--~k~~-~--~~-~g~~~l~~~~~~~~~pv~a~GGi~~~~~~~~~~~G-a~~~ 480 (514)
++.+.+.| +||+-++.-.... ..+. . .+ ..++.++++++.+++||++.|||+++.+.++++.| ++
T Consensus 266 a~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~~G~i~~~~a~~~l~~g~aD-- 343 (402)
T 2hsa_B 266 VERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFICSGGYTRELGIEAVAQGDAD-- 343 (402)
T ss_dssp HHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEEESSCCHHHHHHHHHTTSCS--
T ss_pred HHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCCCEEEeCCCCHHHHHHHHHCCCCc--
Confidence 45556778 9999775311111 0110 0 01 12567788888889999999999999999999998 88
Q ss_pred ceEEEeecccCCCCHHHHH
Q 010240 481 KGVAVVSALFDRECILPES 499 (514)
Q Consensus 481 ~gva~~~~i~~~~~~~~~~ 499 (514)
+|+++++++..++....+
T Consensus 344 -~V~igR~~l~dP~l~~k~ 361 (402)
T 2hsa_B 344 -LVSYGRLFISNPDLVMRI 361 (402)
T ss_dssp -EEEESHHHHHCTTHHHHH
T ss_pred -eeeecHHHHhCchHHHHH
Confidence 999999999877655443
No 258
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=95.56 E-value=0.14 Score=50.73 Aligned_cols=112 Identities=16% Similarity=0.254 Sum_probs=72.9
Q ss_pred CHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhc-CceEEE---c--CcHHHHHhCCCCeEEeCC---CC-
Q 010240 319 SITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVH-GVPLLI---N--DRIDIALACDADGVHLGQ---SD- 388 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~-~~~l~v---~--~~~~~a~~~ga~gvhl~~---~~- 388 (514)
+..+.++.++++|++.|++...........+.+++++ +.+ +++++. . +..+.+.++|+|+|.++. ..
T Consensus 108 ~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik---~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG~gpGs~~ 184 (366)
T 4fo4_A 108 GNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETR---AAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSIC 184 (366)
T ss_dssp TCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHH---HHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTB
T ss_pred hHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHH---HhcCCCceEeeeeCCHHHHHHHHHcCCCEEEEecCCCCCC
Confidence 3467889999999999999655545555555555444 344 666654 2 234556788999999831 11
Q ss_pred ---------CC-HH---HHH---hhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCC
Q 010240 389 ---------MP-AR---TAR---ALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPT 433 (514)
Q Consensus 389 ---------~~-~~---~~~---~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t 433 (514)
.+ .. .++ +..+...+..-.+.+..++.++..+|||.|.+|..|-.
T Consensus 185 ~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~f~~ 245 (366)
T 4fo4_A 185 TTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAG 245 (366)
T ss_dssp CHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred CcccccCcccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhc
Confidence 11 11 111 12233444434678999999999999999999987753
No 259
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=95.50 E-value=0.025 Score=53.56 Aligned_cols=74 Identities=18% Similarity=0.191 Sum_probs=56.2
Q ss_pred HHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEeecc
Q 010240 411 PEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSAL 489 (514)
Q Consensus 411 ~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i 489 (514)
.+-++.+.+.|+|.+.+.-.-.... .....++.++++++..++|+++-|||+ .+++..+++.|++ +|.+++.+
T Consensus 33 ~~~a~~~~~~Ga~~i~v~d~~~~~~---~~g~~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~~~Gad---~v~lg~~~ 106 (266)
T 2w6r_A 33 RDWVVEVEKRGAGEILLTSIDRDGT---KSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGAD---KALAASVF 106 (266)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTSSC---SSCCCHHHHHHHGGGCCSCEEEESCCCSTHHHHHHHHHTCS---EEECCCCC
T ss_pred HHHHHHHHHCCCCEEEEEecCcccC---CCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCc---HhhhhHHH
Confidence 3446667789999997742211111 122357899999988899999999997 6889999999999 99999998
Q ss_pred c
Q 010240 490 F 490 (514)
Q Consensus 490 ~ 490 (514)
+
T Consensus 107 ~ 107 (266)
T 2w6r_A 107 H 107 (266)
T ss_dssp -
T ss_pred H
Confidence 8
No 260
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=95.47 E-value=0.3 Score=48.59 Aligned_cols=175 Identities=19% Similarity=0.209 Sum_probs=112.1
Q ss_pred eEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCC----------CCHHHHHHHHHHHHHHHhhcCceEEEc----
Q 010240 303 FLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKD----------ADTRGFLEAAKACLQICCVHGVPLLIN---- 368 (514)
Q Consensus 303 ~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~----------~~~~~~~~~~~~~~~~~~~~~~~l~v~---- 368 (514)
.+|++.+....+ .+...+.++++.+.|+++|..+... +.. +..+.+.+.|+++|++++..
T Consensus 143 ~~~Iigpcsves--~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~----egl~~L~~~~~~~Gl~~~te~~d~ 216 (385)
T 3nvt_A 143 PVFVFGPCSVES--YEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGL----EGLKILKRVSDEYGLGVISEIVTP 216 (385)
T ss_dssp CEEEEECSBCCC--HHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTH----HHHHHHHHHHHHHTCEEEEECCSG
T ss_pred eEEEEEeCCcCC--HHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCH----HHHHHHHHHHHHcCCEEEEecCCH
Confidence 466777765543 3567888888999999999776432 222 34467778899999988752
Q ss_pred CcHHHHHhCCCCeEEeCCCCCC-HHHHHhhcCCCcEEEEec---CCHHHHHHhh----hCCCc-EEEe--c-cccCCCCC
Q 010240 369 DRIDIALACDADGVHLGQSDMP-ARTARALLGPDKIIGVSC---KTPEEAHQAW----IDGAN-YIGC--G-GVYPTNTK 436 (514)
Q Consensus 369 ~~~~~a~~~ga~gvhl~~~~~~-~~~~~~~~~~~~~ig~s~---~~~~e~~~a~----~~g~d-~v~~--~-~vf~t~~k 436 (514)
.+++.+.++ ++.+-++..+.. ...++..-+.++.+..+. .|++|+..|. +.|.+ ++++ | .-||+.+
T Consensus 217 ~~~~~l~~~-vd~lkIgs~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~- 294 (385)
T 3nvt_A 217 ADIEVALDY-VDVIQIGARNMQNFELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKAT- 294 (385)
T ss_dssp GGHHHHTTT-CSEEEECGGGTTCHHHHHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSS-
T ss_pred HHHHHHHhh-CCEEEECcccccCHHHHHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCC-
Confidence 356777777 999999987653 233333333455555554 5889877664 45664 4444 1 1233211
Q ss_pred CCCccCCHHHHHHHHHcCCCCEEEE----CCCC---cccHHHHHHCCCCCCceEEEeeccc
Q 010240 437 ANNLTVGLDGLKTVCLASKLPVVAI----GGIG---ISNASDVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 437 ~~~~~~g~~~l~~~~~~~~~pv~a~----GGi~---~~~~~~~~~~Ga~~~~gva~~~~i~ 490 (514)
...+.+..+..+++.+++||+.- +|-. +.-......+||+ |+.+=.-+.
T Consensus 295 --~~~ldl~~i~~lk~~~~lpV~~D~th~~G~r~~v~~~a~AAvA~GA~---gl~iE~H~~ 350 (385)
T 3nvt_A 295 --RNTLDISAVPILKKETHLPVMVDVTHSTGRKDLLLPCAKAALAIEAD---GVMAEVHPD 350 (385)
T ss_dssp --SSBCCTTHHHHHHHHBSSCEEEEHHHHHCCGGGHHHHHHHHHHTTCS---EEEEEBCSC
T ss_pred --ccccCHHHHHHHHHhcCCCEEEcCCCCCCccchHHHHHHHHHHhCCC---EEEEEecCC
Confidence 23467788888888789999654 2211 1123457889999 999877554
No 261
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=95.40 E-value=1.2 Score=42.64 Aligned_cols=145 Identities=14% Similarity=0.167 Sum_probs=91.6
Q ss_pred HhCCCCEEEEEc---------CC---CCHHHHHHHHHHHHHHHhhcCceEEEcC------------cHHHHHhCCCCeEE
Q 010240 328 LEGGATIIQLRE---------KD---ADTRGFLEAAKACLQICCVHGVPLLIND------------RIDIALACDADGVH 383 (514)
Q Consensus 328 ~~~Gv~~v~lr~---------~~---~~~~~~~~~~~~~~~~~~~~~~~l~v~~------------~~~~a~~~ga~gvh 383 (514)
-+.|++.+.+-. ++ .+.++....++ .+++..+.++++.- .+....+.|+.|||
T Consensus 46 e~aG~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~---~I~r~~~~pviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~ 122 (305)
T 3ih1_A 46 RNTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERAR---DLVRATDLPVLVDIDTGFGGVLNVARTAVEMVEAKVAAVQ 122 (305)
T ss_dssp HHTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHH---HHHHHHCCCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEE
T ss_pred HHcCCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHH---HHHHhcCCCEEEECCCCCCCHHHHHHHHHHHHHhCCcEEE
Confidence 356888888765 22 23444444444 44445567777621 13445678999999
Q ss_pred eCCCCC-------------C----HHHH---HhhcCCCcEEEEecCC-----HHH----HHHhhhCCCcEEEeccccCCC
Q 010240 384 LGQSDM-------------P----ARTA---RALLGPDKIIGVSCKT-----PEE----AHQAWIDGANYIGCGGVYPTN 434 (514)
Q Consensus 384 l~~~~~-------------~----~~~~---~~~~~~~~~ig~s~~~-----~~e----~~~a~~~g~d~v~~~~vf~t~ 434 (514)
+..... + ...+ +.. +.+..|-.-+.. .+| ++...++|||.|++=.+
T Consensus 123 iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A-~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e~~---- 197 (305)
T 3ih1_A 123 IEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV-APSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPEAL---- 197 (305)
T ss_dssp EECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH-CTTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEETTC----
T ss_pred ECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc-CCCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEcCC----
Confidence 976531 1 1112 112 345555544443 333 44566889999976321
Q ss_pred CCCCCccCCHHHHHHHHHcCCCCEEE---ECCCCc-ccHHHHHHCCCCCCceEEEeeccc
Q 010240 435 TKANNLTVGLDGLKTVCLASKLPVVA---IGGIGI-SNASDVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 435 ~k~~~~~~g~~~l~~~~~~~~~pv~a---~GGi~~-~~~~~~~~~Ga~~~~gva~~~~i~ 490 (514)
...+.++++++.+++|+++ .||-++ -+..++.++|+. -|..+...+
T Consensus 198 -------~~~~~~~~i~~~~~~P~~~n~~~~g~tp~~~~~eL~~lGv~---~v~~~~~~~ 247 (305)
T 3ih1_A 198 -------QSEEEFRLFNSKVNAPLLANMTEFGKTPYYSAEEFANMGFQ---MVIYPVTSL 247 (305)
T ss_dssp -------CSHHHHHHHHHHSCSCBEEECCTTSSSCCCCHHHHHHTTCS---EEEECSHHH
T ss_pred -------CCHHHHHHHHHHcCCCEEEeecCCCCCCCCCHHHHHHcCCC---EEEEchHHH
Confidence 1468889999989999875 256554 478999999999 999988777
No 262
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=95.38 E-value=0.45 Score=45.20 Aligned_cols=142 Identities=18% Similarity=0.262 Sum_probs=103.0
Q ss_pred HHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeC-CCCCCHHHHHhhcC
Q 010240 321 TDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLG-QSDMPARTARALLG 399 (514)
Q Consensus 321 ~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~-~~~~~~~~~~~~~~ 399 (514)
.+.+.++++.|.+.+.+--...+.++-++..+++.++|+.+|+.+-.. +| |++ ..+... . .
T Consensus 93 ~e~i~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaE--------lG----~vgG~Ed~~~-~-~---- 154 (288)
T 3q94_A 93 FEKCKEAIDAGFTSVMIDASHHPFEENVETTKKVVEYAHARNVSVEAE--------LG----TVGGQEDDVI-A-E---- 154 (288)
T ss_dssp HHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEE--------ES----BCBCSCSSCG-G-G----
T ss_pred HHHHHHHHHcCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEE--------ee----eeccccCCcC-C-c----
Confidence 457888999999999998888899998999999999999998876431 11 111 122111 0 0
Q ss_pred CCcEEEEecCCHHHHHHhh-hCCCcEEEe--ccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC--cccHHHHHH
Q 010240 400 PDKIIGVSCKTPEEAHQAW-IDGANYIGC--GGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG--ISNASDVMK 474 (514)
Q Consensus 400 ~~~~ig~s~~~~~e~~~a~-~~g~d~v~~--~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~--~~~~~~~~~ 474 (514)
+. --.+|+|+.+-. +.|+|.+.+ |.+.-.. ++.+.+.++.|+++.+.+++|++-=||-. .+++.++.+
T Consensus 155 -~~----~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Y--~~~p~Ld~~~L~~I~~~v~vpLVlHGgSG~~~e~i~~ai~ 227 (288)
T 3q94_A 155 -GV----IYADPAECKHLVEATGIDCLAPALGSVHGPY--KGEPNLGFAEMEQVRDFTGVPLVLHGGTGIPTADIEKAIS 227 (288)
T ss_dssp -GC----BCCCHHHHHHHHHHHCCSEEEECSSCBSSCC--SSSCCCCHHHHHHHHHHHCSCEEECCCTTCCHHHHHHHHH
T ss_pred -cc----cCCCHHHHHHHHHHHCCCEEEEEcCcccCCc--CCCCccCHHHHHHHHHhcCCCEEEeCCCCCCHHHHHHHHH
Confidence 10 135799987765 699999876 3332111 12356889999999998899999998764 688999999
Q ss_pred CCCCCCceEEEeeccc
Q 010240 475 IGVSNLKGVAVVSALF 490 (514)
Q Consensus 475 ~Ga~~~~gva~~~~i~ 490 (514)
.|.. -|=+.+.+.
T Consensus 228 ~Gv~---KiNi~Tdl~ 240 (288)
T 3q94_A 228 LGTS---KINVNTENQ 240 (288)
T ss_dssp TTEE---EEEECHHHH
T ss_pred cCCe---EEEEChHHH
Confidence 9998 888877663
No 263
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=95.22 E-value=0.13 Score=50.70 Aligned_cols=111 Identities=18% Similarity=0.256 Sum_probs=70.9
Q ss_pred HHHHHHHHHhC--CCCEEEEEcCCCCHHHHHHHHHHHHHHHhhc-CceEEEc-----CcHHHHHhCCCCeEEeCCCC---
Q 010240 320 ITDAVKAALEG--GATIIQLREKDADTRGFLEAAKACLQICCVH-GVPLLIN-----DRIDIALACDADGVHLGQSD--- 388 (514)
Q Consensus 320 ~~~~~~~~~~~--Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~-~~~l~v~-----~~~~~a~~~ga~gvhl~~~~--- 388 (514)
..+.++.+++. |++.+++.....+...+.+.+++++ +.+ ++++++. ++...+.++|+|+|.++...
T Consensus 119 ~~~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr---~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~~g~G~~ 195 (351)
T 2c6q_A 119 DFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVR---KRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSV 195 (351)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHH---HHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTT
T ss_pred HHHHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHH---HhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEECCCCCcC
Confidence 34667788886 9999988655444444455544444 455 6777642 24556789999999775421
Q ss_pred ----------CCH----HHHHh---hcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCC
Q 010240 389 ----------MPA----RTARA---LLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPT 433 (514)
Q Consensus 389 ----------~~~----~~~~~---~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t 433 (514)
.+. .++.+ ..+...+..-.+.|..++.+|..+|||.|.+|..|-.
T Consensus 196 ~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlalGA~~V~vG~~fl~ 257 (351)
T 2c6q_A 196 CTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAG 257 (351)
T ss_dssp BCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred cCccccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHcCCCceeccHHHhc
Confidence 111 11111 1122333322678999999999999999999988853
No 264
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=95.18 E-value=0.48 Score=46.35 Aligned_cols=180 Identities=14% Similarity=0.121 Sum_probs=112.2
Q ss_pred eEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEE--EcCCCCHHH----HHHHHHHHHHHHhhcCceEEE----cCcHH
Q 010240 303 FLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQL--REKDADTRG----FLEAAKACLQICCVHGVPLLI----NDRID 372 (514)
Q Consensus 303 ~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~l--r~~~~~~~~----~~~~~~~~~~~~~~~~~~l~v----~~~~~ 372 (514)
++|+|..+.... ..+...+.++++.+.|++++.. ..+..++.. -.+..+.+++.|+++|++++. ..+++
T Consensus 106 ~~~vIAgpcs~e-s~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~Gl~~~te~~d~~~~~ 184 (350)
T 1vr6_A 106 YFTIIAGPCSVE-GREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKYGMYVVTEALGEDDLP 184 (350)
T ss_dssp EEEEEEECSBCC-CHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECSSGGGHH
T ss_pred CeEEEEeCCCcC-CHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHH
Confidence 578887554322 1355778888888999998744 222112100 024455677789999998875 23577
Q ss_pred HHHhCCCCeEEeCCCCCCHH-HHHhhcCCCcEEEEec--C-CHHHHHHhh----hCCC-cEEEe---ccccCCCCCCCCc
Q 010240 373 IALACDADGVHLGQSDMPAR-TARALLGPDKIIGVSC--K-TPEEAHQAW----IDGA-NYIGC---GGVYPTNTKANNL 440 (514)
Q Consensus 373 ~a~~~ga~gvhl~~~~~~~~-~~~~~~~~~~~ig~s~--~-~~~e~~~a~----~~g~-d~v~~---~~vf~t~~k~~~~ 440 (514)
.+.++ ++.+-++..+.... .++..-+.++.++.+. . |++|+..|. ..|- +.+++ ..-||+.+ ..
T Consensus 185 ~l~~~-vd~lkIgAr~~~n~~LL~~va~~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~---~~ 260 (350)
T 1vr6_A 185 KVAEY-ADIIQIGARNAQNFRLLSKAGSYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKAT---RN 260 (350)
T ss_dssp HHHHH-CSEEEECGGGTTCHHHHHHHHTTCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSS---SS
T ss_pred HHHHh-CCEEEECcccccCHHHHHHHHccCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcC---hh
Confidence 77777 89999998775533 3444434455555554 3 788877665 3565 66655 33455432 33
Q ss_pred cCCHHHHHHHHHcCCCCEEEE----CCCC---cccHHHHHHCCCCCCceEEEeeccc
Q 010240 441 TVGLDGLKTVCLASKLPVVAI----GGIG---ISNASDVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 441 ~~g~~~l~~~~~~~~~pv~a~----GGi~---~~~~~~~~~~Ga~~~~gva~~~~i~ 490 (514)
.+.+..+..+++.+++||+.. +|-. ..-......+||+ |+.+=+-+.
T Consensus 261 ~vdl~ai~~lk~~~~lpVi~dssHs~G~~~~v~~~a~AAvA~GA~---Gl~IE~H~~ 314 (350)
T 1vr6_A 261 TLDISAVPIIRKESHLPILVDPSHSGGRRDLVIPLSRAAIAVGAH---GIIVEVHPE 314 (350)
T ss_dssp BCCTTHHHHHHHHBSSCEEECHHHHHCSGGGHHHHHHHHHHHTCS---EEEEEBCSC
T ss_pred hhhHHHHHHHHHhhCCCEEEeCCCCCcccchHHHHHHHHHHhCCC---EEEEEecCC
Confidence 466777788888778997552 2321 1223345678999 999988775
No 265
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=95.16 E-value=0.018 Score=53.82 Aligned_cols=78 Identities=23% Similarity=0.298 Sum_probs=58.3
Q ss_pred CCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEee
Q 010240 409 KTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVS 487 (514)
Q Consensus 409 ~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~ 487 (514)
...+.++.+.+.|+|++.+.-.... .+ .....++.++++++..++|+++-||++ ++++.+++++||+ +|.+++
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~~~~~~--~~-~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~Gad---~V~i~~ 107 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAILDITAA--PE-GRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGAD---KVSVNT 107 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEEECCCC--TT-THHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCS---EEEESH
T ss_pred cHHHHHHHHHHcCCCEEEEEeCCcc--cc-CCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCC---EEEECh
Confidence 3456677788999998866532111 01 122346788888888899999999997 7889999999999 999999
Q ss_pred cccCC
Q 010240 488 ALFDR 492 (514)
Q Consensus 488 ~i~~~ 492 (514)
.++..
T Consensus 108 ~~~~~ 112 (253)
T 1h5y_A 108 AAVRN 112 (253)
T ss_dssp HHHHC
T ss_pred HHhhC
Confidence 87743
No 266
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=95.06 E-value=0.13 Score=50.91 Aligned_cols=109 Identities=17% Similarity=0.274 Sum_probs=72.5
Q ss_pred HHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEE-c----CcHHHHHhCCCCeEEeCCCC-------
Q 010240 321 TDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLI-N----DRIDIALACDADGVHLGQSD------- 388 (514)
Q Consensus 321 ~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v-~----~~~~~a~~~ga~gvhl~~~~------- 388 (514)
.+.++.+++.|++.|++.....+...+.+.++++ ++.+++++++ + +..+.+.++|+|+|.++...
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i---~~~~~~~Vivg~v~t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr 183 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEI---KSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPGSICTTR 183 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHH---HHHCCCEEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTCCHH
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHH---HHhcCCcEEEccCCCHHHHHHHHHcCcCEEEEecCCCcCCCcc
Confidence 5678899999999999866655555555554444 4455788876 2 23456678999999884210
Q ss_pred ------CC-HH---HH---HhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccC
Q 010240 389 ------MP-AR---TA---RALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYP 432 (514)
Q Consensus 389 ------~~-~~---~~---~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~ 432 (514)
.+ .. .+ .+..+...+..-.+.+.+++.++..+|||.|.+|..|-
T Consensus 184 ~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~~~ 240 (361)
T 3khj_A 184 IVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILA 240 (361)
T ss_dssp HHTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHTCSEEEESTTTT
T ss_pred cccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcCCCEEEEChhhh
Confidence 11 11 11 11123344544467899999999999999999987765
No 267
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=95.01 E-value=0.052 Score=50.44 Aligned_cols=74 Identities=9% Similarity=0.085 Sum_probs=53.3
Q ss_pred hhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCC-CCEEEECCCCcc-----------cHHHHHHCCCCCCceEE
Q 010240 417 AWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASK-LPVVAIGGIGIS-----------NASDVMKIGVSNLKGVA 484 (514)
Q Consensus 417 a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~-~pv~a~GGi~~~-----------~~~~~~~~Ga~~~~gva 484 (514)
+.+.|.|-++.|+ .....+++.++ -.++...||.+. +..+++++|++ .+.
T Consensus 153 a~~~g~~GvV~s~---------------~e~~~ir~~~~~~fl~vtPGIr~~g~~~~dQ~rv~t~~~~~~aGad---~lV 214 (239)
T 3tr2_A 153 AKSAGLDGVVCSA---------------QEAALLRKQFDRNFLLVTPGIRLETDEKGDQKRVMTPRAAIQAGSD---YLV 214 (239)
T ss_dssp HHHHTCCEEECCH---------------HHHHHHHTTCCTTSEEEECCBC----------CCBCHHHHHHHTCS---EEE
T ss_pred HHHcCCCEEEECc---------------hhHHHHHHhcCCCcEEECCCcCCCCCCcCcccccCCHHHHHHcCCC---EEE
Confidence 4455777665553 22345555553 346778999764 47789999999 999
Q ss_pred EeecccCCCCHHHHHHHHHHHHHH
Q 010240 485 VVSALFDRECILPESKKLHAVLMD 508 (514)
Q Consensus 485 ~~~~i~~~~~~~~~~~~~~~~~~~ 508 (514)
+||.|++++||.++++++++.+.+
T Consensus 215 vGr~I~~a~dp~~a~~~i~~~i~~ 238 (239)
T 3tr2_A 215 IGRPITQSTDPLKALEAIDKDIKT 238 (239)
T ss_dssp ECHHHHTSSSHHHHHHHHHHHC--
T ss_pred EChHHhCCCCHHHHHHHHHHHHhh
Confidence 999999999999999999987754
No 268
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=94.74 E-value=1.6 Score=41.75 Aligned_cols=146 Identities=18% Similarity=0.162 Sum_probs=90.8
Q ss_pred hCCCCEEEEEc----------CC---CCHHHHHHHHHHHHHHHhhcCceEEEcC------------cHHHHHhCCCCeEE
Q 010240 329 EGGATIIQLRE----------KD---ADTRGFLEAAKACLQICCVHGVPLLIND------------RIDIALACDADGVH 383 (514)
Q Consensus 329 ~~Gv~~v~lr~----------~~---~~~~~~~~~~~~~~~~~~~~~~~l~v~~------------~~~~a~~~ga~gvh 383 (514)
+.|++.+.+-. ++ .+.++... .++.+++..+.++++.- .+....+.|+.|||
T Consensus 40 ~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~---~~~~I~r~~~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~ 116 (298)
T 3eoo_A 40 AVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLV---DANRITNATNLPLLVDIDTGWGGAFNIARTIRSFIKAGVGAVH 116 (298)
T ss_dssp HHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHH---HHHHHHHHCCSCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEE
T ss_pred HcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHH---HHHHHHhhcCCeEEEECCCCCCCHHHHHHHHHHHHHhCCeEEE
Confidence 45777777754 11 23344444 44445555677877621 23445678999999
Q ss_pred eCCCCC-------------CHH----HHH---hh-cCCCcEEEEecCCH-----HH----HHHhhhCCCcEEEeccccCC
Q 010240 384 LGQSDM-------------PAR----TAR---AL-LGPDKIIGVSCKTP-----EE----AHQAWIDGANYIGCGGVYPT 433 (514)
Q Consensus 384 l~~~~~-------------~~~----~~~---~~-~~~~~~ig~s~~~~-----~e----~~~a~~~g~d~v~~~~vf~t 433 (514)
+..... +.. .++ .. .+.+..|-+-+... +| ++...+.|||.|++-.+
T Consensus 117 iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~Ra~ay~~AGAD~if~~~~--- 193 (298)
T 3eoo_A 117 LEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAM--- 193 (298)
T ss_dssp EECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEECCC---
T ss_pred ECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHHHHHHhhHhcCCCEEEeCCC---
Confidence 965432 111 111 11 23566666656532 22 44556899999965221
Q ss_pred CCCCCCccCCHHHHHHHHHcCCCCEEEE---CCCCc-ccHHHHHHCCCCCCceEEEeecccC
Q 010240 434 NTKANNLTVGLDGLKTVCLASKLPVVAI---GGIGI-SNASDVMKIGVSNLKGVAVVSALFD 491 (514)
Q Consensus 434 ~~k~~~~~~g~~~l~~~~~~~~~pv~a~---GGi~~-~~~~~~~~~Ga~~~~gva~~~~i~~ 491 (514)
...+.++++++.+++|+++- +|-++ -+..++.++|+. -|..+...+.
T Consensus 194 --------~~~ee~~~~~~~~~~Pl~~n~~~~g~tp~~~~~eL~~lGv~---~v~~~~~~~r 244 (298)
T 3eoo_A 194 --------KTLDDYRRFKEAVKVPILANLTEFGSTPLFTLDELKGANVD---IALYCCGAYR 244 (298)
T ss_dssp --------CSHHHHHHHHHHHCSCBEEECCTTSSSCCCCHHHHHHTTCC---EEEECSHHHH
T ss_pred --------CCHHHHHHHHHHcCCCeEEEeccCCCCCCCCHHHHHHcCCe---EEEEchHHHH
Confidence 25788899998888998663 55554 578999999999 9999887773
No 269
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=94.72 E-value=0.011 Score=55.25 Aligned_cols=78 Identities=18% Similarity=0.166 Sum_probs=57.9
Q ss_pred CHH-HHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEee
Q 010240 410 TPE-EAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVS 487 (514)
Q Consensus 410 ~~~-e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~ 487 (514)
++. -++.+.+.|+|++.+.-.-.. .+ .....++.+++++ ..++|+++-|||+ .+++..++++|++ +|.+++
T Consensus 31 ~~~~~a~~~~~~Gad~i~v~d~~~~--~~-~~~~~~~~i~~i~-~~~ipvi~~Ggi~~~~~~~~~~~~Gad---~V~lg~ 103 (241)
T 1qo2_A 31 DPVELVEKLIEEGFTLIHVVDLSNA--IE-NSGENLPVLEKLS-EFAEHIQIGGGIRSLDYAEKLRKLGYR---RQIVSS 103 (241)
T ss_dssp CHHHHHHHHHHTTCCCEEEEEHHHH--HH-CCCTTHHHHHHGG-GGGGGEEEESSCCSHHHHHHHHHTTCC---EEEECH
T ss_pred CHHHHHHHHHHcCCCEEEEeccccc--cc-CCchhHHHHHHHH-hcCCcEEEECCCCCHHHHHHHHHCCCC---EEEECc
Confidence 444 466777899999976421110 00 1224578888888 6799999999997 6889999999999 999999
Q ss_pred cccCCCC
Q 010240 488 ALFDREC 494 (514)
Q Consensus 488 ~i~~~~~ 494 (514)
.++..++
T Consensus 104 ~~l~~p~ 110 (241)
T 1qo2_A 104 KVLEDPS 110 (241)
T ss_dssp HHHHCTT
T ss_pred hHhhChH
Confidence 9886554
No 270
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=94.71 E-value=0.51 Score=47.92 Aligned_cols=145 Identities=15% Similarity=0.104 Sum_probs=97.5
Q ss_pred HHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEE--cC--cHHHHHhCCCCeEEeCCCCCC--------H
Q 010240 324 VKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLI--ND--RIDIALACDADGVHLGQSDMP--------A 391 (514)
Q Consensus 324 ~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v--~~--~~~~a~~~ga~gvhl~~~~~~--------~ 391 (514)
+.++...|++.|.|-...++..++.+ +...++..|..+++ ++ ..+.|.++|++-+=+...++. .
T Consensus 123 i~ea~~~GAD~ILLi~a~l~~~~l~~----l~~~a~~lgm~~LvEvh~~eE~~~A~~lga~iIGinnr~L~t~~~dl~~~ 198 (452)
T 1pii_A 123 IYLARYYQADACLLMLSVLDDDQYRQ----LAAVAHSLEMGVLTEVSNEEEQERAIALGAKVVGINNRDLRDLSIDLNRT 198 (452)
T ss_dssp HHHHHHTTCSEEEEETTTCCHHHHHH----HHHHHHHTTCEEEEEECSHHHHHHHHHTTCSEEEEESEETTTTEECTHHH
T ss_pred HHHHHHcCCCEEEEEcccCCHHHHHH----HHHHHHHcCCeEEEEeCCHHHHHHHHHCCCCEEEEeCCCCCCCCCCHHHH
Confidence 44588999999999888888655544 44455667887765 44 345678899997765554431 1
Q ss_pred HHHHhhcCCCcEE--EEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC-ccc
Q 010240 392 RTARALLGPDKII--GVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISN 468 (514)
Q Consensus 392 ~~~~~~~~~~~~i--g~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~ 468 (514)
..+....+.+..+ ....+|++++.++.+. +|-+++|.-+-.. .. -...++++... . +=+-|++ +++
T Consensus 199 ~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVGealmr~---~d---~~~~~~~l~~~-~---~KICGit~~ed 267 (452)
T 1pii_A 199 RELAPKLGHNVTVISESGINTYAQVRELSHF-ANGFLIGSALMAH---DD---LHAAVRRVLLG-E---NKVCGLTRGQD 267 (452)
T ss_dssp HHHHHHHCTTSEEEEESCCCCHHHHHHHTTT-CSEEEECHHHHTC---SC---HHHHHHHHHHC-S---CEECCCCSHHH
T ss_pred HHHHHhCCCCCeEEEECCCCCHHHHHHHHHh-CCEEEEcHHHcCC---cC---HHHHHHHHHHH-h---ccccCCCcHHH
Confidence 2333334434333 2345799999999999 9999999766421 11 13455666532 2 3566887 899
Q ss_pred HHHHHHCCCCCCceEEEe
Q 010240 469 ASDVMKIGVSNLKGVAVV 486 (514)
Q Consensus 469 ~~~~~~~Ga~~~~gva~~ 486 (514)
+..+.++|++ .++++
T Consensus 268 a~~a~~~Gad---~iGfI 282 (452)
T 1pii_A 268 AKAAYDAGAI---YGGLI 282 (452)
T ss_dssp HHHHHHHTCS---EEEEE
T ss_pred HHHHHhcCCC---EEEee
Confidence 9999999999 88777
No 271
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=94.63 E-value=0.091 Score=49.21 Aligned_cols=73 Identities=8% Similarity=0.024 Sum_probs=54.0
Q ss_pred HhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCC-CCEEEECCCCcc-----------cHHHHHHCCCCCCceE
Q 010240 416 QAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASK-LPVVAIGGIGIS-----------NASDVMKIGVSNLKGV 483 (514)
Q Consensus 416 ~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~-~pv~a~GGi~~~-----------~~~~~~~~Ga~~~~gv 483 (514)
.+.+.|.|=+++|+ ..++.+++.++ -.++...||.+. +..+++++|++ .+
T Consensus 170 ~a~~aG~~GvV~sa---------------~e~~~iR~~~g~~fl~VtPGIr~qg~~~~dQ~Rv~t~~~a~~aGad---~i 231 (255)
T 3ldv_A 170 LTKNAGLDGVVCSA---------------QEASLLKQHLGREFKLVTPGIRPAGSEQGDQRRIMTPAQAIASGSD---YL 231 (255)
T ss_dssp HHHHTTCSEEECCH---------------HHHHHHHHHHCTTSEEEEECCCCTTSTTSSCSSSCCHHHHHHTTCS---EE
T ss_pred HHHHcCCCEEEECH---------------HHHHHHHHhcCCCcEEEeCCcccCcCCccceeccCCHHHHHHcCCC---EE
Confidence 34466777776553 23455555543 346677888754 36789999999 99
Q ss_pred EEeecccCCCCHHHHHHHHHHHH
Q 010240 484 AVVSALFDRECILPESKKLHAVL 506 (514)
Q Consensus 484 a~~~~i~~~~~~~~~~~~~~~~~ 506 (514)
.+||+|++++||.++++++++.+
T Consensus 232 VvGr~I~~a~dp~~a~~~i~~ei 254 (255)
T 3ldv_A 232 VIGRPITQAAHPEVVLEEINSSL 254 (255)
T ss_dssp EECHHHHTCSCHHHHHHHHHHHC
T ss_pred EECHHHhCCCCHHHHHHHHHHhh
Confidence 99999999999999999988754
No 272
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=94.56 E-value=0.31 Score=50.66 Aligned_cols=112 Identities=14% Similarity=0.217 Sum_probs=75.9
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcC-ceEEEc-----CcHHHHHhCCCCeEEeCCCC---
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHG-VPLLIN-----DRIDIALACDADGVHLGQSD--- 388 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~-~~l~v~-----~~~~~a~~~ga~gvhl~~~~--- 388 (514)
.+..+.+++++++|++.+.+-..+.......+.++++++ .+. .+++.. +..+.+.++|+|++.++...
T Consensus 255 ~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~---~~~~~~vi~g~v~t~e~a~~~~~aGad~i~vg~g~gsi 331 (511)
T 3usb_A 255 ADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRA---KYPSLNIIAGNVATAEATKALIEAGANVVKVGIGPGSI 331 (511)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH---HCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTT
T ss_pred cchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHH---hCCCceEEeeeeccHHHHHHHHHhCCCEEEECCCCccc
Confidence 346778999999999999998777666666665555544 443 566542 23556778899999763211
Q ss_pred ----------CC-HH---HH---HhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccC
Q 010240 389 ----------MP-AR---TA---RALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYP 432 (514)
Q Consensus 389 ----------~~-~~---~~---~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~ 432 (514)
.+ .. .+ .+..+...+..-.+.+..++.+|..+|||.|.+|..|-
T Consensus 332 ~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GA~~V~vGs~~~ 392 (511)
T 3usb_A 332 CTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAAGAHVVMLGSMFA 392 (511)
T ss_dssp CCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTT
T ss_pred cccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHhCchhheecHHHh
Confidence 11 11 11 12223455554567899999999999999999998874
No 273
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=94.36 E-value=1.2 Score=42.41 Aligned_cols=163 Identities=17% Similarity=0.180 Sum_probs=110.2
Q ss_pred HHHHHHHhC--------CCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeC-CCCCCHH
Q 010240 322 DAVKAALEG--------GATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLG-QSDMPAR 392 (514)
Q Consensus 322 ~~~~~~~~~--------Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~-~~~~~~~ 392 (514)
+.+.++++. |.+.+.+--...+.++-++..+++.+.|+.+|+.+-.. +| +++ ..+...
T Consensus 96 e~i~~ai~~~~~~~~~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaE--------lG----~igG~Edgv~- 162 (306)
T 3pm6_A 96 EIIKRAADLSRSETHEPGFDSIMVDMSHFSKEENLRLTRELVAYCNARGIATEAE--------PG----RIEGGEDGVQ- 162 (306)
T ss_dssp HHHHHHHHTC------CCCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEC--------SS----BCCCCBTTBC-
T ss_pred HHHHHHHHhhhhccCCCCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEE--------ee----eeccccCCcc-
Confidence 457788888 99999998888898888999999999999998876542 11 111 111000
Q ss_pred HHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEe--ccccCCCCCCCCccCCHHHHHHHHHcC--CCCEEEECCCC--c
Q 010240 393 TARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGC--GGVYPTNTKANNLTVGLDGLKTVCLAS--KLPVVAIGGIG--I 466 (514)
Q Consensus 393 ~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~--~~vf~t~~k~~~~~~g~~~l~~~~~~~--~~pv~a~GGi~--~ 466 (514)
..-.... -..+|+|+.+-.+.|+|.+.+ |.+.- ..|++.+.+.++.|+++.+.+ ++|++-=||-. .
T Consensus 163 ---~~~~~~~----~yT~Peea~~Fv~TgvD~LAvaiGt~HG-~Yk~~~p~Ld~~~L~~I~~~v~~~vpLVlHGgSG~p~ 234 (306)
T 3pm6_A 163 ---DTVDLEG----VLTTPEESEEFVATGINWLAPAFGNVHG-NYGPRGVQLDYERLQRINEAVGERVGLVLHGADPFTK 234 (306)
T ss_dssp ---CCTTCCC----BCCCHHHHHHHHTTTCSEECCCSSCCSS-CCCTTCCCCCHHHHHHHHHHHTTTSEEEECSCTTCCH
T ss_pred ---ccccccc----cCCCHHHHHHHHHcCCCEEEEEcCcccc-CcCCCCCccCHHHHHHHHHHhCCCCCEEeeCCCCCCH
Confidence 0000011 135799998877899998755 33321 123334568899999999887 79999998764 6
Q ss_pred ccHHHHHHCCCCCCceEEEeeccc-----------CCCCHHHHHHHHHHHHHH
Q 010240 467 SNASDVMKIGVSNLKGVAVVSALF-----------DRECILPESKKLHAVLMD 508 (514)
Q Consensus 467 ~~~~~~~~~Ga~~~~gva~~~~i~-----------~~~~~~~~~~~~~~~~~~ 508 (514)
+++.++.+.|.. -|=+.+.+. ...+|++....-++.+++
T Consensus 235 e~i~~ai~~GV~---KiNi~Tdl~~a~~~~~r~~~~~~~~~~~~~~~~~a~~~ 284 (306)
T 3pm6_A 235 EIFEKCIERGVA---KVNVNRAVNNEYVKVMREKAGSLPITRLHEEVTNAMQA 284 (306)
T ss_dssp HHHHHHHHTTEE---EEEESHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCe---EEEeChHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Confidence 889999999988 888877663 234565555444444443
No 274
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=94.29 E-value=1.1 Score=42.36 Aligned_cols=138 Identities=17% Similarity=0.170 Sum_probs=89.2
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCC-------CCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCC
Q 010240 318 RSITDAVKAALEGGATIIQLREKD-------ADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMP 390 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~ 390 (514)
++..+.+.++.+.|+..|+|=... .+.+++.+.++.+.......|.++.|+.+.+... .+. ....
T Consensus 92 ~~~~~~v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~-~~~-------g~~~ 163 (275)
T 2ze3_A 92 EDVRRTVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFL-KGH-------GATD 163 (275)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTT-TTC-------SSSH
T ss_pred HHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhh-ccc-------cccc
Confidence 356778888999999999997664 3455566666655554444467776665433211 010 0000
Q ss_pred HHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCcccHH
Q 010240 391 ARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGISNAS 470 (514)
Q Consensus 391 ~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~~~~~ 470 (514)
...... .++.++...+.|||.|++=.+ ...+.++++++.+++|+...++-..-+..
T Consensus 164 ~~~~~~-------------ai~Ra~ay~eAGAd~i~~e~~-----------~~~~~~~~i~~~~~~P~n~~~~~~~~~~~ 219 (275)
T 2ze3_A 164 EERLAE-------------TVRRGQAYADAGADGIFVPLA-----------LQSQDIRALADALRVPLNVMAFPGSPVPR 219 (275)
T ss_dssp HHHHHH-------------HHHHHHHHHHTTCSEEECTTC-----------CCHHHHHHHHHHCSSCEEEECCTTSCCHH
T ss_pred hhhHHH-------------HHHHHHHHHHCCCCEEEECCC-----------CCHHHHHHHHHhcCCCEEEecCCCCCCHH
Confidence 000110 144566777899999965221 24688899999999999888765555789
Q ss_pred HHHHCCCCCCceEEEeeccc
Q 010240 471 DVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 471 ~~~~~Ga~~~~gva~~~~i~ 490 (514)
++.++|+. -|..+...+
T Consensus 220 eL~~lGv~---~v~~~~~~~ 236 (275)
T 2ze3_A 220 ALLDAGAA---RVSFGQSLM 236 (275)
T ss_dssp HHHHTTCS---EEECTTHHH
T ss_pred HHHHcCCc---EEEEChHHH
Confidence 99999999 888877766
No 275
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=94.27 E-value=0.052 Score=53.41 Aligned_cols=46 Identities=17% Similarity=0.239 Sum_probs=40.5
Q ss_pred HHHHHHHHHcC--CCCEEEECCCC-cccHHHHHHCCCCCCceEEEeec-ccCC
Q 010240 444 LDGLKTVCLAS--KLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSA-LFDR 492 (514)
Q Consensus 444 ~~~l~~~~~~~--~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~-i~~~ 492 (514)
++.+.++++.+ ++||++.|||. .+++.+++.+||+ +|.++++ ++..
T Consensus 262 ~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd---~V~igra~~~~g 311 (345)
T 3oix_A 262 LANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGAS---MVQIGTALHQEG 311 (345)
T ss_dssp HHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCS---EEEESHHHHHHC
T ss_pred HHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCC---EEEEChHHHhcC
Confidence 67888888888 69999999996 8999999999999 9999999 5543
No 276
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=94.23 E-value=0.24 Score=45.41 Aligned_cols=143 Identities=13% Similarity=0.067 Sum_probs=83.7
Q ss_pred ceEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcC-----CCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHh
Q 010240 302 LFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREK-----DADTRGFLEAAKACLQICCVHGVPLLINDRIDIALA 376 (514)
Q Consensus 302 ~~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~ 376 (514)
.++--+++-+.-....+.-..-++. ++.|++-|-+-.+ +.+.+...+.++++.+.|....+++|+....
T Consensus 51 v~v~tvigFP~G~~~~~~k~~E~~~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~----- 124 (226)
T 1vcv_A 51 VKLCVVADFPFGALPTASRIALVSR-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPY----- 124 (226)
T ss_dssp SEEEEEESTTTCCSCHHHHHHHHHH-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGG-----
T ss_pred CeEEEEeCCCCCCCchHHHHHHHHH-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccC-----
Confidence 5565566433211001112234566 8999988876443 6677777888888888887666677774311
Q ss_pred CCCCeEEeCCCCCCHHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCC------C-CCCCCccCCHHHHHH
Q 010240 377 CDADGVHLGQSDMPARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPT------N-TKANNLTVGLDGLKT 449 (514)
Q Consensus 377 ~ga~gvhl~~~~~~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t------~-~k~~~~~~g~~~l~~ 449 (514)
+...+++ .-++.+.+.|+|||=.|.-|.. . ...++..-..+.+++
T Consensus 125 ------------Lt~eei~----------------~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~ 176 (226)
T 1vcv_A 125 ------------LRDEERY----------------TLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIAR 176 (226)
T ss_dssp ------------CCHHHHH----------------HHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHH
T ss_pred ------------CCHHHHH----------------HHHHHHHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHH
Confidence 0111221 1255667899999966654430 0 012232223344444
Q ss_pred HHHcC--CCCEEEECCCC-cccHHHHHHC---CCC
Q 010240 450 VCLAS--KLPVVAIGGIG-ISNASDVMKI---GVS 478 (514)
Q Consensus 450 ~~~~~--~~pv~a~GGi~-~~~~~~~~~~---Ga~ 478 (514)
..+.. ++||-|.|||. .+++.+++++ |++
T Consensus 177 ~i~~~g~~v~vKaaGGirt~~~al~~i~a~~~Ga~ 211 (226)
T 1vcv_A 177 YIKEKGYRLGVKMAGGIRTREQAKAIVDAIGWGED 211 (226)
T ss_dssp HHHHHTCCCEEEEESSCCSHHHHHHHHHHHCSCSC
T ss_pred HHHHhCCCceEEEeCCCCCHHHHHHHHHHHHCCCC
Confidence 42224 59999999997 7788888888 876
No 277
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=94.16 E-value=0.43 Score=49.71 Aligned_cols=112 Identities=13% Similarity=0.124 Sum_probs=73.2
Q ss_pred CHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEc-----CcHHHHHhCCCCeEEeCCC------
Q 010240 319 SITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLIN-----DRIDIALACDADGVHLGQS------ 387 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~-----~~~~~a~~~ga~gvhl~~~------ 387 (514)
+..+.++.++++|++.|++-..........+.++++++.+. +.+++.- +..+.+.++|+|++.++..
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~--~~pvi~~~v~t~~~a~~l~~aGad~I~vg~~~G~~~~ 332 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYP--HLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCGSICI 332 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCT--TCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSCCBT
T ss_pred hhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCC--CCceEecccchHHHHHHHHHcCCCEEEECCCCCcccc
Confidence 46778889999999999995555444444455555554331 6777642 2345567889999988431
Q ss_pred -------CCC-------HHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccC
Q 010240 388 -------DMP-------ARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYP 432 (514)
Q Consensus 388 -------~~~-------~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~ 432 (514)
..+ ...+++..+...+..-.+.+..++.+|..+|||.|.+|..|-
T Consensus 333 t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kala~GAd~V~iG~~~l 391 (514)
T 1jcn_A 333 TQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGASTVMMGSLLA 391 (514)
T ss_dssp TBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTT
T ss_pred cccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHHHcCCCeeeECHHHH
Confidence 001 112333333344443467799999999999999999997664
No 278
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=94.01 E-value=0.03 Score=52.23 Aligned_cols=75 Identities=20% Similarity=0.141 Sum_probs=55.0
Q ss_pred CHH-HHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEee
Q 010240 410 TPE-EAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVS 487 (514)
Q Consensus 410 ~~~-e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~ 487 (514)
++. .++.+.+.|+|++-+.-.-.. ..+ .. ..+.++++++..++|+.+-|||. ++++..++++||+ +|.+++
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~-~~~-~~--~~~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~Gad---~V~lg~ 104 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAA-FGR-GS--NHELLAEVVGKLDVQVELSGGIRDDESLAAALATGCA---RVNVGT 104 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHH-TTS-CC--CHHHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCS---EEEECH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCccc-ccC-CC--hHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCC---EEEECc
Confidence 444 456677899999965311000 011 11 12888999988899999999997 6889999999999 999999
Q ss_pred cccC
Q 010240 488 ALFD 491 (514)
Q Consensus 488 ~i~~ 491 (514)
..+.
T Consensus 105 ~~l~ 108 (244)
T 2y88_A 105 AALE 108 (244)
T ss_dssp HHHH
T ss_pred hHhh
Confidence 8774
No 279
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=94.01 E-value=0.14 Score=48.03 Aligned_cols=81 Identities=17% Similarity=0.144 Sum_probs=53.8
Q ss_pred hCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEEECCCC--cccHHHHHHCCCCC-Cce--EEEeecccCC
Q 010240 419 IDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVAIGGIG--ISNASDVMKIGVSN-LKG--VAVVSALFDR 492 (514)
Q Consensus 419 ~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a~GGi~--~~~~~~~~~~Ga~~-~~g--va~~~~i~~~ 492 (514)
+.|.|-+++|.-. .+.++.+++.+ +.+++ .=||. -.+..+++++|++. -.+ +.+|+.|+.+
T Consensus 168 ~~g~~GvV~~at~------------~~e~~~ir~~~~~~~~l-~PGIg~qg~tp~~a~~~G~d~~~~~~livvGR~I~~A 234 (255)
T 3qw3_A 168 VNGNVGLVVGATD------------PVALARVRARAPTLWFL-VPGIGAQGGSLKASLDAGLRADGSGMLINVSRGLARA 234 (255)
T ss_dssp GGSCEEEEECSSC------------HHHHHHHHHHCSSCCEE-ECCC-----CHHHHHHHHCCTTSCCEEEEESHHHHTS
T ss_pred hhCCeEEEECCCC------------HHHHHHHHHHCCCCeEE-ECCcCCCCCCHHHHHHcCCCcccCeeEEEeChhhcCC
Confidence 3667766665411 23445555544 34554 33443 34788888888771 002 8999999999
Q ss_pred CCHHHHHHHHHHHHHHHhhh
Q 010240 493 ECILPESKKLHAVLMDAVQR 512 (514)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~ 512 (514)
+||.++++++++.+++.+++
T Consensus 235 ~dp~~aa~~i~~~i~~~~~~ 254 (255)
T 3qw3_A 235 ADPRAAAKELCEEINAIRFA 254 (255)
T ss_dssp SCHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHhc
Confidence 99999999999999987765
No 280
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=93.84 E-value=0.25 Score=45.42 Aligned_cols=92 Identities=15% Similarity=0.185 Sum_probs=62.5
Q ss_pred hCCCCeEEeCCCCCC----HHHHHhhcCCCcEEEEec-CCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHH
Q 010240 376 ACDADGVHLGQSDMP----ARTARALLGPDKIIGVSC-KTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTV 450 (514)
Q Consensus 376 ~~ga~gvhl~~~~~~----~~~~~~~~~~~~~ig~s~-~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~ 450 (514)
+.|+..+-++..... ...+++.+ ++.++|+.+ -|.++++.|.+.|+|||.. |- ...+.++..
T Consensus 57 ~gGi~~iEvt~~t~~a~e~I~~l~~~~-~~~~iGaGTVlt~~~a~~Ai~AGA~fIvs-P~-----------~~~~vi~~~ 123 (232)
T 4e38_A 57 ENGLPAAEITFRSDAAVEAIRLLRQAQ-PEMLIGAGTILNGEQALAAKEAGATFVVS-PG-----------FNPNTVRAC 123 (232)
T ss_dssp HTTCCEEEEETTSTTHHHHHHHHHHHC-TTCEEEEECCCSHHHHHHHHHHTCSEEEC-SS-----------CCHHHHHHH
T ss_pred HCCCCEEEEeCCCCCHHHHHHHHHHhC-CCCEEeECCcCCHHHHHHHHHcCCCEEEe-CC-----------CCHHHHHHH
Confidence 345555555443332 22344444 468888754 5899999999999999943 21 235555554
Q ss_pred HHcCCCCEEEECCCCcccHHHHHHCCCCCCceEEE
Q 010240 451 CLASKLPVVAIGGIGISNASDVMKIGVSNLKGVAV 485 (514)
Q Consensus 451 ~~~~~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~ 485 (514)
++ .++|+++ |=.|++.+..++++|++ .|.+
T Consensus 124 ~~-~gi~~ip-Gv~TptEi~~A~~~Gad---~vK~ 153 (232)
T 4e38_A 124 QE-IGIDIVP-GVNNPSTVEAALEMGLT---TLKF 153 (232)
T ss_dssp HH-HTCEEEC-EECSHHHHHHHHHTTCC---EEEE
T ss_pred HH-cCCCEEc-CCCCHHHHHHHHHcCCC---EEEE
Confidence 44 4888888 55589999999999999 7754
No 281
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=93.64 E-value=0.031 Score=52.23 Aligned_cols=72 Identities=19% Similarity=0.202 Sum_probs=54.6
Q ss_pred CHHH-HHHhhhCCCcEEEecc---ccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEE
Q 010240 410 TPEE-AHQAWIDGANYIGCGG---VYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVA 484 (514)
Q Consensus 410 ~~~e-~~~a~~~g~d~v~~~~---vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva 484 (514)
++.+ ++.+.+.|+|++-+.- .|. + .. .- +.++++++..++|+++-|||+ ++++..++++||+ +|.
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~----~-~~-~~-~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~Gad---~V~ 102 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFG----T-GD-NR-ALIAEVAQAMDIKVELSGGIRDDDTLAAALATGCT---RVN 102 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHT----S-CC-CH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCS---EEE
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhc----C-CC-hH-HHHHHHHHhcCCcEEEECCcCCHHHHHHHHHcCCC---EEE
Confidence 4444 5666789999996521 121 1 11 12 778899888899999999997 7889999999999 999
Q ss_pred EeecccC
Q 010240 485 VVSALFD 491 (514)
Q Consensus 485 ~~~~i~~ 491 (514)
+++..+.
T Consensus 103 lg~~~l~ 109 (244)
T 1vzw_A 103 LGTAALE 109 (244)
T ss_dssp ECHHHHH
T ss_pred ECchHhh
Confidence 9998774
No 282
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=93.55 E-value=2.9 Score=39.84 Aligned_cols=64 Identities=16% Similarity=0.117 Sum_probs=49.2
Q ss_pred HHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEE---CCCC-cccHHHHHHCCCCCCceEEEeec
Q 010240 413 EAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAI---GGIG-ISNASDVMKIGVSNLKGVAVVSA 488 (514)
Q Consensus 413 e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~---GGi~-~~~~~~~~~~Ga~~~~gva~~~~ 488 (514)
.++...++|||.|++-.+ ..++.++++++.+++|+++- ||-+ .-+..++.++|+. .|..+..
T Consensus 172 ra~ay~eAGAd~i~~e~~-----------~~~~~~~~i~~~~~iP~~~N~~~~g~~p~~~~~eL~~~G~~---~v~~~~~ 237 (295)
T 1xg4_A 172 RAQAYVEAGAEMLFPEAI-----------TELAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVA---MALYPLS 237 (295)
T ss_dssp HHHHHHHTTCSEEEETTC-----------CSHHHHHHHHHHHCSCBEEECCSSSSSCCCCHHHHHHTTCS---EEEESSH
T ss_pred HHHHHHHcCCCEEEEeCC-----------CCHHHHHHHHHHcCCCEEEEecccCCCCCCCHHHHHHcCCC---EEEEChH
Confidence 355677999999977331 14788899998889998652 4444 3578999999999 9999988
Q ss_pred cc
Q 010240 489 LF 490 (514)
Q Consensus 489 i~ 490 (514)
.+
T Consensus 238 ~~ 239 (295)
T 1xg4_A 238 AF 239 (295)
T ss_dssp HH
T ss_pred HH
Confidence 77
No 283
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=93.12 E-value=0.17 Score=47.67 Aligned_cols=72 Identities=18% Similarity=0.015 Sum_probs=57.2
Q ss_pred cCCHHHH-HHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCcccHHHHHHCCCCCCceEEEe
Q 010240 408 CKTPEEA-HQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGISNASDVMKIGVSNLKGVAVV 486 (514)
Q Consensus 408 ~~~~~e~-~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~ 486 (514)
..+|.++ +...+.|+|.+ ++..-. +...+.++++++..++|+..-|||+..++..++ +|++ -|.++
T Consensus 37 ~~dp~~~A~~~~~~Ga~~l---~vvDL~------~~n~~~i~~i~~~~~~pv~vgGGir~~~~~~~l-~Ga~---~Viig 103 (260)
T 2agk_A 37 QHPSSYYAKLYKDRDVQGC---HVIKLG------PNNDDAAREALQESPQFLQVGGGINDTNCLEWL-KWAS---KVIVT 103 (260)
T ss_dssp CCCHHHHHHHHHHTTCTTC---EEEEES------SSCHHHHHHHHHHSTTTSEEESSCCTTTHHHHT-TTCS---CEEEC
T ss_pred CCCHHHHHHHHHHcCCCEE---EEEeCC------CCCHHHHHHHHhcCCceEEEeCCCCHHHHHHHh-cCCC---EEEEC
Confidence 4577774 55668899988 443311 135788999998889999999999977999999 9999 99999
Q ss_pred ecccCC
Q 010240 487 SALFDR 492 (514)
Q Consensus 487 ~~i~~~ 492 (514)
|+.+..
T Consensus 104 s~a~~~ 109 (260)
T 2agk_A 104 SWLFTK 109 (260)
T ss_dssp GGGBCT
T ss_pred cHHHhh
Confidence 998864
No 284
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=93.01 E-value=0.49 Score=48.67 Aligned_cols=113 Identities=19% Similarity=0.198 Sum_probs=78.6
Q ss_pred CHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcC-----cHHHHHhCCCCeEEeCCCCC----
Q 010240 319 SITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLIND-----RIDIALACDADGVHLGQSDM---- 389 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~-----~~~~a~~~ga~gvhl~~~~~---- 389 (514)
+..+.+++++++|++++.+...+......++.++.+++... ++.++.-+ -.+...++|||+|-++-..-
T Consensus 281 d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p--~~~viaGNVaT~e~a~~Li~aGAD~vkVGiGpGSiCt 358 (556)
T 4af0_A 281 GDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYP--KIDVIAGNVVTREQAAQLIAAGADGLRIGMGSGSICI 358 (556)
T ss_dssp HHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCT--TSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBC
T ss_pred cHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCC--cceEEeccccCHHHHHHHHHcCCCEEeecCCCCcccc
Confidence 46788999999999999998888777777777777765432 45665421 23344577999998765321
Q ss_pred ---------C-------HHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCC
Q 010240 390 ---------P-------ARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPT 433 (514)
Q Consensus 390 ---------~-------~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t 433 (514)
+ ...+++.++...+-=-.+.+.-++.+|..+|||+|.+|..|..
T Consensus 359 Tr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~KAlaaGAd~VMlGsllAG 418 (556)
T 4af0_A 359 TQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKALALGASAVMMGGLLAG 418 (556)
T ss_dssp CTTTCCSCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred cccccCCCCcHHHHHHHHHHHHHHcCCCEEecCCcCcchHHHHHhhcCCCEEEEchhhcc
Confidence 1 1222333333334334577999999999999999999999963
No 285
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=92.98 E-value=1.4 Score=41.57 Aligned_cols=180 Identities=18% Similarity=0.178 Sum_probs=109.5
Q ss_pred eEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEE--cCCCCHHH----HHHHHHHHHHHHhhcCceEEE----cCcHH
Q 010240 303 FLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLR--EKDADTRG----FLEAAKACLQICCVHGVPLLI----NDRID 372 (514)
Q Consensus 303 ~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr--~~~~~~~~----~~~~~~~~~~~~~~~~~~l~v----~~~~~ 372 (514)
++|+|..+.... ..+...+.++++.+.|++++..- .+..++.. -.+..+.+.+.|++.|++++. ..+++
T Consensus 38 ~~~vIAgpc~~~-~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~Gl~~~te~~d~~~~~ 116 (276)
T 1vs1_A 38 SKAVIAGPCSVE-SWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEAGLPVVTEVLDPRHVE 116 (276)
T ss_dssp BCEEEEECSBCC-CHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCCEEEECCCGGGHH
T ss_pred CeEEEEecCCCC-CHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHcCCcEEEecCCHHHHH
Confidence 477777554332 12457778888889999987542 22111100 034456677889999998875 23577
Q ss_pred HHHhCCCCeEEeCCCCCCHH-HHHhh--cCCCcEEEEecC-CHHHHHHhh----hCCC-cEEEec--c-ccCCCCCCCCc
Q 010240 373 IALACDADGVHLGQSDMPAR-TARAL--LGPDKIIGVSCK-TPEEAHQAW----IDGA-NYIGCG--G-VYPTNTKANNL 440 (514)
Q Consensus 373 ~a~~~ga~gvhl~~~~~~~~-~~~~~--~~~~~~ig~s~~-~~~e~~~a~----~~g~-d~v~~~--~-vf~t~~k~~~~ 440 (514)
.+.++ ++.+-++..+.... .++.. .+...++..... |++|+..|. ..|- +.+++- . -||+.. ..
T Consensus 117 ~l~~~-vd~~kIgs~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~---~~ 192 (276)
T 1vs1_A 117 TVSRY-ADMLQIGARNMQNFPLLREVGRSGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPST---RF 192 (276)
T ss_dssp HHHHH-CSEEEECGGGTTCHHHHHHHHHHTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSS---SS
T ss_pred HHHHh-CCeEEECcccccCHHHHHHHHccCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcC---cc
Confidence 77777 89999998765433 23322 233444444444 788877665 4575 555442 1 344311 33
Q ss_pred cCCHHHHHHHHHcCCCCEEEE----CCCC---cccHHHHHHCCCCCCceEEEeeccc
Q 010240 441 TVGLDGLKTVCLASKLPVVAI----GGIG---ISNASDVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 441 ~~g~~~l~~~~~~~~~pv~a~----GGi~---~~~~~~~~~~Ga~~~~gva~~~~i~ 490 (514)
.+.+..+..+++.+++||+.. +|.. ..-......+||+ |+.+-+-+.
T Consensus 193 ~vdl~~i~~lk~~~~lpVi~dssH~~g~~~~~~~~~~aAva~Ga~---Gl~IE~H~~ 246 (276)
T 1vs1_A 193 TLDVAAVAVLKEATHLPVIVDPSHPAGRRSLVPALAKAGLAAGAD---GLIVEVHPN 246 (276)
T ss_dssp BCBHHHHHHHHHHBSSCEEECCHHHHCSGGGHHHHHHHHHHTTCS---EEEEEBCSS
T ss_pred hhCHHHHHHHHHHhCCCEEEeCCCCCCccchHHHHHHHHHHcCCC---EEEEEecCC
Confidence 467788888888779997542 2322 1223455778999 999998874
No 286
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=92.98 E-value=1.6 Score=40.73 Aligned_cols=132 Identities=18% Similarity=0.156 Sum_probs=85.3
Q ss_pred HHHHHHHHhCCCCEEEEEcCC-------CCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHHH
Q 010240 321 TDAVKAALEGGATIIQLREKD-------ADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPART 393 (514)
Q Consensus 321 ~~~~~~~~~~Gv~~v~lr~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~~ 393 (514)
.+.+.++.+.|+..|.|=... .+.+++.+.++.+.......|.++.|+.+.+.... | ..+.. ..
T Consensus 96 ~~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~-g-------~~~~~-~~ 166 (255)
T 2qiw_A 96 ADLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKL-G-------ADVFE-DP 166 (255)
T ss_dssp HHHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHH-C-------TTTSS-SH
T ss_pred HHHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhc-c-------CCcch-HH
Confidence 677888899999999995542 23455666666665544444778777776554211 1 01000 00
Q ss_pred HHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCc----ccH
Q 010240 394 ARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGI----SNA 469 (514)
Q Consensus 394 ~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~----~~~ 469 (514)
..+ ..+.++...+.|||.|++=.+ ...+.++++.+.+++|+....+-.. -+.
T Consensus 167 ~~~-------------ai~ra~a~~eAGAd~i~~e~~-----------~~~~~~~~i~~~~~~P~n~~~~~~~~~p~~~~ 222 (255)
T 2qiw_A 167 MVE-------------AIKRIKLMEQAGARSVYPVGL-----------STAEQVERLVDAVSVPVNITAHPVDGHGAGDL 222 (255)
T ss_dssp HHH-------------HHHHHHHHHHHTCSEEEECCC-----------CSHHHHHHHHTTCSSCBEEECBTTTBBTTBCH
T ss_pred HHH-------------HHHHHHHHHHcCCcEEEEcCC-----------CCHHHHHHHHHhCCCCEEEEecCCCCCCCCCH
Confidence 111 245577778999999977221 1367889999988999888744332 468
Q ss_pred HHHHHCCCCCCceEEEeec
Q 010240 470 SDVMKIGVSNLKGVAVVSA 488 (514)
Q Consensus 470 ~~~~~~Ga~~~~gva~~~~ 488 (514)
.++.++|+. -|..+..
T Consensus 223 ~eL~~lGv~---~v~~~~~ 238 (255)
T 2qiw_A 223 ATLAGLGVR---RVTFGPL 238 (255)
T ss_dssp HHHHHTTCC---EEECTTH
T ss_pred HHHHHcCCC---EEEEHHH
Confidence 999999999 8877655
No 287
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=92.85 E-value=1.4 Score=40.21 Aligned_cols=74 Identities=23% Similarity=0.258 Sum_probs=53.2
Q ss_pred HHhhcCCCcEEEEec-CCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCcccHHHH
Q 010240 394 ARALLGPDKIIGVSC-KTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGISNASDV 472 (514)
Q Consensus 394 ~~~~~~~~~~ig~s~-~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~~~~~~~ 472 (514)
+++.+ ++..+|+.+ .+.+++..|.+.|||++..+. ...+.++..++ .++|+++ |=-|++.+.++
T Consensus 62 l~~~~-~~l~vgaGtvl~~d~~~~A~~aGAd~v~~p~------------~d~~v~~~ar~-~g~~~i~-Gv~t~~e~~~A 126 (224)
T 1vhc_A 62 LRANR-PDFLIAAGTVLTAEQVVLAKSSGADFVVTPG------------LNPKIVKLCQD-LNFPITP-GVNNPMAIEIA 126 (224)
T ss_dssp HHHHC-TTCEEEEESCCSHHHHHHHHHHTCSEEECSS------------CCHHHHHHHHH-TTCCEEC-EECSHHHHHHH
T ss_pred HHHhC-cCcEEeeCcEeeHHHHHHHHHCCCCEEEECC------------CCHHHHHHHHH-hCCCEEe-ccCCHHHHHHH
Confidence 44444 477887755 488999999999999994321 12444555555 7788776 53358888899
Q ss_pred HHCCCCCCceEEE
Q 010240 473 MKIGVSNLKGVAV 485 (514)
Q Consensus 473 ~~~Ga~~~~gva~ 485 (514)
.+.|++ .|.+
T Consensus 127 ~~~Gad---~vk~ 136 (224)
T 1vhc_A 127 LEMGIS---AVKF 136 (224)
T ss_dssp HHTTCC---EEEE
T ss_pred HHCCCC---EEEE
Confidence 999999 8877
No 288
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=92.83 E-value=1.1 Score=43.83 Aligned_cols=157 Identities=15% Similarity=0.142 Sum_probs=103.0
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCC------------------HHHH-------HHHHHHHHHHHhhcCceEEE--cC-
Q 010240 318 RSITDAVKAALEGGATIIQLREKDAD------------------TRGF-------LEAAKACLQICCVHGVPLLI--ND- 369 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~------------------~~~~-------~~~~~~~~~~~~~~~~~l~v--~~- 369 (514)
+...+.++.+.++|+++|-+....+. ..++ .+..+.+.+.|++.|+.++- .|
T Consensus 35 e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~Gi~~~st~~d~ 114 (349)
T 2wqp_A 35 KTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESKGMIFISTLFSR 114 (349)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEEECSH
T ss_pred HHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHhCCeEEEeeCCH
Confidence 55778888899999999987422110 0011 23456788899999998874 23
Q ss_pred -cHHHHHhCCCCeEEeCCCCCC-HHHHHhh--cCCCcEEEEecCCHHHHHHhh----hCCCcEEEec--cccCCCCCCCC
Q 010240 370 -RIDIALACDADGVHLGQSDMP-ARTARAL--LGPDKIIGVSCKTPEEAHQAW----IDGANYIGCG--GVYPTNTKANN 439 (514)
Q Consensus 370 -~~~~a~~~ga~gvhl~~~~~~-~~~~~~~--~~~~~~ig~s~~~~~e~~~a~----~~g~d~v~~~--~vf~t~~k~~~ 439 (514)
+++...+++++.+-+++.+.. ...+++. .+.+.++...-.|.+|+..|. +.|.+++++. .-||| + .
T Consensus 115 ~svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstGmat~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~---~-~ 190 (349)
T 2wqp_A 115 AAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSIESIKKSVEIIREAGVPYALLHCTNIYPT---P-Y 190 (349)
T ss_dssp HHHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEECCCCSSC---C-G
T ss_pred HHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeccCCCCC---C-h
Confidence 567777889999999987653 3333333 344555555455999977765 4567888773 11332 1 3
Q ss_pred ccCCHHHHHHHHHcC-CCCEEEECCCC-cccHHHHHHCCCC
Q 010240 440 LTVGLDGLKTVCLAS-KLPVVAIGGIG-ISNASDVMKIGVS 478 (514)
Q Consensus 440 ~~~g~~~l~~~~~~~-~~pv~a~GGi~-~~~~~~~~~~Ga~ 478 (514)
..+.+..+..+++.+ ++||.-.+--. ..-......+||+
T Consensus 191 ~~~nL~ai~~lk~~f~~lpVg~sdHt~G~~~~~AAvAlGA~ 231 (349)
T 2wqp_A 191 EDVRLGGMNDLSEAFPDAIIGLSDHTLDNYACLGAVALGGS 231 (349)
T ss_dssp GGCCTHHHHHHHHHCTTSEEEEECCSSSSHHHHHHHHHTCC
T ss_pred hhcCHHHHHHHHHHCCCCCEEeCCCCCcHHHHHHHHHhCCC
Confidence 457889999999998 89985444332 2334456778988
No 289
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=92.66 E-value=0.045 Score=54.92 Aligned_cols=78 Identities=12% Similarity=-0.044 Sum_probs=49.2
Q ss_pred hhCC--CcEEEec-cccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCccc-HHHHHH----CCCCCCceEEEeecc
Q 010240 418 WIDG--ANYIGCG-GVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGISN-ASDVMK----IGVSNLKGVAVVSAL 489 (514)
Q Consensus 418 ~~~g--~d~v~~~-~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~~~-~~~~~~----~Ga~~~~gva~~~~i 489 (514)
.+.| +|||-++ +-+..... ..+...++.+..+++..+.||++.|||+.+. +.++++ -+++ .|++|+.+
T Consensus 274 ~~~G~~l~ylhv~~~~~~~~~~-~~~~~~~~~~~~ir~~~~~PvI~~Ggi~~~~dA~~~i~~~~~g~aD---lVa~GR~~ 349 (407)
T 3tjl_A 274 ADKGQGIAYISVVEPRVSGNVD-VSEEDQAGDNEFVSKIWKGVILKAGNYSYDAPEFKTLKEDIADKRT---LVGFSRYF 349 (407)
T ss_dssp HHTTCCCSEEEEECTTEETTEE-CCGGGCCCCSHHHHHHCCSEEEEESCGGGGTTTTHHHHHHHTTSSE---EEECSHHH
T ss_pred hhcCCceeEEEEEccccCCCCc-CCccchhHHHHHHHHHhCCCEEecCCCCCHHHHHHHHHhhccCCCe---EEEeChhh
Confidence 5678 9999765 22111100 0111112334556666789999999998554 545444 4588 99999999
Q ss_pred cCCCCHHHHH
Q 010240 490 FDRECILPES 499 (514)
Q Consensus 490 ~~~~~~~~~~ 499 (514)
+.++|....+
T Consensus 350 iaNPdL~~ri 359 (407)
T 3tjl_A 350 TSNPNLVWKL 359 (407)
T ss_dssp HHCTTHHHHH
T ss_pred hhCchHHHHH
Confidence 9888765544
No 290
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=92.59 E-value=0.082 Score=49.33 Aligned_cols=80 Identities=13% Similarity=0.094 Sum_probs=59.2
Q ss_pred cCCHHH-HHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEE
Q 010240 408 CKTPEE-AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAV 485 (514)
Q Consensus 408 ~~~~~e-~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~ 485 (514)
..+|-+ ++.-.+.|+|.+.+ ..-..-........+.++++++.+.+|+..-|||. .+++..++++|++ -|.+
T Consensus 30 ~~dP~~~a~~~~~~gad~lhv---vDld~a~~~~~~~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~Gad---kVii 103 (243)
T 4gj1_A 30 KYNPLKKFKEYEKAGAKELHL---VDLTGAKDPSKRQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVK---RVVI 103 (243)
T ss_dssp CCCHHHHHHHHHHHTCCEEEE---EEHHHHHCGGGCCHHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTTCS---EEEE
T ss_pred CCCHHHHHHHHHHCCCCEEEE---EecCcccccchhHHHHHHHHHHhcCCCeEeccccccHHHHHHHHHcCCC---EEEE
Confidence 346766 44455789999844 32110001123467889999999999999999996 7999999999999 9999
Q ss_pred eecccCCC
Q 010240 486 VSALFDRE 493 (514)
Q Consensus 486 ~~~i~~~~ 493 (514)
++..+..+
T Consensus 104 ~t~a~~~p 111 (243)
T 4gj1_A 104 GSMAIKDA 111 (243)
T ss_dssp CTTTTTCH
T ss_pred ccccccCC
Confidence 99888543
No 291
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=92.56 E-value=0.33 Score=44.06 Aligned_cols=90 Identities=17% Similarity=0.184 Sum_probs=62.2
Q ss_pred HHHhhcCCCcEEEEec-CCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCC------CEEEECCCC
Q 010240 393 TARALLGPDKIIGVSC-KTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKL------PVVAIGGIG 465 (514)
Q Consensus 393 ~~~~~~~~~~~ig~s~-~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~------pv~a~GGi~ 465 (514)
.+++.+ ++.++|+.+ .|.++++.+.+.|++|++ +|. ...+.++..++ .++ |+++ |-.|
T Consensus 57 ~l~~~~-p~~~IGAGTVlt~~~a~~ai~AGA~fiv-sP~-----------~~~evi~~~~~-~~v~~~~~~~~~P-G~~T 121 (217)
T 3lab_A 57 AIKKAV-PEAIVGAGTVCTADDFQKAIDAGAQFIV-SPG-----------LTPELIEKAKQ-VKLDGQWQGVFLP-GVAT 121 (217)
T ss_dssp HHHHHC-TTSEEEEECCCSHHHHHHHHHHTCSEEE-ESS-----------CCHHHHHHHHH-HHHHCSCCCEEEE-EECS
T ss_pred HHHHHC-CCCeEeeccccCHHHHHHHHHcCCCEEE-eCC-----------CcHHHHHHHHH-cCCCccCCCeEeC-CCCC
Confidence 445555 568899765 599999999999999994 343 23566655544 367 8888 5578
Q ss_pred cccHHHHHHCCCCCCceEEEeecccCCCC--HHHHHHHHHH
Q 010240 466 ISNASDVMKIGVSNLKGVAVVSALFDREC--ILPESKKLHA 504 (514)
Q Consensus 466 ~~~~~~~~~~Ga~~~~gva~~~~i~~~~~--~~~~~~~~~~ 504 (514)
++.+..++++|++ .+- +|.++. -.+.+++++.
T Consensus 122 ptE~~~A~~~Gad---~vK----~FPa~~~gG~~~lkal~~ 155 (217)
T 3lab_A 122 ASEVMIAAQAGIT---QLK----CFPASAIGGAKLLKAWSG 155 (217)
T ss_dssp HHHHHHHHHTTCC---EEE----ETTTTTTTHHHHHHHHHT
T ss_pred HHHHHHHHHcCCC---EEE----ECccccccCHHHHHHHHh
Confidence 9999999999999 773 454432 1345555443
No 292
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=92.49 E-value=0.71 Score=43.63 Aligned_cols=106 Identities=16% Similarity=0.124 Sum_probs=71.0
Q ss_pred HHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEE--cC--cHHHHHhCCCCeEEeCCCCC-------C-
Q 010240 323 AVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLI--ND--RIDIALACDADGVHLGQSDM-------P- 390 (514)
Q Consensus 323 ~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v--~~--~~~~a~~~ga~gvhl~~~~~-------~- 390 (514)
.++.+...|++.|.|-....+.+++.+ +.+.++.+|..+++ ++ ..+.|.++|++.+=++..++ .
T Consensus 127 qv~~A~~~GAD~VlLi~a~l~~~~l~~----l~~~a~~lGl~~lvev~t~ee~~~A~~~Gad~IGv~~r~l~~~~~dl~~ 202 (272)
T 3qja_A 127 QIHEARAHGADMLLLIVAALEQSVLVS----MLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARDLMTLDVDRDC 202 (272)
T ss_dssp HHHHHHHTTCSEEEEEGGGSCHHHHHH----HHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEEESBCTTTCCBCTTH
T ss_pred HHHHHHHcCCCEEEEecccCCHHHHHH----HHHHHHHCCCcEEEEcCCHHHHHHHHHCCCCEEEECCCcccccccCHHH
Confidence 467888999999999777777655443 44566678887664 33 34456788999776554331 1
Q ss_pred HHHHHhhcCCCc--EEEEecCCHHHHHHhhhCCCcEEEeccccC
Q 010240 391 ARTARALLGPDK--IIGVSCKTPEEAHQAWIDGANYIGCGGVYP 432 (514)
Q Consensus 391 ~~~~~~~~~~~~--~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~ 432 (514)
...+....+.+. +.+...+|++++..+.+.|+|-+++|.-+-
T Consensus 203 ~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~GadgvlVGsal~ 246 (272)
T 3qja_A 203 FARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLV 246 (272)
T ss_dssp HHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred HHHHHHhCcccCEEEEECCCCCHHHHHHHHHcCCCEEEEcHHHh
Confidence 123333332233 334445789999999999999999997664
No 293
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=92.31 E-value=1.8 Score=40.44 Aligned_cols=162 Identities=14% Similarity=0.011 Sum_probs=91.6
Q ss_pred HHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEE--cC----cHHHHHhCCCCeEEeCCCCCCHH--H
Q 010240 322 DAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLI--ND----RIDIALACDADGVHLGQSDMPAR--T 393 (514)
Q Consensus 322 ~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v--~~----~~~~a~~~ga~gvhl~~~~~~~~--~ 393 (514)
+.++.+...|.+++.+-..+.. .+..+ ++.....+...+.+++| |+ .++.+.+.|++||.+|.-.-... .
T Consensus 31 ~~~e~a~~~gaD~v~lDlEd~p-~~~~~-a~~~~~~~~~~~~~~~VRv~~~~~~~i~~~l~~g~~gI~~P~V~s~~ev~~ 108 (256)
T 1dxe_A 31 ISTEVLGLAGFDWLVLDGEHAP-NDIST-FIPQLMALKGSASAPVVRVPTNEPVIIKRLLDIGFYNFLIPFVETKEEAEL 108 (256)
T ss_dssp HHHHHHTTSCCSEEEEESSSSS-CCHHH-HHHHHHHTTTCSSEEEEECSSSCHHHHHHHHHTTCCEEEESCCCSHHHHHH
T ss_pred HHHHHHHhCCCCEEEEcCCCCC-CCHHH-HHHHHHHHHhCCCcEEEECCCCCHHHHHHHHhcCCceeeecCcCCHHHHHH
Confidence 4677888889999999765542 22222 22222223344555655 22 24556678999999988653211 1
Q ss_pred HHhhc-----------------------------CCCcEEEEecCCHHHHHHhhh----CCCcEEEeccccCCCCCCC-C
Q 010240 394 ARALL-----------------------------GPDKIIGVSCKTPEEAHQAWI----DGANYIGCGGVYPTNTKAN-N 439 (514)
Q Consensus 394 ~~~~~-----------------------------~~~~~ig~s~~~~~e~~~a~~----~g~d~v~~~~vf~t~~k~~-~ 439 (514)
+.+.. .....+++-+-|++-+..+.+ -|+|.+++|+-=-+.+-.. .
T Consensus 109 ~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av~~~~eIa~~~~vd~l~iG~~DL~~~lg~~~ 188 (256)
T 1dxe_A 109 AVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVDAIAATEGVDGIFVGPSDLAAALGHLG 188 (256)
T ss_dssp HHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHHHTHHHHHTSTTCCEEEECHHHHHHHTTCTT
T ss_pred HHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHHHhHHHHhCCCCCCEEEEChHHHHHHhCCCC
Confidence 11111 124567777777665544332 3899999987422111110 0
Q ss_pred ccCCH---HHHHHHH---HcCCCCEEEECCCCcccHHHHHHCCCCCCceEEEeecc
Q 010240 440 LTVGL---DGLKTVC---LASKLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSAL 489 (514)
Q Consensus 440 ~~~g~---~~l~~~~---~~~~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i 489 (514)
.+... ..++.+. ...++|+....+ +++.+..+++.|++ .+.+++..
T Consensus 189 ~~~~p~v~~a~~~iv~aa~a~G~~~~v~~~-d~~~~~~~~~~G~~---~~s~~~d~ 240 (256)
T 1dxe_A 189 NASHPDVQKAIQHIFNRASAHGKPSGILAP-VEADARRYLEWGAT---FVAVGSDL 240 (256)
T ss_dssp CTTSHHHHHHHHHHHHHHHHTTCCEEEECC-SHHHHHHHHHTTCC---EEEEEEHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCceEEecC-CHHHHHHHHHcCCC---EEEechHH
Confidence 11112 2223332 334788765555 78888999999999 99998754
No 294
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=92.16 E-value=0.51 Score=46.18 Aligned_cols=110 Identities=10% Similarity=0.076 Sum_probs=69.5
Q ss_pred HHHHHHHHHhCC--CCEEEEEcCCCCHHHHHHHHHHHHHHHhhcC-ceEEE---c--CcHHHHHhCCCCeEEeCCCC---
Q 010240 320 ITDAVKAALEGG--ATIIQLREKDADTRGFLEAAKACLQICCVHG-VPLLI---N--DRIDIALACDADGVHLGQSD--- 388 (514)
Q Consensus 320 ~~~~~~~~~~~G--v~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~-~~l~v---~--~~~~~a~~~ga~gvhl~~~~--- 388 (514)
..+.++.+++.| ++++++.....+.....+.++++++ .++ .+++. . ++.+.+.++|+|+|.++..-
T Consensus 107 ~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~---~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~hgG~~ 183 (336)
T 1ypf_A 107 EYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKK---HLPESFVIAGNVGTPEAVRELENAGADATKVGIGPGKV 183 (336)
T ss_dssp HHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHH---HCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTT
T ss_pred HHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHH---hCCCCEEEECCcCCHHHHHHHHHcCCCEEEEecCCCce
Confidence 456677888999 9999886533344444555555544 443 34432 1 24566778999999884211
Q ss_pred C-------------CH---HHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccC
Q 010240 389 M-------------PA---RTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYP 432 (514)
Q Consensus 389 ~-------------~~---~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~ 432 (514)
. .. .++++......+..-.+.|.+++.+|..+|||.|.+|..|-
T Consensus 184 ~~~~~~~~~g~~g~~~~~l~~v~~~~~ipVIa~GGI~~g~Dv~kalalGAdaV~iGr~~l 243 (336)
T 1ypf_A 184 CITKIKTGFGTGGWQLAALRWCAKAASKPIIADGGIRTNGDVAKSIRFGATMVMIGSLFA 243 (336)
T ss_dssp CHHHHHHSCSSTTCHHHHHHHHHHTCSSCEEEESCCCSTHHHHHHHHTTCSEEEESGGGT
T ss_pred eecccccCcCCchhHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCCEEEeChhhh
Confidence 0 11 12233333344443367899999999999999999997665
No 295
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=92.16 E-value=1.4 Score=41.24 Aligned_cols=139 Identities=15% Similarity=0.188 Sum_probs=82.3
Q ss_pred CceEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcC-----CCCHHHHHHHHHHHHHHHhhcCce--EEEcCcHHH
Q 010240 301 DLFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREK-----DADTRGFLEAAKACLQICCVHGVP--LLINDRIDI 373 (514)
Q Consensus 301 ~~~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~-----~~~~~~~~~~~~~~~~~~~~~~~~--l~v~~~~~~ 373 (514)
..++--+++-+.-....+.-..-++.+++.|++-|-+-.+ +.+.+...+.++++.+.|..++.+ +|+.. -.+
T Consensus 68 ~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~GAdEIDmVinig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt-~~L 146 (260)
T 1p1x_A 68 EIRIATVTNFPHGNDDIDIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIET-GEL 146 (260)
T ss_dssp TSEEEEEESTTTCCSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCH-HHH
T ss_pred CceEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCEEEEeccHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEec-ccC
Confidence 4566666644321100111234466788999887766443 566777788888888888765554 35522 111
Q ss_pred HHhCCCCeEEeCCCCCCHHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHc
Q 010240 374 ALACDADGVHLGQSDMPARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLA 453 (514)
Q Consensus 374 a~~~ga~gvhl~~~~~~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~ 453 (514)
. ....++ .-++.+.+.|+|||=.|.-|.+ .+ ..++-++.+++.
T Consensus 147 -------------~--d~e~i~----------------~a~~ia~eaGADfVKTSTGf~~---~g---At~e~v~lm~~~ 189 (260)
T 1p1x_A 147 -------------K--DEALIR----------------KASEISIKAGADFIKTSTGKVA---VN---ATPESARIMMEV 189 (260)
T ss_dssp -------------C--SHHHHH----------------HHHHHHHHTTCSEEECCCSCSS---CC---CCHHHHHHHHHH
T ss_pred -------------C--cHHHHH----------------HHHHHHHHhCCCEEEeCCCCCC---CC---CCHHHHHHHHHH
Confidence 0 011111 1256677999999966554431 12 245533333333
Q ss_pred -------CCCCEEEECCCC-cccHHHHHHCCC
Q 010240 454 -------SKLPVVAIGGIG-ISNASDVMKIGV 477 (514)
Q Consensus 454 -------~~~pv~a~GGi~-~~~~~~~~~~Ga 477 (514)
.++||-|.|||. .+++..++++|+
T Consensus 190 I~~~~~g~~v~VKaaGGIrt~~~al~~i~aga 221 (260)
T 1p1x_A 190 IRDMGVEKTVGFKPAGGVRTAEDAQKYLAIAD 221 (260)
T ss_dssp HHHHTCTTTCEEECBSSCCSHHHHHHHHHHHH
T ss_pred HHHhcCCCCceEEEeCCCCCHHHHHHHHHhhh
Confidence 379999999997 778888888764
No 296
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=91.96 E-value=4.4 Score=39.48 Aligned_cols=156 Identities=12% Similarity=0.097 Sum_probs=101.3
Q ss_pred CCHHHHHHHHHhCCCC-----EEEEEcCCCCH--------------H-HH------HHHHHHHHHHHhhcCceEEEc---
Q 010240 318 RSITDAVKAALEGGAT-----IIQLREKDADT--------------R-GF------LEAAKACLQICCVHGVPLLIN--- 368 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~-----~v~lr~~~~~~--------------~-~~------~~~~~~~~~~~~~~~~~l~v~--- 368 (514)
+...+.++++.++|++ .|-+.....+. . .+ .+..+.+.+.|++.|+.++-.
T Consensus 21 e~Ak~lI~~A~~aGad~~~d~avKfQt~~~d~l~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~~~st~fD 100 (350)
T 3g8r_A 21 EHGVALIRAIRESCQGFDFDFGFKLQYRNLDTFIHSSFKGRDDVKYVKRFEETRLQPEQMQKLVAEMKANGFKAICTPFD 100 (350)
T ss_dssp HHHHHHHHHHHHHTTTCCSEEEEEEEECCHHHHBCGGGTTCCSSSSHHHHHHTCCCHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHHhCCcccCCeeEEccccchhhhcChhccCccHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCcEEeccCC
Confidence 4578888889888987 77664322110 0 11 133567888999999988642
Q ss_pred -CcHHHHHhCCCCeEEeCCCCCC-HHHHHhh--cCCCcEEEEecCCHHHHHHhh----hCCCcEEEe--ccccCCCCCCC
Q 010240 369 -DRIDIALACDADGVHLGQSDMP-ARTARAL--LGPDKIIGVSCKTPEEAHQAW----IDGANYIGC--GGVYPTNTKAN 438 (514)
Q Consensus 369 -~~~~~a~~~ga~gvhl~~~~~~-~~~~~~~--~~~~~~ig~s~~~~~e~~~a~----~~g~d~v~~--~~vf~t~~k~~ 438 (514)
..++...+++++.+-+++.+.. ...+++. .+.+.++...-.|.+|+..|. +.|.+++++ -.-|||.
T Consensus 101 ~~svd~l~~~~v~~~KI~S~~~~N~pLL~~va~~gKPviLstGmstl~Ei~~Ave~i~~~g~~viLlhC~s~YPt~---- 176 (350)
T 3g8r_A 101 EESVDLIEAHGIEIIKIASCSFTDWPLLERIARSDKPVVASTAGARREDIDKVVSFMLHRGKDLTIMHCVAEYPTP---- 176 (350)
T ss_dssp HHHHHHHHHTTCCEEEECSSSTTCHHHHHHHHTSCSCEEEECTTCCHHHHHHHHHHHHTTTCCEEEEECCCCSSCC----
T ss_pred HHHHHHHHHcCCCEEEECcccccCHHHHHHHHhhCCcEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCC----
Confidence 3678888999999999998753 2333333 344555555556999987765 357787774 2234432
Q ss_pred CccCCHHHHHHHHHcC-CCCEEEE----CCCCcccHHHHHHCCCC
Q 010240 439 NLTVGLDGLKTVCLAS-KLPVVAI----GGIGISNASDVMKIGVS 478 (514)
Q Consensus 439 ~~~~g~~~l~~~~~~~-~~pv~a~----GGi~~~~~~~~~~~Ga~ 478 (514)
...+.+..+..+++.+ ++||--. |+.. .-......+||.
T Consensus 177 ~~~~nL~aI~~Lk~~fp~lpVG~SdHt~g~~~-~~~~AAvAlGA~ 220 (350)
T 3g8r_A 177 DDHLHLARIKTLRQQYAGVRIGYSTHEDPDLM-EPIMLAVAQGAT 220 (350)
T ss_dssp GGGCCTTHHHHHHHHCTTSEEEEEECCCSSCC-HHHHHHHHTTCC
T ss_pred cccCCHHHHHHHHHHCCCCCEEcCCCCCCCcc-HHHHHHHHcCCC
Confidence 3457888899999989 7998444 2221 112367788988
No 297
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=91.85 E-value=0.32 Score=49.61 Aligned_cols=79 Identities=15% Similarity=0.100 Sum_probs=56.8
Q ss_pred hCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEEEC-CCCcccHHHHHHCCCCCCce------EEEeeccc
Q 010240 419 IDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVAIG-GIGISNASDVMKIGVSNLKG------VAVVSALF 490 (514)
Q Consensus 419 ~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a~G-Gi~~~~~~~~~~~Ga~~~~g------va~~~~i~ 490 (514)
+.|.|-+++|.-. .+.++.+++.+ +.+++.-| |..-.+..+++++|++ . +.+|+.|+
T Consensus 169 ~~g~~GvV~gat~------------~~e~~~ir~~~~~~~~l~PGig~qg~tp~~a~~~g~d---~~~~~~livvgR~I~ 233 (453)
T 3qw4_B 169 VNGNVGLVVGATD------------PVALARVRARAPTLWFLVPGIGAQGGSLKASLDAGLR---ADGSGMLINVSRGLA 233 (453)
T ss_dssp TTSCEEEEECTTC------------HHHHHHHHHHCSSCCEEECCSSTTCCCHHHHHHHHCC---TTSCCEEEEESHHHH
T ss_pred hcCCeEEEECCCC------------HHHHHHHHHhCCCCeEEECCcCCCCCCHHHHHHhcCC---cccCCceEecChhhc
Confidence 3567777665411 34455666555 45555434 3344578899999998 7 99999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhhh
Q 010240 491 DRECILPESKKLHAVLMDAVQR 512 (514)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~ 512 (514)
+++||.++++++++.+++.+++
T Consensus 234 ~A~dp~~aa~~i~~~i~~~r~~ 255 (453)
T 3qw4_B 234 RAADPRAAAKELCEEINAIRFA 255 (453)
T ss_dssp SCSCHHHHHHHHHHHHHHHHSC
T ss_pred cCCCHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999887543
No 298
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=91.85 E-value=3.3 Score=38.34 Aligned_cols=125 Identities=14% Similarity=0.064 Sum_probs=76.0
Q ss_pred CceEEEEeCCCCCccCCCCHHHHHHHHHh--CCCCEEEEEcC------CCCHHHHHHHHHHHHHHHhhcCceEE--EcCc
Q 010240 301 DLFLYAVTDSGMNKKWGRSITDAVKAALE--GGATIIQLREK------DADTRGFLEAAKACLQICCVHGVPLL--INDR 370 (514)
Q Consensus 301 ~~~ly~it~~~~~~~~~~~~~~~~~~~~~--~Gv~~v~lr~~------~~~~~~~~~~~~~~~~~~~~~~~~l~--v~~~ 370 (514)
.+.+..=|..... .++.....+.+-+ .|-+||.|--- -++..+..+.++.+ . +-|..++ .+++
T Consensus 73 ~~~~lpNTag~~t---a~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L---~-~~Gf~Vlpy~~dd 145 (265)
T 1wv2_A 73 RYTILPNTAGCYD---AVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQL---V-KDGFDVMVYTSDD 145 (265)
T ss_dssp TSEEEEECTTCCS---HHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHH---H-TTTCEEEEEECSC
T ss_pred CCEECCcCCCCCC---HHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHH---H-HCCCEEEEEeCCC
Confidence 5666655555433 2455555555545 36789988322 24444444433333 3 3466655 5777
Q ss_pred HHHHH---hCCCCeEEe-C----CCC--CC---HHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccC
Q 010240 371 IDIAL---ACDADGVHL-G----QSD--MP---ARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYP 432 (514)
Q Consensus 371 ~~~a~---~~ga~gvhl-~----~~~--~~---~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~ 432 (514)
+.++. ++|++.|-- + ... .. +..+++......+.....+|++++..|.++|+|-|++|.-.-
T Consensus 146 ~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~ 220 (265)
T 1wv2_A 146 PIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIA 220 (265)
T ss_dssp HHHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred HHHHHHHHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHh
Confidence 77664 668888732 1 111 12 233444445677888889999999999999999999986553
No 299
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=91.75 E-value=9.6 Score=36.59 Aligned_cols=145 Identities=19% Similarity=0.163 Sum_probs=87.0
Q ss_pred hCCCCEEEEEcC-------------CCCHHHHHHHHHHHHHHHhhc-CceEEEcC------------cHHHHHhCCCCeE
Q 010240 329 EGGATIIQLREK-------------DADTRGFLEAAKACLQICCVH-GVPLLIND------------RIDIALACDADGV 382 (514)
Q Consensus 329 ~~Gv~~v~lr~~-------------~~~~~~~~~~~~~~~~~~~~~-~~~l~v~~------------~~~~a~~~ga~gv 382 (514)
+.|++.+.+-.- ..+.++... .++.+++.. +.++++.- .+....+.|+.||
T Consensus 57 ~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~---~~~~I~r~~~~~PviaD~d~Gyg~~~~v~~tv~~l~~aGaagv 133 (318)
T 1zlp_A 57 KTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVE---ATRRITAAAPNLCVVVDGDTGGGGPLNVQRFIRELISAGAKGV 133 (318)
T ss_dssp HTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHH---HHHHHHHHSSSSEEEEECTTCSSSHHHHHHHHHHHHHTTCCEE
T ss_pred HcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHH---HHHHHHhhccCCCEEEeCCCCCCCHHHHHHHHHHHHHcCCcEE
Confidence 467777766431 123344444 444455555 67777631 2334557899999
Q ss_pred EeCCCCC-------------CHHHH-------Hh-hcCCCcEEEEecCC---------HHHHHHhhhCCCcEEEeccccC
Q 010240 383 HLGQSDM-------------PARTA-------RA-LLGPDKIIGVSCKT---------PEEAHQAWIDGANYIGCGGVYP 432 (514)
Q Consensus 383 hl~~~~~-------------~~~~~-------~~-~~~~~~~ig~s~~~---------~~e~~~a~~~g~d~v~~~~vf~ 432 (514)
|+..... +..+. +. ....+..+-.-+.. ++.++...+.|||.|++=.+
T Consensus 134 ~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~ai~Ra~Ay~eAGAd~i~~e~~-- 211 (318)
T 1zlp_A 134 FLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGIRRANLYKEAGADATFVEAP-- 211 (318)
T ss_dssp EEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEECCC--
T ss_pred EECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHHHHHHHHHHHcCCCEEEEcCC--
Confidence 9965431 11111 11 11234444433332 22355666999999976321
Q ss_pred CCCCCCCccCCHHHHHHHHHcCCCCEEE---ECCCC-cccHHHHHHCCCCCCceEEEeeccc
Q 010240 433 TNTKANNLTVGLDGLKTVCLASKLPVVA---IGGIG-ISNASDVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 433 t~~k~~~~~~g~~~l~~~~~~~~~pv~a---~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~ 490 (514)
...+.++++++.+++|+++ .||-+ .-+..++.++|+. -|..+...+
T Consensus 212 ---------~~~e~~~~i~~~l~~P~lan~~~~g~~~~~~~~eL~~lGv~---~v~~~~~~~ 261 (318)
T 1zlp_A 212 ---------ANVDELKEVSAKTKGLRIANMIEGGKTPLHTPEEFKEMGFH---LIAHSLTAV 261 (318)
T ss_dssp ---------CSHHHHHHHHHHSCSEEEEEECTTSSSCCCCHHHHHHHTCC---EEEECSHHH
T ss_pred ---------CCHHHHHHHHHhcCCCEEEEeccCCCCCCCCHHHHHHcCCe---EEEEchHHH
Confidence 2468889999999999853 24544 3468999999999 998888777
No 300
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=91.74 E-value=2.6 Score=39.67 Aligned_cols=106 Identities=17% Similarity=0.109 Sum_probs=71.5
Q ss_pred HHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEE--cCc--HHHHHhCCCCeEEeCCCCCC--------
Q 010240 323 AVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLI--NDR--IDIALACDADGVHLGQSDMP-------- 390 (514)
Q Consensus 323 ~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v--~~~--~~~a~~~ga~gvhl~~~~~~-------- 390 (514)
.+..+...|++.|.|-....+..++.+ +...++.+|..+++ ++. .+.|.++|++.+=++..++.
T Consensus 134 qi~ea~~~GAD~VlLi~a~L~~~~l~~----l~~~a~~lGl~~lvevh~~eEl~~A~~~ga~iIGinnr~l~t~~~dl~~ 209 (272)
T 3tsm_A 134 QVYEARSWGADCILIIMASVDDDLAKE----LEDTAFALGMDALIEVHDEAEMERALKLSSRLLGVNNRNLRSFEVNLAV 209 (272)
T ss_dssp HHHHHHHTTCSEEEEETTTSCHHHHHH----HHHHHHHTTCEEEEEECSHHHHHHHTTSCCSEEEEECBCTTTCCBCTHH
T ss_pred HHHHHHHcCCCEEEEcccccCHHHHHH----HHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCEEEECCCCCccCCCChHH
Confidence 466788999999999888877655444 44556677877664 543 44567889996655543321
Q ss_pred HHHHHhhcCCCc--EEEEecCCHHHHHHhhhCCCcEEEeccccC
Q 010240 391 ARTARALLGPDK--IIGVSCKTPEEAHQAWIDGANYIGCGGVYP 432 (514)
Q Consensus 391 ~~~~~~~~~~~~--~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~ 432 (514)
...+....+.+. +.....+|++++.++.+.|+|-+++|.-+-
T Consensus 210 ~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga~gvLVG~alm 253 (272)
T 3tsm_A 210 SERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLM 253 (272)
T ss_dssp HHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTTCCEEEECHHHH
T ss_pred HHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHc
Confidence 123333443333 333455799999999999999999997664
No 301
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=91.72 E-value=3.4 Score=39.21 Aligned_cols=163 Identities=12% Similarity=0.012 Sum_probs=92.4
Q ss_pred HHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEE--c--C--cHHHHHhCCCCeEEeCCCCCCH--HH
Q 010240 322 DAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLI--N--D--RIDIALACDADGVHLGQSDMPA--RT 393 (514)
Q Consensus 322 ~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v--~--~--~~~~a~~~ga~gvhl~~~~~~~--~~ 393 (514)
+.++.+...|.+++.+-..+... +..+... ....+...+.+++| + + +++.+.+.|+++|-+|.-.-.. ..
T Consensus 51 ~~~e~a~~~GaD~v~lDlEh~~~-~~~~~~~-~l~a~~~~~~~~~VRv~~~d~~di~~~ld~ga~~ImlP~V~saeea~~ 128 (287)
T 2v5j_A 51 YSAELLAGAGFDWLLIDGEHAPN-NVQTVLT-QLQAIAPYPSQPVVRPSWNDPVQIKQLLDVGTQTLLVPMVQNADEARE 128 (287)
T ss_dssp HHHHHHHTSCCSEEEEESSSSSC-CHHHHHH-HHHHHTTSSSEEEEECSSSCHHHHHHHHHTTCCEEEESCCCSHHHHHH
T ss_pred HHHHHHHhCCCCEEEEeCCCccc-hHHHHHH-HHHHHHhcCCCEEEEECCCCHHHHHHHHhCCCCEEEeCCCCCHHHHHH
Confidence 46778889999999997655432 2222222 22233344665655 2 2 3556678899999998865321 11
Q ss_pred HHhhcC------------------------------CCcEEEEecCCHHHHHHhhh----CCCcEEEeccccCCCCCCC-
Q 010240 394 ARALLG------------------------------PDKIIGVSCKTPEEAHQAWI----DGANYIGCGGVYPTNTKAN- 438 (514)
Q Consensus 394 ~~~~~~------------------------------~~~~ig~s~~~~~e~~~a~~----~g~d~v~~~~vf~t~~k~~- 438 (514)
+.+... ....+++-+-|++-+..+.+ -|+|.+++|+-=-+.+-..
T Consensus 129 ~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~av~n~deIaa~~~vD~l~iG~~DLs~~lg~~ 208 (287)
T 2v5j_A 129 AVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAMKNLPQILDVEGVDGVFIGPADLSADMGYA 208 (287)
T ss_dssp HHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHHHHHTHHHHHTSTTEEEEEECHHHHHHHTTST
T ss_pred HHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHHHHHHHHHHhCcCCCCEEEECHHHHHHHhCCC
Confidence 111100 01456766777665443332 3799999987421111110
Q ss_pred CccCCHH---HHHHHH---HcCCCCEEEECCCCcccHHHHHHCCCCCCceEEEeeccc
Q 010240 439 NLTVGLD---GLKTVC---LASKLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 439 ~~~~g~~---~l~~~~---~~~~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~ 490 (514)
..+...+ .++.+. +..++|+....+ +++.+..+++.|++ .+.+++...
T Consensus 209 ~~~~~p~v~~a~~~iv~aaraaG~~~gv~~~-d~~~a~~~~~~G~~---~~s~~~d~~ 262 (287)
T 2v5j_A 209 GNPQHPEVQAAIEQAIVQIRESGKAPGILIA-NEQLAKRYLELGAL---FVAVGVDTT 262 (287)
T ss_dssp TCCCSHHHHHHHHHHHHHHHHTTSEEEEECC-CHHHHHHHHHTTCS---EEEEEEHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHcCCeeEEecC-CHHHHHHHHHhCCC---EEEECcHHH
Confidence 0111222 223332 234788755544 78888899999999 999998643
No 302
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=91.51 E-value=0.97 Score=42.62 Aligned_cols=107 Identities=14% Similarity=0.151 Sum_probs=64.1
Q ss_pred HHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEE--EcC-----cHHHHHhCCCCeEEeC-------
Q 010240 320 ITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLL--IND-----RIDIALACDADGVHLG------- 385 (514)
Q Consensus 320 ~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~--v~~-----~~~~a~~~ga~gvhl~------- 385 (514)
..+.++.+.+.|++.+.+. ++..++ ...+.+.++++|..++ +.. +.+...+.+.+++..-
T Consensus 114 ~~~f~~~~~~aGvdGvIip--Dlp~ee----~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY~vs~~GvTG 187 (271)
T 3nav_A 114 IDDFYQRCQKAGVDSVLIA--DVPTNE----SQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYLLSRAGVTG 187 (271)
T ss_dssp HHHHHHHHHHHTCCEEEET--TSCGGG----CHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEEECCCC----
T ss_pred HHHHHHHHHHCCCCEEEEC--CCCHHH----HHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEEEEeccCCCC
Confidence 4566777777777777663 344433 2344556666766432 221 2333334444555541
Q ss_pred CCC-CC------HHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccC
Q 010240 386 QSD-MP------ARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYP 432 (514)
Q Consensus 386 ~~~-~~------~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~ 432 (514)
... .+ ...+|+.......+|...+|++++.++...|+|-+++|..+-
T Consensus 188 ~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~~~gADgvIVGSAiv 241 (271)
T 3nav_A 188 AETKANMPVHALLERLQQFDAPPALLGFGISEPAQVKQAIEAGAAGAISGSAVV 241 (271)
T ss_dssp ----CCHHHHHHHHHHHHTTCCCEEECSSCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred cccCCchhHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHH
Confidence 111 11 223444445677889999999999988999999999987553
No 303
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=91.37 E-value=0.77 Score=41.76 Aligned_cols=164 Identities=14% Similarity=0.075 Sum_probs=96.3
Q ss_pred CHHHHHHHHHh--CCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHHHHHh
Q 010240 319 SITDAVKAALE--GGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPARTARA 396 (514)
Q Consensus 319 ~~~~~~~~~~~--~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~~~~~ 396 (514)
+..+.+.+.++ .|--.+|+- ..+.++..+.++++.++.. ++-+=|.-..+- ...++.
T Consensus 41 ~~~~~~~ei~~~v~G~Vs~EV~--a~d~e~mi~eA~~L~~~~~--nv~IKIP~T~eG-----------------l~A~~~ 99 (223)
T 3s1x_A 41 KYGDIIREILKIVDGPVSVEVV--STKYEGMVEEARKIHGLGD--NAVVKIPMTEDG-----------------LRAIKT 99 (223)
T ss_dssp CHHHHHHHHHHHCSSCEEEECC--CCSHHHHHHHHHHHHHTCT--TEEEEEESSHHH-----------------HHHHHH
T ss_pred CHHHHHHHHHHhCCCCEEEEEc--cCCHHHHHHHHHHHHHhCC--CEEEEeCCCHHH-----------------HHHHHH
Confidence 44555555443 232234443 4677777777777766542 222223332221 111111
Q ss_pred hcCCCc-EEEEecCCHHHHHHhhhCCCcEEEe--ccccCCCCCCCCccCCHHHHHHHHHcC-----CCCEEEECCCCccc
Q 010240 397 LLGPDK-IIGVSCKTPEEAHQAWIDGANYIGC--GGVYPTNTKANNLTVGLDGLKTVCLAS-----KLPVVAIGGIGISN 468 (514)
Q Consensus 397 ~~~~~~-~ig~s~~~~~e~~~a~~~g~d~v~~--~~vf~t~~k~~~~~~g~~~l~~~~~~~-----~~pv~a~GGi~~~~ 468 (514)
....+. .-..-+.|+.++..|.++|++||.. |-+... ..-|.+.++++.+.+ +..|++.-=-++.+
T Consensus 100 L~~~GI~vn~TlifS~~QA~~Aa~AGa~yISPfvgRi~d~------g~dG~~~v~~i~~~~~~~~~~T~IlaAS~Rn~~~ 173 (223)
T 3s1x_A 100 LSSEHINTNCTLVFNPIQALLAAKAGVTYVSPFVGRLDDI------GEDGMQIIDMIRTIFNNYIIKTQILVASIRNPIH 173 (223)
T ss_dssp HHHTTCCEEEEEECSHHHHHHHHHTTCSEEEEBSHHHHHT------TSCTHHHHHHHHHHHHHTTCCSEEEEBSCCSHHH
T ss_pred HHHCCCcEEEEEeCCHHHHHHHHHcCCeEEEeecchHhhc------CCCHHHHHHHHHHHHHHcCCCCEEEEEeCCCHHH
Confidence 111222 2344568999999999999999922 222221 123677777766532 56677776556788
Q ss_pred HHHHHHCCCCCCceEEEeeccc----CCCCHHHHHHHHHHHHHHHhhh
Q 010240 469 ASDVMKIGVSNLKGVAVVSALF----DRECILPESKKLHAVLMDAVQR 512 (514)
Q Consensus 469 ~~~~~~~Ga~~~~gva~~~~i~----~~~~~~~~~~~~~~~~~~~~~~ 512 (514)
+.++..+|++ .+-+.-.++ +.+-..+.+++|.+.|++...+
T Consensus 174 v~~aa~~G~d---~~Tip~~vl~~l~~hpltd~~~~~F~~Dw~~~~~~ 218 (223)
T 3s1x_A 174 VLRSAVIGAD---VVTVPFNVLKSLMKHPKTDEGLAKFLEDWKKVSPD 218 (223)
T ss_dssp HHHHHHHTCS---EEEECHHHHHHTTCCHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHcCCC---EEEeCHHHHHHHHcCCcHHHHHHHHHHHHHHhhCc
Confidence 8888899999 888776666 2333367888999999886543
No 304
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=91.21 E-value=2.8 Score=38.85 Aligned_cols=105 Identities=21% Similarity=0.183 Sum_probs=73.6
Q ss_pred HHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEE--EcCc--HHHHHhCCCCeEEeCCCCCC--------H
Q 010240 324 VKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLL--INDR--IDIALACDADGVHLGQSDMP--------A 391 (514)
Q Consensus 324 ~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~--v~~~--~~~a~~~ga~gvhl~~~~~~--------~ 391 (514)
+.++...|+++|.|-..-+++.++.+ +..++...|..++ +++. .+.|.++|++-+=+.+.++. .
T Consensus 119 I~eAr~~GADaILLI~a~L~~~~l~~----l~~~A~~lGl~~LvEVh~~~El~rAl~~~a~iIGINNRnL~tf~vdl~~t 194 (258)
T 4a29_A 119 IDDAYNLGADTVLLIVKILTERELES----LLEYARSYGMEPLILINDENDLDIALRIGARFIGIMSRDFETGEINKENQ 194 (258)
T ss_dssp HHHHHHHTCSEEEEEGGGSCHHHHHH----HHHHHHHTTCCCEEEESSHHHHHHHHHTTCSEEEECSBCTTTCCBCHHHH
T ss_pred HHHHHHcCCCeeehHHhhcCHHHHHH----HHHHHHHHhHHHHHhcchHHHHHHHhcCCCcEEEEeCCCccccccCHHHH
Confidence 55566789999999888888776554 4456667776554 4553 55678899997777666543 2
Q ss_pred HHHHhhcCCCcEEE--EecCCHHHHHHhhhCCCcEEEeccccC
Q 010240 392 RTARALLGPDKIIG--VSCKTPEEAHQAWIDGANYIGCGGVYP 432 (514)
Q Consensus 392 ~~~~~~~~~~~~ig--~s~~~~~e~~~a~~~g~d~v~~~~vf~ 432 (514)
..+....+.+.++- ...+|++++....+.|+|-+++|--|-
T Consensus 195 ~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGealm 237 (258)
T 4a29_A 195 RKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFLISSSLM 237 (258)
T ss_dssp HHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCCEEEECHHHH
T ss_pred HHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEEEECHHHh
Confidence 23444455555433 245799999999999999999997664
No 305
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=91.18 E-value=0.22 Score=52.40 Aligned_cols=79 Identities=20% Similarity=0.169 Sum_probs=54.6
Q ss_pred CHHH-HHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCc------------ccHHHHHHCC
Q 010240 410 TPEE-AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGI------------SNASDVMKIG 476 (514)
Q Consensus 410 ~~~e-~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~------------~~~~~~~~~G 476 (514)
++.+ ++...+.|+|.+.+--+-.+...+......++.++++++...+|+..-|||.. +++..++++|
T Consensus 281 dp~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aG 360 (555)
T 1jvn_A 281 KPVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSG 360 (555)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHHcC
Confidence 5655 45555789999955332222111111122467888888878999999999974 3499999999
Q ss_pred CCCCceEEEeecccC
Q 010240 477 VSNLKGVAVVSALFD 491 (514)
Q Consensus 477 a~~~~gva~~~~i~~ 491 (514)
|+ .|.+++....
T Consensus 361 ad---~V~igt~~~~ 372 (555)
T 1jvn_A 361 AD---KVSIGTDAVY 372 (555)
T ss_dssp CS---EEEECHHHHH
T ss_pred CC---EEEECCHHhh
Confidence 99 9999998753
No 306
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=91.13 E-value=6.3 Score=38.68 Aligned_cols=167 Identities=16% Similarity=0.116 Sum_probs=109.1
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCC--CCHHHHHHHHHHHHHHHhhcCceEEEc-------------CcHHHHHhCCCCeE
Q 010240 318 RSITDAVKAALEGGATIIQLREKD--ADTRGFLEAAKACLQICCVHGVPLLIN-------------DRIDIALACDADGV 382 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~--~~~~~~~~~~~~~~~~~~~~~~~l~v~-------------~~~~~a~~~ga~gv 382 (514)
++..+.++.+.+.|.+.|---.-. -+..++.+..+++...|++.|..+++. +++....++|++|+
T Consensus 17 ~~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIsp~~l~~Lg~s~~dl~~~~~lGi~gl 96 (372)
T 2p0o_A 17 NDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDISGEALKRAGFSFDELEPLIELGVTGL 96 (372)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHHTCEEEEEECHHHHHTTTCBTTBCHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHHHHHHHHcCCCEE
Confidence 455688999999997655433332 234456677788888999999999873 34566677788899
Q ss_pred EeCCCCCCHHHHHhhcCCCcEEEEecC--CHHHHHHhhhCCCc---EEEeccccCCCCCCCCccCCHHHHHHHHHc---C
Q 010240 383 HLGQSDMPARTARALLGPDKIIGVSCK--TPEEAHQAWIDGAN---YIGCGGVYPTNTKANNLTVGLDGLKTVCLA---S 454 (514)
Q Consensus 383 hl~~~~~~~~~~~~~~~~~~~ig~s~~--~~~e~~~a~~~g~d---~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~---~ 454 (514)
=+..+-.....+.-. .+..|...+. +.+++....+.|+| +....-+||-+ .++++.+.+.+-.+. .
T Consensus 97 RLD~Gf~~~eia~ls--~nlkIeLNASti~~~~l~~l~~~~~n~~~l~a~HNFYPr~----~TGLs~~~f~~~n~~~k~~ 170 (372)
T 2p0o_A 97 RMDYGITIEQMAHAS--HKIDIGLNASTITLEEVAELKAHQADFSRLEAWHNYYPRP----ETGIGTTFFNEKNRWLKEL 170 (372)
T ss_dssp EECSSCCHHHHHHHH--TTSEEEEETTTCCHHHHHHHHHTTCCGGGEEEECCCCCST----TCSBCHHHHHHHHHHHHHT
T ss_pred EEcCCCCHHHHHHHh--cCCEEEEECccCCHHHHHHHHHcCCChHHeEEeeccCCCC----CCCCCHHHHHHHHHHHHHC
Confidence 886654333333322 2366666554 57888888899998 78888888832 456778877665443 4
Q ss_pred CCCEEEE--C----------C-CCcc---------cHHHHHHC-CCCCCceEEEeecccCCC
Q 010240 455 KLPVVAI--G----------G-IGIS---------NASDVMKI-GVSNLKGVAVVSALFDRE 493 (514)
Q Consensus 455 ~~pv~a~--G----------G-i~~~---------~~~~~~~~-Ga~~~~gva~~~~i~~~~ 493 (514)
++++.|- | | .|.| -+..++.. +.+ .|-+|.+..+.+
T Consensus 171 Gi~t~AFI~g~~~~rGPl~eGLPTLE~HR~~~~~~~a~~L~~~~~iD---~V~IGd~~~S~~ 229 (372)
T 2p0o_A 171 GLQVFTFVPGDGQTRGPIFAGLPTLEKHRGQNPFAAAVGLMADPYVD---AVYIGDPTISER 229 (372)
T ss_dssp TCEEEEEECCSSSCCTTTCSCCCSBGGGTTSCHHHHHHHHHHSTTCC---EEEECSSCCCHH
T ss_pred CCcEEEEecCCCccCCCccCCCCchHHhCCCCHHHHHHHHHhcCCCC---EEEECCCCCCHH
Confidence 6776653 2 1 1322 24567777 467 999988776533
No 307
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=90.89 E-value=1.9 Score=39.03 Aligned_cols=74 Identities=16% Similarity=0.225 Sum_probs=52.1
Q ss_pred HHhhcCCCcEEEEec-CCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCcccHHHH
Q 010240 394 ARALLGPDKIIGVSC-KTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGISNASDV 472 (514)
Q Consensus 394 ~~~~~~~~~~ig~s~-~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~~~~~~~ 472 (514)
+++.+ ++..+|+.+ .+.+++..|.+.|||++..+. + ..+. .+.+...++|++. |=-|++.+...
T Consensus 61 l~~~~-~~~~vgagtvi~~d~~~~A~~aGAd~v~~p~-~-----------d~~v-~~~~~~~g~~~i~-G~~t~~e~~~A 125 (214)
T 1wbh_A 61 IAKEV-PEAIVGAGTVLNPQQLAEVTEAGAQFAISPG-L-----------TEPL-LKAATEGTIPLIP-GISTVSELMLG 125 (214)
T ss_dssp HHHHC-TTSEEEEESCCSHHHHHHHHHHTCSCEEESS-C-----------CHHH-HHHHHHSSSCEEE-EESSHHHHHHH
T ss_pred HHHHC-cCCEEeeCEEEEHHHHHHHHHcCCCEEEcCC-C-----------CHHH-HHHHHHhCCCEEE-ecCCHHHHHHH
Confidence 44444 367777644 578999999999999995432 1 2333 3344456788876 54468889999
Q ss_pred HHCCCCCCceEEE
Q 010240 473 MKIGVSNLKGVAV 485 (514)
Q Consensus 473 ~~~Ga~~~~gva~ 485 (514)
.+.|++ .+.+
T Consensus 126 ~~~Gad---~v~~ 135 (214)
T 1wbh_A 126 MDYGLK---EFKF 135 (214)
T ss_dssp HHTTCC---EEEE
T ss_pred HHCCCC---EEEE
Confidence 999999 8877
No 308
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=90.86 E-value=11 Score=35.91 Aligned_cols=130 Identities=17% Similarity=0.087 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHhhcCceEEEcC------------cHHHHHhCCCCeEEeCCCC---------------CCHHH-HHh---
Q 010240 348 LEAAKACLQICCVHGVPLLIND------------RIDIALACDADGVHLGQSD---------------MPART-ARA--- 396 (514)
Q Consensus 348 ~~~~~~~~~~~~~~~~~l~v~~------------~~~~a~~~ga~gvhl~~~~---------------~~~~~-~~~--- 396 (514)
.+.+..++.+++..+.++++.- .+....+.|+.|||+.... .+..+ +.+
T Consensus 65 ~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~A 144 (295)
T 1s2w_A 65 TQVVEVLEFMSDASDVPILLDADTGYGNFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKA 144 (295)
T ss_dssp HHHHHHHHHHHHTCSSCEEEECCSSCSSHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCEEecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHH
Confidence 3444555566666677866531 1334457899999996543 11111 111
Q ss_pred ---h-cCCC-cEEEEecCC-----HHH----HHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCC--CCEEE
Q 010240 397 ---L-LGPD-KIIGVSCKT-----PEE----AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASK--LPVVA 460 (514)
Q Consensus 397 ---~-~~~~-~~ig~s~~~-----~~e----~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~--~pv~a 460 (514)
. ...+ .+++.+-.. .++ ++...++|||.|++=+.- ...+.++++++.++ +|+++
T Consensus 145 a~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~----------~~~~~~~~i~~~~~~~~P~i~ 214 (295)
T 1s2w_A 145 CKDSQTDPDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSKK----------ADPSDIEAFMKAWNNQGPVVI 214 (295)
T ss_dssp HHHHCSSTTCEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCS----------SSSHHHHHHHHHHTTCSCEEE
T ss_pred HHHhcccCCcEEEEeehHHhccccHHHHHHHHHHHHHcCCCEEEEcCCC----------CCHHHHHHHHHHcCCCCCEEE
Confidence 1 1233 344443221 244 556679999999763211 13566778887776 99987
Q ss_pred ECCC-CcccHHHHHHCCCCCCceEEEeeccc
Q 010240 461 IGGI-GISNASDVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 461 ~GGi-~~~~~~~~~~~Ga~~~~gva~~~~i~ 490 (514)
.-+- ..-...++.++|+. -|..+...+
T Consensus 215 ~~~~~~~~~~~eL~~lGv~---~v~~~~~~~ 242 (295)
T 1s2w_A 215 VPTKYYKTPTDHFRDMGVS---MVIWANHNL 242 (295)
T ss_dssp CCSTTTTSCHHHHHHHTCC---EEEECSHHH
T ss_pred eCCCCCCCCHHHHHHcCCc---EEEEChHHH
Confidence 6331 12348899999999 998888776
No 309
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=90.80 E-value=0.34 Score=44.60 Aligned_cols=108 Identities=17% Similarity=0.064 Sum_probs=65.5
Q ss_pred HHHHHHHHhCCCCEEEEEcCC-CCHHHHHHHHHHHHHHHhhcCceEEEcC----cHHHHHhCCCCeEEeCC---------
Q 010240 321 TDAVKAALEGGATIIQLREKD-ADTRGFLEAAKACLQICCVHGVPLLIND----RIDIALACDADGVHLGQ--------- 386 (514)
Q Consensus 321 ~~~~~~~~~~Gv~~v~lr~~~-~~~~~~~~~~~~~~~~~~~~~~~l~v~~----~~~~a~~~ga~gvhl~~--------- 386 (514)
.+.++++++.|++.|.+-... .++..+.++.+ .+++.|..+++.- ..+.+.+.|+|.+-++.
T Consensus 91 ~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~----~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~ 166 (229)
T 3q58_A 91 LQDVDALAQAGADIIAFDASFRSRPVDIDSLLT----RIRLHGLLAMADCSTVNEGISCHQKGIEFIGTTLSGYTGPITP 166 (229)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHH----HHHHTTCEEEEECSSHHHHHHHHHTTCSEEECTTTTSSSSCCC
T ss_pred HHHHHHHHHcCCCEEEECccccCChHHHHHHHH----HHHHCCCEEEEecCCHHHHHHHHhCCCCEEEecCccCCCCCcC
Confidence 345778899999999875432 12333333333 3344577776632 24456788999883211
Q ss_pred CCCCHHHHHhhc--CCCcEEEEecCCHHHHHHhhhCCCcEEEeccccC
Q 010240 387 SDMPARTARALL--GPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYP 432 (514)
Q Consensus 387 ~~~~~~~~~~~~--~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~ 432 (514)
........++.. ....+..-..+|++++.++.+.|+|-+.+|..+-
T Consensus 167 ~~~~~~li~~l~~~~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsai~ 214 (229)
T 3q58_A 167 VEPDLAMVTQLSHAGCRVIAEGRYNTPALAANAIEHGAWAVTVGSAIT 214 (229)
T ss_dssp SSCCHHHHHHHHTTTCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred CCCCHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHcCCCEEEEchHhc
Confidence 112223333332 2333333445799999999999999999997664
No 310
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=90.44 E-value=0.38 Score=47.53 Aligned_cols=81 Identities=10% Similarity=-0.013 Sum_probs=54.8
Q ss_pred HHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCcccHHHHHHCC-CCCCceEEEeecccCC
Q 010240 414 AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGISNASDVMKIG-VSNLKGVAVVSALFDR 492 (514)
Q Consensus 414 ~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~~~~~~~~~~G-a~~~~gva~~~~i~~~ 492 (514)
+....+.|.||+.++.-......+.. ......+++++....||++-|+.+++.+.++++.| +| .|++++.+...
T Consensus 247 ~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~a~~ik~~~~~~v~~~g~~~~~~ae~~l~~G~aD---~V~~gR~~lad 321 (358)
T 4a3u_A 247 AKMLSDLDIAFLGMREGAVDGTFGKT--DQPKLSPEIRKVFKPPLVLNQDYTFETAQAALDSGVAD---AISFGRPFIGN 321 (358)
T ss_dssp HHHHHHHTCSEEEEECCBTTCSSSBC--SSCCCHHHHHHHCCSCEEEESSCCHHHHHHHHHHTSCS---EEEESHHHHHC
T ss_pred HHhhhccCccccccccccccCccccc--ccHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCce---EeHhhHHHHhC
Confidence 34455678999977532221111111 11233455666677888887877899999999998 78 99999999988
Q ss_pred CCHHHHH
Q 010240 493 ECILPES 499 (514)
Q Consensus 493 ~~~~~~~ 499 (514)
+|....+
T Consensus 322 Pdlp~k~ 328 (358)
T 4a3u_A 322 PDLPRRF 328 (358)
T ss_dssp TTHHHHH
T ss_pred hhHHHHH
Confidence 7765544
No 311
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=90.40 E-value=4.1 Score=40.19 Aligned_cols=157 Identities=15% Similarity=0.201 Sum_probs=101.3
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCH------HHH--------------------HHHHHHHHHHHhhcCceEEEc---
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADT------RGF--------------------LEAAKACLQICCVHGVPLLIN--- 368 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~------~~~--------------------~~~~~~~~~~~~~~~~~l~v~--- 368 (514)
+...+.++++.++|+++|-.....+.. .++ .+..+.+.+.|++.|+.++-.
T Consensus 44 e~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~Gi~~~stpfD 123 (385)
T 1vli_A 44 DQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIFLSTVCD 123 (385)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEECBCCS
T ss_pred HHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHcCCcEEEccCC
Confidence 557888889999999998873221111 001 133567888999999988742
Q ss_pred -CcHHHHHhCCCCeEEeCCCCCC-HHHHHhh--cCCCcEEEEecCCHHHHHHhh----hCCC-cEEEec--cccCCCCCC
Q 010240 369 -DRIDIALACDADGVHLGQSDMP-ARTARAL--LGPDKIIGVSCKTPEEAHQAW----IDGA-NYIGCG--GVYPTNTKA 437 (514)
Q Consensus 369 -~~~~~a~~~ga~gvhl~~~~~~-~~~~~~~--~~~~~~ig~s~~~~~e~~~a~----~~g~-d~v~~~--~vf~t~~k~ 437 (514)
..++...+++++.+-+++.++. ...+++. .+.+.++...-.|.+|+..|. +.|. +++++. .-||| |
T Consensus 124 ~~svd~l~~~~vd~~KIgS~~~~N~pLL~~va~~gKPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPt---p 200 (385)
T 1vli_A 124 EGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPA---P 200 (385)
T ss_dssp HHHHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSC---C
T ss_pred HHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHCCCCcEEEEeccCCCCC---C
Confidence 2567777889999999987653 2333333 344555555555999977665 4676 777652 22343 1
Q ss_pred CCccCCHHHHHHHHHcC-CCCEEEECCCC--cccHHHHHHCCCC
Q 010240 438 NNLTVGLDGLKTVCLAS-KLPVVAIGGIG--ISNASDVMKIGVS 478 (514)
Q Consensus 438 ~~~~~g~~~l~~~~~~~-~~pv~a~GGi~--~~~~~~~~~~Ga~ 478 (514)
...+.+..+..+++.+ ++||.-.+--. ..-......+||+
T Consensus 201 -~~~~nL~aI~~Lk~~f~~lpVG~SdHt~G~~~~~~AAvAlGA~ 243 (385)
T 1vli_A 201 -PEYSNLSVIPMLAAAFPEAVIGFSDHSEHPTEAPCAAVRLGAK 243 (385)
T ss_dssp -GGGCCTTHHHHHHHHSTTSEEEEEECCSSSSHHHHHHHHTTCS
T ss_pred -hhhcCHHHHHHHHHHcCCCCEEeCCCCCCchHHHHHHHHcCCC
Confidence 3457888899999988 89984443332 2223456678888
No 312
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=90.38 E-value=0.22 Score=57.34 Aligned_cols=78 Identities=15% Similarity=0.089 Sum_probs=55.1
Q ss_pred CHHHHHHhhhCCCcEEEecccc-CCCCCCCC----ccCCH-HHHHHHHHcC-------CCCEEEECCCC-cccHHHHHHC
Q 010240 410 TPEEAHQAWIDGANYIGCGGVY-PTNTKANN----LTVGL-DGLKTVCLAS-------KLPVVAIGGIG-ISNASDVMKI 475 (514)
Q Consensus 410 ~~~e~~~a~~~g~d~v~~~~vf-~t~~k~~~----~~~g~-~~l~~~~~~~-------~~pv~a~GGi~-~~~~~~~~~~ 475 (514)
..+++..+.+.|+|+|.++-.- -|...+.. ....+ ..+.++.+.+ ++||+|.|||. ..++..++.+
T Consensus 1006 i~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~aL~ev~~al~~~glr~~VpVIAdGGIrtG~DVakALaL 1085 (1479)
T 1ea0_A 1006 IGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEMGLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAML 1085 (1479)
T ss_dssp HHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHHHHHHHHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHT
T ss_pred hHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHHHHHHHHHHHHHHcCCCCCceEEEECCCCCHHHHHHHHHc
Confidence 4678888999999999984432 12111110 11222 4555555432 69999999996 7899999999
Q ss_pred CCCCCceEEEeeccc
Q 010240 476 GVSNLKGVAVVSALF 490 (514)
Q Consensus 476 Ga~~~~gva~~~~i~ 490 (514)
||+ +|.++++++
T Consensus 1086 GAd---aV~iGTafL 1097 (1479)
T 1ea0_A 1086 GAE---EFGIGTASL 1097 (1479)
T ss_dssp TCS---EEECCHHHH
T ss_pred CCC---eeeEcHHHH
Confidence 999 999999985
No 313
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=90.32 E-value=5.7 Score=38.78 Aligned_cols=138 Identities=17% Similarity=0.172 Sum_probs=92.1
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCC-CCCCHHHHHhhcCCCcEEEEec
Q 010240 330 GGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQ-SDMPARTARALLGPDKIIGVSC 408 (514)
Q Consensus 330 ~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~-~~~~~~~~~~~~~~~~~ig~s~ 408 (514)
.|.+.+.+--...+.++-++..+++.+.|+.+|+.|-.. +|. ++. .+..... ....... -
T Consensus 136 ~gFtSVMiDgS~~p~eENI~~Tkevv~~ah~~gvsVEaE--------LG~----vGG~EDgv~~~---~~~~~~~----y 196 (358)
T 1dos_A 136 PLFSSHMIDLSEESLQENIEICSKYLERMSKIGMTLEIE--------LGC----TGGEEDGVDNS---HMDASAL----Y 196 (358)
T ss_dssp CSCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEE--------CCC----CCCCCCCCSCC---CCCCCCC----S
T ss_pred CCCceEeecCCCCCHHHHHHHHHHHHHHHHHcCCEEEEE--------ecc----ccCcCCCcccc---ccccccc----c
Confidence 458999998888899998999999999999998877541 121 111 1110000 0000111 3
Q ss_pred CCHHHHHHhhhC--CCc---EEEe--ccccCCCCCCCCccCCHHHHHHHHHc---------CCCCEEEECC--CCcccHH
Q 010240 409 KTPEEAHQAWID--GAN---YIGC--GGVYPTNTKANNLTVGLDGLKTVCLA---------SKLPVVAIGG--IGISNAS 470 (514)
Q Consensus 409 ~~~~e~~~a~~~--g~d---~v~~--~~vf~t~~k~~~~~~g~~~l~~~~~~---------~~~pv~a~GG--i~~~~~~ 470 (514)
.+|+|+.+..+. |+| .+.+ |.+.-. .||+.+.+.++.|+++.+. .++|++-=|| +..+++.
T Consensus 197 T~Peea~~fv~~ttgvd~~d~LAvaiGt~HG~-Yk~g~p~L~~~~L~~i~~~i~~~~g~~~~~vpLVlHGgSG~~~e~i~ 275 (358)
T 1dos_A 197 TQPEDVDYAYTELSKISPRFTIAASFGNVHGV-YKAGNVVLTPTILRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIK 275 (358)
T ss_dssp CCHHHHHHHHHHHHTTCSCEEEECCSSCCCSS-CCCSCCCCCTHHHHHHHHHHHHHHTCCTTCSCEEECSCTTCCHHHHH
T ss_pred CCHHHHHHHHHHhcCCChhceEEEecccccCc-cCCCCCCcCHHHHHHHHHHHHHHhCCCCCCCcEEEeCCCCCCHHHHH
Confidence 589999888765 788 6544 333321 2234455788999988764 5799999994 5678999
Q ss_pred HHHHCCCCCCceEEEeeccc
Q 010240 471 DVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 471 ~~~~~Ga~~~~gva~~~~i~ 490 (514)
++.+.|.. -|=+.+.+.
T Consensus 276 ~ai~~GV~---KiNi~Tdl~ 292 (358)
T 1dos_A 276 DSVSYGVV---KMNIDTDTQ 292 (358)
T ss_dssp HHHHTTEE---EEEECHHHH
T ss_pred HHHHCCCe---EEEEcHHHH
Confidence 99999988 887777653
No 314
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=90.19 E-value=6.6 Score=36.64 Aligned_cols=162 Identities=13% Similarity=0.041 Sum_probs=91.8
Q ss_pred HHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEE--c--C--cHHHHHhCCCCeEEeCCCCCCH--HHH
Q 010240 323 AVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLI--N--D--RIDIALACDADGVHLGQSDMPA--RTA 394 (514)
Q Consensus 323 ~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v--~--~--~~~~a~~~ga~gvhl~~~~~~~--~~~ 394 (514)
.++.+...|.++|.+-.-+..... .+....+. .+...+...+| | + +++.+...|++||.+|.-.-.. ..+
T Consensus 29 ~~e~a~~~g~D~vilDlEhav~~~-~k~~~~l~-a~~~~~~~~~VRVn~~~~~di~~~ld~G~~gI~lP~v~saed~~~~ 106 (261)
T 3qz6_A 29 IVRIYAEAGLDYFIVDCEHAAYTF-REINHLVS-VAKNAGVSVLVRIPQVDRAHVQRLLDIGAEGFMIPGVQSAETMRET 106 (261)
T ss_dssp HHHHHHHTTCSEEEEESSSSCCCH-HHHHHHHH-HHHHHTCEEEEECSSCCHHHHHHHHHHTCCEEEETTCCSHHHHHHH
T ss_pred HHHHHhcCCcCEEEEeccCCCCCH-HHHHHHHH-HHhhcCCeEEEEeCCCCHHHHHHHHhcCCCEEEECCcCCHHHHHHH
Confidence 567788889999999776554332 12222222 22334565554 3 2 3556678899999999865421 111
Q ss_pred Hhhc------------------------------CCCcEEEEecCCHHHHHHhhh----CCCcEEEeccccCCCCCCC-C
Q 010240 395 RALL------------------------------GPDKIIGVSCKTPEEAHQAWI----DGANYIGCGGVYPTNTKAN-N 439 (514)
Q Consensus 395 ~~~~------------------------------~~~~~ig~s~~~~~e~~~a~~----~g~d~v~~~~vf~t~~k~~-~ 439 (514)
.+.. .....+++-+-|++-+..+.+ .|+|.+++|+-=-+.+-.. .
T Consensus 107 ~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~av~~~~eIaa~~~vd~l~iG~~DL~~~lg~~~ 186 (261)
T 3qz6_A 107 VRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAVEDIDSILAVQGVDAVIFGPRDLSNDLGIIG 186 (261)
T ss_dssp HHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHHHHTHHHHHTSTTCCEEEECHHHHHHHTTCTT
T ss_pred HHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEEEEECCHHHHHHHHHHhCCCCCCEEEECHHHHHHHhCCCC
Confidence 1111 013467776777665444332 4799999976422111100 0
Q ss_pred ccCCHH---HHHHHH---HcCCCCEEEECCCCcccH-HHHHHCCCCCCceEEEeeccc
Q 010240 440 LTVGLD---GLKTVC---LASKLPVVAIGGIGISNA-SDVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 440 ~~~g~~---~l~~~~---~~~~~pv~a~GGi~~~~~-~~~~~~Ga~~~~gva~~~~i~ 490 (514)
.+...+ .++.+. ...++|+-..++ +++.+ ..+++.|++ .+.++....
T Consensus 187 ~~~~p~v~~a~~~iv~aa~aaG~~~g~~~~-~~~~~~~~~~~~G~~---~~s~~~D~~ 240 (261)
T 3qz6_A 187 QTEHPKVYECYEKVYRAADRQGVVKGFFTA-ADAAKMGWAVERGAQ---MLLWSGDVA 240 (261)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHTCEEEEEES-SCGGGGHHHHHTTCC---EEEEEEHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCCEEEEeC-CHHHHHHHHHHCCCC---EEEEhhHHH
Confidence 111222 222222 223777655544 78888 889999999 999998543
No 315
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=90.18 E-value=0.74 Score=41.50 Aligned_cols=103 Identities=12% Similarity=0.199 Sum_probs=63.7
Q ss_pred HHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEc----Cc----HHHHHhCCCCeEEeCCC-------
Q 010240 323 AVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLIN----DR----IDIALACDADGVHLGQS------- 387 (514)
Q Consensus 323 ~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~----~~----~~~a~~~ga~gvhl~~~------- 387 (514)
.++.+.+.|++.+.+-.-. ..+. ...+.+.++++|.++++. .. .+.+.+.|+|++++...
T Consensus 69 ~~~~~~~~Gad~v~v~~~~-~~~~----~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g~~g~~~~ 143 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGVT-DVLT----IQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQAAG 143 (211)
T ss_dssp HHHHHHHTTCSEEEEETTS-CHHH----HHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHHTCCEEEEECCHHHHHTT
T ss_pred HHHHHHhcCCCEEEEeCCC-ChhH----HHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHcCCCEEEEcCCCcccccC
Confidence 4889999999999985433 2222 234445566778877642 22 45677889998876321
Q ss_pred CCCHH---HHHhhc-CCCcEEEEecCCHHHHHHhhhCCCcEEEecccc
Q 010240 388 DMPAR---TARALL-GPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVY 431 (514)
Q Consensus 388 ~~~~~---~~~~~~-~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf 431 (514)
..... .+++.. .....++... +++.+.++.+.|+|++.+|..+
T Consensus 144 ~~~~~~i~~l~~~~~~~~i~~~gGI-~~~~~~~~~~~Gad~vvvGsai 190 (211)
T 3f4w_A 144 RKPIDDLITMLKVRRKARIAVAGGI-SSQTVKDYALLGPDVVIVGSAI 190 (211)
T ss_dssp CCSHHHHHHHHHHCSSCEEEEESSC-CTTTHHHHHTTCCSEEEECHHH
T ss_pred CCCHHHHHHHHHHcCCCcEEEECCC-CHHHHHHHHHcCCCEEEECHHH
Confidence 01222 334433 2223333334 5778888889999999998544
No 316
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=90.08 E-value=1.4 Score=41.04 Aligned_cols=78 Identities=22% Similarity=0.155 Sum_probs=57.8
Q ss_pred CCHHH-HHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCc-ccHHHHHHCCCCCCceEEEe
Q 010240 409 KTPEE-AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGI-SNASDVMKIGVSNLKGVAVV 486 (514)
Q Consensus 409 ~~~~e-~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~-~~~~~~~~~Ga~~~~gva~~ 486 (514)
.++.+ ++.+.+.||+.+-+ .. -+..-....+.++.+++.+++||..=++|.. ..+.+++.+||+ +|.++
T Consensus 65 ~~p~~~A~~~~~~GA~~isv---lt---~~~~f~G~~~~l~~i~~~v~lPvl~kdfI~d~~qi~~a~~~GAD---~VlL~ 135 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSV---LT---EPHRFGGSLLDLKRVREAVDLPLLRKDFVVDPFMLEEARAFGAS---AALLI 135 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEE---EC---CCSSSCCCHHHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCS---EEEEE
T ss_pred CCHHHHHHHHHHcCCCEEEE---ec---chhhhccCHHHHHHHHHhcCCCEEECCcCCCHHHHHHHHHcCCC---EEEEC
Confidence 45555 55666888999944 21 1222223678999999989999999888864 489999999999 99999
Q ss_pred ecccCCCCHH
Q 010240 487 SALFDRECIL 496 (514)
Q Consensus 487 ~~i~~~~~~~ 496 (514)
..... ++..
T Consensus 136 ~~~l~-~~l~ 144 (254)
T 1vc4_A 136 VALLG-ELTG 144 (254)
T ss_dssp HHHHG-GGHH
T ss_pred ccchH-HHHH
Confidence 98876 4433
No 317
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=90.00 E-value=7.8 Score=36.90 Aligned_cols=143 Identities=13% Similarity=0.147 Sum_probs=83.7
Q ss_pred CHHHHHHHHHhCCCCEEEEEcCCC-------------CHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeC
Q 010240 319 SITDAVKAALEGGATIIQLREKDA-------------DTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLG 385 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr~~~~-------------~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~ 385 (514)
+..+.+..+.+.|+..|+|-+... +.+++.+.++..+......+..++|+-+.|.....|
T Consensus 96 ~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~g------- 168 (302)
T 3fa4_A 96 MVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHG------- 168 (302)
T ss_dssp HHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHC-------
T ss_pred HHHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCC-------
Confidence 456778888899999999966532 334444444433333322344555554433211000
Q ss_pred CCCCCHHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEE--E-
Q 010240 386 QSDMPARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVA--I- 461 (514)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a--~- 461 (514)
..+ .++-++...+.|||.|++-. ....+.++++++.+ ++|+++ +
T Consensus 169 -----lde----------------Ai~Ra~ay~eAGAD~ifi~g-----------~~~~~ei~~~~~~~~~~Pl~~n~~~ 216 (302)
T 3fa4_A 169 -----YEE----------------SVARLRAARDAGADVGFLEG-----------ITSREMARQVIQDLAGWPLLLNMVE 216 (302)
T ss_dssp -----HHH----------------HHHHHHHHHTTTCSEEEETT-----------CCCHHHHHHHHHHTTTSCEEEECCT
T ss_pred -----HHH----------------HHHHHHHHHHcCCCEEeecC-----------CCCHHHHHHHHHHhcCCceeEEEec
Confidence 000 12235556689999996521 12477888998887 588866 2
Q ss_pred CCCCc-ccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHH
Q 010240 462 GGIGI-SNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMD 508 (514)
Q Consensus 462 GGi~~-~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~ 508 (514)
||-++ -+..++.++|+. -|.....++ ..+...+++...+
T Consensus 217 ~g~~p~~~~~eL~~lGv~---~v~~~~~~~-----raa~~A~~~~~~~ 256 (302)
T 3fa4_A 217 HGATPSISAAEAKEMGFR---IIIFPFAAL-----GPAVAAMREAMEK 256 (302)
T ss_dssp TSSSCCCCHHHHHHHTCS---EEEETTTTH-----HHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHcCCC---EEEEchHHH-----HHHHHHHHHHHHH
Confidence 45554 468899999999 887776665 3444444444443
No 318
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=89.92 E-value=1.6 Score=40.25 Aligned_cols=111 Identities=13% Similarity=0.044 Sum_probs=62.2
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCC---HHHHHHHHHHHHHHHhhcCceEEEcC---------------c---HHHHHh
Q 010240 318 RSITDAVKAALEGGATIIQLREKDAD---TRGFLEAAKACLQICCVHGVPLLIND---------------R---IDIALA 376 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~---~~~~~~~~~~~~~~~~~~~~~l~v~~---------------~---~~~a~~ 376 (514)
++..+.++.+.+.|+++|++|..... .++..+.+..++..+ .+.++++.- + ++.+.+
T Consensus 17 ~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~v~~~~~~lr~~~--~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~ 94 (238)
T 1sfl_A 17 EETLIQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKVMQ--DSFKLLVTYRTKLQGGYGQFTNDSYLNLISDLAN 94 (238)
T ss_dssp -CHHHHHHHHTTTTCSEEEEECTTSTTCCHHHHHHHHHHHC-----CCSEEEEECCBGGGTSCBCCCHHHHHHHHHHGGG
T ss_pred HHHHHHHHHhhhcCCCEEEEEecccccCCHHHHHHHHHHHHHhc--cCCCEEEEeeccccCCCCCCCHHHHHHHHHHHHH
Confidence 56777788888889999999997654 333333333333222 146776521 1 234455
Q ss_pred C-CCCeEEeCCCCC-CHH----HHHhhcCCCcEEEEecC----CH--HH----HHHhhhCCCcEEEeccccCC
Q 010240 377 C-DADGVHLGQSDM-PAR----TARALLGPDKIIGVSCK----TP--EE----AHQAWIDGANYIGCGGVYPT 433 (514)
Q Consensus 377 ~-ga~gvhl~~~~~-~~~----~~~~~~~~~~~ig~s~~----~~--~e----~~~a~~~g~d~v~~~~vf~t 433 (514)
. +++.|-+.-... +.. ..+.....+..+..|.| |+ +| ..++.+.|||++ ++--+
T Consensus 95 ~~~~d~iDvEl~~~~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp~~~el~~~~~~~~~~gaDiv---Kia~~ 164 (238)
T 1sfl_A 95 INGIDMIDIEWQADIDIEKHQRIITHLQQYNKEVIISHHNFESTPPLDELQFIFFKMQKFNPEYV---KLAVM 164 (238)
T ss_dssp CTTCCEEEEECCTTSCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHTTCCSEE---EEEEC
T ss_pred hCCCCEEEEEccCCCChHHHHHHHHHHHhcCCEEEEEecCCCCCcCHHHHHHHHHHHHHcCCCEE---EEEec
Confidence 5 588887755431 211 11222233556667888 34 45 345678999999 55543
No 319
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=89.88 E-value=9.3 Score=36.49 Aligned_cols=131 Identities=13% Similarity=0.086 Sum_probs=76.6
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCC-------------CHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEe
Q 010240 318 RSITDAVKAALEGGATIIQLREKDA-------------DTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHL 384 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~-------------~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl 384 (514)
++..+.+..+.+.|+..|+|-+... +.+++.+.++..+......+..++|+-+.|.....|
T Consensus 103 ~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~g------ 176 (307)
T 3lye_A 103 IMVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLG------ 176 (307)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHC------
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccC------
Confidence 3456778888899999999966542 233333333333332322344455444332111100
Q ss_pred CCCCCCHHHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCC-CCEEE---
Q 010240 385 GQSDMPARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASK-LPVVA--- 460 (514)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~-~pv~a--- 460 (514)
.. ..++.++...+.|||.|++-. ....+.++++++.++ +|+++
T Consensus 177 ------ld----------------eAi~Ra~ay~eAGAD~ifi~~-----------~~~~~~~~~i~~~~~~~Pv~~n~~ 223 (307)
T 3lye_A 177 ------YE----------------ECIERLRAARDEGADVGLLEG-----------FRSKEQAAAAVAALAPWPLLLNSV 223 (307)
T ss_dssp ------HH----------------HHHHHHHHHHHTTCSEEEECC-----------CSCHHHHHHHHHHHTTSCBEEEEE
T ss_pred ------HH----------------HHHHHHHHHHHCCCCEEEecC-----------CCCHHHHHHHHHHccCCceeEEee
Confidence 00 012335556789999996521 124677888888764 88754
Q ss_pred ECCCCc-ccHHHHHHCCCCCCceEEEeeccc
Q 010240 461 IGGIGI-SNASDVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 461 ~GGi~~-~~~~~~~~~Ga~~~~gva~~~~i~ 490 (514)
.||-++ -+..++.++|+. -|......+
T Consensus 224 ~~g~~p~~t~~eL~~lGv~---~v~~~~~~~ 251 (307)
T 3lye_A 224 ENGHSPLITVEEAKAMGFR---IMIFSFATL 251 (307)
T ss_dssp TTSSSCCCCHHHHHHHTCS---EEEEETTTH
T ss_pred cCCCCCCCCHHHHHHcCCe---EEEEChHHH
Confidence 355554 468899999999 887766555
No 320
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=89.75 E-value=2.9 Score=41.25 Aligned_cols=169 Identities=15% Similarity=0.144 Sum_probs=107.1
Q ss_pred CCHHHHHHHHHhCCCCEEEEEc--CCCCHHHHHHHHHHHHHHHhhcCceEEEc-------------CcHHHHHhCCCCeE
Q 010240 318 RSITDAVKAALEGGATIIQLRE--KDADTRGFLEAAKACLQICCVHGVPLLIN-------------DRIDIALACDADGV 382 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~--~~~~~~~~~~~~~~~~~~~~~~~~~l~v~-------------~~~~~a~~~ga~gv 382 (514)
++..+.++.+.+.|.+-|---. ..-+.+++.+..+++...|++.|..+++. +++....++|++|+
T Consensus 41 ~~~~~Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp~~~~~Lg~s~~dl~~f~~lGi~gL 120 (385)
T 1x7f_A 41 EKDMAYISAAARHGFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDNNMEVILDVAPAVFDQLGISYSDLSFFAELGADGI 120 (385)
T ss_dssp HHHHHHHHHHHTTTEEEEEEEECCC--------HHHHHHHHHHHHTTCEEEEEECTTCC------CCCTHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHHHHHHHHcCCCEE
Confidence 3455789999999965443332 22344566777888889999999988862 45667788899999
Q ss_pred EeCCCCCCHHHHHhhcC-CCcEEEEecC-CHHHHHHhhhCCCc---EEEeccccCCCCCCCCccCCHHHHHHHHHc---C
Q 010240 383 HLGQSDMPARTARALLG-PDKIIGVSCK-TPEEAHQAWIDGAN---YIGCGGVYPTNTKANNLTVGLDGLKTVCLA---S 454 (514)
Q Consensus 383 hl~~~~~~~~~~~~~~~-~~~~ig~s~~-~~~e~~~a~~~g~d---~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~---~ 454 (514)
=+...-.....+.-... .+..|-..+. +.+++....+.|+| ++...-+||-+ .++++.+.+.+-.+. .
T Consensus 121 RLD~Gf~~~eia~ls~n~~glkIeLNASt~~~~l~~l~~~~~n~~~l~acHNFYPr~----~TGLs~~~f~~~n~~~k~~ 196 (385)
T 1x7f_A 121 RLDVGFDGLTEAKMTNNPYGLKIELNVSNDIAYLENILSHQANKSALIGCHNFYPQK----FTGLPYDYFIRCSERFKKH 196 (385)
T ss_dssp EESSCCSSHHHHHHTTCTTCCEEEEETTSCSSHHHHHTTSSCCGGGEEEECCCBCST----TCSBCHHHHHHHHHHHHHT
T ss_pred EEcCCCCHHHHHHHhcCCCCCEEEEeCcCCHHHHHHHHHcCCChHHeEEeeccCCCC----CCCCCHHHHHHHHHHHHHC
Confidence 88766544444433322 2455655443 67778888899998 78888888832 456778877765443 3
Q ss_pred CCCEEE--EC-----CC--------Ccc---------cHHHHHHCC-CCCCceEEEeecccCCC
Q 010240 455 KLPVVA--IG-----GI--------GIS---------NASDVMKIG-VSNLKGVAVVSALFDRE 493 (514)
Q Consensus 455 ~~pv~a--~G-----Gi--------~~~---------~~~~~~~~G-a~~~~gva~~~~i~~~~ 493 (514)
++++.| -| |. |.| -+..++..| .+ .|-+|.+..+.+
T Consensus 197 Gi~t~AFI~g~~~~rGPwpl~eGLPTLE~HR~~~~~~~a~~L~~~g~iD---~ViIGd~~~Se~ 257 (385)
T 1x7f_A 197 GIRSAAFITSHVANIGPWDINDGLCTLEEHRNLPIEVQAKHLWATGLID---DVIIGNAYASEE 257 (385)
T ss_dssp TCCCEEEECCSSCCBCSSSCCSCCBSBGGGTTSCHHHHHHHHHHTTSCC---EEEECSBCCCHH
T ss_pred CCcEEEEecCCccccCCccccCCCCchHHHCCCCHHHHHHHHHhcCCCC---EEEECCCCCCHH
Confidence 555444 23 11 222 256777888 77 999998776543
No 321
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=89.73 E-value=0.51 Score=43.49 Aligned_cols=108 Identities=19% Similarity=0.079 Sum_probs=65.3
Q ss_pred HHHHHHHHhCCCCEEEEEcCCC-CHHHHHHHHHHHHHHHhhcCceEEEcC----cHHHHHhCCCCeEEeC---C------
Q 010240 321 TDAVKAALEGGATIIQLREKDA-DTRGFLEAAKACLQICCVHGVPLLIND----RIDIALACDADGVHLG---Q------ 386 (514)
Q Consensus 321 ~~~~~~~~~~Gv~~v~lr~~~~-~~~~~~~~~~~~~~~~~~~~~~l~v~~----~~~~a~~~ga~gvhl~---~------ 386 (514)
.+.++.+++.|++.|.+--... ++..+.++.+ .+++.+..+++.- ..+.+.+.|+|.+-+. .
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~----~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~ 166 (232)
T 3igs_A 91 LDDVDALAQAGAAIIAVDGTARQRPVAVEALLA----RIHHHHLLTMADCSSVDDGLACQRLGADIIGTTMSGYTTPDTP 166 (232)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHH----HHHHTTCEEEEECCSHHHHHHHHHTTCSEEECTTTTSSSSSCC
T ss_pred HHHHHHHHHcCCCEEEECccccCCHHHHHHHHH----HHHHCCCEEEEeCCCHHHHHHHHhCCCCEEEEcCccCCCCCCC
Confidence 3457788999999998754321 2333333333 3345577776632 2445678899988321 1
Q ss_pred CCCCHHHHHhhc--CCCcEEEEecCCHHHHHHhhhCCCcEEEeccccC
Q 010240 387 SDMPARTARALL--GPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYP 432 (514)
Q Consensus 387 ~~~~~~~~~~~~--~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~ 432 (514)
........++.. ....+..-..+|++++.++.+.|+|.+.+|..+-
T Consensus 167 ~~~~~~~i~~l~~~~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal~ 214 (232)
T 3igs_A 167 EEPDLPLVKALHDAGCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAIT 214 (232)
T ss_dssp SSCCHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred CCCCHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCCEEEEehHhc
Confidence 112222232222 3344444455799999999999999999997664
No 322
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=89.68 E-value=1.6 Score=40.94 Aligned_cols=39 Identities=21% Similarity=0.277 Sum_probs=31.8
Q ss_pred HHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEecccc
Q 010240 393 TARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVY 431 (514)
Q Consensus 393 ~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf 431 (514)
.+|+.......+|..++|++++.++...|+|-+++|..+
T Consensus 200 ~vr~~~~~pv~vGfGI~~~e~~~~~~~~gADgvVVGSai 238 (267)
T 3vnd_A 200 QLAEFNAPPPLLGFGIAEPEQVRAAIKAGAAGAISGSAV 238 (267)
T ss_dssp HHHTTTCCCEEECSSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHH
Confidence 444445567888999999999998899999999998655
No 323
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=89.52 E-value=0.33 Score=47.94 Aligned_cols=62 Identities=19% Similarity=0.142 Sum_probs=44.3
Q ss_pred HHHHHHHHHcC-CCCEEEECCCC-cccHHHHHHCCCCCCceEEEeeccc-CCCC-HHHHHHHHHHHHHH
Q 010240 444 LDGLKTVCLAS-KLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALF-DREC-ILPESKKLHAVLMD 508 (514)
Q Consensus 444 ~~~l~~~~~~~-~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~-~~~~-~~~~~~~~~~~~~~ 508 (514)
++.+.++.+.. ++||++.|||. .+++.+.+.+||+ .|.+++++. .-.. +.+..+.|.+.+.+
T Consensus 265 ~~~v~~~~~~~~~~pIIg~GGI~s~~Da~e~i~aGAs---~Vqv~Ta~~y~GP~~~~~I~~~L~~~L~~ 330 (354)
T 3tjx_A 265 LANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGAS---MVQVGTALQEEGPSIFERLTSELLGVMAK 330 (354)
T ss_dssp HHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTEE---EEEECHHHHHHCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcEEEeCCcCCHHHHHHHHHcCCC---EEEEChhhhhcCchHHHHHHHHHHHHHHH
Confidence 34455555554 78999999996 7899999999999 999999975 3333 34445555555554
No 324
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=89.39 E-value=2.6 Score=39.96 Aligned_cols=128 Identities=17% Similarity=0.229 Sum_probs=78.6
Q ss_pred HHHHHHHHHHhhcCceEEEcC------------cHHHHHhCCCCeEEeCCCCCC----------------HHHHHhh---
Q 010240 349 EAAKACLQICCVHGVPLLIND------------RIDIALACDADGVHLGQSDMP----------------ARTARAL--- 397 (514)
Q Consensus 349 ~~~~~~~~~~~~~~~~l~v~~------------~~~~a~~~ga~gvhl~~~~~~----------------~~~~~~~--- 397 (514)
+.+..++.+++..+.++++.- .+....+.|+.|||+.....+ ...++..
T Consensus 69 em~~~~~~I~r~~~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a 148 (287)
T 3b8i_A 69 EFVEQATRIGRVARLPVIADADHGYGNALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEA 148 (287)
T ss_dssp HHHHHHHHHHTTCSSCEEEECTTCSSSHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHc
Confidence 344445555656667776521 133345689999999765421 1222211
Q ss_pred -cCCCc-EEEEecC---CHH----HHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEE-CCCC-c
Q 010240 398 -LGPDK-IIGVSCK---TPE----EAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAI-GGIG-I 466 (514)
Q Consensus 398 -~~~~~-~ig~s~~---~~~----e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~-GGi~-~ 466 (514)
...+. +++.+-. ..+ .++...++|||.|++=.+ ...+.++++.+.+++|++.+ ||-+ .
T Consensus 149 ~~~~~~~i~aRtdaa~~gl~~ai~Ra~ay~eAGAd~i~~e~~-----------~~~~~~~~i~~~~~~P~ii~~~g~~~~ 217 (287)
T 3b8i_A 149 RVDPALTIIARTNAELIDVDAVIQRTLAYQEAGADGICLVGV-----------RDFAHLEAIAEHLHIPLMLVTYGNPQL 217 (287)
T ss_dssp CCSTTSEEEEEEETTTSCHHHHHHHHHHHHHTTCSEEEEECC-----------CSHHHHHHHHTTCCSCEEEECTTCGGG
T ss_pred CCCCCcEEEEechhhhcCHHHHHHHHHHHHHcCCCEEEecCC-----------CCHHHHHHHHHhCCCCEEEeCCCCCCC
Confidence 12333 4444321 223 355666899999976321 14678899999899998833 3444 4
Q ss_pred ccHHHHHHCCCCCCceEEEeeccc
Q 010240 467 SNASDVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 467 ~~~~~~~~~Ga~~~~gva~~~~i~ 490 (514)
-+..++.++|+. -|..+..++
T Consensus 218 ~~~~eL~~lGv~---~v~~~~~~~ 238 (287)
T 3b8i_A 218 RDDARLARLGVR---VVVNGHAAY 238 (287)
T ss_dssp CCHHHHHHTTEE---EEECCCHHH
T ss_pred CCHHHHHHcCCc---EEEEChHHH
Confidence 578999999999 888887776
No 325
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=89.22 E-value=2.3 Score=38.38 Aligned_cols=87 Identities=15% Similarity=0.085 Sum_probs=59.8
Q ss_pred HHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCc--ccHHHHHHCCCCCCceEEEeec
Q 010240 411 PEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGI--SNASDVMKIGVSNLKGVAVVSA 488 (514)
Q Consensus 411 ~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~--~~~~~~~~~Ga~~~~gva~~~~ 488 (514)
.+.+..+.+.|+|++-+. +++ .+.+..-..|++.++++++.++.|+.+-+.++. +.+..+.++|++ +|.+...
T Consensus 19 ~~~~~~~~~~G~~~i~~~-~~d-g~~~~~~~~g~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~~~~gad---~v~vh~~ 93 (220)
T 2fli_A 19 ASELARIEETDAEYVHID-IMD-GQFVPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGAD---IMTIHTE 93 (220)
T ss_dssp HHHHHHHHHTTCCEEEEE-EEB-SSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHHHTCS---EEEEEGG
T ss_pred HHHHHHHHHcCCCEEEEE-eec-CCCCCccccCHHHHHHHHHhCCCCEEEEEeecCHHHHHHHHHHcCCC---EEEEccC
Confidence 345677778999997543 222 111122345799999999877889999888873 368899999999 9988754
Q ss_pred ccCCCCHHHHHHHHHH
Q 010240 489 LFDRECILPESKKLHA 504 (514)
Q Consensus 489 i~~~~~~~~~~~~~~~ 504 (514)
-. +++.+..+.+++
T Consensus 94 ~~--~~~~~~~~~~~~ 107 (220)
T 2fli_A 94 ST--RHIHGALQKIKA 107 (220)
T ss_dssp GC--SCHHHHHHHHHH
T ss_pred cc--ccHHHHHHHHHH
Confidence 33 556655555543
No 326
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=89.14 E-value=2.1 Score=44.09 Aligned_cols=111 Identities=19% Similarity=0.220 Sum_probs=71.3
Q ss_pred CHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhc-CceEEEc-----CcHHHHHhCCCCeEEeCCC-----
Q 010240 319 SITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVH-GVPLLIN-----DRIDIALACDADGVHLGQS----- 387 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~-~~~l~v~-----~~~~~a~~~ga~gvhl~~~----- 387 (514)
...+.++.+++.|++.+.+-..........+.+++ +...+ +.+++.. +....+.++|++++.++..
T Consensus 233 ~~~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~---l~~~~p~~pvi~G~v~t~~~a~~~~~~Gad~I~vg~g~g~~~ 309 (491)
T 1zfj_A 233 DTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAE---IRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVGIGPGSIC 309 (491)
T ss_dssp THHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHH---HHHHCSSSCEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTB
T ss_pred hHHHHHHHHHHcCCCeEEEeeecCcchhHHHHHHH---HHHHCCCCcEeCCCccCHHHHHHHHHcCCCEEEECccCCcce
Confidence 45677888999999999987654444444444444 44455 6666631 2345677899999988631
Q ss_pred ---------CCCHHH---HHh---hcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccC
Q 010240 388 ---------DMPART---ARA---LLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYP 432 (514)
Q Consensus 388 ---------~~~~~~---~~~---~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~ 432 (514)
...... +.. ..+...+..-.+.+..++.+|..+|||.+.+|..|.
T Consensus 310 ~tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~~GA~~v~vG~~~~ 369 (491)
T 1zfj_A 310 TTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAVMLGSMFA 369 (491)
T ss_dssp CHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTT
T ss_pred EEeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHHcCCcceeeCHHhh
Confidence 111111 111 122333443456799999999999999999998775
No 327
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=89.13 E-value=1.5 Score=41.45 Aligned_cols=79 Identities=22% Similarity=0.256 Sum_probs=59.7
Q ss_pred CCcEEEEecCCHHHHHHhhhCCCcEEEec-cccCCCCCCCCccCCHHHHHHHHHcCCCCEEEE----CC---CC------
Q 010240 400 PDKIIGVSCKTPEEAHQAWIDGANYIGCG-GVYPTNTKANNLTVGLDGLKTVCLASKLPVVAI----GG---IG------ 465 (514)
Q Consensus 400 ~~~~ig~s~~~~~e~~~a~~~g~d~v~~~-~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~----GG---i~------ 465 (514)
...++=+-|.|++++..|.+.|||.|=+- ..+. ++ ...+...++.+++..++||+++ || .+
T Consensus 38 ~~~~lEvc~~s~~~a~~A~~gGAdRIELc~~l~~----GG-lTPS~g~i~~a~~~~~ipV~vMIRPRgGdF~Ys~~E~~~ 112 (287)
T 3iwp_A 38 NGFLMEVCVDSVESAVNAERGGADRIELCSGLSE----GG-TTPSMGVLQVVKQSVQIPVFVMIRPRGGDFLYSDREIEV 112 (287)
T ss_dssp CCSEEEEEESSHHHHHHHHHHTCSEEEECBCGGG----TC-BCCCHHHHHHHHTTCCSCEEEECCSSSSCSCCCHHHHHH
T ss_pred CCceEEEEeCCHHHHHHHHHhCCCEEEECCCCCC----CC-CCCCHHHHHHHHHhcCCCeEEEEecCCCCcccCHHHHHH
Confidence 35567777899999999999999999553 1111 11 2236788888888889999998 55 12
Q ss_pred -cccHHHHHHCCCCCCceEEEe
Q 010240 466 -ISNASDVMKIGVSNLKGVAVV 486 (514)
Q Consensus 466 -~~~~~~~~~~Ga~~~~gva~~ 486 (514)
.+++..++++|++ ||.+|
T Consensus 113 M~~dI~~~~~~GAd---GvVfG 131 (287)
T 3iwp_A 113 MKADIRLAKLYGAD---GLVFG 131 (287)
T ss_dssp HHHHHHHHHHTTCS---EEEEC
T ss_pred HHHHHHHHHHcCCC---EEEEe
Confidence 1478999999999 99988
No 328
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=89.11 E-value=2.1 Score=39.59 Aligned_cols=128 Identities=16% Similarity=0.130 Sum_probs=78.2
Q ss_pred cHHHHHhCCCCeEEeCCCCC------CHH----HHHhhcCCCcEEEEecC-CHHH-------------HHHhh-hCCCc-
Q 010240 370 RIDIALACDADGVHLGQSDM------PAR----TARALLGPDKIIGVSCK-TPEE-------------AHQAW-IDGAN- 423 (514)
Q Consensus 370 ~~~~a~~~ga~gvhl~~~~~------~~~----~~~~~~~~~~~ig~s~~-~~~e-------------~~~a~-~~g~d- 423 (514)
.+....++|+++|-++.+.. ... +.+..+..++.+.+-+. +.+| +..+. ..+.+
T Consensus 78 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGE~leere~g~t~~vv~~Ql~~~l~~~~~~~ 157 (250)
T 1yya_A 78 SARMLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLEEGITPILCVGEPLEVREKGEAVPYTLRQLRGSLEGVEPPG 157 (250)
T ss_dssp CHHHHHHTTCSEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHTTTCCCSS
T ss_pred CHHHHHHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHH
Confidence 46677777888877665321 111 33444556777766665 4432 12222 23456
Q ss_pred ----EEEeccccCCCCCCCCccCCH----HHHHHHHHc-------CCCCEEEECCCCcccHHHHHHC-CCCCCceEEEee
Q 010240 424 ----YIGCGGVYPTNTKANNLTVGL----DGLKTVCLA-------SKLPVVAIGGIGISNASDVMKI-GVSNLKGVAVVS 487 (514)
Q Consensus 424 ----~v~~~~vf~t~~k~~~~~~g~----~~l~~~~~~-------~~~pv~a~GGi~~~~~~~~~~~-Ga~~~~gva~~~ 487 (514)
+|.+=|+..-.|...+++-.. ..++.+... -.++|+==|+++++|+.++++. ++| |+-+|+
T Consensus 158 ~~~vvIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diD---G~LVGg 234 (250)
T 1yya_A 158 PEALVIAYEPVWAIGTGKNATPEDAEAMHQAIRKALSERYGEAFASRVRILYGGSVNPKNFADLLSMPNVD---GGLVGG 234 (250)
T ss_dssp GGGCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTCEEEEESSCCTTTHHHHHTSTTCC---EEEESG
T ss_pred cCcEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCCCHHHHHHHHcCCCCC---eeEeeH
Confidence 788888887555333322111 223333211 2589999999999999999987 666 999999
Q ss_pred cccCCCCHHHHHH
Q 010240 488 ALFDRECILPESK 500 (514)
Q Consensus 488 ~i~~~~~~~~~~~ 500 (514)
+-++++++.+.++
T Consensus 235 AsL~a~~F~~ii~ 247 (250)
T 1yya_A 235 ASLELESFLALLR 247 (250)
T ss_dssp GGSSHHHHHHHHH
T ss_pred HHhChHHHHHHHH
Confidence 9997666555543
No 329
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=89.08 E-value=4.6 Score=39.27 Aligned_cols=143 Identities=18% Similarity=0.152 Sum_probs=93.9
Q ss_pred HHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeC-CCCCCHHHHHhhcCC
Q 010240 322 DAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLG-QSDMPARTARALLGP 400 (514)
Q Consensus 322 ~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~-~~~~~~~~~~~~~~~ 400 (514)
+.+.++++.|.+.+.+--...+.++-++..+++.+.|+.+|+.+-.. +| +++ ..+.......
T Consensus 115 ~~i~~~i~~GFtSVMiDgS~lp~eENi~~Tk~vv~~ah~~gvsVEaE--------lG----~iGG~Edgv~~~~~----- 177 (349)
T 3elf_A 115 QRVSKGGNPLFQSHMWDGSAVPIDENLAIAQELLKAAAAAKIILEIE--------IG----VVGGEEDGVANEIN----- 177 (349)
T ss_dssp HHHHTTCCCSCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEE--------ES----CCBC---------------
T ss_pred HHHHHHhhcCCCEEEecCCCCCHHHHHHHHHHHHHHHHHcCCeEEEE--------ee----ccccccCCcccccc-----
Confidence 44445555678999998888898888999999999999998876431 11 111 1111000000
Q ss_pred CcEEEEecCCHHHHHHhh-hCC-----CcEEEe--ccccCCCCCCCCccCCHHHHHHHHHcC-----------CCCEEEE
Q 010240 401 DKIIGVSCKTPEEAHQAW-IDG-----ANYIGC--GGVYPTNTKANNLTVGLDGLKTVCLAS-----------KLPVVAI 461 (514)
Q Consensus 401 ~~~ig~s~~~~~e~~~a~-~~g-----~d~v~~--~~vf~t~~k~~~~~~g~~~l~~~~~~~-----------~~pv~a~ 461 (514)
. .--.+|+|+.+-. +.| +|.+.+ |.+.- ..||+.+.+.++.|+++.+.+ ++|++-=
T Consensus 178 ~----~~yT~Peea~~Fv~~tg~~~~gvD~LAvaiGt~HG-~Yk~g~p~L~~~~L~~I~~~v~~~~~~~~~~~~vpLVlH 252 (349)
T 3elf_A 178 E----KLYTSPEDFEKTIEALGAGEHGKYLLAATFGNVHG-VYKPGNVKLRPDILAQGQQVAAAKLGLPADAKPFDFVFH 252 (349)
T ss_dssp -------CCCHHHHHHHHHHHTTSTTSCEEEEECSSCBSS-CCCTTSSCCCTHHHHHHHHHHHHHHTCCTTCCCCCEEEC
T ss_pred c----ccCCCHHHHHHHHHHhCCCCCCceEEEEecCCccc-CCCCCCCccCHHHHHHHHHHHHhhcCCccccCCCcEEEe
Confidence 0 1135799987754 556 898866 34332 123344567889999887654 5899988
Q ss_pred CCCC--cccHHHHHHCCCCCCceEEEeecc
Q 010240 462 GGIG--ISNASDVMKIGVSNLKGVAVVSAL 489 (514)
Q Consensus 462 GGi~--~~~~~~~~~~Ga~~~~gva~~~~i 489 (514)
||-. .+++.++.+.|.. -|=+.+.+
T Consensus 253 GgSG~p~e~i~~ai~~GV~---KiNi~Tdl 279 (349)
T 3elf_A 253 GGSGSLKSEIEEALRYGVV---KMNVDTDT 279 (349)
T ss_dssp CCTTCCHHHHHHHHHTTEE---EEEECHHH
T ss_pred CCCCCCHHHHHHHHHcCCE---EEEcchHH
Confidence 8764 6889999999988 88887765
No 330
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=88.96 E-value=5.9 Score=37.10 Aligned_cols=162 Identities=14% Similarity=0.026 Sum_probs=91.5
Q ss_pred HHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEE--c--C--cHHHHHhCCCCeEEeCCCCCCHHHHH
Q 010240 322 DAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLI--N--D--RIDIALACDADGVHLGQSDMPARTAR 395 (514)
Q Consensus 322 ~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v--~--~--~~~~a~~~ga~gvhl~~~~~~~~~~~ 395 (514)
+.++.+...|.+++.+-..+...+. .+. +.....+...+.+++| + + +++.+.+.|+++|.+|.-.-. .+++
T Consensus 30 ~~~e~a~~~GaD~v~lDlE~~~~~~-~~~-~~~~~a~~~~~~~~~VRv~~~~~~~i~~~l~~g~~~I~~P~V~s~-ee~~ 106 (267)
T 2vws_A 30 YMAEIAATSGYDWLLIDGEHAPNTI-QDL-YHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTA-EQAR 106 (267)
T ss_dssp HHHHHHHTTCCSEEEEETTTSCCCH-HHH-HHHHHHHTTSSSEEEEECSSCCHHHHHHHHHTTCCEEEECCCCSH-HHHH
T ss_pred HHHHHHHhCCCCEEEEcCCCCCCCH-HHH-HHHHHHHHhCCCcEEEEeCCCCHHHHHHHHHhCCCEEEeCCCCCH-HHHH
Confidence 4677888899999999765543222 222 2222233344665655 2 2 345667889999999886532 1222
Q ss_pred ---hhcC------------------------------CCcEEEEecCCHHHHHHhh----hCCCcEEEeccccCCCCCCC
Q 010240 396 ---ALLG------------------------------PDKIIGVSCKTPEEAHQAW----IDGANYIGCGGVYPTNTKAN 438 (514)
Q Consensus 396 ---~~~~------------------------------~~~~ig~s~~~~~e~~~a~----~~g~d~v~~~~vf~t~~k~~ 438 (514)
+... ....+++-+-|++-+..+. .-|+|.+++|+-=-+.+-..
T Consensus 107 ~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av~~~~eIa~~~gvd~l~iG~~DL~~~lg~ 186 (267)
T 2vws_A 107 QVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGY 186 (267)
T ss_dssp HHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHHHTHHHHHTSTTCCEEEECHHHHHHHTTC
T ss_pred HHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHHHHHHHHhCCCCCCEEEEChHHHHHHhCC
Confidence 1110 0145676677766544332 34799999987421111100
Q ss_pred -CccCCHH---HHHHHH---HcCCCCEEEECCCCcccHHHHHHCCCCCCceEEEeeccc
Q 010240 439 -NLTVGLD---GLKTVC---LASKLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 439 -~~~~g~~---~l~~~~---~~~~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~ 490 (514)
..+...+ .++.+. +..++|+....+ +++.+..++..|++ .+.+++...
T Consensus 187 ~~~~~~p~v~~a~~~iv~aa~aaG~~~~v~~~-d~~~a~~~~~~G~~---~~s~~~d~~ 241 (267)
T 2vws_A 187 PDNAGHPEVQRIIETSIRRIRAAGKAAGFLAV-APDMAQQCLAWGAN---FVAVGVDTM 241 (267)
T ss_dssp SSSCCTHHHHHHHHHHHHHHHHTTCEEEEECS-SHHHHHHHHHTTCC---EEEEEEHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCCeEEEecC-CHHHHHHHHHCCCC---EEEEchHHH
Confidence 0111122 223332 334777655544 78888999999999 999997543
No 331
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=88.88 E-value=3.2 Score=37.29 Aligned_cols=95 Identities=15% Similarity=0.208 Sum_probs=61.1
Q ss_pred HHhCCCCeEEeCCCCCCHH-HHHhhcCCCcEEEEecC-CHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHH
Q 010240 374 ALACDADGVHLGQSDMPAR-TARALLGPDKIIGVSCK-TPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVC 451 (514)
Q Consensus 374 a~~~ga~gvhl~~~~~~~~-~~~~~~~~~~~ig~s~~-~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~ 451 (514)
+.+.|++.+.++....... .++....++..+|+.+- +.+++..|.+.|+|++..+. ...+.++..+
T Consensus 34 l~~gGv~~iel~~k~~~~~~~i~~~~~~~~~~gag~vl~~d~~~~A~~~GAd~v~~~~------------~d~~v~~~~~ 101 (207)
T 2yw3_A 34 LEEEGVGALEITLRTEKGLEALKALRKSGLLLGAGTVRSPKEAEAALEAGAAFLVSPG------------LLEEVAALAQ 101 (207)
T ss_dssp HHHTTCCEEEEECSSTHHHHHHHHHTTSSCEEEEESCCSHHHHHHHHHHTCSEEEESS------------CCHHHHHHHH
T ss_pred HHHcCCCEEEEeCCChHHHHHHHHHhCCCCEEEeCeEeeHHHHHHHHHcCCCEEEcCC------------CCHHHHHHHH
Confidence 3455666666665544322 12222225777887664 78899999999999995331 1234444443
Q ss_pred HcCCCCEEEECCCCcccHHHHHHCCCCCCceEEE
Q 010240 452 LASKLPVVAIGGIGISNASDVMKIGVSNLKGVAV 485 (514)
Q Consensus 452 ~~~~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~ 485 (514)
. .++|++. |=-|++.+..+.+.|++ .+.+
T Consensus 102 ~-~g~~~i~-G~~t~~e~~~A~~~Gad---~v~~ 130 (207)
T 2yw3_A 102 A-RGVPYLP-GVLTPTEVERALALGLS---ALKF 130 (207)
T ss_dssp H-HTCCEEE-EECSHHHHHHHHHTTCC---EEEE
T ss_pred H-hCCCEEe-cCCCHHHHHHHHHCCCC---EEEE
Confidence 3 5778765 53468888889999999 8877
No 332
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=88.71 E-value=3 Score=39.08 Aligned_cols=128 Identities=14% Similarity=0.066 Sum_probs=79.4
Q ss_pred cHHHHHhCCCCeEEeCCCC------CCHH----HHHhhcCCCcEEEEecC-CHHHHHHh--------------h----hC
Q 010240 370 RIDIALACDADGVHLGQSD------MPAR----TARALLGPDKIIGVSCK-TPEEAHQA--------------W----ID 420 (514)
Q Consensus 370 ~~~~a~~~ga~gvhl~~~~------~~~~----~~~~~~~~~~~ig~s~~-~~~e~~~a--------------~----~~ 420 (514)
.+....++|+++|-++... .... +++..+..++.+.+-+. +.+| +++ . ..
T Consensus 98 S~~mLkd~G~~~ViiGHSERR~~f~Etde~V~~Kv~~Al~~GL~pI~CvGEtlee-Reag~t~~vv~~Ql~~~l~~~~~~ 176 (275)
T 1mo0_A 98 SPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGIKVVFCIGEKLEE-REAGHTKDVNFRQLQAIVDKGVSW 176 (275)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHH-HHTTCHHHHHHHHHHHHHTTTCCS
T ss_pred CHHHHHHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHH-HhCCChHHHHHHHHHHHHhhhhhh
Confidence 4778889999999887642 1112 34444556777777665 4443 221 1 22
Q ss_pred CCcEEEeccccCCCCCCCCccCCH----HHHHHHHH-cC------CCCEEEECCCCcccHHHHHHCCCCCCceEEEeecc
Q 010240 421 GANYIGCGGVYPTNTKANNLTVGL----DGLKTVCL-AS------KLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSAL 489 (514)
Q Consensus 421 g~d~v~~~~vf~t~~k~~~~~~g~----~~l~~~~~-~~------~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i 489 (514)
.-.+|..=|+..-.|...+++-.. ..++.+.. .+ .++|+=-|+++++|+.+++... +|||+-+|++-
T Consensus 177 ~~vvIAYEPvWAIGTGktAtpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV~~~N~~el~~~~--diDG~LVGgAS 254 (275)
T 1mo0_A 177 ENIVIAYEPVWAIGTGKTASGEQAQEVHEWIRAFLKEKVSPAVADATRIIYGGSVTADNAAELGKKP--DIDGFLVGGAS 254 (275)
T ss_dssp TTEEEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEEESSCCTTTHHHHTTST--TCCEEEESGGG
T ss_pred cCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhhChhhcCcccEEEcCCCCHhhHHHHhcCC--CCCeeEechHH
Confidence 345677778887554333322111 22332221 12 4899999999999999988742 45599999999
Q ss_pred cCCCCHHHHHH
Q 010240 490 FDRECILPESK 500 (514)
Q Consensus 490 ~~~~~~~~~~~ 500 (514)
++++++.+.++
T Consensus 255 Lka~~F~~Ii~ 265 (275)
T 1mo0_A 255 LKPDFVKIINA 265 (275)
T ss_dssp GSTHHHHHHHH
T ss_pred hChHHHHHHHH
Confidence 98877766654
No 333
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=88.53 E-value=15 Score=33.84 Aligned_cols=165 Identities=14% Similarity=0.056 Sum_probs=95.1
Q ss_pred ceEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEE-cCcHHHHHhCCCC
Q 010240 302 LFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLI-NDRIDIALACDAD 380 (514)
Q Consensus 302 ~~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v-~~~~~~a~~~ga~ 380 (514)
..++++|.... .+...++++.|++-... |. ...........+.........++++ .|+.......
T Consensus 75 ~pvi~lt~~~~--------~~~~~~a~~~Ga~dyl~--Kp-~~~~~~~~~~~~~~~~~~~~~~ILivDD~~~~~~~l--- 140 (259)
T 3luf_A 75 LPVVILTADIS--------EDKREAWLEAGVLDYVM--KD-SRHSLQYAVGLVHRLYLNQQIEVLVVDDSRTSRHRT--- 140 (259)
T ss_dssp CCEEEEECC-C--------HHHHHHHHHTTCCEEEE--CS-SHHHHHHHHHHHHHHHHHTTCEEEEECSCHHHHHHH---
T ss_pred CCEEEEEccCC--------HHHHHHHHHCCCcEEEe--CC-chhHHHHHHHhhhhHhhcCCCcEEEEeCCHHHHHHH---
Confidence 56778886542 23455678889876543 22 2233333333333333334455554 4443322210
Q ss_pred eEEeCCCCCCHHHHHhhcCCCcEEEEecCCHHHHHHhhhCC--CcEEEeccccCCCCCCCCccCCHHHHHHHHHcC---C
Q 010240 381 GVHLGQSDMPARTARALLGPDKIIGVSCKTPEEAHQAWIDG--ANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS---K 455 (514)
Q Consensus 381 gvhl~~~~~~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g--~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~---~ 455 (514)
....+ ..+..+ ..+.+.+|+....+.. .|.|++---.| +. -|++.++++++.. +
T Consensus 141 ----------~~~L~---~~~~~v-~~a~~~~eal~~l~~~~~~dlvllD~~mP-----~~--dG~~l~~~lr~~~~~~~ 199 (259)
T 3luf_A 141 ----------MAQLR---KQLLQV-HEASHAREALATLEQHPAIRLVLVDYYMP-----EI--DGISLVRMLRERYSKQQ 199 (259)
T ss_dssp ----------HHHHH---TTTCEE-EEESSHHHHHHHHHHCTTEEEEEECSCCS-----SS--CHHHHHHHHHHHCCTTT
T ss_pred ----------HHHHH---HcCcEE-EEeCCHHHHHHHHhcCCCCCEEEEcCCCC-----CC--CHHHHHHHHHhccCCCC
Confidence 01111 123333 3577888877766433 58887754333 12 3789999998753 5
Q ss_pred CCEEEECCCC-cccHHHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 456 LPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 456 ~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
+||+.+-+-. .+....++++||+ ++ +.+.-++.+...++++.++..
T Consensus 200 ~~ii~~s~~~~~~~~~~a~~~Ga~---~y-----l~KP~~~~~L~~~i~~~l~~~ 246 (259)
T 3luf_A 200 LAIIGISVSDKRGLSARYLKQGAN---DF-----LNQPFEPEELQCRVSHNLEAL 246 (259)
T ss_dssp SEEEEEECSSSSSHHHHHHHTTCS---EE-----EESSCCHHHHHHHHHHHHHHH
T ss_pred CeEEEEEccCCHHHHHHHHhcChh---he-----EcCCCCHHHHHHHHHHHHHhH
Confidence 8888776654 5667889999999 65 556677777777777776654
No 334
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=88.33 E-value=0.32 Score=56.13 Aligned_cols=78 Identities=15% Similarity=0.016 Sum_probs=54.4
Q ss_pred CHHHHHHhhhCCCcEEEeccccC-CCCCCC----CccCC-HHHHHHHHHcC-------CCCEEEECCCC-cccHHHHHHC
Q 010240 410 TPEEAHQAWIDGANYIGCGGVYP-TNTKAN----NLTVG-LDGLKTVCLAS-------KLPVVAIGGIG-ISNASDVMKI 475 (514)
Q Consensus 410 ~~~e~~~a~~~g~d~v~~~~vf~-t~~k~~----~~~~g-~~~l~~~~~~~-------~~pv~a~GGi~-~~~~~~~~~~ 475 (514)
..+++..+.+.|+|+|.++-.-. |...+. ..... ...+.++.+.+ ++||+|.|||. ..++..++.+
T Consensus 1041 i~~~A~~a~kAGAD~IvVsG~eGGTgasp~~~~~~~GlPt~~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakALaL 1120 (1520)
T 1ofd_A 1041 IGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALM 1120 (1520)
T ss_dssp HHHHHHHHHHTTCSEEEEECTTCCCSSEEHHHHHHBCCCHHHHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHT
T ss_pred hHHHHHHHHHcCCCEEEEeCCCCccCCCcchhhcCCchhHHHHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHHc
Confidence 46788889999999998844321 111110 00122 24455554432 69999999996 7899999999
Q ss_pred CCCCCceEEEeeccc
Q 010240 476 GVSNLKGVAVVSALF 490 (514)
Q Consensus 476 Ga~~~~gva~~~~i~ 490 (514)
||+ +|.++++++
T Consensus 1121 GAd---aV~iGTafL 1132 (1520)
T 1ofd_A 1121 GAE---EYGFGSIAM 1132 (1520)
T ss_dssp TCS---EEECSHHHH
T ss_pred CCC---eeEEcHHHH
Confidence 999 999999985
No 335
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=88.23 E-value=2.6 Score=40.20 Aligned_cols=115 Identities=16% Similarity=0.183 Sum_probs=71.2
Q ss_pred CCHHHHHHHHHhCCCCEEEEE-----cCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHH
Q 010240 318 RSITDAVKAALEGGATIIQLR-----EKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPAR 392 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~ 392 (514)
+.+.+.++.+++.|++.+.+- ...++.+|..+.++...+.+.. ++
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~----------------------------- 70 (292)
T 2vc6_A 21 VALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANG-RV----------------------------- 70 (292)
T ss_dssp HHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTT-SS-----------------------------
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CC-----------------------------
Confidence 457788888899999988763 3356777766666555443321 12
Q ss_pred HHHhhcCCCcEEEEecCC----HHHHHHhhhCCCcEEEeccccCCCCCCCCccCCH-HHHHHHHHcCCCCEEEE-----C
Q 010240 393 TARALLGPDKIIGVSCKT----PEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGL-DGLKTVCLASKLPVVAI-----G 462 (514)
Q Consensus 393 ~~~~~~~~~~~ig~s~~~----~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~-~~l~~~~~~~~~pv~a~-----G 462 (514)
..+.|++..+ .+.++.|.+.|+|.+.+.|-+.. |+ +.-++ ++++.+.+..++||+.- -
T Consensus 71 --------pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~--~~--s~~~l~~~f~~ia~a~~lPiilYn~P~~t 138 (292)
T 2vc6_A 71 --------PVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYN--KP--TQEGIYQHFKAIDAASTIPIIVYNIPGRS 138 (292)
T ss_dssp --------CBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSS--CC--CHHHHHHHHHHHHHHCSSCEEEEECHHHH
T ss_pred --------cEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCC--CC--CHHHHHHHHHHHHHhCCCCEEEEeCcccc
Confidence 3445554443 34466788889998877543331 22 11233 67778888788888873 2
Q ss_pred C--CCcccHHHHHH
Q 010240 463 G--IGISNASDVMK 474 (514)
Q Consensus 463 G--i~~~~~~~~~~ 474 (514)
| ++++.+.++.+
T Consensus 139 g~~l~~~~~~~La~ 152 (292)
T 2vc6_A 139 AIEIHVETLARIFE 152 (292)
T ss_dssp SCCCCHHHHHHHHH
T ss_pred CcCCCHHHHHHHHh
Confidence 3 45677777665
No 336
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=88.20 E-value=2.7 Score=36.96 Aligned_cols=60 Identities=22% Similarity=0.260 Sum_probs=41.8
Q ss_pred HHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEEEee-ccc
Q 010240 414 AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVAVVS-ALF 490 (514)
Q Consensus 414 ~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva~~~-~i~ 490 (514)
++......+|++ -+.| + +.-.+.++++ .++|++|-|+|. +|++.+ +++||+ +|..+. .+|
T Consensus 121 ~~~I~~~kPD~i---EiLP-----g--~v~p~~I~~v---~~~PiIaGGlI~t~edv~~-l~aGA~---aIsTs~~~LW 182 (188)
T 1vkf_A 121 IEQIETLGVDVV---EVLP-----G--AVAPKVARKI---PGRTVIAAGLVETEEEARE-ILKHVS---AISTSSRILW 182 (188)
T ss_dssp HHHHHHHTCSEE---EEES-----G--GGHHHHHTTS---TTSEEEEESCCCSHHHHHH-HTTTSS---EEEECCHHHH
T ss_pred hhhccccCCCeE---eecC-----C--CchHHHHHHh---cCCCEEEECCcCCHHHHHH-HHCCCe---EEEeCCHHHh
Confidence 444445678888 3343 1 1123555555 689999999996 889999 999999 988775 444
No 337
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=88.10 E-value=3.2 Score=40.21 Aligned_cols=106 Identities=17% Similarity=0.118 Sum_probs=68.0
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEc--C--cHHHHHhCCCCeEEeCC-------
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLIN--D--RIDIALACDADGVHLGQ------- 386 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~--~--~~~~a~~~ga~gvhl~~------- 386 (514)
.++.+.++.+++.|++.|++-...+ .+ .++.+ ++.+.+++.. . ....+.+.|+|++.+..
T Consensus 83 ~~~~~~~~~~~~~g~d~V~~~~g~p--~~---~~~~l----~~~gi~vi~~v~t~~~a~~~~~~GaD~i~v~g~~~GG~~ 153 (328)
T 2gjl_A 83 VPYAEYRAAIIEAGIRVVETAGNDP--GE---HIAEF----RRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHP 153 (328)
T ss_dssp CCHHHHHHHHHHTTCCEEEEEESCC--HH---HHHHH----HHTTCEEEEEESSHHHHHHHHHTTCSEEEEECTTCSBCC
T ss_pred ccHHHHHHHHHhcCCCEEEEcCCCc--HH---HHHHH----HHcCCCEEeeCCCHHHHHHHHHcCCCEEEEECCCCCcCC
Confidence 3467788999999999999876532 22 22223 3447776652 2 23456688999987721
Q ss_pred CC---CCHH---HHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccC
Q 010240 387 SD---MPAR---TARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYP 432 (514)
Q Consensus 387 ~~---~~~~---~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~ 432 (514)
.. .... .+++......+..-..++.+.+.++...|+|.|.+|.-|-
T Consensus 154 G~~~~~~~~~l~~v~~~~~iPviaaGGI~~~~~v~~al~~GAdgV~vGs~~~ 205 (328)
T 2gjl_A 154 GEDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINMGTRFL 205 (328)
T ss_dssp CSSCCCHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred CCccccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHH
Confidence 11 1112 2333333455555566789999999999999999986654
No 338
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=87.93 E-value=4.7 Score=36.72 Aligned_cols=110 Identities=18% Similarity=0.075 Sum_probs=65.1
Q ss_pred HHHHHHHHhCCCCEEEEEcCCCC-H--HHHHHHHHHHHHHHhhcCceEEEcC----cHHHHHhCCCCeE--EeCCC---C
Q 010240 321 TDAVKAALEGGATIIQLREKDAD-T--RGFLEAAKACLQICCVHGVPLLIND----RIDIALACDADGV--HLGQS---D 388 (514)
Q Consensus 321 ~~~~~~~~~~Gv~~v~lr~~~~~-~--~~~~~~~~~~~~~~~~~~~~l~v~~----~~~~a~~~ga~gv--hl~~~---~ 388 (514)
.+.++.+++.|++.|.+-..... + ....+.++.+++.+. +..+++.- ....+.+.|+|.+ ++... .
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~--~~~v~~~~~t~~ea~~a~~~Gad~i~~~v~g~~~~~ 168 (234)
T 1yxy_A 91 MTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYP--NQLLMADISTFDEGLVAHQAGIDFVGTTLSGYTPYS 168 (234)
T ss_dssp HHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCT--TCEEEEECSSHHHHHHHHHTTCSEEECTTTTSSTTS
T ss_pred HHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCC--CCeEEEeCCCHHHHHHHHHcCCCEEeeeccccCCCC
Confidence 45688899999999988443211 1 122344444444331 55565532 2455678999999 44321 1
Q ss_pred -----CCHHHHHhhc--CCCcEEEEecCCHHHHHHhhhCCCcEEEeccccC
Q 010240 389 -----MPARTARALL--GPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYP 432 (514)
Q Consensus 389 -----~~~~~~~~~~--~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~ 432 (514)
.....+++.. ....+..-...|++.+.++.+.|+|.+.+|..+-
T Consensus 169 ~~~~~~~~~~i~~~~~~~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~ 219 (234)
T 1yxy_A 169 RQEAGPDVALIEALCKAGIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAIT 219 (234)
T ss_dssp CCSSSCCHHHHHHHHHTTCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHH
T ss_pred cCCCCCCHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHh
Confidence 1122233222 2333444456679999999999999999987543
No 339
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=87.32 E-value=2.4 Score=38.88 Aligned_cols=125 Identities=13% Similarity=0.098 Sum_probs=74.4
Q ss_pred cHHHHHhCCCCeEEeCCCC------CCHH----HHHhhcCCCcEEEEecCCHHHHHHhh-------------hC----CC
Q 010240 370 RIDIALACDADGVHLGQSD------MPAR----TARALLGPDKIIGVSCKTPEEAHQAW-------------ID----GA 422 (514)
Q Consensus 370 ~~~~a~~~ga~gvhl~~~~------~~~~----~~~~~~~~~~~ig~s~~~~~e~~~a~-------------~~----g~ 422 (514)
.+....++|+.+|-++.+. .... +.+..+..++.+.+-+....|-+++. .. .-
T Consensus 73 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~~~t~~vv~~Ql~~l~~~~~~ 152 (233)
T 2jgq_A 73 TSKHLEELKIHTLLIGHSERRTLLKESPSFLKEKFDFFKSKNFKIVYCIGEELTTREKGFKAVKEFLSEQLENIDLNYPN 152 (233)
T ss_dssp BHHHHHHTTCCEEEECCHHHHHTTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHCHHHHHHHHHHHHTTSCTTCTT
T ss_pred CHHHHHHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCchhHHHHHHHHHHhhhhhccc
Confidence 3556666666666665432 1111 34445556777776666433333331 12 24
Q ss_pred cEEEeccccCCCCCCCCccCCHHHHHHH----HHcC--CCCEEEECCCCcccHHHHHHCCCCCCceEEEeecccCCCCHH
Q 010240 423 NYIGCGGVYPTNTKANNLTVGLDGLKTV----CLAS--KLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSALFDRECIL 496 (514)
Q Consensus 423 d~v~~~~vf~t~~k~~~~~~g~~~l~~~----~~~~--~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~~~~~~~ 496 (514)
.+|..=|+..-.|...+ ..+.++++ ++.+ .++|+=-|+++++|+.+++..- +|||+-+|++-++++++.
T Consensus 153 ~vIAYEPvWAIGTG~~A---t~e~a~ev~~~IR~~l~~~vrIlYGGSV~~~N~~~l~~~~--diDG~LVGgAsl~a~~f~ 227 (233)
T 2jgq_A 153 LVVAYEPIWAIGTKKSA---SLEDIYLTHGFLKQILNQKTPLLYGGSVNTQNAKEILGID--SVDGLLIGSASWELENFK 227 (233)
T ss_dssp EEEEECCGGGTTC--CC---CHHHHHHHHHHHHHHSCTTSCEEEESSCCTTTHHHHHTST--TCCEEEESGGGGSHHHHH
T ss_pred eEEEEeCHHHhCCCCCC---CHHHHHHHHHHHHHHHhcCCcEEEcCCcChhhHHHHhcCC--CCCeeEecHHHhChHHHH
Confidence 56777787765543222 34444433 3333 5899999999999999988642 444999999999776665
Q ss_pred HHH
Q 010240 497 PES 499 (514)
Q Consensus 497 ~~~ 499 (514)
+.+
T Consensus 228 ~ii 230 (233)
T 2jgq_A 228 TII 230 (233)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 340
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=87.19 E-value=0.36 Score=43.62 Aligned_cols=159 Identities=15% Similarity=0.076 Sum_probs=90.2
Q ss_pred CCHHHHHHHHHh--CCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHHHHH
Q 010240 318 RSITDAVKAALE--GGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPARTAR 395 (514)
Q Consensus 318 ~~~~~~~~~~~~--~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~~~~ 395 (514)
.++.+.+.+.++ .|--.+|+ -..+.++..+.++++..+.. ++-+=|.-..+- ...++
T Consensus 38 ~~~~~~~~eI~~~v~G~Vs~EV--~a~d~e~mi~ea~~l~~~~~--nv~IKIP~T~eG-----------------l~A~~ 96 (212)
T 3r8r_A 38 VSFHDRLREITDVVKGSVSAEV--ISLKAEEMIEEGKELAKIAP--NITVKIPMTSDG-----------------LKAVR 96 (212)
T ss_dssp SCHHHHHHHHHHHCCSCEEEEC--CCSSHHHHHHHHHHHHTTCT--TEEEEEESSHHH-----------------HHHHH
T ss_pred CCHHHHHHHHHHhcCCCEEEEE--ecCCHHHHHHHHHHHHHhCC--CEEEEeCCCHHH-----------------HHHHH
Confidence 345566655554 34334454 56677777777777665432 222223332221 11111
Q ss_pred hhcCCCc-EEEEecCCHHHHHHhhhCCCcEEEe--ccccCCCCCCCCccCCHHHHHHHHHc-----CCCCEEEECCCCcc
Q 010240 396 ALLGPDK-IIGVSCKTPEEAHQAWIDGANYIGC--GGVYPTNTKANNLTVGLDGLKTVCLA-----SKLPVVAIGGIGIS 467 (514)
Q Consensus 396 ~~~~~~~-~ig~s~~~~~e~~~a~~~g~d~v~~--~~vf~t~~k~~~~~~g~~~l~~~~~~-----~~~pv~a~GGi~~~ 467 (514)
.....+. .-..-+.|+.++..|.+.|++||.. |-+... ..-|.+.++++.+. .+..|++..=-++.
T Consensus 97 ~L~~~GI~vn~TlifS~~Qa~~Aa~AGa~yISPfvgRi~d~------~~dG~~~v~~i~~~~~~~~~~t~ilaAS~R~~~ 170 (212)
T 3r8r_A 97 ALTDLGIKTNVTLIFNANQALLAARAGATYVSPFLGRLDDI------GHNGLDLISEVKQIFDIHGLDTQIIAASIRHPQ 170 (212)
T ss_dssp HHHHTTCCEEEEEECSHHHHHHHHHHTCSEEEEBHHHHHHT------TSCHHHHHHHHHHHHHHHTCCCEEEEBSCCSHH
T ss_pred HHHHCCCcEEEEEeCCHHHHHHHHHcCCeEEEeccchhhhc------CCChHHHHHHHHHHHHHcCCCCEEEEecCCCHH
Confidence 1111222 2234567999999999999999822 222221 12356666666553 35667777666788
Q ss_pred cHHHHHHCCCCCCceEEEeeccc----CCCCHHHHHHHHHHHH
Q 010240 468 NASDVMKIGVSNLKGVAVVSALF----DRECILPESKKLHAVL 506 (514)
Q Consensus 468 ~~~~~~~~Ga~~~~gva~~~~i~----~~~~~~~~~~~~~~~~ 506 (514)
++.++..+|++ .+-+.-.++ +.+-..+.++.|.+-|
T Consensus 171 ~v~~~a~~G~d---~~Tip~~vl~~l~~hpltd~~~~~F~~Dw 210 (212)
T 3r8r_A 171 HVTEAALRGAH---IGTMPLKVIHALTKHPLTDKGIEQFLADW 210 (212)
T ss_dssp HHHHHHHTTCS---EEEECHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCC---EEEcCHHHHHHHHcCCcHHHHHHHHHHHh
Confidence 88888899999 887766555 2222345566666655
No 341
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=87.08 E-value=2.8 Score=39.13 Aligned_cols=149 Identities=17% Similarity=0.165 Sum_probs=78.9
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCC----HHHHHHHHHHHHHHHhhcCceEEEc------------C----c---HHHH
Q 010240 318 RSITDAVKAALEGGATIIQLREKDAD----TRGFLEAAKACLQICCVHGVPLLIN------------D----R---IDIA 374 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~----~~~~~~~~~~~~~~~~~~~~~l~v~------------~----~---~~~a 374 (514)
++..+.++.+++.|+++|++|..... .+...+.+..++.... +.++++. . + ++.+
T Consensus 32 ~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~--~~PiI~T~Rt~~eGG~~~~~~~~~~~~ll~~~ 109 (257)
T 2yr1_A 32 RKVLREAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAG--EIPILFTIRSEREGGQPIPLNEAEVRRLIEAI 109 (257)
T ss_dssp HHHHHHHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSS--SCCEEEECCCTTTTCCCCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhcc--CCCEEEEEeecccCCCCCCCCHHHHHHHHHHH
Confidence 45667777788899999999997553 2333334444443321 4566641 1 1 2345
Q ss_pred HhCC-CCeEEeCCCCCC-HHH-HHhhcCCCcEEEEecC----CH--HH----HHHhhhCCCcEEEeccccCCCCCCCCcc
Q 010240 375 LACD-ADGVHLGQSDMP-ART-ARALLGPDKIIGVSCK----TP--EE----AHQAWIDGANYIGCGGVYPTNTKANNLT 441 (514)
Q Consensus 375 ~~~g-a~gvhl~~~~~~-~~~-~~~~~~~~~~ig~s~~----~~--~e----~~~a~~~g~d~v~~~~vf~t~~k~~~~~ 441 (514)
.+.| ++.|-+.-.... ... .+.....+..+..|.| |+ +| ..++.+.|||++ ++--+.... ...
T Consensus 110 ~~~g~~d~iDvEl~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~gaDiv---Kia~~a~s~-~D~ 185 (257)
T 2yr1_A 110 CRSGAIDLVDYELAYGERIADVRRMTEECSVWLVVSRHYFDGTPRKETLLADMRQAERYGADIA---KVAVMPKSP-EDV 185 (257)
T ss_dssp HHHTCCSEEEEEGGGTTHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEE---EEEECCSSH-HHH
T ss_pred HHcCCCCEEEEECCCChhHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHHHHHHhcCCCEE---EEEeccCCH-HHH
Confidence 6677 888876543222 111 2212234556667888 34 45 345678999999 554432211 111
Q ss_pred CCH-HHHHHHHHcCCCCEEEE--CCCCcccHHHHHH
Q 010240 442 VGL-DGLKTVCLASKLPVVAI--GGIGISNASDVMK 474 (514)
Q Consensus 442 ~g~-~~l~~~~~~~~~pv~a~--GGi~~~~~~~~~~ 474 (514)
+.+ ....++....+.|++++ |... .+..++.
T Consensus 186 l~ll~~~~~~~~~~~~P~I~~~MG~~G--~~SRi~~ 219 (257)
T 2yr1_A 186 LVLLQATEEARRELAIPLITMAMGGLG--AITRLAG 219 (257)
T ss_dssp HHHHHHHHHHHHHCSSCEEEEECTTTT--HHHHHHG
T ss_pred HHHHHHHHHHhccCCCCEEEEECCCCc--chHHHHH
Confidence 111 11122222347898877 5443 3444444
No 342
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=87.00 E-value=1.9 Score=39.38 Aligned_cols=95 Identities=14% Similarity=0.137 Sum_probs=61.8
Q ss_pred HHHhCCCCeEEeCCCCCC----HHHHHhhcCCCcEEEEec-CCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHH
Q 010240 373 IALACDADGVHLGQSDMP----ARTARALLGPDKIIGVSC-KTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGL 447 (514)
Q Consensus 373 ~a~~~ga~gvhl~~~~~~----~~~~~~~~~~~~~ig~s~-~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l 447 (514)
.+.+.|++.+-++..... ...+++.+ ++..+|+.+ .+.+++..|.+.|+|++..+. ...+ +
T Consensus 46 al~~gGv~~iel~~k~~~~~~~i~~l~~~~-~~~~igagtvl~~d~~~~A~~aGAd~v~~p~------------~d~~-v 111 (225)
T 1mxs_A 46 ALAAGGIRTLEVTLRSQHGLKAIQVLREQR-PELCVGAGTVLDRSMFAAVEAAGAQFVVTPG------------ITED-I 111 (225)
T ss_dssp HHHHTTCCEEEEESSSTHHHHHHHHHHHHC-TTSEEEEECCCSHHHHHHHHHHTCSSEECSS------------CCHH-H
T ss_pred HHHHCCCCEEEEecCCccHHHHHHHHHHhC-cccEEeeCeEeeHHHHHHHHHCCCCEEEeCC------------CCHH-H
Confidence 334556666666554432 12234444 477887644 588999999999999995321 1233 3
Q ss_pred HHHHHcCCCCEEEECCCCcccHHHHHHCCCCCCceEEE
Q 010240 448 KTVCLASKLPVVAIGGIGISNASDVMKIGVSNLKGVAV 485 (514)
Q Consensus 448 ~~~~~~~~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~ 485 (514)
.+.++..++|+++ |=-|++.+..+.+.|++ .|.+
T Consensus 112 ~~~~~~~g~~~i~-G~~t~~e~~~A~~~Gad---~vk~ 145 (225)
T 1mxs_A 112 LEAGVDSEIPLLP-GISTPSEIMMGYALGYR---RFKL 145 (225)
T ss_dssp HHHHHHCSSCEEC-EECSHHHHHHHHTTTCC---EEEE
T ss_pred HHHHHHhCCCEEE-eeCCHHHHHHHHHCCCC---EEEE
Confidence 3444456788775 54468888899999999 8877
No 343
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=86.69 E-value=0.76 Score=45.36 Aligned_cols=122 Identities=12% Similarity=0.099 Sum_probs=66.2
Q ss_pred HHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHHHHHhhcCCCcEEEEe--c-CCHHHHHHhh-hCCCcEEEe
Q 010240 352 KACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPARTARALLGPDKIIGVS--C-KTPEEAHQAW-IDGANYIGC 427 (514)
Q Consensus 352 ~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~~~~~~~~~~~~ig~s--~-~~~~e~~~a~-~~g~d~v~~ 427 (514)
+.+.+.|++.|+...+.+.. .+.+-. ......+++.. ++..+.++ + ++.+++.++. ..|+|.+.+
T Consensus 106 ~~lA~~a~~~G~~~~vGs~~-~~le~~---------~~~~~~v~r~~-P~~~~ianig~~~~~e~~~~~ve~~~adal~i 174 (365)
T 3sr7_A 106 EKLAQVADTCGLLFVTGSYS-TALKNP---------DDTSYQVKKSR-PHLLLATNIGLDKPYQAGLQAVRDLQPLFLQV 174 (365)
T ss_dssp HHHHHHHHHHTCCEEC----------------------------------CCEEEEEETTSCHHHHHHHHHHHCCSCEEE
T ss_pred HHHHHHHHHcCCCeeccccc-ccccCc---------cccceEehhhC-CCCcEEEEeCCCCCHHHHHHHHHhcCCCEEEE
Confidence 34566788888887775532 111110 00011122222 33333333 3 3577766655 789999877
Q ss_pred ccccCC--CCCCCCccC-CH-HHHHHHHHcCCCCEEEECC---CCcccHHHHHHCCCCCCceEEEee
Q 010240 428 GGVYPT--NTKANNLTV-GL-DGLKTVCLASKLPVVAIGG---IGISNASDVMKIGVSNLKGVAVVS 487 (514)
Q Consensus 428 ~~vf~t--~~k~~~~~~-g~-~~l~~~~~~~~~pv~a~GG---i~~~~~~~~~~~Ga~~~~gva~~~ 487 (514)
.--+.. ...++.... +| +.++++++..++||++=|= .+++.+..+.++|++ +|.+.+
T Consensus 175 hln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~vg~g~s~e~A~~l~~aGad---~I~V~g 238 (365)
T 3sr7_A 175 HINLMQELLMPEGEREFRSWKKHLSDYAKKLQLPFILKEVGFGMDVKTIQTAIDLGVK---TVDISG 238 (365)
T ss_dssp EECHHHHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEECSSCCCHHHHHHHHHHTCC---EEECCC
T ss_pred eccccccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEECCCCCCHHHHHHHHHcCCC---EEEEeC
Confidence 422211 111122212 45 7899999988999998852 578999999999999 998843
No 344
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=86.52 E-value=1.4 Score=40.98 Aligned_cols=129 Identities=16% Similarity=0.073 Sum_probs=77.9
Q ss_pred cHHHHHhCCCCeEEeCCCCC------C----HHHHHhhcCCCcEEEEecCC-HHH-------------HHHhh----hCC
Q 010240 370 RIDIALACDADGVHLGQSDM------P----ARTARALLGPDKIIGVSCKT-PEE-------------AHQAW----IDG 421 (514)
Q Consensus 370 ~~~~a~~~ga~gvhl~~~~~------~----~~~~~~~~~~~~~ig~s~~~-~~e-------------~~~a~----~~g 421 (514)
.+....++|+++|-++.+.. . ..+++..+..++.+.+-+.. .+| +..+. ...
T Consensus 78 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pIvCvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~ 157 (259)
T 2i9e_A 78 SPAMIKDVGADWVILGHSERRQIFGESDELIAEKVCHALESGLKVIACIGETLEEREAGKTEEVVFRQTKAIAAKVNDWS 157 (259)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHCSCCT
T ss_pred CHHHHHHcCCCEEEECchhhhhhcCCCHHHHHHHHHHHHHCCCeEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcchhhc
Confidence 46677788888887765321 1 12333445567777766664 332 33333 334
Q ss_pred CcEEEeccccCCCCCCCCccCCH----HHHHHHHH-cC------CCCEEEECCCCcccHHHHHHCCCCCCceEEEeeccc
Q 010240 422 ANYIGCGGVYPTNTKANNLTVGL----DGLKTVCL-AS------KLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 422 ~d~v~~~~vf~t~~k~~~~~~g~----~~l~~~~~-~~------~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~ 490 (514)
-.+|.+=|+..-.|...+++-.. ..++.+.. .+ .++|+=-|+++++|+.+++..- +|||+-+|++-+
T Consensus 158 ~~vIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~N~~~l~~~~--diDG~LVGgAsL 235 (259)
T 2i9e_A 158 NVVIAYEPVWAIGTGKTATPQQAQDVHKALRQWICENIDAKVGNSIRIQYGGSVTAANCKELASQP--DIDGFLVGGASL 235 (259)
T ss_dssp TEEEEECCGGGTTSSSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEECSCCCTTTHHHHHTST--TCCEEEESGGGG
T ss_pred CEEEEEcCHHHcCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCHhhHHHHhcCC--CCCeeeechHhh
Confidence 55777778887554333322111 22332221 11 4889999999999999988742 444999999999
Q ss_pred CCCCHHHHHH
Q 010240 491 DRECILPESK 500 (514)
Q Consensus 491 ~~~~~~~~~~ 500 (514)
+++++.+.++
T Consensus 236 ~a~~F~~Ii~ 245 (259)
T 2i9e_A 236 KPEFVDIINA 245 (259)
T ss_dssp STHHHHHHTT
T ss_pred ChHHHHHHHH
Confidence 8877766654
No 345
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=86.51 E-value=1.7 Score=41.52 Aligned_cols=75 Identities=19% Similarity=0.114 Sum_probs=55.1
Q ss_pred EecCCHHHHHHhhhCCCcEEEeccccCCCCC--CC-CccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCc
Q 010240 406 VSCKTPEEAHQAWIDGANYIGCGGVYPTNTK--AN-NLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLK 481 (514)
Q Consensus 406 ~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k--~~-~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~ 481 (514)
....+++.++.+.+.|||-+.+=.=-+|+-+ .+ .....++.++++++.+.+||++.+++. .+.++.+.++||+
T Consensus 26 ~d~~~~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v~iPvl~k~~i~~ide~qil~aaGAD--- 102 (297)
T 4adt_A 26 MDVKNVEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCISINVLAKVRIGHFVEAQILEELKVD--- 102 (297)
T ss_dssp EEESSHHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTCCSEEEEEEETTCHHHHHHHHHTTCS---
T ss_pred cCCCcHHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhcCCCEEEeccCCcHHHHHHHHHcCCC---
Confidence 4678899999999999999854321111111 11 122368999999999999999998887 6778888899999
Q ss_pred eE
Q 010240 482 GV 483 (514)
Q Consensus 482 gv 483 (514)
.|
T Consensus 103 ~I 104 (297)
T 4adt_A 103 ML 104 (297)
T ss_dssp EE
T ss_pred EE
Confidence 88
No 346
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=86.48 E-value=1.3 Score=44.33 Aligned_cols=72 Identities=24% Similarity=0.183 Sum_probs=47.6
Q ss_pred HHHHHHhhhCCCcEEEeccccCC-CCCCCCccCCHHHHHHHHHcCCCCEEEECCCCcccHHHHHHCCCCCCceEEEee
Q 010240 411 PEEAHQAWIDGANYIGCGGVYPT-NTKANNLTVGLDGLKTVCLASKLPVVAIGGIGISNASDVMKIGVSNLKGVAVVS 487 (514)
Q Consensus 411 ~~e~~~a~~~g~d~v~~~~vf~t-~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~ 487 (514)
.+.+..+.+.|+|++.+.. .+. .... .+...|+.+.++++..++||++=|..+++.+..+.++|++ +|.++.
T Consensus 168 ~e~a~~~~~agad~i~i~~-~~~~~~~~-~~~~~~~~i~~l~~~~~~pvi~ggi~t~e~a~~~~~~Gad---~i~vg~ 240 (393)
T 2qr6_A 168 REIAPIVIKAGADLLVIQG-TLISAEHV-NTGGEALNLKEFIGSLDVPVIAGGVNDYTTALHMMRTGAV---GIIVGG 240 (393)
T ss_dssp HHHHHHHHHTTCSEEEEEC-SSCCSSCC-CC-----CHHHHHHHCSSCEEEECCCSHHHHHHHHTTTCS---EEEESC
T ss_pred HHHHHHHHHCCCCEEEEeC-CccccccC-CCcccHHHHHHHHHhcCCCEEECCcCCHHHHHHHHHcCCC---EEEECC
Confidence 3345556688999997631 110 0010 1112566788888888999999555679999999999999 999965
No 347
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=86.36 E-value=1.8 Score=41.63 Aligned_cols=111 Identities=16% Similarity=0.041 Sum_probs=66.7
Q ss_pred CCHHHHHHHHHhCCCC-EEEEEcCCC----------CHHHHHHHHHHHHHHHhhcCceEEE--cC--c-------HHHHH
Q 010240 318 RSITDAVKAALEGGAT-IIQLREKDA----------DTRGFLEAAKACLQICCVHGVPLLI--ND--R-------IDIAL 375 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~-~v~lr~~~~----------~~~~~~~~~~~~~~~~~~~~~~l~v--~~--~-------~~~a~ 375 (514)
+++.+.++.+.+.|++ .|++-...+ +.+...+.++.++ +..+.++++ .. + .+.+.
T Consensus 106 ~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr---~~~~~Pv~vKi~~~~~~~~~~~~a~~~~ 182 (311)
T 1jub_A 106 AENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVF---TFFTKPLGVKLPPYFDLVHFDIMAEILN 182 (311)
T ss_dssp HHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHT---TTCCSCEEEEECCCCSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHH---HhcCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 4677888888889999 999965321 3333334444333 333667765 11 1 34556
Q ss_pred hCCCCeEEeCCCC-------------------------CC------HH---HHHhhc--CCCcEEEEecCCHHHHHHhhh
Q 010240 376 ACDADGVHLGQSD-------------------------MP------AR---TARALL--GPDKIIGVSCKTPEEAHQAWI 419 (514)
Q Consensus 376 ~~ga~gvhl~~~~-------------------------~~------~~---~~~~~~--~~~~~ig~s~~~~~e~~~a~~ 419 (514)
+.|+|++++.... .+ .. .+++.. ....+..-..+|.+++.++..
T Consensus 183 ~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~ 262 (311)
T 1jub_A 183 QFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLL 262 (311)
T ss_dssp TSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHH
T ss_pred HcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHH
Confidence 7799998775431 00 11 222333 122233334569999999999
Q ss_pred CCCcEEEecccc
Q 010240 420 DGANYIGCGGVY 431 (514)
Q Consensus 420 ~g~d~v~~~~vf 431 (514)
.|||.|.+|.-+
T Consensus 263 ~GAd~V~vg~~~ 274 (311)
T 1jub_A 263 CGATMLQIGTAL 274 (311)
T ss_dssp HTCSEEEECHHH
T ss_pred cCCCEEEEchHH
Confidence 999999998644
No 348
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=86.33 E-value=7.5 Score=37.81 Aligned_cols=73 Identities=11% Similarity=-0.121 Sum_probs=46.6
Q ss_pred HHHhCCCCeEEeCCCC-----------CC---HHHHHhhcCCCcEEEEecCCHHHHHHhhhCC-CcEEEeccccCCCCCC
Q 010240 373 IALACDADGVHLGQSD-----------MP---ARTARALLGPDKIIGVSCKTPEEAHQAWIDG-ANYIGCGGVYPTNTKA 437 (514)
Q Consensus 373 ~a~~~ga~gvhl~~~~-----------~~---~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g-~d~v~~~~vf~t~~k~ 437 (514)
...+.|+|.+|+.... .. ...+++......+..-..+|++++.++.+.| +|.|.+|-.+-
T Consensus 237 ~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~l----- 311 (340)
T 3gr7_A 237 RMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLVFLGRELL----- 311 (340)
T ss_dssp HHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHH-----
T ss_pred HHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHH-----
Confidence 3456799999985321 01 2234554444444444557999999999999 99999986543
Q ss_pred CCccCCHHHHHHHHHcC
Q 010240 438 NNLTVGLDGLKTVCLAS 454 (514)
Q Consensus 438 ~~~~~g~~~l~~~~~~~ 454 (514)
..++.++++++.+
T Consensus 312 ----anPdl~~ki~~~l 324 (340)
T 3gr7_A 312 ----RNPYWPYAAAREL 324 (340)
T ss_dssp ----HCTTHHHHHHHHT
T ss_pred ----hCchHHHHHHHHC
Confidence 1345566666654
No 349
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=86.20 E-value=4.8 Score=39.37 Aligned_cols=110 Identities=13% Similarity=0.064 Sum_probs=67.3
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCC---------------HHHHHHHHHHHHHHHhhcCceEEE--c---C-------c
Q 010240 318 RSITDAVKAALEGGATIIQLREKDAD---------------TRGFLEAAKACLQICCVHGVPLLI--N---D-------R 370 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~---------------~~~~~~~~~~~~~~~~~~~~~l~v--~---~-------~ 370 (514)
+.+.+.++.+.+.|.+.|.|-.-.+. ++...+.++.+++ ..+.++.+ . + .
T Consensus 70 ~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~---~v~~PV~vKiR~g~~~~~~~~~~ 146 (350)
T 3b0p_A 70 KSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGE---AVRVPVTVKMRLGLEGKETYRGL 146 (350)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHH---HCSSCEEEEEESCBTTCCCHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHH---HhCCceEEEEecCcCccccHHHH
Confidence 45777777888899999999764332 2223334444433 33667766 1 1 1
Q ss_pred ---HHHHHhCCCCeEEeCCCC---------------CCH---HHHHhhc-CCCcEEEEecCCHHHHHHhhhCCCcEEEec
Q 010240 371 ---IDIALACDADGVHLGQSD---------------MPA---RTARALL-GPDKIIGVSCKTPEEAHQAWIDGANYIGCG 428 (514)
Q Consensus 371 ---~~~a~~~ga~gvhl~~~~---------------~~~---~~~~~~~-~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~ 428 (514)
.+.+.+.|++++|+.... ... ..+++.. ....+..-...|++++.++.+ |+|.|.+|
T Consensus 147 ~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-GaD~V~iG 225 (350)
T 3b0p_A 147 AQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RVDGVMLG 225 (350)
T ss_dssp HHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TSSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CCCEEEEC
Confidence 245568899999875421 111 2334443 223333344569999999998 99999997
Q ss_pred ccc
Q 010240 429 GVY 431 (514)
Q Consensus 429 ~vf 431 (514)
.-+
T Consensus 226 Ra~ 228 (350)
T 3b0p_A 226 RAV 228 (350)
T ss_dssp HHH
T ss_pred HHH
Confidence 533
No 350
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=86.08 E-value=3.6 Score=39.33 Aligned_cols=50 Identities=14% Similarity=0.179 Sum_probs=33.9
Q ss_pred CCHHHHHHHHHhCCCCEEEEEc-----CCCCHHHHHHHHHHHHHHHhhcCceEEE
Q 010240 318 RSITDAVKAALEGGATIIQLRE-----KDADTRGFLEAAKACLQICCVHGVPLLI 367 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~v 367 (514)
+.+.+.++.+++.|++.+.+-- ..++.+|..++++...+.+...++++++
T Consensus 28 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia 82 (301)
T 3m5v_A 28 QSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLA 82 (301)
T ss_dssp HHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 5577888889999999988733 3556777777777666555332455554
No 351
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=85.98 E-value=9.8 Score=36.86 Aligned_cols=187 Identities=13% Similarity=0.157 Sum_probs=112.7
Q ss_pred CceEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcC--cHH---HHH
Q 010240 301 DLFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLIND--RID---IAL 375 (514)
Q Consensus 301 ~~~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~--~~~---~a~ 375 (514)
++.+.-.|+.+... .+...+.+.++.++|.++|.+..++ .++ ++.+..+.++..++|+..- +++ .|.
T Consensus 31 Pi~VQSMtnt~T~D--~~atv~Qi~~l~~aG~diVRvavp~--~~~----a~al~~I~~~~~vPlvaDiHf~~~lal~a~ 102 (366)
T 3noy_A 31 PIVVQSMTSTKTHD--VEATLNQIKRLYEAGCEIVRVAVPH--KED----VEALEEIVKKSPMPVIADIHFAPSYAFLSM 102 (366)
T ss_dssp CCEEEEECCSCTTC--HHHHHHHHHHHHHTTCCEEEEECCS--HHH----HHHHHHHHHHCSSCEEEECCSCHHHHHHHH
T ss_pred cEEEEEecCCCCcC--HHHHHHHHHHHHHcCCCEEEeCCCC--hHH----HHHHHHHHhcCCCCEEEeCCCCHHHHHHHH
Confidence 45666666554332 3567778888999999999988765 222 3456666667788988642 344 346
Q ss_pred hCCCCeEEeCCCCC-------CHHHHHhhcCCCcEEEEecC-------------CHH--------HHHHhhhCCCcEEEe
Q 010240 376 ACDADGVHLGQSDM-------PARTARALLGPDKIIGVSCK-------------TPE--------EAHQAWIDGANYIGC 427 (514)
Q Consensus 376 ~~ga~gvhl~~~~~-------~~~~~~~~~~~~~~ig~s~~-------------~~~--------e~~~a~~~g~d~v~~ 427 (514)
+.|+|.+-+...+. .+....+..+....||+... +++ .++.+.+.|.|-+.+
T Consensus 103 e~G~dklRINPGNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~gf~~ivi 182 (366)
T 3noy_A 103 EKGVHGIRINPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWGFTNYKV 182 (366)
T ss_dssp HTTCSEEEECHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred HhCCCeEEECCcccCchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 78999988866554 23334444566778885543 222 245566788877766
Q ss_pred ccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCc-cc-----------HHHHHHCCCCCCceEEEeecccCCCCH
Q 010240 428 GGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGI-SN-----------ASDVMKIGVSNLKGVAVVSALFDRECI 495 (514)
Q Consensus 428 ~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~-~~-----------~~~~~~~Ga~~~~gva~~~~i~~~~~~ 495 (514)
|. |......-++..+.+++.++.|+. +| +|. .. +..++.-|.- |.+-+ --.++|
T Consensus 183 S~------K~S~v~~~i~ayr~la~~~dyPLH-lG-vTEAG~~~~G~ikSsigiG~LL~dGIG--DTIRV----SLt~~p 248 (366)
T 3noy_A 183 SI------KGSDVLQNVRANLIFAERTDVPLH-IG-ITEAGMGTKGIIKSSVGIGILLYMGIG--DTVRV----SLTDDP 248 (366)
T ss_dssp EE------ECSSHHHHHHHHHHHHHHCCCCEE-EC-CSSCCSHHHHHHHHHHHHHHHHHTTCC--SEECC----CCSSCH
T ss_pred ee------ecCChHHHHHHHHHHHhccCCCEE-Ec-cCCCCCCcceeeehHHHHHHHHHhccc--ceEEE----eCCCCc
Confidence 53 111112245677788888899986 44 442 22 2344444432 13322 234688
Q ss_pred HHHHHHHHHHHHHH
Q 010240 496 LPESKKLHAVLMDA 509 (514)
Q Consensus 496 ~~~~~~~~~~~~~~ 509 (514)
.+.++.-.++++..
T Consensus 249 ~~Ev~va~~ILqsl 262 (366)
T 3noy_A 249 VVEVETAYEILKSL 262 (366)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 87777666666654
No 352
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=85.15 E-value=4.6 Score=36.70 Aligned_cols=84 Identities=17% Similarity=0.140 Sum_probs=57.2
Q ss_pred HHHHHHhhhCCCcEEEec----cccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCc--ccHHHHHHCCCCCCceEE
Q 010240 411 PEEAHQAWIDGANYIGCG----GVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGI--SNASDVMKIGVSNLKGVA 484 (514)
Q Consensus 411 ~~e~~~a~~~g~d~v~~~----~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~--~~~~~~~~~Ga~~~~gva 484 (514)
.+++..+.+.|+|++-++ ++++. . ..|++.++++++.++.|+.+.-=++. +.+..+.++|++ +|.
T Consensus 26 ~~~i~~~~~~G~d~i~l~~~dg~f~~~-----~-~~~~~~i~~l~~~~~~~~~v~l~vnd~~~~v~~~~~~Gad---~v~ 96 (230)
T 1rpx_A 26 GEQVKAIEQAGCDWIHVDVMDGRFVPN-----I-TIGPLVVDSLRPITDLPLDVHLMIVEPDQRVPDFIKAGAD---IVS 96 (230)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSC-----B-CCCHHHHHHHGGGCCSCEEEEEESSSHHHHHHHHHHTTCS---EEE
T ss_pred HHHHHHHHHCCCCEEEEeeccCCcccc-----c-ccCHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCC---EEE
Confidence 445777778999999774 44442 1 25789999998877778766655664 357889999999 998
Q ss_pred EeecccCCCCHHHHHHHHH
Q 010240 485 VVSALFDRECILPESKKLH 503 (514)
Q Consensus 485 ~~~~i~~~~~~~~~~~~~~ 503 (514)
+.......+++.+.++.++
T Consensus 97 vh~~~~~~~~~~~~~~~~~ 115 (230)
T 1rpx_A 97 VHCEQSSTIHLHRTINQIK 115 (230)
T ss_dssp EECSTTTCSCHHHHHHHHH
T ss_pred EEecCccchhHHHHHHHHH
Confidence 7754222345555555554
No 353
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=85.11 E-value=26 Score=33.10 Aligned_cols=147 Identities=14% Similarity=0.047 Sum_probs=83.6
Q ss_pred hCCCCEEEEEc---------CCCCHHHHHHHHHHHHHHHhhcCceEEEcC------------cHHHHHhCCCCeEEeCCC
Q 010240 329 EGGATIIQLRE---------KDADTRGFLEAAKACLQICCVHGVPLLIND------------RIDIALACDADGVHLGQS 387 (514)
Q Consensus 329 ~~Gv~~v~lr~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~------------~~~~a~~~ga~gvhl~~~ 387 (514)
+.|++.+.+-. ++...-.+.+.+..++.+++..+.++++.- .+....+.|+.|||+...
T Consensus 33 ~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~ 112 (290)
T 2hjp_A 33 QAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTGFGNAVNVHYVVPQYEAAGASAIVMEDK 112 (290)
T ss_dssp HHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTTTSSHHHHHHHHHHHHHHTCSEEEEECB
T ss_pred HcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCC
Confidence 45777777653 111111223444445555666677876521 133345679999998654
Q ss_pred CC---------------CHH----HHH---hh--cCCCcEEEEecCC-----HHH----HHHhhhCCCcEEEecc-ccCC
Q 010240 388 DM---------------PAR----TAR---AL--LGPDKIIGVSCKT-----PEE----AHQAWIDGANYIGCGG-VYPT 433 (514)
Q Consensus 388 ~~---------------~~~----~~~---~~--~~~~~~ig~s~~~-----~~e----~~~a~~~g~d~v~~~~-vf~t 433 (514)
.. +.. .++ .. .+.-.+++.+-.. .++ ++...++|||.|++=. +
T Consensus 113 ~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~--- 189 (290)
T 2hjp_A 113 TFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQEAVRRGQAYEEAGADAILIHSRQ--- 189 (290)
T ss_dssp CSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCC---
T ss_pred CCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHHHHHHHHHHHHHcCCcEEEeCCCC---
Confidence 31 111 111 11 1223344543222 354 4456688999996621 1
Q ss_pred CCCCCCccCCHHHHHHHHHcCC--CCEEEEC--CCCcccHHHHHHCC-CCCCceEEEeeccc
Q 010240 434 NTKANNLTVGLDGLKTVCLASK--LPVVAIG--GIGISNASDVMKIG-VSNLKGVAVVSALF 490 (514)
Q Consensus 434 ~~k~~~~~~g~~~l~~~~~~~~--~pv~a~G--Gi~~~~~~~~~~~G-a~~~~gva~~~~i~ 490 (514)
...+.++++++.++ +|+++-- + ..-+..++.++| +. -|..+...+
T Consensus 190 --------~~~~~~~~i~~~~~~~vP~i~n~~~~-~~~~~~eL~~lG~v~---~v~~~~~~~ 239 (290)
T 2hjp_A 190 --------KTPDEILAFVKSWPGKVPLVLVPTAY-PQLTEADIAALSKVG---IVIYGNHAI 239 (290)
T ss_dssp --------SSSHHHHHHHHHCCCSSCEEECGGGC-TTSCHHHHHTCTTEE---EEEECSHHH
T ss_pred --------CCHHHHHHHHHHcCCCCCEEEeccCC-CCCCHHHHHhcCCee---EEEechHHH
Confidence 13567788888887 9998731 1 123578999999 88 888887766
No 354
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=85.11 E-value=5.3 Score=36.33 Aligned_cols=108 Identities=15% Similarity=0.142 Sum_probs=63.0
Q ss_pred HHHHHHHhCCCCEEEEEcC-----CCCHHHHHHHHHHHHHHHhhcCceEEEc----Cc------HHHHHhCCCCeEEeCC
Q 010240 322 DAVKAALEGGATIIQLREK-----DADTRGFLEAAKACLQICCVHGVPLLIN----DR------IDIALACDADGVHLGQ 386 (514)
Q Consensus 322 ~~~~~~~~~Gv~~v~lr~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~v~----~~------~~~a~~~ga~gvhl~~ 386 (514)
..++.+++.|++.|.+-.+ ..+.....+.++++++.+...-+++++. +. .+.+.++|+|+|+...
T Consensus 74 ~~~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~tst 153 (225)
T 1mzh_A 74 KEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETPSAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTST 153 (225)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCTTSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCC
T ss_pred HHHHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhcCceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEECC
Confidence 3356788999999985333 2344455555566655554211233322 11 3566788999998765
Q ss_pred CC----CC---HHHHHhhcCCC-cEEE-EecCCHHHHHHhhhCCCcEEEecc
Q 010240 387 SD----MP---ARTARALLGPD-KIIG-VSCKTPEEAHQAWIDGANYIGCGG 429 (514)
Q Consensus 387 ~~----~~---~~~~~~~~~~~-~~ig-~s~~~~~e~~~a~~~g~d~v~~~~ 429 (514)
.. .. ....++..+.. .+++ -...|.+++.+..+.|||.|+.+.
T Consensus 154 g~~~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~iG~s~ 205 (225)
T 1mzh_A 154 GFAPRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRIGTSS 205 (225)
T ss_dssp SCSSSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESC
T ss_pred CCCCCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHHHHcc
Confidence 22 12 22334333222 2333 345799999999999999987663
No 355
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=85.09 E-value=4.9 Score=38.68 Aligned_cols=102 Identities=16% Similarity=0.234 Sum_probs=58.4
Q ss_pred CCHHHHHHHHHhCCCCEEEEEc-----CCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHH
Q 010240 318 RSITDAVKAALEGGATIIQLRE-----KDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPAR 392 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~ 392 (514)
+.+.+.++.+++.|++.+.+-- ..++.+|..++++...+.+.. +++
T Consensus 43 ~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g-rvp---------------------------- 93 (315)
T 3si9_A 43 KAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAK-RVP---------------------------- 93 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSC----------------------------
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCC-CCc----------------------------
Confidence 4577788889999999987633 345677766666655543321 233
Q ss_pred HHHhhcCCCcEEEEecCCH----HHHHHhhhCCCcEEEeccccCCCCCCCCccCC-HHHHHHHHHcCCCCEEEE
Q 010240 393 TARALLGPDKIIGVSCKTP----EEAHQAWIDGANYIGCGGVYPTNTKANNLTVG-LDGLKTVCLASKLPVVAI 461 (514)
Q Consensus 393 ~~~~~~~~~~~ig~s~~~~----~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g-~~~l~~~~~~~~~pv~a~ 461 (514)
.++|+++.+. +.++.|.+.|+|.+.+.|-+.. |+. .-| .++++.+.+..++||+.-
T Consensus 94 ---------ViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~--~~~--~~~l~~~f~~va~a~~lPiilY 154 (315)
T 3si9_A 94 ---------VVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYN--RPN--QRGLYTHFSSIAKAISIPIIIY 154 (315)
T ss_dssp ---------BEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSS--CCC--HHHHHHHHHHHHHHCSSCEEEE
T ss_pred ---------EEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCC--CCC--HHHHHHHHHHHHHcCCCCEEEE
Confidence 3444444432 3355666777777766543321 221 112 256666666666776655
No 356
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=84.92 E-value=1 Score=44.12 Aligned_cols=151 Identities=12% Similarity=0.027 Sum_probs=87.5
Q ss_pred CCHHHHHHHHHhCCCCEEEEE----cC---------CCCHHHHHHHHHHHHHHHhhcCceEEEc--------CcHHHHHh
Q 010240 318 RSITDAVKAALEGGATIIQLR----EK---------DADTRGFLEAAKACLQICCVHGVPLLIN--------DRIDIALA 376 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr----~~---------~~~~~~~~~~~~~~~~~~~~~~~~l~v~--------~~~~~a~~ 376 (514)
++..++++.+.+.|++.|++- .+ ..++.+ .++++++.. -++++..- .+++.+.+
T Consensus 30 e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e---~l~~i~~~~--~~~~i~~l~~p~~~~~~~i~~a~~ 104 (345)
T 1nvm_A 30 DDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLE---YIEAVAGEI--SHAQIATLLLPGIGSVHDLKNAYQ 104 (345)
T ss_dssp HHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHH---HHHHHHTTC--SSSEEEEEECBTTBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHH---HHHHHHhhC--CCCEEEEEecCCcccHHHHHHHHh
Confidence 556778888989999999994 22 133333 333333311 24554322 35678889
Q ss_pred CCCCeEEeCCCCC----CHHHHH--hhcCCCcEEEEec---CCHHH----HHHhhhCCCcEEEeccccCCCCCCCCccCC
Q 010240 377 CDADGVHLGQSDM----PARTAR--ALLGPDKIIGVSC---KTPEE----AHQAWIDGANYIGCGGVYPTNTKANNLTVG 443 (514)
Q Consensus 377 ~ga~gvhl~~~~~----~~~~~~--~~~~~~~~ig~s~---~~~~e----~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g 443 (514)
+|++++|+....- ....++ +..+......+++ .+++. +..+.+.|+|.|.+. .|.. ...|..
T Consensus 105 aGvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~---DT~G--~~~P~~ 179 (345)
T 1nvm_A 105 AGARVVRVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMA---DSGG--AMSMND 179 (345)
T ss_dssp HTCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEE---CTTC--CCCHHH
T ss_pred CCcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEEC---CCcC--ccCHHH
Confidence 9999998864221 111111 1223333333322 24554 555678899999653 2211 111122
Q ss_pred -HHHHHHHHHcC--CCCEEEE----CCCCcccHHHHHHCCCC
Q 010240 444 -LDGLKTVCLAS--KLPVVAI----GGIGISNASDVMKIGVS 478 (514)
Q Consensus 444 -~~~l~~~~~~~--~~pv~a~----GGi~~~~~~~~~~~Ga~ 478 (514)
.+.++++++.+ ++|+-.= -|....|.-..+++|++
T Consensus 180 v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~ 221 (345)
T 1nvm_A 180 IRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCD 221 (345)
T ss_dssp HHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCCC
Confidence 36677888877 6776553 37778889999999999
No 357
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=84.86 E-value=2.6 Score=40.33 Aligned_cols=153 Identities=14% Similarity=0.077 Sum_probs=89.4
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCH-----HHHHHHHHHHHHHHhhcCceEEE--c--CcHHHHHhCCCCeEEeCCCC
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADT-----RGFLEAAKACLQICCVHGVPLLI--N--DRIDIALACDADGVHLGQSD 388 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~v--~--~~~~~a~~~ga~gvhl~~~~ 388 (514)
++-.++++++.+.|++.|+.-....+. .+..+.+ +.+.+..++++.+ . ++++.+.++|++.||+....
T Consensus 30 e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~---~~~~~~~~~~~~~l~~~~~~i~~a~~aG~~~v~i~~~~ 106 (302)
T 2ftp_A 30 ADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVF---AGIRQRPGVTYAALAPNLKGFEAALESGVKEVAVFAAA 106 (302)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHH---HHSCCCTTSEEEEECCSHHHHHHHHHTTCCEEEEEEES
T ss_pred HHHHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHH---HHhhhcCCCEEEEEeCCHHHHHHHHhCCcCEEEEEEec
Confidence 567778888989999999997522110 1112222 2223334555532 2 24678899999999973221
Q ss_pred CC------------------HHHHHhhcCCCcEEE------Eec-----CCHHHHHH----hhhCCCcEEEeccccCCCC
Q 010240 389 MP------------------ARTARALLGPDKIIG------VSC-----KTPEEAHQ----AWIDGANYIGCGGVYPTNT 435 (514)
Q Consensus 389 ~~------------------~~~~~~~~~~~~~ig------~s~-----~~~~e~~~----a~~~g~d~v~~~~vf~t~~ 435 (514)
-+ ...++.....+..+- .+| ++++++.+ +.+.|+|.+.+. +|
T Consensus 107 s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~---DT-- 181 (302)
T 2ftp_A 107 SEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLG---DT-- 181 (302)
T ss_dssp CHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEE---ES--
T ss_pred CHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEe---CC--
Confidence 11 111222223344442 122 46776443 448999999775 22
Q ss_pred CCCC-ccCCHHHHHHHHHcC-CCCEEEEC----CCCcccHHHHHHCCCC
Q 010240 436 KANN-LTVGLDGLKTVCLAS-KLPVVAIG----GIGISNASDVMKIGVS 478 (514)
Q Consensus 436 k~~~-~~~g~~~l~~~~~~~-~~pv~a~G----Gi~~~~~~~~~~~Ga~ 478 (514)
.... |..-.+.++++++.+ ++|+-.=| |+...|....+++|++
T Consensus 182 ~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~ 230 (302)
T 2ftp_A 182 IGVGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIA 230 (302)
T ss_dssp SSCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCC
T ss_pred CCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCC
Confidence 2222 222346777777777 57876654 6667899999999999
No 358
>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel, unusual catalysis, disease mutati glycosyltransferase, lyase, multifunctional enzyme; HET: U1P; 1.10A {Homo sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A* 3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A* 3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3l0k_A* 3l0n_A* ...
Probab=84.85 E-value=1.4 Score=41.19 Aligned_cols=52 Identities=13% Similarity=0.178 Sum_probs=40.9
Q ss_pred EEEECCCCcc-----------cHHHHH-HCCCCCCceEEEeecccCCCCHHHHHHHHHHH-HHHHhhh
Q 010240 458 VVAIGGIGIS-----------NASDVM-KIGVSNLKGVAVVSALFDRECILPESKKLHAV-LMDAVQR 512 (514)
Q Consensus 458 v~a~GGi~~~-----------~~~~~~-~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~-~~~~~~~ 512 (514)
++..-||.+. +..+++ ++|++ .+.+||.|++++||.++++++++. |+.+.+|
T Consensus 193 ~~vTPGIr~~~~~~~~~~r~~tp~~a~~~aGad---~iVvGR~I~~a~dp~~a~~~~~~~~w~ay~~~ 257 (260)
T 3eww_A 193 LHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSD---IIIVGRGIISAADRLEAAEMYRKAAWEAYLSR 257 (260)
T ss_dssp EEEECSBCSSSEECTTSCEEBCHHHHHTTSCCS---EEEESHHHHTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCcCCCCCCCccCCCccCHHHHHHhcCCC---EEEEChhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4556666543 578889 99999 999999999999999999998854 4444444
No 359
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=84.84 E-value=3.1 Score=38.43 Aligned_cols=127 Identities=13% Similarity=0.056 Sum_probs=75.1
Q ss_pred cHHHHHhCCCCeEEeCCCC------CCHH----HHHhhcCCCcEEEEecCCHHHHHHh--------------h----hCC
Q 010240 370 RIDIALACDADGVHLGQSD------MPAR----TARALLGPDKIIGVSCKTPEEAHQA--------------W----IDG 421 (514)
Q Consensus 370 ~~~~a~~~ga~gvhl~~~~------~~~~----~~~~~~~~~~~ig~s~~~~~e~~~a--------------~----~~g 421 (514)
.+....++|+++|-++.+. .... +++..+..++.+.+-+....|-+++ . ...
T Consensus 79 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~ 158 (248)
T 1r2r_A 79 SPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWS 158 (248)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHTCSCGG
T ss_pred CHHHHHHcCCCEEEECChhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCChHHHHHHHHHHHHhhhhhhh
Confidence 4667777888888776532 1112 3344455677777666643332321 1 122
Q ss_pred CcEEEeccccCCCCCCCCccCCH----HHHHHHHH-cC------CCCEEEECCCCcccHHHHHHCCCCCCceEEEeeccc
Q 010240 422 ANYIGCGGVYPTNTKANNLTVGL----DGLKTVCL-AS------KLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 422 ~d~v~~~~vf~t~~k~~~~~~g~----~~l~~~~~-~~------~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~ 490 (514)
-.+|.+=|+..-.|...+++-.. ..++.+.. .+ .++|+==|+++++|+.+++..- +|||+-+|++-+
T Consensus 159 ~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~--diDG~LVGgAsL 236 (248)
T 1r2r_A 159 KVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQP--DVDGFLVGGASL 236 (248)
T ss_dssp GEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECSCCCTTTHHHHHTST--TCCEEEESGGGG
T ss_pred ceEEEEecHHhhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCcCHhHHHHHHcCC--CCCeeEechHHh
Confidence 34677778887554333322111 22332221 11 4899999999999999988742 445999999999
Q ss_pred CCCCHHHH
Q 010240 491 DRECILPE 498 (514)
Q Consensus 491 ~~~~~~~~ 498 (514)
+++++.+.
T Consensus 237 ~a~~F~~i 244 (248)
T 1r2r_A 237 KPEFVDII 244 (248)
T ss_dssp STHHHHHH
T ss_pred ChHHHHHH
Confidence 87766554
No 360
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=84.78 E-value=5 Score=38.27 Aligned_cols=41 Identities=12% Similarity=0.128 Sum_probs=28.6
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcC-----CCCHHHHHHHHHHHHHHH
Q 010240 318 RSITDAVKAALEGGATIIQLREK-----DADTRGFLEAAKACLQIC 358 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~-----~~~~~~~~~~~~~~~~~~ 358 (514)
+.+.+.++.+++.|++.+.+--. .++.+|..++++...+.+
T Consensus 28 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~ 73 (297)
T 3flu_A 28 EQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHV 73 (297)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHh
Confidence 45777888889999999887333 456777766666555544
No 361
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=84.75 E-value=5.7 Score=38.51 Aligned_cols=49 Identities=8% Similarity=-0.058 Sum_probs=33.8
Q ss_pred CCHHHHHHHHHhCCCCEEEEE-----cCCCCHHHHHHHHHHHHHHHhhcCceEEE
Q 010240 318 RSITDAVKAALEGGATIIQLR-----EKDADTRGFLEAAKACLQICCVHGVPLLI 367 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~v 367 (514)
+.+.+.++.+++.|++.+.+- ...++.+|..++++...+.+.. ++++++
T Consensus 55 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g-rvpVia 108 (332)
T 2r8w_A 55 EAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRG-RRTLMA 108 (332)
T ss_dssp HHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEE
Confidence 447788888999999998873 3467778877777766654432 355554
No 362
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=84.69 E-value=4.6 Score=38.88 Aligned_cols=41 Identities=12% Similarity=0.179 Sum_probs=29.2
Q ss_pred CCHHHHHHHHHhCCCCEEEEEc-----CCCCHHHHHHHHHHHHHHH
Q 010240 318 RSITDAVKAALEGGATIIQLRE-----KDADTRGFLEAAKACLQIC 358 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~-----~~~~~~~~~~~~~~~~~~~ 358 (514)
+.+.+.++.+++.|++.+.+-- ..++.+|..++++...+.+
T Consensus 45 ~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~ 90 (315)
T 3na8_A 45 PALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTV 90 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHh
Confidence 4577788889999999987732 3566777777666665544
No 363
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=84.58 E-value=7 Score=37.97 Aligned_cols=155 Identities=10% Similarity=0.054 Sum_probs=90.6
Q ss_pred CCHHHHHH-HHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHH---Hhh-cCceEEE--c--CcHHHHHhCCCCeEEeCCCC
Q 010240 318 RSITDAVK-AALEGGATIIQLREKDADTRGFLEAAKACLQI---CCV-HGVPLLI--N--DRIDIALACDADGVHLGQSD 388 (514)
Q Consensus 318 ~~~~~~~~-~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~---~~~-~~~~l~v--~--~~~~~a~~~ga~gvhl~~~~ 388 (514)
++-.++++ ++.+.|++.|++-....++.++ +.++++.+. ... .++++.. . .+++.+.++|++.||+....
T Consensus 41 ~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~i~~l~~~~~~i~~a~~~g~~~v~i~~~~ 119 (337)
T 3ble_A 41 SEKLNIAKFLLQKLNVDRVEIASARVSKGEL-ETVQKIMEWAATEQLTERIEILGFVDGNKTVDWIKDSGAKVLNLLTKG 119 (337)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEETTSCTTHH-HHHHHHHHHHHHTTCGGGEEEEEESSTTHHHHHHHHHTCCEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCChhHH-HHHHHHHhhhhhhccCCCCeEEEEccchhhHHHHHHCCCCEEEEEEec
Confidence 45667788 8889999999998876544332 223333332 101 1333332 1 25778889999999885422
Q ss_pred CCH------------------HHHHhhcCCCcEEEEecC--------CHH----HHHHhhhCCCcEEEeccccCCCCCCC
Q 010240 389 MPA------------------RTARALLGPDKIIGVSCK--------TPE----EAHQAWIDGANYIGCGGVYPTNTKAN 438 (514)
Q Consensus 389 ~~~------------------~~~~~~~~~~~~ig~s~~--------~~~----e~~~a~~~g~d~v~~~~vf~t~~k~~ 438 (514)
-+. ..++.....+..+..++. +++ -++.+.+.|+|.|.+. +|. ..
T Consensus 120 s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~---DT~--G~ 194 (337)
T 3ble_A 120 SLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERIFLP---DTL--GV 194 (337)
T ss_dssp SHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEEEEE---CTT--CC
T ss_pred CHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEEEe---cCC--CC
Confidence 111 111222233445554443 354 3566779999999653 221 11
Q ss_pred CccCC-HHHHHHHHHcC-CCCEEEE----CCCCcccHHHHHHCCCC
Q 010240 439 NLTVG-LDGLKTVCLAS-KLPVVAI----GGIGISNASDVMKIGVS 478 (514)
Q Consensus 439 ~~~~g-~~~l~~~~~~~-~~pv~a~----GGi~~~~~~~~~~~Ga~ 478 (514)
..|.. .+.++++++.+ ++|+-.= -|....|.-..+++|++
T Consensus 195 ~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa~ 240 (337)
T 3ble_A 195 LSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGVK 240 (337)
T ss_dssp CCHHHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCCC
Confidence 22222 35677777777 6776554 56667788899999999
No 364
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=84.57 E-value=6.3 Score=35.26 Aligned_cols=95 Identities=14% Similarity=0.212 Sum_probs=58.4
Q ss_pred HHhCCCCeEEeCCCCCCHH----HHHhhcCCCcEEEE-ecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHH
Q 010240 374 ALACDADGVHLGQSDMPAR----TARALLGPDKIIGV-SCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLK 448 (514)
Q Consensus 374 a~~~ga~gvhl~~~~~~~~----~~~~~~~~~~~ig~-s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~ 448 (514)
+.+.|++.+|+...+.... .+++.++...++|. ++.+.+++..+.+.|+|+|.++. ...+.++
T Consensus 28 ~~~~G~~~i~l~~~~~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~~~------------~~~~~~~ 95 (212)
T 2v82_A 28 VIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVTPN------------IHSEVIR 95 (212)
T ss_dssp HHHHTCCEEEEETTSTTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEEECSS------------CCHHHHH
T ss_pred HHHCCCCEEEEeCCChhHHHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEEEeCC------------CCHHHHH
Confidence 3455778888876654431 23333445677764 34678899999999999995332 1234443
Q ss_pred HHHHcCCCCEEEECCCCcccHHHHHHCCCCCCceEEE
Q 010240 449 TVCLASKLPVVAIGGIGISNASDVMKIGVSNLKGVAV 485 (514)
Q Consensus 449 ~~~~~~~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~ 485 (514)
. ++..+.++++ |=-+++.+....+.|++ .|.+
T Consensus 96 ~-~~~~g~~~~~-g~~t~~e~~~a~~~G~d---~v~v 127 (212)
T 2v82_A 96 R-AVGYGMTVCP-GCATATEAFTALEAGAQ---ALKI 127 (212)
T ss_dssp H-HHHTTCEEEC-EECSHHHHHHHHHTTCS---EEEE
T ss_pred H-HHHcCCCEEe-ecCCHHHHHHHHHCCCC---EEEE
Confidence 3 3445666542 32245666777788999 8874
No 365
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=84.56 E-value=6.3 Score=37.72 Aligned_cols=41 Identities=15% Similarity=0.086 Sum_probs=30.1
Q ss_pred CCHHHHHHHHHhCCCCEEEEE-----cCCCCHHHHHHHHHHHHHHH
Q 010240 318 RSITDAVKAALEGGATIIQLR-----EKDADTRGFLEAAKACLQIC 358 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr-----~~~~~~~~~~~~~~~~~~~~ 358 (514)
+.+.+.++.+++.|++.+.+- ...++.+|..++++...+.+
T Consensus 37 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~ 82 (304)
T 3cpr_A 37 AAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEV 82 (304)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHh
Confidence 457788888999999998873 34677888777776665544
No 366
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=84.56 E-value=1.2 Score=42.67 Aligned_cols=153 Identities=16% Similarity=0.101 Sum_probs=89.9
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCH-----HHHHHHHHHHHHHHhhcCceEEE--cC--cHHHHHhCCCCeEEeCC--
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADT-----RGFLEAAKACLQICCVHGVPLLI--ND--RIDIALACDADGVHLGQ-- 386 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~v--~~--~~~~a~~~ga~gvhl~~-- 386 (514)
++..++++++.+.|++.|++-...... .+..+.++.+ .+..++++.+ .+ .++.+.++|++.||+..
T Consensus 26 e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i---~~~~~~~v~~l~~n~~~i~~a~~~G~~~V~i~~~~ 102 (295)
T 1ydn_A 26 ADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGI---RRADGVRYSVLVPNMKGYEAAAAAHADEIAVFISA 102 (295)
T ss_dssp HHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHS---CCCSSSEEEEECSSHHHHHHHHHTTCSEEEEEEES
T ss_pred HHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHH---HhCCCCEEEEEeCCHHHHHHHHHCCCCEEEEEEec
Confidence 556778888889999999997643321 1122333333 2223566532 22 45678899999998862
Q ss_pred C--------CCCHH--------HHHhhcCCCcEEE--E---------ecCCHHHHH----HhhhCCCcEEEeccccCCCC
Q 010240 387 S--------DMPAR--------TARALLGPDKIIG--V---------SCKTPEEAH----QAWIDGANYIGCGGVYPTNT 435 (514)
Q Consensus 387 ~--------~~~~~--------~~~~~~~~~~~ig--~---------s~~~~~e~~----~a~~~g~d~v~~~~vf~t~~ 435 (514)
+ ..... .++.....+..+. + +-++++++. .+.+.|+|.+.+. .|
T Consensus 103 S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~---Dt-- 177 (295)
T 1ydn_A 103 SEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLG---DT-- 177 (295)
T ss_dssp CHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEE---ET--
T ss_pred CHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEec---CC--
Confidence 2 11111 1222223344332 1 235777744 3447999999775 22
Q ss_pred CCCC-ccCCHHHHHHHHHcCC-CCEEEEC----CCCcccHHHHHHCCCC
Q 010240 436 KANN-LTVGLDGLKTVCLASK-LPVVAIG----GIGISNASDVMKIGVS 478 (514)
Q Consensus 436 k~~~-~~~g~~~l~~~~~~~~-~pv~a~G----Gi~~~~~~~~~~~Ga~ 478 (514)
.... |..-.+.++++++.++ +|+-.=| |+...|....+++|+.
T Consensus 178 ~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~ 226 (295)
T 1ydn_A 178 IGRGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLR 226 (295)
T ss_dssp TSCCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCC
T ss_pred CCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCCC
Confidence 2222 2223467778877775 7776654 5667888999999999
No 367
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=84.48 E-value=6.2 Score=36.45 Aligned_cols=127 Identities=13% Similarity=0.119 Sum_probs=77.2
Q ss_pred cHHHHHhCCCCeEEeCCCCC------CHH----HHHhhcCCCcEEEEecC-CHHHH-------------HHhhh----CC
Q 010240 370 RIDIALACDADGVHLGQSDM------PAR----TARALLGPDKIIGVSCK-TPEEA-------------HQAWI----DG 421 (514)
Q Consensus 370 ~~~~a~~~ga~gvhl~~~~~------~~~----~~~~~~~~~~~ig~s~~-~~~e~-------------~~a~~----~g 421 (514)
.+....++|+++|-++.+.. ... +.+..+..++.+.+-+. +.+|- ..+.+ ..
T Consensus 79 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~ 158 (248)
T 1o5x_A 79 SAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFD 158 (248)
T ss_dssp CHHHHHHTTCCEEEECCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHTTGGGCCCTT
T ss_pred CHHHHHHcCCCEEEeCChhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCChHHHHHHHHHHHHhhhhhhc
Confidence 46677778888887765321 111 33444556777776665 44432 11121 12
Q ss_pred CcEEEeccccCCCCCCCCccCCH----HHHHHHHHc-C------CCCEEEECCCCcccHHHHHH-CCCCCCceEEEeecc
Q 010240 422 ANYIGCGGVYPTNTKANNLTVGL----DGLKTVCLA-S------KLPVVAIGGIGISNASDVMK-IGVSNLKGVAVVSAL 489 (514)
Q Consensus 422 ~d~v~~~~vf~t~~k~~~~~~g~----~~l~~~~~~-~------~~pv~a~GGi~~~~~~~~~~-~Ga~~~~gva~~~~i 489 (514)
-.+|..=|+..-.|...+++-.. ..++.+... + .++|+=-|+++++|+.++++ .++| |+-+|++-
T Consensus 159 ~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diD---G~LVGgAs 235 (248)
T 1o5x_A 159 NVILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDID---GFLVGNAS 235 (248)
T ss_dssp SEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSEEEECSCCCTTTHHHHHTSTTCC---EEEECGGG
T ss_pred CEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCcceEEEcCCCCHHHHHHHHcCCCCC---eeEeeHHH
Confidence 45666778876544322321111 223333211 1 48899999999999999998 6666 99999999
Q ss_pred cCCCCHHHHHH
Q 010240 490 FDRECILPESK 500 (514)
Q Consensus 490 ~~~~~~~~~~~ 500 (514)
++ +++.+.++
T Consensus 236 L~-~~F~~ii~ 245 (248)
T 1o5x_A 236 LK-ESFVDIIK 245 (248)
T ss_dssp GS-TTHHHHHH
T ss_pred HH-HHHHHHHH
Confidence 99 88877764
No 368
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=84.40 E-value=5.7 Score=37.68 Aligned_cols=49 Identities=8% Similarity=0.134 Sum_probs=34.4
Q ss_pred CCHHHHHHHHHhCCCCEEEEE-----cCCCCHHHHHHHHHHHHHHHhhcCceEEE
Q 010240 318 RSITDAVKAALEGGATIIQLR-----EKDADTRGFLEAAKACLQICCVHGVPLLI 367 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~v 367 (514)
+.+.+.++.+++.|++.+.+- ...++.+|..+.++...+.+.. ++++++
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pvia 74 (289)
T 2yxg_A 21 DGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNG-RVQVIA 74 (289)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEE
Confidence 457788888999999998873 3456778877777766655432 455554
No 369
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=84.30 E-value=5.7 Score=37.76 Aligned_cols=49 Identities=4% Similarity=0.107 Sum_probs=33.6
Q ss_pred CCHHHHHHHHHhCCCCEEEEE-----cCCCCHHHHHHHHHHHHHHHhhcCceEEE
Q 010240 318 RSITDAVKAALEGGATIIQLR-----EKDADTRGFLEAAKACLQICCVHGVPLLI 367 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~v 367 (514)
+.+.+.++.+++.|++.+.+- ...++.+|..++++...+.+.. ++++++
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpvia 74 (294)
T 2ehh_A 21 EALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAG-RIKVIA 74 (294)
T ss_dssp HHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEE
Confidence 457788888999999998873 3466777777777766654432 355554
No 370
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=84.25 E-value=5.6 Score=38.00 Aligned_cols=58 Identities=14% Similarity=0.075 Sum_probs=36.1
Q ss_pred CceEEEEeCCCCCc-cCCCCHHHHHHHHHhCCCCEEEEE-----cCCCCHHHHHHHHHHHHHHH
Q 010240 301 DLFLYAVTDSGMNK-KWGRSITDAVKAALEGGATIIQLR-----EKDADTRGFLEAAKACLQIC 358 (514)
Q Consensus 301 ~~~ly~it~~~~~~-~~~~~~~~~~~~~~~~Gv~~v~lr-----~~~~~~~~~~~~~~~~~~~~ 358 (514)
.....++||-.... -..+.+.+.++.+++.|++.+.+- ...++.+|..++++...+.+
T Consensus 15 Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~ 78 (301)
T 1xky_A 15 TIATAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVV 78 (301)
T ss_dssp SEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHH
T ss_pred ceEEeeECcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHh
Confidence 44555566532111 112457788888999999998873 33567777777766665544
No 371
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=84.09 E-value=4.9 Score=38.70 Aligned_cols=41 Identities=15% Similarity=0.213 Sum_probs=29.4
Q ss_pred CCHHHHHHHHHhCCCCEEEEE-----cCCCCHHHHHHHHHHHHHHH
Q 010240 318 RSITDAVKAALEGGATIIQLR-----EKDADTRGFLEAAKACLQIC 358 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr-----~~~~~~~~~~~~~~~~~~~~ 358 (514)
+.+.+.++.+++.|++.+.+- ...++.+|..++++...+.+
T Consensus 44 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~ 89 (314)
T 3qze_A 44 DSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQV 89 (314)
T ss_dssp HHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHh
Confidence 457778888899999998873 24567777777766665544
No 372
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=84.05 E-value=3.6 Score=39.94 Aligned_cols=104 Identities=14% Similarity=0.180 Sum_probs=66.8
Q ss_pred HHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEc-C---cHHHHHhCCCCeEEeCCC-------C
Q 010240 320 ITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLIN-D---RIDIALACDADGVHLGQS-------D 388 (514)
Q Consensus 320 ~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~-~---~~~~a~~~ga~gvhl~~~-------~ 388 (514)
+.+.++.+.+.|++.|++-... +.++. +.++ +.+.++++. . ..+.+.+.|+|++.+... .
T Consensus 77 ~~~~~~~a~~~g~d~V~~~~g~--p~~~i---~~l~----~~g~~v~~~v~~~~~a~~~~~~GaD~i~v~g~~~GG~~g~ 147 (332)
T 2z6i_A 77 VEDIVDLVIEEGVKVVTTGAGN--PSKYM---ERFH----EAGIIVIPVVPSVALAKRMEKIGADAVIAEGMEAGGHIGK 147 (332)
T ss_dssp HHHHHHHHHHTTCSEEEECSSC--GGGTH---HHHH----HTTCEEEEEESSHHHHHHHHHTTCSCEEEECTTSSEECCS
T ss_pred HHHHHHHHHHCCCCEEEECCCC--hHHHH---HHHH----HcCCeEEEEeCCHHHHHHHHHcCCCEEEEECCCCCCCCCC
Confidence 5677888999999999986542 33322 2232 346666641 2 344566889998887221 1
Q ss_pred CC-H---HHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccC
Q 010240 389 MP-A---RTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYP 432 (514)
Q Consensus 389 ~~-~---~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~ 432 (514)
.. . ..+++......+..-...|++.+.++...|+|.|.+|.-|-
T Consensus 148 ~~~~~ll~~i~~~~~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l 195 (332)
T 2z6i_A 148 LTTMTLVRQVATAISIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFV 195 (332)
T ss_dssp SCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred ccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHh
Confidence 11 1 23333344455555566789999999999999999986664
No 373
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=84.05 E-value=0.73 Score=43.53 Aligned_cols=61 Identities=15% Similarity=0.164 Sum_probs=40.3
Q ss_pred HHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHH---------cCCCCEEEECCCC-cccHHHHHHCCC
Q 010240 414 AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCL---------ASKLPVVAIGGIG-ISNASDVMKIGV 477 (514)
Q Consensus 414 ~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~---------~~~~pv~a~GGi~-~~~~~~~~~~Ga 477 (514)
++.+.+.|+|||=.|.-|.+ .++..-..+.+++..+ ..+++|-|.|||. .+++.+++++|+
T Consensus 178 ~~ia~eaGADfVKTSTGf~~---~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al~~i~aga 248 (281)
T 2a4a_A 178 TLAVLNGNADFIKTSTGKVQ---INATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTASHYILLAR 248 (281)
T ss_dssp HHHHHTTTCSEEECCCSCSS---CCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEeCCCCCC---CCCCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHHHHHHHHHHhh
Confidence 46677999999966554431 2333334455555543 3479999999997 567777777755
No 374
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=83.67 E-value=11 Score=30.01 Aligned_cols=89 Identities=12% Similarity=0.029 Sum_probs=62.8
Q ss_pred EecCCHHHHHHhhh--------CCCcEEEeccccCCCCCCCCccCCHHHHHHHHHc---CCCCEEEECCCC-cccHHHHH
Q 010240 406 VSCKTPEEAHQAWI--------DGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLA---SKLPVVAIGGIG-ISNASDVM 473 (514)
Q Consensus 406 ~s~~~~~e~~~a~~--------~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~---~~~pv~a~GGi~-~~~~~~~~ 473 (514)
..+.+.+++..... ...|.+++.--.+. .-|++.++++++. .++|++.+.+-. .+....++
T Consensus 32 ~~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~-------~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~ 104 (140)
T 1k68_A 32 VTVRDGMEAMAYLRQEGEYANASRPDLILLXLNLPK-------KDGREVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSY 104 (140)
T ss_dssp EEECSHHHHHHHHTTCGGGGSCCCCSEEEECSSCSS-------SCHHHHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHH
T ss_pred EEECCHHHHHHHHHcccccccCCCCcEEEEecCCCc-------ccHHHHHHHHHcCcccccccEEEEecCCcHHHHHHHH
Confidence 35778888877765 46899988754442 2378889999875 368988887664 56778899
Q ss_pred HCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 474 KIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 474 ~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
++|++ ++ +...-++.+....+...++..
T Consensus 105 ~~g~~---~~-----l~kP~~~~~l~~~i~~~~~~~ 132 (140)
T 1k68_A 105 DLHVN---CY-----ITKSANLSQLFQIVKGIEEFW 132 (140)
T ss_dssp HTTCS---EE-----EECCSSHHHHHHHHHHHHHHH
T ss_pred Hhchh---he-----ecCCCCHHHHHHHHHHHHHHH
Confidence 99999 65 334556666666666666554
No 375
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=83.66 E-value=5.6 Score=37.79 Aligned_cols=49 Identities=10% Similarity=0.182 Sum_probs=33.0
Q ss_pred CCHHHHHHHHHhCCCCEEEEE-----cCCCCHHHHHHHHHHHHHHHhhcCceEEE
Q 010240 318 RSITDAVKAALEGGATIIQLR-----EKDADTRGFLEAAKACLQICCVHGVPLLI 367 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~v 367 (514)
+.+.+.++.+++.|++.+.+- ...++.+|..+.++...+.+.. ++++++
T Consensus 22 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pvia 75 (292)
T 2ojp_A 22 ASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADG-RIPVIA 75 (292)
T ss_dssp HHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC-CCcEEE
Confidence 457788888899999998873 3466777777777666554432 344443
No 376
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=83.36 E-value=5.6 Score=37.91 Aligned_cols=49 Identities=10% Similarity=0.083 Sum_probs=32.8
Q ss_pred CCHHHHHHHHHhCCCCEEEEE-----cCCCCHHHHHHHHHHHHHHHhhcCceEEE
Q 010240 318 RSITDAVKAALEGGATIIQLR-----EKDADTRGFLEAAKACLQICCVHGVPLLI 367 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~v 367 (514)
+.+.+.++.+++.|++.+.+- ...++.+|..++++...+.+.. ++++++
T Consensus 21 ~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpvia 74 (297)
T 2rfg_A 21 KALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQG-RVPVIA 74 (297)
T ss_dssp HHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEE
T ss_pred HHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEE
Confidence 457788888999999998773 3467777777777666554432 344443
No 377
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=83.17 E-value=4.2 Score=38.97 Aligned_cols=49 Identities=8% Similarity=0.086 Sum_probs=32.6
Q ss_pred CCHHHHHHHHHhCCCCEEEEEc-----CCCCHHHHHHHHHHHHHHHhhcCceEEE
Q 010240 318 RSITDAVKAALEGGATIIQLRE-----KDADTRGFLEAAKACLQICCVHGVPLLI 367 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~v 367 (514)
+.+.+.++.+++.|++.+.+-- ..++.+|..++++...+.+.. ++++++
T Consensus 36 ~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~g-rvpvia 89 (304)
T 3l21_A 36 ATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGD-RARVIA 89 (304)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-TSEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEE
Confidence 5577888889999999988743 355677777776666554422 344444
No 378
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=83.09 E-value=0.99 Score=46.58 Aligned_cols=68 Identities=13% Similarity=0.047 Sum_probs=52.1
Q ss_pred CHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEEECCCCcccHHHHHHCCCCCCceEEEe
Q 010240 410 TPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVAIGGIGISNASDVMKIGVSNLKGVAVV 486 (514)
Q Consensus 410 ~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~ 486 (514)
+.+.+..+.+.|+|+|.+..-.+ .+..-++.++++++.+ ++||++-...+.+.+..+.++|++ +|.++
T Consensus 230 ~~~~a~~l~~aG~d~I~id~a~g------~~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD---~I~vg 298 (490)
T 4avf_A 230 TGERVAALVAAGVDVVVVDTAHG------HSKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGAD---AVKVG 298 (490)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCC------SBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCS---EEEEC
T ss_pred hHHHHHHHhhcccceEEecccCC------cchhHHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcCCC---EEEEC
Confidence 46778888899999997753221 1222357889998887 789988556789999999999999 99884
No 379
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=83.01 E-value=8.3 Score=37.43 Aligned_cols=59 Identities=15% Similarity=0.031 Sum_probs=38.0
Q ss_pred HHHhCCCCeEEeCCCC--------CC------HHHHHhhcCCCcEEEEecCCHHHHHHhhhCC-CcEEEecccc
Q 010240 373 IALACDADGVHLGQSD--------MP------ARTARALLGPDKIIGVSCKTPEEAHQAWIDG-ANYIGCGGVY 431 (514)
Q Consensus 373 ~a~~~ga~gvhl~~~~--------~~------~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g-~d~v~~~~vf 431 (514)
.+.+.|++++|+.... .+ ...+++......+.+-..+|++++.++.+.| +|+|.+|-.+
T Consensus 237 ~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~ 310 (338)
T 1z41_A 237 WMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIFIGREL 310 (338)
T ss_dssp HHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHH
T ss_pred HHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEeecHHH
Confidence 3447899999985421 11 1234444433333333456899999999999 9999998655
No 380
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=82.88 E-value=2.4 Score=39.85 Aligned_cols=39 Identities=18% Similarity=0.203 Sum_probs=32.1
Q ss_pred HHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEecccc
Q 010240 393 TARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVY 431 (514)
Q Consensus 393 ~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf 431 (514)
.+|+.......+|..++|++.+.++...|||.+++|..+
T Consensus 199 ~lr~~~~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai 237 (268)
T 1qop_A 199 KLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAISGSAI 237 (268)
T ss_dssp HHHHTTCCCEEEESSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHhccCCcEEEECCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 445544567888989999999999999999999998765
No 381
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=82.84 E-value=6.1 Score=37.78 Aligned_cols=99 Identities=13% Similarity=0.083 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCCCEEEE-----EcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHHHH
Q 010240 320 ITDAVKAALEGGATIIQL-----REKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPARTA 394 (514)
Q Consensus 320 ~~~~~~~~~~~Gv~~v~l-----r~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~~~ 394 (514)
+.+.++.+++.|++.+.+ -...++.+|..++++...+.+.. ++++++
T Consensus 34 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-rvpVia--------------------------- 85 (303)
T 2wkj_A 34 LRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKG-KIKLIA--------------------------- 85 (303)
T ss_dssp HHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-TSEEEE---------------------------
T ss_pred HHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCC-CCcEEE---------------------------
Q ss_pred HhhcCCCcEEEEecCCHHH----HHHhhhCCCcEEEeccccCCCCCCCCccCCH-HHHHHHHHcCC-CCEEE
Q 010240 395 RALLGPDKIIGVSCKTPEE----AHQAWIDGANYIGCGGVYPTNTKANNLTVGL-DGLKTVCLASK-LPVVA 460 (514)
Q Consensus 395 ~~~~~~~~~ig~s~~~~~e----~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~-~~l~~~~~~~~-~pv~a 460 (514)
|+++.+..| ++.|.+.|+|.+.+.|-+... .+.-++ ++++.+.+..+ +||+.
T Consensus 86 ----------Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~----~s~~~l~~~f~~va~a~~~lPiil 143 (303)
T 2wkj_A 86 ----------HVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYP----FSFEEHCDHYRAIIDSADGLPMVV 143 (303)
T ss_dssp ----------ECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSC----CCHHHHHHHHHHHHHHHTTCCEEE
T ss_pred ----------ecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCCC----CCHHHHHHHHHHHHHhCCCCCEEE
No 382
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=82.84 E-value=2.9 Score=40.33 Aligned_cols=119 Identities=15% Similarity=0.138 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCCCEEEE-----EcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHHHH
Q 010240 320 ITDAVKAALEGGATIIQL-----REKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPARTA 394 (514)
Q Consensus 320 ~~~~~~~~~~~Gv~~v~l-----r~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~~~ 394 (514)
+.+.++.+++.|++.+.+ -...++.+|..++++...+.+..
T Consensus 35 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~g---------------------------------- 80 (316)
T 3e96_A 35 YKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHG---------------------------------- 80 (316)
T ss_dssp HHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTT----------------------------------
T ss_pred HHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCC----------------------------------
Q ss_pred HhhcCCCcEEEEecCCHHH----HHHhhhCCCcEEEec-cccCCCCCCCCccCCHHHHHHHHHcCCCCEEEEC---CCCc
Q 010240 395 RALLGPDKIIGVSCKTPEE----AHQAWIDGANYIGCG-GVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIG---GIGI 466 (514)
Q Consensus 395 ~~~~~~~~~ig~s~~~~~e----~~~a~~~g~d~v~~~-~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~G---Gi~~ 466 (514)
+...++|++. +..| ++.|.+.|+|.+.+. |.|...+..+. .++++.+.+..++||+.-= .+++
T Consensus 81 ----rvpViaGvg~-~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l----~~~f~~va~a~~lPiilYn~g~~l~~ 151 (316)
T 3e96_A 81 ----RALVVAGIGY-ATSTAIELGNAAKAAGADAVMIHMPIHPYVTAGGV----YAYFRDIIEALDFPSLVYFKDPEISD 151 (316)
T ss_dssp ----SSEEEEEECS-SHHHHHHHHHHHHHHTCSEEEECCCCCSCCCHHHH----HHHHHHHHHHHTSCEEEEECCTTSCT
T ss_pred ----CCcEEEEeCc-CHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHH----HHHHHHHHHhCCCCEEEEeCCCCCCH
Q ss_pred ccHHHHHHCCCCCCceE
Q 010240 467 SNASDVMKIGVSNLKGV 483 (514)
Q Consensus 467 ~~~~~~~~~Ga~~~~gv 483 (514)
+.+.++.+.. ||-||
T Consensus 152 ~~~~~La~~p--nIvgi 166 (316)
T 3e96_A 152 RVLVDLAPLQ--NLVGV 166 (316)
T ss_dssp HHHHHHTTCT--TEEEE
T ss_pred HHHHHHHcCC--CEEEE
No 383
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=82.71 E-value=5 Score=37.92 Aligned_cols=156 Identities=15% Similarity=0.071 Sum_probs=88.9
Q ss_pred ceEEEEeCCCCCcc--C--CCCHHHHHHHHHhCCCCEEEEEcCC--CC------HHHHHHHHHHHHHHHhhcCceEEEcC
Q 010240 302 LFLYAVTDSGMNKK--W--GRSITDAVKAALEGGATIIQLREKD--AD------TRGFLEAAKACLQICCVHGVPLLIND 369 (514)
Q Consensus 302 ~~ly~it~~~~~~~--~--~~~~~~~~~~~~~~Gv~~v~lr~~~--~~------~~~~~~~~~~~~~~~~~~~~~l~v~~ 369 (514)
+.+.-+||.++... + .+...+.+++.++.|+++|=+--.+ +. .+|+.+....+..+.+..++++.|..
T Consensus 18 mGilN~TpdSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT 97 (282)
T 1aj0_A 18 MGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDT 97 (282)
T ss_dssp EEEEECCTTTSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEC
T ss_pred EEEEeCCCCccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeC
Confidence 45666677665331 0 1346677788889999999996522 22 56666666666666666689998865
Q ss_pred c----HHHHHhCCCCeEE-eCC-CCCCHHHHHhhcCCCcEEEEec---CC--------------HH----HHHHhhhCCC
Q 010240 370 R----IDIALACDADGVH-LGQ-SDMPARTARALLGPDKIIGVSC---KT--------------PE----EAHQAWIDGA 422 (514)
Q Consensus 370 ~----~~~a~~~ga~gvh-l~~-~~~~~~~~~~~~~~~~~ig~s~---~~--------------~~----e~~~a~~~g~ 422 (514)
+ .+.|.++|++-|- +.. .+......-..++...++...- .| .+ .+..|.+.|.
T Consensus 98 ~~~~va~aAl~aGa~iINdvsg~~d~~~~~~~a~~~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi 177 (282)
T 1aj0_A 98 SKPEVIRESAKVGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGI 177 (282)
T ss_dssp CCHHHHHHHHHTTCCEEEETTTTCSTTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHhCCeEEEEccCCCCccccccCccchHHHHHHHHHHHHHHHHHHcCC
Confidence 3 3466788998774 332 2333333333445555555331 11 12 2456778898
Q ss_pred c--EEEeccccCCCCCCCCccCCHHHHHHHHHc--CCCCEEE
Q 010240 423 N--YIGCGGVYPTNTKANNLTVGLDGLKTVCLA--SKLPVVA 460 (514)
Q Consensus 423 d--~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~--~~~pv~a 460 (514)
+ -|.+=|-+-. .|.. .-.++.++.+... ++.|++.
T Consensus 178 ~~~~IilDPg~gf-~k~~--~~n~~ll~~l~~~~~~g~P~l~ 216 (282)
T 1aj0_A 178 AKEKLLLDPGFGF-GKNL--SHNYSLLARLAEFHHFNLPLLV 216 (282)
T ss_dssp CGGGEEEECCTTS-SCCH--HHHHHHHHTGGGGGGGCSCBEE
T ss_pred ChhhEEEeCCCCc-ccCH--HHHHHHHHHHHHHhcCCCCEEE
Confidence 7 4666565432 2211 1235555555432 4788654
No 384
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=82.59 E-value=5.4 Score=38.23 Aligned_cols=114 Identities=20% Similarity=0.206 Sum_probs=65.9
Q ss_pred CCHHHHHHHHHhCCCCEEEEE-----cCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHH
Q 010240 318 RSITDAVKAALEGGATIIQLR-----EKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPAR 392 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~ 392 (514)
+.+.+.++.+++.|++.+.+- ...++.+|..++++...+.+.. +++++
T Consensus 33 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g-rvpVi-------------------------- 85 (306)
T 1o5k_A 33 ESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDG-KIPVI-------------------------- 85 (306)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT-SSCEE--------------------------
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC-CCeEE--------------------------
Confidence 457788888999999998873 3467788777776666554421 23333
Q ss_pred HHHhhcCCCcEEEEecCC----HHHHHHhhhCCCcEEEeccccCCCCCCCCccCCH-HHHHHHHHcCCCCEEEE-----C
Q 010240 393 TARALLGPDKIIGVSCKT----PEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGL-DGLKTVCLASKLPVVAI-----G 462 (514)
Q Consensus 393 ~~~~~~~~~~~ig~s~~~----~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~-~~l~~~~~~~~~pv~a~-----G 462 (514)
.|+++.+ .+.++.|.+.|+|.+.+.|-+.. |+ +.-++ ++++.+.+..++||+.- -
T Consensus 86 -----------aGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~--~~--s~~~l~~~f~~va~a~~lPiilYn~P~~t 150 (306)
T 1o5k_A 86 -----------VGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYN--KP--TQEGLYQHYKYISERTDLGIVVYNVPGRT 150 (306)
T ss_dssp -----------EECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSS--CC--CHHHHHHHHHHHHTTCSSCEEEEECHHHH
T ss_pred -----------EcCCCccHHHHHHHHHHHHhcCCCEEEECCCCCC--CC--CHHHHHHHHHHHHHhCCCCEEEEeCcccc
Confidence 3333333 33355666777777766443321 22 11232 56666666666776654 2
Q ss_pred C--CCcccHHHHH
Q 010240 463 G--IGISNASDVM 473 (514)
Q Consensus 463 G--i~~~~~~~~~ 473 (514)
| ++++.+.++.
T Consensus 151 g~~l~~~~~~~La 163 (306)
T 1o5k_A 151 GVNVLPETAARIA 163 (306)
T ss_dssp SCCCCHHHHHHHH
T ss_pred CcCCCHHHHHHHH
Confidence 3 3455565555
No 385
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=82.56 E-value=6.7 Score=38.27 Aligned_cols=102 Identities=19% Similarity=0.260 Sum_probs=59.6
Q ss_pred HHhCCCCEEEEEcCCCC-------HHH---HHHHHHHHHHHHhhcCceEEEc--------CcHHHHHhCCCCeEEeCCC-
Q 010240 327 ALEGGATIIQLREKDAD-------TRG---FLEAAKACLQICCVHGVPLLIN--------DRIDIALACDADGVHLGQS- 387 (514)
Q Consensus 327 ~~~~Gv~~v~lr~~~~~-------~~~---~~~~~~~~~~~~~~~~~~l~v~--------~~~~~a~~~ga~gvhl~~~- 387 (514)
+-..|++.+++....+. ..+ +.+.+++ +.+..+.++++- +..+.+.++|+|+|.+...
T Consensus 136 ~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~---vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~~~g 212 (349)
T 1p0k_A 136 VEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQ---ICSRVSVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGYG 212 (349)
T ss_dssp HHHTTCSEEEEEECTTTTC--------CTTHHHHHHH---HHHHCSSCEEEEEESSCCCHHHHHHHHHHTCSEEEEEC--
T ss_pred HHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHH---HHHHcCCCEEEEecCCCCCHHHHHHHHHcCCCEEEEcCCC
Confidence 33578999988765321 111 2333333 344557777763 1345667889999987421
Q ss_pred --------------------C--CC----HHHHHhhc-CCCcEEEEecCCHHHHHHhhhCCCcEEEecccc
Q 010240 388 --------------------D--MP----ARTARALL-GPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVY 431 (514)
Q Consensus 388 --------------------~--~~----~~~~~~~~-~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf 431 (514)
+ .+ ...+++.. ....+..-..+|.+++.++..+|||.|.+|..|
T Consensus 213 gt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG~~~ 283 (349)
T 1p0k_A 213 GTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQDALDVAKAIALGASCTGMAGHF 283 (349)
T ss_dssp -------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred CcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHcCCCEEEEcHHH
Confidence 0 01 11222222 222333345579999999999999999998544
No 386
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=82.56 E-value=11 Score=30.50 Aligned_cols=88 Identities=17% Similarity=0.207 Sum_probs=62.2
Q ss_pred ecCCHHHHHHhhh---CCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEEECCCC-cccHHHHHHCCCCCCc
Q 010240 407 SCKTPEEAHQAWI---DGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVAIGGIG-ISNASDVMKIGVSNLK 481 (514)
Q Consensus 407 s~~~~~e~~~a~~---~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a~GGi~-~~~~~~~~~~Ga~~~~ 481 (514)
.+.+.+++..... ...|.|++.--.+. .-|++.++++++.. ++||+.+.+-. .+....+++.|++
T Consensus 32 ~~~~~~~a~~~~~~~~~~~dlvi~d~~l~~-------~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~--- 101 (143)
T 3jte_A 32 TASSSTEGLRIFTENCNSIDVVITDMKMPK-------LSGMDILREIKKITPHMAVIILTGHGDLDNAILAMKEGAF--- 101 (143)
T ss_dssp EESSHHHHHHHHHHTTTTCCEEEEESCCSS-------SCHHHHHHHHHHHCTTCEEEEEECTTCHHHHHHHHHTTCS---
T ss_pred EeCCHHHHHHHHHhCCCCCCEEEEeCCCCC-------CcHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHhCcc---
Confidence 4667777766553 57999988765542 23788888888765 68988887664 5667889999999
Q ss_pred eEEEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 482 GVAVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 482 gva~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
++ +...-++.+....+...++..
T Consensus 102 ~~-----l~kp~~~~~l~~~l~~~~~~~ 124 (143)
T 3jte_A 102 EY-----LRKPVTAQDLSIAINNAINRK 124 (143)
T ss_dssp EE-----EESSCCHHHHHHHHHHHHHHH
T ss_pred ee-----EeCCCCHHHHHHHHHHHHHHH
Confidence 65 445556777777777666543
No 387
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=82.54 E-value=8.7 Score=35.51 Aligned_cols=92 Identities=26% Similarity=0.336 Sum_probs=61.6
Q ss_pred EEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEE----CC-C--Cc-------ccHH
Q 010240 405 GVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAI----GG-I--GI-------SNAS 470 (514)
Q Consensus 405 g~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~----GG-i--~~-------~~~~ 470 (514)
=+-|.|++++..|.+.|||-|=+..-.. .+.-......++.+++..++||+++ || - +. +++.
T Consensus 5 Evc~~s~~~a~~A~~~GAdRIELc~~L~----~GGlTPS~g~i~~~~~~~~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~ 80 (256)
T 1twd_A 5 EICCYSMECALTAQQNGADRVELCAAPK----EGGLTPSLGVLKSVRQRVTIPVHPIIRPRGGDFCYSDGEFAAILEDVR 80 (256)
T ss_dssp EEEESSHHHHHHHHHTTCSEEEECBCGG----GTCBCCCHHHHHHHHHHCCSCEEEBCCSSSSCSCCCHHHHHHHHHHHH
T ss_pred EEEeCCHHHHHHHHHcCCCEEEEcCCcc----cCCCCCCHHHHHHHHHHcCCceEEEECCCCCCCcCCHHHHHHHHHHHH
Confidence 3557899999999999999996643221 1111234677888888889999998 44 2 22 3678
Q ss_pred HHHHCCCCCCceEEEeecccCCCCH-HHHHHHHHH
Q 010240 471 DVMKIGVSNLKGVAVVSALFDRECI-LPESKKLHA 504 (514)
Q Consensus 471 ~~~~~Ga~~~~gva~~~~i~~~~~~-~~~~~~~~~ 504 (514)
.++++|++ ||.+| ++.....+ ..+.++|.+
T Consensus 81 ~~~~~Gad---GvV~G-~Lt~dg~iD~~~~~~Li~ 111 (256)
T 1twd_A 81 TVRELGFP---GLVTG-VLDVDGNVDMPRMEKIMA 111 (256)
T ss_dssp HHHHTTCS---EEEEC-CBCTTSSBCHHHHHHHHH
T ss_pred HHHHcCCC---EEEEe-eECCCCCcCHHHHHHHHH
Confidence 89999999 99887 44433222 344444443
No 388
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=82.51 E-value=1.1 Score=46.29 Aligned_cols=76 Identities=16% Similarity=0.118 Sum_probs=56.6
Q ss_pred cEEEEecC----CHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEEECCCCcccHHHHHHCC
Q 010240 402 KIIGVSCK----TPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVAIGGIGISNASDVMKIG 476 (514)
Q Consensus 402 ~~ig~s~~----~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a~GGi~~~~~~~~~~~G 476 (514)
..+|+++. +.+.+..+.+.|+|+|.+..-.+ ....-++.++++++.+ ++||++-+..+.+.+..+.++|
T Consensus 220 L~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a~g------~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aG 293 (496)
T 4fxs_A 220 LRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHG------HSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAG 293 (496)
T ss_dssp BCCEEECCSSSCCHHHHHHHHHTTCSEEEEECSCT------TSHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHT
T ss_pred eeeeeeeccccchHHHHHHHHhccCceEEeccccc------cchHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhC
Confidence 34444443 57788888999999997764322 1112357889998887 8999985566789999999999
Q ss_pred CCCCceEEEe
Q 010240 477 VSNLKGVAVV 486 (514)
Q Consensus 477 a~~~~gva~~ 486 (514)
++ +|.++
T Consensus 294 aD---~I~Vg 300 (496)
T 4fxs_A 294 VS---AVKVG 300 (496)
T ss_dssp CS---EEEEC
T ss_pred CC---EEEEC
Confidence 99 99875
No 389
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=82.34 E-value=8.2 Score=36.96 Aligned_cols=66 Identities=17% Similarity=0.083 Sum_probs=42.5
Q ss_pred CCHHHHHHHHHhCCCCEEEEEc-----CCCCHHHHHHHHHHHHHHHhhcCceEEEcC----------cHHHHHhCCCCeE
Q 010240 318 RSITDAVKAALEGGATIIQLRE-----KDADTRGFLEAAKACLQICCVHGVPLLIND----------RIDIALACDADGV 382 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~----------~~~~a~~~ga~gv 382 (514)
+.+.+.++.+++.|++.+.+-- ..++.+|..++++...+.+. -++++++.- ..+.|.++|+|++
T Consensus 29 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg~~~t~~ai~la~~A~~~Gadav 107 (309)
T 3fkr_A 29 ASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVA-GRVPVIVTTSHYSTQVCAARSLRAQQLGAAMV 107 (309)
T ss_dssp HHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhC-CCCcEEEecCCchHHHHHHHHHHHHHcCCCEE
Confidence 5577888889999999888732 35678887777776665542 246666521 1234445566666
Q ss_pred Ee
Q 010240 383 HL 384 (514)
Q Consensus 383 hl 384 (514)
-+
T Consensus 108 lv 109 (309)
T 3fkr_A 108 MA 109 (309)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 390
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=82.27 E-value=2.2 Score=41.05 Aligned_cols=111 Identities=11% Similarity=0.014 Sum_probs=68.1
Q ss_pred CCHHHHHHHHHhCCCC---EEEEEcCCC----------CHHHHHHHHHHHHHHHhhcCceEEEc--C-----c----HHH
Q 010240 318 RSITDAVKAALEGGAT---IIQLREKDA----------DTRGFLEAAKACLQICCVHGVPLLIN--D-----R----IDI 373 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~---~v~lr~~~~----------~~~~~~~~~~~~~~~~~~~~~~l~v~--~-----~----~~~ 373 (514)
+++.+.++.+.+.|++ .|++-...+ +.+...+.++++++.+ +.++++- . + .+.
T Consensus 106 ~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~---~~Pv~vK~~~~~~~~~~~~~a~~ 182 (314)
T 2e6f_A 106 EENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAY---GLPFGVKMPPYFDIAHFDTAAAV 182 (314)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHH---CSCEEEEECCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhc---CCCEEEEECCCCCHHHHHHHHHH
Confidence 4677778888888899 899965422 3444455555555433 5666541 1 2 334
Q ss_pred HHhCC-CCeEEeCCCC----------------------------------CCHHHHHhhc-CCCcEEEEecCCHHHHHHh
Q 010240 374 ALACD-ADGVHLGQSD----------------------------------MPARTARALL-GPDKIIGVSCKTPEEAHQA 417 (514)
Q Consensus 374 a~~~g-a~gvhl~~~~----------------------------------~~~~~~~~~~-~~~~~ig~s~~~~~e~~~a 417 (514)
+.++| +|++++.... .....+++.. ....+..-.++|.+++.++
T Consensus 183 ~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~~~~da~~~ 262 (314)
T 2e6f_A 183 LNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGCGGVYSGEDAFLH 262 (314)
T ss_dssp HHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHH
T ss_pred HHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEECCCCCHHHHHHH
Confidence 56789 9999765421 0011223333 2223333355799999999
Q ss_pred hhCCCcEEEecccc
Q 010240 418 WIDGANYIGCGGVY 431 (514)
Q Consensus 418 ~~~g~d~v~~~~vf 431 (514)
...|||.|.+|.-+
T Consensus 263 l~~GAd~V~ig~~~ 276 (314)
T 2e6f_A 263 ILAGASMVQVGTAL 276 (314)
T ss_dssp HHHTCSSEEECHHH
T ss_pred HHcCCCEEEEchhh
Confidence 99999999998544
No 391
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=82.25 E-value=11 Score=34.90 Aligned_cols=127 Identities=15% Similarity=0.130 Sum_probs=77.1
Q ss_pred cHHHHHhCCCCeEEeCCCC------CCHH----HHHhhcCCCcEEEEecC-CHHH-------------HHHhh-hC-CCc
Q 010240 370 RIDIALACDADGVHLGQSD------MPAR----TARALLGPDKIIGVSCK-TPEE-------------AHQAW-ID-GAN 423 (514)
Q Consensus 370 ~~~~a~~~ga~gvhl~~~~------~~~~----~~~~~~~~~~~ig~s~~-~~~e-------------~~~a~-~~-g~d 423 (514)
.+....++|+++|-++.+. .... +++..+..++.+.+-+. +.+| +..+. .. +.+
T Consensus 80 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~ 159 (257)
T 2yc6_A 80 SVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIFCVGETLDERKANRTMEVNIAQLEALGKELGESK 159 (257)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHTTCH
T ss_pred CHHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCChh
Confidence 4667778888888776532 1112 34444556777766665 4544 11121 12 334
Q ss_pred ------EEEeccccCCCCCCCCccCCH----HHHHHHHHc-------CCCCEEEECCCCcccHHHHHHC-CCCCCceEEE
Q 010240 424 ------YIGCGGVYPTNTKANNLTVGL----DGLKTVCLA-------SKLPVVAIGGIGISNASDVMKI-GVSNLKGVAV 485 (514)
Q Consensus 424 ------~v~~~~vf~t~~k~~~~~~g~----~~l~~~~~~-------~~~pv~a~GGi~~~~~~~~~~~-Ga~~~~gva~ 485 (514)
+|.+=|++.-.|...+++-.. ..++.+... -.++|+==|+++++|+.++++. ++| |+-+
T Consensus 160 ~~~~~vvIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diD---G~LV 236 (257)
T 2yc6_A 160 MLWKEVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKWFVEKVAAEGAQHIRIIYGGSANGSNNEKLGQCPNID---GFLV 236 (257)
T ss_dssp HHHHTEEEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEESSCCTTTHHHHHTSTTCC---EEEE
T ss_pred hccCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccceEEEcCccCHHHHHHHHcCCCCC---eeee
Confidence 677778887555433322111 223333211 1589999999999999999987 666 9999
Q ss_pred eecccCCCCHHHHHH
Q 010240 486 VSALFDRECILPESK 500 (514)
Q Consensus 486 ~~~i~~~~~~~~~~~ 500 (514)
|++-++++ ..+.++
T Consensus 237 GgAsL~a~-F~~Ii~ 250 (257)
T 2yc6_A 237 GGASLKPE-FMTMID 250 (257)
T ss_dssp SGGGGSTH-HHHHHH
T ss_pred cHHHHHHH-HHHHHH
Confidence 99999765 444443
No 392
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=82.14 E-value=11 Score=30.51 Aligned_cols=89 Identities=16% Similarity=0.073 Sum_probs=62.1
Q ss_pred EecCCHHHHHHhh-hCCCcEEEeccccCCCCCCCCccCCHHHHHHHHH--c-CCCCEEEECCC-CcccHHHHHHCCCCCC
Q 010240 406 VSCKTPEEAHQAW-IDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCL--A-SKLPVVAIGGI-GISNASDVMKIGVSNL 480 (514)
Q Consensus 406 ~s~~~~~e~~~a~-~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~--~-~~~pv~a~GGi-~~~~~~~~~~~Ga~~~ 480 (514)
..+.+.+++.... +...|.|++..-.+. .-|++.++++++ . .++||+++.+- +.+.+..++++|++
T Consensus 35 ~~~~~~~~a~~~l~~~~~dlii~D~~l~~-------~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~ga~-- 105 (144)
T 3kht_A 35 EFVDNGAKALYQVQQAKYDLIILDIGLPI-------ANGFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMAAGAS-- 105 (144)
T ss_dssp EEESSHHHHHHHHTTCCCSEEEECTTCGG-------GCHHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHHTTCS--
T ss_pred EEECCHHHHHHHhhcCCCCEEEEeCCCCC-------CCHHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHHcCCC--
Confidence 4566777776655 455899988754441 237889999987 3 37898888775 46777889999999
Q ss_pred ceEEEeecccCCC-CHHHHHHHHHHHHHHH
Q 010240 481 KGVAVVSALFDRE-CILPESKKLHAVLMDA 509 (514)
Q Consensus 481 ~gva~~~~i~~~~-~~~~~~~~~~~~~~~~ 509 (514)
++ +.... ++.+....+...+++.
T Consensus 106 -~~-----l~Kp~~~~~~l~~~i~~~l~~~ 129 (144)
T 3kht_A 106 -SV-----VDKSSNNVTDFYGRIYAIFSYW 129 (144)
T ss_dssp -EE-----EECCTTSHHHHHHHHHHHHHHH
T ss_pred -EE-----EECCCCcHHHHHHHHHHHHHHH
Confidence 65 34455 6666666666666653
No 393
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=82.13 E-value=1.6 Score=40.54 Aligned_cols=129 Identities=12% Similarity=0.107 Sum_probs=76.1
Q ss_pred cHHHHHhCCCCeEEeCCCCC------CH----HHHHhhcCCCcEEEEecC-CHHH-------------HHHhh-hCCCc-
Q 010240 370 RIDIALACDADGVHLGQSDM------PA----RTARALLGPDKIIGVSCK-TPEE-------------AHQAW-IDGAN- 423 (514)
Q Consensus 370 ~~~~a~~~ga~gvhl~~~~~------~~----~~~~~~~~~~~~ig~s~~-~~~e-------------~~~a~-~~g~d- 423 (514)
.+....++|+++|-++.+.. .. .+++..+..++.+.+-+. +.+| +..+. ..+.+
T Consensus 81 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~ 160 (256)
T 1aw2_A 81 SPAMLKEFGATHIIIGHSERREYHAESDEFVAKKFAFLKENGLTPVLCIGESDAQNEAGETMAVCARQLDAVINTQGVEA 160 (256)
T ss_dssp CHHHHHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHCGGG
T ss_pred CHHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHH
Confidence 35566677777776655321 11 123334445666666665 4443 11111 23445
Q ss_pred ----EEEeccccCCCCCCCCccCCH----HHHHHHHHcC------CCCEEEECCCCcccHHHHHHC-CCCCCceEEEeec
Q 010240 424 ----YIGCGGVYPTNTKANNLTVGL----DGLKTVCLAS------KLPVVAIGGIGISNASDVMKI-GVSNLKGVAVVSA 488 (514)
Q Consensus 424 ----~v~~~~vf~t~~k~~~~~~g~----~~l~~~~~~~------~~pv~a~GGi~~~~~~~~~~~-Ga~~~~gva~~~~ 488 (514)
+|.+=|++.-.|...+++-.. ..++.+...+ .++|+==|+++++|+.++++. ++| |+-+|++
T Consensus 161 ~~~vvIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diD---G~LVGgA 237 (256)
T 1aw2_A 161 LEGAIIAYEPIWAIGTGKAATAEDAQRIHAQIRAHIAEKSEAVAKNVVIQYGGSVKPENAAAYFAQPDID---GALVGGA 237 (256)
T ss_dssp GTTCEEEECCTTTTTSSCCCCHHHHHHHHHHHHHHHHTTCHHHHHHCEEEECSCCCTTTHHHHTTSTTCC---EEEESGG
T ss_pred cCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCHHHHHHHHcCCCCC---eeeecHH
Confidence 787778887555333322111 2233332111 478999999999999999987 666 9999999
Q ss_pred ccCCCCHHHHHHH
Q 010240 489 LFDRECILPESKK 501 (514)
Q Consensus 489 i~~~~~~~~~~~~ 501 (514)
-++++++.+.++.
T Consensus 238 sL~a~~F~~Ii~~ 250 (256)
T 1aw2_A 238 ALDAKSFAAIAKA 250 (256)
T ss_dssp GGCHHHHHHHHHH
T ss_pred HhChHHHHHHHHH
Confidence 9977666655543
No 394
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=82.05 E-value=7.1 Score=37.09 Aligned_cols=49 Identities=6% Similarity=0.014 Sum_probs=34.2
Q ss_pred CCHHHHHHHHHh-CCCCEEEEE-----cCCCCHHHHHHHHHHHHHHHhhcCceEEE
Q 010240 318 RSITDAVKAALE-GGATIIQLR-----EKDADTRGFLEAAKACLQICCVHGVPLLI 367 (514)
Q Consensus 318 ~~~~~~~~~~~~-~Gv~~v~lr-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~v 367 (514)
+.+.+.++.+++ .|++.+.+- ...++.+|..++++...+.+.. ++++++
T Consensus 24 ~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpvia 78 (293)
T 1f6k_A 24 KGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKD-QIALIA 78 (293)
T ss_dssp HHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSEEEE
T ss_pred HHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEE
Confidence 457788888999 999998873 3567788887777766655432 355554
No 395
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=81.98 E-value=1.6 Score=43.65 Aligned_cols=69 Identities=14% Similarity=0.101 Sum_probs=49.9
Q ss_pred CCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCCcccHHHHHHCCCCCCceEEEe
Q 010240 409 KTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGISNASDVMKIGVSNLKGVAVV 486 (514)
Q Consensus 409 ~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~ 486 (514)
.+.+.+..+.+.|+|+|.+..-+. .+..-++.++++++.+++||++-+-.+.+.+..+.++|++ +|.++
T Consensus 144 ~~~e~~~~lveaGvdvIvldta~G------~~~~~~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~~aGAD---~I~vG 212 (400)
T 3ffs_A 144 NEIERAKLLVEAGVDVIVLDSAHG------HSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGAD---GIKVG 212 (400)
T ss_dssp C-CHHHHHHHHHTCSEEEECCSCC------SBHHHHHHHHHHHTTCCCEEEEEEECSHHHHHHHHHTTCS---EEEEC
T ss_pred CHHHHHHHHHHcCCCEEEEeCCCC------CcccHHHHHHHHHhcCCCeEEEeecCCHHHHHHHHHcCCC---EEEEe
Confidence 346778888899999997742121 1111257788888877899987444568889999999999 99884
No 396
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=81.98 E-value=15 Score=36.73 Aligned_cols=77 Identities=13% Similarity=0.010 Sum_probs=57.5
Q ss_pred cCCHHHHHHhh--------hCCCcE-------EE--eccccCCCCCCCCccCCHHHHHHHHHcCCCC-EEE--ECC--CC
Q 010240 408 CKTPEEAHQAW--------IDGANY-------IG--CGGVYPTNTKANNLTVGLDGLKTVCLASKLP-VVA--IGG--IG 465 (514)
Q Consensus 408 ~~~~~e~~~a~--------~~g~d~-------v~--~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~p-v~a--~GG--i~ 465 (514)
..+|+|+..-. +.|+|. +. +|..|-.. +.+.+.++.++++++.+++| ++. =|| ++
T Consensus 187 ~T~PeeA~~Fve~~~~~~~~tGvd~~~~~vi~LAV~iGt~HG~y---~~~~ld~e~l~~I~~~v~~P~LVle~HGgSg~~ 263 (420)
T 2fiq_A 187 ITHVEDAANTLRTHQKAFIARGLTEALTRVIAIVVQPGVEFDHS---NIIHYQPQEAQALAQWIENTRMVYEAHSTDYQT 263 (420)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTCHHHHHTEEEEECCCSCEECSS---CEECCCGGGGHHHHHHHTTSSCEEEESCCTTCC
T ss_pred CCCHHHHHHHHHHHHHHHHhhCCCcccccceEEEEeCCccCCCC---CCCCcCHHHHHHHHHhcCCCCEEEecCCCCCCC
Confidence 35799987755 589999 55 46655543 23557889999999988889 665 344 56
Q ss_pred cccHHHHHHCCCCCCceEEEeeccc
Q 010240 466 ISNASDVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 466 ~~~~~~~~~~Ga~~~~gva~~~~i~ 490 (514)
.+++.++.+.|+. -+=++..+.
T Consensus 264 ~e~l~~~v~~Gi~---kiNV~t~l~ 285 (420)
T 2fiq_A 264 RTAYWELVRDHFA---ILKVGPALT 285 (420)
T ss_dssp HHHHHHHHHTTEE---EEEECHHHH
T ss_pred HHHHHHHHHcCCC---EEEECHHHH
Confidence 8899999999888 887777765
No 397
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=81.94 E-value=20 Score=29.39 Aligned_cols=88 Identities=11% Similarity=0.009 Sum_probs=62.7
Q ss_pred ecCCHHHHHHhh-hCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEEECCCC-cccHHHHHHCC-CCCCce
Q 010240 407 SCKTPEEAHQAW-IDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVAIGGIG-ISNASDVMKIG-VSNLKG 482 (514)
Q Consensus 407 s~~~~~e~~~a~-~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a~GGi~-~~~~~~~~~~G-a~~~~g 482 (514)
.+.+.+++.... +...|.|++.--.+. .-|++.++++++.. ++||+.+.+-. .+....+++.| ++ +
T Consensus 43 ~~~~~~~a~~~l~~~~~dlvi~D~~l~~-------~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~---~ 112 (153)
T 3hv2_A 43 FARDATQALQLLASREVDLVISAAHLPQ-------MDGPTLLARIHQQYPSTTRILLTGDPDLKLIAKAINEGEIY---R 112 (153)
T ss_dssp EESSHHHHHHHHHHSCCSEEEEESCCSS-------SCHHHHHHHHHHHCTTSEEEEECCCCCHHHHHHHHHTTCCS---E
T ss_pred EECCHHHHHHHHHcCCCCEEEEeCCCCc-------CcHHHHHHHHHhHCCCCeEEEEECCCCHHHHHHHHhCCCcc---e
Confidence 577888766544 566899988754442 23788899988765 78998888765 56678899999 88 5
Q ss_pred EEEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 483 VAVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 483 va~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
+ +...-++.+....+...++..
T Consensus 113 ~-----l~KP~~~~~l~~~i~~~l~~~ 134 (153)
T 3hv2_A 113 Y-----LSKPWDDQELLLALRQALEHQ 134 (153)
T ss_dssp E-----ECSSCCHHHHHHHHHHHHHHH
T ss_pred E-----EeCCCCHHHHHHHHHHHHHHh
Confidence 4 445567777777777766643
No 398
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=81.88 E-value=18 Score=33.40 Aligned_cols=128 Identities=13% Similarity=0.036 Sum_probs=76.2
Q ss_pred cHHHHHhCCCCeEEeCCCCC------CHH----HHHhhcCCCcEEEEecC-CHHHH-------------HHhh-hC----
Q 010240 370 RIDIALACDADGVHLGQSDM------PAR----TARALLGPDKIIGVSCK-TPEEA-------------HQAW-ID---- 420 (514)
Q Consensus 370 ~~~~a~~~ga~gvhl~~~~~------~~~----~~~~~~~~~~~ig~s~~-~~~e~-------------~~a~-~~---- 420 (514)
.+....++|+++|-++.+.. ... +.+..+..++.+.+-+. +.+|- ..+. ..
T Consensus 80 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~ 159 (251)
T 2vxn_A 80 SMPILKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSAIAAKLTKDA 159 (251)
T ss_dssp BHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCTGG
T ss_pred CHHHHHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHHHHhcCCHHH
Confidence 46667777888887765321 111 33444556777776665 44432 1211 11
Q ss_pred -CCcEEEeccccCCCCCCCCccCCH----HHHHHHHH-cC------CCCEEEECCCCcccHHHHHHCCCCCCceEEEeec
Q 010240 421 -GANYIGCGGVYPTNTKANNLTVGL----DGLKTVCL-AS------KLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSA 488 (514)
Q Consensus 421 -g~d~v~~~~vf~t~~k~~~~~~g~----~~l~~~~~-~~------~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~ 488 (514)
.-.+|.+=|+..-.|...+++-.. ..++.+.. .+ .++|+==|+++++|+.+++..- +|||+-+|++
T Consensus 160 ~~~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~--diDG~LVGgA 237 (251)
T 2vxn_A 160 WNQVVLAYEPVWAIGTGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANAATLYAKP--DINGFLVGGA 237 (251)
T ss_dssp GGGEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEEESSCCTTTHHHHHTST--TCCEEEESGG
T ss_pred hCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCcCHhHHHHHhcCC--CCCeeeecHH
Confidence 124677778877554332321111 22332221 11 4899999999999999988742 4459999999
Q ss_pred ccCCCCHHHHHH
Q 010240 489 LFDRECILPESK 500 (514)
Q Consensus 489 i~~~~~~~~~~~ 500 (514)
-++ +++.+.++
T Consensus 238 sL~-~~F~~Ii~ 248 (251)
T 2vxn_A 238 SLK-PEFRDIID 248 (251)
T ss_dssp GGS-TTHHHHHH
T ss_pred HHH-HHHHHHHH
Confidence 999 88877664
No 399
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=81.86 E-value=2.3 Score=43.82 Aligned_cols=68 Identities=19% Similarity=0.142 Sum_probs=53.5
Q ss_pred HHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEEECCCCcccHHHHHHCCCCCCceEEEee
Q 010240 411 PEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVAIGGIGISNASDVMKIGVSNLKGVAVVS 487 (514)
Q Consensus 411 ~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~ 487 (514)
.+.+..+.+.|+|.+.+...+ +....-++.++++++.+ ++||++-++.+.+.+..+.++|++ +|.++.
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~~------G~~~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d---~I~v~~ 307 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTAH------GHSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGAD---AVKVGV 307 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCSC------CSSHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTTCS---EEEECS
T ss_pred HHHHHHHHHhCCCEEEEEecC------CchHHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcCCC---EEEEcC
Confidence 667888889999999875322 11222468899999888 799998778889999999999999 998843
No 400
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=81.86 E-value=8.3 Score=37.24 Aligned_cols=105 Identities=12% Similarity=0.116 Sum_probs=67.6
Q ss_pred CHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEc-C---cHHHHHhCCCCeEEeCC-------C
Q 010240 319 SITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLIN-D---RIDIALACDADGVHLGQ-------S 387 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~-~---~~~~a~~~ga~gvhl~~-------~ 387 (514)
+..+.++.+++.|++.|++-...+ .++ ++.+ +..+.+++.. . ....+.+.|+|++.+.. .
T Consensus 90 ~~~~~~~~~~~~g~d~V~l~~g~p--~~~---~~~l----~~~g~~v~~~v~s~~~a~~a~~~GaD~i~v~g~~~GG~~G 160 (326)
T 3bo9_A 90 WADDLVKVCIEEKVPVVTFGAGNP--TKY---IREL----KENGTKVIPVVASDSLARMVERAGADAVIAEGMESGGHIG 160 (326)
T ss_dssp THHHHHHHHHHTTCSEEEEESSCC--HHH---HHHH----HHTTCEEEEEESSHHHHHHHHHTTCSCEEEECTTSSEECC
T ss_pred CHHHHHHHHHHCCCCEEEECCCCc--HHH---HHHH----HHcCCcEEEEcCCHHHHHHHHHcCCCEEEEECCCCCccCC
Confidence 356788889999999999966532 332 2222 3456766652 2 34456678999887722 1
Q ss_pred CCC-HH---HHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccC
Q 010240 388 DMP-AR---TARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYP 432 (514)
Q Consensus 388 ~~~-~~---~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~ 432 (514)
... .. .+++......+..-...|.+.+.++..+|+|.|.+|.-|-
T Consensus 161 ~~~~~~ll~~i~~~~~iPviaaGGI~~~~dv~~al~~GA~gV~vGs~~~ 209 (326)
T 3bo9_A 161 EVTTFVLVNKVSRSVNIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFV 209 (326)
T ss_dssp SSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred CccHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHhCCCEEEechHHH
Confidence 111 12 2233334455555566789999999999999999987665
No 401
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=81.72 E-value=9.8 Score=37.38 Aligned_cols=58 Identities=21% Similarity=0.256 Sum_probs=38.7
Q ss_pred HHHhCCCCeEEeCCCC------CC---HHHHHhhcCCCcEEEEecCCHHHHHHhhhCC-CcEEEecccc
Q 010240 373 IALACDADGVHLGQSD------MP---ARTARALLGPDKIIGVSCKTPEEAHQAWIDG-ANYIGCGGVY 431 (514)
Q Consensus 373 ~a~~~ga~gvhl~~~~------~~---~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g-~d~v~~~~vf 431 (514)
.+.+.|++++|+.... .+ ...+++.... .+++..--|++++.++.+.| +|+|.+|--+
T Consensus 259 ~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~i-Pvi~~Ggit~~~a~~~l~~g~aD~V~~gR~~ 326 (364)
T 1vyr_A 259 ELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFHG-VIIGAGAYTAEKAEDLIGKGLIDAVAFGRDY 326 (364)
T ss_dssp HHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCS-EEEEESSCCHHHHHHHHHTTSCSEEEESHHH
T ss_pred HHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHCCC-CEEEECCcCHHHHHHHHHCCCccEEEECHHH
Confidence 4457899999997531 12 2244555433 34444434899999999998 9999998544
No 402
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=81.71 E-value=17 Score=35.60 Aligned_cols=56 Identities=13% Similarity=0.041 Sum_probs=39.8
Q ss_pred HhCCCCeEEeCCCC---CCHHHHHhhcCCCcEEEEecCCHHHHHHhhhCC-CcEEEecccc
Q 010240 375 LACDADGVHLGQSD---MPARTARALLGPDKIIGVSCKTPEEAHQAWIDG-ANYIGCGGVY 431 (514)
Q Consensus 375 ~~~ga~gvhl~~~~---~~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g-~d~v~~~~vf 431 (514)
.+.|+|.+|+.... .....+++.... .+++..-.|++++.++.+.| +|+|.+|--+
T Consensus 252 ~~~Gvd~i~v~~~~~~~~~~~~ik~~~~i-Pvi~~Ggit~e~a~~~l~~g~aD~V~iGR~~ 311 (362)
T 4ab4_A 252 GKRGIAFICSREREADDSIGPLIKEAFGG-PYIVNERFDKASANAALASGKADAVAFGVPF 311 (362)
T ss_dssp HHTTCSEEEEECCCCTTCCHHHHHHHHCS-CEEEESSCCHHHHHHHHHTTSCSEEEESHHH
T ss_pred HHhCCCEEEECCCCCCHHHHHHHHHHCCC-CEEEeCCCCHHHHHHHHHcCCccEEEECHHh
Confidence 46799999987643 234556666543 34454444999999999988 9999998544
No 403
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=81.69 E-value=4.8 Score=40.90 Aligned_cols=58 Identities=16% Similarity=0.172 Sum_probs=41.7
Q ss_pred CCCChhHHHHHHHhhcccceEEcCCHHHHHHhhCC--C--------CCCCHHHHHHHHHHHHh-cCCCe
Q 010240 132 VLAGPSTITGLRENLLPMADIVTPNVKEASALLGG--M--------QVVTVADMCSAAKLLHN-LGPRT 189 (514)
Q Consensus 132 ~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~--~--------~~~~~~~~~~~a~~l~~-~g~~~ 189 (514)
.+.+.+....+.+.++|.+|.|-.|+.|+..+++. . .....++..++++.+.+ .+...
T Consensus 285 s~~~~~l~~~i~~~i~p~vDSlGmNEqELa~l~~~lg~~~~s~~~~~~~~i~~v~e~~~~ll~~~~l~r 353 (474)
T 3drw_A 285 SVQDRKLRKKIITNILPFVDSVGIDEAEIAQILSVLGYRELADRIFTYNRLEDSILGGMIILDELNFEI 353 (474)
T ss_dssp CCSCHHHHHHHHHHTGGGSSEEEEEHHHHHHHHHHHTCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCSE
T ss_pred ccccHHHHHHHHHHhcccccccccCHHHHHHHHHHhcCCccchhhhcCCCHHHHHHHHHHHHHHcCCCE
Confidence 46778888888889999999999999999988751 1 12345566777777754 34443
No 404
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=81.67 E-value=6.7 Score=38.60 Aligned_cols=106 Identities=12% Similarity=0.104 Sum_probs=66.3
Q ss_pred CHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEE--cC--cHHHHHhCCCCeEEe-CC------C
Q 010240 319 SITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLI--ND--RIDIALACDADGVHL-GQ------S 387 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v--~~--~~~~a~~~ga~gvhl-~~------~ 387 (514)
.+.+.++.+++.|+++|++-...++.+ .+++++ ..+.++++ +. ....+.+.|+|++.+ +. .
T Consensus 110 ~~~~~~~~~~~~g~~~V~~~~g~~~~~----~i~~~~----~~g~~v~~~v~t~~~a~~a~~~GaD~i~v~g~~~GGh~g 181 (369)
T 3bw2_A 110 GYDAKLAVLLDDPVPVVSFHFGVPDRE----VIARLR----RAGTLTLVTATTPEEARAVEAAGADAVIAQGVEAGGHQG 181 (369)
T ss_dssp THHHHHHHHHHSCCSEEEEESSCCCHH----HHHHHH----HTTCEEEEEESSHHHHHHHHHTTCSEEEEECTTCSEECC
T ss_pred cHHHHHHHHHhcCCCEEEEeCCCCcHH----HHHHHH----HCCCeEEEECCCHHHHHHHHHcCCCEEEEeCCCcCCcCC
Confidence 356788889999999999976554422 223332 34666654 22 344567889999877 21 1
Q ss_pred C-----------CC-HH---HHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccC
Q 010240 388 D-----------MP-AR---TARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYP 432 (514)
Q Consensus 388 ~-----------~~-~~---~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~ 432 (514)
. .. .. .+++......+..-...|++.+.++.+.|+|.|.+|.-|-
T Consensus 182 ~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaaGGI~~~~~~~~~l~~GAd~V~vGs~~~ 241 (369)
T 3bw2_A 182 THRDSSEDDGAGIGLLSLLAQVREAVDIPVVAAGGIMRGGQIAAVLAAGADAAQLGTAFL 241 (369)
T ss_dssp CSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred CcccccccccccccHHHHHHHHHHhcCceEEEECCCCCHHHHHHHHHcCCCEEEEChHHh
Confidence 0 12 22 2232333344444445699999999999999999986664
No 405
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=81.58 E-value=6.6 Score=37.73 Aligned_cols=48 Identities=13% Similarity=0.095 Sum_probs=34.6
Q ss_pred CCHHHHHHHHHhCCCCEEEEEc-----CCCCHHHHHHHHHHHHHHHhhcCceEEE
Q 010240 318 RSITDAVKAALEGGATIIQLRE-----KDADTRGFLEAAKACLQICCVHGVPLLI 367 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~v 367 (514)
+.+.+.++.+++.|++.+.+-- ..++.+|..++++...+.+ -++++++
T Consensus 29 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~--grvpVia 81 (313)
T 3dz1_A 29 VSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA--KSMQVIV 81 (313)
T ss_dssp HHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC--TTSEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc--CCCcEEE
Confidence 4577888889999999987732 3567888777777666655 3566665
No 406
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=81.57 E-value=9.9 Score=35.22 Aligned_cols=181 Identities=16% Similarity=0.162 Sum_probs=112.0
Q ss_pred CHHHHHHHHHhCCCCE--EEEEcCC--CCHHHHHHHHHHHHHHHhhcCceEEEc-----CcHHHHHhCCCCeEEeCCCC-
Q 010240 319 SITDAVKAALEGGATI--IQLREKD--ADTRGFLEAAKACLQICCVHGVPLLIN-----DRIDIALACDADGVHLGQSD- 388 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~--v~lr~~~--~~~~~~~~~~~~~~~~~~~~~~~l~v~-----~~~~~a~~~ga~gvhl~~~~- 388 (514)
+..+....+..+|++. +++|+.. ..+.+... +++.+ ..++-+. +-+++|.+...+.|-|-...
T Consensus 54 Dpv~aA~~ae~aGAdGITvHlReDrRHI~d~Dv~~----L~~~i---~t~lNlEma~t~emi~ial~~kP~~vtLVPEkr 126 (278)
T 3gk0_A 54 DPVRAALAAEDAGADAITLHLREDRRHIVDADVRT----LRPRV---KTRMNLECAVTPEMLDIACEIRPHDACLVPEKR 126 (278)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCTTCSSSCHHHHHH----HHHHC---SSCEEEEECSSHHHHHHHHHHCCSEEEECCCSG
T ss_pred CHHHHHHHHHHcCCCEEEeccCCCcccCCHHHHHH----HHHHc---CCCEEeecCCCHHHHHHHHHcCCCEEEECCCCC
Confidence 5667777788999987 5667753 33444332 33333 2344332 35678888888888664332
Q ss_pred --------CC--------HHHHHhhcCCCcEEEEecC-CHHHHHHhhhCCCcEEEe--ccccCCCCCCCCccCCHHHHHH
Q 010240 389 --------MP--------ARTARALLGPDKIIGVSCK-TPEEAHQAWIDGANYIGC--GGVYPTNTKANNLTVGLDGLKT 449 (514)
Q Consensus 389 --------~~--------~~~~~~~~~~~~~ig~s~~-~~~e~~~a~~~g~d~v~~--~~vf~t~~k~~~~~~g~~~l~~ 449 (514)
++ ...+.++...+..+.+-+. +++++..|.+.|+|+|=+ |++-....+.. ...-++.+..
T Consensus 127 eE~TTegGlDv~~~~~~L~~~i~~L~~~GIrVSLFIDpd~~qI~aA~~~GAd~IELhTG~YA~a~~~~~-~~~el~rl~~ 205 (278)
T 3gk0_A 127 SELTTEGGLDVVGHFDAVRAACKQLADAGVRVSLFIDPDEAQIRAAHETGAPVIELHTGRYADAHDAAE-QQREFERIAT 205 (278)
T ss_dssp GGBCSSSSBCTTTTHHHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHTCSEEEECCHHHHTCSSHHH-HHHHHHHHHH
T ss_pred CCcCCCcchhhhccHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCcCEEEEecchhhccCCchh-HHHHHHHHHH
Confidence 11 1123445556777777775 789999999999999977 33222111000 0012333433
Q ss_pred HH---HcCCCCEEEECCCCcccHHHHHHCCCCCCceEEEeecccCC---CCHHHHHHHHHHHHHHH
Q 010240 450 VC---LASKLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSALFDR---ECILPESKKLHAVLMDA 509 (514)
Q Consensus 450 ~~---~~~~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~~~---~~~~~~~~~~~~~~~~~ 509 (514)
.. ...++-|-|--|++.+|+..+.+ .-+|.-+-+|-+|... --..++++++++.+.+.
T Consensus 206 aA~~A~~lGL~VnAGHGL~y~Nv~~ia~--ip~i~ElnIGHaiIa~Al~~Gl~~AVr~mk~lm~~a 269 (278)
T 3gk0_A 206 GVDAGIALGLKVNAGHGLHYTNVQAIAA--LPGIAELNIGHAIVAHAVFVGWDNAVREMKAIMVAA 269 (278)
T ss_dssp HHHHHHHTTCEEEECTTCCTTTHHHHHT--CTTEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEecCCCCCHHHHHHHHh--CCCCeEEecCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 33 23589999999999999998754 3344477787777632 24567888888888764
No 407
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=81.57 E-value=28 Score=33.73 Aligned_cols=163 Identities=10% Similarity=0.058 Sum_probs=88.8
Q ss_pred HHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcC---ceEEE--cC----cHHHHHhCCCCeEEeCCCCCCHH
Q 010240 322 DAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHG---VPLLI--ND----RIDIALACDADGVHLGQSDMPAR 392 (514)
Q Consensus 322 ~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~---~~l~v--~~----~~~~a~~~ga~gvhl~~~~~~~~ 392 (514)
+.++.+...|.++|.+-.-+..... ......+.. +..++ .+++| |+ ++..+++.|++||-+|.-.-...
T Consensus 54 ~~~e~a~~~GaD~vilDlEha~~~~-e~~~~~l~a-~~~~~~~~~~~~VRv~~~~~~di~~~LdaGa~gImlP~V~saee 131 (339)
T 1izc_A 54 FVTKVLAATKPDFVWIDVEHGMFNR-LELHDAIHA-AQHHSEGRSLVIVRVPKHDEVSLSTALDAGAAGIVIPHVETVEE 131 (339)
T ss_dssp HHHHHHHHTCCSEEEEETTTSCCCH-HHHHHHHHH-HHHHTTTCSEEEEECCTTCHHHHHHHHHHTCSEEEETTCCCHHH
T ss_pred HHHHHHHhCCCCEEEEECCCCCCcH-HHHHHHHHH-hhhcCCCCCeEEEEeCCCCHHHHHHHHhCCCCEEEeCCCCCHHH
Confidence 4677888899999999765443221 122233332 23233 45554 32 35566788999999988654211
Q ss_pred --HHHhhcC-----------------------------------CCcEEEEecCCHHHHHHhh----hCCCcEEEecccc
Q 010240 393 --TARALLG-----------------------------------PDKIIGVSCKTPEEAHQAW----IDGANYIGCGGVY 431 (514)
Q Consensus 393 --~~~~~~~-----------------------------------~~~~ig~s~~~~~e~~~a~----~~g~d~v~~~~vf 431 (514)
.+.+... ....+++-+-|++-+..+. .-|+|.+++|+-=
T Consensus 132 ~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~~~i~vi~mIEt~~av~nldeIaa~~~vD~l~iG~~D 211 (339)
T 1izc_A 132 VREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQIESVKGVENVDAIAAMPEIHGLMFGPGD 211 (339)
T ss_dssp HHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEECSHHHHHTHHHHHTCTTCCCEEECHHH
T ss_pred HHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcCcCceEEEEEChHHHHHHHHHHhcCCCCCEEEECHHH
Confidence 1111110 0134666666665544333 2379999998752
Q ss_pred CCCCC--CCCccCC----HH---HHHHHH---HcCCCCEEEECCCCcccHHHHHHCCCCCCceEEEeeccc
Q 010240 432 PTNTK--ANNLTVG----LD---GLKTVC---LASKLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 432 ~t~~k--~~~~~~g----~~---~l~~~~---~~~~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~ 490 (514)
-+.+. +....+| .+ .++.+. ...++|+-.. ..+++.+..++..|++ ++.+.+.+.
T Consensus 212 Ls~~~~~~~~~~lG~~~~p~v~~a~~~iv~aaraaGk~~g~~-~~d~~~a~~~~~~Gf~---~l~~~~di~ 278 (339)
T 1izc_A 212 YMIDAGLDLNGALSGVPHPTFVEAMTKFSTAAQRNGVPIFGG-ALSVDMVPSLIEQGYR---AIAVQFDVW 278 (339)
T ss_dssp HHHHTTCCTTCCTTSCCCHHHHHHHHHHHHHHHHTTCCEEEE-CSSGGGHHHHHHTTEE---EEEEEEHHH
T ss_pred HHhhhhcccchhhCCCCCHHHHHHHHHHHHHHHHhCCceeEe-cCCHHHHHHHHHhCCC---EEEecHHHH
Confidence 22210 0000011 22 223332 2347887221 2357889999999999 988877544
No 408
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=81.55 E-value=11 Score=30.48 Aligned_cols=88 Identities=16% Similarity=0.106 Sum_probs=61.0
Q ss_pred ecCCHHHHHHhhh-----------CCCcEEEeccccCCCCCCCCccCCHHHHHHHHHc---CCCCEEEECCCC-cccHHH
Q 010240 407 SCKTPEEAHQAWI-----------DGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLA---SKLPVVAIGGIG-ISNASD 471 (514)
Q Consensus 407 s~~~~~e~~~a~~-----------~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~---~~~pv~a~GGi~-~~~~~~ 471 (514)
.+.+.+++..... ...|.+++.--.+. .-|++.++++++. .++|++.+.+-. .+....
T Consensus 37 ~~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~~-------~~g~~~~~~l~~~~~~~~~~ii~~t~~~~~~~~~~ 109 (149)
T 1k66_A 37 RCITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLPG-------TDGREVLQEIKQDEVLKKIPVVIMTTSSNPKDIEI 109 (149)
T ss_dssp EECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSS-------SCHHHHHHHHTTSTTGGGSCEEEEESCCCHHHHHH
T ss_pred EECCHHHHHHHHHhcccccCcccCCCCcEEEEECCCCC-------CCHHHHHHHHHhCcccCCCeEEEEeCCCCHHHHHH
Confidence 4778888777665 56899988754442 2378888988875 368988887654 567788
Q ss_pred HHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 472 VMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 472 ~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
+++.|++ ++ +...-++.+....+...++..
T Consensus 110 ~~~~g~~---~~-----l~kP~~~~~l~~~i~~~~~~~ 139 (149)
T 1k66_A 110 CYSYSIS---SY-----IVKPLEIDRLTETVQTFIKYW 139 (149)
T ss_dssp HHHTTCS---EE-----EECCSSHHHHHHHHHHHHHHH
T ss_pred HHHCCCC---EE-----EeCCCCHHHHHHHHHHHHHHh
Confidence 9999999 65 334446666666666665544
No 409
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=81.49 E-value=5.6 Score=38.80 Aligned_cols=114 Identities=17% Similarity=0.128 Sum_probs=68.1
Q ss_pred CCHHHHHHHHHhCCCCEEEEE-----cCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHH
Q 010240 318 RSITDAVKAALEGGATIIQLR-----EKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPAR 392 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~ 392 (514)
+.+.+.++.+++.|++.+.+- ...++.+|..++++...+.+.. +++
T Consensus 52 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g-rvp---------------------------- 102 (343)
T 2v9d_A 52 PGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDR-RVP---------------------------- 102 (343)
T ss_dssp HHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSC----------------------------
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCC-CCc----------------------------
Confidence 457788888999999988873 3456777777666655543321 233
Q ss_pred HHHhhcCCCcEEEEecCC----HHHHHHhhhCCCcEEEeccccCCCCCCCCccCCH-HHHHHHHHcCCCCEEEE-----C
Q 010240 393 TARALLGPDKIIGVSCKT----PEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGL-DGLKTVCLASKLPVVAI-----G 462 (514)
Q Consensus 393 ~~~~~~~~~~~ig~s~~~----~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~-~~l~~~~~~~~~pv~a~-----G 462 (514)
.++|+++.+ .+.++.|.+.|+|.+.+.|-+.. |+ +.-++ ++++.+.+..++||+.- -
T Consensus 103 ---------ViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~--~~--s~~~l~~~f~~VA~a~~lPiilYn~P~~t 169 (343)
T 2v9d_A 103 ---------VLIGTGGTNARETIELSQHAQQAGADGIVVINPYYW--KV--SEANLIRYFEQVADSVTLPVMLYNFPALT 169 (343)
T ss_dssp ---------EEEECCSSCHHHHHHHHHHHHHHTCSEEEEECCSSS--CC--CHHHHHHHHHHHHHTCSSCEEEEECHHHH
T ss_pred ---------EEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCC--CC--CHHHHHHHHHHHHHhcCCCEEEEeCchhc
Confidence 344444443 33456677788888766543331 22 11233 66777777777787764 2
Q ss_pred C--CCcccHHHHH
Q 010240 463 G--IGISNASDVM 473 (514)
Q Consensus 463 G--i~~~~~~~~~ 473 (514)
| ++++.+.++.
T Consensus 170 g~~l~~e~~~~La 182 (343)
T 2v9d_A 170 GQDLTPALVKTLA 182 (343)
T ss_dssp SSCCCHHHHHHHH
T ss_pred CcCCCHHHHHHHH
Confidence 4 3456666665
No 410
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=81.41 E-value=3.2 Score=43.16 Aligned_cols=133 Identities=14% Similarity=0.148 Sum_probs=72.2
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcC------------------cHHHHHhCCC
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLIND------------------RIDIALACDA 379 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~------------------~~~~a~~~ga 379 (514)
++....++.+++.|+++|++|.......+- .+.+..+.+..+.++++.- -++.+.+.|+
T Consensus 17 ~~~~~~~~~~~~~g~D~vElRvD~l~~~~~---~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~~~ 93 (523)
T 2o7s_A 17 DKMVIETSKAHELGADLVEIRLDWLKDFNP---LEDLKTIIKKSPLPTLFTYRPKWEGGQYEGDENERRDVLRLAMELGA 93 (523)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEGGGCSSCCH---HHHHHHHHHHCSSCEEEECCBGGGTSSBCSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhhhcCCCEEEEEEecccccCh---HHHHHHHHhcCCCcEEEEecccccCCCCCCCHHHHHHHHHHHHHhCC
Confidence 355666777788899999999975542111 1223333345567777521 1345567788
Q ss_pred CeEEeCCCCCCHHHHH---hhcCCCcEEEEecCC----H--HH----HHHhhhCCCcEEEeccccCCCCCCCCccCCHHH
Q 010240 380 DGVHLGQSDMPARTAR---ALLGPDKIIGVSCKT----P--EE----AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDG 446 (514)
Q Consensus 380 ~gvhl~~~~~~~~~~~---~~~~~~~~ig~s~~~----~--~e----~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~ 446 (514)
+.|-+.-... ....+ ...+.+..+..|.|+ + +| ..++.+.|+|++ ++-.+.... -..-.
T Consensus 94 ~yiDvEl~~~-~~~~~~~~~~~~~~~kiI~S~H~f~~tp~~~~~~~~~~~~~~~gaDiv---Kia~~a~~~----~D~~~ 165 (523)
T 2o7s_A 94 DYIDVELQVA-SEFIKSIDGKKPGKFKVIVSSHNYQNTPSVEDLDGLVARIQQTGADIV---KIATTAVDI----ADVAR 165 (523)
T ss_dssp SEEEEEHHHH-HHHHHHTTTCCCTTCEEEEEEECSSCCCCHHHHHHHHHHHHTTTCSEE---EEEEECSSG----GGHHH
T ss_pred CEEEEECCCc-hHHHHHHHHhccCCCEEEEEcccCCCCcCHHHHHHHHHHHHHhCCCEE---EEEecCCCH----HHHHH
Confidence 8876532211 11111 122224566778884 3 34 446778999999 544432211 12333
Q ss_pred HHHHHHcCCCCEEEE
Q 010240 447 LKTVCLASKLPVVAI 461 (514)
Q Consensus 447 l~~~~~~~~~pv~a~ 461 (514)
+..+....+.|++++
T Consensus 166 l~~~~~~~~~p~i~~ 180 (523)
T 2o7s_A 166 MFHITSKAQVPTIGL 180 (523)
T ss_dssp HHHHHHHCSSCEEEE
T ss_pred HHHHHhhcCCCEEEE
Confidence 333444457886654
No 411
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=81.24 E-value=5.6 Score=37.80 Aligned_cols=100 Identities=24% Similarity=0.194 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCCCEEEE-----EcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHHHH
Q 010240 320 ITDAVKAALEGGATIIQL-----REKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPARTA 394 (514)
Q Consensus 320 ~~~~~~~~~~~Gv~~v~l-----r~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~~~ 394 (514)
+.+.++.+++.|++.+.+ -...++.+|..++++...+.+..
T Consensus 25 l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~g---------------------------------- 70 (292)
T 3daq_A 25 LKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDK---------------------------------- 70 (292)
T ss_dssp HHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT----------------------------------
T ss_pred HHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCC----------------------------------
Q ss_pred HhhcCCCcEEEEecCCHHH----HHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEE
Q 010240 395 RALLGPDKIIGVSCKTPEE----AHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVA 460 (514)
Q Consensus 395 ~~~~~~~~~ig~s~~~~~e----~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a 460 (514)
+...++|+++.+..| ++.|.+.|+|.+.+.|-+.....+..- .++++.+.+..++||+.
T Consensus 71 ----rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l---~~~f~~ia~a~~lPiil 133 (292)
T 3daq_A 71 ----RVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGL---VKHFEAIADAVKLPVVL 133 (292)
T ss_dssp ----SSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHH---HHHHHHHHHHHCSCEEE
T ss_pred ----CCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHH---HHHHHHHHHhCCCCEEE
No 412
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=81.21 E-value=6.4 Score=37.84 Aligned_cols=113 Identities=12% Similarity=0.130 Sum_probs=68.1
Q ss_pred CCHHHHHHHHHhCCCCEEEEE-----cCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHH
Q 010240 318 RSITDAVKAALEGGATIIQLR-----EKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPAR 392 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~ 392 (514)
+.+.+.++.+++.|++.+.+- ...++.+|..++++...+.+.. ++++
T Consensus 33 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g-rvpV--------------------------- 84 (314)
T 3d0c_A 33 KGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNG-RATV--------------------------- 84 (314)
T ss_dssp HHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSEE---------------------------
T ss_pred HHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCC-CCeE---------------------------
Confidence 457788888999999998763 3466777777766665544321 2333
Q ss_pred HHHhhcCCCcEEEEecCC----HHHHHHhhhCCCcEEEeccccCCCCCCCCccCCH-HHHHHHHHcCCCCEEEE--CC-C
Q 010240 393 TARALLGPDKIIGVSCKT----PEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGL-DGLKTVCLASKLPVVAI--GG-I 464 (514)
Q Consensus 393 ~~~~~~~~~~~ig~s~~~----~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~-~~l~~~~~~~~~pv~a~--GG-i 464 (514)
++|+++ + .+.++.|.+.|+|.+.+.|-+.. |+. .-++ ++++.+.+..++||+.- -| +
T Consensus 85 ----------iaGvg~-st~~ai~la~~A~~~Gadavlv~~P~y~--~~s--~~~l~~~f~~va~a~~lPiilYn~tg~l 149 (314)
T 3d0c_A 85 ----------VAGIGY-SVDTAIELGKSAIDSGADCVMIHQPVHP--YIT--DAGAVEYYRNIIEALDAPSIIYFKDAHL 149 (314)
T ss_dssp ----------EEEECS-SHHHHHHHHHHHHHTTCSEEEECCCCCS--CCC--HHHHHHHHHHHHHHSSSCEEEEECCTTS
T ss_pred ----------EecCCc-CHHHHHHHHHHHHHcCCCEEEECCCCCC--CCC--HHHHHHHHHHHHHhCCCCEEEEeCCCCc
Confidence 334444 3 33466677888888877543331 221 1233 67777777777887764 23 4
Q ss_pred CcccHHHHH
Q 010240 465 GISNASDVM 473 (514)
Q Consensus 465 ~~~~~~~~~ 473 (514)
+++.+.++.
T Consensus 150 ~~~~~~~La 158 (314)
T 3d0c_A 150 SDDVIKELA 158 (314)
T ss_dssp CTHHHHHHT
T ss_pred CHHHHHHHH
Confidence 555555554
No 413
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=81.15 E-value=5.5 Score=37.76 Aligned_cols=56 Identities=9% Similarity=-0.104 Sum_probs=39.6
Q ss_pred cEEEEecCCHHH----HHHhhhCCCcEEEeccccCCCCC-CCCccCCH-HHHHHHHHcCCCCEEEE
Q 010240 402 KIIGVSCKTPEE----AHQAWIDGANYIGCGGVYPTNTK-ANNLTVGL-DGLKTVCLASKLPVVAI 461 (514)
Q Consensus 402 ~~ig~s~~~~~e----~~~a~~~g~d~v~~~~vf~t~~k-~~~~~~g~-~~l~~~~~~~~~pv~a~ 461 (514)
.+.|+++.+..| ++.|.+.|+|.+.+.|-+.. | + +.-++ ++++.+++..++||+.-
T Consensus 68 ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~--~~~--s~~~l~~~f~~va~a~~lPiilY 129 (288)
T 2nuw_A 68 LIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPYYF--PRL--PEKFLAKYYEEIARISSHSLYIY 129 (288)
T ss_dssp EEEECCCSCHHHHHHHHHHHHTSCCSEEEECCCCSS--CSC--CHHHHHHHHHHHHHHCCSCEEEE
T ss_pred eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCC--CCC--CHHHHHHHHHHHHHhcCCCEEEE
Confidence 777887776444 66788999999988654442 2 2 11243 78888988889998875
No 414
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=81.09 E-value=5.6 Score=37.66 Aligned_cols=56 Identities=21% Similarity=0.234 Sum_probs=39.6
Q ss_pred cEEEEecCCHHH----HHHhhhCCCcEEEeccccCCCCC-CCCccCCH-HHHHHHHHcCCCCEEEE
Q 010240 402 KIIGVSCKTPEE----AHQAWIDGANYIGCGGVYPTNTK-ANNLTVGL-DGLKTVCLASKLPVVAI 461 (514)
Q Consensus 402 ~~ig~s~~~~~e----~~~a~~~g~d~v~~~~vf~t~~k-~~~~~~g~-~~l~~~~~~~~~pv~a~ 461 (514)
.++|+++.+..| ++.|.+.|+|.+.+.|-+.. | + +.-++ ++++.+++..++||+.-
T Consensus 67 vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~--~~~--s~~~l~~~f~~va~a~~lPiilY 128 (286)
T 2r91_A 67 VIVQVASLNADEAIALAKYAESRGAEAVASLPPYYF--PRL--SERQIAKYFRDLCSAVSIPVFLY 128 (286)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCSS--TTC--CHHHHHHHHHHHHHHCSSCEEEE
T ss_pred EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCC--CCC--CHHHHHHHHHHHHHhcCCCEEEE
Confidence 778888776444 66788999999988755442 2 2 11233 78888888888998874
No 415
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=80.83 E-value=2.7 Score=41.93 Aligned_cols=73 Identities=12% Similarity=0.103 Sum_probs=47.9
Q ss_pred HHHHHHhhhC--CCcEEEeccccCCCCCCCCccCCHHHHHHHHHc-----C-CCCEEEECCCCcccHHHHHHCCCCCCce
Q 010240 411 PEEAHQAWID--GANYIGCGGVYPTNTKANNLTVGLDGLKTVCLA-----S-KLPVVAIGGIGISNASDVMKIGVSNLKG 482 (514)
Q Consensus 411 ~~e~~~a~~~--g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~-----~-~~pv~a~GGi~~~~~~~~~~~Ga~~~~g 482 (514)
.+++.++.+. |+|.|-+=..-+- .+. -.+..+++++. + ++.+++.|||+++++.++.+.|++ .
T Consensus 224 ~~~al~~a~~l~~~d~IrlDs~~~~---~gd---~~~~v~~v~~~ld~~G~~~~~I~aSggl~~~~i~~l~~~GvD---~ 294 (398)
T 2i1o_A 224 KFAAIKIAEMFDKVDYIRLDTPSSR---RGN---FEALIREVRWELALRGRSDIKIMVSGGLDENTVKKLREAGAE---A 294 (398)
T ss_dssp HHHHHHHHTTCSCCCEEEECCCGGG---CSC---HHHHHHHHHHHHHHTTCTTSEEEEESSCCHHHHHHHHHTTCC---E
T ss_pred HHHHHHHHHhhcCCcEEEeCCCCCC---ccc---HHHHHHHHHHHHHhCCCCceEEEEeCCCCHHHHHHHHHcCCC---E
Confidence 4555555554 8999965332110 011 12333334321 2 578999999999999999999998 9
Q ss_pred EEEeecccCC
Q 010240 483 VAVVSALFDR 492 (514)
Q Consensus 483 va~~~~i~~~ 492 (514)
+++|+.+.+.
T Consensus 295 ~gvGt~l~~~ 304 (398)
T 2i1o_A 295 FGVGTSISSA 304 (398)
T ss_dssp EEECHHHHTC
T ss_pred EEeCcccCCC
Confidence 9999977643
No 416
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=80.81 E-value=6.1 Score=37.53 Aligned_cols=102 Identities=20% Similarity=0.226 Sum_probs=59.7
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcC-----CCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHH
Q 010240 318 RSITDAVKAALEGGATIIQLREK-----DADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPAR 392 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~ 392 (514)
+.+.+.++.+++.|++.+.+--. .++.+|..++++...+.+.. ++++
T Consensus 22 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pv--------------------------- 73 (291)
T 3tak_A 22 KSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANK-RIPI--------------------------- 73 (291)
T ss_dssp HHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCE---------------------------
T ss_pred HHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCC-CCeE---------------------------
Confidence 45777888888999998877333 44667766666555543321 2333
Q ss_pred HHHhhcCCCcEEEEecCC----HHHHHHhhhCCCcEEEeccccCCCCCCCCccCC-HHHHHHHHHcCCCCEEEE
Q 010240 393 TARALLGPDKIIGVSCKT----PEEAHQAWIDGANYIGCGGVYPTNTKANNLTVG-LDGLKTVCLASKLPVVAI 461 (514)
Q Consensus 393 ~~~~~~~~~~~ig~s~~~----~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g-~~~l~~~~~~~~~pv~a~ 461 (514)
++|+++.+ .+.++.|.+.|+|.+.+.|-+.. |+. .-+ .++++.+.+..++||+.-
T Consensus 74 ----------iaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~--~~~--~~~l~~~f~~ia~a~~lPiilY 133 (291)
T 3tak_A 74 ----------IAGTGANSTREAIELTKAAKDLGADAALLVTPYYN--KPT--QEGLYQHYKAIAEAVELPLILY 133 (291)
T ss_dssp ----------EEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSS--CCC--HHHHHHHHHHHHHHCCSCEEEE
T ss_pred ----------EEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCC--CCC--HHHHHHHHHHHHHhcCCCEEEE
Confidence 33444333 33456677778888776543321 221 112 366777777777777765
No 417
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=80.51 E-value=6.1 Score=37.55 Aligned_cols=56 Identities=21% Similarity=0.068 Sum_probs=39.2
Q ss_pred cEEEEecCCHHH----HHHhhhCCCcEEEeccccCCCCC-CCCccCCH-HHHHHHHHcCCCCEEEE
Q 010240 402 KIIGVSCKTPEE----AHQAWIDGANYIGCGGVYPTNTK-ANNLTVGL-DGLKTVCLASKLPVVAI 461 (514)
Q Consensus 402 ~~ig~s~~~~~e----~~~a~~~g~d~v~~~~vf~t~~k-~~~~~~g~-~~l~~~~~~~~~pv~a~ 461 (514)
.+.|+++.+..| ++.|.+.|+|.+.+.|-+.. | + +.-++ ++++.+.+..++||+.-
T Consensus 68 viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~--~~~--s~~~l~~~f~~va~a~~lPiilY 129 (293)
T 1w3i_A 68 IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAPYYY--PRM--SEKHLVKYFKTLCEVSPHPVYLY 129 (293)
T ss_dssp EEEECCCSCHHHHHHHHHHGGGSCCSEEEEECCCSC--SSC--CHHHHHHHHHHHHHHCSSCEEEE
T ss_pred EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCC--CCC--CHHHHHHHHHHHHhhCCCCEEEE
Confidence 678888776444 66788999999988654432 2 2 11233 78888888888998874
No 418
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=80.50 E-value=7.3 Score=36.25 Aligned_cols=129 Identities=12% Similarity=0.101 Sum_probs=75.3
Q ss_pred cHHHHHhCCCCeEEeCCCCC------CHH----HHHhhcCCCcEEEEecCCHHHHHH---------------hhhC----
Q 010240 370 RIDIALACDADGVHLGQSDM------PAR----TARALLGPDKIIGVSCKTPEEAHQ---------------AWID---- 420 (514)
Q Consensus 370 ~~~~a~~~ga~gvhl~~~~~------~~~----~~~~~~~~~~~ig~s~~~~~e~~~---------------a~~~---- 420 (514)
.+....++|+++|-++.+.. ... +++..+..++.+.+-+....|-++ ....
T Consensus 86 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~ 165 (261)
T 1m6j_A 86 HVGMLVDCQVPYVILGHSERRQIFHESNEQVAEKVKVAIDAGLKVIACIGETEAQRIANQTEEVVAAQLKAINNAISKEA 165 (261)
T ss_dssp BHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHSCTGG
T ss_pred CHHHHHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHHHHhcCCHHH
Confidence 46677788888887766421 111 333444556776666663322222 1112
Q ss_pred -CCcEEEeccccCCCCCCCCccCCH----HHHHHHHH-cC------CCCEEEECCCCcccHHHHHHCCCCCCceEEEeec
Q 010240 421 -GANYIGCGGVYPTNTKANNLTVGL----DGLKTVCL-AS------KLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSA 488 (514)
Q Consensus 421 -g~d~v~~~~vf~t~~k~~~~~~g~----~~l~~~~~-~~------~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~ 488 (514)
.-.+|.+=|+..-.|...+++-.. ..++.+.. .+ .++|+==|+++++|+.+++... +|||+-+|++
T Consensus 166 ~~~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~--diDG~LVGgA 243 (261)
T 1m6j_A 166 WKNIILAYEPVWAIGTGKTATPDQAQEVHQYIRKWMTENISKEVAEATRIQYGGSVNPANCNELAKKA--DIDGFLVGGA 243 (261)
T ss_dssp GGGEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEECSCCCTTTHHHHHTST--TCCEEEESGG
T ss_pred cCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhhChhhcccccEEEcCCcCHhhHHHHhcCC--CCCeeEecHH
Confidence 234677778887554333322111 22332221 11 4899999999999999988742 4459999999
Q ss_pred ccCCCCHHHHHH
Q 010240 489 LFDRECILPESK 500 (514)
Q Consensus 489 i~~~~~~~~~~~ 500 (514)
-++++++.+.++
T Consensus 244 sL~a~~F~~ii~ 255 (261)
T 1m6j_A 244 SLDAAKFKTIIN 255 (261)
T ss_dssp GGSHHHHHHHHG
T ss_pred HhChHHHHHHHH
Confidence 997665555443
No 419
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=80.47 E-value=3.6 Score=37.17 Aligned_cols=109 Identities=13% Similarity=0.050 Sum_probs=62.8
Q ss_pred HHHHHHHhCCCCEEEEEcCCCC-H-HHHHHHHHHHHHHHhhcCceEEEcC----cHHHHHhCCCCeEEeCCC-------C
Q 010240 322 DAVKAALEGGATIIQLREKDAD-T-RGFLEAAKACLQICCVHGVPLLIND----RIDIALACDADGVHLGQS-------D 388 (514)
Q Consensus 322 ~~~~~~~~~Gv~~v~lr~~~~~-~-~~~~~~~~~~~~~~~~~~~~l~v~~----~~~~a~~~ga~gvhl~~~-------~ 388 (514)
+.++.+++.|++.+.+-..... + ....++++.+++.+. +..+.++- ....+.+.|+|.+.+... +
T Consensus 79 ~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~--~~~v~~~~~t~~e~~~~~~~G~d~i~~~~~g~t~~~~~ 156 (223)
T 1y0e_A 79 KEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAP--NVEIMADIATVEEAKNAARLGFDYIGTTLHGYTSYTQG 156 (223)
T ss_dssp HHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCT--TSEEEEECSSHHHHHHHHHTTCSEEECTTTTSSTTSTT
T ss_pred HHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCC--CceEEecCCCHHHHHHHHHcCCCEEEeCCCcCcCCCCC
Confidence 4577888999999987543321 1 122344444444321 55555532 234566889998866321 1
Q ss_pred C--CH------HHHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccC
Q 010240 389 M--PA------RTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYP 432 (514)
Q Consensus 389 ~--~~------~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~ 432 (514)
. .. ..+++......+..-...|++++.++.+.|+|.+.+|..+-
T Consensus 157 ~~~~~~~~~~~~~~~~~~~ipvia~GGI~~~~~~~~~~~~Gad~v~vG~al~ 208 (223)
T 1y0e_A 157 QLLYQNDFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAIT 208 (223)
T ss_dssp CCTTHHHHHHHHHHHHHCCSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred CCCCcccHHHHHHHHhhCCCCEEEecCCCCHHHHHHHHHcCCCEEEEChHHc
Confidence 1 11 12222222222333345699999999999999999986543
No 420
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=80.46 E-value=18 Score=33.47 Aligned_cols=104 Identities=15% Similarity=0.145 Sum_probs=67.8
Q ss_pred HHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEE--cC--cHHHHHhC-CCCeEEeCCCC-------CCH
Q 010240 324 VKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLI--ND--RIDIALAC-DADGVHLGQSD-------MPA 391 (514)
Q Consensus 324 ~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v--~~--~~~~a~~~-ga~gvhl~~~~-------~~~ 391 (514)
+..+...|+++|.|-...++..++. .+.+.++..|..+++ ++ ..+.|.++ |++.+=+...+ +..
T Consensus 116 i~ea~~~GAD~ilLi~a~l~~~~l~----~l~~~a~~lGl~~lvEv~~~eE~~~A~~l~g~~iIGinnr~l~t~~~d~~~ 191 (251)
T 1i4n_A 116 VKLASSVGADAILIIARILTAEQIK----EIYEAAEELGMDSLVEVHSREDLEKVFSVIRPKIIGINTRDLDTFEIKKNV 191 (251)
T ss_dssp HHHHHHTTCSEEEEEGGGSCHHHHH----HHHHHHHTTTCEEEEEECSHHHHHHHHTTCCCSEEEEECBCTTTCCBCTTH
T ss_pred HHHHHHcCCCEEEEecccCCHHHHH----HHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCCEEEEeCcccccCCCCHHH
Confidence 4458899999999988777765444 344566677887766 44 24567788 99944333322 121
Q ss_pred -HHHHhhcCCCc-EE-EEecCCHHHHHHhhhCCCcEEEeccccC
Q 010240 392 -RTARALLGPDK-II-GVSCKTPEEAHQAWIDGANYIGCGGVYP 432 (514)
Q Consensus 392 -~~~~~~~~~~~-~i-g~s~~~~~e~~~a~~~g~d~v~~~~vf~ 432 (514)
..+.+..+.+. .+ ....+|++++.++.+. +|-+++|.-+-
T Consensus 192 ~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVG~aim 234 (251)
T 1i4n_A 192 LWELLPLVPDDTVVVAESGIKDPRELKDLRGK-VNAVLVGTSIM 234 (251)
T ss_dssp HHHHGGGSCTTSEEEEESCCCCGGGHHHHTTT-CSEEEECHHHH
T ss_pred HHHHHHhCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEcHHHc
Confidence 23334444433 33 3345799999999999 99999987653
No 421
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=80.43 E-value=4.6 Score=38.08 Aligned_cols=109 Identities=20% Similarity=0.138 Sum_probs=62.0
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCH----HHHHHHHHHHHHHHhhc-CceEEEcC---------------c---HHHH
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADT----RGFLEAAKACLQICCVH-GVPLLIND---------------R---IDIA 374 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~----~~~~~~~~~~~~~~~~~-~~~l~v~~---------------~---~~~a 374 (514)
++..+.++.+...|+++|++|...... +++.+.+..++. .. +.++++.- + ++.+
T Consensus 52 ~e~~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~---~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~ll~~~ 128 (276)
T 3o1n_A 52 TDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIRE---IITDKPLLFTFRSAKEGGEQALTTGQYIDLNRAA 128 (276)
T ss_dssp HHHHHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHH---HCCSSCEEEECCBGGGTCSBCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHH---hcCCCCEEEEEEEhhhCCCCCCCHHHHHHHHHHH
Confidence 345666666766899999999986553 333444443433 33 56776510 1 3345
Q ss_pred HhCC-CCeEEeCCCCCC--HHHH-HhhcCCCcEEEEecC----CH--HH----HHHhhhCCCcEEEeccccC
Q 010240 375 LACD-ADGVHLGQSDMP--ARTA-RALLGPDKIIGVSCK----TP--EE----AHQAWIDGANYIGCGGVYP 432 (514)
Q Consensus 375 ~~~g-a~gvhl~~~~~~--~~~~-~~~~~~~~~ig~s~~----~~--~e----~~~a~~~g~d~v~~~~vf~ 432 (514)
.+.| ++.|=+.-.... ...+ ......+..+..|.| |+ +| ..++.+.|||++ ++--
T Consensus 129 l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~GaDIv---Kia~ 197 (276)
T 3o1n_A 129 VDSGLVDMIDLELFTGDDEVKATVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIP---KIAV 197 (276)
T ss_dssp HHHTCCSEEEEEGGGCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEE---EEEE
T ss_pred HhcCCCCEEEEECcCCHHHHHHHHHHHHhCCCEEEEEeecCCCCcCHHHHHHHHHHHHHcCCCEE---EEEe
Confidence 6677 888877543221 1111 111224556667788 32 34 446778999999 5544
No 422
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=80.35 E-value=9.7 Score=37.41 Aligned_cols=58 Identities=28% Similarity=0.332 Sum_probs=39.2
Q ss_pred HHHhCCCCeEEeCCCC------CC---HHHHHhhcCCCcEEEEecCCHHHHHHhhhCC-CcEEEecccc
Q 010240 373 IALACDADGVHLGQSD------MP---ARTARALLGPDKIIGVSCKTPEEAHQAWIDG-ANYIGCGGVY 431 (514)
Q Consensus 373 ~a~~~ga~gvhl~~~~------~~---~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g-~d~v~~~~vf 431 (514)
.+.+.|++++|+.... .+ ...+++.... .+++..--|++++.++.+.| +|.|.+|--+
T Consensus 258 ~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~i-Pvi~~Ggi~~~~a~~~l~~g~aD~V~igR~~ 325 (365)
T 2gou_A 258 LLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAYQG-VLIYAGRYNAEKAEQAINDGLADMIGFGRPF 325 (365)
T ss_dssp HHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCS-EEEEESSCCHHHHHHHHHTTSCSEEECCHHH
T ss_pred HHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHCCC-cEEEeCCCCHHHHHHHHHCCCcceehhcHHH
Confidence 4557899999987642 12 2345555433 34444444899999999998 9999998544
No 423
>3g3d_A UMP synthase, uridine 5'-monophosphate synthase; C-terminal domain, orotidine 5'-monophosphate decarboxylase, human, 5-fluoro-6-azido-UMP; HET: 5FU; 1.70A {Homo sapiens} PDB: 3bvj_A* 3mw7_A* 4hib_A* 4hkp_A* 2p1f_A 2eaw_A 3bgg_A* 3bgj_A*
Probab=80.35 E-value=2.5 Score=40.48 Aligned_cols=42 Identities=14% Similarity=0.156 Sum_probs=34.5
Q ss_pred cHHHHH-HCCCCCCceEEEeecccCCCCHHHHHHHHHHH-HHHHhhh
Q 010240 468 NASDVM-KIGVSNLKGVAVVSALFDRECILPESKKLHAV-LMDAVQR 512 (514)
Q Consensus 468 ~~~~~~-~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~-~~~~~~~ 512 (514)
+-.+++ ++|++ .+.+|+.|++++||.++++++++. |+.+.+|
T Consensus 266 TP~~Ai~~~GaD---~iVVGRpIt~A~dP~~aa~~i~~~~w~ay~~~ 309 (312)
T 3g3d_A 266 SPQEVIGKRGSD---IIIVGRGIISAADRLEAAEMYRKAAWEAYLSR 309 (312)
T ss_dssp CHHHHHHTTCCS---EEEESHHHHTSSSHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHhCCCC---EEEEChhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 356778 89999 999999999999999999998755 4544444
No 424
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=80.33 E-value=7.7 Score=36.88 Aligned_cols=117 Identities=11% Similarity=0.082 Sum_probs=72.8
Q ss_pred CCHHHHHHHHHhCCCCEEEEEc-----CCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHH
Q 010240 318 RSITDAVKAALEGGATIIQLRE-----KDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPAR 392 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~ 392 (514)
+.+.+.++.+++.|++.+.+-- ..++.+|..++++...+.+.. +
T Consensus 24 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r------------------------------ 72 (294)
T 3b4u_A 24 DAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIA-P------------------------------ 72 (294)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCC-G------------------------------
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-C------------------------------
Confidence 4577888889999999988732 456666666555544332210 1
Q ss_pred HHHhhcCCCcEEEEecCC----HHHHHHhhhCCCcEEEeccccCCCCCCCCccCCH-HHHHHHHHcC---CCCEEEE---
Q 010240 393 TARALLGPDKIIGVSCKT----PEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGL-DGLKTVCLAS---KLPVVAI--- 461 (514)
Q Consensus 393 ~~~~~~~~~~~ig~s~~~----~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~-~~l~~~~~~~---~~pv~a~--- 461 (514)
...++|+++.+ .+.++.|.+.|+|.+.+.|-+... ++ +.-++ ++++.+.+.. ++||+.-
T Consensus 73 -------~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~-~~--s~~~l~~~f~~va~a~p~~~lPiilYn~P 142 (294)
T 3b4u_A 73 -------SRIVTGVLVDSIEDAADQSAEALNAGARNILLAPPSYFK-NV--SDDGLFAWFSAVFSKIGKDARDILVYNIP 142 (294)
T ss_dssp -------GGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCCCSSC-SC--CHHHHHHHHHHHHHHHCTTCCCEEEEECH
T ss_pred -------CcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCCcCCC-CC--CHHHHHHHHHHHHHhcCCCCCcEEEEECc
Confidence 13455666654 334667888999998886544321 02 11233 6788888887 8998875
Q ss_pred --CC--CCcccHHHHH-HC
Q 010240 462 --GG--IGISNASDVM-KI 475 (514)
Q Consensus 462 --GG--i~~~~~~~~~-~~ 475 (514)
-| ++++.+.++. +.
T Consensus 143 ~~tg~~l~~~~~~~La~~~ 161 (294)
T 3b4u_A 143 SVTMVTLSVELVGRLKAAF 161 (294)
T ss_dssp HHHSCCCCHHHHHHHHHHC
T ss_pred chhCcCCCHHHHHHHHHhC
Confidence 24 4577777776 44
No 425
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=80.27 E-value=2.7 Score=39.07 Aligned_cols=130 Identities=15% Similarity=0.125 Sum_probs=77.6
Q ss_pred cHHHHHhCCCCeEEeCCCCC------CH----HHHHhhcCCCcEEEEecC-CHHH-------------HHHhh-hCCCc-
Q 010240 370 RIDIALACDADGVHLGQSDM------PA----RTARALLGPDKIIGVSCK-TPEE-------------AHQAW-IDGAN- 423 (514)
Q Consensus 370 ~~~~a~~~ga~gvhl~~~~~------~~----~~~~~~~~~~~~ig~s~~-~~~e-------------~~~a~-~~g~d- 423 (514)
.+....++|+++|-++.+.. .. .+++..+..++.+.+-+. +.+| +..+. ..+.+
T Consensus 79 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~ 158 (255)
T 1tre_A 79 SAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAA 158 (255)
T ss_dssp CHHHHHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHCGGG
T ss_pred CHHHHHHcCCCEEEECccccccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHH
Confidence 35566677777776665321 11 123444556777766665 4444 11111 23445
Q ss_pred ----EEEeccccCCCCCCCCccCCH----HHHHHHHHc------CCCCEEEECCCCcccHHHHHH-CCCCCCceEEEeec
Q 010240 424 ----YIGCGGVYPTNTKANNLTVGL----DGLKTVCLA------SKLPVVAIGGIGISNASDVMK-IGVSNLKGVAVVSA 488 (514)
Q Consensus 424 ----~v~~~~vf~t~~k~~~~~~g~----~~l~~~~~~------~~~pv~a~GGi~~~~~~~~~~-~Ga~~~~gva~~~~ 488 (514)
+|.+=|+..-.|...+++-.. ..++.+... -.++|+==|+++++|+.++++ .++| |+-+|++
T Consensus 159 ~~~vvIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diD---G~LVGgA 235 (255)
T 1tre_A 159 FEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVNASNAAELFAQPDID---GALVGGA 235 (255)
T ss_dssp GTTCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECSCCCTTTHHHHHTSTTCC---EEEESGG
T ss_pred cCcEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCCCHHHHHHHHcCCCCC---eeEecHH
Confidence 777778887554332321111 223332110 148999999999999999998 6566 9999999
Q ss_pred ccCCCCHHHHHHHH
Q 010240 489 LFDRECILPESKKL 502 (514)
Q Consensus 489 i~~~~~~~~~~~~~ 502 (514)
-++++++.+.++..
T Consensus 236 sL~a~~F~~Ii~~~ 249 (255)
T 1tre_A 236 SLKADAFAVIVKAA 249 (255)
T ss_dssp GGCHHHHHHHHHHH
T ss_pred HhChHHHHHHHHHH
Confidence 99877776666543
No 426
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=80.12 E-value=9.4 Score=36.65 Aligned_cols=156 Identities=17% Similarity=0.114 Sum_probs=77.2
Q ss_pred ceEEEEeCCCCCc--cC--CCCHHHHHHHHHhCCCCEEEEEc----CC--CC-HHHHHHHHHHHHHHHhhc-CceEEEcC
Q 010240 302 LFLYAVTDSGMNK--KW--GRSITDAVKAALEGGATIIQLRE----KD--AD-TRGFLEAAKACLQICCVH-GVPLLIND 369 (514)
Q Consensus 302 ~~ly~it~~~~~~--~~--~~~~~~~~~~~~~~Gv~~v~lr~----~~--~~-~~~~~~~~~~~~~~~~~~-~~~l~v~~ 369 (514)
|.+.-+||.++.. .+ .+...+.+++.++.|+++|=+=- +. .+ .+|+.+....+..+.+.+ ++++.|..
T Consensus 45 MGIlNvTPDSFsdgg~~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISIDT 124 (318)
T 2vp8_A 45 MAIVNRTPDSFYDKGATFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISVDT 124 (318)
T ss_dssp EEEEC--------------CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEEEEC
T ss_pred EEEEeCCCCcccCCCccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEEeC
Confidence 5666677765533 00 24567788889999999998842 11 22 444444444455555555 88898855
Q ss_pred c----HHHHHhCCCCeEEeCC--CCCCHHHHHhhcCCCcEEEEecCC-HH-------------------------HHHHh
Q 010240 370 R----IDIALACDADGVHLGQ--SDMPARTARALLGPDKIIGVSCKT-PE-------------------------EAHQA 417 (514)
Q Consensus 370 ~----~~~a~~~ga~gvhl~~--~~~~~~~~~~~~~~~~~ig~s~~~-~~-------------------------e~~~a 417 (514)
+ .+.|+++|++-|---+ .+......-..++...++...-.. +. .+..|
T Consensus 125 ~~~~VaeaAl~aGa~iINDVsg~~d~~m~~vaa~~g~~vVlmh~~G~~p~tmq~~~~y~~~~~dv~~ev~~~l~~~i~~a 204 (318)
T 2vp8_A 125 WRAQVAKAACAAGADLINDTWGGVDPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERA 204 (318)
T ss_dssp SCHHHHHHHHHHTCCEEEETTSSSSTTHHHHHHHHTCEEEEECC-------------CCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCEEEECCCCCchHHHHHHHHhCCCEEEECCCCCCccccccccccccccccHHHHHHHHHHHHHHHH
Confidence 2 3456678988764322 233333333333444444322101 11 15567
Q ss_pred hhCCCc--EEEeccccCCCCCCCCccCCHHHHHHHHH--cCCCCEEE
Q 010240 418 WIDGAN--YIGCGGVYPTNTKANNLTVGLDGLKTVCL--ASKLPVVA 460 (514)
Q Consensus 418 ~~~g~d--~v~~~~vf~t~~k~~~~~~g~~~l~~~~~--~~~~pv~a 460 (514)
.+.|.+ -|++=|-|-. .|.. .-.++.++.+.. .++.|++.
T Consensus 205 ~~aGI~~~~IilDPG~GF-~Kt~--~~nl~ll~~l~~l~~lg~PvL~ 248 (318)
T 2vp8_A 205 VAAGVAREKVLIDPAHDF-GKNT--FHGLLLLRHVADLVMTGWPVLM 248 (318)
T ss_dssp HHTTCCGGGEEEETTTTC-CTTS--HHHHHHHHTHHHHHTTSSCBEE
T ss_pred HHcCCChhhEEEcCCCCc-ccCH--HHHHHHHHHHHHHHhCCCCEEE
Confidence 788986 4666555432 2211 113444444432 24788765
No 427
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=79.79 E-value=28 Score=32.92 Aligned_cols=105 Identities=12% Similarity=0.115 Sum_probs=69.0
Q ss_pred HHHHHHHhCCCCEEEEEcCCC----------CHHHHHHHHHHHHHHHhhcCceEEEc-------------C------cHH
Q 010240 322 DAVKAALEGGATIIQLREKDA----------DTRGFLEAAKACLQICCVHGVPLLIN-------------D------RID 372 (514)
Q Consensus 322 ~~~~~~~~~Gv~~v~lr~~~~----------~~~~~~~~~~~~~~~~~~~~~~l~v~-------------~------~~~ 372 (514)
+-++++++.|++.|.+-.+.. +.++..+.+....+.++++|..+.++ + -.+
T Consensus 84 ~~i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~ 163 (298)
T 2cw6_A 84 KGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTK 163 (298)
T ss_dssp HHHHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHH
T ss_pred HhHHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHH
Confidence 357889999999999865533 33445566666777788888877421 1 133
Q ss_pred HHHhCCCCeEEeCCCC--CCHH-------HHHhhcCCCcEEEEecCC-----HHHHHHhhhCCCcEEEe
Q 010240 373 IALACDADGVHLGQSD--MPAR-------TARALLGPDKIIGVSCKT-----PEEAHQAWIDGANYIGC 427 (514)
Q Consensus 373 ~a~~~ga~gvhl~~~~--~~~~-------~~~~~~~~~~~ig~s~~~-----~~e~~~a~~~g~d~v~~ 427 (514)
.+.++|++.+.+.... ..+. .+++.. ++..++.-+|+ ..-...|.+.|++++=.
T Consensus 164 ~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~-~~~~i~~H~Hn~~Gla~An~laA~~aGa~~vd~ 231 (298)
T 2cw6_A 164 KFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEV-PLAALAVHCHDTYGQALANTLMALQMGVSVVDS 231 (298)
T ss_dssp HHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHS-CGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEE
T ss_pred HHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhC-CCCeEEEEECCCCchHHHHHHHHHHhCCCEEEe
Confidence 4567899999886432 2222 233333 35678888886 55678889999999843
No 428
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=79.62 E-value=2.6 Score=39.01 Aligned_cols=128 Identities=16% Similarity=0.146 Sum_probs=73.7
Q ss_pred cHHHHHhCCCCeEEeCCCCC------CH----HHHHhhcCCCcEEEEecC-CHHH-------------HHHhh-hCCCc-
Q 010240 370 RIDIALACDADGVHLGQSDM------PA----RTARALLGPDKIIGVSCK-TPEE-------------AHQAW-IDGAN- 423 (514)
Q Consensus 370 ~~~~a~~~ga~gvhl~~~~~------~~----~~~~~~~~~~~~ig~s~~-~~~e-------------~~~a~-~~g~d- 423 (514)
.+....++|+.+|-++.+.. .. .+++..+..++.+.+-+. +.+| +..+. ..+.+
T Consensus 78 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~ 157 (252)
T 2btm_A 78 SPVMLKDLGVTYVILGHSERRQMFAETDETVNKKVLAAFTRGLIPIICCGESLEEREAGQTNAVVASQVEKALAGLTPEQ 157 (252)
T ss_dssp CHHHHHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCHHH
T ss_pred CHHHHHHcCCCEEEeCchhcccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHHHHhcCCHHH
Confidence 35555666666665554321 11 123334445666666565 4442 22222 12334
Q ss_pred ----EEEeccccCCCCCCCCccCCH----HHHHHHHHc-------CCCCEEEECCCCcccHHHHHH-CCCCCCceEEEee
Q 010240 424 ----YIGCGGVYPTNTKANNLTVGL----DGLKTVCLA-------SKLPVVAIGGIGISNASDVMK-IGVSNLKGVAVVS 487 (514)
Q Consensus 424 ----~v~~~~vf~t~~k~~~~~~g~----~~l~~~~~~-------~~~pv~a~GGi~~~~~~~~~~-~Ga~~~~gva~~~ 487 (514)
+|.+=|+..-.|...+++-.. ..++.+... -.++|+==|+++++|+.++++ .++| |+-+|+
T Consensus 158 ~~~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diD---G~LVGg 234 (252)
T 2btm_A 158 VKQAVIAYEPIWAIGTGKSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSVKPDNIRDFLAQQQID---GALVGG 234 (252)
T ss_dssp HTTCEEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTSEEEEESSCCTTTHHHHHTSTTCC---EEEESG
T ss_pred cCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCCCHHHHHHHHcCCCCC---eeEecH
Confidence 787888887555333322111 223333211 258999999999999999994 6555 999999
Q ss_pred cccCCCCHHHHHH
Q 010240 488 ALFDRECILPESK 500 (514)
Q Consensus 488 ~i~~~~~~~~~~~ 500 (514)
+-++++++.+.++
T Consensus 235 AsL~a~~F~~Ii~ 247 (252)
T 2btm_A 235 ASLEPASFLQLVE 247 (252)
T ss_dssp GGSSHHHHHHHHH
T ss_pred HHhChHHHHHHHH
Confidence 9997665555443
No 429
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=79.60 E-value=11 Score=34.82 Aligned_cols=127 Identities=15% Similarity=0.086 Sum_probs=75.9
Q ss_pred cHHHHHhCCCCeEEeCCCCC------CHH----HHHhhcCCCcEEEEecC-CHHHH-------------HHhh-hCC---
Q 010240 370 RIDIALACDADGVHLGQSDM------PAR----TARALLGPDKIIGVSCK-TPEEA-------------HQAW-IDG--- 421 (514)
Q Consensus 370 ~~~~a~~~ga~gvhl~~~~~------~~~----~~~~~~~~~~~ig~s~~-~~~e~-------------~~a~-~~g--- 421 (514)
.+....++|+++|-++.+.. ... +++..+..++.+.+-+. +.+|- ..+. ..+
T Consensus 79 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~ 158 (250)
T 2j27_A 79 SLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGETLQERESGRTAVVVLTQIAAIAKKLKKAD 158 (250)
T ss_dssp BHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHTCCGGG
T ss_pred CHHHHHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEeCCCHHHhhcccHHHHHHHHHHHHHhcCCHHH
Confidence 45667777888887765321 111 33344455666666665 44432 1122 122
Q ss_pred --CcEEEeccccCCCCCCCCccCCH----HHHHHHHHc-C------CCCEEEECCCCcccHHHHH-HCCCCCCceEEEee
Q 010240 422 --ANYIGCGGVYPTNTKANNLTVGL----DGLKTVCLA-S------KLPVVAIGGIGISNASDVM-KIGVSNLKGVAVVS 487 (514)
Q Consensus 422 --~d~v~~~~vf~t~~k~~~~~~g~----~~l~~~~~~-~------~~pv~a~GGi~~~~~~~~~-~~Ga~~~~gva~~~ 487 (514)
-.+|.+=|+..-.|...+++-.. ..++.+... + .++|+==|+++++|+.+++ ..++| |+-+|+
T Consensus 159 ~~~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diD---G~LVGg 235 (250)
T 2j27_A 159 WAKVVIAYEAVWAIGTGKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVN---GFLVGG 235 (250)
T ss_dssp GGGEEEEEECGGGTTSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEEESSCCTTTHHHHHTSTTCC---EEEESG
T ss_pred hCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCHHHHHHHHcCCCCC---eeeeeh
Confidence 24676778887555333322111 223333111 1 4899999999999999999 46556 999999
Q ss_pred cccCCCCHHHHHH
Q 010240 488 ALFDRECILPESK 500 (514)
Q Consensus 488 ~i~~~~~~~~~~~ 500 (514)
+-++ +++.+.++
T Consensus 236 AsL~-~~F~~ii~ 247 (250)
T 2j27_A 236 ASLK-PEFVDIIK 247 (250)
T ss_dssp GGGS-TTHHHHHH
T ss_pred HHHH-HHHHHHHH
Confidence 9999 88877664
No 430
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=79.55 E-value=13 Score=29.33 Aligned_cols=85 Identities=15% Similarity=0.147 Sum_probs=59.5
Q ss_pred ecCCHHHHHHhh-hCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHc---CCCCEEEECCCC-cccHHHHHHCCCCCCc
Q 010240 407 SCKTPEEAHQAW-IDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLA---SKLPVVAIGGIG-ISNASDVMKIGVSNLK 481 (514)
Q Consensus 407 s~~~~~e~~~a~-~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~---~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~ 481 (514)
.+.+.+|+.... +...|.+++---.|. .-|++.++++++. .++||+.+.+-. .+....++++|++
T Consensus 31 ~~~~~~~al~~l~~~~~dlvllD~~~p~-------~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~--- 100 (122)
T 3gl9_A 31 EAENGQIALEKLSEFTPDLIVLXIMMPV-------MDGFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGAR--- 100 (122)
T ss_dssp EESSHHHHHHHHTTBCCSEEEECSCCSS-------SCHHHHHHHHHTSTTTTTSCEEEEESCCSHHHHHHHHHTTCS---
T ss_pred EeCCHHHHHHHHHhcCCCEEEEeccCCC-------CcHHHHHHHHHhcccccCCCEEEEecCCchHHHHHHHhcChh---
Confidence 567888776655 456899988654442 1378899998764 268988887754 6677889999999
Q ss_pred eEEEeecccCCCCHHHHHHHHHHHH
Q 010240 482 GVAVVSALFDRECILPESKKLHAVL 506 (514)
Q Consensus 482 gva~~~~i~~~~~~~~~~~~~~~~~ 506 (514)
++ +.+.-++.+....+++.+
T Consensus 101 ~~-----l~KP~~~~~L~~~i~~~l 120 (122)
T 3gl9_A 101 KV-----MRKPFSPSQFIEEVKHLL 120 (122)
T ss_dssp EE-----EESSCCHHHHHHHHHHHH
T ss_pred hh-----ccCCCCHHHHHHHHHHHh
Confidence 65 445667766666666554
No 431
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=79.55 E-value=4.9 Score=37.29 Aligned_cols=39 Identities=10% Similarity=0.107 Sum_probs=31.0
Q ss_pred HHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccC
Q 010240 393 TARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYP 432 (514)
Q Consensus 393 ~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~ 432 (514)
.+|+.......+|...+|++++.++.+ +||-+++|..+-
T Consensus 193 ~vr~~~~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGSAiV 231 (252)
T 3tha_A 193 EIRSFTNLPIFVGFGIQNNQDVKRMRK-VADGVIVGTSIV 231 (252)
T ss_dssp HHHTTCCSCEEEESSCCSHHHHHHHTT-TSSEEEECHHHH
T ss_pred HHHHhcCCcEEEEcCcCCHHHHHHHHh-cCCEEEECHHHH
Confidence 344455567899999999999998876 599999997664
No 432
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=79.53 E-value=2.9 Score=40.86 Aligned_cols=68 Identities=15% Similarity=0.170 Sum_probs=48.4
Q ss_pred HHHHHHHHHcC-CCCEEEECCCCc--ccHHHHHHCCCC--CCc-eEEEeecccCCCCHHHHHHHHHHHHHHHhhh
Q 010240 444 LDGLKTVCLAS-KLPVVAIGGIGI--SNASDVMKIGVS--NLK-GVAVVSALFDRECILPESKKLHAVLMDAVQR 512 (514)
Q Consensus 444 ~~~l~~~~~~~-~~pv~a~GGi~~--~~~~~~~~~Ga~--~~~-gva~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 512 (514)
.+.++.+++.+ +.++ .+-||.+ .+..++++.|++ +.. .+.+||.|+.+.||.++++++++.+.+..++
T Consensus 277 ~~el~~IR~~~~~~~i-LtPGIgaqGGD~~~a~~~Gad~~~~~~iIvVGR~I~~A~dp~~AA~~i~~ei~~a~~~ 350 (353)
T 2ffc_A 277 YDEIKKIRELFPDCYI-LAPGVGAQKGDLRKMLCNGYSKNYEKVLINVGRAITKSGSPQQAAREYHQQIKEVLAE 350 (353)
T ss_dssp HHHHHHHHHHCTTCCE-EECCBSTTCBCHHHHHHHHCCSSGGGEEEEECHHHHTSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeE-EeCcccCCCCCHHHHHHcCCCcccCcEEEEECHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 34455555544 4443 3677753 568888888887 011 3788999999999999999999999876554
No 433
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=79.33 E-value=7.3 Score=30.64 Aligned_cols=85 Identities=13% Similarity=0.084 Sum_probs=58.6
Q ss_pred ecCCHHHHHHhh-hCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEE
Q 010240 407 SCKTPEEAHQAW-IDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVA 484 (514)
Q Consensus 407 s~~~~~e~~~a~-~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva 484 (514)
.+.+.+|+.... +...|.+++---.|. . -|++.++++++..++|++.+.+-. .+....+++.|++ ++
T Consensus 31 ~~~~~~~al~~~~~~~~dlii~D~~~p~-----~--~g~~~~~~lr~~~~~~ii~~t~~~~~~~~~~~~~~ga~---~~- 99 (120)
T 3f6p_A 31 CAHDGNEAVEMVEELQPDLILLDIMLPN-----K--DGVEVCREVRKKYDMPIIMLTAKDSEIDKVIGLEIGAD---DY- 99 (120)
T ss_dssp EESSHHHHHHHHHTTCCSEEEEETTSTT-----T--HHHHHHHHHHTTCCSCEEEEEESSCHHHHHHHHHTTCC---EE-
T ss_pred EeCCHHHHHHHHhhCCCCEEEEeCCCCC-----C--CHHHHHHHHHhcCCCCEEEEECCCChHHHHHHHhCCcc---ee-
Confidence 467888776554 556899988654442 1 378888998877789988876654 5567788999999 65
Q ss_pred EeecccCCCCHHHHHHHHHHHH
Q 010240 485 VVSALFDRECILPESKKLHAVL 506 (514)
Q Consensus 485 ~~~~i~~~~~~~~~~~~~~~~~ 506 (514)
+.+.-++.+....+++.+
T Consensus 100 ----l~KP~~~~~l~~~i~~~l 117 (120)
T 3f6p_A 100 ----VTKPFSTRELLARVKANL 117 (120)
T ss_dssp ----EEESCCHHHHHHHHHHHH
T ss_pred ----EcCCCCHHHHHHHHHHHH
Confidence 345556666666665544
No 434
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=79.32 E-value=2.4 Score=39.17 Aligned_cols=68 Identities=18% Similarity=0.026 Sum_probs=48.5
Q ss_pred HHHHhhhCCCcEEEeccccCCCCCCCCc------------------cCCHHHHHHHHHcCCCCEEEECCCCc-------c
Q 010240 413 EAHQAWIDGANYIGCGGVYPTNTKANNL------------------TVGLDGLKTVCLASKLPVVAIGGIGI-------S 467 (514)
Q Consensus 413 e~~~a~~~g~d~v~~~~vf~t~~k~~~~------------------~~g~~~l~~~~~~~~~pv~a~GGi~~-------~ 467 (514)
+++...+. +|++=++-.|. .|... ..+++.++++++.+++||...+++++ +
T Consensus 24 ~a~~~~~~-ad~iel~~p~s---dp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~~~ 99 (248)
T 1geq_A 24 FLLALDEY-AGAIELGIPFS---DPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPIVLMTYYNPIYRAGVRN 99 (248)
T ss_dssp HHHHHGGG-BSCEEEECCCS---CCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCCEEEEECHHHHHHHCHHH
T ss_pred HHHHHHHc-CCEEEECCCCC---CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCCCEEEEeccchhhhcCHHH
Confidence 35555566 99997764332 22221 12367788888878899998888886 6
Q ss_pred cHHHHHHCCCCCCceEEEee
Q 010240 468 NASDVMKIGVSNLKGVAVVS 487 (514)
Q Consensus 468 ~~~~~~~~Ga~~~~gva~~~ 487 (514)
.+..++++|++ +|.++.
T Consensus 100 ~~~~~~~~Gad---~v~~~~ 116 (248)
T 1geq_A 100 FLAEAKASGVD---GILVVD 116 (248)
T ss_dssp HHHHHHHHTCC---EEEETT
T ss_pred HHHHHHHCCCC---EEEECC
Confidence 78899999999 999874
No 435
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=79.30 E-value=19 Score=28.48 Aligned_cols=88 Identities=13% Similarity=0.007 Sum_probs=59.9
Q ss_pred ecCCHHHHHHhh-hCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHc---CCCCEEEECCCCcccHHHHHHCCCCCCce
Q 010240 407 SCKTPEEAHQAW-IDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLA---SKLPVVAIGGIGISNASDVMKIGVSNLKG 482 (514)
Q Consensus 407 s~~~~~e~~~a~-~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~---~~~pv~a~GGi~~~~~~~~~~~Ga~~~~g 482 (514)
.+.+.+++.... +...|.|++..-.+. .-|++.++++++. .++||+.+.+-.......+++.|++ +
T Consensus 32 ~~~~~~~a~~~l~~~~~dlvi~d~~l~~-------~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~g~~---~ 101 (133)
T 3nhm_A 32 TAADGASGLQQALAHPPDVLISDVNMDG-------MDGYALCGHFRSEPTLKHIPVIFVSGYAPRTEGPADQPVPD---A 101 (133)
T ss_dssp EESSHHHHHHHHHHSCCSEEEECSSCSS-------SCHHHHHHHHHHSTTTTTCCEEEEESCCC-----TTSCCCS---E
T ss_pred EECCHHHHHHHHhcCCCCEEEEeCCCCC-------CCHHHHHHHHHhCCccCCCCEEEEeCCCcHhHHHHhhcCCc---e
Confidence 466777766544 566999988765542 2378999999875 2789999988765545778888888 5
Q ss_pred EEEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 483 VAVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 483 va~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
+ +...-++.+....+.+.++..
T Consensus 102 ~-----l~KP~~~~~l~~~i~~~l~~~ 123 (133)
T 3nhm_A 102 Y-----LVKPVKPPVLIAQLHALLARA 123 (133)
T ss_dssp E-----EESSCCHHHHHHHHHHHHHHH
T ss_pred E-----EeccCCHHHHHHHHHHHHhhh
Confidence 4 446667777777787777664
No 436
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=79.27 E-value=7.4 Score=36.29 Aligned_cols=39 Identities=18% Similarity=0.158 Sum_probs=31.0
Q ss_pred HHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccC
Q 010240 393 TARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYP 432 (514)
Q Consensus 393 ~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~ 432 (514)
.+|+.......+|..++|++.+.+ ...|||.+.+|..+.
T Consensus 200 ~vr~~~~~pv~vG~GI~t~e~~~~-~~~gADgvIVGSai~ 238 (262)
T 2ekc_A 200 EYRELCDKPVVVGFGVSKKEHARE-IGSFADGVVVGSALV 238 (262)
T ss_dssp HHHHHCCSCEEEESSCCSHHHHHH-HHTTSSEEEECHHHH
T ss_pred HHHhhcCCCEEEeCCCCCHHHHHH-HHcCCCEEEECHHHH
Confidence 344444567888999999999999 678899999987664
No 437
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=79.25 E-value=8.9 Score=36.91 Aligned_cols=41 Identities=7% Similarity=-0.146 Sum_probs=29.3
Q ss_pred CCHHHHHHHHHhCCCCEEEEEc-----CCCCHHHHHHHHHHHHHHH
Q 010240 318 RSITDAVKAALEGGATIIQLRE-----KDADTRGFLEAAKACLQIC 358 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~-----~~~~~~~~~~~~~~~~~~~ 358 (514)
+.+.+.++.+++.|++.+.+-- ..++.+|..++++...+.+
T Consensus 32 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~ 77 (318)
T 3qfe_A 32 ASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAV 77 (318)
T ss_dssp HHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHh
Confidence 4577888889999999988733 3567777777666655544
No 438
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=79.23 E-value=8.8 Score=31.12 Aligned_cols=89 Identities=13% Similarity=-0.038 Sum_probs=62.0
Q ss_pred ecCCHHHHHHhhh--CCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceE
Q 010240 407 SCKTPEEAHQAWI--DGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGV 483 (514)
Q Consensus 407 s~~~~~e~~~a~~--~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gv 483 (514)
.+.+.+++..... ...|.|++.--.|. ..-|++.++++++..++||+.+.+-. .+.+..++++|++ ++
T Consensus 34 ~~~~~~~a~~~l~~~~~~dlvi~D~~l~~------~~~g~~~~~~l~~~~~~~ii~ls~~~~~~~~~~~~~~g~~---~~ 104 (140)
T 3h5i_A 34 IALTGEAAVEKVSGGWYPDLILMDIELGE------GMDGVQTALAIQQISELPVVFLTAHTEPAVVEKIRSVTAY---GY 104 (140)
T ss_dssp EESSHHHHHHHHHTTCCCSEEEEESSCSS------SCCHHHHHHHHHHHCCCCEEEEESSSSCCCCGGGGGSCEE---EE
T ss_pred EecChHHHHHHHhcCCCCCEEEEeccCCC------CCCHHHHHHHHHhCCCCCEEEEECCCCHHHHHHHHhCCCc---EE
Confidence 4778888777664 46899988754431 12378888888876689988887765 5667788889888 54
Q ss_pred EEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 484 AVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 484 a~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
+...-++.+....+...++..
T Consensus 105 -----l~KP~~~~~l~~~i~~~l~~~ 125 (140)
T 3h5i_A 105 -----VMKSATEQVLITIVEMALRLY 125 (140)
T ss_dssp -----EETTCCHHHHHHHHHHHHHHH
T ss_pred -----EeCCCCHHHHHHHHHHHHHHH
Confidence 445556766666666666553
No 439
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=79.23 E-value=13 Score=30.56 Aligned_cols=89 Identities=20% Similarity=0.204 Sum_probs=62.2
Q ss_pred EEecCCHHHHHHhh-hCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEEECCCC-cccHHHHHHCCCCCCc
Q 010240 405 GVSCKTPEEAHQAW-IDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVAIGGIG-ISNASDVMKIGVSNLK 481 (514)
Q Consensus 405 g~s~~~~~e~~~a~-~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a~GGi~-~~~~~~~~~~Ga~~~~ 481 (514)
-..+.+.+++.... +...|.|++.--.+. .-|++.++.+++.. ++||+.+.+-. .+....+++.|++
T Consensus 49 v~~~~~~~~al~~l~~~~~dlii~D~~l~~-------~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~--- 118 (150)
T 4e7p_A 49 VLQAKNGQEAIQLLEKESVDIAILDVEMPV-------KTGLEVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVD--- 118 (150)
T ss_dssp EEEESSHHHHHHHHTTSCCSEEEECSSCSS-------SCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCS---
T ss_pred EEEECCHHHHHHHhhccCCCEEEEeCCCCC-------CcHHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHCCCc---
Confidence 34577888877654 556899988754442 23788999998765 78988887654 6678889999999
Q ss_pred eEEEeecccCCCCHHHHHHHHHHHHHH
Q 010240 482 GVAVVSALFDRECILPESKKLHAVLMD 508 (514)
Q Consensus 482 gva~~~~i~~~~~~~~~~~~~~~~~~~ 508 (514)
++ +...-++.+....+...++.
T Consensus 119 ~~-----l~Kp~~~~~l~~~i~~~~~~ 140 (150)
T 4e7p_A 119 AY-----VLKERSIADLMQTLHTVLEG 140 (150)
T ss_dssp EE-----EETTSCHHHHHHHHHHHHTT
T ss_pred EE-----EecCCCHHHHHHHHHHHHcC
Confidence 65 33455666666666666543
No 440
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=79.16 E-value=50 Score=32.97 Aligned_cols=148 Identities=22% Similarity=0.168 Sum_probs=83.4
Q ss_pred CHHHHHHHHHhCCCCEEEEEcCCC--------------CHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEe
Q 010240 319 SITDAVKAALEGGATIIQLREKDA--------------DTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHL 384 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v~lr~~~~--------------~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl 384 (514)
...+.+..+++.|+..|+|-+... +.++..+.++..+......+..++|+-+.|.. .+. .+
T Consensus 168 ~v~~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~d~~IiARTDa~---~a~--l~ 242 (439)
T 3i4e_A 168 NAFELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMGTPTVLVARTDAE---AAD--LI 242 (439)
T ss_dssp HHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTT---TCC--EE
T ss_pred HHHHHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCcc---ccc--cc
Confidence 466788889999999999977642 35555555555554444456777776554421 111 11
Q ss_pred CCCCCCHHHHHhhcCCCcEEEEe--------cCCHHHHH---HhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHc
Q 010240 385 GQSDMPARTARALLGPDKIIGVS--------CKTPEEAH---QAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLA 453 (514)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~ig~s--------~~~~~e~~---~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~ 453 (514)
. .+.+. .....+.|.. ...++|+. .|+..|||.|++-+.. ..++.++++++.
T Consensus 243 ~-s~~d~------~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~GAD~if~E~~~----------~~~eei~~f~~~ 305 (439)
T 3i4e_A 243 T-SDIDD------NDKPYLTGERTVEGFFRTKPGLEQAISRGLAYAPYADLIWCETGK----------PDLEYAKKFAEA 305 (439)
T ss_dssp S-CCCCT------TTGGGEEEEECTTSCEEECCSHHHHHHHHHHHTTTCSEEEECCSS----------CCHHHHHHHHHH
T ss_pred c-ccccc------ccchhhcccCcccccccccCCHHHHHHHHHHHHhhCCEEEecCCC----------CCHHHHHHHHHH
Confidence 1 11111 0112233322 23455532 2344499999663211 246666666554
Q ss_pred ----CCCCEEEECCCCccc-------------HHHHHHCCCCCCceEEEeecccC
Q 010240 454 ----SKLPVVAIGGIGISN-------------ASDVMKIGVSNLKGVAVVSALFD 491 (514)
Q Consensus 454 ----~~~pv~a~GGi~~~~-------------~~~~~~~Ga~~~~gva~~~~i~~ 491 (514)
.+.++++.|..-.=| ..++.++|+. -+-+..+.+.
T Consensus 306 v~~~~P~~~l~~~~sPsfnw~~~~~~~~~~~f~~eL~~lGv~---~v~~~la~~r 357 (439)
T 3i4e_A 306 IHKQFPGKLLSYNCSPSFNWKKNLDDATIAKFQKELGAMGYK---FQFITLAGFH 357 (439)
T ss_dssp HHHHSTTCEEEEECCSSSCHHHHSCHHHHHTHHHHHHHHTCC---EEEETTHHHH
T ss_pred hcccCCceEEeeCCCCCCcCcccCCHHHHHHHHHHHHHcCCe---EEEeChHHHH
Confidence 456677755432233 6789999999 8888776663
No 441
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=78.93 E-value=9.2 Score=36.92 Aligned_cols=153 Identities=14% Similarity=0.076 Sum_probs=90.2
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEE-----cCcHHHHHhC----CCCeEEeCCCC
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLI-----NDRIDIALAC----DADGVHLGQSD 388 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v-----~~~~~~a~~~----ga~gvhl~~~~ 388 (514)
++-.++++.+.+.|++.|++-.+..++.++.. ++++.+.. -+.++.. ..+++.+.++ |.+.||+....
T Consensus 28 ~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~-v~~i~~~~--~~~~i~~l~r~~~~~i~~a~~al~~ag~~~v~i~~s~ 104 (325)
T 3eeg_A 28 EEKIIVAKALDELGVDVIEAGFPVSSPGDFNS-VVEITKAV--TRPTICALTRAKEADINIAGEALRFAKRSRIHTGIGS 104 (325)
T ss_dssp THHHHHHHHHHHHTCSEEEEECTTSCHHHHHH-HHHHHHHC--CSSEEEEECCSCHHHHHHHHHHHTTCSSEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCCHhHHHH-HHHHHHhC--CCCEEEEeecCCHHHHHHHHHhhcccCCCEEEEEecc
Confidence 56788888899999999999988778776533 34444432 2444432 1246667777 88888763211
Q ss_pred CC------------------HHHHHhhcCCCcEEEEec-----CCHHH----HHHhhhCCCcEEEeccccCCCCCCCCcc
Q 010240 389 MP------------------ARTARALLGPDKIIGVSC-----KTPEE----AHQAWIDGANYIGCGGVYPTNTKANNLT 441 (514)
Q Consensus 389 ~~------------------~~~~~~~~~~~~~ig~s~-----~~~~e----~~~a~~~g~d~v~~~~vf~t~~k~~~~~ 441 (514)
-+ ...++.....+..+..+| ++++. ++.+.+.|+|.|.+. +|. ....|
T Consensus 105 Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~---DT~--G~~~P 179 (325)
T 3eeg_A 105 SDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGRADQAFLARMVEAVIEAGADVVNIP---DTT--GYMLP 179 (325)
T ss_dssp SHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGGGSCHHHHHHHHHHHHHHTCSEEECC---BSS--SCCCH
T ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccccccchHHHHHHHHHHHHhcCCCEEEec---Ccc--CCcCH
Confidence 00 111222334455555555 45554 455668899999553 221 11221
Q ss_pred CC-HHHHHHHHHcCC----CCEEEE----CCCCcccHHHHHHCCCC
Q 010240 442 VG-LDGLKTVCLASK----LPVVAI----GGIGISNASDVMKIGVS 478 (514)
Q Consensus 442 ~g-~~~l~~~~~~~~----~pv~a~----GGi~~~~~~~~~~~Ga~ 478 (514)
.. .+.++++++.++ +|+-.= -|....|.-..+++|++
T Consensus 180 ~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~aGa~ 225 (325)
T 3eeg_A 180 WQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQNGAR 225 (325)
T ss_dssp HHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHHHhCCC
Confidence 12 256677777664 444332 34456678889999999
No 442
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=78.81 E-value=15 Score=34.26 Aligned_cols=41 Identities=22% Similarity=0.110 Sum_probs=30.6
Q ss_pred HHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCC
Q 010240 412 EEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGI 464 (514)
Q Consensus 412 ~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi 464 (514)
++++...++|||.+++=. ...+..+++.+.+++|++.+|.=
T Consensus 165 ~rA~a~~eAGA~~ivlE~------------vp~~~a~~it~~l~iP~igIGaG 205 (275)
T 1o66_A 165 NDAKAHDDAGAAVVLMEC------------VLAELAKKVTETVSCPTIGIGAG 205 (275)
T ss_dssp HHHHHHHHTTCSEEEEES------------CCHHHHHHHHHHCSSCEEEESSC
T ss_pred HHHHHHHHcCCcEEEEec------------CCHHHHHHHHHhCCCCEEEECCC
Confidence 346677799999997622 12466788888899999999854
No 443
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=78.57 E-value=9.8 Score=35.06 Aligned_cols=127 Identities=17% Similarity=0.105 Sum_probs=75.9
Q ss_pred cHHHHHhCCCCeEEeCCCC------CCHH----HHHhhcCCCcEEEEecC-CHHHH-------------HHhh----hCC
Q 010240 370 RIDIALACDADGVHLGQSD------MPAR----TARALLGPDKIIGVSCK-TPEEA-------------HQAW----IDG 421 (514)
Q Consensus 370 ~~~~a~~~ga~gvhl~~~~------~~~~----~~~~~~~~~~~ig~s~~-~~~e~-------------~~a~----~~g 421 (514)
.+....++|+++|-++.+. .... +.+..+..++.+.+-+. +.+|- ..+. ...
T Consensus 78 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~ 157 (247)
T 1ney_A 78 SVDQIKDVGAKYVILGHSERRSYFHEDDKFIADKTKFALGQGVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDFT 157 (247)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHTTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHCCCCT
T ss_pred CHHHHHHcCCCEEEECChhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHHCCCHHHHHHHHHHHHHhchhhhc
Confidence 4667777888888776532 1112 33444556777766665 44432 1122 233
Q ss_pred CcEEEeccccCCCCCCCCccCCH----HHHHHHHHc-------CCCCEEEECCCCcccHHHHHHCCCCCCceEEEeeccc
Q 010240 422 ANYIGCGGVYPTNTKANNLTVGL----DGLKTVCLA-------SKLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 422 ~d~v~~~~vf~t~~k~~~~~~g~----~~l~~~~~~-------~~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~ 490 (514)
-.+|.+=|+..-.|...+++-.. ..++.+... -.++|+==|+++++|+.+++... +|||+-+|++-+
T Consensus 158 ~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~N~~~l~~~~--diDG~LVGgAsL 235 (247)
T 1ney_A 158 NVVVAYEPVXAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKA--DVDGFLVGGASL 235 (247)
T ss_dssp TEEEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCEEEESSCCTTTGGGGTTCT--TCCEEEESGGGG
T ss_pred CEEEEECChhhcCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccceEEEcCCcCHhHHHHHHcCC--CCCeeEeehHHH
Confidence 45777778887555433322111 223322111 14899999999999998887642 444999999999
Q ss_pred CCCCHHHHH
Q 010240 491 DRECILPES 499 (514)
Q Consensus 491 ~~~~~~~~~ 499 (514)
+ +++.+.+
T Consensus 236 ~-~~F~~Ii 243 (247)
T 1ney_A 236 K-PEFVDII 243 (247)
T ss_dssp S-THHHHHH
T ss_pred H-HHHHHHH
Confidence 8 7776654
No 444
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=78.55 E-value=5.1 Score=38.08 Aligned_cols=49 Identities=8% Similarity=0.133 Sum_probs=35.0
Q ss_pred CCHHHHHHHHHhCCCCEEEEE-----cCCCCHHHHHHHHHHHHHHHhhcCceEEE
Q 010240 318 RSITDAVKAALEGGATIIQLR-----EKDADTRGFLEAAKACLQICCVHGVPLLI 367 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~v 367 (514)
+.+.+.++.+++.|++.+.+- ...++.+|..+.++...+.+.. ++++++
T Consensus 22 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pvi~ 75 (291)
T 3a5f_A 22 DKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNK-RIPVIA 75 (291)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEE
Confidence 457788888999999998873 3467888888777776665432 455554
No 445
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=78.38 E-value=14 Score=35.36 Aligned_cols=157 Identities=14% Similarity=0.029 Sum_probs=84.8
Q ss_pred ceEEEEeCCCCCccC--CCCHHHHHHHHHhCCCCEEEEEc----CCCC--------HHHHHHHHHHHHHHHhhcCceEEE
Q 010240 302 LFLYAVTDSGMNKKW--GRSITDAVKAALEGGATIIQLRE----KDAD--------TRGFLEAAKACLQICCVHGVPLLI 367 (514)
Q Consensus 302 ~~ly~it~~~~~~~~--~~~~~~~~~~~~~~Gv~~v~lr~----~~~~--------~~~~~~~~~~~~~~~~~~~~~l~v 367 (514)
+.+.-+||+++...+ .+...+.+++.++.|+++|=+=- +... .+|+.+....+..+.+..++++.|
T Consensus 31 MGIlNvTpDSFsd~~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISI 110 (314)
T 3tr9_A 31 MGIINVSPNSFYHPHLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISV 110 (314)
T ss_dssp EEEEECSTTCSBCBCCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEE
T ss_pred EEEEeCCCCchhhccCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEE
Confidence 567778887765422 23466777788899999998853 2222 334444444444455556889988
Q ss_pred cCc----HHHHHhCCCCeEEeCCC--CCCHHHHHhhcCCCcEEEEecCCH--------------------HHHHHhhhCC
Q 010240 368 NDR----IDIALACDADGVHLGQS--DMPARTARALLGPDKIIGVSCKTP--------------------EEAHQAWIDG 421 (514)
Q Consensus 368 ~~~----~~~a~~~ga~gvhl~~~--~~~~~~~~~~~~~~~~ig~s~~~~--------------------~e~~~a~~~g 421 (514)
..+ .+.|.++|++-|---+. +......-..++...++...-.+| +.+..|.+.|
T Consensus 111 DT~~~~Va~aAl~aGa~iINDVsg~~~~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~G 190 (314)
T 3tr9_A 111 DTSRPRVMREAVNTGADMINDQRALQLDDALTTVSALKTPVCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAG 190 (314)
T ss_dssp ECSCHHHHHHHHHHTCCEEEETTTTCSTTHHHHHHHHTCCEEEECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eCCCHHHHHHHHHcCCCEEEECCCCCchHHHHHHHHhCCeEEEECCCCCCcccccccccchHHHHHHHHHHHHHHHHHcC
Confidence 652 34566778887643222 223333333344555554322121 1245678899
Q ss_pred Cc--EEEeccccCC--CCCCCCccCCHHHHHHHHH--cCCCCEEE
Q 010240 422 AN--YIGCGGVYPT--NTKANNLTVGLDGLKTVCL--ASKLPVVA 460 (514)
Q Consensus 422 ~d--~v~~~~vf~t--~~k~~~~~~g~~~l~~~~~--~~~~pv~a 460 (514)
.+ -|++=|-|-. ..|.. .-.++.++.+.. .++.|++.
T Consensus 191 I~~~~IilDPG~G~~~F~Kt~--~~n~~lL~~l~~l~~lg~PvL~ 233 (314)
T 3tr9_A 191 ISEDRIIIDPGFGQGNYGKNV--SENFYLLNKLPEFVAMGLPVLS 233 (314)
T ss_dssp CCGGGEEEECCCCSGGGCCCH--HHHHHHHHTTHHHHTTSSCBEE
T ss_pred CCHhHEEEeCCCCchhhcCCH--HHHHHHHHHHHHHhcCCCCEEE
Confidence 85 4556554421 22211 113444444332 35889776
No 446
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=78.31 E-value=15 Score=34.53 Aligned_cols=155 Identities=14% Similarity=0.072 Sum_probs=83.3
Q ss_pred ceEEEEeCCCCCcc--C--CCCHHHHHHHHHhCCCCEEEEEcCC--C------CHHHHHHHHHHHHHHHhhcCceEEEcC
Q 010240 302 LFLYAVTDSGMNKK--W--GRSITDAVKAALEGGATIIQLREKD--A------DTRGFLEAAKACLQICCVHGVPLLIND 369 (514)
Q Consensus 302 ~~ly~it~~~~~~~--~--~~~~~~~~~~~~~~Gv~~v~lr~~~--~------~~~~~~~~~~~~~~~~~~~~~~l~v~~ 369 (514)
|.+.-+||.++... + .+...+.+++.++.|+++|=+--.+ + ..+|+.+....+..+.+. ++++.|..
T Consensus 9 mgilN~TpDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~-~~piSIDT 87 (280)
T 1eye_A 9 MGVLNVTDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-GITVSIDT 87 (280)
T ss_dssp EEEEECSCCTTCSSCCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT-TCCEEEEC
T ss_pred EEEEeCCCCCcCCCcccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC-CCEEEEeC
Confidence 56667788665431 1 2446777788889999999885421 1 144455555555554443 88898865
Q ss_pred c----HHHHHhCCCCeEE-eCCC--CCCHHHHHhhcCCCcEEEEecC-------------C-----H----HHHHHhhhC
Q 010240 370 R----IDIALACDADGVH-LGQS--DMPARTARALLGPDKIIGVSCK-------------T-----P----EEAHQAWID 420 (514)
Q Consensus 370 ~----~~~a~~~ga~gvh-l~~~--~~~~~~~~~~~~~~~~ig~s~~-------------~-----~----~e~~~a~~~ 420 (514)
+ .+.|+++|++-|- +... +......-..++...++...-. + . +.+..|.+.
T Consensus 88 ~~~~va~aAl~aGa~iINdvsg~~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~~ 167 (280)
T 1eye_A 88 MRADVARAALQNGAQMVNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAA 167 (280)
T ss_dssp SCHHHHHHHHHTTCCEEEETTTTSSCTTHHHHHHHHTCCEEEECCCCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhCCeEEEEcCCCCCcchhhcCcchhHHHHHHHHHHHHHHHHHHHc
Confidence 3 3466788998773 3322 3333333334455555553310 1 1 235567788
Q ss_pred CCc--EEEeccccCCCCCCCCccCCHHHHHHHHHc--CCCCEEE
Q 010240 421 GAN--YIGCGGVYPTNTKANNLTVGLDGLKTVCLA--SKLPVVA 460 (514)
Q Consensus 421 g~d--~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~--~~~pv~a 460 (514)
|.+ -|++=|-+- ..|. ..-.++.|+.+... ++.|++.
T Consensus 168 Gi~~~~IilDPg~G-f~k~--~~~n~~ll~~l~~~~~~g~Pvl~ 208 (280)
T 1eye_A 168 GVDPARLVLDPGLG-FAKT--AQHNWAILHALPELVATGIPVLV 208 (280)
T ss_dssp TCCGGGEEEECCTT-SSCC--HHHHHHHHHTHHHHHTTSSCBEE
T ss_pred CCChhhEEEECCCC-cccC--HHHHHHHHHHHHHhhcCCCCEEE
Confidence 987 465655432 1221 11234444444332 5788765
No 447
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=78.22 E-value=9.4 Score=37.55 Aligned_cols=26 Identities=12% Similarity=0.058 Sum_probs=22.0
Q ss_pred EecCCHHHHHHhhhCCCcEEEecccc
Q 010240 406 VSCKTPEEAHQAWIDGANYIGCGGVY 431 (514)
Q Consensus 406 ~s~~~~~e~~~a~~~g~d~v~~~~vf 431 (514)
-..+|.+++.++.+.|||.|.+|.-+
T Consensus 305 GGI~s~~da~~~l~~GAd~V~vgra~ 330 (367)
T 3zwt_A 305 GGVSSGQDALEKIRAGASLVQLYTAL 330 (367)
T ss_dssp SSCCSHHHHHHHHHHTCSEEEESHHH
T ss_pred CCCCCHHHHHHHHHcCCCEEEECHHH
Confidence 35579999999999999999998644
No 448
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=78.09 E-value=7.7 Score=36.92 Aligned_cols=156 Identities=13% Similarity=0.051 Sum_probs=83.4
Q ss_pred ceEEEEeCCCCCccC----CCCHHHHHHHHHhCCCCEEEEEcCC--------CCHHHHHHHHHHHHHHHhhcCceEEEcC
Q 010240 302 LFLYAVTDSGMNKKW----GRSITDAVKAALEGGATIIQLREKD--------ADTRGFLEAAKACLQICCVHGVPLLIND 369 (514)
Q Consensus 302 ~~ly~it~~~~~~~~----~~~~~~~~~~~~~~Gv~~v~lr~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~v~~ 369 (514)
+.+.-+||.++...- .+...+.+++.++.|+++|-+--.+ ...+++.+....+..+....++++.|..
T Consensus 43 MgilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vpiSIDT 122 (297)
T 1tx2_A 43 MGILNVTPDSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPISIDT 122 (297)
T ss_dssp EEECCCCCCTTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEEC
T ss_pred EEEEeCCCCccccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCceEEEeC
Confidence 344445666554300 1346667788889999999997532 1245555555555555556689998865
Q ss_pred c----HHHHHhCCCCeEEe-CCC--CCCHHHHHhhcCCCcEEEEecCC------HH--------HHHHhhhCCCc--EEE
Q 010240 370 R----IDIALACDADGVHL-GQS--DMPARTARALLGPDKIIGVSCKT------PE--------EAHQAWIDGAN--YIG 426 (514)
Q Consensus 370 ~----~~~a~~~ga~gvhl-~~~--~~~~~~~~~~~~~~~~ig~s~~~------~~--------e~~~a~~~g~d--~v~ 426 (514)
+ .+.|.++|++-+-- ... +......-..++...++...-.+ .+ .+..|.+.|.+ -|+
T Consensus 123 ~~~~V~~aAl~aGa~iINdvsg~~~d~~m~~~aa~~g~~vVlmh~~G~p~y~d~v~ev~~~l~~~i~~a~~~GI~~~~Ii 202 (297)
T 1tx2_A 123 YKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKDAGVRDENII 202 (297)
T ss_dssp SCHHHHHHHHHHTCCEEEETTTTSSCTHHHHHHHHHTCCEEEECCCSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred CCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhCCcEEEEeCCCCCCcchHHHHHHHHHHHHHHHHHHcCCChhcEE
Confidence 3 34566779887743 222 22222233334455555432111 11 25567788987 466
Q ss_pred eccccCCCCCCCCccCCHHHHHHHHHc--CCCCEEE
Q 010240 427 CGGVYPTNTKANNLTVGLDGLKTVCLA--SKLPVVA 460 (514)
Q Consensus 427 ~~~vf~t~~k~~~~~~g~~~l~~~~~~--~~~pv~a 460 (514)
+=|-+-. .|.. .-.++.++.+... ++.|++.
T Consensus 203 lDPg~Gf-gk~~--~~n~~ll~~l~~l~~lg~Pvl~ 235 (297)
T 1tx2_A 203 LDPGIGF-AKTP--EQNLEAMRNLEQLNVLGYPVLL 235 (297)
T ss_dssp EECCTTS-SCCH--HHHHHHHHTGGGGGGGCSCBEE
T ss_pred EeCCCCc-CCCH--HHHHHHHHHHHHHHhCCCCEEE
Confidence 6554422 2211 1123444444322 4788554
No 449
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=78.01 E-value=19 Score=33.80 Aligned_cols=134 Identities=17% Similarity=0.213 Sum_probs=81.5
Q ss_pred HHHHHHHHHHhhcCceEEE----cCcHHHHHhCCCCeEEeCCCCCC-HHHHHhhcCCCcEEEEecC---CHHHHHHhh--
Q 010240 349 EAAKACLQICCVHGVPLLI----NDRIDIALACDADGVHLGQSDMP-ARTARALLGPDKIIGVSCK---TPEEAHQAW-- 418 (514)
Q Consensus 349 ~~~~~~~~~~~~~~~~l~v----~~~~~~a~~~ga~gvhl~~~~~~-~~~~~~~~~~~~~ig~s~~---~~~e~~~a~-- 418 (514)
+-.+.+.++|++.|++++. ..+++...++ +|.+-++..+.. ....+..-+.++.++.+.. |++|+..|.
T Consensus 73 ~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~-~d~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~A~~~ 151 (280)
T 2qkf_A 73 EGLKIFEKVKAEFGIPVITDVHEPHQCQPVAEV-CDVIQLPAFLARQTDLVVAMAKTGNVVNIKKPQFLSPSQMKNIVEK 151 (280)
T ss_dssp HHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH-CSEEEECGGGTTBHHHHHHHHHTCCEEEEECCTTSCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhh-CCEEEECcccccCHHHHHHHHcCCCcEEEECCCCCCHHHHHHHHHH
Confidence 4455677788899998876 3467777777 899999985432 2234444345677777664 778877665
Q ss_pred --hCCC-cEEEe--ccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEEE-----------CCCCc-------ccHHHHHH
Q 010240 419 --IDGA-NYIGC--GGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVAI-----------GGIGI-------SNASDVMK 474 (514)
Q Consensus 419 --~~g~-d~v~~--~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a~-----------GGi~~-------~~~~~~~~ 474 (514)
..|- +.+++ |.-|+ .......+..+..+++.+ +.||+.- ||-+. .-.....+
T Consensus 152 i~~~Gn~~i~L~~rg~~~~----~~~~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava 227 (280)
T 2qkf_A 152 FHEAGNGKLILCERGSSFG----YDNLVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQALDLALAGMA 227 (280)
T ss_dssp HHHTTCCCEEEEECCEECS----TTCEECCTTHHHHHHHHTTTCCEEEEHHHHCC----------CHHHHHHHHHHHHHT
T ss_pred HHHcCCCeEEEEECCCCCC----CCccccCHHHHHHHHHhCCCCCEEEECCCCccccCccccccCCchhhHHHHHHHHHH
Confidence 4675 44433 22221 111225677788888887 8999883 22221 22345567
Q ss_pred CCCCCCceEEEeeccc
Q 010240 475 IGVSNLKGVAVVSALF 490 (514)
Q Consensus 475 ~Ga~~~~gva~~~~i~ 490 (514)
.|++ |+.+=+-+.
T Consensus 228 ~Ga~---G~~IE~H~~ 240 (280)
T 2qkf_A 228 TRLA---GLFLESHPD 240 (280)
T ss_dssp TCCS---EEEEEC---
T ss_pred cCCC---EEEEeecCC
Confidence 8998 999988875
No 450
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=77.95 E-value=36 Score=31.67 Aligned_cols=133 Identities=17% Similarity=0.127 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHhhcCceEEE----cCcHHHHHhCCCCeEEeCCCCCC-HHHHHhhcCCCcEEEEecC---CHHHHHHhh-
Q 010240 348 LEAAKACLQICCVHGVPLLI----NDRIDIALACDADGVHLGQSDMP-ARTARALLGPDKIIGVSCK---TPEEAHQAW- 418 (514)
Q Consensus 348 ~~~~~~~~~~~~~~~~~l~v----~~~~~~a~~~ga~gvhl~~~~~~-~~~~~~~~~~~~~ig~s~~---~~~e~~~a~- 418 (514)
.+-.+.+.++|++.|++++. ..+++.+.+ .+|.+.++..+.. ....+..-+.+..++.+.. |++|+..|.
T Consensus 61 ~~GL~~l~~~~~e~Glp~~te~~d~~~~~~l~~-~vd~~~IgA~~~rn~~ll~~~a~~~~PV~lK~G~~~t~~e~~~Av~ 139 (267)
T 2nwr_A 61 EYGVKALRKVKEEFGLKITTDIHESWQAEPVAE-VADIIQIPAFLCRQTDLLLAAAKTGRAVNVKKGQFLAPWDTKNVVE 139 (267)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECSSGGGHHHHHT-TCSEEEECGGGTTCHHHHHHHHTTTSEEEEECCTTCCGGGGHHHHH
T ss_pred HHHHHHHHHHHHhcCCeEEEecCCHHhHHHHHh-cCCEEEECcccccCHHHHHHHHcCCCcEEEeCCCCCCHHHHHHHHH
Confidence 34455677788999999876 335666666 5899999984432 2344444456777877764 677766554
Q ss_pred ---hCCC-cEEEe--ccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEE---------------CCCC---cccHHHHHH
Q 010240 419 ---IDGA-NYIGC--GGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAI---------------GGIG---ISNASDVMK 474 (514)
Q Consensus 419 ---~~g~-d~v~~--~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~---------------GGi~---~~~~~~~~~ 474 (514)
..|- |.+++ |..|+ .......+..+..+++. . ||+.- +|-. ..-.....+
T Consensus 140 ~i~~~GN~~i~L~~rG~~~~----y~~~~~dl~~i~~lk~~-~-pVivD~sH~~q~p~G~s~hs~g~~~~~~~ia~aava 213 (267)
T 2nwr_A 140 KLKFGGAKEIYLTERGTTFG----YNNLVVDFRSLPIMKQW-A-KVIYDATHSVQLPGGLGDKSGGMREFIFPLIRAAVA 213 (267)
T ss_dssp HHHHTTCSSEEEEECCEECS----SSCEECCTTHHHHHTTT-S-EEEEETTGGGCCTTC------CCGGGHHHHHHHHHH
T ss_pred HHHHcCCCeEEEEECCCCCC----CCccccCHHHHHHHHHc-C-CEEEcCCcccccCCCcCcCCCCchhHHHHHHHHHHH
Confidence 4675 44433 22221 11112566667777665 5 88774 3311 122345668
Q ss_pred CCCCCCceEEEeeccc
Q 010240 475 IGVSNLKGVAVVSALF 490 (514)
Q Consensus 475 ~Ga~~~~gva~~~~i~ 490 (514)
.|++ |+.+=+.+.
T Consensus 214 ~Ga~---G~mIE~H~~ 226 (267)
T 2nwr_A 214 VGCD---GVFMETHPE 226 (267)
T ss_dssp HCCS---EEEEEEESC
T ss_pred cCCC---EEEEEecCC
Confidence 8999 999988875
No 451
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=77.42 E-value=18 Score=28.79 Aligned_cols=88 Identities=17% Similarity=0.104 Sum_probs=62.1
Q ss_pred ecCCHHHHHHhh-hCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEEECCCC-cccHHHHHHCCCCCCceE
Q 010240 407 SCKTPEEAHQAW-IDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVAIGGIG-ISNASDVMKIGVSNLKGV 483 (514)
Q Consensus 407 s~~~~~e~~~a~-~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gv 483 (514)
.+.+.+++.... +...|.|++.--.+. .-|++.++++++.. ++||+.+.+-. .+....++++|++ ++
T Consensus 36 ~~~~~~~a~~~l~~~~~dlvi~d~~l~~-------~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~---~~ 105 (137)
T 3hdg_A 36 SAGDGEEGERLFGLHAPDVIITDIRMPK-------LGGLEMLDRIKAGGAKPYVIVISAFSEMKYFIKAIELGVH---LF 105 (137)
T ss_dssp EESSHHHHHHHHHHHCCSEEEECSSCSS-------SCHHHHHHHHHHTTCCCEEEECCCCCCHHHHHHHHHHCCS---EE
T ss_pred EECCHHHHHHHHhccCCCEEEEeCCCCC-------CCHHHHHHHHHhcCCCCcEEEEecCcChHHHHHHHhCCcc---ee
Confidence 366777765543 456899988764442 23788999998765 78999988765 5667789999999 64
Q ss_pred EEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 484 AVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 484 a~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
+...-++.+....+.+..+..
T Consensus 106 -----l~kP~~~~~l~~~i~~~~~~~ 126 (137)
T 3hdg_A 106 -----LPKPIEPGRLMETLEDFRHIK 126 (137)
T ss_dssp -----CCSSCCHHHHHHHHHHHHHHH
T ss_pred -----EcCCCCHHHHHHHHHHHHHHH
Confidence 455567777777776666553
No 452
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=77.28 E-value=25 Score=33.22 Aligned_cols=134 Identities=19% Similarity=0.209 Sum_probs=83.2
Q ss_pred HHHHHHHHHHhhcCceEEE----cCcHHHHHhCCCCeEEeCCCCCC-HHHHHhhcCCCcEEEEecC---CHHHHHHhh--
Q 010240 349 EAAKACLQICCVHGVPLLI----NDRIDIALACDADGVHLGQSDMP-ARTARALLGPDKIIGVSCK---TPEEAHQAW-- 418 (514)
Q Consensus 349 ~~~~~~~~~~~~~~~~l~v----~~~~~~a~~~ga~gvhl~~~~~~-~~~~~~~~~~~~~ig~s~~---~~~e~~~a~-- 418 (514)
+-.+.+.++|++.|++++. ...++.+.+ .++.+-++..+.. ...++..-+.++.++.+.. |++|+..|.
T Consensus 76 ~gl~~l~~~~~~~Glp~~te~~d~~~~~~l~~-~vd~~kIgA~~~~n~~Ll~~~a~~~kPV~lk~G~~~t~~ei~~Av~~ 154 (292)
T 1o60_A 76 EGLKIFQELKDTFGVKIITDVHEIYQCQPVAD-VVDIIQLPAFLARQTDLVEAMAKTGAVINVKKPQFLSPSQMGNIVEK 154 (292)
T ss_dssp HHHHHHHHHHHHHCCEEEEECCSGGGHHHHHT-TCSEEEECGGGTTCHHHHHHHHHTTCEEEEECCTTSCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEecCCHHHHHHHHh-cCCEEEECcccccCHHHHHHHHcCCCcEEEeCCCCCCHHHHHHHHHH
Confidence 4455677788999999876 345666666 6899999984432 2234444345667777664 778876665
Q ss_pred --hCCCcEE-Ee--ccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEE-----------E----CCCC---cccHHHHHH
Q 010240 419 --IDGANYI-GC--GGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVA-----------I----GGIG---ISNASDVMK 474 (514)
Q Consensus 419 --~~g~d~v-~~--~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a-----------~----GGi~---~~~~~~~~~ 474 (514)
..|-+.+ ++ |.-|+ .......+..+..+++.+ +.||+. . +|.. ..-.....+
T Consensus 155 i~~~Gn~~i~L~~rg~~~~----y~~~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva 230 (292)
T 1o60_A 155 IEECGNDKIILCDRGTNFG----YDNLIVDMLGFSVMKKASKGSPVIFDVTHSLQCRDPFGAASSGRRAQVTELARSGLA 230 (292)
T ss_dssp HHHTTCCCEEEEECCEECS----TTCEECCTTHHHHHHHHTTSCCEEEEHHHHCC------------CTTHHHHHHHHHH
T ss_pred HHHcCCCeEEEEECCCCCC----CCccccCHHHHHHHHhhCCCCCEEEECCCcccccCccccCCCCChhHHHHHHHHHHH
Confidence 4676444 33 22221 111225777788888887 899888 2 2321 122345677
Q ss_pred CCCCCCceEEEeeccc
Q 010240 475 IGVSNLKGVAVVSALF 490 (514)
Q Consensus 475 ~Ga~~~~gva~~~~i~ 490 (514)
.||+ |+.+=+-+.
T Consensus 231 ~Ga~---Gl~IE~H~~ 243 (292)
T 1o60_A 231 VGIA---GLFLEAHPN 243 (292)
T ss_dssp HCCS---EEEEEEESS
T ss_pred cCCC---EEEEEecCC
Confidence 8999 999998874
No 453
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=77.27 E-value=14 Score=30.05 Aligned_cols=88 Identities=17% Similarity=0.252 Sum_probs=61.3
Q ss_pred ecCCHHHHHHhh-hCCCcEEEeccccCCCCCCCCccCCHHHHHHHHH--c-CCCCEEEECCCC-cccHHHHHHCCCCCCc
Q 010240 407 SCKTPEEAHQAW-IDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCL--A-SKLPVVAIGGIG-ISNASDVMKIGVSNLK 481 (514)
Q Consensus 407 s~~~~~e~~~a~-~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~--~-~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~ 481 (514)
.+.+.+++.... +...|.|++.--.+. .-|++.++.+++ . .++||+++.+-. .+....+++.|++
T Consensus 37 ~~~~~~~a~~~l~~~~~dlii~d~~l~~-------~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~--- 106 (147)
T 2zay_A 37 QCGNAIEAVPVAVKTHPHLIITEANMPK-------ISGMDLFNSLKKNPQTASIPVIALSGRATAKEEAQLLDMGFI--- 106 (147)
T ss_dssp EESSHHHHHHHHHHHCCSEEEEESCCSS-------SCHHHHHHHHHTSTTTTTSCEEEEESSCCHHHHHHHHHHTCS---
T ss_pred EeCCHHHHHHHHHcCCCCEEEEcCCCCC-------CCHHHHHHHHHcCcccCCCCEEEEeCCCCHHHHHHHHhCCCC---
Confidence 567777766544 446899988754442 237889999987 3 378998887764 5667888999999
Q ss_pred eEEEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 482 GVAVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 482 gva~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
++ +...-++.+....+...++..
T Consensus 107 ~~-----l~kp~~~~~L~~~i~~~~~~~ 129 (147)
T 2zay_A 107 DF-----IAKPVNAIRLSARIKRVLKLL 129 (147)
T ss_dssp EE-----EESSCCHHHHHHHHHHHHHHH
T ss_pred EE-----EeCCCCHHHHHHHHHHHHHHH
Confidence 65 345556777767776666554
No 454
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=77.17 E-value=10 Score=36.36 Aligned_cols=116 Identities=19% Similarity=0.105 Sum_probs=67.1
Q ss_pred CCCHHHHHHHHHhCCCCEEEEEcC-----CCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCH
Q 010240 317 GRSITDAVKAALEGGATIIQLREK-----DADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPA 391 (514)
Q Consensus 317 ~~~~~~~~~~~~~~Gv~~v~lr~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~ 391 (514)
.+.+.+.++.+++.|++.+.+--. .++.+|..++++...+.+. -+++
T Consensus 27 ~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~-grvp--------------------------- 78 (311)
T 3h5d_A 27 FDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVN-GRVP--------------------------- 78 (311)
T ss_dssp TTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSC-SSSC---------------------------
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCc---------------------------
Confidence 366888888999999998877432 4566666666555544331 1223
Q ss_pred HHHHhhcCCCcEEEEecCC----HHHHHHhhhCCC-cEEEeccccCCCCCCCCccCC-HHHHHHHHHcCCCCEEEEC---
Q 010240 392 RTARALLGPDKIIGVSCKT----PEEAHQAWIDGA-NYIGCGGVYPTNTKANNLTVG-LDGLKTVCLASKLPVVAIG--- 462 (514)
Q Consensus 392 ~~~~~~~~~~~~ig~s~~~----~~e~~~a~~~g~-d~v~~~~vf~t~~k~~~~~~g-~~~l~~~~~~~~~pv~a~G--- 462 (514)
.++|+++.+ .+.++.|.+.|+ |.+.+.|-+.. |+. .-+ .++++.+.+..++||+.-=
T Consensus 79 ----------ViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P~y~--~~s--~~~l~~~f~~va~a~~lPiilYn~P~ 144 (311)
T 3h5d_A 79 ----------LIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPYYN--KPS--QEGMYQHFKAIADASDLPIIIYNIPG 144 (311)
T ss_dssp ----------EEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECCCSS--CCC--HHHHHHHHHHHHHSCSSCEEEEECHH
T ss_pred ----------EEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCCCCC--CCC--HHHHHHHHHHHHHhCCCCEEEEeccc
Confidence 344444433 333556777776 87766543321 221 123 3667777777778877652
Q ss_pred --CC--CcccHHHHHH
Q 010240 463 --GI--GISNASDVMK 474 (514)
Q Consensus 463 --Gi--~~~~~~~~~~ 474 (514)
|+ +++.+.++.+
T Consensus 145 ~tg~~l~~~~~~~La~ 160 (311)
T 3h5d_A 145 RVVVELTPETMLRLAD 160 (311)
T ss_dssp HHSSCCCHHHHHHHHT
T ss_pred ccCCCCCHHHHHHHhc
Confidence 33 3555655554
No 455
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=77.04 E-value=12 Score=35.75 Aligned_cols=105 Identities=15% Similarity=0.122 Sum_probs=70.0
Q ss_pred HHHHHHHhCCCCEEEEEcCC----------CCHHHHHHHHHHHHHHHhhcCceEEE------c------Cc-------HH
Q 010240 322 DAVKAALEGGATIIQLREKD----------ADTRGFLEAAKACLQICCVHGVPLLI------N------DR-------ID 372 (514)
Q Consensus 322 ~~~~~~~~~Gv~~v~lr~~~----------~~~~~~~~~~~~~~~~~~~~~~~l~v------~------~~-------~~ 372 (514)
+-++++++.|++.|.+-.+. .+.++.++.++++.+.++++|..+-. . .+ .+
T Consensus 87 ~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~ 166 (302)
T 2ftp_A 87 KGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVAR 166 (302)
T ss_dssp HHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHH
T ss_pred HHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHH
Confidence 46788999999999885443 45667777788888889899987731 0 11 22
Q ss_pred HHHhCCCCeEEeCCCC--CCHH-------HHHhhcCCCcEEEEecCC-----HHHHHHhhhCCCcEEEe
Q 010240 373 IALACDADGVHLGQSD--MPAR-------TARALLGPDKIIGVSCKT-----PEEAHQAWIDGANYIGC 427 (514)
Q Consensus 373 ~a~~~ga~gvhl~~~~--~~~~-------~~~~~~~~~~~ig~s~~~-----~~e~~~a~~~g~d~v~~ 427 (514)
.+.+.|++.+.++... ..+. .+++.. ++..++.=+|| ......|.+.|++.|=.
T Consensus 167 ~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~-~~~~l~~H~Hn~~Gla~An~laAv~aGa~~vd~ 234 (302)
T 2ftp_A 167 ELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEV-PRERLAGHFHDTYGQALANIYASLLEGIAVFDS 234 (302)
T ss_dssp HHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTS-CGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEE
T ss_pred HHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhC-CCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEe
Confidence 3348899988876322 2222 222222 24567877774 66788999999999854
No 456
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=76.95 E-value=42 Score=31.61 Aligned_cols=133 Identities=19% Similarity=0.227 Sum_probs=83.1
Q ss_pred HHHHHHHHHHhhcCceEEE----cCcHHHHHhCCCCeEEeCCCCCC-HHHHHhhcCCCcEEEEecC---CHHHHHHhh--
Q 010240 349 EAAKACLQICCVHGVPLLI----NDRIDIALACDADGVHLGQSDMP-ARTARALLGPDKIIGVSCK---TPEEAHQAW-- 418 (514)
Q Consensus 349 ~~~~~~~~~~~~~~~~l~v----~~~~~~a~~~ga~gvhl~~~~~~-~~~~~~~~~~~~~ig~s~~---~~~e~~~a~-- 418 (514)
+-.+.++++|+++|++++. ..+++.+.++ +|.+.++..+.. ...++..-+.++.++.+.. |++|+..|.
T Consensus 75 ~GL~~L~~~~~e~Glp~~tev~d~~~v~~l~~~-vd~lkIgA~~~~n~~LLr~~a~~gkPVilK~G~~~t~~e~~~ave~ 153 (288)
T 3tml_A 75 EGLRILSEVKRQLGLPVLTDVHSIDEIEQVASV-VDVLQTPAFLCRQTDFIHACARSGKPVNIKKGQFLAPHDMKNVIDK 153 (288)
T ss_dssp HHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH-CSEEEECGGGTTCHHHHHHHHTSSSCEEEECCTTCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh-CCEEEECcccccCHHHHHHHHccCCcEEEeCCCCCCHHHHHHHHHH
Confidence 4556678889999998875 2357777777 999999985432 2234444445666666663 777766554
Q ss_pred --hCCC-------cEEEe--ccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEE---------------CCCC---cccH
Q 010240 419 --IDGA-------NYIGC--GGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAI---------------GGIG---ISNA 469 (514)
Q Consensus 419 --~~g~-------d~v~~--~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~---------------GGi~---~~~~ 469 (514)
+.|. +++++ |.-|+ ...-...+..+..+++ +++||+.. ||-. +.-.
T Consensus 154 i~~~Gn~~~~~~~~i~L~erg~~y~----~~~~~vdl~~i~~lk~-~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a 228 (288)
T 3tml_A 154 ARDAAREAGLSEDRFMACERGVSFG----YNNLVSDMRSLAIMRE-TNAPVVFDATHSVQLPGGQGTSSGGQREFVPVLA 228 (288)
T ss_dssp HHHHHHTTTCCSCCEEEEECCEECS----SSCEECCHHHHHHGGG-GSSCEEEEHHHHTCCCC--------CTTHHHHHH
T ss_pred HHHcCCCccCCCCcEEEEeCCCCCC----CCcCcCCHHHHHHHHh-cCCcEEEcCCcccccCCcccCCCCCchhhHHHHH
Confidence 3343 45544 22232 1111247888888887 89999762 3322 2234
Q ss_pred HHHHHCCCCCCceEEEeeccc
Q 010240 470 SDVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 470 ~~~~~~Ga~~~~gva~~~~i~ 490 (514)
.....+||+ |+.+=.-+.
T Consensus 229 ~AAvA~Gad---Gl~iE~H~~ 246 (288)
T 3tml_A 229 RAAVATGVA---GLFMETHPN 246 (288)
T ss_dssp HHHHHHCCS---EEEEEEESS
T ss_pred HHHHHcCCC---EEEEeeccC
Confidence 567788999 998877665
No 457
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=76.90 E-value=9.6 Score=34.47 Aligned_cols=92 Identities=9% Similarity=0.051 Sum_probs=59.7
Q ss_pred EecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHH---HcCCCCEEEE----CC-C--Cc-------cc
Q 010240 406 VSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVC---LASKLPVVAI----GG-I--GI-------SN 468 (514)
Q Consensus 406 ~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~---~~~~~pv~a~----GG-i--~~-------~~ 468 (514)
+-|.|++++..|.+.|||-|=+..-.. -.+ -......++.++ +..++||+++ || - +. ++
T Consensus 6 vc~~s~~~a~~A~~~GAdRIELc~~L~---~GG-lTPS~g~i~~~~~~~~~~~ipV~vMIRPR~GdF~Ys~~E~~~M~~D 81 (224)
T 2bdq_A 6 FCAENLTDLTRLDKAIISRVELCDNLA---VGG-TTPSYGVIKEANQYLHEKGISVAVMIRPRGGNFVYNDLELRIMEED 81 (224)
T ss_dssp EEEETTTTGGGCCTTTCCEEEEEBCGG---GTC-BCCCHHHHHHHHHHHHHTTCEEEEECCSSSSCSCCCHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHcCCCEEEEcCCcc---cCC-cCCCHHHHHHHHHhhhhcCCceEEEECCCCCCCcCCHHHHHHHHHH
Confidence 446788899999999999996642111 111 112456677777 7789999998 44 2 22 35
Q ss_pred HHHHHHCCCCCCceEEEeecccCCCCH-HHHHHHHHHH
Q 010240 469 ASDVMKIGVSNLKGVAVVSALFDRECI-LPESKKLHAV 505 (514)
Q Consensus 469 ~~~~~~~Ga~~~~gva~~~~i~~~~~~-~~~~~~~~~~ 505 (514)
+..++++|++ ||.+| ++.....+ .++.++|.+.
T Consensus 82 i~~~~~~Gad---GvV~G-~Lt~dg~iD~~~~~~Li~~ 115 (224)
T 2bdq_A 82 ILRAVELESD---ALVLG-ILTSNNHIDTEAIEQLLPA 115 (224)
T ss_dssp HHHHHHTTCS---EEEEC-CBCTTSSBCHHHHHHHHHH
T ss_pred HHHHHHcCCC---EEEEe-eECCCCCcCHHHHHHHHHH
Confidence 7889999999 99887 44433322 3444555443
No 458
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=76.73 E-value=26 Score=34.24 Aligned_cols=56 Identities=18% Similarity=0.095 Sum_probs=39.9
Q ss_pred HhCCCCeEEeCCCC---CCHHHHHhhcCCCcEEEEecCCHHHHHHhhhCC-CcEEEecccc
Q 010240 375 LACDADGVHLGQSD---MPARTARALLGPDKIIGVSCKTPEEAHQAWIDG-ANYIGCGGVY 431 (514)
Q Consensus 375 ~~~ga~gvhl~~~~---~~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g-~d~v~~~~vf 431 (514)
.+.|+|.+|+.... .....+++.... .+++..-.|++++.++.+.| +|.|.+|--+
T Consensus 260 ~~~Gvd~i~v~~~~~~~~~~~~ik~~~~i-Pvi~~Ggit~e~a~~~l~~G~aD~V~iGR~~ 319 (361)
T 3gka_A 260 GRRRIAFLFARESFGGDAIGQQLKAAFGG-PFIVNENFTLDSAQAALDAGQADAVAWGKLF 319 (361)
T ss_dssp HHTTCSEEEEECCCSTTCCHHHHHHHHCS-CEEEESSCCHHHHHHHHHTTSCSEEEESHHH
T ss_pred HHcCCCEEEECCCCCCHHHHHHHHHHcCC-CEEEeCCCCHHHHHHHHHcCCccEEEECHHh
Confidence 46799999987643 234556665543 35554445999999999988 9999998544
No 459
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=76.56 E-value=17 Score=30.00 Aligned_cols=89 Identities=10% Similarity=0.085 Sum_probs=63.0
Q ss_pred EecCCHHHHHHhh-hCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHc---CCCCEEEECCCC-cccHHHHHHCCCCCC
Q 010240 406 VSCKTPEEAHQAW-IDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLA---SKLPVVAIGGIG-ISNASDVMKIGVSNL 480 (514)
Q Consensus 406 ~s~~~~~e~~~a~-~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~---~~~pv~a~GGi~-~~~~~~~~~~Ga~~~ 480 (514)
..+.+.+++.... +...|.|++.--.|. .-|++.++++++. .++||+.+.+-. .+....++++|++
T Consensus 35 ~~~~~~~~al~~l~~~~~dlii~D~~l~~-------~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~-- 105 (154)
T 3gt7_A 35 EHVRNGREAVRFLSLTRPDLIISDVLMPE-------MDGYALCRWLKGQPDLRTIPVILLTILSDPRDVVRSLECGAD-- 105 (154)
T ss_dssp EEESSHHHHHHHHTTCCCSEEEEESCCSS-------SCHHHHHHHHHHSTTTTTSCEEEEECCCSHHHHHHHHHHCCS--
T ss_pred EEeCCHHHHHHHHHhCCCCEEEEeCCCCC-------CCHHHHHHHHHhCCCcCCCCEEEEECCCChHHHHHHHHCCCC--
Confidence 3466888876655 456899988765442 2378899998875 378988887754 6677889999999
Q ss_pred ceEEEeecccCCCCHHHHHHHHHHHHHHH
Q 010240 481 KGVAVVSALFDRECILPESKKLHAVLMDA 509 (514)
Q Consensus 481 ~gva~~~~i~~~~~~~~~~~~~~~~~~~~ 509 (514)
++ +...-++.+....+...++..
T Consensus 106 -~~-----l~KP~~~~~l~~~i~~~l~~~ 128 (154)
T 3gt7_A 106 -DF-----ITKPCKDVVLASHVKRLLSGV 128 (154)
T ss_dssp -EE-----EESSCCHHHHHHHHHHHHHHT
T ss_pred -EE-----EeCCCCHHHHHHHHHHHHHHH
Confidence 65 445567777777777776653
No 460
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=76.51 E-value=2.3 Score=42.65 Aligned_cols=67 Identities=15% Similarity=0.109 Sum_probs=50.6
Q ss_pred CHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEEECCCCcccHHHHHHCCCCCCceEEE
Q 010240 410 TPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVAIGGIGISNASDVMKIGVSNLKGVAV 485 (514)
Q Consensus 410 ~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~ 485 (514)
+.+.+..+.+.|+|++.+...+ +.+..-++.++++++.+ ++||++-++.+.+.+..+.++|++ +|.+
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~~------g~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad---~I~v 221 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSAH------GHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGAD---CLKV 221 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCSC------CSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCS---EEEE
T ss_pred HHHHHHHHHHCCCCEEEEeCCC------CChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCC---EEEE
Confidence 3566777888999999773211 11223467888888888 899998566678889999999999 9999
No 461
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=76.51 E-value=6.4 Score=33.71 Aligned_cols=86 Identities=17% Similarity=0.214 Sum_probs=51.3
Q ss_pred CHHHH-HHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHc-C-CCCEEEECCCCcccHHHHHHCCCCCCceEEEe
Q 010240 410 TPEEA-HQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLA-S-KLPVVAIGGIGISNASDVMKIGVSNLKGVAVV 486 (514)
Q Consensus 410 ~~~e~-~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~-~-~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~ 486 (514)
+++++ ..+.+.++|+|++|-.-.+ ....-.+.++.+++. . ++||+.-|-+..++...+.+.|++ ++...
T Consensus 57 p~e~lv~aa~~~~~diV~lS~~~~~-----~~~~~~~~i~~L~~~g~~~i~v~vGG~~~~~~~~~l~~~G~d---~v~~~ 128 (161)
T 2yxb_A 57 TPEQVAMAAVQEDVDVIGVSILNGA-----HLHLMKRLMAKLRELGADDIPVVLGGTIPIPDLEPLRSLGIR---EIFLP 128 (161)
T ss_dssp CHHHHHHHHHHTTCSEEEEEESSSC-----HHHHHHHHHHHHHHTTCTTSCEEEEECCCHHHHHHHHHTTCC---EEECT
T ss_pred CHHHHHHHHHhcCCCEEEEEeechh-----hHHHHHHHHHHHHhcCCCCCEEEEeCCCchhcHHHHHHCCCc---EEECC
Confidence 56664 4455789999998864331 111123445555554 2 578887666666677788899999 65322
Q ss_pred ecccCCCCHHHHHHHHHHHHHH
Q 010240 487 SALFDRECILPESKKLHAVLMD 508 (514)
Q Consensus 487 ~~i~~~~~~~~~~~~~~~~~~~ 508 (514)
..++.+.++.+++.+.+
T Consensus 129 -----~~~~~~~~~~~~~~~~~ 145 (161)
T 2yxb_A 129 -----GTSLGEIIEKVRKLAEE 145 (161)
T ss_dssp -----TCCHHHHHHHHHHHHHH
T ss_pred -----CCCHHHHHHHHHHHHHH
Confidence 22445556666655554
No 462
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=76.29 E-value=15 Score=34.78 Aligned_cols=87 Identities=16% Similarity=0.155 Sum_probs=64.7
Q ss_pred CCcEEEEecCCHHHHHHhhhCCCcEEEeccc-c--CCCCCCCCccCCHH----HHHHHHHcCCCCEEEEC----CCCcc-
Q 010240 400 PDKIIGVSCKTPEEAHQAWIDGANYIGCGGV-Y--PTNTKANNLTVGLD----GLKTVCLASKLPVVAIG----GIGIS- 467 (514)
Q Consensus 400 ~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~v-f--~t~~k~~~~~~g~~----~l~~~~~~~~~pv~a~G----Gi~~~- 467 (514)
...++..++++.-.++.+.+.|+|.+.+|-. . .....|+.....++ ..+.++...++||++-. |.+++
T Consensus 16 ~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~ 95 (295)
T 1xg4_A 16 ENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFN 95 (295)
T ss_dssp SSSEEEEECSSHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCSSSSHHH
T ss_pred CCcEEEecCcCHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCcccCCCHHH
Confidence 4578888999999999999999999999865 2 23455655556664 34555556689999986 54544
Q ss_pred ---cHHHHHHCCCCCCceEEEeecc
Q 010240 468 ---NASDVMKIGVSNLKGVAVVSAL 489 (514)
Q Consensus 468 ---~~~~~~~~Ga~~~~gva~~~~i 489 (514)
++..+.++|+. ||-+=...
T Consensus 96 ~~~~v~~l~~aGa~---gv~iEd~~ 117 (295)
T 1xg4_A 96 VARTVKSMIKAGAA---GLHIEDQV 117 (295)
T ss_dssp HHHHHHHHHHHTCS---EEEEECBC
T ss_pred HHHHHHHHHHcCCe---EEEECCCC
Confidence 56778889999 99886665
No 463
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=76.07 E-value=13 Score=36.72 Aligned_cols=58 Identities=14% Similarity=0.080 Sum_probs=38.7
Q ss_pred HHHhCCCCeEEeCCCC---------CC-HHHHHhhcCCCcEEEEecCCHHHHHHhhhCC-CcEEEecccc
Q 010240 373 IALACDADGVHLGQSD---------MP-ARTARALLGPDKIIGVSCKTPEEAHQAWIDG-ANYIGCGGVY 431 (514)
Q Consensus 373 ~a~~~ga~gvhl~~~~---------~~-~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g-~d~v~~~~vf 431 (514)
.+.+.|++++|+.... .. ...+++.... .+++..--+++++.++.+.| +|+|.+|--+
T Consensus 263 ~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~i-Pvi~~Ggi~~~~a~~~l~~g~aD~V~igR~~ 331 (377)
T 2r14_A 263 ELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKG-GLIYCGNYDAGRAQARLDDNTADAVAFGRPF 331 (377)
T ss_dssp HHHHTTCSEEEEECCC------CCCTTHHHHHHHHCCS-EEEEESSCCHHHHHHHHHTTSCSEEEESHHH
T ss_pred HHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCC-CEEEECCCCHHHHHHHHHCCCceEEeecHHH
Confidence 3447899999986531 11 2345555433 34454444899999999998 9999998544
No 464
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=75.97 E-value=8.5 Score=35.64 Aligned_cols=125 Identities=15% Similarity=0.129 Sum_probs=74.3
Q ss_pred cHHHHHhCCCCeEEeCCCCC------CH----HHHHhhcCCCcEEEEecC-CHHH-------------HHHhhhCCC--c
Q 010240 370 RIDIALACDADGVHLGQSDM------PA----RTARALLGPDKIIGVSCK-TPEE-------------AHQAWIDGA--N 423 (514)
Q Consensus 370 ~~~~a~~~ga~gvhl~~~~~------~~----~~~~~~~~~~~~ig~s~~-~~~e-------------~~~a~~~g~--d 423 (514)
.+....++|+++|-++.+.. .. .+.+..+..++.+.+-+. +.+| +..+. .+. +
T Consensus 82 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~V~~Kv~~Al~~GL~pIlCvGEtleere~g~t~~vv~~Ql~~~l-~~~~~~ 160 (254)
T 3m9y_A 82 SPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAV-AGLSED 160 (254)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHH-TTCCHH
T ss_pred CHHHHHHcCCCEEEECcccccCccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHHCCCHHHHHHHHHHHHH-hcCCHH
Confidence 46677788888887765321 11 123344556777766665 4442 33333 233 3
Q ss_pred -----EEEeccccCCCCCCCCccCCHH----HHHHHHH-c------CCCCEEEECCCCcccHHHHHH-CCCCCCceEEEe
Q 010240 424 -----YIGCGGVYPTNTKANNLTVGLD----GLKTVCL-A------SKLPVVAIGGIGISNASDVMK-IGVSNLKGVAVV 486 (514)
Q Consensus 424 -----~v~~~~vf~t~~k~~~~~~g~~----~l~~~~~-~------~~~pv~a~GGi~~~~~~~~~~-~Ga~~~~gva~~ 486 (514)
+|.+=|++.-.|...+++-..+ .++.+.. . -.++|+==|+++++|+.++++ .+.| |+-+|
T Consensus 161 ~~~~vvIAYEPvWAIGTG~~At~e~aqevh~~IR~~l~~~~~~~~a~~~rIlYGGSV~~~N~~~l~~~~diD---G~LVG 237 (254)
T 3m9y_A 161 QLKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDID---GALVG 237 (254)
T ss_dssp HHHHCEEEECCGGGCC--CCCCHHHHHHHHHHHHHHHHHHSCHHHHTTSEEEECSCCCTTTHHHHHTSTTCC---EEEES
T ss_pred HhCCEEEEECChhhhcCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCCccEEEcCCcCHHHHHHHHcCCCCC---eEEee
Confidence 7888888875543333322221 2343322 1 158999999999999999994 6555 99999
Q ss_pred ecccCCCCHHHH
Q 010240 487 SALFDRECILPE 498 (514)
Q Consensus 487 ~~i~~~~~~~~~ 498 (514)
++-+.+++..+.
T Consensus 238 gASL~~~~F~~I 249 (254)
T 3m9y_A 238 GASLKVEDFVQL 249 (254)
T ss_dssp GGGSSHHHHHHH
T ss_pred HHhhCHHHHHHH
Confidence 999865444433
No 465
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=75.88 E-value=23 Score=34.54 Aligned_cols=140 Identities=19% Similarity=0.162 Sum_probs=88.9
Q ss_pred HhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCC-CCCCHHHHHhhcCCCcEEEE
Q 010240 328 LEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQ-SDMPARTARALLGPDKIIGV 406 (514)
Q Consensus 328 ~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~-~~~~~~~~~~~~~~~~~ig~ 406 (514)
++.|.+.+.+--...+.++-++..+++.+.|+.+|+.+-.. +| +++. .+. .. .........
T Consensus 132 ~~~GFtSVMiDgS~lp~eENI~~Tk~vv~~ah~~gvsVEaE--------LG----~igG~Edg-v~--~~~~~~~~~--- 193 (357)
T 3qm3_A 132 GQALFSSHMLDLSEESLEENLSTCEVYLQKLDALGVALEIE--------LG----CTGGEEDG-VD--NTGIDNSKL--- 193 (357)
T ss_dssp SSCSCSEEECCCTTSCHHHHHHHHHHHHHHHHHHTCEEEEE--------CC----CCCC------C--CSSTTCTTT---
T ss_pred cCCCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEE--------ee----eeccccCC-cc--ccccccccc---
Confidence 34679999998888888888899999999999998877432 11 1111 110 00 000000111
Q ss_pred ecCCHHHHHHhhh-CC----CcEEEe--ccccCCCCCCCCccCCHHHHHHHHHc----------CCCCEEEECCC--Ccc
Q 010240 407 SCKTPEEAHQAWI-DG----ANYIGC--GGVYPTNTKANNLTVGLDGLKTVCLA----------SKLPVVAIGGI--GIS 467 (514)
Q Consensus 407 s~~~~~e~~~a~~-~g----~d~v~~--~~vf~t~~k~~~~~~g~~~l~~~~~~----------~~~pv~a~GGi--~~~ 467 (514)
-.+|+|+.+-.+ .| +|.+.+ |.+.- ..|++.+.+.++.|+++.+. .++|++-=||- ..+
T Consensus 194 -yT~Peea~~Fv~~tg~~~gvD~LAvaiGt~HG-~Yk~g~p~L~~~~L~~i~~~i~~~~~~~~~~~vpLVlHGgSG~p~e 271 (357)
T 3qm3_A 194 -YTQPEDVALAYERLGKISDKFSIAASFGNVHG-VYKPGNVSLQPEILKNSQKFVKDKFALNSDKPINFVFHGGSGSELK 271 (357)
T ss_dssp -SCCHHHHHHHHHHHTTTCSCEEEECCSSCCCS-SCCSSCCCCCTHHHHHHHHHHHHHTTCSCSCCSCEEECSCTTCCHH
T ss_pred -cCCHHHHHHHHHHhCCCCcccEEEEecCCccC-CcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCcEEEeCCCCCCHH
Confidence 347999887664 33 567655 33332 12333455788888887543 26899988865 478
Q ss_pred cHHHHHHCCCCCCceEEEeeccc
Q 010240 468 NASDVMKIGVSNLKGVAVVSALF 490 (514)
Q Consensus 468 ~~~~~~~~Ga~~~~gva~~~~i~ 490 (514)
++.++.+.|.. -|=+.+.+.
T Consensus 272 ~i~~ai~~GV~---KiNi~Tdl~ 291 (357)
T 3qm3_A 272 DIKNAVSYGVI---KMNIDTDTQ 291 (357)
T ss_dssp HHHHHHHTTEE---EEEECHHHH
T ss_pred HHHHHHHCCce---EEEechHHH
Confidence 89999999988 887777653
No 466
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=75.76 E-value=22 Score=28.98 Aligned_cols=87 Identities=16% Similarity=0.141 Sum_probs=59.4
Q ss_pred ecCCHHHHHHhhhC-C-CcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEEECCCC-cccHHHHHHCC-CCCCc
Q 010240 407 SCKTPEEAHQAWID-G-ANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVAIGGIG-ISNASDVMKIG-VSNLK 481 (514)
Q Consensus 407 s~~~~~e~~~a~~~-g-~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a~GGi~-~~~~~~~~~~G-a~~~~ 481 (514)
.+.+.+++...... . .|.|++.--.+. .-|++.++++++.. ++||+.+.+-. .+.+..+++.| ++
T Consensus 32 ~~~~~~~a~~~l~~~~~~dlvi~D~~l~~-------~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~--- 101 (151)
T 3kcn_A 32 TCESGPEALACIKKSDPFSVIMVDMRMPG-------MEGTEVIQKARLISPNSVYLMLTGNQDLTTAMEAVNEGQVF--- 101 (151)
T ss_dssp EESSHHHHHHHHHHSCCCSEEEEESCCSS-------SCHHHHHHHHHHHCSSCEEEEEECGGGHHHHHHHHHHTCCS---
T ss_pred EeCCHHHHHHHHHcCCCCCEEEEeCCCCC-------CcHHHHHHHHHhcCCCcEEEEEECCCCHHHHHHHHHcCCee---
Confidence 57788887776643 3 499988765442 23788888888755 78888876654 56678889999 88
Q ss_pred eEEEeecccCCCCHHHHHHHHHHHHHH
Q 010240 482 GVAVVSALFDRECILPESKKLHAVLMD 508 (514)
Q Consensus 482 gva~~~~i~~~~~~~~~~~~~~~~~~~ 508 (514)
++ +...-++.+....+...++.
T Consensus 102 ~~-----l~KP~~~~~L~~~i~~~l~~ 123 (151)
T 3kcn_A 102 RF-----LNKPCQMSDIKAAINAGIKQ 123 (151)
T ss_dssp EE-----EESSCCHHHHHHHHHHHHHH
T ss_pred EE-----EcCCCCHHHHHHHHHHHHHH
Confidence 55 34555666666666655544
No 467
>3gdm_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, K93R mutant, lyase, phosphoprotein; 1.60A {Saccharomyces cerevisiae} SCOP: c.1.2.3 PDB: 3gdl_A* 3gdk_A* 3gdt_A* 3gdr_A* 1dqw_A 1dqx_A*
Probab=75.62 E-value=3.9 Score=38.29 Aligned_cols=42 Identities=19% Similarity=0.222 Sum_probs=34.7
Q ss_pred cHHHHHHCCCCCCceEEEeecccC-CCCHHHHHHHHHHH-HHHHhhh
Q 010240 468 NASDVMKIGVSNLKGVAVVSALFD-RECILPESKKLHAV-LMDAVQR 512 (514)
Q Consensus 468 ~~~~~~~~Ga~~~~gva~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~ 512 (514)
+-.+++++|++ .+.||+.|++ ++||.++++++++. |+.+.+|
T Consensus 219 TP~~Ai~~GaD---~iVVGRpI~~~a~dP~~aa~~i~~~~w~ay~~~ 262 (267)
T 3gdm_A 219 TVDDVVSTGSD---IIIVGRGLFAKGRDAKVEGERYRKAGWEAYLRR 262 (267)
T ss_dssp EHHHHHHTTCS---EEEECGGGTSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHcCCC---EEEEChhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 46677899999 9999999999 99999999998754 5555444
No 468
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=75.59 E-value=15 Score=35.66 Aligned_cols=55 Identities=15% Similarity=0.055 Sum_probs=34.3
Q ss_pred hCCCCeEEeCCCC-----------CC---HHHHHhhcCCCcEEEEecCCHHHHHHhhhCC-CcEEEecccc
Q 010240 376 ACDADGVHLGQSD-----------MP---ARTARALLGPDKIIGVSCKTPEEAHQAWIDG-ANYIGCGGVY 431 (514)
Q Consensus 376 ~~ga~gvhl~~~~-----------~~---~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g-~d~v~~~~vf 431 (514)
+. +|.+|+.... .. ...+++..+...+..-..+|++++.++.+.| +|+|.+|--+
T Consensus 241 ~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~ 310 (343)
T 3kru_A 241 DK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNERADLVALGREL 310 (343)
T ss_dssp TT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTSCSEEEESHHH
T ss_pred cc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcCcccceeeeeeHHHHHHHHHhchhhHHHHHHHHH
Confidence 55 8999994221 11 1234444432323222346899999999988 9999998544
No 469
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=75.45 E-value=5 Score=37.72 Aligned_cols=38 Identities=18% Similarity=0.115 Sum_probs=30.8
Q ss_pred HHHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccC
Q 010240 393 TARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYP 432 (514)
Q Consensus 393 ~~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~ 432 (514)
.+++.......+|..++|++++.++ .|||-+++|..+-
T Consensus 196 ~vr~~~~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGSAi~ 233 (271)
T 1ujp_A 196 RIKARTALPVAVGFGVSGKATAAQA--AVADGVVVGSALV 233 (271)
T ss_dssp HHHTTCCSCEEEESCCCSHHHHHHH--TTSSEEEECHHHH
T ss_pred HHHhhcCCCEEEEcCCCCHHHHHHh--cCCCEEEEChHHh
Confidence 4555555678889999999999997 8999999997664
No 470
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=74.62 E-value=65 Score=31.54 Aligned_cols=114 Identities=7% Similarity=0.009 Sum_probs=71.4
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCcHHHHHhCCCCeEEeCCCCCCHHHHHhh
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPARTARAL 397 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~a~~~ga~gvhl~~~~~~~~~~~~~ 397 (514)
+++.+.+.++.+.|.+.+.+..-..+.+...+.++.+++.+ ..+..+.+.-+ ...
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a~-G~d~~l~vDan----------------~~~-------- 195 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTA-GSSITMILDAN----------------QSY-------- 195 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHH-CTTSEEEEECT----------------TCC--------
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhh-CCCCEEEEECC----------------CCC--------
Confidence 45667777888999999998654435555556666665543 12455655221 000
Q ss_pred cCCCcEEEEecCCHHH----HHHhhhC-CCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHH
Q 010240 398 LGPDKIIGVSCKTPEE----AHQAWID-GANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASD 471 (514)
Q Consensus 398 ~~~~~~ig~s~~~~~e----~~~a~~~-g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~ 471 (514)
|+++ ++...+. |.+|+= -| .++-.++.++++++.+++||.+-+.+. ++++.+
T Consensus 196 ------------~~~~a~~~~~~l~~~~~i~~iE-qP---------~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ 253 (382)
T 2gdq_A 196 ------------DAAAAFKWERYFSEWTNIGWLE-EP---------LPFDQPQDYAMLRSRLSVPVAGGENMKGPAQYVP 253 (382)
T ss_dssp ------------CHHHHHTTHHHHTTCSCEEEEE-CC---------SCSSCHHHHHHHHTTCSSCEEECTTCCSHHHHHH
T ss_pred ------------CHHHHHHHHHHHhhccCCeEEE-CC---------CCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHH
Confidence 2233 2233345 666651 11 223468899999988899999998885 788889
Q ss_pred HHHCCCC
Q 010240 472 VMKIGVS 478 (514)
Q Consensus 472 ~~~~Ga~ 478 (514)
+++.|+.
T Consensus 254 ~i~~~~~ 260 (382)
T 2gdq_A 254 LLSQRCL 260 (382)
T ss_dssp HHHTTCC
T ss_pred HHHcCCC
Confidence 9988744
No 471
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=74.58 E-value=19 Score=29.45 Aligned_cols=88 Identities=11% Similarity=-0.016 Sum_probs=61.4
Q ss_pred EecCCHHHHHHhh-hCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEEECCCC-cccHHHHHHCCCCCCce
Q 010240 406 VSCKTPEEAHQAW-IDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVAIGGIG-ISNASDVMKIGVSNLKG 482 (514)
Q Consensus 406 ~s~~~~~e~~~a~-~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a~GGi~-~~~~~~~~~~Ga~~~~g 482 (514)
..+.+.+|+.... +...|.|++.--.+. .-|++.++++++.. ++||+.+.+-. .+.+..++++|++ +
T Consensus 45 ~~~~~~~~a~~~l~~~~~dlii~d~~l~~-------~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~---~ 114 (152)
T 3eul_A 45 GEADDGAAALELIKAHLPDVALLDYRMPG-------MDGAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAA---G 114 (152)
T ss_dssp EEESSHHHHHHHHHHHCCSEEEEETTCSS-------SCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCS---E
T ss_pred EEeCCHHHHHHHHHhcCCCEEEEeCCCCC-------CCHHHHHHHHHhcCCCCeEEEEEccCCHHHHHHHHHcCCC---E
Confidence 3577877766544 556899988764442 23788999998765 78988887765 5667789999999 6
Q ss_pred EEEeecccCCCCHHHHHHHHHHHHHH
Q 010240 483 VAVVSALFDRECILPESKKLHAVLMD 508 (514)
Q Consensus 483 va~~~~i~~~~~~~~~~~~~~~~~~~ 508 (514)
+ +...-++.+....+...++.
T Consensus 115 ~-----l~Kp~~~~~l~~~i~~~~~~ 135 (152)
T 3eul_A 115 F-----LLKDSTRTEIVKAVLDCAKG 135 (152)
T ss_dssp E-----EETTCCHHHHHHHHHHHHHC
T ss_pred E-----EecCCCHHHHHHHHHHHHcC
Confidence 5 34555666666666666553
No 472
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=74.45 E-value=56 Score=31.52 Aligned_cols=84 Identities=13% Similarity=0.203 Sum_probs=52.0
Q ss_pred HHHHHHHHHhCCCCEEEEEcCC-----CCHHHHHHHHHH-HHHHHhhcCceEEEc------CcHHHHHhCCCCeEEeCCC
Q 010240 320 ITDAVKAALEGGATIIQLREKD-----ADTRGFLEAAKA-CLQICCVHGVPLLIN------DRIDIALACDADGVHLGQS 387 (514)
Q Consensus 320 ~~~~~~~~~~~Gv~~v~lr~~~-----~~~~~~~~~~~~-~~~~~~~~~~~l~v~------~~~~~a~~~ga~gvhl~~~ 387 (514)
..+.+++.+++|++.|++-+.. .+++.+.++..- ++++....+...+++ ..++...+.|++++++.+.
T Consensus 192 ~~~~~~~qi~aGad~i~i~D~~a~~~~lsp~~f~~f~~p~~k~i~~~~~~~~iih~~g~~~~~l~~~~~~g~d~i~~d~~ 271 (348)
T 4ay7_A 192 SIIYANAMVEAGADVIAIADPVASPDLMSPDSFRQFLKSRLQKFASSVNSVTVLHICGNVNPILSDMADCGFEGLSVEEK 271 (348)
T ss_dssp HHHHHHHHHHHTCSEEEEECGGGSTTTSCHHHHHHHHHHHHHHHHHHSSSEEEEECCSCCHHHHHHHHTSCCSEEECCGG
T ss_pred HHHHHHHHHhcCCCcceeeccccccccCCHHHHHHHhhHHHHHHHhhccCCcEEEecCCcHHHHHHHHHhccccccccch
Confidence 4556777889999999997752 567777776432 344454544433332 1345666789999887654
Q ss_pred CCCHHHHHhhcCCCcE
Q 010240 388 DMPARTARALLGPDKI 403 (514)
Q Consensus 388 ~~~~~~~~~~~~~~~~ 403 (514)
..+...+++.++....
T Consensus 272 ~~~~~~~k~~~g~~~~ 287 (348)
T 4ay7_A 272 IGSAKKGKEVIGTRAR 287 (348)
T ss_dssp GCCHHHHHHHHTTSSE
T ss_pred hhHHHHHHHHhCCCEE
Confidence 3345556665554443
No 473
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=74.40 E-value=29 Score=27.71 Aligned_cols=87 Identities=16% Similarity=0.043 Sum_probs=60.9
Q ss_pred ecCCHHHHHHhh-hCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEECCCC-cccHHHHHHCCCCCCceEE
Q 010240 407 SCKTPEEAHQAW-IDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIG-ISNASDVMKIGVSNLKGVA 484 (514)
Q Consensus 407 s~~~~~e~~~a~-~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gva 484 (514)
.+.+.+++.... ....|.+++.--.|. .-|++.++++++...+|++.+.+-. .+.+..+++.|++ ++
T Consensus 33 ~~~~~~~al~~~~~~~~dlvllD~~l~~-------~~g~~l~~~l~~~~~~~ii~ls~~~~~~~~~~~~~~ga~---~~- 101 (136)
T 2qzj_A 33 LAYNCEEAIGKIFSNKYDLIFLEIILSD-------GDGWTLCKKIRNVTTCPIVYMTYINEDQSILNALNSGGD---DY- 101 (136)
T ss_dssp EESSHHHHHHHHHHCCCSEEEEESEETT-------EEHHHHHHHHHTTCCCCEEEEESCCCHHHHHHHHHTTCC---EE-
T ss_pred EECCHHHHHHHHHhcCCCEEEEeCCCCC-------CCHHHHHHHHccCCCCCEEEEEcCCCHHHHHHHHHcCCc---EE-
Confidence 567777765543 456899988765542 1378888888875588988887654 5677889999999 65
Q ss_pred EeecccCCCCHHHHHHHHHHHHHH
Q 010240 485 VVSALFDRECILPESKKLHAVLMD 508 (514)
Q Consensus 485 ~~~~i~~~~~~~~~~~~~~~~~~~ 508 (514)
+...-++.+....++..++.
T Consensus 102 ----l~KP~~~~~L~~~l~~~~~~ 121 (136)
T 2qzj_A 102 ----LIKPLNLEILYAKVKAILRR 121 (136)
T ss_dssp ----EESSCCHHHHHHHHHHHHHH
T ss_pred ----EECCCCHHHHHHHHHHHHHH
Confidence 44555666666666666554
No 474
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=74.18 E-value=23 Score=28.25 Aligned_cols=88 Identities=13% Similarity=0.064 Sum_probs=60.6
Q ss_pred EecCCHHHHHHhh-hCCCcEEEeccccCCCCCCCCccCCHHHHHHHHH--c-CCCCEEEECCCC-cccHHHHHHCCCCCC
Q 010240 406 VSCKTPEEAHQAW-IDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCL--A-SKLPVVAIGGIG-ISNASDVMKIGVSNL 480 (514)
Q Consensus 406 ~s~~~~~e~~~a~-~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~--~-~~~pv~a~GGi~-~~~~~~~~~~Ga~~~ 480 (514)
..+.+.+++.... +...|.|++.--.+. .-|++.++++++ . .++||+++.+-. .+....+++.|++
T Consensus 38 ~~~~~~~~a~~~l~~~~~dlii~d~~l~~-------~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~-- 108 (143)
T 3cnb_A 38 KIAYNPFDAGDLLHTVKPDVVMLDLMMVG-------MDGFSICHRIKSTPATANIIVIAMTGALTDDNVSRIVALGAE-- 108 (143)
T ss_dssp EEECSHHHHHHHHHHTCCSEEEEETTCTT-------SCHHHHHHHHHTSTTTTTSEEEEEESSCCHHHHHHHHHTTCS--
T ss_pred EEECCHHHHHHHHHhcCCCEEEEecccCC-------CcHHHHHHHHHhCccccCCcEEEEeCCCCHHHHHHHHhcCCc--
Confidence 3467777765543 456899988754442 237888999987 3 378988887654 5667889999999
Q ss_pred ceEEEeecccCCCCHHHHHHHHHHHHHH
Q 010240 481 KGVAVVSALFDRECILPESKKLHAVLMD 508 (514)
Q Consensus 481 ~gva~~~~i~~~~~~~~~~~~~~~~~~~ 508 (514)
++ +...-++.+....++..++.
T Consensus 109 -~~-----l~kP~~~~~l~~~i~~~~~~ 130 (143)
T 3cnb_A 109 -TC-----FGKPLNFTLLEKTIKQLVEQ 130 (143)
T ss_dssp -EE-----EESSCCHHHHHHHHHHHHHT
T ss_pred -EE-----EeCCCCHHHHHHHHHHHHHh
Confidence 65 34455667776677666654
No 475
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=74.15 E-value=20 Score=33.69 Aligned_cols=150 Identities=10% Similarity=0.040 Sum_probs=79.3
Q ss_pred CceEEEEeCCCCCccCCCCHHHHHHHHHhCCCCEEEEEcCC--------CCHHHHHHHHHHHHHHHhhcCceEEEcCcHH
Q 010240 301 DLFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKD--------ADTRGFLEAAKACLQICCVHGVPLLINDRID 372 (514)
Q Consensus 301 ~~~ly~it~~~~~~~~~~~~~~~~~~~~~~Gv~~v~lr~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~ 372 (514)
+.++--++.-+.-....+.-..-++.+++.|++-|-+=.+- .+.+...+.++++++.|...-+++|+..
T Consensus 83 ~v~V~tVigFP~G~~~~e~K~~Ea~~Av~~GAdEIDmVinig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt--- 159 (297)
T 4eiv_A 83 GIKVCAAVNFPEGTGTPDTVSLEAVGALKDGADEIECLIDWRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSG--- 159 (297)
T ss_dssp GSEEEEEESTTTCCCCHHHHHHHHHHHHHTTCSEEEEECCTHHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCS---
T ss_pred CCeEEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEeeeeHHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEec---
Confidence 45666665543321001112223455888998877764442 2333445556666667743334555533
Q ss_pred HHHhCCCCeEEeCCCCCCHHH-HHhhcCCCcEEEEecCCHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHH
Q 010240 373 IALACDADGVHLGQSDMPART-ARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVC 451 (514)
Q Consensus 373 ~a~~~ga~gvhl~~~~~~~~~-~~~~~~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~ 451 (514)
..+...+ ++ .-.+.|.+.|+|||=.|.-|.+ .++..-....+++..
T Consensus 160 --------------~~Lt~~e~i~----------------~A~~ia~~AGADFVKTSTGf~~---~gAT~edV~lM~~~v 206 (297)
T 4eiv_A 160 --------------GELQGGDIIS----------------RAAVAALEGGADFLQTSSGLGA---THATMFTVHLISIAL 206 (297)
T ss_dssp --------------SCCCCHHHHH----------------HHHHHHHHHTCSEEECCCSSSS---CCCCHHHHHHHHHHH
T ss_pred --------------ccCCcHHHHH----------------HHHHHHHHhCCCEEEcCCCCCC---CCCCHHHHHHHHHHH
Confidence 1111111 11 1245566789999966665531 223322334444433
Q ss_pred H---------------------cCCCCEEEE-CCCC-cccHHHHHH-----------CCCCCCceEEEeecc
Q 010240 452 L---------------------ASKLPVVAI-GGIG-ISNASDVMK-----------IGVSNLKGVAVVSAL 489 (514)
Q Consensus 452 ~---------------------~~~~pv~a~-GGi~-~~~~~~~~~-----------~Ga~~~~gva~~~~i 489 (514)
+ .-++.|=|. |||. .+++..+++ .|+. -++..|.|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~tg~~vgvKAs~GGIrt~e~A~~~i~~~~elG~~wl~~~~f---RiGaSs~l 275 (297)
T 4eiv_A 207 REYMVRENERIRVEGINREGAAVRCIGIKIEVGDVHMAETADFLMQMIFENGPRSIVRDKF---RVGGGFNL 275 (297)
T ss_dssp HHHHCC------------------CCEEEEECTTCCHHHHHHHHHHHHHHHCGGGCSTTTE---EEEECHHH
T ss_pred HHHhccccccccccccccccccCCceeEEecCCCCCCHHHHHHHHHHHHHhCccccCCCce---EecccHHH
Confidence 2 125789999 9997 677777777 7776 77666633
No 476
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=74.06 E-value=10 Score=37.57 Aligned_cols=46 Identities=13% Similarity=0.057 Sum_probs=36.5
Q ss_pred CCHHHHHHHHHcC-CCCEEEECCCCcccHHHHHHCC-CCCCceEEEeeccc
Q 010240 442 VGLDGLKTVCLAS-KLPVVAIGGIGISNASDVMKIG-VSNLKGVAVVSALF 490 (514)
Q Consensus 442 ~g~~~l~~~~~~~-~~pv~a~GGi~~~~~~~~~~~G-a~~~~gva~~~~i~ 490 (514)
-.++.++++++.+ ++||++-+.++++++..+++.| ++ .|.+.+.|.
T Consensus 230 ~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~~~~d---~v~ikGGit 277 (389)
T 2oz8_A 230 HDHDGLRTLRHAVTWTQINSGEYLDLQGKRLLLEAHAAD---ILNVHGQVT 277 (389)
T ss_dssp TCHHHHHHHHHHCCSSEEEECTTCCHHHHHHHHHTTCCS---EEEECSCHH
T ss_pred cCHHHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHcCCCC---EEEECcCHH
Confidence 3688999999988 9999999999778889999888 45 666653333
No 477
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=73.79 E-value=10 Score=31.37 Aligned_cols=94 Identities=18% Similarity=0.044 Sum_probs=53.4
Q ss_pred CCCcE-EEEecCCHHHH-HHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHc-C-CCCEEEECCC--CcccH---
Q 010240 399 GPDKI-IGVSCKTPEEA-HQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLA-S-KLPVVAIGGI--GISNA--- 469 (514)
Q Consensus 399 ~~~~~-ig~s~~~~~e~-~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~-~-~~pv~a~GGi--~~~~~--- 469 (514)
+...+ +|..+ +++++ ..+.+.++|+|++|-.-.+. ...-.+.++.+++. . +++|+.-|.. .+++.
T Consensus 31 G~~Vi~lG~~~-p~e~~v~~a~~~~~d~v~lS~~~~~~-----~~~~~~~i~~l~~~g~~~i~v~vGG~~~~~~~~~~~~ 104 (137)
T 1ccw_A 31 GFNVVNIGVLS-PQELFIKAAIETKADAILVSSLYGQG-----EIDCKGLRQKCDEAGLEGILLYVGGNIVVGKQHWPDV 104 (137)
T ss_dssp TCEEEEEEEEE-CHHHHHHHHHHHTCSEEEEEECSSTH-----HHHHTTHHHHHHHTTCTTCEEEEEESCSSSSCCHHHH
T ss_pred CCEEEECCCCC-CHHHHHHHHHhcCCCEEEEEecCcCc-----HHHHHHHHHHHHhcCCCCCEEEEECCCcCchHhhhhh
Confidence 33333 55533 56664 45567899999998654311 00112345555553 3 5777655542 24554
Q ss_pred -HHHHHCCCCCCceEEEeecccCCCCHHHHHHHHHHHH
Q 010240 470 -SDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVL 506 (514)
Q Consensus 470 -~~~~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~ 506 (514)
..+.+.|++ ++.- ...++.+.++.+++.+
T Consensus 105 ~~~~~~~G~d---~~~~-----~g~~~~~~~~~l~~~~ 134 (137)
T 1ccw_A 105 EKRFKDMGYD---RVYA-----PGTPPEVGIADLKKDL 134 (137)
T ss_dssp HHHHHHTTCS---EECC-----TTCCHHHHHHHHHHHH
T ss_pred HHHHHHCCCC---EEEC-----CCCCHHHHHHHHHHHh
Confidence 348999999 5532 3346677777776654
No 478
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=73.78 E-value=7 Score=37.44 Aligned_cols=72 Identities=15% Similarity=0.156 Sum_probs=44.8
Q ss_pred CcEEEEecCCHHH----HHHhhhCCCcEEEeccccCCCCCCCCccCCH-HHHHHHHHcCCCCEEEEC-----C--CCccc
Q 010240 401 DKIIGVSCKTPEE----AHQAWIDGANYIGCGGVYPTNTKANNLTVGL-DGLKTVCLASKLPVVAIG-----G--IGISN 468 (514)
Q Consensus 401 ~~~ig~s~~~~~e----~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~-~~l~~~~~~~~~pv~a~G-----G--i~~~~ 468 (514)
..++|+++.+..| ++.|.+.|+|.+.+.|-+.- |+..+.-++ ++++.+.+..++||+.-= | ++++.
T Consensus 85 pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~--~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~ 162 (307)
T 3s5o_A 85 LLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYY--RGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDA 162 (307)
T ss_dssp EEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCTT--GGGCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHH
T ss_pred cEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcC--CCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcccCCCCCHHH
Confidence 4567777765444 66888999999988543321 111111233 778888888888987652 4 34566
Q ss_pred HHHHHH
Q 010240 469 ASDVMK 474 (514)
Q Consensus 469 ~~~~~~ 474 (514)
+.++.+
T Consensus 163 ~~~La~ 168 (307)
T 3s5o_A 163 VVTLSQ 168 (307)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 655553
No 479
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=73.68 E-value=17 Score=28.63 Aligned_cols=67 Identities=18% Similarity=0.271 Sum_probs=47.4
Q ss_pred ecCCHHHHHHhh-hCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEEECCCC-cccHHHHHHCCCCCCceE
Q 010240 407 SCKTPEEAHQAW-IDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVAIGGIG-ISNASDVMKIGVSNLKGV 483 (514)
Q Consensus 407 s~~~~~e~~~a~-~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gv 483 (514)
.+.+.+++.... +...|.|++.--.+. .-|++.++++++.. ++|++.+.+-. .+...++++.|++ ++
T Consensus 36 ~~~~~~~a~~~l~~~~~dlvi~d~~l~~-------~~g~~~~~~l~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~---~~ 105 (130)
T 3eod_A 36 LAADGVDALELLGGFTPDLMICDIAMPR-------MNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVE---DV 105 (130)
T ss_dssp EESCHHHHHHHHTTCCCSEEEECCC------------CHHHHHHHHHTTCCCCEEEEECCCCHHHHHHHHHHCCS---EE
T ss_pred EeCCHHHHHHHHhcCCCCEEEEecCCCC-------CCHHHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHcCCC---EE
Confidence 367888776655 455899988754442 23789999998765 78988887665 5667889999999 65
No 480
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=73.65 E-value=24 Score=28.25 Aligned_cols=87 Identities=20% Similarity=0.172 Sum_probs=61.5
Q ss_pred ecCCHHHHHHhh-hCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHc---CCCCEEEECCCC-cccHHHHHHCCCCCCc
Q 010240 407 SCKTPEEAHQAW-IDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLA---SKLPVVAIGGIG-ISNASDVMKIGVSNLK 481 (514)
Q Consensus 407 s~~~~~e~~~a~-~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~---~~~pv~a~GGi~-~~~~~~~~~~Ga~~~~ 481 (514)
.+.+.+|+.... +...|.|++.-..|. .-|++.++++++. .++||+.+.+-. .+....++++|++
T Consensus 33 ~~~~~~~al~~~~~~~~dlvl~D~~lp~-------~~g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~ga~--- 102 (136)
T 3t6k_A 33 RAASGEEALQQIYKNLPDALICDVLLPG-------IDGYTLCKRVRQHPLTKTLPILMLTAQGDISAKIAGFEAGAN--- 102 (136)
T ss_dssp EESSHHHHHHHHHHSCCSEEEEESCCSS-------SCHHHHHHHHHHSGGGTTCCEEEEECTTCHHHHHHHHHHTCS---
T ss_pred EeCCHHHHHHHHHhCCCCEEEEeCCCCC-------CCHHHHHHHHHcCCCcCCccEEEEecCCCHHHHHHHHhcCcc---
Confidence 567887766544 566899988654442 1378999998874 278988887765 5567789999999
Q ss_pred eEEEeecccCCCCHHHHHHHHHHHHHH
Q 010240 482 GVAVVSALFDRECILPESKKLHAVLMD 508 (514)
Q Consensus 482 gva~~~~i~~~~~~~~~~~~~~~~~~~ 508 (514)
++ +.+.-++.+....+++.+..
T Consensus 103 ~~-----l~KP~~~~~L~~~i~~~l~~ 124 (136)
T 3t6k_A 103 DY-----LAKPFEPQELVYRVKNILAR 124 (136)
T ss_dssp EE-----EETTCCHHHHHHHHHHHHHC
T ss_pred eE-----EeCCCCHHHHHHHHHHHHhc
Confidence 64 45666777777777776654
No 481
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=73.48 E-value=48 Score=32.43 Aligned_cols=44 Identities=25% Similarity=0.288 Sum_probs=38.9
Q ss_pred cCCHHHHHHHHHcCCCCEEEECCCCcccHHHHHHCCCCCCceEEEee
Q 010240 441 TVGLDGLKTVCLASKLPVVAIGGIGISNASDVMKIGVSNLKGVAVVS 487 (514)
Q Consensus 441 ~~g~~~l~~~~~~~~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~ 487 (514)
...|+.++++++..++||+.=|-.+++.+..+.++|++ +|.+..
T Consensus 215 ~~~~~~i~~lr~~~~~PvivK~v~~~e~a~~a~~~Gad---~I~vs~ 258 (368)
T 2nli_A 215 KISPRDIEEIAGHSGLPVFVKGIQHPEDADMAIKRGAS---GIWVSN 258 (368)
T ss_dssp BCCHHHHHHHHHHSSSCEEEEEECSHHHHHHHHHTTCS---EEEECC
T ss_pred hhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHcCCC---EEEEcC
Confidence 45788899999988999998887889999999999999 999854
No 482
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=73.40 E-value=49 Score=31.06 Aligned_cols=134 Identities=18% Similarity=0.242 Sum_probs=82.3
Q ss_pred HHHHHHHHHHhhcCceEEE----cCcHHHHHhCCCCeEEeCCCCCC-HHHHHhhcCCCcEEEEecC---CHHHHHHhh--
Q 010240 349 EAAKACLQICCVHGVPLLI----NDRIDIALACDADGVHLGQSDMP-ARTARALLGPDKIIGVSCK---TPEEAHQAW-- 418 (514)
Q Consensus 349 ~~~~~~~~~~~~~~~~l~v----~~~~~~a~~~ga~gvhl~~~~~~-~~~~~~~~~~~~~ig~s~~---~~~e~~~a~-- 418 (514)
+-.+.++++|+++|++++. ..+++.+.++ +|.+.++..+.. ...++..-+.++.++.+.. |++|+..|.
T Consensus 78 ~GL~~L~~~~~e~Glp~~Tev~d~~~v~~l~~~-vd~lqIgA~~~~n~~LLr~va~~gkPVilK~G~~~t~~ei~~ave~ 156 (285)
T 3sz8_A 78 EGLKIFAEVKARFGVPVITDVHEAEQAAPVAEI-ADVLQVPAFLARQTDLVVAIAKAGKPVNVKKPQFMSPTQLKHVVSK 156 (285)
T ss_dssp HHHHHHHHHHHHHCCCEEEECCSGGGHHHHHTT-CSEEEECGGGTTCHHHHHHHHHTSSCEEEECCTTSCGGGTHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh-CCEEEECccccCCHHHHHHHHccCCcEEEeCCCCCCHHHHHHHHHH
Confidence 4455677888899998875 2367777787 999999985432 2233333334555665553 777755443
Q ss_pred --hCCCcEEEe---ccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEEE---------------CCCC---cccHHHHHH
Q 010240 419 --IDGANYIGC---GGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVAI---------------GGIG---ISNASDVMK 474 (514)
Q Consensus 419 --~~g~d~v~~---~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a~---------------GGi~---~~~~~~~~~ 474 (514)
+.|.+-|.+ |.-|+. ......+..+..+++.+ ++||+.. ||-. +.-......
T Consensus 157 i~~~Gn~~i~L~erg~~y~~----~~~~vdl~~i~~lk~~~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA 232 (285)
T 3sz8_A 157 CGEVGNDRVMLCERGSSFGY----DNLVVDMLGFRQMAETTGGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIA 232 (285)
T ss_dssp HHHTTCCCEEEEECCEECSS----SCEECCTTHHHHHHHHTTSCCEEEETTTTCC---------------HHHHHHHHHH
T ss_pred HHHcCCCcEEEEeCCCCCCC----CcCccCHHHHHHHHHhCCCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHH
Confidence 557654544 333321 11225677788888888 4999773 2321 222456778
Q ss_pred CCCCCCceEEEeeccc
Q 010240 475 IGVSNLKGVAVVSALF 490 (514)
Q Consensus 475 ~Ga~~~~gva~~~~i~ 490 (514)
+||+ |+.+=.-+.
T Consensus 233 ~GA~---gl~IE~H~~ 245 (285)
T 3sz8_A 233 VGIA---GLFLEAHPD 245 (285)
T ss_dssp HCCS---EEEEEEESC
T ss_pred hCCC---EEEEEeccC
Confidence 8999 998877665
No 483
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=73.31 E-value=3.2 Score=40.76 Aligned_cols=68 Identities=12% Similarity=-0.022 Sum_probs=48.7
Q ss_pred CHHHHHHhhhCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEEECCCCcccHHHHHHCCCCCCceEEEe
Q 010240 410 TPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVAIGGIGISNASDVMKIGVSNLKGVAVV 486 (514)
Q Consensus 410 ~~~e~~~a~~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~ 486 (514)
+.+.+..+.+.|+|+|.+-.-. +.+..-++.++++++.. ++||++=+-.+++.+..+.++|++ +|.++
T Consensus 101 ~~e~~~~a~~aGvdvI~id~a~------G~~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD---~I~Vg 169 (361)
T 3r2g_A 101 ELQRAEALRDAGADFFCVDVAH------AHAKYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGAD---IIKAG 169 (361)
T ss_dssp HHHHHHHHHHTTCCEEEEECSC------CSSHHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCS---EEEEC
T ss_pred HHHHHHHHHHcCCCEEEEeCCC------CCcHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCC---EEEEc
Confidence 3566888889999999762111 11111257888888875 788887334578999999999999 99884
No 484
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=73.08 E-value=24 Score=31.78 Aligned_cols=81 Identities=16% Similarity=0.155 Sum_probs=52.1
Q ss_pred HHHHHHhhhCCCcEEEec----cccCCCCCCCCccCCHHHHHHHHHcCCCCEE--EECCCCc-ccHHHHHHCCCCCCceE
Q 010240 411 PEEAHQAWIDGANYIGCG----GVYPTNTKANNLTVGLDGLKTVCLASKLPVV--AIGGIGI-SNASDVMKIGVSNLKGV 483 (514)
Q Consensus 411 ~~e~~~a~~~g~d~v~~~----~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~--a~GGi~~-~~~~~~~~~Ga~~~~gv 483 (514)
.+++..+.+.|+|++-+. +++|. ...|++.++++++.++.|+. ..- -++ +.+..+.++|++ +|
T Consensus 22 ~~~i~~~~~~Gad~i~l~i~Dg~fv~~------~~~~~~~~~~lr~~~~~~~~v~lmv-~d~~~~i~~~~~agad---~v 91 (228)
T 1h1y_A 22 AAEADRMVRLGADWLHMDIMDGHFVPN------LTIGAPVIQSLRKHTKAYLDCHLMV-TNPSDYVEPLAKAGAS---GF 91 (228)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSC------BCBCHHHHHHHHTTCCSEEEEEEES-SCGGGGHHHHHHHTCS---EE
T ss_pred HHHHHHHHHcCCCEEEEEEecCCcCcc------hhhCHHHHHHHHhhcCCcEEEEEEe-cCHHHHHHHHHHcCCC---EE
Confidence 456778889999998663 44441 24688999999887654433 222 232 348889999999 99
Q ss_pred EEeecccCCCCH-HHHHHHHH
Q 010240 484 AVVSALFDRECI-LPESKKLH 503 (514)
Q Consensus 484 a~~~~i~~~~~~-~~~~~~~~ 503 (514)
.+-..- .+++ .+.+++++
T Consensus 92 ~vH~~~--~~~~~~~~~~~i~ 110 (228)
T 1h1y_A 92 TFHIEV--SRDNWQELIQSIK 110 (228)
T ss_dssp EEEGGG--CTTTHHHHHHHHH
T ss_pred EECCCC--cccHHHHHHHHHH
Confidence 776432 2345 55555554
No 485
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=73.05 E-value=26 Score=34.53 Aligned_cols=56 Identities=18% Similarity=0.109 Sum_probs=38.0
Q ss_pred HhCCCCeEEeCCCC-----CC--HHHHHhhcCCCcEEEEecCCHHHHHHhhhCC-CcEEEecccc
Q 010240 375 LACDADGVHLGQSD-----MP--ARTARALLGPDKIIGVSCKTPEEAHQAWIDG-ANYIGCGGVY 431 (514)
Q Consensus 375 ~~~ga~gvhl~~~~-----~~--~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g-~d~v~~~~vf 431 (514)
.+.|++++|+.... .+ ...+++..... +++..--|++++.++.+.| +|+|.+|--|
T Consensus 276 ~~~Gvd~i~v~~~~~~~~~~~~~~~~ir~~~~iP-vi~~G~it~~~a~~~l~~g~aD~V~igR~~ 339 (379)
T 3aty_A 276 EPLSLAYLHYLRGDMVNQQIGDVVAWVRGSYSGV-KISNLRYDFEEADQQIREGKVDAVAFGAKF 339 (379)
T ss_dssp GGGCCSEEEEECSCTTSCCCCCHHHHHHTTCCSC-EEEESSCCHHHHHHHHHTTSCSEEEESHHH
T ss_pred HHhCCCEEEEcCCCcCCCCccHHHHHHHHHCCCc-EEEECCCCHHHHHHHHHcCCCeEEEecHHH
Confidence 46799999997632 11 33455555433 4444434999999999988 9999998544
No 486
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=73.03 E-value=36 Score=27.61 Aligned_cols=87 Identities=14% Similarity=0.067 Sum_probs=59.5
Q ss_pred EecCCHHHHHHhhh--------CCCcEEEeccccCCCCCCCCccCCHHHHHHHHHc---CCCCEEEECCCC-cccHHHHH
Q 010240 406 VSCKTPEEAHQAWI--------DGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLA---SKLPVVAIGGIG-ISNASDVM 473 (514)
Q Consensus 406 ~s~~~~~e~~~a~~--------~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~---~~~pv~a~GGi~-~~~~~~~~ 473 (514)
..+.+.+++....+ ...|.+++---.|. . -|++.++++++. .++||+.+.+-. .+.+..++
T Consensus 38 ~~~~~~~~al~~l~~~~~~~~~~~~dlillD~~lp~-----~--~g~~l~~~l~~~~~~~~~piiils~~~~~~~~~~~~ 110 (149)
T 1i3c_A 38 IILRDGLAAMAFLQQQGEYENSPRPNLILLDLNLPK-----K--DGREVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASY 110 (149)
T ss_dssp EEECSHHHHHHHHTTCGGGTTCCCCSEEEECSCCSS-----S--CHHHHHHHHHHCTTTTTSCEEEEESCCCHHHHHHHH
T ss_pred EEeCCHHHHHHHHHhccccccCCCCCEEEEeCCCCC-----C--cHHHHHHHHHhCcCcCCCeEEEEECCCChHHHHHHH
Confidence 35677788776654 35899988654442 1 378889999875 268988887764 56778899
Q ss_pred HCCCCCCceEEEeecccCCCCHHHHHHHHHHHHH
Q 010240 474 KIGVSNLKGVAVVSALFDRECILPESKKLHAVLM 507 (514)
Q Consensus 474 ~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~~~ 507 (514)
+.|++ ++ +...-++.+....++...+
T Consensus 111 ~~ga~---~~-----l~KP~~~~~L~~~i~~~~~ 136 (149)
T 1i3c_A 111 ELHVN---CY-----LTKSRNLKDLFKMVQGIES 136 (149)
T ss_dssp HTTCS---EE-----EECCSSHHHHHHHHHHHHH
T ss_pred HcCCc---EE-----EECCCCHHHHHHHHHHHHH
Confidence 99999 65 4455566666666655544
No 487
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=72.89 E-value=32 Score=27.20 Aligned_cols=88 Identities=11% Similarity=0.043 Sum_probs=60.0
Q ss_pred EEecCCHHHHHHhh-hCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEEECCCC-cccHHHHHHCCCCCCc
Q 010240 405 GVSCKTPEEAHQAW-IDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVAIGGIG-ISNASDVMKIGVSNLK 481 (514)
Q Consensus 405 g~s~~~~~e~~~a~-~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a~GGi~-~~~~~~~~~~Ga~~~~ 481 (514)
-..+.+..++.... +...|.+++.--.|. .-|++.++++++.. ++||+.+.+-. .+.+..+++.|++
T Consensus 32 v~~~~~~~~al~~~~~~~~dlvilD~~lp~-------~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~--- 101 (133)
T 3b2n_A 32 LADTDNGLDAMKLIEEYNPNVVILDIEMPG-------MTGLEVLAEIRKKHLNIKVIIVTTFKRPGYFEKAVVNDVD--- 101 (133)
T ss_dssp EEEESCHHHHHHHHHHHCCSEEEECSSCSS-------SCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCS---
T ss_pred EEEcCCHHHHHHHHhhcCCCEEEEecCCCC-------CCHHHHHHHHHHHCCCCcEEEEecCCCHHHHHHHHHcCCc---
Confidence 34566777765543 446899988765542 13788899998754 78999887765 5667889999999
Q ss_pred eEEEeecccCCCCHHHHHHHHHHHHH
Q 010240 482 GVAVVSALFDRECILPESKKLHAVLM 507 (514)
Q Consensus 482 gva~~~~i~~~~~~~~~~~~~~~~~~ 507 (514)
++ +.+.-++.+....++..++
T Consensus 102 ~~-----l~Kp~~~~~L~~~i~~~~~ 122 (133)
T 3b2n_A 102 AY-----VLKERSIEELVETINKVNN 122 (133)
T ss_dssp EE-----EETTSCHHHHHHHHHHHHC
T ss_pred EE-----EECCCCHHHHHHHHHHHHc
Confidence 65 3455566666666665543
No 488
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=72.80 E-value=39 Score=31.94 Aligned_cols=157 Identities=15% Similarity=0.089 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhcCceEEE----cCcHHHHHhCCCCeEEeCCCC-CCHHHHHhhcCCCcEEEEecC---CHHHHHHhh
Q 010240 347 FLEAAKACLQICCVHGVPLLI----NDRIDIALACDADGVHLGQSD-MPARTARALLGPDKIIGVSCK---TPEEAHQAW 418 (514)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~l~v----~~~~~~a~~~ga~gvhl~~~~-~~~~~~~~~~~~~~~ig~s~~---~~~e~~~a~ 418 (514)
+.+-.+.+.++|+++|++++. ..+++.+.++ +|.+-++..+ .....++..-+.++.++.+.. |++|+..|.
T Consensus 97 ~~~GL~~L~~~~~e~GLpv~Tev~D~~~v~~l~~~-vd~lkIgA~~~~n~~LLr~va~~gkPVilK~Gms~t~~ei~~av 175 (298)
T 3fs2_A 97 LEKALEVFSDLKKEYGFPVLTDIHTEEQCAAVAPV-VDVLQIPAFLCRQTDLLIAAARTGRVVNVKKGQFLAPWDMKNVL 175 (298)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEECCSHHHHHHHTTT-CSEEEECGGGTTCHHHHHHHHHTTSEEEEECCTTCCGGGHHHHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhh-CCEEEECccccCCHHHHHHHHccCCcEEEeCCCCCCHHHHHHHH
Q ss_pred ----hCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcCCCCEEEE---------------CCCC---cccHHHHHHCC
Q 010240 419 ----IDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAI---------------GGIG---ISNASDVMKIG 476 (514)
Q Consensus 419 ----~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~a~---------------GGi~---~~~~~~~~~~G 476 (514)
+.|-+-|.+..---+. ........+..+..+++ +++||+.. ||.. +.-......+|
T Consensus 176 e~i~~~Gn~~iiL~erg~~y-~~~~~~vdl~~i~~lk~-~~~PV~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAlG 253 (298)
T 3fs2_A 176 AKITESGNPNVLATERGVSF-GYNTLVSDMRALPIMAG-LGAPVIFDATHSVQQPGGQGGSTGGQREFVETLARAAVAVG 253 (298)
T ss_dssp HHHHTTTCCCEEEEECCEEC-SSSCEECCTTHHHHHHT-TTSCEEEEHHHHTCCCC--------CGGGHHHHHHHHHHHC
T ss_pred HHHHHcCCCeEEEEECCCCC-CCCCCccCHHHHHHHHH-cCCcEEEcCCCccccCCcccCCCCCchhhHHHHHHHHHHcC
Q ss_pred CCCCceEEEeeccc------------CCCCHHHHHHHHHHHHHHH
Q 010240 477 VSNLKGVAVVSALF------------DRECILPESKKLHAVLMDA 509 (514)
Q Consensus 477 a~~~~gva~~~~i~------------~~~~~~~~~~~~~~~~~~~ 509 (514)
|+ |+.+-.-+. ..++..+.++.++++....
T Consensus 254 Ad---Gl~IE~H~tpd~al~D~~~sl~p~el~~lv~~ir~i~~a~ 295 (298)
T 3fs2_A 254 VA---GFFIETHEDPDNAPSDGPNMVPIDKMPALLEKLMAFDRIA 295 (298)
T ss_dssp CS---EEEEEEESSGGGCSSSGGGCEEGGGHHHHHHHHHHHHHHH
T ss_pred CC---EEEEEecCChhccCCchhhcCCHHHHHHHHHHHHHHHHHH
No 489
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=72.77 E-value=15 Score=36.11 Aligned_cols=56 Identities=16% Similarity=0.192 Sum_probs=37.5
Q ss_pred HhCCCCeEEeCCCC-----------CCHHHHHhhcCCCcEEEEecCCHHHHHHhhhCC-CcEEEecccc
Q 010240 375 LACDADGVHLGQSD-----------MPARTARALLGPDKIIGVSCKTPEEAHQAWIDG-ANYIGCGGVY 431 (514)
Q Consensus 375 ~~~ga~gvhl~~~~-----------~~~~~~~~~~~~~~~ig~s~~~~~e~~~a~~~g-~d~v~~~~vf 431 (514)
.+.|++++|+.... .....+++..... +++..--+++++.++.+.| +|+|.+|--+
T Consensus 266 e~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~iP-vi~~G~i~~~~a~~~l~~g~aD~V~~gR~~ 333 (376)
T 1icp_A 266 NKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGT-FIVAGGYDREDGNRALIEDRADLVAYGRLF 333 (376)
T ss_dssp GGGCCSEEEEECCSCCC------CCCCSHHHHHHCCSC-EEEESSCCHHHHHHHHHTTSCSEEEESHHH
T ss_pred HHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcCCC-EEEeCCCCHHHHHHHHHCCCCcEEeecHHH
Confidence 46799999985431 1123455555433 4444344899999999888 9999998544
No 490
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=72.70 E-value=42 Score=30.52 Aligned_cols=181 Identities=17% Similarity=0.180 Sum_probs=110.3
Q ss_pred CHHHHHHHHHhCCCCEE--EEEcCC--CCHHHHHHHHHHHHHHHhhcCceEEE-----cCcHHHHHhCCCCeEEeCCCC-
Q 010240 319 SITDAVKAALEGGATII--QLREKD--ADTRGFLEAAKACLQICCVHGVPLLI-----NDRIDIALACDADGVHLGQSD- 388 (514)
Q Consensus 319 ~~~~~~~~~~~~Gv~~v--~lr~~~--~~~~~~~~~~~~~~~~~~~~~~~l~v-----~~~~~~a~~~ga~gvhl~~~~- 388 (514)
+..+....+.++|++.| ++|+.. ..+.+... +++.+ +.++-+ .+-+++|.+...+.+-|-...
T Consensus 26 dpv~aA~~ae~aGAdgITvHlReDrRHI~d~Dv~~----L~~~~---~~~lNlE~a~t~emi~ia~~~kP~~vtLVPE~r 98 (243)
T 1m5w_A 26 DPVQAAFIAEQAGADGITVHLREDRRHITDRDVRI----LRQTL---DTRMNLEMAVTEEMLAIAVETKPHFCCLVPEKR 98 (243)
T ss_dssp CHHHHHHHHHTTTCSEEEEECCTTCSSSCHHHHHH----HHHHC---SSEEEEEECSSHHHHHHHHHHCCSEEEECCCCS
T ss_pred CHHHHHHHHHHcCCCEEEeCCCCCcccCCHHHHHH----HHHhc---CCCEEeccCCCHHHHHHHHHcCCCEEEECCCCC
Confidence 45566677788998765 556643 34444333 33332 344433 235678889888888774432
Q ss_pred --------CC--------HHHHHhhcCCCcEEEEecC-CHHHHHHhhhCCCcEEEe--ccccCCCCCCCCccCCHHHHHH
Q 010240 389 --------MP--------ARTARALLGPDKIIGVSCK-TPEEAHQAWIDGANYIGC--GGVYPTNTKANNLTVGLDGLKT 449 (514)
Q Consensus 389 --------~~--------~~~~~~~~~~~~~ig~s~~-~~~e~~~a~~~g~d~v~~--~~vf~t~~k~~~~~~g~~~l~~ 449 (514)
++ ...+.++...+..+++... +++++..|.+.|+|+|=+ |++-...+ +.....-++.+..
T Consensus 99 ~e~TTegGldv~~~~~~l~~~i~~L~~~GIrVSLFIDpd~~qi~aA~~~GA~~IELhTG~Ya~a~~-~~~~~~el~~i~~ 177 (243)
T 1m5w_A 99 QEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTGCYADAKT-DAEQAQELARIAK 177 (243)
T ss_dssp SCSSCCSCCCSGGGHHHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHTTCSEEEEECHHHHHCCS-HHHHHHHHHHHHH
T ss_pred CCcCCCcchhHHhhHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCcCEEEEechhhhcCCC-chhHHHHHHHHHH
Confidence 11 1223445556888877776 899999999999999966 33222110 0000012233333
Q ss_pred HHH---cCCCCEEEECCCCcccHHHHHHCCCCCCceEEEeecccCC---CCHHHHHHHHHHHHHHH
Q 010240 450 VCL---ASKLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSALFDR---ECILPESKKLHAVLMDA 509 (514)
Q Consensus 450 ~~~---~~~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~~i~~~---~~~~~~~~~~~~~~~~~ 509 (514)
..+ ..++-|-|--|++.+|+..+.+. -.|.-+-+|-+|... --..++++++++.++..
T Consensus 178 aa~~A~~lGL~VnAGHgL~y~Nv~~ia~i--p~i~ElnIGHaiia~Al~~Gl~~aV~~m~~~~~~~ 241 (243)
T 1m5w_A 178 AATFAASLGLKVNAGHGLTYHNVKAIAAI--PEMHELNIGHAIIGRAVMTGLKDAVAEMKRLMLEA 241 (243)
T ss_dssp HHHHHHHTTCEEEEESSCCTTTHHHHHTC--TTEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEecCCCCCHHHHHHHhhC--CCCeEEccCHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 322 35899999999999999998643 233477777777632 24567788888887543
No 491
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=72.70 E-value=26 Score=28.57 Aligned_cols=84 Identities=14% Similarity=0.095 Sum_probs=57.0
Q ss_pred ecCCHHHHHHhh----------hCCCcEEEeccccCCCCCCCCccCCHHHHHHHHH--cC-CCCEEEECCCC-cccHHHH
Q 010240 407 SCKTPEEAHQAW----------IDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCL--AS-KLPVVAIGGIG-ISNASDV 472 (514)
Q Consensus 407 s~~~~~e~~~a~----------~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~--~~-~~pv~a~GGi~-~~~~~~~ 472 (514)
.+.+.+++.... ....|.|++.--.|. .-|++.++++++ .. ++||+.+.+-. .+.+..+
T Consensus 35 ~~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~-------~~g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~ 107 (152)
T 3heb_A 35 AFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPD-------MTGIDILKLVKENPHTRRSPVVILTTTDDQREIQRC 107 (152)
T ss_dssp EESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSS-------SBHHHHHHHHHHSTTTTTSCEEEEESCCCHHHHHHH
T ss_pred EeCCHHHHHHHHhccccccccccCCCCEEEEeCCCCC-------CcHHHHHHHHHhcccccCCCEEEEecCCCHHHHHHH
Confidence 367788877765 356899988754442 237899999987 33 78988877665 5667789
Q ss_pred HHCCCCCCceEEEeecccCCCCHHHHHHHHHHH
Q 010240 473 MKIGVSNLKGVAVVSALFDRECILPESKKLHAV 505 (514)
Q Consensus 473 ~~~Ga~~~~gva~~~~i~~~~~~~~~~~~~~~~ 505 (514)
++.|++ ++ +.+.-++.+....+.+.
T Consensus 108 ~~~g~~---~~-----l~KP~~~~~l~~~i~~~ 132 (152)
T 3heb_A 108 YDLGAN---VY-----ITKPVNYENFANAIRQL 132 (152)
T ss_dssp HHTTCS---EE-----EECCSSHHHHHHHHHHH
T ss_pred HHCCCc---EE-----EeCCCCHHHHHHHHHHH
Confidence 999999 65 33444555554444444
No 492
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=72.52 E-value=16 Score=32.90 Aligned_cols=104 Identities=13% Similarity=0.131 Sum_probs=63.4
Q ss_pred HHHHHhCCCCEEEEEcC--CCCHHHHHHHHHHHHHHHhhcCceEE--EcCcHH--HHHhCCCCeEEeCCCCC--------
Q 010240 324 VKAALEGGATIIQLREK--DADTRGFLEAAKACLQICCVHGVPLL--INDRID--IALACDADGVHLGQSDM-------- 389 (514)
Q Consensus 324 ~~~~~~~Gv~~v~lr~~--~~~~~~~~~~~~~~~~~~~~~~~~l~--v~~~~~--~a~~~ga~gvhl~~~~~-------- 389 (514)
++.+.+.|++.+.+-.. .....+. +++.+.++++|..++ +++..+ .+.+.+++.+-......
T Consensus 75 ~~~~~~~Gad~Vll~~ser~l~~~e~----~~~~~~a~~~Gl~~iv~v~~~~e~~~~~~~~~~~i~~~~~~~iGtG~~~~ 150 (219)
T 2h6r_A 75 AEAIKDCGCKGTLINHSEKRMLLADI----EAVINKCKNLGLETIVCTNNINTSKAVAALSPDCIAVEPPELIGTGIPVS 150 (219)
T ss_dssp HHHHHHHTCCEEEESBTTBCCBHHHH----HHHHHHHHHHTCEEEEEESSSHHHHHHTTTCCSEEEECCCC---------
T ss_pred HHHHHHcCCCEEEECCccccCCHHHH----HHHHHHHHHCCCeEEEEeCCchHHHHHHhCCCCEEEEEeccccccCCCCc
Confidence 45677889999999443 2444443 344455667777554 444433 34556666664433221
Q ss_pred ------CH---HHHHhhc-CCCcEEEEecCCHHHHHHhhhCCCcEEEecccc
Q 010240 390 ------PA---RTARALL-GPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVY 431 (514)
Q Consensus 390 ------~~---~~~~~~~-~~~~~ig~s~~~~~e~~~a~~~g~d~v~~~~vf 431 (514)
.. ..+|... ....+.|-++++++.+..+.+.|+|-+++|..+
T Consensus 151 t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGsAi 202 (219)
T 2h6r_A 151 KANPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAALDLGAEGVLLASGV 202 (219)
T ss_dssp -----CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTTCCCEEESHHH
T ss_pred cCCHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCCCCEEEEcHHH
Confidence 01 1233322 234566778889999999999999999998644
No 493
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=72.49 E-value=26 Score=28.63 Aligned_cols=88 Identities=15% Similarity=0.071 Sum_probs=57.3
Q ss_pred EEecCCHHHHHHhhh--CCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEEECCCC-cccHHHHHHCCCCCC
Q 010240 405 GVSCKTPEEAHQAWI--DGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVAIGGIG-ISNASDVMKIGVSNL 480 (514)
Q Consensus 405 g~s~~~~~e~~~a~~--~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a~GGi~-~~~~~~~~~~Ga~~~ 480 (514)
-..+.+.+++..... ...|.+++.--.+. .-|++.++++++.. ++||+.+.+-. .+.+..+++.|++
T Consensus 32 v~~~~~~~~a~~~l~~~~~~dlvi~d~~l~~-------~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~-- 102 (154)
T 2qsj_A 32 VEGAETVSDALAFLEADNTVDLILLDVNLPD-------AEAIDGLVRLKRFDPSNAVALISGETDHELIRAALEAGAD-- 102 (154)
T ss_dssp EEEESSHHHHHHHHHTTCCCSEEEECC-------------CHHHHHHHHHHCTTSEEEEC-----CHHHHHHHHTTCC--
T ss_pred EEEecCHHHHHHHHhccCCCCEEEEeCCCCC-------CchHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHccCC--
Confidence 345778888777664 45899988754431 23788999998765 78999988765 5667889999999
Q ss_pred ceEEEeecccCCCCHHHHHHHHHHHHH
Q 010240 481 KGVAVVSALFDRECILPESKKLHAVLM 507 (514)
Q Consensus 481 ~gva~~~~i~~~~~~~~~~~~~~~~~~ 507 (514)
++ +...-++.+....+...++
T Consensus 103 -~~-----l~kp~~~~~L~~~l~~~~~ 123 (154)
T 2qsj_A 103 -GF-----IPKSADPQVLIHAVSLILE 123 (154)
T ss_dssp -BB-----CCTTSCHHHHHHHHHHHHT
T ss_pred -EE-----EeCCCCHHHHHHHHHHHHc
Confidence 54 4455566666666666554
No 494
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=72.18 E-value=42 Score=32.85 Aligned_cols=43 Identities=19% Similarity=0.315 Sum_probs=37.2
Q ss_pred CCHHHHHHHHHcCCCCEEEECCCCcccHHHHHHCCCCCCceEEEee
Q 010240 442 VGLDGLKTVCLASKLPVVAIGGIGISNASDVMKIGVSNLKGVAVVS 487 (514)
Q Consensus 442 ~g~~~l~~~~~~~~~pv~a~GGi~~~~~~~~~~~Ga~~~~gva~~~ 487 (514)
..++.++++++..++||+.=|-.+++.+..+.++|++ +|.++.
T Consensus 212 ~~~~~i~~l~~~~~~pv~vK~~~~~e~a~~a~~~Gad---~I~vs~ 254 (370)
T 1gox_A 212 LSWKDVAWLQTITSLPILVKGVITAEDARLAVQHGAA---GIIVSN 254 (370)
T ss_dssp CCHHHHHHHHHHCCSCEEEECCCSHHHHHHHHHTTCS---EEEECC
T ss_pred chHHHHHHHHHHhCCCEEEEecCCHHHHHHHHHcCCC---EEEECC
Confidence 4678899999988999997666789999999999999 999854
No 495
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=72.15 E-value=25 Score=27.47 Aligned_cols=85 Identities=14% Similarity=0.072 Sum_probs=57.9
Q ss_pred ecCCHHHHHHhh-hCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEEECCCC-cccHHHHHHCCCCCCceE
Q 010240 407 SCKTPEEAHQAW-IDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVAIGGIG-ISNASDVMKIGVSNLKGV 483 (514)
Q Consensus 407 s~~~~~e~~~a~-~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gv 483 (514)
.+.+.+++.... ....|.+++.--.|. . -|++.++++++.. ++|++.+.+-. .+....+++.|++ ++
T Consensus 32 ~~~~~~~~~~~~~~~~~dlvi~D~~l~~-----~--~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~---~~ 101 (126)
T 1dbw_A 32 MHQSAEAFLAFAPDVRNGVLVTDLRMPD-----M--SGVELLRNLGDLKINIPSIVITGHGDVPMAVEAMKAGAV---DF 101 (126)
T ss_dssp EESCHHHHHHHGGGCCSEEEEEECCSTT-----S--CHHHHHHHHHHTTCCCCEEEEECTTCHHHHHHHHHTTCS---EE
T ss_pred EeCCHHHHHHHHhcCCCCEEEEECCCCC-----C--CHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHhCHH---Hh
Confidence 467777766544 456899887654431 1 3788888888754 78988887764 5677889999999 65
Q ss_pred EEeecccCCCCHHHHHHHHHHHH
Q 010240 484 AVVSALFDRECILPESKKLHAVL 506 (514)
Q Consensus 484 a~~~~i~~~~~~~~~~~~~~~~~ 506 (514)
+...-++.+....++..+
T Consensus 102 -----l~Kp~~~~~l~~~i~~~~ 119 (126)
T 1dbw_A 102 -----IEKPFEDTVIIEAIERAS 119 (126)
T ss_dssp -----EESSCCHHHHHHHHHHHH
T ss_pred -----eeCCCCHHHHHHHHHHHH
Confidence 445556666666555554
No 496
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=72.14 E-value=28 Score=28.45 Aligned_cols=86 Identities=17% Similarity=0.134 Sum_probs=58.5
Q ss_pred ecCCHHHHHHhh-hCCCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEEECCCC-cccHHHHHHCCCCCCceE
Q 010240 407 SCKTPEEAHQAW-IDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVAIGGIG-ISNASDVMKIGVSNLKGV 483 (514)
Q Consensus 407 s~~~~~e~~~a~-~~g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a~GGi~-~~~~~~~~~~Ga~~~~gv 483 (514)
.+.+.+++.... ....|.+++.--.+. .-|++.++.+++.. .+||+.+.+-. .+....+++.|++ ++
T Consensus 32 ~~~~~~~a~~~l~~~~~dliild~~l~~-------~~g~~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~~g~~---~~ 101 (155)
T 1qkk_A 32 SFASATEALAGLSADFAGIVISDIRMPG-------MDGLALFRKILALDPDLPMILVTGHGDIPMAVQAIQDGAY---DF 101 (155)
T ss_dssp EESCHHHHHHTCCTTCCSEEEEESCCSS-------SCHHHHHHHHHHHCTTSCEEEEECGGGHHHHHHHHHTTCC---EE
T ss_pred EECCHHHHHHHHHhCCCCEEEEeCCCCC-------CCHHHHHHHHHhhCCCCCEEEEECCCChHHHHHHHhcCCC---eE
Confidence 577888877655 345899988754431 13688888888765 79999887765 5667889999999 65
Q ss_pred EEeecccCCCCHHHHHHHHHHHHH
Q 010240 484 AVVSALFDRECILPESKKLHAVLM 507 (514)
Q Consensus 484 a~~~~i~~~~~~~~~~~~~~~~~~ 507 (514)
+...-++.+....+...+.
T Consensus 102 -----l~kP~~~~~L~~~i~~~~~ 120 (155)
T 1qkk_A 102 -----IAKPFAADRLVQSARRAEE 120 (155)
T ss_dssp -----EESSCCHHHHHHHHHHHHH
T ss_pred -----EeCCCCHHHHHHHHHHHHH
Confidence 3344455555555555443
No 497
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=72.05 E-value=33 Score=31.02 Aligned_cols=83 Identities=18% Similarity=0.159 Sum_probs=53.7
Q ss_pred HHHHHHhhhCCCcEEEe----ccccCCCCCCCCccCCHHHHHHHHHcCCCCEE--EECCCCcc-cHHHHHHCCCCCCceE
Q 010240 411 PEEAHQAWIDGANYIGC----GGVYPTNTKANNLTVGLDGLKTVCLASKLPVV--AIGGIGIS-NASDVMKIGVSNLKGV 483 (514)
Q Consensus 411 ~~e~~~a~~~g~d~v~~----~~vf~t~~k~~~~~~g~~~l~~~~~~~~~pv~--a~GGi~~~-~~~~~~~~Ga~~~~gv 483 (514)
.+++..+.+.|+|++=+ |++.| .-..|++.++++++.++.|+. -.. -+++ -+..+.++||+ ||
T Consensus 20 ~~~i~~~~~~Gad~ihldi~DG~fvp------~~~~g~~~v~~lr~~~~~~~~vhlmv-~dp~~~i~~~~~aGad---gv 89 (230)
T 1tqj_A 20 GEEIKAVDEAGADWIHVDVMDGRFVP------NITIGPLIVDAIRPLTKKTLDVHLMI-VEPEKYVEDFAKAGAD---II 89 (230)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSS------CBCBCHHHHHHHGGGCCSEEEEEEES-SSGGGTHHHHHHHTCS---EE
T ss_pred HHHHHHHHHcCCCEEEEEEEecCCCc------chhhhHHHHHHHHhhcCCcEEEEEEc-cCHHHHHHHHHHcCCC---EE
Confidence 45677788899999744 34333 123588999999887766654 333 3443 47889999999 99
Q ss_pred EEeecccCCCCHHHHHHHHH
Q 010240 484 AVVSALFDRECILPESKKLH 503 (514)
Q Consensus 484 a~~~~i~~~~~~~~~~~~~~ 503 (514)
-+.-.=...+.+.+.++.++
T Consensus 90 ~vh~e~~~~~~~~~~~~~i~ 109 (230)
T 1tqj_A 90 SVHVEHNASPHLHRTLCQIR 109 (230)
T ss_dssp EEECSTTTCTTHHHHHHHHH
T ss_pred EECcccccchhHHHHHHHHH
Confidence 88743002245665555554
No 498
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=71.80 E-value=12 Score=34.85 Aligned_cols=106 Identities=16% Similarity=0.073 Sum_probs=59.6
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCC----HHHHHHHHHHHHHHHhhcCceEEEcC---------------cH---HHHH
Q 010240 318 RSITDAVKAALEGGATIIQLREKDAD----TRGFLEAAKACLQICCVHGVPLLIND---------------RI---DIAL 375 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~----~~~~~~~~~~~~~~~~~~~~~l~v~~---------------~~---~~a~ 375 (514)
+++.+.++++...|+++|++|..-+. .+++.+.+..++... .+.++++.- +. ..+.
T Consensus 32 ~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~--~~lPiI~T~Rt~~EGG~~~~~~~~~~~ll~~~~ 109 (258)
T 4h3d_A 32 KDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYI--HDIPLLFTFRSVVEGGEKLISRDYYTTLNKEIS 109 (258)
T ss_dssp HHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHC--TTSCEEEECCCGGGTCSCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhc--CCCCEEEEEechhhCCCCCCCHHHHHHHHHHHH
Confidence 45666777788899999999997553 333444444443322 145666511 11 2334
Q ss_pred hCC-CCeEEeCCCCCC--HHH-HHhhcCCCcEEEEecCC----H--HH----HHHhhhCCCcEE
Q 010240 376 ACD-ADGVHLGQSDMP--ART-ARALLGPDKIIGVSCKT----P--EE----AHQAWIDGANYI 425 (514)
Q Consensus 376 ~~g-a~gvhl~~~~~~--~~~-~~~~~~~~~~ig~s~~~----~--~e----~~~a~~~g~d~v 425 (514)
+.+ +|.+-+.-.... ... .......+..+..|.|+ | +| +.++.+.|+|++
T Consensus 110 ~~~~~d~iDvEl~~~~~~~~~l~~~a~~~~~kiI~S~Hdf~~TP~~~el~~~~~~~~~~gaDIv 173 (258)
T 4h3d_A 110 NTGLVDLIDVELFMGDEVIDEVVNFAHKKEVKVIISNHDFNKTPKKEEIVSRLCRMQELGADLP 173 (258)
T ss_dssp HTTCCSEEEEEGGGCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEE
T ss_pred hcCCchhhHHhhhccHHHHHHHHHHHHhCCCEEEEEEecCCCCCCHHHHHHHHHHHHHhCCCEE
Confidence 444 777766432211 111 11112346677788883 3 34 456778999998
No 499
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=71.58 E-value=15 Score=34.29 Aligned_cols=116 Identities=11% Similarity=0.013 Sum_probs=69.9
Q ss_pred CCHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHHHhhcCceEEEcCc-H---HHHHhC--CCCeEE-eCCCC--
Q 010240 318 RSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLINDR-I---DIALAC--DADGVH-LGQSD-- 388 (514)
Q Consensus 318 ~~~~~~~~~~~~~Gv~~v~lr~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~-~---~~a~~~--ga~gvh-l~~~~-- 388 (514)
+...+.+++.++.|+++|-+--.+...++..+...-+..+....++++.|..+ + +.|.++ |++-+- +....
T Consensus 34 ~~a~~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~~pisIDT~~~~v~~aal~a~~Ga~iINdvs~~~d~ 113 (271)
T 2yci_X 34 RPIQEWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVDLPCCLDSTNPDAIEAGLKVHRGHAMINSTSADQWK 113 (271)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCCCCEEEECSCHHHHHHHHHHCCSCCEEEEECSCHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHhCCCCCEEEECCCCccc
Confidence 56778888899999999999887766667666666666666667899988652 3 355667 887765 33221
Q ss_pred -CCHHHHHhhcCCCcEEEEec-----CCHHH--------HHHhhhCCCcE--EEeccccCC
Q 010240 389 -MPARTARALLGPDKIIGVSC-----KTPEE--------AHQAWIDGANY--IGCGGVYPT 433 (514)
Q Consensus 389 -~~~~~~~~~~~~~~~ig~s~-----~~~~e--------~~~a~~~g~d~--v~~~~vf~t 433 (514)
......-..++...++...- .|.+| +..+.+.|.+- |.+=|.+-.
T Consensus 114 ~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilDPg~gf 174 (271)
T 2yci_X 114 MDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADAHGIPMTELYIDPLILP 174 (271)
T ss_dssp HHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHTTCCGGGEEEECCCCC
T ss_pred cHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEecCCCc
Confidence 11112222334433433220 13222 34567889873 666666543
No 500
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=71.19 E-value=17 Score=30.14 Aligned_cols=84 Identities=14% Similarity=0.149 Sum_probs=57.1
Q ss_pred ecCCHHHHHHhh-hC--CCcEEEeccccCCCCCCCCccCCHHHHHHHHHcC-CCCEEEECCCC-cccHHHHHHCCCCCCc
Q 010240 407 SCKTPEEAHQAW-ID--GANYIGCGGVYPTNTKANNLTVGLDGLKTVCLAS-KLPVVAIGGIG-ISNASDVMKIGVSNLK 481 (514)
Q Consensus 407 s~~~~~e~~~a~-~~--g~d~v~~~~vf~t~~k~~~~~~g~~~l~~~~~~~-~~pv~a~GGi~-~~~~~~~~~~Ga~~~~ 481 (514)
.+.+.+++.... +. ..|.|++..-.+. .-|++.++++++.. ++||+.+.+-. .+.+..++++|++
T Consensus 66 ~~~~~~~al~~l~~~~~~~dliilD~~l~~-------~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~g~~--- 135 (157)
T 3hzh_A 66 TAADGEEAVIKYKNHYPNIDIVTLXITMPK-------MDGITCLSNIMEFDKNARVIMISALGKEQLVKDCLIKGAK--- 135 (157)
T ss_dssp EESSHHHHHHHHHHHGGGCCEEEECSSCSS-------SCHHHHHHHHHHHCTTCCEEEEESCCCHHHHHHHHHTTCS---
T ss_pred EECCHHHHHHHHHhcCCCCCEEEEeccCCC-------ccHHHHHHHHHhhCCCCcEEEEeccCcHHHHHHHHHcCCC---
Confidence 566777766544 33 5799988764442 23788899998765 78988887764 6677889999999
Q ss_pred eEEEeecccCCCCHHHHHHHHHHH
Q 010240 482 GVAVVSALFDRECILPESKKLHAV 505 (514)
Q Consensus 482 gva~~~~i~~~~~~~~~~~~~~~~ 505 (514)
++ +...-++.+..+.+.+.
T Consensus 136 ~~-----l~KP~~~~~l~~~i~~~ 154 (157)
T 3hzh_A 136 TF-----IVKPLDRAKVLQRVMSV 154 (157)
T ss_dssp EE-----EESSCCHHHHHHHHHHT
T ss_pred EE-----EeCCCCHHHHHHHHHHH
Confidence 65 34455555555555443
Done!