Query 010250
Match_columns 514
No_of_seqs 347 out of 2250
Neff 8.8
Searched_HMMs 46136
Date Thu Mar 28 22:48:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010250.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010250hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02760 4-aminobutyrate:pyruv 100.0 1.6E-92 3.4E-97 743.0 48.1 503 6-514 1-503 (504)
2 COG0161 BioA Adenosylmethionin 100.0 2.7E-89 5.8E-94 685.4 42.0 435 64-505 9-446 (449)
3 COG4992 ArgD Ornithine/acetylo 100.0 1.1E-87 2.4E-92 658.5 37.6 376 82-505 24-401 (404)
4 COG0160 GabT 4-aminobutyrate a 100.0 1.2E-84 2.5E-89 656.6 40.8 402 82-503 38-446 (447)
5 KOG1404 Alanine-glyoxylate ami 100.0 5.2E-84 1.1E-88 617.8 39.7 400 79-496 29-432 (442)
6 KOG1402 Ornithine aminotransfe 100.0 1.8E-83 3.9E-88 599.7 32.6 401 50-501 20-426 (427)
7 PRK07482 hypothetical protein; 100.0 2.4E-81 5.3E-86 655.1 46.4 439 67-506 15-458 (461)
8 PRK07481 hypothetical protein; 100.0 1.6E-80 3.5E-85 647.4 46.6 439 65-503 7-446 (449)
9 PRK05965 hypothetical protein; 100.0 1.8E-80 4E-85 648.1 45.6 436 68-505 14-450 (459)
10 PRK06105 aminotransferase; Pro 100.0 4.2E-79 9E-84 638.1 48.1 438 68-506 16-453 (460)
11 PRK07480 putative aminotransfe 100.0 4.3E-78 9.4E-83 629.1 47.2 433 68-505 18-451 (456)
12 PRK07036 hypothetical protein; 100.0 5.8E-78 1.3E-82 629.8 48.1 438 67-506 18-456 (466)
13 PRK08742 adenosylmethionine--8 100.0 3.7E-78 7.9E-83 630.2 46.0 435 66-504 29-469 (472)
14 PRK07030 adenosylmethionine--8 100.0 1.3E-77 2.7E-82 626.6 47.1 432 68-503 15-447 (466)
15 PRK07483 hypothetical protein; 100.0 1.7E-77 3.7E-82 623.1 45.8 418 82-504 12-439 (443)
16 PRK12403 putative aminotransfe 100.0 4E-77 8.8E-82 623.1 46.6 433 68-506 22-456 (460)
17 PRK06943 adenosylmethionine--8 100.0 4.3E-77 9.4E-82 621.1 45.8 425 68-503 22-447 (453)
18 PRK06916 adenosylmethionine--8 100.0 3.6E-77 7.8E-82 623.5 44.9 433 68-504 24-457 (460)
19 PRK07678 aminotransferase; Val 100.0 3.9E-76 8.5E-81 614.8 45.5 414 82-503 29-450 (451)
20 PRK06062 hypothetical protein; 100.0 4.8E-76 1E-80 613.5 44.3 419 68-504 24-447 (451)
21 PRK06541 hypothetical protein; 100.0 5.2E-75 1.1E-79 606.6 46.1 433 68-505 20-458 (460)
22 PRK06917 hypothetical protein; 100.0 1.2E-74 2.6E-79 602.4 46.0 417 82-505 14-440 (447)
23 PRK09221 beta alanine--pyruvat 100.0 6.5E-74 1.4E-78 596.5 45.7 426 68-503 18-444 (445)
24 PRK13360 omega amino acid--pyr 100.0 7.9E-74 1.7E-78 595.4 46.3 413 82-503 28-441 (442)
25 PRK06938 diaminobutyrate--2-ox 100.0 1.5E-73 3.2E-78 595.7 41.5 405 82-504 45-462 (464)
26 PRK11522 putrescine--2-oxoglut 100.0 1.4E-73 3E-78 594.5 40.8 388 81-508 62-457 (459)
27 PRK06173 adenosylmethionine--8 100.0 5.4E-73 1.2E-77 586.4 43.1 410 68-503 14-426 (429)
28 PRK07986 adenosylmethionine--8 100.0 1.2E-72 2.6E-77 583.1 44.1 409 68-502 13-423 (428)
29 TIGR03372 putres_am_tran putre 100.0 5.8E-73 1.3E-77 585.8 41.0 378 83-500 58-442 (442)
30 PRK05630 adenosylmethionine--8 100.0 1.8E-72 3.8E-77 582.0 43.1 407 68-502 12-420 (422)
31 PRK06931 diaminobutyrate--2-ox 100.0 1.6E-72 3.4E-77 587.8 42.5 407 82-505 40-457 (459)
32 PRK05639 4-aminobutyrate amino 100.0 4.6E-72 9.9E-77 583.4 43.2 401 82-504 35-445 (457)
33 PRK06082 4-aminobutyrate amino 100.0 1.8E-71 3.9E-76 579.9 42.8 401 82-507 54-456 (459)
34 TIGR00709 dat 2,4-diaminobutyr 100.0 2E-71 4.4E-76 578.9 43.0 408 82-506 21-439 (442)
35 PRK06058 4-aminobutyrate amino 100.0 2.9E-71 6.2E-76 578.4 41.5 399 82-502 38-442 (443)
36 PRK08593 4-aminobutyrate amino 100.0 9.9E-71 2.1E-75 573.2 42.7 404 82-504 24-431 (445)
37 PRK05964 adenosylmethionine--8 100.0 1.6E-69 3.6E-74 563.5 43.5 412 67-503 11-423 (423)
38 PRK05769 4-aminobutyrate amino 100.0 1.4E-69 3E-74 564.0 41.9 400 82-503 36-440 (441)
39 PLN02974 adenosylmethionine-8- 100.0 2E-69 4.3E-74 588.8 44.4 431 65-500 322-816 (817)
40 PRK07495 4-aminobutyrate amino 100.0 3.7E-69 8E-74 558.3 42.9 396 82-504 22-423 (425)
41 PRK08117 4-aminobutyrate amino 100.0 7E-68 1.5E-72 552.9 43.2 400 83-504 26-431 (433)
42 PRK04612 argD acetylornithine 100.0 5.1E-68 1.1E-72 546.9 41.2 383 81-505 21-406 (408)
43 TIGR00700 GABAtrnsam 4-aminobu 100.0 1.1E-67 2.3E-72 549.0 43.1 399 82-501 15-419 (420)
44 TIGR00699 GABAtrns_euk 4-amino 100.0 3.8E-68 8.2E-73 550.3 38.6 388 82-500 40-464 (464)
45 PRK08297 L-lysine aminotransfe 100.0 9.3E-68 2E-72 550.1 41.0 400 83-503 27-442 (443)
46 PRK06148 hypothetical protein; 100.0 1.1E-67 2.4E-72 595.7 44.4 399 81-503 605-1011(1013)
47 PRK08360 4-aminobutyrate amino 100.0 2.7E-67 5.9E-72 546.6 43.7 403 82-505 23-429 (443)
48 PRK06777 4-aminobutyrate amino 100.0 2.2E-67 4.9E-72 545.7 41.7 393 82-501 22-420 (421)
49 PRK06918 4-aminobutyrate amino 100.0 4.9E-67 1.1E-71 548.2 43.7 405 82-505 36-446 (451)
50 PRK09264 diaminobutyrate--2-ox 100.0 1.4E-67 3.1E-72 548.2 39.1 387 82-504 21-418 (425)
51 TIGR02407 ectoine_ectB diamino 100.0 1.4E-67 2.9E-72 545.8 38.5 383 82-501 17-411 (412)
52 COG0001 HemL Glutamate-1-semia 100.0 1.1E-67 2.3E-72 522.9 35.1 419 52-504 6-430 (432)
53 PRK04013 argD acetylornithine/ 100.0 2.3E-67 5E-72 532.1 38.3 355 82-503 6-361 (364)
54 TIGR00508 bioA adenosylmethion 100.0 1.4E-66 3.1E-71 539.7 44.5 410 68-502 15-426 (427)
55 PRK09792 4-aminobutyrate trans 100.0 4.5E-67 9.8E-72 543.4 40.6 393 82-501 22-420 (421)
56 PRK03715 argD acetylornithine 100.0 7.3E-67 1.6E-71 537.0 39.1 373 81-503 17-394 (395)
57 TIGR03246 arg_catab_astC succi 100.0 1.5E-66 3.2E-71 537.3 41.0 378 82-503 17-396 (397)
58 KOG1401 Acetylornithine aminot 100.0 9.8E-67 2.1E-71 503.1 34.9 386 79-503 35-431 (433)
59 PRK12389 glutamate-1-semialdeh 100.0 4E-66 8.7E-71 537.4 40.1 411 60-502 13-427 (428)
60 PLN02624 ornithine-delta-amino 100.0 3.8E-65 8.3E-70 535.3 42.6 390 82-509 57-451 (474)
61 TIGR03251 LAT_fam L-lysine 6-t 100.0 1.5E-65 3.2E-70 533.2 38.6 396 82-498 17-430 (431)
62 PRK12381 bifunctional succinyl 100.0 3.9E-65 8.4E-70 528.3 40.9 380 82-505 21-402 (406)
63 PLN00144 acetylornithine trans 100.0 2.3E-65 5E-70 524.4 38.0 371 86-503 1-381 (382)
64 PLN02482 glutamate-1-semialdeh 100.0 4.6E-65 1E-69 530.7 39.9 414 52-502 52-473 (474)
65 PRK06149 hypothetical protein; 100.0 1E-64 2.2E-69 571.8 44.2 395 82-502 567-970 (972)
66 PRK07046 aminotransferase; Val 100.0 1.3E-64 2.8E-69 526.9 39.3 388 81-504 56-452 (453)
67 PF00202 Aminotran_3: Aminotra 100.0 6.2E-66 1.3E-70 520.0 26.2 337 85-439 1-338 (339)
68 PRK00615 glutamate-1-semialdeh 100.0 5.9E-64 1.3E-68 518.5 40.2 408 58-504 12-430 (433)
69 PRK04073 rocD ornithine--oxo-a 100.0 4.8E-62 1E-66 504.3 39.6 371 82-500 22-395 (396)
70 PRK01278 argD acetylornithine 100.0 1.5E-61 3.3E-66 499.9 40.8 373 82-502 13-388 (389)
71 PRK05093 argD bifunctional N-s 100.0 2.2E-59 4.9E-64 485.4 40.9 378 82-503 22-401 (403)
72 TIGR01885 Orn_aminotrans ornit 100.0 2.4E-59 5.2E-64 485.1 40.3 379 82-500 19-400 (401)
73 PRK00062 glutamate-1-semialdeh 100.0 6.4E-59 1.4E-63 483.8 41.1 418 53-503 4-425 (426)
74 TIGR00713 hemL glutamate-1-sem 100.0 1.1E-58 2.3E-63 483.6 41.7 409 59-502 8-422 (423)
75 PRK08088 4-aminobutyrate amino 100.0 1.8E-58 3.8E-63 481.0 40.7 395 82-502 23-423 (425)
76 PRK03244 argD acetylornithine 100.0 3E-58 6.4E-63 476.9 40.6 371 82-504 25-396 (398)
77 KOG1403 Predicted alanine-glyo 100.0 2.2E-59 4.7E-64 432.6 26.9 406 82-510 29-445 (452)
78 PRK02936 argD acetylornithine 100.0 1.1E-57 2.3E-62 469.5 39.2 365 82-500 11-377 (377)
79 PRK00854 rocD ornithine--oxo-a 100.0 5.2E-57 1.1E-61 468.1 39.7 375 82-501 23-400 (401)
80 PTZ00125 ornithine aminotransf 100.0 3.1E-56 6.8E-61 462.3 40.9 381 82-504 13-397 (400)
81 PRK06209 glutamate-1-semialdeh 100.0 1.9E-56 4.1E-61 464.9 38.5 377 81-506 29-409 (431)
82 PRK04260 acetylornithine amino 100.0 1.7E-54 3.7E-59 445.1 37.5 363 82-500 11-375 (375)
83 PRK02627 acetylornithine amino 100.0 1.3E-53 2.8E-58 442.2 39.3 372 82-502 21-394 (396)
84 cd00610 OAT_like Acetyl ornith 100.0 3.3E-53 7.1E-58 441.6 41.6 395 81-500 17-413 (413)
85 KOG1405 4-aminobutyrate aminot 100.0 1.4E-48 3E-53 368.4 26.3 391 82-502 58-483 (484)
86 TIGR00707 argD acetylornithine 100.0 2.7E-47 5.8E-52 392.6 37.6 370 81-500 8-379 (379)
87 PLN02822 serine palmitoyltrans 100.0 5.1E-40 1.1E-44 345.6 31.1 386 50-504 63-479 (481)
88 PRK07505 hypothetical protein; 100.0 1.3E-38 2.9E-43 330.1 32.2 350 81-502 27-399 (402)
89 PRK13393 5-aminolevulinate syn 100.0 1E-35 2.2E-40 308.9 29.3 334 98-503 43-397 (406)
90 COG0156 BioF 7-keto-8-aminopel 100.0 2.4E-34 5.2E-39 288.6 28.0 335 91-499 31-387 (388)
91 TIGR01821 5aminolev_synth 5-am 100.0 5.5E-34 1.2E-38 295.7 30.2 335 98-503 43-397 (402)
92 PRK09064 5-aminolevulinate syn 100.0 6.8E-34 1.5E-38 295.6 29.4 334 99-503 45-398 (407)
93 PLN03227 serine palmitoyltrans 100.0 6.7E-33 1.5E-37 285.4 25.5 342 103-507 1-387 (392)
94 PLN02955 8-amino-7-oxononanoat 100.0 4.3E-32 9.4E-37 278.3 28.4 338 99-503 101-462 (476)
95 PRK07179 hypothetical protein; 100.0 2.3E-31 4.9E-36 276.6 29.9 337 82-503 44-399 (407)
96 TIGR01825 gly_Cac_T_rel pyrido 100.0 6E-31 1.3E-35 271.6 30.0 347 82-502 16-381 (385)
97 PRK05958 8-amino-7-oxononanoat 100.0 1.5E-30 3.3E-35 268.5 29.4 341 85-500 25-385 (385)
98 KOG1359 Glycine C-acetyltransf 100.0 5.4E-30 1.2E-34 237.2 25.6 343 83-502 49-412 (417)
99 PRK13392 5-aminolevulinate syn 100.0 1.5E-29 3.3E-34 263.1 27.5 335 98-503 44-398 (410)
100 TIGR01822 2am3keto_CoA 2-amino 100.0 7.9E-29 1.7E-33 256.5 32.7 349 82-502 20-389 (393)
101 PRK06939 2-amino-3-ketobutyrat 100.0 3.3E-28 7.2E-33 252.1 33.0 348 84-503 26-394 (397)
102 PRK05937 8-amino-7-oxononanoat 100.0 6E-28 1.3E-32 247.6 28.2 328 100-507 4-355 (370)
103 TIGR00858 bioF 8-amino-7-oxono 100.0 3.5E-27 7.6E-32 241.0 31.2 338 86-497 3-360 (360)
104 KOG1358 Serine palmitoyltransf 100.0 5.2E-28 1.1E-32 232.4 15.8 385 51-503 48-466 (467)
105 PLN02483 serine palmitoyltrans 100.0 2.7E-26 5.8E-31 242.1 30.2 335 97-505 97-469 (489)
106 KOG1360 5-aminolevulinate synt 99.9 2.7E-25 5.9E-30 213.7 23.7 329 105-504 176-526 (570)
107 cd06454 KBL_like KBL_like; thi 99.9 3.5E-24 7.6E-29 218.0 29.9 328 100-499 1-348 (349)
108 cd00613 GDC-P Glycine cleavage 99.9 5.6E-23 1.2E-27 213.1 24.5 337 107-496 23-398 (398)
109 COG0436 Aspartate/tyrosine/aro 99.9 1.1E-21 2.5E-26 201.1 29.9 339 100-502 28-391 (393)
110 PRK06225 aspartate aminotransf 99.9 2.5E-21 5.3E-26 199.6 29.9 343 97-504 25-378 (380)
111 PRK03317 histidinol-phosphate 99.9 1.9E-21 4E-26 199.6 28.5 325 101-501 27-363 (368)
112 TIGR03576 pyridox_MJ0158 pyrid 99.9 1E-21 2.3E-26 198.6 25.7 302 112-500 28-345 (346)
113 COG1104 NifS Cysteine sulfinat 99.9 2.6E-21 5.7E-26 191.3 22.4 343 101-505 3-380 (386)
114 PRK07682 hypothetical protein; 99.9 1.3E-20 2.9E-25 194.0 28.4 336 101-503 21-377 (378)
115 PRK06108 aspartate aminotransf 99.9 2.5E-20 5.5E-25 192.2 30.1 339 101-501 25-381 (382)
116 PRK02731 histidinol-phosphate 99.9 2.1E-20 4.5E-25 191.8 27.8 324 98-501 30-365 (367)
117 PRK07324 transaminase; Validat 99.9 1.2E-20 2.6E-25 193.7 25.9 336 95-502 21-370 (373)
118 PRK13520 L-tyrosine decarboxyl 99.9 4.5E-20 9.8E-25 189.5 27.5 326 115-501 30-370 (371)
119 TIGR01141 hisC histidinol-phos 99.9 3E-20 6.5E-25 189.0 25.7 316 100-497 19-346 (346)
120 PRK03158 histidinol-phosphate 99.9 2.6E-20 5.6E-25 190.5 25.0 318 100-499 29-358 (359)
121 PLN00175 aminotransferase fami 99.9 2.2E-19 4.8E-24 186.7 30.8 338 100-501 54-412 (413)
122 PLN02721 threonine aldolase 99.9 1.3E-19 2.8E-24 184.8 28.0 335 101-501 6-351 (353)
123 COG0079 HisC Histidinol-phosph 99.9 1.3E-19 2.8E-24 182.8 27.5 321 101-502 23-354 (356)
124 TIGR03402 FeS_nifS cysteine de 99.9 2.5E-19 5.5E-24 184.6 30.1 334 102-504 2-374 (379)
125 PRK06207 aspartate aminotransf 99.9 4.8E-19 1E-23 183.8 32.3 346 99-503 38-403 (405)
126 TIGR03392 FeS_syn_CsdA cystein 99.9 1E-19 2.2E-24 188.7 27.0 341 99-503 16-396 (398)
127 PRK00950 histidinol-phosphate 99.9 8.1E-20 1.8E-24 187.0 25.8 320 97-500 31-360 (361)
128 cd06502 TA_like Low-specificit 99.9 7.2E-20 1.6E-24 185.5 24.9 322 104-498 1-337 (338)
129 PRK08153 histidinol-phosphate 99.9 9.4E-20 2E-24 186.9 26.0 325 100-503 32-366 (369)
130 PRK01533 histidinol-phosphate 99.9 4.8E-20 1E-24 188.5 23.7 326 98-504 27-357 (366)
131 cd00609 AAT_like Aspartate ami 99.9 1.2E-19 2.5E-24 184.3 26.3 293 145-497 37-349 (350)
132 PRK10874 cysteine sulfinate de 99.9 2.8E-19 6E-24 185.7 28.3 340 99-503 19-399 (401)
133 PRK09295 bifunctional cysteine 99.9 2.3E-19 5.1E-24 186.5 27.5 340 99-501 23-403 (406)
134 PRK05764 aspartate aminotransf 99.8 9.5E-19 2.1E-23 181.2 29.8 340 99-502 30-391 (393)
135 COG0520 csdA Selenocysteine ly 99.8 4.5E-19 9.9E-24 181.7 26.4 344 99-501 22-404 (405)
136 PRK09148 aminotransferase; Val 99.8 1.8E-18 3.9E-23 179.6 31.3 350 98-507 28-395 (405)
137 PRK09331 Sep-tRNA:Cys-tRNA syn 99.8 9E-19 2E-23 180.7 28.5 340 112-502 27-381 (387)
138 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 1.7E-19 3.6E-24 185.1 22.6 307 144-502 51-368 (370)
139 PRK08636 aspartate aminotransf 99.8 3.2E-18 7E-23 177.7 31.3 351 98-503 31-401 (403)
140 PRK07366 succinyldiaminopimela 99.8 1.5E-18 3.2E-23 179.4 28.5 341 98-499 28-387 (388)
141 PRK07681 aspartate aminotransf 99.8 1.3E-18 2.7E-23 180.5 28.0 335 98-498 30-384 (399)
142 PRK07309 aromatic amino acid a 99.8 4.1E-18 8.8E-23 176.2 31.6 337 100-503 30-389 (391)
143 PRK08960 hypothetical protein; 99.8 2.8E-18 6E-23 177.3 30.0 337 99-501 31-386 (387)
144 PLN02656 tyrosine transaminase 99.8 5.1E-18 1.1E-22 176.4 32.1 346 97-503 28-404 (409)
145 PRK08363 alanine aminotransfer 99.8 3E-18 6.6E-23 177.6 30.2 346 98-502 28-394 (398)
146 PRK06348 aspartate aminotransf 99.8 3.6E-18 7.8E-23 176.2 30.4 335 101-498 30-381 (384)
147 cd06453 SufS_like Cysteine des 99.8 1.5E-18 3.2E-23 178.5 27.4 326 114-496 8-373 (373)
148 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 1.3E-18 2.8E-23 177.5 26.3 322 118-500 11-355 (355)
149 PLN02855 Bifunctional selenocy 99.8 1.4E-18 2.9E-23 181.8 26.7 343 99-503 32-419 (424)
150 PRK07777 aminotransferase; Val 99.8 3.3E-18 7.1E-23 176.8 29.2 340 101-500 25-384 (387)
151 PRK09082 methionine aminotrans 99.8 2.4E-18 5.1E-23 177.7 27.7 337 100-498 30-385 (386)
152 PLN00143 tyrosine/nicotianamin 99.8 7.1E-18 1.5E-22 175.3 31.3 350 95-504 27-406 (409)
153 PRK13034 serine hydroxymethylt 99.8 4.1E-18 8.8E-23 177.0 29.3 321 118-502 41-392 (416)
154 PRK07568 aspartate aminotransf 99.8 6.2E-18 1.3E-22 175.3 30.5 336 99-504 29-394 (397)
155 PRK08175 aminotransferase; Val 99.8 6.5E-18 1.4E-22 175.0 30.5 343 99-502 28-389 (395)
156 cd06451 AGAT_like Alanine-glyo 99.8 3.1E-18 6.7E-23 174.9 27.5 321 117-500 10-355 (356)
157 PRK08068 transaminase; Reviewe 99.8 5.7E-18 1.2E-22 175.1 29.7 336 98-498 30-385 (389)
158 PRK14809 histidinol-phosphate 99.8 2.4E-18 5.2E-23 175.8 26.5 322 98-501 28-356 (357)
159 PRK13355 bifunctional HTH-doma 99.8 3.9E-18 8.5E-23 182.3 29.1 342 97-503 143-515 (517)
160 PRK12414 putative aminotransfe 99.8 5.6E-18 1.2E-22 174.7 29.2 337 100-498 29-383 (384)
161 PRK06358 threonine-phosphate d 99.8 7.2E-18 1.6E-22 172.0 29.4 321 100-500 19-353 (354)
162 PLN00145 tyrosine/nicotianamin 99.8 9E-18 1.9E-22 175.3 30.5 343 99-504 51-426 (430)
163 PRK08056 threonine-phosphate d 99.8 5E-18 1.1E-22 173.4 28.0 326 97-500 17-353 (356)
164 PRK06290 aspartate aminotransf 99.8 7.2E-18 1.6E-22 175.0 29.5 350 98-504 42-407 (410)
165 PRK02610 histidinol-phosphate 99.8 5E-18 1.1E-22 174.5 28.0 333 100-503 28-372 (374)
166 COG1168 MalY Bifunctional PLP- 99.8 1.2E-17 2.5E-22 162.4 28.6 327 117-502 39-386 (388)
167 TIGR01979 sufS cysteine desulf 99.8 9.1E-18 2E-22 174.4 30.2 341 101-503 20-402 (403)
168 PRK08912 hypothetical protein; 99.8 7.1E-18 1.5E-22 174.2 29.1 337 101-501 27-385 (387)
169 TIGR03537 DapC succinyldiamino 99.8 7.2E-18 1.6E-22 171.8 28.6 330 101-498 1-349 (350)
170 PRK05957 aspartate aminotransf 99.8 1.3E-17 2.7E-22 172.4 30.7 340 102-504 29-387 (389)
171 PLN02187 rooty/superroot1 99.8 5.1E-18 1.1E-22 178.5 28.0 352 97-506 63-442 (462)
172 PRK09147 succinyldiaminopimela 99.8 1.3E-17 2.8E-22 172.8 30.6 338 98-501 27-395 (396)
173 PRK08361 aspartate aminotransf 99.8 6E-18 1.3E-22 175.0 27.9 337 100-502 33-390 (391)
174 PRK02948 cysteine desulfurase; 99.8 4.4E-18 9.5E-23 175.5 26.5 334 101-504 2-376 (381)
175 TIGR03539 DapC_actino succinyl 99.8 3.6E-18 7.9E-23 174.4 25.5 320 98-496 19-356 (357)
176 PRK15481 transcriptional regul 99.8 4.8E-18 1E-22 177.9 26.9 327 100-501 85-430 (431)
177 PRK07683 aminotransferase A; V 99.8 1.8E-17 3.9E-22 171.2 30.8 337 100-501 28-382 (387)
178 PLN03026 histidinol-phosphate 99.8 7.2E-18 1.6E-22 173.5 27.7 320 98-498 50-378 (380)
179 PTZ00433 tyrosine aminotransfe 99.8 2.1E-17 4.6E-22 172.0 31.3 350 92-503 25-409 (412)
180 TIGR01976 am_tr_V_VC1184 cyste 99.8 5.8E-18 1.3E-22 175.5 27.0 329 100-496 18-397 (397)
181 PRK14807 histidinol-phosphate 99.8 1.8E-17 3.9E-22 168.9 30.0 317 102-500 24-350 (351)
182 TIGR03540 DapC_direct LL-diami 99.8 1.2E-17 2.6E-22 172.3 28.9 337 98-498 27-382 (383)
183 PRK06107 aspartate aminotransf 99.8 1.9E-17 4.2E-22 171.8 30.6 351 99-503 32-401 (402)
184 PRK05942 aspartate aminotransf 99.8 1.4E-17 3E-22 172.4 29.4 337 98-498 33-388 (394)
185 PRK09105 putative aminotransfe 99.8 7.3E-18 1.6E-22 172.8 26.8 318 100-500 43-368 (370)
186 PRK07337 aminotransferase; Val 99.8 1.7E-17 3.7E-22 171.5 29.4 341 99-500 29-387 (388)
187 PRK07865 N-succinyldiaminopime 99.8 8.3E-18 1.8E-22 172.3 26.8 321 98-497 25-363 (364)
188 PRK09276 LL-diaminopimelate am 99.8 1.5E-17 3.3E-22 171.7 28.7 336 99-498 30-384 (385)
189 PRK05387 histidinol-phosphate 99.8 7.6E-18 1.6E-22 171.9 26.1 319 99-501 23-352 (353)
190 TIGR01264 tyr_amTase_E tyrosin 99.8 2.4E-17 5.3E-22 171.1 30.2 341 99-502 30-399 (401)
191 PRK03321 putative aminotransfe 99.8 4.2E-18 9.1E-23 173.7 23.9 320 101-501 23-350 (352)
192 PTZ00377 alanine aminotransfer 99.8 3.1E-17 6.8E-22 173.9 31.2 342 118-507 90-480 (481)
193 PRK05664 threonine-phosphate d 99.8 1E-17 2.2E-22 169.2 25.6 303 100-502 20-328 (330)
194 TIGR02006 IscS cysteine desulf 99.8 1.8E-17 4E-22 172.0 28.1 338 100-504 4-379 (402)
195 TIGR01977 am_tr_V_EF2568 cyste 99.8 3.1E-17 6.8E-22 168.8 29.3 323 117-498 12-375 (376)
196 PRK10534 L-threonine aldolase; 99.8 6E-18 1.3E-22 171.2 23.6 322 102-501 1-332 (333)
197 PRK04870 histidinol-phosphate 99.8 1.5E-17 3.3E-22 169.8 26.8 320 99-499 25-355 (356)
198 PRK07550 hypothetical protein; 99.8 4.3E-17 9.4E-22 168.3 30.3 339 98-499 27-384 (386)
199 TIGR02326 transamin_PhnW 2-ami 99.8 2.2E-17 4.8E-22 169.1 27.8 302 144-500 35-360 (363)
200 PRK14808 histidinol-phosphate 99.8 4.5E-18 9.6E-23 172.1 22.4 321 88-498 7-333 (335)
201 PF00155 Aminotran_1_2: Aminot 99.8 6.8E-18 1.5E-22 172.8 23.6 337 101-496 2-363 (363)
202 TIGR01814 kynureninase kynuren 99.8 2.8E-17 6.1E-22 170.8 28.2 340 98-500 26-405 (406)
203 TIGR03403 nifS_epsilon cystein 99.8 3.7E-17 8E-22 168.6 28.9 338 102-504 2-377 (382)
204 TIGR03812 tyr_de_CO2_Arch tyro 99.8 3.1E-17 6.6E-22 168.6 27.1 322 117-498 32-372 (373)
205 TIGR03538 DapC_gpp succinyldia 99.8 7.1E-17 1.5E-21 167.1 29.7 336 96-499 24-392 (393)
206 KOG1357 Serine palmitoyltransf 99.8 2.4E-18 5.2E-23 169.0 16.9 327 102-500 138-500 (519)
207 PRK09265 aminotransferase AlaT 99.8 8.1E-17 1.8E-21 167.3 29.2 344 97-503 30-402 (404)
208 PRK05839 hypothetical protein; 99.8 1.7E-16 3.6E-21 163.2 30.9 329 98-501 22-373 (374)
209 TIGR01437 selA_rel uncharacter 99.8 1.3E-16 2.8E-21 162.9 29.8 327 100-499 8-362 (363)
210 PRK06959 putative threonine-ph 99.8 2.9E-17 6.4E-22 166.3 24.5 306 100-504 24-335 (339)
211 PRK06425 histidinol-phosphate 99.8 5.3E-17 1.2E-21 164.1 25.8 282 142-500 38-331 (332)
212 PLN02409 serine--glyoxylate am 99.8 6.3E-17 1.4E-21 167.7 26.9 306 143-503 41-373 (401)
213 TIGR01140 L_thr_O3P_dcar L-thr 99.8 3.5E-17 7.6E-22 165.3 24.1 270 146-496 49-329 (330)
214 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 8E-17 1.7E-21 164.8 26.7 336 114-500 10-360 (361)
215 PF00266 Aminotran_5: Aminotra 99.8 2.8E-17 6E-22 168.9 23.4 328 102-492 2-371 (371)
216 PRK06855 aminotransferase; Val 99.8 1.5E-16 3.3E-21 166.5 28.8 352 99-502 31-429 (433)
217 TIGR01265 tyr_nico_aTase tyros 99.8 1.9E-16 4.2E-21 164.4 29.2 346 98-502 29-401 (403)
218 PRK08354 putative aminotransfe 99.8 2.4E-16 5.3E-21 157.8 28.4 295 98-499 6-309 (311)
219 PRK06836 aspartate aminotransf 99.8 4.7E-16 1E-20 161.0 31.3 337 100-503 33-392 (394)
220 PLN02231 alanine transaminase 99.8 2E-16 4.3E-21 168.5 28.7 345 118-508 142-533 (534)
221 PRK13238 tnaA tryptophanase/L- 99.8 7E-16 1.5E-20 161.5 32.1 338 120-501 58-432 (460)
222 PLN02672 methionine S-methyltr 99.8 3.4E-16 7.4E-21 174.4 30.9 353 93-501 690-1079(1082)
223 PRK05166 histidinol-phosphate 99.8 1.9E-16 4.2E-21 162.6 26.6 322 99-500 35-369 (371)
224 PRK07392 threonine-phosphate d 99.8 2.7E-16 5.8E-21 160.9 27.3 322 100-500 22-357 (360)
225 PRK03967 histidinol-phosphate 99.8 2.3E-16 5E-21 159.8 26.2 309 98-501 16-333 (337)
226 PRK01688 histidinol-phosphate 99.8 6.3E-17 1.4E-21 164.8 21.9 282 145-497 58-351 (351)
227 PRK13479 2-aminoethylphosphona 99.8 5E-16 1.1E-20 159.4 28.5 305 144-503 37-364 (368)
228 PRK07590 L,L-diaminopimelate a 99.8 8.8E-16 1.9E-20 159.8 29.4 348 99-500 33-409 (409)
229 PLN02651 cysteine desulfurase 99.8 1.4E-16 3E-21 163.2 23.0 323 102-490 2-364 (364)
230 PLN02376 1-aminocyclopropane-1 99.7 7.1E-16 1.5E-20 163.2 27.1 309 144-504 98-440 (496)
231 PLN02607 1-aminocyclopropane-1 99.7 1.2E-15 2.6E-20 159.7 28.3 308 142-502 97-437 (447)
232 PRK09440 avtA valine--pyruvate 99.7 2.4E-15 5.1E-20 157.0 30.5 349 101-504 31-413 (416)
233 PRK09257 aromatic amino acid a 99.7 3.8E-16 8.3E-21 161.8 24.1 335 101-500 27-396 (396)
234 cd00616 AHBA_syn 3-amino-5-hyd 99.7 7.6E-16 1.7E-20 156.9 25.5 305 123-497 3-352 (352)
235 PTZ00376 aspartate aminotransf 99.7 4.3E-16 9.3E-21 161.8 23.8 341 99-501 28-402 (404)
236 KOG0257 Kynurenine aminotransf 99.7 2.4E-16 5.3E-21 154.7 19.7 277 118-439 46-344 (420)
237 PRK00011 glyA serine hydroxyme 99.7 4.6E-15 1E-19 154.8 30.5 332 100-502 25-389 (416)
238 PRK07908 hypothetical protein; 99.7 2.2E-15 4.9E-20 153.4 27.3 312 99-501 21-346 (349)
239 TIGR03542 DAPAT_plant LL-diami 99.7 1.8E-15 3.8E-20 157.2 26.2 342 99-500 32-402 (402)
240 PLN02450 1-aminocyclopropane-1 99.7 3.2E-15 6.9E-20 157.6 28.4 308 144-504 90-432 (468)
241 cd00378 SHMT Serine-glycine hy 99.7 4.2E-15 9E-20 154.4 28.9 333 100-502 19-385 (402)
242 KOG0259 Tyrosine aminotransfer 99.7 5.8E-15 1.3E-19 142.6 26.5 346 100-504 61-435 (447)
243 PRK04781 histidinol-phosphate 99.7 1.9E-15 4.2E-20 154.7 24.3 288 146-500 61-361 (364)
244 cd06450 DOPA_deC_like DOPA dec 99.7 1.8E-15 3.8E-20 153.9 23.8 288 143-498 37-344 (345)
245 COG1167 ARO8 Transcriptional r 99.7 1.9E-14 4.1E-19 151.0 31.5 345 97-504 86-457 (459)
246 PRK14012 cysteine desulfurase; 99.7 2E-14 4.3E-19 149.4 30.9 337 100-504 4-381 (404)
247 COG0075 Serine-pyruvate aminot 99.7 8.6E-15 1.9E-19 146.3 26.8 326 118-504 17-365 (383)
248 PRK04635 histidinol-phosphate 99.7 4.2E-15 9.1E-20 151.7 23.6 280 146-499 62-352 (354)
249 PLN03226 serine hydroxymethylt 99.7 1.4E-14 3.1E-19 151.9 27.3 326 117-501 46-418 (475)
250 PTZ00094 serine hydroxymethylt 99.7 8E-15 1.7E-19 154.2 25.4 343 100-502 34-408 (452)
251 cd00614 CGS_like CGS_like: Cys 99.7 1.3E-15 2.9E-20 156.1 17.5 237 142-439 38-293 (369)
252 COG2008 GLY1 Threonine aldolas 99.7 3.4E-15 7.3E-20 145.0 19.0 331 103-500 2-341 (342)
253 PRK09275 aspartate aminotransf 99.7 1.3E-14 2.7E-19 152.9 24.6 303 163-509 162-524 (527)
254 PLN02397 aspartate transaminas 99.7 1.7E-14 3.7E-19 150.5 24.7 217 257-501 181-420 (423)
255 PRK04366 glycine dehydrogenase 99.7 4.8E-14 1E-18 149.1 27.9 340 116-507 81-453 (481)
256 TIGR03801 asp_4_decarbox aspar 99.7 8.3E-15 1.8E-19 154.0 21.3 346 114-505 104-519 (521)
257 PRK06767 methionine gamma-lyas 99.7 6.7E-15 1.4E-19 151.6 20.0 285 143-501 60-384 (386)
258 PRK08637 hypothetical protein; 99.6 6.9E-14 1.5E-18 144.5 26.8 291 163-503 70-387 (388)
259 KOG1549 Cysteine desulfurase N 99.6 1.1E-14 2.3E-19 145.1 18.7 349 100-503 44-419 (428)
260 PRK13580 serine hydroxymethylt 99.6 6.1E-14 1.3E-18 144.9 24.9 216 256-502 208-445 (493)
261 KOG1368 Threonine aldolase [Am 99.6 2.3E-14 5E-19 134.1 19.5 333 101-500 22-366 (384)
262 TIGR01325 O_suc_HS_sulf O-succ 99.6 1.3E-14 2.9E-19 149.1 19.0 236 143-439 53-306 (380)
263 PRK03080 phosphoserine aminotr 99.6 4.4E-14 9.5E-19 145.3 22.7 321 118-504 24-375 (378)
264 PLN02242 methionine gamma-lyas 99.6 1.8E-14 3.9E-19 149.3 19.8 238 142-439 74-334 (418)
265 cd00617 Tnase_like Tryptophana 99.6 1.8E-13 3.9E-18 141.6 26.6 353 97-502 17-408 (431)
266 TIGR01788 Glu-decarb-GAD gluta 99.6 2E-13 4.4E-18 141.5 25.8 344 117-503 53-430 (431)
267 PRK02769 histidine decarboxyla 99.6 1.1E-12 2.3E-17 134.2 28.9 294 143-501 64-371 (380)
268 TIGR03235 DNA_S_dndA cysteine 99.6 8.6E-14 1.9E-18 142.0 20.4 303 114-472 7-321 (353)
269 PLN02368 alanine transaminase 99.6 1.4E-13 3E-18 142.3 21.9 249 144-436 111-392 (407)
270 PRK08249 cystathionine gamma-s 99.6 1.3E-13 2.8E-18 142.3 20.1 235 142-440 62-317 (398)
271 PRK11658 UDP-4-amino-4-deoxy-L 99.6 1.7E-12 3.6E-17 133.6 28.0 313 119-500 14-377 (379)
272 PRK07049 methionine gamma-lyas 99.6 1.4E-13 3.1E-18 143.1 20.0 239 143-440 82-350 (427)
273 PLN03032 serine decarboxylase; 99.6 1.9E-12 4.2E-17 131.5 27.2 317 118-498 36-372 (374)
274 PRK06234 methionine gamma-lyas 99.6 2.2E-13 4.9E-18 140.8 20.3 237 142-440 62-321 (400)
275 PRK00451 glycine dehydrogenase 99.6 1.4E-12 3E-17 137.4 26.7 286 146-500 114-446 (447)
276 TIGR01328 met_gam_lyase methio 99.6 2.9E-13 6.3E-18 139.5 20.9 238 143-439 58-313 (391)
277 PRK06460 hypothetical protein; 99.5 3.6E-13 7.7E-18 138.2 20.4 235 142-440 43-298 (376)
278 PRK08133 O-succinylhomoserine 99.5 1.9E-13 4.2E-18 140.8 17.8 233 143-439 60-313 (390)
279 TIGR02080 O_succ_thio_ly O-suc 99.5 4.6E-13 9.9E-18 137.5 20.4 238 142-440 49-305 (382)
280 PRK07810 O-succinylhomoserine 99.5 5E-13 1.1E-17 138.1 20.7 234 143-440 69-324 (403)
281 PRK07582 cystathionine gamma-l 99.5 1.2E-12 2.7E-17 133.8 23.3 229 142-439 49-300 (366)
282 KOG0256 1-aminocyclopropane-1- 99.5 5.4E-12 1.2E-16 123.4 26.3 291 161-502 145-461 (471)
283 PRK12566 glycine dehydrogenase 99.5 1.3E-12 2.8E-17 143.2 24.6 314 142-504 541-878 (954)
284 PRK08045 cystathionine gamma-s 99.5 6.4E-13 1.4E-17 136.5 20.6 238 142-440 50-306 (386)
285 PRK05968 hypothetical protein; 99.5 1.4E-12 3E-17 134.5 23.0 230 143-439 62-310 (389)
286 TIGR01324 cysta_beta_ly_B cyst 99.5 2.7E-13 5.9E-18 138.7 17.4 236 144-440 50-303 (377)
287 TIGR01366 serC_3 phosphoserine 99.5 4.8E-13 1E-17 136.5 19.1 317 118-502 15-360 (361)
288 PRK08776 cystathionine gamma-s 99.5 1.7E-12 3.7E-17 134.1 23.4 237 143-440 59-314 (405)
289 PRK07504 O-succinylhomoserine 99.5 3.9E-13 8.4E-18 138.9 18.3 237 143-440 64-319 (398)
290 TIGR03588 PseC UDP-4-keto-6-de 99.5 9.9E-12 2.1E-16 128.1 28.6 316 119-500 10-380 (380)
291 TIGR02379 ECA_wecE TDP-4-keto- 99.5 9.5E-12 2.1E-16 127.6 28.2 312 119-500 11-375 (376)
292 PLN02414 glycine dehydrogenase 99.5 3.1E-12 6.8E-17 142.7 26.5 314 142-505 566-910 (993)
293 PRK08574 cystathionine gamma-s 99.5 9.9E-13 2.2E-17 135.2 20.0 235 143-439 52-307 (385)
294 PRK07811 cystathionine gamma-s 99.5 1.4E-12 3E-17 134.4 20.6 237 143-440 60-315 (388)
295 PRK08247 cystathionine gamma-s 99.5 1.4E-12 3E-17 133.6 20.3 232 142-439 50-288 (366)
296 PRK08861 cystathionine gamma-s 99.5 1E-12 2.2E-17 134.7 19.2 237 143-440 52-307 (388)
297 PRK07503 methionine gamma-lyas 99.5 1.5E-12 3.3E-17 134.7 20.7 239 143-440 64-320 (403)
298 PRK09028 cystathionine beta-ly 99.5 1.2E-12 2.7E-17 134.0 19.3 235 144-439 61-313 (394)
299 PRK06084 O-acetylhomoserine am 99.5 2E-12 4.2E-17 134.5 20.8 244 143-440 57-346 (425)
300 PRK05367 glycine dehydrogenase 99.5 1.1E-11 2.4E-16 139.0 27.9 316 143-505 541-878 (954)
301 PRK07269 cystathionine gamma-s 99.5 1.5E-12 3.3E-17 132.7 19.2 230 143-439 53-288 (364)
302 TIGR01326 OAH_OAS_sulfhy OAH/O 99.5 2E-12 4.4E-17 134.5 20.0 160 142-356 55-219 (418)
303 PRK05355 3-phosphoserine/phosp 99.5 3.5E-12 7.6E-17 130.0 21.2 321 117-502 14-358 (360)
304 TIGR01364 serC_1 phosphoserine 99.5 4.3E-12 9.3E-17 128.7 21.5 321 118-502 4-348 (349)
305 COG3977 Alanine-alpha-ketoisov 99.5 2.6E-11 5.6E-16 114.0 24.6 312 143-505 77-414 (417)
306 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.5 3.9E-11 8.3E-16 123.4 28.5 310 119-500 11-374 (375)
307 PRK05994 O-acetylhomoserine am 99.5 3.6E-12 7.7E-17 132.8 21.0 242 143-440 62-350 (427)
308 PRK15407 lipopolysaccharide bi 99.5 3.3E-11 7.2E-16 125.8 28.1 300 145-501 64-435 (438)
309 PRK07050 cystathionine beta-ly 99.5 4.6E-12 9.9E-17 130.7 21.0 212 142-417 63-281 (394)
310 PLN02880 tyrosine decarboxylas 99.5 2.4E-11 5.2E-16 128.3 26.7 330 143-504 121-486 (490)
311 PRK04311 selenocysteine syntha 99.5 2.3E-10 4.9E-15 119.6 32.9 318 117-501 98-463 (464)
312 PLN02509 cystathionine beta-ly 99.4 4.3E-12 9.4E-17 132.4 19.5 230 144-438 133-384 (464)
313 KOG2862 Alanine-glyoxylate ami 99.4 1.4E-11 3E-16 116.5 20.3 285 163-502 69-382 (385)
314 PLN02724 Molybdenum cofactor s 99.4 1.8E-11 3.8E-16 137.2 24.8 357 99-501 34-487 (805)
315 TIGR01329 cysta_beta_ly_E cyst 99.4 3.9E-12 8.6E-17 130.6 17.6 279 144-502 47-375 (378)
316 PRK08248 O-acetylhomoserine am 99.4 7.5E-12 1.6E-16 130.3 19.8 160 143-354 63-224 (431)
317 PRK06702 O-acetylhomoserine am 99.4 1E-11 2.2E-16 128.4 20.4 234 144-439 61-347 (432)
318 PRK07812 O-acetylhomoserine am 99.4 1.7E-11 3.7E-16 127.5 21.2 161 143-354 68-230 (436)
319 TIGR00474 selA seryl-tRNA(sec) 99.4 2.6E-10 5.6E-15 118.8 29.9 310 117-496 93-453 (454)
320 TIGR03799 NOD_PanD_pyr putativ 99.4 8.4E-11 1.8E-15 124.5 26.5 302 165-495 162-518 (522)
321 cd01494 AAT_I Aspartate aminot 99.4 3.7E-12 8E-17 115.0 13.9 166 147-355 3-170 (170)
322 PRK08064 cystathionine beta-ly 99.4 2.4E-11 5.2E-16 125.3 21.0 231 144-439 54-306 (390)
323 PLN02590 probable tyrosine dec 99.4 2.5E-10 5.4E-15 120.9 28.9 327 144-503 170-533 (539)
324 TIGR03531 selenium_SpcS O-phos 99.4 4.3E-11 9.4E-16 123.7 22.2 304 144-500 105-444 (444)
325 COG1103 Archaea-specific pyrid 99.4 4.9E-11 1.1E-15 110.6 19.6 312 142-502 59-380 (382)
326 PLN02263 serine decarboxylase 99.4 5E-10 1.1E-14 115.7 29.1 295 143-502 132-443 (470)
327 PRK05967 cystathionine beta-ly 99.4 1.8E-11 4E-16 125.3 18.3 237 143-440 63-317 (395)
328 PRK06176 cystathionine gamma-s 99.4 1.6E-11 3.6E-16 125.9 17.9 168 143-363 49-220 (380)
329 PRK13237 tyrosine phenol-lyase 99.4 3.6E-10 7.8E-15 115.8 27.2 348 99-502 44-433 (460)
330 TIGR02618 tyr_phenol_ly tyrosi 99.4 2.4E-10 5.3E-15 116.8 25.8 348 99-502 37-426 (450)
331 TIGR00461 gcvP glycine dehydro 99.4 4E-10 8.7E-15 124.6 29.3 314 143-505 529-870 (939)
332 cd00611 PSAT_like Phosphoserin 99.4 6.6E-11 1.4E-15 120.7 21.8 322 117-499 10-353 (355)
333 PRK08134 O-acetylhomoserine am 99.4 4.4E-11 9.5E-16 124.5 20.5 159 143-354 63-224 (433)
334 cd00615 Orn_deC_like Ornithine 99.3 1.4E-11 3E-16 122.5 14.8 229 142-416 57-293 (294)
335 PF01041 DegT_DnrJ_EryC1: DegT 99.3 6.7E-10 1.5E-14 113.7 26.8 311 119-497 5-363 (363)
336 PRK07671 cystathionine beta-ly 99.3 4.3E-11 9.3E-16 122.8 17.7 234 143-438 49-301 (377)
337 PRK05939 hypothetical protein; 99.3 1.1E-10 2.3E-15 120.5 20.4 158 143-355 46-207 (397)
338 COG1003 GcvP Glycine cleavage 99.3 2.2E-10 4.8E-15 113.2 20.8 316 142-505 107-450 (496)
339 PRK08114 cystathionine beta-ly 99.3 6.8E-11 1.5E-15 121.0 16.7 237 143-440 61-317 (395)
340 COG0399 WecE Predicted pyridox 99.3 1.8E-09 3.8E-14 108.6 25.1 314 119-502 15-373 (374)
341 PF01053 Cys_Met_Meta_PP: Cys/ 99.3 1.2E-10 2.5E-15 119.0 16.9 235 143-441 54-312 (386)
342 PRK05613 O-acetylhomoserine am 99.3 2.5E-10 5.4E-15 118.8 19.4 161 143-354 68-230 (437)
343 KOG0633 Histidinol phosphate a 99.3 6.5E-10 1.4E-14 102.7 19.6 275 161-499 85-374 (375)
344 TIGR02617 tnaA_trp_ase tryptop 99.3 3.9E-09 8.4E-14 107.0 26.6 354 100-502 41-441 (467)
345 COG2873 MET17 O-acetylhomoseri 99.2 1.1E-10 2.3E-15 113.4 12.0 194 112-362 33-230 (426)
346 PRK06434 cystathionine gamma-l 99.2 9.1E-10 2E-14 112.7 16.9 233 143-439 63-308 (384)
347 KOG0634 Aromatic amino acid am 99.2 6E-08 1.3E-12 96.2 28.2 312 144-503 100-467 (472)
348 PLN02452 phosphoserine transam 99.1 7.9E-09 1.7E-13 105.1 22.7 331 102-502 8-363 (365)
349 COG0076 GadB Glutamate decarbo 99.1 5.1E-09 1.1E-13 109.1 20.6 289 117-439 74-380 (460)
350 TIGR01365 serC_2 phosphoserine 99.1 1.9E-08 4.1E-13 102.4 21.6 301 144-501 39-372 (374)
351 PLN02271 serine hydroxymethylt 99.1 4.5E-08 9.7E-13 102.2 23.7 281 165-501 218-539 (586)
352 COG3844 Kynureninase [Amino ac 99.0 2.5E-07 5.4E-12 88.7 25.8 344 94-504 26-404 (407)
353 PF01212 Beta_elim_lyase: Beta 99.0 6.3E-10 1.4E-14 109.4 8.7 247 117-418 7-270 (290)
354 COG0112 GlyA Glycine/serine hy 99.0 3.4E-07 7.4E-12 90.3 26.2 330 117-512 38-407 (413)
355 PLN02414 glycine dehydrogenase 99.0 1.3E-07 2.9E-12 106.2 26.1 319 112-498 111-465 (993)
356 PRK12462 phosphoserine aminotr 99.0 8.9E-08 1.9E-12 96.6 21.8 318 118-501 16-361 (364)
357 KOG0053 Cystathionine beta-lya 99.0 4E-08 8.7E-13 98.3 18.1 191 144-393 77-271 (409)
358 COG0626 MetC Cystathionine bet 98.9 3.8E-08 8.2E-13 99.7 17.1 239 143-440 62-319 (396)
359 PRK05367 glycine dehydrogenase 98.9 4E-07 8.7E-12 102.8 25.6 285 144-497 121-437 (954)
360 PRK15029 arginine decarboxylas 98.9 6.9E-07 1.5E-11 97.9 25.5 231 144-418 205-464 (755)
361 PF00282 Pyridoxal_deC: Pyrido 98.9 1.3E-07 2.7E-12 96.9 18.0 245 144-418 79-354 (373)
362 PF00464 SHMT: Serine hydroxym 98.8 1.8E-07 4E-12 95.0 18.5 207 256-495 157-398 (399)
363 PF01276 OKR_DC_1: Orn/Lys/Arg 98.8 1.1E-07 2.3E-12 97.2 14.1 230 142-418 64-317 (417)
364 PF12897 Aminotran_MocR: Alani 98.8 6.7E-06 1.5E-10 81.3 25.3 305 143-503 68-416 (425)
365 COG3033 TnaA Tryptophanase [Am 98.7 9.4E-06 2E-10 79.0 24.7 320 144-502 79-444 (471)
366 PRK13578 ornithine decarboxyla 98.7 3.3E-06 7.2E-11 91.7 23.2 314 142-501 172-564 (720)
367 COG1448 TyrB Aspartate/tyrosin 98.7 2.8E-06 6.1E-11 83.7 19.5 295 145-499 70-395 (396)
368 KOG2040 Glycine dehydrogenase 98.6 1.7E-06 3.8E-11 89.5 18.0 316 142-504 580-920 (1001)
369 PRK15399 lysine decarboxylase 98.6 1.3E-05 2.8E-10 87.1 24.6 311 143-500 194-557 (713)
370 PRK15400 lysine decarboxylase 98.6 8.4E-06 1.8E-10 88.6 21.5 304 143-499 194-556 (714)
371 KOG0258 Alanine aminotransfera 98.5 3.1E-05 6.7E-10 76.2 22.0 337 119-504 89-471 (475)
372 TIGR03811 tyr_de_CO2_Ent tyros 98.5 0.00024 5.3E-09 76.6 29.4 157 257-418 262-475 (608)
373 COG1921 SelA Selenocysteine sy 98.5 1E-05 2.2E-10 81.0 17.4 230 112-398 32-272 (395)
374 KOG3846 L-kynurenine hydrolase 98.3 7.9E-05 1.7E-09 71.1 18.5 343 112-504 74-463 (465)
375 COG0403 GcvP Glycine cleavage 98.3 0.00018 3.9E-09 72.0 21.4 333 104-499 75-447 (450)
376 KOG1383 Glutamate decarboxylas 98.2 0.00018 4E-09 72.6 20.8 355 96-505 75-449 (491)
377 TIGR00461 gcvP glycine dehydro 98.2 0.00022 4.7E-09 79.9 23.5 202 271-497 194-426 (939)
378 PF03841 SelA: L-seryl-tRNA se 98.1 3.7E-06 8E-11 83.4 6.6 231 112-396 11-260 (367)
379 PF02347 GDC-P: Glycine cleava 98.1 0.00013 2.8E-09 74.9 17.0 199 270-496 196-429 (429)
380 KOG0629 Glutamate decarboxylas 98.1 6.7E-05 1.4E-09 74.7 14.2 318 148-499 145-506 (510)
381 PF05889 SLA_LP_auto_ag: Solub 97.9 0.00086 1.9E-08 67.4 18.8 220 257-501 141-389 (389)
382 COG1932 SerC Phosphoserine ami 97.9 0.0043 9.3E-08 61.4 21.8 201 272-502 145-363 (365)
383 COG1982 LdcC Arginine/lysine/o 97.9 0.0041 8.8E-08 65.5 22.7 162 142-344 68-236 (557)
384 PRK12566 glycine dehydrogenase 97.7 0.0048 1E-07 69.1 21.1 197 270-497 207-439 (954)
385 PF06838 Met_gamma_lyase: Meth 97.6 0.0045 9.7E-08 61.3 18.0 213 117-365 25-248 (403)
386 KOG0628 Aromatic-L-amino-acid/ 97.2 0.14 3E-06 52.3 22.4 222 258-506 220-475 (511)
387 PF04864 Alliinase_C: Allinase 96.7 0.4 8.8E-06 47.5 20.7 282 144-498 43-361 (363)
388 KOG2467 Glycine/serine hydroxy 96.7 0.071 1.5E-06 52.7 15.2 190 294-501 206-425 (477)
389 KOG1411 Aspartate aminotransfe 95.7 0.66 1.4E-05 45.8 16.2 133 280-418 207-359 (427)
390 KOG1412 Aspartate aminotransfe 94.6 1 2.3E-05 43.9 13.5 195 281-503 188-406 (410)
391 PLN02994 1-aminocyclopropane-1 93.8 0.32 6.9E-06 43.1 8.1 59 140-206 92-153 (153)
392 KOG3843 Predicted serine hydro 92.8 0.9 1.9E-05 43.1 9.5 55 255-314 141-196 (432)
393 COG4100 Cystathionine beta-lya 91.1 3.8 8.3E-05 39.9 11.8 98 257-363 155-257 (416)
394 KOG2040 Glycine dehydrogenase 85.6 49 0.0011 36.0 16.5 81 399-497 395-478 (1001)
395 PF07131 DUF1382: Protein of u 52.0 70 0.0015 23.1 5.7 33 476-508 24-56 (61)
396 PF13481 AAA_25: AAA domain; P 47.7 36 0.00078 30.8 5.2 52 257-310 129-184 (193)
397 COG0648 Nfo Endonuclease IV [D 47.3 89 0.0019 30.6 7.8 61 251-315 118-179 (280)
398 cd01821 Rhamnogalacturan_acety 46.8 55 0.0012 29.8 6.3 52 258-309 94-150 (198)
399 COG1105 FruK Fructose-1-phosph 41.5 89 0.0019 31.1 7.0 35 275-313 133-167 (310)
400 smart00642 Aamy Alpha-amylase 40.1 74 0.0016 28.4 5.8 47 271-317 32-95 (166)
401 KOG2433 Uncharacterized conser 37.3 1.2E+02 0.0027 30.9 7.1 64 117-186 434-499 (577)
402 PF13167 GTP-bdg_N: GTP-bindin 35.2 2.1E+02 0.0046 23.0 7.0 58 257-315 10-68 (95)
403 COG0742 N6-adenine-specific me 34.8 1.8E+02 0.0039 26.6 7.3 18 96-115 41-58 (187)
404 cd04920 ACT_AKiii-DAPDC_2 ACT 31.0 1.4E+02 0.003 21.6 5.0 45 454-500 16-61 (63)
405 COG0108 RibB 3,4-dihydroxy-2-b 29.4 86 0.0019 28.9 4.3 35 270-309 155-189 (203)
406 COG0352 ThiE Thiamine monophos 29.3 49 0.0011 31.0 2.8 95 258-363 25-121 (211)
407 COG1435 Tdk Thymidine kinase [ 29.0 4.7E+02 0.01 24.2 9.6 34 272-311 83-116 (201)
408 COG1349 GlpR Transcriptional r 28.2 5.4E+02 0.012 24.7 11.2 50 270-321 165-215 (253)
409 cd01822 Lysophospholipase_L1_l 26.3 1.2E+02 0.0027 26.5 5.0 19 291-309 121-139 (177)
410 cd01834 SGNH_hydrolase_like_2 26.2 1.5E+02 0.0033 26.2 5.7 52 258-309 89-151 (191)
411 PF12138 Spherulin4: Spherulat 25.9 1.7E+02 0.0037 28.2 6.0 51 258-309 19-71 (253)
412 cd04915 ACT_AK-Ectoine_2 ACT d 25.9 1.8E+02 0.004 21.2 5.0 45 454-500 17-64 (66)
413 cd04937 ACT_AKi-DapG-BS_2 ACT 25.7 2.1E+02 0.0044 20.6 5.2 45 454-500 17-62 (64)
414 TIGR00162 conserved hypothetic 25.4 4E+02 0.0086 24.4 8.1 16 292-307 34-49 (188)
415 KOG3974 Predicted sugar kinase 23.7 92 0.002 30.0 3.5 47 258-312 93-139 (306)
416 cd04823 ALAD_PBGS_aspartate_ri 22.5 3E+02 0.0065 27.4 6.9 43 292-334 94-138 (320)
417 PF02677 DUF208: Uncharacteriz 22.3 2E+02 0.0042 26.1 5.2 37 270-312 23-62 (176)
418 cd00984 DnaB_C DnaB helicase C 22.0 1.6E+02 0.0034 27.7 5.0 40 271-310 123-168 (242)
419 PF07905 PucR: Purine cataboli 21.6 1.6E+02 0.0035 24.6 4.5 43 260-309 61-103 (123)
420 TIGR03772 anch_rpt_subst ancho 21.3 3.8E+02 0.0083 28.5 8.0 43 258-309 407-449 (479)
421 smart00545 JmjN Small domain f 21.2 1.1E+02 0.0024 20.5 2.6 21 290-310 15-35 (42)
422 COG0296 GlgB 1,4-alpha-glucan 21.2 1.1E+02 0.0023 33.7 3.9 33 290-322 212-244 (628)
423 cd01840 SGNH_hydrolase_yrhL_li 20.9 2.2E+02 0.0049 24.5 5.4 47 258-309 67-114 (150)
424 KOG0352 ATP-dependent DNA heli 20.9 2.4E+02 0.0052 29.4 6.0 57 270-340 112-169 (641)
425 cd01018 ZntC Metal binding pro 20.7 5.4E+02 0.012 24.7 8.6 30 269-309 215-244 (266)
426 PRK05409 hypothetical protein; 20.7 1.1E+02 0.0024 30.0 3.6 32 282-313 66-97 (281)
427 cd01017 AdcA Metal binding pro 20.5 2.6E+02 0.0056 27.2 6.3 125 146-309 122-247 (282)
428 cd07571 ALP_N-acyl_transferase 20.3 2.9E+02 0.0064 26.6 6.6 37 274-310 41-77 (270)
429 PRK13384 delta-aminolevulinic 20.3 2.5E+02 0.0055 27.9 5.9 57 270-326 73-135 (322)
430 cd01533 4RHOD_Repeat_2 Member 20.1 2.6E+02 0.0056 22.5 5.3 54 147-208 52-106 (109)
431 cd01393 recA_like RecA is a b 20.1 2.9E+02 0.0064 25.5 6.4 44 270-313 113-168 (226)
No 1
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=100.00 E-value=1.6e-92 Score=743.05 Aligned_cols=503 Identities=85% Similarity=1.354 Sum_probs=456.4
Q ss_pred HHHHHHHHhhHHHhhhhhhccccccccccccccccccccccccccccccccccccccccCccccCCccccccCCCCCCeE
Q 010250 6 MVTSKLLQSSLKSQIGSFTKHFSASKSLSENLYQIPLLARFYGTDASSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLV 85 (514)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~ 85 (514)
|+++++++|..+.+..|++||..++.++ ++.+.|+++++.+.+......+.++.|.+|+||+..+....+.|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~ 74 (504)
T PLN02760 1 MIARNLLRSSARSTQVNLLKHYAATASL------APASARIFSTEASLQKEDSEENGFKGHDMLAPFTAGWQSTDLEPLV 74 (504)
T ss_pred CchhhhhhhchhhhhHHHHHHHHHhhcc------chHHHHHhccCCCccccchhhhhhccCCcccCcccccccccCCCce
Confidence 6789999999999999999999999988 5778999999999999999999999999999999998876678999
Q ss_pred EEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeE
Q 010250 86 IEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKV 165 (514)
Q Consensus 86 ~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v 165 (514)
+++++|+|+||+|||+||||.+|+|+++|||+||+|++|+.+|++++.+.+.+++.++++..+|+++|++.+++.++++|
T Consensus 75 i~~~~G~~l~D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v 154 (504)
T PLN02760 75 IEKSEGSYVYDINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARKMGKV 154 (504)
T ss_pred EEeeeeeEEEECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCCCCCEE
Confidence 99999999999999999999999999999999999999999999998766555556788999999999998765567899
Q ss_pred EEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCC
Q 010250 166 FFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHP 245 (514)
Q Consensus 166 ~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (514)
+|+|||+|||++|||+||.|+..+++++|.+||.++++|||++++++++++.+.++..|+++.+.+.++++|+.|+++.+
T Consensus 155 ~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 234 (504)
T PLN02760 155 FFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLP 234 (504)
T ss_pred EEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCC
Confidence 99999999999999999999877787888999999999999999999999988777778877777889999999998877
Q ss_pred CCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce
Q 010250 246 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG 325 (514)
Q Consensus 246 ~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~ 325 (514)
....+.+...+.++|++++.+..++++|+||+||++|++|+++||++||++|+++|++||++||+|||||||||+|++|+
T Consensus 235 ~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a 314 (504)
T PLN02760 235 GETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFG 314 (504)
T ss_pred CCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhH
Confidence 77767777777889999887666678999999999999999999999999999999999999999999999999999999
Q ss_pred ecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHH
Q 010250 326 CDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVN 405 (514)
Q Consensus 326 ~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~ 405 (514)
++++|++|||+||||+|+||++|+|++++++++++.+.......+.+.|++||++||++|++++++|++++++++.++++
T Consensus 315 ~e~~gv~PDivtlgK~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~~l~~~~~ 394 (504)
T PLN02760 315 CDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKERNIPEHVN 394 (504)
T ss_pred HHhcCCCCcEEEecccccCCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 99999999999999999999889999999999999986433223456799999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCC
Q 010250 406 KIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMS 485 (514)
Q Consensus 406 ~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t 485 (514)
+++++|+++|+++.+++++.+++|.|+|++++|.++.....+++.++.....+.+.|+++|+++.+.++.+||+||+++|
T Consensus 395 ~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~lrl~Ppl~it 474 (504)
T PLN02760 395 KIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAGDNIMMSPPLIIT 474 (504)
T ss_pred HHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEecCCEEEEECCCCCC
Confidence 99999999999986688999999999999999976554444444444557778899999999999888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 010250 486 PEEVDELISKYGKALKATEERVKELKSQQ 514 (514)
Q Consensus 486 ~e~id~~~~~l~~~l~~~~~~~~~~~~~~ 514 (514)
++|||+++++|++++++++++++++|+||
T Consensus 475 ~eeid~~~~~l~~al~~~~~~~~~~~~~~ 503 (504)
T PLN02760 475 PEEVDELISIYGKALKATEERVAELKSQK 503 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 99999999999999999999999999975
No 2
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=2.7e-89 Score=685.36 Aligned_cols=435 Identities=41% Similarity=0.740 Sum_probs=402.0
Q ss_pred cCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCC
Q 010250 64 KGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTT 143 (514)
Q Consensus 64 ~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~ 143 (514)
.....|+||++....... |.+|++++|.|+||.|||+|||..||+||+++||+||+|.+|+.+|++++++++.+ +.++
T Consensus 9 d~~~~whP~t~~~~~~~~-~~~i~~aeG~yl~d~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~-~~t~ 86 (449)
T COG0161 9 DLSHLWHPFTQMRDPLAE-PRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFG-GFTH 86 (449)
T ss_pred hhhheecccccccccccc-ceeeeecceeEEEeCCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhc-ccCC
Confidence 444579999987665333 89999999999999999999999999999999999999999999999999987643 4567
Q ss_pred chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc-C
Q 010250 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH-Q 222 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~-~ 222 (514)
.+..+|+++|+++.++.++++|||++|||||||.|+|+|++|++.+|++.|++||+...+|||.|++++|+++.+..+ .
T Consensus 87 ~Pa~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~ 166 (449)
T COG0161 87 EPAIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHA 166 (449)
T ss_pred chHHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhh
Confidence 779999999999986556999999999999999999999999999999999999999999999999999999955544 6
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCC-CCcccCChhHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGA-GGVIPPPATYFEKVQAVV 301 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~-~G~~~p~~~~L~~l~~l~ 301 (514)
.+..+.+.+.++++|+.|+....++..++| ..++++||+++.+.+++++||||+||+.+. ||+++||++||++++++|
T Consensus 167 ~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~-~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC 245 (449)
T COG0161 167 FYDPLLPEVLHLPAPYAYRRGFFGEGDEEF-AEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREIC 245 (449)
T ss_pred hccccccCceecCCCcccccCCCCCChHHH-HHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHH
Confidence 667778888999999999988888888888 788999999999999999999999999877 999999999999999999
Q ss_pred HhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCc
Q 010250 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 381 (514)
Q Consensus 302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~ 381 (514)
++||||||+|||.|||||||++|+++++|++|||+|++|+|+|||+|+|++++++++.+.+.... .+.|.||+||++|
T Consensus 246 ~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~--~~~f~HG~TYsgh 323 (449)
T COG0161 246 DKYGILLIADEVATGFGRTGKMFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGD--AGAFMHGHTYSGN 323 (449)
T ss_pred HHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeeeecccccccchhhHhHhhhHHHHHHHhccc--CCeeccCCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999998653 5789999999999
Q ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhh-ccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHH
Q 010250 382 PVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA-FSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGA 460 (514)
Q Consensus 382 pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~-l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 460 (514)
|++||+|+++|++++++++.+++++.+.+|.++|++ +.++|.+++||+.|++.++++..+..++.+| +......+..
T Consensus 324 PlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f--~~~~~~~~~~ 401 (449)
T COG0161 324 PLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPF--EARVGARVRA 401 (449)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccch--hhhHHHHHHH
Confidence 999999999999999999999999999999999998 5778999999999999999999988887777 5567888999
Q ss_pred HHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 461 QCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 461 ~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
.++++|++++|.|+.|-++||+++|++|||++++++.++++....
T Consensus 402 ~~~e~Gl~iRp~g~~i~~~PPliit~~eid~l~~~l~~al~~~~~ 446 (449)
T COG0161 402 AALERGLLIRPLGDVIYLMPPLIITREEIDELVDALREALDETLA 446 (449)
T ss_pred HHHHCCeEEeecCCEEEEcCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999987654
No 3
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-87 Score=658.51 Aligned_cols=376 Identities=34% Similarity=0.606 Sum_probs=343.6
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++|+|+|+||.+||+||||.+|+++++|||+||+|++|+++|++++.+.+..| .+++..+|+++|++..+ .
T Consensus 24 ~~~~~~~G~G~~v~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~--~~~~~~~la~~L~~~s~--~ 99 (404)
T COG4992 24 LPVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLF--YNEPQAELAEKLVELSP--F 99 (404)
T ss_pred CceeEEeccccEEECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhccccc--CChHHHHHHHHHHhhCc--c
Confidence 7799999999999999999999999999999999999999999999999987765433 57888999999999863 5
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
.++|+|+|||+||||+|+|+||.|.. .++|.+||.|.++|||+|++++++++.+.|++.|.+..|.+.++|+-+
T Consensus 100 ~d~vff~NSGaEA~EaAiKlARk~~~---~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnD--- 173 (404)
T COG4992 100 ADRVFFCNSGAEANEAALKLARKYTG---DPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFND--- 173 (404)
T ss_pred ccEEEEcCCcHHHHHHHHHHHHHHcC---CCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCC---
Confidence 89999999999999999999998853 466889999999999999999999999999999997777777666532
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G 321 (514)
++.+++++. +++++||+|||||+||+++|+++||+++++||++||+|||+||||||+||||
T Consensus 174 ---------------i~al~~ai~----~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTG 234 (404)
T COG4992 174 ---------------IEALEAAID----EDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTG 234 (404)
T ss_pred ---------------HHHHHHHhc----cCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccc
Confidence 577888776 4899999999999999999999999999999999999999999999999999
Q ss_pred ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV 401 (514)
Q Consensus 322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~ 401 (514)
++|+++|+|+.|||+|++|+|||| +|||++++++.+.+.+. +..||+||+|||++|+++.++|+++.++++.
T Consensus 235 k~fA~e~~gV~PDI~tlaK~LgGG-~PigA~la~~~~~~~~~-------~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll 306 (404)
T COG4992 235 KLFAYEHYGVEPDILTLAKALGGG-FPIGAMLATEEIASAFT-------PGDHGSTFGGNPLACAVALAVLEVLLEEGLL 306 (404)
T ss_pred hHHHHHHhCCCCCEEEeeccccCC-ccceeeEEchhhhhcCC-------CCcccCCCCcCHHHHHHHHHHHHHHcchhHH
Confidence 999999999999999999999999 89999999977777765 4589999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEe
Q 010250 402 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMS 479 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~ 479 (514)
+++++.+++|+++|+++ .+++++.++||+|+|++++|..+. .+..+...|.++|+++.+.+ +.|||.
T Consensus 307 ~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~-----------~a~~~~~~~~~~gvL~~~a~~~ViR~~ 375 (404)
T COG4992 307 ENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPY-----------RARDIVRALREEGVLVLPAGPNVIRFL 375 (404)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcc-----------cHHHHHHHHHHCCeEEecCCCCeEEec
Confidence 99999999999999998 678899999999999999998753 14568899999999998765 579999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 480 PPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 480 p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
||+++|+||||+++++|+++++....
T Consensus 376 PpL~i~~eei~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 376 PPLVITEEEIDEALDALERALAAASA 401 (404)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999987654
No 4
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-84 Score=656.64 Aligned_cols=402 Identities=34% Similarity=0.609 Sum_probs=358.5
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
+|+++++++|+|+||+|||+||||.+|.++.++|||||+|++|+.+|++++.+.+..+. +.++..+++|+|.+.++..+
T Consensus 38 ~p~~~~ra~G~~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~-~~e~~v~~ae~L~~~~p~~~ 116 (447)
T COG0160 38 FPLVIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDL-YYEPYVELAEKLTALAPGSG 116 (447)
T ss_pred CcceEEecccCEEEeCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCcc-cchhHHHHHHHHHHhCCccc
Confidence 89999999999999999999999999999999999999999999999999876544332 33888999999999987557
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc-CCCCCCCCcccccCCCCcc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH-QKFDLPAPFVLHTDCPHYW 240 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~-~~~~~~~~~~~~~~~~~~~ 240 (514)
.++++|+|||+||||+|+|+||.| ++|..||+|.++|||+|.+++++|+....+ .+|++..+.+.++|+|++|
T Consensus 117 ~~~~~f~~sGaeA~E~AiKiAr~~------Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~y 190 (447)
T COG0160 117 LKKVFFGNSGAEAVEAAIKIARAY------TGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPY 190 (447)
T ss_pred CCeEEecCCcHHHHHHHHHHHHHH------hCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccc
Confidence 899999999999999999999988 678999999999999999999999986554 5677777779999999999
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHH--hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLILK--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 318 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~~--~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g 318 (514)
|++..... ++......+.+++.+.+ ..++++|+||+||+||+||.++||++||++|+++|+|||++||+||||+|||
T Consensus 191 r~p~~~~~-~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~G 269 (447)
T COG0160 191 RCPFGIGG-EECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFG 269 (447)
T ss_pred cCcccCch-hhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 98765433 44555556777775544 3567899999999999999999999999999999999999999999999999
Q ss_pred cccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc
Q 010250 319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER 398 (514)
Q Consensus 319 r~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~ 398 (514)
|||++|+++++||.|||+|+||+|+|| +|+|++++++++++ .. +..|++||++||++|++++++|++++++
T Consensus 270 RTG~~fa~E~~gv~PDivt~aK~ig~G-~Pl~avv~r~ei~~-~~-------~g~~~~Tf~GNpva~Aaa~AvL~vie~e 340 (447)
T COG0160 270 RTGKMFAFEHFGVEPDIVTLAKSLGGG-LPLSAVVGRAEIMD-WP-------PGGHGGTFGGNPVACAAALAVLDVIEEE 340 (447)
T ss_pred ccccchhhhhcCCCCCEEEecccccCC-CceeEEeccHHhcc-cC-------CcccCCCCCcCHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999998 89999999999999 33 3378899999999999999999999999
Q ss_pred cHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---C
Q 010250 399 NIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---D 474 (514)
Q Consensus 399 ~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~ 474 (514)
++.+++.+++++++++|.++ .++|.+++|||.|+|++++|..+..+.+| +......++..|+++|+++..+| +
T Consensus 341 ~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p---~~~~~~~i~~~~~~~Glil~~~G~~~n 417 (447)
T COG0160 341 NLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEP---DAELAAKIVARAFERGLLLLTCGPHGN 417 (447)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCC---CHHHHHHHHHHHHHcCCEEeccCCCCc
Confidence 99999999999999999999 68999999999999999999876544432 22357789999999999988766 7
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 475 NIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 475 ~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
.|||.||+++|+|++|+++++|++++.++
T Consensus 418 viRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 418 VLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred EEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 89999999999999999999999999764
No 5
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=5.2e-84 Score=617.76 Aligned_cols=400 Identities=41% Similarity=0.711 Sum_probs=372.1
Q ss_pred CCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC
Q 010250 79 TDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT 158 (514)
Q Consensus 79 ~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~ 158 (514)
....|++|.+++|+|++|.+||+|||+.+|.+++++|||||+|++|+.+|+.++ +|++++..+++..+||++|++.++
T Consensus 29 ~~~~Pl~Iv~~~~~ylyDe~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l--~H~t~~~~~~pi~~~Ae~L~s~~P 106 (442)
T KOG1404|consen 29 YYKKPLVIVRGEGQYLYDEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKL--YHTTSGYLNPPIHDLAEALVSKLP 106 (442)
T ss_pred cccCCceEEecceEEEEcCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhh--EEeeccccCCcHHHHHHHHHHhCC
Confidence 345899999999999999999999999999999999999999999999999665 455666788999999999999985
Q ss_pred cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC
Q 010250 159 ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH 238 (514)
Q Consensus 159 ~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 238 (514)
.+++.++|+|||+||||+|+++||.| +++-+||.+.++|||.|..++++++.+.++..+....+++.+..+|+
T Consensus 107 -~~l~~vfF~nsGsEANelal~mar~Y------t~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pd 179 (442)
T KOG1404|consen 107 -GDLKVVFFVNSGSEANELALKMARLY------TGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPD 179 (442)
T ss_pred -CCceEEEEecCCchHHHHHHHHHHHh------cCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCC
Confidence 57899999999999999999999999 56779999999999999999999999999988887778999999999
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc
Q 010250 239 YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 318 (514)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g 318 (514)
+||..+++++.+++.....+++++++....++++|++|+|||||.||++.+|++||+++.++|+|+|.++|+||||||||
T Consensus 180 p~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfG 259 (442)
T KOG1404|consen 180 PYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFG 259 (442)
T ss_pred cccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccc
Confidence 99999999999999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred cccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc
Q 010250 319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER 398 (514)
Q Consensus 319 r~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~ 398 (514)
|||.+|+++.+|+.|||+|++|+||+| +|+|+++.++||++.+.+. ..|..||++||++|++++++|++++++
T Consensus 260 RtG~~wgfe~h~v~PDIvTmAKgiGnG-~Pl~AVvtt~EIa~v~~~~------~~~fnTyggnP~a~avg~aVL~Vikee 332 (442)
T KOG1404|consen 260 RTGHMWGFESHGVVPDIVTMAKGIGNG-FPLGAVVTTPEIADVLNQK------SSHFNTYGGNPVACAVGLAVLKVIKEE 332 (442)
T ss_pred cccccccccccCCCccHHHHHhhccCC-CcceeeecCHHHHHHHHhc------cccccccCCCchhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 8999999999999999863 237899999999999999999999999
Q ss_pred cHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---CC
Q 010250 399 NIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GD 474 (514)
Q Consensus 399 ~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~ 474 (514)
++.++..+.+.+|+++|.++ .++|++++|||+|+|+++++.+++. ++++.++.....+.+.|++.|+++..+ |+
T Consensus 333 ~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~--~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~ 410 (442)
T KOG1404|consen 333 NLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKS--EPKPPATAEGAVIGEQCKELGVLVGKGGIHGN 410 (442)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccC--CCCCcchHHHHHHHHHHHHhCeeeecccccce
Confidence 99999999999999999999 6799999999999999999998764 455667777888999999999999754 57
Q ss_pred EEEEeCCCCCCHHHHHHHHHHH
Q 010250 475 NIMMSPPFIMSPEEVDELISKY 496 (514)
Q Consensus 475 ~iRi~p~~~~t~e~id~~~~~l 496 (514)
.+||+||+++|+|||+.+++.+
T Consensus 411 vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 411 VFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred EEEecCCeeccHHHHHHHHHHH
Confidence 8999999999999998887766
No 6
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-83 Score=599.65 Aligned_cols=401 Identities=31% Similarity=0.511 Sum_probs=356.8
Q ss_pred cccccccccccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHH
Q 010250 50 DASSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQL 129 (514)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l 129 (514)
..+++...+.+++|.+||| +| +|+++++++|+++||++|++||||.|++++++.|||||.|++|+++|.
T Consensus 20 ~~aS~~~~~~E~k~~ahny-hp----------Lpvvf~ka~g~~vwD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~ 88 (427)
T KOG1402|consen 20 TTASQQIMERENKYGAHNY-HP----------LPVVFSKAKGSRVWDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQA 88 (427)
T ss_pred ccchhhhhchhhhcccccC-Cc----------CceEEEecCCcEEECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHH
Confidence 3444557778999999996 67 999999999999999999999999999999999999999999999999
Q ss_pred hcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHH--HHHhhcCCCCccEEEEEecCCccc
Q 010250 130 NTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVW--YYNNALGRPNKKKFIARQKSYHGS 207 (514)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~--~~~~~~~~~~~~~ii~~~~~yHG~ 207 (514)
+++...++.+ +++...++++.+.++| +.++|+.+|+|.||+|.|+|+|| .|..+..+..+.+|++..++|||+
T Consensus 89 ~kLtlssraf--Ynd~~~~f~~~vt~lf---~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGr 163 (427)
T KOG1402|consen 89 DKLTLSSRAF--YNDVLGEFAEYVTKLF---GYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGR 163 (427)
T ss_pred hHhhhhhHHH--hhhhHHHHHHHHHHhc---CcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCc
Confidence 9987665432 4578899999999998 56899999999999999999995 676666666788999999999999
Q ss_pred ceeeeecCCCccccCCCCCCCCcc-cccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCc
Q 010250 208 TLIAASLSGLPALHQKFDLPAPFV-LHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGV 286 (514)
Q Consensus 208 t~~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~ 286 (514)
|++++++|+++..+.+|+++.|++ ..+++- ++++|+..+.. +++++||+||+||++|+
T Consensus 164 T~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~------------------d~eale~~l~~---~~vaaFivEPIQGEaGV 222 (427)
T KOG1402|consen 164 TLGAISLSTDPDSWDGFGPFLPGVVDKVPYG------------------DAEALEVALKS---PNVAAFIVEPIQGEAGV 222 (427)
T ss_pred eeeeEEecCCcchhhccCCCCCCcceeeccC------------------CHHHHHHHhcC---CCeeEEEeeccccccce
Confidence 999999999998889999888873 333332 25777777763 68999999999999999
Q ss_pred ccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhcc
Q 010250 287 IPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQS 366 (514)
Q Consensus 287 ~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~ 366 (514)
++||++||+++++||++|++++|+||||||+||||+++++++.++.||++.|||+|+||.+|++++++++++|..+.
T Consensus 223 vvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDivilgKalSGG~~Pvsavl~~~~im~~~~--- 299 (427)
T KOG1402|consen 223 VVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVILGKALSGGVYPVSAVLADDDIMLNIK--- 299 (427)
T ss_pred EeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCCeEEEeccccCCeeeeEEEEecHHHHhccC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCC-ceeEEEeeeeeEEEEEccCCCC
Q 010250 367 NTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSP 444 (514)
Q Consensus 367 ~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~v~g~g~~~~i~~~~~~~~ 444 (514)
+..||+||++||++|++++|+|+++.++++.++..+++..|+.+|+++ .+.| ++.+|||+|++.++.+...+..
T Consensus 300 ----pgeHgsTyggNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~~ 375 (427)
T KOG1402|consen 300 ----PGEHGSTYGGNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKTS 375 (427)
T ss_pred ----CCccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEecccccc
Confidence 447999999999999999999999999999999999999999999999 4554 6789999999999999865433
Q ss_pred CCCCCCccchHHHHHHHHHHCCcEEEe-eCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 445 NEPFPPEWGIGAYFGAQCEKHGMLVRV-SGDNIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 445 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~-~g~~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
.. + +..++..|.++|++..| +++.|||+||+.++++|+++.++++++++.
T Consensus 376 ~~---~----aw~~cl~lk~~g~LAkptH~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 376 GQ---D----AWDVCLALKENGLLAKPTHGNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred ch---h----HHHHHHcccccccccCCCCCCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 21 2 44567888999999987 467899999999999999999999998864
No 7
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-81 Score=655.08 Aligned_cols=439 Identities=42% Similarity=0.805 Sum_probs=378.3
Q ss_pred cccCCccccccCC--CCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCc
Q 010250 67 DMLAPFTAGWQST--DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTK 144 (514)
Q Consensus 67 ~~~~p~~~~~~~~--~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~ 144 (514)
..|+|+++..... ...|+++++|+|+|+||.|||+||||.+++|+++|||+||+|++|+.+|++++.+.+.....+++
T Consensus 15 ~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~ 94 (461)
T PRK07482 15 HFFHPSTHLGDHARGELPGRIVEGGEGIRITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHGTE 94 (461)
T ss_pred hccCCcccccccccccCCCeeEEeeeeeEEEECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccccccCCH
Confidence 3566765432211 12489999999999999999999999999999999999999999999999998655443345788
Q ss_pred hHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCC
Q 010250 145 PSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF 224 (514)
Q Consensus 145 ~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~ 224 (514)
+..+|+++|++.++ .++++|+|++||+||||+|||+||.|+..++.++|++||.++++|||+|.+++++++.+.++..|
T Consensus 95 ~~~~lAe~L~~~~p-~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~ 173 (461)
T PRK07482 95 ASITLSKRIIDRAP-AGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHF 173 (461)
T ss_pred HHHHHHHHHHHhCC-CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhcc
Confidence 89999999999874 35789999999999999999999999877777889999999999999999999999988888888
Q ss_pred CCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 010250 225 DLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY 304 (514)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~ 304 (514)
+++.+.+.+++.|++++.+..+...+.+...+++.+++++.+..++++|+||+||+||++|+++|+++||++|+++|++|
T Consensus 174 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~ 253 (461)
T PRK07482 174 DLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKY 253 (461)
T ss_pred CCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHh
Confidence 87777778888887777655455556677778889999886555678999999999999999999999999999999999
Q ss_pred CCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHH
Q 010250 305 DILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVS 384 (514)
Q Consensus 305 gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~ 384 (514)
|++||+|||+|||||+|++|+++++|++||++|+||+|+||++|+|++++++++++.+.......+.+.|++||++||++
T Consensus 254 giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~ 333 (461)
T PRK07482 254 DILLIADEVVTGFGRLGSMFGSDHYGIEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPIC 333 (461)
T ss_pred CCEEEEeccccCCCcCcchhhHHhcCCCCCEEEEccccccCccccceeeecHHHHHHHhcccccCCccccCCCCCcCHHH
Confidence 99999999999999999999999999999999999999999779999999999999886432223456799999999999
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH
Q 010250 385 CAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE 463 (514)
Q Consensus 385 ~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 463 (514)
|++|+++|++++++++.+++++++++|+++|+++ .+++.+.+++|.|+|++++|..+.....++.........+...|+
T Consensus 334 ~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~ 413 (461)
T PRK07482 334 AAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAAL 413 (461)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHH
Confidence 9999999999999999999999999999999987 678999999999999999997544333333222234567889999
Q ss_pred HCCcEEEee--CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250 464 KHGMLVRVS--GDNIMMSPPFIMSPEEVDELISKYGKALKATEER 506 (514)
Q Consensus 464 ~~Gv~~~~~--g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~ 506 (514)
++|+++.+. ++.+||.||+++|++||++++++|+++++++.++
T Consensus 414 ~~Gvl~~~~~~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~~~~ 458 (461)
T PRK07482 414 ERGVIARAMPHGDILGFAPPLVLTRAEADEIVAIAKDAVDEVLGR 458 (461)
T ss_pred HCCcEEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999998653 6789999999999999999999999999877443
No 8
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-80 Score=647.41 Aligned_cols=439 Identities=34% Similarity=0.668 Sum_probs=378.7
Q ss_pred CccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCc
Q 010250 65 GHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTK 144 (514)
Q Consensus 65 ~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~ 144 (514)
....|+||++........|+++++++|+|+||.|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.+.+.+.+++
T Consensus 7 ~~~~w~p~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~ 86 (449)
T PRK07481 7 ARRFWHPMAHPAEMKARPPIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHP 86 (449)
T ss_pred cccccCCcccccccccCCCceEEeccccEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCH
Confidence 34489999987765555789999999999999999999999999999999999999999999999987665433345788
Q ss_pred hHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCC
Q 010250 145 PSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF 224 (514)
Q Consensus 145 ~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~ 224 (514)
...+++++|++.+++.++++|+|++||+||||+|+|+||.|++..+.++|.+||.++++|||+|.+++++++.+.++..|
T Consensus 87 ~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~ 166 (449)
T PRK07481 87 RAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNY 166 (449)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCccccccc
Confidence 89999999999875456789999999999999999999999877777788999999999999999999999887777667
Q ss_pred CCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 010250 225 DLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY 304 (514)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~ 304 (514)
.+..+.+.+++.|+.+++++...+.+.+...+.+.+|+++....++++|+||+||+|+++|+++|+++||++|+++|++|
T Consensus 167 ~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~ 246 (449)
T PRK07481 167 EPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRH 246 (449)
T ss_pred CCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHc
Confidence 66666777777777666654423445555566778888887566678999999999999999999999999999999999
Q ss_pred CCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHH
Q 010250 305 DILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVS 384 (514)
Q Consensus 305 gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~ 384 (514)
|++||+|||||||||+|++|+++++|+.|||+|+||+|+||++|+|++++++++++.+.......+.+.|++||++||++
T Consensus 247 g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~ 326 (449)
T PRK07481 247 GILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVA 326 (449)
T ss_pred CCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEEeecccCCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHH
Confidence 99999999999999999999999999999999999999999889999999999999886432112345799999999999
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH
Q 010250 385 CAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE 463 (514)
Q Consensus 385 ~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 463 (514)
|++++++|++++++++.+++++++++|+++|+++ .+++++.+++|.|+|++++|..+..+..++.........+...|+
T Consensus 327 ~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (449)
T PRK07481 327 CAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVAR 406 (449)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 468999999999999999997543222222212234567888999
Q ss_pred HCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 464 KHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 464 ~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
++|+++.+.++.+||+||+++|++|||+++++|++++.++
T Consensus 407 ~~Gvl~~~~g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 407 ENGVLVRPSGTKIILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred hCCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 9999999888889999999999999999999999999765
No 9
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-80 Score=648.13 Aligned_cols=436 Identities=32% Similarity=0.623 Sum_probs=371.2
Q ss_pred ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250 68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 147 (514)
Q Consensus 68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ 147 (514)
.|+|+++........|+++++++|+|+||+|||+||||.+++|+++|||+||+|++|+.+|++++.+....+...+++..
T Consensus 14 ~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~ 93 (459)
T PRK05965 14 LIHPVASYRGHEARGVTVLASAKGATLTDASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAI 93 (459)
T ss_pred cccccccccccccCCCceEEeeeEeEEEECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHH
Confidence 46676544221123578999999999999999999999999999999999999999999999987665433344678889
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250 148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 227 (514)
Q Consensus 148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~ 227 (514)
+|+++|++.++ .++++|+|++||+||||.|||+||.|+..++.++|.+||.++++|||+|.+++++++.+.++..++++
T Consensus 94 ~lae~L~~~~p-~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~ 172 (459)
T PRK05965 94 RLAAKLAERAP-GSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLP 172 (459)
T ss_pred HHHHHHHhhCC-CCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCC
Confidence 99999999974 46789999999999999999999999877777888999999999999999999999887777777766
Q ss_pred CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCE
Q 010250 228 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 307 (514)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gil 307 (514)
.+.+..+++|..++.+.. .+.+.+...+++++++++....++++|+||+||+|+++|+++||++||++|+++|++||++
T Consensus 173 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gil 251 (459)
T PRK05965 173 LPWQHKIPSPYPYRNPVG-DDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGIL 251 (459)
T ss_pred CCCCEEcCCCcccccccC-CChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 666666777766665432 2334455566788888887665678999999999999999999999999999999999999
Q ss_pred EEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHH
Q 010250 308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV 387 (514)
Q Consensus 308 lI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aa 387 (514)
||+|||+|||||+|++|+++++|++|||+|+||+|+||++|+|++++++++++.+.......+.+.|++||++||++|++
T Consensus 252 lI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aa 331 (459)
T PRK05965 252 FVADEVITGFGRTGPLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAV 331 (459)
T ss_pred EEEechhccCccCchhhhHhhcCCCCCeEEechhhccCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999789999999999999886422112245799999999999999
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCc
Q 010250 388 AIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM 467 (514)
Q Consensus 388 a~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 467 (514)
++++|++++++++.+++++++++|+++|+++.+++.+.++||.|+|++++|..+..+..++.........+...|+++|+
T Consensus 332 a~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gl 411 (459)
T PRK05965 332 GLEVLRLYHEGGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGL 411 (459)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCe
Confidence 99999999999999999999999999999986689999999999999999975433333322222346678899999999
Q ss_pred EEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 468 LVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 468 ~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
++.+.+ +.||+.||+++|++||++++++|++++.++.+
T Consensus 412 l~~~~g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~~~ 450 (459)
T PRK05965 412 VFRAFGDGVLGFAPALCCTEGEFDLIFERTRKTLDDVLA 450 (459)
T ss_pred EEEecCCcEEEEECCCcCCHHHHHHHHHHHHHHHHHHhc
Confidence 999876 56999999999999999999999999987754
No 10
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=4.2e-79 Score=638.08 Aligned_cols=438 Identities=53% Similarity=0.961 Sum_probs=378.9
Q ss_pred ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250 68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 147 (514)
Q Consensus 68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ 147 (514)
.|+|+..........|+++++++|+|+||+|||+||||.+++|+++|||+||+|++|+.+|++++++.+.+...+++...
T Consensus 16 ~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~ 95 (460)
T PRK06105 16 HLHPYTNARRHEEEGPLVIERGEGIYVYDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVI 95 (460)
T ss_pred cccCCcccccccccCCceEEeeeEEEEEECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHH
Confidence 45555432111123689999999999999999999999999999999999999999999999987755443234678889
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250 148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 227 (514)
Q Consensus 148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~ 227 (514)
+++++|++.++ .++++|+|++||+||||+|||+||.|++.++.++|.+||.++++|||++.+++++++.+..++.++++
T Consensus 96 ~lae~L~~~~p-~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~ 174 (460)
T PRK06105 96 DLAEKLVAMAP-VPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLP 174 (460)
T ss_pred HHHHHHHHhCC-CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCC
Confidence 99999999984 45789999999999999999999998877777788999999999999999999999877777778877
Q ss_pred CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCE
Q 010250 228 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 307 (514)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gil 307 (514)
.+.+.++++|+.+++..+.+..+.+...+.+++|+++.+..++++++||+||+|+++|+++|+++||++|+++|++||++
T Consensus 175 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~l 254 (460)
T PRK06105 175 LDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDIL 254 (460)
T ss_pred CCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCe
Confidence 77788889998888766666666677777899999987665678999999999999999999999999999999999999
Q ss_pred EEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHH
Q 010250 308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV 387 (514)
Q Consensus 308 lI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aa 387 (514)
||+|||||||||+|++|+++++++.|||+|+||+|+||++|+|++++++++++.+.......+.+.|++||++||++|++
T Consensus 255 lI~DEv~tG~GRtG~~f~~~~~~v~PDi~~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aa 334 (460)
T PRK06105 255 LVADEVICGFGRTGNMFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAV 334 (460)
T ss_pred EEEeccccCCCcCchhhhHHhcCCCCCeeeeecccccCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999889999999999999886533223455689999999999999
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCc
Q 010250 388 AIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM 467 (514)
Q Consensus 388 a~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 467 (514)
++++|++++++++.+++++++++|+++|+++.+++.+.+++|.|++++++|..+..+..++.........+...|+++|+
T Consensus 335 a~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gv 414 (460)
T PRK06105 335 ALENLAIIEERDLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGV 414 (460)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCe
Confidence 99999999999999999999999999999996689999999999999999975443333332222234568889999999
Q ss_pred EEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250 468 LVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEER 506 (514)
Q Consensus 468 ~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~ 506 (514)
++.+.++.|||+||+++|++|||+++++|+++++++...
T Consensus 415 l~~~~g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~~ 453 (460)
T PRK06105 415 ISRAMGDTLAFCPPLIITAAQVDEMVDRFGRALDDVAAW 453 (460)
T ss_pred EEEecCCEEEEECCCccCHHHHHHHHHHHHHHHHHHHHH
Confidence 999888899999999999999999999999999887653
No 11
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=4.3e-78 Score=629.11 Aligned_cols=433 Identities=43% Similarity=0.789 Sum_probs=367.4
Q ss_pred ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250 68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 147 (514)
Q Consensus 68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ 147 (514)
+|+|+...-......|+++++++|+|+||.|||+||||.+++|+.+|||+||+|++|+.+|++++.+...++...++...
T Consensus 18 ~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~ 97 (456)
T PRK07480 18 HLHPFSDMKALNEKGSRVITRAEGVYLWDSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAI 97 (456)
T ss_pred cccCcccccccccCCCceEEeceeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHH
Confidence 45665433111113578999999999999999999999999999999999999999999999987665443345788899
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250 148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 227 (514)
Q Consensus 148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~ 227 (514)
+|+++|++.++ .++++|+|++||+||||.|+|+||.|+..++.++|.+||.++++|||+|++++++++.+.++..++++
T Consensus 98 ~lae~L~~~~p-~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~ 176 (456)
T PRK07480 98 ELAAKLAEVAP-PGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLP 176 (456)
T ss_pred HHHHHHHHhCC-CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCC
Confidence 99999999974 45789999999999999999999999877777788999999999999999999999876666666655
Q ss_pred CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCE
Q 010250 228 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 307 (514)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gil 307 (514)
.+.+.+++.|.+++... ..+.+++...+.+.+++.+.+..++++++||+||+|+++|+++||++||++|+++|++||++
T Consensus 177 ~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~l 255 (456)
T PRK07480 177 IPGIVHIDQPYWFGEGG-DMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDIL 255 (456)
T ss_pred CCCCeecCCCccccccc-CCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 56677777777766543 22344555555678877776666678999999999999999999999999999999999999
Q ss_pred EEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHH
Q 010250 308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV 387 (514)
Q Consensus 308 lI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aa 387 (514)
||+|||||||||+|++|+++++|++||++||||+|+||++|+|++++++++++.+... .+.+.|++||++||++|++
T Consensus 256 lI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~---~~~~~~~~T~~gnpl~~Aa 332 (456)
T PRK07480 256 LVADEVICGFGRTGEWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIEE---GGEFNHGFTYSGHPVAAAV 332 (456)
T ss_pred EEEechhhCCCcCcchhhhhhcCCCCCeeeeehhhccCCccceEEEEcHHHHHHHhcC---CCCcccCCCCCcCHHHHHH
Confidence 9999999999999999999999999999999999999988999999999999988421 1345789999999999999
Q ss_pred HHHHHHHHhhccHHHHH-HHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250 388 AIEALKIYKERNIVEQV-NKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 466 (514)
Q Consensus 388 a~aal~~~~~~~~~~~~-~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 466 (514)
++++|++++++++.+++ ++++++|+++|+++.+++.+.+++|.|+|++++|.++.....++.........+...|+++|
T Consensus 333 a~a~L~~l~~~~l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 412 (456)
T PRK07480 333 ALANLRILRDEGIVERVRDDTGPYLQKRLRELADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANG 412 (456)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCC
Confidence 99999999999999999 69999999999998678999999999999999997543332333222123456778899999
Q ss_pred cEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 467 MLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 467 v~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
+++.+.++.+||+||+++|++|||+++++|++++.++.+
T Consensus 413 ll~~~~~~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 413 LIMRAVGDRMIISPPLVITHAEIDELVEKARKALDATAA 451 (456)
T ss_pred cEEeecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999887888999999999999999999999999987654
No 12
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=5.8e-78 Score=629.83 Aligned_cols=438 Identities=36% Similarity=0.727 Sum_probs=372.9
Q ss_pred cccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchH
Q 010250 67 DMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPS 146 (514)
Q Consensus 67 ~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~ 146 (514)
.+|+||.+........|+++++++|+|+||+|||+||||.+++|+++|||+||+|.+|+.+|++++.+.+.+...++++.
T Consensus 18 ~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~ 97 (466)
T PRK07036 18 HLLHPWHDFSSLGKEGSLVIVEAEGIYVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGDMTNAPA 97 (466)
T ss_pred ccccCccCccccccCCCceEEeCceeEEEECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccccccCCHHH
Confidence 35677665432222368999999999999999999999999999999999999999999999998765544322467889
Q ss_pred HHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCC
Q 010250 147 LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDL 226 (514)
Q Consensus 147 ~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~ 226 (514)
.+++++|++.++ .++++|+|+|||+||||.|+|+||.|+..++.++|.+||.++++|||+|.+++++++.+.++..|.+
T Consensus 98 ~~lae~L~~~~p-~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~ 176 (466)
T PRK07036 98 AELAAKLAELAP-GDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDY 176 (466)
T ss_pred HHHHHHHHHhCC-CCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccC
Confidence 999999999874 4578999999999999999999999987777778899999999999999999999998877777776
Q ss_pred CCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCC
Q 010250 227 PAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDI 306 (514)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gi 306 (514)
..+.+.+++.|+.++++. +...+.+...+.+++++.+....++++|+||+||+|+++|+++|+++||++|+++|++||+
T Consensus 177 ~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~ 255 (466)
T PRK07036 177 ASDLVHHLSSPNPYRRPA-GMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDI 255 (466)
T ss_pred CCCCcEEecCCccccccc-CCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 556666777777666432 2334455566677888888766678999999999999999999999999999999999999
Q ss_pred EEEEechhcCcccccccceec-ccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHH
Q 010250 307 LFIADEVICAFGRLGTMFGCD-KYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSC 385 (514)
Q Consensus 307 llI~DEv~tG~gr~G~~~~~~-~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~ 385 (514)
+||+|||||||||+|++|+++ ++|+.|||+|+||+|+||++|+|++++++++++.+.........+.|++||++||++|
T Consensus 256 llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~ 335 (466)
T PRK07036 256 LYISDEVVTGFGRLGHFFASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVAC 335 (466)
T ss_pred EEEEeechhCCCcCchhhhhhhhcCCCCCEEEEccccccCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHHH
Confidence 999999999999999999988 7999999999999999998899999999999998864211111357889999999999
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC
Q 010250 386 AVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH 465 (514)
Q Consensus 386 aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 465 (514)
++++++|++++++++.+++++++++|+++|+++.+++.+.+++|.|+|++++|.++.....++..+......+...|+++
T Consensus 336 aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (466)
T PRK07036 336 AAALKNIEIMEREGLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQER 415 (466)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHC
Confidence 99999999999899999999999999999998877899999999999999999765433333333333566788899999
Q ss_pred CcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250 466 GMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEER 506 (514)
Q Consensus 466 Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~ 506 (514)
|+++.+.++.+||+||+++|++|||+++++|+++++++.+.
T Consensus 416 Gvl~~~~~~~~~l~Ppl~it~~~id~~~~~l~~al~~~~~~ 456 (466)
T PRK07036 416 GLLVRPLEHLCVLSPPLIITRAQIDEIVAILRAAIEETADE 456 (466)
T ss_pred CcEEeecCCEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999877889999999999999999999999999887553
No 13
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=3.7e-78 Score=630.22 Aligned_cols=435 Identities=25% Similarity=0.508 Sum_probs=369.3
Q ss_pred ccccCCccccccCCCC-CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCc
Q 010250 66 HDMLAPFTAGWQSTDV-HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTK 144 (514)
Q Consensus 66 ~~~~~p~~~~~~~~~~-~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~ 144 (514)
+..|+|+......... .|+++++++|+|+||.|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.+.+ ..+++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~-~~~~~ 107 (472)
T PRK08742 29 AVLWHPCTQMREHPHTLPLVPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLA-GFTHE 107 (472)
T ss_pred cccccCCcccccccccCCCeeEEecccCEEEeCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCcccc-ccCCH
Confidence 3367777654322112 247899999999999999999999999999999999999999999999987654332 34678
Q ss_pred hHHHHHHHHHHhcCc----CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccc
Q 010250 145 PSLDLAKELLEMFTA----SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPAL 220 (514)
Q Consensus 145 ~~~ela~~L~~~~~~----~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~ 220 (514)
+..+|+++|++.++. .++++|+|++||+||||+|||+||.|+..++.++|.+||.++++|||+|.+++++++.+.+
T Consensus 108 ~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~ 187 (472)
T PRK08742 108 PAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLY 187 (472)
T ss_pred HHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCccc
Confidence 889999999998853 1468999999999999999999999987777778899999999999999999999998777
Q ss_pred cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcc-ccCCCCcccCChhHHHHHHH
Q 010250 221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQA 299 (514)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEp-v~~~~G~~~p~~~~L~~l~~ 299 (514)
+..|.+..+.+.+++.|+.++... +...+++...+++.+++++.. .++++++||+|| +||++|+++||++||++|++
T Consensus 188 ~~~~~p~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~l~~~~~~-~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~ 265 (472)
T PRK08742 188 RRVYAPLLLESLFAPSPDAYLAEP-GQSAEDYALQAADALQALFEQ-SPGEICALILEPRLQCAGGMRMHHPAYLRRARE 265 (472)
T ss_pred ccccCCCCCCCEEeCCCCcccccc-CCCHHHHHHHHHHHHHHHHHh-CCCceEEEEEccccccCCCcccCCHHHHHHHHH
Confidence 777776656667778887766543 334444555667888888863 457899999999 69999999999999999999
Q ss_pred HHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCC
Q 010250 300 VVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379 (514)
Q Consensus 300 l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~ 379 (514)
+|++||++||+|||||||||+|++|+++++|+.|||+|+||+|+||++|+|++++++++++.+.... ..+.+.|++||+
T Consensus 266 lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~~gKgl~gG~~Plaav~~~~ei~~~~~~~~-~~~~~~h~~T~~ 344 (472)
T PRK08742 266 LCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDS-RERAFLHSHSYT 344 (472)
T ss_pred HHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEEEcccccCCCCCcceeeccHHHHHHhhccC-ccCccCcCCCCC
Confidence 9999999999999999999999999999999999999999999999779999999999999875321 113557899999
Q ss_pred CcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHH
Q 010250 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFG 459 (514)
Q Consensus 380 ~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 459 (514)
+||++|++++++|++++++++.+++++++++|++.++.+.+++.+.++||.|++++++|..+..+..++..+......+.
T Consensus 345 gnpl~~Aaa~a~L~~i~~~~l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~ 424 (472)
T PRK08742 345 GNPLACAAALATLDIFADDDVIARNQPTAARMTQLAAQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAY 424 (472)
T ss_pred ccHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEeccceEEEEEeccCccccccCCchhHHHHHHH
Confidence 99999999999999999999999999999999988887767899999999999999999754433333333333456678
Q ss_pred HHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 460 AQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 460 ~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
+.|+++||++.+.|+.|||.||+++|++||++++++|+++++++.
T Consensus 425 ~~~~~~Gll~~~~g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~~ 469 (472)
T PRK08742 425 RAALARGVVLRPLGDVLYWMPPYCVDEAQLALLADTTRHAIDEAV 469 (472)
T ss_pred HHHHHCCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 899999999999889999999999999999999999999997653
No 14
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.3e-77 Score=626.63 Aligned_cols=432 Identities=27% Similarity=0.555 Sum_probs=368.9
Q ss_pred ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250 68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 147 (514)
Q Consensus 68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ 147 (514)
.|+|++.........|+++++++|+|+||.|||+||||.+++|+.+|||+||+|.+|+.+|++++.+.+.. ...++...
T Consensus 15 ~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~-~~~~~~~~ 93 (466)
T PRK07030 15 LWHPCTQMKDHEQLPLIPIRRGEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILA-GFSHEPVI 93 (466)
T ss_pred cccccccccccccCCCceEEeeeccEEEECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCcccc-ccCCHHHH
Confidence 45665543211111346899999999999999999999999999999999999999999999987654332 34678889
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250 148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 227 (514)
Q Consensus 148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~ 227 (514)
+|+++|++.++ .++++|+|++||+||||.|+|+|+.|+..++.++|.+||.++++|||+|.+++++++.+.++..+.+.
T Consensus 94 ~lae~L~~~~p-~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~ 172 (466)
T PRK07030 94 ELSERLVKITP-PGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPL 172 (466)
T ss_pred HHHHHHHHhCC-CCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCcc
Confidence 99999999874 45789999999999999999999999877777888999999999999999999999987777777765
Q ss_pred CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHHHhcCC
Q 010250 228 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKYDI 306 (514)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEp-v~~~~G~~~p~~~~L~~l~~l~~~~gi 306 (514)
.+.+.++++|+.++... +...+.+..++++++++++.+ .++++|+||+|| +|+++|+++|+++||++|+++|++||+
T Consensus 173 ~~~~~~~p~~~~~~~~~-~~~~~~~~~~~l~~le~~~~~-~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~ 250 (466)
T PRK07030 173 LLDTIKVPSPDCYLRPE-GMSWEEHSRRMFAHMEQTLAE-HHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGV 250 (466)
T ss_pred CCCCEEcCCCCcccccc-CCCHHHHHHHHHHHHHHHHHh-CCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCC
Confidence 56677778887766543 334456666778888888864 457899999999 799999999999999999999999999
Q ss_pred EEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHH
Q 010250 307 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA 386 (514)
Q Consensus 307 llI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~a 386 (514)
+||+|||||||||+|++|+++++|+.||++|+||+|+||++|+|++++++++++.+.......+.+.|++||++||++|+
T Consensus 251 llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~a 330 (466)
T PRK07030 251 HLIHDEIAVGFGRTGTMFACEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACA 330 (466)
T ss_pred EEEEeehhhCcCccccchHHHhcCCCCCEEeeehhccCCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999988999999999999988642212234679999999999999
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250 387 VAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 466 (514)
Q Consensus 387 aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 466 (514)
+++++|++++++++.+++++++++|+++|+++.+++.+.+++|.|+++++++..+.....++.........+...|+++|
T Consensus 331 aa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~G 410 (466)
T PRK07030 331 AALATLDIFEQDNVIENNRALARRMAEATAHLADHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERG 410 (466)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999998668899999999999999997544333333222223456888999999
Q ss_pred cEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 467 MLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 467 v~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+++.+.++.+||.||+++|++||++++++|+++++++
T Consensus 411 vl~~~~g~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 411 ALLRPLGSVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred eEEEecCCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 9999888899999999999999999999999999887
No 15
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-77 Score=623.06 Aligned_cols=418 Identities=35% Similarity=0.667 Sum_probs=360.2
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++++|+|+||+|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.+.. ...++...+|+++|++.++ .+
T Consensus 12 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~-~~~~~~~~~lae~L~~~~p-~~ 89 (443)
T PRK07483 12 TLPVAVAGEGIYLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTS-FFTTEPAEALADRLVAAAP-AG 89 (443)
T ss_pred CCceEEeceEEEEEeCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCcccc-ccCCHHHHHHHHHHHHhCC-CC
Confidence 689999999999999999999999999999999999999999999999987654332 1357888999999999874 45
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
+++|+|++||+||||.|+|+||.|+..++.++|.+||.++++|||+|.+++++++.+.++..+.+..+.+.+++.|..|+
T Consensus 90 ~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~ 169 (443)
T PRK07483 90 LEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYR 169 (443)
T ss_pred CCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCcccc
Confidence 78999999999999999999999987777788899999999999999999999988766666665555556666666566
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccC-CCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIG-AGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 320 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~-~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~ 320 (514)
........+.+...+++++++++....++++|+||+||+|| ++|+++|+++||++|+++|+|||++||+|||||||||+
T Consensus 170 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRt 249 (443)
T PRK07483 170 EQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRT 249 (443)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccC
Confidence 54333444556666678888877666667899999999998 58999999999999999999999999999999999999
Q ss_pred cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250 321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI 400 (514)
Q Consensus 321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~ 400 (514)
|++|+++++|++|||+|+||+|+||++|+|++++++++++.+... .+.+.|++||++||++|++++++|++++++++
T Consensus 250 G~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~---~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l 326 (443)
T PRK07483 250 GTLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIADG---SGFFQHGHTYLGHATACAAALAVQRVIAEDGL 326 (443)
T ss_pred cHHHHHhhcCCCCCeeeehhhhccCccccEEEEEcHHHHHHHhcC---CCccccCCCCCCCHHHHHHHHHHHHHHHhcCH
Confidence 999999999999999999999999977999999999999988642 12456999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------
Q 010250 401 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS------- 472 (514)
Q Consensus 401 ~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~------- 472 (514)
.+++++++++|+++|+++ .+++.+.++||.|+|++++|..+..+..++.........+.+.|+++|+++.+.
T Consensus 327 ~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~ 406 (443)
T PRK07483 327 LANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGV 406 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCC
Confidence 999999999999999987 678999999999999999997654333332222234567889999999999764
Q ss_pred -CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 473 -GDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 473 -g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
++.|||.||+++|++|||+++++|++++.++.
T Consensus 407 ~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~ 439 (443)
T PRK07483 407 RGDHVLLAPPFIITAAQIDEIVERLGDAIDAAL 439 (443)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 36899999999999999999999999998654
No 16
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=4e-77 Score=623.12 Aligned_cols=433 Identities=36% Similarity=0.667 Sum_probs=364.4
Q ss_pred ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250 68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 147 (514)
Q Consensus 68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ 147 (514)
.|+|+..........|+++++|+|+|+||.|||+||||.+|+|+++|||+||+|++|+.+|++++.+.+..+..+++...
T Consensus 22 ~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~ 101 (460)
T PRK12403 22 HIHAFLDQKALNAEGPRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTTHPAVI 101 (460)
T ss_pred cccccccccccccCCCceEEeceeeEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHH
Confidence 56776644221223589999999999999999999999999999999999999999999999997765444345778899
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250 148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 227 (514)
Q Consensus 148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~ 227 (514)
+|+++|+++++ .++++++|++||+|||++|||+|+.|+..+++++|.+||.+.++|||++++++++++.+.++. +...
T Consensus 102 ~lae~L~~~~p-~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~-~~~~ 179 (460)
T PRK12403 102 ELSELLFSLLP-GHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHE-MGGL 179 (460)
T ss_pred HHHHHHHHhCC-CCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccc-cCCC
Confidence 99999999974 346899999999999999999999997766766678899999999999999999998765443 3333
Q ss_pred CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCE
Q 010250 228 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 307 (514)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gil 307 (514)
.+.+.+++.|..|+.+.. ...+.+...+++++++.+.+..++++++||+||+||++|++.|+++||++|+++|++||++
T Consensus 180 ~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~l 258 (460)
T PRK12403 180 IPDVAHIDEPYWYANGGE-LTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVL 258 (460)
T ss_pred CCCCEEeCCCcccccccC-CChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 455667777776664321 2234565556678877776655678999999999999999999999999999999999999
Q ss_pred EEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHH
Q 010250 308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV 387 (514)
Q Consensus 308 lI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aa 387 (514)
||+|||||||||+|++|+++++|++|||+|+||+|+||++|+|++++++++++.+.... +.+.|++||++||++|++
T Consensus 259 LI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gK~lggG~~Piga~v~~~~i~~~~~~~~---~~~~~~~T~~gnPl~~Aa 335 (460)
T PRK12403 259 LCADEVIGGFGRTGEWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQG---GVFAHGLTYSGHPVAAAV 335 (460)
T ss_pred EEEeccccCCCcCchhhhhhhcCCCCCeEEEcccccccccceEEEEECHHHHHHHhcCC---CccccCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999779999999999999886321 345689999999999999
Q ss_pred HHHHHHHHhhccHHHHHH-HHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC
Q 010250 388 AIEALKIYKERNIVEQVN-KIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH 465 (514)
Q Consensus 388 a~aal~~~~~~~~~~~~~-~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 465 (514)
++++|++++++++.++++ +++++|++.|+++ .+++++.++||.|+|++++|..+.....++.........+...|+++
T Consensus 336 ala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (460)
T PRK12403 336 AIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEE 415 (460)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHhC
Confidence 999999999989999996 9999999999987 67899999999999999999754333332222222344567788999
Q ss_pred CcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250 466 GMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEER 506 (514)
Q Consensus 466 Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~ 506 (514)
|+++.+.++.+||+||+++|++|||+++++|+++++++.++
T Consensus 416 Gll~~~~~~~~~l~Ppl~it~~eid~~~~~l~~al~~~~~~ 456 (460)
T PRK12403 416 GVIIRSTLGRMIMAPALVAGRAEIDELVDKTRIAVDRTARE 456 (460)
T ss_pred CEEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99998877789999999999999999999999999887644
No 17
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=4.3e-77 Score=621.12 Aligned_cols=425 Identities=24% Similarity=0.483 Sum_probs=363.4
Q ss_pred ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250 68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 147 (514)
Q Consensus 68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ 147 (514)
.|+|++.........|+++++++|+|+||+|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.... ..+++...
T Consensus 22 ~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~ 100 (453)
T PRK06943 22 VWHPCTQMKHHERLPLLPVARGEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLA-GCTHEPAI 100 (453)
T ss_pred cccCCcCccccccCCCceEEecccCEEEeCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCcccc-ccCCHHHH
Confidence 56666543211112589999999999999999999999999999999999999999999999987654332 34678889
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250 148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 227 (514)
Q Consensus 148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~ 227 (514)
+|+++|++.++ ..+++|+|++||+||||.|+|+|+.|+..++.++|.+||.++++|||+|.+++++++...++..|.+.
T Consensus 101 ~lAe~L~~~~p-~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~ 179 (453)
T PRK06943 101 ELAERLAALTG-GTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPL 179 (453)
T ss_pred HHHHHHHHhCC-CCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccC
Confidence 99999999874 34679999999999999999999988776677888999999999999999999999988777777766
Q ss_pred CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHHHhcCC
Q 010250 228 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKYDI 306 (514)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEp-v~~~~G~~~p~~~~L~~l~~l~~~~gi 306 (514)
.+.+..+++|+.++... ....+.+..++++++++++.. .++++|+||+|| +||++|+++||++||++|+++|++||+
T Consensus 180 ~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~l~~~l~~-~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gi 257 (453)
T PRK06943 180 IRHAHVVASPDARGARP-GETAADVAARALADVRRLFAE-RAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGV 257 (453)
T ss_pred CCCCEEECCCCcccccc-CCCHHHHHHHHHHHHHHHHHh-CCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCC
Confidence 56666677776554432 233455566778888888864 457899999999 599999999999999999999999999
Q ss_pred EEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHH
Q 010250 307 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA 386 (514)
Q Consensus 307 llI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~a 386 (514)
+||+|||||||||+|++|+++++|++|||+|+||+|+||++|+|++++++++++.+.... ..+.+.|++||++||++|+
T Consensus 258 llI~DEV~TG~GRtG~~fa~~~~gv~PDivt~gKgl~gG~~Pi~av~~~~ei~~~~~~~~-~~~~~~~~~T~~gnpl~~a 336 (453)
T PRK06943 258 HLIADEIAVGCGRTGTFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDD-VTRGFLHSHSYTGNPLACR 336 (453)
T ss_pred EEEeechhhCCCCCcchhHHHhCCCCCCeEeeehhhccCcccceEEEEcHHHHHhhcccC-ccCCccCCCCCCCCHHHHH
Confidence 999999999999999999999999999999999999999889999999999999886321 1123568999999999999
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250 387 VAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 466 (514)
Q Consensus 387 aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 466 (514)
+++++|++++++++.+++++++++|+++|+++.+++.+.+++|.|+|++++|..+..+ .......+...|+++|
T Consensus 337 aa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gvel~~~~~~------~~~~~~~i~~~~~~~G 410 (453)
T PRK06943 337 AALATLDLFAEDDVLARNARKSARLRAALAPLAAHPQVRHLRQRGTIFAFDVALDGDA------ARTFSRRFFEAALERE 410 (453)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccccEEEEEEccCCCc------chHHHHHHHHHHHHCC
Confidence 9999999999999999999999999999999866788889999999999999743211 1123567888999999
Q ss_pred cEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 467 MLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 467 v~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+++.+.++.+||+||+++|++|||+++++|+++++++
T Consensus 411 ll~~~~g~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 411 LLLRPIGTTVYLMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred cEEEecCCEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 9999888889999999999999999999999999876
No 18
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=3.6e-77 Score=623.48 Aligned_cols=433 Identities=31% Similarity=0.586 Sum_probs=368.5
Q ss_pred ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250 68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 147 (514)
Q Consensus 68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ 147 (514)
.|+|+..........|+++++|+|+|+||.|||+||||.+++|+++|||+||+|.+|+.+|++++.+.+.+ +.+++...
T Consensus 24 ~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~-~~~~~~~~ 102 (460)
T PRK06916 24 VWHPFTQMKDYLEEDPLIIERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLL-GLANVPSI 102 (460)
T ss_pred cccccccccccccCCCeeEEeccccEEEeCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCcccc-ccCCHHHH
Confidence 45665532111123689999999999999999999999999999999999999999999999987654332 34678889
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250 148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 227 (514)
Q Consensus 148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~ 227 (514)
+|+++|++.++ .++++++|+|||+||||.|+|+||.|+..++.++|.+||.++++|||++.+++++++.+.++..|.+.
T Consensus 103 ~lae~L~~~~p-~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~ 181 (460)
T PRK06916 103 LLAEKLIEVVP-EGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSL 181 (460)
T ss_pred HHHHHHHHhCC-CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCC
Confidence 99999999974 45689999999999999999999999877777889999999999999999999999987777777765
Q ss_pred CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHHHhcCC
Q 010250 228 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKYDI 306 (514)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEp-v~~~~G~~~p~~~~L~~l~~l~~~~gi 306 (514)
.+.+.++++|+.++.+... +.+.+...+++++++++.. .++++|+||+|| +||++|+++|+++||++|+++|++||+
T Consensus 182 ~~~~~~~p~p~~~~~~~~~-~~~~~~~~~~~~l~~~l~~-~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~ 259 (460)
T PRK06916 182 LFEAIKMPYPYTYRSPYGN-DKAEIVKKHLEELEELLKE-KHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNV 259 (460)
T ss_pred CCCCEEeCCCcccccccCC-ChHHHHHHHHHHHHHHHHh-CCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCC
Confidence 5666677777776654322 3345556677888888863 457899999999 699999999999999999999999999
Q ss_pred EEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHH
Q 010250 307 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA 386 (514)
Q Consensus 307 llI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~a 386 (514)
+||+|||||||||+|++|+++++|+.|||+|+||+|+||++|+|++++++++++.+.......+.+.|++||++||++|+
T Consensus 260 llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~a 339 (460)
T PRK06916 260 LFITDEVATGFGRTGKMFACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCA 339 (460)
T ss_pred EEEeechhhCCCcCchhhHHHhcCCCCCeeeeehhhhcCccccceeeecHHHHHHhhccccccCccccCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999978999999999999987532111234568999999999999
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250 387 VAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 466 (514)
Q Consensus 387 aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 466 (514)
+++++|++++++++.+++++++++|++.|+++.+++.+.+++|.|+|++++|.++.....++.........+...|+++|
T Consensus 340 aa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~G 419 (460)
T PRK06916 340 VALANLELYEKTNLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELG 419 (460)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEeecccccccCCCchhhHHHHHHHHHHHCC
Confidence 99999999999999999999999999999998668889999999999999997654433333222233567889999999
Q ss_pred cEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 467 MLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 467 v~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
+++.+.++.+||.||+++|++||++++++|+++++++.
T Consensus 420 vl~~~~g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 420 MLTRPLGNTIVFMPPLASTIDELDEMLRILYKAISDVT 457 (460)
T ss_pred eEEEecCCEEEEeCCcccCHHHHHHHHHHHHHHHHhhc
Confidence 99998888999999999999999999999999997653
No 19
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=3.9e-76 Score=614.81 Aligned_cols=414 Identities=34% Similarity=0.662 Sum_probs=354.1
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++++|+|+||.|||+||||.+++|+++|||+||+|++|+.+|++++.+.+. ..++++..+|+++|+++++.
T Consensus 29 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~lae~l~~~~~~-- 104 (451)
T PRK07678 29 ATMVVAKAEGAWVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPL--TQSHEPAIKLAEKLNEWLGG-- 104 (451)
T ss_pred CCeeEEeeeeeEEEeCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCcccc--ccCCHHHHHHHHHHHHhCCC--
Confidence 47999999999999999999999999999999999999999999999998765432 23567889999999998743
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
.++|+|++||+||||.|||+||.|++.++.++|.+||.++++|||++.+++++++.+.++..|.+..+.+.+++.|+.++
T Consensus 105 ~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (451)
T PRK07678 105 EYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYR 184 (451)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCcccc
Confidence 36999999999999999999999987767778899999999999999999999988776666766667777788887776
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G 321 (514)
.+... ..+......++++++++....++++|+||+||+|+++|+++|+++||++|+++|++||++||+|||||||||+|
T Consensus 185 ~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG 263 (451)
T PRK07678 185 MPGIE-SEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTG 263 (451)
T ss_pred ccccC-ChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCc
Confidence 54321 11222333456678888655567899999999999999999999999999999999999999999999999999
Q ss_pred ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV 401 (514)
Q Consensus 322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~ 401 (514)
++|+++++|++|||+|+||+|+||++|+|++++++++++.+.... ..+.+.|++||++||++|++++++|++++++++.
T Consensus 264 ~~~~~~~~gv~PDivt~gK~lggG~~Pi~av~~~~~i~~~~~~~~-~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~ 342 (451)
T PRK07678 264 KAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKG-EYEHFRHVNTFGGNPAACALALKNLEIMENENLI 342 (451)
T ss_pred hhHHHHhcCCCCCEEEeecccccCCcceeEEEEcHHHHHHHhccC-cccccccCCCCCcCHHHHHHHHHHHHHHHhCCHH
Confidence 999999999999999999999999889999999999999886421 1124579999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------C
Q 010250 402 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------G 473 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------g 473 (514)
+++++++++|+++|+++ .+++.+.+++|.|+|+++++..+.....+ .+......+...|+++|+++.+. +
T Consensus 343 ~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~--~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~ 420 (451)
T PRK07678 343 ERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEP--ADNDKVASVVAACKEKGLIIGKNGDTVAGYN 420 (451)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCc--CchHHHHHHHHHHHHCCcEEeecCccccCCC
Confidence 99999999999999875 67899999999999999999754322111 12234567888999999999764 2
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 474 DNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 474 ~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+.|||+||+++|++|||+++++|+++++++
T Consensus 421 ~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 421 NVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 679999999999999999999999998754
No 20
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=4.8e-76 Score=613.54 Aligned_cols=419 Identities=32% Similarity=0.580 Sum_probs=354.6
Q ss_pred ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250 68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 147 (514)
Q Consensus 68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ 147 (514)
+++|+.... ...|+++++++|+|+||+|||+||||.+|+|+++|||+||+|++|+.+|++++.+.+. ...+++..
T Consensus 24 ~~~~~~~~~---~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~--~~~~~~~~ 98 (451)
T PRK06062 24 VFHSWSAQG---KINPMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAP--AHANDARS 98 (451)
T ss_pred ccccccccc---cCCCceEEeceeeEEEECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCC--ccCCHHHH
Confidence 456654332 2368999999999999999999999999999999999999999999999998765433 33678889
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250 148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 227 (514)
Q Consensus 148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~ 227 (514)
+|+++|+++.+ .++++|+|++||+||||.|+|+||.| ++|.+||.++++|||++.+++++++.+..+. ..+.
T Consensus 99 ~lae~L~~~~p-~~~~~v~f~~SGsEAve~AlklAr~~------tgr~~ii~~~~~yHG~t~~als~~~~~~~~~-~~~~ 170 (451)
T PRK06062 99 EAARLIAERAP-GDLSKVFFTNGGADANEHAVRMARLH------TGRPKVLSAYRSYHGGTGSAINLTGDPRRWP-NDTG 170 (451)
T ss_pred HHHHHHHHhCC-CCCCEEEEcCChHHHHHHHHHHHHHh------hCCceEEEEeCCCCCCCHHHHhhcCCccccc-CCCC
Confidence 99999999874 45789999999999999999999988 5688999999999999999999988664332 2322
Q ss_pred CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCE
Q 010250 228 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 307 (514)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gil 307 (514)
.+.+.+++.|..++.++...+.+++...+++++++++....++++++||+||+|+++|+++|+++||++|+++|++||++
T Consensus 171 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~l 250 (451)
T PRK06062 171 RAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIV 250 (451)
T ss_pred CCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 34455666666666544322334455566788999886555578999999999999999999999999999999999999
Q ss_pred EEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHH
Q 010250 308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV 387 (514)
Q Consensus 308 lI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aa 387 (514)
||+|||||||||+|++|+++++|+.||++||||+|+||++|+|++++++++++.+.. ..+.|++||++||++|++
T Consensus 251 LI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~gK~lggG~~Pigav~~~~~i~~~~~~-----~~~~~~~T~~gnpl~~Aa 325 (451)
T PRK06062 251 LIADEVMAGFGRTGKWFAIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATFAD-----RPYPGGLTYSGHPLACAA 325 (451)
T ss_pred EEeeccccCCCcCcHHHHHHhcCCCCCeeeechhhhcCCcCcEEEEEcHHHHHHhcc-----CCCCCCCCCCCCHHHHHH
Confidence 999999999999999999999999999999999999998899999999999998853 245688999999999999
Q ss_pred HHHHHHHHhhccHHHHHHHHH-HHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCC---ccchHHHHHHHH
Q 010250 388 AIEALKIYKERNIVEQVNKIA-PKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPP---EWGIGAYFGAQC 462 (514)
Q Consensus 388 a~aal~~~~~~~~~~~~~~~~-~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~l 462 (514)
++++|++++++++.+++++++ ++|++.|+++ .+++.+.+++|.|+|++++|..+.....++.. .......+...|
T Consensus 326 a~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l 405 (451)
T PRK06062 326 AVATINAMEEEGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAAC 405 (451)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHH
Confidence 999999999989999999999 6999999998 56788999999999999999754322222111 122456788999
Q ss_pred HHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 463 EKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 463 ~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
+++|+++.+.++.+||+||+++|++|||+++++|+++++++.
T Consensus 406 ~~~Gvl~~~~~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~ 447 (451)
T PRK06062 406 KERGLLPFVNGNRIHVVPPCTVTEDEVREGLAILDAALAVAD 447 (451)
T ss_pred HHCCcEEeecCCEEEEECCccCCHHHHHHHHHHHHHHHHHhh
Confidence 999999988788999999999999999999999999997764
No 21
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=5.2e-75 Score=606.63 Aligned_cols=433 Identities=35% Similarity=0.674 Sum_probs=368.4
Q ss_pred ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250 68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 147 (514)
Q Consensus 68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ 147 (514)
+|+||+.........|+++++|+|+|+||.|||+||||.+++|+++|||+||+|++|+.+|++++.+... +...++...
T Consensus 20 ~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~-~~~~~~~~~ 98 (460)
T PRK06541 20 LWMHFTRHGAYIDAPVPVIVRGEGCYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPL-WSYAHPPAI 98 (460)
T ss_pred cccCccCccccccCCCceEEeCcccEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccc-cccCCHHHH
Confidence 7888887644322247889999999999999999999999999999999999999999999998765433 234678889
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250 148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 227 (514)
Q Consensus 148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~ 227 (514)
+++++|++.++ .++++|+|++||+||+|.|+|+||.|++.++.++|.+||.++++|||++.+++++++.+.++..|.+.
T Consensus 99 ~la~~l~~~~p-~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~ 177 (460)
T PRK06541 99 ELAERLAALAP-GDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPL 177 (460)
T ss_pred HHHHHHHHhCC-CCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCC
Confidence 99999999874 35789999999999999999999999876677778999999999999999999999887777777766
Q ss_pred CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCE
Q 010250 228 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 307 (514)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gil 307 (514)
.+.+.+++.|+.++++..+.+.+.+...+++.+++++...+++++++||+||+++++|+++||++||++|+++|++||++
T Consensus 178 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~l 257 (460)
T PRK06541 178 VPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVL 257 (460)
T ss_pred CCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 67777888887776541122334455566788898887655678999999999999999999999999999999999999
Q ss_pred EEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHH
Q 010250 308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV 387 (514)
Q Consensus 308 lI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aa 387 (514)
||+|||||||||+|++|+++++|++||++|+||+|+||++|+|++++++++++.+.... +.+.|++||++||++|++
T Consensus 258 lI~DEV~tGfGR~G~~~a~~~~gv~PDivt~gK~l~~G~~pigav~~~~~i~~~~~~~~---~~~~~~~T~~gnp~~~aa 334 (460)
T PRK06541 258 LVSDEVICAFGRLGEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFLDGP---TMFLHGYTFGGHPVSAAV 334 (460)
T ss_pred EEEechhhCCCcCchhhhhhhcCCCCCEEEecccccCCccceeEEEEcHHHHHHhhcCC---CccccCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999669999999999999886421 355688999999999999
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCc---cchHHHHHHHHHH
Q 010250 388 AIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPE---WGIGAYFGAQCEK 464 (514)
Q Consensus 388 a~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~l~~ 464 (514)
++++|++++++++.+++++++++|+++|+++.+++++.+++|.|+|++++|.++.....++... ......+...|++
T Consensus 335 ala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 414 (460)
T PRK06541 335 ALANLDIFEREGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFE 414 (460)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHh
Confidence 9999999998899999999999999999998558889999999999999997543333333221 1122357789999
Q ss_pred CCcEEEee--C-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 465 HGMLVRVS--G-DNIMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 465 ~Gv~~~~~--g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
+|+++.+. + +.|||+||+++|++|||+++++|++++.++..
T Consensus 415 ~Gi~~~~~~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06541 415 AGLYCRADDRGDPVVQLAPPLISGQEEFDEIEQILRSVLTEAWA 458 (460)
T ss_pred CCeEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999863 3 57999999999999999999999999976543
No 22
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-74 Score=602.35 Aligned_cols=417 Identities=34% Similarity=0.572 Sum_probs=355.6
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
+| ++++++|+|+||+|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.+.. ...+++..+|+++|++.++ ..
T Consensus 14 ~p-~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~lae~L~~~~p-~~ 90 (447)
T PRK06917 14 YP-VISHGKGVYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRS-QFTSEPAEKLAKKLSDLSP-GD 90 (447)
T ss_pred CC-eEEeeeeeEEEeCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCcccc-ccCCHHHHHHHHHHHHhCC-CC
Confidence 56 589999999999999999999999999999999999999999999986543221 2357888999999999874 34
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
+++++|++||+||+|.|||+|+.|+..++.++|.+||.++++|||++.+++++++.+.++..|.+..+.+..++.|..++
T Consensus 91 ~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 170 (447)
T PRK06917 91 LNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYR 170 (447)
T ss_pred CCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccc
Confidence 67999999999999999999999987778788999999999999999999998887766666654444445555565555
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCC-CCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGA-GGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 320 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~-~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~ 320 (514)
.+.+ .+.+.+..++.+.+++++.+..++++|+||+||++++ +|+++|+++||++|+++|++||++||+|||+|||||+
T Consensus 171 ~~~~-~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRt 249 (447)
T PRK06917 171 CPVQ-KVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRT 249 (447)
T ss_pred cccC-CChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcc
Confidence 4332 2234455667788888887665568999999999985 6799999999999999999999999999999999999
Q ss_pred cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250 321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI 400 (514)
Q Consensus 321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~ 400 (514)
|++|+++++++.||++|+||+|+||++|+|++++++++++.+.... +.+.|++||++||++|++++++|++++++++
T Consensus 250 G~~~a~~~~gv~PDi~~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~---~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l 326 (447)
T PRK06917 250 GAMFAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILRGS---RSIMSGHTLSANPLSAATALAVLEYMEKHNL 326 (447)
T ss_pred cchhhHHhcCCCCCEEEeeehhccCCcceEEEEEcHHHHHHHhccC---cccccccCCCCCHHHHHHHHHHHHHHHHCCH
Confidence 9999999999999999999999999779999999999999886421 2456889999999999999999999998899
Q ss_pred HHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------
Q 010250 401 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS------- 472 (514)
Q Consensus 401 ~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~------- 472 (514)
.+++++++++|++.|+++ .+++.+.+++|.|+|++++|..+.....++.........+...|+++|+++.+.
T Consensus 327 ~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~ 406 (447)
T PRK06917 327 PEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGK 406 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCC
Confidence 999999999999999998 568999999999999999997543333333222235677889999999999865
Q ss_pred -CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 473 -GDNIMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 473 -g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
++.+||+||+++|++|||+++++|+++++++.+
T Consensus 407 ~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 440 (447)
T PRK06917 407 EGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQ 440 (447)
T ss_pred CCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999999987743
No 23
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=6.5e-74 Score=596.55 Aligned_cols=426 Identities=35% Similarity=0.628 Sum_probs=358.0
Q ss_pred ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250 68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 147 (514)
Q Consensus 68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ 147 (514)
+|+|+.... ...+.|+++++++|+|+||.|||+||||.+++|+++|||+||+|.+|+.+|++++.+.+.+ ...++...
T Consensus 18 ~~~~~~~~~-~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~-~~~~~~~~ 95 (445)
T PRK09221 18 HWMPFTANR-QFKAAPRLLVSAEGMYYTDADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAF-QMGHPLAF 95 (445)
T ss_pred cccCccccc-ccCCCCceEEeccccEEEeCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCcccc-ccCCHHHH
Confidence 356654321 1123689999999999999999999999999999999999999999999999987655432 34678889
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250 148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 227 (514)
Q Consensus 148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~ 227 (514)
+|+++|++.++ .++++|+|++||+||||.|+|+||.|+..+++++|.+||.++++|||+|.+++++++.+.++..|...
T Consensus 96 ~la~~L~~~~p-~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~ 174 (445)
T PRK09221 96 ELAERLAELAP-GGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGL 174 (445)
T ss_pred HHHHHHHHhCC-CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCC
Confidence 99999999874 35789999999999999999999999877666678899999999999999999999887777666655
Q ss_pred CCcccccCCCC-cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCC
Q 010250 228 APFVLHTDCPH-YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDI 306 (514)
Q Consensus 228 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gi 306 (514)
.+.+.++++|. .+++.... ..+.+...+.+++++++...+++++++||+||+++++|++.|+++||++|+++|++||+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~ 253 (445)
T PRK09221 175 LPGVDHLPHTLDLPENAFSK-GQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGI 253 (445)
T ss_pred CCCCeEeCCCccccccccCC-ChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCC
Confidence 55555666654 33332221 12334445567888888765557899999999999999999999999999999999999
Q ss_pred EEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHH
Q 010250 307 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA 386 (514)
Q Consensus 307 llI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~a 386 (514)
+||+|||||||||+|++|+++++++.||++|+||+|+||++|+|++++++++++.+.........+.|++||++||++|+
T Consensus 254 llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~a 333 (445)
T PRK09221 254 LLIFDEVITGFGRLGAAFAAERFGVTPDIITFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACA 333 (445)
T ss_pred EEEEeehhhCCCcCchhhHHHhcCCCCCEEEeccccccCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHH
Confidence 99999999999999999999999999999999999999988999999999999988642111123468899999999999
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250 387 VAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 466 (514)
Q Consensus 387 aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 466 (514)
+++++|++++++++.+++++++++|++.|+++.+++.+.++||.|++.++++....... . .....+.+.|+++|
T Consensus 334 aa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~-----~-~~~~~~~~~~~~~G 407 (445)
T PRK09221 334 AGLATLDIYREEDLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAP-----G-ARGYEAFMKCFEKG 407 (445)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEecccccc-----c-chHHHHHHHHHHCC
Confidence 99999999998899999999999999999998667888999999999999997532110 0 12345778999999
Q ss_pred cEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 467 MLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 467 v~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+++.+.++.|||+||+++|++|||+++++|++++.++
T Consensus 408 v~~~~~~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 408 LLVRYTGDTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred eEEeecCCEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 9998888899999999999999999999999999764
No 24
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=7.9e-74 Score=595.41 Aligned_cols=413 Identities=33% Similarity=0.602 Sum_probs=352.1
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++++|+|+||.|||+||||.+|+|+++|||+||+|++|+.+|++++.+.+.+ +.+++...+++++|++.++ .+
T Consensus 28 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~-~~~~~~~~~la~~l~~~~p-~~ 105 (442)
T PRK13360 28 APRLLVAAKGMYYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAF-QMGHPKAFELANRIAEIAP-GG 105 (442)
T ss_pred CCceEEeeeeeEEEeCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccC-CcCCHHHHHHHHHHHHhCC-CC
Confidence 689999999999999999999999999999999999999999999999987655432 4467888999999999874 45
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC-cc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH-YW 240 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~ 240 (514)
+++|+|++||+||||.|+|+||.|+..+++++|.+||++.++|||+|.+++++++.+..+..|....+.+.+++.+. .+
T Consensus 106 ~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~ 185 (442)
T PRK13360 106 LNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLA 185 (442)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhh
Confidence 78999999999999999999999976666667889999999999999999999998877776665555555666553 23
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 320 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~ 320 (514)
+..... ..+.+...+.++||+++....++++++||+||+++++|+++|+++||++|+++|++||++||+|||||||||+
T Consensus 186 ~~~~~~-~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~Grt 264 (442)
T PRK13360 186 RNAFSK-GQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRL 264 (442)
T ss_pred ccccCC-ChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCC
Confidence 322221 1233445567889998876556789999999999999999999999999999999999999999999999999
Q ss_pred cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250 321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI 400 (514)
Q Consensus 321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~ 400 (514)
|++|+++++|+.||++|+||+|+||++|+|++++++++++.+.........+.|++||++||++|++++++|++++++++
T Consensus 265 G~~~a~~~~gv~PDivt~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~~l 344 (442)
T PRK13360 265 GAPFAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGL 344 (442)
T ss_pred ccchhhhhcCCCCceeeeeeccccCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhCCH
Confidence 99999999999999999999999998899999999999998864211111345889999999999999999999998899
Q ss_pred HHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeC
Q 010250 401 VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSP 480 (514)
Q Consensus 401 ~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p 480 (514)
.++++++++++++.|+++.+++.+.+++|.|++.++++........ .....+...|+++||++.+.++.+||+|
T Consensus 345 ~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~------~~~~~~~~~l~~~Gvl~~~~~~~lr~~P 418 (442)
T PRK13360 345 LTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPG------KRAYEVFLKCFEKGLMIRYTGDILALSP 418 (442)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCCcc------hhHHHHHHHHHHCCcEEEecCCEEEEeC
Confidence 9999999999999999885578889999999999999964321110 1245577889999999998888999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Q 010250 481 PFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 481 ~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
|+++|++|||+++++|+++++++
T Consensus 419 pl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 419 PLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred CCccCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998654
No 25
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-73 Score=595.71 Aligned_cols=405 Identities=26% Similarity=0.462 Sum_probs=341.4
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++++|+|+||+|||+||||.+|+|+++|||+||+|++|+++|+++....+.. ..+++...+|+++|++.++. +
T Consensus 45 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~la~~L~~~~p~-~ 122 (464)
T PRK06938 45 IPLALKRARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTL-DLTTPVKDQFVQDLFASLPE-A 122 (464)
T ss_pred CCceEEeccccEEEeCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhccccc-ccCCHHHHHHHHHHHHhCcc-c
Confidence 689999999999999999999999999999999999999999999999764322222 34678889999999998743 2
Q ss_pred C---CeEEEe-CChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC
Q 010250 162 M---AKVFFT-NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP 237 (514)
Q Consensus 162 ~---~~v~~~-~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 237 (514)
+ ++++|+ |||+|||+.|||+||.| ++|.+||.++++|||++.+++++++.+.++..+....+.+.++++|
T Consensus 123 ~~~~~~v~f~~~SGSEAve~AlklAr~~------tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p 196 (464)
T PRK06938 123 FAREAKIQFCGPTGTDAVEAALKLVKTA------TGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYP 196 (464)
T ss_pred ccccceEEEeCCCcHHHHHHHHHHHHHh------hCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCC
Confidence 2 378776 79999999999999987 5788999999999999999999998776666666544556677777
Q ss_pred CcccCCCCCCChhHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc
Q 010250 238 HYWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 315 (514)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t 315 (514)
+.+|+++.. ..+.....+++.+++++.+. +++++|+||+||+|+++|+++||++||++|+++|++||++||+|||||
T Consensus 197 ~~~~~~~~~-~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~t 275 (464)
T PRK06938 197 YDYRCPFGL-GGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQS 275 (464)
T ss_pred ccccccccC-chhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 766655432 22334445678888888643 235799999999999999999999999999999999999999999999
Q ss_pred CcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH
Q 010250 316 AFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY 395 (514)
Q Consensus 316 G~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~ 395 (514)
||||+|++|+++++|++|||+|+||+|+|| +|+|++++++++ +.+. ...|++||++||++|++++++|+++
T Consensus 276 GfGRtG~~~a~e~~gv~PDiv~~gKglggG-~PlsAv~~~~~~-~~~~-------~~~~~~T~~gnpla~Aaa~a~L~~l 346 (464)
T PRK06938 276 GFGRTGKMFAFEHAGIIPDVVVLSKAIGGS-LPLAVVVYREWL-DTWQ-------PGAHAGTFRGNQMAMAAGSATLRYI 346 (464)
T ss_pred CCCcCcHHHHHHhcCCCCCEEEeeccccCC-CceEEEeehhHh-hccC-------CCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998 899999999885 5553 2358899999999999999999999
Q ss_pred hhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCC---CCCccchHHHHHHHHHHCCcEEEe
Q 010250 396 KERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEP---FPPEWGIGAYFGAQCEKHGMLVRV 471 (514)
Q Consensus 396 ~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~Gv~~~~ 471 (514)
+++++.+++++++++|+++|+++ .+++++.++||.|+|++++|......... .+........+...|+++|+++.+
T Consensus 347 ~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~ 426 (464)
T PRK06938 347 KEHRLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILEL 426 (464)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEee
Confidence 99999999999999999999998 56899999999999999999754322111 111123456788899999999986
Q ss_pred e---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 472 S---GDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 472 ~---g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
. ++.|||.||+++|++|||+++++|++++.++.
T Consensus 427 ~g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~ 462 (464)
T PRK06938 427 GGRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAAV 462 (464)
T ss_pred cCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHHHh
Confidence 4 47899999999999999999999999997643
No 26
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-73 Score=594.46 Aligned_cols=388 Identities=30% Similarity=0.518 Sum_probs=339.0
Q ss_pred CCCeEEEeeeC-cEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc
Q 010250 81 VHPLVIEKSEG-SYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA 159 (514)
Q Consensus 81 ~~p~~~~~~~G-~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~ 159 (514)
.+|+++.+++| +|+||.|||+||||.+|+|+.+|||+||+|++|+.+|++++.+.+. ..+++...+|+++|++.++
T Consensus 62 ~~~~~~~~~~G~~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~~--~~~~~~~~~lae~L~~~~p- 138 (459)
T PRK11522 62 DYGAVEWQAGGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQ--ELLDPLRAMLAKTLAALTP- 138 (459)
T ss_pred CCCeeEEeccCeEEEEECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCccccc--ccCCHHHHHHHHHHHHhCC-
Confidence 46889999999 9999999999999999999999999999999999999998765433 2357888999999999874
Q ss_pred CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250 160 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 239 (514)
Q Consensus 160 ~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 239 (514)
.+.++++|+|||+||||.|+|+||.|+.. .+|.+||.++++|||+|.+++++++.+.++..|.+..|.+.++++++
T Consensus 139 ~~~~~v~f~~SGsEAve~AlklAr~~t~~---~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d- 214 (459)
T PRK11522 139 GKLKYSFFCNSGTESVEAALKLAKAYQSP---RGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGN- 214 (459)
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHHHhcc---CCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCC-
Confidence 45689999999999999999999988532 34779999999999999999999988777766665545444444432
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHH--hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc
Q 010250 240 WRYAHPGETEEEYSTRLANNLEDLILK--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 317 (514)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~le~li~~--~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~ 317 (514)
.+++++++.+ ..++++++||+||+||++|+++||++||++++++|++||++||+|||||||
T Consensus 215 -----------------~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~ 277 (459)
T PRK11522 215 -----------------IEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGM 277 (459)
T ss_pred -----------------HHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecC
Confidence 3566666643 234679999999999999999999999999999999999999999999999
Q ss_pred ccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh
Q 010250 318 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE 397 (514)
Q Consensus 318 gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~ 397 (514)
||+|++|+++++|+.||++|+||+|+||++|+|++++++++++.+.. +++.|++||++||++|++++++|+++++
T Consensus 278 GRtG~~~a~e~~gv~PDivt~gK~lggG~~Pigav~~~~~i~~~~~~-----~~~~~~~T~~gnp~~~Aaala~L~~i~~ 352 (459)
T PRK11522 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLE 352 (459)
T ss_pred CccchhhhhhccCCCCCEEEechhhhCCCccceeEEEcHHHHHHhcc-----CCcccCCCCCCCHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999998899999999999987753 2457899999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHhhhhhc-cCCC-ceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---
Q 010250 398 RNIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--- 472 (514)
Q Consensus 398 ~~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--- 472 (514)
+++.+++++++++|+++|+++ .++| .+.+++|.|+|++++|.+.. ....+...|+++||++.+.
T Consensus 353 ~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~~-----------~~~~i~~~l~~~Gvl~~~~~~~ 421 (459)
T PRK11522 353 QNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNE-----------IGYNFASEMFRQRVLVAGTLNN 421 (459)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCch-----------HHHHHHHHHHHCCeEEEecCCC
Confidence 899999999999999999998 4677 78999999999999997532 2456889999999999764
Q ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 010250 473 GDNIMMSPPFIMSPEEVDELISKYGKALKATEERVK 508 (514)
Q Consensus 473 g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~~ 508 (514)
++.+||.||+++|++|||+++++|+++++++.+.++
T Consensus 422 ~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~~~~~~ 457 (459)
T PRK11522 422 AKTIRIEPPLTLTIEQCEQVLKAARKALAAMRVSVE 457 (459)
T ss_pred CCEEEEECCccCCHHHHHHHHHHHHHHHHHHHHhhc
Confidence 467999999999999999999999999988776554
No 27
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=5.4e-73 Score=586.43 Aligned_cols=410 Identities=29% Similarity=0.513 Sum_probs=349.5
Q ss_pred ccCCccccccCCCCCC-eEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchH
Q 010250 68 MLAPFTAGWQSTDVHP-LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPS 146 (514)
Q Consensus 68 ~~~p~~~~~~~~~~~p-~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~ 146 (514)
.|+|+.... ...| +++++++|+|+||.|||+||||.+++|+++|||+||+|.+|+.+|++++.+.+. ...++++.
T Consensus 14 ~~~~~~~~~---~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-~~~~~~~~ 89 (429)
T PRK06173 14 IWHPYSSVT---DPIPVYPVERADGVMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMF-GGFTHEPA 89 (429)
T ss_pred ccccccccc---ccCCCceEEeceeeEEEcCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccc-cccCCHHH
Confidence 455654331 1234 468999999999999999999999999999999999999999999998765432 23467888
Q ss_pred HHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC-ccccCCCC
Q 010250 147 LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFD 225 (514)
Q Consensus 147 ~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~~~~~~ 225 (514)
.+|+++|++.++ .++++|+|++||+||||+|+|+||.|+..+++++|.+||++.++|||+|.+++++++. +.++..|.
T Consensus 90 ~~lae~L~~~~p-~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 168 (429)
T PRK06173 90 VELAQKLLEILP-PSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFN 168 (429)
T ss_pred HHHHHHHHhhCC-CCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhccc
Confidence 999999999874 4678999999999999999999999987777788999999999999999999998774 34555555
Q ss_pred CCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHhc
Q 010250 226 LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKY 304 (514)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv-~~~~G~~~p~~~~L~~l~~l~~~~ 304 (514)
+..+.+.++++|+.+. .+.+...+++.|++++.. .++++|+||+||+ ||++|+++||++||++|+++|++|
T Consensus 169 ~~~~~~~~~~~p~~~~-------~~~~~~~~l~~l~~~i~~-~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~ 240 (429)
T PRK06173 169 HSLPVQYFLPQPSIKF-------GEEWNDEAIEPLQDLLEQ-KGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQY 240 (429)
T ss_pred ccCCCCeEeCCCCccc-------chhHHHHHHHHHHHHHHh-CCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHc
Confidence 4444555566554321 133455567788888864 3468999999997 999999999999999999999999
Q ss_pred CCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHH
Q 010250 305 DILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVS 384 (514)
Q Consensus 305 gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~ 384 (514)
|++||+|||||||||+|++|+++++|+.|||+||||+|+||++|+|++++++++++.+... ..+.+.|++||++||++
T Consensus 241 g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~gK~l~gG~~p~~a~~~~~~i~~~~~~~--~~~~~~~~~T~~g~p~~ 318 (429)
T PRK06173 241 GVLLIFDEIATGFGRTGKLFALEHAGVVPDIMCIGKALTGGYLTLSATITTEAIAQTICSG--EAKCFMHGPTFMANPLA 318 (429)
T ss_pred CCeEEecchhcCCCcCCcchHHHhcCCCCCEEEeehhhhCCccccceEEecHHHHHHHhcC--CCCccccCCCCCcCHHH
Confidence 9999999999999999999999999999999999999999988999999999999988631 11346789999999999
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH
Q 010250 385 CAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK 464 (514)
Q Consensus 385 ~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 464 (514)
|++++++|++++++++.+++++++++|++.|+++.+++.+.++||.|+|+++++.+.. ....+.+.|++
T Consensus 319 ~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~~-----------~~~~i~~~l~e 387 (429)
T PRK06173 319 CAIAAESIRLLLESPWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEPV-----------NMATLQPRFVE 387 (429)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCcc-----------cHHHHHHHHHH
Confidence 9999999999998899999999999999999987567888899999999999996432 13467889999
Q ss_pred CCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 465 HGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 465 ~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+|+++.+.++.|||.||+++|++||++++++|++++.++
T Consensus 388 ~Gi~v~~~g~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 426 (429)
T PRK06173 388 HGIWVRPFGKLVYIMPPFIISPDELSQLTSGLLRVLKQE 426 (429)
T ss_pred CCeEEEecCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 999999988899999999999999999999999999764
No 28
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=1.2e-72 Score=583.08 Aligned_cols=409 Identities=27% Similarity=0.479 Sum_probs=346.9
Q ss_pred ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250 68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 147 (514)
Q Consensus 68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ 147 (514)
.|+|+.+... ...|+++++++|+|+||.|||+||||.+|+|+++|||+||+|.+|+.+|++++.+... ...+++...
T Consensus 13 ~~~~~~~~~~--~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~-~~~~~~~~~ 89 (428)
T PRK07986 13 IWHPYTSMTS--PLPVYPVVSAEGCELILADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMF-GGITHPPAI 89 (428)
T ss_pred cccCCccccc--CCCCeeEEeeeeeEEEeCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccc-cccCCHHHH
Confidence 5677654321 1234789999999999999999999999999999999999999999999998764432 123678889
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC-ccccCCCCC
Q 010250 148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDL 226 (514)
Q Consensus 148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~~~~~~~ 226 (514)
+|+++|++.++ .++++|+|++||+||||.|+|+||.|++.++ ++|.+||.++++|||.|.+++++++. +.++..|..
T Consensus 90 ~la~~L~~~~p-~~~~~v~f~~SGsEAve~AlklAr~~~~~~g-~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~ 167 (428)
T PRK07986 90 ELCRKLVAMTP-QPLECVFLADSGSVAVEVAMKMALQYWQAKG-EPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKG 167 (428)
T ss_pred HHHHHHHhhCC-CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcC-CCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCC
Confidence 99999999874 4578999999999999999999999876554 56789999999999999999998764 334444544
Q ss_pred CCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHhcC
Q 010250 227 PAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKYD 305 (514)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv-~~~~G~~~p~~~~L~~l~~l~~~~g 305 (514)
..+.+.+++.|.... .+++.+++++++++++.. .++++++||+||+ ++.+|+++|+++||++|+++|++||
T Consensus 168 ~~~~~~~~~~p~~~~-------~~~~~~~d~~~l~~~l~~-~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g 239 (428)
T PRK07986 168 YLPENLFAPAPQSRF-------DGEWDERDIAPFARLMAA-HRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREG 239 (428)
T ss_pred CCCCCEEECCCCccc-------chhhHHHHHHHHHHHHHh-CCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcC
Confidence 334444455543211 134567788899888864 3468999999996 9999999999999999999999999
Q ss_pred CEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHH
Q 010250 306 ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSC 385 (514)
Q Consensus 306 illI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~ 385 (514)
++||+|||||||||+|++|+++++|++||++|+||+|+||++|+|++++++++++.+.... .+.+.|++||++||++|
T Consensus 240 ~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~--~~~~~~~~T~~g~p~~~ 317 (428)
T PRK07986 240 ILLIADEIATGFGRTGKLFACEHAGIAPDILCLGKALTGGTMTLSATLTTREVAETISNGE--AGCFMHGPTFMGNPLAC 317 (428)
T ss_pred CEEEEeccccCCccCCCeeeecccCCCCCEEEechhhhCCcccCcchhchHHHHHHhhcCC--CCccccCCCCCcCHHHH
Confidence 9999999999999999999999999999999999999999889999999999999986421 12456899999999999
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC
Q 010250 386 AVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH 465 (514)
Q Consensus 386 aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 465 (514)
++++++|++++++++.+++++++++|++.|+++.+++.+.++||.|+++++++.++. ....+...|+++
T Consensus 318 aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~~~-----------~~~~~~~~l~~~ 386 (428)
T PRK07986 318 AVANASLSLLESGDWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVETTRPV-----------NMAALQRFFVEQ 386 (428)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEeCCcc-----------cHHHHHHHHHHC
Confidence 999999999999899999999999999999998667889999999999999996432 134578899999
Q ss_pred CcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 466 GMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 466 Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
|+++.+.|+.|||.||+++|++||++++++|++++++
T Consensus 387 Gl~~~~~g~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 387 GVWIRPFGKLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred CcEEEecCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 9999988889999999999999999999999999853
No 29
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=5.8e-73 Score=585.81 Aligned_cols=378 Identities=30% Similarity=0.507 Sum_probs=329.0
Q ss_pred CeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCC
Q 010250 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKM 162 (514)
Q Consensus 83 p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~ 162 (514)
++++.+++|+|+||.|||+||||.+|+|+++|||+||+|++|+.+|++++.+.+.. ..++...+++++|++.++ .++
T Consensus 58 ~~~~~~~~g~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~~~--~~~~~~~~lAe~L~~~~p-~~~ 134 (442)
T TIGR03372 58 AVEWQAGGLNTLIDTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQE--LLDPLRALLAKTLAALTP-GKL 134 (442)
T ss_pred eeEEEeCCeeEEEECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcccc--cCCHHHHHHHHHHHHhCC-CCc
Confidence 35567777799999999999999999999999999999999999999987654332 357888999999999874 346
Q ss_pred CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccC
Q 010250 163 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRY 242 (514)
Q Consensus 163 ~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (514)
++++|+|||+||||.|+|+||.|+.. ++|.+||+++++|||+|.+++++++.+.++..|.+..+.+.++++|+
T Consensus 135 ~~v~f~~SGsEA~e~AlklAr~~t~~---~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d---- 207 (442)
T TIGR03372 135 KYSFFCNSGTESVEAALKLAKAYQSP---RGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGD---- 207 (442)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHHhh---cCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCC----
Confidence 89999999999999999999998643 35789999999999999999999988777776765556666666553
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHH--hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250 243 AHPGETEEEYSTRLANNLEDLILK--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 320 (514)
Q Consensus 243 ~~~~~~~~~~~~~~~~~le~li~~--~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~ 320 (514)
.+++++.+.+ ..++++++||+||++|++|+++||++||++|+++|++||+++|+|||||||||+
T Consensus 208 --------------~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRt 273 (442)
T TIGR03372 208 --------------IEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRT 273 (442)
T ss_pred --------------HHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCcc
Confidence 2344444432 234689999999999999999999999999999999999999999999999999
Q ss_pred cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250 321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI 400 (514)
Q Consensus 321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~ 400 (514)
|++|+++++|+.|||+|+||+|+||++|+|++++++++++.+.. +.+.|++||++||++|++++++|++++++++
T Consensus 274 G~~~a~e~~gv~PDivt~gK~lg~G~~Pigavv~~~~i~~~~~~-----~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l 348 (442)
T TIGR03372 274 GKMFACEHEGVQPDILCLAKALGGGVMPIGATIATEAVFSVLFD-----NPFLHTTTFGGNPLACAAALATINELLEKNL 348 (442)
T ss_pred ccchhhhhcCCCCCeeeehhhhcCCcccceEEEecHHHHHhhhc-----cCccccCCCCCCHHHHHHHHHHHHHHHhccH
Confidence 99999999999999999999999998899999999999998852 2457899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhc-cCCC-ceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---CCE
Q 010250 401 VEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GDN 475 (514)
Q Consensus 401 ~~~~~~~~~~l~~~L~~l-~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~~ 475 (514)
.+++++++++|+++|+++ .+++ .+.++||.|+|++++|.++. ....+...|+++||++.+. ++.
T Consensus 349 ~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~~~-----------~~~~i~~~l~~~Gvl~~~~~~~~~~ 417 (442)
T TIGR03372 349 PAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRDNE-----------IGYAFAKELFQQNILVAGTLNNAKS 417 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEEEeCChH-----------HHHHHHHHHHHCCcEEeecCCCCCE
Confidence 999999999999999998 5677 78999999999999997532 2456889999999999754 368
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 476 IMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 476 iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
|||.||+++|++|||+++++|++++
T Consensus 418 lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 418 IRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred EEEECCcccCHHHHHHHHHHHHHhC
Confidence 9999999999999999999999864
No 30
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.8e-72 Score=581.96 Aligned_cols=407 Identities=27% Similarity=0.482 Sum_probs=343.2
Q ss_pred ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250 68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 147 (514)
Q Consensus 68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ 147 (514)
+|+|+.. ....|+++++++|+|+||.|||+||||.+++|+++|||+||+|.+|+.+|++++.+... ...+++...
T Consensus 12 ~~~~~~~----~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~-~~~~~~~~~ 86 (422)
T PRK05630 12 IWHPYAA----PGVRNRLVTSTDGVFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMF-GGLTHEPAI 86 (422)
T ss_pred cccCccc----CCCCCeeEEeceeeEEEECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCccc-CCcCCHHHH
Confidence 5566532 12378999999999999999999999999999999999999999999999998764322 123678889
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC-ccccCCCCC
Q 010250 148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDL 226 (514)
Q Consensus 148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~~~~~~~ 226 (514)
+|+++|++..+ .++++|+|++||+||||.|+|+||.|+..++.++|.+||+++++|||.|.+++++++. +.++..|.+
T Consensus 87 ~lae~L~~~~p-~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~ 165 (422)
T PRK05630 87 KLTRKLLNLTD-NGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKG 165 (422)
T ss_pred HHHHHHHhhCC-CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccc
Confidence 99999999874 4578999999999999999999999987667778899999999999999999998874 334455554
Q ss_pred CCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHhcC
Q 010250 227 PAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKYD 305 (514)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv-~~~~G~~~p~~~~L~~l~~l~~~~g 305 (514)
..+...+++.|.+.. ... .....+.+.+++++. +++|+||+||+ |+++|+++|+++||++|+++|++||
T Consensus 166 ~~~~~~~~p~~~~~~-----~~~-~~~~~~~~~~~~~~~----~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g 235 (422)
T PRK05630 166 TLPEQIFAPAPPVRG-----SSP-QEISEYLRSLELLID----ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHD 235 (422)
T ss_pred cCCCCeEcCCCcccC-----CCh-HHHHHHHHHHHHHHh----hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcC
Confidence 444445555553211 111 112334566777664 58999999996 9999999999999999999999999
Q ss_pred CEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHH
Q 010250 306 ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSC 385 (514)
Q Consensus 306 illI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~ 385 (514)
++||+|||||||||+|++|+++++|+.|||+|+||+|+||++|+|++++++++++.+.... ..+.+.|++||++||++|
T Consensus 236 ~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~-~~~~~~h~~T~~g~Pla~ 314 (422)
T PRK05630 236 ILLIADEIATGFGRTGELFATLAAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPN-GGGALMHGPTFMANPLAC 314 (422)
T ss_pred CEEEEecceeCCCcCchhhHHHhcCCCCCeeeeechhhcCccccceeeccHHHHHHHhccC-CCCccccCCCCcCCHHHH
Confidence 9999999999999999999999999999999999999999889999999999999886321 113457899999999999
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC
Q 010250 386 AVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH 465 (514)
Q Consensus 386 aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 465 (514)
++++++|++++++++.+++++++++|++.|+.+.+++.+.++||.|+++++++.++. ....+...|+++
T Consensus 315 aaa~aaL~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~~~-----------~~~~~~~~~~~~ 383 (422)
T PRK05630 315 AVAHASLEIIETGMWRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGVVEMEQPV-----------DMEEATQAAVDH 383 (422)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccccEEEEEECCcc-----------cHHHHHHHHHHC
Confidence 999999999998899999999999999999988667889999999999999996431 134577899999
Q ss_pred CcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 466 GMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 466 Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
|+++.+.++.+||.||+++|++|||+++++|++++..
T Consensus 384 Gl~~~~~g~~l~~~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 384 GVWLRPFGRLVYVMPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred CeEEEecCCEEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence 9999988889999999999999999999999999853
No 31
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-72 Score=587.78 Aligned_cols=407 Identities=28% Similarity=0.485 Sum_probs=339.7
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++++|+|+||.|||+||||.+|+|+++|||+||+|.+|+.+|+++....+.. ..+++...+++++|++.++...
T Consensus 40 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~-~~~~~~~~~lAe~L~~~~p~~~ 118 (459)
T PRK06931 40 LPLAIAKAQGVWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTL-DLTTPLKDAFSEYLLSLLPGQG 118 (459)
T ss_pred CCceEEeccccEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhcccccc-ccCCHHHHHHHHHHHHhCCCcc
Confidence 689999999999999999999999999999999999999999999999864322221 2356788999999999875321
Q ss_pred --CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250 162 --MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 239 (514)
Q Consensus 162 --~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 239 (514)
...++|+|||+||||.|||+||.| ++|.+||.++++|||++.+++++++.+.++..+.+..+.+.++++|+.
T Consensus 119 ~~~~~~f~~~SGsEAve~AlklAr~~------tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~ 192 (459)
T PRK06931 119 KEYCLQFTGPSGADAVEAAIKLAKTY------TGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHE 192 (459)
T ss_pred ccceEEEeCCCcHHHHHHHHHHHHHh------cCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCcc
Confidence 124566799999999999999988 578899999999999999999999887777767666677778888888
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHH--hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc
Q 010250 240 WRYAHPGETEEEYSTRLANNLEDLILK--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 317 (514)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~le~li~~--~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~ 317 (514)
+++++... .+.....+.+.+++.+.+ ..++++|+||+||+||++|+++|+++||++|+++|++||++||+|||||||
T Consensus 193 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGf 271 (459)
T PRK06931 193 YRCPLGIG-GEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGF 271 (459)
T ss_pred ccccccCC-chhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcC
Confidence 77765322 122222233345555542 234679999999999999999999999999999999999999999999999
Q ss_pred ccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh
Q 010250 318 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE 397 (514)
Q Consensus 318 gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~ 397 (514)
||+|++|+++++|++|||+|+||+|+|| +|+|++++++++ +.+. ...|++||++||++|++|+++|+++++
T Consensus 272 GRtG~~~a~~~~gv~PDivt~gK~l~gG-~Pi~av~~~~~~-~~~~-------~~~~~~T~~gnpla~aaala~L~~l~~ 342 (459)
T PRK06931 272 ARTGKMFAFEHAGIEPDIIVMSKAVGGG-LPLAVLGIKKEF-DAWQ-------PGGHTGTFRGNQLAMATGLTTLKILKE 342 (459)
T ss_pred CcCchHHHhhhcCCCCCEEEecccccCC-cceeeeeeHHHH-hhcc-------CCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999 899999988774 6553 235889999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCC---CCCCccchHHHHHHHHHHCCcEEEee-
Q 010250 398 RNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNE---PFPPEWGIGAYFGAQCEKHGMLVRVS- 472 (514)
Q Consensus 398 ~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~Gv~~~~~- 472 (514)
+++.+++++++++|+++|+++ .++|++.+++|.|+|++++|.++..... ..+.+......+...|+++|+++.+.
T Consensus 343 ~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~ 422 (459)
T PRK06931 343 ENLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGG 422 (459)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecC
Confidence 999999999999999999998 5789999999999999999975432211 11112234567888999999999765
Q ss_pred --CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 473 --GDNIMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 473 --g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
++.+||.||+++|++|||+++++|++++.++.+
T Consensus 423 ~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~~ 457 (459)
T PRK06931 423 RNGNVVRLLPPLLITQAECEEFIDRFEQALLAAVK 457 (459)
T ss_pred CCCCEEEEECCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence 467999999999999999999999999987543
No 32
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=4.6e-72 Score=583.40 Aligned_cols=401 Identities=26% Similarity=0.466 Sum_probs=341.6
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++++|+||||.|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.+.. ..+++...+|+++|++.++ .+
T Consensus 35 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~~-~~~~~~~~~lae~L~~~~p-~~ 112 (457)
T PRK05639 35 FPLVPKRGFGALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIG-YTHSERAIRVAEKLAEISP-IE 112 (457)
T ss_pred CCceEEeeecCEEEeCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccccC-ccCCHHHHHHHHHHHhhCC-CC
Confidence 689999999999999999999999999999999999999999999999987544322 2245778899999999874 34
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC-ccccCCCCCCCCcccccCCCCcc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDLPAPFVLHTDCPHYW 240 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
.++|+|++||+||||+|+|+||.| ++|.+||.++++|||+|.+++++++. +.++..+.+..+.+..+++|+.+
T Consensus 113 ~~~v~f~~SGsEA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 186 (457)
T PRK05639 113 NPKVLFGLSGSDAVDMAIKVSKFS------TRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPY 186 (457)
T ss_pred cCEEEEeCchHHHHHHHHHHHHHh------cCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccc
Confidence 579999999999999999999987 57889999999999999999988775 33455566555666777777666
Q ss_pred cCCCCC---CChhHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc
Q 010250 241 RYAHPG---ETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 315 (514)
Q Consensus 241 ~~~~~~---~~~~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t 315 (514)
+.+... ++.+.+...+++.+++++... .++++|+||+||+|+++|+++||++||++|+++|++||++||+|||||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~t 266 (457)
T PRK05639 187 RNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQT 266 (457)
T ss_pred cccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh
Confidence 543321 123444455567788776432 357899999999999999999999999999999999999999999999
Q ss_pred CcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH
Q 010250 316 AFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY 395 (514)
Q Consensus 316 G~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~ 395 (514)
||||+|++|+++++|++||++++||+|+|| +|+|++++++++++... + .+++|+++||++|++++++|+++
T Consensus 267 G~GrtG~~~a~~~~gv~PDiv~~gK~l~gG-~pi~av~~~~~i~~~~~------~--~~~~T~~g~p~~~aaa~a~l~~l 337 (457)
T PRK05639 267 GIGRTGKWFASEWFEVKPDLIIFGKGVASG-MGLSGVIGRKELMDLTS------G--SALLTPAANPVISAAAEATLEII 337 (457)
T ss_pred ccCcCchHHHHHhcCCCCCEEEechhhcCC-CcceeEEehHHHHhhcC------C--CcccCCCcCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 79999999999998322 1 35689999999999999999999
Q ss_pred hhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-
Q 010250 396 KERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG- 473 (514)
Q Consensus 396 ~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g- 473 (514)
+++++.+++++++++|+++|+++ .+++++.++||.|+|+++++..+... ........+...|+++|+++.+.+
T Consensus 338 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~-----~~~~~~~~~~~~~~~~Gv~~~~~g~ 412 (457)
T PRK05639 338 EEENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGK-----PDPELTGKICWRAFELGLILPSYGM 412 (457)
T ss_pred HHccHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCC-----CCHHHHHHHHHHHHhCCeEEeecCC
Confidence 99999999999999999999998 56899999999999999999653211 112245678899999999998753
Q ss_pred --CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 474 --DNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 474 --~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
+.|||.||+++|++|||+++++|+++++.+.
T Consensus 413 ~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 413 FGNVIRITPPLVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999998764
No 33
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-71 Score=579.86 Aligned_cols=401 Identities=27% Similarity=0.468 Sum_probs=344.2
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++++|+|+||.|||+||||.++ |+++|||+||+|++|+.+|++++.+... ..+++...+|+++|+++++ .+
T Consensus 54 ~~~~i~~a~G~~l~D~dG~~ylD~~g~-~~~~lGh~~p~v~~Ai~~ql~~~~~~~~--~~~~~~~~~lae~L~~~~p-~~ 129 (459)
T PRK06082 54 CLDVLASAEGIYIEDVDGKKYMDFHGN-NVHQLGYGHPHVIEKVKEQMAKLPFSPR--RFTNETAIECAEKLTEIAG-GE 129 (459)
T ss_pred CCceEEeeeeeEEEECCCCEEEEcccH-hhcccCCCCHHHHHHHHHHHHhCCCccC--ccCCHHHHHHHHHHHHhCC-CC
Confidence 578999999999999999999999854 8899999999999999999998765432 2357889999999999974 34
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
+++++|++||+||++.|+|+|+.| ++|.+||+++++|||++.+++++++.+.++..+++..+.+.+++.|..++
T Consensus 130 ~~~v~f~~sGseAve~AlklAr~~------tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (459)
T PRK06082 130 LNRVLFAPGGTSAIGMALKLARHI------TGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYR 203 (459)
T ss_pred CCEEEECCCcHHHHHHHHHHHHHh------cCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccc
Confidence 689999999999999999999988 56889999999999999999999988777777776667777788777666
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G 321 (514)
.++.. .+.+...+++++++++.+ .+++++||+||+||++ .++|+++||++|+++|++||++||+|||||||||+|
T Consensus 204 ~~~~~--~~~~~~~~~~~l~~~i~~--~~~vAavIvEPv~g~g-~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG 278 (459)
T PRK06082 204 GAFPD--ADGSDVHYADYLEYVIEK--EGGIGAFIAEAVRNTD-VQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTG 278 (459)
T ss_pred cccCC--hhHHHHHHHHHHHHHHhc--CCCEEEEEECCccCCC-CcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc
Confidence 54332 244455567888888864 2579999999999985 678899999999999999999999999999999999
Q ss_pred ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV 401 (514)
Q Consensus 322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~ 401 (514)
++|+++++|+.||++|+||+|+||++|+|++++++++++.+. ..+.| +||++||++|++++++|++++++++.
T Consensus 279 ~~fa~e~~gv~PDiv~~gKgl~gG~~P~~av~~~~~i~~~~~------~~~~~-~T~~gnpl~~aaa~a~L~~l~~~~l~ 351 (459)
T PRK06082 279 EWFTHQAYGIEPDILCIGKGLGGGLVPIAAMITKDKYNTAAQ------ISLGH-YTHEKSPLGCAAALATIEVIEQEGLL 351 (459)
T ss_pred hhhHhHhhCCCCCEEEecccccCCCCcceEEEEcHHHHhhcc------CCCCC-CCCCcCHHHHHHHHHHHHHHHhcCHH
Confidence 999999999999999999999999789999999999876543 12345 79999999999999999999988999
Q ss_pred HHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCEEEEe
Q 010250 402 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIMMS 479 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~iRi~ 479 (514)
+++++++++|+++|+++ .+++.+.++||.|+|++++|..+.....+ .......+...|+++|+++.+. ++.|||+
T Consensus 352 ~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~---~~~~~~~~~~~~~~~Gvl~~~~~~~~i~~~ 428 (459)
T PRK06082 352 EKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKER---AYDEAEAVLYRCLNNGLSFKVSQGNVIQLS 428 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCc---cHHHHHHHHHHHHhCCCEEEecCCCEEEEe
Confidence 99999999999999998 56899999999999999999754322111 1123566788999999999875 6789999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010250 480 PPFIMSPEEVDELISKYGKALKATEERV 507 (514)
Q Consensus 480 p~~~~t~e~id~~~~~l~~~l~~~~~~~ 507 (514)
||+++|++|||++++++++++.++.+++
T Consensus 429 Ppl~it~~eid~~~~~l~~~l~~~~~~~ 456 (459)
T PRK06082 429 PPLIITREELTQALAILEEAIAKICQDF 456 (459)
T ss_pred CCCccCHHHHHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999998886654
No 34
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=100.00 E-value=2e-71 Score=578.92 Aligned_cols=408 Identities=27% Similarity=0.470 Sum_probs=338.9
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC-
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS- 160 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~- 160 (514)
.|+++++++|+|+||.|||+||||.+|+|+++|||+||+|++|+.+|++++.+.+.. ..+++...+|+++|++.++..
T Consensus 21 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~-~~~~~~~~~lae~L~~~~p~~~ 99 (442)
T TIGR00709 21 LPTAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTL-DLTTPLKDAFIEALLNIIPKRK 99 (442)
T ss_pred CCceEEeccccEEEeCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCcccc-ccCcHHHHHHHHHHHHhCCCcC
Confidence 578999999999999999999999999999999999999999999999986544332 235788899999999998532
Q ss_pred -CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250 161 -KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 239 (514)
Q Consensus 161 -~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 239 (514)
....++|+|||+||||.|||+||.| ++|.+||+++++|||++.+++++++.+.++.++.+..+.+..+++|+.
T Consensus 100 ~~~~~~f~~~sGsEA~e~AlklAr~~------tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~ 173 (442)
T TIGR00709 100 MDYKLQFPGPSGADAVEAAIKLAKTY------TGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHE 173 (442)
T ss_pred CCccEEEeCCCHHHHHHHHHHHHHHh------cCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCcc
Confidence 1234566799999999999999988 568899999999999999999999876666666655566666777776
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHH--hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc
Q 010250 240 WRYAHPGETEEEYSTRLANNLEDLILK--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 317 (514)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~le~li~~--~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~ 317 (514)
++.++.. ..+.......+.+++.+.+ ..++++++||+||+|+++|+++||++||++|+++|++||++||+|||||||
T Consensus 174 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGf 252 (442)
T TIGR00709 174 YRCPFGI-GGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGF 252 (442)
T ss_pred ccccccC-CchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence 6654321 1122222233445555432 234679999999999999999999999999999999999999999999999
Q ss_pred ccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh
Q 010250 318 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE 397 (514)
Q Consensus 318 gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~ 397 (514)
||+|++|+++++|+.||++|+||+|+|| +|+|+++++++ ++.+. ...|++||++||++|++++++|+++++
T Consensus 253 GRtG~~~a~~~~gv~PDiv~~gK~l~~G-~Pigav~~~~~-~~~~~-------~~~~~~T~~gnpla~aaa~a~L~~i~~ 323 (442)
T TIGR00709 253 GRSGTMFAFEHAGIEPDFVVMSKAVGGG-LPLAVLLIAPE-FDAWQ-------PAGHTGTFRGNQLAMVTGTEALNYWKD 323 (442)
T ss_pred CCCCchhHHHHcCCCCcEEEEcccccCC-cccEEEEEchH-HhccC-------CCcCCCCCCcCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998 89999999988 45543 235789999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCC---CCCCccchHHHHHHHHHHCCcEEEee-
Q 010250 398 RNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNE---PFPPEWGIGAYFGAQCEKHGMLVRVS- 472 (514)
Q Consensus 398 ~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~Gv~~~~~- 472 (514)
+++.+++++++++|++.|+++ .+++.+.++||.|+|++++|.++..+.. +...+......+...|+++|+++.+.
T Consensus 324 ~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~ 403 (442)
T TIGR00709 324 DNLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGG 403 (442)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecC
Confidence 999999999999999999998 5789999999999999999975432211 11112234667888999999999765
Q ss_pred --CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250 473 --GDNIMMSPPFIMSPEEVDELISKYGKALKATEER 506 (514)
Q Consensus 473 --g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~ 506 (514)
++.|||.||+++|++||++++++|++++.++.+.
T Consensus 404 ~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~~~~ 439 (442)
T TIGR00709 404 REGEVFRLLCPITIDQEECEEGISRFKQAVEEALAE 439 (442)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999876443
No 35
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.9e-71 Score=578.43 Aligned_cols=399 Identities=27% Similarity=0.480 Sum_probs=334.4
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++++|+|+||.|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.. +...+++...+++++|++.++...
T Consensus 38 ~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~-~~~~~~~~~~~la~~l~~~~p~~~ 116 (443)
T PRK06058 38 LPVYVARAGGGIVEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTC-FMVTPYEGYVAVAEQLNRLTPGDH 116 (443)
T ss_pred CCceEEeeeeeEEEeCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCcc-ccccCCHHHHHHHHHHHHhCCCCC
Confidence 6889999999999999999999999999999999999999999999999865432 223357888999999999875333
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-cccCCCCCCCCcccccCCCCcc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYW 240 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
.++++|++||+|||+.|+|+||.| ++|++||+++++|||++.+++++++.. .++.++.+..+.+.++++|..+
T Consensus 117 ~~~v~f~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (443)
T PRK06058 117 EKRSALFNSGAEAVENAVKIARSY------TGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPY 190 (443)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHh------hCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCccc
Confidence 479999999999999999999988 567899999999999999999988743 3455555444555556665555
Q ss_pred cCCCC-CCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250 241 RYAHP-GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319 (514)
Q Consensus 241 ~~~~~-~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr 319 (514)
+.... ....++....+.+.+++.+ .++++|+||+||+|+++|+++|+++||++|+++|++||++||+|||||||||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgR 267 (443)
T PRK06058 191 RDPKGLATDGEEAAARAITVIEKQV---GADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFAR 267 (443)
T ss_pred ccccccccchHHHHHHHHHHHHHhh---CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 43211 1111222222334444433 2468999999999999999999999999999999999999999999999999
Q ss_pred ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 399 (514)
Q Consensus 320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~ 399 (514)
+|++|+++++|+.||++|+||+|+|| +|+|++++++++++.+.. ..|++||++||++|++++++|+++++++
T Consensus 268 tG~~fa~~~~gv~PDiv~~gK~l~~G-~Pi~av~~~~~i~~~~~~-------~~~~~T~~gnpl~~aaa~a~L~~~~~~~ 339 (443)
T PRK06058 268 TGAWFACEHEGIVPDLITTAKGIAGG-LPLSAVTGRAEIMDAPHP-------GGLGGTYGGNPVACAAALAAIETIEEDD 339 (443)
T ss_pred ChhhhHHHhcCCCCCEEEEcccccCC-CccEEEEEcHHHHhhccC-------CCCCCCCCCCHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999998 899999999999998863 2578999999999999999999999899
Q ss_pred HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---CCE
Q 010250 400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GDN 475 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~~ 475 (514)
+.+++++++++|+++|+++ .+++++.+++|.|+|+++++.++... . ........+...|+++||++.+. ++.
T Consensus 340 l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~-~---~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~ 415 (443)
T PRK06058 340 LVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGTT-E---PDAELTKALAAAAHAAGVIVLTCGTYGNV 415 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCCC-C---CcHHHHHHHHHHHHHCCeEEeccCCCCCE
Confidence 9999999999999999998 56789999999999999999754211 1 12234667888999999999864 468
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 476 IMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 476 iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
|||.||+++|++||++++++|++++++
T Consensus 416 lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 416 IRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred EEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999865
No 36
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=9.9e-71 Score=573.23 Aligned_cols=404 Identities=27% Similarity=0.486 Sum_probs=344.2
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++++|+|+||.|||+||||.+++|+.+|||+||+|.+|+.+|++++.+.+.. ...++...+++++|++.++...
T Consensus 24 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~lae~L~~~~p~~~ 102 (445)
T PRK08593 24 YPLVIDHGYGATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPA-YMYHEPLVRLAKKLCELAPGDF 102 (445)
T ss_pred CCceEEeeeeCEEEeCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCcccc-ccCCHHHHHHHHHHHHhCCCCC
Confidence 578999999999999999999999999999999999999999999999987654332 2357888999999999975332
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-cccCCCCCCCCcccccCCCCcc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYW 240 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
.++|+|++||+||||+|||+||.| ++|.+||.++++|||++.+++++++.. .++..+++..+.+.++++|+.+
T Consensus 103 ~~~v~f~~SGseA~e~AiklAr~~------tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~ 176 (445)
T PRK08593 103 EKRVTFGLSGSDANDGIIKFARAY------TGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKY 176 (445)
T ss_pred CCEEEECCchHHHHHHHHHHHHHh------hCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccc
Confidence 369999999999999999999988 568899999999999999999988854 3445566556667778888777
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHh-CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~~~-~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr 319 (514)
+.+....+ ++....+++++++++.+. .++++++||+||+++++|+++|+++||++|+++|++||++||+|||||||||
T Consensus 177 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~Gr 255 (445)
T PRK08593 177 RGMYEEPD-ANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGR 255 (445)
T ss_pred cccccCCc-HHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCc
Confidence 65433222 233344456777766542 3468999999999999999999999999999999999999999999999999
Q ss_pred ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 399 (514)
Q Consensus 320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~ 399 (514)
+|++|+++++|+.||++|+||+++|| +|+|++++++++++.+.. ..+++|+++||++|++++++|+++++++
T Consensus 256 tG~~~a~~~~gv~pDi~t~gK~l~~G-~p~gav~~~~~i~~~~~~-------~~~~~T~~~~pl~~aaa~a~l~~l~~~~ 327 (445)
T PRK08593 256 TGKWSSISHFNITPDLMSFGKSLAGG-MPMSAIVGRKEIMESLEA-------PAHLFTTGANPVSCAAALATIDMIEDES 327 (445)
T ss_pred CchHHHHHhcCCCCCEeeecccccCC-cccEEEEEcHHHHhhhcc-------CCCCCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999998 899999999999998852 2467899999999999999999999989
Q ss_pred HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCEEE
Q 010250 400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIM 477 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~iR 477 (514)
+.+++++++++|++.|+++ .+++++.+++|.|+++++++..+..... + .......+...|+++||++.+. ++.+|
T Consensus 328 l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~--~-~~~~~~~~~~~~~~~Gv~~~~~~~~~lr 404 (445)
T PRK08593 328 LLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKT--R-DNEAALKICNYCFEHGVVIIAVAGNVLR 404 (445)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCC--C-cHHHHHHHHHHHHHCCeEEeccCCCEEE
Confidence 9999999999999999998 5689999999999999999975322111 1 1224567889999999999764 57899
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 478 MSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 478 i~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
|+||+++|++||++++++|+++++++.
T Consensus 405 ~~p~l~~t~~~id~~~~~l~~~l~~~~ 431 (445)
T PRK08593 405 FQPPLVITYEQLDTALNTIEQAFTALE 431 (445)
T ss_pred EECCCccCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998764
No 37
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.6e-69 Score=563.55 Aligned_cols=412 Identities=27% Similarity=0.516 Sum_probs=347.3
Q ss_pred cccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchH
Q 010250 67 DMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPS 146 (514)
Q Consensus 67 ~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~ 146 (514)
.+|+|+..... .+.|+++++++|+|+||.|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.+. ...+++..
T Consensus 11 ~~~~~~~~~~~--~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-~~~~~~~~ 87 (423)
T PRK05964 11 HVWHPYTQMKL--HPPPIPIVRAEGAYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIF-AGFTHEPA 87 (423)
T ss_pred ceecCCCCccc--cCCCeeEEeccccEEEeCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccc-cccCCHHH
Confidence 35667654322 1368999999999999999999999999999999999999999999999998764422 13367888
Q ss_pred HHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCC
Q 010250 147 LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDL 226 (514)
Q Consensus 147 ~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~ 226 (514)
.+++++|++.++ .++++|+|++||+||||.|+|+||.|+..++.++|.+||.++++|||++.+++++++.+.++..+..
T Consensus 88 ~~la~~l~~~~p-~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~ 166 (423)
T PRK05964 88 ERLAQRLVALTP-GGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTP 166 (423)
T ss_pred HHHHHHHHHhCC-CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccC
Confidence 999999999974 3578999999999999999999999987777788999999999999999999998887655544443
Q ss_pred CCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHHHhcC
Q 010250 227 PAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKYD 305 (514)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEp-v~~~~G~~~p~~~~L~~l~~l~~~~g 305 (514)
..+.+..+++|+. ++...+++++++++.+. ++++++||+|| +++++|+++|+++||++|+++|++||
T Consensus 167 ~~~~~~~~~~~~~-----------d~~~~~~~~l~~~l~~~-~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g 234 (423)
T PRK05964 167 LLFEQVTAPFPPD-----------GYEQATLDALEALLEKH-AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHG 234 (423)
T ss_pred cCCCCEEeCCCcc-----------hhHHHHHHHHHHHHHhC-CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcC
Confidence 2233334444421 12233467888887643 46899999999 69999999999999999999999999
Q ss_pred CEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHH
Q 010250 306 ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSC 385 (514)
Q Consensus 306 illI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~ 385 (514)
++||+|||||||||+|++|+++++++.||++++||+|+||++|+|++++++++++.+.... ..+.+.|++||++||++|
T Consensus 235 ~llI~DEv~tg~gr~G~~~a~~~~~v~pDi~~~~K~l~gG~~p~~av~~~~~i~~~~~~~~-~~~~~~~~~T~~~np~~~ 313 (423)
T PRK05964 235 VLLIFDEIATGFGRTGTLFACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDD-RAKAFMHSPSYTANPLAC 313 (423)
T ss_pred CEEEEechhhCCCcCcchhHHHhcCCCCCeeeeehhhhcCcccceEEEEcHHHHHhhhcCC-cccccccCCCCCcCHHHH
Confidence 9999999999999999998999999999999999999999889999999999999885321 113456889999999999
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC
Q 010250 386 AVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH 465 (514)
Q Consensus 386 aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 465 (514)
++++++|++++++++.++++++++++++.|+++..++.+.++++.|+++++++.+.... .....+...|+++
T Consensus 314 aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~~--------~~~~~l~~~l~~~ 385 (423)
T PRK05964 314 AAANASLDLFEDEPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVLE--------RDGPALRAFALER 385 (423)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCcch--------hHHHHHHHHHHHC
Confidence 99999999999889999999999999999998866788888999999999999653210 1245688899999
Q ss_pred CcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 466 GMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 466 Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
||++.+.++.|||+||+++|++|||+++++|+++++++
T Consensus 386 Gv~v~~~~~~lR~~p~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 386 GVLLRPLGNTIYLMPPYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred CeEEEecCCEEEEeCCcccCHHHHHHHHHHHHHHHhhC
Confidence 99999888899999999999999999999999998753
No 38
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-69 Score=564.02 Aligned_cols=400 Identities=33% Similarity=0.570 Sum_probs=341.5
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++++|+|+||+|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.+. ...+++...+|+++|++.++...
T Consensus 36 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~-~~~~~~~~~~lAe~L~~~~p~~~ 114 (441)
T PRK05769 36 YPLVIERGEGVWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSL-TDFYYEPAVELAERLVEIAPGGF 114 (441)
T ss_pred CCeeEEecceEEEEeCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccC-cccCCHHHHHHHHHHHHhCCCCC
Confidence 68899999999999999999999999999999999999999999999998654322 12356788999999999875334
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC-ccccCCCCCCCCcccccCCCCcc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDLPAPFVLHTDCPHYW 240 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
+++|+|++||+||||.|+|+||.| ++|.+||.++++|||++.+++++++. +..+..|.+..+.+.++++|+.+
T Consensus 115 ~~~v~f~~SGsEA~e~AlklAr~~------tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (441)
T PRK05769 115 EKKVFFTNSGTESNEAAIKIARYH------TGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPY 188 (441)
T ss_pred CCEEEECCchHHHHHHHHHHHHHH------hCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccc
Confidence 689999999999999999999988 56889999999999999999988764 34555566556677778888777
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHH--hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLILK--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 318 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~~--~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g 318 (514)
+.++...+.+++...+++.+++++.+ ..++++++||+||+++++|+++|+++||++|+++|++||+++|+||||||||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~g 268 (441)
T PRK05769 189 RNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMG 268 (441)
T ss_pred cccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCC
Confidence 66543233444555567778884433 2457899999999999999999999999999999999999999999999999
Q ss_pred cccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc
Q 010250 319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER 398 (514)
Q Consensus 319 r~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~ 398 (514)
|+|++|+++++|+.||+++|||+++|| +|+|++++++++++.+. ..|++||++||++|++++++|+++++
T Consensus 269 r~G~~~a~~~~gv~pDivt~~K~l~~G-~p~gav~~~~~i~~~~~--------~~~~~T~~g~p~~~aaa~a~L~~l~~- 338 (441)
T PRK05769 269 RTGKMFAIEHFGVEPDIITLAKAIAGG-LPLGAVIGRAELMFLPP--------GSHANTFGGNPVAAAAALATLEELEE- 338 (441)
T ss_pred cccceehhhccCCCCCEEEEcccccCC-cccEEEEEehhhhhcCC--------CCCCCCCCcCHHHHHHHHHHHHHHHH-
Confidence 999999999999999999999999998 89999999999975432 25789999999999999999999998
Q ss_pred cHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEE
Q 010250 399 NIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNI 476 (514)
Q Consensus 399 ~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~i 476 (514)
++.+++++++++|+++|+++ .+++++.+++|.|++++++|.++.. .+ .......+...|+++|+++.+.+ +.+
T Consensus 339 ~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~--~~---~~~~~~~~~~~~~~~Gil~~~~~~~~l 413 (441)
T PRK05769 339 GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRK--EP---DPKLRDKVLYEAFKRGLLLLGAGKSAI 413 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCc--cc---cHHHHHHHHHHHHhCCcEEecCCCCEE
Confidence 99999999999999999998 5688999999999999999965421 11 11245668889999999998766 679
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 477 MMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 477 Ri~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
||+||+++|++|||+++++|++++.++
T Consensus 414 r~~p~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 414 RIIPPLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998653
No 39
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=100.00 E-value=2e-69 Score=588.84 Aligned_cols=431 Identities=24% Similarity=0.341 Sum_probs=347.7
Q ss_pred CccccCCccccccCCCCCCeEEEeeeCc----EEEeCCCC----EEEEccCCcccccCC-CCCHHHHHHHHHHHhcCCcc
Q 010250 65 GHDMLAPFTAGWQSTDVHPLVIEKSEGS----YVYDVNGK----KYLDSLAGLWCTALG-GSEPRLVAAATAQLNTLPFY 135 (514)
Q Consensus 65 ~~~~~~p~~~~~~~~~~~p~~~~~~~G~----~~~d~dG~----~ylD~~s~~~~~~lG-h~~p~v~~A~~~~l~~~~~~ 135 (514)
...+|+||++........|.+|++++|. |++|.||+ +|||+.+++|++++| |+||+|.+|+.+|++++.+.
T Consensus 322 ~~~iw~Pftq~~~~~~~~~~vi~~a~G~~~~~~~~d~~G~~~~~~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv 401 (817)
T PLN02974 322 GEVLWWPFTQHALVPRDSVTVIDSRCGEDFSVYKPKTNSTCSIVQQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHV 401 (817)
T ss_pred hhhccCCcccccccCCCCceEEEeeecCceeEEEECCCCCcccceEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCcc
Confidence 3447999999765543457899999998 99999998 999999999999999 68999999999999998776
Q ss_pred ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHH-HHHhhcCCC------------CccEEEEEec
Q 010250 136 HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVW-YYNNALGRP------------NKKKFIARQK 202 (514)
Q Consensus 136 ~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~-~~~~~~~~~------------~~~~ii~~~~ 202 (514)
+ +.+.++++..+|+++|++..+...+++|+|++||+||||.|||+|+ +|+...|.+ +|.+||.+.+
T Consensus 402 ~-~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~g 480 (817)
T PLN02974 402 M-FPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDG 480 (817)
T ss_pred c-cCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECC
Confidence 4 3355789999999999995321337899999999999999999995 476655543 5889999999
Q ss_pred CCcccceeeeecCCCccccCCCC-C-CCCcccccCCCCc--------------ccCCCCC---------------CChhH
Q 010250 203 SYHGSTLIAASLSGLPALHQKFD-L-PAPFVLHTDCPHY--------------WRYAHPG---------------ETEEE 251 (514)
Q Consensus 203 ~yHG~t~~~~~~s~~~~~~~~~~-~-~~~~~~~~~~~~~--------------~~~~~~~---------------~~~~~ 251 (514)
+|||.|++++++++.+.++..|. + ..+...+++.|.. |+..... .+.++
T Consensus 481 sYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~ 560 (817)
T PLN02974 481 SYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTP 560 (817)
T ss_pred CcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccccccccccccccccccccccccchh
Confidence 99999999999998766655442 1 1222333333322 1111000 01123
Q ss_pred HHHHHHHHHHHHHHH----hCCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccccee
Q 010250 252 YSTRLANNLEDLILK----EGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC 326 (514)
Q Consensus 252 ~~~~~~~~le~li~~----~~~~~~aavivEpv-~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~ 326 (514)
+...+.+.+++.|.+ .+++++|+||+||+ ||.||+++|+++|+++|+++|++||++||+|||+|||||+|++|++
T Consensus 561 ~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~ 640 (817)
T PLN02974 561 LAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAW 640 (817)
T ss_pred hhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhH
Confidence 344556778887764 34578999999995 8999999999999999999999999999999999999999999999
Q ss_pred cccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc----HHH
Q 010250 327 DKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN----IVE 402 (514)
Q Consensus 327 ~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~----~~~ 402 (514)
+++|++|||+|+||+|+||++|+|++++++++++.+.... ..+.+.|++||++||++|++|+++|+++++++ +.+
T Consensus 641 e~~gv~PDIi~~gKgLtgG~~Plaa~l~~~~I~~~f~~~~-~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~ 719 (817)
T PLN02974 641 ELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGPS-KLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIP 719 (817)
T ss_pred HhcCCCCCEEeecccccCCCCccEEEEEcHHHHHhhcccc-ccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 9999999999999999999889999999999999986311 11356799999999999999999999999875 445
Q ss_pred HHHHHHHHHHhhh-hhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEeeCCEEEEeC
Q 010250 403 QVNKIAPKFQDGV-KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSGDNIMMSP 480 (514)
Q Consensus 403 ~~~~~~~~l~~~L-~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g~~iRi~p 480 (514)
+.+++++++.+.| +.+.++|.+.++||.|+|++++|.++... .++ ....+..+.+.|+ ++|+++++.|+.|++.|
T Consensus 720 ~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~-~~~--~~~~a~~v~~~~~~~~Gl~~r~~Gnvi~l~p 796 (817)
T PLN02974 720 PGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSG-SGY--SSLYARSVVRRLRREDGIYARPLGNVVYLMC 796 (817)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcc-ccc--chHHHHHHHHHHHHhCCEEEEecCCEEEEeC
Confidence 5566666667777 44566899999999999999999765432 222 2234567888899 99999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q 010250 481 PFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 481 ~~~~t~e~id~~~~~l~~~l 500 (514)
|+.++++++++++++|.+.|
T Consensus 797 P~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 797 GPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred CCCCCHHHHHHHHHHHHHHh
Confidence 99999999999999998876
No 40
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=3.7e-69 Score=558.26 Aligned_cols=396 Identities=25% Similarity=0.430 Sum_probs=337.3
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++|+|+|+||+|||+||||.+|+|+++|||+||+|.+|+.+|++++.+... ...+++...+++++|++.++...
T Consensus 22 ~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~-~~~~~~~~~~la~~l~~~~p~~~ 100 (425)
T PRK07495 22 TQIYADRAENAEIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCH-QVVPYENYVRLAERLNALVPGDF 100 (425)
T ss_pred CCeeEEeeeecEEEeCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCccc-CccCCHHHHHHHHHHHHhCCCCC
Confidence 47899999999999999999999999999999999999999999999998765422 13357788999999999875322
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC-ccccCCCCCCCCcccccCCCCcc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDLPAPFVLHTDCPHYW 240 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
.++|+|++||+||||.|+|+||.| ++|.+||.++++|||++.+++++++. ..++..|.+..+.+.++++|+.+
T Consensus 101 ~~~v~f~~SGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (425)
T PRK07495 101 AKKTIFVTTGAEAVENAVKIARAA------TGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL 174 (425)
T ss_pred CCEEEECCchHHHHHHHHHHHHHh------hCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc
Confidence 479999999999999999999988 56789999999999999999888875 34556666555666677776543
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHH-hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLILK-EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~~-~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr 319 (514)
+. .+ ...+++++++++.. ..++++++||+||+++++|++++|++|+++|+++|++||+++|+||||+||||
T Consensus 175 ~g----~~----~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr 246 (425)
T PRK07495 175 HG----VS----VEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFAR 246 (425)
T ss_pred cc----cc----HHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCc
Confidence 32 11 11235667777753 24568999999999999999999999999999999999999999999999999
Q ss_pred ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 399 (514)
Q Consensus 320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~ 399 (514)
+|++|+++++++.||+++|||+|+|| +|+|++++++++++.+.. ..+++||++||++|++++++|+++++++
T Consensus 247 ~G~~~a~~~~gv~pDi~tlsK~l~~G-~pigav~~~~~i~~~~~~-------~~~~~T~~~~pl~~aaa~a~l~~l~~~~ 318 (425)
T PRK07495 247 TGKLFAMEHHEVAADLTTMAKGLAGG-FPLAAVTGRAEIMDAPGP-------GGLGGTYGGNPLGIAAAHAVLDVIEEED 318 (425)
T ss_pred CCCceeecccCCCCCEEeehhhhcCC-ccceEEEEcHHHHhccCC-------CCcCCCCCCCHHHHHHHHHHHHHHHhch
Confidence 99999999999999999999999998 799999999999988753 2577899999999999999999999889
Q ss_pred HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---CCE
Q 010250 400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GDN 475 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~~ 475 (514)
+.+++++++++|+++|+++ .++|.+.+++|.|+|++++|.+... ..+ .......+...|+++|+++.+. ++.
T Consensus 319 l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~~-~~~---~~~~~~~~~~~~~~~Gvl~~~~g~~~~~ 394 (425)
T PRK07495 319 LCERANQLGNRLKQRLASLRETVPEIADIRGPGFMNAVEFNDADS-GLP---SAEFANRVRLKALEKGLILLTCGVHGNV 394 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCceEEEEEEecCCC-CCc---cHHHHHHHHHHHHHCCeEEeecCCCCCE
Confidence 9999999999999999998 5678899999999999999975431 111 1224567888999999999764 478
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 476 IMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 476 iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
|||.||+++|++|+|+++++|+++++++.
T Consensus 395 ~r~~Ppl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 395 IRFLAPITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred EEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999997654
No 41
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=7e-68 Score=552.94 Aligned_cols=400 Identities=32% Similarity=0.521 Sum_probs=341.0
Q ss_pred CeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCC
Q 010250 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKM 162 (514)
Q Consensus 83 p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~ 162 (514)
|+++++++|+|+||+|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.+.. ...++...+|+++|+++++ .+.
T Consensus 26 ~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~-~~~~~~~~~la~~L~~~~~-~~~ 103 (433)
T PRK08117 26 NLPVVKGEGCYYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSG-VIYYESILKLAEELAEITP-GGL 103 (433)
T ss_pred CceEEeeeeeEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCcccc-ccCCHHHHHHHHHHHHhCC-CCC
Confidence 48899999999999999999999999999999999999999999999987554321 2356788999999999974 456
Q ss_pred CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC-ccccCCCCCCCCcccccCCCCccc
Q 010250 163 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 163 ~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
++++|+|||+|||+.|||+||.| ++|.+||.++++|||++.+++++++. +.++..+.+..+.+.++++|+.++
T Consensus 104 ~~v~f~~SGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (433)
T PRK08117 104 DCFFFSNSGAEAIEGALKLAKHV------TKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDR 177 (433)
T ss_pred CEEEEeCcHHHHHHHHHHHHHHh------cCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCcccc
Confidence 89999999999999999999988 56889999999999999999887764 444455555456667777776665
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHH-hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILK-EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 320 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~-~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~ 320 (514)
.+.. ...+.+..++++++++++.+ ..++++++||+||+++++|+++|+++||++|+++|++||++||+||||+||||+
T Consensus 178 ~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~ 256 (433)
T PRK08117 178 CPKG-EDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRT 256 (433)
T ss_pred cccc-CchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCcc
Confidence 4322 22344555678888888865 234689999999999999999999999999999999999999999999999999
Q ss_pred cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250 321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI 400 (514)
Q Consensus 321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~ 400 (514)
|++++++++|+.||++|+||+|++| +|+|++++++++++.+.. ..+++||++||++|++++++|+.++++++
T Consensus 257 G~~~~~~~~gv~pDi~t~sK~lg~G-~pigav~~~~~i~~~~~~-------~~~~~T~~~np~~~aaa~a~L~~l~~~~l 328 (433)
T PRK08117 257 GEWFAAQTFGVVPDIMTIAKGIASG-LPLSAVVASKELMEQWPL-------GSHGTTFGGNPVACAAALATLEVIKEEKL 328 (433)
T ss_pred ccchhHhhcCCCCCEeehhhhccCC-CcceeEEEcHHHHhhccC-------CCCCCCCCcCHHHHHHHHHHHHHHHhccH
Confidence 9988889999999999999999988 899999999999988752 25788999999999999999999988899
Q ss_pred HHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CEE
Q 010250 401 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNI 476 (514)
Q Consensus 401 ~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~i 476 (514)
.++++++++++++.|+++ .+++++.+++|.|++++++|.++.. . .+......+.+.|+++|+++.+.+ +.+
T Consensus 329 ~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~--~---~~~~~~~~~~~~l~~~Gv~~~~~g~~~~~l 403 (433)
T PRK08117 329 LDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDG--E---PDGDAVEKILDKCLEKGLLFYLCGNAGNVL 403 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCC--C---cchHHHHHHHHHHHHCCCEEeecCCCCCEE
Confidence 999999999999999988 5678888999999999999975431 1 111235567889999999987643 689
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 477 MMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 477 Ri~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
||+||+.+|+++|++++++|+++++++.
T Consensus 404 Rl~p~~~~t~~~i~~~~~~l~~~l~~~~ 431 (433)
T PRK08117 404 RMIPPLTVTKEEIDEGLDILDEALTEYE 431 (433)
T ss_pred EEeCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999997664
No 42
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=5.1e-68 Score=546.91 Aligned_cols=383 Identities=31% Similarity=0.534 Sum_probs=332.1
Q ss_pred CCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC
Q 010250 81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 160 (514)
Q Consensus 81 ~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~ 160 (514)
+.|+++++++|+|+||+|||+||||.+++|+++|||+||+|.+|+.+|++++.+.... ..+++..+++++|++..+
T Consensus 21 ~~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~la~~L~~~~~-- 96 (408)
T PRK04612 21 PRQVVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNV--FYSAPPLKLAEELVTASR-- 96 (408)
T ss_pred CCCceEEEeeeCEEEECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccc--cCCHHHHHHHHHHHhhCC--
Confidence 3788999999999999999999999999999999999999999999999987554332 256778999999999864
Q ss_pred CCCeEEEeCChhHHHHHHHHHHHHHHhhcCC-CCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250 161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGR-PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 239 (514)
Q Consensus 161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~-~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 239 (514)
..++|+|++||+||||.|+|+||.|+..+++ ++|.+||.++++|||++.+++++++.+.++..+.+..+.+.++++++
T Consensus 97 ~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d- 175 (408)
T PRK04612 97 FAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFND- 175 (408)
T ss_pred CCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCC-
Confidence 2479999999999999999999999766664 45778999999999999999999988777666653333333333321
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250 240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319 (514)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr 319 (514)
.+.+++++. ++++++||+||+++++|++.|+++||++|+++|++||+++|+||||+||||
T Consensus 176 -----------------~~~l~~~~~---~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr 235 (408)
T PRK04612 176 -----------------VEALEAAMA---GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGR 235 (408)
T ss_pred -----------------HHHHHHhhC---CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 366776663 468999999999999999999999999999999999999999999999999
Q ss_pred ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 399 (514)
Q Consensus 320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~ 399 (514)
+|.+++.+++++.||+++|||++++| +|+|++++++++++.+.. ..+++||++||++|+++.++|+++++++
T Consensus 236 ~G~~~a~~~~~~~pdi~t~~K~l~~G-~piga~~~~~~~~~~~~~-------~~~~~t~~~~p~~~aaa~a~L~~~~~~~ 307 (408)
T PRK04612 236 TGTLFAHWQEQVTPDIVTLAKALGGG-FPIGAMLAGPKVAETMQF-------GAHGTTFGGNPLAAAVARVALRKLASPQ 307 (408)
T ss_pred CCchhhhhhcCCCCCEEEEcchhcCC-CceEEEEECHHHHhhhcC-------CCcCCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 99988888889999999999999988 899999999999888752 2577899999999999999999999899
Q ss_pred HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEE
Q 010250 400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIM 477 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iR 477 (514)
+.+++++++++|+++|+++ .+++++.+++|.|+|++++|..... .....+.+.|+++|+++.+.+ +.||
T Consensus 308 l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~~---------~~a~~i~~~l~~~Gvlv~~~g~~~lR 378 (408)
T PRK04612 308 IAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAHA---------GQAGAILDLAAEHGLLLLQAGPDVLR 378 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCchh---------hHHHHHHHHHHHCCeEEeeCCCCEEE
Confidence 9999999999999999998 5678999999999999999963211 124568889999999998876 7899
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 478 MSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 478 i~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
+.||+.+|++||++++++|++++.++..
T Consensus 379 l~Ppl~it~eeid~~l~~l~~~l~~~~~ 406 (408)
T PRK04612 379 FVPALNLTDAELADGLARLRLALADYVA 406 (408)
T ss_pred EcCCccCCHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999977543
No 43
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=1.1e-67 Score=549.05 Aligned_cols=399 Identities=26% Similarity=0.450 Sum_probs=337.7
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
+|+++++++|+|+||+|||+||||.+|+|+++|||+||+|.+|+.+|++++.+... ...+++...+++++|++.++..+
T Consensus 15 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~-~~~~~~~~~~la~~l~~~~p~~~ 93 (420)
T TIGR00700 15 LPVFAARAEGAILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCF-MVTPYEGYVALAEKLNRIAPGSG 93 (420)
T ss_pred CCeeEEeeeeeEEEeCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccc-cccCChHHHHHHHHHHHhCCCCC
Confidence 68999999999999999999999999999999999999999999999998754322 12356778999999999885445
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-cccCCCCCCCCcccccCCCCcc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYW 240 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
.++|+|++||+||||.|+|+||.| ++|.+||.++++|||+|.+++++++.. .++.++++..+.+.++++|+.+
T Consensus 94 ~~~v~f~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (420)
T TIGR00700 94 PKKSVFFNSGAEAVENAVKIARSY------TGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPY 167 (420)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHh------cCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccc
Confidence 689999999999999999999988 567899999999999999999888753 3555666555666667777655
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHH-HhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLIL-KEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~-~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr 319 (514)
+..... ....+ ..+++.+++++. ...++++|+||+||+|+++|+++|+++|+++|+++|++||+++|+||||+||||
T Consensus 168 ~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr 245 (420)
T TIGR00700 168 RDGLLD-KQLST-DGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFAR 245 (420)
T ss_pred cccccc-cchhH-HHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcc
Confidence 543221 11222 234667777764 234678999999999999999999999999999999999999999999999999
Q ss_pred ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 399 (514)
Q Consensus 320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~ 399 (514)
+|++++++++++.||+++|||++++| +|+|++++++++++.+.. ..+++||++||++|++++++|+++++++
T Consensus 246 ~g~~~a~~~~~~~pDi~~lsK~l~~G-~pig~v~~~~~i~~~~~~-------~~~~~T~~~~pl~~aaa~a~l~~l~~~~ 317 (420)
T TIGR00700 246 TGAMFACEHEGPEPDLITTAKSLADG-LPLSGVTGRAEIMDAPAP-------GGLGGTYAGNPLACAAALAVLAIIESEG 317 (420)
T ss_pred cchhHHHhhcCCCCCEEEeeccccCC-cceEEEEecHHHHhhcCC-------CCcCCCCCcCHHHHHHHHHHHHHHHhcc
Confidence 99988999999999999999999988 899999999999988852 2578899999999999999999999889
Q ss_pred HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---CCE
Q 010250 400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GDN 475 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~~ 475 (514)
+.++++++++++++.|+++ ..++.+..+++.|++++++|.+... .. .....+..+.+.|+++||++.+. ++.
T Consensus 318 ~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~-~~---~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~ 393 (420)
T TIGR00700 318 LIERARQIGRLVTDRLTTLKAVDPRIGDVRGLGAMIAVELVDPGT-TE---PDAGLAERIATAAHAAGLLLLTCGMFGNI 393 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCEEEeeccceEEEEEEecCCC-CC---ccHHHHHHHHHHHHHCCeEEeccCCCCCE
Confidence 9999999999999999988 5678888999999999999964311 11 11234667888889999999875 468
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 476 IMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 476 iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
|||+||+++|+++|++++++|++++.
T Consensus 394 lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 394 IRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred EEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 99999999999999999999998874
No 44
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=3.8e-68 Score=550.35 Aligned_cols=388 Identities=24% Similarity=0.388 Sum_probs=315.7
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHH--HhcCCccccccccCCchHHHHHHHHHH----
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQ--LNTLPFYHSFWNRTTKPSLDLAKELLE---- 155 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~--l~~~~~~~~~~~~~~~~~~ela~~L~~---- 155 (514)
+|+++++++|+||||+|||+||||++++|+++|||+||+|++|+.+| ...+.+.+ ...+++..+++++|.+
T Consensus 40 ~p~~~~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~---~~~~~~~~~la~~l~~~l~~ 116 (464)
T TIGR00699 40 FLADYEKSRGNYLVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRP---ALGNFPSKDWAKILKEGILK 116 (464)
T ss_pred cceEEEecccCEEEeCCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcccc---cCCcHHHHHHHHHHHHhHHh
Confidence 78999999999999999999999999999999999999999999985 33433322 2345677889999855
Q ss_pred hcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCC-------------------CC--ccEEEEEecCCcccceeeeec
Q 010250 156 MFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGR-------------------PN--KKKFIARQKSYHGSTLIAASL 214 (514)
Q Consensus 156 ~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~-------------------~~--~~~ii~~~~~yHG~t~~~~~~ 214 (514)
.+ +.++++|+|+|||+||||+|||+|+.|+...++ ++ |.+||.|.++|||+|.+++++
T Consensus 117 ~~-p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~ 195 (464)
T TIGR00699 117 VA-PKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLST 195 (464)
T ss_pred hC-CCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHh
Confidence 44 346789999999999999999999988653321 12 348999999999999999999
Q ss_pred CCCccccCCCCCCCCcccccCCCCcccCCCCC--CChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChh
Q 010250 215 SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPG--ETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPAT 292 (514)
Q Consensus 215 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~ 292 (514)
++.+.++.. +.+.+.+.++++|. ++++... ...+.+..++++++++++.+ .++++||||+||+++++|+++|+++
T Consensus 196 t~~~~~~~~-~~~~~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~l~~l~~~l~~-~~~~iAAvI~EPv~g~~G~~~~~~~ 272 (464)
T TIGR00699 196 TRSKPIHKL-DIPAFDWPQAPFPS-LKYPLEEHVKENAKEEQRCLEEVEDLIKK-WHKPVAAIIVEPIQSEGGDNHASPD 272 (464)
T ss_pred cCCcccccc-CCCCCCceecCCCC-cccccccccccchhHHHHHHHHHHHHHHh-cCCcEEEEEEeCCCCCCCCcCCCHH
Confidence 887544433 33334445666664 3332211 11133455678888888864 3467999999999999999999999
Q ss_pred HHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCC--Cchhchhhhhc-CCcccceeEEeCHHHHHHhhhccCCC
Q 010250 293 YFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK--PDLVSFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTL 369 (514)
Q Consensus 293 ~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~--pDiv~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~ 369 (514)
||++|+++|++||++||+|||||||||+|.+|+++++|+. ||++|+||+|+ || +++ .+ +. +.. .
T Consensus 273 yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~gK~lg~gG-~~~----~~-~~---~~~----~ 339 (464)
T TIGR00699 273 FFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFSKKFQTAG-YFF----HD-PA---FRP----N 339 (464)
T ss_pred HHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEehhhhccCC-ccc----cc-hh---ccC----C
Confidence 9999999999999999999999999999999999999997 99999999996 55 332 22 22 211 1
Q ss_pred CcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCC-ceeEEE--eeeeeEEEEEccCCCCC
Q 010250 370 GSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIR--GTGLILGTEFADNKSPN 445 (514)
Q Consensus 370 ~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~v~--g~g~~~~i~~~~~~~~~ 445 (514)
..+.|++||++||++|++++++|++++++++.+++++++++|+++|+++ .++| .+.++| |.|+|+++++.+..
T Consensus 340 ~~~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~~--- 416 (464)
T TIGR00699 340 KPYRQFNTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDEA--- 416 (464)
T ss_pred CCcccccCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCHH---
Confidence 2346889999999999999999999999999999999999999999998 5688 788999 99999999985321
Q ss_pred CCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 446 EPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 446 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
....+.+.|+++|+++.+.| +.|||.||+++|++|||+++++|++++
T Consensus 417 --------~~~~i~~~~~~~Gvl~~~~g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 417 --------KRDKLLKKARNNGVNIGGCGVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred --------HHHHHHHHHHHCCcEEecCCCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 25668899999999998876 689999999999999999999998864
No 45
>PRK08297 L-lysine aminotransferase; Provisional
Probab=100.00 E-value=9.3e-68 Score=550.08 Aligned_cols=400 Identities=24% Similarity=0.356 Sum_probs=322.2
Q ss_pred CeEEEeeeCcEEEeC-CCCEEEEccCCcccccCCCCCHHHHH--HHHHHHhcCCccc-cccccCCchHHHHHHHHHHhcC
Q 010250 83 PLVIEKSEGSYVYDV-NGKKYLDSLAGLWCTALGGSEPRLVA--AATAQLNTLPFYH-SFWNRTTKPSLDLAKELLEMFT 158 (514)
Q Consensus 83 p~~~~~~~G~~~~d~-dG~~ylD~~s~~~~~~lGh~~p~v~~--A~~~~l~~~~~~~-~~~~~~~~~~~ela~~L~~~~~ 158 (514)
++++.+++|+|+||+ |||+||||.+|+|+++|||+||+|.+ |+.+|++++.+.+ .....+++...+++++|+++..
T Consensus 27 ~~~i~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~ 106 (443)
T PRK08297 27 VLDLERSQGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLG 106 (443)
T ss_pred ceEEEeccCCEEEECCCCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcC
Confidence 344899999999996 99999999999999999999999999 9999998765321 1123467788999999999873
Q ss_pred cCCCCeEEEeCChhHHHHHHHHHHHHHHhh----cCC--CCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCccc
Q 010250 159 ASKMAKVFFTNSGSEANDTQVKLVWYYNNA----LGR--PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVL 232 (514)
Q Consensus 159 ~~~~~~v~~~~sGseA~~~Alk~a~~~~~~----~~~--~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~ 232 (514)
+.++++|+|+|||+||||.|+|+||.|+.. +++ ++|.+||.+.++|||+|.+++++++.+.....+... ....
T Consensus 107 p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~-~~~~ 185 (443)
T PRK08297 107 DPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPK-FDWP 185 (443)
T ss_pred CCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCC-CCcc
Confidence 446789999999999999999999998632 343 357899999999999999999998754333222111 1111
Q ss_pred ccCCCCcccCCCCCCC---hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEE
Q 010250 233 HTDCPHYWRYAHPGET---EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFI 309 (514)
Q Consensus 233 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI 309 (514)
+++.|.. +++++..+ .+.+..++++++++++.+ .++++++||+||+|+++|+++||++||++|+++|++||++||
T Consensus 186 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI 263 (443)
T PRK08297 186 RIDNPKL-RFPLPGEDLEEVEALEAEALAQARAAFER-HPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLI 263 (443)
T ss_pred ccCCCCC-CCCCcccccchhhHHHHHHHHHHHHHHHh-CCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 2322221 11222221 234555667888888864 457899999999999999999999999999999999999999
Q ss_pred EechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHH
Q 010250 310 ADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAI 389 (514)
Q Consensus 310 ~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~ 389 (514)
+|||||||||+|++|+++++++.||++|+||++ |+|++++++++.+....... ....|++||++||++|++++
T Consensus 264 ~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l-----~~~a~l~~~~i~~~~~~~~~--~~~~~~~T~~gnpl~~aaa~ 336 (443)
T PRK08297 264 FDEVQTGVGLTGTAWAYQQLGVRPDIVAFGKKT-----QVCGIMAGRRVDEVEDNVFA--VSSRINSTWGGNLVDMVRAR 336 (443)
T ss_pred EechhhccCccchHHHHHhcCCCCCEEEecccc-----cccceecchHHHHhhhhhcc--CccccCCCCCccHHHHHHHH
Confidence 999999999999999999999999999999997 35667777765543321000 12248899999999999999
Q ss_pred HHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCcee-EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCc
Q 010250 390 EALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIG-EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM 467 (514)
Q Consensus 390 aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~-~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 467 (514)
++|++++++++.+++++++++|+++|+++ .+++.+. +++|.|+|++++|.+.. ....+...|+++|+
T Consensus 337 a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~~~-----------~~~~~~~~l~~~Gv 405 (443)
T PRK08297 337 RILEVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLPTTA-----------DRDEVIRRLWEEGV 405 (443)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceEEEEEecCHH-----------HHHHHHHHHHHCCE
Confidence 99999999999999999999999999998 5677655 99999999999996421 24568889999999
Q ss_pred EEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 468 LVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 468 ~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
++.+.+ +.+||+||+++|++|||+++++|+++++++
T Consensus 406 l~~~~~~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 406 LVLPCGERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred EEecCCCCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 998866 579999999999999999999999998764
No 46
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-67 Score=595.70 Aligned_cols=399 Identities=27% Similarity=0.471 Sum_probs=336.6
Q ss_pred CCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC
Q 010250 81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 160 (514)
Q Consensus 81 ~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~ 160 (514)
..|+++++|+|+|+||+|||+||||.+++ .+|||+||+|++|+.+|++++...+ ...++...+++++|++.++ .
T Consensus 605 ~~p~~i~~g~G~~l~D~dG~~ylD~~~g~--~~lGH~hp~v~~Ai~~q~~~l~~~~---~~~~~~~~~lAe~L~~~~p-~ 678 (1013)
T PRK06148 605 SDPIKFVRGWGVWLIDNRGRAYLDCFNNV--CHVGHAHPRVVAAAARQAARLNTNT---RYLHDAIVAYAERLTATLP-D 678 (1013)
T ss_pred CCCceEEEeeecEEEECCCCEEEEcccCh--hhcCCCCHHHHHHHHHHHhhcCCcC---CcCCHHHHHHHHHHHHhCC-C
Confidence 37899999999999999999999999984 7899999999999999999864322 2357888999999999874 3
Q ss_pred CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC-CCcccccCCCCc
Q 010250 161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP-APFVLHTDCPHY 239 (514)
Q Consensus 161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~-~~~~~~~~~~~~ 239 (514)
++++|+|+|||+||||.|||+||.| ++|++||+++++|||+|.+++++++.. ++..+... .+.+..++.|+.
T Consensus 679 ~~~~v~f~nSGsEA~e~AlklAr~~------tGr~~ii~~~~~YHG~t~~a~s~s~~~-~~~~~~~~~~~~~~~~~~p~~ 751 (1013)
T PRK06148 679 GLTVAFFVNSGSEANSLALRLARAH------TGQRDAIVLDHAYHGTTTELIDLSPYK-FNRKGGKGRPDHVEVAEVPDS 751 (1013)
T ss_pred CcCEEEEeCCcHHHHHHHHHHHHHh------cCCCeEEEEcCCccCCCcchhhcCchh-hcccCCCCCCCCceEcCCCCc
Confidence 5789999999999999999999988 678899999999999999999988733 33333322 234445566666
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHH--hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc
Q 010250 240 WRYAHPGETEEEYSTRLANNLEDLILK--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 317 (514)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~le~li~~--~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~ 317 (514)
++.++...+ .++.....+++++++.. ..++++|+||+||+||++|+++||++||++|+++|++||+++|+|||||||
T Consensus 752 ~~~~~~~~~-~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGf 830 (1013)
T PRK06148 752 YRGPERWPD-AEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGF 830 (1013)
T ss_pred cccCCCCCh-hhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCC
Confidence 665443211 22333445667776643 234689999999999999999999999999999999999999999999999
Q ss_pred ccccc-cceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh
Q 010250 318 GRLGT-MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK 396 (514)
Q Consensus 318 gr~G~-~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~ 396 (514)
||+|+ +|+++++|+.|||+|+||+|+|| +|+|++++++++++.+.. + ..|++||++||++|++++++|++++
T Consensus 831 GRtG~~~~a~e~~gv~PDivt~gK~lggG-~Plgav~~~~ei~~~~~~-----g-~~~~~Tf~gnpla~aaa~a~L~~i~ 903 (1013)
T PRK06148 831 GRVGSHWWAFETQGVVPDIVTMGKPIGNG-HPMGAVVTTREIADSFDN-----G-MEYFNTFGGNPVSCAIGLAVLDIIE 903 (1013)
T ss_pred CCCCCcchhhhhcCCCcceeeecccccCC-cceEEEEEcHHHHhhccC-----C-CccccCCCCCHHHHHHHHHHHHHHh
Confidence 99997 89999999999999999999999 799999999999998863 1 2467999999999999999999999
Q ss_pred hccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--
Q 010250 397 ERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-- 473 (514)
Q Consensus 397 ~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-- 473 (514)
++++.+++++++++|+++|+++ .+++++.+|+|.|+|++++|..+..+..+ .......+...|+++||++.+.|
T Consensus 904 ~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~---~~~~~~~i~~~~~~~Gvl~~~~g~~ 980 (1013)
T PRK06148 904 DEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAP---ATAIARYVKNGARERGILIGTEGPH 980 (1013)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCc---cHHHHHHHHHHHHhCCeEEeccCCC
Confidence 9999999999999999999998 67899999999999999999754332221 12245678899999999998654
Q ss_pred -CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 474 -DNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 474 -~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+.|||.||+++|++|||+++++|++++.++
T Consensus 981 ~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 981 DNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred CCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999764
No 47
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-67 Score=546.60 Aligned_cols=403 Identities=28% Similarity=0.497 Sum_probs=339.9
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++++|+|+||.|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.+.. ...++...+|+++|++.++ .+
T Consensus 23 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~la~~L~~~~p-~~ 100 (443)
T PRK08360 23 YPLVPVKAENAKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPI-YGFPVEPLLLAEKLIEIAP-GD 100 (443)
T ss_pred CCceEEecceeEEEECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCcccc-ccCcHHHHHHHHHHHHhCC-CC
Confidence 688999999999999999999999999999999999999999999999987655432 2346778999999999874 34
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-cccCCCCCCCCcccccCCCCcc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYW 240 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
.++|+|+|||+||||+|||+||.| ++|.+|+.+.++|||++.+++++++.. .++..+++ .+.+.++++|+..
T Consensus 101 ~~~v~f~~sGsEAve~AlklAr~~------tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 173 (443)
T PRK08360 101 NPKVSFGLSGSDANDGAIKFARAY------TKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGE-LSDVHYIPYPDCY 173 (443)
T ss_pred CCEEEEcCCHHHHHHHHHHHHHHh------cCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCC-CCCcEEEeCCccc
Confidence 679999999999999999999988 578899999999999999998888743 34444554 3455666777665
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHh-CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~~~-~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr 319 (514)
+..... ....+..++.+.+++++... .++++++||+||+||++|++.|+++||++|+++|++||+++|+||||+||||
T Consensus 174 ~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr 252 (443)
T PRK08360 174 RCPFGK-EPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGR 252 (443)
T ss_pred cccccC-chhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 543211 11233334566677777542 3468999999999999999999999999999999999999999999999999
Q ss_pred ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 399 (514)
Q Consensus 320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~ 399 (514)
+|++++++++++.||++++||++++| +|+|++++++++++.+.. ..+++|++++|++|++++++|+.+++++
T Consensus 253 ~G~~~a~~~~~~~pDiitlsK~l~~G-~pigav~~~~~i~~~~~~-------~~~~~T~~~~p~~~aaa~a~l~~l~~~~ 324 (443)
T PRK08360 253 TGKWFAIEHFGVEPDIITLGKPLGGG-LPISATIGRAEIMDSLPP-------LAHAFTLSGNPVASAAALAVIEEIEEKN 324 (443)
T ss_pred CccchhhhhcCCCCCEEEecccccCC-ceeEEEEEcHHHHhhhcC-------CCCCCCCCcCHHHHHHHHHHHHHHHHcC
Confidence 99988888899999999999999988 899999999999998852 3477899999999999999999998889
Q ss_pred HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCEEE
Q 010250 400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIM 477 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~iR 477 (514)
+.+++++++++|++.|+++ .+++++.+++|.|+|++++|.++.....+ ....+..+...|+++|+++.+. ++.+|
T Consensus 325 l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~---~~~~~~~~~~~l~~~Gi~~~~~~~~~lr 401 (443)
T PRK08360 325 LLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKER---AYEEAAKVVWRAWELGLIVTFFSGNVLR 401 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCc---cHHHHHHHHHHHHHCCeEEeecCCCEEE
Confidence 9999999999999999988 56788999999999999999754322111 1123456888999999998764 57899
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 478 MSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 478 i~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
|+||+++|++||++++++|++++..+.+
T Consensus 402 ~~P~l~~t~~~id~~~~~l~~~l~~~~~ 429 (443)
T PRK08360 402 IQPPLTIEKEVLDEGLDILEEAIEDVEE 429 (443)
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999987653
No 48
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-67 Score=545.66 Aligned_cols=393 Identities=25% Similarity=0.425 Sum_probs=332.6
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++++|+|+||+|||+||||.+++|+++|||+||+|.+|+.+|++++.+... ...+++...+++++|++.++..+
T Consensus 22 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~-~~~~~~~~~~la~~l~~~~p~~~ 100 (421)
T PRK06777 22 CDFYAERAENATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAY-QIVPYASYVTLAERINALAPIDG 100 (421)
T ss_pred CCeeEEeeecCEEEeCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccc-cccCChHHHHHHHHHHHhCCCCC
Confidence 47899999999999999999999999999999999999999999999998754322 12356788999999999875445
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-cccCCCCCCCCcccccCCCCcc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYW 240 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
.++++|++||+||||.|+|+||.| ++|.+||.++++|||++.+++++++.. .++..+.+..+.+.++++|+..
T Consensus 101 ~~~~~f~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~ 174 (421)
T PRK06777 101 PAKTAFFTTGAEAVENAVKIARAY------TGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNEL 174 (421)
T ss_pred CceEEEeCCcHHHHHHHHHHHHHh------hCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc
Confidence 789999999999999999999987 567899999999999999999988753 3455555444445556666432
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHH-hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLILK-EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~~-~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr 319 (514)
+. .. ...+++++++++.+ ..++++++||+||+|+++|+.+++++||++|+++|++||++||+||||+||||
T Consensus 175 ~~----~~----~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr 246 (421)
T PRK06777 175 HG----VS----VEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFAR 246 (421)
T ss_pred cC----cC----HHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCcc
Confidence 21 01 12345678887754 24578999999999999999999999999999999999999999999999999
Q ss_pred ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 399 (514)
Q Consensus 320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~ 399 (514)
+|++|+++++++.||++++||++++| +|+|++++++++++.+.. ..+++||++||++|++++++|+.+++++
T Consensus 247 ~g~~~~~~~~~~~pDiv~~sK~l~~G-~pigav~~~~~i~~~~~~-------~~~~~T~~~~p~~~aaa~a~L~~~~~~~ 318 (421)
T PRK06777 247 TGKLFAMEYYDVKPDLITMAKSLGGG-MPISAVVGRAEVMDAPAP-------GGLGGTYAGNPLAVAAALAVLDVIAEEK 318 (421)
T ss_pred CCchhhhhhcCCCCCEEeeehhhcCC-CceEEEEEcHHHHhccCC-------CCCCCCCCcCHHHHHHHHHHHHHHHhcc
Confidence 99998999999999999999999988 899999999999988863 2567899999999999999999998889
Q ss_pred HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CE
Q 010250 400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DN 475 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~ 475 (514)
+.+++++++++|+++|+++ .+++.+.+++|.|+|+++++..... .. .....+..+...|+++||++.+.+ +.
T Consensus 319 l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~-~~---~~~~~~~~l~~~~~~~Gv~i~~~~~~g~~ 394 (421)
T PRK06777 319 LCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQT-GK---PSPEFTRQYQRQALEEGLLLLSCGVHGNV 394 (421)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCcc-CC---ccHHHHHHHHHHHHhCCeEEeecCCCCCE
Confidence 9999999999999999998 5678899999999999999865321 11 112346667788899999998764 68
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 476 IMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 476 iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
+||.||+++|+++|++++++|++++.
T Consensus 395 lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 395 IRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998874
No 49
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=4.9e-67 Score=548.22 Aligned_cols=405 Identities=27% Similarity=0.487 Sum_probs=339.8
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++++|+|+||+|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.... ...++...+++++|+++++...
T Consensus 36 ~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~-~~~~~~~~~la~~L~~~~p~~~ 114 (451)
T PRK06918 36 IPTFAQSANGALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFN-VMMYEPYIELAEKLAALAPGSF 114 (451)
T ss_pred CCceEEeccccEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCcccc-ccccHHHHHHHHHHHHhCCCCC
Confidence 578999999999999999999999999999999999999999999999987544221 2356888999999999985322
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC-ccccCCCCCCCCcccccCCCCcc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDLPAPFVLHTDCPHYW 240 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
.++|+|+|||+||||+|||+||.| ++|.+||.++++|||++.+++++++. +.++..|++..+.+.++++|+.+
T Consensus 115 ~~~v~f~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (451)
T PRK06918 115 DKKVLFLNSGAEAVENAVKIARKY------TKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEY 188 (451)
T ss_pred CCEEEEcCCcHHHHHHHHHHHHHH------hCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccc
Confidence 269999999999999999999988 56889999999999999999988875 34555566555666677777666
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHH-hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLILK-EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~~-~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr 319 (514)
+.+. +...+.+...+.+.+++++.. ..++++|+||+||+|+++|.++|+++|+++|+++|++||+++|+||||+||||
T Consensus 189 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr 267 (451)
T PRK06918 189 RRPE-GLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFAR 267 (451)
T ss_pred cccc-cCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCc
Confidence 5432 122233444445666666532 24578999999999999999999999999999999999999999999999999
Q ss_pred ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 399 (514)
Q Consensus 320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~ 399 (514)
+|++++++++++.||+++|||++++| +|+|++++++++++.+.. ..+++|+++||++|+++.++|+++++++
T Consensus 268 ~g~~~a~~~~~v~pDi~t~sK~l~~G-~pig~v~~~~~i~~~~~~-------~~~~~T~~g~~l~~aaa~a~l~~i~~~~ 339 (451)
T PRK06918 268 TGKYFAIEHFDVVPDLITVSKSLGAG-VPISGVIGRKEIMDESAP-------GELGGTYAGSPLGCAAALAVLDIIEKEN 339 (451)
T ss_pred cCceehhHhcCCCCCEEeeehhhcCC-CccEEEEEcHHHHhccCC-------CCcCcCCCcCHHHHHHHHHHHHHHHHCC
Confidence 99988889999999999999999988 899999999999988752 2578899999999999999999998889
Q ss_pred HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CE
Q 010250 400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DN 475 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~ 475 (514)
+.+++++++++++++|+++ .+++.+.+++|.|+++.+++..+..... + .......+...|+++||++.+.+ +.
T Consensus 340 ~~~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~G~~~~~~~~~~~~~~~--~-~~~~~~~l~~~~~~~Gvlv~~~~~~~~~ 416 (451)
T PRK06918 340 LNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRKTKE--P-DKTLTANICKEANKRGLLLLSAGTYGNV 416 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCceeeccceeEEEEEEccCCCcCC--C-cHHHHHHHHHHHHHCCeEEeecCCCCCE
Confidence 9999999999999999998 4678888999999999999863221111 1 11245678888999999998864 78
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 476 IMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 476 iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
+||+||+++|+++|++++++|+++++++.+
T Consensus 417 lrl~p~l~~t~~~id~~l~~l~~~l~~~~~ 446 (451)
T PRK06918 417 IRVLMPLVITDEQLEEGLTIIEESLQACYE 446 (451)
T ss_pred EEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999987644
No 50
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=100.00 E-value=1.4e-67 Score=548.18 Aligned_cols=387 Identities=25% Similarity=0.444 Sum_probs=328.8
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-AS 160 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~ 160 (514)
.|+++++|+|+|+||.|||+||||.+|+|+++|||+||+|.+|+++|+++..+.+.. ...++...+|+++|++.+. +.
T Consensus 21 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~-~~~~~~~~~lae~l~~~~~~~~ 99 (425)
T PRK09264 21 FPVVFDKAKGSWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGL-DMHTTAKREFLETFEETILKPR 99 (425)
T ss_pred CCccEEeeecCEEEeCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhccccccc-ccCcHHHHHHHHHHHHhhcCCc
Confidence 678999999999999999999999999999999999999999999999875544332 2356778899999999752 22
Q ss_pred CCC-eEEE-eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC
Q 010250 161 KMA-KVFF-TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH 238 (514)
Q Consensus 161 ~~~-~v~~-~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 238 (514)
+.+ +++| +|||+||||.|+|+||.| ++|.+||+++++|||+|.+++++++.+.++..++++.+.+.++++|+
T Consensus 100 ~~~~~~~f~~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~ 173 (425)
T PRK09264 100 GLDYKVQFTGPTGTNAVEAALKLARKV------TGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDG 173 (425)
T ss_pred CCCceEEEeCCCHHHHHHHHHHHHHHh------cCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCC
Confidence 344 6767 489999999999999988 57889999999999999999999988777777776666667777765
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHHHHHhC--CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC
Q 010250 239 YWRYAHPGETEEEYSTRLANNLEDLILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA 316 (514)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~le~li~~~~--~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG 316 (514)
+++. ..++++++++++.+.. ++++++||+||+|+++|+++|+++||++|+++|++||++||+||||||
T Consensus 174 ~~~~----------~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG 243 (425)
T PRK09264 174 YFGG----------DVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAG 243 (425)
T ss_pred cccc----------chhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhC
Confidence 4321 1234677888886532 357999999999999999999999999999999999999999999999
Q ss_pred cccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHH-HHH
Q 010250 317 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEAL-KIY 395 (514)
Q Consensus 317 ~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal-~~~ 395 (514)
|||+|++|+++++++.||++|+||+|++|++|+|++++++++. .+. ...+++||++||++|+++++++ +++
T Consensus 244 ~GrtG~~~~~~~~~v~PDi~t~~K~l~~~G~pigav~~~~~i~-~~~-------~~~~~~T~~gnp~~~aaa~a~l~~~~ 315 (425)
T PRK09264 244 CGRTGTFFSFERAGITPDIVTLSKSISGYGLPMALVLIKPELD-VWK-------PGEHNGTFRGNNLAFVTATAALEEYW 315 (425)
T ss_pred CccccHHHHHhhcCCCCCEEEeccccCCCccceEEEEEchhhh-ccC-------CCccCCCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999338999999998873 332 2357789999999999999999 666
Q ss_pred hhccHHHHHHHHHHHHHhhhhhc-cCCCc-eeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC
Q 010250 396 KERNIVEQVNKIAPKFQDGVKAF-SDSPI-IGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG 473 (514)
Q Consensus 396 ~~~~~~~~~~~~~~~l~~~L~~l-~~~~~-~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g 473 (514)
+++++.+++++++++|+++|+++ .+++. +.+++|.|+++++++.+.. ....+...|+++|+++.+.+
T Consensus 316 ~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~~~-----------~~~~l~~~~~~~Gv~~~~~~ 384 (425)
T PRK09264 316 SDDAFEKEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGDGE-----------LAGKIAAEAFENGLIIETSG 384 (425)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhCCCceecceecccEEEEEecChH-----------HHHHHHHHHHHCCCEEeccC
Confidence 77789999999999999999987 45664 4789999999999996421 35568899999999998754
Q ss_pred ---CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 474 ---DNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 474 ---~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
+.|||+||+++|++||++++++|+++++++.
T Consensus 385 ~~~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~~~ 418 (425)
T PRK09264 385 PEDEVVKLLPPLTIDEEELEEGLDILEEAVAEVL 418 (425)
T ss_pred CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 6799999999999999999999999998763
No 51
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=100.00 E-value=1.4e-67 Score=545.81 Aligned_cols=383 Identities=25% Similarity=0.443 Sum_probs=326.2
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-AS 160 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~ 160 (514)
.|+++++++|+|+||.|||+||||.+|+|+++|||+||+|.+|+++|+++..+.+.. ...++...+++++|++.+. +.
T Consensus 17 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~-~~~~~~~~~lae~l~~~~~~~~ 95 (412)
T TIGR02407 17 FPTVFEKAKGSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSL-DMATEAKREFLETFNEIILKPR 95 (412)
T ss_pred CCceEEecccCEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceecc-ccCcHHHHHHHHHHHHhccCcc
Confidence 678999999999999999999999999999999999999999999999875544332 2346788999999999752 22
Q ss_pred CC-CeEEE-eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC
Q 010250 161 KM-AKVFF-TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH 238 (514)
Q Consensus 161 ~~-~~v~~-~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 238 (514)
+. ++++| +|||+||||.|+|+||.| ++|++||.++++|||+|.+++++++.+.++..++++.+.+..+++|+
T Consensus 96 ~~~~~~~f~~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~ 169 (412)
T TIGR02407 96 GLDYKVQFPGPTGTNAVESALKLARKV------TGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDG 169 (412)
T ss_pred CCCceEEEeCCCchHHHHHHHHHHhhh------cCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCC
Confidence 23 35766 599999999999999987 56889999999999999999999988777777776666666666654
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHHHHHhC--CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC
Q 010250 239 YWRYAHPGETEEEYSTRLANNLEDLILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA 316 (514)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~le~li~~~~--~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG 316 (514)
+.+. ..++++.+++++.+.. .+++++||+||+|+++|+++||++||++|+++|++||++||+||||||
T Consensus 170 ~~~~----------~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG 239 (412)
T TIGR02407 170 YLGG----------DVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAG 239 (412)
T ss_pred cccc----------chhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC
Confidence 3210 1234667888876432 257999999999999999999999999999999999999999999999
Q ss_pred cccccccceecccCCCCchhchhhhhcC-CcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH-
Q 010250 317 FGRLGTMFGCDKYSIKPDLVSFAKALSS-AYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI- 394 (514)
Q Consensus 317 ~gr~G~~~~~~~~gv~pDiv~~sK~l~g-G~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~- 394 (514)
|||+|++|+++++++.||++++||+|+| | +|+|++++++++ +.+. ...+++||++||++|+++.++|++
T Consensus 240 ~GRtG~~~a~~~~~v~PDi~~~~K~lg~~G-~pigav~~~~~~-~~~~-------~~~~~~T~~gnpl~~aaa~a~l~~~ 310 (412)
T TIGR02407 240 CGRTGTFFSFEPAGIEPDIVCLSKSISGYG-LPLALTLIKPEL-DVWK-------PGEHNGTFRGNNLAFVTATAALEYY 310 (412)
T ss_pred CCccchhHHhcccCCCCCEEEechhccCCc-cceeEEEEchhh-hccC-------CCccCCCCCccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 6 899999999886 5443 236789999999999999999995
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhc-cCCC-ceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee
Q 010250 395 YKERNIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS 472 (514)
Q Consensus 395 ~~~~~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~ 472 (514)
++++++.+++++++++++++|+.+ ..++ .+.+++|.|+++++++.+.. ....+...|+++||++.+.
T Consensus 311 i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~~~-----------~~~~~~~~~~~~Gv~v~~~ 379 (412)
T TIGR02407 311 WSDDAFEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECGDGD-----------LAGKIAKAAFENGLIIETS 379 (412)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEEecChH-----------HHHHHHHHHHHCCCEEecc
Confidence 777789999999999999999987 4566 67899999999999996431 2556888999999999764
Q ss_pred C---CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 473 G---DNIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 473 g---~~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
+ +.|||+||+++|++|+++++++|+++++
T Consensus 380 ~~~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 380 GPNDEVIKLLPPLTIDEETLQQGLDILEQAVE 411 (412)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 3 6799999999999999999999999885
No 52
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=1.1e-67 Score=522.92 Aligned_cols=419 Identities=25% Similarity=0.343 Sum_probs=344.1
Q ss_pred cccccccccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhc
Q 010250 52 SSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNT 131 (514)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~ 131 (514)
.++...+..++..+...++|+++.|... ..|+++.+++|+|+||+|||+||||+.+|+...|||+||.|++|+.+|+++
T Consensus 6 ~S~~l~~~A~~~~pGGvnspvra~~~v~-~~P~fi~~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~ 84 (432)
T COG0001 6 KSEALFERAKKVIPGGVNSPVRAFKSVG-GYPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLER 84 (432)
T ss_pred chHHHHHHHhhhCCCCCCccccccCCCC-CCCeeEEeccCCeEEeCCCCEeeehhccCcccccCCCCHHHHHHHHHHHHh
Confidence 4455566678888999999999988764 699999999999999999999999999999999999999999999999998
Q ss_pred CCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee
Q 010250 132 LPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA 211 (514)
Q Consensus 132 ~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~ 211 (514)
+..+ +.+++...++++.|++.++ ..++|.|+||||||++.|||+||.| ++|++||.|+++|||+....
T Consensus 85 G~~f----g~Pte~Ei~~Aell~~~~p--~~e~vrfvnSGTEAtmsAiRlARa~------TgR~kIikF~G~YHG~~D~~ 152 (432)
T COG0001 85 GLSF----GAPTELEVELAELLIERVP--SIEKVRFVNSGTEATMSAIRLARAY------TGRDKIIKFEGCYHGHSDSL 152 (432)
T ss_pred cCCC----CCCCHHHHHHHHHHHHhcC--cccEEEEecchhHHHHHHHHHHHHh------hCCCeEEEEcCCCCCCccHH
Confidence 7433 6688999999999999985 4589999999999999999999988 78999999999999997666
Q ss_pred eecCCCccccCCCC-CCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCC
Q 010250 212 ASLSGLPALHQKFD-LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPP 290 (514)
Q Consensus 212 ~~~s~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~ 290 (514)
+.-.++..- .++ +..+.++.-.. .+.-.+..||++.+++++++. ++++|+||+||++++.|+++|.
T Consensus 153 lv~agsg~~--t~g~p~s~Gvp~~~a----------~~ti~~~yND~~al~~~~~~~-g~~IAaVIvEPv~gn~g~i~p~ 219 (432)
T COG0001 153 LVKAGSGAA--TLGSPSSPGVPADVA----------KHTLVLPYNDLEALEEAFEEY-GDDIAAVIVEPVAGNMGVVPPE 219 (432)
T ss_pred HhhcCcCcc--cCCCCCCCCCChhhh----------ccEEEecCCCHHHHHHHHHHc-CCcEEEEEeccccCCCCCCCCC
Confidence 543332110 111 11111110000 000012234567788887654 4689999999999999999999
Q ss_pred hhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCC
Q 010250 291 ATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLG 370 (514)
Q Consensus 291 ~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~ 370 (514)
++||++|++||++||++||+|||+||| |.+..+++++|||+||+.||||.++|| +|+|++.+++++|+.+.+. +
T Consensus 220 ~~Fl~~Lr~lt~e~G~lLI~DEViTGF-R~~~gGaq~~~gi~PDlttlGKiIGGG-lP~ga~gGr~eiM~~~~p~----g 293 (432)
T COG0001 220 PGFLEGLRELTEEHGALLIFDEVITGF-RVALGGAQGYYGVEPDLTTLGKIIGGG-LPIGAFGGRAEIMEQLAPL----G 293 (432)
T ss_pred HHHHHHHHHHHHHcCcEEEEecchhhc-ccCCcccccccCcCcchhhhhhhhcCC-cceeeeccHHHHHhhhCCC----C
Confidence 999999999999999999999999999 988889999999999999999999999 8999999999999988754 5
Q ss_pred cccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCC-
Q 010250 371 SFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEP- 447 (514)
Q Consensus 371 ~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~- 447 (514)
...+.+|+++||++++|++++|+.+.+ ++.++++.+++++|+++|++. .++.+...+.+.|.|+.+.|.+.......
T Consensus 294 ~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~d 373 (432)
T COG0001 294 PVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYAD 373 (432)
T ss_pred CccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHH
Confidence 678899999999999999999999987 458999999999999999987 56777778999999999999875422110
Q ss_pred -CCCccchHHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 448 -FPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 448 -~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
...+......+.+.|+++||++.|.. +..-++ ..+|+++|++.+++++++++++.
T Consensus 374 a~~sd~~~~~~~~~~~l~~GV~l~ps~~ea~flS--~ahte~di~~~~~a~~~~~~~~~ 430 (432)
T COG0001 374 AKRSDVERFAKFFHHLLNRGVYLAPSQFEAGFLS--TAHTEEDIDRTLEAADEAFKELA 430 (432)
T ss_pred HHhhchHHHHHHHHHHHhCCcccCCccccceeee--cccCHHHHHHHHHHHHHHHHHhh
Confidence 01111223445569999999999875 456677 67999999999999998887764
No 53
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=100.00 E-value=2.3e-67 Score=532.07 Aligned_cols=355 Identities=26% Similarity=0.487 Sum_probs=309.1
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++.+++|+|+||.|||+||||.+++|++++||+||+|++|+.+|++++.+... ...++...+++++|+++. +
T Consensus 6 ~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~--~~~~~~~~~la~~l~~~~---~ 80 (364)
T PRK04013 6 KRLRLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGP--MFEHEEKEEMLEELSKWV---N 80 (364)
T ss_pred CCccEEEeecCEEEECCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccC--CcCCHHHHHHHHHHHhhc---C
Confidence 67889999999999999999999999999999999999999999999998765433 235788899999999986 4
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
.++++|+|||+||++.|+|+|+.| ++|++||+++++|||++.+++++++.+.++..+.+..+.+.++++++
T Consensus 81 ~~~v~~~~SGseA~e~Alklar~~------~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d--- 151 (364)
T PRK04013 81 YEYVYMGNSGTEAVEAALKFARLY------TGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFND--- 151 (364)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHH------hCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCC---
Confidence 679999999999999999999987 56789999999999999999999988777766665444444433321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G 321 (514)
.+.+++.+. +++++||+||++|++|+++|+++||++|+++|++||++||+||||||| |+|
T Consensus 152 ---------------~~~l~~~i~----~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG 211 (364)
T PRK04013 152 ---------------VEAAKEAIT----KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTG 211 (364)
T ss_pred ---------------HHHHHHHhc----CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCC
Confidence 355666663 579999999999999999999999999999999999999999999999 999
Q ss_pred ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV 401 (514)
Q Consensus 322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~ 401 (514)
++|+++++++.||++|+||+|+|| +|+|+++.++++ . ...|++||++||++|++++++|++++++++.
T Consensus 212 ~~~a~~~~gv~PDiv~~gK~lggG-~P~~a~~~~~~~----~-------~~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~ 279 (364)
T PRK04013 212 KFLAIEHYKVEPDIVTMGKGIGNG-VPVSLTLTNFDV----E-------RGKHGSTFGGNPLACKAVAVTLRILRRERLV 279 (364)
T ss_pred chhHHHhcCCCCCEEEecccccCC-ceeEEEEecccc----c-------CCCcCCCCCcCHHHHHHHHHHHHHHHhccHH
Confidence 999999999999999999999999 899999998875 1 1258899999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEeC
Q 010250 402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSP 480 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p 480 (514)
+++++. |+++. .+.+.++||.|+|++++|... ...+...|+++|+++.+.+ +.|||.|
T Consensus 280 ~~~~~~-------l~~l~-~~~v~~vRG~Gl~~gve~~~~-------------~~~i~~~~~~~Gll~~~~g~~vlr~~P 338 (364)
T PRK04013 280 EKAGEK-------FIEIK-GERVVTTRGRGLMIGIVLKKP-------------VGKYVEELQNRGYLVHTAGQRVIRLLP 338 (364)
T ss_pred HHHHHH-------HHHhc-cCcceeeeeCcEEEEEEeCCc-------------HHHHHHHHHhCCcEEeeCCCCEEEEeC
Confidence 998875 23332 267899999999999999531 2357789999999998876 7899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Q 010250 481 PFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 481 ~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
|+++|++|+++++++|+++++++
T Consensus 339 pl~it~~~i~~~~~~l~~~l~~~ 361 (364)
T PRK04013 339 PLIISKDTMEEAKSAIEGVINDI 361 (364)
T ss_pred CcccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999764
No 54
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=100.00 E-value=1.4e-66 Score=539.73 Aligned_cols=410 Identities=30% Similarity=0.518 Sum_probs=343.1
Q ss_pred ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250 68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 147 (514)
Q Consensus 68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ 147 (514)
.|+|+..... ...++.+++++|+|+||.|||+||||.+++|+++|||+||+|++|+.+|++++.+... ...+++...
T Consensus 15 ~~~~~~~~~~--~~~~~~~~~a~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~-~~~~~~~~~ 91 (427)
T TIGR00508 15 IWHPYTSMSS--PLPVYPVESADGVELTLDDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMF-GGFTHKPAI 91 (427)
T ss_pred cccCccCccc--cCCCceEEeeeeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccc-cccCCHHHH
Confidence 4666655421 1124678999999999999999999999999999999999999999999998654322 123567889
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-cccCCCCC
Q 010250 148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDL 226 (514)
Q Consensus 148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~~~~~~~~ 226 (514)
+++++|++.++ .++++|+|++||+||++.|+|+|+.|+..++.++|.+||+|+++|||.+.+++++++.. .++..+..
T Consensus 92 ~la~~l~~~~~-~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~ 170 (427)
T TIGR00508 92 ELCQKLVKMTP-NALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKG 170 (427)
T ss_pred HHHHHHHhhCC-CCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccc
Confidence 99999999874 46789999999999999999999999877777788999999999999999999887742 23333433
Q ss_pred CCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHhcC
Q 010250 227 PAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKYD 305 (514)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv-~~~~G~~~p~~~~L~~l~~l~~~~g 305 (514)
..+....+++|.. ++ ...+.+.+++++++++.+. ++++++||+||+ +++||+++++++||++|+++|++||
T Consensus 171 ~~~~~~~~~~p~~-~~------~~~~~~~~~~~l~~~l~~~-~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~ 242 (427)
T TIGR00508 171 YLPEQIFAPAPQN-RF------DEEWNEEAITPLAKLMELH-SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYD 242 (427)
T ss_pred cCCCCeEcCCCCc-cc------cchhHHHHHHHHHHHHHhc-CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcC
Confidence 3333344444432 11 0224456678888888654 467999999998 9999999999999999999999999
Q ss_pred CEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHH
Q 010250 306 ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSC 385 (514)
Q Consensus 306 illI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~ 385 (514)
++||+||||+||||+|++|+++++++.||++++||+|+||++|++++++++++++.+.... .+.+.+++||++||++|
T Consensus 243 ~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~~gK~l~gG~~p~~a~~~~~~~~~~~~~~~--~~~~~~~~T~~g~p~~~ 320 (427)
T TIGR00508 243 ILLIADEIATGFGRTGKLFACEHAGVVPDILCVGKALTGGYMTLSATVTTDKVAQTISSGE--AGCFMHGPTFMGNPLAC 320 (427)
T ss_pred CEEEEeccccCCCcCCccchhhhcCCCCCEEEechhhhcCcccceEEEEcHHHHHHHhcCC--CCccccCCCCCcCHHHH
Confidence 9999999999999999999999999999999999999999889999999999999986421 12346889999999999
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC
Q 010250 386 AVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH 465 (514)
Q Consensus 386 aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 465 (514)
++++++|++++++++.+++++++++|+++|+++..++.+.+++|.|+++++++.+.. ....+...|+++
T Consensus 321 aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~~-----------~~~~~~~~l~~~ 389 (427)
T TIGR00508 321 AVAEASLAILLEGEWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKPV-----------NVEELQKKFVEQ 389 (427)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCcc-----------CHHHHHHHHHHC
Confidence 999999999998899999999999999999998656777899999999999996421 134688899999
Q ss_pred CcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 466 GMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 466 Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
||++.+.++.+|++||+++|++|||+++++|++++.+
T Consensus 390 Gv~~~~~~~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 390 GVWIRPFGKLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred CeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 9999988888999999999999999999999999853
No 55
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=100.00 E-value=4.5e-67 Score=543.38 Aligned_cols=393 Identities=26% Similarity=0.409 Sum_probs=333.3
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++++|+||||+|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.+. ....+++..+++++|++.++..+
T Consensus 22 ~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~-~~~~~~~~~~la~~l~~~~p~~~ 100 (421)
T PRK09792 22 CNFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAY-QIVPYESYVTLAEKINALAPVSG 100 (421)
T ss_pred CCeeEEeccccEEEeCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCccc-CccCCHHHHHHHHHHHHhCCCCC
Confidence 46899999999999999999999999999999999999999999999998754322 12367888999999999875345
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC-ccccCCCCCCCCcccccCCCCcc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDLPAPFVLHTDCPHYW 240 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
.++++|++||+||||.|+|+||.| ++|.+||.++++|||++.+++++++. +.++.++.+..+.+.++++|...
T Consensus 101 ~~~~~f~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~ 174 (421)
T PRK09792 101 QAKTAFFTTGAEAVENAVKIARAH------TGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL 174 (421)
T ss_pred CceEEEeCChHHHHHHHHHHHHHh------cCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc
Confidence 579999999999999999999987 56789999999999999999998875 33555555444445556665432
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHh-CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~~~-~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr 319 (514)
+. ....++++.+++++.+. .++++++||+||+|+++|++.++++|+++|+++|++||+++|+|||++||||
T Consensus 175 ~~--------~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr 246 (421)
T PRK09792 175 HG--------ISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFAR 246 (421)
T ss_pred cc--------ccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCC
Confidence 21 01234567788887642 3468999999999999999999999999999999999999999999999999
Q ss_pred ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 399 (514)
Q Consensus 320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~ 399 (514)
+|++++++++++.||++||||+|+|| +|+|++++++++++.+.. ..+++||++||++|++++++++++++++
T Consensus 247 ~G~~~a~~~~~~~pDi~t~gK~l~~G-~pigav~~~~~i~~~~~~-------~~~~~T~~gnpl~~aaa~a~l~~l~~~~ 318 (421)
T PRK09792 247 TGKLFAMDHYADKPDLMTMAKSLAGG-MPLSGVVGNANIMDAPAP-------GGLGGTYAGNPLAVAAAHAVLNIIDKES 318 (421)
T ss_pred CCchhHHHhcCCCCcEEEeehhhcCC-CceEEEEEcHHHHhccCC-------CCcCCCCCCCHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999998 899999999999988752 2578899999999999999999999889
Q ss_pred HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---CCE
Q 010250 400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GDN 475 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~~ 475 (514)
+.++++++++++++.|+++ .++|.+..++|.|++++++|.+... ..+ .......+...|+++|+++.+. ++.
T Consensus 319 ~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~~~-~~~---~~~~~~~l~~~~~~~Gv~i~~~g~~~~~ 394 (421)
T PRK09792 319 LCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQT-GEP---SAAIAQKIQQRALAQGLLLLTCGAYGNV 394 (421)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcceecccceEEEEEecCCcc-CCc---chHHHHHHHHHHHHCCcEEeecCCCCCE
Confidence 9999999999999999998 5688889999999999999975321 111 1123567889999999999753 378
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 476 IMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 476 iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
|||.||+++|++||++++++|++++.
T Consensus 395 irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 395 IRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred EEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999874
No 56
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=7.3e-67 Score=537.02 Aligned_cols=373 Identities=28% Similarity=0.463 Sum_probs=314.8
Q ss_pred CCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC
Q 010250 81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 160 (514)
Q Consensus 81 ~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~ 160 (514)
..|+++++++|+|+||.|||+||||.|++++++|||+||+|.+|+.+|++++.+.+. ...+++..+++++|.+..
T Consensus 17 ~~~~~~~~~~G~~~~d~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~--~~~~~~~~~la~~l~~~~--- 91 (395)
T PRK03715 17 RPDIVFTHGKGSWLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSP--AFYNEPMAKLAGLLTQHS--- 91 (395)
T ss_pred CCCceEEeeecCEEEECCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccccc--cccCHHHHHHHHHHhhcc---
Confidence 367899999999999999999999999999999999999999999999987654332 234677889999998763
Q ss_pred CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcc
Q 010250 161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW 240 (514)
Q Consensus 161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
+.++++|++||+|||+.|+|+++.|+.+ ..+++.+||+++++|||++.+++++++.+.++..+.+..+.+.+.++
T Consensus 92 ~~~~v~f~~SGseA~e~Aik~ar~~~~~-~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~---- 166 (395)
T PRK03715 92 CFDKVFFANSGAEANEGAIKLARKWGRK-HKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAEL---- 166 (395)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHhhc-cCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCC----
Confidence 4579999999999999999999988643 33577899999999999999999999876655544432222222111
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 320 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~ 320 (514)
++++++++++. +++++||+||+++++|+++|+++||++|+++|++||+++|+|||||||||+
T Consensus 167 --------------~d~~~l~~~l~----~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRt 228 (395)
T PRK03715 167 --------------NDIASVEKLIT----DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRT 228 (395)
T ss_pred --------------chHHHHHHHcC----CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCC
Confidence 23566776663 469999999999999999999999999999999999999999999999999
Q ss_pred cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250 321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI 400 (514)
Q Consensus 321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~ 400 (514)
|++|+++++++.||++|+||+|+|| +|+|+++++++++. +. ...|++||++||++|++++++|++++++++
T Consensus 229 G~~~a~~~~gv~PDi~t~gK~lg~G-~p~~av~~~~~i~~-~~-------~~~~~~T~~g~pl~~aaala~L~~l~~~~l 299 (395)
T PRK03715 229 GTLFAYELSGIEPDIMTLGKGIGGG-VPLAALLAKAEVAV-FE-------AGDQGGTYNGNPLMTAVGVAVISQLLAPGF 299 (395)
T ss_pred cchhhHhhcCCCCceeeehhhhhCC-cceEEEEEcccccc-cc-------CCCcCCCCCCCHHHHHHHHHHHHHHHhccH
Confidence 9999999999999999999999999 89999999999863 22 125788999999999999999999998899
Q ss_pred HHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC---CcEEEee-CCE
Q 010250 401 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH---GMLVRVS-GDN 475 (514)
Q Consensus 401 ~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---Gv~~~~~-g~~ 475 (514)
.+++++++++|+++|+++ .+++ +.+++|.|+|+++++.++. ...+.+.+.+. |+++... ++.
T Consensus 300 ~~~~~~~g~~l~~~L~~l~~~~~-i~~vrG~Glm~~i~l~~~~------------~~~~~~~~~~~~~~Gi~~~~~~~~~ 366 (395)
T PRK03715 300 LEGVRARGEYLKEKLLELSEERG-LEGERGEGLLRALLLGKDI------------GPQIVEKARDMQPDGLLLNAPRPNL 366 (395)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCC-cCeEEcceeEEEEEecCch------------HHHHHHHHHhccCCCEEEeecCCCE
Confidence 999999999999999988 4455 5679999999999996531 22344555555 9998754 578
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 476 IMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 476 iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
|||+||+++|++|||+++++|+++++++
T Consensus 367 lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 367 LRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred EEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999998754
No 57
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=1.5e-66 Score=537.34 Aligned_cols=378 Identities=31% Similarity=0.554 Sum_probs=327.5
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++++|+|+||.|||+||||.+|+|+++|||+||+|.+|+.+|++++.+... +.++++..+|+++|++++ +
T Consensus 17 ~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~la~~L~~~~---~ 91 (397)
T TIGR03246 17 APFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGN--GYTNEPVLRLAKKLVDAT---F 91 (397)
T ss_pred CCceEEEeecCEEEeCCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccC--ccCCHHHHHHHHHHHhhC---C
Confidence 68899999999999999999999999999999999999999999999988543322 235678899999999986 3
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
.++++|++||+|||+.|+|+||.|+..++.++|.+||+++++|||++.+++++++.+.++..|.+..+.+.+++++
T Consensus 92 ~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 167 (397)
T TIGR03246 92 ADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYN---- 167 (397)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCC----
Confidence 4699999999999999999999987654446788999999999999999999888766665555433333333322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G 321 (514)
+.+++++++. +++++||+||+++++|+++|+++||++|+++|++||+++|+||||+||||+|
T Consensus 168 --------------d~~~l~~~l~----~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G 229 (397)
T TIGR03246 168 --------------DLAAAKALIS----DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTG 229 (397)
T ss_pred --------------CHHHHHHHhc----cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccc
Confidence 2577777774 4699999999999999999999999999999999999999999999999999
Q ss_pred ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV 401 (514)
Q Consensus 322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~ 401 (514)
++++++++++.||++++||+|+|| +|+|++++++++++.+.. ..+++||++||++|++++++|+.++++++.
T Consensus 230 ~~~a~~~~gv~pDi~t~~K~lggG-~pigav~~~~~i~~~~~~-------~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~ 301 (397)
T TIGR03246 230 ELYAYMHYGVTPDILTSAKALGGG-FPIGAMLTTTEIAAHLKV-------GTHGTTYGGNPLACAVAGKVLDLVNTPELL 301 (397)
T ss_pred cchhhhhcCCCCCEEEeehhhhCC-cceeEEEEcHHHHHhccC-------CCcCCCCCCCHHHHHHHHHHHHHHhhccHH
Confidence 999999999999999999999988 899999999999988852 257789999999999999999999888899
Q ss_pred HHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEe
Q 010250 402 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMS 479 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~ 479 (514)
+++++++++|+++|+++ .+++++.+++|.|+++++++.+... .....++..|+++|+++.+.+ +.|||+
T Consensus 302 ~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~---------~~~~~~~~~l~~~Gv~~~~~g~~~lR~~ 372 (397)
T TIGR03246 302 AGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAYQ---------GKAKQFVNAAAEEGVIALIAGPNVVRFA 372 (397)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCchh---------hHHHHHHHHHHHCCeEEeecCCCEEEEe
Confidence 99999999999999988 4578888999999999999864210 125678899999999998766 679999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 480 PPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 480 p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
||+.+|++||++++++|++++.++
T Consensus 373 p~~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 373 PSLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998653
No 58
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.8e-67 Score=503.13 Aligned_cols=386 Identities=31% Similarity=0.509 Sum_probs=322.9
Q ss_pred CCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC
Q 010250 79 TDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT 158 (514)
Q Consensus 79 ~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~ 158 (514)
...+|+++.+++|+++||.||++||||++++|+..+||+||+|.+|+.+|+.++.+.. ....+....++++.|.+...
T Consensus 35 ~a~~pv~~~~gkg~kl~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~--~~~~t~eav~l~~~l~~~~~ 112 (433)
T KOG1401|consen 35 YARYPVVIESGKGSKLFDPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSS--NGYFTLEAVELEEVLSAVLG 112 (433)
T ss_pred cCCCceeeecceeeeeecCCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheecc--CccccHHHHHHHHHHHhccc
Confidence 3458899999999999999999999999999999999999999999999999976543 23344558899999999875
Q ss_pred cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC
Q 010250 159 ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH 238 (514)
Q Consensus 159 ~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 238 (514)
....++|+|+||||||||.|||+||+.+....+.++.+||.|.++|||+++++++.++...++..+++..|.+....
T Consensus 113 ~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~--- 189 (433)
T KOG1401|consen 113 KGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAE--- 189 (433)
T ss_pred CCCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecc---
Confidence 55789999999999999999999998877666666678999999999999999999988888777776555443222
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc
Q 010250 239 YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 318 (514)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g 318 (514)
.++..+++++++... +.|+|||+||+||+||.+++.++||..|+.+|+++|++||+||||||||
T Consensus 190 ---------------ynd~t~l~k~~~~h~-~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~g 253 (433)
T KOG1401|consen 190 ---------------YNDSTALEKLFESHK-GEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLG 253 (433)
T ss_pred ---------------cCCHHHHHHHHHhCC-CceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCcc
Confidence 233688999887654 5799999999999999999999999999999999999999999999999
Q ss_pred cccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc
Q 010250 319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER 398 (514)
Q Consensus 319 r~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~ 398 (514)
|+|..|++++++++|||.|++|.|+|| +|+|++++++++++.+.+.. ++.||+||++||++|.++..+|+.+.+.
T Consensus 254 R~g~~~a~e~~~~~PDI~t~aK~L~gG-lPigA~~v~~kV~~~i~~~~----~l~hg~Tf~gnpLacsa~~~~l~~l~~~ 328 (433)
T KOG1401|consen 254 RLGYGWAQEYFGVTPDITTVAKPLGGG-LPIGATGVRDKVAEMISPGD----HLYHGGTFSGNPLACSAGIKVLDELKDP 328 (433)
T ss_pred ccchHHHHHHhCcCCcceeehhhccCC-ceeEEEeehHHHHhhcCCCC----ccccCcccCCChhhhhHHHHHHHHHcCH
Confidence 999999999999999999999999999 89999999999999998643 4789999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHhhhhhc-cCCC-ceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---
Q 010250 399 NIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--- 473 (514)
Q Consensus 399 ~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--- 473 (514)
++.+++.+.++.|++.|.+. .+.+ .+...+++|+++++.+..+... +.....+.|+++.+.+
T Consensus 329 e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~~~-------------~~d~~~~~~ll~~~~~~~~ 395 (433)
T KOG1401|consen 329 ETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGPVYK-------------FADAAREQGLLILTLGKGL 395 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEeechhh-------------hhhhhhhhhHHHHHHhccc
Confidence 99999999999999999876 4444 2333489999999988754321 1222222222222211
Q ss_pred --CEEEEeC--CCCC--CHHHHHHHHHHHHHHHHHH
Q 010250 474 --DNIMMSP--PFIM--SPEEVDELISKYGKALKAT 503 (514)
Q Consensus 474 --~~iRi~p--~~~~--t~e~id~~~~~l~~~l~~~ 503 (514)
..+|+.| .+++ |+|.++++++++.+.+.++
T Consensus 396 ~~~gv~i~P~~~l~~~~~~E~i~~~l~i~~~~l~~~ 431 (433)
T KOG1401|consen 396 LEEGVRIAPIYLLTVEHTPEVIQRLLTILEKVLSAL 431 (433)
T ss_pred ccceEEEeccccccccCcHHHHHHHHHHHHHHHHHh
Confidence 3578888 4444 4889999999999888765
No 59
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=4e-66 Score=537.40 Aligned_cols=411 Identities=24% Similarity=0.319 Sum_probs=324.1
Q ss_pred cccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcccccc
Q 010250 60 TNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFW 139 (514)
Q Consensus 60 ~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~ 139 (514)
.+++.+....++++..-....+.|+++++++|+|+||.|||+||||.+++|+++|||+||+|.+|+.+|++++.+.
T Consensus 13 a~~~~p~g~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~---- 88 (428)
T PRK12389 13 ALEHIVGGVNSPSRSYKAVGGGAPVVMERGKGAYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLY---- 88 (428)
T ss_pred HHhhCCCCCCCccccccccCCCCCeEEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCcc----
Confidence 4455555443333321111124789999999999999999999999999999999999999999999999986542
Q ss_pred ccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcc
Q 010250 140 NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPA 219 (514)
Q Consensus 140 ~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~ 219 (514)
..+++...+++++|++.++ ++++|+|++||+||||.|+|+||.| ++|.+||.++++|||++.++++.++...
T Consensus 89 ~~~~~~~~~la~~l~~~~p--~~~~v~f~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~~~~~~~~ 160 (428)
T PRK12389 89 GTPTELEIEFAKMLKEAIP--SLEKVRFVNSGTEAVMTTIRVARAY------TGRTKIIKFAGCYHGHSDLVLVAAGSGP 160 (428)
T ss_pred CCCCHHHHHHHHHHHHhCC--CCcEEEEeCCHHHHHHHHHHHHHHh------hCCCEEEEECCCcCCChHHHHHhcCCcc
Confidence 3467888999999999874 4689999999999999999999988 5788999999999999999998877533
Q ss_pred ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHH
Q 010250 220 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA 299 (514)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~ 299 (514)
.+.. .+..+.+.....++..+.++ ++.+.+++++.+. ++++++||+||+|+++|+++|+++||++|++
T Consensus 161 ~~~~-~~~~~~~~~~~~~~~~~~~~----------~d~~~l~~~l~~~-~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~ 228 (428)
T PRK12389 161 STLG-TPDSAGVPKSIAQEVITVPF----------NDIEALKEALDKW-GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNE 228 (428)
T ss_pred cccC-CCCCCCCCCcccCceEEcCC----------CCHHHHHHHHHhc-CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHH
Confidence 2211 00000000000111111111 1257778777643 3689999999999999999999999999999
Q ss_pred HHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCC
Q 010250 300 VVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379 (514)
Q Consensus 300 l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~ 379 (514)
+|++||++||+||||||| |+|.+|+++++|+.||++|+||+|+|| +|+|++++++++++.+... +...|++||+
T Consensus 229 lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv~PDivt~gK~lggG-~Pi~av~~~~~i~~~~~~~----~~~~~~~T~~ 302 (428)
T PRK12389 229 LAHEAGALVIYDEVITAF-RFMYGGAQDLLGVEPDLTALGKIIGGG-LPIGAYGGRKDIMEQVAPL----GPAYQAGTMA 302 (428)
T ss_pred HHHHcCCEEEEEcccccc-ccCcchhhHHhCCCCCeeeechhhcCC-CceeEEeEHHHHHhhhccC----CCcccccCCc
Confidence 999999999999999999 999888889999999999999999999 8999999999999988531 2346889999
Q ss_pred CcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEE-EeeeeeEEEEEccCCCCCCC--CCCccchH
Q 010250 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEI-RGTGLILGTEFADNKSPNEP--FPPEWGIG 455 (514)
Q Consensus 380 ~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~--~~~~~~~~ 455 (514)
+||++|++++++|++++++++.+++++++++|+++|+++ .+++.+.++ ++.| +++++|......... ...+....
T Consensus 303 gnpl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g-~~gi~~~~~~~~~~~~~~~~~~~~~ 381 (428)
T PRK12389 303 GNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILEAAEKHGITITINRLKG-ALTVYFTDEKVTNYDQAERSDGEAF 381 (428)
T ss_pred cCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc-EEEEEEeCCCCCChhhhcccCHHHH
Confidence 999999999999999998899999999999999999988 567877777 6667 778988653211000 00122235
Q ss_pred HHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 456 AYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 456 ~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
..+...|+++|+++.+.+.. .+.||+++|++||++++++|++++++
T Consensus 382 ~~~~~~l~~~Gv~~~~~~~~-~~~~~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 382 GKFFKLMLNQGINLAPSKYE-AWFLTTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred HHHHHHHHHCCcEeecCCCC-CeeecCCCCHHHHHHHHHHHHHHHHh
Confidence 67888999999999875421 23588999999999999999999864
No 60
>PLN02624 ornithine-delta-aminotransferase
Probab=100.00 E-value=3.8e-65 Score=535.34 Aligned_cols=390 Identities=28% Similarity=0.459 Sum_probs=332.8
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++++|+|+||+|||+||||.||+++.++||+||+|++|+.+|++++.+.+.. ..++...+|+++|++++ +
T Consensus 57 ~p~~~~~a~G~~l~d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~~--~~~~~~~~la~~L~~~~---~ 131 (474)
T PLN02624 57 IPVVFSRAKGSRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRA--FYNDKFPEFAEYLTSMF---G 131 (474)
T ss_pred CCceEEeeeeCEEEECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCcccc--cCCHHHHHHHHHHHhhc---C
Confidence 689999999999999999999999999999999999999999999999987655432 35688899999999987 4
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhh-cC-CCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNA-LG-RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 239 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~-~~-~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 239 (514)
.++++|++||+|||+.|||+|+.|+.. ++ .+++.+||.++++|||++.+++++++.+.....|++..+.+.++++.
T Consensus 132 ~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-- 209 (474)
T PLN02624 132 YDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFG-- 209 (474)
T ss_pred CCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCC--
Confidence 679999999999999999999987532 22 23567899999999999999999998876666665444443333321
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250 240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319 (514)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr 319 (514)
+.+.+++++.. .++++++||+||+++++|++.|+++||++|+++|++||+++|+||||+||||
T Consensus 210 ----------------d~~~l~~~l~~-~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~Gr 272 (474)
T PLN02624 210 ----------------DLDALEKIFEE-DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLAR 272 (474)
T ss_pred ----------------CHHHHHHHHHh-CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCc
Confidence 24778887764 4468999999999999999999999999999999999999999999999999
Q ss_pred ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 399 (514)
Q Consensus 320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~ 399 (514)
+|++++++++++.||++++||++++|++|+|++++++++++.+.+ ..+++||+++|++++++.++|+.+++++
T Consensus 273 tG~~~a~~~~~i~pDiv~lsK~lggG~~pigav~~~~~i~~~~~~-------~~~~~T~~g~pl~~aaa~aaLe~l~~~~ 345 (474)
T PLN02624 273 TGKMLACDWEEVRPDVVILGKALGGGVIPVSAVLADKDVMLCIKP-------GEHGSTFGGNPLASAVAMAALQVVQDEK 345 (474)
T ss_pred CcchhhHHhcCCCCCEEEecccccCCCCcceeeeecHHHHhHhcc-------CCcCCCCCCCHHHHHHHHHHHHHHHhch
Confidence 999988899999999999999999998999999999999888752 3578899999999999999999998888
Q ss_pred HHHHHHHHHHHHHhhhhhc-cCCC-ceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEE
Q 010250 400 IVEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNI 476 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l-~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~i 476 (514)
+.+++.+++++|++.|+++ .+++ .+.+++|.|+++.+++...... ......+++.|+++||++.+.+ +.|
T Consensus 346 l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~~~-------~~~a~~~~~~L~e~GV~v~p~~~~~l 418 (474)
T PLN02624 346 LAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPKLG-------PVSAYDVCLKLKERGLLAKPTHDTII 418 (474)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCCcC-------hHHHHHHHHHHHhCCeEEecCCCCEE
Confidence 9999999999999999988 4566 5778999999999998543210 0124568888999999998865 569
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 010250 477 MMSPPFIMSPEEVDELISKYGKALKATEERVKE 509 (514)
Q Consensus 477 Ri~p~~~~t~e~id~~~~~l~~~l~~~~~~~~~ 509 (514)
||+||+.+|++||++++++|++++++-...+..
T Consensus 419 R~~p~l~~t~e~id~~l~~L~~~l~~~~~~~~~ 451 (474)
T PLN02624 419 RLAPPLSISEDELQECSKALSDVLEHDLPKLQS 451 (474)
T ss_pred EEECCccCCHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 999999999999999999999998776655544
No 61
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=100.00 E-value=1.5e-65 Score=533.17 Aligned_cols=396 Identities=22% Similarity=0.347 Sum_probs=317.6
Q ss_pred CCeE--EEeeeCcEEEeC-CCCEEEEccCCcccccCCCCCHHHH--HHHHHHHhcCCcc-ccccccCCchHHHHHHHHHH
Q 010250 82 HPLV--IEKSEGSYVYDV-NGKKYLDSLAGLWCTALGGSEPRLV--AAATAQLNTLPFY-HSFWNRTTKPSLDLAKELLE 155 (514)
Q Consensus 82 ~p~~--~~~~~G~~~~d~-dG~~ylD~~s~~~~~~lGh~~p~v~--~A~~~~l~~~~~~-~~~~~~~~~~~~ela~~L~~ 155 (514)
+|++ +++++|+|+||. |||+||||.+|+|+++|||+||+|+ +|+.+|++++.+. .......++...+++++|++
T Consensus 17 ~p~~~~~~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 96 (431)
T TIGR03251 17 FDLVLDLDRSRGSVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFAR 96 (431)
T ss_pred CceeeEEEeccCCEEEECCCCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHH
Confidence 4554 699999999996 9999999999999999999999999 9999999876432 12223356777899999998
Q ss_pred hcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhh----cCCCC--ccEEEEEecCCcccceeeeecCCCccccCCCCCCCC
Q 010250 156 MFTASKMAKVFFTNSGSEANDTQVKLVWYYNNA----LGRPN--KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAP 229 (514)
Q Consensus 156 ~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~----~~~~~--~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~ 229 (514)
..++.++++|+|+|||+||||+|+|+||.|+.+ ++++. |.+||.++++|||+|.+++++++.+.++..+.+..+
T Consensus 97 ~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~ 176 (431)
T TIGR03251 97 VLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFD 176 (431)
T ss_pred hcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCC
Confidence 863446789999999999999999999998532 34432 678999999999999999999886545544332111
Q ss_pred cccccCCCCcccCCCCC---CChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCC
Q 010250 230 FVLHTDCPHYWRYAHPG---ETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDI 306 (514)
Q Consensus 230 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gi 306 (514)
..+++.|.. +++++. ...+.+..++++++++.+.. .++++|+||+||+|+++|+++|+++||++|+++|++||+
T Consensus 177 -~~~~~~p~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~ 253 (431)
T TIGR03251 177 -WPRIDNPKL-TFPLDAPNLDQVIALEEEALRQARAAFAE-RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDA 253 (431)
T ss_pred -CccCCCCcc-cCCccccccchhhHHHHHHHHHHHHHHHh-CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 122333322 222221 11233445667788887764 457899999999999999999999999999999999999
Q ss_pred EEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHH
Q 010250 307 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA 386 (514)
Q Consensus 307 llI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~a 386 (514)
+||+|||||||||+|++|+++++|+.||++++||++ |+++++.++++.+....... ....+++||++||++|+
T Consensus 254 llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~~gK~~-----~~~g~~~~~~i~~~~~~~~~--~~~~~~~T~~gnpl~~a 326 (431)
T TIGR03251 254 LLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFGKKT-----QVCGIMAGRRVDEVADNVFA--VPSRLNSTWGGNLVDMV 326 (431)
T ss_pred EEEEecchhccCccchHHHHHhcCCCCCEEEecccC-----ccceEEecchHHHhhhhccc--CccccCCCCCCCHHHHH
Confidence 999999999999999999999999999999999996 45666676655333221000 12247889999999999
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCC-ceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH
Q 010250 387 VAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK 464 (514)
Q Consensus 387 aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 464 (514)
+++++|++++++++.+++++++++|+++|+++ .+++ ++.+++|.|+|+++++.+.. ....+...|++
T Consensus 327 aa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~-----------~~~~~~~~l~~ 395 (431)
T TIGR03251 327 RATRILEIIEEERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTA-----------DRDEVIRQLYR 395 (431)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCHH-----------HHHHHHHHHHh
Confidence 99999999998899999999999999999987 5677 88899999999999995321 24568889999
Q ss_pred CCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250 465 HGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGK 498 (514)
Q Consensus 465 ~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~ 498 (514)
+|+++.+.+ +.+||+||+.+|++|||+++++|++
T Consensus 396 ~Gvl~~~~g~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 396 EGVLLLGCGERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred CCeEEecCCCCeEEEECCccCCHHHHHHHHHHHHh
Confidence 999998866 6799999999999999999999876
No 62
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=100.00 E-value=3.9e-65 Score=528.27 Aligned_cols=380 Identities=29% Similarity=0.511 Sum_probs=327.3
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++++|+|+||.|||+||||.+++|+++|||+||+|++|+.+|++++.+... ...++...+++++|++++ +
T Consensus 21 ~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~--~~~~~~~~~la~~l~~~~---~ 95 (406)
T PRK12381 21 APFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGN--GYTNEPVLRLAKKLIDAT---F 95 (406)
T ss_pred CCceEEEeecCEEEeCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccC--ccCCHHHHHHHHHHHhhC---C
Confidence 67899999999999999999999999999999999999999999999987644322 235677889999999986 3
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
.++|+|++||+|||+.|+|+|+.|+...+.+++.+|+.++++|||++.+++++++.+.++..|.+..+.+.+++++
T Consensus 96 ~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 171 (406)
T PRK12381 96 ADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYN---- 171 (406)
T ss_pred CCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCC----
Confidence 5799999999999999999999886544445788999999999999999999998877666555433333333222
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G 321 (514)
+++++++++. +++++||+||+++++|+++|+++||++|+++|++||++||+||||+||||+|
T Consensus 172 --------------d~~~l~~~l~----~~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G 233 (406)
T PRK12381 172 --------------DLNSASALID----DQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTG 233 (406)
T ss_pred --------------CHHHHHHhcc----CCeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCc
Confidence 2467777664 4799999999999999999999999999999999999999999999999999
Q ss_pred ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV 401 (514)
Q Consensus 322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~ 401 (514)
++++++++++.||+++|||+|+|| +|+|++++++++++.+.. ..+++||++||++|+++.++|++++++++.
T Consensus 234 ~~~~~~~~~v~pDi~t~sK~l~gG-~~ig~~~~~~~~~~~~~~-------~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~ 305 (406)
T PRK12381 234 ELYAYMHYGVTPDVLTTAKALGGG-FPIGAMLTTEKCASVMTV-------GTHGTTYGGNPLASAVAGKVLELINTPEML 305 (406)
T ss_pred chhhhHhhCCCCCEEEehhhhhCC-CceEEEEEcHHHHhhcCC-------CCCCCCCCCCHHHHHHHHHHHHHHhhccHH
Confidence 988888999999999999999988 899999999999988852 357789999999999999999999888899
Q ss_pred HHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEe
Q 010250 402 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMS 479 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~ 479 (514)
++++++++++++.|+++ .+++.+..+++.|+++++++.+... .....+...|+++||++.+.+ +.|||+
T Consensus 306 ~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~~---------~~~~~~~~~l~~~Gv~v~~~g~~~lRl~ 376 (406)
T PRK12381 306 NGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEYA---------GKAKQISQEAAKAGVMVLIAGPNVVRFA 376 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCchh---------hHHHHHHHHHHHCCcEEeeCCCCEEEEe
Confidence 99999999999999988 4577788999999999999865210 124568889999999998765 679999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 480 PPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 480 p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
||+++|+++|++++++|+++++++.+
T Consensus 377 p~~~~t~~~i~~~~~~l~~~l~~~~~ 402 (406)
T PRK12381 377 PALNISEEEITTGLDRFARACERFVS 402 (406)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999976543
No 63
>PLN00144 acetylornithine transaminase
Probab=100.00 E-value=2.3e-65 Score=524.43 Aligned_cols=371 Identities=30% Similarity=0.540 Sum_probs=321.5
Q ss_pred EEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeE
Q 010250 86 IEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKV 165 (514)
Q Consensus 86 ~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v 165 (514)
+++++|+|+||+|||+||||.+++|+++|||+||+|.+|+.+|++++.+.+.. ..++...+++++|++.. +.++|
T Consensus 1 ~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~la~~l~~~~---~~~~v 75 (382)
T PLN00144 1 FVSGKGCKLYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNV--YHTIPQVELAKRLVASS---FADRV 75 (382)
T ss_pred CeeeeccEEEeCCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCcccc--ccCHHHHHHHHHHHhcC---CCCeE
Confidence 46899999999999999999999999999999999999999999987654332 24678899999999875 35799
Q ss_pred EEeCChhHHHHHHHHHHHHHHhhcCCCC-------ccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC
Q 010250 166 FFTNSGSEANDTQVKLVWYYNNALGRPN-------KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH 238 (514)
Q Consensus 166 ~~~~sGseA~~~Alk~a~~~~~~~~~~~-------~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 238 (514)
+|++||+||+|.|+|+||.|+.+++.+. |.+||.++++|||++.+++++++.+.++..+.+..+.+.+++++
T Consensus 76 ~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~- 154 (382)
T PLN00144 76 FFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYG- 154 (382)
T ss_pred EEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCC-
Confidence 9999999999999999999876544322 57899999999999999999998776665555444444443332
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc
Q 010250 239 YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 318 (514)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g 318 (514)
+++.+++++. ++++++||+||+||++|++.++++|+++|+++|++||+++|.||||+|||
T Consensus 155 -----------------d~~~l~~~~~---~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~g 214 (382)
T PLN00144 155 -----------------NLEAARKLIQ---KGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLG 214 (382)
T ss_pred -----------------CHHHHHHhcC---CCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCC
Confidence 1467777663 36799999999999999999999999999999999999999999999999
Q ss_pred cccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc
Q 010250 319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER 398 (514)
Q Consensus 319 r~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~ 398 (514)
|+|++++++++++.||++||||+|++| +|+|++++++++++.+.. ..+++||++||++|+++.++|++++++
T Consensus 215 r~g~~~~~~~~~~~PDi~t~sK~l~~G-~pig~v~~~~~~~~~~~~-------~~~~~T~~~~pl~~aaa~a~l~~i~~~ 286 (382)
T PLN00144 215 RTGYLWAHEAYGVEPDIMTLAKPLAGG-LPIGAVLVTEKVASAINP-------GDHGSTFAGGPLVCNAALAVLDKISKP 286 (382)
T ss_pred ccchHhhhhhcCCCCCEEEecccccCC-cceEEEEEcHHHHhccCC-------CCCCCCCCCCHHHHHHHHHHHHHHhhc
Confidence 999988888999999999999999999 899999999999988852 257789999999999999999999988
Q ss_pred cHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--CE
Q 010250 399 NIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DN 475 (514)
Q Consensus 399 ~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--~~ 475 (514)
++.++++++++++++.|+++ .++|.+..++|.|++++++|... ...+...|+++||++.+.+ +.
T Consensus 287 ~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg~G~~~~l~l~~~-------------~~~~~~~~~~~Gv~i~~~~~~~~ 353 (382)
T PLN00144 287 GFLASVAKKGEYLRELLRRKLGGNPHVKEVRGVGLLVGIQLDVP-------------AGPLVDACRDSGLLVLTAGKGDV 353 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCceeeecCceEEEEEecCc-------------cHHHHHHHHHCCeEEeecCCCCE
Confidence 99999999999999999886 66788889999999999999311 2357889999999998764 78
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 476 IMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 476 iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
|||+||+++|+++|++++++|++++.++
T Consensus 354 lrl~p~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 354 VRLVPPLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred EEEeCCCccCHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999998754
No 64
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=100.00 E-value=4.6e-65 Score=530.72 Aligned_cols=414 Identities=23% Similarity=0.321 Sum_probs=324.3
Q ss_pred cccccccccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhc
Q 010250 52 SSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNT 131 (514)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~ 131 (514)
.+++..+..+++.+....++++... ..+++|+++.+++|+|+||+|||+||||.+++++++|||+||+|.+|+.+|+++
T Consensus 52 ~S~~l~~ra~~~~pgGv~~~~r~~~-~~~~~p~~~~~a~G~~l~D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~ 130 (474)
T PLN02482 52 KSEEIFKAAKELMPGGVNSPVRAFK-SVGGQPIVFDRVKGSYAWDVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKK 130 (474)
T ss_pred HHHHHHHHHHhhCCCCCCCcchhhc-ccCCCCeeEEEeeeCEEEECCCCEEEEecccccccccCCCCHHHHHHHHHHHhh
Confidence 3445555677777777666665432 234579999999999999999999999999999999999999999999999998
Q ss_pred CCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCccccee-
Q 010250 132 LPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI- 210 (514)
Q Consensus 132 ~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~- 210 (514)
+... +.+++...+|+|+|++.++ +.++|+|+|||+||++.|+|+||+| ++|.+||.|+++|||++..
T Consensus 131 ~~~~----~~~~~~~~~lAe~l~~~~p--~~~~v~f~~SGsEA~e~AlklAR~~------tgr~~Ii~~~g~YHG~~~~~ 198 (474)
T PLN02482 131 GTSF----GAPCLLENVLAEMVIDAVP--SVEMVRFVNSGTEACMGVLRLARAY------TGREKIIKFEGCYHGHADSF 198 (474)
T ss_pred CCCC----CCCCHHHHHHHHHHHHhCC--CCCEEEEeCChHHHHHHHHHHHHHh------cCCCEEEEECCccCCCcchh
Confidence 6532 3467888999999999974 3789999999999999999999988 6788999999999998743
Q ss_pred -eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccC
Q 010250 211 -AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPP 289 (514)
Q Consensus 211 -~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p 289 (514)
+.+.++........ .+.++....++..+ +.+++.+++++++.+ .++++++||+||+++++|+++|
T Consensus 199 ~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~----------~~~nd~~~l~~~l~~-~~~~iAavI~Epv~g~~G~i~p 264 (474)
T PLN02482 199 LVKAGSGVATLGLPD---SPGVPKAATSATLT----------APYNDLEAVKKLFEA-NKGEIAAVILEPVVGNSGFIVP 264 (474)
T ss_pred hhhcCCCccccCCCC---CCCCCCCCCCCeEE----------ecCCChHHHHHHHHh-CCCceEEEEECCCCCCCCCcCC
Confidence 33333221111000 11111111111111 122345778887764 4578999999999999999999
Q ss_pred ChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCC
Q 010250 290 PATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTL 369 (514)
Q Consensus 290 ~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~ 369 (514)
+++||++|+++|++||++||+|||+||| |+|.+|+.+++|+.||++||||+|+|| +|+|++++++++++.+...
T Consensus 265 ~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv~PDi~t~gK~lggG-~Pigav~g~~ei~~~~~~~---- 338 (474)
T PLN02482 265 KKEFLEGLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGITPDLTTLGKVIGGG-LPVGAYGGRREIMEMVAPA---- 338 (474)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCCCCCEEEecchhhCC-CceEEEEEcHHHHHhhccC----
Confidence 9999999999999999999999999999 999999999999999999999999999 8999999999999998631
Q ss_pred CcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCC--Cce-eEEEeeeeeEEEEEccCCCCC
Q 010250 370 GSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDS--PII-GEIRGTGLILGTEFADNKSPN 445 (514)
Q Consensus 370 ~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~--~~~-~~v~g~g~~~~i~~~~~~~~~ 445 (514)
+.+.|++||++||++|++++++|++++++++.+++++++++|+++|+++ .++ +.+ ..+ +.+++++|..+....
T Consensus 339 ~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v---~g~~gi~f~~~~~~~ 415 (474)
T PLN02482 339 GPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYI---SGMFGFFFTEGPVYN 415 (474)
T ss_pred CCcccccCcchhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEccc---ceEEEEEEecCCccC
Confidence 2457889999999999999999999998899999999999999999988 443 433 233 337888886532110
Q ss_pred --CCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 446 --EPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 446 --~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
.....+......+...|+++||++.+.+...+ .||+.+|++|||++++++++++.+
T Consensus 416 ~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~~~-~psl~ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 416 FADAKKSDTAKFARFHRGMLEEGVYLAPSQFEAG-FTSLAHTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred hhhhccCCHHHHHHHHHHHHHCCeEEeccCCCCC-cCCCCCCHHHHHHHHHHHHHHHHh
Confidence 00011222345688899999999987543222 389999999999999999999865
No 65
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=1e-64 Score=571.81 Aligned_cols=395 Identities=27% Similarity=0.513 Sum_probs=327.6
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++++|+|+||.|||+||||.+++ .++||+||+|++|+.+|++++.+.+.+ .++...+|+++|+++++ .+
T Consensus 567 ~p~~i~~g~G~~l~D~dG~~ylD~~~~~--~~lGh~hp~v~~Ai~~q~~~l~~~~~~---~~~~~~elae~L~~~~p-~~ 640 (972)
T PRK06149 567 DPPQIERGWRHHLFDMAGRSYLDMVNNV--TVLGHGHPRLAAAAARQWSLLNTNSRF---HYAAVAEFSERLAALAP-DG 640 (972)
T ss_pred CCCeEEEeeeeEEEeCCCCEEEECCCCc--cccCCCCHHHHHHHHHHHHhccccccc---cCHHHHHHHHHHHHhCC-CC
Confidence 5789999999999999999999999885 479999999999999999987544322 45778999999999974 45
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCC-CCCCCcccccCCCCcc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF-DLPAPFVLHTDCPHYW 240 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~~~ 240 (514)
+++|+|+|||+|||+.|||+||.| ++|.+||+++++|||+|.++.++++........ ....+.+..++.|+.+
T Consensus 641 ~~~v~f~~SGsEA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~ 714 (972)
T PRK06149 641 LDTVFLVNSGSEANDLAIRLAWAA------SGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTY 714 (972)
T ss_pred cCEEEEeCCchHHHHHHHHHHHHh------cCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCccc
Confidence 789999999999999999999988 568899999999999999988776542211111 1112334556667666
Q ss_pred cCCCCCCC-hhHHHHHHHHHHHHHHHH--hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc
Q 010250 241 RYAHPGET-EEEYSTRLANNLEDLILK--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 317 (514)
Q Consensus 241 ~~~~~~~~-~~~~~~~~~~~le~li~~--~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~ 317 (514)
+.++...+ ..++ .+++++.+.. ..++++++||+||++|++|+++||++||++|+++|++||+++|+|||||||
T Consensus 715 ~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGf 790 (972)
T PRK06149 715 RGRFRGADSAADY----VRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGY 790 (972)
T ss_pred CCcCCCcccHHHH----HHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcC
Confidence 65543222 1222 3444444432 234689999999999999999999999999999999999999999999999
Q ss_pred ccccc-cceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh
Q 010250 318 GRLGT-MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK 396 (514)
Q Consensus 318 gr~G~-~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~ 396 (514)
||+|+ +|+++++|+.|||+|+||+|+|| +|+|++++++++++.+... + .+++|+++||++|++++++|++++
T Consensus 791 GRtG~~~~a~e~~gv~PDivt~gK~lg~G-~Pl~av~~~~~i~~~~~~~----~--~~~sT~~gnP~~~aaala~L~~i~ 863 (972)
T PRK06149 791 GRLGHYFWGFEQQGVVPDIITMAKGMGNG-HPLGAVITRREIAEALEAE----G--YFFSSTGGSPVSCRIGMAVLDVLR 863 (972)
T ss_pred CccCccchhhhhcCCCCCEEEecccccCC-eeeEEEEEcHHHHhhhccC----C--cccCCCCCCHHHHHHHHHHHHHHH
Confidence 99998 67999999999999999999999 8999999999999988631 1 345789999999999999999999
Q ss_pred hccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--
Q 010250 397 ERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-- 473 (514)
Q Consensus 397 ~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-- 473 (514)
++++.+++++++++|+++|+++ .+++++.+++|.|+|++++|..+..+..+ .......+...|+++||++.+.|
T Consensus 864 ~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~---~~~~~~~i~~~l~~~Gvl~~~~g~~ 940 (972)
T PRK06149 864 EEKLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEP---ATEETAAICDRLLELGVIMQPTGDH 940 (972)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCC---ChHHHHHHHHHHHhCCeEEeecCCC
Confidence 9999999999999999999998 56899999999999999999653322211 11235678899999999999866
Q ss_pred -CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 474 -DNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 474 -~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
+.|||.||+++|++|||+++++|++++.+
T Consensus 941 ~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 941 LNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred CCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 67999999999999999999999999864
No 66
>PRK07046 aminotransferase; Validated
Probab=100.00 E-value=1.3e-64 Score=526.92 Aligned_cols=388 Identities=17% Similarity=0.221 Sum_probs=313.2
Q ss_pred CCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC
Q 010250 81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 160 (514)
Q Consensus 81 ~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~ 160 (514)
++|+++++++|+|+||+|||+||||.+++++++|||+||+|.+|+.+|++++... ..+++...+++|+|++.+
T Consensus 56 ~~p~~~~~a~G~~v~D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~----~~~~~~~~~lAe~l~~~~--- 128 (453)
T PRK07046 56 PFPLFVAEARGARFTDVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTT----MLPSEDAAWVGEELARRF--- 128 (453)
T ss_pred CCCCeEEeeeeCEEEeCCCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCCC----CCCCHHHHHHHHHHHHHh---
Confidence 5799999999999999999999999999999999999999999999999986432 346788899999999987
Q ss_pred CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeec--CCCccccCCCC-CCCCcccccCCC
Q 010250 161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL--SGLPALHQKFD-LPAPFVLHTDCP 237 (514)
Q Consensus 161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~--s~~~~~~~~~~-~~~~~~~~~~~~ 237 (514)
+.++|+|+|||+||++.|+|+||.| ++|++||.|+++|||++...+.. ++.+..+..+. .+.... +
T Consensus 129 ~~~~v~F~nSGtEA~e~AlrlAR~~------TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~-----~ 197 (453)
T PRK07046 129 GLPYWQVATTATDANRFVLRWARAV------TGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLT-----A 197 (453)
T ss_pred CCCEEEEECCHHHHHHHHHHHHHHh------hCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCcccc-----C
Confidence 3689999999999999999999988 57899999999999996544432 22222211111 110000 0
Q ss_pred CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc
Q 010250 238 HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 317 (514)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~ 317 (514)
+... +..++.+.+++++. ++++|+||+||+++++|+++|+++||++|+++|+|||++||+|||+| |
T Consensus 198 ~~~~----------~~~nd~~~l~~~l~---~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-f 263 (453)
T PRK07046 198 TTRV----------VEFNDLAALEAALA---DGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-I 263 (453)
T ss_pred ceEe----------eCCCCHHHHHHHhC---CCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-C
Confidence 0000 11123567777763 36899999999999999999999999999999999999999999999 5
Q ss_pred ccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccC--CCCcccccCCCCCcHHHHHHHHHHHHHH
Q 010250 318 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSN--TLGSFSHGFTYSGHPVSCAVAIEALKIY 395 (514)
Q Consensus 318 gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~--~~~~~~~~~t~~~~pl~~aaa~aal~~~ 395 (514)
|+|..+..+++|++||++|+||+|+|| +|+|++++++++++.+..... ..+.+.|++||++||++|++++++|+++
T Consensus 264 -r~g~Gg~~~~~gv~PDi~t~gK~lggG-~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l 341 (453)
T PRK07046 264 -SSGPGGYTRAHGLEPDFLVVGKPIAGG-VPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEV 341 (453)
T ss_pred -ccCCcchhHHhCCCccceeehhhhcCC-CcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHH
Confidence 566666678899999999999999999 899999999999999863211 1234468899999999999999999999
Q ss_pred hhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCC--CC-CCccchHHHHHHHHHHCCcEEEe
Q 010250 396 KERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNE--PF-PPEWGIGAYFGAQCEKHGMLVRV 471 (514)
Q Consensus 396 ~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~--~~-~~~~~~~~~~~~~l~~~Gv~~~~ 471 (514)
+++++++++++++++|+++|+++ .+++++..++|.|+++.+.|.+...... .. +.+......+...|+++||++.+
T Consensus 342 ~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~ 421 (453)
T PRK07046 342 MTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITP 421 (453)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEec
Confidence 98899999999999999999987 5678888999999999999864321110 00 00122456678889999999988
Q ss_pred eCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 472 SGDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 472 ~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
.++.++++|+ +|++|||+++++++++++++.
T Consensus 422 ~~~~~~~~p~--~t~~did~~~~~~~~~l~~~~ 452 (453)
T PRK07046 422 FHNMMLVCPA--TTAADVDRLVAAFDACLGELL 452 (453)
T ss_pred ccCcEEEeCC--CCHHHHHHHHHHHHHHHHHHh
Confidence 7777899986 999999999999999997653
No 67
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=100.00 E-value=6.2e-66 Score=519.99 Aligned_cols=337 Identities=38% Similarity=0.693 Sum_probs=294.8
Q ss_pred EEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCe
Q 010250 85 VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAK 164 (514)
Q Consensus 85 ~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~ 164 (514)
+|++++|+|+||.|||+||||++++++++|||+||+|.+|+.++++++.+.+ +...+++...+|+++|.+.++. ++++
T Consensus 1 ~i~~a~G~~l~d~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~-~~~~~~~~~~~la~~L~~~~p~-~~~~ 78 (339)
T PF00202_consen 1 FIERAEGAYLWDVDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVS-FSGFTHPEAAELAEKLAELFPG-GLDR 78 (339)
T ss_dssp EEEEEEBTEEEETTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCS-TTTSEEHHHHHHHHHHHHHSST-TEEE
T ss_pred CeEEeecCEEEECCCCEEEECCCCccceecCCCccccchhHHHHhhhccccc-ccceeccchhhhhhhhhhcccc-ccce
Confidence 5899999999999999999999999999999999999999999999876653 2244678889999999999854 7899
Q ss_pred EEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCC
Q 010250 165 VFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAH 244 (514)
Q Consensus 165 v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (514)
|+|++||+||||.|||+|+.|+.....++|.+||.|+++|||+|.+++++++.+.++..+.+..+.+.++|+|+..+
T Consensus 79 v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~--- 155 (339)
T PF00202_consen 79 VFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAA--- 155 (339)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHH---
T ss_pred eeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccch---
Confidence 99999999999999999998877777788999999999999999999999988888877776666666666665322
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc
Q 010250 245 PGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF 324 (514)
Q Consensus 245 ~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~ 324 (514)
++......+++++++.+..++++++||+||+|+++|.++++++||++|+++|+|||++||+|||||||||+|++|
T Consensus 156 -----~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~ 230 (339)
T PF00202_consen 156 -----DEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFF 230 (339)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSS
T ss_pred -----hhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCcc
Confidence 223334456666666666568999999999999999999999999999999999999999999999999999999
Q ss_pred eecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHH
Q 010250 325 GCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQV 404 (514)
Q Consensus 325 ~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~ 404 (514)
+++++|++||++|+||+|+|| +|+|++++++++++.+.. ..|++||++||++|++++++|+.++++++.+++
T Consensus 231 a~~~~gv~PDiv~~gK~l~gG-~p~sav~~~~~i~~~~~~-------~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~ 302 (339)
T PF00202_consen 231 ASEHYGVDPDIVTFGKGLGGG-LPISAVLGSEEIMEAFQP-------GSHGSTFGGNPLSCAAALATLEILEEEDLLERV 302 (339)
T ss_dssp GHHHHTSSSSEEEEEGGGGTT-SSEEEEEEEHHHHTTSCT-------TSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHH
T ss_pred ceecccccCcccccccchhhh-hhcccccccchhhccccc-------cccccccccchHhhhhhhhHHHhhccHHHHHHH
Confidence 999999999999999999999 899999999999998853 248899999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEc
Q 010250 405 NKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFA 439 (514)
Q Consensus 405 ~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~ 439 (514)
++++++|+++|+++ .+++.+..++|.|+|++++|.
T Consensus 303 ~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~~ie~~ 338 (339)
T PF00202_consen 303 RELGERLREGLRELAARYPLIGEVRGIGLMIGIELV 338 (339)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEETTEEEEEES
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEeeeCeEEEEEEE
Confidence 99999999999999 456999999999999999985
No 68
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=5.9e-64 Score=518.52 Aligned_cols=408 Identities=21% Similarity=0.295 Sum_probs=323.4
Q ss_pred cccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcccc
Q 010250 58 STTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS 137 (514)
Q Consensus 58 ~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~ 137 (514)
+...++.+....++++ .+...++.|+++++++|+|+||.|||+||||.+|+|+++|||+||+|.+|+.+|++++...
T Consensus 12 ~~a~~~~p~g~~~~~~-~~~~~~~~p~~i~~a~G~~l~D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~-- 88 (433)
T PRK00615 12 SEACQYFPGGVNSPVR-ACRSVGITPPIVSSASGDIFIDSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGTSY-- 88 (433)
T ss_pred HHHHhhCCCCcCCCcc-cccccCCCCceEEEeeeCEEEECCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCCCC--
Confidence 3345565655544444 2333345899999999999999999999999999999999999999999999999886422
Q ss_pred ccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccc---eeeeec
Q 010250 138 FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGST---LIAASL 214 (514)
Q Consensus 138 ~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t---~~~~~~ 214 (514)
..+++...+|+++|++.++ .+.++|+|++||+||++.|+|+||.| ++|.+||.++++|||++ ++++++
T Consensus 89 --~~~~~~~~~la~~L~~~~~-~~~~~v~f~~SGsEA~e~AiklAr~~------tgr~~ii~~~~~yHG~td~~~~~~~~ 159 (433)
T PRK00615 89 --GLTSEQEILFAEELFSYLG-LEDHKIRFVSSGTEATMTAVRLARGI------TGRSIIIKFLGCYHGHADTLLQGISF 159 (433)
T ss_pred --CCCCHHHHHHHHHHHHhCC-CCcCEEEEeCchHHHHHHHHHHHHHh------hCCCEEEEEcCccCCCCcccCccccc
Confidence 3457788999999999874 33579999999999999999999988 57889999999999988 666666
Q ss_pred CCCcccc--CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChh
Q 010250 215 SGLPALH--QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPAT 292 (514)
Q Consensus 215 s~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~ 292 (514)
++..... ..+... .+...+.. +.+++.+++++++.+.. +++++||+||+++++|+++|+++
T Consensus 160 ~~~~~~~~~~~~~~~--------~~~~~~~~--------~~~~d~~~l~~~l~~~~-~~~aavI~Epv~~~~G~~~p~~~ 222 (433)
T PRK00615 160 SETSLDTLTHLVDTD--------LAHPLTLS--------LPYNDFQIFQTVMNSLG-HRVAGVIFEPICANMGVVLPKPG 222 (433)
T ss_pred CCCCcCcCCCCCCCC--------CCCCCeEe--------CCCCCHHHHHHHHHhcC-CceEEEEECCCCCCCCcccCCHH
Confidence 6532110 011000 00000000 11233577888886543 67999999999999999999999
Q ss_pred HHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcc
Q 010250 293 YFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF 372 (514)
Q Consensus 293 ~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~ 372 (514)
||++|+++|++||++||+||||||| |+|.+|+++++|+.||++|+||+|+|| +|+|++++++++++.+... +.+
T Consensus 223 yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~ga~~~~gv~PDi~~~gK~lggG-~p~~av~~~~~i~~~~~~~----~~~ 296 (433)
T PRK00615 223 FIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHVKPDITVYGKILGGG-LPAAAVVAHKSIMDHLAPE----GTI 296 (433)
T ss_pred HHHHHHHHHHHcCCEEEEEcccccc-cccHhHHHHhcCCCCCeEEEcccccCC-cceeeeeecHHHHhhhcCC----CCc
Confidence 9999999999999999999999999 999999999999999999999999999 7999999999999988531 244
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cC--CCceeEEEeeeeeEEEEEccCCCCC--CC
Q 010250 373 SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SD--SPIIGEIRGTGLILGTEFADNKSPN--EP 447 (514)
Q Consensus 373 ~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~--~~~~~~v~g~g~~~~i~~~~~~~~~--~~ 447 (514)
.+++||++||++|++++++|++++++++.+++++++++|+++|+++ .+ ++ +..++ .|+|++++|.+..... ..
T Consensus 297 ~~~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~-v~~~r-~G~~~~i~~~~~~~~~~~~~ 374 (433)
T PRK00615 297 FQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFP-VSLVR-YGSMFSFFFNENRPNNLAEA 374 (433)
T ss_pred ccCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEe-eceEEEEEEeCCCCCChHHH
Confidence 5788999999999999999999998899999999999999999886 34 44 66677 8999999997643211 11
Q ss_pred CCCccchHHHHHHHHHHCCcEEEeeCC-EEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 448 FPPEWGIGAYFGAQCEKHGMLVRVSGD-NIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 448 ~~~~~~~~~~~~~~l~~~Gv~~~~~g~-~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
...+......+...|+++||++.+... ..-++ ..+|++|||+++++++++++++-
T Consensus 375 ~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~ls--~~ht~~did~~~~a~~~~~~~~~ 430 (433)
T PRK00615 375 QLSDIEAFQTFYQSAFSKGVYLSPSPFEASFLS--SAHSMENLDYAQNVLIDSLEKVF 430 (433)
T ss_pred hhCCHHHHHHHHHHHHHCCeeecCcccccccee--cCCCHHHHHHHHHHHHHHHHHHh
Confidence 111223456788999999999886431 12234 77999999999999999998763
No 69
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=100.00 E-value=4.8e-62 Score=504.27 Aligned_cols=371 Identities=28% Similarity=0.509 Sum_probs=318.5
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++|+|+|+||.|||+||||.+|+++.+|||+||+|++|+.+|++++.+.+.. ..++...+|+++|+++. +
T Consensus 22 ~p~~~~~~~G~~l~d~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~---~ 96 (396)
T PRK04073 22 LPIVISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRA--FHSDQLGPWYEKVAKLT---G 96 (396)
T ss_pred CCceEEeeeecEEEECCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccccc--cCCHHHHHHHHHHHhcC---C
Confidence 688999999999999999999999999999999999999999999999987654332 25677899999999986 3
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhh-cC-CCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNA-LG-RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 239 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~-~~-~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 239 (514)
.++++|++||+|||++|||+|+.|+.. ++ .++|++||.++++|||++.+++++++.+.+...+.+..+.+.+++++
T Consensus 97 ~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 174 (396)
T PRK04073 97 KDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYG-- 174 (396)
T ss_pred CCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCC--
Confidence 479999999999999999999987432 13 25678999999999999999999888766655555443433333322
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250 240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319 (514)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr 319 (514)
+++++++.+. +++++|++||+++++|.+.|+++||++|+++|++||+++|+||||+||||
T Consensus 175 ----------------d~~~l~~~i~----~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~ 234 (396)
T PRK04073 175 ----------------DLEALKAAIT----PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGR 234 (396)
T ss_pred ----------------CHHHHHHhcc----cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCc
Confidence 1466666653 46899999999999999999999999999999999999999999999999
Q ss_pred ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 399 (514)
Q Consensus 320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~ 399 (514)
+|++++.+++++.||+++|||++++|++|+|++++++++++.+.. ..+++||++||++|++++++|+.+++++
T Consensus 235 ~g~~~~~~~~~~~pdi~~~sK~lg~gg~~ig~~~~~~~i~~~~~~-------~~~~~t~~~~~~~~aaa~aaL~~~~~~~ 307 (396)
T PRK04073 235 TGKLFACDWDNVTPDMYILGKALGGGVFPISCVAANRDILGVFTP-------GSHGSTFGGNPLACAVSIAALEVLEEEK 307 (396)
T ss_pred CcHHHHhhhcCCCCCEEEecccccCCCCcceEEEEcHHHHhhhcC-------CCCCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 999888888999999999999999988999999999999988852 2467899999999999999999998888
Q ss_pred HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEE
Q 010250 400 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMM 478 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi 478 (514)
+.+++++++++|.+.|+++ ..+.+..+++.|+++++++... ...+.+.|+++||++.+.+ +.|||
T Consensus 308 l~~~~~~~~~~l~~~L~~l-~~~~i~~~~~~g~~~~~~~~~~-------------~~~~~~~l~~~Gv~~~~~~~~~iRi 373 (396)
T PRK04073 308 LPERSLELGEYFKEQLKEI-DNPMIKEVRGRGLFIGVELNEP-------------ARPYCEALKEEGLLCKETHETVIRF 373 (396)
T ss_pred HHHHHHHHHHHHHHHHHhh-cCCcccceecceEEEEEEecch-------------HHHHHHHHHHCCeEEecCCCCEEEE
Confidence 9999999999999999987 3456778899999999988531 3457888999999998765 67999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHH
Q 010250 479 SPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 479 ~p~~~~t~e~id~~~~~l~~~l 500 (514)
+||+.+|+|||++++++|++++
T Consensus 374 ~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 374 APPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred ECCcccCHHHHHHHHHHHHHHh
Confidence 9999999999999999999875
No 70
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=1.5e-61 Score=499.91 Aligned_cols=373 Identities=28% Similarity=0.500 Sum_probs=322.2
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++++|+|+||+|||+||||.||+|+++|||+||+|.+|+.+|++++.+.... ..++...+++++|++.. +
T Consensus 13 ~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~la~~l~~~~---~ 87 (389)
T PRK01278 13 ADLAFERGEGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNL--YRIPEQERLAERLVENS---F 87 (389)
T ss_pred CCceEEeeecCEEEECCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccccc--cCChHHHHHHHHHHhhC---C
Confidence 688999999999999999999999999999999999999999999999886544332 25678899999999986 3
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
.++|+|++||+||++.|+|+++.|+..+|.++|.+||+++++|||++.+++++++.+.+...+.+..+.+.+++.+
T Consensus 88 ~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 163 (389)
T PRK01278 88 ADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFG---- 163 (389)
T ss_pred CCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCC----
Confidence 4799999999999999999999987777777788999999999999999998888766554444222222222221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G 321 (514)
+.+++++++. +++++|++||+++++|+++++++|+++|+++|++||++||+||||+||||+|
T Consensus 164 --------------d~~~l~~~l~----~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g 225 (389)
T PRK01278 164 --------------DIEALKAAIT----PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTG 225 (389)
T ss_pred --------------CHHHHHHhhC----CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC
Confidence 2467777764 4799999999999999999999999999999999999999999999999999
Q ss_pred ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV 401 (514)
Q Consensus 322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~ 401 (514)
++++++++++.||+++|||++++| +|+|++++++++++.+. ...+++||++||+++++++++|+.++++++.
T Consensus 226 ~~~~~~~~~~~pdi~t~sK~l~~G-~~ig~~~~~~~~~~~~~-------~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~ 297 (389)
T PRK01278 226 KLFAHEWAGVTPDIMAVAKGIGGG-FPLGACLATEEAAKGMT-------PGTHGSTYGGNPLAMAVGNAVLDVILAPGFL 297 (389)
T ss_pred cceeecccCCCCCEEEEehhccCC-cceEEEEEcHHHHhccC-------CCCCCCCCCccHHHHHHHHHHHHHHhhhHHH
Confidence 988888899999999999999988 89999999999988775 2357789999999999999999999877889
Q ss_pred HHHHHHHHHHHhhhhhc-cCCC-ceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEE
Q 010250 402 EQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMM 478 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l-~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi 478 (514)
+++++++++++++|+++ ..++ ++..+++.|+++++++... ...++..|+++||++.+.+ +.|||
T Consensus 298 ~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~~-------------~~~~~~~l~~~GV~~~p~~~~~lR~ 364 (389)
T PRK01278 298 DNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVVP-------------NRDLVQALRDEGLLTVGAGDNVVRL 364 (389)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEecC-------------HHHHHHHHHHCCeEEeecCCCEEEE
Confidence 99999999999999987 4566 7788999999999988431 3468899999999999876 67999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 479 SPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 479 ~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
+||+++++++|++++++|++++++
T Consensus 365 ~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 365 LPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred eCCcccCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998864
No 71
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=100.00 E-value=2.2e-59 Score=485.44 Aligned_cols=378 Identities=32% Similarity=0.559 Sum_probs=318.8
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++.+++|+|+||.|||+||||.+|+|+++|||+||+|.+|+.++++++...... .++++..+++++|+++. +
T Consensus 22 ~~~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~---~ 96 (403)
T PRK05093 22 AEFIPVRGEGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNV--FTNEPALRLAKKLIDAT---F 96 (403)
T ss_pred CCeeEEEeecCEEEeCCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccCc--cCCHHHHHHHHHHHhhC---C
Confidence 788999999999999999999999999999999999999999999999875433221 24677889999999986 3
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
.++++|++||+|||+.|+|+|+.|+.....+++.+||+++++|||++.+++++++.+.+..++.+....+.+++.
T Consensus 97 ~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 171 (403)
T PRK05093 97 AERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF----- 171 (403)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-----
Confidence 479999999999999999999988654444568899999999999999888887765544444322222222222
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G 321 (514)
++++++++.+. +++++|++||+++++|+++|+++|+++|+++|++||+++|+||||+||||+|
T Consensus 172 -------------~d~~~l~~~l~----~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g 234 (403)
T PRK05093 172 -------------NDLAAVKAVID----DHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTG 234 (403)
T ss_pred -------------CCHHHHHHHhc----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc
Confidence 22566777663 4699999999999999999999999999999999999999999999999999
Q ss_pred ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV 401 (514)
Q Consensus 322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~ 401 (514)
++++.+++++.||+++|||++++| +|+|++++++++++.+.. ..++.|++++|++++++.++|+.+.++++.
T Consensus 235 ~~~~~~~~~~~pdi~s~sK~l~~G-~rig~vv~~~~i~~~l~~-------~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~ 306 (403)
T PRK05093 235 DLFAYMHYGVTPDILTSAKALGGG-FPIGAMLTTAEIASHFKV-------GTHGSTYGGNPLACAVAEAVFDIINTPEVL 306 (403)
T ss_pred cchhhhhcCCCCCEEEecccccCC-cceEEEEEcHHHHhhcCC-------CCCCCCCCCCHHHHHHHHHHHHHHhhccHH
Confidence 887778899999999999999988 899999999999988862 246678999999999999999998878899
Q ss_pred HHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEe
Q 010250 402 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMS 479 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~ 479 (514)
++++++++++.+.|+++ .+.+.+..+++.|+++++.+.+... .....++..|+++||++.+.+ +.+||+
T Consensus 307 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~---------~~~~~~~~~l~~~Gv~v~~~g~~~lRl~ 377 (403)
T PRK05093 307 EGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYK---------GRARDFLNAAAEEGVMVLVAGPDVLRFA 377 (403)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcch---------hHHHHHHHHHHHCCeEEecCCCCEEEEe
Confidence 99999999999999987 3456777899999999999864210 124568899999999999866 679999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 480 PPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 480 p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
|++.+++++|++++++|++++.++
T Consensus 378 ~~~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 378 PSLVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999988653
No 72
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=100.00 E-value=2.4e-59 Score=485.13 Aligned_cols=379 Identities=31% Similarity=0.510 Sum_probs=321.0
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++.+++|+++||.||++||||.|++++.++||+||+|++|+.++++++.+.+..+ .++...+++++|++++ +
T Consensus 19 ~~~~~~~~~g~~~~~~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~l~~~l~~~~---~ 93 (401)
T TIGR01885 19 LPVVFSKAEGVHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAF--YNDVFGEFAEYVTKLF---G 93 (401)
T ss_pred CCceEEeeecCEEEeCCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhcccccccc--CCHHHHHHHHHHHhhc---C
Confidence 6788999999999999999999999999999999999999999999998866543322 5678899999999987 3
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhc--CCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNAL--GRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 239 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~--~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 239 (514)
.++++|++||+|||++|+|+++.|+.+. ..+++.+|++++++|||++.+++++++.+.+...++...+.+..++.
T Consensus 94 ~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 170 (401)
T TIGR01885 94 YDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY--- 170 (401)
T ss_pred CCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC---
Confidence 5799999999999999999999875432 22457899999999999999999988765544444432222222222
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250 240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319 (514)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr 319 (514)
++.++|++++.+. ++++++|++||+++++|.+.|+++||++|+++|++||+++|+||||+||||
T Consensus 171 ---------------~d~~~le~~l~~~-~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~ 234 (401)
T TIGR01885 171 ---------------NNLEALEEALEDH-GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGR 234 (401)
T ss_pred ---------------CCHHHHHHHHHhc-CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCc
Confidence 1257888888654 367999999999999999999999999999999999999999999999999
Q ss_pred ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 399 (514)
Q Consensus 320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~ 399 (514)
+|++++.+++++.||++++||+++||++|+|++++++++++.+.. ..+++|++++|++++++.++|+.+++++
T Consensus 235 ~G~~~~~~~~~~~~di~~~gK~l~~g~~~ig~v~~~~~i~~~~~~-------~~~~~t~~~~p~~~~aa~a~L~~i~~~~ 307 (401)
T TIGR01885 235 TGKLLCVDHENVKPDIVLLGKALSGGVYPVSAVLADDDVMLTIKP-------GEHGSTYGGNPLACAVAVAALEVLEEEK 307 (401)
T ss_pred cchhhHHhhcCCCCCEEEeeccccCCCCCcEEEEEcHHHHhhccC-------CCCCCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 999888888899999999999999988999999999999988752 2356799999999999999999998878
Q ss_pred HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEE
Q 010250 400 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMM 478 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi 478 (514)
+.++++++++++++.|+++ ..+++..++|.|+|+.+.+.++... .....+...|.++||++.+.+ +.+||
T Consensus 308 l~~~~~~~~~~~~~~L~~l-~~~~~~~~~g~g~~~~i~~~~~~~~--------~~~~~l~~~l~~~Gv~v~~~~~~~lRi 378 (401)
T TIGR01885 308 LAENAEKLGEIFRDQLKKL-PKPIITEVRGRGLLNAIVIDESKTG--------RTAWDLCLKLKEKGLLAKPTHGNIIRL 378 (401)
T ss_pred HHHHHHHHHHHHHHHHHhc-cCCceeEEeecCeeEEEEeccCcch--------hHHHHHHHHHHhCCEEEEecCCCEEEE
Confidence 9999999999999999988 3467778899999999988653210 124568899999999998765 57999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHH
Q 010250 479 SPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 479 ~p~~~~t~e~id~~~~~l~~~l 500 (514)
+||+.+|+++|++++++|++++
T Consensus 379 ~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 379 APPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred eCCccCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999876
No 73
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=6.4e-59 Score=483.85 Aligned_cols=418 Identities=24% Similarity=0.355 Sum_probs=328.0
Q ss_pred ccccccccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcC
Q 010250 53 SQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTL 132 (514)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~ 132 (514)
+++..+..++|.+.....|... |......|+++.+++|+|+||.|||+||||.+|+++.+|||+||+|++|+.+|+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~G~~l~d~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~ 82 (426)
T PRK00062 4 SEELFERAKKLIPGGVNSPVRA-FKSVGGTPRFIERAKGAYLYDVDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKG 82 (426)
T ss_pred hHHHHHHHHHhCCCCcCCcccc-cCCCCCCCeEEEeCcCCEEEeCCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhC
Confidence 3444445566766554333222 333334678999999999999999999999999999999999999999999999874
Q ss_pred CccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee
Q 010250 133 PFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA 212 (514)
Q Consensus 133 ~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~ 212 (514)
.. +...++...+|+++|++.++ ++++|+|++||+|||+.|+|+++.+ +++++||+++++|||++.+..
T Consensus 83 ~~----~~~~~~~~~~la~~L~~~~~--~~~~v~~~~sGseA~e~Aik~a~~~------~g~~~ii~~~~~yHG~t~~~~ 150 (426)
T PRK00062 83 LS----FGAPTELEVELAELVIELVP--SIEMVRMVNSGTEATMSAIRLARGY------TGRDKIIKFEGCYHGHADSLL 150 (426)
T ss_pred Cc----CCCCCHHHHHHHHHHHHhCC--CCCEEEEecCHHHHHHHHHHHHHHH------hCCCeEEEEcCccCCchhhhh
Confidence 32 13356778899999999874 4689999999999999999999977 457899999999999997776
Q ss_pred ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChh
Q 010250 213 SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPAT 292 (514)
Q Consensus 213 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~ 292 (514)
+.++......... ..+.......+..+++ .+++.+++++.+.+. ++++++||+||+++++|+++|+++
T Consensus 151 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----------~~~d~~~l~~~i~~~-~~~~aaiivEpv~~~~G~~~~~~~ 218 (426)
T PRK00062 151 VKAGSGAATLGLP-DSPGVPEDFAKHTLTA----------PYNDLEAVEELFEEY-GDEIAAVIVEPVAGNMGVVPPKPG 218 (426)
T ss_pred hccCccccccCCC-CCCCCCcccccceEEc----------CCCCHHHHHHHHHhC-CCcEEEEEEeCCcCCCCCcCCCHH
Confidence 6654322111100 0011100000111111 122357788877643 468999999999999999999999
Q ss_pred HHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcc
Q 010250 293 YFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF 372 (514)
Q Consensus 293 ~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~ 372 (514)
||++|+++|++||+++|+||||+|| |+|.+++.+++++.||++++||++++| +|+|++++++++++.+... +.+
T Consensus 219 ~l~~l~~l~~~~~~llI~DEv~~G~-r~g~~~~~~~~~~~pDi~~~gK~l~~G-~p~ga~~~~~~i~~~~~~~----~~~ 292 (426)
T PRK00062 219 FLEGLRELCDEHGALLIFDEVMTGF-RVALGGAQGYYGVTPDLTTLGKIIGGG-LPVGAFGGRREIMEQLAPL----GPV 292 (426)
T ss_pred HHHHHHHHHHHcCCEEEEeechhcc-ccCCccHHHHhCCCcchHhhhhHhhCC-CcceeeeEHHHHHHhhccC----CCc
Confidence 9999999999999999999999999 999888888999999999999999988 8999999999999988531 234
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCC--CC
Q 010250 373 SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEP--FP 449 (514)
Q Consensus 373 ~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~--~~ 449 (514)
.+++|+++||++|++++++|++++++++.++++++++++++.|+++ .+++.+.+++|.|+|+++++.++...... ..
T Consensus 293 ~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~ 372 (426)
T PRK00062 293 YQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKK 372 (426)
T ss_pred eecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhcc
Confidence 5778999999999999999999988889999999999999999987 56788889999999999999754221000 00
Q ss_pred CccchHHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 450 PEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 450 ~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
.+......+...|+++||++.+.+ +.++++ +++|++||++++++|++++.++
T Consensus 373 ~~~~~~~~i~~~l~~~Gv~v~~~~~~~~~~~--~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 373 SDTERFARFFHAMLDEGVYLAPSQFEAGFVS--AAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred ccHHHHHHHHHHHHHCCeEeecCCcCceeee--ccCCHHHHHHHHHHHHHHHHhh
Confidence 011234678899999999998765 567775 8999999999999999998654
No 74
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=100.00 E-value=1.1e-58 Score=483.55 Aligned_cols=409 Identities=24% Similarity=0.386 Sum_probs=321.3
Q ss_pred ccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccc
Q 010250 59 TTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSF 138 (514)
Q Consensus 59 ~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~ 138 (514)
...++.+.....++... ....+.|+++++|+|+|+||.|||+||||.+|+|+++|||+||+|++|+.+|++++..+
T Consensus 8 ~~~~~~~~g~~~~~~~~-~~~~~~p~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~--- 83 (423)
T TIGR00713 8 EAKQVFPGGVNSPVRAF-KSVGPTPFFVARGKGAYLYDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTSY--- 83 (423)
T ss_pred HHHhhCCCCCCCccccc-ccCCCCCeeEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCcC---
Confidence 34555555543333221 11134789999999999999999999999999999999999999999999999886432
Q ss_pred cccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc
Q 010250 139 WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP 218 (514)
Q Consensus 139 ~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~ 218 (514)
..+++...+|+++|++.++. .++|+|++||+||++.|+|+|+.| +++++||+++++|||++...++.++..
T Consensus 84 -~~~~~~~~~lae~l~~~~~~--~~~v~~~~sGseA~e~Alk~ar~~------~gr~~ii~~~~~yhG~~~~~~~~~~~~ 154 (423)
T TIGR00713 84 -GAPTEAEILLAKEIISRVPS--VEMVRFVNSGTEATMSAVRLARGY------TGRDKIIKFEGCYHGHHDALLVKAGSG 154 (423)
T ss_pred -CCCCHHHHHHHHHHHHhCCc--ccEEEEeCCHHHHHHHHHHHHHHh------hCCCEEEEEcCCCCCChhhhhccccCc
Confidence 33567789999999998743 479999999999999999999988 467899999999999976666544432
Q ss_pred --cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHH
Q 010250 219 --ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEK 296 (514)
Q Consensus 219 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~ 296 (514)
.....+. +.......+..++++ +++++++++++.+. ++++++||+||+++++|.+.|+++|+++
T Consensus 155 ~~~~~~~~~---~~~~~~~~~~~~~~~----------~~d~~~l~~~i~~~-~~~~aavi~ep~~~~~G~~~~~~~~l~~ 220 (423)
T TIGR00713 155 AATLGLPTS---PGVPEDFAKLTLVLP----------YNDLEALEEVFEEY-GEEIAGVIVEPVAGNMGVVPPKPEFLAG 220 (423)
T ss_pred ccccCCCCC---CCCCcccccceEEeC----------CCCHHHHHHHHHHc-CCcEEEEEEeCCCCCCCCcCCCHHHHHH
Confidence 1111111 111111111112211 12357888887643 3679999999999999999998999999
Q ss_pred HHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccC
Q 010250 297 VQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF 376 (514)
Q Consensus 297 l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~ 376 (514)
|+++|++||+++|+||||+|| |+|.+++.+++++.||++||||++++| +|+|++++++++++.+... +.+.+++
T Consensus 221 l~~l~~~~~~llI~DEv~~g~-r~g~~~~~~~~~~~pDi~t~sK~l~~G-~pig~v~~~~~i~~~~~~~----~~~~~~~ 294 (423)
T TIGR00713 221 LRALTEEYGSLLIFDEVMTGF-RVALGGAQEYFGVEPDLTTLGKIIGGG-LPVGAFGGRREIMERLAPE----GPVYQAG 294 (423)
T ss_pred HHHHHHHhCCEEEEEcccccc-ccCcchhHHHhCCCcchhhhhhhhcCC-CceeeeeEHHHHHHhhCcC----CCeeecc
Confidence 999999999999999999999 999888888899999999999999988 8999999999999988631 2345778
Q ss_pred CCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCC--CCCccc
Q 010250 377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEP--FPPEWG 453 (514)
Q Consensus 377 t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~--~~~~~~ 453 (514)
||++||++|++++++|+.++++++.++++++++++++.|+++ .+++++..+++.|+++++++..+...... ...+..
T Consensus 295 T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~ 374 (423)
T TIGR00713 295 TLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTE 374 (423)
T ss_pred CCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHH
Confidence 999999999999999999988889999999999999999876 56788888999999999998753211100 000111
Q ss_pred hHHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 454 IGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 454 ~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
....+...|+++||++.+.+ +.+||+|+ +|+++|++++++|++++++
T Consensus 375 ~~~~~~~~l~~~Gv~v~~~~~~~~~l~~~--~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 375 LFAKFFHEMLDKGVFLPPSQFEACFLSAA--HTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred HHHHHHHHHHHCCeEEecCCccceeeECC--CCHHHHHHHHHHHHHHHhh
Confidence 23467888999999987654 46899976 8999999999999999865
No 75
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=100.00 E-value=1.8e-58 Score=481.02 Aligned_cols=395 Identities=27% Similarity=0.486 Sum_probs=326.5
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++++|+|+||+|||+||||.+|+++.+|||+||+|.+++.+|++++.+... ....++...+++++|++..+...
T Consensus 23 ~p~~~~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~~~~~ 101 (425)
T PRK08088 23 HPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCF-QVLAYEPYLELCEKMNQKVPGDF 101 (425)
T ss_pred CCceEEeeeeCEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccc-cccCCHHHHHHHHHHHHhCCCCC
Confidence 57899999999999999999999999999999999999999999999998654321 11235677899999999864322
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-cccCCCCCCCCcccccCCCCcc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYW 240 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
.++++|++||+||++.|+|+|+.+ +++.+||.++++|||++.+++++++.. .++.++....+.+.++++|..+
T Consensus 102 ~~~~~f~~sGsea~e~Alklar~~------~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 175 (425)
T PRK08088 102 AKKTLLVTTGSEAVENAVKIARAA------TKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPL 175 (425)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHH------hCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccc
Confidence 369999999999999999999987 467789999999999999999887642 3445555443444444444332
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHH-hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLILK-EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~~-~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr 319 (514)
+ +.+ ...++++|++++.+ ..++++++||+||+++++|.+.++++|+++|+++|++||+++|.||+|+|+||
T Consensus 176 ~----~~~----~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~ 247 (425)
T PRK08088 176 H----GVS----EDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGR 247 (425)
T ss_pred c----Ccc----HHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 2 111 11235678887753 23578999999999999999999999999999999999999999999999999
Q ss_pred ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 399 (514)
Q Consensus 320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~ 399 (514)
+|.+++++++++.||+.+|||++++| +|+|++++++++++.+.. ..+++|++++|+.++++.++|+.+++++
T Consensus 248 ~g~~~~~~~~~~~pdi~s~sK~l~~G-~rig~v~~~~~~~~~~~~-------~~~~~t~~~~~~~~~a~~~~l~~~~~~~ 319 (425)
T PRK08088 248 TGTLFAMEQMGVAADLTTFAKSIAGG-FPLAGVTGRAEVMDAIAP-------GGLGGTYAGNPIACAAALAVLKVFEQEN 319 (425)
T ss_pred CcchhHHhhcCCCCCEEEEeccccCC-CcceeeEecHHHHhhcCC-------CCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 99888888889999999999999988 899999999999998863 2467899999999999999999998889
Q ss_pred HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CE
Q 010250 400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DN 475 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~ 475 (514)
+.+++++.++++++.|.++ .++|.+..++|.|+++++.|.++.....+ .......+...|.++||++.+.+ +.
T Consensus 320 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G~~~~l~l~~~~~~~~p---~~~~~~~l~~~~~~~Gv~~~~~~~~~~~ 396 (425)
T PRK08088 320 LLQKANALGEKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHSKP---NAKLTAQIVARARDKGLILLSCGPYYNV 396 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEEeccceEEEEEEecCCCCCCC---CHHHHHHHHHHHHhCCCEEecCCCCCCE
Confidence 9999999999999999988 56788889999999999999643221111 11245678899999999887643 77
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 476 IMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 476 iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
|||+||+.+|++||++++++|++++.+
T Consensus 397 iRl~~~~~~t~~ei~~~i~~l~~~l~~ 423 (425)
T PRK08088 397 LRILVPLTIEDAQIRQGLEIIAQCFDE 423 (425)
T ss_pred EEEECCCCcCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999864
No 76
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=3e-58 Score=476.93 Aligned_cols=371 Identities=33% Similarity=0.589 Sum_probs=314.5
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++.+++|+++||.|||+||||.+++++++|||+||+|.+|+.+++++..+.... .+++...+++++|++.++..+
T Consensus 25 ~~~~~~~~~G~~~~d~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~--~~~~~~~~la~~l~~~~~~~~ 102 (398)
T PRK03244 25 PPLALVRGEGAVVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNL--FATEPQIALAERLVELLGAPE 102 (398)
T ss_pred CCceEEEeeecEEEECCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCc--cCCHHHHHHHHHHHHhCCCCC
Confidence 678999999999999999999999999999999999999999999999986543221 245667899999999875334
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
.++++|++||+||++.|+++++.+ ++++||.++++|||++..++++++.+.....+....+.+..++++
T Consensus 103 ~~~v~~~~sgsea~~~al~~~~~~-------g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 171 (398)
T PRK03244 103 GGRVFFCNSGAEANEAAFKLARLT-------GRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYG---- 171 (398)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHH-------CCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCC----
Confidence 579999999999999999998743 467899999999999998888877654443333221222222211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G 321 (514)
+.+++++++. +++++|++||+++++|.+.|+++|+++|+++|++||+++|+||+|+||||+|
T Consensus 172 --------------d~~~l~~~~~----~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g 233 (398)
T PRK03244 172 --------------DVDALAAAVD----DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTG 233 (398)
T ss_pred --------------CHHHHHHhhc----CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccc
Confidence 2466777663 4789999999999999999999999999999999999999999999999999
Q ss_pred ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV 401 (514)
Q Consensus 322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~ 401 (514)
++++++++++.||+++|||+|++| +|+|++++++++++.+.. ..+++||++||++|+++.++|++++++++.
T Consensus 234 ~~~~~~~~~~~pDi~t~sK~l~~G-~~ig~~~~~~~~~~~~~~-------~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~ 305 (398)
T PRK03244 234 AWFAHQHDGVTPDVVTLAKGLGGG-LPIGACLAFGPAADLLTP-------GLHGSTFGGNPVACAAALAVLDTIASEGLL 305 (398)
T ss_pred hHHhhhhhCCCCCEEEEchhhhCC-cccEEEEEcHHHHhhccC-------CCCcCCCCCCHHHHHHHHHHHHHHHhccHH
Confidence 988888899999999999999988 899999999999888752 357789999999999999999999888899
Q ss_pred HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEeC
Q 010250 402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSP 480 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p 480 (514)
+++++++++|++.|+++ +++.+..+++.|++++++++.. ....+.+.|+++|+++.+.+ +.|||+|
T Consensus 306 ~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g~~~~i~~~~~------------~~~~~~~~l~~~Gv~~~~~~~~~iR~~p 372 (398)
T PRK03244 306 ENAERLGEQLRAGIEAL-GHPLVDHVRGRGLLLGIVLTAP------------VAKAVEAAAREAGFLVNAVAPDVIRLAP 372 (398)
T ss_pred HHHHHHHHHHHHHHHhc-CCCceeeEeeccEEEEEEEecc------------HHHHHHHHHHHCCeEEeecCCCEEEEEC
Confidence 99999999999999987 4577788999999999998532 14568899999999998755 7899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 481 PFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 481 ~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
|+.+|++||++++++|++++.++.
T Consensus 373 ~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 373 PLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred CCcCCHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999987643
No 77
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=100.00 E-value=2.2e-59 Score=432.63 Aligned_cols=406 Identities=26% Similarity=0.525 Sum_probs=337.3
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+.|+|++|.|++|.+|++|||+.++. .-.||+||+|++|...|+.......+| .++...+.|+.|...++ +
T Consensus 29 DP~kivRaq~QYmfDE~g~~yLDCInNV--aHvghchp~VV~A~~kQmat~~tN~RF---lhd~lv~cA~~l~stlP--e 101 (452)
T KOG1403|consen 29 DPLKIVRAQGQYMFDEEGTRYLDCINNV--AHVGHCHPEVVRAGAKQMATISTNNRF---LHDELVQCARTLTSTLP--E 101 (452)
T ss_pred CchhhehhccceeeccCcccHHHHhhhh--hhcccCCHHHHHHHHHHHhHhcccchh---hHHHHHHHHHHHhhcCC--C
Confidence 7899999999999999999999999885 458999999999999999887655554 35677889999999875 4
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCC-cccccCCCCcc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAP-FVLHTDCPHYW 240 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~~~~ 240 (514)
++.++|+|||+|||+.|+++||.| ++..++|+.+..|||+....+-+|-. .+.++-+...| ++...|||+.|
T Consensus 102 Lsvc~F~NSGSEANDLALRLAR~f------tkhqDvItldHAYHGHl~s~mE~SPY-KF~~g~~v~kpd~VHVAPcPDvy 174 (452)
T KOG1403|consen 102 LSVCFFVNSGSEANDLALRLARNF------TKHQDVITLDHAYHGHLQSVMEVSPY-KFNQGGGVAKPDYVHVAPCPDVY 174 (452)
T ss_pred ceEEEEecCCchhhHHHHHHHHhh------cccCceEEEechhccceeeeeeccce-eccCCCCcCCCceeEecCCcccc
Confidence 889999999999999999999988 67789999999999996655555432 22333344444 45667899999
Q ss_pred cCCCCCCCh--hHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC
Q 010250 241 RYAHPGETE--EEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA 316 (514)
Q Consensus 241 ~~~~~~~~~--~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG 316 (514)
|..+..... .+......+++++.+.+. ....+|++|.|..|+-||.+.||.+|++.+.+..+.+|-++|.||||+|
T Consensus 175 rGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvG 254 (452)
T KOG1403|consen 175 RGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVG 254 (452)
T ss_pred ccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhc
Confidence 985433211 111122345566655543 2346999999999999999999999999999999999999999999999
Q ss_pred cccccc-cceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH
Q 010250 317 FGRLGT-MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY 395 (514)
Q Consensus 317 ~gr~G~-~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~ 395 (514)
|||.|+ .|+++.|++-|||||+||.||+| .|+++++.++++.+.+... ......||+|||++||+++++++++
T Consensus 255 FGRvG~hyWafq~y~fiPDIVtmgKpmGNG-hPVa~VattkeIA~Af~at-----gv~YFNTyGGnPVsCAv~laVm~v~ 328 (452)
T KOG1403|consen 255 FGRVGSHYWAFQTYNFIPDIVTMGKPMGNG-HPVAAVATTKEIAQAFHAT-----GVEYFNTYGGNPVSCAVGLAVMRVC 328 (452)
T ss_pred ccccchhhhhhhhhccccchheecccCCCC-CeeeEEeccHHHHHHhccc-----cceehhccCCCchhHHHHHHHHHHH
Confidence 999997 78999999999999999999999 7999999999999999742 2345679999999999999999999
Q ss_pred hhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEeeC
Q 010250 396 KERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVSG 473 (514)
Q Consensus 396 ~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~g 473 (514)
+++++.++.++.+++|...|+++ .++++++++||.|+++++++..+...+.|... .+..+..+|++ .|+++...|
T Consensus 329 e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk---~A~~~v~rlke~y~VLlsaDG 405 (452)
T KOG1403|consen 329 EDENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTK---EAHWVVNRLKELYRVLLSADG 405 (452)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcHH---HHHHHHHHHHHhhhEEEecCC
Confidence 99999999999999999999988 68999999999999999999877666554433 24556677765 578887543
Q ss_pred ---CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010250 474 ---DNIMMSPPFIMSPEEVDELISKYGKALKATEERVKEL 510 (514)
Q Consensus 474 ---~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~~~~ 510 (514)
+.+.|.||.+.+++++++.+..|++.|.-+.+++...
T Consensus 406 Ph~NilKiKPPmCFneena~e~v~~ld~iLT~mee~~~s~ 445 (452)
T KOG1403|consen 406 PHRNILKIKPPMCFNEENADEFVLGLDEILTVMEERLASA 445 (452)
T ss_pred CCCceeecCCCcccChhhHHHHHHHHHHHHHHHHHHHhhh
Confidence 6799999999999999999999999999777777553
No 78
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.1e-57 Score=469.53 Aligned_cols=365 Identities=32% Similarity=0.508 Sum_probs=310.0
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
+|+++++++|+|+||+|||+||||.||+++++|||+||+|++|+.++++++.+.+.. ..++...++++++.+.. +
T Consensus 11 ~~~~~~~~~G~~~~d~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~la~~l~~~~---~ 85 (377)
T PRK02936 11 FPIDIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVSNL--FTNSLQEEVASLLAENS---A 85 (377)
T ss_pred CCceEEEeecCEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccc--cCCHHHHHHHHHHHhcC---C
Confidence 678999999999999999999999999999999999999999999999875443222 24567788888888765 2
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
.++++|++||+||++.|+++++.+ +++++||+++++|||++..++++++.+..+..+.+..+.+..++.
T Consensus 86 ~~~~~~~~sG~~a~~~A~~~a~~~------~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 154 (377)
T PRK02936 86 GDLVFFCNSGAEANEAALKLARKH------TGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPF----- 154 (377)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHh------cCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCC-----
Confidence 468999999999999999999876 567899999999999999988888765555444433222222221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G 321 (514)
++.+++++++. +++++|++||+++++|.++++++||++|+++|++||+++|+||||+||||+|
T Consensus 155 -------------~d~~~l~~~~~----~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g 217 (377)
T PRK02936 155 -------------NDIKALKEVMN----EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTG 217 (377)
T ss_pred -------------CCHHHHHHhcc----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc
Confidence 12466777664 4689999999999999999999999999999999999999999999999999
Q ss_pred ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV 401 (514)
Q Consensus 322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~ 401 (514)
++++++++++.||++++||++++| +|+|++++++++++.+.. ..+.+|+++||++++++.++|+.+.++++.
T Consensus 218 ~~~~~~~~~~~~di~t~sK~l~~G-~~ig~v~~~~~~~~~~~~-------~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~ 289 (377)
T PRK02936 218 TLFAYEQFGLDPDIVTVAKGLGNG-IPVGAMIGKKELGTAFGP-------GSHGSTFGGNPLAMAAAKEVLQVIKQPSFL 289 (377)
T ss_pred hhhHHHhhCCCCcEEEEcccccCC-CccEEEEEcHHHHhhccC-------CCCCCCCCCCHHHHHHHHHHHHHHHhccHH
Confidence 887778889999999999999987 899999999999988852 246678999999999999999998777889
Q ss_pred HHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEe
Q 010250 402 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMS 479 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~ 479 (514)
++++++++++++.|+++ .+++.+..+++.|+++++++.+. ...+...|.++||++.+.+ +.|||+
T Consensus 290 ~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~-------------~~~~~~~l~~~gv~v~~~g~~~lRi~ 356 (377)
T PRK02936 290 EEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECTEE-------------VAPVIEQLREEGLLVLSAGPNVIRLL 356 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEEEecch-------------HHHHHHHHHHCCeEEecCCCCEEEEE
Confidence 99999999999999985 55777888889999999998642 3457788999999999876 679999
Q ss_pred CCCCCCHHHHHHHHHHHHHHH
Q 010250 480 PPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 480 p~~~~t~e~id~~~~~l~~~l 500 (514)
||+.+|+++|++++++|++++
T Consensus 357 p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 357 PPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred CCcccCHHHHHHHHHHHHHhC
Confidence 999999999999999998764
No 79
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=100.00 E-value=5.2e-57 Score=468.10 Aligned_cols=375 Identities=29% Similarity=0.498 Sum_probs=314.6
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++.+++|+|+||+|||+||||.+++++.++||+||+|.+|+.++++++.+.+.. ..++...+++++|+++++
T Consensus 23 ~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~--- 97 (401)
T PRK00854 23 LDVVLTRGEGVWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRA--FRNDQLAPLYEELAALTG--- 97 (401)
T ss_pred CCceEEeeeeCEEEECCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccc--cCCHHHHHHHHHHHhhCC---
Confidence 678899999999999999999999999999999999999999999999987654332 246778899999999863
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhh-cC-CCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNA-LG-RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 239 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~-~~-~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 239 (514)
.++++|++||+||++.|+++++.|+.. .+ .++|++||+++.+|||++...+++++.+..+..+.+..+.+..++.+
T Consensus 98 ~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 175 (401)
T PRK00854 98 SHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFG-- 175 (401)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCCC--
Confidence 469999999999999999999987432 12 23567999999999999988887777665544444333333333222
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250 240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319 (514)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr 319 (514)
+.+++++.+. +++++|++||++|++|.+.|+++||++|+++|++||+++|+||+|+|||+
T Consensus 176 ----------------d~~~le~~i~----~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~ 235 (401)
T PRK00854 176 ----------------DAEALEAAIT----PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGR 235 (401)
T ss_pred ----------------CHHHHHHHhC----CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCC
Confidence 2467777764 46899999999999999999999999999999999999999999999999
Q ss_pred ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 399 (514)
Q Consensus 320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~ 399 (514)
+|++++.+++++.||++++||+|+||++|+|++++++++++.+.. ..++.||+++|+++++++++|+.+++++
T Consensus 236 ~g~~~~~~~~g~~~D~~~~~K~l~gg~~~ig~v~~~~~~~~~l~~-------~~~~~t~~~~~~~~aa~~a~L~~l~~~~ 308 (401)
T PRK00854 236 TGKLLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKP-------GQHGSTFGGNPLACAVARAALKVLTEEG 308 (401)
T ss_pred CchHhHHhhcCCCCCEEEecccccCCccCeEEEEEcHHHHhcccC-------CCCCCCCCcCHHHHHHHHHHHHHHHHcC
Confidence 998777788999999999999999998899999999999987752 2466789999999999999999988778
Q ss_pred HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCEEEE
Q 010250 400 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIMM 478 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~iRi 478 (514)
+.++++++++++.+.|+++. .+.+..+++.|.++.+.+..... ....+++.|+++||++.+. ++.|||
T Consensus 309 ~~~~~~~~~~~l~~~L~~~~-~~~~~~~~g~g~~~~i~~~~~~~----------~~~~~~~~L~~~GV~v~~~~~~~lR~ 377 (401)
T PRK00854 309 MIENAAEMGAYFLEGLRSIR-SNIVREVRGRGLMLAVELEPEAG----------GARQYCEALKERGLLAKDTHDHTIRL 377 (401)
T ss_pred HHHHHHHHHHHHHHHHHhhc-cCceEEEeccceEEEEEEecCch----------hHHHHHHHHHHCCeEEecCCCCEEEE
Confidence 99999999999999999872 34456788999999998854311 1456889999999999875 468999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHH
Q 010250 479 SPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 479 ~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
+||+.+|+++|++++++|++++.
T Consensus 378 ~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 378 APPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred eCCcccCHHHHHHHHHHHHHHhh
Confidence 99999999999999999998763
No 80
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=100.00 E-value=3.1e-56 Score=462.28 Aligned_cols=381 Identities=32% Similarity=0.534 Sum_probs=315.2
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++.+++|+|+||.|||+||||++|+++.++||+||+|++|+.++++++.+.+..+ .++...++++.+.+++ +
T Consensus 13 ~~~~~~~~~G~~~~d~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~---~ 87 (400)
T PTZ00125 13 LPVVLKRGKGVFVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAF--YNDVLGLAEKYITDLF---G 87 (400)
T ss_pred CCccEEeeecCEEEeCCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccccc--cCHHHHHHHHHHHhCC---C
Confidence 6789999999999999999999999999999999999999999999998876554322 3456677888887765 4
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhc-C-CCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNAL-G-RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 239 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~-~-~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 239 (514)
.++++|++||+|||+.|+++++.++... + .+++++||+++++|||++...++.++.......+....+.+..+++
T Consensus 88 ~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 164 (400)
T PTZ00125 88 YDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDY--- 164 (400)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCC---
Confidence 6799999999999999999998664221 1 1356899999999999999988877654333222221121111111
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250 240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319 (514)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr 319 (514)
++++++++.+. .+++++|++||+++++|++.|+++|+++|+++|++||+++|+||||+||||
T Consensus 165 ---------------~d~~~le~~l~---~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~ 226 (400)
T PTZ00125 165 ---------------NDVEALEKLLQ---DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGR 226 (400)
T ss_pred ---------------CCHHHHHHHhC---CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 23577887774 257999999999999999999999999999999999999999999999999
Q ss_pred ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 399 (514)
Q Consensus 320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~ 399 (514)
+|+++..+.+++.||++++||++++|++|+|++++++++++.+.. ..++.|++++|++++++.++|+.+++++
T Consensus 227 ~G~~~~~~~~~~~pd~~~~sK~l~~g~~~ig~v~~~~~~~~~~~~-------~~~~~t~~~~~~~~~aa~~~l~~i~~~~ 299 (400)
T PTZ00125 227 TGKLLAHDHEGVKPDIVLLGKALSGGLYPISAVLANDDVMLVIKP-------GEHGSTYGGNPLACAVAVEALEVLKEEK 299 (400)
T ss_pred cchhhHHHhcCCCCCEEEEcccccCCCcCcEEEEEcHHHHhhccC-------CCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 998878888899999999999999997799999999999988753 2456789999999999999999998888
Q ss_pred HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEE
Q 010250 400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIM 477 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iR 477 (514)
+.+++++++++++++|+++ ..++.+..+++.|+++++.+..... .....+.+.|+++||++.+.+ +.||
T Consensus 300 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~v~~~~~~~---------~~~~~~~~~l~~~Gv~v~~~~~~~lR 370 (400)
T PTZ00125 300 LAENAQRLGEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFDHSDG---------VNAWDLCLKLKENGLLAKPTHDNIIR 370 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEEecccEEEEEEEccCcc---------hHHHHHHHHHHHCCeEEeecCCCEEE
Confidence 9999999999999999887 4567777889999999998864211 024568889999999998865 6799
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 478 MSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 478 i~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
|+|++.+++++|++++++|++++.++.
T Consensus 371 i~~~~~~~~~~i~~~l~~l~~~l~~~~ 397 (400)
T PTZ00125 371 FAPPLVITKEQLDQALEIIKKVLKSFD 397 (400)
T ss_pred EECCccCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999887653
No 81
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=100.00 E-value=1.9e-56 Score=464.91 Aligned_cols=377 Identities=22% Similarity=0.358 Sum_probs=293.4
Q ss_pred CCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC
Q 010250 81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 160 (514)
Q Consensus 81 ~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~ 160 (514)
..|+++++++|+|+||.|||+||||.+++|+++|||+||+|++|+.+|++++... ..++....+++++|++.++
T Consensus 29 ~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~----~~~~~~~~~la~~l~~~~p-- 102 (431)
T PRK06209 29 LAPGFIQRGSGAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCNF----TRPSAIELDAAESFLELID-- 102 (431)
T ss_pred CCCeEEEeccCCEEEeCCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcCC----CCCCHHHHHHHHHHHHhCC--
Confidence 3689999999999999999999999999999999999999999999999986532 3345556689999999874
Q ss_pred CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEE-ecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250 161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIAR-QKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 239 (514)
Q Consensus 161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~-~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 239 (514)
+.++|+|+|||+||||.|+|+||.| ++|.+|+.+ .++|||........+ +. . .+.+.... . .+
T Consensus 103 ~~~~v~f~~sGseA~e~AlklAr~~------tgr~~i~~~~~~~~h~~~~~~~g~~--~~-~--~~~~~~~~-~--~~-- 166 (431)
T PRK06209 103 GADMVKFCKNGSDATSAAVRLARAY------TGRDLVARCADHPFFSTDDWFIGTT--PM-S--AGIPASVS-A--LT-- 166 (431)
T ss_pred ccceEEEecCHHHHHHHHHHHHHHH------hCCCeEEEeccCccccccccccccC--CC-C--CCCChhHh-c--cc--
Confidence 3579999999999999999999988 567889998 677876421111000 00 0 00000000 0 00
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250 240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319 (514)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr 319 (514)
..+.+++++++++++.+ .++++++||+||++++ .|+++||++|+++|++||++||+|||||||++
T Consensus 167 ----------~~~~~~d~~~l~~~l~~-~~~~~aavi~Epv~g~----~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~ 231 (431)
T PRK06209 167 ----------VTFRYNDIASLEALFED-HPGRIACVILEPATAD----EPQDGFLHEVRRLCHENGALFILDEMITGFRW 231 (431)
T ss_pred ----------cccCCCCHHHHHHHHHh-CCCCEEEEEEccccCC----CCCHHHHHHHHHHHHHcCCEEEEEcccccCCc
Confidence 01223446888888864 3468999999999986 77889999999999999999999999999977
Q ss_pred ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHH--hhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh
Q 010250 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEV--IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE 397 (514)
Q Consensus 320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~--l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~ 397 (514)
++ .+..+++++.||++|+||+|+|| +|+|++++++++++. +... ...+.+.|++|+++||++|++++++|+++++
T Consensus 232 ~~-~g~~~~~gv~PDi~t~gK~lggG-~p~~av~~~~~i~~~~~~~~~-~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~ 308 (431)
T PRK06209 232 HM-RGAQKLYGIVPDLSCFGKALGNG-FAVSALAGKREYMELGGLEHT-DRERVFLLSTTHGAETHALAAAIATMAIYRD 308 (431)
T ss_pred Cc-chhhHHhCCCcceeeehhhhcCC-cccEEEEEHHHHHhhhccccc-CCCCceeeccCCCCCHHHHHHHHHHHHHHhc
Confidence 53 33445689999999999999999 799999999999987 3211 1123556889999999999999999999998
Q ss_pred ccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEE
Q 010250 398 RNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNI 476 (514)
Q Consensus 398 ~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~i 476 (514)
+++.+++++++++|++.|+++ .+++++..+++.|++..+.+........+ .......+...|+++|+++. .+
T Consensus 309 ~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~Gi~~p----~l 381 (431)
T PRK06209 309 EDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQP---SQAFRTLFLQETIRRGVLMP----SL 381 (431)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcccCC---cHHHHHHHHHHHHHCCcccc----cc
Confidence 899999999999999999987 56788888999999888877532211111 11233467788999999863 24
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250 477 MMSPPFIMSPEEVDELISKYGKALKATEER 506 (514)
Q Consensus 477 Ri~p~~~~t~e~id~~~~~l~~~l~~~~~~ 506 (514)
+++ ..+|++||++++++|+++++++.+.
T Consensus 382 ~is--~~ht~~dId~~l~~l~~~l~~~~~~ 409 (431)
T PRK06209 382 VVS--YAHGDADIERTIDAVHGALGVYRKA 409 (431)
T ss_pred ccc--ccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 455 6779999999999999999887543
No 82
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.7e-54 Score=445.05 Aligned_cols=363 Identities=27% Similarity=0.444 Sum_probs=300.1
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++++|+|+||+||++||||.|++++.+||| ||+|++|+.++++++..+... ...+...++++.+... .
T Consensus 11 ~~~~~~~~~G~~l~d~dg~~~lD~~s~~~~~~lG~-~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~la~~l~~~----~ 83 (375)
T PRK04260 11 AAIEFVKAEGNYLIDTDGKKYLDFSSGIGVTNLGF-HPQVQQALQKQAGLIWHSPNL--YLNSLQEEVAQKLIGD----K 83 (375)
T ss_pred CCceEEEeeeCEEEeCCCCEEEECCCCcccccCCC-CHHHHHHHHHHHHhcCcccCc--cCCHHHHHHHHHHhcC----c
Confidence 57899999999999999999999999999999999 999999999999875433221 1344455566555432 2
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
...++|++||+|||+.|+++++.+ +++.+||+++++|||++..+++.++.+...+.+.+..+.+... +
T Consensus 84 ~~~~~~~~SGseA~~~Al~~ar~~------~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---- 151 (375)
T PRK04260 84 DYLAFFCNSGAEANEAAIKIARKA------TGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA--I---- 151 (375)
T ss_pred CCEEEEcCccHHHHHHHHHHHHHh------cCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe--C----
Confidence 236899999999999999999876 4577999999999999988888877655444444221111100 0
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G 321 (514)
+++.+++++.+. +++++|++||+++++|++.++++||++++++|++||+++|+||+|+|||++|
T Consensus 152 ------------~~dl~~l~~~l~----~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g 215 (375)
T PRK04260 152 ------------FNDLNSVKALVN----KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTG 215 (375)
T ss_pred ------------CCCHHHHHHhcC----CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc
Confidence 112566776653 4689999999999999999999999999999999999999999999999999
Q ss_pred ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV 401 (514)
Q Consensus 322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~ 401 (514)
.++.++.+++.||++||||+|++| +|+|++++++++++.+.. ..+.+||+++|++++++.++|+.++++++.
T Consensus 216 ~~~~~~~~~~~pdi~t~sK~l~~G-~~ig~~~~~~~~~~~~~~-------~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~ 287 (375)
T PRK04260 216 KLYAFEHYGIEPDIFTLAKGLANG-VPVGAMLAKSSLGGAFGY-------GSHGSTFGGNKLSMAAASATLDIMLTAGFL 287 (375)
T ss_pred chhhhHhhCCCCCEEEecccccCC-cceEEEEEcHHHHhhcCC-------CCCCCCCCcCHHHHHHHHHHHHHHHhhHHH
Confidence 877878889999999999999988 899999999999888752 246789999999999999999999878899
Q ss_pred HHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEe
Q 010250 402 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMS 479 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~ 479 (514)
+++++.++++++.|.++ .+++.+..+++.|+++++++... ...+.+.|+++||++.+.+ +.||++
T Consensus 288 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~-------------~~~~~~~l~~~Gi~v~~~~~~~lR~~ 354 (375)
T PRK04260 288 EQALENGNYLQEQLQKALQDKETVTTVRGLGYMIGIETTAD-------------LSQLVEAARDKGLIVLTAGTNVIRLL 354 (375)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCeeEEeccceEEEEEecCc-------------HHHHHHHHHhCCCEEecCCCCEEEEc
Confidence 99999999999999876 55666778889999999998421 3458899999999998766 579999
Q ss_pred CCCCCCHHHHHHHHHHHHHHH
Q 010250 480 PPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 480 p~~~~t~e~id~~~~~l~~~l 500 (514)
||+.+|++||++++++|++++
T Consensus 355 ~~~~~t~~~i~~~l~~l~~~~ 375 (375)
T PRK04260 355 PPLTLTKEEIEQGIAILSEVF 375 (375)
T ss_pred CCCccCHHHHHHHHHHHHHhC
Confidence 999999999999999998753
No 83
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.3e-53 Score=442.17 Aligned_cols=372 Identities=33% Similarity=0.590 Sum_probs=311.0
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++++|+++||.|||+||||.+|+++++|||+||+|.+|+.+++++...... ..+.+...+++++|++.. +
T Consensus 21 ~~~~~~~~~G~~~~d~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~la~~l~~~~---~ 95 (396)
T PRK02627 21 LPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSN--LYYIEPQEELAEKLVELS---G 95 (396)
T ss_pred CCceEEeeeeCEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhcccccc--ccCCHHHHHHHHHHHhhc---C
Confidence 68899999999999999999999999999999999999999999999987543222 235677889999999985 4
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
.++++|++||+||++.|+++++.+....+ .++.+|++++++|||++..+++.++.+.++..+....+.+..++
T Consensus 96 ~~~v~~~~gg~eA~~~al~~a~~~~~~~~-~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 168 (396)
T PRK02627 96 MDKVFFCNSGAEANEAAIKLARKYGHKKG-IEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVP------ 168 (396)
T ss_pred CCEEEECCCcHHHHHHHHHHHHHHhcccC-CCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeC------
Confidence 68999999999999999999987743222 12378999999999999888888776544333322111111111
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G 321 (514)
+++++++++++. +++++|++||+++++|+.+++++++++|+++|++||++||+||+|+||||+|
T Consensus 169 ------------~~d~~~l~~~i~----~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g 232 (396)
T PRK02627 169 ------------FNDIEALKAAIT----DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTG 232 (396)
T ss_pred ------------CCCHHHHHHhcC----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccC
Confidence 112467777663 5789999999999999888899999999999999999999999999999999
Q ss_pred ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV 401 (514)
Q Consensus 322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~ 401 (514)
++++++.+++.||+++|||++++| +|+|++++++++++.+.. ..+..|+++||++++++.++|+.++++++.
T Consensus 233 ~~~~~~~~~~~pdi~t~sK~~~~G-~rig~~~~~~~~~~~~~~-------~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~ 304 (396)
T PRK02627 233 KLFAYQHYGIEPDIMTLAKGLGGG-VPIGAVLAKEKVADVFTP-------GDHGSTFGGNPLACAAALAVIEIIEEEGLL 304 (396)
T ss_pred ceeeehhcCCCCCEEEEcchhhCC-cccEEEEEcHHHHhccCC-------CCCCCCCCCCHHHHHHHHHHHHHHhhccHH
Confidence 888888889999999999999987 899999999999888752 246689999999999999999998888899
Q ss_pred HHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEe
Q 010250 402 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMS 479 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~ 479 (514)
++++++++++++.|+++ .+++.+..+++.|+++++++.. . ...+...|+++||++.+.+ +.+||+
T Consensus 305 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~-~------------~~~~~~~l~~~Gv~v~~~~~~~lRi~ 371 (396)
T PRK02627 305 ENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIELDR-P------------AAEIVKKALEKGLLINVTGDNVLRLL 371 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeeeccCcEEEEEEecC-c------------HHHHHHHHHHCCeEEeecCCCEEEEE
Confidence 99999999999999887 4567777888999999998831 1 3468889999999999866 569999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHH
Q 010250 480 PPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 480 p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
|++.+|+++|++++++|++++++
T Consensus 372 ~~~~~~~~~i~~~~~~l~~~l~~ 394 (396)
T PRK02627 372 PPLIISKEEIDEAVDRLEEVLKE 394 (396)
T ss_pred CCcccCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998865
No 84
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=100.00 E-value=3.3e-53 Score=441.61 Aligned_cols=395 Identities=35% Similarity=0.641 Sum_probs=321.4
Q ss_pred CCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC
Q 010250 81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 160 (514)
Q Consensus 81 ~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~ 160 (514)
..|+++++++|+++||.|||+||||.+|+++++|||+||+|++|+.++++++..+...+ +.++...+++++|+++++.
T Consensus 17 ~~~~~~~~~~g~~~~d~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~- 94 (413)
T cd00610 17 PYPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGF-FYNEPAVELAELLLALTPE- 94 (413)
T ss_pred CCCceEEeeecCEEEeCCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCcc-cCCHHHHHHHHHHHHhCCC-
Confidence 47899999999999999999999999999999999999999999999998765443221 2567889999999999842
Q ss_pred CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcc
Q 010250 161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW 240 (514)
Q Consensus 161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
+.++++|++||+||++.|+++++.+ +++++||+++++|||++..++..++.+.+...+......+..++.+..+
T Consensus 95 ~~~~v~~~~sgsea~~~al~~~~~~------~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (413)
T cd00610 95 GLDKVFFVNSGTEAVEAALKLARAY------TGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRY 168 (413)
T ss_pred CCCEEEEcCcHHHHHHHHHHHHHHH------cCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccc
Confidence 5789999999999999999999866 4578999999999999988888777654443333322333333332111
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 320 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~ 320 (514)
+. ......++++|++++... ++++++|++||+++++|.+.|+++|+++|+++|++||+++|+||+|+||||+
T Consensus 169 ~~-------~~~~~~d~~~l~~~l~~~-~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~ 240 (413)
T cd00610 169 RP-------PAELADDLEALEEALEEH-PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRT 240 (413)
T ss_pred cc-------hhhHHHHHHHHHHHHhcC-CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC
Confidence 10 011223467777777532 3579999999999999999999999999999999999999999999999999
Q ss_pred cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250 321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI 400 (514)
Q Consensus 321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~ 400 (514)
|..+..+++++.||++++||++++| +|+|++++++++++.+.. ..+.+.+|++++|++++++.++|+.++++++
T Consensus 241 g~~~~~~~~~~~~d~~t~sK~l~~g-~~~g~~~~~~~~~~~~~~-----~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~ 314 (413)
T cd00610 241 GKMFAFEHFGVEPDIVTLGKGLGGG-LPLGAVLGREEIMDAFPA-----GPGLHGGTFGGNPLACAAALAVLEVLEEEGL 314 (413)
T ss_pred cchhhHhhcCCCCCeEEEcccccCc-cccEEEEEcHHHHHhhcc-----CCCCCCCCCCcCHHHHHHHHHHHHHHHhccH
Confidence 9887888899999999999999998 899999999999998711 2345778999999999999999999988889
Q ss_pred HHHHHHHHHHHHhhhhhcc-CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCEEEE
Q 010250 401 VEQVNKIAPKFQDGVKAFS-DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIMM 478 (514)
Q Consensus 401 ~~~~~~~~~~l~~~L~~l~-~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~iRi 478 (514)
.++++++++++++.|+++. ..+.+..+++.|.++++.+.+...... .+......+.+.|.++||++.+. ++.+|+
T Consensus 315 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~gv~v~~~~~~~lR~ 391 (413)
T cd00610 315 LENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKP---PDKELAAKIIKAALERGLLLRPSGGNVIRL 391 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCC---cchHHHHHHHHHHHHCCeEEeecCCCEEEE
Confidence 9999999999999999873 346677788999999999875422110 01113566888999999999987 467999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHH
Q 010250 479 SPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 479 ~p~~~~t~e~id~~~~~l~~~l 500 (514)
+|++.+|++||++++++|++++
T Consensus 392 ~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 392 LPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred ECCCcCCHHHHHHHHHHHHHhC
Confidence 9999999999999999998764
No 85
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-48 Score=368.37 Aligned_cols=391 Identities=24% Similarity=0.393 Sum_probs=305.5
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHH-Hhc-CCccccccccCCchHHHHHHHHHHhc--
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQ-LNT-LPFYHSFWNRTTKPSLDLAKELLEMF-- 157 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~-l~~-~~~~~~~~~~~~~~~~ela~~L~~~~-- 157 (514)
+++-..++-|.|++|+|||.+||.++.+.+++||+|||.+++++.+- .-+ +......-+. +..++++.|.+-+
T Consensus 58 F~~dYEkS~GNYlvDvDGN~lLDvYsQIsSvplGYn~P~LvK~a~~p~~~~~lvnRPALg~f---P~kd~~~~l~~~ll~ 134 (484)
T KOG1405|consen 58 FFVDYEKSIGNYLVDVDGNRLLDVYSQISSVPLGYNNPALVKAAQQPQNATMLVNRPALGNF---PPKDFAEKLRQSLLS 134 (484)
T ss_pred EehhhhhhcCceEEecCCCeeehhhhhhcccccCCCCHHHHHHhcChHHHHHHhccccccCC---ChhhHHHHHHHHHHh
Confidence 44556899999999999999999999999999999999999987642 221 1111111111 2356666665522
Q ss_pred -CcCCCCeEEEeCChhHHHHHHHHHHHHHHhh--cCC----------------C--CccEEEEEecCCcccceeeeecCC
Q 010250 158 -TASKMAKVFFTNSGSEANDTQVKLVWYYNNA--LGR----------------P--NKKKFIARQKSYHGSTLIAASLSG 216 (514)
Q Consensus 158 -~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~--~~~----------------~--~~~~ii~~~~~yHG~t~~~~~~s~ 216 (514)
.+.+++.|.++-+|+.|||.|+|.|..+.++ +|. | ..-.|+.|.++|||+++++++.+.
T Consensus 135 ~APKG~~~v~tm~cGs~aNEnA~K~afiwy~~k~rg~~~~s~~e~eScm~n~aPg~P~lsvlsF~gaFHGR~~g~lstT~ 214 (484)
T KOG1405|consen 135 IAPKGQKQVITMLCGSCANENAYKTAFIWYRAKERGQAGFSAEELESCMINQAPGAPDLSVLSFKGAFHGRTFGSLSTTH 214 (484)
T ss_pred hCcchHHHHHHHhccccccHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCCCCceeeeeecccccccccccccccc
Confidence 2457899999999999999999988443322 221 1 134699999999999999999888
Q ss_pred CccccCCCCCCCCcccccCCCCcccCCCCCCChhH--HHHHHHHHHHHHHHHhC--CCcEEEEEEccccCCCCcccCChh
Q 010250 217 LPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE--YSTRLANNLEDLILKEG--PETIAAFIAEPVIGAGGVIPPPAT 292 (514)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~le~li~~~~--~~~~aavivEpv~~~~G~~~p~~~ 292 (514)
+..+++ .++|.-.+++.++|. ++|++.....+. -...|++++|++|.+.. ...+|++||||+|++||+...+++
T Consensus 215 SKpIHK-ldiPaFdWPiA~fP~-ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~ 292 (484)
T KOG1405|consen 215 SKPIHK-LDIPAFDWPIAPFPR-YKYPLDENVAENKKEDQGCLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPD 292 (484)
T ss_pred Cccccc-cCCCCCCCCCCCCcc-ccCChhhhhhhhhhhhhhHHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHH
Confidence 776653 344444455566654 355544321111 12346788999987643 247999999999999999999999
Q ss_pred HHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCC--Cchhchhhhhc-CCcccceeEEeCHHHHHHhhhccCCC
Q 010250 293 YFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK--PDLVSFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTL 369 (514)
Q Consensus 293 ~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~--pDiv~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~ 369 (514)
|++.|+++|+|||+.+|+||||||-|-||+.|++++|++. ||+|||||.|- ||+ .-.+++ .+.
T Consensus 293 Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~vTFSKK~q~gGf------fh~~~f----rpn---- 358 (484)
T KOG1405|consen 293 FFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVVTFSKKFQTGGF------FHDEEF----RPN---- 358 (484)
T ss_pred HHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCccceehhhhhhcCcc------ccCccc----CCC----
Confidence 9999999999999999999999999999999999999985 99999999654 443 223332 211
Q ss_pred CcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCC-ceeEEEeeeeeEEEEEccCCCCCCC
Q 010250 370 GSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEP 447 (514)
Q Consensus 370 ~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~ 447 (514)
.++.+..||.|.|.-.....+++++++++++.+++...++.|..+|.++ .++| .+..+||+|.++++++....
T Consensus 359 ~pYrifNTWmGdP~k~lll~~vv~~I~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps~~----- 433 (484)
T KOG1405|consen 359 EPYRIFNTWMGDPSKNLLLEEVVQEIKREDLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPSGS----- 433 (484)
T ss_pred chHHHhhhhcCChHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCCChH-----
Confidence 2456678999999999989999999999999999999999999999999 5676 56789999999999997654
Q ss_pred CCCccchHHHHHHHHHHCCcEEEeeCC-EEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 448 FPPEWGIGAYFGAQCEKHGMLVRVSGD-NIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 448 ~~~~~~~~~~~~~~l~~~Gv~~~~~g~-~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
..+.++..++-+|+.+..+|. .|||.|+++.++...+-++++|++.+..
T Consensus 434 ------~Rdk~i~~~~~nGv~~GGCg~~siRfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 434 ------IRDKLILIARLNGVNLGGCGDKSIRFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred ------HHHHHHHHHHHcCceecccccceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence 356688899999999998876 5999999999999999999999998754
No 86
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=100.00 E-value=2.7e-47 Score=392.64 Aligned_cols=370 Identities=36% Similarity=0.614 Sum_probs=297.6
Q ss_pred CCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC
Q 010250 81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 160 (514)
Q Consensus 81 ~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~ 160 (514)
+.|+++++++|+++||.||++||||.+|+|+++|||+||.|.+++.+++++....... .+.+...+++++|++++
T Consensus 8 ~~~~~~~~~~g~~~~~~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~la~~~--- 82 (379)
T TIGR00707 8 RLPVKIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNL--YYTEPQEELAEKLVEHS--- 82 (379)
T ss_pred CCCccEEEeecCEEEeCCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccc--cCCHHHHHHHHHHHhhC---
Confidence 3789999999999999999999999999999999999999999999999875432221 25677899999999997
Q ss_pred CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcc
Q 010250 161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW 240 (514)
Q Consensus 161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
+.+++++++||+||++.|+++++.+....+ +++++|++++++|||+...+...++.+.+...+.+..+.....
T Consensus 83 g~~~~~~~~sg~~a~~~a~~~~~~~~~~~~-~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 155 (379)
T TIGR00707 83 GADRVFFCNSGAEANEAALKLARKYTGDKG-KEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYA------ 155 (379)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHhhccC-CCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceee------
Confidence 456999999999999999998876543222 2368999999999999888777666543322111111111000
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 320 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~ 320 (514)
.+++.+++++.+. +++++|++||+++++|.++++.+++++|.++|++||+++|+||+|+|||+.
T Consensus 156 ------------~~~d~~~l~~~~~----~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~ 219 (379)
T TIGR00707 156 ------------PYNDIESLKKAID----DETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRT 219 (379)
T ss_pred ------------CCCCHHHHHHHhh----hCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcc
Confidence 0112567777664 357899999999999988888999999999999999999999999999998
Q ss_pred cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250 321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI 400 (514)
Q Consensus 321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~ 400 (514)
|..+..+..++.||+++|||++++| +|+|++++++++++.+.. ..++.+++.++++++++.++|+.+++.++
T Consensus 220 g~~~~~~~~~~~~d~~t~sK~~~~G-~riG~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~aa~aaL~~~~~~~~ 291 (379)
T TIGR00707 220 GKFFAYEHYGIEPDIITLAKGLGGG-VPIGATLAKEEVAEAFTP-------GDHGSTFGGNPLACAAALAVLEVIEKERL 291 (379)
T ss_pred chhhhHHhcCCCCCEEEEcccccCC-cccEEEEEcHHHHhhhcC-------CCCCCCCCCCHHHHHHHHHHHHHHHhhhH
Confidence 8766666778899999999999977 899999999999988863 23556788999999999999998877778
Q ss_pred HHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEE
Q 010250 401 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMM 478 (514)
Q Consensus 401 ~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi 478 (514)
.+++++++++++++|+++ ...+. ..+++.|.++++.+.+. ...+.+.|+++||++.+.+ +.+||
T Consensus 292 ~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~g~~~~~~~~~~-------------~~~~~~~l~~~Gv~v~~~~~~~lRi 357 (379)
T TIGR00707 292 LENVKEKGDYFKERLEELGKNYPN-KEVRGKGLMLGIELEAP-------------CKDIVKKALEKGLLVNCAGPKVLRF 357 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCC-CccccCceEEEEEecCc-------------HHHHHHHHHHCCcEEeeCCCCEEEE
Confidence 999999999999999876 33332 34556788888887532 2457888999999999876 67999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHH
Q 010250 479 SPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 479 ~p~~~~t~e~id~~~~~l~~~l 500 (514)
+|++.+|++++++++++|++++
T Consensus 358 ~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 358 LPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred ECCCcCCHHHHHHHHHHHHHhC
Confidence 9999999999999999998763
No 87
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=5.1e-40 Score=345.57 Aligned_cols=386 Identities=15% Similarity=0.208 Sum_probs=286.8
Q ss_pred cccccccccccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCC-CCHHHHHHHHHH
Q 010250 50 DASSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQ 128 (514)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~ 128 (514)
+.+.++.+++.++|.|+|++.|.+.... ....++.+++|++++ +||++||||.++ +++|. +||+|++|+.++
T Consensus 63 ~~~~~~~~~l~~~~~p~~l~~~~~~~~~---~~~~~~~~~~G~~i~-~~G~~~id~~s~---~~lgl~~~~~i~ea~~~a 135 (481)
T PLN02822 63 PLTEKEIDELCDEWTPEPLIPPITEEMR---PEPPVLESAAGPHTI-INGKDVVNFASA---NYLGLIGNEKIKESCTSA 135 (481)
T ss_pred CCCHHHHHHHHhcCCCCCCCCCCchhcc---ccCCceecCCCCeEE-ECCceEEEeECC---CcCCCCCCHHHHHHHHHH
Confidence 4566777888999999999977555433 234478999999999 899999999988 55665 699999999999
Q ss_pred HhcCCcccc---ccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCc
Q 010250 129 LNTLPFYHS---FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYH 205 (514)
Q Consensus 129 l~~~~~~~~---~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yH 205 (514)
+++++..++ .++++++.+.+|+++|+++++. .+.++|++ |..++.++++.. .++.++|++++.||
T Consensus 136 l~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~--~~~i~~s~-G~~a~~sai~a~---------~~~gd~Ii~d~~~H 203 (481)
T PLN02822 136 LEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGT--PDSILYSY-GLSTIFSVIPAF---------CKKGDIIVADEGVH 203 (481)
T ss_pred HHHhCCCCcccCccccCHHHHHHHHHHHHHHhCC--CCEEEECC-HHHHHHHHHHHh---------CCCCCEEEEeCCcc
Confidence 998554322 3456889999999999999853 35666665 445788888754 45667888999999
Q ss_pred ccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC------CCcEEEEEEcc
Q 010250 206 GSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG------PETIAAFIAEP 279 (514)
Q Consensus 206 G~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~------~~~~aavivEp 279 (514)
++...++.+++..... ++ +++.++++..+.+.. ++..++|++|+
T Consensus 204 ~s~~~~~~ls~~~~~~------------~~------------------~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~ 253 (481)
T PLN02822 204 WGIQNGLYLSRSTIVY------------FK------------------HNDMESLRNTLEKLTAENKRKKKLRRYIVVEA 253 (481)
T ss_pred HHHHHHHHHcCCeEEE------------EC------------------CCCHHHHHHHHHHHhhhhcccCCCcEEEEEec
Confidence 9887666666532211 00 111344444443211 12238999999
Q ss_pred ccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc--CcccccccceecccCC---CCchhc--hhhhhcCCcccceeE
Q 010250 280 VIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC--AFGRLGTMFGCDKYSI---KPDLVS--FAKALSSAYMPIGAI 352 (514)
Q Consensus 280 v~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t--G~gr~G~~~~~~~~gv---~pDiv~--~sK~l~gG~~pig~v 352 (514)
+++++|.+.| |++|+++|++||++||+||+|+ .+|++|.+ ..+++++ .+|+++ |||+++.. -|++
T Consensus 254 i~~~~G~i~~----L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G-~~e~~~v~~~~~dii~~s~sKalg~~---GG~i 325 (481)
T PLN02822 254 IYQNSGQIAP----LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRG-LSEHFGVPIEKIDIITAAMGHALATE---GGFC 325 (481)
T ss_pred CCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCC-hHHHcCCCCCCCeEEEecchhhhhhC---CeEE
Confidence 9999999998 9999999999999999999998 44666654 6788988 689887 88999732 2678
Q ss_pred EeCHHHHHHhhhccCCCCcccccCCCCCc--HHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEe
Q 010250 353 LVSPEVSEVIHSQSNTLGSFSHGFTYSGH--PVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG 429 (514)
Q Consensus 353 ~~~~~i~~~l~~~~~~~~~~~~~~t~~~~--pl~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g 429 (514)
++++++++.+.. ..++++|+++ |..+++++++|+.+++ +++.+++++++++|++.|+++.+.++ ...+
T Consensus 326 ~g~~~ii~~~~~-------~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~--~~~~ 396 (481)
T PLN02822 326 TGSARVVDHQRL-------SSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIPGLSI--GSNT 396 (481)
T ss_pred EcCHHHHHHHHh-------cCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCccc--CCCC
Confidence 899999998863 2566788776 8889999999998876 57889999999999999987633222 1123
Q ss_pred eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee----------CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250 430 TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS----------GDNIMMSPPFIMSPEEVDELISKYGK 498 (514)
Q Consensus 430 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~----------g~~iRi~p~~~~t~e~id~~~~~l~~ 498 (514)
.+.++.+.+.+... ....+......+++.|+ ++||++.+. ...+|++....+|++||++++++|++
T Consensus 397 ~spi~~l~l~~~~~---~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~ 473 (481)
T PLN02822 397 LSPIVFLHLEKSTG---SAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKR 473 (481)
T ss_pred CCCEEEEEeCCCcc---cccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 56777787753211 11111123467888887 889999864 13599988888999999999999999
Q ss_pred HHHHHH
Q 010250 499 ALKATE 504 (514)
Q Consensus 499 ~l~~~~ 504 (514)
++.++.
T Consensus 474 ~~~~~~ 479 (481)
T PLN02822 474 VAASVL 479 (481)
T ss_pred HHHHHh
Confidence 988764
No 88
>PRK07505 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-38 Score=330.10 Aligned_cols=350 Identities=19% Similarity=0.242 Sum_probs=246.0
Q ss_pred CCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCC-CCCHHHHHHHHHHHhcCC---ccccccccCCchHHHHHHHHHHh
Q 010250 81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALG-GSEPRLVAAATAQLNTLP---FYHSFWNRTTKPSLDLAKELLEM 156 (514)
Q Consensus 81 ~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~l~~~~---~~~~~~~~~~~~~~ela~~L~~~ 156 (514)
+.++.+.+++|+++||.||++||||.++ .++| |+||+|++|+.+|+++.. ..++.....++...+++++|+++
T Consensus 27 ~~~~~~~~~~G~~~~d~~g~~~ld~~s~---~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~ 103 (402)
T PRK07505 27 LNGLTVGEREGILITLADGHTFVNFVSC---SYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSEL 103 (402)
T ss_pred cccceeeccCCccEEecCCceEEEeecC---CccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHH
Confidence 4667899999999999999999999885 7899 999999999999998743 11111123467789999999998
Q ss_pred cCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC
Q 010250 157 FTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC 236 (514)
Q Consensus 157 ~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 236 (514)
++ . ++++++||++|++.++++++.+. ..+++.++|+++++|||+..... ...... ..+..++.
T Consensus 104 ~~---~-~~~~~~sG~~a~~~ai~~~~~~~---~~~~~~~vi~~~~~~H~s~~~~~------~~~~~~----~~v~~~~~ 166 (402)
T PRK07505 104 FG---A-SVLTFTSCSAAHLGILPLLASGH---LTGGVPPHMVFDKNAHASLNILK------GICADE----TEVETIDH 166 (402)
T ss_pred hC---C-CEEEECChHHHHHHHHHHHHhcc---cCCCCCCEEEEchhhhHhHHhhh------hhhhcC----CeEEEeCC
Confidence 73 3 78888899999999999875421 11246679999999999532111 111100 11122221
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechh--
Q 010250 237 PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVI-- 314 (514)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~-- 314 (514)
+ +++++++++.. +..+++++||++++|+ +.+ +++|+++|++||++||+||+|
T Consensus 167 ~------------------d~~~l~~~~~~---~~~~~vl~~p~~~~G~-~~~----~~~i~~l~~~~~~~li~DEa~~~ 220 (402)
T PRK07505 167 N------------------DLDALEDICKT---NKTVAYVADGVYSMGG-IAP----VKELLRLQEKYGLFLYIDDAHGL 220 (402)
T ss_pred C------------------CHHHHHHHHhc---CCCEEEEEecccccCC-cCC----HHHHHHHHHHcCCEEEEECcccc
Confidence 1 24677776642 4578999999998855 444 899999999999999999998
Q ss_pred cCcccccccceecccCC-CCchh----chhhhhcCCcccceeEEe-CHHHHHHhhhccCCCCcccccCCCCCc--HHHHH
Q 010250 315 CAFGRLGTMFGCDKYSI-KPDLV----SFAKALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGH--PVSCA 386 (514)
Q Consensus 315 tG~gr~G~~~~~~~~gv-~pDiv----~~sK~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~--pl~~a 386 (514)
+|+|++|.+++.+++++ .||.+ ++||++++++ |+++. ++++++.+.. +.+.+||+++ +++++
T Consensus 221 ~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~~~~-------~~~~~t~~~~~~~~a~a 290 (402)
T PRK07505 221 SIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---GVIMLGDAEQIELILR-------YAGPLAFSQSLNVAALG 290 (402)
T ss_pred cCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---eEEEeCCHHHHHHHHH-------hCCCceeCCCCCHHHHH
Confidence 57899998777788887 68855 7999998752 56554 7888888863 2455666554 58999
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEE-EEEccCCCCCCCCCCccchHHHHHHHHHHC
Q 010250 387 VAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILG-TEFADNKSPNEPFPPEWGIGAYFGAQCEKH 465 (514)
Q Consensus 387 aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 465 (514)
++.++++++.++.+.+.... +++.++.+... ....+++.++++. +.+.+. .....+.+.|+++
T Consensus 291 a~~a~l~~~~~~~~~~~~~~----l~~~~~~~~~~-~~~~~~g~~~~i~~~~~~~~-----------~~~~~~~~~l~~~ 354 (402)
T PRK07505 291 AILASAEIHLSEELDQLQQK----LQNNIALFDSL-IPTEQSGSFLPIRLIYIGDE-----------DTAIKAAKQLLDR 354 (402)
T ss_pred HHHHHHHHHhccCcHHHHHH----HHHHHHHHHHH-HHhcCCCCCCCEEEEEeCCH-----------HHHHHHHHHHHHC
Confidence 99999997765554433222 22222221100 0112344555443 232210 0245688999999
Q ss_pred CcEEEee-------C-CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 466 GMLVRVS-------G-DNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 466 Gv~~~~~-------g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
||++++. + +.|||+|++.+|+||+++++++|++++++
T Consensus 355 Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 355 GFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred CCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 9999864 2 57999999999999999999999988753
No 89
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=1e-35 Score=308.94 Aligned_cols=334 Identities=17% Similarity=0.166 Sum_probs=250.9
Q ss_pred CCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250 98 NGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE 173 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse 173 (514)
+|+++|+|+|+ ++||. +||+|++|+.++++++.+. ++...+.++.+.+++++|+++++ .+++++++||++
T Consensus 43 ~~~~~~~~~sn---~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g---~~~~~~~~SG~~ 116 (406)
T PRK13393 43 GPREVTVWCSN---DYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG---KEAALLFTSGYV 116 (406)
T ss_pred CCccEEEeecc---cccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC---CCcEEEeCCcHH
Confidence 46899999999 88998 7999999999999986542 22223455678999999999984 368999999999
Q ss_pred HHHHHHHH-HHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250 174 ANDTQVKL-VWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY 252 (514)
Q Consensus 174 A~~~Alk~-a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (514)
||+.|++. ++. .+.++|+++..||+++..++..++.+.. .++
T Consensus 117 An~~ai~~l~~~--------~~g~~I~~~~~~H~s~~~~~~~~g~~~~------------~~~----------------- 159 (406)
T PRK13393 117 SNWAALSTLGSR--------LPGCVILSDELNHASMIEGIRHSRAEKR------------IFR----------------- 159 (406)
T ss_pred HHHHHHHHhhcC--------CCCCEEEEccchhHHHHHHHHHcCCeEE------------EeC-----------------
Confidence 99999995 431 1246889999999998777665443211 000
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-Cc-ccccccceecccC
Q 010250 253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AF-GRLGTMFGCDKYS 330 (514)
Q Consensus 253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~-gr~G~~~~~~~~g 330 (514)
+++.+++++++....++++++|++|++++++|.+.| +++|+++|++||+++|+||+|+ |+ |++|..+ .++++
T Consensus 160 -~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~-~~~~~ 233 (406)
T PRK13393 160 -HNDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAP----IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGI-AEREG 233 (406)
T ss_pred -CCCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhC----HHHHHHHHHHcCCEEEEECCccccccCCCCCch-hhhcC
Confidence 112466777776543446789999999999999988 9999999999999999999998 77 8887654 36666
Q ss_pred CC--Cchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc-HHHHHH
Q 010250 331 IK--PDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN-IVEQVN 405 (514)
Q Consensus 331 v~--pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~-~~~~~~ 405 (514)
+. +|++ +|||+++.. -|++++++++++.+.... . ...+|++.+|.+++++.++|+.+++.. ..++++
T Consensus 234 ~~~~~~i~~~tlsKa~g~~---GG~~~~~~~~~~~l~~~~---~--~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~ 305 (406)
T PRK13393 234 LADRLTIIEGTLAKAFGVM---GGYITGSAALCDFIRSFA---S--GFIFTTSLPPAVAAGALASVRHLKASSAERERHQ 305 (406)
T ss_pred CCCCCeEEEEeCchhhccc---CceeeCCHHHHHHHHHhC---c--CceecCccCHHHHHHHHHHHHHHhhCHHHHHHHH
Confidence 65 5776 899999842 266788999988886421 0 112467788999999999999886542 345667
Q ss_pred HHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee-------C-CEE
Q 010250 406 KIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-------G-DNI 476 (514)
Q Consensus 406 ~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~-------g-~~i 476 (514)
++++++++.|+++ ..+. +++.|.++.+.+.+.. ....+.+.|++ +||++.+. + +.|
T Consensus 306 ~~~~~l~~~L~~~-g~~~---~~~~~~i~~v~~~~~~-----------~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~i 370 (406)
T PRK13393 306 DRVARLRARLDKA-GIPH---LPNPSHIVPVMVGDPV-----------LCKQISDELLDRYGIYVQPINYPTVPRGTERL 370 (406)
T ss_pred HHHHHHHHHHHHc-CCCc---CCCCCCeEEEEeCCHH-----------HHHHHHHHHHHhCCEEEEeECCCCCCCCCceE
Confidence 8889999999875 3332 2456777777653210 24567788887 59999752 3 569
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 477 MMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 477 Ri~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
||+|++.+|++|||+++++|+++++++
T Consensus 371 Ris~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 371 RITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999987654
No 90
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=100.00 E-value=2.4e-34 Score=288.55 Aligned_cols=335 Identities=21% Similarity=0.302 Sum_probs=267.0
Q ss_pred CcEEEeCCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCc---cccccccCCchHHHHHHHHHHhcCcCCCCeEE
Q 010250 91 GSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPF---YHSFWNRTTKPSLDLAKELLEMFTASKMAKVF 166 (514)
Q Consensus 91 G~~~~d~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~---~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~ 166 (514)
+..++ .+|++++||+|+ ++||. +||++++|+.+++++.+. .++...++.+.+.+|+++|++++ +.+.++
T Consensus 31 ~~~~~-~~~~~~~nf~SN---dYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~---g~e~al 103 (388)
T COG0156 31 GLAIR-ADGRKVLNFCSN---DYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL---GAEAAL 103 (388)
T ss_pred Cccee-cCCceeEeeecc---CcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh---CCCcEE
Confidence 34444 569999999999 88998 699999999999988432 34566788999999999999998 567899
Q ss_pred EeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCC
Q 010250 167 FTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPG 246 (514)
Q Consensus 167 ~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (514)
+++||..||.+++-.. .+++++|+.+.-.|.+...++.+++.....
T Consensus 104 ~f~SGy~AN~~~i~~l---------~~~~dli~~D~lnHASiidG~rls~a~~~~------------------------- 149 (388)
T COG0156 104 LFSSGFVANLGLLSAL---------LKKGDLIFSDELNHASIIDGIRLSRAEVRR------------------------- 149 (388)
T ss_pred EEcccchhHHHHHHHh---------cCCCcEEEEechhhhhHHHHHHhCCCcEEE-------------------------
Confidence 9999999999999876 456889999999999988888877754432
Q ss_pred CChhHHHHHHHHHHHHHHHHhC--CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc--
Q 010250 247 ETEEEYSTRLANNLEDLILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-- 322 (514)
Q Consensus 247 ~~~~~~~~~~~~~le~li~~~~--~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~-- 322 (514)
|.|+|+++||+++++.. +.+...|++|.|+++.|++.| |++|.+||++||++|++||+|+ +|-.|+
T Consensus 150 -----f~HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiAp----L~~l~~L~~ky~a~L~VDEAHa-~Gv~G~~G 219 (388)
T COG0156 150 -----FKHNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAP----LPELVELAEKYGALLYVDEAHA-VGVLGPNG 219 (388)
T ss_pred -----ecCCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCC----HHHHHHHHHHhCcEEEEEcccc-ccccCCCC
Confidence 56777899999998732 115789999999999999999 9999999999999999999997 766775
Q ss_pred cceecccCCCCc---hh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh
Q 010250 323 MFGCDKYSIKPD---LV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE 397 (514)
Q Consensus 323 ~~~~~~~gv~pD---iv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~ 397 (514)
.+.++++|+.++ |+ ||||+||+.+ |+++++..+.+.+.... + ...++.+.+|..++++.++|+++++
T Consensus 220 rG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g~~~~~d~L~~~a---r--~~ifStalpP~~aaa~~~al~~l~~ 291 (388)
T COG0156 220 RGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAGSAALIDYLRNRA---R--PFIFSTALPPAVAAAALAALRILEE 291 (388)
T ss_pred ccHHHHhCCCCccceEEEEEchhhhcccC---ceeeCcHHHHHHHHHhC---C--ceeccCCCCHHHHHHHHHHHHHHHh
Confidence 445788888754 33 7999999733 78899999999998632 2 3346777889999999999999986
Q ss_pred -ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----
Q 010250 398 -RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---- 472 (514)
Q Consensus 398 -~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---- 472 (514)
.+..++++++..++++.++.. .++. ......++.+.+.++. .+..+...|+++|+++.+.
T Consensus 292 ~~~~r~~L~~~~~~~~~~~~~~-~~~~---~~s~s~I~pv~~gd~~-----------~a~~~s~~l~~~Gi~v~~i~~PT 356 (388)
T COG0156 292 GPERRERLQELAAFFRSLLKAL-GLVL---LPSESPIIPVILGDEE-----------RALEASRALLEEGIYVSAIRPPT 356 (388)
T ss_pred CHHHHHHHHHHHHHHHHHHHhc-CCcc---CCCCCCeeeeEeCCHH-----------HHHHHHHHHHHCCeeEeeecCCC
Confidence 467899999999999666653 1111 1223445566665533 3667888999999998732
Q ss_pred ---C-CEEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250 473 ---G-DNIMMSPPFIMSPEEVDELISKYGKA 499 (514)
Q Consensus 473 ---g-~~iRi~p~~~~t~e~id~~~~~l~~~ 499 (514)
| ..||++|...+|++||+.++++|.++
T Consensus 357 Vp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 357 VPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 2 46999999999999999999998764
No 91
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=100.00 E-value=5.5e-34 Score=295.74 Aligned_cols=335 Identities=20% Similarity=0.240 Sum_probs=248.1
Q ss_pred CCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250 98 NGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE 173 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse 173 (514)
+|+++++|.|+ ++||. +||+|++|+.++++++... ++...++++...+|+++|+++++ .+.+++++||++
T Consensus 43 ~~~~~~~~~sn---~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g---~~~~l~~~sG~~ 116 (402)
T TIGR01821 43 GAKDVTVWCSN---DYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG---KESALVFTSGYV 116 (402)
T ss_pred CCeeEEEeEcc---CcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC---CCeEEEECchHH
Confidence 56999999998 88998 6999999999999886543 22233467788999999999984 357899999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHH
Q 010250 174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS 253 (514)
Q Consensus 174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (514)
||+.+++++... .+..+|+.+..||+++..++..++.+... ++
T Consensus 117 an~~ai~~l~~~-------~~~~~v~~~~~~h~s~~~~~~~~g~~~~~------------~~------------------ 159 (402)
T TIGR01821 117 ANDATLATLAKI-------IPGCVIFSDELNHASMIEGIRHSGAEKFI------------FR------------------ 159 (402)
T ss_pred HHHHHHHHhhCC-------CCCCEEEEcchHhHHHHHHHHHcCCeEEE------------EC------------------
Confidence 999999987521 13467788888999877666554432210 00
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-Cc-ccccccceecccCC
Q 010250 254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AF-GRLGTMFGCDKYSI 331 (514)
Q Consensus 254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~-gr~G~~~~~~~~gv 331 (514)
+++.+++++++....++++++|++|++++++|.+.| +++|+++|++||++||+||+|+ |+ |..|.. ..+++++
T Consensus 160 ~~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~G~~g~~g~g-~~~~~~~ 234 (402)
T TIGR01821 160 HNDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAP----IEEICDLADKYGALTYLDEVHAVGLYGPRGGG-IAERDGL 234 (402)
T ss_pred CCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEeCcccccccCCCCCc-cchhccC
Confidence 112467888776544346789999999999999987 9999999999999999999998 43 455442 2456665
Q ss_pred --CCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc-cHHHHHHH
Q 010250 332 --KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER-NIVEQVNK 406 (514)
Q Consensus 332 --~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~-~~~~~~~~ 406 (514)
.+|++ +|||++++. .|++++++++++.+..... ...+|.+.+|.++++++++|+.+++. .+.++.++
T Consensus 235 ~~~~div~~t~sKa~g~~---GG~i~~~~~~~~~l~~~~~-----~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~ 306 (402)
T TIGR01821 235 MHRIDIIEGTLAKAFGVV---GGYIAASRKLIDAIRSYAP-----GFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQE 306 (402)
T ss_pred CCCCeEEEEechhhhccC---CceeecCHHHHHHHHHhCc-----CceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHH
Confidence 47877 899999842 2668889999988864211 12246678999999999999988754 35667788
Q ss_pred HHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee-------C-CEEE
Q 010250 407 IAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-------G-DNIM 477 (514)
Q Consensus 407 ~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~-------g-~~iR 477 (514)
+++++++.|+++ ..+.+ ...+.++.+.+.+.. ....+.+.|++ +||++.+. + +.||
T Consensus 307 ~~~~l~~~L~~~-g~~~~---~~~~~i~~i~~~~~~-----------~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lR 371 (402)
T TIGR01821 307 NVKRLKNLLEAL-GIPVI---PNPSHIVPVIIGDAA-----------LCKKVSDLLLNKHGIYVQPINYPTVPRGTERLR 371 (402)
T ss_pred HHHHHHHHHHHc-CCCcC---CCCCCEEEEEeCCHH-----------HHHHHHHHHHhcCCEEEEeECCCCCCCCCceEE
Confidence 999999999876 33322 234666666553210 24457788765 59998753 2 4799
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 478 MSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 478 i~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
++|++.+|++||++++++|+++++++
T Consensus 372 is~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 372 ITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999987653
No 92
>PRK09064 5-aminolevulinate synthase; Validated
Probab=100.00 E-value=6.8e-34 Score=295.60 Aligned_cols=334 Identities=20% Similarity=0.240 Sum_probs=247.4
Q ss_pred CCEEEEccCCcccccCCCC-CHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHH
Q 010250 99 GKKYLDSLAGLWCTALGGS-EPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEA 174 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~-~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA 174 (514)
|++++||+|+ ++||++ ||+|++|+.++++++... ++...++.+...+|+++|+++++ .++.++++||++|
T Consensus 45 ~~~~~~~~s~---dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g---~~~~~~~~sG~~a 118 (407)
T PRK09064 45 EREVTVWCSN---DYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG---KEAALVFTSGYVS 118 (407)
T ss_pred CceEEEEECC---CCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC---CCcEEEECcHHHH
Confidence 6999999998 889996 999999999999876442 22333467788999999999873 3678899999999
Q ss_pred HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250 175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254 (514)
Q Consensus 175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
|+.+++++..+ .++.+|+.+..+|++...++..++.+.. .. .+
T Consensus 119 n~~ai~~l~~~-------~~~~~i~~~~~~h~s~~~~~~~~~~~~~------------~~------------------~~ 161 (407)
T PRK09064 119 NDATLSTLAKL-------IPDCVIFSDELNHASMIEGIRRSRCEKH------------IF------------------RH 161 (407)
T ss_pred HHHHHHHHhCC-------CCCCEEEEeCcchHHHHHHHHHcCCcEE------------EE------------------CC
Confidence 99999987522 1246777776678776555544332210 00 01
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-C-cccccccceecccCC-
Q 010250 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-A-FGRLGTMFGCDKYSI- 331 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G-~gr~G~~~~~~~~gv- 331 (514)
++.+++++++....++++++|++|++++++|.+.| +++|+++|++||++||+||+|+ | ||+.|..+ .++.++
T Consensus 162 ~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~----l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~-~~~~~~~ 236 (407)
T PRK09064 162 NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAP----IAEICDLADKYNALTYLDEVHAVGMYGPRGGGI-AERDGLM 236 (407)
T ss_pred CCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccC----HHHHHHHHHHcCCEEEEECCCcccccCCCCCCh-HHhcCCC
Confidence 12578888876543346789999999999999987 9999999999999999999998 6 58887654 456665
Q ss_pred -CCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc-HHHHHHHH
Q 010250 332 -KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN-IVEQVNKI 407 (514)
Q Consensus 332 -~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~-~~~~~~~~ 407 (514)
.+|++ ||||+++.. .|++++++++++.+.... . .+.++.+.+|.++++++++++.+++.+ ..++++++
T Consensus 237 ~~~div~~t~sKa~g~~---GG~~~~~~~~~~~l~~~~---~--~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~ 308 (407)
T PRK09064 237 DRIDIIEGTLAKAFGVM---GGYIAGSAALVDAVRSYA---P--GFIFTTSLPPAIAAAALASIRHLKESNEERERHQER 308 (407)
T ss_pred CCCeEEEEecchhhhcc---CceEecCHHHHHHHHHhC---c--cccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 47888 899999742 267888999988876421 1 122466788999999999999887643 45889999
Q ss_pred HHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee-------C-CEEEE
Q 010250 408 APKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-------G-DNIMM 478 (514)
Q Consensus 408 ~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~-------g-~~iRi 478 (514)
++++++.|+++ ..+++. ..+.++.+.+.+.. ....+.+.|++ +||++.+. + +.||+
T Consensus 309 ~~~l~~~L~~~-g~~~~~---~~~~iv~i~~~~~~-----------~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRi 373 (407)
T PRK09064 309 AAKLKAALDAA-GIPVMP---NESHIVPVMVGDPE-----------KCKKASDMLLEEHGIYVQPINYPTVPRGTERLRI 373 (407)
T ss_pred HHHHHHHHHHc-CCCCCC---CCCCEEEEEeCCHH-----------HHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEE
Confidence 99999999876 333222 23556666553211 24567788875 59999752 2 46999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 479 SPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 479 ~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+|++.+|++|+++++++|+++++++
T Consensus 374 s~~~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 374 TPTPFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred EeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999988654
No 93
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=100.00 E-value=6.7e-33 Score=285.36 Aligned_cols=342 Identities=16% Similarity=0.238 Sum_probs=241.0
Q ss_pred EEccCCcccccCCC-CCHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250 103 LDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ 178 (514)
Q Consensus 103 lD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A 178 (514)
|||.|+ ++||. +||++++++.+++++.+.. ++.+.+....+.+|++++++++. .+..++++||+.|+.++
T Consensus 1 ~~f~s~---dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g---~e~al~~~sG~~a~~~~ 74 (392)
T PLN03227 1 LNFATH---DFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLG---TESAILYSDGASTTSST 74 (392)
T ss_pred CCCcCc---CccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhC---CCcEEEecCcHHHHHHH
Confidence 578777 88998 6999999999999874332 23334456688999999999983 35789999999999988
Q ss_pred HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250 179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258 (514)
Q Consensus 179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (514)
+.... ...+.|++-+ .-|+++..++.+++.... . +.+++.+
T Consensus 75 i~~l~--------~~GD~Vl~~~-~~h~s~~~~~~l~~~~~~------------~------------------~~~~d~~ 115 (392)
T PLN03227 75 VAAFA--------KRGDLLVVDR-GVNEALLVGVSLSRANVR------------W------------------FRHNDMK 115 (392)
T ss_pred HHHhC--------CCCCEEEEec-cccHHHHHHHHHcCCeEE------------E------------------eCCCCHH
Confidence 87653 2334555544 445554443333321100 0 0011123
Q ss_pred HHHHHHHHhC----------CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc--Cccccccccee
Q 010250 259 NLEDLILKEG----------PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC--AFGRLGTMFGC 326 (514)
Q Consensus 259 ~le~li~~~~----------~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t--G~gr~G~~~~~ 326 (514)
++++.+.... ..++..|++||+++++|.++| |++|+++|++||+++|+||+|+ .+|++|. |..
T Consensus 116 ~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~----l~~i~~l~~~~g~~livDe~~~~g~~g~~G~-g~~ 190 (392)
T PLN03227 116 DLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAP----LKELVALKEEFHYRLILDESFSFGTLGKSGR-GSL 190 (392)
T ss_pred HHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccC----HHHHHHHHHHcCCEEEEECcccccccCCCCC-cHH
Confidence 4444332211 135689999999999999988 9999999999999999999997 3345554 678
Q ss_pred cccCCCC----chhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCc--HHHHHHHHHHHHH-Hhh
Q 010250 327 DKYSIKP----DLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH--PVSCAVAIEALKI-YKE 397 (514)
Q Consensus 327 ~~~gv~p----Div~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~--pl~~aaa~aal~~-~~~ 397 (514)
+++|+.| |++++| |+++ ...|++++++++++.+.. ..+++||+++ |+.++++.++++. +++
T Consensus 191 ~~~g~~p~~~~Div~~slsk~~g---~~gg~v~~~~~~~~~~~~-------~~~~~~~~~~~~p~~~~aa~~al~~~~~~ 260 (392)
T PLN03227 191 EHAGLKPMVHAEIVTFSLENAFG---SVGGMTVGSEEVVDHQRL-------SGSGYCFSASAPPFLAKADATATAGELAG 260 (392)
T ss_pred HHcCCCCCCCceEEEeechhhhh---ccCcEEecCHHHHHHHHH-------hCcCccccCCCCHHHHHHHHHHHHHHhcC
Confidence 9999999 998766 5443 345667789998887752 2456788776 8888888877754 455
Q ss_pred ccHHHHHHHHHHHHHhhhhhccCCCceeEEEee--------eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEE
Q 010250 398 RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT--------GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV 469 (514)
Q Consensus 398 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~--------g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~ 469 (514)
+++.+++++++++|+++|++ .+++.+.++||. |+++++++.+..... +. ........+.+.|+++|+++
T Consensus 261 ~~~~~~l~~~~~~l~~~L~~-~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~-~~-~~~~~~~~~~~~~~~~Gi~~ 337 (392)
T PLN03227 261 PQLLNRLHDSIANLYSTLTN-SSHPYALKLRNRLVITSDPISPIIYLRLSDQEATR-RT-DETLILDQIAHHSLSEGVAV 337 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCccccccccccccCCCCCCCEEEEEeCCHHHhh-hh-hhhhHHHHHHHHHHHCCCEE
Confidence 67899999999999999987 356777777763 557889886532211 01 11113457889999999998
Q ss_pred EeeC------------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010250 470 RVSG------------DNIMMSPPFIMSPEEVDELISKYGKALKATEERV 507 (514)
Q Consensus 470 ~~~g------------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~ 507 (514)
.+.+ ..||++....+|+||||+++++|+++++++.-++
T Consensus 338 ~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~~~~~ 387 (392)
T PLN03227 338 VSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAILCKI 387 (392)
T ss_pred EecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 6422 2467777778899999999999999998875443
No 94
>PLN02955 8-amino-7-oxononanoate synthase
Probab=100.00 E-value=4.3e-32 Score=278.26 Aligned_cols=338 Identities=18% Similarity=0.144 Sum_probs=253.1
Q ss_pred CCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHH
Q 010250 99 GKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEA 174 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA 174 (514)
++++|||.|+ ++||. +||+|++++.+++++++.. ++...++++.+.+|+++|++++ +.+.+++++||+.|
T Consensus 101 ~r~~l~FsSn---dYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~---g~e~all~sSGy~A 174 (476)
T PLN02955 101 FKKLLLFSGN---DYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK---KKEDCLVCPTGFAA 174 (476)
T ss_pred CceEEEeecc---CccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH---CCCcEEEECChHHH
Confidence 5799999998 88998 6999999999999886543 4466778889999999999998 56789999999999
Q ss_pred HHHHHHHHHHHHhh---cC--CCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCCh
Q 010250 175 NDTQVKLVWYYNNA---LG--RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETE 249 (514)
Q Consensus 175 ~~~Alk~a~~~~~~---~~--~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (514)
|.+++......... .. ..+++.+|+.+...|.+...++.++....- . . +
T Consensus 175 N~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~---a----~-~------------------ 228 (476)
T PLN02955 175 NMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGN---V----E-V------------------ 228 (476)
T ss_pred HHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCC---c----e-E------------------
Confidence 99999765210000 00 024567889999999998777765532100 0 0 0
Q ss_pred hHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc--cceec
Q 010250 250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--MFGCD 327 (514)
Q Consensus 250 ~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~--~~~~~ 327 (514)
..|.|+|+++|++++++.. ++.+.|++|+++++.|++.| |++|+++|++||++||+||+|+ +|+.|+ .+..+
T Consensus 229 ~~f~HND~~~Le~~L~~~~-~~~~~Vv~EgV~SmdGdiap----L~eL~~L~~~~ga~LiVDEAH~-~Gv~G~~G~G~~e 302 (476)
T PLN02955 229 FVYRHCDMYHLNSLLSSCK-MKRKVVVTDSLFSMDGDFAP----MEELSQLRKKYGFLLVIDDAHG-TFVCGENGGGVAE 302 (476)
T ss_pred EEeCCCCHHHHHHHHHhCC-CCceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCcEEEEccccc-CceecCCCCcHHH
Confidence 0144667899999987654 35678999999999999998 9999999999999999999997 667776 55678
Q ss_pred ccCCCCch----hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc-cHHH
Q 010250 328 KYSIKPDL----VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER-NIVE 402 (514)
Q Consensus 328 ~~gv~pDi----v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~-~~~~ 402 (514)
++|+.+|+ .||||++|. ..|++++++++++.+.... +.+ .++.+.+|..+++++++++++..+ ...+
T Consensus 303 ~~g~~~di~ii~~TLsKA~G~---~GGfi~gs~~~~~~l~~~~---~~~--ifStalpp~~aaa~laal~l~~~~~~~r~ 374 (476)
T PLN02955 303 EFNCEADVDLCVGTLSKAAGC---HGGFIACSKKWKQLIQSRG---RSF--IFSTAIPVPMAAAAYAAVVVARKEKWRRK 374 (476)
T ss_pred HhCCCCCCcEEEEeCccchhc---cCceeecHHHHHHHHHHhC---CCC--eecccccHHHHHHHHHHHHHHhcCHHHHH
Confidence 89988776 589999983 2356889999999987532 122 233355667778888999988543 4667
Q ss_pred HHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------C-C
Q 010250 403 QVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------G-D 474 (514)
Q Consensus 403 ~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------g-~ 474 (514)
+++++.++|++.+ .+ +. ...++.+.+.++. .+..+.++|+++|+++.+. + .
T Consensus 375 ~L~~n~~~fr~~~-G~---~~------~sPI~pI~ig~~~-----------~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~ 433 (476)
T PLN02955 375 AIWERVKEFKALS-GV---DI------SSPIISLVVGNQE-----------KALKASRYLLKSGFHVMAIRPPTVPPNSC 433 (476)
T ss_pred HHHHHHHHHHHhc-CC---CC------CCCEEEEEeCCHH-----------HHHHHHHHHHHCCCEEEEECCCCCCCCCc
Confidence 8888888888732 22 21 2456666665432 3556889999999998732 3 3
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 475 NIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 475 ~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
.+||+....+|++||++++++|.++.+.+
T Consensus 434 rLRi~lsA~Ht~edId~lv~~L~~~~~~~ 462 (476)
T PLN02955 434 RLRVTLSAAHTTEDVKKLITALSSCLDFD 462 (476)
T ss_pred eEEEeeCCCCCHHHHHHHHHHHHHHHhhh
Confidence 59999999999999999999998886544
No 95
>PRK07179 hypothetical protein; Provisional
Probab=100.00 E-value=2.3e-31 Score=276.56 Aligned_cols=337 Identities=16% Similarity=0.218 Sum_probs=240.6
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc---cccccccCCchHHHHHHHHHHhcC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF---YHSFWNRTTKPSLDLAKELLEMFT 158 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~---~~~~~~~~~~~~~ela~~L~~~~~ 158 (514)
.+++..+++|.+++|.+||.||||. +||+|++++.+++++... .++.+....+...+|+++|++++
T Consensus 44 ~~~~~~~~~g~~~~~~~~~~YL~l~----------~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~- 112 (407)
T PRK07179 44 KHLVLGKTPGPDAIILQSNDYLNLS----------GHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT- 112 (407)
T ss_pred ceEEeecCCCCcEEEeecCCccCCC----------CCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh-
Confidence 7889999999999999999999986 689999999999987522 12333333457789999999997
Q ss_pred cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC
Q 010250 159 ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH 238 (514)
Q Consensus 159 ~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 238 (514)
+.++++|++||++||+.+++.+. ..++.|++ +...|.+........+... .+
T Consensus 113 --g~~~~~~~~sG~~An~~~l~~l~--------~~g~~v~~-~~~~h~s~~~~~~~~g~~~--------------~~--- 164 (407)
T PRK07179 113 --GFESCLLCQSGWAANVGLLQTIA--------DPNTPVYI-DFFAHMSLWEGVRAAGAQA--------------HP--- 164 (407)
T ss_pred --CCCcEEEECCHHHHHHHHHHHhC--------CCCCEEEE-ECCcCHHHHHHHHHCCCeE--------------EE---
Confidence 34678999999999999998763 12234444 5555544322222112110 00
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc
Q 010250 239 YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 318 (514)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g 318 (514)
+.++++++|++++.+ .++++|++|++++++|.+.| +++|+++|++||++||+||+|+ +|
T Consensus 165 -------------~~~~d~~~l~~~l~~---~~~~lV~v~~v~n~tG~i~p----l~~I~~l~~~~~~~livDea~~-~g 223 (407)
T PRK07179 165 -------------FRHNDVDHLRRQIER---HGPGIIVVDSVYSTTGTIAP----LADIVDIAEEFGCVLVVDESHS-LG 223 (407)
T ss_pred -------------ecCCCHHHHHHHHHh---cCCeEEEECCCCCCCCcccc----HHHHHHHHHHcCCEEEEECccc-cc
Confidence 111235778887753 24678999999999999988 9999999999999999999998 44
Q ss_pred c---ccccceecccCCC--Cchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHH
Q 010250 319 R---LGTMFGCDKYSIK--PDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEA 391 (514)
Q Consensus 319 r---~G~~~~~~~~gv~--pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aa 391 (514)
+ +|.. .+..+++. +|++ +++|++++ ++|++++++++++.+..... +..+++|+. +..++++.++
T Consensus 224 ~~g~~g~g-~~~~~~~~~~vdi~~~S~sK~~g~---~~G~l~~~~~~~~~~~~~~~---~~~~~~t~~--~~~~aa~~aa 294 (407)
T PRK07179 224 THGPQGAG-LVAELGLTSRVHFITASLAKAFAG---RAGIITCPRELAEYVPFVSY---PAIFSSTLL--PHEIAGLEAT 294 (407)
T ss_pred CcCCCCCc-hHHhcCCCCCCCEEEeechHhhhc---cCeEEEeCHHHHHHHHHhCc---CeeeCCCCC--HHHHHHHHHH
Confidence 4 4433 24556664 4775 47899974 58999999998887753211 112334443 5555666777
Q ss_pred HHHHhhc-cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE
Q 010250 392 LKIYKER-NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR 470 (514)
Q Consensus 392 l~~~~~~-~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~ 470 (514)
++.+++. +..++++++++++++.|+++ ... +.+.+.++.+.+.... ....+.+.|.++||++.
T Consensus 295 l~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~----v~~~~~i~~l~~~~~~-----------~~~~~~~~L~~~GI~~~ 358 (407)
T PRK07179 295 LEVIESADDRRARLHANARFLREGLSEL-GYN----IRSESQIIALETGSER-----------NTEVLRDALEERNVFGA 358 (407)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCC----CCCCCCEEEEEeCCHH-----------HHHHHHHHHHHCCceEe
Confidence 8877654 47889999999999999886 322 2345778887764311 13457788999999743
Q ss_pred ----ee----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 471 ----VS----GDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 471 ----~~----g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+. .+.|||+++..+|++||++++++|++++++.
T Consensus 359 ~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 359 VFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred eecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 22 2579999999999999999999999887753
No 96
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=100.00 E-value=6e-31 Score=271.58 Aligned_cols=347 Identities=16% Similarity=0.225 Sum_probs=243.5
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhc
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMF 157 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~ 157 (514)
.|.++++++|++|| .||++||||.++ .++|| ++|.+++++.+++++.... +..+.+..+...++++++++.+
T Consensus 16 ~~~~~~~~~g~~~~-~~g~~~id~~~~---~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~ 91 (385)
T TIGR01825 16 SIRVLESAQGPRVR-VNGKEVINLSSN---NYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFK 91 (385)
T ss_pred cccccccCCCceEE-ECCceEEEeecc---CccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHh
Confidence 57889999999999 999999999876 66899 8999999999998764321 2233456678889999999886
Q ss_pred CcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC
Q 010250 158 TASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP 237 (514)
Q Consensus 158 ~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 237 (514)
+ .+..++.+||++|+..+++.++ .+++.|+ .+..+|+....++...+.+... ++
T Consensus 92 g---~~~~i~~~sG~~a~~~a~~~~~--------~~gd~vi-~~~~~~~~~~~~~~~~g~~~~~------------~~-- 145 (385)
T TIGR01825 92 K---TEAALVFQSGFNTNQGVLSALL--------RKGDIVL-SDELNHASIIDGLRLTKATKKI------------YK-- 145 (385)
T ss_pred C---CCcEEEECcHHHHHHHHHHHhC--------CCCCEEE-EEccccHHHHHHHHhcCCceEE------------eC--
Confidence 4 2456778889999998888663 2234444 5556677654443333321110 00
Q ss_pred CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC-
Q 010250 238 HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA- 316 (514)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG- 316 (514)
+.+.+++++.+.+....++++|+++++++.+|.+.+ +++|.++|++||+++|+||+|+.
T Consensus 146 ----------------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~----~~~i~~l~~~~~~~li~De~~~~~ 205 (385)
T TIGR01825 146 ----------------HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAP----LPEIVELAERYGAVTYVDDAHGSG 205 (385)
T ss_pred ----------------CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccC----HHHHHHHHHHhCCEEEEECccccc
Confidence 011466777665443346789999999999998877 89999999999999999999963
Q ss_pred -cccccccceecccCCCCch----hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHH
Q 010250 317 -FGRLGTMFGCDKYSIKPDL----VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEA 391 (514)
Q Consensus 317 -~gr~G~~~~~~~~gv~pDi----v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aa 391 (514)
+++.|. +...++++.+|. .+|||++++ +.|++++++++++.+..... .+ ..+...+|..++++.++
T Consensus 206 ~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~---~gG~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~a~~~a 276 (385)
T TIGR01825 206 VMGEAGR-GTVHHFGLEDKVDIQVGTLSKAIGV---VGGYAAGHKELIEYLKNRAR---PF--LFSTAQPPAVVAALAAA 276 (385)
T ss_pred CcCCCCC-ccHhhcCCCcCCcEEEEeccHHhhc---CCCEEecCHHHHHHHHHhCc---cc--cccCCCCHHHHHHHHHH
Confidence 344443 233445555553 589999964 44788889999888864210 11 11223567888888899
Q ss_pred HHHHhh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE
Q 010250 392 LKIYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR 470 (514)
Q Consensus 392 l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~ 470 (514)
++.+.+ .+..+++.++++++.+.|+++ ..+.. ...+.++.+.+.... ....+++.|+++||++.
T Consensus 277 l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~---~~~~~~~~~~~~~~~-----------~~~~~~~~L~~~gi~v~ 341 (385)
T TIGR01825 277 VDELQRSPELMERLWDNTRFFKAGLGKL-GYDTG---GSETPITPVVIGDEK-----------AAQEFSRRLFDEGIFAQ 341 (385)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCC---CCCCCEEEEEECCHH-----------HHHHHHHHHHHCCcEEc
Confidence 987654 357888899999999999876 22222 122334454442110 13458889999999885
Q ss_pred e-------eC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 471 V-------SG-DNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 471 ~-------~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
. .+ ..||++|++.+++++|++++++|++++++
T Consensus 342 ~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 342 SIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred ccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 2 12 46999999999999999999999998754
No 97
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.98 E-value=1.5e-30 Score=268.48 Aligned_cols=341 Identities=21% Similarity=0.270 Sum_probs=243.1
Q ss_pred EEEeeeCcEEEeCCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCccc---cccccCCchHHHHHHHHHHhcCcC
Q 010250 85 VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFYH---SFWNRTTKPSLDLAKELLEMFTAS 160 (514)
Q Consensus 85 ~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~~---~~~~~~~~~~~ela~~L~~~~~~~ 160 (514)
++++++|+++|+ +|++||||.++ .++|| ++|+|++++.++++...... ....++.+...++++++++++.
T Consensus 25 ~~~~~~g~~~~~-~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-- 98 (385)
T PRK05958 25 PREGGAGRWLVV-DGRRMLNFASN---DYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG-- 98 (385)
T ss_pred ccccCCCceeEe-CCceEEEeeCC---CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC--
Confidence 589999999997 99999999987 56898 78999999999997643211 1222355677899999999874
Q ss_pred CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcc
Q 010250 161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW 240 (514)
Q Consensus 161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
.++++++++|++++..+++... .+++.|+ +...+|+....+..+.+.+.. .++.+
T Consensus 99 -~~~~i~~~~g~~~~~~~l~~~~--------~~gd~V~-~~~~~~~~~~~~~~~~g~~~~------------~~~~~--- 153 (385)
T PRK05958 99 -AERALLFSSGYAANLAVLTALA--------GKGDLIV-SDKLNHASLIDGARLSRARVR------------RYPHN--- 153 (385)
T ss_pred -CCcEEEECcHHHHHHHHHHHhC--------CCCCEEE-EeCccCHHHHHHHHhcCCceE------------EeCCC---
Confidence 3577888899999998876542 2234455 455677766554444332211 01110
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-C-cc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-A-FG 318 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G-~g 318 (514)
+.+++++++... ++++++++++++++.+|.+.+ +++|.++|++||+++|+||+|+ | ++
T Consensus 154 ---------------d~~~l~~~i~~~-~~~~~lvi~~~~~~~~G~~~~----l~~i~~ia~~~~~~li~De~~~~g~~~ 213 (385)
T PRK05958 154 ---------------DVDALEALLAKW-RAGRALIVTESVFSMDGDLAP----LAELVALARRHGAWLLVDEAHGTGVLG 213 (385)
T ss_pred ---------------CHHHHHHHHHhc-cCCCeEEEEEecccCCCCcCC----HHHHHHHHHHhCCEEEEECcccccccC
Confidence 146778777542 224789999999999998766 9999999999999999999996 3 34
Q ss_pred cccccceecccC--CCCc---hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHH
Q 010250 319 RLGTMFGCDKYS--IKPD---LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALK 393 (514)
Q Consensus 319 r~G~~~~~~~~g--v~pD---iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~ 393 (514)
+.|..+ ....+ ..+| +.++||+++. +.|++++++++++.+.... . .+..+.+.+|++++++.++|+
T Consensus 214 ~~g~~~-~~~~~~~~~~~~i~~~s~sK~~~~---~Gg~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~aa~~aal~ 284 (385)
T PRK05958 214 PQGRGL-AAEAGLAGEPDVILVGTLGKALGS---SGAAVLGSETLIDYLINRA---R--PFIFTTALPPAQAAAARAALR 284 (385)
T ss_pred CCCCch-HHhhCCCCCCceEEEEechhhccc---CCcEEEcCHHHHHHHHHhC---c--cceecCCCCHHHHHHHHHHHH
Confidence 444332 22222 3456 4578999964 3378888999888775321 1 123345678889988999999
Q ss_pred HHhhc-cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee
Q 010250 394 IYKER-NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS 472 (514)
Q Consensus 394 ~~~~~-~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~ 472 (514)
.+++. ++.+++.++++++.+.|+++ ...+ +.+.|.++.+.+.+.. ....+.+.|.++||.+.+.
T Consensus 285 ~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~---~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~gI~v~~~ 349 (385)
T PRK05958 285 ILRREPERRERLAALIARLRAGLRAL-GFQL---MDSQSAIQPLIVGDNE-----------RALALAAALQEQGFWVGAI 349 (385)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHc-CCCc---CCCCCCEEEEEeCCHH-----------HHHHHHHHHHHCCceEecc
Confidence 87653 67889999999999999876 2222 2346777777764211 2456888999999999752
Q ss_pred --------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 473 --------GDNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 473 --------g~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
.+.+|++|+..++++|+++++++|++++
T Consensus 350 ~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 350 RPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred cCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 2479999999999999999999998753
No 98
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.97 E-value=5.4e-30 Score=237.15 Aligned_cols=343 Identities=19% Similarity=0.270 Sum_probs=256.3
Q ss_pred CeEEEeeeCcEEEeCCC--CEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCc---cccccccCCchHHHHHHHHHHh
Q 010250 83 PLVIEKSEGSYVYDVNG--KKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPF---YHSFWNRTTKPSLDLAKELLEM 156 (514)
Q Consensus 83 p~~~~~~~G~~~~d~dG--~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~---~~~~~~~~~~~~~ela~~L~~~ 156 (514)
..++++.+|..+. ++| +++|+|+++ ++||. +||+|.+|..++++.++. +.+|..++.+.+..|+.+|+++
T Consensus 49 erVi~s~q~p~i~-v~G~~k~ilnFcaN---nYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqf 124 (417)
T KOG1359|consen 49 ERVITSRQGPTIQ-VKGSDKKILNFCAN---NYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQF 124 (417)
T ss_pred eeEEeecccceEE-Eeccccceeeeccc---ccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHH
Confidence 3578888998877 677 699999998 89998 699999999999988543 3457778899999999999998
Q ss_pred cCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC
Q 010250 157 FTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC 236 (514)
Q Consensus 157 ~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 236 (514)
. +.+..++++|+..||..++.... + .++-|+.+.-.|.+.+.++.+.
T Consensus 125 h---~rED~ilypscfdANag~feail--------~-pedAvfSDeLNhASIIdGirLc--------------------- 171 (417)
T KOG1359|consen 125 H---GREDTILYPSCFDANAGAFEAIL--------T-PEDAVFSDELNHASIIDGIRLC--------------------- 171 (417)
T ss_pred h---CCCceEEeccccccchHHHHHhc--------C-hhhhhhccccccchhhhhhHHH---------------------
Confidence 6 56789999999999999987763 2 2344555666777665544332
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-
Q 010250 237 PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC- 315 (514)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t- 315 (514)
+.+.|.++-+++..+.+..+.+...|+.+.+.++.|++.| |++|.+|++|||.||++||.|.
T Consensus 172 -------------kry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaP----l~ei~~La~kYgaLlfiDecHaT 234 (417)
T KOG1359|consen 172 -------------KRYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAP----LEEISQLAKKYGALLFIDECHAT 234 (417)
T ss_pred -------------hhhccchhHHHHHHHHHhhhheEEEEEecceeccCCCccc----HHHHHHHHHhcCcEEEEeecccc
Confidence 1244555677776666544567899999999999999999 9999999999999999999987
Q ss_pred Cc-ccccccceecccCCC--Cchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHH
Q 010250 316 AF-GRLGTMFGCDKYSIK--PDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIE 390 (514)
Q Consensus 316 G~-gr~G~~~~~~~~gv~--pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~a 390 (514)
|| |.+| .+.-+.+|+. +|++ |+||++|| ..-|++.+++.+++.+++++ +++.. +.+..|.....+.+
T Consensus 235 gf~G~tG-rGt~E~~~vm~~vdiinsTLgKAlGg--a~GGyttgp~~li~llrqr~---RpylF--SnslppavV~~a~k 306 (417)
T KOG1359|consen 235 GFFGETG-RGTAEEFGVMGDVDIINSTLGKALGG--ASGGYTTGPKPLISLLRQRS---RPYLF--SNSLPPAVVGMAAK 306 (417)
T ss_pred eeecCCC-CChHHHhCCCCcceehhhhhhhhhcC--CCCCCccCChhHHHHHHhcC---Cceee--cCCCChhhhhhhHH
Confidence 44 5555 3455778864 6766 79999997 34578889999999998754 33333 33444555556667
Q ss_pred HHHHH-hhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEE
Q 010250 391 ALKIY-KERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV 469 (514)
Q Consensus 391 al~~~-~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~ 469 (514)
+++.+ ....+..+.+.+.++|++.++.. ...+.+ ...++..+.+.+. .++..++.+|+++|+++
T Consensus 307 a~dllm~s~~~i~~~~a~~qrfr~~me~a-GftIsg---~~hPI~pv~lGda-----------~lA~~~ad~lLk~Gi~V 371 (417)
T KOG1359|consen 307 AYDLLMVSSKEIQSRQANTQRFREFMEAA-GFTISG---ASHPICPVMLGDA-----------RLASKMADELLKRGIYV 371 (417)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHhc-CceecC---CCCCccceecccH-----------HHHHHHHHHHHhcCceE
Confidence 77754 44567888999999999988753 111110 0113344444332 35777899999999998
Q ss_pred E-------eeCC-EEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 470 R-------VSGD-NIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 470 ~-------~~g~-~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
. |.|. .||+..+..+|+||||++++++.++.+.
T Consensus 372 igfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~ 412 (417)
T KOG1359|consen 372 IGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRF 412 (417)
T ss_pred EeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHh
Confidence 6 3344 4999999999999999999999888753
No 99
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=1.5e-29 Score=263.09 Aligned_cols=335 Identities=19% Similarity=0.245 Sum_probs=236.3
Q ss_pred CCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250 98 NGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE 173 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse 173 (514)
+|+++++|.|+ ++||. +||+|++|+.++++++... ++.+.+..+.+.+|+++|+++++ .+..++++||++
T Consensus 44 ~~~~~~~~~sn---~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g---~~~~i~~~sG~~ 117 (410)
T PRK13392 44 GPRRVTIWCSN---DYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHG---KESALLFTSGYV 117 (410)
T ss_pred CCceEEEEECC---CccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhC---CCCEEEECcHHH
Confidence 57899999997 67777 6999999999999876432 12223345568899999999984 356888889999
Q ss_pred HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHH
Q 010250 174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS 253 (514)
Q Consensus 174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (514)
|++.+++.... ..+ ..+|+.+..+|++...++..+|..... + +
T Consensus 118 a~~~~i~~l~~-----~~~--g~~vi~~~~~h~s~~~~~~~~g~~~~~------------~--~---------------- 160 (410)
T PRK13392 118 SNDAALSTLGK-----LLP--GCVILSDALNHASMIEGIRRSGAEKQV------------F--R---------------- 160 (410)
T ss_pred HHHHHHHHHhc-----CCC--CCEEEEehhhhHHHHHHHHHcCCeEEE------------E--e----------------
Confidence 99999985421 112 246666777898875555444432110 0 0
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-Cc-ccccccceecccCC
Q 010250 254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AF-GRLGTMFGCDKYSI 331 (514)
Q Consensus 254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~-gr~G~~~~~~~~gv 331 (514)
+++.+++++.+.+...+++++|++|++++++|.+.+ +++|.++|++||+++|+||+|+ |+ |+.|... .++.++
T Consensus 161 ~~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~-~~~~~~ 235 (410)
T PRK13392 161 HNDLADLEEQLASVDPDRPKLIAFESVYSMDGDIAP----IEAICDLADRYNALTYVDEVHAVGLYGARGGGI-AERDGL 235 (410)
T ss_pred CCCHHHHHHHHHhccCCCCEEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEECCccccCcCCCCCch-hhhccC
Confidence 001345666665443356789999999999999987 9999999999999999999998 44 5555433 344454
Q ss_pred --CCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc-cHHHHHHH
Q 010250 332 --KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER-NIVEQVNK 406 (514)
Q Consensus 332 --~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~-~~~~~~~~ 406 (514)
.+|++ +|||+++.. .|++++++++++.+..... ...++.+.+|++++++.++|+.+++. ...+++++
T Consensus 236 ~~~~div~~tlsK~~g~~---GG~~~~~~~~~~~l~~~~~-----~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~ 307 (410)
T PRK13392 236 MDRIDMIQGTLAKAFGCL---GGYIAASADLIDFVRSFAP-----GFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQD 307 (410)
T ss_pred CCCCcEEEEEChHhhhcc---cchhhcCHHHHHHHHHhCc-----chhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 46776 899998752 2677889999887764211 11235566788899999999977643 34567888
Q ss_pred HHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------C-CEEE
Q 010250 407 IAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------G-DNIM 477 (514)
Q Consensus 407 ~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g-~~iR 477 (514)
+.+++++.|+++ ..+.. .+.+.++.+.+.+.. ....+.+.|+ ++||++.+. + ..||
T Consensus 308 ~~~~l~~~L~~~-g~~~~---~~~~~~~~i~~~~~~-----------~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lR 372 (410)
T PRK13392 308 RVAALKAKLNAN-GIPVM---PSPSHIVPVMVGDPT-----------LCKAISDRLMSEHGIYIQPINYPTVPRGTERLR 372 (410)
T ss_pred HHHHHHHHHHHc-CCCCC---CCCCCEEEEEeCCHH-----------HHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEE
Confidence 889999999875 22221 234555555443210 1346778886 689999853 2 4699
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 478 MSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 478 i~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+++++.+|++|+++++++|+++++++
T Consensus 373 is~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 373 ITPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999887654
No 100
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.97 E-value=7.9e-29 Score=256.51 Aligned_cols=349 Identities=19% Similarity=0.264 Sum_probs=243.1
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCC-CHHHHHHHHHHHhcCCc-c--ccccccCCchHHHHHHHHHHhc
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGS-EPRLVAAATAQLNTLPF-Y--HSFWNRTTKPSLDLAKELLEMF 157 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~-~p~v~~A~~~~l~~~~~-~--~~~~~~~~~~~~ela~~L~~~~ 157 (514)
.|..+.++.|.++++.+|++||||.++ .+||++ +|++++++.+++.+... + +.+..+..+...++++.|++++
T Consensus 20 ~~~~~~~~~~~~~~~~~g~~~i~~~~~---~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~ 96 (393)
T TIGR01822 20 SERIITSPQGADIRVADGREVLNFCAN---NYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFL 96 (393)
T ss_pred cccccccCCCceEEecCCceEEEeeCC---CccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh
Confidence 456788899999999999999999999 789996 99999999999976322 1 2233344667789999999998
Q ss_pred CcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC
Q 010250 158 TASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP 237 (514)
Q Consensus 158 ~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 237 (514)
+ .+.+++++||++|+..++.... .+.+.|++.+..|+... ..+.+.+.....
T Consensus 97 g---~~~~ii~~~~~~a~~~~~~~l~--------~~gd~vi~~~~~~~s~~-~~~~~~~~~~~~---------------- 148 (393)
T TIGR01822 97 G---TEDTILYASCFDANGGLFETLL--------GAEDAIISDALNHASII-DGVRLCKAKRYR---------------- 148 (393)
T ss_pred C---CCcEEEECchHHHHHHHHHHhC--------CCCCEEEEeccccHHHH-HHHHhcCCceEE----------------
Confidence 4 3567888999999998776542 23456777666555433 222222211100
Q ss_pred CcccCCCCCCChhHHHHHHHHHHHHHHHHhCC--CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc
Q 010250 238 HYWRYAHPGETEEEYSTRLANNLEDLILKEGP--ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 315 (514)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~--~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t 315 (514)
+.+++.+++++.+.+... .++.+|+++++++++|.+.| +++|.++|++||++||+||+|.
T Consensus 149 --------------~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~----l~~i~~la~~~~~~li~De~~~ 210 (393)
T TIGR01822 149 --------------YANNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP----LDEICDLADKYDALVMVDECHA 210 (393)
T ss_pred --------------eCCCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC----HHHHHHHHHHcCCEEEEECCcc
Confidence 001225777777764321 26789999999999999877 9999999999999999999995
Q ss_pred Cccccccc--ceecccCC--CCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHH
Q 010250 316 AFGRLGTM--FGCDKYSI--KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAI 389 (514)
Q Consensus 316 G~gr~G~~--~~~~~~gv--~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~ 389 (514)
+|..|.. +..+..++ .+|++ +++|+|+| +++|++++++++++.+.... ..+. .+.+.++..++++.
T Consensus 211 -~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g--~r~G~~~~~~~~~~~l~~~~---~~~~--~~~~~~~~~~~a~~ 282 (393)
T TIGR01822 211 -TGFLGPTGRGSHELCGVMGRVDIITGTLGKALGG--ASGGFTTARKEVVELLRQRS---RPYL--FSNSLPPAVVGASI 282 (393)
T ss_pred -ccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhC--CCcEEEEeCHHHHHHHHHhC---ccce--ecCCCCHHHHHHHH
Confidence 4443321 12233444 35666 68999986 68999999999998886421 1111 12233566677788
Q ss_pred HHHHHHhh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcE
Q 010250 390 EALKIYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGML 468 (514)
Q Consensus 390 aal~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~ 468 (514)
++++.+++ ++..++++++.+++++.|+++ ...+. .+.+.++.+.+.+.. ....+...|.++||+
T Consensus 283 ~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~---~~~~~~~~i~~~~~~-----------~~~~l~~~L~~~gI~ 347 (393)
T TIGR01822 283 KVLEMLEASNELRDRLWANTRYFRERMEAA-GFDIK---PADHPIIPVMLYDAV-----------LAQRFARRLLEEGIY 347 (393)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCC---CCCCCEEEEEeCCHH-----------HHHHHHHHHHHCCee
Confidence 88887754 457889999999999999875 22221 123445555443211 245688889999998
Q ss_pred EEee-------C-CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 469 VRVS-------G-DNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 469 ~~~~-------g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
+... + ..||+++++.+|++||++++++|++++++
T Consensus 348 v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~ 389 (393)
T TIGR01822 348 VTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGRE 389 (393)
T ss_pred EeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 8631 2 35999999999999999999999988754
No 101
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.97 E-value=3.3e-28 Score=252.09 Aligned_cols=348 Identities=20% Similarity=0.263 Sum_probs=240.1
Q ss_pred eEEEeeeCcEEEeCCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCccc---cccccCCchHHHHHHHHHHhcCc
Q 010250 84 LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFYH---SFWNRTTKPSLDLAKELLEMFTA 159 (514)
Q Consensus 84 ~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~~---~~~~~~~~~~~ela~~L~~~~~~ 159 (514)
..+++++|.++||.+|+.||||.++ .++|| .+|++.+++.+++++..+.+ .+..+..+...++++.++++++
T Consensus 26 ~~~~~~~~~~~~~~~g~~~i~l~~~---~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g- 101 (397)
T PRK06939 26 RVITSPQGADITVADGKEVINFCAN---NYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLG- 101 (397)
T ss_pred ccccCCCCceEEecCCCeEEEeecc---CccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhC-
Confidence 4578999999999999999999886 66898 69999999999987643221 2233456777889999999874
Q ss_pred CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250 160 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 239 (514)
Q Consensus 160 ~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 239 (514)
.++.+++++|++|+..+++... ..++.||+.++.|.+...... ..+.... .++.
T Consensus 102 --~~~~i~~tsG~~a~~~~~~~l~--------~~gd~vi~~~~~~~~~~~~~~-~~~~~~~------------~~~~--- 155 (397)
T PRK06939 102 --TEDAILYSSCFDANGGLFETLL--------GKEDAIISDALNHASIIDGVR-LCKAKRY------------RYAN--- 155 (397)
T ss_pred --CCcEEEEcChHHHHHHHHHHhC--------CCCCEEEEEhhhhHHHHHHHH-hcCCceE------------EeCC---
Confidence 2345666668999999887653 334678888777765432221 1111110 0000
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHHhC--CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-C
Q 010250 240 WRYAHPGETEEEYSTRLANNLEDLILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-A 316 (514)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~--~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G 316 (514)
.+.+++++.+.... ..++++|+++++++..|.+.+ +++|.++|++||+++|+||+|+ |
T Consensus 156 ---------------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~----~~~l~~la~~~~~~li~De~~~~g 216 (397)
T PRK06939 156 ---------------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP----LPEICDLADKYDALVMVDDSHAVG 216 (397)
T ss_pred ---------------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC----HHHHHHHHHHhCCEEEEECccccc
Confidence 11467777765421 126788999999999898655 9999999999999999999995 4
Q ss_pred c-ccccccceecccCC--CCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHH
Q 010250 317 F-GRLGTMFGCDKYSI--KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEA 391 (514)
Q Consensus 317 ~-gr~G~~~~~~~~gv--~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aa 391 (514)
+ ++.|. +....+++ .+|++ ++||+++| +++|++++++++++.+.... ..+. .+.+.++..++++.++
T Consensus 217 ~~~~~~~-~~~~~~~~~~~~~i~~~S~sK~~~g--~r~G~v~~~~~~~~~l~~~~---~~~~--~~~~~~~~~~~a~~~a 288 (397)
T PRK06939 217 FVGENGR-GTVEHFGVMDRVDIITGTLGKALGG--ASGGYTAGRKEVIDWLRQRS---RPYL--FSNSLAPAIVAASIKV 288 (397)
T ss_pred CcCCCCC-CHHHHcCCCCCCcEEEEECHHHhCc--cCceEEEeCHHHHHHHHHhC---cccc--ccCCCCHHHHHHHHHH
Confidence 3 33332 12334455 35677 78999965 58899999999998886421 1111 1223456667778888
Q ss_pred HHHHhh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE
Q 010250 392 LKIYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR 470 (514)
Q Consensus 392 l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~ 470 (514)
++.+.+ +++.++++++.+++++.|+++ .... ..+.+.++.+.+.... ....+.+.|.++||.+.
T Consensus 289 l~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~---~~~~~~~~~~~~~~~~-----------~~~~~~~~L~~~gI~v~ 353 (397)
T PRK06939 289 LELLEESDELRDRLWENARYFREGMTAA-GFTL---GPGEHPIIPVMLGDAK-----------LAQEFADRLLEEGVYVI 353 (397)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCc---CCCCCCEEEEEECCHH-----------HHHHHHHHHHHCCceEe
Confidence 887754 357788999999999999875 2221 1234555544442210 14568889999999887
Q ss_pred ee--------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 471 VS--------GDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 471 ~~--------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+. ...||+++++.+++++|++++++|+++++++
T Consensus 354 ~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 354 GFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 42 1469999988999999999999999887653
No 102
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.96 E-value=6e-28 Score=247.56 Aligned_cols=328 Identities=20% Similarity=0.194 Sum_probs=228.8
Q ss_pred CEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCC-------c---cccccccCCchHHHHHHHHHHhcCcCCCCeEEEe
Q 010250 100 KKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLP-------F---YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFT 168 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~-------~---~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~ 168 (514)
.+++||.|+ ++||+ .+|++.+++.+++.+.. . +++...+..+...+++++|+++++ .+.++++
T Consensus 4 ~~~~~~~s~---~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~---~~~~l~~ 77 (370)
T PRK05937 4 SLSIDFVTN---DFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHG---APEAFIV 77 (370)
T ss_pred CceEEeECC---CccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhC---CCeEEEE
Confidence 468999998 89998 59999999999987641 1 223344567889999999999984 3568999
Q ss_pred CChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCC
Q 010250 169 NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET 248 (514)
Q Consensus 169 ~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (514)
+||+.|+...+... .++.++|+.+..+|+++..++..... ....
T Consensus 78 ~sG~~a~~~~~~~~---------~~~~d~ii~d~~~H~sv~~~~~~~~~--~~~~------------------------- 121 (370)
T PRK05937 78 PSGYMANLGLCAHL---------SSVTDYVLWDEQVHISVVYSLSVISG--WHQS------------------------- 121 (370)
T ss_pred CChHHHHHHHHHHh---------CCCCCEEEEEhhhhHHHHHHHHHcCC--ceEE-------------------------
Confidence 99999986443322 23467999999999998776654321 0000
Q ss_pred hhHHHHHHHHHHHHHHHHhC--CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-C-cccccccc
Q 010250 249 EEEYSTRLANNLEDLILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-A-FGRLGTMF 324 (514)
Q Consensus 249 ~~~~~~~~~~~le~li~~~~--~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G-~gr~G~~~ 324 (514)
|.++++++|++++.... +++..+|+++++++++|.+.| +++|.++|++||+++|+||+|+ | +|+.|..+
T Consensus 122 ---~~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~p----l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~ 194 (370)
T PRK05937 122 ---FRHNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAP----LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGF 194 (370)
T ss_pred ---ecCCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCch
Confidence 11223678888886432 134567889999999999998 9999999999999999999998 3 45555432
Q ss_pred eecccC---CCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc--c
Q 010250 325 GCDKYS---IKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER--N 399 (514)
Q Consensus 325 ~~~~~g---v~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~--~ 399 (514)
. ..++ +.+|+.||||+++..+ +++++.+++.+.+.... .+ ..++.+.+|.+++++.++++.+.+. .
T Consensus 195 ~-~~~~~~~~~~~~~tlsK~~g~~G---~~vl~~~~~~~~~~~~~---~~--~~~s~~~~~~~~~a~~aal~~l~~~~~~ 265 (370)
T PRK05937 195 C-HSLGYENFYAVLVTYSKALGSMG---AALLSSSEVKQDLMLNS---PP--LRYSTGLPPHLLISIQVAYDFLSQEGEL 265 (370)
T ss_pred H-HhhCCCCCcEEEEechhhhhcCc---eEEEcCHHHHHHHHHhC---CC--CeecCCCCHHHHHHHHHHHHHHHhCcHH
Confidence 2 2223 2357789999987622 44667777666554211 11 2234456788888888999988653 3
Q ss_pred HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----CCE
Q 010250 400 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----GDN 475 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----g~~ 475 (514)
..++++++.+++++.|.... + +....+.+... ....+.+.|.++||.+... ...
T Consensus 266 ~~~~l~~l~~~l~~~l~~~~--~--------~~~~~i~~~~~------------~~~~~~~~L~~~gi~v~~~~~~~~~~ 323 (370)
T PRK05937 266 ARKQLFRLKEYFAQKFSSAA--P--------GCVQPIFLPGI------------SEQELYSKLVETGIRVGVVCFPTGPF 323 (370)
T ss_pred HHHHHHHHHHHHHHhcCCCC--C--------CCEEEEEeCCh------------hHHHHHHHHHHCCeeEEeeCCCCCCE
Confidence 56777888888877775421 1 11122333321 1345778889999988732 457
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010250 476 IMMSPPFIMSPEEVDELISKYGKALKATEERV 507 (514)
Q Consensus 476 iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~ 507 (514)
||++++..+|+||||++++.|+++++++.+++
T Consensus 324 iRis~~~~~t~edid~l~~~L~~~~~~~~~~~ 355 (370)
T PRK05937 324 LRVNLHAFNTEDEVDILVSVLATYLEKYQKNV 355 (370)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999999999999999999999988765443
No 103
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.96 E-value=3.5e-27 Score=241.00 Aligned_cols=338 Identities=19% Similarity=0.258 Sum_probs=233.1
Q ss_pred EEeeeCcEEEeCCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCccc---cccccCCchHHHHHHHHHHhcCcCC
Q 010250 86 IEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFYH---SFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 86 ~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~~---~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
+.++.|.++. .+|++||||.+| ++||+ .+|+|++++.+++++..... ....+..+...++++.|++++.
T Consensus 3 ~~~~~~~~~~-~~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~--- 75 (360)
T TIGR00858 3 LDRGPGPEVV-RDGRRLLNFSSN---DYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG--- 75 (360)
T ss_pred cccCCCCeEE-ECCceEEecccC---CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC---
Confidence 4688999998 799999999998 68996 79999999999997643321 1112344667889999999874
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
.+..++.++|++++..+++.++ .+++.|++.++. |+.........+.+.. .++.
T Consensus 76 ~~~~i~~~~G~~~~~~~l~~~~--------~~gd~v~~~~~~-~~~~~~~~~~~g~~~~------------~~~~----- 129 (360)
T TIGR00858 76 TEAALLFSSGYLANVGVISALV--------GKGDLILSDALN-HASLIDGCRLSGARVR------------RYRH----- 129 (360)
T ss_pred CCCEEEECchHHHHHHHHHHhC--------CCCCEEEEEccc-cHHHHHHHHhcCCceE------------EecC-----
Confidence 2456777788999988776553 234566665544 4443333332222110 0111
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G 321 (514)
.+.+++++.+......++++++++++++++|.+.+ +++|.++|++||+++|+||+|+ +|..+
T Consensus 130 -------------~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~----~~~i~~l~~~~~~~li~De~~~-~~~~~ 191 (360)
T TIGR00858 130 -------------NDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAP----LPQLVALAERYGAWLMVDDAHG-TGVLG 191 (360)
T ss_pred -------------CCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcC----HHHHHHHHHHcCcEEEEECccc-ccCcC
Confidence 11467787776432135789999999998898776 9999999999999999999997 44443
Q ss_pred cc--ceecccCCCCc-----hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH
Q 010250 322 TM--FGCDKYSIKPD-----LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI 394 (514)
Q Consensus 322 ~~--~~~~~~gv~pD-----iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~ 394 (514)
.. .....+++.+| +.++||++++ +.|++++++++++.+.... . .+..+.+.++..++++.++++.
T Consensus 192 ~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~---~gG~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~a~~~al~~ 263 (360)
T TIGR00858 192 EDGRGTLEHFGLKPEPVDIQVGTLSKALGS---YGAYVAGSQALIDYLINRA---R--TLIFSTALPPAVAAAALAALEL 263 (360)
T ss_pred CCCCchHHhcCCCccCCcEEEEechhhhhc---cCcEEEcCHHHHHHHHHhC---c--cceecCCCCHHHHHHHHHHHHH
Confidence 21 12344556544 4478999875 3378889999988875321 0 1122344667888888899987
Q ss_pred Hhh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-
Q 010250 395 YKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS- 472 (514)
Q Consensus 395 ~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~- 472 (514)
+.. +++.++++++.+++.+.|+++ .... ....|.++++.+.... ....+.+.|+++||++.+.
T Consensus 264 ~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~---~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~gI~v~~~~ 328 (360)
T TIGR00858 264 IQEEPWRREKLLALIARLRAGLEAL-GFTL---MPSCTPIVPVIIGDNA-----------SALALAEELQQQGIFVGAIR 328 (360)
T ss_pred HhhCHHHHHHHHHHHHHHHHHHHHc-CCcc---CCCCCCEEEEEeCCHH-----------HHHHHHHHHHHCCeeEeeeC
Confidence 654 357889999999999999876 2221 1234667777764211 1456888999999999742
Q ss_pred -------CCEEEEeCCCCCCHHHHHHHHHHHH
Q 010250 473 -------GDNIMMSPPFIMSPEEVDELISKYG 497 (514)
Q Consensus 473 -------g~~iRi~p~~~~t~e~id~~~~~l~ 497 (514)
++.+|++++..++++|+++++++|+
T Consensus 329 ~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 329 PPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 2479999999999999999999763
No 104
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=5.2e-28 Score=232.40 Aligned_cols=385 Identities=18% Similarity=0.219 Sum_probs=285.0
Q ss_pred ccccccccccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCC-CCHHHHHHHHHHH
Q 010250 51 ASSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQL 129 (514)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l 129 (514)
.+.++.+++..+|.|++++.|.+..|+. ..+.++....+..++ +||+.+++|.|. |+||. .++++.+.+...+
T Consensus 48 lt~~eideLiedw~PEPLV~~~~~~~~~--~~~~v~e~~~~~~~~-i~G~~~~N~aS~---NfL~l~~~~~ike~a~~~l 121 (467)
T KOG1358|consen 48 LTEQEIDELIEDWEPEPLVPPVPEDHPV--LNTPVLESVMLPHVT-IDGKDVLNFASA---NFLGLIENEEIKEEASFTL 121 (467)
T ss_pred CCHHHHHHHHhcCCCCCCCCCCcccccc--cCCcccccccCCceE-ecCceeecccch---hhhhhcccHHHHHHHHHHH
Confidence 4567778889999999999999988865 233447777777777 899999999988 88887 5999999999999
Q ss_pred hcCCccc---cccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcc
Q 010250 130 NTLPFYH---SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHG 206 (514)
Q Consensus 130 ~~~~~~~---~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG 206 (514)
++++.++ +.|.++.+.+.+++++|++++ +.+..++.+.|..+++.++.+. .++.+|++.+..-+-
T Consensus 122 rkyGvGsCGPrGFYGt~DvHldlE~~iakF~---G~E~aivYs~gF~ti~S~ipaf---------sKrGDIi~~de~~nf 189 (467)
T KOG1358|consen 122 RKYGVGSCGPRGFYGTIDVHLDLEKRIAKFM---GTEDAIVYSYGFSTIESAIPAF---------SKRGDIIFVDEAVNF 189 (467)
T ss_pred HHhCCCCcCCCcccccceeecccHHHHHHhh---CCcceeeeccccchhhhcchhh---------hccCcEEEEehhhhH
Confidence 9976544 344568899999999999998 5677888999999999999765 467889999888877
Q ss_pred cceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC------C---CcEEEEEE
Q 010250 207 STLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG------P---ETIAAFIA 277 (514)
Q Consensus 207 ~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~------~---~~~aaviv 277 (514)
....++.+|.+... .|.|+++++||.++.+.. + .....+++
T Consensus 190 aIq~GlqlSRS~i~------------------------------~Fkhndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~ 239 (467)
T KOG1358|consen 190 AIQKGLQLSRSTIS------------------------------YFKHNDMEDLERLLPEQEDEDQKNPKKALTRRFIVV 239 (467)
T ss_pred HHHHHHhhhhheeE------------------------------EecCCCHHHHHHhccCcchhhhhccccccceEEEEE
Confidence 76666666654332 256677888888765422 1 12578999
Q ss_pred ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc--cceecccCCC---Cchhchh--hhhcCCcccce
Q 010250 278 EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--MFGCDKYSIK---PDLVSFA--KALSSAYMPIG 350 (514)
Q Consensus 278 Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~--~~~~~~~gv~---pDiv~~s--K~l~gG~~pig 350 (514)
|.++-+.|.++| |++|.++..||...+|.||..+ ||-.|+ .+..+|+++. .|+++.| -++++| |
T Consensus 240 EGl~~N~g~i~p----l~~iv~lk~Kyk~RvildEs~S-fG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~----G 310 (467)
T KOG1358|consen 240 EGLYANTGDICP----LPEIVKLKNKYKFRVILDESLS-FGVLGKTGRGVTEHFGVPITDIDIVTASMETALASG----G 310 (467)
T ss_pred EeeccCCCcccc----cHHHHHHHhhheEEEEEecccc-cccccccCccccccCCCCccceeeeeeccccccccc----C
Confidence 999999999999 9999999999999999999998 766666 5678999986 4555544 355543 3
Q ss_pred eEEeCHHHHHHhhhccCCCCcccccCCCCC--cHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHhhhhhccCCCceeEE
Q 010250 351 AILVSPEVSEVIHSQSNTLGSFSHGFTYSG--HPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEI 427 (514)
Q Consensus 351 ~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~--~pl~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v 427 (514)
+.++....+-..++ ....++.|+. .|+...+|..+++++++ +++.+.++.....+...|+.... +...-
T Consensus 311 gFc~G~~~i~~hQr------LSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~~s~--~~v~~ 382 (467)
T KOG1358|consen 311 GFCAGKSFIADHQR------LSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFHAALSSNSG--FIVSG 382 (467)
T ss_pred ceeecceeeEeeee------ccccceeeeccCchhhhhhHHHHHHHHhhCcchhhhhhccccccchhhhcCCc--eEEec
Confidence 44444444333332 1234455554 58888889999998875 45777788877888887776422 12222
Q ss_pred EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----------CCEEEEeCCCCCCHHHHHHHHHHH
Q 010250 428 RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----------GDNIMMSPPFIMSPEEVDELISKY 496 (514)
Q Consensus 428 ~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----------g~~iRi~p~~~~t~e~id~~~~~l 496 (514)
...+.++.+.+.....+. ..+..+.+.+...|..+|+++... ..+||++....+++|||+++.+.|
T Consensus 383 ~~~SPi~hl~l~~~~~s~---e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~i 459 (467)
T KOG1358|consen 383 SPESPIIHLQLERSYGSR---EKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELI 459 (467)
T ss_pred CcCCceeeeeecccccch---HHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHH
Confidence 234667777776644322 234455677888888889887632 247999999999999999999999
Q ss_pred HHHHHHH
Q 010250 497 GKALKAT 503 (514)
Q Consensus 497 ~~~l~~~ 503 (514)
+++...+
T Consensus 460 k~~~~~~ 466 (467)
T KOG1358|consen 460 KEVASAV 466 (467)
T ss_pred HHHHHhh
Confidence 9887543
No 105
>PLN02483 serine palmitoyltransferase
Probab=99.95 E-value=2.7e-26 Score=242.15 Aligned_cols=335 Identities=17% Similarity=0.211 Sum_probs=228.7
Q ss_pred CCCCEEEEccCCcccccCCCC--CHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCCh
Q 010250 97 VNGKKYLDSLAGLWCTALGGS--EPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSG 171 (514)
Q Consensus 97 ~dG~~ylD~~s~~~~~~lGh~--~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sG 171 (514)
.+++++|||.|+ ++||.+ ++.+.+++.+++++.... ++...++.+.+.+++++|+++++ .+..+++++|
T Consensus 97 ~~~~~~~n~~s~---~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g---~~~ai~~~~G 170 (489)
T PLN02483 97 TKTRRCLNLGSY---NYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG---KPAAIVFGMG 170 (489)
T ss_pred CCCceEEEeecC---CccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC---CCcEEEECCH
Confidence 457899999998 889985 677888888888775432 22234577889999999999984 3456677889
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhH
Q 010250 172 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE 251 (514)
Q Consensus 172 seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (514)
+.++..++.... .+++.||+.+.+|++ ...+...+|.....
T Consensus 171 ~~an~~~i~al~--------~~Gd~Vi~d~~~h~s-~~~~~~~~Ga~v~~------------------------------ 211 (489)
T PLN02483 171 YATNSTIIPALI--------GKGGLIISDSLNHNS-IVNGARGSGATIRV------------------------------ 211 (489)
T ss_pred HHHHHHHHHHhC--------CCCCEEEEcchhhHH-HHHHHHHcCCeEEE------------------------------
Confidence 999887776542 234566655555544 33333333322110
Q ss_pred HHHHHHHHHHHHHHHh----C-----CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-C-cccc
Q 010250 252 YSTRLANNLEDLILKE----G-----PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-A-FGRL 320 (514)
Q Consensus 252 ~~~~~~~~le~li~~~----~-----~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G-~gr~ 320 (514)
+.+++.+++++++.+. . |....+|++|++.++.|.+.+ +++|.++|++||+++|+||+|+ | +|++
T Consensus 212 ~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~----l~~I~~la~~~~~~livDEa~s~g~~G~~ 287 (489)
T PLN02483 212 FQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCK----LPEIVAVCKKYKAYVYLDEAHSIGAVGKT 287 (489)
T ss_pred EeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccC----HHHHHHHHHHcCCEEEEECcCccCccCCC
Confidence 0011135555555421 1 223568999999999999987 9999999999999999999997 1 3455
Q ss_pred cccceecccCCCC---chh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCC--CCcHHHHHHHHHHHH
Q 010250 321 GTMFGCDKYSIKP---DLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY--SGHPVSCAVAIEALK 393 (514)
Q Consensus 321 G~~~~~~~~gv~p---Div--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~--~~~pl~~aaa~aal~ 393 (514)
|.. ..+++++.| |++ +|||+++.. .|++++++++++.+... .++.++ +.+|..++++.++|+
T Consensus 288 G~g-~~~~~~v~~~~~dI~~~SfSKs~g~~---GG~i~~~~~li~~l~~~-------~~~~~~~~~~~p~~~~~~~aaL~ 356 (489)
T PLN02483 288 GRG-VCELLGVDPADVDIMMGTFTKSFGSC---GGYIAGSKELIQYLKRT-------CPAHLYATSMSPPAVQQVISAIK 356 (489)
T ss_pred CCc-hHHhcCCCcccCcEEEEecchhcccC---ceEEEcCHHHHHHHHHh-------CccccccCCcCHHHHHHHHHHHH
Confidence 533 456667654 666 799999752 37888999999998742 222233 346777778888898
Q ss_pred HHhhc-------cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250 394 IYKER-------NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 466 (514)
Q Consensus 394 ~~~~~-------~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 466 (514)
.+..+ +..++++++.+++++.|+++ ...+... ..+.+.++.+.... ....+++.|+++|
T Consensus 357 ~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~-G~~v~~~--~~sp~~~l~l~~~~-----------~~~~~~~~Ll~~G 422 (489)
T PLN02483 357 VILGEDGTNRGAQKLAQIRENSNFFRSELQKM-GFEVLGD--NDSPVMPIMLYNPA-----------KIPAFSRECLKQN 422 (489)
T ss_pred HHHhCccccchHHHHHHHHHHHHHHHHHHHHC-CCcccCC--CCCCEEEEEECCHH-----------HHHHHHHHHHHCC
Confidence 76522 24678888899999999876 2222111 12345555543221 1345888999999
Q ss_pred cEEEeeC--------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 467 MLVRVSG--------DNIMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 467 v~~~~~g--------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
|.+.+.+ ..+||++++.+|+|||++++++|+++++.+.-
T Consensus 423 I~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~~ 469 (489)
T PLN02483 423 VAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDLVGI 469 (489)
T ss_pred cEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhCc
Confidence 9998421 46999999999999999999999998876543
No 106
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.94 E-value=2.7e-25 Score=213.74 Aligned_cols=329 Identities=19% Similarity=0.227 Sum_probs=252.4
Q ss_pred ccCCcccccCCC-CCHHHHHHHHHHHhcCCc---cccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHH
Q 010250 105 SLAGLWCTALGG-SEPRLVAAATAQLNTLPF---YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVK 180 (514)
Q Consensus 105 ~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~---~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk 180 (514)
++|+ .+||. .||+|.+|+.+.+++.+. +.+...+.+..+.+|+++|+++. ..+..++++|..-||++.+-
T Consensus 176 WCSN---DYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LH---qK~aALlFsSCfVANDstLf 249 (570)
T KOG1360|consen 176 WCSN---DYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLH---QKEAALLFSSCFVANDSTLF 249 (570)
T ss_pred EecC---ccccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHh---cCcceeeeeeeeeccchHHH
Confidence 3666 66887 599999999999998432 34555677888999999999997 34678889999999999987
Q ss_pred HHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHH
Q 010250 181 LVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 260 (514)
Q Consensus 181 ~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 260 (514)
..-.. =..-+|+.+.+.|.+.+.++.-++.+.+ -|.|||+++|
T Consensus 250 tLak~-------lpgcei~SD~gNHASMI~GIrns~v~K~------------------------------IFrHND~~hL 292 (570)
T KOG1360|consen 250 TLAKK-------LPGCEIFSDEGNHASMIQGIRNSRVPKH------------------------------IFRHNDLDHL 292 (570)
T ss_pred HHHHH-------CCCcEEeccccchHHHHHHhhhcCCcce------------------------------eeccCCHHHH
Confidence 54211 1346788888999988877776665432 2678889999
Q ss_pred HHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce--ecccCC--CCchh
Q 010250 261 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG--CDKYSI--KPDLV 336 (514)
Q Consensus 261 e~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~--~~~~gv--~pDiv 336 (514)
+++++...+.....|-+|.|+++.|.++| |++|.++++|||++..+|||+. .|-.|..++ -++.|+ +.||+
T Consensus 293 ~~lL~~~~~svPKivAFEtVhSM~Gavcp----leelcDvah~yGAiTFlDEVHA-VGlYG~rGaGvgerdGvm~kvDiI 367 (570)
T KOG1360|consen 293 EQLLQSSPKSVPKIVAFETVHSMDGAVCP----LEELCDVAHKYGAITFLDEVHA-VGLYGPRGAGVGERDGVMHKVDII 367 (570)
T ss_pred HHHHHhCCCCCCceEEEeeeeccCCCcCC----HHHHHHHHHHhCceeeeehhhh-hccccCCCCCccccCCcchhhhhc
Confidence 99999887777889999999999999999 9999999999999999999998 666666443 466777 46887
Q ss_pred --chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHH
Q 010250 337 --SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER---NIVEQVNKIAPKF 411 (514)
Q Consensus 337 --~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l 411 (514)
|+||++|.= -|++.++..++|.+++.. . ...+|.+..|+.++.|++++++++.+ .++...+++..++
T Consensus 368 sGTLgKafGcV---GGYIAat~~LvDmiRSyA---a--GFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~ 439 (570)
T KOG1360|consen 368 SGTLGKAFGCV---GGYIAATRKLVDMIRSYA---A--GFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYV 439 (570)
T ss_pred ccchhhhcccc---cceehhhhhHHHHHHHhc---C--ceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 699999861 257888999999998531 1 23367788899999999999998754 3566777888899
Q ss_pred HhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEe-------eC-CEEEEeCCC
Q 010250 412 QDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRV-------SG-DNIMMSPPF 482 (514)
Q Consensus 412 ~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~-------~g-~~iRi~p~~ 482 (514)
++.|.++ ..|++. ....++.+.+.+.. +..+.+..|+ ++|+++.. .| +.+|++|.-
T Consensus 440 kq~l~~~-GiPVi~---~pSHIiPv~vgda~-----------l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP 504 (570)
T KOG1360|consen 440 KQLLMEL-GIPVIP---NPSHIIPVRVGDAA-----------LAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTP 504 (570)
T ss_pred HHHHHHc-CCcccC---CCcceeeeeccCHH-----------HHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCC
Confidence 9999886 444432 23344555554332 3445555554 67999872 23 469999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHH
Q 010250 483 IMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 483 ~~t~e~id~~~~~l~~~l~~~~ 504 (514)
.+|++.++.+++.+..+.+++.
T Consensus 505 ~HT~~mm~~lv~~l~~vw~~v~ 526 (570)
T KOG1360|consen 505 HHTPQMMNILVNALLDVWNEVG 526 (570)
T ss_pred CCCHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999988764
No 107
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.94 E-value=3.5e-24 Score=218.05 Aligned_cols=328 Identities=22% Similarity=0.270 Sum_probs=220.5
Q ss_pred CEEEEccCCcccccCCCC-CHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHH
Q 010250 100 KKYLDSLAGLWCTALGGS-EPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAN 175 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~-~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~ 175 (514)
++||.|+++ .+|||. ||+|++|+++.+++.... +....+..+...++.+.|+++++ .+..+++++|++++
T Consensus 1 ~~~~~~~~~---~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~~~~iv~~sg~~a~ 74 (349)
T cd06454 1 KKVLNFCSN---DYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHG---KEAALVFSSGYAAN 74 (349)
T ss_pred CCceecccC---CccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhC---CCCEEEeccHHHHH
Confidence 579999988 889995 999999999999874332 12223466778899999999884 34578889999999
Q ss_pred HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250 176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255 (514)
Q Consensus 176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (514)
..+++.+. .+++.|++.++ +|+.........+.... .++. .
T Consensus 75 ~~~~~~~~--------~~gd~Vl~~~~-~~~~~~~~~~~~g~~~~------------~~~~------------------~ 115 (349)
T cd06454 75 DGVLSTLA--------GKGDLIISDSL-NHASIIDGIRLSGAKKR------------IFKH------------------N 115 (349)
T ss_pred HHHHHHhc--------CCCCEEEEehh-hhHHHHHHHHHcCCceE------------EecC------------------C
Confidence 98887653 23456776554 44443322222221110 0000 0
Q ss_pred HHHHHHHHHHHhC-CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eecccC---
Q 010250 256 LANNLEDLILKEG-PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYS--- 330 (514)
Q Consensus 256 ~~~~le~li~~~~-~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~g--- 330 (514)
+.+++++++.+.. ++++++|+++++++.+|.+.+ +++|.++|++||+++|+||+|. +|..+..+ ......
T Consensus 116 ~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~livD~a~~-~g~~~~~~~~~~~~~~~~ 190 (349)
T cd06454 116 DMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP----LPELVDLAKKYGAILFVDEAHS-VGVYGPHGRGVEEFGGLT 190 (349)
T ss_pred CHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC----HHHHHHHHHHcCCEEEEEcccc-ccccCCCCCChhhhcccc
Confidence 1356777776432 346789999999999998876 9999999999999999999996 44333211 111111
Q ss_pred CCCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHH
Q 010250 331 IKPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKI 407 (514)
Q Consensus 331 v~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~ 407 (514)
...|++ +++|.++. +.|++++++++++.+.... .....+.+.++..++++.++++.+.+ ++..+++.++
T Consensus 191 ~~~~i~~~s~sK~~~~---~gG~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 262 (349)
T cd06454 191 DDVDIIMGTLGKAFGA---VGGYIAGSKELIDYLRSYA-----RGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQEN 262 (349)
T ss_pred ccCcEEEeechhhhcc---cCCEEECCHHHHHHHHHhc-----hhhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 234655 58898875 4477888999888876421 11222345678888888999988765 5578889999
Q ss_pred HHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--------CCEEEEe
Q 010250 408 APKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--------GDNIMMS 479 (514)
Q Consensus 408 ~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--------g~~iRi~ 479 (514)
.+++.+.|+++ ..+.... +.+.+..+.+.+.. ....+.+.|.++||.+.+. ++.||++
T Consensus 263 ~~~l~~~l~~~-g~~~~~~--~~~~~~~~~~~~~~-----------~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~ 328 (349)
T cd06454 263 VRYLRRGLKEL-GFPVGGS--PSHIIPPLIGDDPA-----------KAVAFSDALLERGIYVQAIRYPTVPRGTARLRIS 328 (349)
T ss_pred HHHHHHHHHhc-CCcccCC--CCCcEEEEeCCChH-----------HHHHHHHHHHhCCceEEEecCCccCCCCCeEEEE
Confidence 99999998875 2222211 11222223221110 2456888999999998752 2579999
Q ss_pred CCCCCCHHHHHHHHHHHHHH
Q 010250 480 PPFIMSPEEVDELISKYGKA 499 (514)
Q Consensus 480 p~~~~t~e~id~~~~~l~~~ 499 (514)
++...+++++++++++|+++
T Consensus 329 ~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 329 LSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred EeCCCCHHHHHHHHHHHHHh
Confidence 99889999999999999764
No 108
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.91 E-value=5.6e-23 Score=213.12 Aligned_cols=337 Identities=13% Similarity=0.062 Sum_probs=208.9
Q ss_pred CCcccccCCCCCHHHHHHHHHHHhcCCccccc-----cccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHH
Q 010250 107 AGLWCTALGGSEPRLVAAATAQLNTLPFYHSF-----WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKL 181 (514)
Q Consensus 107 s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~-----~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~ 181 (514)
.+++....||++|++++++..++ .....+.. +.+..+...+++++++++++ .+.+.++++++|+++.+.+++.
T Consensus 23 ~~l~~g~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g-~~~~~v~~~~~g~~~~~~~~~~ 100 (398)
T cd00613 23 SFLGSGTYKHNPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTG-MDVANASLQDEATAAAEAAGLA 100 (398)
T ss_pred ccccccccCCcCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHC-CCccceeccCchHHHHHHHHHH
Confidence 45666779999999998877776 32111111 22344566788999998874 2344788888888788888877
Q ss_pred HHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHH
Q 010250 182 VWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLE 261 (514)
Q Consensus 182 a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le 261 (514)
++.. +++.+.|++...+|+.+...+...+... + ..+..+++++.+ ..+.++++
T Consensus 101 ~~~~------~~~gd~Vl~~~~~h~~~~~~~~~~~~~~-----g---~~~~~v~~~~~~-------------~~d~~~l~ 153 (398)
T cd00613 101 AIRA------YHKRNKVLVPDSAHPTNPAVARTRGEPL-----G---IEVVEVPSDEGG-------------TVDLEALK 153 (398)
T ss_pred HHhc------ccCCCEEEEcCccCcchHHHHHHhcccC-----C---cEEEEeccCCCC-------------CcCHHHHH
Confidence 6522 2123445556778888766665444211 0 011112221111 01246666
Q ss_pred HHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc--hh
Q 010250 262 DLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FA 339 (514)
Q Consensus 262 ~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~s 339 (514)
+.+. +++++|++++++ ++|.+. ++|++|+++|++||+++|+|++|+.....+. ...+ .+|+++ ++
T Consensus 154 ~~i~----~~t~~viv~~~~-~~G~~~---~~l~~i~~la~~~g~~livD~~~~~~~~~~~---~~~~--~~d~~~~s~~ 220 (398)
T cd00613 154 EEVS----EEVAALMVQYPN-TLGVFE---DLIKEIADIAHSAGALVYVDGDNLNLTGLKP---PGEY--GADIVVGNLQ 220 (398)
T ss_pred HhcC----CCeEEEEEECCC-CCceec---chHHHHHHHHHhcCCEEEEEeccccccCCCC---hHHc--CCCEEEeecc
Confidence 6653 468888888875 568773 4689999999999999999998863211111 1112 478775 45
Q ss_pred hhh---cCCcccceeEEeCHHHHHHhhhccCC-------C-------C------c--ccccCCCCCcHHHHHHHHHHHHH
Q 010250 340 KAL---SSAYMPIGAILVSPEVSEVIHSQSNT-------L-------G------S--FSHGFTYSGHPVSCAVAIEALKI 394 (514)
Q Consensus 340 K~l---~gG~~pig~v~~~~~i~~~l~~~~~~-------~-------~------~--~~~~~t~~~~pl~~aaa~aal~~ 394 (514)
|.+ ++|++.+|++++++++++.+...... . . . ....++++++++.+.++.++++.
T Consensus 221 K~~~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~ 300 (398)
T cd00613 221 KTGVPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVY 300 (398)
T ss_pred ccCCCCCCCCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHH
Confidence 754 34447788888888887765321000 0 0 0 01234567778888888887877
Q ss_pred Hhhc---cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe
Q 010250 395 YKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV 471 (514)
Q Consensus 395 ~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~ 471 (514)
+.++ ++.+++++++++++++|+++......... ....+.+.+..... .....++..|.++|+++..
T Consensus 301 ~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~~~v~~~~~~~~~---------~~~~~~~~~L~~~gi~~~~ 369 (398)
T cd00613 301 LGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGP--FFHEFVLRLPPLYG---------IRAEDLAKALIDGGFHAPT 369 (398)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCC--eeEEEEEEcCCcch---------HHHHHHHHhhhhcCccccc
Confidence 6543 35688999999999999886221111111 11122333322100 0245688899999998765
Q ss_pred ----eCCEEEEeCCCCCCHHHHHHHHHHH
Q 010250 472 ----SGDNIMMSPPFIMSPEEVDELISKY 496 (514)
Q Consensus 472 ----~g~~iRi~p~~~~t~e~id~~~~~l 496 (514)
.++.||++|++.+|+||||++++.|
T Consensus 370 ~~~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 370 MYLPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred cccCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 3467999999999999999998864
No 109
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.90 E-value=1.1e-21 Score=201.07 Aligned_cols=339 Identities=15% Similarity=0.143 Sum_probs=222.6
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhcC-cCCCC-eEEEeCChhHHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEAND 176 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~-~v~~~~sGseA~~ 176 (514)
...||+..| .+--..++.+++++.+++.... +|+. ..+..++...+++++.+.++ ....+ .|+.|++++||+.
T Consensus 28 ~~vi~l~iG---~Pd~~~p~~i~~a~~~a~~~~~~~Y~~-~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~ 103 (393)
T COG0436 28 EDVIDLSIG---EPDFPTPEHIIEAAIEALEEGGTHYTP-SAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALF 103 (393)
T ss_pred CCEEEeCCC---CCCCCCCHHHHHHHHHHHhcccCCCCC-CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHH
Confidence 468888777 3433368889999999998764 3332 23455555666666666643 12333 4999999999999
Q ss_pred HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHH
Q 010250 177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTR 255 (514)
Q Consensus 177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 255 (514)
.++.... .+.+.||+.+++|-.+.......++.+.... ...+ ..|..
T Consensus 104 ~~~~a~~--------~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~-----------l~~~~~~f~~------------- 151 (393)
T COG0436 104 LAFLALL--------NPGDEVLIPDPGYPSYEAAVKLAGGKPVPVP-----------LDEEENGFKP------------- 151 (393)
T ss_pred HHHHHhc--------CCCCEEEEeCCCCcCHHHHHHhcCCEEEEEe-----------CCcCccCCcC-------------
Confidence 9998774 3456799999999887655555555433210 0000 11111
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc-cc-eecccCCC-
Q 010250 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MF-GCDKYSIK- 332 (514)
Q Consensus 256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~-~~-~~~~~gv~- 332 (514)
+.++|++.+. +++.+.++..|.|++ |. +.++++|++|.++|++||+++|+||+|.+|...|. .. ..+..+..
T Consensus 152 d~~~l~~~i~---~ktk~i~ln~P~NPT-Ga-v~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~ 226 (393)
T COG0436 152 DLEDLEAAIT---PKTKAIILNSPNNPT-GA-VYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARD 226 (393)
T ss_pred CHHHHHhhcC---ccceEEEEeCCCCCc-Cc-CCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcc
Confidence 1477777775 333444444555555 54 34679999999999999999999999999987774 22 12222211
Q ss_pred --CchhchhhhhcCCcccceeEEeC-HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh----ccHHHHHH
Q 010250 333 --PDLVSFAKALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE----RNIVEQVN 405 (514)
Q Consensus 333 --pDiv~~sK~l~gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~----~~~~~~~~ 405 (514)
.-+-+|||.++-.+|++|+++++ +++++.+.. .....+++.+.+++.++.++|+.-++ +...+..+
T Consensus 227 ~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~~-------~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~ 299 (393)
T COG0436 227 RTITINSFSKTYGMTGWRIGWVVGPPEELIAALRK-------LKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYR 299 (393)
T ss_pred eEEEEecccccccccccceeEeecChHHHHHHHHH-------HHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHH
Confidence 11226899555323999999999 888877752 12334567788899999999974321 23346788
Q ss_pred HHHHHHHhhhhhccCCCceeEEE-eeeeeEE-EEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee-------C-C
Q 010250 406 KIAPKFQDGVKAFSDSPIIGEIR-GTGLILG-TEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-------G-D 474 (514)
Q Consensus 406 ~~~~~l~~~L~~l~~~~~~~~v~-g~g~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~-------g-~ 474 (514)
++++.+.+.|+++ +...... ..|.++. .++.... ....|+..|++ .||.+.|+ | +
T Consensus 300 ~rrd~l~~~l~~~---~g~~~~~~p~Ga~Y~~~~i~~~~-----------d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~ 365 (393)
T COG0436 300 ERRDLLVEALNEI---GGLSVVKPPEGAFYLFPKIPELL-----------DSEEFAKKLLEEAGVAVVPGSGFGEPPGEG 365 (393)
T ss_pred HHHHHHHHHHHhc---CCeeeccCCCeeEEEEeecCCCC-----------CHHHHHHHHHHhCCEEEecccccCCCCCCC
Confidence 8888999988876 2222333 3455444 4443321 13456666665 58999874 1 3
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 475 NIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 475 ~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
.+|++ +..+++++++++++|.+.++.
T Consensus 366 ~vRis--~~~~~~~l~~a~~rl~~~~~~ 391 (393)
T COG0436 366 YVRLS--LATSEETLEEALRRLARFLAE 391 (393)
T ss_pred eEEEE--EecCHHHHHHHHHHHHHHHHh
Confidence 69999 888999999999999998865
No 110
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.90 E-value=2.5e-21 Score=199.55 Aligned_cols=343 Identities=13% Similarity=0.142 Sum_probs=214.7
Q ss_pred CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250 97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 176 (514)
Q Consensus 97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~ 176 (514)
.+++.+||+..+. +.++ .+|.+.+++.+++...... . ........++.+.++++++ .+.+++++++|+++|+.
T Consensus 25 ~~~~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~~--~-y~~~~g~~~lr~~ia~~l~-~~~~~v~~~~g~t~al~ 97 (380)
T PRK06225 25 FKDKEMIWMGQNT--NHLG-PHEEVREAMIRCIEEGEYC--K-YPPPEGFPELRELILKDLG-LDDDEALITAGATESLY 97 (380)
T ss_pred hhcCCeEEccCCC--CCCC-CCHHHHHHHHHHHhcCCCC--C-CCCCcchHHHHHHHHHhcC-CCCCcEEEeCCHHHHHH
Confidence 3456788887653 4454 6899999999988753211 1 1122335778889998874 34578999999999999
Q ss_pred HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHH
Q 010250 177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 256 (514)
Q Consensus 177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (514)
.+++.+. ..++.|++.+++|+....... ..|.... .++.... + +.+ ..+
T Consensus 98 ~~~~~~~--------~~gd~vl~~~p~y~~~~~~~~-~~g~~~~------------~v~~~~~-----~----~~~-~~d 146 (380)
T PRK06225 98 LVMRAFL--------SPGDNAVTPDPGYLIIDNFAS-RFGAEVI------------EVPIYSE-----E----CNY-KLT 146 (380)
T ss_pred HHHHHhc--------CCCCEEEEcCCCCcchHHHHH-HhCceEE------------eeccccc-----c----CCc-cCC
Confidence 9998763 234679999999875421111 1111110 0010000 0 000 112
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecc-cCCCCch
Q 010250 257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDK-YSIKPDL 335 (514)
Q Consensus 257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~-~gv~pDi 335 (514)
.+++++.+. ++..+.++++|. +.+|.+. +++.+++|.++|++||+++|+||+|.+|.. +....... .....++
T Consensus 147 ~~~l~~~~~---~~~~~v~l~~p~-NptG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~i~~ 220 (380)
T PRK06225 147 PELVKENMD---ENTRLIYLIDPL-NPLGSSY-TEEEIKEFAEIARDNDAFLLHDCTYRDFAR-EHTLAAEYAPEHTVTS 220 (380)
T ss_pred HHHHHhhcC---CCceEEEEeCCC-CCCCcCC-CHHHHHHHHHHHHHCCcEEEEehhHHHHhc-cCCchhhcCCCCEEEE
Confidence 456666553 233344456664 4556554 567899999999999999999999987632 22111111 0111235
Q ss_pred hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHh
Q 010250 336 VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQD 413 (514)
Q Consensus 336 v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~ 413 (514)
.+|||.++.+++++|++++++++++.+... ...+++.+.++++++.++++...+ +.+.+..+++.+.+.+
T Consensus 221 ~s~SK~~g~~G~RiG~i~~~~~l~~~~~~~--------~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~ 292 (380)
T PRK06225 221 YSFSKIFGMAGLRIGAVVATPDLIEVVKSI--------VINDLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKE 292 (380)
T ss_pred eechhhcCCccceeEEEecCHHHHHHHHHH--------HhcccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 588999973338999999999999887641 123566788888888777753211 1233344455556666
Q ss_pred hhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--------CCEEEEeCCCCCC
Q 010250 414 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--------GDNIMMSPPFIMS 485 (514)
Q Consensus 414 ~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--------g~~iRi~p~~~~t 485 (514)
.|+++.... +......|.++++.+..... ....+...|.++||.+.++ .+.+|++ +..+
T Consensus 293 ~L~~~~~~~-~~~~~~~g~~~~~~~~~~~~----------~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s--~~~~ 359 (380)
T PRK06225 293 AVDEIEGVF-LPVYPSHGNMMVIDISEAGI----------DPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVS--FSIP 359 (380)
T ss_pred HHHhCcCCc-cccCCCCCeEEEEEcccccC----------CHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEE--eCCC
Confidence 666542211 11223457777887754211 1345788888999998864 1369999 6678
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 010250 486 PEEVDELISKYGKALKATE 504 (514)
Q Consensus 486 ~e~id~~~~~l~~~l~~~~ 504 (514)
+|++++++++|++++++++
T Consensus 360 ~e~l~~~~~~l~~~~~~~~ 378 (380)
T PRK06225 360 REQVEVFCEEFPDVVETLR 378 (380)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 9999999999999998765
No 111
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=1.9e-21 Score=199.56 Aligned_cols=325 Identities=16% Similarity=0.155 Sum_probs=208.7
Q ss_pred EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc----C-cCCCCeEEEeCChhHHH
Q 010250 101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----T-ASKMAKVFFTNSGSEAN 175 (514)
Q Consensus 101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~----~-~~~~~~v~~~~sGseA~ 175 (514)
.++|+..|. ++++ .+|.+++++.+.+.........+ +.....+|.+.+++++ + ....++|++++|+++++
T Consensus 27 ~~i~l~~~~--~~~~-~~~~~~~al~~~l~~~~~~~~~Y--~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l 101 (368)
T PRK03317 27 VPVRLNTNE--NPYP-PSPALVADIAEAVAEAAAGLNRY--PDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEIL 101 (368)
T ss_pred ceeEecCCC--CCCC-CCHHHHHHHHHHHhhhhhhhccC--CCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHH
Confidence 368887663 3454 78899999998875321100111 2222345556666655 2 23567899999999999
Q ss_pred HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250 176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255 (514)
Q Consensus 176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (514)
..+++... ..++.|++..++|++........ +... ..++..+.|. .
T Consensus 102 ~~~~~~~~--------~~gd~v~v~~P~y~~~~~~~~~~-g~~~------------~~~~~~~~~~-------------~ 147 (368)
T PRK03317 102 QQLLQAFG--------GPGRTALGFVPSYSMHPIIARGT-HTEW------------VEGPRAADFT-------------L 147 (368)
T ss_pred HHHHHHhc--------CCCCEEEEeCCChHHHHHHHHhc-CCee------------EEcccCCCCC-------------C
Confidence 99998763 33467999999998864322211 1110 0011000111 1
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCch
Q 010250 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL 335 (514)
Q Consensus 256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDi 335 (514)
+++++++++... ++.++++...++++|.+.+ +++++++|+.+++++|+||+|++|++.|........+..|++
T Consensus 148 d~~~l~~~~~~~---~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~ 220 (368)
T PRK03317 148 DVDAAVAAIAEH---RPDVVFLTSPNNPTGTALP----LDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRL 220 (368)
T ss_pred CHHHHHHHHhcc---CCCEEEEeCCCCCCCCCCC----HHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCE
Confidence 146677666532 2334444455777888876 788888888889999999999999776654444444555777
Q ss_pred h---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHH
Q 010250 336 V---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKF 411 (514)
Q Consensus 336 v---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~~~~l 411 (514)
+ +|||+++.+++|+|++++++++++.+... ..+++.++++++++.++|+..+. .+..++++++.+.+
T Consensus 221 i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~~~---------~~~~~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l 291 (368)
T PRK03317 221 VVSRTMSKAFAFAGGRLGYLAAAPAVVDALRLV---------RLPYHLSAVTQAAARAALRHADELLASVAALRAERDRV 291 (368)
T ss_pred EEEEechhhhccchhhhhhhhCCHHHHHHHHhc---------CCCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Confidence 6 89999974338999999999999988731 13677889999999888874322 12234455556666
Q ss_pred HhhhhhccCCCceeEEEeeeeeEEE-EEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--CEEEEeCCCCCCHHH
Q 010250 412 QDGVKAFSDSPIIGEIRGTGLILGT-EFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIMMSPPFIMSPEE 488 (514)
Q Consensus 412 ~~~L~~l~~~~~~~~v~g~g~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--~~iRi~p~~~~t~e~ 488 (514)
.+.|++. ++ ......|.++.+ .+. ....+.+.|+++||++.+.+ +++|++ ..++++
T Consensus 292 ~~~L~~~---g~-~~~~~~~~~~~~~~~~--------------~~~~~~~~l~~~Gv~v~~~~~~~~iRi~---~~~~~~ 350 (368)
T PRK03317 292 VAWLREL---GL-RVAPSDANFVLFGRFA--------------DRHAVWQGLLDRGVLIRDVGIPGWLRVT---IGTPEE 350 (368)
T ss_pred HHHHHHC---CC-EeCCCCCcEEEEeccC--------------CHHHHHHHHHHCCEEEEeCCCCCeEEEe---cCCHHH
Confidence 6666553 22 112233444333 221 13457889999999998754 579999 357889
Q ss_pred HHHHHHHHHHHHH
Q 010250 489 VDELISKYGKALK 501 (514)
Q Consensus 489 id~~~~~l~~~l~ 501 (514)
+++++++|+++++
T Consensus 351 ~~~~~~~l~~~~~ 363 (368)
T PRK03317 351 NDAFLAALAEVLA 363 (368)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998875
No 112
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.90 E-value=1e-21 Score=198.58 Aligned_cols=302 Identities=14% Similarity=0.082 Sum_probs=198.6
Q ss_pred ccCCC-CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcC
Q 010250 112 TALGG-SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALG 190 (514)
Q Consensus 112 ~~lGh-~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~ 190 (514)
++||. +||+|.+|..+++++.+ ++.+.+.+|+++|+++++ .+.+++++++||++|+..++....
T Consensus 28 ~ylgl~~~~~~~~~~~~~~~~~~-------g~~~~~~~Le~~lA~~~g-~~~e~ilv~~gg~~a~~~~~~al~------- 92 (346)
T TIGR03576 28 DLTGLAGGFKIDEEDLELLETYV-------GPAIFEEKVQELGREHLG-GPEEKILVFNRTSSAILATILALE------- 92 (346)
T ss_pred ccccCCCChhHHHHHHHHHHHhc-------CCHHHHHHHHHHHHHHcC-CCcceEEEECCHHHHHHHHHHHhC-------
Confidence 45676 69999999999998752 456888999999999984 234899999999999999997663
Q ss_pred CCCccEEEEE--ecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC
Q 010250 191 RPNKKKFIAR--QKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG 268 (514)
Q Consensus 191 ~~~~~~ii~~--~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~ 268 (514)
.+++.|++. +..+|.+......++|...+. .. ++++++ . .
T Consensus 93 -~~gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~--------------~~------------------~l~~l~----~-~ 134 (346)
T TIGR03576 93 -PPGRKVVHYLPEKPAHPSIPRSCKLAGAEYFE--------------SD------------------ELSELK----K-I 134 (346)
T ss_pred -CCCCEEEECCCCCCCchhHHHHHHHcCCEEec--------------cC------------------CHHHHh----h-C
Confidence 234566653 234555543333333321100 00 012222 1 1
Q ss_pred CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc--cceecccCCCCchh--chhhhhcC
Q 010250 269 PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--MFGCDKYSIKPDLV--SFAKALSS 344 (514)
Q Consensus 269 ~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~--~~~~~~~gv~pDiv--~~sK~l~g 344 (514)
++..+|++++ .++.|.+.+ .+.|++|.++|++||+++|+||+|. .|..|. .+....++ +|++ +|||+|+|
T Consensus 135 -~~~~lIiitg-~s~~G~v~~-~~~L~~i~~la~~~~~~livDEAy~-~~~~~~~~~~~~~~~~--~divv~s~SKalaG 208 (346)
T TIGR03576 135 -DGTSLVVITG-STMDLKVVS-EEDLKRVIKQAKSKEAIVLVDDASG-ARVRRLYGQPPALDLG--ADLVVTSTDKLMDG 208 (346)
T ss_pred -cCceEEEEEC-CCCCCcccC-HHHHHHHHHHHHHcCCEEEEECCcc-ccccccCCCCCHHHcC--CcEEEeccchhccc
Confidence 2345667766 466787753 5669999999999999999999997 332221 11122233 4654 68999877
Q ss_pred CcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCce
Q 010250 345 AYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPII 424 (514)
Q Consensus 345 G~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~ 424 (514)
+++|++++++++++.+.... ..+.++.+|..++++.++|+.+..+...+.++++.+.+.+.++.+ .+.
T Consensus 209 --~r~G~v~~~~~li~~l~~~~-------~~~~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~~---~~~ 276 (346)
T TIGR03576 209 --PRGGLLAGRKELVDKIKSVG-------EQFGLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDKL---NVE 276 (346)
T ss_pred --cceEEEEeCHHHHHHHHHhh-------cCcccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhC---CCC
Confidence 78999999999999987421 122344678899999999987554456777888888887777754 111
Q ss_pred eEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee------CCEEEEeCCCCCCHH---HHHHHHHH
Q 010250 425 GEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS------GDNIMMSPPFIMSPE---EVDELISK 495 (514)
Q Consensus 425 ~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~------g~~iRi~p~~~~t~e---~id~~~~~ 495 (514)
..+.+ ++.+++.... ..+.....|.++||+++++ .+++||+ +..+++ +.+.++++
T Consensus 277 --~~~~~-f~~~~~~~~~-----------~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis--~~~~~~~~~~~~~~~~a 340 (346)
T TIGR03576 277 --RTPTG-FVIKGVEEEK-----------LIEIGLDLLRNYGIITITAVGMPGASKTLRFD--LAAKDAERIGDDYLVEA 340 (346)
T ss_pred --cCCCe-EEEEeCCCCC-----------HHHHHHHHHHhCCEEEeCCcccCCCCCeEEEE--EecChHHhcCHHHHHHH
Confidence 11222 4555543210 1234556777899999974 2579999 455544 79999999
Q ss_pred HHHHH
Q 010250 496 YGKAL 500 (514)
Q Consensus 496 l~~~l 500 (514)
|++.+
T Consensus 341 l~~~~ 345 (346)
T TIGR03576 341 VKDSL 345 (346)
T ss_pred HHhcc
Confidence 88764
No 113
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.88 E-value=2.6e-21 Score=191.29 Aligned_cols=343 Identities=20% Similarity=0.233 Sum_probs=217.5
Q ss_pred EEEEccCCcccccCCCCCHHHHHHHHHHHhcC-Cc---ccccccc-CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHH
Q 010250 101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTL-PF---YHSFWNR-TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAN 175 (514)
Q Consensus 101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~-~~---~~~~~~~-~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~ 175 (514)
.|+|..+... -+|++++++...+... .. .|.+ +. .....++..+.++++++ .+.++++||++|||++
T Consensus 3 iYlD~~ATTp------~~~~v~~~m~~~~~~~fgNPsS~H~~-G~~A~~~ve~AR~~iA~llg-a~~~eIiFTSG~TEsn 74 (386)
T COG1104 3 IYLDNAATTP------VDPEVLEAMLPYLTEVFGNPSSLHSF-GREARKAVEEAREQIAKLLG-ADPEEIIFTSGATESN 74 (386)
T ss_pred ccccccccCC------CCHHHHHHHHHHHHhhcCCccchhHh-HHHHHHHHHHHHHHHHHHhC-CCCCeEEEecCCcHHH
Confidence 5899877743 3799999999998764 11 1222 22 22333445566777764 4458999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250 176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255 (514)
Q Consensus 176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (514)
..||+.+.....+ .+++++||+. ..-|-..+.....-. +++|.+ ..+++. ..+..
T Consensus 75 NlaI~g~~~a~~~--~~~~~HIIts-~iEH~aVl~~~~~Le----~~g~~V-----tyl~V~-------------~~G~v 129 (386)
T COG1104 75 NLAIKGAALAYRN--AQKGKHIITS-AIEHPAVLNTCRYLE----RQGFEV-----TYLPVD-------------SNGLV 129 (386)
T ss_pred HHHHHhhHHhhhc--ccCCCeEEEc-ccccHHHHHHHHHHH----hcCCeE-----EEeCCC-------------CCCeE
Confidence 9999976433221 1234566664 445544332221110 112221 111111 12233
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCch
Q 010250 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL 335 (514)
Q Consensus 256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDi 335 (514)
++++|++++. +++..|.+..+||+.|+++| +++|.++|+++|++|++|-||+ +|+. ..+......|+
T Consensus 130 ~~e~L~~al~----~~T~LVSim~aNnE~G~IQp----I~ei~~i~k~~~i~fHvDAvQa-~Gki----pi~~~~~~vD~ 196 (386)
T COG1104 130 DLEQLEEALR----PDTILVSIMHANNETGTIQP----IAEIGEICKERGILFHVDAVQA-VGKI----PIDLEELGVDL 196 (386)
T ss_pred cHHHHHHhcC----CCceEEEEEecccCeeeccc----HHHHHHHHHHcCCeEEEehhhh-cCce----eccccccCcce
Confidence 3678888876 56889999999999999999 9999999999999999999997 8776 34444434799
Q ss_pred hchhh-hhcCCcccceeEEeCHHHHH-HhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHH
Q 010250 336 VSFAK-ALSSAYMPIGAILVSPEVSE-VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKF 411 (514)
Q Consensus 336 v~~sK-~l~gG~~pig~v~~~~~i~~-~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l 411 (514)
++||- .++|. -++|+++.++.+.- .+..++.+.+.... +| -|..+.++.-+|+++..+ +....++..++++|
T Consensus 197 ls~SaHK~~Gp-kGiGaLyv~~~~~~~p~i~GGgQE~g~Rs-GT--env~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l 272 (386)
T COG1104 197 LSFSAHKFGGP-KGIGALYVRPGVRLEPLIHGGGQERGLRS-GT--ENVPGIVGFGKAAEIAVEELEEENARLRKLRDRL 272 (386)
T ss_pred EEeehhhccCC-CceEEEEECCCCccCceeccCcCCCCCCC-CC--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99986 56665 67999999776532 12211111111111 11 233344444455555433 34577888999999
Q ss_pred Hhhhhhc-cCCCceeE-EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----------------
Q 010250 412 QDGVKAF-SDSPIIGE-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------------- 472 (514)
Q Consensus 412 ~~~L~~l-~~~~~~~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------------- 472 (514)
.++|.+. ...-+.+. .........+.|..-. ++.+...|..+||.++.+
T Consensus 273 ~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~------------gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~Am 340 (386)
T COG1104 273 EDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVE------------GESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAM 340 (386)
T ss_pred HHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCc------------HHHHHHhccccCeEEeccccccCCCCCccHHHHHc
Confidence 9999865 22111111 1223334455554432 445666677778888732
Q ss_pred -------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 473 -------GDNIMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 473 -------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
...|||+.....|++|||.+++.|.+.++++++
T Consensus 341 G~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~ 380 (386)
T COG1104 341 GISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLRE 380 (386)
T ss_pred CCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 146999999999999999999999999988765
No 114
>PRK07682 hypothetical protein; Validated
Probab=99.88 E-value=1.3e-20 Score=194.01 Aligned_cols=336 Identities=13% Similarity=0.124 Sum_probs=208.4
Q ss_pred EEEEccCCcccccCCCCCHHHHHHHHHHHhcC-CccccccccCCchHHHHHHHHHHhcCc-CCCC-eEEEeCChhHHHHH
Q 010250 101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTL-PFYHSFWNRTTKPSLDLAKELLEMFTA-SKMA-KVFFTNSGSEANDT 177 (514)
Q Consensus 101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~-~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~-~v~~~~sGseA~~~ 177 (514)
..|+|..|.. .++ .++.+.+++.+.+... ..|.. ..+..+....+++.+.+.++. ...+ +|++++||++|+..
T Consensus 21 ~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~ 96 (378)
T PRK07682 21 GVISLGVGEP--DFV-TPWNVREASIRSLEQGYTSYTA-NAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDV 96 (378)
T ss_pred CeEEeCCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 4678776643 344 4667888888877642 11211 122344455566666554321 2233 79999999999999
Q ss_pred HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcccCCCCCCChhHHHHH
Q 010250 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYWRYAHPGETEEEYSTR 255 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 255 (514)
+++... .+++.|++.+++|++........+.. .. .++. .+.|. .
T Consensus 97 ~~~~l~--------~~gd~vl~~~p~y~~~~~~~~~~g~~-~~------------~~~~~~~~~~~-------------~ 142 (378)
T PRK07682 97 AMRAII--------NPGDEVLIVEPSFVSYAPLVTLAGGV-PV------------PVATTLENEFK-------------V 142 (378)
T ss_pred HHHHhC--------CCCCEEEEeCCCchhhHHHHHHcCCE-EE------------EeecCCccCCC-------------C
Confidence 987663 34578999999998754322222211 10 0000 00000 1
Q ss_pred HHHHHHHHHHHhCCCcEEEE-EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccccee-cccCCCC
Q 010250 256 LANNLEDLILKEGPETIAAF-IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC-DKYSIKP 333 (514)
Q Consensus 256 ~~~~le~li~~~~~~~~aav-ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~-~~~gv~p 333 (514)
+.+++++.+. +++.++ ++.| ++.+|. ..+++.+++|.++|++||+++|+||+|..|...+....+ ...+..+
T Consensus 143 d~~~l~~~~~----~~~~~v~~~~p-~NPtG~-~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 216 (378)
T PRK07682 143 QPAQIEAAIT----AKTKAILLCSP-NNPTGA-VLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRE 216 (378)
T ss_pred CHHHHHhhcC----cccEEEEEECC-CCCcCc-CcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccC
Confidence 2466666553 234445 5555 666675 446788999999999999999999999988655432111 1122222
Q ss_pred c---hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--hccHHHHHHHHH
Q 010250 334 D---LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKIA 408 (514)
Q Consensus 334 D---iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~~~~~~~~~~~~ 408 (514)
. +.+|||.++..++++|++++++++++.+... ....+++.+++++.++.++|+..+ -++..+.++++.
T Consensus 217 ~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~~~-------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 289 (378)
T PRK07682 217 RTILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKI-------HQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRR 289 (378)
T ss_pred CEEEEecCcccccChhhhhhhhhcCHHHHHHHHHH-------HHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 2 3368999873238999999999999988642 112345567788888887775321 123456677888
Q ss_pred HHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEEEe
Q 010250 409 PKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMMS 479 (514)
Q Consensus 409 ~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iRi~ 479 (514)
+.+.+.|+++ ... ...+. |.++++.+..... ....+...++ ++||.+.++ .+++||+
T Consensus 290 ~~~~~~L~~~-~~~---~~~p~g~~~~~~~~~~~~~----------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis 355 (378)
T PRK07682 290 NFFVTSFNEI-GLT---CHVPGGAFYAFPSISSTGL----------SSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCS 355 (378)
T ss_pred HHHHHHHHHC-CCc---cCCCCeeEEEEEeccCCCC----------CHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEE
Confidence 8888888775 211 12233 3445555532111 1345777765 789999864 2569999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 480 PPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 480 p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+..+++++++++++|+++++++
T Consensus 356 --~~~~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 356 --YATSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred --eCCCHHHHHHHHHHHHHHHhhc
Confidence 5668999999999999988653
No 115
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.88 E-value=2.5e-20 Score=192.19 Aligned_cols=339 Identities=14% Similarity=0.102 Sum_probs=210.5
Q ss_pred EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHHHHH
Q 010250 101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDTQV 179 (514)
Q Consensus 101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~~Al 179 (514)
.++||..|.. .++ .++.+.+++.+.+.+....+....+..+....+++.+.+.++ ....+++++++||++|+..++
T Consensus 25 ~~i~l~~g~~--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~ 101 (382)
T PRK06108 25 GVLPLWFGES--DLP-TPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAA 101 (382)
T ss_pred CeEEecCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHH
Confidence 4688877753 243 478899999988765322111112344555666666665543 245679999999999999998
Q ss_pred HHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250 180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259 (514)
Q Consensus 180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (514)
+... ..++.|++.+++|.......... |... ..++... .+ ..+ ..+.++
T Consensus 102 ~~l~--------~~gd~vl~~~p~y~~~~~~~~~~-g~~~------------~~v~~~~------~~---~~~-~~d~~~ 150 (382)
T PRK06108 102 QALV--------GPGDEVVAVTPLWPNLVAAPKIL-GARV------------VCVPLDF------GG---GGW-TLDLDR 150 (382)
T ss_pred HHhc--------CCCCEEEEeCCCccchHHHHHHC-CCEE------------EEeeCCC------CC---CCc-cCCHHH
Confidence 8663 23467999999987653222111 1111 0011100 00 000 011466
Q ss_pred HHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc-cccc-e-ecccCCCCch-
Q 010250 260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL-GTMF-G-CDKYSIKPDL- 335 (514)
Q Consensus 260 le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~-G~~~-~-~~~~gv~pDi- 335 (514)
+++.+. .++.++++...++.+|.+. +.+.+++|.++|++||+++|+||+|.+|... +... . .......+.+
T Consensus 151 l~~~~~----~~~~~i~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i 225 (382)
T PRK06108 151 LLAAIT----PRTRALFINSPNNPTGWTA-SRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRII 225 (382)
T ss_pred HHHhcC----ccceEEEEECCCCCCCccc-CHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEE
Confidence 666553 2344555555566677654 6789999999999999999999999987433 2111 1 1111111222
Q ss_pred --hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHH
Q 010250 336 --VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKF 411 (514)
Q Consensus 336 --v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l 411 (514)
.+|||.++.+++++|++++++++++.+... ....+++.+++.+.++.++|+...+ +++.++++++.+.+
T Consensus 226 ~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l 298 (382)
T PRK06108 226 FVNSFSKNWAMTGWRLGWLVAPPALGQVLEKL-------IEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHL 298 (382)
T ss_pred EEeechhhccCcccceeeeeCCHHHHHHHHHH-------HHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 268998864338999999999998888631 1223456678888888888763211 34567777788888
Q ss_pred HhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEEEeCCC
Q 010250 412 QDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMMSPPF 482 (514)
Q Consensus 412 ~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iRi~p~~ 482 (514)
.+.|+++.. +....+. |.++++.+.+.. ....++..|+ ++||.+.++ .+.+|++...
T Consensus 299 ~~~L~~~~~---~~~~~p~~g~~~~~~l~~~~-----------~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~ 364 (382)
T PRK06108 299 VDALRALPG---VEVAKPDGAMYAFFRIPGVT-----------DSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR 364 (382)
T ss_pred HHHHHhCCC---CcccCCCeeEEEEEeCCCCC-----------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC
Confidence 888876522 2222233 445566665321 1345777765 579999763 2469999654
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q 010250 483 IMSPEEVDELISKYGKALK 501 (514)
Q Consensus 483 ~~t~e~id~~~~~l~~~l~ 501 (514)
+++++++++++|.++++
T Consensus 365 --~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 365 --DPARLDEAVERLRRFLA 381 (382)
T ss_pred --CHHHHHHHHHHHHHHHh
Confidence 99999999999988764
No 116
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.88 E-value=2.1e-20 Score=191.77 Aligned_cols=324 Identities=16% Similarity=0.192 Sum_probs=208.7
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT 177 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~ 177 (514)
++++++||.++. +++| .+|.+.+++.+.+.....| +.....++.+.++++++ .+.+++++++++++++..
T Consensus 30 ~~~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~y------~~~~~~~lr~~ia~~~~-~~~~~i~~t~G~~~~l~~ 99 (367)
T PRK02731 30 GIADIIKLASNE--NPLG-PSPKAIEAIRAAADELHRY------PDGSGFELKAALAEKFG-VDPERIILGNGSDEILEL 99 (367)
T ss_pred CCCceEEecCCC--CCCC-CCHHHHHHHHHHHHhhcCC------CCCcHHHHHHHHHHHhC-cCHHHEEEcCCHHHHHHH
Confidence 678899998874 4577 5788999999887653322 11223578888888874 345789999999998877
Q ss_pred HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
++.... ..++.|++.+++|.+....... .|.... .++.. .|. .++
T Consensus 100 ~~~~l~--------~~gd~vl~~~p~y~~~~~~~~~-~g~~~~------------~~~~~-~~~-------------~~~ 144 (367)
T PRK02731 100 LARAYL--------GPGDEVIYSEHGFAVYPIAAQA-VGAKPV------------EVPAK-DYG-------------HDL 144 (367)
T ss_pred HHHHhc--------CCCCEEEEecCCHHHHHHHHHH-cCCeEE------------Eeccc-CCC-------------CCH
Confidence 766542 2346899999998765432221 121110 11110 000 114
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh--cCCEEEEechhcCcccccc-cceecccCCCCc
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK--YDILFIADEVICAFGRLGT-MFGCDKYSIKPD 334 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~--~gillI~DEv~tG~gr~G~-~~~~~~~gv~pD 334 (514)
+++++.+. +++.+|++...++.+|.+.+ ++++.++|+. +|+++|+||+|..+...+. .......+..++
T Consensus 145 ~~l~~~~~----~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~ 216 (367)
T PRK02731 145 DAMLAAVT----PRTRLVFIANPNNPTGTYLP----AEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPN 216 (367)
T ss_pred HHHHHHhC----CCCcEEEEeCCCCCCCcCCC----HHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCC
Confidence 66666653 23455555666677787776 4556666655 4999999999987654332 122233333345
Q ss_pred hh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHH
Q 010250 335 LV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPK 410 (514)
Q Consensus 335 iv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~ 410 (514)
++ +|||.++.+++++|++++++++++.+... ..++..+++++.++.++|+..+ -++..+..+++.+.
T Consensus 217 ~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~l~~~---------~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 287 (367)
T PRK02731 217 VVVTRTFSKAYGLAGLRVGYGIAPPEIIDALNRV---------RQPFNVNSLALAAAVAALDDDAFVEKSRALNAEGMAW 287 (367)
T ss_pred EEEEeeehHhhcCcccceeeeeCCHHHHHHHHHc---------cCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 54 68998874338999999999999888742 1245567788888877775211 12345556666677
Q ss_pred HHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-----CEEEEeCCCCCC
Q 010250 411 FQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----DNIMMSPPFIMS 485 (514)
Q Consensus 411 l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-----~~iRi~p~~~~t 485 (514)
+.+.|++. .... ..+.|.++++.+.+.. ....+.+.|.++||.++++. +.||+++ .+
T Consensus 288 l~~~L~~~-g~~~---~~~~g~~~~i~~~~~~-----------~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~---~~ 349 (367)
T PRK02731 288 LTEFLAEL-GLEY---IPSVGNFILVDFDDGK-----------DAAEAYQALLKRGVIVRPVAGYGLPNALRITI---GT 349 (367)
T ss_pred HHHHHHHC-CCcc---CCCCceEEEEECCCCC-----------CHHHHHHHHHHCCEEEEeCCCCCCCCeEEEec---CC
Confidence 77777665 2211 2345788888873321 14568889999999998752 4799994 47
Q ss_pred HHHHHHHHHHHHHHHH
Q 010250 486 PEEVDELISKYGKALK 501 (514)
Q Consensus 486 ~e~id~~~~~l~~~l~ 501 (514)
.++++++++.|+++++
T Consensus 350 ~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 350 EEENRRFLAALKEFLA 365 (367)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8999999999988764
No 117
>PRK07324 transaminase; Validated
Probab=99.88 E-value=1.2e-20 Score=193.75 Aligned_cols=336 Identities=14% Similarity=0.114 Sum_probs=208.5
Q ss_pred EeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHH
Q 010250 95 YDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEA 174 (514)
Q Consensus 95 ~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA 174 (514)
++..|..++++..| -+.-..++.+ +|+.+++......+. ......+|.+.+++++...+.++|++++|+++|
T Consensus 21 ~~~~~~~~~~~~~~---e~~~~~~~~~-~~~~~~~~~~~~~Y~----~~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~a 92 (373)
T PRK07324 21 YDIAESCIDSLTLE---ELLALAGKNP-EAFYQELGQKKLTYG----WIEGSPEFKEAVASLYQNVKPENILQTNGATGA 92 (373)
T ss_pred cccccCCCCCCcHH---HHHhccCcch-HHHHHHHhcCCccCC----CCCCCHHHHHHHHHHhcCCChhhEEEcCChHHH
Confidence 55566666666544 2222256667 888888776432211 222345788888887644456899999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCChhHH
Q 010250 175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEY 252 (514)
Q Consensus 175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 252 (514)
+..++.... ..+++|++..++|..........+... ..++.. ..|.
T Consensus 93 l~~~~~~l~--------~~gd~Vl~~~P~y~~~~~~~~~~g~~v-------------~~v~~~~~~~~~----------- 140 (373)
T PRK07324 93 NFLVLYALV--------EPGDHVISVYPTYQQLYDIPESLGAEV-------------DYWQLKEENGWL----------- 140 (373)
T ss_pred HHHHHHHhC--------CCCCEEEEcCCCchhHHHHHHHcCCEE-------------EEEecccccCCC-----------
Confidence 999987663 335689999999876532222211111 011110 0000
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCC
Q 010250 253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK 332 (514)
Q Consensus 253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~ 332 (514)
.+.+++++++. +++.+|++...++.+|.+. +++.+++|.++|++||+++|+||+|.++...+..... ....
T Consensus 141 --~d~~~l~~~~~----~~~kli~i~~p~NPtG~~~-~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~--~~~~ 211 (373)
T PRK07324 141 --PDLDELRRLVR----PNTKLICINNANNPTGALM-DRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSI--ADLY 211 (373)
T ss_pred --CCHHHHHHhCC----CCCcEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCCh--hhcc
Confidence 01356665543 2345566655566667554 5788999999999999999999999987554321111 1112
Q ss_pred Cc---hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHH
Q 010250 333 PD---LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKI 407 (514)
Q Consensus 333 pD---iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~ 407 (514)
+. +-+|||.++..++++|++++++++++.+... ....+++.++++..++..+|+..++ +...+.++++
T Consensus 212 ~~~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~~~-------~~~~~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~ 284 (373)
T PRK07324 212 EKGISTNSMSKTYSLPGIRVGWIAANEEVIDILRKY-------RDYTMICAGVFDDMLASLALEHRDAILERNRKIVRTN 284 (373)
T ss_pred CCEEEEecchhhcCCccceeEEEecCHHHHHHHHHH-------hCcEEecCChHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 22 3378998874339999999999999888742 2223566777888777777753211 1233444555
Q ss_pred HHHHHhhhhhccCCCceeEEEeeee-eEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEeeC-----CEEEEeC
Q 010250 408 APKFQDGVKAFSDSPIIGEIRGTGL-ILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG-----DNIMMSP 480 (514)
Q Consensus 408 ~~~l~~~L~~l~~~~~~~~v~g~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g-----~~iRi~p 480 (514)
.+.+.+.|++. +.+..+.+.|. +..+.+.... ....++.+|+ +.||++.|+. +.+||+
T Consensus 285 ~~~l~~~l~~~---~~~~~~~p~gg~~~~i~~~~~~-----------~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis- 349 (373)
T PRK07324 285 LAILDEWVAKE---PRVSYVKPKAVSTSFVKLDVDM-----------PSEDFCLKLLKETGVLLVPGNRFDLEGHVRIG- 349 (373)
T ss_pred HHHHHHHHhcC---CCceEECCCceEEEEEEeCCCC-----------CHHHHHHHHHHhcCEEEECccccCCCCeEEEE-
Confidence 55565655543 33334444443 3445553211 1345777765 6799999863 579999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH
Q 010250 481 PFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 481 ~~~~t~e~id~~~~~l~~~l~~ 502 (514)
+..+++.+.+++++|.+++++
T Consensus 350 -~~~~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 350 -YCCDTETLKKGLKKLSEFLRE 370 (373)
T ss_pred -ecCCHHHHHHHHHHHHHHHHh
Confidence 677899999999999998865
No 118
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.87 E-value=4.5e-20 Score=189.48 Aligned_cols=326 Identities=16% Similarity=0.135 Sum_probs=198.7
Q ss_pred CCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCc
Q 010250 115 GGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK 194 (514)
Q Consensus 115 Gh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~ 194 (514)
-|.+|.+++++.+++......+..+.+......++++.++++++. +.+.++|++||++|+..+++.++.. ...++
T Consensus 30 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~-~~~~~~~~~ggt~a~~~a~~~~~~~----~~~~~ 104 (371)
T PRK13520 30 TEPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHL-PDAYGYITSGGTEANIQAVRAARNL----AKAEK 104 (371)
T ss_pred cCchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCC-CCCCeEEecCcHHHHHHHHHHHHhh----ccCCC
Confidence 358999999999988753222222223344456888999998852 3346889999999999999988632 11234
Q ss_pred cEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEE
Q 010250 195 KKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAA 274 (514)
Q Consensus 195 ~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aa 274 (514)
++||+.+.++...... ....|.. +..++.+..+ ..+.++|++.+.+ +....
T Consensus 105 ~~vl~~~~~h~s~~~~-~~~~g~~------------~~~v~~~~~~-------------~~d~~~l~~~i~~---~~~~v 155 (371)
T PRK13520 105 PNIVVPESAHFSFDKA-ADMLGVE------------LRRAPLDDDY-------------RVDVKAVEDLIDD---NTIGI 155 (371)
T ss_pred ceEEecCcchHHHHHH-HHHcCce------------EEEecCCCCC-------------cCCHHHHHHHHhh---CCEEE
Confidence 5787777665443211 1111111 1111111100 1125778887752 23334
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc----cccccceecccCCCCchhchh--hhhcCCccc
Q 010250 275 FIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG----RLGTMFGCDKYSIKPDLVSFA--KALSSAYMP 348 (514)
Q Consensus 275 vivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g----r~G~~~~~~~~gv~pDiv~~s--K~l~gG~~p 348 (514)
+++.+ ++++|.+.| +++|.++|++||+++|+||+|+++. +.+..+..... ..|.++++ |.+.+| +|
T Consensus 156 i~~~~-~~~tG~~~~----l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~--~vd~~~~s~~K~~~a~-~~ 227 (371)
T PRK13520 156 VGIAG-TTELGQVDP----IPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLP--GVDSITIDPHKMGLAP-IP 227 (371)
T ss_pred EEEcC-CcCCcccCC----HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCC--CCceEEECCccccCcc-CC
Confidence 44444 566788877 9999999999999999999998652 11111111122 23555443 643334 78
Q ss_pred ceeEEe-CHHHHHHhhhccCCCC---cccccCCCCCcHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHhhhhhccCC
Q 010250 349 IGAILV-SPEVSEVIHSQSNTLG---SFSHGFTYSGHPVSCAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAFSDS 421 (514)
Q Consensus 349 ig~v~~-~~~i~~~l~~~~~~~~---~~~~~~t~~~~pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~ 421 (514)
+|+++. ++++++.+........ .+.+.+|.+ +..++++.++|+.+.++ +..++..++++++++.|+++ ..
T Consensus 228 ~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~--~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~ 304 (371)
T PRK13520 228 AGGILFRDESYLDALAVDTPYLTSKKQATLTGTRS--GAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER-GF 304 (371)
T ss_pred ceEEEEcCHHHHHhhcccCccccCCCCcceEeecc--ChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 988876 5567776642110000 011122332 34567777888876544 36788888999999988875 32
Q ss_pred CceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--CEEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250 422 PIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIMMSPPFIMSPEEVDELISKYGKA 499 (514)
Q Consensus 422 ~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--~~iRi~p~~~~t~e~id~~~~~l~~~ 499 (514)
.++ ......++.+.+.+ ...+.+.|.++|+.+.... +.+|++++..+|++||+++++.|+++
T Consensus 305 ~~~--~~~~~~~v~~~~~~--------------~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~ 368 (371)
T PRK13520 305 EPV--IEPVLNIVAFDDPN--------------PDEVREKLRERGWRVSVTRCPEALRIVCMPHVTREHIENFLEDLKEV 368 (371)
T ss_pred EEe--cCCCceEEEEecCC--------------HHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHHHH
Confidence 211 11223355554431 3457788999999988653 56999988889999999999999987
Q ss_pred HH
Q 010250 500 LK 501 (514)
Q Consensus 500 l~ 501 (514)
++
T Consensus 369 ~~ 370 (371)
T PRK13520 369 KK 370 (371)
T ss_pred hh
Confidence 64
No 119
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.87 E-value=3e-20 Score=189.02 Aligned_cols=316 Identities=16% Similarity=0.208 Sum_probs=203.7
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV 179 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al 179 (514)
.+.|||.+|. +.++ .+|++++|+.+++.....+ +.....++.+.++++++ .+.+++++++++++++..++
T Consensus 19 ~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~y------~~~~~~~lr~~ia~~~~-~~~~~i~~~~G~~~~l~~~~ 88 (346)
T TIGR01141 19 KEVIKLNSNE--NPFG-PPPKAKEALRAEADKLHRY------PDPDPAELKQALADYYG-VDPEQILLGNGSDEIIELLI 88 (346)
T ss_pred CceEEccCCC--CCCC-CCHHHHHHHHHhHHHhhcC------CCCCHHHHHHHHHHHhC-cChHHEEEcCCHHHHHHHHH
Confidence 4799998774 3566 5889999999887543222 11223678888888874 34578999999999998887
Q ss_pred HHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250 180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259 (514)
Q Consensus 180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (514)
+... .++++|++.+++|......... .|... ..++....+ ..+.+.
T Consensus 89 ~~l~--------~~gd~v~~~~p~y~~~~~~~~~-~g~~~------------~~~~~~~~~-------------~~d~~~ 134 (346)
T TIGR01141 89 RAFL--------EPGDAVLVPPPTYSMYEISAKI-HGAEV------------VKVPLDEDG-------------QLDLED 134 (346)
T ss_pred HHhc--------CCCCEEEEcCCCHHHHHHHHHH-cCCeE------------EEeccCCCC-------------CCCHHH
Confidence 7652 2346899999888543221111 11111 111111000 011455
Q ss_pred HHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc--CCEEEEechhcCcccccccceecccCCCCchh-
Q 010250 260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY--DILFIADEVICAFGRLGTMFGCDKYSIKPDLV- 336 (514)
Q Consensus 260 le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~--gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv- 336 (514)
+++.+ . +++++|++...++.+|.+.+ ++++.++|+.+ |+++|+||+|.++...+... ......++++
T Consensus 135 l~~~~---~-~~~~~v~l~~p~NptG~~~~----~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~--~~~~~~~~~i~ 204 (346)
T TIGR01141 135 ILVAI---D-DKPKLVFLCSPNNPTGNLLS----RSDIEAVLERTPEDALVVVDEAYGEFSGEPSTL--PLLAEYPNLIV 204 (346)
T ss_pred HHHhc---C-CCCCEEEEeCCCCCCCCCCC----HHHHHHHHHhCCCCcEEEEECchhhhcCCccHH--HHHhhCCCEEE
Confidence 65543 2 34566666666777888876 56666666665 99999999998774322111 1111223433
Q ss_pred --chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Q 010250 337 --SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQD 413 (514)
Q Consensus 337 --~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~ 413 (514)
++||.++.+++++|++++++++.+.+... ..+++.+++++.++.++++... -++..++++++.+++++
T Consensus 205 ~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ 275 (346)
T TIGR01141 205 LRTLSKAFGLAGLRIGYAIANAEIIDALNKV---------RAPFNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYD 275 (346)
T ss_pred EehhhHhhhchhhhceeeecCHHHHHHHHhc---------cCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 68899865348999999999998888641 1245667888888877775432 23456777777888888
Q ss_pred hhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC------CEEEEeCCCCCCHH
Q 010250 414 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG------DNIMMSPPFIMSPE 487 (514)
Q Consensus 414 ~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g------~~iRi~p~~~~t~e 487 (514)
.|+++.. +......|.++++++.. . .+.+.+.|.++||.+.++. +.+|+++ .+++
T Consensus 276 ~L~~~~g---~~~~~~~g~~~~~~~~~-~------------~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~---~~~~ 336 (346)
T TIGR01141 276 GLKKLPG---LEVYPSDANFVLIRFPR-D------------ADALFEALLEKGIIVRDLNSYPGLPNCLRITV---GTRE 336 (346)
T ss_pred HHHhcCC---CEECCCcCCEEEEecCC-C------------HHHHHHHHHHCCeEEEeCCCcCCCCCeEEEec---CCHH
Confidence 8876522 22223356777777653 1 3567889999999998752 5699994 3899
Q ss_pred HHHHHHHHHH
Q 010250 488 EVDELISKYG 497 (514)
Q Consensus 488 ~id~~~~~l~ 497 (514)
|++++++.|+
T Consensus 337 ~i~~~~~~l~ 346 (346)
T TIGR01141 337 ENDRFLAALR 346 (346)
T ss_pred HHHHHHHHhC
Confidence 9999998763
No 120
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=2.6e-20 Score=190.51 Aligned_cols=318 Identities=14% Similarity=0.114 Sum_probs=200.9
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV 179 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al 179 (514)
..++||.+|. +.+| .+|.+.+++.++++...++ +.....++.+.+++++. .+.+++++++++++++..++
T Consensus 29 ~~~i~l~~n~--~~~~-~~~~v~~a~~~~~~~~~~~------p~~g~~~lr~~ia~~~~-~~~~~i~~t~G~~~~l~~~~ 98 (359)
T PRK03158 29 EKIVKLASNE--NPYG-PSPKVKEAIAAHLDELALY------PDGYAPELRTKVAKHLG-VDEEQLLFGAGLDEVIQMIS 98 (359)
T ss_pred CceEEecCCC--CCCC-CCHHHHHHHHHHHHHhhcC------CCCcHHHHHHHHHHHhC-CCHHHEEECCCHHHHHHHHH
Confidence 3689998875 3477 4889999999888654322 22335677888888773 34578999999999998887
Q ss_pred HHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250 180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259 (514)
Q Consensus 180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (514)
+... ..++.|++.+++|++....+... |... ..+++. .+. .++++
T Consensus 99 ~~~~--------~~gd~v~~~~p~y~~~~~~~~~~-g~~~------------~~~~~~-~~~-------------~d~~~ 143 (359)
T PRK03158 99 RALL--------NPGTNTVMAEPTFSQYRHNAIIE-GAEV------------REVPLK-DGG-------------HDLEA 143 (359)
T ss_pred HHHh--------CCCCEEEEcCCCHHHHHHHHHHc-CCeE------------EEEecC-CCC-------------cCHHH
Confidence 7653 33568999999998864322211 1111 111111 000 01355
Q ss_pred HHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh--cCCEEEEechhcCcccccc-cceecccCCCCc-h
Q 010250 260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK--YDILFIADEVICAFGRLGT-MFGCDKYSIKPD-L 335 (514)
Q Consensus 260 le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~--~gillI~DEv~tG~gr~G~-~~~~~~~gv~pD-i 335 (514)
+++.+. +++.++++...++++|.+.+ .+++.++++. +|+++|+||+|..|-..+. .......+-.+. +
T Consensus 144 l~~~~~----~~~~~v~i~~p~NPtG~~~~----~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi 215 (359)
T PRK03158 144 MLKAID----EQTKIVWICNPNNPTGTYVN----HEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLI 215 (359)
T ss_pred HHHhcC----CCCCEEEEeCCCCCCCCCCC----HHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEE
Confidence 555442 24455555555788888776 3445555544 6999999999987632221 111111111122 2
Q ss_pred h--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHH
Q 010250 336 V--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQ 412 (514)
Q Consensus 336 v--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~ 412 (514)
+ +|||.++..++++|++++++++++.+... ..+++.+++++.++.++|+.-. .+...+..+++.+.+.
T Consensus 216 ~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~---------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 286 (359)
T PRK03158 216 VLRTFSKAYGLAALRVGYGIASEELIEKLNIA---------RPPFNTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYY 286 (359)
T ss_pred EEEechHhhcCcchhhehhcCCHHHHHHHHHh---------cCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 2 79999984338999999999999888641 1246778899999988885211 1123344455555565
Q ss_pred hhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCCCHH
Q 010250 413 DGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSPE 487 (514)
Q Consensus 413 ~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~t~e 487 (514)
+.|++. + +...++.|.++++.+..+ ...+.+.|+++||.+.++ .++|||+ ..+++
T Consensus 287 ~~l~~~---~-~~~~~~~g~~i~~~~~~~-------------~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~---~~~~~ 346 (359)
T PRK03158 287 AFCKEY---G-LFYYPSQTNFIFVDTGRD-------------ANELFEALLKKGYIVRSGAALGFPTGVRIT---IGLKE 346 (359)
T ss_pred HHHHHC---C-CeeCCCcCcEEEEECCCC-------------HHHHHHHHHHCCeEEeeCCCCCCCCeEEEe---cCCHH
Confidence 655543 2 222344577777766311 345778889999999984 3579999 45899
Q ss_pred HHHHHHHHHHHH
Q 010250 488 EVDELISKYGKA 499 (514)
Q Consensus 488 ~id~~~~~l~~~ 499 (514)
++++++++|+++
T Consensus 347 ~~~~l~~al~~~ 358 (359)
T PRK03158 347 QNDKIIELLKEL 358 (359)
T ss_pred HHHHHHHHHHHh
Confidence 999999999875
No 121
>PLN00175 aminotransferase family protein; Provisional
Probab=99.86 E-value=2.2e-19 Score=186.66 Aligned_cols=338 Identities=12% Similarity=0.055 Sum_probs=208.4
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-CCCC-eEEEeCChhHHHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKMA-KVFFTNSGSEANDT 177 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~-~v~~~~sGseA~~~ 177 (514)
...|||..|... +. .++.+.+++.+.+++....+....+..+....+++.+.+.++- .+.+ ++++++|+++|+..
T Consensus 54 ~~~i~l~~G~P~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~ 130 (413)
T PLN00175 54 HGAINLGQGFPN--FD-GPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAA 130 (413)
T ss_pred CCeEecCCCCCC--CC-CCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHH
Confidence 357898877542 22 4788899998888752111111122333444455555443321 2334 69999999999998
Q ss_pred HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHH
Q 010250 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRL 256 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 256 (514)
++.... ..++.|++.+++|.+........+.... .++.. +.|. .+
T Consensus 131 ~~~~l~--------~~gd~Vlv~~P~y~~~~~~~~~~g~~~~-------------~v~~~~~~~~-------------~~ 176 (413)
T PLN00175 131 TILGLI--------NPGDEVILFAPFYDSYEATLSMAGAKIK-------------TVTLRPPDFA-------------VP 176 (413)
T ss_pred HHHHhC--------CCCCEEEEeCCCchhHHHHHHHcCCEEE-------------EEECCcccCC-------------CC
Confidence 887543 3357899999999776432222211110 11110 0011 11
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-ecccCCCCch
Q 010250 257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYSIKPDL 335 (514)
Q Consensus 257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~~gv~pDi 335 (514)
+++|++.+. .++.+|++...++.+|.+. +++.+++|.++|++||+++|+||+|..+...+.... .+..+..+.+
T Consensus 177 ~~~l~~~~~----~~~k~i~i~~p~NPtG~~~-s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~v 251 (413)
T PLN00175 177 EDELKAAFT----SKTRAILINTPHNPTGKMF-TREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERT 251 (413)
T ss_pred HHHHHHhcC----cCceEEEecCCCCCCCcCC-CHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcE
Confidence 466766663 2355666666667777654 678999999999999999999999987743332211 1222222222
Q ss_pred h---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHH
Q 010250 336 V---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPK 410 (514)
Q Consensus 336 v---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~ 410 (514)
+ +|||.++..++++|++++++++++.+... ....+++.+++.+.++.++|+..+. ++..+.++++.+.
T Consensus 252 i~i~SfSK~~~~~G~RiG~~v~~~~l~~~l~~~-------~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~ 324 (413)
T PLN00175 252 VTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQA-------HSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDI 324 (413)
T ss_pred EEEecchhhccCcchheeeeEeCHHHHHHHHHH-------HhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 2 68999874339999999999998888631 1223567777888888777753211 3456677778888
Q ss_pred HHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee----------CCEEEE
Q 010250 411 FQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS----------GDNIMM 478 (514)
Q Consensus 411 l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~----------g~~iRi 478 (514)
+.+.|++. ... ..... |.++++.+...... ....++..|+ ++||.+.|+ .+.|||
T Consensus 325 l~~~L~~~-g~~---~~~p~g~~f~~~~~~~~~~~---------~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRl 391 (413)
T PLN00175 325 LVEGLKEV-GFK---VYPSSGTYFVMVDHTPFGFE---------NDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRF 391 (413)
T ss_pred HHHHHHHC-CCe---ecCCCeeEEEEEeccccCCC---------CHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEE
Confidence 88888765 211 12233 44566665321100 1345777776 569998864 136999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHH
Q 010250 479 SPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 479 ~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
+ +..+++++++++++|.+.++
T Consensus 392 s--~~~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 392 A--FCKDEETLRAAVERMKTKLK 412 (413)
T ss_pred E--EcCCHHHHHHHHHHHHHHHh
Confidence 9 56789999999999998765
No 122
>PLN02721 threonine aldolase
Probab=99.86 E-value=1.3e-19 Score=184.81 Aligned_cols=335 Identities=17% Similarity=0.141 Sum_probs=200.1
Q ss_pred EEEEccCCcccccCCCCCHHHHHHHHHH-HhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250 101 KYLDSLAGLWCTALGGSEPRLVAAATAQ-LNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV 179 (514)
Q Consensus 101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~-l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al 179 (514)
+++||.++.+. ..+|.+.+|+.+. ...... ++.+...++++.|++++. .+.++++++|++++..++
T Consensus 6 ~~~~~~~~~~~----~~~~~~~~a~~~~~~~~~~~------~~~~~~~~l~~~la~~~~---~~~~~~~~~Gs~a~~~~l 72 (353)
T PLN02721 6 RVVDLRSDTVT----KPTDAMRAAMANAEVDDDVL------GYDPTALRLEEEMAKIFG---KEAALFVPSGTMGNLISV 72 (353)
T ss_pred hhhhhhccccc----CCCHHHHHHHHhccCCCccc------CCCHHHHHHHHHHHHHhC---CceeEEecCccHHHHHHH
Confidence 56788888654 2688999998764 221111 134456899999999983 456899999999998887
Q ss_pred HHHHHHHhhcCCCCccEEEEEecCCcccce-e-eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250 180 KLVWYYNNALGRPNKKKFIARQKSYHGSTL-I-AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257 (514)
Q Consensus 180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~-~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
.... ..+++.|++.+++|..... + .....|... ..++....+ ..++
T Consensus 73 ~~~~-------~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~-------------~~d~ 120 (353)
T PLN02721 73 LVHC-------DVRGSEVILGDNSHIHLYENGGISTLGGVHP------------RTVKNNEDG-------------TMDL 120 (353)
T ss_pred HHHc-------cCCCCeEEEcCccceehhcccchhhhcCcee------------EecCCCcCC-------------CcCH
Confidence 7653 1135678888887632211 0 111111110 001110000 0125
Q ss_pred HHHHHHHHHhC---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-ceecccCCCC
Q 010250 258 NNLEDLILKEG---PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGCDKYSIKP 333 (514)
Q Consensus 258 ~~le~li~~~~---~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~~~~gv~p 333 (514)
+++++.+.+.. .+++++|++++++++.|...++.+.+++|.++|++||+++|+||++. ++-.... ..........
T Consensus 121 ~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~-~~~~~~~~~~~~~~~~~~ 199 (353)
T PLN02721 121 DAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARI-FNASVALGVPVHRLVKAA 199 (353)
T ss_pred HHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhh-hcchhhhCCCHHHHhhhC
Confidence 77777775321 13578899988766543345567889999999999999999999986 4321100 0011111123
Q ss_pred c--hhchhhhhcCCccccee-EEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Q 010250 334 D--LVSFAKALSSAYMPIGA-ILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPK 410 (514)
Q Consensus 334 D--iv~~sK~l~gG~~pig~-v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~ 410 (514)
| +++++|++++ |+|+ +++++++++.+.... ....+ +....+..+++++.+++...+ ..++..++.++
T Consensus 200 d~~~~s~sK~l~~---~~G~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~ 269 (353)
T PLN02721 200 DSVSVCLSKGLGA---PVGSVIVGSKSFIRKAKRLR----KTLGG-GMRQVGVLAAAALVALQENVP--KLEDDHKKAKL 269 (353)
T ss_pred CEEEEecccccCC---ceeeEEecCHHHHHhHHHHH----HhcCC-CeehhHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 4 3468899874 5665 567888887764311 00111 111112334444555543222 23344566778
Q ss_pred HHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHHHH
Q 010250 411 FQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEV 489 (514)
Q Consensus 411 l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e~i 489 (514)
+.+.|+++..... ......+.++.+.+..... . ....+++.|.++|+.+.+.+ ..||+++++.++++|+
T Consensus 270 l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~L~~~gi~v~~~~~~~lR~~~~~~~~~~~i 339 (353)
T PLN02721 270 LAEGLNQIKGLRV-NVAAVETNIVYFDITDGSR-I--------TAEKLCKSLEEHGVLLMPGNSSRIRVVTHHQISDSDV 339 (353)
T ss_pred HHHHHHhCCCcEE-ecCCccceEEEEEccCCcc-c--------cHHHHHHHHHhCCcEEecCCCceEEEEecCcCCHHHH
Confidence 8888876622211 0112234567777653210 0 14568899999999999876 5699999989999999
Q ss_pred HHHHHHHHHHHH
Q 010250 490 DELISKYGKALK 501 (514)
Q Consensus 490 d~~~~~l~~~l~ 501 (514)
++++++|++++.
T Consensus 340 ~~~~~~l~~~~~ 351 (353)
T PLN02721 340 QYTLSCFQQAAL 351 (353)
T ss_pred HHHHHHHHHHhh
Confidence 999999998765
No 123
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.86 E-value=1.3e-19 Score=182.81 Aligned_cols=321 Identities=18% Similarity=0.266 Sum_probs=220.0
Q ss_pred EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHH
Q 010250 101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVK 180 (514)
Q Consensus 101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk 180 (514)
..+|+.+|- +++| .+|++.+++.+.++.+..| +.....++.+.+++.+.....+.|+.+|+.+|.+...++
T Consensus 23 ~~i~LssNe--nP~g-p~~~~~~~~~~~~~~~~rY------Pd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~ 93 (356)
T COG0079 23 GIIKLSSNE--NPYG-PPPKVIEAIRAALDKLNRY------PDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVR 93 (356)
T ss_pred cceeecCCC--CCCC-CCHHHHHHHHHHHHhhccC------CCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHH
Confidence 689988875 7788 4589999998888754433 334567888999888753556799999999999999998
Q ss_pred HHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHH
Q 010250 181 LVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 260 (514)
Q Consensus 181 ~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 260 (514)
+.. .++++|++..++|.-+...+...+... ..++..+ |+ .|+
T Consensus 94 ~~~--------~~gd~vl~~~Ptf~~Y~~~a~~~g~~~-------------~~v~~~~-~~----------------~d~ 135 (356)
T COG0079 94 AFV--------EPGDTVLIPEPTFSMYEIAAQLAGAEV-------------VKVPLKE-FR----------------LDL 135 (356)
T ss_pred Hhh--------cCCCEEEEcCCChHHHHHHHHhcCCeE-------------EEecccc-cc----------------cCH
Confidence 875 344799999999977654444333211 1111111 11 233
Q ss_pred HHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCc-hh---
Q 010250 261 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPD-LV--- 336 (514)
Q Consensus 261 e~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pD-iv--- 336 (514)
+.++.....+....+++.|.|++|. .. +.+.++++.+.|.+ +++||+||+|..|+. . -...... .++ ++
T Consensus 136 ~~~~~~~~~~~~lv~i~nPNNPTG~-~~-~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~--~-~~~~l~~-~~~nlivlR 208 (356)
T COG0079 136 DAILAAIRDKTKLVFLCNPNNPTGT-LL-PREELRALLEALPE-GGLVVIDEAYIEFSP--E-SSLELLK-YPPNLIVLR 208 (356)
T ss_pred HHHHHhhhcCCCEEEEeCCCCCCCC-CC-CHHHHHHHHHhCCC-CcEEEEeCchhhcCC--c-hhhhhcc-CCCCEEEEE
Confidence 3333322222345666777776654 33 44667777777777 999999999998855 1 1122222 334 44
Q ss_pred chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHhhh
Q 010250 337 SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQDGV 415 (514)
Q Consensus 337 ~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L 415 (514)
||||++|-.++++|++++++++++.+... ...|+.|.++++++.++|+.-+. +...+.+.+.++++.+.|
T Consensus 209 TfSKa~gLAGlRlGy~ia~~~~i~~l~~v---------r~p~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l 279 (356)
T COG0079 209 TFSKAFGLAGLRVGYAIANPELIAALNKV---------RPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAAL 279 (356)
T ss_pred ecHHhhhcchhceeeccCCHHHHHHHHHh---------cCCCCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 79997665449999999999999999842 25778888999999998864321 345677778888888888
Q ss_pred hhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC------CEEEEeCCCCCCHHHH
Q 010250 416 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG------DNIMMSPPFIMSPEEV 489 (514)
Q Consensus 416 ~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g------~~iRi~p~~~~t~e~i 489 (514)
+.+ ++.......+.++.+++.+. . ...+.+.|+++||+++..+ +++|++ +-|+||.
T Consensus 280 ~~~---~~~~v~pS~aNFvlv~~~~~-----------~-~~~l~~~L~~~giivR~~~~~~~~~~~lRit---vgt~een 341 (356)
T COG0079 280 KAL---GLFGVFPSQANFVLVRVPDA-----------E-AAALAEALLKKGILVRDCSSVGLLPGYLRIT---VGTPEEN 341 (356)
T ss_pred HhC---CCCeecCCCCcEEEEECCCc-----------c-HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEE---eCCHHHH
Confidence 876 21112233366666666531 1 2347789999999999764 379999 7789999
Q ss_pred HHHHHHHHHHHHH
Q 010250 490 DELISKYGKALKA 502 (514)
Q Consensus 490 d~~~~~l~~~l~~ 502 (514)
++++++|.++++.
T Consensus 342 ~~ll~AL~~~~~~ 354 (356)
T COG0079 342 DRLLAALREVLKG 354 (356)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999988753
No 124
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.86 E-value=2.5e-19 Score=184.55 Aligned_cols=334 Identities=16% Similarity=0.194 Sum_probs=203.2
Q ss_pred EEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-cccc---ccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250 102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFW---NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT 177 (514)
Q Consensus 102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~~~~---~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~ 177 (514)
|||..+. +.-++.|++++.+.+.....+ +... ....+...++.+.++++++. ..++++|++||++++..
T Consensus 2 yld~aa~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~-~~~~i~~t~~~t~a~~~ 74 (379)
T TIGR03402 2 YLDNNAT------TRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGA-EPDEIIFTSGGTESDNT 74 (379)
T ss_pred cCCCcCC------CCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCC-CCCeEEEeCcHHHHHHH
Confidence 6776544 346789999999887542111 1110 01123456677888888853 46789999999999999
Q ss_pred HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeec--CCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL--SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (514)
+++.+.... ++++.||+....|++.......+ .|.. +..++.+..+ ..
T Consensus 75 al~~~~~~~-----~~~~~vv~~~~~~~s~~~~~~~~~~~G~~------------v~~v~~~~~g-------------~~ 124 (379)
T TIGR03402 75 AIKSALAAQ-----PEKRHIITTAVEHPAVLSLCQHLEKQGYK------------VTYLPVDEEG-------------RL 124 (379)
T ss_pred HHHHHHHhc-----CCCCeEEEcccccHHHHHHHHHHHHcCCE------------EEEEccCCCC-------------cC
Confidence 998764221 33456666665555432111111 1111 1111111100 01
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCch
Q 010250 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL 335 (514)
Q Consensus 256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDi 335 (514)
+.+++++.+. +++.++++..+++.+|.+.| +++|.++|++||+++|+|++|+ +|.. ..+.....+|+
T Consensus 125 ~~~~l~~~i~----~~~~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~~~~-~g~~----~~~~~~~~~D~ 191 (379)
T TIGR03402 125 DLEELRAAIT----DDTALVSVMWANNETGTIFP----IEEIGEIAKERGALFHTDAVQA-VGKI----PIDLKEMNIDM 191 (379)
T ss_pred CHHHHHHhcC----CCcEEEEEEcccCCeeeccc----HHHHHHHHHHcCCEEEEECccc-cccc----ccCcccCCCCE
Confidence 2467777664 35678888888888999888 8999999999999999999997 5432 22333456799
Q ss_pred hchh--hhhcCCcccceeEEeCHHHHHHhhhcc---CCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHH
Q 010250 336 VSFA--KALSSAYMPIGAILVSPEVSEVIHSQS---NTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIA 408 (514)
Q Consensus 336 v~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~---~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~ 408 (514)
+++| | +.|+ .++|+++.+++.. +.+.. ....... ....|..+..+..++++.+.+ ++..++.+++.
T Consensus 192 ~~~s~~K-~~gp-~G~g~l~v~~~~~--~~p~~~g~~~~~~~~---~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~ 264 (379)
T TIGR03402 192 LSLSGHK-LHGP-KGVGALYIRKGTR--FRPLLRGGHQERGRR---AGTENVPGIVGLGKAAELATEHLEEENTRVRALR 264 (379)
T ss_pred EEEcHHH-cCCC-CceEEEEECCCCC--CCCcccCCccCCCcC---CCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 9888 9 6654 5688888887642 22100 0000011 123345556666677776643 23456777777
Q ss_pred HHHHhhhhh-ccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--------------
Q 010250 409 PKFQDGVKA-FSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------------- 472 (514)
Q Consensus 409 ~~l~~~L~~-l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------------- 472 (514)
+++++.|++ +....+....... +.++.+.+.... ...+...|.++||.++.+
T Consensus 265 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~ 332 (379)
T TIGR03402 265 DRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYIE------------GEAILLLLDMEGICASSGSACTSGSLEPSHVL 332 (379)
T ss_pred HHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCCC------------HHHHHHhhccCCEEEEchhhcCCCCCCcCHHH
Confidence 888887764 4221111110001 123334333211 345777888899998742
Q ss_pred ----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 473 ----------GDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 473 ----------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
.+.||++++..+|++|||++++.|+++++++.
T Consensus 333 ~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~ 374 (379)
T TIGR03402 333 RAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLR 374 (379)
T ss_pred HHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 24699999999999999999999999887654
No 125
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.86 E-value=4.8e-19 Score=183.79 Aligned_cols=346 Identities=14% Similarity=0.110 Sum_probs=210.0
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhcCc-CCC-CeEEEeCChhHHH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFTA-SKM-AKVFFTNSGSEAN 175 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~~~-~~~-~~v~~~~sGseA~ 175 (514)
++..+||..|.. ..++ .+|.+.+++.+.+.... ..+....+..+....+++.+.+.++. ... ++|++++|+++|+
T Consensus 38 ~~~~i~l~~g~~-~~~~-p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al 115 (405)
T PRK06207 38 PGRPVDFSHGDV-DAHE-PTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGAL 115 (405)
T ss_pred CCCceecCCcCC-CCCC-CCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHH
Confidence 356678776543 2233 56789999888876532 11222223445566677777766532 244 7899999999999
Q ss_pred HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250 176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255 (514)
Q Consensus 176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (514)
..+++... ..++.|++.+++|.+........+. ........ . .+....|. .
T Consensus 116 ~~~~~~l~--------~~Gd~Vlv~~P~y~~~~~~~~~~g~-~v~~v~~~----~---~~~~~~~~-------------~ 166 (405)
T PRK06207 116 FLAVAATV--------ARGDKVAIVQPDYFANRKLVEFFEG-EMVPVQLD----Y---LSADKRAG-------------L 166 (405)
T ss_pred HHHHHHhc--------CCCCEEEEeCCCchhHHHHHHHcCC-EEEEEecc----c---cCcccCCC-------------c
Confidence 99988663 3457899999999876432222211 11000000 0 00000011 1
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eecccCCCCc
Q 010250 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYSIKPD 334 (514)
Q Consensus 256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~gv~pD 334 (514)
++++|++.+.. +..+.+++.| ++.+|.+. +.+.+++|.++|++||+++|+||+|..|-..|... ....+...+|
T Consensus 167 d~~~l~~~~~~---~~k~v~l~~P-~NPTG~~~-s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~ 241 (405)
T PRK06207 167 DLDQLEEAFKA---GVRVFLFSNP-NNPAGVVY-SAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPE 241 (405)
T ss_pred CHHHHHHhhhh---cCeEEEECCC-CCCCCcCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcC
Confidence 24667776642 2334556666 45556554 56789999999999999999999999774444321 1111222233
Q ss_pred -hh---chhhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--hccHHHHHHHH
Q 010250 335 -LV---SFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKI 407 (514)
Q Consensus 335 -iv---~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~~~~~~~~~~~ 407 (514)
++ +|||.++ .| +++|++++++++++.+... ......+.+.+++.++.++|+.-. -++..+..+++
T Consensus 242 ~vi~i~SfSK~~~lpG-lRiG~ii~~~~l~~~~~~~-------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~ 313 (405)
T PRK06207 242 NVITIMGPSKTESLSG-YRLGVAFGSPAIIDRMEKL-------QAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAI 313 (405)
T ss_pred cEEEEecchhhccCcc-cceEEEEcCHHHHHHHHHH-------HhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 22 6899887 45 8999999999998888642 111233445566676666664210 01234445555
Q ss_pred HHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEEE
Q 010250 408 APKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMM 478 (514)
Q Consensus 408 ~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iRi 478 (514)
.+.+.+.|+++ +.+..... -|.++++++..... ....+...|+ ++||.+.++ .+++||
T Consensus 314 r~~l~~~L~~~---~~~~~~~p~gg~fl~~~l~~~~~----------~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ri 380 (405)
T PRK06207 314 RDDLLRVLRGV---EGVFVRAPQAGSYLFPRLPRLAV----------SLHDFVKILRLQAGVIVTPGTEFSPHTADSIRL 380 (405)
T ss_pred HHHHHHHHhcC---CCceecCCCeeEEEEEeCcccCC----------CHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEE
Confidence 66666666544 22222223 36788888753210 1345777886 689999874 246999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 479 SPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 479 ~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+ +..+++++++++++|.+++++.
T Consensus 381 s--~~~~~~~l~~al~rl~~~l~~~ 403 (405)
T PRK06207 381 N--FSQDHAAAVAAAERIAQLIERY 403 (405)
T ss_pred E--ecCCHHHHHHHHHHHHHHHHHh
Confidence 9 5668999999999999988654
No 126
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.86 E-value=1e-19 Score=188.74 Aligned_cols=341 Identities=14% Similarity=0.125 Sum_probs=209.9
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-c--cccc--cCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-H--SFWN--RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE 173 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~--~~~~--~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse 173 (514)
+..|||..+. |.-++.+++++.+.+...... + .... ...+...++.+.++++++....++|+|++|+++
T Consensus 16 ~~iyld~a~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~ 89 (398)
T TIGR03392 16 GTVYLDSAAT------ALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTE 89 (398)
T ss_pred CeEEeeCccc------cCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHH
Confidence 5689996543 446789999998887532111 0 0000 012334567788888885434578999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChh
Q 010250 174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 250 (514)
Q Consensus 174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (514)
++..++...... .-.++++||+.++.|++..... ....|... ..++.+..+
T Consensus 90 ~l~~~~~~~~~~----~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v------------~~v~~~~~~---------- 143 (398)
T TIGR03392 90 SINLVAQSYARP----RLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKV------------VKLPIGADL---------- 143 (398)
T ss_pred HHHHHHHHhhhc----cCCCCCEEEECCcchhHHHHHHHHHHHHcCcEE------------EEEecCCCC----------
Confidence 999998765210 0023468899888887632111 11111111 111111100
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccC
Q 010250 251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS 330 (514)
Q Consensus 251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~g 330 (514)
..+.+++++++. +++.+|++..+++.+|.+.| +++|.++|++||+++|+|++|+ +|.. ..+...
T Consensus 144 ---~~~~~~l~~~i~----~~t~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~~~----~~~~~~ 207 (398)
T TIGR03392 144 ---LPDIRQLPELLT----PRTRILALGQMSNVTGGCPD----LARAITLAHQYGAVVVVDGAQG-VVHG----PPDVQA 207 (398)
T ss_pred ---CcCHHHHHHHhc----cCceEEEEECccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCC----CCChhh
Confidence 011467777664 34667777778888898887 8999999999999999999996 4332 122223
Q ss_pred CCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCc--------c-----cccC-CCCCcHHHHHHHHHHHHH
Q 010250 331 IKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGS--------F-----SHGF-TYSGHPVSCAVAIEALKI 394 (514)
Q Consensus 331 v~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~--------~-----~~~~-t~~~~pl~~aaa~aal~~ 394 (514)
..+|+.++| |.++ . ..+|++++++++++.+.+....... + .... .-..+..+.++..++++.
T Consensus 208 ~~~d~~~~s~~K~~g-p-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~ 285 (398)
T TIGR03392 208 LDIDFYAFSGHKLYG-P-TGIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEW 285 (398)
T ss_pred cCCCEEEEecccccC-C-CceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHH
Confidence 457888888 9554 2 3589999999988776431100000 0 0000 012334466666677777
Q ss_pred Hhhc---cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe
Q 010250 395 YKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV 471 (514)
Q Consensus 395 ~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~ 471 (514)
+.+. ++.++..++.+++++.|+++....+.. ...+.++.+.+.... ...+...|.++||.++.
T Consensus 286 l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~--~~~~~i~~~~~~~~~------------~~~l~~~L~~~gI~v~~ 351 (398)
T TIGR03392 286 LTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFR--CPGSSLLAFDFAGVH------------HSDLAALLAESGIALRA 351 (398)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeC--CCCCcEEEEEeCCcC------------HHHHHHHHHhCCEEEec
Confidence 6543 355677777788888777652211111 112345555553211 34577888999999975
Q ss_pred e-------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 472 S-------------GDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 472 ~-------------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+ ++.||+++...+|++||+++++.|+++++++
T Consensus 352 g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 352 GQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred CccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHHHh
Confidence 3 2479999999999999999999999987653
No 127
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.86 E-value=8.1e-20 Score=186.95 Aligned_cols=320 Identities=16% Similarity=0.142 Sum_probs=196.3
Q ss_pred CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEE-eCChhHHH
Q 010250 97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFF-TNSGSEAN 175 (514)
Q Consensus 97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~-~~sGseA~ 175 (514)
.+++.++||.+|. +++| .+|.+++++.+.+.....| +.....++.+.++++++ ...+++++ +++.++++
T Consensus 31 ~~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~y------~~~~~~~lr~~ia~~~~-~~~~~i~~~~~Ga~~~i 100 (361)
T PRK00950 31 IDPESIIKLGSNE--NPLG-PSPKAVEAIEKELSKIHRY------PEPDAPELREALSKYTG-VPVENIIVGGDGMDEVI 100 (361)
T ss_pred CCccceEEccCCC--CCCC-CCHHHHHHHHHHHHhhcCC------CCCCHHHHHHHHHHHhC-CCHHHEEEeCCCHHHHH
Confidence 4677899998774 4577 5789999998877653222 22234778888988873 34578888 56667788
Q ss_pred HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250 176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255 (514)
Q Consensus 176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (514)
..+++... .+++.|++.+++|......... .|.... .++.++.|. .
T Consensus 101 ~~~~~~~~--------~~gd~vlv~~p~y~~~~~~~~~-~g~~~~------------~~~~~~~~~-------------~ 146 (361)
T PRK00950 101 DTLMRTFI--------DPGDEVIIPTPTFSYYEISAKA-HGAKPV------------YAKREEDFS-------------L 146 (361)
T ss_pred HHHHHHhc--------CCCCEEEEcCCChHHHHHHHHH-cCCEEE------------EeecCCCCC-------------c
Confidence 88777652 2346788888888665322211 121110 011111111 1
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-ecccCCCCc
Q 010250 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYSIKPD 334 (514)
Q Consensus 256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~~gv~pD 334 (514)
+++++++.+. .++.++++...++++|.+.+ .+++.++|+++|+++|+||+|.+|. .+.... ...++-.--
T Consensus 147 ~~~~l~~~~~----~~~~~v~~~~p~nptG~~~~----~~~l~~l~~~~~~~li~De~y~~~~-~~~~~~~~~~~~~vi~ 217 (361)
T PRK00950 147 DVDSVLNAIT----EKTKVIFLCTPNNPTGNLIP----EEDIRKILESTDALVFVDEAYVEFA-EYDYTPLALEYDNLII 217 (361)
T ss_pred CHHHHHHHhc----cCCCEEEEeCCCCCCCCCcC----HHHHHHHHHHCCcEEEEECchhhhC-ccchHHHHHhcCCEEE
Confidence 1456666553 23444444444677788877 7889999999999999999998773 111111 111110011
Q ss_pred hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHh
Q 010250 335 LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQD 413 (514)
Q Consensus 335 iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~ 413 (514)
+-+|||.++..++++|++++++++++.+... ..+++.++++++++.++++..+. ++..++++++.+++.+
T Consensus 218 ~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~ 288 (361)
T PRK00950 218 GRTFSKVFGLAGLRIGYGFVPEWLIDYYMRA---------KTPFSLTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYN 288 (361)
T ss_pred EEeehHhhcCchhhcchhcCCHHHHHHHHHh---------cCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh
Confidence 2278999984338999999999998888632 12345667777777777652110 1223344444444444
Q ss_pred hhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------CCEEEEeCCCCCCH
Q 010250 414 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------GDNIMMSPPFIMSP 486 (514)
Q Consensus 414 ~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------g~~iRi~p~~~~t~ 486 (514)
.|. + . .....|.++++.+.. . ....+++.|.++||.+.++ .+.||++. .++
T Consensus 289 ~l~-~---~---~~~~~~~~i~~~~~~-~-----------~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~---~~~ 346 (361)
T PRK00950 289 ELP-F---K---VYPSEANFVLVDVTP-M-----------TAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSI---GTF 346 (361)
T ss_pred hcC-e---e---ECCCcceEEEEECCC-C-----------CHHHHHHHHHHCCEEEeeCCccCCCCCCeEEEEC---CCH
Confidence 443 1 1 112345666776621 1 1456888999999999863 24699993 388
Q ss_pred HHHHHHHHHHHHHH
Q 010250 487 EEVDELISKYGKAL 500 (514)
Q Consensus 487 e~id~~~~~l~~~l 500 (514)
+++++++++|++++
T Consensus 347 ~~~~~l~~~L~~il 360 (361)
T PRK00950 347 EENERFLEILKEIV 360 (361)
T ss_pred HHHHHHHHHHHHHh
Confidence 89999999998875
No 128
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.86 E-value=7.2e-20 Score=185.52 Aligned_cols=322 Identities=18% Similarity=0.167 Sum_probs=198.7
Q ss_pred EccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHH
Q 010250 104 DSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVW 183 (514)
Q Consensus 104 D~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~ 183 (514)
||.|. +++| .+|++++++.+.+.... . .++.+...++++.++++++ .+.++++++|++|+..+++..+
T Consensus 1 ~~~~~---~~~~-~~~~v~~a~~~~~~~~~----~-~~~~~~~~~l~~~~a~~~g---~~~~~~~~~gt~a~~~~~~~l~ 68 (338)
T cd06502 1 DFRSD---TVTG-PTPEMLEAMAAANVGDD----V-YGEDPTTAKLEARAAELFG---KEAALFVPSGTAANQLALAAHT 68 (338)
T ss_pred Ccccc---cCCC-CCHHHHHHHHhcccCCc----c-cCCCHHHHHHHHHHHHHhC---CCeEEEecCchHHHHHHHHHhc
Confidence 67777 7788 78999999988653221 1 1244567899999999884 4678999999999999988764
Q ss_pred HHHhhcCCCCccEEEEEecCCcccceee---eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHH
Q 010250 184 YYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 260 (514)
Q Consensus 184 ~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 260 (514)
.+++.|++.++ +|.+.... ....|.... .++... + ..+.+++
T Consensus 69 --------~~gd~v~~~~~-~~~~~~~~~~~~~~~g~~~~------------~v~~~~-~-------------~~d~~~l 113 (338)
T cd06502 69 --------QPGGSVICHET-AHIYTDEAGAPEFLSGVKLL------------PVPGEN-G-------------KLTPEDL 113 (338)
T ss_pred --------CCCCeEEEecC-cceeeecCCcHHHHcCceEE------------eecCCC-C-------------cCCHHHH
Confidence 33456665554 44432211 111121110 111100 0 1125777
Q ss_pred HHHHHHhC---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc--ccccccceecccCCCCch
Q 010250 261 EDLILKEG---PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF--GRLGTMFGCDKYSIKPDL 335 (514)
Q Consensus 261 e~li~~~~---~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~--gr~G~~~~~~~~gv~pDi 335 (514)
++++.+.. ..++++|+++..++.||.+ +.+.+++|.++|++||+++|+||+|..+ +..|. ....+...+|+
T Consensus 114 ~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~--~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~--~~~~~~~~~d~ 189 (338)
T cd06502 114 EAAIRPRDDIHFPPPSLVSLENTTEGGTVY--PLDELKAISALAKENGLPLHLDGARLANAAAALGV--ALKTYKSGVDS 189 (338)
T ss_pred HHHhhccCCCcCCcceEEEEEeecCCcccc--CHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCC--CHHHHHhcCCE
Confidence 77775311 1245677777666666544 6678999999999999999999987411 11121 11222234566
Q ss_pred h--chhhhhcCCccccee-EEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 010250 336 V--SFAKALSSAYMPIGA-ILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQ 412 (514)
Q Consensus 336 v--~~sK~l~gG~~pig~-v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~ 412 (514)
+ +++|.++. |.|+ +++++++++.+.... ..+++++..+++.++++.++|+.-...+..+++.++.+++.
T Consensus 190 ~~~s~sK~~~~---~~g~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~ 261 (338)
T cd06502 190 VSFCLSKGGGA---PVGAVVVGNRDFIARARRRR-----KQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLA 261 (338)
T ss_pred EEEeccccCCC---ccceEEECCHHHHHHHHHHH-----HHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 5 57798864 3354 457888888876421 12335566677777888877763222345677888888999
Q ss_pred hhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH---HCCcEEEeeC-CEEEEeCCCCCCHHH
Q 010250 413 DGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE---KHGMLVRVSG-DNIMMSPPFIMSPEE 488 (514)
Q Consensus 413 ~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~Gv~~~~~g-~~iRi~p~~~~t~e~ 488 (514)
+.|+++. .. .....+.+..+.+.... .....+.+.+. ++|+++.+.+ +.|||+|++.+|++|
T Consensus 262 ~~L~~~~-~~---~~~~~~~~~~v~~~~~~----------~~~~~l~~~l~~~~~~gi~~~~~~~~~lRi~~~~~~~~~~ 327 (338)
T cd06502 262 EALEELG-GL---ESEVQTNIVLLDPVEAN----------AVFVELSKEAIERRGEGVLFYAWGEGGVRFVTHWDTTEED 327 (338)
T ss_pred HHHHhcC-CC---cccccCCeEEEecCCcc----------HHHHHHHHHHHHhhhCCEEEEecCCCeEEEEeecCCCHHH
Confidence 9998762 11 11123334444432111 12233444443 6899998764 679999999999999
Q ss_pred HHHHHHHHHH
Q 010250 489 VDELISKYGK 498 (514)
Q Consensus 489 id~~~~~l~~ 498 (514)
++++++++++
T Consensus 328 i~~~~~~l~~ 337 (338)
T cd06502 328 VDELLSALKA 337 (338)
T ss_pred HHHHHHHHhc
Confidence 9999998865
No 129
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=9.4e-20 Score=186.88 Aligned_cols=325 Identities=16% Similarity=0.161 Sum_probs=202.4
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV 179 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al 179 (514)
+.++++..|. +.+| .+|++++++.+.+.....| . .....+|.+.|++++. .+.++|++++|+++++..++
T Consensus 32 ~~~~~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~Y----~--~~~~~~Lr~~ia~~~~-~~~~~I~it~G~~~~l~~~~ 101 (369)
T PRK08153 32 PFRARIGANE--SGFG-PSPSVIAAMREAAAEIWKY----G--DPENHDLRHALAAHHG-VAPENIMVGEGIDGLLGLIV 101 (369)
T ss_pred cceeEecCCC--CCCC-CCHHHHHHHHHHHHHhhcC----C--CCccHHHHHHHHHHhC-CCHHHEEEcCCHHHHHHHHH
Confidence 3567887663 3455 6889999998876542222 1 1125678888988873 45578999999999999988
Q ss_pred HHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250 180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259 (514)
Q Consensus 180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (514)
.+.. ..++.|++.+++|.+........+.. . ..+++.. .. .++++
T Consensus 102 ~~~~--------~~gd~vlv~~p~y~~~~~~~~~~g~~-~------------~~vp~~~------~~--------~~~~~ 146 (369)
T PRK08153 102 RLYV--------EPGDPVVTSLGAYPTFNYHVAGFGGR-L------------VTVPYRD------DR--------EDLDA 146 (369)
T ss_pred HHhc--------CCCCEEEECCCcchHHHHHHHHcCCe-E------------EEeeCCC------CC--------CCHHH
Confidence 8653 33568888899987754222211111 0 0111100 00 01233
Q ss_pred HHHHHHHhCCCcEE-EEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh--
Q 010250 260 LEDLILKEGPETIA-AFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV-- 336 (514)
Q Consensus 260 le~li~~~~~~~~a-avivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv-- 336 (514)
+++... ..++. .++++|.+++ |.+. +.+.+++|.++|++ |++||+||++..|+..|...... ...|+++
T Consensus 147 l~~~~~---~~~~~~i~l~~P~NPt-G~~~-~~~~l~~l~~~~~~-~~~lI~DE~y~~~~~~~~~~~~~--~~~~~~i~~ 218 (369)
T PRK08153 147 LLDAAR---RENAPLVYLANPDNPM-GSWH-PAADIVAFIEALPE-TTLLVLDEAYCETAPAGAAPPID--TDDPNVIRM 218 (369)
T ss_pred HHHHhc---ccCCcEEEEeCCCCCC-CCCC-CHHHHHHHHHhCCC-CcEEEEeCchhhhcCcccchhhh--hcCCCEEEE
Confidence 333222 12333 4455775555 6655 45667777777764 99999999999886544321111 1234433
Q ss_pred -chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhh
Q 010250 337 -SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDG 414 (514)
Q Consensus 337 -~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~ 414 (514)
+|||.++.+++++|++++++++++.+... ..+++.+++++.++.++|+.-+ -+.+.+.++++.+++.+.
T Consensus 219 ~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~---------~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~ 289 (369)
T PRK08153 219 RTFSKAYGLAGARVGYAIGAPGTIKAFDKV---------RNHFGMNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAI 289 (369)
T ss_pred ecchHhccCcchheeeeecCHHHHHHHHHh---------hcCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 79999873339999999999999888642 1246778999999988885211 122344555566666666
Q ss_pred hhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE-ee----CCEEEEeCCCCCCHHHH
Q 010250 415 VKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR-VS----GDNIMMSPPFIMSPEEV 489 (514)
Q Consensus 415 L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~-~~----g~~iRi~p~~~~t~e~i 489 (514)
|++. ++ ......|.++.+++.... ..+..+.++|.++||.++ +. .+.+|++ ..+++++
T Consensus 290 L~~~---g~-~~~p~~~~f~~~~~~~~~----------~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis---~~~~~~~ 352 (369)
T PRK08153 290 ARAN---GL-TPLPSATNFVAIDCGRDG----------AFARAVLDGLIARDIFVRMPGVAPLDRCIRVS---CGPDEEL 352 (369)
T ss_pred HHHC---CC-ccCCCcCcEEEEECCCCc----------ccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEe---cCCHHHH
Confidence 6543 22 122344666666653211 125668889999999996 32 2469999 3489999
Q ss_pred HHHHHHHHHHHHHH
Q 010250 490 DELISKYGKALKAT 503 (514)
Q Consensus 490 d~~~~~l~~~l~~~ 503 (514)
+.++++|++++...
T Consensus 353 ~~~~~al~~~~~~~ 366 (369)
T PRK08153 353 DLFAEALPEALEAA 366 (369)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999888644
No 130
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.86 E-value=4.8e-20 Score=188.54 Aligned_cols=326 Identities=12% Similarity=0.151 Sum_probs=212.0
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT 177 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~ 177 (514)
+++..+|+..|- +++| .+|++++++.+.+.....| +.....+|.+.|+++++ .+.++|++++|++|++..
T Consensus 27 ~~~~~i~l~~ne--n~~~-~~~~v~~a~~~~~~~~~~Y------p~~g~~~Lr~aia~~~~-~~~~~I~vt~Gs~e~i~~ 96 (366)
T PRK01533 27 GDHSFVKLASNE--NPFG-CSPRVLDELQKSWLDHALY------PDGGATTLRQTIANKLH-VKMEQVLCGSGLDEVIQI 96 (366)
T ss_pred CCCceEEeCCCC--CCCC-CCHHHHHHHHHHHHhcCcC------CCCCHHHHHHHHHHHhC-CCcceEEECCCHHHHHHH
Confidence 356789987764 5677 6788999998876553322 22334678888888874 456899999999999999
Q ss_pred HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
+++... ..++.|++.+++|.+....+... |... ..++.. .+. .++
T Consensus 97 ~~~~l~--------~~gd~vlv~~P~y~~~~~~~~~~-g~~v------------~~v~~~-~~~-------------~d~ 141 (366)
T PRK01533 97 ISRAVL--------KAGDNIVTAGATFPQYRHHAIIE-GCEV------------KEVALN-NGV-------------YDL 141 (366)
T ss_pred HHHHhc--------CCCCEEEEcCCcHHHHHHHHHHc-CCEE------------EEeecC-CCC-------------cCH
Confidence 988763 23468999999998765433221 1111 011110 000 124
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-ceecccCCCCchh
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGCDKYSIKPDLV 336 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~~~~gv~pDiv 336 (514)
+++++.+. ++....+++.| ++++|.+. +.+.+++|.++|++++ ++|+||+|..|-..+.. -......-.+.++
T Consensus 142 ~~l~~~~~---~~~~~v~i~~P-~NPTG~~~-~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi 215 (366)
T PRK01533 142 DEISSVVD---NDTKIVWICNP-NNPTGTYV-NDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNIL 215 (366)
T ss_pred HHHHHHhC---cCCcEEEEeCC-CCCCCCCc-CHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEE
Confidence 66666553 22334455555 66667665 5577888888898876 57779999876332211 0111111123333
Q ss_pred ---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHH
Q 010250 337 ---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQ 412 (514)
Q Consensus 337 ---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~ 412 (514)
+|||.++..++++|++++++++++.+... . .+++.+.+++.++.++|+.-+ .+.+.+..++..+++.
T Consensus 216 ~~~SfSK~~~l~GlRiG~~i~~~~~~~~l~~~-------~--~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~ 286 (366)
T PRK01533 216 VLRTFSKAYGLASFRVGYAVGHEELIEKLNVV-------R--LPFNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYE 286 (366)
T ss_pred EEeCchHHhcChHHHHhHHhCCHHHHHHHHHh-------c--CCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 68998874339999999999999988641 1 357788899999888885211 1223444555555666
Q ss_pred hhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHH
Q 010250 413 DGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDEL 492 (514)
Q Consensus 413 ~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~ 492 (514)
+.++.+ ..+ .....|.++.+.+.+ ...+...|+++||.+++..++||++ ..+.++.+++
T Consensus 287 ~~l~~~-g~~---~~~~~~nf~~~~~~~--------------~~~~~~~l~~~GI~Vr~~~~~iRis---~~~~~~~~~l 345 (366)
T PRK01533 287 SFCKEN-EIP---FYQSQTNFIFLPVEN--------------GGEIYEACAHAGFIIRPFPNGVRIT---VGTREQNEGV 345 (366)
T ss_pred HHHHhC-CCc---cCCCcCcEEEEeCCC--------------HHHHHHHHHHCCcEEccCCCceEEe---CCCHHHHHHH
Confidence 666554 211 223467777777631 2357789999999999887889999 7899999999
Q ss_pred HHHHHHHHHHHH
Q 010250 493 ISKYGKALKATE 504 (514)
Q Consensus 493 ~~~l~~~l~~~~ 504 (514)
+++|+++++..+
T Consensus 346 ~~al~~~~~~~~ 357 (366)
T PRK01533 346 ISVLQQHFENKK 357 (366)
T ss_pred HHHHHHHHHhcc
Confidence 999998876544
No 131
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.86 E-value=1.2e-19 Score=184.31 Aligned_cols=293 Identities=16% Similarity=0.145 Sum_probs=190.1
Q ss_pred hHHHHHHHHHHhcCc-----CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcc
Q 010250 145 PSLDLAKELLEMFTA-----SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPA 219 (514)
Q Consensus 145 ~~~ela~~L~~~~~~-----~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~ 219 (514)
...++.+.+++++.. .+.+.++++++|++|+..+++.+. ..+++|++.+++|++...........
T Consensus 37 ~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~--------~~g~~vl~~~~~~~~~~~~~~~~~~~-- 106 (350)
T cd00609 37 GLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL--------NPGDEVLVPDPTYPGYEAAARLAGAE-- 106 (350)
T ss_pred CcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC--------CCCCEEEEcCCCchhHHHHHHHCCCE--
Confidence 334455555555421 135689999999999999998773 23567888888877654322221111
Q ss_pred ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHH
Q 010250 220 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA 299 (514)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~ 299 (514)
+..++...... .. . . .++++.++ .+++++|++++.++++|.+. +.+.+++|.+
T Consensus 107 -----------~~~i~~~~~~~-----~~-~-~----~~~~~~~~----~~~~~~v~i~~~~~~tG~~~-~~~~l~~l~~ 159 (350)
T cd00609 107 -----------VVPVPLDEEGG-----FL-L-D----LELLEAAK----TPKTKLLYLNNPNNPTGAVL-SEEELEELAE 159 (350)
T ss_pred -----------EEEEecccccC-----Cc-c-C----HHHHHhhc----CccceEEEEECCCCCCCccc-CHHHHHHHHH
Confidence 01111110000 00 0 0 12222222 35788999999888889765 5678899999
Q ss_pred HHHhcCCEEEEechhcCcccccccce--ecccCCCCchh--chhhhhc-CCcccceeEEeCH-HHHHHhhhccCCCCccc
Q 010250 300 VVKKYDILFIADEVICAFGRLGTMFG--CDKYSIKPDLV--SFAKALS-SAYMPIGAILVSP-EVSEVIHSQSNTLGSFS 373 (514)
Q Consensus 300 l~~~~gillI~DEv~tG~gr~G~~~~--~~~~gv~pDiv--~~sK~l~-gG~~pig~v~~~~-~i~~~l~~~~~~~~~~~ 373 (514)
+|+++|+++|+||++++++..+.... ........|++ +++|.++ +| .++|++++++ ++++.+... .
T Consensus 160 ~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g-~~~G~i~~~~~~~~~~~~~~-------~ 231 (350)
T cd00609 160 LAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPG-LRIGYLIAPPEELLERLKKL-------L 231 (350)
T ss_pred HHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcc-cceEEEecCHHHHHHHHHHH-------H
Confidence 99999999999999998766554321 11111122443 6889998 55 7999999999 788888642 2
Q ss_pred ccCCCCCcHHHHHHHHHHHHHH--hhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCc
Q 010250 374 HGFTYSGHPVSCAVAIEALKIY--KERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPE 451 (514)
Q Consensus 374 ~~~t~~~~pl~~aaa~aal~~~--~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~ 451 (514)
...++..++.++.++.++++.. ..+...+++.++.+++++.|++...... .....|.+..+.+....
T Consensus 232 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~~~g~~~~~~~~~~~--------- 300 (350)
T cd00609 232 PYTTSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVV--VKPSGGFFLWLDLPEGD--------- 300 (350)
T ss_pred HhcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCccc--cCCCccEEEEEecCCCC---------
Confidence 2335667788888888888765 2245677888889999999987621111 23345667777665321
Q ss_pred cchHHHHHHHHHHCCcEEEee-------CCEEEEeCCCCCCHHHHHHHHHHHH
Q 010250 452 WGIGAYFGAQCEKHGMLVRVS-------GDNIMMSPPFIMSPEEVDELISKYG 497 (514)
Q Consensus 452 ~~~~~~~~~~l~~~Gv~~~~~-------g~~iRi~p~~~~t~e~id~~~~~l~ 497 (514)
....+.+.|.+.|+.+.+. +..||++++.. ++||++++++|+
T Consensus 301 --~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 301 --DEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred --hHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 1344667777889998864 35799998766 999999999886
No 132
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.85 E-value=2.8e-19 Score=185.67 Aligned_cols=340 Identities=14% Similarity=0.107 Sum_probs=210.1
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-ccc----cccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSF----WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE 173 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~~~----~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse 173 (514)
+..|||..+. |.-++.+.+++.+.++..... ++. .....+...++.+.++++++..+.+.|+|++|+++
T Consensus 19 ~~~yld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~ 92 (401)
T PRK10874 19 AGVYLDSAAT------ALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTE 92 (401)
T ss_pred ceEEEeCCcc------cCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHH
Confidence 5679996543 446788999998887642111 110 01123445677888998885435678999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChh
Q 010250 174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 250 (514)
Q Consensus 174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (514)
++..+++..... .-+++++||+.++.|++..... ....|... ..++.+..+
T Consensus 93 ~i~~~~~~~~~~----~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v------------~~v~~~~~~---------- 146 (401)
T PRK10874 93 SINLVAQSYARP----RLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKV------------VKLPLGADR---------- 146 (401)
T ss_pred HHHHHHHHhhhc----cCCCcCEEEECCcchHHHHHHHHHHHHHhCCEE------------EEEecCCCC----------
Confidence 999998765210 0023468999888887631111 11111111 111111100
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccC
Q 010250 251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS 330 (514)
Q Consensus 251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~g 330 (514)
..+++++++.+. +++.+|++..+++.+|.+.| +++|.++|+++|+++|+|++|+ +|.. ..+...
T Consensus 147 ---~~d~~~l~~~i~----~~t~lv~i~~~~n~tG~~~~----~~~i~~l~~~~g~~~ivD~a~~-~g~~----~~~~~~ 210 (401)
T PRK10874 147 ---LPDVDLLPELIT----PRTRILALGQMSNVTGGCPD----LARAITLAHQAGMVVMVDGAQG-AVHF----PADVQA 210 (401)
T ss_pred ---cCCHHHHHHhcC----cCcEEEEEeCCcccccCcCC----HHHHHHHHHHcCCEEEEECCcc-cccc----cCCchh
Confidence 011466776663 35667777778888898887 8999999999999999999996 4433 122223
Q ss_pred CCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCc-------------ccccCC-CCCcHHHHHHHHHHHHH
Q 010250 331 IKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGS-------------FSHGFT-YSGHPVSCAVAIEALKI 394 (514)
Q Consensus 331 v~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~-------------~~~~~t-~~~~pl~~aaa~aal~~ 394 (514)
+.+|++++| |.++ . ..+|++++++++++.+.+....... ...... -+.|..+.++..++++.
T Consensus 211 ~~~d~~~~s~~K~~g-p-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~ 288 (401)
T PRK10874 211 LDIDFYAFSGHKLYG-P-TGIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEW 288 (401)
T ss_pred cCCCEEEEecccccC-C-CccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHH
Confidence 347877665 9553 2 3479999999988876431100000 000000 12344566666667776
Q ss_pred Hhhc---cHHHHHHHHHHHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE
Q 010250 395 YKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR 470 (514)
Q Consensus 395 ~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~ 470 (514)
+.+. +..++.+++.+++++.|+++. .+... ...+.++.+.+.... ...+.+.|.++||.++
T Consensus 289 l~~~g~~~~~~~~~~l~~~l~~~l~~~~---g~~~~~~~~~~i~~~~~~~~~------------~~~~~~~L~~~gI~v~ 353 (401)
T PRK10874 289 LADIDINQAESWSRSLATLAEDALAKLP---GFRSFRCQDSSLLAFDFAGVH------------HSDLVTLLAEYGIALR 353 (401)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHhcCC---CEEEeCCCCCcEEEEEECCcC------------HHHHHHHHHHCCcEEe
Confidence 6543 356777777888888887652 22111 122345555553211 3457788889999987
Q ss_pred ee-------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 471 VS-------------GDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 471 ~~-------------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
++ .+.||+++...+|++||+++++.|+++++.+
T Consensus 354 ~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 354 AGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred ccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHHh
Confidence 52 2469999999999999999999999988754
No 133
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.85 E-value=2.3e-19 Score=186.47 Aligned_cols=340 Identities=14% Similarity=0.092 Sum_probs=211.0
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc-ccc-c---cccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHS-F---WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE 173 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~-~~~-~---~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse 173 (514)
+..|||..+. |..++.+++++.+.+..... .++ . .....+...++.+.|+++++..+.++|+|++|+++
T Consensus 23 ~~iYld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 96 (406)
T PRK09295 23 PLAYLDSAAS------AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTE 96 (406)
T ss_pred ceEEEeCccc------ccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHH
Confidence 4589997654 34678899999888864221 100 0 01123445677788888885434578999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee---cCCCccccCCCCCCCCcccccCCCCcccCCCCCCChh
Q 010250 174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS---LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 250 (514)
Q Consensus 174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~---~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (514)
++..+++..... .. .++++||+.+..||+....... ..|.. +..++.+..++
T Consensus 97 ~l~~~~~~~~~~---~~-~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~------------v~~v~~~~~~~--------- 151 (406)
T PRK09295 97 GINLVANSWGNS---NV-RAGDNIIISEMEHHANIVPWQMLCARVGAE------------LRVIPLNPDGT--------- 151 (406)
T ss_pred HHHHHHHHhhhh---cC-CCcCEEEECcchhhHHHHHHHHHHHHcCcE------------EEEEecCCCCC---------
Confidence 999888754110 01 2346788888777664211110 11111 11111111100
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccC
Q 010250 251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS 330 (514)
Q Consensus 251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~g 330 (514)
.+.++|++++. +++.+|++..+++.+|.+.| +++|.++|+++|+++|+|++|+ +|.. ..... .
T Consensus 152 ----~d~~~l~~~i~----~~t~lv~l~~~~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~--~~~~~--~ 214 (406)
T PRK09295 152 ----LQLETLPALFD----ERTRLLAITHVSNVLGTENP----LAEMIALAHQHGAKVLVDGAQA-VMHH--PVDVQ--A 214 (406)
T ss_pred ----CCHHHHHHhcC----CCcEEEEEecchhcccccCC----HHHHHHHHHHcCCEEEEEcccc-cCcc--ccCch--h
Confidence 11466776664 35677888888888999987 9999999999999999999996 5433 12222 3
Q ss_pred CCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCc-----cccc----------CCCCCcHHHHHHHHHHHH
Q 010250 331 IKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGS-----FSHG----------FTYSGHPVSCAVAIEALK 393 (514)
Q Consensus 331 v~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~-----~~~~----------~t~~~~pl~~aaa~aal~ 393 (514)
..+|++++| |.+ |+ ..+|++++++++++.+.+.....+. .... .+-+.|..+..+..++++
T Consensus 215 ~~~D~~~~s~~K~~-gp-~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~ 292 (406)
T PRK09295 215 LDCDFYVFSGHKLY-GP-TGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALD 292 (406)
T ss_pred cCCCEEEeehhhcc-CC-CCcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHH
Confidence 346887665 944 43 3589999999987766421000000 0000 011345667777788888
Q ss_pred HHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE
Q 010250 394 IYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR 470 (514)
Q Consensus 394 ~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~ 470 (514)
.+.+ +.+.++.+++.++++++|+++....+.... ..+.++.+.+.... ...+...|.++||.++
T Consensus 293 ~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~-~~~~iv~~~~~~~~------------~~~~~~~L~~~gI~v~ 359 (406)
T PRK09295 293 YVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQ-NRLGVIAFNLGKHH------------AYDVGSFLDNYGIAVR 359 (406)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC-CCceEEEEEECCcC------------HHHHHHHHHhCCeEEe
Confidence 8765 345677888888888888765322222211 12345566554211 3346678889999987
Q ss_pred eeC-------------CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 471 VSG-------------DNIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 471 ~~g-------------~~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
.+. ..||++|....|++|||.+++.|++...
T Consensus 360 ~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 360 TGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred ccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 431 3699999999999999999999987643
No 134
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.85 E-value=9.5e-19 Score=181.16 Aligned_cols=340 Identities=14% Similarity=0.135 Sum_probs=204.5
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc----C-cCCCCeEEEeCChhH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----T-ASKMAKVFFTNSGSE 173 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~----~-~~~~~~v~~~~sGse 173 (514)
+..++||..|... ++ .+|.+.+++.+.+......+. +.....+|.+.|++++ + ....+++++++|+++
T Consensus 30 ~~~~~~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~Y~----~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~ 102 (393)
T PRK05764 30 GRDVISLGAGEPD--FD-TPEHIKEAAIEALDDGKTKYT----PAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQ 102 (393)
T ss_pred cCCEEEeCCCCCC--CC-CCHHHHHHHHHHHhcCCCCcC----CCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHH
Confidence 4568898887532 33 578999999888764321111 1122344445554443 2 224478999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCChhH
Q 010250 174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEE 251 (514)
Q Consensus 174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 251 (514)
|+..++..+. ..++.|++.+++|.+....... .|.... .++.. ..|.
T Consensus 103 a~~~~~~~~~--------~~gd~vl~~~p~y~~~~~~~~~-~g~~~~------------~~~~~~~~~~~---------- 151 (393)
T PRK05764 103 ALYNAFMALL--------DPGDEVIIPAPYWVSYPEMVKL-AGGVPV------------FVPTGEENGFK---------- 151 (393)
T ss_pred HHHHHHHHhc--------CCCCEEEecCCCCcchHHHHHH-cCCEEE------------EEecCcccCCc----------
Confidence 9999887653 3346799999988775332222 121110 01110 0000
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-ee-cc-
Q 010250 252 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GC-DK- 328 (514)
Q Consensus 252 ~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~-~~- 328 (514)
.+.+++++.+. ++....+++.| ++.+|.+. +.+.+++|.++|++||+++|+||+|..+...|..+ .. ..
T Consensus 152 ---~d~~~l~~~l~---~~~~~v~~~~p-~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 223 (393)
T PRK05764 152 ---LTVEQLEAAIT---PKTKALILNSP-SNPTGAVY-SPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLS 223 (393)
T ss_pred ---CCHHHHHHhhC---ccceEEEEECC-CCCCCccc-CHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcC
Confidence 11356666653 23334455555 55566654 45789999999999999999999998764333221 11 11
Q ss_pred cCCCC-ch--hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHH
Q 010250 329 YSIKP-DL--VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQ 403 (514)
Q Consensus 329 ~gv~p-Di--v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~ 403 (514)
.+..+ ++ .+|||.++..++++|++++++++++.+... ....+.+.+++++.++.+.|+...+ +++.+.
T Consensus 224 ~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 296 (393)
T PRK05764 224 PELRDRTITVNGFSKAYAMTGWRLGYAAGPKELIKAMSKL-------QSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQA 296 (393)
T ss_pred CCCcCCEEEEecCcccccCccceeEEEecCHHHHHHHHHH-------HhhcccCCChHHHHHHHHHHcCChHHHHHHHHH
Confidence 12211 22 258998873338999999999999888642 1123456678888877777752111 234556
Q ss_pred HHHHHHHHHhhhhhccCCCceeEEEeee-eeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEeeC-----CEE
Q 010250 404 VNKIAPKFQDGVKAFSDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG-----DNI 476 (514)
Q Consensus 404 ~~~~~~~l~~~L~~l~~~~~~~~v~g~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g-----~~i 476 (514)
++++.+.+++.|+++....+ ..+.| .++++.+........ . ....+...++ ++||.+.++. +++
T Consensus 297 ~~~~~~~l~~~L~~~~g~~~---~~~~g~~~~~~~~~~~~~~~~-----~-~~~~~~~~l~~~~gi~v~~g~~f~~~~~v 367 (393)
T PRK05764 297 FEERRDLMVDGLNEIPGLEC---PKPEGAFYVFPNVSKLLGKSI-----T-DSLEFAEALLEEAGVAVVPGIAFGAPGYV 367 (393)
T ss_pred HHHHHHHHHHHHhhCCCCcc---cCCCcceEEEEeccccccccc-----C-CHHHHHHHHHHhCCEEEccccccCCCCEE
Confidence 66677777777776522222 22344 455666653211000 0 1245666665 5799998642 579
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 477 MMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 477 Ri~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
||+ +..+++++++++++|.+++++
T Consensus 368 Ris--~~~~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 368 RLS--YATSLEDLEEGLERIERFLES 391 (393)
T ss_pred EEE--ecCCHHHHHHHHHHHHHHHHh
Confidence 999 667999999999999998864
No 135
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.84 E-value=4.5e-19 Score=181.72 Aligned_cols=344 Identities=17% Similarity=0.177 Sum_probs=224.8
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC-ccc----cccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYH----SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE 173 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~----~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse 173 (514)
+-.|+|..++ +..+..|++++.+...... ..+ ......++...+..+.++++++....+.|+|+.+.|+
T Consensus 22 ~~vylD~aa~------~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~ 95 (405)
T COG0520 22 PLVYLDNAAT------SQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTE 95 (405)
T ss_pred CeEEecCccc------ccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhH
Confidence 3468887554 3468899999998875421 111 1111223455666777788775433589999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHH
Q 010250 174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS 253 (514)
Q Consensus 174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (514)
|+.......... - ..++.||+.+--+|....-...+...... .+..++..+. .
T Consensus 96 aln~va~~l~~~----~-~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga---------~v~~i~~~~~-------------g 148 (405)
T COG0520 96 ALNLVARGLGRS----L-KPGDEIVVSDLEHHSNIVPWQELAKRTGA---------KVRVIPLDDD-------------G 148 (405)
T ss_pred HHHHHHHHhhhh----h-cCCCEEEEccCcchhhHHHHHHHHHhcCc---------EEEEEecCCC-------------C
Confidence 999888755211 1 23478888888888765433332211000 0111111100 0
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCC
Q 010250 254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKP 333 (514)
Q Consensus 254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~p 333 (514)
..+.+++++++. +++.+|.+..+.+..|.+.| +++|.++|+++|+++++|-+|+ +|.. .++...+..
T Consensus 149 ~~~~~~~~~~i~----~~Tklvais~vSn~tG~~~p----v~~I~~la~~~ga~v~VDaaq~-~~h~----~idv~~l~~ 215 (405)
T COG0520 149 LLDLDALEKLIT----PKTKLVALSHVSNVTGTVNP----VKEIAELAHEHGALVLVDAAQA-AGHL----PIDVQELGC 215 (405)
T ss_pred CcCHHHHHHhcC----CCceEEEEECccccccccch----HHHHHHHHHHcCCEEEEECccc-cCcc----CCCchhcCC
Confidence 111466666553 67889999999999999998 9999999999999999999997 4322 344445567
Q ss_pred chhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCccc-----ccCCC----------CCcHHHHHHHHHHHHHHh
Q 010250 334 DLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS-----HGFTY----------SGHPVSCAVAIEALKIYK 396 (514)
Q Consensus 334 Div~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~-----~~~t~----------~~~pl~~aaa~aal~~~~ 396 (514)
|.+.|| |+|.|. ..+|++++++++.+.+.+.....+... ...++ ..|..+..+..++++.++
T Consensus 216 Df~afsgHKwl~gP-~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~ 294 (405)
T COG0520 216 DFLAFSGHKWLLGP-TGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLL 294 (405)
T ss_pred CEEEEcccccccCC-CceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHH
Confidence 999888 889987 579999999999998854211101000 01111 123334444446666665
Q ss_pred h---ccHHHHHHHHHHHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee
Q 010250 397 E---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS 472 (514)
Q Consensus 397 ~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~ 472 (514)
+ +++.++.+++.+++.+.|+++....+.+.. ...+.++.|.+.... ...+...|.++||.++.+
T Consensus 295 ~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~------------~~dv~~~L~~~gI~vr~g 362 (405)
T COG0520 295 EIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIH------------PHDVATLLDEKGIAVRAG 362 (405)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCC------------HHHHHHHHHhCCeEEEec
Confidence 4 456788888888888888877433332222 135667777766532 456889999999888754
Q ss_pred C-------------CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 473 G-------------DNIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 473 g-------------~~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
. ..+|+++.+..|+||||++++.|++..+
T Consensus 363 ~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 363 HHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred cccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 2 2399999999999999999999998764
No 136
>PRK09148 aminotransferase; Validated
Probab=99.84 E-value=1.8e-18 Score=179.56 Aligned_cols=350 Identities=13% Similarity=0.076 Sum_probs=210.4
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhcC-cCCCC-eEEEeCChhHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEA 174 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~-~v~~~~sGseA 174 (514)
.|+.+|||..|. ..++. ++.+.+++.+.++... ..+....+..+....+++.+.+.++ ....+ +|++++|+++|
T Consensus 28 ~~~~~i~l~~~~--p~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a 104 (405)
T PRK09148 28 AGADIIDLGMGN--PDLPT-PQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEG 104 (405)
T ss_pred cCCCeEEcCCCC--CCCCC-CHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHH
Confidence 467889997763 23443 6888888887764311 1111111222333444444443322 12345 79999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250 175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254 (514)
Q Consensus 175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
+..++.... ..++.|++.+++|.+........ |... ..++.... + .+
T Consensus 105 l~~~~~~l~--------~~gd~Vl~~~P~y~~~~~~~~~~-g~~v------------~~v~~~~~------~----~~-- 151 (405)
T PRK09148 105 FANMAQAIT--------APGDVILCPNPSYPIHAFGFIMA-GGVI------------RSVPAEPD------E----EF-- 151 (405)
T ss_pred HHHHHHHhc--------CCCCEEEEcCCCCcccHHHHHhc-CCEE------------EEEeCCCC------C----CC--
Confidence 999887664 34578999999998864332221 1111 00110000 0 00
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-ecccCCCC
Q 010250 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYSIKP 333 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~~gv~p 333 (514)
.+++++++....++....+++.| ++.+|.+. +.+.+++|.++|++||+++|+||+|..|...+..+. .....-.+
T Consensus 152 --~~~l~~~~~~~~~~~~~v~l~~P-~NPtG~~~-s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~ 227 (405)
T PRK09148 152 --FPALERAVRHSIPKPIALIVNYP-SNPTAYVA-DLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAK 227 (405)
T ss_pred --ccCHHHHHhhccccceEEEEeCC-CCCCCcCC-CHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCcc
Confidence 24455555443334445555556 45566544 678899999999999999999999987643332211 11111112
Q ss_pred c----hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHH
Q 010250 334 D----LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKI 407 (514)
Q Consensus 334 D----iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~ 407 (514)
+ +-+|||.++..++++|++++++++++.+... ....+++.+.+++.++.+.|+..++ +.+.+.++++
T Consensus 228 ~~~i~~~SfSK~~~~pGlR~G~~v~~~~~i~~l~~~-------~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~ 300 (405)
T PRK09148 228 DVTVEFTSMSKTFSMAGWRMGFAVGNERLIAALTRV-------KSYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKR 300 (405)
T ss_pred CcEEEEeccccccCCcchheeeeeCCHHHHHHHHHH-------HHHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 3 2368998874339999999999999888631 1112445566777777777752111 2345667777
Q ss_pred HHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEEEe
Q 010250 408 APKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMMS 479 (514)
Q Consensus 408 ~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iRi~ 479 (514)
.+.+.+.|+++ .... ....-|+++++.++...... ....++..++ ++||.+.++ .+++||+
T Consensus 301 r~~l~~~L~~~-~~~~--~~p~~g~f~~~~l~~~~~~~--------~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~ 369 (405)
T PRK09148 301 RDVLVESFGRA-GWDI--PPPAASMFAWAPIPEAFRHL--------GSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIA 369 (405)
T ss_pred HHHHHHHHHHc-CCcc--CCCCeeEEEEEECCCccCCC--------CHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEE
Confidence 77787777764 2111 11234667777775321100 0234666665 789999874 2469999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010250 480 PPFIMSPEEVDELISKYGKALKATEERV 507 (514)
Q Consensus 480 p~~~~t~e~id~~~~~l~~~l~~~~~~~ 507 (514)
+..+++++++++++|.++++++.+.+
T Consensus 370 --~~~~~~~l~~al~~l~~~l~~~~~~~ 395 (405)
T PRK09148 370 --LVENEQRIRQAARNIKRFLSSADETL 395 (405)
T ss_pred --ecCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999999999998776654
No 137
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.84 E-value=9e-19 Score=180.74 Aligned_cols=340 Identities=16% Similarity=0.158 Sum_probs=204.0
Q ss_pred ccCCCCCHHHHHHHHHHHhcCCc----cccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHh
Q 010250 112 TALGGSEPRLVAAATAQLNTLPF----YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNN 187 (514)
Q Consensus 112 ~~lGh~~p~v~~A~~~~l~~~~~----~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~ 187 (514)
.-+|.-++.+++|+.+....... .+.......+...++.+.+++++ +.+.++|++||++|+..+++...
T Consensus 27 ~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~---g~~~~~~~~g~t~a~~~al~~l~---- 99 (387)
T PRK09331 27 QRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFL---GMDEARVTHGAREGKFAVMHSLC---- 99 (387)
T ss_pred hcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHh---CCCcEEEeCCHHHHHHHHHHHhc----
Confidence 45788899999999988743221 11211223456788999999998 34678999999999999998764
Q ss_pred hcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh
Q 010250 188 ALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE 267 (514)
Q Consensus 188 ~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~ 267 (514)
.++++|++...+|.+ ...++...|.... .++.+..+. ...+.+++++.+.+.
T Consensus 100 ----~~gd~Vlv~~~~h~s-~~~~~~~~G~~~~------------~v~~~~~~~-----------~~~d~~~l~~~l~~~ 151 (387)
T PRK09331 100 ----KKGDYVVLDGLAHYT-SYVAAERAGLNVR------------EVPKTGYPE-----------YKITPEAYAEKIEEV 151 (387)
T ss_pred ----CCCCEEEECCCchHH-HHHHHHHcCCEEE------------EEeCccCcC-----------CCcCHHHHHHHHHHh
Confidence 334567776554433 3222222222111 111100000 012257777777542
Q ss_pred ---CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhh
Q 010250 268 ---GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKAL 342 (514)
Q Consensus 268 ---~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l 342 (514)
..+++++|+++.++++.|.+.| +++|.++|++||+++|+|++|+ +|..+ +....+++ |++ +++|++
T Consensus 152 ~~~~~~~~~lV~l~~~~~~tG~~~~----l~~I~~la~~~g~~livD~a~~-~g~~~--~~~~~~g~--D~~~~s~~K~l 222 (387)
T PRK09331 152 KEETGKPPALALLTHVDGNYGNLAD----AKKVAKVAHEYGIPFLLNGAYT-VGRMP--VDGKKLGA--DFIVGSGHKSM 222 (387)
T ss_pred hhccCCCCEEEEEECCCCCCccccc----HHHHHHHHHHcCCEEEEECCcc-cCCcC--CCHHHcCC--CEEEeeCcccc
Confidence 1135788888888888898887 9999999999999999999997 54332 12223344 555 567999
Q ss_pred cCCcccceeEEeCHHHHHHhhhccCCCCcc---cccCCCCCcHHHHHHHHHHHHHHhhc-cHHHHHHHHHHHHHhhhhhc
Q 010250 343 SSAYMPIGAILVSPEVSEVIHSQSNTLGSF---SHGFTYSGHPVSCAVAIEALKIYKER-NIVEQVNKIAPKFQDGVKAF 418 (514)
Q Consensus 343 ~gG~~pig~v~~~~~i~~~l~~~~~~~~~~---~~~~t~~~~pl~~aaa~aal~~~~~~-~~~~~~~~~~~~l~~~L~~l 418 (514)
+++ .++|++++++++++.+.......... ..+++. .+...++++++++.+.+. +..++..++.+++++.|+++
T Consensus 223 ~~~-~~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l 299 (387)
T PRK09331 223 AAS-APSGVLATTEEYADKVFRTSRKFGVKEVELLGCTL--RGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKI 299 (387)
T ss_pred cCC-CCEEEEEECHHHHhhcccccCCCcccceeeeceec--CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 876 68999999999888775422111000 011222 233445555666655432 34555677788888888876
Q ss_pred cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CE-EEEeCCCCCCHHHHHHHHHHH
Q 010250 419 SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DN-IMMSPPFIMSPEEVDELISKY 496 (514)
Q Consensus 419 ~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~-iRi~p~~~~t~e~id~~~~~l 496 (514)
....+..+-.....+..++..... .........+..+.+.|.++||...+.+ .. +|+.. ..+|++|+++++++|
T Consensus 300 ~g~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~i~ri~~-~g~t~~di~~l~~aL 375 (387)
T PRK09331 300 EGFKQLGEKPRNHDLMKFETPSFD---EIAKKHKRRGFFLYEELKKRGIHGIKPGATKEFKLST-YGLTWEQVEYVADAF 375 (387)
T ss_pred CCEEEeccCcCcCCeEEEeCCchh---HHhhhccccchhHHHHHHHcCceEEccCCceEEEEEe-ccCCHHHHHHHHHHH
Confidence 332222110112334444432100 0000000113458889999999854433 33 66665 458999999999999
Q ss_pred HHHHHH
Q 010250 497 GKALKA 502 (514)
Q Consensus 497 ~~~l~~ 502 (514)
++++++
T Consensus 376 ~~i~~~ 381 (387)
T PRK09331 376 KEIAEK 381 (387)
T ss_pred HHHHHh
Confidence 988765
No 138
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.84 E-value=1.7e-19 Score=185.13 Aligned_cols=307 Identities=15% Similarity=0.150 Sum_probs=181.6
Q ss_pred chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCC
Q 010250 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK 223 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~ 223 (514)
+...++.+.+++++ +.+.+++++||++++..++.... ..+++|++....|+. ...++...|.....
T Consensus 51 ~~~~~~~e~lA~~~---g~~~~~i~~g~~~a~~~~~~~l~--------~~gd~Vl~~~~~h~s-~~~~~~~~g~~~~~-- 116 (370)
T TIGR02539 51 PPIHDFLEDLAEFL---GMDEARVTHGAREGKFAVMHALC--------KEGDWVVLDGLAHYT-SYVAAERAGLNVKE-- 116 (370)
T ss_pred hHHHHHHHHHHHHh---CCCceEEECChHHHHHHHHHHhh--------CCCCEEEECCcccHH-HHHHHHHcCCEEEE--
Confidence 35667888899887 45678889999999999987664 234566665555433 32323333322110
Q ss_pred CCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC---CCcEEEEEEccccCCCCcccCChhHHHHHHHH
Q 010250 224 FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG---PETIAAFIAEPVIGAGGVIPPPATYFEKVQAV 300 (514)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~---~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l 300 (514)
++... +.....++++|++.+.+.. .+++.+|+++.+++..|.+.+ +++|.++
T Consensus 117 ----------~~~~~-----------~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~----l~~i~~l 171 (370)
T TIGR02539 117 ----------VPHTG-----------HPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD----AGKVAKV 171 (370)
T ss_pred ----------EecCC-----------cccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC----HHHHHHH
Confidence 11000 0000112577877775321 124567777777788898887 9999999
Q ss_pred HHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcc---ccc
Q 010250 301 VKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF---SHG 375 (514)
Q Consensus 301 ~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~---~~~ 375 (514)
|++||+++|+||+|. +|..+..+ ....+|++ +++|++++| .|+|++++++++++.+.....++... ..+
T Consensus 172 a~~~~~~livDea~~-~g~~~~~~----~~~~~di~v~s~sK~~~~~-g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~ 245 (370)
T TIGR02539 172 CREKGVPLLLNCAYT-VGRMPVSA----KEIGADFIVGSGHKSMAAS-GPCGVLGMSEEWEDIVLRKSRYSPVKEVELLG 245 (370)
T ss_pred HHHcCCeEEEECccc-cCCcCCCH----HHcCCCEEEeeCcccccCC-CCEEEEEECHHHHhhhcccccCCccceeeeec
Confidence 999999999999997 44332211 12235765 688999876 58999999999999887532211000 001
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhc-cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccch
Q 010250 376 FTYSGHPVSCAVAIEALKIYKER-NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGI 454 (514)
Q Consensus 376 ~t~~~~pl~~aaa~aal~~~~~~-~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~ 454 (514)
++. ...+++++.++++...+. +...+..++.++++++|+++ ...++......+.++.++++..... ...+...
T Consensus 246 ~~~--~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~~~---~~~~~~~ 319 (370)
T TIGR02539 246 CTS--RGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAELEDI-GFIQLGQKPKEHDLVKFETPGFHEI---AQKHKRR 319 (370)
T ss_pred ccc--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CcEEEccCCCcCceEEEECCchhHH---hhhhccc
Confidence 111 123455566666643221 11233334456888988876 2221111122344555544210000 0000001
Q ss_pred HHHHHHHHHHCCcE-EEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 455 GAYFGAQCEKHGML-VRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 455 ~~~~~~~l~~~Gv~-~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
...+.+.|+++||+ +++.. +.||++. ..+|++|+++++++|++++++
T Consensus 320 ~~~~~~~L~e~GI~~ir~~~~~~iRis~-~~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 320 GYFLYEELKKRGIHGIRSGQTKYFKLSV-YGLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred cHHHHHHHHhCCCccccCCcceEEEEEe-cCCCHHHHHHHHHHHHHHHHh
Confidence 34578899999997 66543 4799997 368999999999999988754
No 139
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.84 E-value=3.2e-18 Score=177.68 Aligned_cols=351 Identities=13% Similarity=0.086 Sum_probs=202.8
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcC-CccccccccCCchHHHHHHHHHHhcC-cCCCC-eEEEeCChhHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTL-PFYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEA 174 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~-~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~-~v~~~~sGseA 174 (514)
.|..++||.++ .+.+..++.+.+++.+.+... ...++...+.......+++.+.+..+ ....+ ++++++++.+|
T Consensus 31 ~~~~~~~l~~g---~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~a 107 (403)
T PRK08636 31 AGEDIIDFSMG---NPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEG 107 (403)
T ss_pred cCCCEEEcCCc---CCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHH
Confidence 45678999777 334444667888877766432 11111112233444555555554432 13445 79999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcccCCCCCCChhHH
Q 010250 175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYWRYAHPGETEEEY 252 (514)
Q Consensus 175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 252 (514)
+..++++.. ..++.|++.+++|.+........+.. .. .++. .+.|. .+.+.
T Consensus 108 l~~~~~~l~--------~~gd~Vlv~~P~y~~~~~~~~~~g~~-~~------------~v~~~~~~~~~-----~d~~~- 160 (403)
T PRK08636 108 YVHLVQAIT--------NPGDVAIVPDPAYPIHSQAFILAGGN-VH------------KMPLEYNEDFE-----LDEDQ- 160 (403)
T ss_pred HHHHHHHhC--------CCCCEEEEcCCCCcchHHHHHhcCCE-EE------------EEeccccccCc-----cChhh-
Confidence 999988663 34578999999998864333322221 10 0110 00010 00011
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eecccCC
Q 010250 253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYSI 331 (514)
Q Consensus 253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~gv 331 (514)
..+.+++++.+..++....+++.|. +.+|.+ .+.+-+++|.++|++|++++|.||+|..+-..+... ......-
T Consensus 161 ---l~~~l~~~~~~~~~~~~~i~~~~P~-NPTG~~-~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~ 235 (403)
T PRK08636 161 ---FFENLEKALRESSPKPKYVVVNFPH-NPTTAT-VEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEG 235 (403)
T ss_pred ---hhhHHHHHHhhccCCceEEEEeCCC-CCCCcc-CCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCC
Confidence 1235566665433333444444454 555544 466889999999999999999999998773333211 1111111
Q ss_pred CCch----hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHH
Q 010250 332 KPDL----VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVN 405 (514)
Q Consensus 332 ~pDi----v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~ 405 (514)
.+|. -+|||.++..++++|++++++++++.+... .....++.+.....++..+++...+ +++.+.++
T Consensus 236 ~~~~~i~~~S~SK~~~~~GlRiG~iv~~~~li~~~~~~-------~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~ 308 (403)
T PRK08636 236 AKDVAVESYTLSKSYNMAGWRVGFVVGNKKLVGALKKI-------KSWLDYGMFTPIQVAATIALDGDQSCVEEIRETYR 308 (403)
T ss_pred ccccEEEEEecccccCCccceeeeeeCCHHHHHHHHHH-------HHHhcccCChHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 1232 258999864339999999999998887642 1111233444445555444431111 12345556
Q ss_pred HHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH-HHCCcEEEee-------CCEEE
Q 010250 406 KIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVS-------GDNIM 477 (514)
Q Consensus 406 ~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~-------g~~iR 477 (514)
++.+.+.+.|++. ++.......|+++++.+++..... ....+...+ .++||.+.++ .++||
T Consensus 309 ~~~~~l~~~L~~~---~~~~~~p~~g~~~~~~l~~~~~~~--------~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iR 377 (403)
T PRK08636 309 KRRDVLIESFANA---GWELQKPRASMFVWAKIPEPARHL--------GSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVR 377 (403)
T ss_pred HHHHHHHHHHHHC---CCcccCCCcceEEEEECCCccCCC--------CHHHHHHHHHHhCCEEEecchhhCcCCCCeEE
Confidence 6666677766653 221112234777888875421100 023466654 4689999875 25699
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 478 MSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 478 i~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
|+ +..+++++++++++|.++++.+
T Consensus 378 i~--~~~~~~~l~~~~~rl~~~l~~~ 401 (403)
T PRK08636 378 IA--LIENENRIRQAARNIKKFLKEL 401 (403)
T ss_pred EE--ecCCHHHHHHHHHHHHHHHHhh
Confidence 99 5578999999999999988653
No 140
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.84 E-value=1.5e-18 Score=179.44 Aligned_cols=341 Identities=11% Similarity=0.098 Sum_probs=198.6
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc-cccccccCCchHHHHHHHHHHhcC-cCCCC-eEEEeCChhHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEA 174 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~-~~~~~~~~~~~~~ela~~L~~~~~-~~~~~-~v~~~~sGseA 174 (514)
+|+.++||..|. ..++ .+|.+.+++.+.+..... .+....+..+....+++.+....+ ..+.+ .|++++++.+|
T Consensus 28 ~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~a 104 (388)
T PRK07366 28 AGKELIDLSLGS--SDLP-APAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEG 104 (388)
T ss_pred cCCCeEEeCCCC--CCCC-CCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHH
Confidence 467789987774 3344 478899999887753211 111111222333344444433322 13455 69999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250 175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254 (514)
Q Consensus 175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
+..+++... ..++.|++.+++|.+........+.. .. .++.... + .+ .
T Consensus 105 l~~~~~~l~--------~~gd~Vlv~~P~y~~~~~~~~~~g~~-~~------------~v~~~~~------~----~~-~ 152 (388)
T PRK07366 105 TAHLPLAVL--------NPGDFALLLDPGYPSHAGGVYLAGGQ-IY------------PMPLRAE------N----DF-L 152 (388)
T ss_pred HHHHHHHhC--------CCCCEEEEcCCCCcchHHHHHhcCCE-EE------------EEECCCc------c----CC-C
Confidence 999888653 34578999999998875333322221 10 1111000 0 00 0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCC-
Q 010250 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKP- 333 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~p- 333 (514)
.+++++++.+. + ++.++++.+.++.+|.+. +.+.+++|.++|++||+++|.||+|..|-..+...........+
T Consensus 153 ~d~~~l~~~~~---~-~~k~i~l~~p~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~ 227 (388)
T PRK07366 153 PVFADIPTEVL---A-QARLMVLSYPHNPTTAIA-PLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPE 227 (388)
T ss_pred CCHHHHHHhhc---c-cceEEEEeCCCCCCCccC-CHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCC
Confidence 01234443332 2 234455555567677654 67889999999999999999999999774333210011111111
Q ss_pred -c-hh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHH
Q 010250 334 -D-LV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNK 406 (514)
Q Consensus 334 -D-iv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~ 406 (514)
+ ++ +|||.++..++++|++++++++++.+.... ....++..+..+.++++++..-++ ++..+.+++
T Consensus 228 ~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li~~l~~~~-------~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~ 300 (388)
T PRK07366 228 KSVSIEFFTLSKSYNMGGFRIGFAIGNAQLIQALRQVK-------AVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQ 300 (388)
T ss_pred cccEEEEeecccccCCcchhheehcCCHHHHHHHHHHH-------hhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 2 22 799988643399999999999998886421 111222222233444555531111 234566777
Q ss_pred HHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH-HHCCcEEEee-------CCEEEE
Q 010250 407 IAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVS-------GDNIMM 478 (514)
Q Consensus 407 ~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~-------g~~iRi 478 (514)
+.+.+.+.|+++ ++......-|.++++.+.+.... ....+...+ .++||.+.++ .++|||
T Consensus 301 ~r~~l~~~L~~~---~~~~~~p~~g~f~~~~~~~~~~~---------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi 368 (388)
T PRK07366 301 RRDAFINALHQI---GWPVPLPEATMYVWAKLPEPWQG---------NSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRF 368 (388)
T ss_pred HHHHHHHHHHHC---CCcccCCCeeEEEEEECCcccCC---------CHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEE
Confidence 777777777765 22112233577788887542100 023466666 5679999874 156999
Q ss_pred eCCCCCCHHHHHHHHHHHHHH
Q 010250 479 SPPFIMSPEEVDELISKYGKA 499 (514)
Q Consensus 479 ~p~~~~t~e~id~~~~~l~~~ 499 (514)
+ +..+++++++++++|.+.
T Consensus 369 ~--~~~~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 369 A--LVHDPDILEEAVERIAAF 387 (388)
T ss_pred E--ecCCHHHHHHHHHHHHHh
Confidence 9 567899999999999865
No 141
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.84 E-value=1.3e-18 Score=180.53 Aligned_cols=335 Identities=11% Similarity=0.079 Sum_probs=203.2
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-ccccccCCchHHHHHHHHHHhcC-cCCC-CeEEEeCChhHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFWNRTTKPSLDLAKELLEMFT-ASKM-AKVFFTNSGSEA 174 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~~~~~~~~~~~~ela~~L~~~~~-~~~~-~~v~~~~sGseA 174 (514)
.|..++||..|.. .++ .++.+.+++.+.+.....+ +.. .+..+....+++.+....+ .... ++|++++|+++|
T Consensus 30 ~~~~~i~l~~g~p--~~~-~~~~~~~~~~~~~~~~~~~~y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a 105 (399)
T PRK07681 30 AGHKMIDLSIGNP--DMP-PADFVREEMVHTANQKESYGYTL-SGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDG 105 (399)
T ss_pred cCCCeEEeCCCCC--CCC-CCHHHHHHHHHHHhccccCCCCC-CCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHH
Confidence 3667899987742 244 4678888888877543222 111 2233334445555543322 1344 689999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250 175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254 (514)
Q Consensus 175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
+..++++.. ..++.|++.+++|.+........+.... .++.... ..+ .
T Consensus 106 l~~~~~~~~--------~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~-------------~v~~~~~----------~~~-~ 153 (399)
T PRK07681 106 LVHLPMVYA--------NPGDIILVPDPGYTAYETGIQMAGATSY-------------YMPLKKE----------NDF-L 153 (399)
T ss_pred HHHHHHHhC--------CCCCEEEECCCCccchHHHHHhcCCEEE-------------EEecCCC----------CCC-c
Confidence 999887653 3357899999999876543332221111 0111000 000 0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEc-cccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-e-ecccCC
Q 010250 255 RLANNLEDLILKEGPETIAAFIAE-PVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-G-CDKYSI 331 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aavivE-pv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~-~~~~gv 331 (514)
.+++++++.+. +++.+|++. | ++.+|.+. +++.+++|.++|++||+++|.||+|..|-..+... . ....+
T Consensus 154 ~d~~~l~~~~~----~~~k~v~l~~P-~NPTG~~~-s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~- 226 (399)
T PRK07681 154 PDLELIPEEIA----DKAKMMILNFP-GNPVPAMA-HEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPG- 226 (399)
T ss_pred CCHHHHHHhcc----ccceEEEEeCC-CCCcCcCC-CHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCC-
Confidence 11355555443 234455554 6 55666554 57889999999999999999999999774333211 1 11111
Q ss_pred CCc----hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHH
Q 010250 332 KPD----LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVN 405 (514)
Q Consensus 332 ~pD----iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~ 405 (514)
.+| +-+|||.++..++++|++++++++++.+... ....+++.+.+++.++.++|+.-.+ ++..+.++
T Consensus 227 ~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l~~~~~~~-------~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~ 299 (399)
T PRK07681 227 AKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQF-------KSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQ 299 (399)
T ss_pred CcccEEEEeecccccCCccceeEEEecCHHHHHHHHHH-------HhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 122 2378998874338999999999999888641 1123455667777777777753111 22345566
Q ss_pred HHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee-------CCEEE
Q 010250 406 KIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-------GDNIM 477 (514)
Q Consensus 406 ~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~-------g~~iR 477 (514)
++.+.+.+.|++. ...+ .....|.++++.+.+.. ....+...+++ +||.+.++ .+.+|
T Consensus 300 ~~~~~l~~~L~~~-g~~~--~~p~~g~f~~~~l~~~~-----------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iR 365 (399)
T PRK07681 300 ERRDTLVDGFRTF-GWNV--DKPAGSMFVWAEIPKGW-----------TSLSFAYALMDRANVVVTPGHAFGPHGEGFVR 365 (399)
T ss_pred HHHHHHHHHHHHC-CCcc--cCCCeeeEEEEECCCCC-----------CHHHHHHHHHHhCCEEEeCChhhCcCCCCeEE
Confidence 6677777777664 2111 11234777778775321 13457777776 89999864 14699
Q ss_pred EeCCCCCCHHHHHHHHHHHHH
Q 010250 478 MSPPFIMSPEEVDELISKYGK 498 (514)
Q Consensus 478 i~p~~~~t~e~id~~~~~l~~ 498 (514)
|+ +..+++++++++++|.+
T Consensus 366 is--~~~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 366 IA--LVQDEEVLQQAVENIRN 384 (399)
T ss_pred EE--ecCCHHHHHHHHHHHHH
Confidence 99 55788999999999988
No 142
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.84 E-value=4.1e-18 Score=176.20 Aligned_cols=337 Identities=16% Similarity=0.168 Sum_probs=204.2
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC----c-C-CCCeEEEeCChhH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT----A-S-KMAKVFFTNSGSE 173 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~----~-~-~~~~v~~~~sGse 173 (514)
..+|||..|.. .++. ++.+.+++.+.+......+. +.....++.+.+++++. . . ..++|++++|+++
T Consensus 30 ~~~i~l~~~~~--~~~~-~~~~~~~~~~~~~~~~~~Y~----~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~ 102 (391)
T PRK07309 30 PGILKLTLGEP--DFTT-PDHVKEAAKRAIDANQSHYT----GMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATE 102 (391)
T ss_pred CCeEEcCCCCC--CCCC-CHHHHHHHHHHHhcCCCCCC----CCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHH
Confidence 45899987753 3553 67788898887754211111 11122344455554432 1 1 2368999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHH
Q 010250 174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEY 252 (514)
Q Consensus 174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 252 (514)
|+..++.... .+++.|++.+++|.+....... .|... ..++.+ ..|.
T Consensus 103 al~~~~~~~~--------~~gd~vl~~~p~y~~~~~~~~~-~g~~~------------~~~~~~~~~~~----------- 150 (391)
T PRK07309 103 ALSASLTAIL--------EPGDKVLLPAPAYPGYEPIVNL-VGAEI------------VEIDTTENDFV----------- 150 (391)
T ss_pred HHHHHHHHhc--------CCCCEEEEeCCCCcchHHHHHH-cCCEE------------EEEecCCcCCc-----------
Confidence 9999988653 3456899999999886432221 12111 111110 0000
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eecccCC
Q 010250 253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYSI 331 (514)
Q Consensus 253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~gv 331 (514)
.+.+++++.+... ++++.++++...++.+|.+. +.+.+++|.++|++||+++|+||++..|-..|... ... ..
T Consensus 151 --~d~~~l~~~~~~~-~~~~~~i~l~~P~NPtG~~~-s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~--~~ 224 (391)
T PRK07309 151 --LTPEMLEKAILEQ-GDKLKAVILNYPANPTGVTY-SREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIA--EY 224 (391)
T ss_pred --CCHHHHHHHhhcc-CCCeEEEEEECCCCCCCcCc-CHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHH--Hh
Confidence 1146777776532 23455666553356667544 55779999999999999999999998774334221 111 11
Q ss_pred CCc-h-h--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--hccHHHHHH
Q 010250 332 KPD-L-V--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVN 405 (514)
Q Consensus 332 ~pD-i-v--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~~~~~~~~~ 405 (514)
.++ + + +|||.++..++++|++++++++++.+... ....+.+.+++++.++.+.|+... ...+.++++
T Consensus 225 ~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 297 (391)
T PRK07309 225 LPDQTILINGLSKSHAMTGWRIGLIFAPAEFTAQLIKS-------HQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYI 297 (391)
T ss_pred ccCCEEEEecChhhccCccceeEEEEeCHHHHHHHHHH-------HhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHH
Confidence 223 2 2 68998874338999999999999888641 111233556777777777765311 123456677
Q ss_pred HHHHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHH-HHHCCcEEEee-------CCEE
Q 010250 406 KIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQ-CEKHGMLVRVS-------GDNI 476 (514)
Q Consensus 406 ~~~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~~~~~-------g~~i 476 (514)
++.+.+.+.|++. .+ ..... -|.++++.+++.... ....+... +.++||.+.++ ++.|
T Consensus 298 ~~~~~~~~~l~~~---~~-~~~~p~gg~~~~~~l~~~~~~---------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~i 364 (391)
T PRK07309 298 KRRDYIIEKMTDL---GF-KIIKPDGAFYIFAKIPAGYNQ---------DSFKFLQDFARKKAVAFIPGAAFGPYGEGYV 364 (391)
T ss_pred HHHHHHHHHHHHC---CC-eecCCCeeEEEEEECCCCCCC---------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEE
Confidence 7777788877764 21 11222 245556666432110 12345654 55789999864 2479
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 477 MMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 477 Ri~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
|++ +..+++++++++++|.++++++
T Consensus 365 Ri~--~~~~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 365 RLS--YAASMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred EEE--ecCCHHHHHHHHHHHHHHHHhh
Confidence 999 4567899999999999888654
No 143
>PRK08960 hypothetical protein; Provisional
Probab=99.84 E-value=2.8e-18 Score=177.27 Aligned_cols=337 Identities=11% Similarity=0.083 Sum_probs=204.5
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHHH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDT 177 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~~ 177 (514)
|..++|+..|.. .++ .++.+.+++.+.+......+....+..+....+++.+.+.++ ....+++++++++++|+..
T Consensus 31 ~~~~i~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~ 107 (387)
T PRK08960 31 GHDVIHLEIGEP--DFT-TAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLL 107 (387)
T ss_pred CCCeEEeCCCCC--CCC-CCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHH
Confidence 456788776643 233 478899999888864221111111222333344444433221 2356899999999999999
Q ss_pred HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC--cccCCCCCCChhHHHHH
Q 010250 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH--YWRYAHPGETEEEYSTR 255 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 255 (514)
++.+.. .+++.|++.+++|.+........ +... ..+++.. .|. .
T Consensus 108 ~~~~~~--------~~gd~vlv~~p~y~~~~~~~~~~-g~~~------------~~v~~~~~~~~~-------------~ 153 (387)
T PRK08960 108 ASSLLV--------DPGKHWLLADPGYPCNRHFLRLV-EGAA------------QLVPVGPDSRYQ-------------L 153 (387)
T ss_pred HHHHhc--------CCCCEEEEcCCCCcchHHHHHhc-CCeE------------EEEecCcccCCC-------------C
Confidence 887653 34578999999998764322221 1111 1111110 000 1
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCch
Q 010250 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL 335 (514)
Q Consensus 256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDi 335 (514)
+.+++++++. ++...++++.|. +.+|.+. +.+.+++|.++|++||+++|+||+|.++-..+... ....+.+++
T Consensus 154 d~~~l~~~~~---~~~~~i~i~~p~-NPtG~~~-~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~--~~~~~~~~v 226 (387)
T PRK08960 154 TPALVERHWN---ADTVGALVASPA-NPTGTLL-SRDELAALSQALRARGGHLVVDEIYHGLTYGVDAA--SVLEVDDDA 226 (387)
T ss_pred CHHHHHHHhC---ccceEEEEECCC-CCCCcCc-CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC--ChhhccCCE
Confidence 1456666554 234566777775 4556554 56889999999999999999999998773322211 122344565
Q ss_pred h---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH-Hhh--ccHHHHHHHHHH
Q 010250 336 V---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI-YKE--RNIVEQVNKIAP 409 (514)
Q Consensus 336 v---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~-~~~--~~~~~~~~~~~~ 409 (514)
+ +|||.++..++++|++++++++++.+... ....+.+.+.+++.++.++++. ..+ +...+.++++.+
T Consensus 227 i~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~-------~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~ 299 (387)
T PRK08960 227 FVLNSFSKYFGMTGWRLGWLVAPPAAVPELEKL-------AQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRD 299 (387)
T ss_pred EEEeecccccCCcccEEEEEEcCHHHHHHHHHH-------HhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHH
Confidence 5 48998874339999999999998887631 2223455677777777777642 110 123455666667
Q ss_pred HHHhhhhhccCCCceeE-EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee--------CCEEEEe
Q 010250 410 KFQDGVKAFSDSPIIGE-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS--------GDNIMMS 479 (514)
Q Consensus 410 ~l~~~L~~l~~~~~~~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~--------g~~iRi~ 479 (514)
.+.+.|++. ++... ...-|.++++++.+... ....++..|+ ++||.+.|+ +++||++
T Consensus 300 ~l~~~L~~~---~~~~~~~p~g~~f~~~~~~~~~~----------~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~ 366 (387)
T PRK08960 300 FLLPALREL---GFGIAVEPQGAFYLYADISAFGG----------DAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFA 366 (387)
T ss_pred HHHHHHHhc---CCcCCcCCCeeEEEEEeccccCC----------CHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEE
Confidence 777777654 22111 12336677777753110 0345666665 689999864 2479999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHH
Q 010250 480 PPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 480 p~~~~t~e~id~~~~~l~~~l~ 501 (514)
. ..+.+++.+++++|.+++.
T Consensus 367 ~--~~~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 367 Y--TQSLPRLQEAVERIARGLR 386 (387)
T ss_pred e--cCCHHHHHHHHHHHHHHHh
Confidence 4 4578888888888887664
No 144
>PLN02656 tyrosine transaminase
Probab=99.84 E-value=5.1e-18 Score=176.45 Aligned_cols=346 Identities=15% Similarity=0.123 Sum_probs=207.3
Q ss_pred CCCCEEEEccCCcccccC-CCCCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhcC-----cCCCCeEEEeC
Q 010250 97 VNGKKYLDSLAGLWCTAL-GGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFT-----ASKMAKVFFTN 169 (514)
Q Consensus 97 ~dG~~ylD~~s~~~~~~l-Gh~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~~-----~~~~~~v~~~~ 169 (514)
..|+.+++|..|...... -..++.+++++.+.+.... ..+. +.....++.+.+++++. ....+++++++
T Consensus 28 ~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~----~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~ 103 (409)
T PLN02656 28 ENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYA----PTVGLPQARRAIAEYLSRDLPYKLSLDDVFITS 103 (409)
T ss_pred ccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCC----CCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeC
Confidence 367889999877432111 3357889999998886521 1111 11222345455555442 12457899999
Q ss_pred ChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcccCCCCCC
Q 010250 170 SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYWRYAHPGE 247 (514)
Q Consensus 170 sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 247 (514)
|+++|+..++.... ..++.|++.+++|.......... |... ..++. .+.|.
T Consensus 104 G~~~al~~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~-g~~~------------~~i~~~~~~~~~------ 156 (409)
T PLN02656 104 GCTQAIDVALSMLA--------RPGANILLPRPGFPIYELCAAFR-HLEV------------RYVDLLPEKGWE------ 156 (409)
T ss_pred ChHHHHHHHHHHHh--------CCCCeEEEeCCCCCcHHHHHHHc-CCEE------------EEEeCCCcCCCC------
Confidence 99999999988653 33468999999997653222211 1110 00111 00011
Q ss_pred ChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-ee
Q 010250 248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GC 326 (514)
Q Consensus 248 ~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~ 326 (514)
.+.+++++++. ++..+++++.|. +.+|.+. +++.+++|.++|++||+++|+||+|.+|-..+..+ ..
T Consensus 157 -------~d~~~l~~~~~---~~~~~v~l~~P~-NPtG~~~-s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~ 224 (409)
T PLN02656 157 -------VDLDAVEALAD---QNTVALVIINPG-NPCGNVY-SYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPM 224 (409)
T ss_pred -------CCHHHHHHHhc---cCceEEEEECCC-CCCCCCC-CHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccH
Confidence 11466666653 345667777774 4556554 56789999999999999999999999875444321 11
Q ss_pred cccCCCCch---hchhhhhcCCcccceeEEeC--------HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH
Q 010250 327 DKYSIKPDL---VSFAKALSSAYMPIGAILVS--------PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY 395 (514)
Q Consensus 327 ~~~gv~pDi---v~~sK~l~gG~~pig~v~~~--------~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~ 395 (514)
..++-...+ -+|||.++..++++|+++++ +++++.+... .. ...+.+.+++.++.++|+..
T Consensus 225 ~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~s~~~q~a~~~~l~~~ 296 (409)
T PLN02656 225 GVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKKY-------FD-ILGGPATFIQAAVPTILEQT 296 (409)
T ss_pred HHhcccCcEEEEcccchhccCcceeEEEEEEeCcccccccHHHHHHHHHH-------Hh-hhcCCCHHHHHHHHHHHhcC
Confidence 111111122 26899855544999999983 5777777631 11 12245677888887777521
Q ss_pred hh---ccHHHHHHHHHHHHHhhhhhccCCCcee-EEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE
Q 010250 396 KE---RNIVEQVNKIAPKFQDGVKAFSDSPIIG-EIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR 470 (514)
Q Consensus 396 ~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~-~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~ 470 (514)
.+ ++..+.++++.+.+.+.|+++ +... ..+.. |+++++++....... . ......+...|.++||.+.
T Consensus 297 ~~~~~~~~~~~~~~~r~~~~~~L~~~---~~~~~~~~p~gg~~~w~~l~~~~~~~--~---~~~~~~~~~~l~~~gV~v~ 368 (409)
T PLN02656 297 DESFFKKTINILKQSSDICCDRIKEI---PCITCPHKPEGSMAVMVKLNLSLLED--I---SDDIDFCFKLAREESVIIL 368 (409)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhC---CCCcCCcCCCeEEEEEEecchhhcCC--C---CCHHHHHHHHHHhCCEEEe
Confidence 11 223556666677777777664 2211 12233 566777764321000 0 0012234567788999999
Q ss_pred eeC-----CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 471 VSG-----DNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 471 ~~g-----~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
|+. +.+||+ +..+++++++++++|++++.+.
T Consensus 369 pg~~fg~~~~iRi~--~~~~~e~l~eal~rl~~~~~~~ 404 (409)
T PLN02656 369 PGTAVGLKNWLRIT--FAADPSSLEEALGRIKSFYLRH 404 (409)
T ss_pred cchhcCCCCeEEEE--eCCCHHHHHHHHHHHHHHHHHh
Confidence 762 479999 5678999999999999988654
No 145
>PRK08363 alanine aminotransferase; Validated
Probab=99.84 E-value=3e-18 Score=177.65 Aligned_cols=346 Identities=11% Similarity=0.113 Sum_probs=203.9
Q ss_pred CCCEEEEccCCcccc-cCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc----C-cCCCCeEEEeCCh
Q 010250 98 NGKKYLDSLAGLWCT-ALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----T-ASKMAKVFFTNSG 171 (514)
Q Consensus 98 dG~~ylD~~s~~~~~-~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~----~-~~~~~~v~~~~sG 171 (514)
+|+.++|+..|.... .++ .++.+.+++.+.+......+. +.....+|.+.+++++ + ..+.+++++++|+
T Consensus 28 ~~~~~i~l~~g~p~~~~~~-p~~~~~~~~~~~~~~~~~~Y~----~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~ 102 (398)
T PRK08363 28 KGIKVIRLNIGDPVKFDFQ-PPEHMKEAYCRAIKEGHNYYG----PSEGLPELREAIVKREKRKNGVDITPDDVRVTAAV 102 (398)
T ss_pred cCCCeEEEeCCCCCcCCCC-CCHHHHHHHHHHHHcCCCCCC----CCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCH
Confidence 467899998886432 344 478899999888764321111 1223345555555554 2 2355789999999
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhH
Q 010250 172 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE 251 (514)
Q Consensus 172 seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (514)
++|+..++.... ..++.|++.+++|.+........+...... + ..+ ++.|.
T Consensus 103 ~~al~~~~~~~~--------~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~-------~---~~~-~~~~~---------- 153 (398)
T PRK08363 103 TEALQLIFGALL--------DPGDEILIPGPSYPPYTGLVKFYGGVPVEY-------R---TIE-EEGWQ---------- 153 (398)
T ss_pred HHHHHHHHHHhC--------CCCCEEEEcCCCCcchHHHHHHcCCEEEEe-------c---ccc-ccCCc----------
Confidence 999999987663 345789999999987643332222211100 0 000 00000
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCC
Q 010250 252 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI 331 (514)
Q Consensus 252 ~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv 331 (514)
.+.+++++.+. ++....+++.| ++.+|.+. +.+.+++|.++|++||+++|+||+|..+-..+.........-
T Consensus 154 ---~d~~~l~~~~~---~~~~~v~l~~p-~NPtG~~~-~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~ 225 (398)
T PRK08363 154 ---PDIDDIRKKIT---EKTKAIAVINP-NNPTGALY-EKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTK 225 (398)
T ss_pred ---CCHHHHHhhCC---cceEEEEEECC-CCCCCcCc-CHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCc
Confidence 11355655543 23334455555 55566554 567899999999999999999999986633332111111111
Q ss_pred CCchh---chhhhhcCCcccceeEEe--CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHH
Q 010250 332 KPDLV---SFAKALSSAYMPIGAILV--SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQV 404 (514)
Q Consensus 332 ~pDiv---~~sK~l~gG~~pig~v~~--~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~ 404 (514)
...++ +|||.++.+++++|++++ ++++++.+.... .. ....+++.+.++..++.++|+...+ ++..+++
T Consensus 226 ~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~~---~~-~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~ 301 (398)
T PRK08363 226 DVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREAI---DK-LARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKL 301 (398)
T ss_pred CCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHHHH---HH-HhcccccCChHHHHHHHHHHhCChHHHHHHHHHH
Confidence 12233 789986544499999997 666666554210 00 0112355677777777777742111 2345667
Q ss_pred HHHHHHHHhhhhhccCCCceeEEEeeee-eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-------CEE
Q 010250 405 NKIAPKFQDGVKAFSDSPIIGEIRGTGL-ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-------DNI 476 (514)
Q Consensus 405 ~~~~~~l~~~L~~l~~~~~~~~v~g~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-------~~i 476 (514)
+++.+++.+.|+++ +.+......|. ++++.+....... ..+.+...|.++||.+.++. ++|
T Consensus 302 ~~~~~~l~~~L~~~---~~~~~~~p~g~~~~~~~l~~~~~~~--------~~~~~~~~l~~~gV~v~~g~~f~~~~~~~i 370 (398)
T PRK08363 302 KERRDYIYKRLNEI---PGISTTKPQGAFYIFPRIEEGPWKD--------DKEFVLDVLHEAHVLFVHGSGFGEYGAGHF 370 (398)
T ss_pred HHHHHHHHHHHhcC---CCCEecCCCeEEEEEEEeccCCCCC--------HHHHHHHHHHhCCEEEeCchhhCCCCCCeE
Confidence 77777777777654 22222233444 4444665311000 12223455688999998642 469
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 477 MMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 477 Ri~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
|++ +..+++++++++++|.+++.+
T Consensus 371 Ris--~~~~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 371 RLV--FLPPVEILEEAMDRFEEFMRE 394 (398)
T ss_pred EEE--ecCCHHHHHHHHHHHHHHHHH
Confidence 999 567899999999999988765
No 146
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.83 E-value=3.6e-18 Score=176.20 Aligned_cols=335 Identities=16% Similarity=0.161 Sum_probs=200.8
Q ss_pred EEEEccCCcccccCCCCCHHHHHHHHHHHhc-CCccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHHHH
Q 010250 101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNT-LPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDTQ 178 (514)
Q Consensus 101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~-~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~~A 178 (514)
.++||..|.. .++ .+|++.+++.+.+.. ...| ....+.......+++.+....+ ....+++++++|+++|+..+
T Consensus 30 ~~i~l~~g~p--~~~-~~~~~~~~~~~~~~~~~~~Y-~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~ 105 (384)
T PRK06348 30 DIIDLSLGDP--DLI-TDESIINAAFEDAKKGHTRY-TDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLA 105 (384)
T ss_pred CcEEcCCCCC--CCC-CCHHHHHHHHHHHhcCCCCC-CCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHH
Confidence 4688877632 344 367787776665433 2222 1111122333344444433321 23568999999999999999
Q ss_pred HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250 179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258 (514)
Q Consensus 179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (514)
+.... .+++.|++.+++|.+........+.... .++..+. +.+ ..+++
T Consensus 106 ~~~~~--------~~gd~vlv~~p~y~~~~~~~~~~g~~~~-------------~~~~~~~----------~~~-~~d~~ 153 (384)
T PRK06348 106 LQSIL--------DPGDEVIIHEPYFTPYKDQIEMVGGKPI-------------ILETYEE----------DGF-QINVK 153 (384)
T ss_pred HHHhc--------CCCCEEEEeCCCCcchHHHHHHcCCEEE-------------EecCCcC----------cCC-cCCHH
Confidence 88763 3456899999999876543333222111 0110000 000 01246
Q ss_pred HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccccee-cccCCCCchh-
Q 010250 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC-DKYSIKPDLV- 336 (514)
Q Consensus 259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~-~~~gv~pDiv- 336 (514)
++++.+. ++..+.++..| ++.+|.+. +.+.+++|.++|++||+++|.||+|.+|...+..... ...+..+.++
T Consensus 154 ~l~~~~~---~~~~~v~l~~p-~NPtG~~~-s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~ 228 (384)
T PRK06348 154 KLEALIT---SKTKAIILNSP-NNPTGAVF-SKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTIT 228 (384)
T ss_pred HHHHhhC---cCccEEEEeCC-CCCCCcCC-CHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEE
Confidence 7777664 22234444545 55666554 6788999999999999999999999987432221111 1112222332
Q ss_pred --chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH
Q 010250 337 --SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQ 412 (514)
Q Consensus 337 --~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~ 412 (514)
+|||.++..++++|++++++++++.+.. .....+++.++++..++..+|+..++ +.+.+.++++.+.+.
T Consensus 229 ~~SfSK~~~l~GlRiG~~v~~~~~~~~~~~-------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~ 301 (384)
T PRK06348 229 FGSFSKDFAMTGWRIGYVIAPDYIIETAKI-------INEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAY 301 (384)
T ss_pred EecchhccCCccccceeeecCHHHHHHHHH-------HHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 6899887323899999999999888763 12234567788888888777753221 234556666777777
Q ss_pred hhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEeeC-------CEEEEeCCCC
Q 010250 413 DGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG-------DNIMMSPPFI 483 (514)
Q Consensus 413 ~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g-------~~iRi~p~~~ 483 (514)
+.|+.+ +.+..... -|.++++.+..... ....++..|+ +.||.+.++. +.||++ +.
T Consensus 302 ~~L~~~---~~~~~~~p~gg~~~~~~~~~~~~----------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~--~~ 366 (384)
T PRK06348 302 KRIESI---PNLSLHPPKGSIYAFINIKKTGL----------SSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLA--CT 366 (384)
T ss_pred HHHhcC---CCceeccCCeeEEEEEecccCCC----------CHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEE--ec
Confidence 777654 22222223 35566777753211 1345777776 5799998642 469999 56
Q ss_pred CCHHHHHHHHHHHHH
Q 010250 484 MSPEEVDELISKYGK 498 (514)
Q Consensus 484 ~t~e~id~~~~~l~~ 498 (514)
.+++++++++++|.+
T Consensus 367 ~~~~~l~~al~~l~~ 381 (384)
T PRK06348 367 VGIEVLEEAFNRIEK 381 (384)
T ss_pred CCHHHHHHHHHHHHh
Confidence 789999999998865
No 147
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.83 E-value=1.5e-18 Score=178.46 Aligned_cols=326 Identities=13% Similarity=0.128 Sum_probs=201.3
Q ss_pred CCCCCHHHHHHHHHHHhcCCcc-cc-cc---ccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhh
Q 010250 114 LGGSEPRLVAAATAQLNTLPFY-HS-FW---NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNA 188 (514)
Q Consensus 114 lGh~~p~v~~A~~~~l~~~~~~-~~-~~---~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~ 188 (514)
.|..+|.+.+++.+.++..... ++ .+ ........++.+.+++++.....+++++++|+++|+..+++.+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~---- 83 (373)
T cd06453 8 TSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGR---- 83 (373)
T ss_pred ccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhh----
Confidence 5667899999999887543211 11 10 011234456778888888533256899999999999999987641
Q ss_pred cCCCCccEEEEEecCCccccee---eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHH
Q 010250 189 LGRPNKKKFIARQKSYHGSTLI---AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLIL 265 (514)
Q Consensus 189 ~~~~~~~~ii~~~~~yHG~t~~---~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~ 265 (514)
...++++||+.+..|.+.... .....|.. +..++....+ ..+++++++.+.
T Consensus 84 -~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~-------------~~d~~~l~~~l~ 137 (373)
T cd06453 84 -ANKPGDEIVTSVMEHHSNIVPWQQLAERTGAK------------LKVVPVDDDG-------------QLDLEALEKLLT 137 (373)
T ss_pred -cCCCCCEEEECcchhHHHHHHHHHHHhhcCcE------------EEEeecCCCC-------------CcCHHHHHHHhc
Confidence 001346788877666542110 01011111 0111111000 012577777764
Q ss_pred HhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhc
Q 010250 266 KEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALS 343 (514)
Q Consensus 266 ~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~ 343 (514)
+++.+|++..+++..|.+.+ +++|.++|++||+++|+|++++ +|.. ........+|++++| |.++
T Consensus 138 ----~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~~ 204 (373)
T cd06453 138 ----ERTKLVAVTHVSNVLGTINP----VKEIGEIAHEAGVPVLVDGAQS-AGHM----PVDVQDLGCDFLAFSGHKMLG 204 (373)
T ss_pred ----CCceEEEEeCcccccCCcCC----HHHHHHHHHHcCCEEEEEhhhh-cCce----eeeccccCCCEEEeccccccC
Confidence 35678888777778898877 8999999999999999999987 4332 122223457998887 9987
Q ss_pred CCcccceeEEeCHHHHHHhhhccCCC---Ccc-cccC----------CCCCcHHHHHHHHHHHHHHhhcc---HHHHHHH
Q 010250 344 SAYMPIGAILVSPEVSEVIHSQSNTL---GSF-SHGF----------TYSGHPVSCAVAIEALKIYKERN---IVEQVNK 406 (514)
Q Consensus 344 gG~~pig~v~~~~~i~~~l~~~~~~~---~~~-~~~~----------t~~~~pl~~aaa~aal~~~~~~~---~~~~~~~ 406 (514)
+ .++|++++++++++.+.+..... ... .... ....+..+..+..++++.+.+.+ +.++.++
T Consensus 205 ~--~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~ 282 (373)
T cd06453 205 P--TGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHE 282 (373)
T ss_pred C--CCcEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 6 56899999999887775321000 000 0000 01233344555556777776543 4666777
Q ss_pred HHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------------C
Q 010250 407 IAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------------G 473 (514)
Q Consensus 407 ~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------------g 473 (514)
+.+++++.|+++....++......+.++.+.+... ....+.+.|.++||.+.++ .
T Consensus 283 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~ 350 (373)
T cd06453 283 LTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEGI------------HPHDVATILDQYGIAVRAGHHCAQPLMRRLGVP 350 (373)
T ss_pred HHHHHHHHHhcCCCeEEeCCccccCCeEEEEECCc------------CHHHHHHHHHHCCEEeccCccchhHHHHHhCCC
Confidence 77888888876522222222223455666665421 1346778899999988632 2
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHH
Q 010250 474 DNIMMSPPFIMSPEEVDELISKY 496 (514)
Q Consensus 474 ~~iRi~p~~~~t~e~id~~~~~l 496 (514)
+.||+++...+|++|+|++++.|
T Consensus 351 ~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 351 GTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred CeEEEEecCCCCHHHHHHHHhhC
Confidence 47999999999999999999864
No 148
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.83 E-value=1.3e-18 Score=177.48 Aligned_cols=322 Identities=14% Similarity=0.216 Sum_probs=199.4
Q ss_pred CHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC-CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccE
Q 010250 118 EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK-MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 196 (514)
Q Consensus 118 ~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~-~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ 196 (514)
+|.|.+++..... +....+ .+...++.+.++++++... ...+++++||+++++.++.... +++++
T Consensus 11 ~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~--------~~~~~ 76 (355)
T TIGR03301 11 SATVRDAMLVDWC---HWDSEF---NDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV--------PRDGK 76 (355)
T ss_pred CHHHHHHhhhhcc---CCCHHH---HHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc--------CCCCe
Confidence 5666666655221 111111 2566788889999875322 2368889999999999998763 33467
Q ss_pred EEEEecCCcccceee-eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEE
Q 010250 197 FIARQKSYHGSTLIA-ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAF 275 (514)
Q Consensus 197 ii~~~~~yHG~t~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aav 275 (514)
+|+.++++++..... ...-|.+. ..++.++.+ ..+.+++++.+.+. .++..+
T Consensus 77 vi~~~~~~~~~~~~~~a~~~g~~~------------~~i~~~~~~-------------~~d~~~l~~~l~~~--~~~~~v 129 (355)
T TIGR03301 77 LLVLINGAYGERLAKICEYLGIPH------------TDLNFSEYE-------------PPDLNRIEEALAAD--PDITHV 129 (355)
T ss_pred EEEECCCchhhHHHHHHHHcCCce------------EEEecCCCC-------------CCCHHHHHHHHHhC--CCceEE
Confidence 777777777653211 11111111 111111110 01157788877542 234445
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccceeEE
Q 010250 276 IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAIL 353 (514)
Q Consensus 276 ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pig~v~ 353 (514)
++-..++.+|.+.| +++|.++|++||+++|+|++++ +|.. .+....++ .|++ +++|+++|+ ..+|+++
T Consensus 130 ~~~~~~~~~G~~~~----~~~i~~l~~~~~~~livD~~~s-~g~~--~~~~~~~~--~d~~~~s~~K~l~~~-~G~g~~~ 199 (355)
T TIGR03301 130 ATVHHETTTGILNP----LEAIAKVARSHGAVLIVDAMSS-FGAI--PIDIEELD--VDALIASANKCLEGV-PGFGFVI 199 (355)
T ss_pred EEEecCCcccchhH----HHHHHHHHHHcCCEEEEEeccc-cCCc--ccchhhcC--ccEEEecCCcccccC-CceeEEE
Confidence 44445566788876 8999999999999999999887 6532 22333333 4554 677998765 4579999
Q ss_pred eCHHHHHHhhhccCCCC-cc---------cccCCCCCcHHHHHHHHHHHHHHhhcc----HHHHHHHHHHHHHhhhhhcc
Q 010250 354 VSPEVSEVIHSQSNTLG-SF---------SHGFTYSGHPVSCAVAIEALKIYKERN----IVEQVNKIAPKFQDGVKAFS 419 (514)
Q Consensus 354 ~~~~i~~~l~~~~~~~~-~~---------~~~~t~~~~pl~~aaa~aal~~~~~~~----~~~~~~~~~~~l~~~L~~l~ 419 (514)
+++++++.+........ .+ .....+..++.++.++.++++.+.+++ ..++++++.+++++.|+++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~- 278 (355)
T TIGR03301 200 ARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL- 278 (355)
T ss_pred ECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-
Confidence 99999888752110000 00 001234567777777788888775433 4567788888999988775
Q ss_pred CCCceeE-EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC----CEEEEeCCCCCCHHHHHHHHH
Q 010250 420 DSPIIGE-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG----DNIMMSPPFIMSPEEVDELIS 494 (514)
Q Consensus 420 ~~~~~~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g----~~iRi~p~~~~t~e~id~~~~ 494 (514)
...++.. ....+.++.+.++.... . ....+.+.|.++|+++.+.+ +.|||+++..++++|++++++
T Consensus 279 g~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~ 349 (355)
T TIGR03301 279 GFQPLLPERWQSPIIVSFLYPDDPD-F--------DFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLE 349 (355)
T ss_pred CCeeecCCCCCCCcEEEEECCCCCc-c--------hHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHH
Confidence 2222211 12234455666543110 0 13468889999999998753 579999988899999999999
Q ss_pred HHHHHH
Q 010250 495 KYGKAL 500 (514)
Q Consensus 495 ~l~~~l 500 (514)
.|++++
T Consensus 350 ~l~~~~ 355 (355)
T TIGR03301 350 AIKDAL 355 (355)
T ss_pred HHHhhC
Confidence 998753
No 149
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.83 E-value=1.4e-18 Score=181.76 Aligned_cols=343 Identities=15% Similarity=0.109 Sum_probs=209.4
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-ccccc----cCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFWN----RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE 173 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~~~~~----~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse 173 (514)
+..|||..+. |..++.|.+++.+.+...... +.... ...+...++.+.++++++....++|+|++++++
T Consensus 32 ~~iyLd~a~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 105 (424)
T PLN02855 32 KLVYLDNAAT------SQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATE 105 (424)
T ss_pred CeEEeeCccc------cCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHH
Confidence 3578886332 446788999998877543211 11000 012234577788888885433478999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee---ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChh
Q 010250 174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA---SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 250 (514)
Q Consensus 174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~---~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (514)
++..+++...... - ..+++|++.+..|++...... ...|... ..++.... +
T Consensus 106 al~~i~~~~~~~~---~-~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v------------~~v~~~~~------~---- 159 (424)
T PLN02855 106 AINLVAYTWGLAN---L-KPGDEVILSVAEHHSNIVPWQLVAQKTGAVL------------KFVGLTPD------E---- 159 (424)
T ss_pred HHHHHHHHhhhhc---C-CCcCEEEECCCccHHHHHHHHHHHHHcCCEE------------EEEecCCC------C----
Confidence 9998887531000 1 234678888777765321111 0111111 01111000 0
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccC
Q 010250 251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS 330 (514)
Q Consensus 251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~g 330 (514)
..+.+++++.+. .++.+|++..+++.+|.+.| +++|.++|+++|+++|+|++|. +|.. .++...
T Consensus 160 ---~~~~~~l~~~i~----~~t~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~a~~-~g~~----~~~~~~ 223 (424)
T PLN02855 160 ---VLDVEQLKELLS----EKTKLVATHHVSNVLGSILP----VEDIVHWAHAVGAKVLVDACQS-VPHM----PVDVQT 223 (424)
T ss_pred ---CcCHHHHHHHhc----cCceEEEEeCccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCc----CCCchh
Confidence 012467777664 35678888888888999988 8999999999999999999996 5432 122223
Q ss_pred CCCchhc--hhhhhcCCcccceeEEeCHHHHHHhhhccCCCCc----c---------cccCCC-CCcHHHHHHHHHHHHH
Q 010250 331 IKPDLVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS----F---------SHGFTY-SGHPVSCAVAIEALKI 394 (514)
Q Consensus 331 v~pDiv~--~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~----~---------~~~~t~-~~~pl~~aaa~aal~~ 394 (514)
..+|+++ +.| +.|+ ..+|++++++++++.+.+....... + ...... +.+..+.++..++++.
T Consensus 224 ~~~d~~~~s~~K-~~gp-~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~ 301 (424)
T PLN02855 224 LGADFLVASSHK-MCGP-TGIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDY 301 (424)
T ss_pred cCCCEEEeeccc-ccCC-CccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHH
Confidence 3468774 569 4443 3589999999988776432000000 0 000111 2344556666677777
Q ss_pred Hhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEE----EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-C
Q 010250 395 YKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEI----RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-G 466 (514)
Q Consensus 395 ~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v----~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G 466 (514)
+.+ +++.++..++.+++++.|+++....+.... ...+.++.+.+.... ...+...|.++ |
T Consensus 302 ~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~------------~~~v~~~L~~~~g 369 (424)
T PLN02855 302 LSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIH------------PTDLSTFLDQQHG 369 (424)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCcC------------HHHHHHHhcccCC
Confidence 655 345677888888888888765322222211 123456666654211 34577788777 9
Q ss_pred cEEEeeC-------------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 467 MLVRVSG-------------DNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 467 v~~~~~g-------------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
|.++.+. ..||++++...|++||+++++.|+++++.+
T Consensus 370 I~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~ 419 (424)
T PLN02855 370 VAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAFF 419 (424)
T ss_pred EEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHHH
Confidence 9887421 469999999999999999999999988664
No 150
>PRK07777 aminotransferase; Validated
Probab=99.83 E-value=3.3e-18 Score=176.75 Aligned_cols=340 Identities=13% Similarity=0.082 Sum_probs=199.0
Q ss_pred EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-CCCC-eEEEeCChhHHHHHH
Q 010250 101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKMA-KVFFTNSGSEANDTQ 178 (514)
Q Consensus 101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~-~v~~~~sGseA~~~A 178 (514)
.++||..|... .. .++.+.+++.+.+......+....+.......+++.+.+.++. ...+ ++++++||++|+..+
T Consensus 25 ~~i~l~~g~p~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 101 (387)
T PRK07777 25 GAVNLGQGFPD--ED-GPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAA 101 (387)
T ss_pred CeEEccCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHH
Confidence 56898877542 22 3577888887777542211111122223333444444444421 1233 699999999999988
Q ss_pred HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250 179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258 (514)
Q Consensus 179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (514)
+.... .++++|++..++|++........ +.... .++..+. + ..+ ..+++
T Consensus 102 ~~~~~--------~~gd~vli~~p~y~~~~~~~~~~-g~~~~------------~~~~~~~------~---~~~-~~d~~ 150 (387)
T PRK07777 102 VLGLV--------EPGDEVLLIEPYYDSYAAVIAMA-GAHRV------------PVPLVPD------G---RGF-ALDLD 150 (387)
T ss_pred HHHhc--------CCCCEEEEeCCCchhhHHHHHHC-CCEEE------------EeecCCc------c---CCC-cCCHH
Confidence 87542 33568999999998764222211 11100 0111000 0 000 01246
Q ss_pred HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-ceecc-cCCC-Cch
Q 010250 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGCDK-YSIK-PDL 335 (514)
Q Consensus 259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~~~-~gv~-pDi 335 (514)
++++.+. +++.+|++.+.++.+|.+. +++.+++|.++|++||+++|+||+|.++...+.. ..... .+.. .++
T Consensus 151 ~l~~~~~----~~~~~v~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i 225 (387)
T PRK07777 151 ALRAAVT----PRTRALIVNSPHNPTGTVL-TAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTV 225 (387)
T ss_pred HHHHhcC----cccEEEEEcCCCCCCCccC-CHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEE
Confidence 6666553 2455666666677788765 6688999999999999999999999877433321 11111 1211 122
Q ss_pred --hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--hccHHHHHHHHHHHH
Q 010250 336 --VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKIAPKF 411 (514)
Q Consensus 336 --v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~~~~~~~~~~~~~~l 411 (514)
.+|||.++..++++|++++++++++.+... ....++..+...+.++..+++..+ .+.+.+.++++.+.+
T Consensus 226 ~~~S~SK~~g~~GlRiG~~~~~~~l~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l 298 (387)
T PRK07777 226 TISSAAKTFNVTGWKIGWACGPAPLIAAVRAA-------KQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRL 298 (387)
T ss_pred EEeechhhccCcCceeEEEecCHHHHHHHHHH-------HhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence 368999974338999999999998887642 122244444444444444453211 123567788888888
Q ss_pred HhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEeeC----------CEEEEeC
Q 010250 412 QDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG----------DNIMMSP 480 (514)
Q Consensus 412 ~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g----------~~iRi~p 480 (514)
.+.|+++ ..... ...-|.++++.+...... ....+++.|+ ++||.+.++. +.+||+
T Consensus 299 ~~~L~~~-~~~~~--~~~g~~~~~~~~~~~~~~---------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~- 365 (387)
T PRK07777 299 AAGLAEA-GFEVH--DSAGTYFLCADPRPLGYD---------DGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFA- 365 (387)
T ss_pred HHHHHhC-CCCcc--CCCcceEEEecccccCCC---------CHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEE-
Confidence 8888775 22211 111244556665421100 1356788886 5799997641 369999
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q 010250 481 PFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 481 ~~~~t~e~id~~~~~l~~~l 500 (514)
+..+++++++++++|.+..
T Consensus 366 -~~~~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 366 -FCKRDDTLDEAIRRLRALR 384 (387)
T ss_pred -ecCCHHHHHHHHHHHHHHh
Confidence 5668999999999998754
No 151
>PRK09082 methionine aminotransferase; Validated
Probab=99.83 E-value=2.4e-18 Score=177.70 Aligned_cols=337 Identities=12% Similarity=0.063 Sum_probs=204.2
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-CCC-CeEEEeCChhHHHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKM-AKVFFTNSGSEANDT 177 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~-~~v~~~~sGseA~~~ 177 (514)
+.++||..|.. .++ .+|.+.+++.+.++.....+....+..+....+++++.+.+.. .+. +++++++||++|+..
T Consensus 30 ~~~i~l~~g~~--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~ 106 (386)
T PRK09082 30 HGAINLSQGFP--DFD-GPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFA 106 (386)
T ss_pred CCEEEecCCCC--CCC-CCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHH
Confidence 45789887743 233 4788999998877643222222233445566777777766532 122 369999999999999
Q ss_pred HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
+++... ..+++|++.+++|.+........ |... ..++... +.+ ..+.
T Consensus 107 ~~~~~~--------~~gd~Vli~~p~y~~~~~~~~~~-g~~~------------~~~~~~~-----------~~~-~~d~ 153 (386)
T PRK09082 107 AILALV--------RPGDEVIVFDPSYDSYAPAIELA-GGRA------------VRVALQP-----------PDF-RVDW 153 (386)
T ss_pred HHHHHc--------CCCCEEEEeCCCchhhHHHHHHc-CCEE------------EEEecCc-----------ccc-cCCH
Confidence 997653 33568999999887653222211 1111 0111100 000 1124
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc--eecccCCCCch
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF--GCDKYSIKPDL 335 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~--~~~~~gv~pDi 335 (514)
+++++.+. +++.+|++...++.+|.+. +++.+++|.++|++||+++|+||+|..+-..+..+ .....+..+.+
T Consensus 154 ~~l~~~~~----~~~~~v~l~~p~NPtG~~~-~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~ 228 (386)
T PRK09082 154 QRFAAAIS----PRTRLIILNTPHNPSGTVW-SAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERA 228 (386)
T ss_pred HHHHHhcC----ccceEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcE
Confidence 56666653 2345555555566677554 46789999999999999999999998663333211 11222222233
Q ss_pred h---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHH
Q 010250 336 V---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPK 410 (514)
Q Consensus 336 v---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~ 410 (514)
+ +|||.++..++++|++++++++++.+... .....++.+.+++.++.+.++...+ +++.+.++++.+.
T Consensus 229 i~~~S~SK~~~~~G~RiG~iv~~~~l~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 301 (386)
T PRK09082 229 FVVSSFGKTYHVTGWKVGYCVAPAALSAEFRKV-------HQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDR 301 (386)
T ss_pred EEEeechhhccchhhhhhhhhCCHHHHHHHHHH-------HhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 3 68999864349999999999999888642 1123455667776666555542111 2245566777788
Q ss_pred HHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH-HHCCcEEEeeC---------CEEEEeC
Q 010250 411 FQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVSG---------DNIMMSP 480 (514)
Q Consensus 411 l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~g---------~~iRi~p 480 (514)
+.+.|++. .... ....-|.++++++.+.... -...+++.| .++||.+.|+. +.+||+
T Consensus 302 ~~~~L~~~-~~~~--~~~~g~~~~~~~~~~~~~~---------~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~- 368 (386)
T PRK09082 302 FRAALANS-RFKL--LPCEGTYFQLVDYSAISDL---------DDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLC- 368 (386)
T ss_pred HHHHHHhC-CCcc--cCCCeeEEEEEeccccCCC---------CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEE-
Confidence 88888764 1111 1122355677777531100 134576765 57899988641 469999
Q ss_pred CCCCCHHHHHHHHHHHHH
Q 010250 481 PFIMSPEEVDELISKYGK 498 (514)
Q Consensus 481 ~~~~t~e~id~~~~~l~~ 498 (514)
+..+++++++++++|++
T Consensus 369 -~~~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 369 -FAKQEETLDAAAERLCQ 385 (386)
T ss_pred -ecCCHHHHHHHHHHHhh
Confidence 56789999999998864
No 152
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.83 E-value=7.1e-18 Score=175.30 Aligned_cols=350 Identities=13% Similarity=0.083 Sum_probs=205.6
Q ss_pred EeCCCCEEEEccCCcccccCCC--CCHHHHHHHHHHHhcCC--ccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeC
Q 010250 95 YDVNGKKYLDSLAGLWCTALGG--SEPRLVAAATAQLNTLP--FYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTN 169 (514)
Q Consensus 95 ~d~dG~~ylD~~s~~~~~~lGh--~~p~v~~A~~~~l~~~~--~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~ 169 (514)
-..+|+..|++.-|.. ..+|+ .+|.+.+++.+.++... .|... .+..+....+++.+....+ ....++|++++
T Consensus 27 ~~~~~~~~i~l~~G~p-~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~-~G~~~lr~aia~~~~~~~g~~~~~~~I~it~ 104 (409)
T PLN00143 27 NEDDHRLAISFGFGDP-SCFECFRTTNIAEDAIVEAVRSAKFNSYAPT-GGILPARRAIADYLSNDLPYQLSPDDVYLTL 104 (409)
T ss_pred ccCCCCceeeCCCCCC-CCCCCCCCCHHHHHHHHHHHhCcCCCCCCCC-CCCHHHHHHHHHHHHhhcCCCCCHhhEEEec
Confidence 3456888999987743 22232 67888899988887532 12111 2233334444444433321 23557899999
Q ss_pred ChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcccCCCCCC
Q 010250 170 SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYWRYAHPGE 247 (514)
Q Consensus 170 sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 247 (514)
++++|+..+++... ..++.|++.+++|.+........+.... .++. .+.|+
T Consensus 105 G~~~al~~~~~~l~--------~~gd~v~v~~P~y~~~~~~~~~~g~~~~-------------~~~~~~~~~~~------ 157 (409)
T PLN00143 105 GCKHAAEIIIKVLA--------RPEANILLPRPGFPDVETYAIFHHLEIR-------------HFDLLPEKGWE------ 157 (409)
T ss_pred ChHHHHHHHHHHHc--------CCCCEEEEcCCCCcCHHHHHHHcCCEEE-------------EEeccCCCCCc------
Confidence 99999999988663 3357899999999876433222111100 0000 00011
Q ss_pred ChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-ee
Q 010250 248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GC 326 (514)
Q Consensus 248 ~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~ 326 (514)
.++++|++++. ++..+.+++.|. +.+|.+. +.+.+++|.++|++||+++|+||+|..|-..+..+ ..
T Consensus 158 -------~d~~~l~~~~~---~~~~~~~~~nP~-NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~ 225 (409)
T PLN00143 158 -------VDLDAVEAIAD---ENTIAMVIINPG-NPCGSVY-SYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPM 225 (409)
T ss_pred -------CCHHHHHHhcc---cCCEEEEEECCC-CCCCCcc-CHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcch
Confidence 11466766553 345677888884 5556554 67889999999999999999999999874444321 11
Q ss_pred cccCCCCchh---chhhhhcCCcccceeEEeC-H-HHH------HHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH
Q 010250 327 DKYSIKPDLV---SFAKALSSAYMPIGAILVS-P-EVS------EVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY 395 (514)
Q Consensus 327 ~~~gv~pDiv---~~sK~l~gG~~pig~v~~~-~-~i~------~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~ 395 (514)
..+.-.+.++ +|||.++..++++|+++++ + .+. +.+.. ......+ .+.+++.++.++|+.-
T Consensus 226 ~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~q~a~~~~l~~~ 297 (409)
T PLN00143 226 GLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKK-------ALNPAPF-PPTFIQAAIPEILEKT 297 (409)
T ss_pred hhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHHHHHHHH-------HHhccCC-CCchHHHHHHHHHhcC
Confidence 1121112232 6899855544999999983 3 332 22221 1111222 3566777777666521
Q ss_pred -h--hccHHHHHHHHHHHHHhhhhhccCCCcee--EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHH-HHHHHCCcEE
Q 010250 396 -K--ERNIVEQVNKIAPKFQDGVKAFSDSPIIG--EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFG-AQCEKHGMLV 469 (514)
Q Consensus 396 -~--~~~~~~~~~~~~~~l~~~L~~l~~~~~~~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~Gv~~ 469 (514)
. -++..+.+++..+.+.+.|+++ +... ....-|.++++++....... ......+. ..+.++||.+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~L~~~---~~~~~~~~p~gg~f~w~~l~~~~~~~------~~~~~~~~~~ll~~~gV~v 368 (409)
T PLN00143 298 TEDFFSKTINILRAALAFCYDKLKEI---PCIMCPQKAEGAFFALVKLNLLLLED------IEDDMEFCLKLAKEESLII 368 (409)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcC---CCCCCCCCCCeeEEEEEecchhhcCC------CCCHHHHHHHHHHhCCEEE
Confidence 1 0223555666666666666554 2211 11223677888875321000 00022343 4557899999
Q ss_pred EeeC-----CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 470 RVSG-----DNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 470 ~~~g-----~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
.++. +++||+ +..+++++++++++|.+++++..
T Consensus 369 ~pg~~f~~~~~iRi~--~~~~~~~l~~al~rl~~~l~~~~ 406 (409)
T PLN00143 369 LPGVTVGLKNWLRIT--FAVEQSSLEDGLGRLKSFCGRHA 406 (409)
T ss_pred eCccccCCCCeEEEE--EcCCHHHHHHHHHHHHHHHHHhc
Confidence 9753 579999 66789999999999999886543
No 153
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.83 E-value=4.1e-18 Score=176.97 Aligned_cols=321 Identities=15% Similarity=0.118 Sum_probs=192.2
Q ss_pred CHHHHHHHHHHH-hcCCc---cccccccCCchHHHHHH----HHHHhcCcCCCCeEE-EeCChhHHHHHHHHHHHHHHhh
Q 010250 118 EPRLVAAATAQL-NTLPF---YHSFWNRTTKPSLDLAK----ELLEMFTASKMAKVF-FTNSGSEANDTQVKLVWYYNNA 188 (514)
Q Consensus 118 ~p~v~~A~~~~l-~~~~~---~~~~~~~~~~~~~ela~----~L~~~~~~~~~~~v~-~~~sGseA~~~Alk~a~~~~~~ 188 (514)
||++++|+...+ .++.. +++.+++ ++...+|++ +++++++ .+.++ +++||+.|+.+++....
T Consensus 41 ~p~v~~a~~~~~~~~~~~g~~gsr~~~G-~~~~~~lE~~~~~~la~l~g---~~~alv~~~SG~~A~~~~l~al~----- 111 (416)
T PRK13034 41 SPAVMEAQGSVLTNKYAEGYPGKRYYGG-CEFVDEVEALAIERAKQLFG---CDYANVQPHSGSQANGAVYLALL----- 111 (416)
T ss_pred CHHHHHHhcchhhcCCCCCCCCCcccCC-ChHHHHHHHHHHHHHHHHhC---CCceEEecCCcHHHHHHHHHHhc-----
Confidence 899999999985 65433 3445555 577888988 9999883 34674 56999999999997663
Q ss_pred cCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC
Q 010250 189 LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG 268 (514)
Q Consensus 189 ~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~ 268 (514)
..+++|++.+.+|.+....+...+....... ....+.. . .....+++++++++...
T Consensus 112 ---~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~--------~~~~~~~--------~----~~~~~d~~~le~~l~~~- 167 (416)
T PRK13034 112 ---KPGDTILGMSLSHGGHLTHGAKVSLSGKWYN--------AVQYGVD--------R----LTGLIDYDEVEELAKEH- 167 (416)
T ss_pred ---CCCCEEEEcCccceeeeecCCcceeccceee--------eEEcccc--------c----ccCCcCHHHHHHHHhhc-
Confidence 3446777766655442221111110000000 0000000 0 00012357788777542
Q ss_pred CCcEEEEEE-ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCC
Q 010250 269 PETIAAFIA-EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSA 345 (514)
Q Consensus 269 ~~~~aaviv-Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG 345 (514)
+..+|++ ++++|. ..+ +++|.++|++||++||+|++|+ +|-.+........+ ..|++ +++|+|+|+
T Consensus 168 --~~klVi~~~~~~g~---~~d----l~~l~~la~~~g~~livD~Aha-~G~~~~g~~~~~~~-~~Di~~~s~~K~l~g~ 236 (416)
T PRK13034 168 --KPKLIIAGFSAYPR---ELD----FARFREIADEVGALLMVDMAHI-AGLVAAGEHPNPFP-HAHVVTTTTHKTLRGP 236 (416)
T ss_pred --CCeEEEECCCcccc---ccC----HHHHHHHHHHcCCEEEEeCccc-ccCcccCCCCCCCC-CceEEEEeCcccCCCC
Confidence 3456676 566553 334 8899999999999999999997 66655322111111 36766 467999764
Q ss_pred cccceeEEeCHH-HHHHhhhccCCCCcccccCCCCCcH-HHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHhhhhhccCC
Q 010250 346 YMPIGAILVSPE-VSEVIHSQSNTLGSFSHGFTYSGHP-VSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDGVKAFSDS 421 (514)
Q Consensus 346 ~~pig~v~~~~~-i~~~l~~~~~~~~~~~~~~t~~~~p-l~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~ 421 (514)
.-|+++++++ +.+.+.. ...++.+-+..| ..++++++.++.++. .++.+++.++.++|++.|+++ +.
T Consensus 237 --~GG~v~~~~~~~~~~~~~------~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~ 307 (416)
T PRK13034 237 --RGGMILTNDEEIAKKINS------AVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GY 307 (416)
T ss_pred --CCeEEEECcHHHHHHHHh------hcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 2366667654 4444432 111221112223 333344444555432 245789999999999999876 33
Q ss_pred CceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe-----------eCCEEEEeCCC----CCCH
Q 010250 422 PIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV-----------SGDNIMMSPPF----IMSP 486 (514)
Q Consensus 422 ~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~-----------~g~~iRi~p~~----~~t~ 486 (514)
++... .....+..+.+.+... ....+.+.|.+.||++.. ....||++++. .+++
T Consensus 308 ~~~~~-~~~t~i~~v~~~~~~~----------~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~ 376 (416)
T PRK13034 308 DLVSG-GTDNHLLLVDLRPKGL----------SGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGE 376 (416)
T ss_pred EeccC-CCCCcEEEEEcCCCCC----------CHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCH
Confidence 33211 1244556666654321 133455788889999974 12469999888 7789
Q ss_pred HHHHHHHHHHHHHHHH
Q 010250 487 EEVDELISKYGKALKA 502 (514)
Q Consensus 487 e~id~~~~~l~~~l~~ 502 (514)
+||+++++.|.+++..
T Consensus 377 ~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 377 AEFREIANWILDVLDD 392 (416)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999988863
No 154
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.83 E-value=6.2e-18 Score=175.32 Aligned_cols=336 Identities=16% Similarity=0.194 Sum_probs=199.7
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC----cCCCCeEEEeCChhHH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT----ASKMAKVFFTNSGSEA 174 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~----~~~~~~v~~~~sGseA 174 (514)
|..++||.+|.. .++ .++.+.+++.+.......|. +.....++.+.+++++. +.+.++++++++|++|
T Consensus 29 ~~~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~~~Y~-----~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~a 100 (397)
T PRK07568 29 GIKVYHLNIGQP--DIK-TPEVFFEAIKNYDEEVLAYS-----HSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEA 100 (397)
T ss_pred CCCEEEecCCCC--CCC-CCHHHHHHHHHHhcCCcCcC-----CCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHH
Confidence 345778766632 233 36778888876654322221 12223455555555542 2356789999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250 175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254 (514)
Q Consensus 175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
+..++...+ ..+++|++.++.|........ ..|... ..++.... +.+..
T Consensus 101 l~~~~~~l~--------~~gd~Vl~~~p~y~~~~~~~~-~~g~~~------------~~v~~~~~----------~g~~~ 149 (397)
T PRK07568 101 ILFAMMAIC--------DPGDEILVPEPFYANYNGFAT-SAGVKI------------VPVTTKIE----------EGFHL 149 (397)
T ss_pred HHHHHHHhc--------CCCCEEEEecCCCccHHHHHH-HcCCEE------------EEeecCcc----------cCCCC
Confidence 999887653 234678888888876432111 111110 00111000 00000
Q ss_pred HHHHHHHHHHHHhCCCcEEEE-EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-ee-cccCC
Q 010250 255 RLANNLEDLILKEGPETIAAF-IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GC-DKYSI 331 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aav-ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~-~~~gv 331 (514)
.+.+++++.+. .++.+| ++.| ++.+|.+. +.+.+++|.++|+++|+++|+||++.+|...+... .. ...+.
T Consensus 150 ~~~~~l~~~~~----~~~~~v~i~~p-~NPtG~~~-~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~ 223 (397)
T PRK07568 150 PSKEEIEKLIT----PKTKAILISNP-GNPTGVVY-TKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGL 223 (397)
T ss_pred CCHHHHHHhcC----ccceEEEEECC-CCCCCccC-CHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCC
Confidence 01355666553 234444 4555 55567544 56779999999999999999999999886555321 11 11222
Q ss_pred CCchh---chhhhhcCCcccceeEEeC-HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--hccHHHHHH
Q 010250 332 KPDLV---SFAKALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVN 405 (514)
Q Consensus 332 ~pDiv---~~sK~l~gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~~~~~~~~~ 405 (514)
.+.++ +|||.++..++++|+++++ +++++.+... .. .+++.+.+.+.++.++|+..+ -+++.+.++
T Consensus 224 ~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~-------~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~ 295 (397)
T PRK07568 224 EDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKL-------CQ-ARLSPPTLEQIGAAALLDTPESYFDEVREEYK 295 (397)
T ss_pred cCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHH-------hh-ccCCCCcHHHHHHHHHhhCCHHHHHHHHHHHH
Confidence 33343 6899988533899999984 7788776531 11 235566777777776665211 123456677
Q ss_pred HHHHHHHhhhhhccCCCceeEEEeee-eeEEEEEccCCCCCCCCCCccchHHHHHHHHHH------CCcEEEee------
Q 010250 406 KIAPKFQDGVKAFSDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK------HGMLVRVS------ 472 (514)
Q Consensus 406 ~~~~~l~~~L~~l~~~~~~~~v~g~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~Gv~~~~~------ 472 (514)
++.+.+.+.|+++ +.+......| .++++.+.... ...+...|.+ +||.+.++
T Consensus 296 ~~~~~l~~~L~~~---~~~~~~~p~g~~~~~~~l~~~~------------~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~ 360 (397)
T PRK07568 296 KRRDILYEELNKI---PGVVCEKPKGAFYIIAKLPVDD------------AEDFAKWLLTDFNYNGETVMVAPASGFYAT 360 (397)
T ss_pred HHHHHHHHHHhcC---CCceecCCCcceEEEEecCCCC------------HHHHHHHHHhhcccccceEEEeCchHhcCC
Confidence 7777788877664 2222223334 45566664311 3346666654 58998863
Q ss_pred ----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 473 ----GDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 473 ----g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
.+.||++ +..+++++++++++|.+++++..
T Consensus 361 ~~~~~~~iRls--~~~~~~~~~~~~~~l~~~l~~~~ 394 (397)
T PRK07568 361 PGLGKNEIRIA--YVLNEEDLKRAMEILKEALEKYN 394 (397)
T ss_pred CCCCCCeEEEE--EeCCHHHHHHHHHHHHHHHHHhh
Confidence 1469999 56789999999999999887644
No 155
>PRK08175 aminotransferase; Validated
Probab=99.83 E-value=6.5e-18 Score=174.98 Aligned_cols=343 Identities=15% Similarity=0.141 Sum_probs=205.8
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhcC-cCCCC-eEEEeCChhHHH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEAN 175 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~-~v~~~~sGseA~ 175 (514)
|+.++||.+| ++.+..+|.+.+++.+.+.... ..+....+..+....+++.+.+.++ ....+ ++++++++++++
T Consensus 28 ~~~~i~l~~g---~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l 104 (395)
T PRK08175 28 GEDIIDFSMG---NPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGL 104 (395)
T ss_pred CCCeEEcCCC---CCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence 5778999877 4555557778888888765321 1111111222333344444443322 12334 699999999999
Q ss_pred HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250 176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255 (514)
Q Consensus 176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (514)
..++.... ..+++|++.+++|.......... |... ..++... .+ .
T Consensus 105 ~~~~~~~~--------~~gd~Vlv~~P~y~~~~~~~~~~-g~~~------------~~v~~~~------~~----~---- 149 (395)
T PRK08175 105 AHLMLATL--------DHGDTVLVPNPSYPIHIYGAVIA-GAQV------------RSVPLVE------GV----D---- 149 (395)
T ss_pred HHHHHHhC--------CCCCEEEEcCCCCcchHHHHHHc-CCeE------------EEEeccc------CC----C----
Confidence 88776553 23468999999997654332221 1111 0111100 00 0
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-e-ecccCCCC
Q 010250 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-G-CDKYSIKP 333 (514)
Q Consensus 256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~-~~~~gv~p 333 (514)
..+++++++.+..+ +++++++...++.+|.+. +.+.+++|.++|++||+++|+||++..+-..|... . ....+ .+
T Consensus 150 ~~~~l~~~l~~~~~-~~~~v~i~~p~NPtG~~~-~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~-~~ 226 (395)
T PRK08175 150 FFNELERAIRESYP-KPKMMILGFPSNPTAQCV-ELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPG-AK 226 (395)
T ss_pred cHHHHHHHHhhccC-CceEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCC-cc
Confidence 14677777754332 455666654456667554 66788999999999999999999998763333211 1 11111 12
Q ss_pred ch----hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHH
Q 010250 334 DL----VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKI 407 (514)
Q Consensus 334 Di----v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~ 407 (514)
|. -+|||.++..++++|++++++++++.+... .....++.+...+.++.++++..++ +.+.+.++++
T Consensus 227 ~~~i~~~S~SK~~g~pGlRiG~~~~~~~l~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 299 (395)
T PRK08175 227 DVAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARI-------KSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRR 299 (395)
T ss_pred cCEEEEeeccccccCcchhheeeeCCHHHHHHHHHH-------HhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 32 368999865448999999999999888642 1112344455566666666642111 2345666677
Q ss_pred HHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEEEe
Q 010250 408 APKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMMS 479 (514)
Q Consensus 408 ~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iRi~ 479 (514)
.+.+.+.|+.+ ++.......|.++++++.+..... -...++..++ +.||.+.++ .+.+||+
T Consensus 300 ~~~~~~~L~~~---~~~~~~p~~g~~i~i~l~~~~~~~--------~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis 368 (395)
T PRK08175 300 RDVLVKGLHEA---GWMVEMPKASMYVWAKIPEPYAAM--------GSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFA 368 (395)
T ss_pred HHHHHHHHHHc---CCcccCCCEEEEEEEECCcccCCC--------CHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEE
Confidence 77787877765 221112235778888886432100 1345666665 689999875 2469999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHH
Q 010250 480 PPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 480 p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
+..+++.+.+++++|.+++.+
T Consensus 369 --~~~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 369 --LIENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred --eCCCHHHHHHHHHHHHHHHHh
Confidence 456889999999999988863
No 156
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.83 E-value=3.1e-18 Score=174.91 Aligned_cols=321 Identities=18% Similarity=0.185 Sum_probs=197.5
Q ss_pred CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccE
Q 010250 117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 196 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ 196 (514)
.++++.+|+.+.+.. +. +....+...++.+.++++++....+.+++++||++|+..++.... ..++.
T Consensus 10 ~~~~v~~a~~~~~~~----~~-~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~--------~~g~~ 76 (356)
T cd06451 10 VPPRVLKAMNRPMLG----HR-SPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLL--------EPGDK 76 (356)
T ss_pred CCHHHHHHhCCCccC----CC-CHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhC--------CCCCE
Confidence 467777777543321 11 111234466888899998854333468899999999999987553 23467
Q ss_pred EEEEecCCcccce-eeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEE
Q 010250 197 FIARQKSYHGSTL-IAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAF 275 (514)
Q Consensus 197 ii~~~~~yHG~t~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aav 275 (514)
|++.+.+|++... ......|... ..++....+ +.+.+++++.+.. .++++|
T Consensus 77 vl~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~-------------~~~~~~l~~~i~~---~~~~~v 128 (356)
T cd06451 77 VLVGVNGVFGDRWADMAERYGADV------------DVVEKPWGE-------------AVSPEEIAEALEQ---HDIKAV 128 (356)
T ss_pred EEEecCCchhHHHHHHHHHhCCCe------------EEeecCCCC-------------CCCHHHHHHHHhc---cCCCEE
Confidence 8887776665311 1111112111 111111000 1124677777752 245667
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhch--hhhhcCCcccceeEE
Q 010250 276 IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSAYMPIGAIL 353 (514)
Q Consensus 276 ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~--sK~l~gG~~pig~v~ 353 (514)
++..+++..|.+.+ +++|.++|+++|+++|+|++|. +|.. .+....+ .+|+++. +|.++++ .++|+++
T Consensus 129 ~i~~~~~~~G~~~~----~~~i~~~a~~~~~~li~D~~~~-~g~~--~~~~~~~--~~d~~~~s~~K~l~~p-~g~G~l~ 198 (356)
T cd06451 129 TLTHNETSTGVLNP----LEGIGALAKKHDALLIVDAVSS-LGGE--PFRMDEW--GVDVAYTGSQKALGAP-PGLGPIA 198 (356)
T ss_pred EEeccCCCcccccC----HHHHHHHHHhcCCEEEEeeehh-ccCc--ccccccc--CccEEEecCchhccCC-CCcceeE
Confidence 66666777898876 9999999999999999999986 6432 2222222 3576644 6999976 4689999
Q ss_pred eCHHHHHHhhhccCCCCcc---------cc---cCCCCCcHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHhhhhhc
Q 010250 354 VSPEVSEVIHSQSNTLGSF---------SH---GFTYSGHPVSCAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAF 418 (514)
Q Consensus 354 ~~~~i~~~l~~~~~~~~~~---------~~---~~t~~~~pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l 418 (514)
.++++++.+.......+.+ .. ....+.++....++.++++.+.+. .+.++.+++.+++++.|+++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 278 (356)
T cd06451 199 FSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL 278 (356)
T ss_pred ECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999888775300000000 00 112234455667777888776543 45677888888899988875
Q ss_pred cCCCceeEEEeee-eeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee-----CCEEEEeCCCCCCHHHHHH
Q 010250 419 SDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS-----GDNIMMSPPFIMSPEEVDE 491 (514)
Q Consensus 419 ~~~~~~~~v~g~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~-----g~~iRi~p~~~~t~e~id~ 491 (514)
...+.....+.+ .+..+.+.+.. ....+++.|.++ ||.+.++ ++.||++|...+|+|||++
T Consensus 279 -g~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~ 346 (356)
T cd06451 279 -GLKLLAKPELRSPTVTAVLVPEGV-----------DGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLG 346 (356)
T ss_pred -CCeeccCcccCCCceEEEECCCCC-----------CHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHH
Confidence 222222111112 22233332211 145688899998 9998753 3579999999999999999
Q ss_pred HHHHHHHHH
Q 010250 492 LISKYGKAL 500 (514)
Q Consensus 492 ~~~~l~~~l 500 (514)
++++|++++
T Consensus 347 ~~~~l~~~~ 355 (356)
T cd06451 347 VLSALEEAL 355 (356)
T ss_pred HHHHHHHHh
Confidence 999999876
No 157
>PRK08068 transaminase; Reviewed
Probab=99.83 E-value=5.7e-18 Score=175.05 Aligned_cols=336 Identities=13% Similarity=0.090 Sum_probs=197.8
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC--ccccccccCCchHHHHHHHHHHhcC-cCCCC-eEEEeCChhH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP--FYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSE 173 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~--~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~-~v~~~~sGse 173 (514)
.|..+|||..+ ++-...+|.+.+++.+.+.... .|... .+..+....+++.+.+.++ ....+ +++++++|++
T Consensus 30 ~~~~~i~l~~~---~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~-~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~ 105 (389)
T PRK08068 30 EGHDVINLGQG---NPDQPTPEHIVEALQEAAENPANHKYSPF-RGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKA 105 (389)
T ss_pred cCCCeEEecCC---CCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHH
Confidence 34568998777 3444567889999988876421 12111 1223333444444433222 13445 7999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHH
Q 010250 174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS 253 (514)
Q Consensus 174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (514)
++..++.... ..++.|++.+++|.+........+. .. ..++.... ..+
T Consensus 106 ~l~~~~~~~~--------~~gd~vlv~~P~y~~~~~~~~~~g~-~~------------~~i~~~~~----------~~~- 153 (389)
T PRK08068 106 GLVELPQCLM--------NPGDTILVPDPGYPDYLSGVALARA-QF------------ETMPLIAE----------NNF- 153 (389)
T ss_pred HHHHHHHHhC--------CCCCEEEEcCCCCcchHHHHHhcCC-EE------------EEeecccc----------cCC-
Confidence 9988876553 2346799999999776433322221 11 00111000 000
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc-cce-ecccCC
Q 010250 254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MFG-CDKYSI 331 (514)
Q Consensus 254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~-~~~-~~~~gv 331 (514)
..+++++++.+. .+....+++.| ++.+|.+ .+.+.+++|.++|++||+++|+||+|..|...+. ... ....+.
T Consensus 154 ~~d~~~l~~~~~---~~~~~v~l~~P-~NPTG~~-~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~ 228 (389)
T PRK08068 154 LPDYTKIPEEVA---EKAKLMYLNYP-NNPTGAV-ATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGA 228 (389)
T ss_pred CCCHHHHHHhcc---ccceEEEEECC-CCCCCCc-CCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCc
Confidence 001345555543 22334555557 5666654 4678899999999999999999999987754442 111 122222
Q ss_pred CCc---hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHH
Q 010250 332 KPD---LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNK 406 (514)
Q Consensus 332 ~pD---iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~ 406 (514)
.+. +-+|||.++..++++|++++++++++.+.... .....+..+..+.++.+++..-.+ +.+.+.+++
T Consensus 229 ~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~l~~~~-------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 301 (389)
T PRK08068 229 KDVGIELYTLSKTFNMAGWRVAFAVGNESVIEAINLLQ-------DHLFVSLFGAIQDAAIEALLSDQSCVAELVARYES 301 (389)
T ss_pred cCCEEEEecchhccCCccceeEeEecCHHHHHHHHHHH-------hhccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 222 23799998643399999999999998886421 111223334445555555531111 345677777
Q ss_pred HHHHHHhhhhhccCCCceeEEEeee-eeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee-------CCEEE
Q 010250 407 IAPKFQDGVKAFSDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-------GDNIM 477 (514)
Q Consensus 407 ~~~~l~~~L~~l~~~~~~~~v~g~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~-------g~~iR 477 (514)
+.+.+.+.|+++ +.. .....| .++++.+.+.. ....+.+.|++ +||.+.++ .+.||
T Consensus 302 ~r~~~~~~L~~~-g~~---~~~~~g~~~~~v~~~~~~-----------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iR 366 (389)
T PRK08068 302 RRNAFISACREI-GWE---VDAPKGSFFAWMPVPKGY-----------TSEQFADLLLEKAHVAVAPGNGFGEHGEGYVR 366 (389)
T ss_pred HHHHHHHHHHHC-CCc---ccCCCeeEEEEEECCCCC-----------CHHHHHHHHHHhCCEEEecchHhCccCCCeEE
Confidence 888888888765 221 123344 45677775321 13468888886 69999864 24799
Q ss_pred EeCCCCCCHHHHHHHHHHHHH
Q 010250 478 MSPPFIMSPEEVDELISKYGK 498 (514)
Q Consensus 478 i~p~~~~t~e~id~~~~~l~~ 498 (514)
|+ +..+++.+.+++++|.+
T Consensus 367 i~--~~~~~~~l~~al~~l~~ 385 (389)
T PRK08068 367 VG--LLTDEERLREAVERIGK 385 (389)
T ss_pred EE--EcCCHHHHHHHHHHHHH
Confidence 99 55677777777777764
No 158
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.83 E-value=2.4e-18 Score=175.82 Aligned_cols=322 Identities=15% Similarity=0.187 Sum_probs=196.9
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT 177 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~ 177 (514)
+|.+++||..|. +.++ .+|++.+++.+.+.....| +.....+|.+.++++++ ...+++++++|+++++..
T Consensus 28 ~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~Y------~~~~~~~lr~~ia~~~~-~~~~~I~it~G~~~al~~ 97 (357)
T PRK14809 28 DPDDLVKLSSNE--NPHG-PSPAAVEAIREAAERVHSY------PKASHADLTAALADRWD-VSPEQVWLANGGDGALDY 97 (357)
T ss_pred CccceeEecCCC--CCCC-CCHHHHHHHHHHHhhhhcC------CCCCHHHHHHHHHHHhC-CCcceEEECCCHHHHHHH
Confidence 466799998763 4455 5788999998877543222 12234578888888773 466899999999999999
Q ss_pred HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
+++... ..++.|++.+++|......... .+... ..++.+.. +.+. .+.
T Consensus 98 ~~~~~~--------~~gd~V~v~~P~y~~~~~~~~~-~g~~~------------~~~~l~~~----------~~~~-~~~ 145 (357)
T PRK14809 98 LARAML--------DPGDTVLVPDPGFAYYGMSARY-HHGEV------------REYPVSKA----------DDFE-QTA 145 (357)
T ss_pred HHHHhc--------CCCCEEEEeCCChHHHHHHHHH-cCCeE------------EEEecccC----------cCCC-cCH
Confidence 887653 3346899999998644321111 11110 00111000 0000 012
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-ecccCCCCchh
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYSIKPDLV 336 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~~gv~pDiv 336 (514)
+++++.. ++ +.++++...++.+|.+. +.+.+++|.++|++ ++++|+||+|..|...+.... .+..+-..-+-
T Consensus 146 ~~~~~~~----~~-~k~i~l~~p~NPTG~~~-s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~ 218 (357)
T PRK14809 146 DTVLDAY----DG-ERIVYLTSPHNPTGSEI-PLDEVEALAERTDE-ETLVVVDEAYGEFAERPSAVALVEERDDVAVLR 218 (357)
T ss_pred HHHHHhh----cC-CcEEEEeCCCCCCCcCC-CHHHHHHHHHhCcc-CcEEEEechhhhccCCchhHHHHhhCCCEEEEe
Confidence 3333322 12 33444445566677665 44567777777764 789999999998754332111 11111111133
Q ss_pred chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhhh
Q 010250 337 SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDGV 415 (514)
Q Consensus 337 ~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~L 415 (514)
+|||.++..++++|++++++++++.+... ..+++.+++++.++.++|+.-+ -++..+.++++.+.+.+.|
T Consensus 219 SfSK~~~~~GlRiG~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L 289 (357)
T PRK14809 219 TFSKAYGLAGLRLGYAVVPEEWADAYARV---------NTPFAASELACRAGLAALDDDEHVERTVETARWAREYIREEL 289 (357)
T ss_pred cchhHhcCcchhheeeecCHHHHHHHHHh---------CCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 78999874238999999999999888741 1356678888888887774210 0123444555555555555
Q ss_pred hhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-----CEEEEeCCCCCCHHHHH
Q 010250 416 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----DNIMMSPPFIMSPEEVD 490 (514)
Q Consensus 416 ~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-----~~iRi~p~~~~t~e~id 490 (514)
... . ....|.++++.+.+ ...+.+.|.++||.+.++. +.||++ + .++++++
T Consensus 290 ~~~---~----~~~~g~f~~~~~~~--------------~~~~~~~l~~~gv~v~~g~~f~~~~~iRls--~-~~~~~~~ 345 (357)
T PRK14809 290 DAP---T----WESAGNFVLAEVGD--------------ASAVAEAAQERGVIVRDCTSFGLPECIRIT--C-GTREETE 345 (357)
T ss_pred cCc---c----CCCCCCEEEEECCC--------------HHHHHHHHHHCCEEEEECccCCCCCeEEEe--c-CCHHHHH
Confidence 432 1 13457777776631 2357788899999999753 579999 3 4689999
Q ss_pred HHHHHHHHHHH
Q 010250 491 ELISKYGKALK 501 (514)
Q Consensus 491 ~~~~~l~~~l~ 501 (514)
+++++|+++++
T Consensus 346 ~~l~~L~~~l~ 356 (357)
T PRK14809 346 RAVEVLNEVLA 356 (357)
T ss_pred HHHHHHHHHhc
Confidence 99999988764
No 159
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.83 E-value=3.9e-18 Score=182.29 Aligned_cols=342 Identities=14% Similarity=0.181 Sum_probs=204.9
Q ss_pred CCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc----C-cCCCCeEEEeCC
Q 010250 97 VNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----T-ASKMAKVFFTNS 170 (514)
Q Consensus 97 ~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~----~-~~~~~~v~~~~s 170 (514)
..|+.+|||..|.. +++|. .++++++++.+++.....|.. .....+|.+.|++++ . ....++|+++++
T Consensus 143 ~~g~~~i~l~~G~p-~~~~~~~p~~~~~~~~~~~~~~~~Y~~-----~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G 216 (517)
T PRK13355 143 AAGTHILKLNIGNP-APFGFRTPDEVVYDMAQQLTDTEGYSD-----SKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNG 216 (517)
T ss_pred HcCCCeEEecCcCC-CcCCCCCCHHHHHHHHHHhhcCCCCCC-----CcChHHHHHHHHHHHHhcCCCCCChhHEEEeCc
Confidence 35788999988744 45675 478899999888765333321 122344555555544 1 235679999999
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCC
Q 010250 171 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGET 248 (514)
Q Consensus 171 GseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 248 (514)
++|++..+++... ..++.|++.+++|..+.......++.... +++. ..|.
T Consensus 217 ~~eal~~~~~~l~--------~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~-------------~~~~~~~~~~------- 268 (517)
T PRK13355 217 VSELINLSMSALL--------DDGDEVLIPSPDYPLWTACVNLAGGTAVH-------------YRCDEQSEWY------- 268 (517)
T ss_pred HHHHHHHHHHHhC--------CCCCEEEEcCCCCcCHHHHHHHCCCEEEE-------------eecCcccCCC-------
Confidence 9999999987653 33578999999998876444333322111 1110 0111
Q ss_pred hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecc
Q 010250 249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDK 328 (514)
Q Consensus 249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~ 328 (514)
.+++++++.+. ++..+.+++.| ++.+|.+. +++.+++|.++|++||+++|+||+|..|-..|..+. ..
T Consensus 269 ------~d~~~l~~~~~---~~~k~i~i~nP-~NPTG~v~-~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~-s~ 336 (517)
T PRK13355 269 ------PDIDDIRSKIT---SRTKAIVIINP-NNPTGALY-PREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHT-SI 336 (517)
T ss_pred ------CCHHHHHHhcC---cCceEEEEECC-CCCCCcCc-CHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcc-cH
Confidence 11466666553 34456667777 55556554 578999999999999999999999987744442111 11
Q ss_pred cCCCCch--h---chhhhhcCCcccceeEEe--CHHH----HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh
Q 010250 329 YSIKPDL--V---SFAKALSSAYMPIGAILV--SPEV----SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE 397 (514)
Q Consensus 329 ~gv~pDi--v---~~sK~l~gG~~pig~v~~--~~~i----~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~ 397 (514)
....+|. + +|||.++-.++++|++++ ++++ ++.+.. .....++.+.+++.++.++|+....
T Consensus 337 ~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~q~a~~~aL~~~~~ 408 (517)
T PRK13355 337 ASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNM--------LANMRLCSNVPAQSIVQTALGGHQS 408 (517)
T ss_pred HHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHHH--------HhcCcCCcChHHHHHHHHHhcCCcc
Confidence 1123443 2 479976543399999985 3543 333321 0112244566777777777742100
Q ss_pred -ccHH---HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeE-EEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee
Q 010250 398 -RNIV---EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLIL-GTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS 472 (514)
Q Consensus 398 -~~~~---~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~ 472 (514)
++.. .+..+..+++.+.|+++ +.+......|.++ ++.+...... ... ....+...|.++||++.++
T Consensus 409 ~~~~~~~~~~~~~~r~~l~~~L~~~---~g~~~~~p~g~fy~~~~l~~~~~~---~~~---~~~~~~~ll~~~gV~v~pg 479 (517)
T PRK13355 409 VKDYLVPGGRVYEQRELVYNALNAI---PGISAVKPKAAFYIFPKIDVKKFN---IHD---DEQFALDLLHDKKVLIVQG 479 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC---CCcccCCCCeeeEEEeecCcccCC---CCC---HHHHHHHHHHhCCEEEeCc
Confidence 1111 23344456666766654 2233334455554 4455431100 000 1233445677899999864
Q ss_pred -------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 473 -------GDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 473 -------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
.+.+|++ +..++++|++++++|.++++..
T Consensus 480 ~~F~~~~~~~~Ris--~~~~~~~l~~a~~rl~~~~~~~ 515 (517)
T PRK13355 480 TGFNWDKPDHFRVV--YLPRLEDLEDAMDRLADFFSYY 515 (517)
T ss_pred chhCCCCcCEEEEE--eCCCHHHHHHHHHHHHHHHHHh
Confidence 2469999 6789999999999999998654
No 160
>PRK12414 putative aminotransferase; Provisional
Probab=99.83 E-value=5.6e-18 Score=174.74 Aligned_cols=337 Identities=13% Similarity=0.082 Sum_probs=203.2
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC-C-CCeEEEeCChhHHHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS-K-MAKVFFTNSGSEANDT 177 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~-~-~~~v~~~~sGseA~~~ 177 (514)
+.+|||..|.. .++ .+|.+.+++.+.+......+....+..+....+++++.+.++.. . .+++++++||++|+..
T Consensus 29 ~~~i~l~~g~p--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~ 105 (384)
T PRK12414 29 HDALNLSQGAP--NFA-PDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYA 105 (384)
T ss_pred CCeEEcCCCCC--CCC-CCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHH
Confidence 45788887753 344 47889999888775421111111223455566777776665421 2 2579999999999998
Q ss_pred HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
+++... .++++|++.+++|.+........+.. . ..++... +.+ ..++
T Consensus 106 ~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~g~~-~------------~~v~~~~-----------~~~-~~d~ 152 (384)
T PRK12414 106 AISALV--------HPGDEVIYFEPSFDSYAPIVRLQGAT-P------------VAIKLSP-----------EDF-RVNW 152 (384)
T ss_pred HHHHhc--------CCCCEEEEeCCCccchHHHHHHcCCE-E------------EEEecCc-----------ccc-ccCH
Confidence 887653 34578999999997653322221111 0 0011100 000 1124
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-ee-cccCCCCch
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GC-DKYSIKPDL 335 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~-~~~gv~pDi 335 (514)
++|++.+. +++.+|++...++.+|.+. +++.+++|.++|++||+++|+||+|..|...|... .. .+.+....+
T Consensus 153 ~~l~~~l~----~~~~~v~i~~p~NPTG~~~-s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~ 227 (384)
T PRK12414 153 DEVAAAIT----PRTRMIIVNTPHNPSATVF-SAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERS 227 (384)
T ss_pred HHHHhhcC----cccEEEEEcCCCCCCCcCC-CHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcE
Confidence 56666553 2345555555566677654 56789999999999999999999998663333211 11 111222222
Q ss_pred h---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH-hhccHHHHHHHHHHHH
Q 010250 336 V---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY-KERNIVEQVNKIAPKF 411 (514)
Q Consensus 336 v---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~-~~~~~~~~~~~~~~~l 411 (514)
+ +|||.++..++++|++++++++++.+... ....+++.+.+++.++.+.|+.- ...++.+.++++.+.+
T Consensus 228 i~~~SfSK~~~~pGlRiG~~v~~~~l~~~l~~~-------~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l 300 (384)
T PRK12414 228 VIVSSFGKSYHVTGWRVGYCLAPAELMDEIRKV-------HQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLL 300 (384)
T ss_pred EEEecccccccCccceEEEEecCHHHHHHHHHH-------HhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Confidence 2 68998863339999999999998887641 12235666777777777666421 1113456677778888
Q ss_pred HhhhhhccCCCceeEEEeee-eeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---------CCEEEEeCC
Q 010250 412 QDGVKAFSDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---------GDNIMMSPP 481 (514)
Q Consensus 412 ~~~L~~l~~~~~~~~v~g~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------g~~iRi~p~ 481 (514)
.+.|++. + .......| .++++.+...... ...+.+...|.++||.+.++ .+.||++
T Consensus 301 ~~~L~~~---g-~~~~~~~gg~~~~~~~~~~~~~--------~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis-- 366 (384)
T PRK12414 301 ARELAGS---R-FELLPSEGSFFMLARFRHFSDE--------SDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLS-- 366 (384)
T ss_pred HHHHHhC---C-CeecCCCcceEEEEcccccCCC--------CHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEE--
Confidence 8887764 2 11222334 4555566431100 01223335667889999874 1469999
Q ss_pred CCCCHHHHHHHHHHHHH
Q 010250 482 FIMSPEEVDELISKYGK 498 (514)
Q Consensus 482 ~~~t~e~id~~~~~l~~ 498 (514)
+..+++++++++++|.+
T Consensus 367 ~~~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 367 FSKDDATLVEGARRLCS 383 (384)
T ss_pred ecCCHHHHHHHHHHHhh
Confidence 56689999999998864
No 161
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.82 E-value=7.2e-18 Score=171.95 Aligned_cols=321 Identities=17% Similarity=0.188 Sum_probs=203.1
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV 179 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al 179 (514)
..++||..|. +.+|. +|.+.+++.+.+..+..| +.....+|.+.+++++. .+.+++++++++++++..++
T Consensus 19 ~~~~~l~~~~--~~~~~-p~~~~~a~~~~~~~~~~Y------~~~~~~~lr~~ia~~~~-~~~~~i~it~Ga~~~l~~~~ 88 (354)
T PRK06358 19 NMILDFSANI--NPLGV-PESLKQAITENLDKLVEY------PDPDYLELRKRIASFEQ-LDLENVILGNGATELIFNIV 88 (354)
T ss_pred cceEEecCCC--CCCCC-CHHHHHHHHHHHHhhhcC------CCccHHHHHHHHHHHhC-CChhhEEECCCHHHHHHHHH
Confidence 4579997654 45664 789999998877543322 22224678888888873 46789999999999999888
Q ss_pred HHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250 180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259 (514)
Q Consensus 180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (514)
+.. .+ +.|++.+++|+......... |.... .++.... +.+. .+ ++
T Consensus 89 ~~~---------~~-~~v~i~~P~y~~~~~~~~~~-g~~~~------------~~~~~~~----------~~~~-~d-~~ 133 (354)
T PRK06358 89 KVT---------KP-KKVLILAPTFAEYERALKAF-DAEIE------------YAELTEE----------TNFA-AN-EI 133 (354)
T ss_pred HHh---------CC-CcEEEecCChHHHHHHHHHc-CCeeE------------EEeCccc----------cCCC-cc-HH
Confidence 754 12 47999999998765333221 11110 0111000 0000 00 12
Q ss_pred HHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-ecccCCCCchh--
Q 010250 260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYSIKPDLV-- 336 (514)
Q Consensus 260 le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~~gv~pDiv-- 336 (514)
+.+.+. .+....+++.| ++.+|.+ .+.+.+++|.++|++||+++|+||+|..|-..+.... .......+.++
T Consensus 134 ~~~~~~---~~~~~v~~~~P-~NPtG~~-~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~ 208 (354)
T PRK06358 134 VLEEIK---EEIDLVFLCNP-NNPTGQL-ISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIII 208 (354)
T ss_pred HHHhhc---cCCCEEEEeCC-CCCCCCc-cCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEE
Confidence 222222 22334457777 5555654 4678899999999999999999999987744332111 11112123333
Q ss_pred -chhhhhc-CCcccceeEEeC-HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHH
Q 010250 337 -SFAKALS-SAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQ 412 (514)
Q Consensus 337 -~~sK~l~-gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~~~~l~ 412 (514)
+|||.++ .| +++|+++++ +.+++.+... . ..++.+.++..++.++|+.-+. ++..+.++++.+.+.
T Consensus 209 ~S~SK~~gl~G-~RiG~lv~~~~~~~~~~~~~-------~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~ 278 (354)
T PRK06358 209 RAFTKFFAIPG-LRLGYGLTSNKNLAEKLLQM-------R--EPWSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLY 278 (354)
T ss_pred EechhhccCcc-hhheeeecCCHHHHHHHHHh-------C--CCCcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 6899887 45 999999984 6787777631 1 2456677777777777742111 234556677777777
Q ss_pred hhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----C---CEEEEeCCCCCC
Q 010250 413 DGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----G---DNIMMSPPFIMS 485 (514)
Q Consensus 413 ~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----g---~~iRi~p~~~~t 485 (514)
+.|+++ +.+....+.|.++.+.+.+ ...+.+.|.++||.+.++ + +.||++ ..+
T Consensus 279 ~~L~~~---~~~~~~~~~g~f~~~~~~~--------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls---~~~ 338 (354)
T PRK06358 279 NGLSEF---KGIKVYKPSVNFIFFKLEK--------------PIDLRKELLKKGILIRSCSNYRGLDENYYRVA---VKS 338 (354)
T ss_pred HHHhcC---CCcEEcCCcceEEEEEcCc--------------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEE---eCC
Confidence 777664 2222234456677776642 135778899999999974 1 469999 678
Q ss_pred HHHHHHHHHHHHHHH
Q 010250 486 PEEVDELISKYGKAL 500 (514)
Q Consensus 486 ~e~id~~~~~l~~~l 500 (514)
+++.++++++|++.+
T Consensus 339 ~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 339 REDNKKLLKALEVIL 353 (354)
T ss_pred HHHHHHHHHHHHHHh
Confidence 899999999998764
No 162
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.82 E-value=9e-18 Score=175.35 Aligned_cols=343 Identities=14% Similarity=0.121 Sum_probs=201.9
Q ss_pred CCEEEEccCCcccccCC-C-CCHHHHHHHHHHHhcCCc-cccccccCCchHHHHHHHHHHhcC-----cCCCCeEEEeCC
Q 010250 99 GKKYLDSLAGLWCTALG-G-SEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFT-----ASKMAKVFFTNS 170 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lG-h-~~p~v~~A~~~~l~~~~~-~~~~~~~~~~~~~ela~~L~~~~~-----~~~~~~v~~~~s 170 (514)
|+.+|++..|... .++ . .+|++.+++.++++.... .++ +.....++.+.+++++. ....++|++++|
T Consensus 51 ~~~~i~l~~G~P~-~~~~~~~~~~~~~a~~~al~~~~~~~Y~----~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G 125 (430)
T PLN00145 51 PRPVLPLGHGDPS-AFPCFRTAPEAEDAVAAALRSGKYNSYS----TCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAG 125 (430)
T ss_pred CCCeeeCCCCCCC-CCCCCCCCHHHHHHHHHHHHcCcCCCCC----CCccCHHHHHHHHHHHhhccCCCCChhhEEEeCC
Confidence 7889998877432 222 2 467899999988865321 111 11223455555555542 124578999999
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCC
Q 010250 171 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGET 248 (514)
Q Consensus 171 GseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 248 (514)
+++|+..+++... .+++.|++.+++|..+.......+.... .++.+ ..|.
T Consensus 126 ~~~al~l~~~~l~--------~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~-------------~~~~~~~~~~~------- 177 (430)
T PLN00145 126 CAQAIEIIMSVLA--------QPGANILLPRPGYPLYEARAVFSGLEVR-------------HFDLLPERGWE------- 177 (430)
T ss_pred HHHHHHHHHHHhc--------CCCCEEEEcCCCCccHHHHHHHcCCEEE-------------EeeCCcccCCc-------
Confidence 9999999988763 3356899999999875433222111111 11110 0111
Q ss_pred hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eec
Q 010250 249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCD 327 (514)
Q Consensus 249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~ 327 (514)
.+++++++++. ++..+++++.|. +.+|.+ .+.+.+++|.++|++||+++|+||+|..|...+..+ ...
T Consensus 178 ------~d~~~l~~~~~---~~~~~i~i~~P~-NPtG~v-~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~ 246 (430)
T PLN00145 178 ------VDLEGVEALAD---ENTVAMVIINPN-NPCGSV-YSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMG 246 (430)
T ss_pred ------CCHHHHHHHhC---cCceEEEEeCCC-CCCCCC-CCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchh
Confidence 12467777664 345677777775 556654 466889999999999999999999998774333221 111
Q ss_pred ccCCCCchh---chhhhhcCCcccceeEEe--CHHHHH------HhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh
Q 010250 328 KYSIKPDLV---SFAKALSSAYMPIGAILV--SPEVSE------VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK 396 (514)
Q Consensus 328 ~~gv~pDiv---~~sK~l~gG~~pig~v~~--~~~i~~------~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~ 396 (514)
.++-...++ +|||.++..++++|++++ ++.+++ .+.. +. ..+.+.+.+.+.++..+|+.-.
T Consensus 247 ~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~Q~a~~~~l~~~~ 318 (430)
T PLN00145 247 VFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRN-------YL-NISTDPATFVQGAIPQIIANTK 318 (430)
T ss_pred hhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHH-------Hh-cccCCCCHHHHHHHHHHHhcCH
Confidence 111112233 589985544499999987 333332 2321 11 1122345667777766665311
Q ss_pred h---ccHHHHHHHHHHHHHhhhhhccCCCceeE-EEee-eeeEEEEEccCCCCCCCCCCccchHHHHHH-HHHHCCcEEE
Q 010250 397 E---RNIVEQVNKIAPKFQDGVKAFSDSPIIGE-IRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGA-QCEKHGMLVR 470 (514)
Q Consensus 397 ~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~-v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~Gv~~~ 470 (514)
+ ++..+.++++.+.+.+.|+++ +.+.. .... |+++.+.++...... .. ....++. .+.++||++.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~L~~~---~g~~~~~~P~ga~y~~v~l~~~~~~~--~~----~~~~~~~~ll~~~gV~v~ 389 (430)
T PLN00145 319 EEFFTKTLGLLKETADICYEKIKEI---KCITCPHKPEGSMFVMVKLDLSCLSG--IK----DDMDFCCKLAKEESVVVL 389 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC---CCCCCCcCCCeeeEEEeccChhhcCC--CC----CHHHHHHHHHHhCCEEEe
Confidence 1 234555666666677766654 22221 2233 455566664211000 00 0233554 4557799998
Q ss_pred ee-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 471 VS-----GDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 471 ~~-----g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
|+ .+++||+ +..+++++++++++|.+++.+..
T Consensus 390 pG~~fg~~~~lRis--~~~~~~~l~~al~rl~~~~~~~~ 426 (430)
T PLN00145 390 PGSALGMKNWLRIT--FAIDPPSLEDGLERLKSFCLRHA 426 (430)
T ss_pred CccccCCCCeEEEE--eCCCHHHHHHHHHHHHHHHHHhc
Confidence 75 2679999 56789999999999999887654
No 163
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.82 E-value=5e-18 Score=173.37 Aligned_cols=326 Identities=13% Similarity=0.108 Sum_probs=200.7
Q ss_pred CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250 97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 176 (514)
Q Consensus 97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~ 176 (514)
.+++.++||..|- +.+| .+|.+++|+.+.+.....| +.....++.+.+++++. .+.+++++++++++++.
T Consensus 17 ~~~~~~i~l~~~~--~~~~-~p~~~~~a~~~~~~~~~~y------~~~~~~~lr~~ia~~~~-~~~~~i~it~Ga~~~l~ 86 (356)
T PRK08056 17 ISPDQLLDFSANI--NPLG-MPVSLKRAIIDNLDCAERY------PDVEYRHLHQALARHHQ-VPASWILAGNGETESIF 86 (356)
T ss_pred CChhhEEEecccc--CCCC-CCHHHHHHHHHHHHhcccC------cCccHHHHHHHHHHHhC-cChhhEEECCCHHHHHH
Confidence 4577899997653 5567 6788999998877653322 12235678888888874 45689999999999998
Q ss_pred HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHH
Q 010250 177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 256 (514)
Q Consensus 177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (514)
.+++... ++ ++++.+++|......... .|.... .++.... +.+. .+
T Consensus 87 ~~~~~l~--------~g--~viv~~P~y~~~~~~~~~-~g~~~~------------~v~~~~~----------~~~~-~~ 132 (356)
T PRK08056 87 AVVSGLK--------PR--RAMIVTPGFAEYRRALQQ-VGCEIR------------RYSLREA----------DGWQ-LT 132 (356)
T ss_pred HHHHHhC--------CC--CEEEeCCCcHHHHHHHHH-cCCeEE------------EEecccc----------cCCC-cc
Confidence 8887541 32 477788888665322221 121110 0111000 0000 00
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh
Q 010250 257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV 336 (514)
Q Consensus 257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv 336 (514)
+++.+.+. +++.+|++...++.+|. ..+.+.+++|.++|++||+++|+||+|.+|...+.............++
T Consensus 133 -~~~~~~~~----~~~k~v~l~~p~NPTG~-~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~ 206 (356)
T PRK08056 133 -DAILEALT----PDLDCLFLCTPNNPTGL-LPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWV 206 (356)
T ss_pred -HHHHHhcc----CCCCEEEEeCCcCCCCC-CCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEE
Confidence 12222222 23444445444555666 4567889999999999999999999998874333211000011112232
Q ss_pred --chhhhhcCCcccceeEEe-CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHH
Q 010250 337 --SFAKALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQ 412 (514)
Q Consensus 337 --~~sK~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~ 412 (514)
+|||.++-.++++|++++ ++++++.+... ...++.+.+++.++.++++.-. .+...+.++++.+++.
T Consensus 207 ~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~---------~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~ 277 (356)
T PRK08056 207 LRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQ---------QMPWSINAFAALAGEVILQDRAYQQATWQWLAEEGARFY 277 (356)
T ss_pred EEechhhccCcchhheeeecCCHHHHHHHHHh---------CCCCchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 689988843389999998 46777777531 1245566777777777664111 1234566777778888
Q ss_pred hhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-------CEEEEeCCCCCC
Q 010250 413 DGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-------DNIMMSPPFIMS 485 (514)
Q Consensus 413 ~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-------~~iRi~p~~~~t 485 (514)
+.|+++.. +......|.++++.+... ...+++.|+++||.++++. +.|||+ ..+
T Consensus 278 ~~L~~~~~---~~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis---~~~ 338 (356)
T PRK08056 278 QALCALPL---LTVWPGRANYLFLRCERP-------------DIDLQRALLTQRILIRSCANYPGLDSRYYRVA---IRS 338 (356)
T ss_pred HHHhcCCC---cEEcCCCCcEEEEEcCCC-------------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEE---EcC
Confidence 88876522 222233566777765421 2357788999999998642 479999 457
Q ss_pred HHHHHHHHHHHHHHH
Q 010250 486 PEEVDELISKYGKAL 500 (514)
Q Consensus 486 ~e~id~~~~~l~~~l 500 (514)
+++.+.+++.|++++
T Consensus 339 ~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 339 AAENERLLAALRNVL 353 (356)
T ss_pred HHHHHHHHHHHHHHH
Confidence 899999999888764
No 164
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.82 E-value=7.2e-18 Score=174.99 Aligned_cols=350 Identities=12% Similarity=0.077 Sum_probs=204.8
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhcCc--CCCC-eEEEeCChhH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFTA--SKMA-KVFFTNSGSE 173 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~~~--~~~~-~v~~~~sGse 173 (514)
.|+.++|+.+|. ..++ .+|.+.+++.+.+.... ..+.. .+.......+++.+.+..+- .+.+ +|++++|+.+
T Consensus 42 ~~~~~i~L~~g~--p~~~-~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~ 117 (410)
T PRK06290 42 PDMELIDMGVGE--PDEM-ADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKP 117 (410)
T ss_pred CCCCeEEcCCCC--CCCC-CCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHH
Confidence 467789998774 3455 46778888887664321 11111 22333344444444433221 2344 6999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHH
Q 010250 174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS 253 (514)
Q Consensus 174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (514)
|+..++.+.. ..++.|++.+++|.+....+...+. .. ..++.... ..+
T Consensus 118 al~~~~~~~~--------~~gd~Vlv~~P~y~~~~~~~~~~g~-~v------------~~v~~~~~----------~~~- 165 (410)
T PRK06290 118 ALAMLPSCFI--------NPGDVTLMTVPGYPVTGTHTKYYGG-EV------------YNLPLLEE----------NNF- 165 (410)
T ss_pred HHHHHHHHhC--------CCCCEEEEeCCCCccHHHHHHHcCC-EE------------EEEecCCC----------cCC-
Confidence 9998887653 3456899999999886433222211 11 01111000 000
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEEc-cccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccccee-cccCC
Q 010250 254 TRLANNLEDLILKEGPETIAAFIAE-PVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC-DKYSI 331 (514)
Q Consensus 254 ~~~~~~le~li~~~~~~~~aavivE-pv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~-~~~gv 331 (514)
..+++++++.+. +++.+|++. | ++.+|.+. +.+.+++|.++|++||++||+||+|..+-..+....+ ...+.
T Consensus 166 ~~d~~~l~~~~~----~~~k~i~l~nP-~NPTG~v~-s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~ 239 (410)
T PRK06290 166 LPDLDSIPKDIK----EKAKLLYLNYP-NNPTGAVA-TKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGA 239 (410)
T ss_pred cCCHHHHHHhhc----ccceEEEEECC-CCCCCcCC-CHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCc
Confidence 001355555543 234455555 6 56666554 6788999999999999999999999876332321111 11111
Q ss_pred C-Cch--hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHH
Q 010250 332 K-PDL--VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKI 407 (514)
Q Consensus 332 ~-pDi--v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~ 407 (514)
. .++ -+|||.++..++++|++++++++++.+... ......+.+.+++.++.++|+.-+ -++..+.++++
T Consensus 240 ~~~~I~i~SfSK~~g~~GlRiG~ii~~~~l~~~l~~~-------~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~ 312 (410)
T PRK06290 240 KEVGVEIHSLSKAYNMTGWRLAFVVGNELIVKAFATV-------KDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSRR 312 (410)
T ss_pred cccEEEEeechhhcCCchhheEeEEeCHHHHHHHHHH-------HhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHH
Confidence 1 123 368999864449999999999999888642 111233334466666666664311 12356667777
Q ss_pred HHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE-ee---CCEEEEeCCC
Q 010250 408 APKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR-VS---GDNIMMSPPF 482 (514)
Q Consensus 408 ~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~-~~---g~~iRi~p~~ 482 (514)
.+.+.+.|+++ ++ ...+.. |.++++.+++........ .....+++.|+++|+++. |+ ++++||+...
T Consensus 313 ~~~l~~~L~~~---g~-~~~~p~g~f~l~v~lp~~~~~~~~~----~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~ 384 (410)
T PRK06290 313 LDKLVKILNEV---GF-KAEMPGGTFYLYVKAPKGTKSGIKF----ENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTF 384 (410)
T ss_pred HHHHHHHHHhC---CC-eecCCCeeeEEEEECCCccccCCCC----CCHHHHHHHHHHhCCEEEECCccccCeEEEEEEc
Confidence 77888888765 22 112233 445566765421100000 014568889998875554 43 3579999321
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHH
Q 010250 483 -IMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 483 -~~t~e~id~~~~~l~~~l~~~~ 504 (514)
..++|+.++++++|++.|..++
T Consensus 385 ~~~~~~~~~~~~~~l~~~~~~~~ 407 (410)
T PRK06290 385 EAKDEEEEDRILEEIKRRLSDVE 407 (410)
T ss_pred ccccccchhHHHHHHHHHHhhcc
Confidence 2488999999999999987664
No 165
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.82 E-value=5e-18 Score=174.50 Aligned_cols=333 Identities=15% Similarity=0.150 Sum_probs=201.8
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-------CCCCeEEEeCChh
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-------SKMAKVFFTNSGS 172 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-------~~~~~v~~~~sGs 172 (514)
+.++|+.+|. .+++ .+|.+.+++.+.+......+. + +.....+|.+.|++++.. ...++|++++|++
T Consensus 28 ~~~~~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~-Y--~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~ 101 (374)
T PRK02610 28 IQLDRLDTNE--FPYD-LPPDLKQKLAWLYQQGIESNR-Y--PDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSD 101 (374)
T ss_pred cceeEecCCC--CCCC-CCHHHHHHHHHHHhhcccccC-C--CCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChH
Confidence 4688888774 3344 578999999987765211000 1 122345666677766631 3557899999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhH
Q 010250 173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEE 251 (514)
Q Consensus 173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 251 (514)
+++..++.... .++.++|++.+++|.+........+. ... .++.. +.|.
T Consensus 102 ~al~~~~~~~~-------~~g~~~Vlv~~P~y~~~~~~~~~~g~-~~~------------~~~~~~~~~~---------- 151 (374)
T PRK02610 102 ELIRSLLIATC-------LGGEGSILVAEPTFSMYGILAQTLGI-PVV------------RVGRDPETFE---------- 151 (374)
T ss_pred HHHHHHHHHHc-------CCCCCeEEEcCCChHHHHHHHHHcCC-EEE------------EecCCcccCC----------
Confidence 99987765432 13334799999999876533322221 110 01100 0011
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCC
Q 010250 252 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI 331 (514)
Q Consensus 252 ~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv 331 (514)
.++++|++.+......++.+|++.+.++.+|.+. +.+.+++|.++| +|+++|.||++..|.... . .....-
T Consensus 152 ---~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~-s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~-~--~~~~~~ 222 (374)
T PRK02610 152 ---IDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPL-TAAELEWLRSLP--EDILVVIDEAYFEFSQTT-L--VGELAQ 222 (374)
T ss_pred ---CCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCC-CHHHHHHHHhcc--CCcEEEEeccccccCccc-h--HHHHhc
Confidence 1146777776532123455565545577778766 456688888877 499999999998773211 1 111111
Q ss_pred CCchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHH
Q 010250 332 KPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKI 407 (514)
Q Consensus 332 ~pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~ 407 (514)
.+.++ +|||.++..++++|++++++++++.+... . ..++.+.++..++.++++..+. .+...+..+.
T Consensus 223 ~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~~~-------~--~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 293 (374)
T PRK02610 223 HPNWVILRTFSKAFRLAAHRVGYAIGHPELIAVLEKV-------R--LPYNLPSFSQLAAQLALEHRQELLAAIPEILQE 293 (374)
T ss_pred CCCEEEEEecchhccCcccceeeeecCHHHHHHHHHh-------c--CCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 23333 68998864449999999999999888642 1 2345567777777777753211 0111222233
Q ss_pred HHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHH
Q 010250 408 APKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPE 487 (514)
Q Consensus 408 ~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e 487 (514)
.+.+.+.|+.+ +.+......|.++++.+.... ....+.+.|.++||.+.+..+.+||+ +. +++
T Consensus 294 r~~l~~~L~~~---~~~~~~p~~g~f~~~~l~~~~-----------~~~~~~~~l~~~gi~v~~~~~~lRls--~~-~~~ 356 (374)
T PRK02610 294 RDRLYQALQEL---PQLRVWPSAANFLYLRLSQDA-----------ALAALHQALKAQGTLVRHTGGGLRIT--IG-TPE 356 (374)
T ss_pred HHHHHHHHHhC---CCcEeCCCcceEEEEeCCCCC-----------CHHHHHHHHHHCCEEEEeCCCeEEEe--CC-CHH
Confidence 44555555544 222222445677777775321 13457788999999998877789999 33 567
Q ss_pred HHHHHHHHHHHHHHHH
Q 010250 488 EVDELISKYGKALKAT 503 (514)
Q Consensus 488 ~id~~~~~l~~~l~~~ 503 (514)
++++++++|++++.++
T Consensus 357 ~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 357 ENQRTLERLQAALTQL 372 (374)
T ss_pred HHHHHHHHHHHHHhhc
Confidence 8899999999887654
No 166
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.82 E-value=1.2e-17 Score=162.35 Aligned_cols=327 Identities=11% Similarity=0.090 Sum_probs=213.6
Q ss_pred CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCcc
Q 010250 117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 195 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~ 195 (514)
.+|.|++|+.+.++.+.++++. .+.+....+.+...+.... ...+.++|+++..-++..+|+... ..++
T Consensus 39 ~pp~i~~Al~~rvdhGvfGY~~--~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T--------~~gd 108 (388)
T COG1168 39 TPPEIIEALRERVDHGVFGYPY--GSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALT--------KPGD 108 (388)
T ss_pred CCHHHHHHHHHHHhcCCCCCCC--CCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhC--------cCCC
Confidence 5899999999999987665441 1233444455555554432 356789999999999999998763 3457
Q ss_pred EEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEE
Q 010250 196 KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAF 275 (514)
Q Consensus 196 ~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aav 275 (514)
.|++..+.|+--. ..+...+.... .+|-.+. +.--..|+++||+.+.+. .....+
T Consensus 109 ~Vvi~tPvY~PF~-~~i~~n~R~~i--------------~~pL~~~--------~~~y~iD~~~LE~~~~~~--~vkl~i 163 (388)
T COG1168 109 GVVIQTPVYPPFY-NAIKLNGRKVI--------------ENPLVED--------DGRYEIDFDALEKAFVDE--RVKLFI 163 (388)
T ss_pred eeEecCCCchHHH-HHHhhcCcEEE--------------ecccccc--------CCcEEecHHHHHHHHhcC--CccEEE
Confidence 8999999987531 11111111111 1110000 001123468899888642 224566
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc-ccceecccCCCCc-----hhc--hhhhhcCCcc
Q 010250 276 IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG-TMFGCDKYSIKPD-----LVS--FAKALSSAYM 347 (514)
Q Consensus 276 ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G-~~~~~~~~gv~pD-----iv~--~sK~l~gG~~ 347 (514)
+++|-|+.| .+++++.|.+|.+||.+||+++|+||+|+.+-..| +...+. .+.|+ +++ -||++.-+++
T Consensus 164 LCnPHNP~G--rvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a--~ls~~~a~~~it~~saSKtFNlaGL 239 (388)
T COG1168 164 LCNPHNPTG--RVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFA--SLSERFADNSITLTSASKTFNLAGL 239 (388)
T ss_pred EeCCCCCCC--ccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchh--hcChhhhcceEEEeeccccccchhh
Confidence 677766655 66789999999999999999999999999996666 333222 22222 222 3687654337
Q ss_pred cceeEEe-CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHhhhhhccCCCce
Q 010250 348 PIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDGVKAFSDSPII 424 (514)
Q Consensus 348 pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~ 424 (514)
.+++++. ++++...+... .......+.|.++..|..+|++.-++ +++.+.++.+.+++.+.|++. .|.+
T Consensus 240 ~~a~~Ii~n~~lr~~~~~~------l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~--~P~v 311 (388)
T COG1168 240 KCAYIIISNRELRAKFLKR------LKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKH--LPGV 311 (388)
T ss_pred hheeEEecCHHHHHHHHHH------HHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhh--CCCc
Confidence 8887665 56665555431 12224556789999999999986543 567888999999999988763 4666
Q ss_pred eEEEeeeee-EEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEE------eeC-CEEEEeCCCCCCHHHHHHHHHH
Q 010250 425 GEIRGTGLI-LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVR------VSG-DNIMMSPPFIMSPEEVDELISK 495 (514)
Q Consensus 425 ~~v~g~g~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~------~~g-~~iRi~p~~~~t~e~id~~~~~ 495 (514)
.-....|.+ .+++|..-... .+.+.+.|+++ +|.+. +.| +.+|+. +.++++-+++++++
T Consensus 312 ~v~~p~gTYL~WLD~r~l~l~----------d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN--~acpr~~L~eal~r 379 (388)
T COG1168 312 KVTEPQGTYLAWLDCRELGLD----------DSELAEFLLEEAKVALSPGSTFGEEGSGFVRLN--FACPRAILEEALER 379 (388)
T ss_pred EEecCCCceeeeeeccccCCC----------hHHHHHHHHHhhcEeccCCCccCcCCCceEEEe--cCCCHHHHHHHHHH
Confidence 677778885 56788654322 12355555543 44444 334 459999 89999999999999
Q ss_pred HHHHHHH
Q 010250 496 YGKALKA 502 (514)
Q Consensus 496 l~~~l~~ 502 (514)
|..+++.
T Consensus 380 i~~al~~ 386 (388)
T COG1168 380 LKRALKK 386 (388)
T ss_pred HHHHHhc
Confidence 9988865
No 167
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.82 E-value=9.1e-18 Score=174.42 Aligned_cols=341 Identities=15% Similarity=0.137 Sum_probs=206.8
Q ss_pred EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-cc-cc--c-cCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHH
Q 010250 101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HS-FW--N-RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAN 175 (514)
Q Consensus 101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~~-~~--~-~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~ 175 (514)
.|||..+ .|..++.+++++.+.+...... +. .+ . .......++.+.++++++....++++|++|+++++
T Consensus 20 ~yld~~~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l 93 (403)
T TIGR01979 20 VYLDSAA------TSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESI 93 (403)
T ss_pred EEEeCcc------ccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHH
Confidence 6888643 3446788999998876542111 11 00 0 01223456778888888543356899999999999
Q ss_pred HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250 176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY 252 (514)
Q Consensus 176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (514)
..++..+... .-..++.||+.+..|++..... ....|... ..++....+.
T Consensus 94 ~~~~~~~~~~----~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~------------~~v~~~~~~~----------- 146 (403)
T TIGR01979 94 NLVAYSWGDS----NLKAGDEIVISEMEHHANIVPWQLLAERTGATL------------KFIPLDDDGT----------- 146 (403)
T ss_pred HHHHHHhhhh----cCCCCCEEEECcchhhHHHHHHHHHHHhcCcEE------------EEEecCCCCC-----------
Confidence 8888754210 0023467887777666532111 11111110 0111110000
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCC
Q 010250 253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK 332 (514)
Q Consensus 253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~ 332 (514)
.+.+++++.+. +++.+|++..+++..|.+.| +++|.++|++||+++|+|++|+ +|.. . .+.....
T Consensus 147 --~~~~~l~~~i~----~~~~lv~~~~~~~~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~g~~--~--~~~~~~~ 211 (403)
T TIGR01979 147 --LDLDDLEKLLT----EKTKLVAITHVSNVLGTVNP----VEEIAKLAHQVGAKVLVDGAQA-VPHM--P--VDVQALD 211 (403)
T ss_pred --CCHHHHHHHhc----cCCeEEEEEcccccccccCC----HHHHHHHHHHcCCEEEEEchhh-cCcc--c--cCccccC
Confidence 11466766664 35677888878888898887 9999999999999999999996 4322 1 2222334
Q ss_pred Cchhc--hhhhhcCCcccceeEEeCHHHHHHhhhccCCC---Cc-------c---cccC-CCCCcHHHHHHHHHHHHHHh
Q 010250 333 PDLVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNTL---GS-------F---SHGF-TYSGHPVSCAVAIEALKIYK 396 (514)
Q Consensus 333 pDiv~--~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~---~~-------~---~~~~-t~~~~pl~~aaa~aal~~~~ 396 (514)
+|+++ +.|.++ + ..+|++++++++++.+.+..... .. + .... .-+.+..+.++..++++.+.
T Consensus 212 ~d~~~~s~~K~~g-p-~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~ 289 (403)
T TIGR01979 212 CDFYVFSGHKMYG-P-TGIGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLE 289 (403)
T ss_pred CCEEEEecccccC-C-CCceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHH
Confidence 68775 459664 3 45889999998877664210000 00 0 0000 01234455666677787765
Q ss_pred h---ccHHHHHHHHHHHHHhhhhhccCCCceeEE--EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe
Q 010250 397 E---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEI--RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV 471 (514)
Q Consensus 397 ~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v--~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~ 471 (514)
+ +.+.++..++.+++++.|+++....+.... ...+.++.+.+.... ...+.+.|.++||.++.
T Consensus 290 ~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~~------------~~~~~~~L~~~gI~v~~ 357 (403)
T TIGR01979 290 AIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEGVH------------PHDVGTILDEEGIAVRS 357 (403)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCCcC------------HHHHHHHHhhCCEEEcc
Confidence 4 345788888888888888765222222111 123556667664211 33567888899999874
Q ss_pred e-------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 472 S-------------GDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 472 ~-------------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+ +..+|++++...|++|+++++++|+++++.+
T Consensus 358 g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 358 GHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred hhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 2 3479999999999999999999999877643
No 168
>PRK08912 hypothetical protein; Provisional
Probab=99.82 E-value=7.1e-18 Score=174.25 Aligned_cols=337 Identities=14% Similarity=0.122 Sum_probs=200.7
Q ss_pred EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCC-eEEEeCChhHHHHHH
Q 010250 101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEANDTQ 178 (514)
Q Consensus 101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~-~v~~~~sGseA~~~A 178 (514)
..+||..|... ++ .+|.+.+++.+.+......+....+..+....+++.+.+.++ ..+.+ ++++++|+++|+..+
T Consensus 27 ~~i~l~~g~p~--~~-~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 103 (387)
T PRK08912 27 GAINLGQGFPD--DP-GPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAA 103 (387)
T ss_pred CeEEccCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHH
Confidence 46888877542 33 368888888887654211111111223333444444443332 12445 899999999999888
Q ss_pred HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHHH
Q 010250 179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLA 257 (514)
Q Consensus 179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 257 (514)
+.... ..++.|++.+++|.+........ |... ..++.+ ..|. .+.
T Consensus 104 ~~~~~--------~~gd~Vlv~~p~y~~~~~~~~~~-g~~~------------~~~~~~~~~~~-------------~~~ 149 (387)
T PRK08912 104 LLALV--------EPGDEVVLFQPLYDAYLPLIRRA-GGVP------------RLVRLEPPHWR-------------LPR 149 (387)
T ss_pred HHHhc--------CCCCEEEEeCCCchhhHHHHHHc-CCEE------------EEEecCcccCc-------------CCH
Confidence 87653 23468999999997764332221 1111 011111 0011 114
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc--eecccCCCC-c
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF--GCDKYSIKP-D 334 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~--~~~~~gv~p-D 334 (514)
+++++.+. ++..+.+++.| ++.+|.+. +.+.+++|.++|++||+++|+||+|..+-..+..+ .....+..+ +
T Consensus 150 ~~l~~~~~---~~~~~v~l~~p-~NPtG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 224 (387)
T PRK08912 150 AALAAAFS---PRTKAVLLNNP-LNPAGKVF-PREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERT 224 (387)
T ss_pred HHHHHHhC---ccceEEEEeCC-CCCcCccc-CHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCce
Confidence 66666553 22334555555 55566554 45789999999999999999999998663333211 111222221 2
Q ss_pred hh--chhhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHH
Q 010250 335 LV--SFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAP 409 (514)
Q Consensus 335 iv--~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~ 409 (514)
++ +|||.++ .| +++|++++++++++.+... ....+++.++....++.+++....+ +++.++++++.+
T Consensus 225 i~~~S~SK~~g~~G-lRiG~~~~~~~~~~~l~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 296 (387)
T PRK08912 225 VKIGSAGKIFSLTG-WKVGFVCAAPPLLRVLAKA-------HQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRD 296 (387)
T ss_pred EEEeechhhccCcC-ceeEEEecCHHHHHHHHHH-------HhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 32 6899888 45 8999999999999888642 1112355556556666665531111 245677788888
Q ss_pred HHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee---------CCEEEE
Q 010250 410 KFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS---------GDNIMM 478 (514)
Q Consensus 410 ~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~---------g~~iRi 478 (514)
.+.+.|+.. ...+ .... |.++++.+....... ....++..|+ ++||.+.++ .+++|+
T Consensus 297 ~l~~~L~~~-g~~~---~~~~g~~~l~~~l~~~~~~~--------~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl 364 (387)
T PRK08912 297 RLAAGLRRI-GFPV---LPSQGTYFLTVDLAPLGLAE--------DDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRF 364 (387)
T ss_pred HHHHHHHhC-CCcc---cCCCcceEEEecccccCCCC--------CHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEE
Confidence 888888765 2221 1223 456677765411000 1345777765 579998863 157999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHH
Q 010250 479 SPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 479 ~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
+ +..+++++++++++|.++++
T Consensus 365 ~--~~~~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 365 C--FAKRDATLDEAVERLAAARR 385 (387)
T ss_pred E--EeCCHHHHHHHHHHHHHHHh
Confidence 9 66679999999999988775
No 169
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.82 E-value=7.2e-18 Score=171.79 Aligned_cols=330 Identities=12% Similarity=0.074 Sum_probs=197.7
Q ss_pred EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCC-eEEEeCChhHHHHHH
Q 010250 101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEANDTQ 178 (514)
Q Consensus 101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~-~v~~~~sGseA~~~A 178 (514)
+.+||.+|.. .++ ..|++.+++.+.......|... .+..+....+++.+...++ ..+.+ +|++++++++|+..+
T Consensus 1 ~~~~~~~g~p--~~~-~~~~~~~~~~~~~~~~~~Y~~~-~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~ 76 (350)
T TIGR03537 1 RLFDFGTGDP--KEP-TPPFIRKALIDAVPEVSQYPSA-LGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHF 76 (350)
T ss_pred CeEeccCCCC--CCC-CCHHHHHHHHHHHhccCCCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHH
Confidence 3678887753 344 3788999988876543222111 1222333444444443322 13445 899999999999888
Q ss_pred HHHHHHHHhhcCCCC--ccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCChhHHHH
Q 010250 179 VKLVWYYNNALGRPN--KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEYST 254 (514)
Q Consensus 179 lk~a~~~~~~~~~~~--~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 254 (514)
+.... .++ ++.|++.+++|.+........+.... .++.. ..|.
T Consensus 77 ~~~~~-------~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~-------------~v~~~~~~~~~------------- 123 (350)
T TIGR03537 77 PLVFI-------DPEEDRRRVIFGTPGYPVYERGALFAGGEPT-------------AVKLKKEDGFL------------- 123 (350)
T ss_pred HHHHc-------CCCCCCceEEEcCCCCcchHHHHHhcCCEEE-------------EcccCcccCCc-------------
Confidence 76552 122 25899999999887544433222111 01110 0010
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCc
Q 010250 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPD 334 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pD 334 (514)
.+++++++++.. ++.++++.+.++.+|.+. +.+.+++|.++|++||+++|+||+|..+...+........ .+|
T Consensus 124 ~d~~~l~~~~~~----~~~~i~i~~p~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~ 196 (350)
T TIGR03537 124 LRLEKVEKSILE----ETKIVWINYPHNPTGATA-PRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEV--GIE 196 (350)
T ss_pred cCHHHHHHhhhh----ccEEEEEeCCCCCcCccc-CHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhc--CcC
Confidence 124667766642 344555555566777554 6688999999999999999999999754221211111111 222
Q ss_pred -hh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHH
Q 010250 335 -LV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAP 409 (514)
Q Consensus 335 -iv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~ 409 (514)
++ +|||.++..++++|++++++++++.+... ....+.+.++++..++.+++..-+ .++..++++++.+
T Consensus 197 ~~i~~~s~SK~~g~~GlRiG~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~ 269 (350)
T TIGR03537 197 NVLAFHSLSKRSGMTGYRSGFVAGDEKLISFLRKL-------RANFGVASPDFVQAAAKAAWSDDNHVLERRKIFKRKRD 269 (350)
T ss_pred CEEEEeecccccCCccccceeeecCHHHHHHHHHH-------HHhhccCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 22 58998865448999999999988887642 111233445566666666654100 0234556666777
Q ss_pred HHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------CCEEEEeCC
Q 010250 410 KFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------GDNIMMSPP 481 (514)
Q Consensus 410 ~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------g~~iRi~p~ 481 (514)
.+.+.|++. .+ ..... -|.++++++.+.. ....+++.|.++||.+.++ .+.+|++
T Consensus 270 ~~~~~l~~~---g~-~~~~~~g~~~~~~~~~~~~-----------~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~-- 332 (350)
T TIGR03537 270 LFIEFFNKV---GL-EYLYPDATFYLWVKVPSGI-----------DAKDYALRLLENGIVVAPGENFGSGEEGYVRVA-- 332 (350)
T ss_pred HHHHHHHHC---CC-cccCCCeEEEEEEECCCCC-----------CHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEE--
Confidence 777777654 21 11122 3556677775421 1346888899999999863 2569999
Q ss_pred CCCCHHHHHHHHHHHHH
Q 010250 482 FIMSPEEVDELISKYGK 498 (514)
Q Consensus 482 ~~~t~e~id~~~~~l~~ 498 (514)
+..+++++++++++|++
T Consensus 333 ~~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 333 LVPTLEECEEALRLWER 349 (350)
T ss_pred ecCCHHHHHHHHHHHhc
Confidence 55788999999988875
No 170
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.82 E-value=1.3e-17 Score=172.41 Aligned_cols=340 Identities=14% Similarity=0.097 Sum_probs=205.9
Q ss_pred EEEccCCcccccCCCCCHHHHHHHHHHHhcCCc-cccccccCCchHHHHHHHHHHhcCc-CC-CCeEEEeCChhHHHHHH
Q 010250 102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFTA-SK-MAKVFFTNSGSEANDTQ 178 (514)
Q Consensus 102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~-~~~~~~~~~~~~~ela~~L~~~~~~-~~-~~~v~~~~sGseA~~~A 178 (514)
++|+..|.. .+. .++.+.+|+.+.+..... .+....+..+....+++.+.+.++. .+ .+.+++++++++++..+
T Consensus 29 ~~~l~~g~~--~~~-~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~ 105 (389)
T PRK05957 29 TISLGQGVV--SYP-PPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNA 105 (389)
T ss_pred eEEccCCCC--CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHH
Confidence 577766542 244 477889999887754321 1222233445666778888777642 12 56899999999999888
Q ss_pred HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250 179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258 (514)
Q Consensus 179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (514)
+.... ..++.|++.+++|.+....... .|... ..++....|. .+.+
T Consensus 106 ~~~~~--------~~gd~Vlv~~P~y~~~~~~~~~-~g~~~------------~~v~~~~~~~-------------~d~~ 151 (389)
T PRK05957 106 ILAIT--------DPGDEIILNTPYYFNHEMAITM-AGCQP------------ILVPTDDNYQ-------------LQPE 151 (389)
T ss_pred HHHhc--------CCCCEEEEeCCCCcCHHHHHHh-cCCEE------------EEeecCCCCC-------------cCHH
Confidence 87653 3346799988988665322111 11111 1111111111 1246
Q ss_pred HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-cee-cccCCCCc--
Q 010250 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGC-DKYSIKPD-- 334 (514)
Q Consensus 259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~-~~~gv~pD-- 334 (514)
++++.+. +++.+|++...++.+|.+. +++.+++|.++|++||+++|+||++..|...+.. ... ...+..+.
T Consensus 152 ~l~~~i~----~~~klv~~~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i 226 (389)
T PRK05957 152 AIEQAIT----PKTRAIVTISPNNPTGVVY-PEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTI 226 (389)
T ss_pred HHHHhcC----cCceEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEE
Confidence 6776653 2344545554566677655 4578999999999999999999999877433211 111 11121222
Q ss_pred -hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--hccHHHHHHHHHHHH
Q 010250 335 -LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKIAPKF 411 (514)
Q Consensus 335 -iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~~~~~~~~~~~~~~l 411 (514)
+-+|||.++..++++|++++++++++.+... ......+.+.+++.++..+|+.-. -++..+.++++.+.+
T Consensus 227 ~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l 299 (389)
T PRK05957 227 SLYSLSKAYGFASWRIGYMVIPIHLLEAIKKI-------QDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQIL 299 (389)
T ss_pred EEecchhhccCccceeEEEecCHHHHHHHHHH-------HhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 3368998874338999999999999888742 111233445566666666664210 123345567777777
Q ss_pred HhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEEEeCCC
Q 010250 412 QDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMMSPPF 482 (514)
Q Consensus 412 ~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iRi~p~~ 482 (514)
.+.|+++... ....... |.++++.+..... ...+++.|. ++||.+.++ ++++|++..
T Consensus 300 ~~~L~~~~~~--~~~~~~~gg~~~~~~~~~~~~-----------~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~- 365 (389)
T PRK05957 300 LKSLGQLQDR--CTLHPANGAFYCFLKVNTDLN-----------DFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYG- 365 (389)
T ss_pred HHHHHhcCCC--ccccCCCeeEEEEEeCCCCCC-----------hHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEe-
Confidence 7777765221 1111122 5667777643211 345777776 589999875 246999942
Q ss_pred CCCHHHHHHHHHHHHHHHHHHH
Q 010250 483 IMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 483 ~~t~e~id~~~~~l~~~l~~~~ 504 (514)
..+++++++++++|.+.++++.
T Consensus 366 ~~~~~~l~~~~~~l~~~~~~~~ 387 (389)
T PRK05957 366 ALQKATAKEGIERLVQGLKTIV 387 (389)
T ss_pred cCCHHHHHHHHHHHHHHHHhhh
Confidence 3589999999999998887654
No 171
>PLN02187 rooty/superroot1
Probab=99.82 E-value=5.1e-18 Score=178.48 Aligned_cols=352 Identities=14% Similarity=0.092 Sum_probs=208.4
Q ss_pred CCCCEEEEccCCcccccCC-C-CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-----cCCCCeEEEeC
Q 010250 97 VNGKKYLDSLAGLWCTALG-G-SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-----ASKMAKVFFTN 169 (514)
Q Consensus 97 ~dG~~ylD~~s~~~~~~lG-h-~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-----~~~~~~v~~~~ 169 (514)
.+++.+|++..|.. ..+. . .++++.+++.+.++..... . + .+.....++.+.+++++. ....++|++++
T Consensus 63 ~~~~~vi~l~~Gdp-~~~p~~~~~~~~~~~~~~~~~~~~~~-~-Y-~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~ 138 (462)
T PLN02187 63 DVNKTILPLGHGDP-SVYPCFRTCIEAEDAVVDVLRSGKGN-S-Y-GPGAGILPARRAVADYMNRDLPHKLTPEDIFLTA 138 (462)
T ss_pred CCCCCeEECCCCCC-CCCCCCCCCHHHHHHHHHHHhCCCCC-C-C-CCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeC
Confidence 34678888876622 1112 1 3567899998888653211 0 1 122223445555555542 23568999999
Q ss_pred ChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCC
Q 010250 170 SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGE 247 (514)
Q Consensus 170 sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 247 (514)
++++|+..++.... ...+.|++.+++|.+........ |.... .++.. +.|.
T Consensus 139 G~~~al~~~~~~l~--------~pGd~Vlv~~P~y~~y~~~~~~~-g~~~~------------~~~l~~~~~~~------ 191 (462)
T PLN02187 139 GCNQGIEIVFESLA--------RPNANILLPRPGFPHYDARAAYS-GLEVR------------KFDLLPEKEWE------ 191 (462)
T ss_pred CHHHHHHHHHHHhc--------CCCCEEEEeCCCCccHHHHHHHc-CCEEE------------EEeCccccCCc------
Confidence 99999999998763 34578999999998864322221 11110 11110 0111
Q ss_pred ChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-ee
Q 010250 248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GC 326 (514)
Q Consensus 248 ~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~ 326 (514)
.++++|++++. ++..+.+++.|. +.+|.+ .+.+.+++|.++|++||+++|+||+|..|-..|..+ ..
T Consensus 192 -------~d~~~l~~~~~---~~~~~v~i~nP~-NPTG~v-~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~ 259 (462)
T PLN02187 192 -------IDLEGIEAIAD---ENTVAMVVINPN-NPCGNV-YSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSM 259 (462)
T ss_pred -------cCHHHHHHhcC---CCcEEEEEeCCC-CCCCCc-cCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeH
Confidence 11466766553 345678888886 455544 467889999999999999999999999864434322 11
Q ss_pred cccCCCCchh---chhhhhcCCcccceeEEeC-HH-H---HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-
Q 010250 327 DKYSIKPDLV---SFAKALSSAYMPIGAILVS-PE-V---SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE- 397 (514)
Q Consensus 327 ~~~gv~pDiv---~~sK~l~gG~~pig~v~~~-~~-i---~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~- 397 (514)
..+.-...++ +|||.++..++++|++++. ++ + ++.+.... . ....+.+.+.+++.++.++|+...+
T Consensus 260 ~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~----~-~~~~~~~~s~~~Q~a~~~~L~~~~~~ 334 (462)
T PLN02187 260 GKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIK----Q-NLDVTPDPATIIQAALPAILEKADKN 334 (462)
T ss_pred HHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHHHHHHH----H-hccccCCCCHHHHHHHHHHHhcCcHH
Confidence 1111111233 6899866544999999983 32 2 23333210 0 1112223467778888777752111
Q ss_pred --ccHHHHHHHHHHHHHhhhhhccCCCcee-E-EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC
Q 010250 398 --RNIVEQVNKIAPKFQDGVKAFSDSPIIG-E-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG 473 (514)
Q Consensus 398 --~~~~~~~~~~~~~l~~~L~~l~~~~~~~-~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g 473 (514)
++..+.++++.+.+.+.|+++ +... . ...-|.++.+.+....... .. ...+.+...+.++||++.|+.
T Consensus 335 ~l~~~~~~l~~~r~~l~~~L~~~---~~~~~~~~P~gg~fl~~~l~~~~~~~--~~---~~~~~~~~ll~~~gV~v~pG~ 406 (462)
T PLN02187 335 FFAKKNKILKHNVDLVCDRLKDI---PCVVCPKKPESCTYLLTKLELSLMDN--IK---DDIDFCVKLAREENLVFLPGD 406 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC---CCCcCCCCCCEeEEEEeecChhhCCC--CC---CHHHHHHHHHhhCCEEEECcc
Confidence 234556677777777777765 2221 1 1223566777664211000 00 012234456688999998752
Q ss_pred -----CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250 474 -----DNIMMSPPFIMSPEEVDELISKYGKALKATEER 506 (514)
Q Consensus 474 -----~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~ 506 (514)
++|||+ +..+++.+++++++|.+++++..++
T Consensus 407 ~fg~~~~iRis--~~~~~e~l~~al~rL~~~l~~~~~~ 442 (462)
T PLN02187 407 ALGLKNWMRIT--IGVEAHMLEDALERLKGFCTRHAKK 442 (462)
T ss_pred ccCCCCeEEEE--eCCCHHHHHHHHHHHHHHHHHhhhc
Confidence 579999 6678999999999999999876643
No 172
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.82 E-value=1.3e-17 Score=172.78 Aligned_cols=338 Identities=13% Similarity=0.072 Sum_probs=201.6
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc--CCC-CeEEEeCChhHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA--SKM-AKVFFTNSGSEA 174 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~--~~~-~~v~~~~sGseA 174 (514)
.|+.++||..|.. .++ .++.+.+++.+.+.....|... .+..+....+++.+.+.++. ... ++|++++|+++|
T Consensus 27 ~~~~~i~l~~~~p--~~~-~~~~~~~~~~~~~~~~~~Y~~~-~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~a 102 (396)
T PRK09147 27 ADLPPISLSIGEP--KHP-TPAFIKDALAANLDGLASYPTT-AGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREA 102 (396)
T ss_pred cCCCeEecCCCCC--CCC-CCHHHHHHHHHHhhhhcCCCCC-CCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHH
Confidence 4889999987753 344 3678889988776543222211 22333444555555444331 233 489999999999
Q ss_pred HHHHHHHHHHHHhhcCCC--CccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250 175 NDTQVKLVWYYNNALGRP--NKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY 252 (514)
Q Consensus 175 ~~~Alk~a~~~~~~~~~~--~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (514)
+..+++... . + +++.|++.+++|.+........+. .. ..+++... +.|
T Consensus 103 l~~~~~~l~------~-~~~~gd~vlv~~P~y~~~~~~~~~~g~-~~------------~~vp~~~~----------~~~ 152 (396)
T PRK09147 103 LFAFAQTVI------D-RDGPGPLVVCPNPFYQIYEGAALLAGA-EP------------YFLNCDPA----------NNF 152 (396)
T ss_pred HHHHHHHHc------C-CCCCCCEEEEcCCCccchHHHHHhcCC-EE------------EEeccCcc----------ccC
Confidence 999988663 1 2 146799999999876433222111 11 11111100 001
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc--cce-e---
Q 010250 253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--MFG-C--- 326 (514)
Q Consensus 253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~--~~~-~--- 326 (514)
..+.+.+++.+.. +..+.+++.| ++.+|.+. +++.+++|.++|++||+++|.||+|..|-..+. ... .
T Consensus 153 -~~d~~~l~~~~~~---~~k~i~l~nP-~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 226 (396)
T PRK09147 153 -APDFDAVPAEVWA---RTQLLFVCSP-GNPTGAVL-PLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAA 226 (396)
T ss_pred -ccCHHHHHHHHhh---ccEEEEEcCC-CCCcCccC-CHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhc
Confidence 0124566555432 2334455555 55566544 678999999999999999999999987633331 111 0
Q ss_pred cccCCC--Cchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccH
Q 010250 327 DKYSIK--PDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNI 400 (514)
Q Consensus 327 ~~~gv~--pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~ 400 (514)
...+.. +.++ +|||.++..++++|++++++++++.+... ....+++.+++.+.++.+++..-+ -.+.
T Consensus 227 ~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~~~~~~-------~~~~~~~~~~~~q~a~~~~~~~~~~~~~~ 299 (396)
T PRK09147 227 AELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLKKFLLY-------RTYHGCAMPPAVQAASIAAWNDEAHVREN 299 (396)
T ss_pred cccCccccccEEEEeccccccCCccceeeeecCCHHHHHHHHHH-------hhhcccCCCHHHHHHHHHHhcchhHHHHH
Confidence 011111 1222 68997655449999999999998887631 111245567777777777663110 0123
Q ss_pred HHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------
Q 010250 401 VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS------- 472 (514)
Q Consensus 401 ~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~------- 472 (514)
.+.++++.+.+.+.|++. ... .....|.++++++.. . ...++..++ ++||.+.++
T Consensus 300 ~~~~~~~~~~~~~~L~~~--~~~--~~p~~g~f~~~~~~~-~------------~~~~~~~ll~~~gv~v~pg~~f~~~~ 362 (396)
T PRK09147 300 RALYREKFDAVTPILAPV--LDV--QLPDAGFYLWAKVPG-D------------DTEFARRLYADYNVTVLPGSYLAREA 362 (396)
T ss_pred HHHHHHHHHHHHHHHHHh--cCC--CCCCeeEEEEEECCC-C------------HHHHHHHHHHhCCEEEeCCccccccc
Confidence 455666666666666553 111 122357778888751 0 234666665 689998753
Q ss_pred ------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 473 ------GDNIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 473 ------g~~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
.+.+||+ +..+++++++++++|.+++.
T Consensus 363 ~~~~~~~~~iRi~--~~~~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 363 HGVNPGAGRVRIA--LVAPLAECVEAAERIVDFCR 395 (396)
T ss_pred cCCCCCCCeEEEE--ecCCHHHHHHHHHHHHHHhc
Confidence 1469999 66789999999999988763
No 173
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.82 E-value=6e-18 Score=175.02 Aligned_cols=337 Identities=15% Similarity=0.145 Sum_probs=200.6
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc----C-cCCCCeEEEeCChhHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----T-ASKMAKVFFTNSGSEA 174 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~----~-~~~~~~v~~~~sGseA 174 (514)
..++||..|. ..++. ++.+.+++.+.+......+. +.....+|.+.+++++ + ....+++++++|+++|
T Consensus 33 ~~~i~l~~~~--~~~~~-~~~~~~~~~~~~~~~~~~Y~----~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 105 (391)
T PRK08361 33 ENVISLGIGE--PDFDT-PKNIKEAAKRALDEGWTHYT----PNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEA 105 (391)
T ss_pred cCeEEcCCCC--CCCCC-CHHHHHHHHHHHhcCCCCCC----CCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHH
Confidence 3578987764 33443 67888988887764221111 1122334445555443 2 2345799999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250 175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254 (514)
Q Consensus 175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
+..+++... ..++.|++.+++|.+...... ..|.... .++.... ..+ .
T Consensus 106 l~~~~~~l~--------~~g~~Vlv~~p~y~~~~~~~~-~~g~~~~------------~v~~~~~----------~~~-~ 153 (391)
T PRK08361 106 TYLAFESLL--------EEGDEVIIPDPAFVCYVEDAK-IAEAKPI------------RIPLREE----------NEF-Q 153 (391)
T ss_pred HHHHHHHhc--------CCCCEEEEcCCCCcccHHHHH-HcCCEEE------------EEecCCc----------cCC-C
Confidence 999887653 234689999999877532221 1221110 0111000 000 0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-ceecccCCCC
Q 010250 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGCDKYSIKP 333 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~~~~gv~p 333 (514)
.+++++++.+. +++.++++...++.+|.+. +.+.+++|.++|+++++++|+||++..|...+.. ..........
T Consensus 154 ~d~~~l~~~i~----~~~~~v~i~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 228 (391)
T PRK08361 154 PDPDELLELIT----KRTRMIVINYPNNPTGATL-DKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDN 228 (391)
T ss_pred CCHHHHHHhcc----cccEEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCC
Confidence 12466766654 2344455554466677655 5678899999999999999999999876332221 1111111112
Q ss_pred chh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh----ccHHHHHHHH
Q 010250 334 DLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE----RNIVEQVNKI 407 (514)
Q Consensus 334 Div--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~----~~~~~~~~~~ 407 (514)
+++ +|||.++..++++|++++++++++.+... ....+++.+.+.+.++.++|+.-.. ++..+.++++
T Consensus 229 ~i~~~s~SK~~~~~GlRiG~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 301 (391)
T PRK08361 229 TILANSFSKTFAMTGWRLGFVIAPEQVIKDMIKL-------HAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNER 301 (391)
T ss_pred EEEEecCchhcCCcHhhhhhhccCHHHHHHHHHH-------HhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHH
Confidence 233 68998874338999999999998877531 1112345566777777666642111 2334556666
Q ss_pred HHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEEE
Q 010250 408 APKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMM 478 (514)
Q Consensus 408 ~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iRi 478 (514)
.+.+.+.|+++ +.+...... |.++++.+.+... ....+...|+ ++||.+.++ .+.+|+
T Consensus 302 ~~~~~~~L~~~---~~~~~~~p~g~~~~~~~l~~~~~----------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi 368 (391)
T PRK08361 302 RKLVLKRLKEM---PHIKVFEPKGAFYVFANIDETGM----------SSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRI 368 (391)
T ss_pred HHHHHHHHHhC---CCCeecCCCEEEEEEEECCCCCC----------CHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEE
Confidence 67777777664 222222333 4566677753111 0334667776 579999864 146999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 479 SPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 479 ~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
+ +..+++++++++++|.+++++
T Consensus 369 ~--~~~~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 369 S--YATSKEKLIEAMERMEKALEE 390 (391)
T ss_pred E--ecCCHHHHHHHHHHHHHHHhc
Confidence 9 567889999999999988764
No 174
>PRK02948 cysteine desulfurase; Provisional
Probab=99.82 E-value=4.4e-18 Score=175.46 Aligned_cols=334 Identities=18% Similarity=0.197 Sum_probs=203.0
Q ss_pred EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-cc---ccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250 101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HS---FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 176 (514)
Q Consensus 101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~~---~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~ 176 (514)
.|||..+. |.-++.+++++.+.++..... +. ......+...++.+.++++++. +.+.|+|++|+++++.
T Consensus 2 ~yld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~-~~~~i~~~~g~t~a~~ 74 (381)
T PRK02948 2 IYLDYAAT------TPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGG-EEQGIYFTSGGTESNY 74 (381)
T ss_pred EeccCCCC------CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCC-CCCeEEEeCcHHHHHH
Confidence 47775433 456899999999887642111 11 0011124456777888888743 4578999999999999
Q ss_pred HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee---ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHH
Q 010250 177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA---SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS 253 (514)
Q Consensus 177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~---~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (514)
.++..+.... . .+++.|++ ....|.+..... ...|.. +..++.... .
T Consensus 75 ~~~~~~~~~~---~-~~g~~vv~-~~~~h~s~~~~~~~~~~~g~~------------v~~v~~~~~-------------~ 124 (381)
T PRK02948 75 LAIQSLLNAL---P-QNKKHIIT-TPMEHASIHSYFQSLESQGYT------------VTEIPVDKS-------------G 124 (381)
T ss_pred HHHHHHHHhc---c-CCCCEEEE-CCcccHHHHHHHHHHHhCCCE------------EEEEeeCCC-------------C
Confidence 9988764210 0 12344554 444444322211 111111 011111110 1
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCC
Q 010250 254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKP 333 (514)
Q Consensus 254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~p 333 (514)
+.++++|++.+. +++.+|+++.+++++|.+.| +++|.++|+++|+++|+|++|+ ||..+ ...+.+ ..
T Consensus 125 ~~d~~~l~~~l~----~~~~lv~~~~~~n~tG~~~~----~~~I~~l~~~~~~~vivD~~~~-~g~~~--~~~~~~--~~ 191 (381)
T PRK02948 125 LIRLVDLERAIT----PDTVLASIQHANSEIGTIQP----IAEIGALLKKYNVLFHSDCVQT-FGKLP--IDVFEM--GI 191 (381)
T ss_pred CCCHHHHHHhcC----CCCEEEEEECCcCCcEeehh----HHHHHHHHHHcCCEEEEEChhh-ccccc--cCcccC--CC
Confidence 112567776663 34678888888999999987 8999999999999999999886 76442 222333 35
Q ss_pred chh--chhhhhcCCcccceeEEeCHHH-HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHH
Q 010250 334 DLV--SFAKALSSAYMPIGAILVSPEV-SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIA 408 (514)
Q Consensus 334 Div--~~sK~l~gG~~pig~v~~~~~i-~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~ 408 (514)
|++ +++|.++. ..+|++++++++ +..+.......+.+ ..++.|..+.+++.++++.+.+ ++..++++++.
T Consensus 192 d~~~~s~~K~~gp--~G~G~l~~~~~~~~~~~~~~~~~~~~~---~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~ 266 (381)
T PRK02948 192 DSLSVSAHKIYGP--KGVGAVYINPQVRWKPVFPGTTHEKGF---RPGTVNVPGIAAFLTAAENILKNMQEESLRFKELR 266 (381)
T ss_pred CEEEecHHhcCCC--CcEEEEEEcCCCCCCCcccCCCCCCCc---CCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 766 56797653 347888888775 11111100000111 1345677788888888876532 35678888899
Q ss_pred HHHHhhhhhccCCCceeEEEe-----eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----------
Q 010250 409 PKFQDGVKAFSDSPIIGEIRG-----TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------- 472 (514)
Q Consensus 409 ~~l~~~L~~l~~~~~~~~v~g-----~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------- 472 (514)
+++++.|+++ ...+. ..+ ...++.+.+... ....+...|.++||.++.+
T Consensus 267 ~~l~~~L~~~-~~~v~--~~~~~~~~~~~i~~~~~~~~------------~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~ 331 (381)
T PRK02948 267 SYFLEQIQTL-PLPIE--VEGHSTSCLPHIIGVTIKGI------------EGQYTMLECNRRGIAISTGSACQVGKQEPS 331 (381)
T ss_pred HHHHHHHhcC-CCCEE--EeCCCccCcCCEEEEEeCCC------------CHHHHHHhcccCCEEEEchHhcCCCCCCCC
Confidence 9999998876 22211 111 111233333211 0334666788899999842
Q ss_pred -------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 473 -------------GDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 473 -------------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
++.||+++...+|++|+|++++.|+++++++-
T Consensus 332 ~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 376 (381)
T PRK02948 332 KTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQFY 376 (381)
T ss_pred HHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 24699999999999999999999998876553
No 175
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.82 E-value=3.6e-18 Score=174.44 Aligned_cols=320 Identities=13% Similarity=0.061 Sum_probs=196.8
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC--cCCCCeEEEeCChhHHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT--ASKMAKVFFTNSGSEAN 175 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~--~~~~~~v~~~~sGseA~ 175 (514)
++..++|+.+|. +....+|.+.+++.+...... |.. ..+..+...++++.+.+..+ +...+++++++|+++++
T Consensus 19 ~~~~~i~l~~~~---p~~~~~~~~~~~~~~~~~~~~-Y~~-~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i 93 (357)
T TIGR03539 19 HPDGIVDLSVGT---PVDPVPPLIRAALAAAADAPG-YPQ-TWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELV 93 (357)
T ss_pred CCCCeEEccCCC---CCCCCCHHHHHHHHHHHhhCC-CCc-ccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHH
Confidence 466789998873 334357888888877654321 211 12233445556666655433 24568999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250 176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255 (514)
Q Consensus 176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (514)
..++.+.. . ..++.|++.+++|.+........ |.... .+++
T Consensus 94 ~~~~~~l~------~-~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~--------------~v~~----------------- 134 (357)
T TIGR03539 94 AWLPTLLG------L-GPGDTVVIPELAYPTYEVGALLA-GATPV--------------AADD----------------- 134 (357)
T ss_pred HHHHHHHc------C-CCCCEEEECCCCcHHHHHHHHhc-CCEEe--------------ccCC-----------------
Confidence 88776541 1 23568999999998764332221 11100 0000
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-ecc--cCCC
Q 010250 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDK--YSIK 332 (514)
Q Consensus 256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~--~gv~ 332 (514)
.+.++ ++++++++++..++.+|.+. +.+.+++|.++|++||+++|+||+|..|...+.... ... .+..
T Consensus 135 -~~~l~-------~~~~~~v~~~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 205 (357)
T TIGR03539 135 -PTELD-------PVGPDLIWLNSPGNPTGRVL-SVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGD 205 (357)
T ss_pred -hhhcC-------ccCccEEEEeCCCCCcCccC-CHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCc
Confidence 11111 13456677666666777655 557899999999999999999999987755443211 110 1111
Q ss_pred -Cc-hh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHH
Q 010250 333 -PD-LV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKI 407 (514)
Q Consensus 333 -pD-iv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~ 407 (514)
.. ++ +|||.++.+++++|++++++++++.+... .....++.+.+++.++.++|+... .+...+.++++
T Consensus 206 ~~~vi~~~S~SK~~~~~G~R~G~~i~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 278 (357)
T TIGR03539 206 HTGLLAVHSLSKRSNLAGYRAGFVAGDPALVAELLTV-------RKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAAR 278 (357)
T ss_pred cccEEEEeccccccCCCceeEEEEecCHHHHHHHHHH-------HhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 11 33 68998754339999999999998887631 122345567777777777774211 12345666777
Q ss_pred HHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------CCEEEEe
Q 010250 408 APKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------GDNIMMS 479 (514)
Q Consensus 408 ~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------g~~iRi~ 479 (514)
.+.+.+.|++. ...+ ..+. |.++++.+..+ ...+.+.|.++||.+.++ .+.|||+
T Consensus 279 ~~~~~~~L~~~-g~~~---~~p~~~~~~~~~~~~~-------------~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis 341 (357)
T TIGR03539 279 RAQLKPALEKA-GFRI---DHSEAGLYLWATRGED-------------AWDTVDRLAELGILVAPGDFYGPAGSQHVRVA 341 (357)
T ss_pred HHHHHHHHHHc-CCCC---cCCCccEEEEEECCCC-------------HHHHHHHHHhCCEEECCccccCCCCCCeEEEE
Confidence 77777777664 2221 1122 44555554211 334778889999999864 2579999
Q ss_pred CCCCCCHHHHHHHHHHH
Q 010250 480 PPFIMSPEEVDELISKY 496 (514)
Q Consensus 480 p~~~~t~e~id~~~~~l 496 (514)
+..+++++++++++|
T Consensus 342 --~~~~~~~i~~~~~~l 356 (357)
T TIGR03539 342 --LTATDERIAAAVARL 356 (357)
T ss_pred --ecCCHHHHHHHHHhh
Confidence 556889999999876
No 176
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.82 E-value=4.8e-18 Score=177.92 Aligned_cols=327 Identities=14% Similarity=0.093 Sum_probs=202.2
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc--CCCCeEEEeCChhHHHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA--SKMAKVFFTNSGSEANDT 177 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~--~~~~~v~~~~sGseA~~~ 177 (514)
...+||.+| .+..-..|.+.+++.+.+.....| + ......+|.+.+++++.. ...++|++++|+.+|+..
T Consensus 85 ~~~i~L~~g---~p~~~~~p~~~~~~~~~~~~~~~Y----~-~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~ 156 (431)
T PRK15481 85 TPLHDLAGG---NPDPQRLPDLSRYFARLSRTPRLY----G-DAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIER 156 (431)
T ss_pred chhhhhhcC---CCChhHhHHHHHHHHHhhhhhhhc----C-CcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHH
Confidence 345677655 222223466777776655432222 1 122234566666666531 123589999999999999
Q ss_pred HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
+++... ..++.|++.+++|.+........+.... .++... +. .+.
T Consensus 157 ~~~~l~--------~pgd~Vlv~~P~y~~~~~~~~~~g~~~~-------------~v~~~~-----------~g---~~~ 201 (431)
T PRK15481 157 LLCAHL--------LPGDSVAVEDPCFLSSINMLRYAGFSAS-------------PVSVDA-----------EG---MQP 201 (431)
T ss_pred HHHHhC--------CCCCEEEEeCCCcHHHHHHHHHcCCeEE-------------eeccCC-----------CC---CCH
Confidence 988663 3357899999999887543333222110 111100 00 114
Q ss_pred HHHHHHHHHhCCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHHHhc-CCEEEEechhcCcccccccceecccCCCCch
Q 010250 258 NNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKY-DILFIADEVICAFGRLGTMFGCDKYSIKPDL 335 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEp-v~~~~G~~~p~~~~L~~l~~l~~~~-gillI~DEv~tG~gr~G~~~~~~~~gv~pDi 335 (514)
++|++++.. ++.++++.| .++.+|.+. +.+.+++|.++|++| ++++|.||+|..|...+..-... ...+.+
T Consensus 202 ~~l~~~~~~----~~k~i~~~p~p~NPTG~~~-s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~--~~~~~v 274 (431)
T PRK15481 202 EKLERALAQ----GARAVILTPRAHNPTGCSL-SARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIP--QTTQRW 274 (431)
T ss_pred HHHHHHHhc----CCCEEEECCCCCCCCCccC-CHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCc--CCCCCE
Confidence 677777642 344445543 345556554 568889999999999 99999999998774322111111 112333
Q ss_pred h---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh----ccHHHHHHHHH
Q 010250 336 V---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE----RNIVEQVNKIA 408 (514)
Q Consensus 336 v---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~----~~~~~~~~~~~ 408 (514)
+ +|||.++.| +++|++++++++++.+... ....+++.+.+++.++.++|+.-.- ++..+.++++.
T Consensus 275 i~~~SfSK~~~~G-lRiG~~i~~~~~~~~~~~~-------~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r 346 (431)
T PRK15481 275 ALIRSVSKALGPD-LRLAFVASDSATSARLRLR-------LNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRR 346 (431)
T ss_pred EEEeeeccccCCC-ceeEEEeCCHHHHHHHHHH-------HhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 3 689999855 9999999999998888631 1112345678888888887753110 13456667777
Q ss_pred HHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--------CCEEEEeC
Q 010250 409 PKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--------GDNIMMSP 480 (514)
Q Consensus 409 ~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--------g~~iRi~p 480 (514)
+.+.+.|++. .+......-|.++++.+.+. ...+...|.++||.+.++ +++|||+.
T Consensus 347 ~~~~~~L~~~---~~~~~~p~gg~f~~~~l~~~-------------~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~ 410 (431)
T PRK15481 347 QKLARALQQY---GIAIPSPGDGLNLWLPLDTD-------------SQATALTLAKSGWLVREGEAFGVSAPSHGLRITL 410 (431)
T ss_pred HHHHHHHHHc---CCccccCCCeEEEEEECCCC-------------HHHHHHHHHHCCcEEecCCccccCCCCCeEEEEc
Confidence 7777777664 22111234577788877531 235778888999999873 14699995
Q ss_pred CCCCCHHHHHHHHHHHHHHHH
Q 010250 481 PFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 481 ~~~~t~e~id~~~~~l~~~l~ 501 (514)
. ..+++++++++++|.+++.
T Consensus 411 ~-~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 411 S-TLNDAEINRLAADLHQALN 430 (431)
T ss_pred C-CCChHHHHHHHHHHHHHhc
Confidence 3 2578999999999998874
No 177
>PRK07683 aminotransferase A; Validated
Probab=99.82 E-value=1.8e-17 Score=171.19 Aligned_cols=337 Identities=15% Similarity=0.116 Sum_probs=197.5
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCC-eEEEeCChhHHHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEANDT 177 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~-~v~~~~sGseA~~~ 177 (514)
..++||..|... ++ .++.+.+++.+.++.....+....+..+....+++.+.+..+ ..+.+ ++++++|+++|+..
T Consensus 28 ~~~i~l~~~~p~--~~-~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~ 104 (387)
T PRK07683 28 DNLISLTIGQPD--FP-TPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDI 104 (387)
T ss_pred CCeEEecCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 457888777421 33 367889999998865321111111223333344444433322 12445 89999999999999
Q ss_pred HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHH
Q 010250 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRL 256 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 256 (514)
+++... ..++.|++.+++|.+........ |.... .++.. ..|. .+
T Consensus 105 ~~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~------------~~~~~~~~~~-------------~~ 150 (387)
T PRK07683 105 AFRTIL--------EPGTEVILPAPIYPGYEPIIRLC-GAKPV------------FIDTRSTGFR-------------LT 150 (387)
T ss_pred HHHHhC--------CCCCEEEEcCCCccchHHHHHHc-CCEEE------------EeecCcccCC-------------CC
Confidence 987653 23468999999998764333222 11110 01100 0000 01
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccccee-cccCCCCch
Q 010250 257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC-DKYSIKPDL 335 (514)
Q Consensus 257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~-~~~gv~pDi 335 (514)
.+++++.+. + ++.++++...++.+|.+. +++.+++|.++|+++|+++|+||+|..+...+..... ...+....+
T Consensus 151 ~~~l~~~~~---~-~~~~i~i~~p~NPtG~~~-s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~v 225 (387)
T PRK07683 151 AEALENAIT---E-KTRCVVLPYPSNPTGVTL-SKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKT 225 (387)
T ss_pred HHHHHHhcC---c-CceEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCe
Confidence 356666553 2 234444444455666544 5688999999999999999999999977332222111 111221222
Q ss_pred h---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--hccHHHHHHHHHHH
Q 010250 336 V---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKIAPK 410 (514)
Q Consensus 336 v---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~~~~~~~~~~~~~~ 410 (514)
+ +|||.++-.++++|++++++++++.+... ......+.+.+++.++.+.|+.-. -+...++++++.+.
T Consensus 226 i~~~s~SK~~~~pGlRiG~i~~~~~l~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 298 (387)
T PRK07683 226 IVINGLSKSHSMTGWRIGFLFAPSYLAKHILKV-------HQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDY 298 (387)
T ss_pred EEEeeccccccCccceeEEEEcCHHHHHHHHHH-------HHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 2 68999883338999999999998888631 111123345667777766664211 12345566777777
Q ss_pred HHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHH-HHHCCcEEEee-------CCEEEEeCC
Q 010250 411 FQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQ-CEKHGMLVRVS-------GDNIMMSPP 481 (514)
Q Consensus 411 l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~~~~~-------g~~iRi~p~ 481 (514)
+.+.|+++ .+ ....+. |.++++.+..... ....+... +.++||.+.++ .+.+||+
T Consensus 299 ~~~~l~~~---~~-~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~-- 362 (387)
T PRK07683 299 VYNRLISM---GL-DVEKPTGAFYLFPSIGHFTM----------SSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLS-- 362 (387)
T ss_pred HHHHHHHc---CC-cccCCCeeEEEEEecccCCC----------CHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEE--
Confidence 77777664 11 112233 4455555542110 02235544 56789999874 2579999
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q 010250 482 FIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 482 ~~~t~e~id~~~~~l~~~l~ 501 (514)
+..+++++.+++++|.+.+.
T Consensus 363 ~~~~~~~~~~al~~l~~~l~ 382 (387)
T PRK07683 363 YAYSIETLKEGLDRLEAFLQ 382 (387)
T ss_pred ecCCHHHHHHHHHHHHHHHH
Confidence 56789999999999998875
No 178
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.82 E-value=7.2e-18 Score=173.52 Aligned_cols=320 Identities=15% Similarity=0.131 Sum_probs=200.6
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT 177 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~ 177 (514)
.+..+||+..|. +++| .+|.+.+++.+. .....| +.....+|.+.|++++. ...++|++++|+++++..
T Consensus 50 ~~~~~i~l~~n~--~p~~-~~~~v~~a~~~~-~~~~~Y------p~~~~~~lr~~ia~~~~-~~~~~I~~t~Ga~~~i~~ 118 (380)
T PLN03026 50 KPEDIVKLDANE--NPYG-PPPEVLEALGNM-KFPYVY------PDPESRRLRAALAEDSG-LESENILVGCGADELIDL 118 (380)
T ss_pred CccceEEccCCC--CCCC-CCHHHHHHHHhh-HhhccC------CCCCHHHHHHHHHHHhC-cChhhEEEcCCHHHHHHH
Confidence 466889987764 4565 578888887542 211111 22235678889998874 456789999999999999
Q ss_pred HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
+++... ..+++|++.+++|..+....... |... ..++....|. .++
T Consensus 119 ~~~~~~--------~~gd~Vlv~~P~y~~y~~~~~~~-g~~~------------~~v~~~~~~~-------------~d~ 164 (380)
T PLN03026 119 LMRCVL--------DPGDKIIDCPPTFGMYVFDAAVN-GAEV------------IKVPRTPDFS-------------LDV 164 (380)
T ss_pred HHHHhc--------CCCCEEEEcCCChHHHHHHHHHc-CCEE------------EEeecCCCCC-------------cCH
Confidence 887653 23468999999996543222111 1111 0011111111 114
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh-
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV- 336 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv- 336 (514)
+++++.+.. +++.+|++...++.+|.+.+ .+++.++++.. +++|+||+|..|...+... ....-.+.++
T Consensus 165 ~~l~~~~~~---~~~~~v~l~~P~NPTG~~~~----~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~--~~~~~~~~viv 234 (380)
T PLN03026 165 PRIVEAVET---HKPKLLFLTSPNNPDGSIIS----DDDLLKILELP-ILVVLDEAYIEFSTQESRM--KWVKKYDNLIV 234 (380)
T ss_pred HHHHHHHhc---cCCcEEEEeCCCCCCCCCCC----HHHHHHHHhcC-CEEEEECcchhhcCCcchH--HHHHhCCCEEE
Confidence 666666532 23455565566777787776 66777777654 8999999998774332211 1111122332
Q ss_pred --chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Q 010250 337 --SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQD 413 (514)
Q Consensus 337 --~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~ 413 (514)
+|||.++-.++++|++++++++++.+.... ..++.+.+++.++.++|+..+ -++..+.+++.++++.+
T Consensus 235 ~~SfSK~~glaGlRiGy~~~~~~~i~~l~~~~---------~~~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~ 305 (380)
T PLN03026 235 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK---------QPYNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFG 305 (380)
T ss_pred EecchHhhcCccccceeeecCHHHHHHHHHhc---------CCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Confidence 689988733399999999999998886421 235567777888888874211 12346667777788888
Q ss_pred hhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-----CEEEEeCCCCCCHHH
Q 010250 414 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----DNIMMSPPFIMSPEE 488 (514)
Q Consensus 414 ~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-----~~iRi~p~~~~t~e~ 488 (514)
.|+++ +.+......|.++.+.+.+.. ....+.+.|.++||.++++. +.+||+ ..++++
T Consensus 306 ~L~~~---~~~~~~p~~~~f~~~~~~~~~-----------~~~~~~~~l~~~gI~v~~~~~~~~~~~lRis---~~~~~~ 368 (380)
T PLN03026 306 LLKEV---PFLEPYPSDANFILCRVTSGR-----------DAKKLKEDLAKMGVMVRHYNSKELKGYIRVS---VGKPEH 368 (380)
T ss_pred HHHHC---CCCeECCCCCeEEEEECCCCC-----------CHHHHHHHHHHCCeEEEECCCCCCCCEEEEe---cCCHHH
Confidence 88765 222222344667777664311 13457888999999998642 579999 347888
Q ss_pred HHHHHHHHHH
Q 010250 489 VDELISKYGK 498 (514)
Q Consensus 489 id~~~~~l~~ 498 (514)
++++++.|++
T Consensus 369 ~~~l~~al~~ 378 (380)
T PLN03026 369 TDALMEALKQ 378 (380)
T ss_pred HHHHHHHHHH
Confidence 8998888865
No 179
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.82 E-value=2.1e-17 Score=172.01 Aligned_cols=350 Identities=12% Similarity=0.063 Sum_probs=208.2
Q ss_pred cEEEeCCCCEEEEccCCccccc--CCCCCHHHHHHHHHHHhcC--CccccccccCCchHHHHHHHHHHhcC---------
Q 010250 92 SYVYDVNGKKYLDSLAGLWCTA--LGGSEPRLVAAATAQLNTL--PFYHSFWNRTTKPSLDLAKELLEMFT--------- 158 (514)
Q Consensus 92 ~~~~d~dG~~ylD~~s~~~~~~--lGh~~p~v~~A~~~~l~~~--~~~~~~~~~~~~~~~ela~~L~~~~~--------- 158 (514)
.++.+..|+.+|||..|..... +- .++.+.+++.+.+... ..|.. .....+|.+.|++++.
T Consensus 25 ~~~~~~~~~~~i~l~~g~p~~~~~~~-p~~~~~~a~~~~~~~~~~~~Y~~-----~~G~~~Lr~aia~~~~~~~~~~~~~ 98 (412)
T PTZ00433 25 NAKPSPSPKSIIKLSVGDPTLDGNLL-TPAIQTKALVEAVDSQECNGYPP-----TVGSPEAREAVATYWRNSFVHKESL 98 (412)
T ss_pred hhccCCCCCCeeecCCcCCCCcCCCC-CCHHHHHHHHHHhhcCCCCCCCC-----CCCcHHHHHHHHHHHHhhccccccc
Confidence 3455568899999998854211 22 4778999988877642 11211 1123445555555442
Q ss_pred --cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC
Q 010250 159 --ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC 236 (514)
Q Consensus 159 --~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 236 (514)
..+.+++++++|+++|+..+++... ..++.|++.+++|.+........+. .. ..++.
T Consensus 99 ~~~~~~~~i~it~G~~~al~~~~~~~~--------~~gd~vlv~~P~y~~~~~~~~~~g~-~~------------~~i~~ 157 (412)
T PTZ00433 99 KSTIKKDNVVLCSGVSHAILMALTALC--------DEGDNILVPAPGFPHYETVCKAYGI-EM------------RFYNC 157 (412)
T ss_pred cCCCChhhEEEeCChHHHHHHHHHHhc--------CCCCEEEEccCCcccHHHHHHHcCC-EE------------EEEec
Confidence 1346789999999999999998763 3356899999999876433222111 10 01111
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC
Q 010250 237 PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA 316 (514)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG 316 (514)
... +.+ ..+.+++++.+.. ++.+|++...++.+|.+. +.+.+++|.++|++||+++|+||++..
T Consensus 158 ~~~----------~~~-~~d~~~l~~~~~~----~~~~i~~~~p~NPtG~~~-s~~~~~~l~~~a~~~~~~ii~De~y~~ 221 (412)
T PTZ00433 158 RPE----------KDW-EADLDEIRRLVDD----RTKALIMTNPSNPCGSNF-SRKHVEDIIRLCEELRLPLISDEIYAG 221 (412)
T ss_pred Ccc----------ccC-cCCHHHHHHHhcc----CceEEEEeCCCCCCCccc-CHHHHHHHHHHHHHcCCeEEEeccccc
Confidence 000 000 0114566665532 344444433455666544 567899999999999999999999987
Q ss_pred cccccccc-eecccCCCCchh---chhhhhcCCcccceeEEe------CHHHHHHhhhccCCCCcccccCCCCCcHHHHH
Q 010250 317 FGRLGTMF-GCDKYSIKPDLV---SFAKALSSAYMPIGAILV------SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA 386 (514)
Q Consensus 317 ~gr~G~~~-~~~~~gv~pDiv---~~sK~l~gG~~pig~v~~------~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~a 386 (514)
|-..+..+ ....+.-..+++ +|||.++..++++|++++ .+++++.+... ...+++.+++++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~--------~~~~~~~~~~~q~ 293 (412)
T PTZ00433 222 MVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRL--------GMLVCGPCSVVQA 293 (412)
T ss_pred cccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHH--------hhccCCCChHHHH
Confidence 74333221 111111111222 689988654499999997 24566666531 1123567788888
Q ss_pred HHHHHHHHH-h--hccHHHHHHHHHHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHH
Q 010250 387 VAIEALKIY-K--ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC 462 (514)
Q Consensus 387 aa~aal~~~-~--~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 462 (514)
++.++++.- + -++..+.++++.+.+.+.|++.. .+..+.. -|.++++.++...-.. ......+++.|
T Consensus 294 a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~---~~~~~~p~gg~f~~~~l~~~~~~~------~~~~~~~~~~l 364 (412)
T PTZ00433 294 ALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECI---GLSPTMPRGSMFLMSRLDLEKFRD------IKSDVEFYEKL 364 (412)
T ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcccCCCeeEEEEEEechhhcCC------CCCHHHHHHHH
Confidence 777777521 1 12345566666677777776531 1222223 3667777775321000 00134577787
Q ss_pred H-HCCcEEEeeC-----CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 463 E-KHGMLVRVSG-----DNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 463 ~-~~Gv~~~~~g-----~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+ ++||.+.++. +.+|++ +...++++++++++|.++++..
T Consensus 365 l~~~gV~v~pg~~f~~~~~iRis--~~~~~e~l~~al~~l~~~~~~~ 409 (412)
T PTZ00433 365 LEEENVQVLPGEIFHMPGFTRLT--ISRPVEVLREAVERIKAFCERH 409 (412)
T ss_pred HHhcCEEEeCccccCCCCeEEEE--ecCCHHHHHHHHHHHHHHHHHh
Confidence 7 5799998753 579999 5667899999999999988654
No 180
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.82 E-value=5.8e-18 Score=175.53 Aligned_cols=329 Identities=14% Similarity=0.110 Sum_probs=197.7
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccc-ccc---ccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYH-SFW---NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAN 175 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~-~~~---~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~ 175 (514)
..|||..+. |..++.+++++.+.+......+ ..+ ....+...++.+.++++++. ..+.+++++++++++
T Consensus 18 ~~yl~~~~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~-~~~~v~~~~~~t~~l 90 (397)
T TIGR01976 18 RVFFDNPAG------TQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNA-DPPEVVFGANATSLT 90 (397)
T ss_pred eEEecCCcc------CCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCC-CCCeEEEeCCHHHHH
Confidence 478886443 3468899999999886432110 000 11224457888999998853 334799999999998
Q ss_pred HHHHHHHHHHHhhcCCCCccEEEEEecCCccccee---eeecCCCccccCCCCCCCCcccccCCCC-cccCCCCCCChhH
Q 010250 176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI---AASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGETEEE 251 (514)
Q Consensus 176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~---~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 251 (514)
..++...... . ..+++||+.++.|++.... .....|.... .++.+. .+
T Consensus 91 ~~~~~~~~~~----~-~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~------------~~~~~~~~~----------- 142 (397)
T TIGR01976 91 FLLSRAISRR----W-GPGDEVIVTRLDHEANISPWLQAAERAGAKVK------------WARVDEATG----------- 142 (397)
T ss_pred HHHHHHHHhc----C-CCCCEEEEcCCchHhHHHHHHHHHHhcCCEEE------------EEeccccCC-----------
Confidence 8776654211 1 2346788877766553211 1111121111 111100 00
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCC
Q 010250 252 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI 331 (514)
Q Consensus 252 ~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv 331 (514)
..+.+++++.+. +++.+|+++.+++.+|.+.| +++|.++|++||+++|+||+|. +|.. . .+....
T Consensus 143 --~~~~~~l~~~i~----~~~~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~~~--~--~~~~~~ 207 (397)
T TIGR01976 143 --ELHPDDLASLLS----PRTRLVAVTAASNTLGSIVD----LAAITELVHAAGALVVVDAVHY-APHG--L--IDVQAT 207 (397)
T ss_pred --CcCHHHHHHhcC----CCceEEEEeCCCCCCCccCC----HHHHHHHHHHcCCEEEEehhhh-cccc--C--CCHHHc
Confidence 012466776664 35678888888888898877 9999999999999999999986 3311 1 122223
Q ss_pred CCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCC------CcccccCCCCCcHHHHHHHHHHHHHHhhc-----
Q 010250 332 KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTL------GSFSHGFTYSGHPVSCAVAIEALKIYKER----- 398 (514)
Q Consensus 332 ~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~------~~~~~~~t~~~~pl~~aaa~aal~~~~~~----- 398 (514)
.+|++ +++|.++ .++|++++++++++.+.+..... ..+. .+ ..+....++..++++.+.+.
T Consensus 208 ~~d~~~~s~~K~~g---~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-~g--t~~~~~~~~l~~al~~~~~~g~~~~ 281 (397)
T TIGR01976 208 GADFLTCSAYKFFG---PHMGILWGRPELLMNLPPYKLTFSYDTGPERFE-LG--TPQYELLAGVVAAVDYLAGLGESAN 281 (397)
T ss_pred CCCEEEEechhhcC---CceEEEEEcHHHHhhCCCccccCccCCCcchhc-CC--CCCHHHHHHHHHHHHHHHHhCcccc
Confidence 46776 4569873 57899999999888776421100 0011 01 23344455555666665432
Q ss_pred ------------cHHHHHHHHHHHHHhhhhhccCCCceeE--EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH
Q 010250 399 ------------NIVEQVNKIAPKFQDGVKAFSDSPIIGE--IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK 464 (514)
Q Consensus 399 ------------~~~~~~~~~~~~l~~~L~~l~~~~~~~~--v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 464 (514)
...++..++.++++++|+++....+... ....+.++.+.+.... ...+.++|.+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~l~~~L~~ 349 (397)
T TIGR01976 282 GSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHGLP------------PQRVVRRLAD 349 (397)
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCCcC------------HHHHHHHHHH
Confidence 1245556677777777766521212111 1113445555443211 3457788999
Q ss_pred CCcEEEee----------------CCEEEEeCCCCCCHHHHHHHHHHH
Q 010250 465 HGMLVRVS----------------GDNIMMSPPFIMSPEEVDELISKY 496 (514)
Q Consensus 465 ~Gv~~~~~----------------g~~iRi~p~~~~t~e~id~~~~~l 496 (514)
+||.++.+ ++.||+++...+|++||+++++.|
T Consensus 350 ~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 350 QGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred CCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 99999853 246999999999999999998864
No 181
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=1.8e-17 Score=168.91 Aligned_cols=317 Identities=14% Similarity=0.136 Sum_probs=198.6
Q ss_pred EEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHH
Q 010250 102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKL 181 (514)
Q Consensus 102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~ 181 (514)
.+|+..|. +.++ .+|.+++++.+.+...... ..+.....++.+.++++++ ...++|++++++++++..+++.
T Consensus 24 ~~~l~~~~--~~~~-~p~~~~~a~~~~~~~~~~~----~y~~~~~~~lr~~ia~~~~-~~~~~i~it~G~~~~l~~~~~~ 95 (351)
T PRK14807 24 KYKMDANE--TPFE-LPEEVIKNIQEIVKSSQVN----IYPDPTAEKLREELARYCS-VVPTNIFVGNGSDEIIHLIMLA 95 (351)
T ss_pred eeEccCCC--CCCC-CCHHHHHHHHHHhhcCccc----CCCCccHHHHHHHHHHHhC-CCcccEEEecCHHHHHHHHHHH
Confidence 36666553 3444 5789999998877532111 1122334678888988873 3457899999999999988876
Q ss_pred HHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHH
Q 010250 182 VWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLE 261 (514)
Q Consensus 182 a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le 261 (514)
.. ..+++|++.+++|.+....... .|.... .++..+.|+ .+.++++
T Consensus 96 l~--------~~gd~Vlv~~p~y~~~~~~~~~-~g~~~~------------~v~~~~~~~-------------~d~~~l~ 141 (351)
T PRK14807 96 FI--------NKGDVVIYPHPSFAMYSVYSKI-AGAVEI------------PVKLKEDYT-------------YDVGSFI 141 (351)
T ss_pred hc--------CCCCEEEEeCCChHHHHHHHHH-cCCeEE------------EeecCCCCC-------------CCHHHHH
Confidence 53 3357899999999865432222 121110 111111111 1146677
Q ss_pred HHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh---ch
Q 010250 262 DLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV---SF 338 (514)
Q Consensus 262 ~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv---~~ 338 (514)
+.+.. .++.++++...++.+|.+.+ .+++.++|++++.++|+||+|.+|. +.... ....-.+.++ +|
T Consensus 142 ~~~~~---~~~k~v~l~~p~NPtG~~~~----~~~l~~l~~~~~~~~ivDe~y~~~~--~~~~~-~~~~~~~~vi~~~S~ 211 (351)
T PRK14807 142 KVIEK---YQPKLVFLCNPNNPTGSVIE----REDIIKIIEKSRGIVVVDEAYFEFY--GNTIV-DVINEFENLIVLRTL 211 (351)
T ss_pred HHhhc---cCCCEEEEeCCCCCCCCCCC----HHHHHHHHHhCCCEEEEeCcchhhc--ccchH-HHhhhCCCEEEEecc
Confidence 66642 24455555556777787776 6888889999889999999998762 32111 1111112333 68
Q ss_pred hhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhh
Q 010250 339 AKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA 417 (514)
Q Consensus 339 sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 417 (514)
||.++ .| +++|++++++++++.+.... ..+..+++++.++.+.|+.-.-++..+.++++.+.+.+.|++
T Consensus 212 SK~~~~~G-lRiG~~v~~~~~~~~~~~~~---------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~ 281 (351)
T PRK14807 212 SKAFGLAG-LRVGYAVANENILKYLNLVK---------SPYNINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSK 281 (351)
T ss_pred hHhcccch-hceeeeecCHHHHHHHHHcc---------CCCCcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99887 45 89999999999999886421 124456777777777775321123345566666777777765
Q ss_pred ccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC------CEEEEeCCCCCCHHHHHH
Q 010250 418 FSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG------DNIMMSPPFIMSPEEVDE 491 (514)
Q Consensus 418 l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g------~~iRi~p~~~~t~e~id~ 491 (514)
+.. +......|.++++.+.+ ...+.+.|.++||.+.+.+ +.+||+ ..+.++.++
T Consensus 282 ~~g---~~~~~~~~~~~~i~~~~--------------~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis---~~~~~~~~~ 341 (351)
T PRK14807 282 IPG---IKVYPSKTNFILVKFKD--------------ADYVYQGLLERGILVRDFSKVEGLEGALRIT---VSSCEANDY 341 (351)
T ss_pred CCC---cEECcCCccEEEEEcCC--------------HHHHHHHHHHCCEEEEECCCCCCCCCeEEEE---cCCHHHHHH
Confidence 422 22233456677776642 3457788999999997642 469999 346788888
Q ss_pred HHHHHHHHH
Q 010250 492 LISKYGKAL 500 (514)
Q Consensus 492 ~~~~l~~~l 500 (514)
+++.|++++
T Consensus 342 l~~~l~~~~ 350 (351)
T PRK14807 342 LINGLKELL 350 (351)
T ss_pred HHHHHHHhh
Confidence 888887653
No 182
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.81 E-value=1.2e-17 Score=172.30 Aligned_cols=337 Identities=12% Similarity=0.095 Sum_probs=198.1
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc-cccccccCCchHHHHHHHHHHhcCc-CCCC-eEEEeCChhHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFTA-SKMA-KVFFTNSGSEA 174 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~-~~~~~~~~~~~~~ela~~L~~~~~~-~~~~-~v~~~~sGseA 174 (514)
.|..++||.+|. ..++ .++.+.+++.+.+..... .++...+..+....+++.+.+.++. ...+ .++++++++++
T Consensus 27 ~~~~~~~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~ 103 (383)
T TIGR03540 27 EGVDVISLGIGD--PDLP-TPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEG 103 (383)
T ss_pred cCCCeEEeCCCC--CCCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHH
Confidence 366788988774 2345 377899999887754211 1111111223334444444433221 1234 68899999999
Q ss_pred HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250 175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254 (514)
Q Consensus 175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
+..+++... ..++.|++.+++|.+........+.. . ..++.... ..+ .
T Consensus 104 l~~~~~~~~--------~~gd~vlv~~P~y~~~~~~~~~~G~~-v------------~~v~~~~~----------~g~-~ 151 (383)
T TIGR03540 104 IAHIPLAFV--------NPGDIVLVPDPGYPVYRIGTLFAGGE-P------------YEMPLKEE----------NGF-L 151 (383)
T ss_pred HHHHHHHhC--------CCCCEEEEeCCCCcchHHHHHhcCCE-E------------EEEecCcc----------cCC-c
Confidence 999988653 34568999999998865433322221 1 00111000 000 0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-ee-cccCCC
Q 010250 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GC-DKYSIK 332 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~-~~~gv~ 332 (514)
.+++++++.+. +++.+|++...++.+|.+ .+.+.+++|.++|++||+++|+||+|..+...+... .. ...+..
T Consensus 152 ~d~~~l~~~~~----~~~~~v~i~~P~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~ 226 (383)
T TIGR03540 152 PDFDAIPEDIA----KKAKLMFINYPNNPTGAV-APLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAK 226 (383)
T ss_pred cCHHHHHhhcc----ccceEEEEeCCCCCcCcc-CCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcc
Confidence 11355655543 234455555335667755 467889999999999999999999998664333211 11 111111
Q ss_pred ---CchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHH
Q 010250 333 ---PDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKI 407 (514)
Q Consensus 333 ---pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~ 407 (514)
..+-+|||.++-.++++|++++++++++.+... ......+.+.+.+.++.++|+...+ +++.+.++++
T Consensus 227 ~~~i~~~SfSK~~g~~GlRiG~~i~~~~l~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 299 (383)
T TIGR03540 227 DVGIEFHSLSKTYNMTGWRIGMAVGNADLIAGLGKV-------KTNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRR 299 (383)
T ss_pred cCEEEEEecccccCCccceeeEEeCCHHHHHHHHHH-------HHhcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 223479998864338999999999998887642 1112233445566666666643211 2345667777
Q ss_pred HHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEEE
Q 010250 408 APKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMM 478 (514)
Q Consensus 408 ~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iRi 478 (514)
.+.+.+.|++. .+ ..... .|.++++.+.+.. ....+...|+ ++||.+.++ .+.+||
T Consensus 300 ~~~~~~~L~~~---~~-~~~~~~~~~~~~~~l~~~~-----------~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ri 364 (383)
T TIGR03540 300 RDLLLEALKKI---GI-DVEKPKATFYVWVPVPEGY-----------TSAEFAARLLEETGVVVTPGVGFGEYGEGYIRI 364 (383)
T ss_pred HHHHHHHHHhC---CC-EecCCCcceEEEEECCCCC-----------CHHHHHHHHHHHCCEEEecchhhCccCCCeEEE
Confidence 77788877765 22 11222 3556777765321 1345777765 689999864 246999
Q ss_pred eCCCCCCHHHHHHHHHHHHH
Q 010250 479 SPPFIMSPEEVDELISKYGK 498 (514)
Q Consensus 479 ~p~~~~t~e~id~~~~~l~~ 498 (514)
+ +..+++++.+++++|.+
T Consensus 365 s--~~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 365 S--LTVPDERLEEAVARIKK 382 (383)
T ss_pred E--ecCCHHHHHHHHHHHhh
Confidence 9 56788888888887753
No 183
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.81 E-value=1.9e-17 Score=171.78 Aligned_cols=351 Identities=13% Similarity=0.078 Sum_probs=208.0
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-CCCCeEEEeCChhHHHHH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKMAKVFFTNSGSEANDT 177 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~~v~~~~sGseA~~~ 177 (514)
|...+|+..|.. .++ .+|.+.+++.+.+++....+....+..+....+++.+.+.++. ...+++++++++++|+..
T Consensus 32 ~~~~i~l~~g~p--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~ 108 (402)
T PRK06107 32 GRSIVDLTVGEP--DFD-TPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFL 108 (402)
T ss_pred cCCEEEcCCCCC--CCC-CCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHH
Confidence 556788877753 233 3788999999888643221121123445556667777665432 245789999999999999
Q ss_pred HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
+++... ..++.|++.+++|.++........+... .++++... .+ ..+.
T Consensus 109 ~~~~~~--------~~gd~vl~~~p~y~~y~~~~~~~~~~~~-------------~v~~~~~~----------~~-~~~~ 156 (402)
T PRK06107 109 ALMATL--------EAGDEVIIPAPYWVSYPDMVLANDGTPV-------------IVACPEEQ----------GF-KLTP 156 (402)
T ss_pred HHHHhc--------CCCCEEEEecCCCcCHHHHHHHcCCEEE-------------EecCCccc----------CC-CCCH
Confidence 987542 3356788989988766322221111110 11111000 00 0113
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc-CCEEEEechhcCcccccccce-e-cc-cCCCC
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY-DILFIADEVICAFGRLGTMFG-C-DK-YSIKP 333 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~-gillI~DEv~tG~gr~G~~~~-~-~~-~gv~p 333 (514)
+++++.+. ++..+.+++.| ++.+|. ..+.+.+++|.++|++| |+++|+||+|..+...+..+. . .. .+...
T Consensus 157 ~~l~~~~~---~~~~~v~l~~p-~NPtG~-~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~ 231 (402)
T PRK06107 157 EALEAAIT---PRTRWLILNAP-SNPTGA-VYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRD 231 (402)
T ss_pred HHHHhhcC---cCceEEEEECC-CCCCCc-CcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccC
Confidence 56666553 23345555556 455564 44668899999999998 999999999986644332211 1 11 11222
Q ss_pred chh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--hccHHHHHHHHH
Q 010250 334 DLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKIA 408 (514)
Q Consensus 334 Div---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~~~~~~~~~~~~ 408 (514)
.++ +|||.++..++++|++++++++++.+... ....+++.+.+++.++..+|+.-. -++..+.++++.
T Consensus 232 ~vi~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~-------~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 304 (402)
T PRK06107 232 RVLVTNGVSKTYAMTGWRIGYAAGPADLIAAINKL-------QSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRR 304 (402)
T ss_pred CEEEEeccchhhcCcccceeeeecCHHHHHHHHHH-------HHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHH
Confidence 343 57899873338999999999999888742 222345667788888877774111 023345566667
Q ss_pred HHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCcc--chHHHHHHH-HHHCCcEEEeeC-----CEEEEe
Q 010250 409 PKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEW--GIGAYFGAQ-CEKHGMLVRVSG-----DNIMMS 479 (514)
Q Consensus 409 ~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~-l~~~Gv~~~~~g-----~~iRi~ 479 (514)
+.+.+.|+++.. +..... -|.++++.+....... .+..+ .....+... +.++||.+.++. +++||+
T Consensus 305 ~~~~~~L~~~~g---~~~~~p~gg~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis 379 (402)
T PRK06107 305 DYALALLNAIPG---LSCLVPDGAFYLYVNCAGLIGKT--TPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLS 379 (402)
T ss_pred HHHHHHHhcCCC---CcccCCCcceEEeeecccccccc--cccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEE
Confidence 777777765422 222222 3555666663210000 00000 012335544 457899998762 579999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 480 PPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 480 p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+..++|++++++++|.+.++++
T Consensus 380 --~~~~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 380 --IATSLETLEEACARIERAVAAL 401 (402)
T ss_pred --eCCCHHHHHHHHHHHHHHHHhc
Confidence 6678999999999999988764
No 184
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.81 E-value=1.4e-17 Score=172.44 Aligned_cols=337 Identities=12% Similarity=0.100 Sum_probs=194.5
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhcC-cCCCC-eEEEeCChhHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEA 174 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~-~v~~~~sGseA 174 (514)
.|+.++||..+ ++.+..++++.+++.+.+.... ..+....+..+....+++.+...++ ....+ .+++++|+++|
T Consensus 33 ~g~~~i~l~~g---~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~a 109 (394)
T PRK05942 33 QGLDLIDLGMG---NPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEG 109 (394)
T ss_pred cCCCeEEcCCC---CCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHH
Confidence 36668999876 4444456678888877775321 1111111122333444444443322 12345 58899999999
Q ss_pred HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250 175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254 (514)
Q Consensus 175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
+..++.... ..+++|++.+++|.+........ |... ..++.... +.+ .
T Consensus 110 l~~~~~~~~--------~~gd~Vlv~~P~y~~~~~~~~~~-g~~~------------~~v~~~~~----------~~~-~ 157 (394)
T PRK05942 110 LTHLALAYV--------NPGDVVLVPSPAYPAHFRGPLIA-GAQI------------YPIILKPE----------NDW-L 157 (394)
T ss_pred HHHHHHHhC--------CCCCEEEEcCCCCcchHHHHHHc-CCEE------------EEeecCCc----------cCC-c
Confidence 999887653 34578999999998764322221 1111 00111000 000 0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-cee-cc---c
Q 010250 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGC-DK---Y 329 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~-~~---~ 329 (514)
.+.+++++.+. +++.++++...++.+|.+ .+++.+++|.++|++||+++|+||+|..|...+.. ... .. .
T Consensus 158 ~d~~~l~~~~~----~~~k~i~l~~P~NPtG~~-~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~ 232 (394)
T PRK05942 158 IDLSSIPEEVA----QQAKILYFNYPSNPTTAT-APREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAK 232 (394)
T ss_pred cCHHHHHHhcc----ccceEEEEcCCCCCCCCc-CCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCcc
Confidence 12456665553 244555555335666655 46788999999999999999999999866433321 111 11 1
Q ss_pred CCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHH
Q 010250 330 SIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKI 407 (514)
Q Consensus 330 gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~ 407 (514)
+....+-+|||.++.+++++|++++++++++.+... .....++.+.+++.++.++|+..++ ++..++++++
T Consensus 233 ~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~l~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 305 (394)
T PRK05942 233 DIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGLRTL-------KTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTR 305 (394)
T ss_pred ccEEEEecchhccCChhhheeeeecCHHHHHHHHHH-------HhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 111223478998864348999999999999888742 1112344555666667777753221 2456667777
Q ss_pred HHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHH-HHHHCCcEEEee-------CCEEEE
Q 010250 408 APKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGA-QCEKHGMLVRVS-------GDNIMM 478 (514)
Q Consensus 408 ~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~Gv~~~~~-------g~~iRi 478 (514)
.+.+.+.|+++ ... ...+ -|.++++.+..... ...+.. .+.++||.+.++ .++||+
T Consensus 306 ~~~~~~~L~~~-~~~---~~~~~~~~f~~~~~~~~~~-----------~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRi 370 (394)
T PRK05942 306 RDFLIQGLGEL-GWN---IPPTKATMYLWVPCPVGMG-----------STDFALNVLQKTGVVVTPGNAFGEGGEGYVRI 370 (394)
T ss_pred HHHHHHHHHHC-CCe---ecCCCeeeEEEEECCCCCC-----------HHHHHHHHHHHCCEEEeCChhhCcCCCCeEEE
Confidence 77888877764 211 1223 34567777653210 223444 455789999763 257999
Q ss_pred eCCCCCCHHHHHHHHHHHHH
Q 010250 479 SPPFIMSPEEVDELISKYGK 498 (514)
Q Consensus 479 ~p~~~~t~e~id~~~~~l~~ 498 (514)
+. ..+.+.+.+++++|.+
T Consensus 371 s~--~~~~~~l~~~l~~l~~ 388 (394)
T PRK05942 371 SL--IADCDRLGEALDRLKQ 388 (394)
T ss_pred Ee--cCCHHHHHHHHHHHHH
Confidence 95 3455666666666543
No 185
>PRK09105 putative aminotransferase; Provisional
Probab=99.81 E-value=7.3e-18 Score=172.82 Aligned_cols=318 Identities=15% Similarity=0.097 Sum_probs=196.9
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV 179 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al 179 (514)
+.++|+..|. ++++ .+|.+.+++.+.+.....| +.....+|.+.|++.++ ...++|++++|+++++..++
T Consensus 43 ~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~Y------~~~~~~~Lr~aia~~~~-v~~e~I~it~Gs~~ai~~~~ 112 (370)
T PRK09105 43 EGAVFLNANE--CPLG-PSPAARDAAARSAALSGRY------DLELEDDLRTLFAAQEG-LPADHVMAYAGSSEPLNYAV 112 (370)
T ss_pred CCcEEecCCC--CCCC-CCHHHHHHHHHHHHHhcCC------CCchHHHHHHHHHHHhC-cChhhEEEcCChHHHHHHHH
Confidence 4455655552 3455 5889999998877543222 11225678888888874 46789999999999999998
Q ss_pred HHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250 180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259 (514)
Q Consensus 180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (514)
.... ..+++|++.+++|.+....+... |... ..++....|. .+.++
T Consensus 113 ~~l~--------~~gd~Vli~~P~y~~~~~~~~~~-g~~~------------~~v~~~~~~~-------------~d~~~ 158 (370)
T PRK09105 113 LAFT--------SPTAGLVTADPTYEAGWRAADAQ-GAPV------------AKVPLRADGA-------------HDVKA 158 (370)
T ss_pred HHHc--------CCCCEEEEeCCChHHHHHHHHHc-CCeE------------EEecCCCCCC-------------CCHHH
Confidence 7663 33568999999998764332222 1111 0111111010 01244
Q ss_pred HHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh---
Q 010250 260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--- 336 (514)
Q Consensus 260 le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--- 336 (514)
+++. .++....+++.| ++.+|.+. +.+.++++.+.|+ +|+++|+||+|..|+.. ....+..+..++++
T Consensus 159 l~~~----~~~~~~v~l~nP-~NPTG~~~-~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~~--~s~~~~~~~~~~vi~~~ 229 (370)
T PRK09105 159 MLAA----DPNAGLIYICNP-NNPTGTVT-PRADIEWLLANKP-AGSVLLVDEAYIHFSDA--PSVVDLVAQRKDLIVLR 229 (370)
T ss_pred HHhc----CCCCCEEEEeCC-CCCCCcCc-CHHHHHHHHHhCC-CCcEEEEECchHHhccC--cchHHHHhhCCCEEEEe
Confidence 4332 223344556666 55666654 5567777777654 59999999999766431 11112222234544
Q ss_pred chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhhh
Q 010250 337 SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDGV 415 (514)
Q Consensus 337 ~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~L 415 (514)
+|||.++..++++|++++++++++.+... ..+..+..++.++.++|+.-+ -+...++++++.+++.+.|
T Consensus 230 SfSK~~g~~GlRiG~~v~~~~~i~~l~~~----------~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L 299 (370)
T PRK09105 230 TFSKLYGMAGMRLGLAAARPDLLAKLARF----------GHNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWL 299 (370)
T ss_pred cccHhhcCCccceeeeecCHHHHHHHHhc----------CCCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 68998875449999999999999888631 233456666777777775211 1234566777777788877
Q ss_pred hhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe----eCCEEEEeCCCCCCHHHHHH
Q 010250 416 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV----SGDNIMMSPPFIMSPEEVDE 491 (514)
Q Consensus 416 ~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~----~g~~iRi~p~~~~t~e~id~ 491 (514)
+++ +..+ ....|.++.+.+.. ....+.+.|.++||.+.. ..+++|++ ..+++++++
T Consensus 300 ~~~-g~~~---~~~~~~f~~~~~~~-------------~~~~l~~~L~~~gI~v~~~~~~~~~~~Ris---~~~~~~~~~ 359 (370)
T PRK09105 300 KKK-GYKC---TPSQANCFMVDVKR-------------PAKAVADAMAKQGVFIGRSWPIWPNWVRVT---VGSEEEMAA 359 (370)
T ss_pred HHC-CCCc---CCCCCcEEEEeCCC-------------CHHHHHHHHHHCCcEEecCCCCCCCeEEEE---cCCHHHHHH
Confidence 765 2221 23445555555421 134588899999999842 13579999 347888999
Q ss_pred HHHHHHHHH
Q 010250 492 LISKYGKAL 500 (514)
Q Consensus 492 ~~~~l~~~l 500 (514)
+++.|++.+
T Consensus 360 l~~al~~~~ 368 (370)
T PRK09105 360 FRSAFAKVM 368 (370)
T ss_pred HHHHHHHHh
Confidence 998887764
No 186
>PRK07337 aminotransferase; Validated
Probab=99.81 E-value=1.7e-17 Score=171.47 Aligned_cols=341 Identities=13% Similarity=0.120 Sum_probs=201.4
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHHH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDT 177 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~~ 177 (514)
|..++||..+.. .++ .+|.+.+++.+.+......+....+..+....+++.+...++ ....+++++++++++|+..
T Consensus 29 ~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~ 105 (388)
T PRK07337 29 GRDIIHMGIGEP--DFT-APEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLL 105 (388)
T ss_pred CCCEEEeCCcCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHH
Confidence 345677766632 233 368899999887754211111111122333344444433322 1345789999999999988
Q ss_pred HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCChhHHHHH
Q 010250 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEYSTR 255 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 255 (514)
++.... ..++.|++.+++|.+........+.... .++.. ..|. .
T Consensus 106 ~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~g~~~~-------------~~~~~~~~~~~-------------~ 151 (388)
T PRK07337 106 ACLALV--------ERGDEVLMPDPSYPCNRHFVAAAEGRPV-------------LVPSGPAERFQ-------------L 151 (388)
T ss_pred HHHHhc--------CCCCEEEEeCCCchhhHHHHHHcCCEEE-------------EeecCCccCCc-------------C
Confidence 887653 3357899999999876322222111110 01110 0011 1
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCch
Q 010250 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL 335 (514)
Q Consensus 256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDi 335 (514)
+.+++++.+. ++..+.++..|. +.+|.+. +.+.+++|.++|++||+++|+||++.+|...+.... .....+++
T Consensus 152 ~~~~l~~~~~---~~~~~v~l~~p~-NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~--~~~~~~~v 224 (388)
T PRK07337 152 TAADVEAAWG---ERTRGVLLASPS-NPTGTSI-APDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVS--ALSLGDDV 224 (388)
T ss_pred CHHHHHhhcC---ccceEEEEECCC-CCCCcCc-CHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcC--hhhccCCE
Confidence 1456666553 344555666664 5556544 567899999999999999999999988755443111 11233455
Q ss_pred h---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH--Hh-hccHHHHHHHHHH
Q 010250 336 V---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI--YK-ERNIVEQVNKIAP 409 (514)
Q Consensus 336 v---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~--~~-~~~~~~~~~~~~~ 409 (514)
+ +|||.++..++++|++++++++++.+... ......+.+.+++.++.++++. +. -++..+.++++.+
T Consensus 225 i~~~S~SK~~~~~G~RiG~~~~~~~l~~~l~~~-------~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~ 297 (388)
T PRK07337 225 ITINSFSKYFNMTGWRLGWLVVPEALVGTFEKL-------AQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRD 297 (388)
T ss_pred EEEEechhhcCCchhheeeeecCHHHHHHHHHH-------HHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHH
Confidence 4 67998864338999999999998887631 1112334566777776666641 11 1234556667777
Q ss_pred HHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHH-HHHCCcEEEee--------CCEEEEeC
Q 010250 410 KFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQ-CEKHGMLVRVS--------GDNIMMSP 480 (514)
Q Consensus 410 ~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~~~~~--------g~~iRi~p 480 (514)
.+.+.|+++ ..... ....-|.++++++.....+. .. ....++.. +.++||.+.++ .+.+|++
T Consensus 298 ~~~~~L~~~-~~~~~-~~p~~g~f~~~~~~~~~~~~-----~~-~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~- 368 (388)
T PRK07337 298 FIVPALESL-GFKVP-VMPDGAFYVYADCRGVAHPA-----AG-DSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLS- 368 (388)
T ss_pred HHHHHHHhc-CCccc-cCCCeeEEEEEecccccCCC-----CC-CHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEE-
Confidence 777777764 21111 11234778888886421000 00 13446655 45789999753 2479999
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q 010250 481 PFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 481 ~~~~t~e~id~~~~~l~~~l 500 (514)
+..+++++.+++++|.+++
T Consensus 369 -~~~~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 369 -YATSMSRLEEAVARLGKLF 387 (388)
T ss_pred -ecCCHHHHHHHHHHHHHHh
Confidence 5568999999999998764
No 187
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.81 E-value=8.3e-18 Score=172.28 Aligned_cols=321 Identities=14% Similarity=0.055 Sum_probs=194.9
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC--cCCCCeEEEeCChhHHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT--ASKMAKVFFTNSGSEAN 175 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~--~~~~~~v~~~~sGseA~ 175 (514)
++..++||..+. +....+|.+.+++.+..+.. .|. ...+..+....+++.+.+..+ +...+++++++++++++
T Consensus 25 ~~~~~i~l~~~~---p~~~~~~~~~~~~~~~~~~~-~Y~-~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i 99 (364)
T PRK07865 25 HPDGIVDLSVGT---PVDPVPPVIQEALAAAADAP-GYP-TTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELV 99 (364)
T ss_pred cCCCEEEcCCCC---CCCCCCHHHHHHHHHHHhhC-CCC-CccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHH
Confidence 445678988773 33444688888887655432 221 112233444556666655433 14467999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250 176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255 (514)
Q Consensus 176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (514)
..++.+.. . ..++.|++.+++|.+........ |.... .++.
T Consensus 100 ~~~~~~l~------~-~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~--------------~~~~----------------- 140 (364)
T PRK07865 100 AWLPTLLG------L-GPGDVVVIPELAYPTYEVGARLA-GATVV--------------RADS----------------- 140 (364)
T ss_pred HHHHHHHc------C-CCCCEEEECCCCcccHHHHHHhc-CCEEE--------------ecCC-----------------
Confidence 88766541 1 23468999999997753222211 11110 0000
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-ecc--cCCC
Q 010250 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDK--YSIK 332 (514)
Q Consensus 256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~--~gv~ 332 (514)
.++++. .++.+|+++..++++|.+. +.+.+++|.++|++||+++|.||+|..+...+.... ... .+..
T Consensus 141 -~~~l~~-------~~~~~v~~~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 211 (364)
T PRK07865 141 -LTELGP-------QRPALIWLNSPSNPTGRVL-GVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGD 211 (364)
T ss_pred -hhhCCc-------ccceEEEEcCCCCCCCccC-CHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCc
Confidence 122211 3456666666677777665 457899999999999999999999997754443211 111 0111
Q ss_pred -Cchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHH
Q 010250 333 -PDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKI 407 (514)
Q Consensus 333 -pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~ 407 (514)
+.++ +|||.++..++++|++++++++++.+... ....+++.+++.+.++.++|+..+ .++..+.++++
T Consensus 212 ~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 284 (364)
T PRK07865 212 HTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAELLEV-------RKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARR 284 (364)
T ss_pred cceEEEEeechhccCCCceeeEEEecCHHHHHHHHHH-------HHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 1222 68998854338999999999998887631 111234556777777766664311 12345566677
Q ss_pred HHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------CCEEEEe
Q 010250 408 APKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------GDNIMMS 479 (514)
Q Consensus 408 ~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------g~~iRi~ 479 (514)
.+.+.+.|++. ++. ...+. |.++++.+..+ ...+.+.|.++||++.++ .+++||+
T Consensus 285 ~~~l~~~L~~~---g~~-~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~ 347 (364)
T PRK07865 285 RAVLRPALEAA---GFR-VDHSEAGLYLWATRGED-------------CWDTVAWLAERGILVAPGDFYGPAGAQHVRVA 347 (364)
T ss_pred HHHHHHHHHHc---CCc-ccCCCccEEEEEeCCCC-------------HHHHHHHHHHCCEEEeCccccCcCCCCEEEEE
Confidence 77777777664 211 11223 44555654211 234678889999999863 2469999
Q ss_pred CCCCCCHHHHHHHHHHHH
Q 010250 480 PPFIMSPEEVDELISKYG 497 (514)
Q Consensus 480 p~~~~t~e~id~~~~~l~ 497 (514)
+..+++++++++++|.
T Consensus 348 --~~~~~~~~~~~~~~l~ 363 (364)
T PRK07865 348 --LTATDERIAAAVERLA 363 (364)
T ss_pred --ecCCHHHHHHHHHHhh
Confidence 5568999999999875
No 188
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.81 E-value=1.5e-17 Score=171.68 Aligned_cols=336 Identities=11% Similarity=0.084 Sum_probs=194.9
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhcCc-CCCC-eEEEeCChhHHH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFTA-SKMA-KVFFTNSGSEAN 175 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~-~v~~~~sGseA~ 175 (514)
|..++|+..|.. .++ .+|.+.+++.+.+.... ..+....+..+....+++.+.+.++. ...+ .+++++|+++++
T Consensus 30 ~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i 106 (385)
T PRK09276 30 GVDVISLGIGDP--DLP-TPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGI 106 (385)
T ss_pred CCCEEEecCCCC--CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence 556788887732 243 46789999988875421 11111111223333444444433221 2334 588899999999
Q ss_pred HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250 176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255 (514)
Q Consensus 176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (514)
..+++... ..++.|++.+++|.+........+. ... .++.... +.+. .
T Consensus 107 ~~~~~~~~--------~~gd~Vl~~~P~y~~~~~~~~~~g~-~~~------------~v~~~~~----------~g~~-~ 154 (385)
T PRK09276 107 AHIPLAFV--------NPGDVVLVPDPGYPVYKIGTIFAGG-EPY------------FMPLKEE----------NGFL-P 154 (385)
T ss_pred HHHHHHhC--------CCCCEEEEcCCCCcChHHHHHHcCC-EEE------------EEecCCC----------CCCc-C
Confidence 99887663 3457899999999876433222211 110 0111000 0000 0
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-e-ecccC---
Q 010250 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-G-CDKYS--- 330 (514)
Q Consensus 256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~-~~~~g--- 330 (514)
+++++++.+. +++.+|++...++.+|.+. +.+.+++|.++|++||+++|+||+|..|...|... . ....+
T Consensus 155 d~~~l~~~~~----~~~~~v~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 229 (385)
T PRK09276 155 DLDAIPEDVA----KKAKLMFINYPNNPTGAVA-DLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKD 229 (385)
T ss_pred CHHHHHHhcc----ccceEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcC
Confidence 1345554443 2344555554456667654 67889999999999999999999998764333211 1 11111
Q ss_pred CCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHH
Q 010250 331 IKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIA 408 (514)
Q Consensus 331 v~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~ 408 (514)
....+-+|||.++..++++|++++++++++.+.... .....+.+++...++.++|+..++ ++..+.++++.
T Consensus 230 ~~i~~~S~SK~~g~~GlRiG~~i~~~~l~~~~~~~~-------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 302 (385)
T PRK09276 230 VGIEFHSLSKTYNMTGWRIGFAVGNADLIAGLGKVK-------SNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERR 302 (385)
T ss_pred CEEEEecchhhcCCcchhheeeeCCHHHHHHHHHHH-------hhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 112234799988643389999999999998886421 111223445566666666642111 23455667777
Q ss_pred HHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEEEe
Q 010250 409 PKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMMS 479 (514)
Q Consensus 409 ~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iRi~ 479 (514)
+.+.+.|+++ ...+ ... -|.++++.+.+.. ....+...|+ ++||.+.++ .+.+||+
T Consensus 303 ~~l~~~L~~~-~~~~---~~~~~~~~~~v~~~~~~-----------~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris 367 (385)
T PRK09276 303 DILVEGLRKL-GLEV---EPPKATFYVWAPVPKGY-----------TSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIA 367 (385)
T ss_pred HHHHHHHHhC-CCcc---cCCCcceEEEEECCCCC-----------CHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEE
Confidence 7777777765 2221 122 2455677765321 1345677776 579999875 2479999
Q ss_pred CCCCCCHHHHHHHHHHHHH
Q 010250 480 PPFIMSPEEVDELISKYGK 498 (514)
Q Consensus 480 p~~~~t~e~id~~~~~l~~ 498 (514)
+..+++++.+++++|.+
T Consensus 368 --~~~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 368 --LTVPDERIEEAVERIKK 384 (385)
T ss_pred --eCCCHHHHHHHHHHHhh
Confidence 55788888888888753
No 189
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=7.6e-18 Score=171.87 Aligned_cols=319 Identities=16% Similarity=0.209 Sum_probs=197.7
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhc-CCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNT-LPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT 177 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~-~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~ 177 (514)
++.+|||.+|. +.++ .+|.+.+++.+.+.. ...| +.....+|.+.+++++. .+.++|++++|+++|+..
T Consensus 23 ~~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~~y------~~~~~~~lr~aia~~~~-~~~~~I~it~G~~~al~~ 92 (353)
T PRK05387 23 LAKLIKLNTNE--NPYP-PSPKVLEAIRAALGDDLRLY------PDPNADALRQAIAAYYG-LDPEQVFVGNGSDEVLAH 92 (353)
T ss_pred ccceeeccCCC--CCCC-CCHHHHHHHHHHhhhhhhcC------CCCcHHHHHHHHHHHhC-CCHHHEEEcCCHHHHHHH
Confidence 35689998775 3455 378899999887754 2212 22233678888888874 456899999999999999
Q ss_pred HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
+++... ..++.|++.+++|......... .|... ..++....|.. ++
T Consensus 93 ~~~~l~--------~~gd~vlv~~P~y~~~~~~~~~-~g~~~------------~~v~~~~~~~~-------------d~ 138 (353)
T PRK05387 93 AFLAFF--------NHDRPLLFPDITYSFYPVYAGL-YGIPY------------EEIPLDDDFSI-------------DV 138 (353)
T ss_pred HHHHhc--------CCCCEEEEeCCCHHHHHHHHHH-cCCEE------------EEeecCCCCCC-------------CH
Confidence 998764 3457899999998654322111 11111 11111111110 12
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc-CCEEEEechhcCcccccccceecccCCCCc-h
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY-DILFIADEVICAFGRLGTMFGCDKYSIKPD-L 335 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~-gillI~DEv~tG~gr~G~~~~~~~~gv~pD-i 335 (514)
+++++ .....+++.| ++.+|.+.+ .+++.++++++ |+++|+||+|..|+. ... .......+. +
T Consensus 139 ~~l~~-------~~~~v~~~~P-~NPtG~~~~----~~~~~~l~~~~~~~~livDe~y~~~~~--~~~-~~~~~~~~~~i 203 (353)
T PRK05387 139 EDYLR-------PNGGIIFPNP-NAPTGIALP----LAEIERILAANPDSVVVIDEAYVDFGG--ESA-IPLIDRYPNLL 203 (353)
T ss_pred HHHHh-------cCCEEEEeCC-CCCCCCCCC----HHHHHHHHHhCCCcEEEEeCcccccCC--cch-HHHHhhCCCEE
Confidence 33331 1234566666 666676665 55666666654 999999999987742 111 111111222 2
Q ss_pred h--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHH
Q 010250 336 V--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQ 412 (514)
Q Consensus 336 v--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~ 412 (514)
+ +|||.++-.++++|++++++++++.+.... ....+++.+.+++.++.++++..+ -++..++++++.+.+.
T Consensus 204 ~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~ 277 (353)
T PRK05387 204 VVQTFSKSRSLAGLRVGFAIGHPELIEALNRVK------NSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLV 277 (353)
T ss_pred EEEehhHhhcchhhhceeeecCHHHHHHHHHhh------ccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 2 589988732289999999999998886421 111245667788887777775211 1245667777778888
Q ss_pred hhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-----CEEEEeCCCCCCHH
Q 010250 413 DGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----DNIMMSPPFIMSPE 487 (514)
Q Consensus 413 ~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-----~~iRi~p~~~~t~e 487 (514)
+.|+++ ++ ......|.++.+.+... ....+.+.|.++||.+...+ +.+||+. .+++
T Consensus 278 ~~L~~~---g~-~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~---~~~~ 338 (353)
T PRK05387 278 EELEAL---GF-EVLPSKANFVFARHPSH------------DAAELAAKLRERGIIVRHFNKPRIDQFLRITI---GTDE 338 (353)
T ss_pred HHHHHC---CC-eECCCcCcEEEEECCCC------------CHHHHHHHHHHCCEEEEECCCCCCCCeEEEEe---CCHH
Confidence 888765 22 11223355555554321 14567888999999997542 4699993 3789
Q ss_pred HHHHHHHHHHHHHH
Q 010250 488 EVDELISKYGKALK 501 (514)
Q Consensus 488 ~id~~~~~l~~~l~ 501 (514)
++++++++|++++.
T Consensus 339 ~~~~~~~~L~~~~~ 352 (353)
T PRK05387 339 EMEALVDALKEILA 352 (353)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999988764
No 190
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.81 E-value=2.4e-17 Score=171.07 Aligned_cols=341 Identities=13% Similarity=0.120 Sum_probs=204.1
Q ss_pred CCEEEEccCCcccc--cCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC----cCCCCeEEEeCChh
Q 010250 99 GKKYLDSLAGLWCT--ALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT----ASKMAKVFFTNSGS 172 (514)
Q Consensus 99 G~~ylD~~s~~~~~--~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~----~~~~~~v~~~~sGs 172 (514)
|+.++++..|.... .++ .++.+.+++.+.+...... . ..+.....++.+.+++++. ....++|++++|++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~-~~~~~~~~~~~~~~~~~~~--~-Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~ 105 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFGNLP-TDPEVMQAMKDSLDSGKYN--G-YAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCS 105 (401)
T ss_pred CCCeeecCCCCCCCcCCCC-CCHHHHHHHHHHHhccCCC--C-CCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChH
Confidence 56789988775421 233 4788999988877652110 0 1122233456666666553 13457899999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC--cccCCCCCCChh
Q 010250 173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH--YWRYAHPGETEE 250 (514)
Q Consensus 173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 250 (514)
+|+..++.... ..++.|++.+++|.......... |... ..++++. .|.
T Consensus 106 ~al~~~~~~l~--------~~gd~v~i~~P~y~~~~~~~~~~-g~~v------------~~~~~~~~~~~~--------- 155 (401)
T TIGR01264 106 HAIEMCIAALA--------NAGQNILVPRPGFPLYETLAESM-GIEV------------KLYNLLPDKSWE--------- 155 (401)
T ss_pred HHHHHHHHHhC--------CCCCEEEEeCCCChhHHHHHHHc-CCEE------------EEeecCCccCCC---------
Confidence 99999987663 23568999999997654222211 1110 0011100 000
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccC
Q 010250 251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS 330 (514)
Q Consensus 251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~g 330 (514)
.+++.+++.+.. ++.++++...++.+|.+. +.+.+++|.++|+++|+++|+||+|..|-..|..+. ....
T Consensus 156 ----~d~~~l~~~~~~----~~~~v~~~~p~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~-~~~~ 225 (401)
T TIGR01264 156 ----IDLKQLESLIDE----KTAALIVNNPSNPCGSVF-SRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFE-PLAS 225 (401)
T ss_pred ----CCHHHHHHHhcc----CceEEEEcCCCCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccc-cHHH
Confidence 114566665532 234444443455666544 568899999999999999999999998754443211 1111
Q ss_pred CCCc--hh---chhhhhcCCcccceeEEeCH------HHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--
Q 010250 331 IKPD--LV---SFAKALSSAYMPIGAILVSP------EVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-- 397 (514)
Q Consensus 331 v~pD--iv---~~sK~l~gG~~pig~v~~~~------~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-- 397 (514)
..++ ++ +|||.++..++++|++++++ ++++.+.. .....++.+++++.++.+.|+...+
T Consensus 226 ~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~a~~~~l~~~~~~~ 297 (401)
T TIGR01264 226 LSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVK--------LSQRILGPCTIVQGALPSILLRTPQEY 297 (401)
T ss_pred cCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHHHHH--------HhhccCCCCcHHHHHHHHHHHhCcHHH
Confidence 2222 32 68997555449999999864 34444432 1112345567777777777753111
Q ss_pred -ccHHHHHHHHHHHHHhhhhhccCCCcee-EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEeeC-
Q 010250 398 -RNIVEQVNKIAPKFQDGVKAFSDSPIIG-EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG- 473 (514)
Q Consensus 398 -~~~~~~~~~~~~~l~~~L~~l~~~~~~~-~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g- 473 (514)
++..+.++++.+.+.+.|+++ +.+. .....|.++++.+.....+. .. ....+...|+ ++||++.++.
T Consensus 298 l~~~~~~~~~~r~~l~~~L~~~---~~~~~~~p~~g~f~~~~~~~~~~~~-----~~-~~~~~~~~l~~~~gI~v~pg~~ 368 (401)
T TIGR01264 298 FDGTLSVLESNAMLCYGALAAV---PGLRPVMPSGAMYMMVGIEMEHFPE-----FK-NDVEFTERLVAEQSVFCLPGSC 368 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC---CCCcccCCCeeeEEEEEecccccCC-----CC-CHHHHHHHHHHhCCEEEeCchh
Confidence 234556667777777777765 2122 12345778888875421000 00 1344667765 7899998752
Q ss_pred ----CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 474 ----DNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 474 ----~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
+.+|++ +..+++++++++++|.+.+++
T Consensus 369 f~~~~~iRis--~~~~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 369 FEYPGFFRVV--LTVPVVMMEEACSRIQEFCER 399 (401)
T ss_pred cCCCCeEEEE--EcCCHHHHHHHHHHHHHHHhc
Confidence 579999 567789999999999988764
No 191
>PRK03321 putative aminotransferase; Provisional
Probab=99.81 E-value=4.2e-18 Score=173.69 Aligned_cols=320 Identities=16% Similarity=0.182 Sum_probs=199.7
Q ss_pred EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHH
Q 010250 101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVK 180 (514)
Q Consensus 101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk 180 (514)
.+||+..+. ..+| .+|.+.+++.+.+.....| +.....++.+.+++++. .+.++++++++.++++..++.
T Consensus 23 ~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~y------~~~g~~~lr~~ia~~~~-~~~~~I~~~~G~~~~l~~~~~ 92 (352)
T PRK03321 23 GAIKLSSNE--TPFG-PLPSVRAAIARAAAGVNRY------PDMGAVELRAALAEHLG-VPPEHVAVGCGSVALCQQLVQ 92 (352)
T ss_pred cceeccCCC--CCCC-CCHHHHHHHHHHHHhcCcC------CCCcHHHHHHHHHHHhC-cCHHHEEECCCHHHHHHHHHH
Confidence 378887764 3355 4678999998877643322 22345678888888874 345789999888888887776
Q ss_pred HHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHH
Q 010250 181 LVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 260 (514)
Q Consensus 181 ~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 260 (514)
... ..++.|++..++|....... ...|... ..++....+. .+++++
T Consensus 93 ~~~--------~~gd~Vli~~p~y~~~~~~~-~~~g~~~------------~~v~~~~~~~-------------~~~~~l 138 (352)
T PRK03321 93 ATA--------GPGDEVIFAWRSFEAYPILV-QVAGATP------------VQVPLTPDHT-------------HDLDAM 138 (352)
T ss_pred Hhc--------CCCCEEEeCCCCHHHHHHHH-HHcCCEE------------EEccCCCCCC-------------CCHHHH
Confidence 543 33467888878775432111 1111110 0111100000 114666
Q ss_pred HHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh--cCCEEEEechhcCccccccc-ceecccCCCCchh-
Q 010250 261 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK--YDILFIADEVICAFGRLGTM-FGCDKYSIKPDLV- 336 (514)
Q Consensus 261 e~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~--~gillI~DEv~tG~gr~G~~-~~~~~~gv~pDiv- 336 (514)
++.+. +++.+|++...++.+|.+.+ .+++.++|++ +|+++|+||+|.+|...+.. .........++++
T Consensus 139 ~~~~~----~~~~~v~l~~p~NPtG~~~~----~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~ 210 (352)
T PRK03321 139 AAAIT----DRTRLIFVCNPNNPTGTVVT----PAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVV 210 (352)
T ss_pred HHhhc----cCCCEEEEeCCCCCcCCCcC----HHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEE
Confidence 66653 23445555555677787776 5677777765 69999999999877544321 1122222234555
Q ss_pred --chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHh
Q 010250 337 --SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQD 413 (514)
Q Consensus 337 --~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~ 413 (514)
+|||.++..++++|++++++++++.+... ..+++.+++++.++.++|+..++ .+..+++.+..+.+.+
T Consensus 211 ~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~---------~~~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~ 281 (352)
T PRK03321 211 LRTFSKAYGLAGLRVGYAVGHPEVIAALRKV---------AVPFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRA 281 (352)
T ss_pred EecchHHhhhHHHhhhhhcCCHHHHHHHHHh---------cCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 68999873238999999999999988741 23567788888888888753221 1123333444455666
Q ss_pred hhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHHHHHHH
Q 010250 414 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDEL 492 (514)
Q Consensus 414 ~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e~id~~ 492 (514)
.|++. ++. .....|.++++.+... ...+.+.|.++||.+.+.+ +.|||+ ..+.++++++
T Consensus 282 ~L~~~---~~~-~~~~~g~~i~i~l~~~-------------~~~~~~~l~~~gI~v~~~~~~~iRi~---~~~~~~~~~~ 341 (352)
T PRK03321 282 ALRAA---GWT-VPPSQANFVWLPLGER-------------TADFAAAAAEAGVVVRPFAGEGVRVT---IGAPEENDAF 341 (352)
T ss_pred HHHHC---CCc-cCCCCCCEEEEeCCCC-------------HHHHHHHHHHCCEEEEccCCCcEEEe---eCCHHHHHHH
Confidence 66654 221 1223477777776321 3457888999999999865 469999 4799999999
Q ss_pred HHHHHHHHH
Q 010250 493 ISKYGKALK 501 (514)
Q Consensus 493 ~~~l~~~l~ 501 (514)
+++|+++++
T Consensus 342 ~~al~~~~~ 350 (352)
T PRK03321 342 LRAARAWRA 350 (352)
T ss_pred HHHHHHHhc
Confidence 999998764
No 192
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.81 E-value=3.1e-17 Score=173.89 Aligned_cols=342 Identities=15% Similarity=0.098 Sum_probs=197.4
Q ss_pred CHHHHHHHHHHHhcCC---ccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCC
Q 010250 118 EPRLVAAATAQLNTLP---FYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPN 193 (514)
Q Consensus 118 ~p~v~~A~~~~l~~~~---~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~ 193 (514)
+..+++++.+.++... ..++...+..+....+++++.+..+ ....++|++++++++|+..+++... . ..
T Consensus 90 P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~------~-~~ 162 (481)
T PTZ00377 90 PADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLI------G-DP 162 (481)
T ss_pred CHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhc------c-CC
Confidence 4567788776665422 1111112233333444444443221 1356799999999999999998763 0 13
Q ss_pred ccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCChhHHHHHHHHHHHHHHHHhCC--
Q 010250 194 KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEYSTRLANNLEDLILKEGP-- 269 (514)
Q Consensus 194 ~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~-- 269 (514)
++.|++.+++|.+........+..... +++. ..|. .++++|++.+.....
T Consensus 163 gD~Vlv~~P~y~~y~~~~~~~g~~~v~-------------v~~~~~~~~~-------------~d~~~l~~~l~~~~~~~ 216 (481)
T PTZ00377 163 SDGVMIPIPQYPLYSAAITLLGGKQVP-------------YYLDEEKGWS-------------LDQEELEEAYEQAVRNG 216 (481)
T ss_pred CCEEEECCCCchhHHHHHHHcCCEEEE-------------EEeccccCCC-------------CCHHHHHHHHHHHHhcC
Confidence 568999999998875443333222111 1110 0011 114777777753211
Q ss_pred CcE-EEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc-ccc-ee-c-ccCCCC------chh--
Q 010250 270 ETI-AAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG-TMF-GC-D-KYSIKP------DLV-- 336 (514)
Q Consensus 270 ~~~-aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G-~~~-~~-~-~~gv~p------Div-- 336 (514)
.++ +.+++.| +|.+|.+ .+.+.+++|.++|++||+++|+||+|..+...+ ..+ .. . ..++.+ .++
T Consensus 217 ~~~k~l~l~~P-~NPTG~~-~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~ 294 (481)
T PTZ00377 217 ITPRALVVINP-GNPTGQV-LTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSF 294 (481)
T ss_pred CCeeEEEEECC-CCCCCcC-CCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEE
Confidence 134 4566666 5556654 467889999999999999999999998764322 121 11 0 011222 233
Q ss_pred -chhhhhcC-CcccceeEEe---CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH-----------Hhh-cc
Q 010250 337 -SFAKALSS-AYMPIGAILV---SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI-----------YKE-RN 399 (514)
Q Consensus 337 -~~sK~l~g-G~~pig~v~~---~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~-----------~~~-~~ 399 (514)
+|||.+.+ .++++|++++ ++++++.+... ...+++.+++++.++.++|+. .++ ..
T Consensus 295 ~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~--------~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~ 366 (481)
T PTZ00377 295 HSTSKGIIGECGRRGGYFELTNIPPEVREQIYKL--------ASINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDA 366 (481)
T ss_pred ecCCcccccCCcCceEEEEEeCCCHHHHHHHHHH--------hheecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Confidence 58998642 2299999986 88998888641 112345677888888887742 111 12
Q ss_pred HHHHHHHHHHHHHhhhhhccCCCceeEEEeee-eeEEEEEccCCCCCCCCCC-ccchHHH-HHHHHHHCCcEEEeeC---
Q 010250 400 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTG-LILGTEFADNKSPNEPFPP-EWGIGAY-FGAQCEKHGMLVRVSG--- 473 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g-~~~~i~~~~~~~~~~~~~~-~~~~~~~-~~~~l~~~Gv~~~~~g--- 473 (514)
+.+.++++.+.+.+.|+++ +.+......| .++++++............ ....... +...+.++||.+.|+.
T Consensus 367 ~~~~~~~rr~~l~~~L~~~---~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~ 443 (481)
T PTZ00377 367 IFTSLKRRAELLTDELNKI---EGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFG 443 (481)
T ss_pred HHHHHHHHHHHHHHHHhcC---CCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccC
Confidence 2334566677777777654 3333344444 4555444311100000000 0000122 3455667899998642
Q ss_pred -----CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010250 474 -----DNIMMSPPFIMSPEEVDELISKYGKALKATEERV 507 (514)
Q Consensus 474 -----~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~ 507 (514)
+.+|++ +..+++++++++++|.+++++..+++
T Consensus 444 ~~~~~~~~Rls--~~~~~e~l~~~l~rl~~~~~~~~~~~ 480 (481)
T PTZ00377 444 QKPGTYHFRIT--ILPPEEQIEEMVKKIKEFHESFMKKY 480 (481)
T ss_pred CCCCCCEEEEE--ECCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 369999 56788999999999999998776653
No 193
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.81 E-value=1e-17 Score=169.22 Aligned_cols=303 Identities=13% Similarity=0.094 Sum_probs=195.0
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV 179 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al 179 (514)
..++|+.+|. +++|...+.+.+ ..+..+ +. ...+|.+.|++.+ +.++|++++|+.||+..++
T Consensus 20 ~~~i~l~~ne--~p~~~~~~~~~~---~~~~~y---------p~-~~~~Lr~~ia~~~---~~~~I~it~Gs~~al~~~~ 81 (330)
T PRK05664 20 ADWLDLSTGI--APWPWPVPAIPA---DAWARL---------PE-TDDGLEAAARAYY---GAPQLLPVAGSQAAIQALP 81 (330)
T ss_pred HHheeecCCc--CCCCCCCcccCH---HHHHhC---------CC-ChHHHHHHHHHHh---CCCCEEECcCHHHHHHHHH
Confidence 4679988876 677876444432 222222 11 1257888898887 3478999999999998775
Q ss_pred HHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250 180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259 (514)
Q Consensus 180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (514)
.+ ..+++|++.+++|.+....+...+.... .+| .++
T Consensus 82 ~~----------~~gd~v~v~~P~y~~~~~~~~~~g~~~~---------------~v~-------------------~~~ 117 (330)
T PRK05664 82 RL----------RAPGRVGVLSPCYAEHAHAWRRAGHQVR---------------ELD-------------------EAE 117 (330)
T ss_pred Hc----------cCCCEEEEcCCChHHHHHHHHHcCCeEE---------------Eec-------------------hhh
Confidence 31 2346899999999887543333222110 001 134
Q ss_pred HHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh---
Q 010250 260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--- 336 (514)
Q Consensus 260 le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--- 336 (514)
+++.+. +....+++.|. +.+|.+. +.+.+++|.++|+++|+++|+||++..+....... .+.-.+.++
T Consensus 118 ~~~~~~----~~~~v~l~nP~-NPTG~~~-s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~---~~~~~~~vi~~~ 188 (330)
T PRK05664 118 VEAALD----SLDVLVVVNPN-NPTGRRF-DPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLA---ACAHRPGLIVLR 188 (330)
T ss_pred Hhhhhc----CCCEEEEeCCc-CCCCCcc-CHHHHHHHHHHHHhcCCEEEEECCcccCCCccccc---ccccCCCEEEEe
Confidence 444442 22357888886 4556544 56779999999999999999999998663211111 111123333
Q ss_pred chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhhh
Q 010250 337 SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDGV 415 (514)
Q Consensus 337 ~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~L 415 (514)
+|||.++-.++++|++++++++++.+... ..++..+.++..++.++|+... .+...+.++++.+++.+.|
T Consensus 189 SfSK~~gl~GlRiG~~v~~~~l~~~~~~~---------~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L 259 (330)
T PRK05664 189 SFGKFFGLAGARLGFVLAEPALLRALAEL---------LGPWTVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALL 259 (330)
T ss_pred eccccccCCCcceEEEEeCHHHHHHHHHh---------cCCCCCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 68998873338999999999999888741 1244556777777877775322 2345677788888888888
Q ss_pred hhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--CEEEEeCCCCCCHHHHHHHH
Q 010250 416 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIMMSPPFIMSPEEVDELI 493 (514)
Q Consensus 416 ~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--~~iRi~p~~~~t~e~id~~~ 493 (514)
+++ .+ ....+.+.++.+.+.+ ...+.+.|.++||.++..+ +.|||+ +..++++.++++
T Consensus 260 ~~~---~~-~~~~~~~~f~~~~~~~--------------~~~~~~~l~~~gi~v~~f~~~~~iRis--~~~~~~~~~~l~ 319 (330)
T PRK05664 260 RRH---GL-TPAGGCALFQWVRTED--------------AAALHEFLARRGILTRLFEQPASLRFG--LPADEADWARLD 319 (330)
T ss_pred HHC---CC-cccCCcceEEEEecCC--------------HHHHHHHHHHCCeEEEECCCCCeEEEE--CCCCHHHHHHHH
Confidence 775 11 1112223455554321 3457889999999998643 579999 444788888888
Q ss_pred HHHHHHHHH
Q 010250 494 SKYGKALKA 502 (514)
Q Consensus 494 ~~l~~~l~~ 502 (514)
+.|++..++
T Consensus 320 ~al~~~~~~ 328 (330)
T PRK05664 320 QALLAYRKE 328 (330)
T ss_pred HHHHHHHhh
Confidence 888766543
No 194
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.80 E-value=1.8e-17 Score=171.97 Aligned_cols=338 Identities=17% Similarity=0.189 Sum_probs=196.2
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC-cccc----ccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHS----FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEA 174 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~----~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA 174 (514)
+.|||..+. +.-++.|++++.+.+.... ..+. +.....+...++.+.++++++ .+.+.++|++||+++
T Consensus 4 ~~yld~aa~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g-~~~~~v~~~~g~t~a 76 (402)
T TIGR02006 4 PIYLDYAAT------TPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIG-ADSREIVFTSGATES 76 (402)
T ss_pred cEEeeCCcC------CCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEeCCHHHH
Confidence 478997654 3358999999988875321 1110 000112345566788888875 345789999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee---cCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhH
Q 010250 175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS---LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE 251 (514)
Q Consensus 175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~---~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (514)
++.+++.+.... . .++++||+.... |........ ..|.. +..++..+.+.
T Consensus 77 ~~~~l~~l~~~~---~-~~g~~Vi~~~~~-h~s~~~~~~~~~~~g~~------------v~~v~~~~~~~---------- 129 (402)
T TIGR02006 77 NNLAIKGIAHFY---K-SKGNHIITSKTE-HKAVLDTCRYLEREGFE------------VTYLPPKSNGL---------- 129 (402)
T ss_pred HHHHHHHHHHhh---c-CCCCEEEECCCc-cHHHHHHHHHHHhcCCE------------EEEEccCCCCc----------
Confidence 999987664221 1 223456665544 544322211 11111 11111111100
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCC
Q 010250 252 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI 331 (514)
Q Consensus 252 ~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv 331 (514)
.+.+++++.+. +++.+|++..+++.+|.+.| +++|.++|++||+++|+|++|+ +|.. .++..+.
T Consensus 130 ---~d~~~l~~~l~----~~~~lv~v~~~~n~tG~~~~----~~~I~~l~~~~g~~livD~a~a-~g~~----~~~~~~~ 193 (402)
T TIGR02006 130 ---IDLEELKAAIR----DDTILVSIMHVNNEIGVIQD----IAAIGEICRERKVFFHVDAAQS-VGKI----PINVNEL 193 (402)
T ss_pred ---CCHHHHHHhcC----CCCEEEEEECCCcCceeccc----HHHHHHHHHHcCCEEEEEcchh-cCCc----ccCcccc
Confidence 11466666653 34678888899999999887 9999999999999999999997 5433 2233345
Q ss_pred CCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCC-CCCcHHHHHHHHHHHHHHhh--ccHHHHHHH
Q 010250 332 KPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT-YSGHPVSCAVAIEALKIYKE--RNIVEQVNK 406 (514)
Q Consensus 332 ~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t-~~~~pl~~aaa~aal~~~~~--~~~~~~~~~ 406 (514)
.+|++++| |.++ + ..+|+++++++....+.+.... +....+.. .+.+...+.+..++++.+++ +...++.++
T Consensus 194 ~~D~~~~s~~K~~g-p-~G~G~l~~~~~~~~~~~~~~~g-~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~ 270 (402)
T TIGR02006 194 KVDLMSISGHKIYG-P-KGIGALYVRRKPRVRLEALIHG-GGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLA 270 (402)
T ss_pred CCCEEEEehhhhcC-C-CceEEEEEccCCCCCCCceecC-CCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 68999888 9654 3 4589999887654433321000 00000111 22344455555577777654 234677888
Q ss_pred HHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe--------------
Q 010250 407 IAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV-------------- 471 (514)
Q Consensus 407 ~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~-------------- 471 (514)
+.++++++|+++....+....... ...+.+.|.... ...+...+ +|+.++.
T Consensus 271 l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~~------------~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~ 336 (402)
T TIGR02006 271 LRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNYVE------------GESLIMAL--KDLAVSSGSACTSASLEPSYV 336 (402)
T ss_pred HHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeCcC------------HHHHHHhc--CCEEEechhhcCCCCCCccHH
Confidence 888888888765321111111101 011123332111 11222222 3444321
Q ss_pred ----------eCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 472 ----------SGDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 472 ----------~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
....||+++....|++|||++++.|+++++.++
T Consensus 337 l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~ 379 (402)
T TIGR02006 337 LRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLR 379 (402)
T ss_pred HHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 125699999999999999999999999987754
No 195
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.80 E-value=3.1e-17 Score=168.77 Aligned_cols=323 Identities=14% Similarity=0.188 Sum_probs=194.4
Q ss_pred CCHHHHHHHHHHHhcCCc-ccc-ccc---cCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCC
Q 010250 117 SEPRLVAAATAQLNTLPF-YHS-FWN---RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGR 191 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~-~~~-~~~---~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~ 191 (514)
.++.+.+++.+.+++... .+. .+. .......++.+.+++++.....++++|++|+++++..++....
T Consensus 12 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~-------- 83 (376)
T TIGR01977 12 KPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLL-------- 83 (376)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhcc--------
Confidence 467899999888876421 100 000 0124556788889998854334589999999999998886532
Q ss_pred CCccEEEEEecCCcccceee--e-ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC
Q 010250 192 PNKKKFIARQKSYHGSTLIA--A-SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG 268 (514)
Q Consensus 192 ~~~~~ii~~~~~yHG~t~~~--~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~ 268 (514)
..+++|++....|++..... + ...|... ..++.... ...+.+++++.+.
T Consensus 84 ~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~-------------~~~d~~~l~~~~~--- 135 (376)
T TIGR01977 84 KEGDHVITTPMEHNSVARPLECLKEQIGVEI------------TIVKCDNE-------------GLISPERIKRAIK--- 135 (376)
T ss_pred CCCCEEEECcchhhHHHHHHHHHHHHcCcEE------------EEEecCCC-------------CCcCHHHHHHhcC---
Confidence 23467777766654432100 0 0001110 01111100 0112466776663
Q ss_pred CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCc
Q 010250 269 PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAY 346 (514)
Q Consensus 269 ~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~ 346 (514)
+++++|++..+++.+|.+.+ +++|.++|++||+++|+|++++ +|... +..+ ...+|+++++ |+++++
T Consensus 136 -~~~~~v~~~~~~n~tG~~~~----~~~i~~l~~~~~~~livD~a~~-~g~~~--~~~~--~~~~D~~~~s~~K~l~~p- 204 (376)
T TIGR01977 136 -TNTKLIVVSHASNVTGTILP----IEEIGELAQENGIFFILDAAQT-AGVIP--IDMT--ELAIDMLAFTGHKGLLGP- 204 (376)
T ss_pred -CCCeEEEEECCCCCccccCC----HHHHHHHHHHcCCEEEEEhhhc-cCccC--CCch--hcCCCEEEecccccccCC-
Confidence 35667778788888898887 8999999999999999999996 55432 1222 2346887655 998874
Q ss_pred ccceeEEeCHHH-HHHhhhccCCCCc--c------ccc-CCCCCcHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHh
Q 010250 347 MPIGAILVSPEV-SEVIHSQSNTLGS--F------SHG-FTYSGHPVSCAVAIEALKIYKER---NIVEQVNKIAPKFQD 413 (514)
Q Consensus 347 ~pig~v~~~~~i-~~~l~~~~~~~~~--~------~~~-~t~~~~pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~ 413 (514)
...|+++.+++. +..+......... + ... .....+...+++..++++.+.+. .+.++..++.+++++
T Consensus 205 ~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~ 284 (376)
T TIGR01977 205 QGTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLN 284 (376)
T ss_pred CCceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 356777776654 1111110000000 0 000 01123455566666788877654 356788888888888
Q ss_pred hhhhccCCCceeE--EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee---------------CCE
Q 010250 414 GVKAFSDSPIIGE--IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS---------------GDN 475 (514)
Q Consensus 414 ~L~~l~~~~~~~~--v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~---------------g~~ 475 (514)
.|+++....+... ....+.++.+.+.+.. ...+.+.|.++ ||.++.+ .+.
T Consensus 285 ~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------------~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~ 352 (376)
T TIGR01977 285 GLREINKVKIYGPADPANRVGVVSFTVEGID------------SEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGT 352 (376)
T ss_pred HHhcCCCeEEeCCCCccccCCeEEEEECCCC------------HHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCe
Confidence 8876522222211 1113456666653211 34577888887 8888642 246
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHH
Q 010250 476 IMMSPPFIMSPEEVDELISKYGK 498 (514)
Q Consensus 476 iRi~p~~~~t~e~id~~~~~l~~ 498 (514)
||+++...+|++||+.++++|++
T Consensus 353 iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 353 IRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred EEEecCCCCCHHHHHHHHHHHhh
Confidence 99999999999999999999875
No 196
>PRK10534 L-threonine aldolase; Provisional
Probab=99.80 E-value=6e-18 Score=171.18 Aligned_cols=322 Identities=14% Similarity=0.155 Sum_probs=191.7
Q ss_pred EEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHH
Q 010250 102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKL 181 (514)
Q Consensus 102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~ 181 (514)
+|||.|+ .+=| -+|.+++|+.+.......| ++.+...+|.+.|++++ +.+.+++++||++++..++..
T Consensus 1 ~~~~~~~---~~~~-p~~~~~~a~~~~~~~~~~Y-----~~~~~~~~L~~~la~~~---g~~~~~v~~~g~~a~~~~l~~ 68 (333)
T PRK10534 1 MIDLRSD---TVTR-PSRAMLEAMMAAPVGDDVY-----GDDPTVNALQDYAAELS---GKEAALFLPTGTQANLVALLS 68 (333)
T ss_pred Ccccccc---cCCC-CCHHHHHHHHhccCCCccc-----CCCHHHHHHHHHHHHHh---CCCeEEEeCchHHHHHHHHHH
Confidence 4789888 4445 7899999987755433222 14566789999999997 456778999999998888865
Q ss_pred HHHHHhhcCCCCccEEEEEecCCcccc-eeeeecCC-CccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250 182 VWYYNNALGRPNKKKFIARQKSYHGST-LIAASLSG-LPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259 (514)
Q Consensus 182 a~~~~~~~~~~~~~~ii~~~~~yHG~t-~~~~~~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (514)
.. ...++|++..++|.... ..+....+ ... ..++....|. .++++
T Consensus 69 ~~--------~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~-------------~d~~~ 115 (333)
T PRK10534 69 HC--------ERGEEYIVGQAAHNYLYEAGGAAVLGSIQP------------QPIDAAADGT-------------LPLDK 115 (333)
T ss_pred hc--------CCCCeeEEechhhhhHhcCCchHHhcCceE------------EeecCCCCCC-------------CCHHH
Confidence 42 22356776555543211 11011111 000 0011111111 11466
Q ss_pred HHHHHHHhC--CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc---cccceecccCCCCc
Q 010250 260 LEDLILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL---GTMFGCDKYSIKPD 334 (514)
Q Consensus 260 le~li~~~~--~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~---G~~~~~~~~gv~pD 334 (514)
|++.+.... ..++.+|+++..+ +|.+. +.+.+++|.++|++||++||+||++. |+.. +... ....-.+|
T Consensus 116 l~~~i~~~~~~~~~~~lv~l~np~--~G~v~-~~~~l~~i~~~~~~~~~~lvvDEA~~-~~~~~~~~~~~--~~~~~~~~ 189 (333)
T PRK10534 116 VAAKIKPDDIHFARTRLLSLENTH--NGKVL-PREYLKQAWEFTRERNLALHVDGARI-FNAVVAYGCEL--KEITQYCD 189 (333)
T ss_pred HHHhhcccCcCcccceEEEEecCC--CCeec-CHHHHHHHHHHHHHcCCeEEeeHHHH-HHHHHHcCCCH--HHHHhcCC
Confidence 666653210 0134556665322 47666 45778899999999999999999976 5322 2111 00001123
Q ss_pred --hhchhhhhcCCcccce-eEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 010250 335 --LVSFAKALSSAYMPIG-AILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKF 411 (514)
Q Consensus 335 --iv~~sK~l~gG~~pig-~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l 411 (514)
+++|||+++. ++| ++++++++++.+.... . ..+..+..+.++++++.++|+.. .+..++..+.++++
T Consensus 190 ~~~~s~SK~~~~---~~G~~~~~~~~~i~~~~~~~----~-~~~~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~r~~l 259 (333)
T PRK10534 190 SFTICLSKGLGT---PVGSLLVGNRDYIKRARRWR----K-MTGGGMRQAGILAAAGLYALKHN--VARLQEDHDNAAWL 259 (333)
T ss_pred EEEEEeEcCCCC---cccceEEcCHHHHHHHHHHH----H-HhCCchhhHHHHHHHHHHHHHhh--HHHHHHHHHHHHHH
Confidence 4579997663 578 5778999988886421 0 11122333446667777777532 12334444566788
Q ss_pred HhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHH
Q 010250 412 QDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDE 491 (514)
Q Consensus 412 ~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~ 491 (514)
.+.|+++ +.... ...+.++.+.+.+. ....+.+.|+++||++++. ..+|+...+.+|+|++++
T Consensus 260 ~~~L~~~-g~~~~---~~~~nfv~~~~~~~------------~~~~~~~~l~~~gi~v~~~-~~~rl~~~~r~t~e~~~~ 322 (333)
T PRK10534 260 AEQLREA-GADVM---RQDTNMLFVRVGEE------------QAAALGEYMRERNVLINAS-PIVRLVTHLDVSREQLAE 322 (333)
T ss_pred HHHHHhC-CCccC---CCCceEEEEECCch------------hHHHHHHHHHHcCeeecCC-ceEEEEEEeCCCHHHHHH
Confidence 8888875 22221 22466666665421 1345778999999999865 468888655689999999
Q ss_pred HHHHHHHHHH
Q 010250 492 LISKYGKALK 501 (514)
Q Consensus 492 ~~~~l~~~l~ 501 (514)
++++|++.+.
T Consensus 323 ~~~~l~~~~~ 332 (333)
T PRK10534 323 VVAHWRAFLA 332 (333)
T ss_pred HHHHHHHHhc
Confidence 9999987653
No 197
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.80 E-value=1.5e-17 Score=169.79 Aligned_cols=320 Identities=14% Similarity=0.101 Sum_probs=197.3
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ 178 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A 178 (514)
++.++|+..|. ++++ .+|.+++++.+.+...... +.+.....++.+.|++++.-...+++++++++++++..+
T Consensus 25 ~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~----~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~ 97 (356)
T PRK04870 25 ATGMVKLDAME--NPYR-LPAELRAELGERLAEVALN----RYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLL 97 (356)
T ss_pred CCCceeCcCCC--CCCC-CCHHHHHHHHHHhhccccc----cCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHH
Confidence 46788887663 4455 5889999999988642211 111123467888888887422224799999999999888
Q ss_pred HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250 179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258 (514)
Q Consensus 179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (514)
+++.. ..++.|++.+++|.+....+... |.... .++..+.|. .+.+
T Consensus 98 ~~~~~--------~~gd~vlv~~P~y~~~~~~~~~~-g~~~~------------~i~~~~~~~-------------~d~~ 143 (356)
T PRK04870 98 ALACA--------KPGATVLAPEPGFVMYRMSAKLA-GLEFV------------GVPLTADFT-------------LDLP 143 (356)
T ss_pred HHHhc--------CCCCEEEECCCCHHHHHHHHHHc-CCEEE------------EecCCCCCC-------------CCHH
Confidence 87653 33568999999998764322221 21110 111111111 1146
Q ss_pred HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCch---
Q 010250 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL--- 335 (514)
Q Consensus 259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDi--- 335 (514)
++++.+.. .++.+|++...++.+|.+.+ .+.+++|.++| ++++|+||+|..|... . +. ....-.+.+
T Consensus 144 ~l~~~~~~---~~~~~v~l~~p~NPtG~~~~-~~~~~~i~~~~---~~~ii~De~y~~~~~~-~-~~-~~~~~~~~vi~~ 213 (356)
T PRK04870 144 AMLAAIAE---HRPALVFLAYPNNPTGNLFD-DADVERIIEAA---PGLVVVDEAYQPFAGD-S-WL-PRLARFPNLLVM 213 (356)
T ss_pred HHHHHhhc---CCCCEEEEcCCCCCCCCCCC-HHHHHHHHHHC---CCEEEEECCchhhcCc-c-hH-HHHhhCCCEEEE
Confidence 67776642 23444544434666776664 45566666666 7899999999877421 1 11 111111232
Q ss_pred hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhh
Q 010250 336 VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDG 414 (514)
Q Consensus 336 v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~ 414 (514)
-+||| ++..++++|++++++++++.+... . ..++.+.+++.++..+++..+ -++..++++++.+.+.+.
T Consensus 214 ~S~SK-~~~~GlRiG~~i~~~~~i~~~~~~-------~--~~~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~ 283 (356)
T PRK04870 214 RTVSK-LGLAGLRLGYLAGHPAWIAELDKV-------R--PPYNVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAA 283 (356)
T ss_pred ecchh-hhhHHHhhhhhhCCHHHHHHHHHc-------c--CCCcCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 26899 444338999999999999888641 1 234566777777777765321 123456677777778887
Q ss_pred hhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------CCEEEEeCCCCCCHH
Q 010250 415 VKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------GDNIMMSPPFIMSPE 487 (514)
Q Consensus 415 L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------g~~iRi~p~~~~t~e 487 (514)
|+++.+ +......|.++++.+.+ ...+...|.++||.++++ .+.+|++ ..+.+
T Consensus 284 L~~~~~---~~~~~~~~~~~~~~~~~--------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis---~~~~~ 343 (356)
T PRK04870 284 LAALPG---VTVFPSAANFILVRVPD--------------AAAVFDGLKTRGVLVKNLSGMHPLLANCLRVT---VGTPE 343 (356)
T ss_pred HHhCCC---cEECCCCCeEEEEECCC--------------HHHHHHHHHHCCEEEEECCCCCCCCCCeEEEe---CCCHH
Confidence 776522 22223456667776541 245778899999999864 2479999 34789
Q ss_pred HHHHHHHHHHHH
Q 010250 488 EVDELISKYGKA 499 (514)
Q Consensus 488 ~id~~~~~l~~~ 499 (514)
++++++++|+++
T Consensus 344 ~~~~l~~al~~~ 355 (356)
T PRK04870 344 ENAQFLAALKAA 355 (356)
T ss_pred HHHHHHHHHHHh
Confidence 999999998865
No 198
>PRK07550 hypothetical protein; Provisional
Probab=99.80 E-value=4.3e-17 Score=168.35 Aligned_cols=339 Identities=13% Similarity=0.085 Sum_probs=202.0
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc-cccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEAN 175 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~-~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~ 175 (514)
.|+.++||.++... +. .++.+.+++.+.+..... .+....+..+....+++.+.+..+ ....+++++++++++|+
T Consensus 27 ~~~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 103 (386)
T PRK07550 27 ADGPLIDLSQAVPG--YP-PPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAF 103 (386)
T ss_pred cCCCeEEeCCCCCC--CC-CCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHH
Confidence 35668999887532 22 367788888877643111 111112233444455555554432 13457899999999999
Q ss_pred HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCChhHHH
Q 010250 176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEYS 253 (514)
Q Consensus 176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 253 (514)
..++++.. ..+++|++.+++|.+....... .|... ..++.. ..|.
T Consensus 104 ~~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~-~g~~~------------~~v~~~~~~~~~------------ 150 (386)
T PRK07550 104 WAAMVTLA--------GAGDEVILPLPWYFNHKMWLDM-LGIRP------------VYLPCDEGPGLL------------ 150 (386)
T ss_pred HHHHHHhc--------CCCCEEEEcCCCCcchHHHHHh-cCCEE------------EEEecCCCcCCC------------
Confidence 98887763 2356799999999765322111 11111 011110 0000
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc-cc-eecccCC
Q 010250 254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MF-GCDKYSI 331 (514)
Q Consensus 254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~-~~-~~~~~gv 331 (514)
.+.+++++++.. +..+.+++.|. +.+|.+. +.+.+++|.++|++||+++|+||++.+|...+. .. .....+.
T Consensus 151 -~~~~~l~~~~~~---~~~~v~~~~P~-NPtG~~~-~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~ 224 (386)
T PRK07550 151 -PDPAAAEALITP---RTRAIALVTPN-NPTGVVY-PPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDW 224 (386)
T ss_pred -CCHHHHHHHhcc---cCcEEEEeCCC-CCCCccc-CHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCc
Confidence 014667777652 33455666665 5566554 578899999999999999999999987732211 10 1111111
Q ss_pred CCc---hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHH
Q 010250 332 KPD---LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNK 406 (514)
Q Consensus 332 ~pD---iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~ 406 (514)
..+ +.+|||.++..++++|++++++++++.+... ....+.+.+.+++.++..+++.+++ ++..+.+++
T Consensus 225 ~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~-------~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 297 (386)
T PRK07550 225 DDTLVHLYSFSKSYALTGHRVGAVVASPARIAEIEKF-------MDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIAR 297 (386)
T ss_pred cccEEEEecchhhccCcccceEeeecCHHHHHHHHHH-------HhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 122 3378999973238999999999988877641 2223445566777777666654322 234566777
Q ss_pred HHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEEE
Q 010250 407 IAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMM 478 (514)
Q Consensus 407 ~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iRi 478 (514)
+.+.+.+.|+.... + .....-|.+.++.+..... ....++..|. ++||.+.++ .+.+|+
T Consensus 298 ~~~~l~~~L~~~~~--~-~~~~~g~~~~~~~~~~~~~----------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi 364 (386)
T PRK07550 298 RRDAFRAVFARLPG--W-ELLASGAYFAYVRHPFPDR----------PSREVARRLAKEAGILCLPGTMFGPGQEGYLRL 364 (386)
T ss_pred HHHHHHHHHHhCCC--c-eeCCCceEEEEecCCCCCC----------CHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEE
Confidence 77788888776421 1 1112234566666643110 1345777764 689999874 246999
Q ss_pred eCCCCCCHHHHHHHHHHHHHH
Q 010250 479 SPPFIMSPEEVDELISKYGKA 499 (514)
Q Consensus 479 ~p~~~~t~e~id~~~~~l~~~ 499 (514)
+.. ..+++++++++++|.+.
T Consensus 365 s~~-~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 365 AFA-NADVAGIGELVERLRAF 384 (386)
T ss_pred Eee-cCCHHHHHHHHHHHHhh
Confidence 953 35789999999998764
No 199
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.80 E-value=2.2e-17 Score=169.11 Aligned_cols=302 Identities=14% Similarity=0.194 Sum_probs=189.7
Q ss_pred chHHHHHHHHHHhcCcCC-CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee-eecCCCcccc
Q 010250 144 KPSLDLAKELLEMFTASK-MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA-ASLSGLPALH 221 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~~~-~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~-~~~s~~~~~~ 221 (514)
+...++.+.++++++... .+.+++++||++|++.++.... ..++++|+...++++..... ....|.+
T Consensus 35 ~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~--------~~~~~vlv~~~~~~~~~~~~~a~~~g~~--- 103 (363)
T TIGR02326 35 IVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAV--------PKDGKLLVVINGAYGARIVQIAEYLGIP--- 103 (363)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcC--------CCCCeEEEEeCChhhHHHHHHHHHcCCc---
Confidence 445667788888885422 3479999999999999987653 23456777777777653111 1111111
Q ss_pred CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250 222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 301 (514)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~ 301 (514)
+..++.+... ..+++++++++.+. .++..+.+-.+.+.+|++.| +++|.++|
T Consensus 104 ---------~~~v~~~~~~-------------~~d~~~l~~~l~~~--~~~~~v~~~~~~~~tG~~~~----i~~I~~l~ 155 (363)
T TIGR02326 104 ---------HHVVDTGEVE-------------PPDVVEVEAILAAD--PAITHIALVHCETTTGILNP----IEAVAKLA 155 (363)
T ss_pred ---------eEEEeCCCCC-------------CCCHHHHHHHHhhC--CCccEEEEEeecCCccccCc----HHHHHHHH
Confidence 1111211100 01157788877642 23445555555677888887 89999999
Q ss_pred HhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccceeEEeCHHHHHHhhhccCCC--Cc------
Q 010250 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNTL--GS------ 371 (514)
Q Consensus 302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~--~~------ 371 (514)
++||+++|+|++|+ +|.. ..... ...+|+++ ++|+|.|+ ..+|+++++++.++.+....... ..
T Consensus 156 ~~~g~~livD~~~~-~g~~--~~~~~--~~~~D~~~~s~~K~l~~p-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (363)
T TIGR02326 156 HRHGKVTIVDAMSS-FGGI--PIDIA--ELHIDYLISSANKCIQGV-PGFGFVIARQAELAACKGNARSLSLDLYDQWRC 229 (363)
T ss_pred HHcCCEEEEEcccc-ccCc--ccchh--hcCccEEEecCccccccC-CcceEEEECHHHHHHhhcCCCceeecHHHHHHH
Confidence 99999999999986 6543 22223 23467764 56999875 46799999998877654211000 00
Q ss_pred c--cc-cCCCCCcHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCC
Q 010250 372 F--SH-GFTYSGHPVSCAVAIEALKIYKER----NIVEQVNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKS 443 (514)
Q Consensus 372 ~--~~-~~t~~~~pl~~aaa~aal~~~~~~----~~~~~~~~~~~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~ 443 (514)
+ .. ...|..++.+..+..++++.+.++ +..++++++.+++++.|+++ +....... ...+.+..+.+.+...
T Consensus 230 ~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 308 (363)
T TIGR02326 230 MEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPIITSFYSPEDPD 308 (363)
T ss_pred HhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCceEEEEECCCCCC
Confidence 0 00 123455666777777788766443 35678888888999988776 22222111 1123344555543210
Q ss_pred CCCCCCCccchHHHHHHHHHHCCcEEEee----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 444 PNEPFPPEWGIGAYFGAQCEKHGMLVRVS----GDNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----g~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
. ....+.+.|.++||.+.++ .+.||+++...++.+|+++++++|++++
T Consensus 309 -~--------~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 309 -Y--------RFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred -C--------CHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 0 1345778899999999865 3579999877789999999999998876
No 200
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.80 E-value=4.5e-18 Score=172.07 Aligned_cols=321 Identities=15% Similarity=0.173 Sum_probs=202.0
Q ss_pred eeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc--CCCCeE
Q 010250 88 KSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA--SKMAKV 165 (514)
Q Consensus 88 ~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~--~~~~~v 165 (514)
++.|.+-+...|+..+|+..|. +.+| .+|.+++++.+.+...... . + +.....+|.+.+++++.. .+.++|
T Consensus 7 ~~~~~~~~~~~~~~~i~l~~~~--~~~~-~p~~~~~~~~~~~~~~~~~-~-Y--~~~~~~~Lr~aia~~~~~~~~~~~~i 79 (335)
T PRK14808 7 IAKRAYPYETEKRDRTYLALNE--NPFP-FPEDLVDEVFRRLNSDTLR-I-Y--YDSPDEELIEKILSYLDTDFLSKNNV 79 (335)
T ss_pred hhccCcCCCCCCCceeEecCCC--CCCC-CCHHHHHHHHHHhhhhhhh-c-C--CCCChHHHHHHHHHHhCCCCCCcceE
Confidence 4556666667889999997764 4566 5788999998877531111 0 1 222356777888887741 346789
Q ss_pred EEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCC
Q 010250 166 FFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHP 245 (514)
Q Consensus 166 ~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (514)
++++|++|++..+++.. +.|++.+++|.+....+...+.... .++....|.
T Consensus 80 ~it~Ga~~~i~~~~~~~------------d~v~v~~P~y~~~~~~~~~~g~~~~-------------~v~~~~~~~---- 130 (335)
T PRK14808 80 SVGNGADEIIYVMMLMF------------DRSVFFPPTYSCYRIFAKAVGAKFL-------------EVPLTKDLR---- 130 (335)
T ss_pred EEcCCHHHHHHHHHHHh------------CcEEECCCCHHHHHHHHHHcCCeEE-------------EecCCCcCC----
Confidence 99999999999988754 3589999999887544433322111 011100000
Q ss_pred CCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce
Q 010250 246 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG 325 (514)
Q Consensus 246 ~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~ 325 (514)
.++. . + . .....++..|.|+ +|.+.+ .+++.+++ ++++++|+||++..|. +....
T Consensus 131 -----------~~~~-~-~---~-~~~~i~i~nP~NP-TG~~~s----~~~l~~l~-~~~~~ii~DE~Y~~f~--~~~~~ 185 (335)
T PRK14808 131 -----------IPEV-N-V---G-EGDVVFIPNPNNP-TGHVFE----REEIERIL-KTGAFVALDEAYYEFH--GESYV 185 (335)
T ss_pred -----------CChh-H-c---c-CCCEEEEeCCCCC-CCCCcC----HHHHHHHH-hcCCEEEEECchhhhc--CCchH
Confidence 0011 0 1 1 2334555555555 455554 34555555 5899999999999873 21110
Q ss_pred ecccCCCCchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHH
Q 010250 326 CDKYSIKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIV 401 (514)
Q Consensus 326 ~~~~gv~pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~ 401 (514)
....-.+.++ +|||.++-.++++|++++++++++.+... . .+++.+.++..++.++++..+. ++..
T Consensus 186 -~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~-------~--~~~~~~~~~q~a~~~~l~~~~~~~~~~ 255 (335)
T PRK14808 186 -DLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRV-------R--LPFNVSYVSQMFAKVALDHREIFEERT 255 (335)
T ss_pred -HHHHhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHh-------c--CCCCCCHHHHHHHHHHHhCHHHHHHHH
Confidence 1111112333 68998883239999999999999988641 1 2355667777777777763221 2234
Q ss_pred HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCC
Q 010250 402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPP 481 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~ 481 (514)
+.+.+..+++.+.|+++ + .....+.|.++++.+.... ...+.+.|.++||+++...+.+|++
T Consensus 256 ~~~~~~r~~l~~~L~~~---g-~~~~~~~g~f~~~~l~~~~------------~~~~~~~l~~~Gi~V~~~~~~~Ris-- 317 (335)
T PRK14808 256 KFIVEERERMKSALREM---G-YRITDSRGNFVFIFMEKEE------------KERLLEHLRAKNIAVRSFREGVRIT-- 317 (335)
T ss_pred HHHHHHHHHHHHHHHHC---C-CEECCCCCeEEEEeCCCcc------------HHHHHHHHHHCCeEEEECCCCeEEe--
Confidence 45556666777777664 2 2223456888888775211 3457889999999999877789999
Q ss_pred CCCCHHHHHHHHHHHHH
Q 010250 482 FIMSPEEVDELISKYGK 498 (514)
Q Consensus 482 ~~~t~e~id~~~~~l~~ 498 (514)
..+.++.+++++.|++
T Consensus 318 -i~~~~~~~~~~~~l~~ 333 (335)
T PRK14808 318 -IGKREENDMILKELEV 333 (335)
T ss_pred -cCCHHHHHHHHHHHHh
Confidence 6778999999998864
No 201
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.80 E-value=6.8e-18 Score=172.79 Aligned_cols=337 Identities=15% Similarity=0.157 Sum_probs=200.4
Q ss_pred EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcccccc-ccCCchHHHHHHHHHHhcC-----cCCCC-eEEEeCChhH
Q 010250 101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFW-NRTTKPSLDLAKELLEMFT-----ASKMA-KVFFTNSGSE 173 (514)
Q Consensus 101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~-~~~~~~~~ela~~L~~~~~-----~~~~~-~v~~~~sGse 173 (514)
++|||.+|. ..+++++|.+.+++.+..+......... ..+.....++.+.+++++. ..+.+ .++++++..+
T Consensus 2 ~~I~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~ 79 (363)
T PF00155_consen 2 DVINLGSNA--PLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQA 79 (363)
T ss_dssp TEEESSSSS--TSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHH
T ss_pred CEEEEECCC--CCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEeccccc
Confidence 478988873 3344456665555554433000000111 1233346788888888874 12345 6666665555
Q ss_pred HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHH
Q 010250 174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS 253 (514)
Q Consensus 174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (514)
+...++.+.. . .+++.|++.+++|.+........ |.+.... + +.....|
T Consensus 80 ~~~~~~~~~~------~-~~~~~vlv~~P~y~~~~~~~~~~-g~~~~~~------~----~~~~~~~------------- 128 (363)
T PF00155_consen 80 ALFLLLRLLK------I-NPGDTVLVPDPCYPSYIEAARLL-GAEVIPV------P----LDSENDF------------- 128 (363)
T ss_dssp HHHHHHHHHH------S-STTSEEEEEESSSTHHHHHHHHT-TSEEEEE------E----EEETTTT-------------
T ss_pred chhhhhhccc------c-cccccceecCCcccccccccccc-Cceeeec------c----ccccccc-------------
Confidence 5555554442 1 34568999999998764322221 2111110 0 0000011
Q ss_pred HHHHHHHHHHHHHhCCC--cEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-e-eccc
Q 010250 254 TRLANNLEDLILKEGPE--TIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-G-CDKY 329 (514)
Q Consensus 254 ~~~~~~le~li~~~~~~--~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~-~~~~ 329 (514)
+.+.++|++.+.+...+ ++.++++...++++|... +.+.+++|.++|++||+++|+||+|.++......+ . ....
T Consensus 129 ~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~-~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 207 (363)
T PF00155_consen 129 HLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVL-SLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLL 207 (363)
T ss_dssp EETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB---HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHH
T ss_pred cccccccccccccccccccccceeeeccccccccccc-ccccccchhhhhcccccceeeeeceeccccCCCccCcccccc
Confidence 12257888888763223 346666666677777654 66889999999999999999999999773332211 1 1222
Q ss_pred CCCCchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-----hccHH
Q 010250 330 SIKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-----ERNIV 401 (514)
Q Consensus 330 gv~pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-----~~~~~ 401 (514)
.-.++++ ++||.++-.++++|++++++++++.+... .. .+..+.+.+.++.+.+.... -++..
T Consensus 208 ~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~~~~l~~~-------~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 278 (363)
T PF00155_consen 208 DEDDNVIVVGSLSKSFGLPGLRVGYIVAPPELIERLRRF-------QR--SGLSSSPMQAAAAAALSDPELVEKWLEELR 278 (363)
T ss_dssp TTTSTEEEEEESTTTTTSGGGTEEEEEEEHHHHHHHHHH-------HH--HTTSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccceeeeeccccccccccccccccchhhhhhhhhhc-------cc--cccccchhhHHHHHhhhcccccccccccch
Confidence 2233433 68998874338999999999999988742 22 22225555655555554332 13456
Q ss_pred HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee-----CCE
Q 010250 402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS-----GDN 475 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~-----g~~ 475 (514)
++++++.+++.+.|++. .+.......|.++++.+... ....+.+.|+++ ||.+.++ .++
T Consensus 279 ~~l~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~L~~~~gi~v~pg~~~~~~~~ 343 (363)
T PF00155_consen 279 ERLRENRDLLREALEEI---GITVLPPEAGFFLWVRLDPN------------DAEELAQELLEEYGILVRPGSYFGVPGY 343 (363)
T ss_dssp HHHHHHHHHHHHHHHHT---TSEEEHHSBSSEEEEEESHH------------HHHHHHHHHHHHHTEEEEEGGGGTSTTE
T ss_pred hhHHHHHHHHHHHHHHh---hhheeeccCccEEEEEcccc------------hHHHHHHHHHHhCCEEEEecCCCCCCCE
Confidence 77888888888888765 22111112455566666532 145688889988 9999974 357
Q ss_pred EEEeCCCCCCHHHHHHHHHHH
Q 010250 476 IMMSPPFIMSPEEVDELISKY 496 (514)
Q Consensus 476 iRi~p~~~~t~e~id~~~~~l 496 (514)
||++. ..+++|++++++++|
T Consensus 344 iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 344 IRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp EEEEG-GCSCHHHHHHHHHHH
T ss_pred EEEEe-ccCCHHHHHHHHhhC
Confidence 99996 589999999999886
No 202
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.80 E-value=2.8e-17 Score=170.83 Aligned_cols=340 Identities=17% Similarity=0.150 Sum_probs=199.2
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-c-cccc---cCCchHHHHHHHHHHhcCcCCCCeEEEeCChh
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-H-SFWN---RTTKPSLDLAKELLEMFTASKMAKVFFTNSGS 172 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~-~~~~---~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGs 172 (514)
++..|||..+ +|..++.+.+++.+.++..... + .... .......++ +++ ++++ ...++++|++|+|
T Consensus 26 ~~~iyld~~a------~g~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~g-~~~~~v~~~~~~t 96 (406)
T TIGR01814 26 NAVIYLDGNS------LGLMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESL-LKL-RLVG-AKEDEVVVMNTLT 96 (406)
T ss_pred CCcEEecCCC------cCcCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhh-ccc-cccC-CCCCcEEEeCCch
Confidence 3457788533 4445788889988777542211 0 1000 011222223 334 6654 3567899999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee----ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCC
Q 010250 173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA----SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET 248 (514)
Q Consensus 173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~----~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (514)
+++..+++..+. .+ .++..|++.+..|... ...+ ...|.... .....++....
T Consensus 97 ~~l~~~~~~~~~----~~-~~~~~i~~~~~~~~s~-~~~~~~~~~~~g~~~~--------~~~~~~~~~~~--------- 153 (406)
T TIGR01814 97 INLHLLLASFYK----PT-PKRYKILLEAKAFPSD-HYAIESQLQLHGLTVE--------ESMVQIEPREE--------- 153 (406)
T ss_pred HHHHHHHHHhcC----Cc-CCccEEEecCCCCChH-HHHHHHHHHhcCCCcc--------cceEEeccCCC---------
Confidence 999998876520 01 1123455444555432 1111 11111100 00000111000
Q ss_pred hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecc
Q 010250 249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDK 328 (514)
Q Consensus 249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~ 328 (514)
...+.+++++.+.+.. +++++|+++.+++.+|.+.| +++|.++|++||+++++|++|+ +|.. .+..+.
T Consensus 154 ----g~~~~~~l~~~~~~~~-~~t~lv~~~~v~~~tG~~~~----~~~i~~~~~~~g~~~~vD~aq~-~G~~--~id~~~ 221 (406)
T TIGR01814 154 ----ETLRLEDILDTIEKNG-DDIAVILLSGVQYYTGQLFD----MAAITRAAHAKGALVGFDLAHA-VGNV--PLDLHD 221 (406)
T ss_pred ----CccCHHHHHHHHHhcC-CCeEEEEEeccccccceecC----HHHHHHHHHHcCCEEEEEcccc-cCCc--cccccc
Confidence 0011466777665432 46889999999999999998 9999999999999999999998 5544 223333
Q ss_pred cCCCCchhch--hhhhcCCcccceeEEeCHHHHHHhhhccCCCCc--------ccccCC----------CCCcHHHHHHH
Q 010250 329 YSIKPDLVSF--AKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS--------FSHGFT----------YSGHPVSCAVA 388 (514)
Q Consensus 329 ~gv~pDiv~~--sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~--------~~~~~t----------~~~~pl~~aaa 388 (514)
+| +|++++ .|+|.|| .. |+++.+++..+.+.+.. .+. +....+ .+.|..++++.
T Consensus 222 ~g--vD~~~~s~hK~l~g~-pG-~~l~v~~~~~~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l 295 (406)
T TIGR01814 222 WG--VDFACWCTYKYLNAG-PG-AGAFVHEKHAHTERPRL--AGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAAL 295 (406)
T ss_pred CC--CCEEEEcCccccCCC-CC-eEEEEehhhhhhcCCCC--CcccCCCCccccccccccCCCccceeeCCccHHHHHHH
Confidence 34 566654 4999876 34 55555544333332210 000 000001 12345677777
Q ss_pred HHHHHHHhhc---cHHHHHHHHHHHHHhhhhhccC----CCcee--EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHH
Q 010250 389 IEALKIYKER---NIVEQVNKIAPKFQDGVKAFSD----SPIIG--EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFG 459 (514)
Q Consensus 389 ~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~----~~~~~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 459 (514)
.++|+.+.+. ...++.+.+.+++++.|+++.. ..+.. +....+.++.+.+. .. ...+.
T Consensus 296 ~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~~------------~~~~~ 362 (406)
T TIGR01814 296 RGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-VP------------GKAVF 362 (406)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-CC------------HHHHH
Confidence 7899988653 4577888888888888876421 11111 11223455666654 11 34577
Q ss_pred HHHHHCCcEEEeeC-CEEEEeC-CCCCCHHHHHHHHHHHHHHH
Q 010250 460 AQCEKHGMLVRVSG-DNIMMSP-PFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 460 ~~l~~~Gv~~~~~g-~~iRi~p-~~~~t~e~id~~~~~l~~~l 500 (514)
+.|.++||++...+ +.||++| ++.+|++||++++++|++.+
T Consensus 363 ~~L~~~gi~v~~~~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 363 QALIKRGVIGDKREPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred HHHHHCCEEEeccCCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 88899999887554 5799999 78999999999999998764
No 203
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.80 E-value=3.7e-17 Score=168.63 Aligned_cols=338 Identities=17% Similarity=0.201 Sum_probs=194.8
Q ss_pred EEEccCCcccccCCCCCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHH---HHhcCcCCCCeEEEeCChhHHHHH
Q 010250 102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKEL---LEMFTASKMAKVFFTNSGSEANDT 177 (514)
Q Consensus 102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L---~~~~~~~~~~~v~~~~sGseA~~~ 177 (514)
|||..++. ..++.|++++.+.++... ..++...........+.+.+ .+.+.....++++|++|++|++..
T Consensus 2 yld~aa~~------~~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~ 75 (382)
T TIGR03403 2 YLDNNATT------MLDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNW 75 (382)
T ss_pred cccCcCCC------CCCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHH
Confidence 77765553 257899999998886521 11111111111223333333 333322245799999999999999
Q ss_pred HHHHHHHHHhhcCCCCccEEEEEecCCcccceee--eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA--ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~--~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (514)
+++.+..- ....+++++|++....|+...... +...|.. +..++.++.+. .
T Consensus 76 ~~~~~~~~--~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~------------v~~v~~~~~g~-------------~ 128 (382)
T TIGR03403 76 VLKGVYFD--EILKGGKNHIITTEVEHPAVRATCAFLESLGVE------------VTYLPINEQGT-------------I 128 (382)
T ss_pred HHHHHHHh--hcccCCCCEEEEcCCccHHHHHHHHHHHHCCCE------------EEEEecCCCCC-------------C
Confidence 99865310 001133456777654443322111 1111111 11111111100 1
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCch
Q 010250 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL 335 (514)
Q Consensus 256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDi 335 (514)
+.+++++.+. +++.+|++..+++.+|.+.| +++|.++|++||+++|+|++|. +|.. ..+.....+|+
T Consensus 129 d~~~l~~~i~----~~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~~ivD~a~~-~g~~----~~~~~~~~~D~ 195 (382)
T TIGR03403 129 TAEQVREAIT----EKTALVSVMWANNETGMIFP----IKEIGEICKERGVLFHTDAVQA-IGKI----PVDVQKAGVDF 195 (382)
T ss_pred CHHHHHHhcc----cCCeEEEEEcccCCCccccC----HHHHHHHHHHcCCEEEEechhh-cCCC----ccCccccCCCE
Confidence 1466666664 34567888888888999888 8999999999999999999987 4322 12222334688
Q ss_pred hchh--hhhcCCcccceeEEeCHHHHHHhhhc---cCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHH
Q 010250 336 VSFA--KALSSAYMPIGAILVSPEVSEVIHSQ---SNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIA 408 (514)
Q Consensus 336 v~~s--K~l~gG~~pig~v~~~~~i~~~l~~~---~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~ 408 (514)
+++| |.+ |. ..+|+++++++.. +.+. ......+ ...+.|..+..++.++++...+ +...++++++.
T Consensus 196 ~~~s~~K~~-gp-~G~g~l~vr~~~~--~~p~~~g~~~~~~~---~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~ 268 (382)
T TIGR03403 196 LSFSAHKFH-GP-KGVGGLYIRKGVE--LTPLFHGGEHMGGR---RSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLR 268 (382)
T ss_pred EEEcchhhC-CC-CceEEEEECCCCC--CCCcccCCCCCCCc---ccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 8777 953 32 3478888776541 1110 0000001 1234556666666777776543 33457788888
Q ss_pred HHHHhhhhhccCCCceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---------------
Q 010250 409 PKFQDGVKAFSDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--------------- 472 (514)
Q Consensus 409 ~~l~~~L~~l~~~~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--------------- 472 (514)
+++.++|+++....+..... ..+.++.+.+.... ...+...|.++||.++.+
T Consensus 269 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~ 336 (382)
T TIGR03403 269 DRLEDALLELPDVFVVGDREHRVPNTILISIKGVE------------GEAMLWDLNKAGIAASTGSACASEDLEANPVMV 336 (382)
T ss_pred HHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCCC------------HHHHHHhhccCCEEEEchhccCCCCCCcCHHHH
Confidence 88888887652221211110 11234445443211 334666788999999842
Q ss_pred ---------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 473 ---------GDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 473 ---------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
+..||++++..+|++|||++++.|++++++++
T Consensus 337 ~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~ 377 (382)
T TIGR03403 337 AIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLR 377 (382)
T ss_pred HcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 13599999999999999999999999887654
No 204
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.79 E-value=3.1e-17 Score=168.65 Aligned_cols=322 Identities=17% Similarity=0.136 Sum_probs=192.9
Q ss_pred CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccE
Q 010250 117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 196 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ 196 (514)
.+|.+.+++.+.+.........+.+..+...++.+.|+++++. +.+.++++++|++++..++..++.... .+ .+++.
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~-~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~-~~g~~ 108 (373)
T TIGR03812 32 PHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHL-PDAYGYIVSGGTEANIQAVRAAKNLAR-EE-KRTPN 108 (373)
T ss_pred chHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCC-CCCCeEEeccHHHHHHHHHHHHHHHHh-cc-CCCcE
Confidence 6778888887776542111222222345557888899988843 335678899999999999876642110 01 12357
Q ss_pred EEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 010250 197 FIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFI 276 (514)
Q Consensus 197 ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavi 276 (514)
|++.+++|..... .....|... ..++.+..+ ..+++++++.+.. ++++.++
T Consensus 109 vl~~~~~h~~~~~-~~~~~G~~~------------~~v~~~~~~-------------~~d~~~l~~~l~~---~~~~vv~ 159 (373)
T TIGR03812 109 IIVPESAHFSFEK-AAEMLGLEL------------RYAPLDEDY-------------TVDVKDVEDLIDD---NTIGIVG 159 (373)
T ss_pred EEECCcchHHHHH-HHHHcCCeE------------EEEeeCCCC-------------CcCHHHHHHHHhh---CcEEEEE
Confidence 8877776655321 111112111 111111111 1125677777653 3356677
Q ss_pred EccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc--c-c---eecccCCCCchhchh--hhhcCCccc
Q 010250 277 AEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--M-F---GCDKYSIKPDLVSFA--KALSSAYMP 348 (514)
Q Consensus 277 vEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~--~-~---~~~~~gv~pDiv~~s--K~l~gG~~p 348 (514)
+.| .++.|.+.| +++|.++|++||+++|+|++|.++ ..+. . . .++..-...|.++++ |...++ .|
T Consensus 160 ~~~-~~~tG~~~~----~~~i~~l~~~~~~~livD~a~~~~-~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~-~~ 232 (373)
T TIGR03812 160 IAG-TTELGQIDD----IEELSKIALENGIYLHVDAAFGGF-VIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSP-IP 232 (373)
T ss_pred ECC-CCCCCccCC----HHHHHHHHHHcCCeEEEEcCchhH-HHHHHhcCCCCCCccccCCCCCEEEECccccCCCc-CC
Confidence 776 466788876 999999999999999999999744 1110 0 0 011110123554443 733333 67
Q ss_pred ceeEE-eCHHHHHHhhhccCCCCcccccC-----CCCCcHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHhhhhhcc
Q 010250 349 IGAIL-VSPEVSEVIHSQSNTLGSFSHGF-----TYSGHPVSCAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAFS 419 (514)
Q Consensus 349 ig~v~-~~~~i~~~l~~~~~~~~~~~~~~-----t~~~~pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~ 419 (514)
.|+++ .++++.+.+.... ++..+. ..+.++.+++++.++|+.+.++ +..+++.++.++|++.|+++
T Consensus 233 ~G~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~- 307 (373)
T TIGR03812 233 AGGILFRSKSYLKYLSVDA----PYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI- 307 (373)
T ss_pred ceEEEEeCHHHHhhhcccC----cccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 87666 5778877664211 111111 1133456777788888877543 46788999999999999876
Q ss_pred CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--CCEEEEeCCCCCCHHHHHHHHHHHH
Q 010250 420 DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--GDNIMMSPPFIMSPEEVDELISKYG 497 (514)
Q Consensus 420 ~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--g~~iRi~p~~~~t~e~id~~~~~l~ 497 (514)
....+ ..+...++.+.+.+ ...+.+.|.++|++++.. ...||++++..+|++|++++++.|+
T Consensus 308 g~~~~--~~~~~~~v~~~~~~--------------~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edid~l~~~L~ 371 (373)
T TIGR03812 308 GFEPV--IEPVLNIVAFEVDD--------------PEEVRKKLRDRGWYVSVTRCPKALRIVVMPHVTREHIEEFLEDLK 371 (373)
T ss_pred CCeEE--cCCCceEEEEEeCC--------------HHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHh
Confidence 21111 11223344444321 234778899999999865 3579999998999999999999987
Q ss_pred H
Q 010250 498 K 498 (514)
Q Consensus 498 ~ 498 (514)
+
T Consensus 372 ~ 372 (373)
T TIGR03812 372 E 372 (373)
T ss_pred h
Confidence 5
No 205
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.79 E-value=7.1e-17 Score=167.15 Aligned_cols=336 Identities=13% Similarity=0.079 Sum_probs=199.8
Q ss_pred eCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc---CCC-CeEEEeCCh
Q 010250 96 DVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA---SKM-AKVFFTNSG 171 (514)
Q Consensus 96 d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~---~~~-~~v~~~~sG 171 (514)
+..|+.++||..|. ..++ .++.+.+++.+.+.....|... .+..+....+++.+.+.+.. .+. +++++++|+
T Consensus 24 ~~~~~~~i~l~~~~--p~~~-~~~~~~~a~~~~~~~~~~Y~~~-~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga 99 (393)
T TIGR03538 24 PPASKPPIALSIGE--PKHP-TPAFVLEALRENLHGLSTYPTT-KGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGT 99 (393)
T ss_pred hhcCCCeEEecCCC--CCCC-CCHHHHHHHHHHhhccCCCCCC-CCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCc
Confidence 34688899988774 3344 4788999998876543333211 22334444555555444321 234 379999999
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCc-cEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC--cccCCCCCCC
Q 010250 172 SEANDTQVKLVWYYNNALGRPNK-KKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH--YWRYAHPGET 248 (514)
Q Consensus 172 seA~~~Alk~a~~~~~~~~~~~~-~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 248 (514)
++|+..++++.. .++. ..|++.+++|.+........ |... ..+++.. .|.
T Consensus 100 ~~al~~~~~~l~-------~~gd~~~vlv~~P~y~~~~~~~~~~-g~~~------------~~v~~~~~~~~~------- 152 (393)
T TIGR03538 100 REALFAFAQAVI-------NPGQAPLVVMPNPFYQIYEGAALLA-GAEP------------YFLNCTAENGFL------- 152 (393)
T ss_pred HHHHHHHHHHHc-------CCCCcceEEecCCCCcchHHHHHhc-CCeE------------EEeeccccCCCC-------
Confidence 999999988763 1333 24888899997764322211 1111 0111100 010
Q ss_pred hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc-cc-e-
Q 010250 249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MF-G- 325 (514)
Q Consensus 249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~-~~-~- 325 (514)
.+.+++++.+.+ +..+.+++.| ++.+|.+ .+.+.+++|.++|++||+++|.||+|..+...+. .. .
T Consensus 153 ------~d~~~l~~~~~~---~~k~i~l~~p-~NPtG~~-~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~ 221 (393)
T TIGR03538 153 ------PDFDAVPESVWR---RCQLLFVCSP-GNPTGAV-LSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGL 221 (393)
T ss_pred ------CCHHHHHHHHhh---cceEEEEeCC-CCCcCcc-cCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCH
Confidence 013566665542 2234445555 5556654 4678999999999999999999999987643321 11 0
Q ss_pred ---ecccCC--CCchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-
Q 010250 326 ---CDKYSI--KPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK- 396 (514)
Q Consensus 326 ---~~~~gv--~pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~- 396 (514)
....+. .+.++ +|||.++..++++|++++++++++.+... ....+++.+++.+.++.+++..-+
T Consensus 222 ~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~ 294 (393)
T TIGR03538 222 LQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEILKAFLRY-------RTYHGCAMPIPTQLASIAAWNDEQH 294 (393)
T ss_pred HHhcccccccccccEEEEecchhhcCCcccceEEEecCHHHHHHHHHH-------HHhhccCcCHHHHHHHHHHhcChHH
Confidence 111111 12232 68997654449999999999998887631 111244556777777777663210
Q ss_pred hccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee---
Q 010250 397 ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS--- 472 (514)
Q Consensus 397 ~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~--- 472 (514)
-+...+.++++.+.+.+.|++. .++ .....|.++++++.. . ...+.+.|+ ++||.+.++
T Consensus 295 ~~~~~~~~~~~~~~~~~~L~~~--~~~--~~p~gg~f~~~~~~~-~------------~~~~~~~l~~~~gV~v~pg~~f 357 (393)
T TIGR03538 295 VRENRALYREKFAAVLEILGQV--LDL--ELPDAGFYLWPKVPG-D------------DEAFARALYEEENVTVLPGRFL 357 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh--Ccc--cCCCeeEEEEEECCC-C------------HHHHHHHHHHHCCEEEeCCccc
Confidence 0123455666666676766653 111 123346777887751 0 234667765 589998643
Q ss_pred ----------CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250 473 ----------GDNIMMSPPFIMSPEEVDELISKYGKA 499 (514)
Q Consensus 473 ----------g~~iRi~p~~~~t~e~id~~~~~l~~~ 499 (514)
.+.+||+ +..+++++++++++|.+.
T Consensus 358 ~~~~~~~~~~~~~~Ris--~~~~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 358 AREAEGVNPGEGRVRIA--LVAPLEECVEAAERIRSF 392 (393)
T ss_pred cccccCCCCCCCEEEEE--ecCCHHHHHHHHHHHHHh
Confidence 1469999 566899999999998764
No 206
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.79 E-value=2.4e-18 Score=169.02 Aligned_cols=327 Identities=18% Similarity=0.194 Sum_probs=216.9
Q ss_pred EEEccCCcccccCCC--CCHHHHHHHHHHHhcCCccc---cccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250 102 YLDSLAGLWCTALGG--SEPRLVAAATAQLNTLPFYH---SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 176 (514)
Q Consensus 102 ylD~~s~~~~~~lGh--~~p~v~~A~~~~l~~~~~~~---~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~ 176 (514)
.|++.|- |+||+ ++-...+++.+.++++.... ..-.++.+.+.++++..++++ +.+..+.++-|..+|.
T Consensus 138 ~lNlgSY---NYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~---g~e~a~vF~mGf~TNs 211 (519)
T KOG1357|consen 138 CLNLGSY---NYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFL---GVEDAIVFSMGFATNS 211 (519)
T ss_pred eeeeccc---ccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhc---CCcceEEEeccccccc
Confidence 4554333 66665 33334444445555543321 122357788999999999987 3455666666776666
Q ss_pred HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHH
Q 010250 177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 256 (514)
Q Consensus 177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (514)
.-+-.. -++...|..+.--|++......+||.... -|.|++
T Consensus 212 ~~~p~l---------~~~gsLIiSDelNHaSi~~GaRLSgAtiR------------------------------VfkHNd 252 (519)
T KOG1357|consen 212 MNIPSL---------LGKGSLIISDELNHASLITGARLSGATTR------------------------------VFRHND 252 (519)
T ss_pred cCccee---------ecCCcceeeccccchheeccccccCceEE------------------------------EEecCC
Confidence 555433 24556777788889988777777765331 256777
Q ss_pred HHHHHHHHHHh---------CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-C-cccccccce
Q 010250 257 ANNLEDLILKE---------GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-A-FGRLGTMFG 325 (514)
Q Consensus 257 ~~~le~li~~~---------~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G-~gr~G~~~~ 325 (514)
+.+||+++.+. .+.+.-.|++|.+.++.|.++. |+++.++++||.++|+.||+|+ | .|++| ++.
T Consensus 253 m~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~----Lp~vvalkkkykayl~lDEAHSiGA~g~tG-rgv 327 (519)
T KOG1357|consen 253 MQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD----LPEVVALKKKYKAYLYLDEAHSIGAMGATG-RGV 327 (519)
T ss_pred HHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc----cHHHHHhhccccEEEEeeccccccccCCCC-cce
Confidence 89999998763 1335679999999999999998 8999999999999999999998 2 24555 557
Q ss_pred ecccCCCC---chh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh---
Q 010250 326 CDKYSIKP---DLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--- 397 (514)
Q Consensus 326 ~~~~gv~p---Div--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--- 397 (514)
++++|++| ||+ +|-|++++++ |++.+++++++.+...+ -.+.+....+|..+...+.+++++..
T Consensus 328 ce~~g~d~~dvDImMGtftKSfga~G---Gyiagsk~lid~lrt~s-----~~~~yat~~sppvaqq~~ssl~~i~G~dg 399 (519)
T KOG1357|consen 328 CEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGSKELIDYLRTPS-----PSALYATSLSPPVAQQILTSVKHIMGEDG 399 (519)
T ss_pred eeccCCCchhheeecceehhhccccc---ceecCcHHHHhhhccCC-----CceeecccCChHHHHHHHHHHHhhcCCCc
Confidence 88898875 333 6778887654 67889999999987431 12223334456677777888887763
Q ss_pred ----ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC
Q 010250 398 ----RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG 473 (514)
Q Consensus 398 ----~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g 473 (514)
++..+++.++..+++..|+.. .++..-........+.+-.. .....+.+.|+++++.+...+
T Consensus 400 t~~g~~k~~~l~~ns~yfr~~l~~~---gfivyG~~dSpVvplll~~~-----------~k~~~f~r~~l~~nigvVvvg 465 (519)
T KOG1357|consen 400 TNRGRQKIERLAENSRYFRWELQKM---GFIVYGNNDSPVVPLLLYGP-----------AKIVAFSREMLERNIGVVVVG 465 (519)
T ss_pred ccHHHHHHHHHHhhhHHHHHhhhcC---cEEEecCCCCCcceeeecCc-----------ccccHHHHHHHhcCceEEEEe
Confidence 234678888888998888764 11111111111111111111 112347788998887765332
Q ss_pred --------CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 474 --------DNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 474 --------~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
...|++.+..+|.|++|++++.+++.=
T Consensus 466 fPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g 500 (519)
T KOG1357|consen 466 FPATPLLESRARFCLSASHTKEDLDRALEVIDRVG 500 (519)
T ss_pred CCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhc
Confidence 347888889999999999999887653
No 207
>PRK09265 aminotransferase AlaT; Validated
Probab=99.79 E-value=8.1e-17 Score=167.28 Aligned_cols=344 Identities=16% Similarity=0.201 Sum_probs=203.2
Q ss_pred CCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-----cCCCCeEEEeCC
Q 010250 97 VNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-----ASKMAKVFFTNS 170 (514)
Q Consensus 97 ~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-----~~~~~~v~~~~s 170 (514)
..|+..+||..|.. ..+++ .++++.+++.+.+.....|.. .....+|.+.+++++. +...++|+++++
T Consensus 30 ~~~~~~i~l~~g~p-~~~~~~~~~~i~~~~~~~~~~~~~Y~~-----~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G 103 (404)
T PRK09265 30 EEGHKILKLNIGNP-APFGFEAPDEILRDVIRNLPTAQGYSD-----SKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNG 103 (404)
T ss_pred HcCCCeEEecCCCC-CcCCCCCCHHHHHHHHHHhhcCCCCCC-----CCCcHHHHHHHHHHHhccCCCCCCcccEEEeCC
Confidence 35778899988743 34565 477899998887654322211 1122355566666542 235678999999
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChh
Q 010250 171 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 250 (514)
Q Consensus 171 GseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (514)
+++++..+++... ..++.|++.+++|..........+.... .+++... +
T Consensus 104 ~~~~l~~~~~~~~--------~~gd~Vlv~~p~y~~~~~~~~~~g~~~v-------------~~~~~~~----------~ 152 (404)
T PRK09265 104 VSELIVMAMQALL--------NNGDEVLVPAPDYPLWTAAVSLSGGKPV-------------HYLCDEE----------A 152 (404)
T ss_pred hHHHHHHHHHHhC--------CCCCEEEEeCCCCcChHHHHHHcCCEEE-------------EEecccc----------c
Confidence 9999998887653 3356899999999765433222211111 0000000 0
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccC
Q 010250 251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS 330 (514)
Q Consensus 251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~g 330 (514)
.+ ..+.+++++.+. ++..+.+++.| ++.+|.+. +.+.+++|.++|++||+++|+||++..|-..+.... ....
T Consensus 153 ~~-~~d~~~l~~~~~---~~~~~v~l~~P-~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~-~~~~ 225 (404)
T PRK09265 153 GW-FPDLDDIRSKIT---PRTKAIVIINP-NNPTGAVY-SKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHI-SIAS 225 (404)
T ss_pred CC-CCCHHHHHHhcc---ccceEEEEECC-CCCCCcCC-CHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcC-CHHH
Confidence 00 011456666553 23334555666 55667655 567899999999999999999999987743332110 1111
Q ss_pred CCCc--hh---chhhhhcCCcccceeEEe--CHHH----HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-c
Q 010250 331 IKPD--LV---SFAKALSSAYMPIGAILV--SPEV----SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-R 398 (514)
Q Consensus 331 v~pD--iv---~~sK~l~gG~~pig~v~~--~~~i----~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~ 398 (514)
..++ ++ +|||.++..++++|++++ ++++ ++.+.. ....+++.+.++..++.++|...+. +
T Consensus 226 ~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l~~~~~~~ 297 (404)
T PRK09265 226 LAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDM--------LASMRLCANVPAQHAIQTALGGYQSIN 297 (404)
T ss_pred cCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHH--------HhccccCCCcHHHHHHHHHhcCchhHH
Confidence 1222 22 589998654499999996 3443 333321 1112345667777777777742111 1
Q ss_pred cHH---HHHHHHHHHHHhhhhhccCCCceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--
Q 010250 399 NIV---EQVNKIAPKFQDGVKAFSDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-- 472 (514)
Q Consensus 399 ~~~---~~~~~~~~~l~~~L~~l~~~~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-- 472 (514)
.+. +++.++.+.+.+.|+++ +.+.... .-|.++++.+....... ....+.+...|.++||.+.++
T Consensus 298 ~~~~~~~~~~~~r~~~~~~L~~~---~~~~~~~p~~g~~l~~~~~~~~~~~------~~~~~~~~~~l~~~gv~v~pg~~ 368 (404)
T PRK09265 298 ELILPGGRLYEQRDRAWELLNAI---PGVSCVKPKGALYAFPKLDPKVYPI------HDDEQFVLDLLLQEKVLLVQGTG 368 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC---CCCcccCCCcceEEEEEecccccCC------CCHHHHHHHHHHhCCEEEECchh
Confidence 121 34555666677777654 2222222 23667777775421100 011344667888999999864
Q ss_pred -----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 473 -----GDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 473 -----g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
.+.+|++ +..++|++++++++|.++++..
T Consensus 369 F~~~~~~~~Ri~--~~~~~e~l~~~l~rl~~~l~~~ 402 (404)
T PRK09265 369 FNWPEPDHFRIV--TLPRVDDLEEAIGRIGRFLSGY 402 (404)
T ss_pred hCCCCCCeEEEE--eCCCHHHHHHHHHHHHHHHHHh
Confidence 2469999 5678999999999999888643
No 208
>PRK05839 hypothetical protein; Provisional
Probab=99.79 E-value=1.7e-16 Score=163.16 Aligned_cols=329 Identities=11% Similarity=-0.005 Sum_probs=193.0
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEAND 176 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~ 176 (514)
.|+.++||..|.. .++ .++.+.+++.+.......|.. ..+..+....+++.+.+.++ ....++|++++|+.+|+.
T Consensus 22 ~~~~~i~l~~~~p--~~~-~~~~~~~a~~~~~~~~~~Y~~-~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~ 97 (374)
T PRK05839 22 KEYKGLDLTIGEP--QFE-TPKFIQDALKNNAHLLNKYPK-SAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLF 97 (374)
T ss_pred CCCCeEEcCCCCC--CCC-CCHHHHHHHHHHhhccCCCCC-CCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHH
Confidence 4889999988753 456 367888888776644322321 12233444556666655543 235689999999999998
Q ss_pred HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCChhHHHH
Q 010250 177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEYST 254 (514)
Q Consensus 177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 254 (514)
.++++.. ..++.+.|++.+++|.+........ |... ..++.. +.|..+
T Consensus 98 ~~~~~~~------~~~~gd~vlv~~P~y~~~~~~~~~~-g~~v------------~~v~~~~~~~~~~d----------- 147 (374)
T PRK05839 98 NFPQFVL------FDKQNPTIAYPNPFYQIYEGAAIAS-RAKV------------LLMPLTKENDFTPS----------- 147 (374)
T ss_pred HHHHHHh------cCCCCCEEEECCCCchhhHHHHHhc-CCEE------------EEeecccccCCcCC-----------
Confidence 8777542 1123567889999998764333222 1111 011110 001100
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccccee-ccc---C
Q 010250 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC-DKY---S 330 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~-~~~---g 330 (514)
..+ ..+. +..+.+++.|. +.+|.+. +++.+++|.++|++||+++|+||+|..|...+..... ... +
T Consensus 148 --~~~--~~~~----~~k~v~i~nP~-NPTG~~~-s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~ 217 (374)
T PRK05839 148 --LNE--KELQ----EVDLVILNSPN-NPTGRTL-SLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVG 217 (374)
T ss_pred --cch--hhhc----cccEEEEeCCC-CCcCccc-CHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccC
Confidence 011 1111 22344555554 5556544 5788999999999999999999999877322221111 100 0
Q ss_pred C-C-Cchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHH
Q 010250 331 I-K-PDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQV 404 (514)
Q Consensus 331 v-~-pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~ 404 (514)
. . +.++ +|||.++..++++|++++++++++.+... ....+++.+.+.+.++.+++..-+ -+.+.+++
T Consensus 218 ~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 290 (374)
T PRK05839 218 NESFKNVLVINSISKRSSAPGLRSGFIAGDASILKKYKAY-------RTYLGCASPLPLQKAAAVAWLDDEHAEFFRNIY 290 (374)
T ss_pred ccccCcEEEEeccccccCCccceeEEEecCHHHHHHHHHH-------HhhcCCCCChHHHHHHHHHhccchHHHHHHHHH
Confidence 1 1 2333 68998655449999999999998887631 111233445556666655553100 01234444
Q ss_pred HHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee---------CC
Q 010250 405 NKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS---------GD 474 (514)
Q Consensus 405 ~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~---------g~ 474 (514)
+++.+.+.+.|. .. ...-|.++++.+.+ ...++.+|++ +||.+.++ .+
T Consensus 291 ~~~~~~~~~~l~----~~----~p~gg~fi~~~~~~--------------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~ 348 (374)
T PRK05839 291 AKNLKLAREILG----IT----IPPATFYVWLPVDN--------------DEEFTKKLYQNEGIKVLPGSFLGRNGIGKG 348 (374)
T ss_pred HHHHHHHHHhcC----CC----CCCeeEEEEEeCCC--------------hHHHHHHHHHHCCEEEeCchhhCCCCCCCC
Confidence 444444444331 11 22346777777642 2346777764 99999873 15
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 475 NIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 475 ~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
++|++ +..+++++.+++++|.++++
T Consensus 349 ~iRis--~~~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 349 YVRIA--LVYDTPKLEKALEIIKTYLE 373 (374)
T ss_pred eEEEE--ecCCHHHHHHHHHHHHHHhh
Confidence 79999 55689999999999998764
No 209
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.79 E-value=1.3e-16 Score=162.93 Aligned_cols=327 Identities=14% Similarity=0.101 Sum_probs=188.7
Q ss_pred CEEEEccCCcccccCCCC--CHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250 100 KKYLDSLAGLWCTALGGS--EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT 177 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~--~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~ 177 (514)
+.+|+.. |.. .+||-+ +|++++++.+.++.+ ....+...++++++++++ +.+++++++||++|+..
T Consensus 8 ~~~ina~-g~~-t~~g~s~~~~~v~~a~~~~~~~~-------~~~~~~~~~~~~~~a~~~---g~~~~~~~~g~t~al~~ 75 (363)
T TIGR01437 8 KKVINAS-GKM-TILGVSTVSDEVADAQKRGAQNY-------FEIKELVNKTGEYIANLL---GVEDAVIVSSASAGIAQ 75 (363)
T ss_pred ceEEECC-cEe-ecCCCCCCCHHHHHHHHHHHhcC-------CCHHHHHHHHHHHHHHhh---CCCeEEEEcCHHHHHHH
Confidence 4566643 333 778875 899999999987653 124466778889999887 34689999999999999
Q ss_pred HHHHHHHHHhhcCC-----------CCccEEEEEecCCcccc---eeeeecCCCccccCCCCCCCCcccccCCCCcccCC
Q 010250 178 QVKLVWYYNNALGR-----------PNKKKFIARQKSYHGST---LIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYA 243 (514)
Q Consensus 178 Alk~a~~~~~~~~~-----------~~~~~ii~~~~~yHG~t---~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (514)
+++.+.. .|. -.++.||+..+.|.... ...+.++|.... .++.. +
T Consensus 76 al~al~~----~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v------------~v~~~--~--- 134 (363)
T TIGR01437 76 SVAAVIT----RGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVV------------EAGYA--N--- 134 (363)
T ss_pred HHHHHhc----CCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEE------------EEcCC--C---
Confidence 9987641 110 01235666654443221 111111221110 01110 0
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc
Q 010250 244 HPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM 323 (514)
Q Consensus 244 ~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~ 323 (514)
..+++++++++. +++.+++++....+..|.+.+ +++|.++|++||+++|+|++|. . ...
T Consensus 135 ----------~~d~~~le~ai~---~~t~ai~~v~~~~~~~g~~~~----~~~i~~~a~~~gi~vivD~a~~-~--~~~- 193 (363)
T TIGR01437 135 ----------ECSAEQLEAAIT---EKTAAILYIKSHHCVQKSMLS----VEDAAQVAQEHNLPLIVDAAAE-E--DLQ- 193 (363)
T ss_pred ----------CCCHHHHHHhcC---hhceEEEEEecCCCCcCCcCC----HHHHHHHHHHcCCeEEEECCCC-C--chH-
Confidence 012577888775 233344445544445566666 8999999999999999999996 2 100
Q ss_pred ceecccCCCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--cc
Q 010250 324 FGCDKYSIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RN 399 (514)
Q Consensus 324 ~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~ 399 (514)
....+| .|++++| |.|+| +..|++++++++++.+...... .+..+.......++..++++.+.+ .+
T Consensus 194 -~~~~~g--~D~~~~S~~K~l~g--p~~G~l~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~~gl~aAl~~~~~~~~~ 263 (363)
T TIGR01437 194 -KYYRLG--ADLVIYSGAKAIEG--PTSGLVLGKKKYIEWVKLQSKG-----IGRAMKVGKENILGLTAALEQYLSTGKE 263 (363)
T ss_pred -HHHHcC--CCEEEEeCCcccCC--CceEEEEEcHHHHHHHHhccCC-----CcceeccCHHHHHHHHHHHHHHHccCcc
Confidence 011123 4877665 98976 4688888888888776431110 001111111234444455665543 23
Q ss_pred HHHHHHHHHHHHHhhhhhccCCCceeEEEeeee---eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC--cEEEe---
Q 010250 400 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGL---ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG--MLVRV--- 471 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--v~~~~--- 471 (514)
..+...++.++++++|+++............+. ...+.|....... ....+.+.|.++| |.+++
T Consensus 264 ~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~~g~--------~~~~l~~~L~~~~~~I~~r~~~~ 335 (363)
T TIGR01437 264 SGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESELGM--------TAADVVQALRQGEPAIYTRGYKA 335 (363)
T ss_pred cHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccCCCC--------CHHHHHHHHhcCCCCEEEeeeee
Confidence 444555566678888887632222111111111 1223333211000 1456888888777 77764
Q ss_pred eCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250 472 SGDNIMMSPPFIMSPEEVDELISKYGKA 499 (514)
Q Consensus 472 ~g~~iRi~p~~~~t~e~id~~~~~l~~~ 499 (514)
..+.+||.|+ +.+++|++.++++|++.
T Consensus 336 ~~~~~~l~~~-~~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 336 NEGIIEIDPR-SVTGGQLDIIVERIREI 362 (363)
T ss_pred cCCeEEEEee-cCCHHHHHHHHHHHHHh
Confidence 2356999987 57799999999999875
No 210
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.78 E-value=2.9e-17 Score=166.31 Aligned_cols=306 Identities=14% Similarity=0.115 Sum_probs=197.7
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV 179 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al 179 (514)
.+++||.+|. +++|...+.+.. ..+.. | +... .+|.+.|++.++-...++|++++|++|++....
T Consensus 24 ~~~i~ls~Ne--np~~~~~~~~~~---~~~~~---Y------p~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~ 88 (339)
T PRK06959 24 DAWLDLSTGI--NPHGYPVPPVPA---DAWRR---L------PEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRALP 88 (339)
T ss_pred hhhceeccCC--CCCCCCCCCCCH---HHHHh---C------CCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHH
Confidence 5689999887 788876333321 22222 1 3233 789999999885434579999999999987554
Q ss_pred HHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250 180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259 (514)
Q Consensus 180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (514)
.+. .+ .+|++.+++|.+........+. .. ++.|. ++
T Consensus 89 ~~~--------~~--g~v~v~~P~y~~y~~~~~~~g~-~~--------------~~v~~-------------------~~ 124 (339)
T PRK06959 89 ALL--------PR--GRVGIAPLAYSEYAPAFARHGH-RV--------------VPLDE-------------------AA 124 (339)
T ss_pred Hhc--------CC--CeEEEcCCCcHHHHHHHHHCCC-EE--------------Eeecc-------------------cc
Confidence 322 13 3488899999876433332221 11 00110 00
Q ss_pred HHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh---
Q 010250 260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--- 336 (514)
Q Consensus 260 le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--- 336 (514)
+. +.+ ....++++.|. +.+|.+. +.+.++++.+.|+++++++|+||+|..|... ... ....+ .++++
T Consensus 125 -~~-~~~---~~~~v~l~nPn-NPTG~~~-s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~-~s~-~~~~~-~~~vi~l~ 194 (339)
T PRK06959 125 -DT-LPA---ALTHLIVVNPN-NPTAERL-PAARLLRWHAQLAARGGTLIVDEAFADTLPA-ASL-AAHTD-RPGLVVLR 194 (339)
T ss_pred -hh-ccc---cCCEEEEeCCC-CCCCCCC-CHHHHHHHHHHHHHcCCEEEEECCCccCCCc-ccc-hhccC-CCCEEEEe
Confidence 11 110 11357888885 5556554 5567888888899999999999999877321 111 11111 23433
Q ss_pred chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhhh
Q 010250 337 SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDGV 415 (514)
Q Consensus 337 ~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~L 415 (514)
+|||.++-.++++|++++++++++.+... ...++.+.+++.++.++|+.-. .+...+.+++.++++.+.|
T Consensus 195 SfSK~~gl~GlRiGy~v~~~~li~~l~~~---------~~~~~vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L 265 (339)
T PRK06959 195 SVGKFFGLAGVRAGFVLAAPALLAALRDA---------LGAWTVSGPARHAVRAAFADAAWQAAMRERLAADGARLAALL 265 (339)
T ss_pred cChhhcCCcchheEEEecCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 79998873338999999999999998742 1245567788888888885311 1345677888888888888
Q ss_pred hhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--CEEEEeCCCCCCHHHHHHHH
Q 010250 416 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIMMSPPFIMSPEEVDELI 493 (514)
Q Consensus 416 ~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--~~iRi~p~~~~t~e~id~~~ 493 (514)
+++ .... ...+.++++.+.+ ...+.+.|.++||+++..+ ++||++ +..+++|+++++
T Consensus 266 ~~~-g~~~----~~~~~f~~~~~~~--------------~~~l~~~l~~~GI~vr~~~~~~~lRis--i~~~~~e~~~l~ 324 (339)
T PRK06959 266 RAH-GFAV----HATPLFSWTDDPR--------------AAALHAALARRGIWTRYFAPPPSVRFG--LPADEAEWQRLE 324 (339)
T ss_pred HHC-CCCc----cCcceEEEEeCCC--------------HHHHHHHHHhCCeEEEECCCCCeEEEE--CCCCHHHHHHHH
Confidence 876 2221 1234555555421 3457889999999998654 579999 446889999999
Q ss_pred HHHHHHHHHHH
Q 010250 494 SKYGKALKATE 504 (514)
Q Consensus 494 ~~l~~~l~~~~ 504 (514)
++|++.++.+.
T Consensus 325 ~al~~~~~~~~ 335 (339)
T PRK06959 325 DALAECVPTLA 335 (339)
T ss_pred HHHHHHHHHHh
Confidence 99988776654
No 211
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.78 E-value=5.3e-17 Score=164.14 Aligned_cols=282 Identities=12% Similarity=0.055 Sum_probs=176.3
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 221 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~ 221 (514)
+.+...+|.+.|++.+. ...++|++++|+++++..++.+.. + .++++.+++|......+...+....
T Consensus 38 p~~~~~~lr~~ia~~~~-~~~~~I~it~Gs~~~l~~~~~~~~--------~--~~vv~~~P~y~~y~~~~~~~G~~v~-- 104 (332)
T PRK06425 38 PEISYTDIEDQIKIYTQ-GLKIKVLIGPGLTHFIYRLLSYIN--------V--GNIIIVEPNFNEYKGYAFTHGIRIS-- 104 (332)
T ss_pred cCcCHHHHHHHHHHHhC-CCcceEEECCCHHHHHHHHHHHhC--------C--CcEEEeCCChHHHHHHHHHcCCeEE--
Confidence 34456889999999874 456789999999999998886421 2 3688889999887544443322111
Q ss_pred CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250 222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 301 (514)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~ 301 (514)
.++... + +. +.+. +.+. +....+++.|.+ .+|.+. +.+.+++|.++|
T Consensus 105 -----------~vp~~~-~-----~~--------~~~~----l~~~--~~k~v~l~nP~N-PTG~~~-s~~~~~~l~~~a 151 (332)
T PRK06425 105 -----------ALPFNL-I-----NN--------NPEI----LNNY--NFDLIFIVSPDN-PLGNLI-SRDSLLTISEIC 151 (332)
T ss_pred -----------EEeCCc-c-----cC--------cHHH----Hhhc--CCCEEEEeCCCC-CcCCcc-CHHHHHHHHHHH
Confidence 111100 0 00 0122 2221 233455566654 555543 568899999999
Q ss_pred HhcCCEEEEechhcCcccccccceecccCCCCchh---chhhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCC
Q 010250 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV---SFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 377 (514)
Q Consensus 302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv---~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t 377 (514)
++||+++|+||++..|...+..-......-.+.++ +|||.++ .| +++|++++++++++.+... ...
T Consensus 152 ~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~G-lRiGy~v~~~~li~~l~~~---------~~~ 221 (332)
T PRK06425 152 RKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPS-LRIGYIATDDYNMKISRKI---------TEP 221 (332)
T ss_pred HHcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecHHhcCCch-hhheeeecCHHHHHHHHHc---------CCC
Confidence 99999999999999884332111111111113333 6899888 55 8999999999999888742 123
Q ss_pred CCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHH
Q 010250 378 YSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGA 456 (514)
Q Consensus 378 ~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~ 456 (514)
+..+..++.+ +...+.-. .++..+.++++++++.+.|+++ ++.......|.++++.+.+ ..
T Consensus 222 ~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~---g~~~~~~~~g~f~~~~~~~--------------~~ 283 (332)
T PRK06425 222 WSVCDPAIDF-IRSIDLDYVAKHSLDIMENERSYLINNLEAM---GFRAAGDPSANFITFMIPD--------------AH 283 (332)
T ss_pred CccCHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC---CCEECCCCCceEEEEEcCC--------------HH
Confidence 3334443322 22221100 1245677778888888888765 2211112457777777641 34
Q ss_pred HHHHHHHHCCcEEEeeC-------CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 457 YFGAQCEKHGMLVRVSG-------DNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 457 ~~~~~l~~~Gv~~~~~g-------~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
.+.+.|+++||.++++. +.+||+ ..++++.++++++|++.+
T Consensus 284 ~~~~~l~~~gi~v~~~~~f~~~~~~~iRis---~~~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 284 DFYSYLLKNGILVRLLDDYECLGEQYIRIA---IRRRSFNIKLVNALRNFL 331 (332)
T ss_pred HHHHHHHHCCeEEEECCCCCCCCCCEEEEE---eCCHHHHHHHHHHHHHHh
Confidence 57889999999998741 479999 568899999999998764
No 212
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.78 E-value=6.3e-17 Score=167.68 Aligned_cols=306 Identities=14% Similarity=0.132 Sum_probs=195.3
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee-ecCCCcccc
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA-SLSGLPALH 221 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~-~~s~~~~~~ 221 (514)
.+...++.+++.++++....+.+++++||+++++.++...+ .++++||+.+.+|++...... ...|..
T Consensus 41 ~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~--------~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~--- 109 (401)
T PLN02409 41 PALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTL--------SPGDKVVSFRIGQFSLLWIDQMQRLNFD--- 109 (401)
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcC--------CCCCEEEEeCCCchhHHHHHHHHHcCCc---
Confidence 34566778888888754333578999999999999987653 345789999887776532111 111111
Q ss_pred CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHH-
Q 010250 222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV- 300 (514)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l- 300 (514)
+..++.+.. . . .+.+++++.+.....+++.+|++..+.+.+|.+.| +++|.++
T Consensus 110 ---------v~~v~~~~~------~-~------~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~----~~~i~~l~ 163 (401)
T PLN02409 110 ---------VDVVESPWG------Q-G------ADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND----LAGVRKLL 163 (401)
T ss_pred ---------eEEEECCCC------C-C------CCHHHHHHHHhhCcCCCccEEEEEeecccccccCC----HHHHHHHH
Confidence 111111100 0 0 01477887776421125677777777777898887 8999999
Q ss_pred -HHhcCCEEEEechhcCcccccccceecccCCCCchhch--hhhhcCCcccceeEEeCHHHHHHhhhccCCC---C----
Q 010250 301 -VKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSAYMPIGAILVSPEVSEVIHSQSNTL---G---- 370 (514)
Q Consensus 301 -~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~--sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~---~---- 370 (514)
|+++|+++|+|++|+ +|.. .++......|++++ .|+|+++ ..+|++++++++++.+.+..... +
T Consensus 164 ~~~~~g~~~vvD~v~s-~g~~----~id~~~~~~D~~~~s~~K~l~~P-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (401)
T PLN02409 164 DCAQHPALLLVDGVSS-IGAL----DFRMDEWGVDVALTGSQKALSLP-TGLGIVCASPKALEASKTAKSPRVFFDWADY 237 (401)
T ss_pred hhhccCcEEEEEcccc-cCCc----cccccccCccEEEEcCccccCcC-CCcceeEECHHHHHHHhcCCCCCeecCHHHH
Confidence 999999999999997 5422 22222334577654 5999876 46999999999988876421110 0
Q ss_pred -cc-ccc-C-CCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeE--EEeeeeeEEEEEccC
Q 010250 371 -SF-SHG-F-TYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGE--IRGTGLILGTEFADN 441 (514)
Q Consensus 371 -~~-~~~-~-t~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~--v~g~g~~~~i~~~~~ 441 (514)
.+ ..+ . .++.+.....+..++++.+.+ +++.++.+++.+++++.|+++ ...+... -...+.+..+.+++.
T Consensus 238 ~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~~~~s~~v~~~~~p~~ 316 (401)
T PLN02409 238 LKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLCTKKPEWRSDTVTAVVVPEG 316 (401)
T ss_pred HHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcccceEEEeCCCC
Confidence 00 011 1 234455567777788887765 346788888999999998876 2222221 111223444544321
Q ss_pred CCCCCCCCCccchHHHHHHHH-HHCCcEEEee-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 442 KSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVS-----GDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~-----g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
. ....+...+ .+.|+.+..+ +..+|++....++++|+..++++|++++.++
T Consensus 317 ~-----------~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 317 I-----------DSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDV 373 (401)
T ss_pred C-----------CHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 1 123465555 4679998843 5679999999999999999999999998765
No 213
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.78 E-value=3.5e-17 Score=165.31 Aligned_cols=270 Identities=16% Similarity=0.163 Sum_probs=174.2
Q ss_pred HHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCC
Q 010250 146 SLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFD 225 (514)
Q Consensus 146 ~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~ 225 (514)
..++.+.++++++ ...+++++++|+++++..+.++. ..+ +|++.+++|++....... .|...
T Consensus 49 ~~~lr~~la~~~~-~~~~~i~~t~G~~~~i~~~~~~l---------~~g-~vl~~~p~y~~~~~~~~~-~g~~~------ 110 (330)
T TIGR01140 49 YDELRAAAAAYYG-LPAASVLPVNGAQEAIYLLPRLL---------APG-RVLVLAPTYSEYARAWRA-AGHEV------ 110 (330)
T ss_pred HHHHHHHHHHHhC-CChhhEEECCCHHHHHHHHHHHh---------CCC-eEEEeCCCcHHHHHHHHH-cCCEE------
Confidence 4788899999874 34578999999999988865443 223 689999999876422211 11110
Q ss_pred CCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC
Q 010250 226 LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD 305 (514)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~g 305 (514)
..++ +.+++++.+. +..+.+++.| ++.+|.+ ++.+.+++|.++|++||
T Consensus 111 --------~~~~------------------d~~~l~~~~~----~~~~v~i~~p-~NPtG~~-~~~~~~~~l~~~a~~~~ 158 (330)
T TIGR01140 111 --------VELP------------------DLDRLPAALE----ELDVLVLCNP-NNPTGRL-IPPETLLALAARLRARG 158 (330)
T ss_pred --------EEeC------------------CHHHHHhhcc----cCCEEEEeCC-CCCCCCC-CCHHHHHHHHHHhHhcC
Confidence 0111 1466666653 2235666777 4555654 46788999999999999
Q ss_pred CEEEEechhcCcccccccceecccCCCCchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcH
Q 010250 306 ILFIADEVICAFGRLGTMFGCDKYSIKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 382 (514)
Q Consensus 306 illI~DEv~tG~gr~G~~~~~~~~gv~pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~p 382 (514)
+++|+||+|.+|...... ....+..++++ +|||.++..++++|++++++++++.+... ..++..++
T Consensus 159 ~~ii~De~y~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~---------~~~~~~s~ 227 (330)
T TIGR01140 159 GWLVVDEAFIDFTPDASL--APQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLARLREA---------LGPWTVNG 227 (330)
T ss_pred CEEEEECcccccCCccch--hhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHHHHHHhc---------CCCCCchH
Confidence 999999999877432111 11111123333 78999984338999999999999988742 12455677
Q ss_pred HHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHH
Q 010250 383 VSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQ 461 (514)
Q Consensus 383 l~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (514)
++++++.+.++.-. .+...++++++.+.+++.|+++ +.+....+.|.+.++.+.+ ...+.++
T Consensus 228 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~f~~~~~~~--------------~~~l~~~ 290 (330)
T TIGR01140 228 PARAAGRAALADTAWQAATRARLAAERARLAALLARL---GGLEVVGGTALFLLVRTPD--------------AAALHEA 290 (330)
T ss_pred HHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhC---CCceECCCCCeEEEEEcCC--------------HHHHHHH
Confidence 77777776665211 1234566777777777777665 3222233456777776542 2357899
Q ss_pred HHHCCcEEEeeC-------CEEEEeCCCCCCHHHHHHHHHHH
Q 010250 462 CEKHGMLVRVSG-------DNIMMSPPFIMSPEEVDELISKY 496 (514)
Q Consensus 462 l~~~Gv~~~~~g-------~~iRi~p~~~~t~e~id~~~~~l 496 (514)
|+++||.+.++. +.|||+ +....++ +.++.+|
T Consensus 291 l~~~gi~v~pg~~f~~~~~~~iRi~--~~~~~~~-~~~~~~l 329 (330)
T TIGR01140 291 LARRGILIRDFDNFPGLDPRYLRFA--LPTDEEN-DRLEEAL 329 (330)
T ss_pred HHHCCEEEEECCCCCCCCCCEEEEE--ecCHHHH-HHHHHhh
Confidence 999999998741 469999 4444455 7777665
No 214
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.78 E-value=8e-17 Score=164.84 Aligned_cols=336 Identities=15% Similarity=0.146 Sum_probs=189.8
Q ss_pred CCCCCHHHHHHHHHHHhcCCcccc----ccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhc
Q 010250 114 LGGSEPRLVAAATAQLNTLPFYHS----FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNAL 189 (514)
Q Consensus 114 lGh~~p~v~~A~~~~l~~~~~~~~----~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~ 189 (514)
=|+..|.+++++.+.-......+. .-....+...++.++++++++ .+++++++||++|+..++....
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g---~~~i~~~~g~t~al~~~l~~~~------ 80 (361)
T cd06452 10 GGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLG---MDEARVTPGAREGKFAVMHSLC------ 80 (361)
T ss_pred CCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcC---CceEEEeCCHHHHHHHHHHHhc------
Confidence 356678888888776632211111 011123567889999999873 4789999999999999987653
Q ss_pred CCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC-
Q 010250 190 GRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG- 268 (514)
Q Consensus 190 ~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~- 268 (514)
.++++|++.+.+|.+.. ..+...|... ..++.... + .+ ..+++++++.+.+..
T Consensus 81 --~~gd~Vl~~~~~~~~~~-~~~~~~g~~~------------~~v~~~~~------~----~~-~~d~~~l~~~l~~~~~ 134 (361)
T cd06452 81 --EKGDWVVVDGLAHYTSY-VAAERAGLNV------------REVPNTGH------P----EY-HITPEGYAEVIEEVKD 134 (361)
T ss_pred --CCCCEEEEcCCcchHHH-HHHHhcCCEE------------EEEecCCC------C----Cc-ccCHHHHHHHHHHHhh
Confidence 23456777666655442 1122122111 11111000 0 00 112567777665321
Q ss_pred --CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcC
Q 010250 269 --PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSS 344 (514)
Q Consensus 269 --~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~g 344 (514)
..++.+|++...++..|.+.+ +++|.++|++||+++|+||+|. +|.. .+....++. |++ +++|++++
T Consensus 135 ~~~~~~~lv~l~~p~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~--~~~~~~~~~--d~~~~s~~K~l~~ 205 (361)
T cd06452 135 EFGKPPALALLTHVDGNYGNLHD----AKKIAKVCHEYGVPLLLNGAYT-VGRM--PVSGKELGA--DFIVGSGHKSMAA 205 (361)
T ss_pred ccCCCceEEEEECCCCCCeeecc----HHHHHHHHHHcCCeEEEECCcc-cCCc--CCCHHHcCC--CEEEecCCccccC
Confidence 124666777666777787766 9999999999999999999997 4332 122233343 554 57799987
Q ss_pred CcccceeEEeCHHHHHHhhhccCCCCc---ccccCCCCCcHHHHHHHHHHHHHHhhc-cHHHHHHHHHHHHHhhhhhccC
Q 010250 345 AYMPIGAILVSPEVSEVIHSQSNTLGS---FSHGFTYSGHPVSCAVAIEALKIYKER-NIVEQVNKIAPKFQDGVKAFSD 420 (514)
Q Consensus 345 G~~pig~v~~~~~i~~~l~~~~~~~~~---~~~~~t~~~~pl~~aaa~aal~~~~~~-~~~~~~~~~~~~l~~~L~~l~~ 420 (514)
+ .++|++++++++++.+......... ...++|. .+..+.++.++++.+.+. +...+..++.+++++.|+++..
T Consensus 206 ~-~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l~g 282 (361)
T cd06452 206 S-APIGVLATTEEWADIVFRTSQMFKIKEVELLGCTL--RGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEKIEG 282 (361)
T ss_pred C-CCeEEEEECHHHHHHHhccccccccceeeeecccc--CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 6 5899999999998888643211100 0111221 122344445555543321 1223333445788888876622
Q ss_pred CCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--CEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250 421 SPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIMMSPPFIMSPEEVDELISKYGK 498 (514)
Q Consensus 421 ~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--~~iRi~p~~~~t~e~id~~~~~l~~ 498 (514)
..+.........++.++... .... .......+..+.+.|+++||.....+ +.+|++.+ .+|+||++.++++|++
T Consensus 283 ~~v~~~~~~~~n~~~~~~~~--~~~~-~~~~~~~~~~~~~~L~~~gI~~~~~~~~~~~ri~~~-g~~~e~~~~l~~al~~ 358 (361)
T cd06452 283 IKQLGEKPKNHDLMFFETPS--FDEI-AKKHKRRGYFLYSELKKRGIHGIKPGLTRYFKLSTY-GLTWEQVEYVVDAFKE 358 (361)
T ss_pred eEEECCCCCCCceEEEEcCC--cchh-hhhccccchhHHHHHHHcCceEEcCCCceEEEEEec-CCCHHHHHHHHHHHHH
Confidence 21111111223344444320 0000 00000012347789999999965433 45888853 3799999999999986
Q ss_pred HH
Q 010250 499 AL 500 (514)
Q Consensus 499 ~l 500 (514)
++
T Consensus 359 ~~ 360 (361)
T cd06452 359 IA 360 (361)
T ss_pred Hh
Confidence 54
No 215
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.78 E-value=2.8e-17 Score=168.88 Aligned_cols=328 Identities=18% Similarity=0.226 Sum_probs=210.8
Q ss_pred EEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-----ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250 102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-----HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 176 (514)
Q Consensus 102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-----~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~ 176 (514)
|||-.+ .|..++.|.+++.+.+...... +.+.....+...+..+.++++++....+.++|++++++|++
T Consensus 2 Yld~~~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~ 75 (371)
T PF00266_consen 2 YLDNAG------TGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALN 75 (371)
T ss_dssp EEBTSS------S-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHH
T ss_pred EeeCCC------ccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhh
Confidence 677533 3557899999999987653111 11111123445677888888885432278999999999999
Q ss_pred HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee---cCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHH
Q 010250 177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS---LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS 253 (514)
Q Consensus 177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~---~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (514)
.++.....-. .++++|++.+..|++....... ..|... ..++.+.. +
T Consensus 76 ~~~~~l~~~~-----~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v------------~~i~~~~~------~------- 125 (371)
T PF00266_consen 76 AVASSLLNPL-----KPGDEVLVTSNEHPSNRYPWEEIAKRKGAEV------------RVIPADPG------G------- 125 (371)
T ss_dssp HHHHHHHHHG-----TTTCEEEEEESSHHHHHHHHHHHHHHTTEEE------------EEEEEGTT------S-------
T ss_pred hhhhcccccc-----ccccccccccccccccccccccccccchhhh------------cccccccc------c-------
Confidence 9998773211 4457899999888876511111 111111 01111000 0
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCC
Q 010250 254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKP 333 (514)
Q Consensus 254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~p 333 (514)
..+.+++++.+. +++.+|++..+.+..|.+.| +++|.++|+++|+++++|-+|+ +|.. .++.....+
T Consensus 126 ~~~~~~~~~~l~----~~~~lv~~~~~~~~tG~~~p----i~~I~~~~~~~~~~~~vD~~~~-~g~~----~id~~~~~~ 192 (371)
T PF00266_consen 126 SLDLEDLEEALN----PDTRLVSISHVENSTGVRNP----IEEIAKLAHEYGALLVVDAAQS-AGCV----PIDLDELGA 192 (371)
T ss_dssp SCSHHHHHHHHH----TTESEEEEESBETTTTBBSS----HHHHHHHHHHTTSEEEEE-TTT-TTTS----S--TTTTTE
T ss_pred hhhhhhhhhhhc----cccceEEeecccccccEEee----eceehhhhhccCCceeEechhc-cccc----ccccccccc
Confidence 001477777775 57889999999999999988 9999999999999999999997 6544 233334457
Q ss_pred chhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCcc-----c------ccCCC---CCcHHHHHHHHHHHHHHhh
Q 010250 334 DLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF-----S------HGFTY---SGHPVSCAVAIEALKIYKE 397 (514)
Q Consensus 334 Div~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~-----~------~~~t~---~~~pl~~aaa~aal~~~~~ 397 (514)
|++++| | |.|+ ..+|+++++++.++.+.+........ . ....| ..+.....+..++++.+.+
T Consensus 193 D~~~~s~~K-l~gp-~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~ 270 (371)
T PF00266_consen 193 DFLVFSSHK-LGGP-PGLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEE 270 (371)
T ss_dssp SEEEEESTS-TTSS-STEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHH
T ss_pred ceeeecccc-cCCC-CchhhheehhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhc
Confidence 888776 9 8886 57899999999998886422111100 0 00001 2344555666677877754
Q ss_pred ---ccHHHHHHHHHHHHHhhhhhccCCCcee--EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee
Q 010250 398 ---RNIVEQVNKIAPKFQDGVKAFSDSPIIG--EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS 472 (514)
Q Consensus 398 ---~~~~~~~~~~~~~l~~~L~~l~~~~~~~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~ 472 (514)
+++.++..++.+++++.|+++....+.. .-...+.++.+.+.... ...+.+.|.++||.++.+
T Consensus 271 ~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------~~~~~~~L~~~~I~~~~G 338 (371)
T PF00266_consen 271 IGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPGSD------------ADDVVKYLEERGIAVSTG 338 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTSS------------HHHHHHHHHHHTEEEEES
T ss_pred cccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecCCC------------HHHHHHHHhhcCEEEecc
Confidence 4567888889999999998863211111 12334667777774322 456788899999999872
Q ss_pred -------------CCEEEEeCCCCCCHHHHHHH
Q 010250 473 -------------GDNIMMSPPFIMSPEEVDEL 492 (514)
Q Consensus 473 -------------g~~iRi~p~~~~t~e~id~~ 492 (514)
+..||+++....|++|||++
T Consensus 339 ~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 339 SACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp TTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred CcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 16899999999999999975
No 216
>PRK06855 aminotransferase; Validated
Probab=99.78 E-value=1.5e-16 Score=166.48 Aligned_cols=352 Identities=14% Similarity=0.112 Sum_probs=197.5
Q ss_pred CCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHH
Q 010250 99 GKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEAN 175 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~ 175 (514)
|+..+++..|.. ...+. .++.+.+++.+.+.... +.+....+..+....+++.+.+..+ ..+.++|++++++.+|+
T Consensus 31 g~~~~~~~~G~p-~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al 109 (433)
T PRK06855 31 GVKITWENIGDP-IAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAI 109 (433)
T ss_pred cccccccccCCC-cccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHH
Confidence 556666654421 11244 46677788887765421 1111112233344445555544322 23567899999999999
Q ss_pred HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCChhHHH
Q 010250 176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEYS 253 (514)
Q Consensus 176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 253 (514)
..++.++ ..++.|++.+++|++.........+.... .++.. +.|.
T Consensus 110 ~~~~~l~---------~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v------------~v~~~~~~~~~------------ 156 (433)
T PRK06855 110 AKIYGLL---------RREARVIGPSPAYSTHSSAEAAHAGYPPV------------TYRLDPENNWY------------ 156 (433)
T ss_pred HHHHHhc---------CCCCeEEEeCCCCchHHHHHHHhcCCeEE------------EEecccccCCC------------
Confidence 8887532 23578999999999864221111111100 00100 0010
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCC
Q 010250 254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKP 333 (514)
Q Consensus 254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~p 333 (514)
.++++|++++... ++..+++++.|. +.+|. ..+++.+++|.++|++||+++|.||+|..+-..+..+. ....+.+
T Consensus 157 -~d~~~l~~~~~~~-~~~~~i~l~~P~-NPTG~-~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~-sl~~~~~ 231 (433)
T PRK06855 157 -PDLDDLENKVKYN-PSIAGILLINPD-NPTGA-VYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTV-PLSEVIG 231 (433)
T ss_pred -CCHHHHHHHHhcC-CCceEEEEECCC-CCCCc-CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCC-CHHHHcC
Confidence 1247788777421 233556777775 45554 44678999999999999999999999998844443211 1111112
Q ss_pred c---h--hchhhhhcCCcccceeEEeC-----H---HHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH--hh-
Q 010250 334 D---L--VSFAKALSSAYMPIGAILVS-----P---EVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY--KE- 397 (514)
Q Consensus 334 D---i--v~~sK~l~gG~~pig~v~~~-----~---~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~--~~- 397 (514)
| + -+|||.++..++++|++++. + .+++.+.. ......+.+.+++.++.++++.- ++
T Consensus 232 ~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~Q~a~~~~l~~~~~~~~ 303 (433)
T PRK06855 232 DVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYINSILN--------AKMIEVCSTTLPQMAIPRIMSHPEYKNY 303 (433)
T ss_pred cCCeEEEecCccccCCCcceEEEEEEeCCchhhHHHHHHHHHHH--------hhccccCCChHHHHHHHHhhcCCcHHHH
Confidence 2 2 36899886333999999972 2 23333321 01123345667777777766421 10
Q ss_pred -ccHHHHHHHHHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCC-C--CCCCCC--cc-----------chHHHHH
Q 010250 398 -RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKS-P--NEPFPP--EW-----------GIGAYFG 459 (514)
Q Consensus 398 -~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~-~--~~~~~~--~~-----------~~~~~~~ 459 (514)
++..+.++++.+.+.+.|+++ +.....+.. |.++++.+++... . ...+.. .. .....++
T Consensus 304 ~~~~~~~~~~r~~~~~~~L~~~---~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (433)
T PRK06855 304 LKERNKRYEKRSNIAYEKLKDV---PGLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFV 380 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC---CCeeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHH
Confidence 123455666666677766554 222222333 4677787764210 0 000000 00 0022344
Q ss_pred -HHHHHCCcEEEeeC------CEEEEeCCCC-CCHHHHHHHHHHHHHHHHH
Q 010250 460 -AQCEKHGMLVRVSG------DNIMMSPPFI-MSPEEVDELISKYGKALKA 502 (514)
Q Consensus 460 -~~l~~~Gv~~~~~g------~~iRi~p~~~-~t~e~id~~~~~l~~~l~~ 502 (514)
..+.+.||.+.|+. +.+||+ +. .++++|++++++|.+++++
T Consensus 381 ~~l~~~~gV~v~PG~~F~~~~~~~Rls--~~~~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 381 YYLLASTGICVVPLSSFCTELNGFRVT--LLERDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred HHHHHHcCEEEecCCcCCCCCCceEEE--ECCCcHHHHHHHHHHHHHHHHH
Confidence 45678899998752 359999 45 5899999999999999865
No 217
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.78 E-value=1.9e-16 Score=164.39 Aligned_cols=346 Identities=14% Similarity=0.102 Sum_probs=202.5
Q ss_pred CCCEEEEccCCcccc-cCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-----CCCCeEEEeCCh
Q 010250 98 NGKKYLDSLAGLWCT-ALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-----SKMAKVFFTNSG 171 (514)
Q Consensus 98 dG~~ylD~~s~~~~~-~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-----~~~~~v~~~~sG 171 (514)
.|..++|+..|.... +.=..++.+.+++.+.+...... .+ .+.....++.+.+++++.. ...+++++++||
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~--~Y-~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~ 105 (403)
T TIGR01265 29 PEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFN--GY-APSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGC 105 (403)
T ss_pred cCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCC--CC-CCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCh
Confidence 477899998775421 11124688999998887642211 01 1223334566666666532 145789999999
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhH
Q 010250 172 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE 251 (514)
Q Consensus 172 seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (514)
++|+..+++... ..+++|++.+++|.+........ |... ..++.+.. +.
T Consensus 106 t~al~~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~-g~~~------------~~~~~~~~----------~~ 154 (403)
T TIGR01265 106 SQAIEICIEALA--------NPGANILVPRPGFPLYDTRAAFS-GLEV------------RLYDLLPE----------KD 154 (403)
T ss_pred HHHHHHHHHHhC--------CCCCEEEEeCCCchhHHHHHHHc-CCEE------------EEecCCcc----------cC
Confidence 999999998763 23467999999886543222111 1100 00111000 00
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eecccC
Q 010250 252 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYS 330 (514)
Q Consensus 252 ~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~g 330 (514)
+ ..+.+++++++. ++....+++.| ++..|.+ .+.+.+++|.++|+++|+++|+||+|..|...+..+ ....+.
T Consensus 155 ~-~~d~~~l~~~~~---~~~~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 228 (403)
T TIGR01265 155 W-EIDLDGLEALAD---EKTVAIVVINP-SNPCGSV-FSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFA 228 (403)
T ss_pred C-ccCHHHHHHHhC---cCccEEEEecC-CCCCCCC-CCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhc
Confidence 0 011466666553 23344555555 5556654 455778999999999999999999999885444321 111111
Q ss_pred CCCchh---chhhhhcCCcccceeEEeC-H-H-----HHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh---
Q 010250 331 IKPDLV---SFAKALSSAYMPIGAILVS-P-E-----VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--- 397 (514)
Q Consensus 331 v~pDiv---~~sK~l~gG~~pig~v~~~-~-~-----i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--- 397 (514)
-.+.++ +|||.++..++++|++++. + + +.+.+.. ....+++.+.+++.++.++|+...+
T Consensus 229 ~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 300 (403)
T TIGR01265 229 SIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKN--------LLQRILGPATIVQGALPDILENTPQEFF 300 (403)
T ss_pred cCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHHHHHHH--------HhhhhcCCChHHHHHHHHHHHhChHHHH
Confidence 112233 6899865544999999884 2 2 3333331 1112345677777777777753111
Q ss_pred ccHHHHHHHHHHHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH-HHCCcEEEee---
Q 010250 398 RNIVEQVNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVS--- 472 (514)
Q Consensus 398 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~--- 472 (514)
++..++++++.+.+.+.|+.+ +.+..+ ..-|.+++++++...... .. ....+...+ .++||.+.++
T Consensus 301 ~~~~~~~~~~~~~l~~~L~~~---~~~~~~~p~~g~f~~~~~~~~~~~~-----~~-~~~~~~~~l~~~~gv~v~pg~~f 371 (403)
T TIGR01265 301 DGKISVLKSNAELCYEELKDI---PGLVCPKPEGAMYLMVKLELELFPE-----IK-DDVDFCEKLVREESVICLPGSAF 371 (403)
T ss_pred HHHHHHHHHHHHHHHHHHhcC---CCceecCCCceeEEEEeccccccCC-----CC-CHHHHHHHHHHhCCEEEeCcccc
Confidence 234555666666777777654 222212 334677888876431100 00 133465664 5789999875
Q ss_pred --CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 473 --GDNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 473 --g~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
.+.||++ +..+++++++++++|.+.+++
T Consensus 372 ~~~~~iRis--~~~~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 372 GLPNWVRIT--ITVPESMLEEACSRIKEFCER 401 (403)
T ss_pred CCCCeEEEE--ecCCHHHHHHHHHHHHHHHHh
Confidence 2579999 667789999999999888754
No 218
>PRK08354 putative aminotransferase; Provisional
Probab=99.77 E-value=2.4e-16 Score=157.83 Aligned_cols=295 Identities=18% Similarity=0.200 Sum_probs=180.9
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT 177 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~ 177 (514)
+...+|||..|. ++++ +|.+.+++.+.+.....| + ....+.+.+++.++ +++++++|++||+..
T Consensus 6 ~~~~~i~l~~~~--np~~--p~~~~~a~~~~~~~~~~y------p--~~~~l~~~ia~~~~----~~I~vt~G~~~al~~ 69 (311)
T PRK08354 6 REEGLIDFSASV--NPYP--PEWLDEMFERAKEISGRY------T--YYEWLEEEFSKLFG----EPIVITAGITEALYL 69 (311)
T ss_pred CccceeEecCCC--CCCC--CHHHHHHHHHHHHHhhcC------C--ChHHHHHHHHHHHC----CCEEECCCHHHHHHH
Confidence 345689998763 5554 688999998776543211 1 23567888888863 479999999999987
Q ss_pred HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
++.++ .+++.|++.+++|.+........+.... . .+. +.
T Consensus 70 ~~~~~---------~~gd~vlv~~P~y~~~~~~~~~~g~~~~-~--------------~~~-----------------d~ 108 (311)
T PRK08354 70 IGILA---------LRDRKVIIPRHTYGEYERVARFFAARII-K--------------GPN-----------------DP 108 (311)
T ss_pred HHHhh---------CCCCeEEEeCCCcHHHHHHHHHcCCEEe-e--------------cCC-----------------CH
Confidence 76433 2356899999999887543333222110 0 000 13
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh-
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV- 336 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv- 336 (514)
+.+++.+. +....+++.|. +.+|.+ .+.+.+++|.++|++||+++|+||++.+|...+.. .. .+.++
T Consensus 109 ~~l~~~~~----~~~~vi~~~P~-NPTG~~-~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~--~~----~~~vi~ 176 (311)
T PRK08354 109 EKLEELVE----RNSVVFFCNPN-NPDGKF-YNFKELKPLLDAVEDRNALLILDEAFIDFVKKPES--PE----GENIIK 176 (311)
T ss_pred HHHHHhhc----CCCEEEEecCC-CCCCCc-cCHHHHHHHHHHhhhcCcEEEEeCcchhccccccc--cC----CCcEEE
Confidence 56666553 23357778885 556654 46688999999999999999999999988433211 11 12222
Q ss_pred --chhhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Q 010250 337 --SFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQD 413 (514)
Q Consensus 337 --~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~ 413 (514)
+|||.++ .| +++|++++ +.+.+... . ..+..+.++.+++.+.++ +. .++++++.+.+++
T Consensus 177 ~~S~SK~~~l~G-lRiG~~v~---~~~~l~~~-------~--~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~ 238 (311)
T PRK08354 177 LRTFTKSYGLPG-IRVGYVKG---FEEAFRSV-------R--MPWSIGSTGYAFLEFLIE----DD-FEHLRKTMPLIWR 238 (311)
T ss_pred EeccHhhcCCcc-ceeeeeee---hHHHHHHc-------C--CCccCCHHHHHHHHHHHH----hH-HHHHHHHHHHHHH
Confidence 6899887 45 89999998 44555421 1 233444555444444333 11 2334444444444
Q ss_pred hhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-----CEEEEeCCCCCCHHH
Q 010250 414 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----DNIMMSPPFIMSPEE 488 (514)
Q Consensus 414 ~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-----~~iRi~p~~~~t~e~ 488 (514)
..+.+.... ...+.|.++.+++.+ ...+.+.|.++||.+.++. +.|||+ ..++++
T Consensus 239 ~~~~l~~~l---~~~~~~~~~~~~~~~--------------~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~---~~~~~~ 298 (311)
T PRK08354 239 EKERFEKAL---YVKSDANFFIKDVGD--------------AEKFVEFLKRNGILVRDCTSFGLPGYIRFS---VRDREE 298 (311)
T ss_pred HHHHHHHhc---CCCCCCcEEEEECCC--------------HHHHHHHHHHCCeEEEecccCCCCCeEEEE---eCCHHH
Confidence 444331111 112445555554321 2457788999999999763 579999 456667
Q ss_pred HHHHHHHHHHH
Q 010250 489 VDELISKYGKA 499 (514)
Q Consensus 489 id~~~~~l~~~ 499 (514)
.+++++.|++.
T Consensus 299 ~~~l~~al~~~ 309 (311)
T PRK08354 299 NEKLIRALREW 309 (311)
T ss_pred HHHHHHHHHHh
Confidence 77777777653
No 219
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.77 E-value=4.7e-16 Score=160.97 Aligned_cols=337 Identities=14% Similarity=0.110 Sum_probs=195.7
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-----cCCCCeEEEeCChhHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-----ASKMAKVFFTNSGSEA 174 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-----~~~~~~v~~~~sGseA 174 (514)
...+||..|... + ..++.+.+++.+.++........+ .+.....++.+.+++++. ..+.++++++++++++
T Consensus 33 ~~~~~l~~g~p~--~-~~~~~v~~a~~~~~~~~~~~~~~y-~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~a 108 (394)
T PRK06836 33 DNVFDFSLGNPS--V-PPPAAVKEALRELAEEEDPGLHGY-MPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGA 108 (394)
T ss_pred CCeEEecCcCCC--C-CCCHHHHHHHHHHHhcCCcCcccC-CCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHH
Confidence 457888776321 2 246788888877765321100001 112223344444444432 2346789999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250 175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254 (514)
Q Consensus 175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
+..+++... ..++.|++.+++|.++...... .|... ..++..+. .+ .
T Consensus 109 l~~~~~~l~--------~~gd~Vli~~p~~~~~~~~~~~-~g~~v------------~~v~~~~~-----------~~-~ 155 (394)
T PRK06836 109 LNVALKAIL--------NPGDEVIVFAPYFVEYRFYVDN-HGGKL------------VVVPTDTD-----------TF-Q 155 (394)
T ss_pred HHHHHHHhc--------CCCCEEEEcCCCCccHHHHHHH-cCCEE------------EEEecCCc-----------cC-c
Confidence 998887653 2346799999988876432211 11111 11111100 00 0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh------cCCEEEEechhcCcccccccceecc
Q 010250 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK------YDILFIADEVICAFGRLGTMFGCDK 328 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~------~gillI~DEv~tG~gr~G~~~~~~~ 328 (514)
.+++++++++. +++.+|++...++.+|.+. +.+.+++|.++|++ ||+++|+||++..|-..|.... ..
T Consensus 156 ~d~~~l~~~~~----~~~~~v~~~~p~NPtG~~~-~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~-~~ 229 (394)
T PRK06836 156 PDLDALEAAIT----PKTKAVIINSPNNPTGVVY-SEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVP-YI 229 (394)
T ss_pred CCHHHHHhhcC----cCceEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCC-Ch
Confidence 12467777664 2455566555567777655 45788999999999 8999999999987743332111 00
Q ss_pred cCCCCchh---chhhhhcCCcccceeEEeCHHHHHH---hhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHH
Q 010250 329 YSIKPDLV---SFAKALSSAYMPIGAILVSPEVSEV---IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVE 402 (514)
Q Consensus 329 ~gv~pDiv---~~sK~l~gG~~pig~v~~~~~i~~~---l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~ 402 (514)
....++++ +|||.++..++++|++++++++.+. +.... ........+..+++.+.++...++ +....+
T Consensus 230 ~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~ 303 (394)
T PRK06836 230 FKYYDNSIVVYSFSKSLSLPGERIGYIAVNPEMEDADDLVAALV---FANRILGFVNAPALMQRVVAKCLD---ATVDVS 303 (394)
T ss_pred HHccCcEEEEecchhhccCcceeeEEEecCHHHhhhHHHHHHHH---HHhhccccccCCHHHHHHHHHHhC---ChHHHH
Confidence 11112333 5899998433899999998876432 11100 000001123455666665554443 222345
Q ss_pred HHHHHHHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEE
Q 010250 403 QVNKIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNI 476 (514)
Q Consensus 403 ~~~~~~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~i 476 (514)
.++++.+.+.+.|++. .+ ..... -|.++++.++... ...+++.|.++||.+.++ ++++
T Consensus 304 ~~~~~r~~l~~~L~~~---g~-~~~~~~gg~~~~~~~~~~~------------~~~~~~~l~~~gv~v~~g~~f~~~~~i 367 (394)
T PRK06836 304 IYKRNRDLLYDGLTEL---GF-ECVKPQGAFYLFPKSPEED------------DVAFCEKAKKHNLLLVPGSGFGCPGYF 367 (394)
T ss_pred HHHHHHHHHHHHHHhC---CC-EeecCCceEEEEEeCCCCC------------HHHHHHHHHhCCEEEECchhcCCCCeE
Confidence 5666777777777664 22 11222 2556666554211 344668889999999876 3579
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 477 MMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 477 Ri~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
||+. ..+++++++++++|++++++.
T Consensus 368 Ri~~--~~~~~~~~~~i~~l~~~l~~~ 392 (394)
T PRK06836 368 RLSY--CVDTETIERSLPAFEKLAKEY 392 (394)
T ss_pred EEEe--cCCHHHHHHHHHHHHHHHHHh
Confidence 9994 579999999999999988653
No 220
>PLN02231 alanine transaminase
Probab=99.77 E-value=2e-16 Score=168.47 Aligned_cols=345 Identities=14% Similarity=0.136 Sum_probs=198.9
Q ss_pred CHHHHHHHHHHHhcCC----ccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCC
Q 010250 118 EPRLVAAATAQLNTLP----FYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRP 192 (514)
Q Consensus 118 ~p~v~~A~~~~l~~~~----~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~ 192 (514)
+.++++++.+.+.... ..++...+..+....+++.+.+..+ ....++|++++|+++|+..++++.. .+
T Consensus 142 p~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~-------~~ 214 (534)
T PLN02231 142 SADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI-------RS 214 (534)
T ss_pred CHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhc-------cC
Confidence 4466666666665421 1111112233334444444443321 2356899999999999999998763 12
Q ss_pred CccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC--C
Q 010250 193 NKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP--E 270 (514)
Q Consensus 193 ~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~--~ 270 (514)
.++.|++..++|.+........++..... + .+....|. .++++|++.+..... .
T Consensus 215 ~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~-------~----l~~~~~~~-------------~d~~~Le~~l~~~~~~~~ 270 (534)
T PLN02231 215 EKDGILCPIPQYPLYSASIALHGGTLVPY-------Y----LDEATGWG-------------LEISELKKQLEDARSKGI 270 (534)
T ss_pred CCCEEEEeCCCChhHHHHHHHcCCEEEEE-------e----cCcccCCC-------------CCHHHHHHHHHHHhhcCC
Confidence 35789999999988754333322221100 0 00000111 125777777754211 1
Q ss_pred cE-EEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc-cccc-eecc----cCC---CCchh---c
Q 010250 271 TI-AAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL-GTMF-GCDK----YSI---KPDLV---S 337 (514)
Q Consensus 271 ~~-aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~-G~~~-~~~~----~gv---~pDiv---~ 337 (514)
++ +.+++.| +|.+|. +.+++.+++|.++|++||+++|.||+|..+-.. +..+ .+.. .|. ...++ +
T Consensus 271 ~~k~ivl~nP-~NPTG~-vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S 348 (534)
T PLN02231 271 TVRALVVINP-GNPTGQ-VLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQS 348 (534)
T ss_pred CeEEEEEeCC-CCCCCc-CCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEec
Confidence 34 4566666 455564 446789999999999999999999999977442 3222 1110 111 11244 6
Q ss_pred hhhhhcC-CcccceeEEe---CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHH-------HH----hh-ccHH
Q 010250 338 FAKALSS-AYMPIGAILV---SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALK-------IY----KE-RNIV 401 (514)
Q Consensus 338 ~sK~l~g-G~~pig~v~~---~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~-------~~----~~-~~~~ 401 (514)
|||++.| .++++|++++ ++++++.+... ...+.+.+..+++++..+++ .+ ++ +++.
T Consensus 349 ~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~--------~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~ 420 (534)
T PLN02231 349 VSKGYYGECGKRGGYMEVTGFTSDVREQIYKV--------ASVNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGIL 420 (534)
T ss_pred cCcccccCCccceEEEEEecCCHHHHHHHHHH--------HhhhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHH
Confidence 8998743 2299999976 68888887631 11233445556666655552 11 11 2356
Q ss_pred HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEE-EEccCCCCCCCCC-CccchHHHHHHHHH-HCCcEEEeeC-----
Q 010250 402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGT-EFADNKSPNEPFP-PEWGIGAYFGAQCE-KHGMLVRVSG----- 473 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i-~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~Gv~~~~~g----- 473 (514)
+.++++.+.+.+.|+++ +.+......|.|+.+ .+.-......... ........++..++ +.||.+.|+.
T Consensus 421 ~~~~~r~~~l~~~L~~~---~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~ 497 (534)
T PLN02231 421 SSLARRAKTLEDALNSL---EGVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQV 497 (534)
T ss_pred HHHHHHHHHHHHHHhcC---CCceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCC
Confidence 77888888888888765 333334455555444 3321100000000 00001233555555 6799998752
Q ss_pred --C-EEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 010250 474 --D-NIMMSPPFIMSPEEVDELISKYGKALKATEERVK 508 (514)
Q Consensus 474 --~-~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~~ 508 (514)
. .+|++ +..++++|++++++|.+++++..++++
T Consensus 498 ~g~~~~Rit--~~~~~e~l~eal~RL~~~~~~~~~~~~ 533 (534)
T PLN02231 498 PGTWHFRCT--ILPQEDKIPAIVSRLTEFHKSFMDEFR 533 (534)
T ss_pred CCCCeEEEE--eCCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2 49999 678999999999999999988877654
No 221
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.77 E-value=7e-16 Score=161.49 Aligned_cols=338 Identities=14% Similarity=0.132 Sum_probs=191.6
Q ss_pred HHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEE
Q 010250 120 RLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIA 199 (514)
Q Consensus 120 ~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~ 199 (514)
.+.+++.+++......+ .......+|.+.+++++ +.+.+++++||++|+..++.... .++ + ||.
T Consensus 58 a~~~a~~~a~~~g~~~Y----~~~~g~~~Lreaia~~~---~~~~vv~t~ggt~A~~~~~~all-------~pG-D-Vii 121 (460)
T PRK13238 58 AMSDRQWAAMMRGDEAY----AGSRSYYRLEDAVKDIF---GYPYTIPTHQGRAAEQILFPVLI-------KKG-D-VVP 121 (460)
T ss_pred hhhHHHHHHHHhCCccc----CCCCCHHHHHHHHHHHh---CCCcEEECCCHHHHHHHHHHHhC-------CCC-C-EEc
Confidence 57788877775533221 13445678999999998 34679999999999999987652 233 3 777
Q ss_pred EecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcc
Q 010250 200 RQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEP 279 (514)
Q Consensus 200 ~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEp 279 (514)
.++.|..+.......++.+.... .. +.. .....+.|++ ..++++|++.+...+++++++|+++.
T Consensus 122 ~~p~~~~~~~~i~~~G~~~v~v~-~~---~~~-~~~~~~~f~g-----------~id~e~Le~~i~~~~~~~tk~Ivl~~ 185 (460)
T PRK13238 122 SNYHFDTTRAHIELNGATAVDLV-ID---EAL-DTGSRHPFKG-----------NFDLEKLEALIEEVGAENVPFIVMTI 185 (460)
T ss_pred cCCcccchHHHHHHcCCEEEEEe-cc---ccc-cccccccccC-----------CcCHHHHHHHHhhcCCCceeEEEEec
Confidence 77766544322222222221100 00 000 0000001111 12368899988765545688888887
Q ss_pred ccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC----cccc---cccc-eec-c---cCCCCchhchh-hhhcCCc
Q 010250 280 VIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA----FGRL---GTMF-GCD-K---YSIKPDLVSFA-KALSSAY 346 (514)
Q Consensus 280 v~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG----~gr~---G~~~-~~~-~---~gv~pDiv~~s-K~l~gG~ 346 (514)
.+|.+|..+.+.+.|++|+++|++||++||.|+++.. |+.. |... ... . .+--.|.+++| |.. |+
T Consensus 186 p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~--g~ 263 (460)
T PRK13238 186 TNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKD--AM 263 (460)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccC--CC
Confidence 7776654556688899999999999999999997741 1100 1000 000 0 00114555554 111 22
Q ss_pred ccceeEEe-C-HHHHHHhhhccCCCCcccccC-CCCCcHHHHHHHHH-HHHHHhhccHHHHHHHHHHHHHhhhhhccCCC
Q 010250 347 MPIGAILV-S-PEVSEVIHSQSNTLGSFSHGF-TYSGHPVSCAVAIE-ALKIYKERNIVEQVNKIAPKFQDGVKAFSDSP 422 (514)
Q Consensus 347 ~pig~v~~-~-~~i~~~l~~~~~~~~~~~~~~-t~~~~pl~~aaa~a-al~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~ 422 (514)
.|.|++++ + +++++.++.. ....++. ||++.+..+.+|++ +|+...+++..+...++.++|.+.|++. +.+
T Consensus 264 ~~~GG~i~~~d~~l~~~~~~~----~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~~~~~~~l~~~L~~~-G~~ 338 (460)
T PRK13238 264 VNIGGLLCFRDEDLFTECRTL----CILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYRIGQVEYLGEGLEEA-GVP 338 (460)
T ss_pred CcceeEEEcChHHHHHHhhhc----ccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHHHHHHHHHHHHHHHC-CCC
Confidence 34455554 5 5777777531 1122444 88887666454544 5554434455555555678899999875 556
Q ss_pred ceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHH-HHHCCcEEEeeC------------------CEEEEeCCC-
Q 010250 423 IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQ-CEKHGMLVRVSG------------------DNIMMSPPF- 482 (514)
Q Consensus 423 ~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~~~~~g------------------~~iRi~p~~- 482 (514)
++... -|.++.+++..-.. . .+...-....++.. +.+.||.+.+.+ +.+||+.|-
T Consensus 339 ~~~p~--Gg~~v~~d~~~~~~-~--~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr 413 (460)
T PRK13238 339 IQTPA--GGHAVFVDAGKFLP-H--IPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRR 413 (460)
T ss_pred eEccC--CceEEEEEchhcCC-C--CCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccc
Confidence 55432 23444455432110 0 00000012334544 457788886532 459999774
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q 010250 483 IMSPEEVDELISKYGKALK 501 (514)
Q Consensus 483 ~~t~e~id~~~~~l~~~l~ 501 (514)
.-|.++++.+.++|.+..+
T Consensus 414 ~~~~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 414 VYTQSHMDYVAEALKAVKE 432 (460)
T ss_pred cCCHHHHHHHHHHHHHHHH
Confidence 4499999999999988663
No 222
>PLN02672 methionine S-methyltransferase
Probab=99.77 E-value=3.4e-16 Score=174.40 Aligned_cols=353 Identities=11% Similarity=0.070 Sum_probs=212.4
Q ss_pred EEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC-C-CCeEEEeCC
Q 010250 93 YVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS-K-MAKVFFTNS 170 (514)
Q Consensus 93 ~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~-~-~~~v~~~~s 170 (514)
++.+.+|..+|++..|- +.++ .+|.|.+++.+.+.....+ .+..+....+++++.+.++-. + .++++++++
T Consensus 690 ~~~~~~g~~vI~LsinE--~d~p-pPp~V~eAi~eal~~~~~s----~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~G 762 (1082)
T PLN02672 690 SVSGSQESSLIHMDVDE--SFLP-VPSAVKASIFESFVRQNIS----ESETDPRPSILQFIKSNYGFPTDSCTEFVYGDT 762 (1082)
T ss_pred CCcccCCCCEEEEeCCC--CCCC-CCHHHHHHHHHHHhhcCCC----CCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCC
Confidence 45666788899987763 4455 6889999999887653221 123455678888888875321 1 247999998
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCC
Q 010250 171 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGET 248 (514)
Q Consensus 171 GseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 248 (514)
..+++..++.... ..++.|++..++|......+...+.... .++.. +.|+
T Consensus 763 s~elL~lll~aLl--------~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv-------------~Vpl~~e~gf~------- 814 (1082)
T PLN02672 763 SLALFNKLVLCCV--------QEGGTLCFPAGSNGTYVSAAKFLKANFR-------------RIPTKSSDGFK------- 814 (1082)
T ss_pred HHHHHHHHHHHHc--------CCCCEEEEeCCChHHHHHHHHHcCCEEE-------------EEecccccCCC-------
Confidence 8888888877653 3457899999999887544333222111 11110 0111
Q ss_pred hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc---e
Q 010250 249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF---G 325 (514)
Q Consensus 249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~---~ 325 (514)
.+.+++++++... ....++++.|.+|++|.+ .+++.+++|.++|++||+++|+||+|.++-..+... .
T Consensus 815 ------lD~d~Le~al~~~--~~~~I~L~nPnhNPTG~v-~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~s 885 (1082)
T PLN02672 815 ------LTAKTLASTLETV--KKPWVYISGPTINPTGLL-YSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWD 885 (1082)
T ss_pred ------CCHHHHHHHhccC--CCCEEEEECcCCCCcCcc-CCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccc
Confidence 1146677766421 234678888875666754 477999999999999999999999999775544321 1
Q ss_pred ec----cc-CCCC--chh---chhhhhcCCcccceeEEeC-HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH
Q 010250 326 CD----KY-SIKP--DLV---SFAKALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI 394 (514)
Q Consensus 326 ~~----~~-gv~p--Div---~~sK~l~gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~ 394 (514)
.. .+ ...+ .++ +|||.++.+++++|+++++ +++++.+.... .....+..+.+++++++++++.
T Consensus 886 l~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~~~~------~~s~~~~~~q~Aaaaalall~~ 959 (1082)
T PLN02672 886 LKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAFHSAP------GLSRPHSTLKYTIKKLLGLKNQ 959 (1082)
T ss_pred hhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHHHhh------hhcCCCcHHHHHHHHHHHHHhc
Confidence 10 11 1112 222 6899776655999999996 45888886310 0111122234444444443320
Q ss_pred ----Hhh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeee-eeEEEEEccCCC--CCCCCCC---c-cchHHHHHHH
Q 010250 395 ----YKE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTG-LILGTEFADNKS--PNEPFPP---E-WGIGAYFGAQ 461 (514)
Q Consensus 395 ----~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g-~~~~i~~~~~~~--~~~~~~~---~-~~~~~~~~~~ 461 (514)
..+ .+..+.++++.+++.+.|++. ++ ...++.| .++++.+..... .+...+. . ......+++.
T Consensus 960 ~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~---Gi-~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~ 1035 (1082)
T PLN02672 960 KSSDLLDGVAEQKKILKSRAERLKETLEAC---GW-DVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREA 1035 (1082)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHC---CC-eEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHH
Confidence 000 123455777777888887764 22 2233444 445554421100 0000000 0 0114568888
Q ss_pred HHHC-CcEEEee-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 462 CEKH-GMLVRVS-----GDNIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 462 l~~~-Gv~~~~~-----g~~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
|+++ ||.+.++ .+.+||+ +..+++++++++++|++.++
T Consensus 1036 LLee~GVaV~PGs~FG~~g~~RIs--fa~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1036 ILKSTGLCINSSSWTGIPGYCRFS--FALEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred HHHcCCEEEecCcccCCCCeEEEE--ecCCHHHHHHHHHHHHHHHH
Confidence 8865 9999875 2569999 67789999999999998654
No 223
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.76 E-value=1.9e-16 Score=162.57 Aligned_cols=322 Identities=14% Similarity=0.124 Sum_probs=194.5
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ 178 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A 178 (514)
+..++||..|. +++| .+|.+.+++.+.......| . ...-.++.+.++++++ .+.+++++++|+++++..+
T Consensus 35 ~~~~i~l~~~~--~~~~-~~~~~~~al~~~~~~~~~Y----~--~~~g~~lr~~ia~~~~-~~~~~i~~t~G~~~~l~~~ 104 (371)
T PRK05166 35 VPRIAKLGSNE--NPLG-PSPAVRRAFADIAELLRLY----P--DPQGRALREAIAARTG-VPADRIILGNGSEDLIAVI 104 (371)
T ss_pred CcceEEcCCCC--CCCC-CCHHHHHHHHHHHHHhhcC----C--CCcHHHHHHHHHHHhC-cCHHHEEEcCCHHHHHHHH
Confidence 44789998774 4566 5788998887754433222 1 1111368888888874 3557899999999999888
Q ss_pred HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250 179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258 (514)
Q Consensus 179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (514)
+.... ..++.|++.+++|.+....... .|... ..++....+. .+.+
T Consensus 105 ~~~~~--------~~gd~vli~~P~y~~~~~~~~~-~g~~~------------~~v~~~~~~~-------------~~~~ 150 (371)
T PRK05166 105 CRAVL--------RPGDRVVTLYPSFPLHEDYPTM-MGARV------------ERVTVTPDLG-------------FDLD 150 (371)
T ss_pred HHHhc--------CCCCEEEEcCCChHHHHHHHHH-cCCeE------------EEeecCCCCC-------------CCHH
Confidence 87653 3356788999999765322111 11111 0011100000 1146
Q ss_pred HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-ceeccc-CCCCchh
Q 010250 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGCDKY-SIKPDLV 336 (514)
Q Consensus 259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~~~~-gv~pDiv 336 (514)
++++.+.. .....++..| ++.+|.+. +.+.+++|.++|++ ++++|+||++..|-..+.. ...... ...+.++
T Consensus 151 ~l~~~~~~---~~~~v~l~~p-~NPtG~~~-~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi 224 (371)
T PRK05166 151 ALCAAVAR---APRMLMFSNP-SNPVGSWL-TADQLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWI 224 (371)
T ss_pred HHHHhhhc---CCCEEEEeCC-CCCCCCCC-CHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEE
Confidence 67666642 2223444455 55567655 45677777777764 8999999999877422211 111111 1122333
Q ss_pred ---chhhhhc-CCcccceeEEe-CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHH
Q 010250 337 ---SFAKALS-SAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPK 410 (514)
Q Consensus 337 ---~~sK~l~-gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~ 410 (514)
+|||.++ .| +++|++++ ++++++.+... . ..++.+.++..++.+++..-+ -++..+.++++.+.
T Consensus 225 ~i~SfSK~~~l~G-lRiG~~i~~~~~l~~~~~~~-------~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~ 294 (371)
T PRK05166 225 VLRTFSKAYGLAG-LRVGYGLVSDPELVGLLDRV-------R--TPFNVNGAAQAAALAALDDEEHLAKGVALALAERER 294 (371)
T ss_pred EEeechHhhhcch-hheeeeecCCHHHHHHHHHh-------c--cCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 6899887 45 89999775 68888887631 1 245567777777777764211 12334556666777
Q ss_pred HHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCCC
Q 010250 411 FQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMS 485 (514)
Q Consensus 411 l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~t 485 (514)
+.+.|++. ++ ......|.++++.+... ...+.+.|.++||.+.++ .+.||++ ..+
T Consensus 295 l~~~L~~~---g~-~~~p~~g~fl~~~~~~~-------------~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~---~~~ 354 (371)
T PRK05166 295 LKKELAEM---GY-RIAPSRANFLFFDARRP-------------ASAVAEALLRQGVIVKPWKQPGFETFIRVS---IGS 354 (371)
T ss_pred HHHHHHHC---cC-eeCCCcCCEEEEeCCCC-------------HHHHHHHHHHCCeEEecCCCCCCCCeEEEE---cCC
Confidence 77777765 22 12344577777664311 345788999999999875 2469999 346
Q ss_pred HHHHHHHHHHHHHHH
Q 010250 486 PEEVDELISKYGKAL 500 (514)
Q Consensus 486 ~e~id~~~~~l~~~l 500 (514)
+++.+++++.|++.+
T Consensus 355 ~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 355 PEENDHFVAALDKVL 369 (371)
T ss_pred HHHHHHHHHHHHHHh
Confidence 777888888777654
No 224
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.76 E-value=2.7e-16 Score=160.86 Aligned_cols=322 Identities=14% Similarity=0.160 Sum_probs=192.2
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV 179 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al 179 (514)
..++||..+. ++++ .+|.+.+++.+.+.....| +.....+|.+.|++++ ..+.++|++++|++|++..++
T Consensus 22 ~~~i~l~~~~--n~~~-~~~~~~~a~~~~~~~~~~Y------~~~~~~~Lr~aia~~~-~v~~~~I~it~G~~~~i~~~~ 91 (360)
T PRK07392 22 DAILDFSASI--NPLG-PPESVIAAIQSALSALRHY------PDPDYRELRLALAQHH-QLPPEWILPGNGAAELLTWAG 91 (360)
T ss_pred ccEEEeCCcC--CCCC-CCHHHHHHHHHHHHHhhcC------CCcCHHHHHHHHHHHh-CcChhhEEECCCHHHHHHHHH
Confidence 3678987553 5566 6789999988877643222 1112357778888877 346689999999999999888
Q ss_pred HHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250 180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259 (514)
Q Consensus 180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (514)
+... + .+.|++.+++|.+........+.. .. .++..... ..+ .+..+
T Consensus 92 ~~l~--------~-g~~vlv~~P~y~~~~~~~~~~g~~-~~------------~v~~~~~~--~~~---------~~~~~ 138 (360)
T PRK07392 92 RELA--------Q-LRAVYLITPAFGDYRRALRAFGAT-VK------------ELPLPLDQ--PSP---------GLTLR 138 (360)
T ss_pred HHhC--------C-CCeEEEECCCcHHHHHHHHHcCCe-EE------------EEeccccc--CCc---------ccccC
Confidence 7542 3 358999999998875433332211 10 00100000 000 00122
Q ss_pred HHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-ecccCCCCchh--
Q 010250 260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYSIKPDLV-- 336 (514)
Q Consensus 260 le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~~gv~pDiv-- 336 (514)
++++.... ......+++.| ++.+|.+.+ .++|.++++++++ +|+||+|..|...+.... .....-.+.++
T Consensus 139 ~~~~~~~~-~~~~~~~l~nP-~NPTG~~~~----~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i 211 (360)
T PRK07392 139 LQTLPPQL-TPNDGLLLNNP-HNPTGKLWS----REAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIIL 211 (360)
T ss_pred HHHHHHhc-cCCCEEEEeCC-CCCCCCCcC----HHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEE
Confidence 33333222 23445566666 566666665 4678888999985 666999998854442111 11112123333
Q ss_pred -chhhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Q 010250 337 -SFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQD 413 (514)
Q Consensus 337 -~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~ 413 (514)
+|||.++ .| +++|++++++++++.+... . ..++.+.+++.++.++|+.-. .+...+.++++.+++.+
T Consensus 212 ~S~SK~~~l~G-lRiG~~v~~~~~~~~~~~~-------~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~ 281 (360)
T PRK07392 212 RSLTKFYSLPG-LRLGYAIAHPDRLQRWQQW-------R--DPWPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQ 281 (360)
T ss_pred EechhhhcCCc-hheeeeeCCHHHHHHHHhh-------C--CCCCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 6899888 55 8999999999998887631 1 246677888888888775311 11234456666777777
Q ss_pred hhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH-HHCCcEEEeeC-------CEEEEeCCCCCC
Q 010250 414 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVSG-------DNIMMSPPFIMS 485 (514)
Q Consensus 414 ~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~g-------~~iRi~p~~~~t 485 (514)
.|+.+ +.+....+.|.++.+++... ...+...+ .++||.+.++. +.|||+ ..+
T Consensus 282 ~L~~~---~~~~~~~~~~~fl~~~~~~~-------------~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~---~~~ 342 (360)
T PRK07392 282 GLASL---PGLTPLPSAANFLLVQSQGS-------------ALQLQEKLLQQHRILIRDCLSFPELGDRYFRVA---VRT 342 (360)
T ss_pred HHHhC---CCcEECCCCCCEEEEEcCCC-------------HHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEE---eCC
Confidence 77654 22222234466666665321 23466665 56799998751 479999 334
Q ss_pred HHHHHHHHHHHHHHH
Q 010250 486 PEEVDELISKYGKAL 500 (514)
Q Consensus 486 ~e~id~~~~~l~~~l 500 (514)
.++.+++.+.|++.+
T Consensus 343 ~~~~~~l~~al~~~~ 357 (360)
T PRK07392 343 EAENQRLLEALAAIL 357 (360)
T ss_pred HHHHHHHHHHHHHHh
Confidence 455566666555443
No 225
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.76 E-value=2.3e-16 Score=159.79 Aligned_cols=309 Identities=17% Similarity=0.226 Sum_probs=188.0
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT 177 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~ 177 (514)
.|..++||..|. ++++ .+|.+.+++.+.+...... ..+.....++.+.+++++. .+.+++++++++++++..
T Consensus 16 ~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~----~Y~~~g~~~lr~~ia~~~~-~~~~~I~~t~G~~~~l~~ 87 (337)
T PRK03967 16 EGNYRIWLDKNE--NPFD-LPEELKEEIFEELKRVPFN----RYPHITSDPLREAIAEFYG-LDAENIAVGNGSDELISY 87 (337)
T ss_pred CCCceEEecCCC--CCCC-CCHHHHHHHHHHhhcCccc----cCCCCCHHHHHHHHHHHhC-cCcceEEEcCCHHHHHHH
Confidence 455678887664 4554 5688999998887542111 1122334678888888874 456899999999999987
Q ss_pred HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
+++.. + ++.|++.+++|........ ..|.+. ..++....|. .+.
T Consensus 88 ~~~~~---------~-gd~V~v~~P~y~~~~~~~~-~~g~~~------------~~v~~~~~~~-------------~d~ 131 (337)
T PRK03967 88 LVKLF---------E-GKHIVITPPTFGMYSFYAK-LNGIPV------------IDVPLKEDFT-------------IDG 131 (337)
T ss_pred HHHHh---------C-CCeEEEeCCChHHHHHHHH-HcCCeE------------EEeecCCCCC-------------cCH
Confidence 66542 2 4689999999975432211 112111 0111110011 113
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh-
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV- 336 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv- 336 (514)
+++++.+ ++....+++.| ++.+|.+.+ .++|.++++ +++++|+||+|..|.. .... ......++++
T Consensus 132 ~~l~~~~----~~~~~v~~~~P-~NPtG~~~~----~~~l~~i~~-~~~~ii~De~y~~~~~-~~~~--~~~~~~~~vi~ 198 (337)
T PRK03967 132 ERIAEKA----KNASAVFICSP-NNPTGNLQP----EEEILKVLE-TGKPVVLDEAYAEFSG-KSLI--GLIDEYPNLIL 198 (337)
T ss_pred HHHHHhc----cCCCEEEEeCC-CCCCCCCCC----HHHHHHHHh-cCCEEEEECchhhhcc-cchH--HHHhhCCCEEE
Confidence 4555433 12334555666 666676665 467777774 7999999999987731 1111 1111123443
Q ss_pred --chhhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHH
Q 010250 337 --SFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQ 412 (514)
Q Consensus 337 --~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~~~~l~ 412 (514)
+|||.++ .| +++|++++++++++.+... ...++.+.++..++.++|+..+. .+......+.++.+.
T Consensus 199 l~S~SK~~~l~G-lRiG~iv~~~~~i~~~~~~---------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~ 268 (337)
T PRK03967 199 LRTFSKAFGLAG-IRAGYAIANEEIIDALYRI---------KPPFSLNILTMKIVRLALDHYDLIEERIDYIIKERERVR 268 (337)
T ss_pred EecchHhhcchh-hhheeeecCHHHHHHHHhh---------cCCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 6899988 45 8999999999999888742 12345677788888777753211 122334455555666
Q ss_pred hhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC----CEEEEeCCCCCCHHH
Q 010250 413 DGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG----DNIMMSPPFIMSPEE 488 (514)
Q Consensus 413 ~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g----~~iRi~p~~~~t~e~ 488 (514)
+.|.+. . ....|.++++.+. +.+.|.++||.+++.+ +.+||+ ..+.++
T Consensus 269 ~~L~~~---~----~~~~~~~~~~~~~------------------~~~~l~~~gi~v~~~~~~~~~~~Ri~---~~~~~~ 320 (337)
T PRK03967 269 RELGEY---A----YPSDANFLLLKLD------------------AYDYLLENGIVVRKLSGRLEGHIRVT---VGKREE 320 (337)
T ss_pred HHhccC---c----CCCCCcEEEEhHH------------------HHHHHHHCCEEEEeCCCCCCCeEEEe---cCCHHH
Confidence 666543 1 1234555555431 4578889999997542 469999 457788
Q ss_pred HHHHHHHHHHHHH
Q 010250 489 VDELISKYGKALK 501 (514)
Q Consensus 489 id~~~~~l~~~l~ 501 (514)
.+++++.|++..+
T Consensus 321 ~~~l~~~l~~~~~ 333 (337)
T PRK03967 321 NDEFIKALKEIKE 333 (337)
T ss_pred HHHHHHHHHHHHH
Confidence 8888888877654
No 226
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.76 E-value=6.3e-17 Score=164.84 Aligned_cols=282 Identities=15% Similarity=0.170 Sum_probs=175.2
Q ss_pred hHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCC
Q 010250 145 PSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF 224 (514)
Q Consensus 145 ~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~ 224 (514)
...++.+.+++.++ .+.++|++++|++|++..+++... .++++.|++.+++|..+...+... |.+.
T Consensus 58 ~~~~l~~~~a~~~g-~~~~~I~~~~Gs~e~i~~~~~~~~-------~~g~~~vli~~P~y~~y~~~~~~~-G~~~----- 123 (351)
T PRK01688 58 QPKAVIENYAAYAG-VKPEQVLVSRGADEGIELLIRAFC-------EPGKDAILYCPPTYGMYSVSAETI-GVEI----- 123 (351)
T ss_pred ChHHHHHHHHHHhC-CCHHHEEEcCCHHHHHHHHHHHhc-------CCCCCEEEEcCCCHHHHHHHHHHc-CCEE-----
Confidence 34788889988874 467899999999999999998653 133468999999997654322211 1111
Q ss_pred CCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 010250 225 DLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY 304 (514)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~ 304 (514)
..++....|. .+++++++.+. +....+++.| ++.+|.+. +.+.+++|.+.|++
T Consensus 124 -------~~v~~~~~~~-------------~d~~~l~~~~~----~~~lv~l~nP-nNPTG~~~-~~~~l~~l~~~~~~- 176 (351)
T PRK01688 124 -------RTVPTLDNWQ-------------LDLPAIADNLD----GVKVVYVCSP-NNPTGNLI-NPQDLRTLLELTRG- 176 (351)
T ss_pred -------EEeecCCCCC-------------CCHHHHHHhcc----CCcEEEEeCC-CCCCCCCC-CHHHHHHHHHhCCC-
Confidence 1111111111 01355555441 2334555555 45556555 55677888888876
Q ss_pred CCEEEEechhcCcccccccceecccCCCCchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCc
Q 010250 305 DILFIADEVICAFGRLGTMFGCDKYSIKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 381 (514)
Q Consensus 305 gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~ 381 (514)
++++|+||+|..|.... .........+.++ +|||+++-+++++|++++++++++.+... ...|+.+
T Consensus 177 ~~~vivDEay~~f~~~~--s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l~~~---------~~~~~v~ 245 (351)
T PRK01688 177 KAIVVADEAYIEFCPQA--SLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVINLLLKV---------IAPYPLS 245 (351)
T ss_pred CcEEEEECchhhcCCCC--ChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHHHHHHHhc---------cCCCCCC
Confidence 68999999998774211 1111122234543 68998873338999999999999888742 1235556
Q ss_pred HHHHHHHHHHHHHH--h-hccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHH
Q 010250 382 PVSCAVAIEALKIY--K-ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYF 458 (514)
Q Consensus 382 pl~~aaa~aal~~~--~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~ 458 (514)
.+++.+|.++|+.- + -++..+.+.+.++++.+.|+++.... ......+.++.+.+.+ ...+
T Consensus 246 ~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~--~~~ps~~nfi~~~~~~--------------~~~l 309 (351)
T PRK01688 246 TPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVE--QVFDSETNYILARFTA--------------SSAV 309 (351)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCC--eECCCCCcEEEEEcCC--------------HHHH
Confidence 66677777777521 1 11234555666777877777652111 1123345566665531 3457
Q ss_pred HHHHHHCCcEEEeeC------CEEEEeCCCCCCHHHHHHHHHHHH
Q 010250 459 GAQCEKHGMLVRVSG------DNIMMSPPFIMSPEEVDELISKYG 497 (514)
Q Consensus 459 ~~~l~~~Gv~~~~~g------~~iRi~p~~~~t~e~id~~~~~l~ 497 (514)
.+.|+++||+++..+ +++|++ ..+++|+++++++|+
T Consensus 310 ~~~L~~~gi~vr~~~~~~~~~~~iRis---~~~~~e~~~l~~al~ 351 (351)
T PRK01688 310 FKSLWDQGIILRDQNKQPGLSNCLRIT---IGTREECQRVIDALR 351 (351)
T ss_pred HHHHHHCCeEEEECCCcCCCCCeEEEe---CCCHHHHHHHHHhhC
Confidence 889999999998642 569999 458899999998873
No 227
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.76 E-value=5e-16 Score=159.40 Aligned_cols=305 Identities=14% Similarity=0.158 Sum_probs=188.0
Q ss_pred chHHHHHHHHHHhcCcCC-CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccce-eeeecCCCcccc
Q 010250 144 KPSLDLAKELLEMFTASK-MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTL-IAASLSGLPALH 221 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~~~-~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~-~~~~~s~~~~~~ 221 (514)
+...++.+.++++++... .+.+++++||+++++.++.... ..++++++.+.+|+|... ......|...
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~--------~~~~~vlv~~~~~~~~~~~~~~~~~g~~~-- 106 (368)
T PRK13479 37 ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLV--------PRDGKVLVPDNGAYGARIAQIAEYLGIAH-- 106 (368)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhcc--------CCCCeEEEEeCCchHHHHHHHHHHcCCcE--
Confidence 456788888888885422 3568899999999999998663 234577777777766531 1111111111
Q ss_pred CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250 222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 301 (514)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~ 301 (514)
..++.+..+ ..+.+++++.+.+. .++..|.+..+++.+|.+.| +++|.++|
T Consensus 107 ----------~~i~~~~~~-------------~~d~~~l~~~l~~~--~~~~~v~~~~~~~~tG~~~~----~~~i~~l~ 157 (368)
T PRK13479 107 ----------VVLDTGEDE-------------PPDAAEVEAALAAD--PRITHVALVHCETTTGILNP----LDEIAAVA 157 (368)
T ss_pred ----------EEEECCCCC-------------CCCHHHHHHHHHhC--CCCcEEEEEcccCccccccC----HHHHHHHH
Confidence 111111100 01147777776532 23445555555666788877 89999999
Q ss_pred HhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccceeEEeCHHHHHHhhhccCCCC-c----c--
Q 010250 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLG-S----F-- 372 (514)
Q Consensus 302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~-~----~-- 372 (514)
+++|+++|+|.+|+ ||.. . .+.....+|+++ ++|++.|+ .++|++++++++++.+........ . .
T Consensus 158 ~~~~~~livDa~~~-~g~~--~--~~~~~~~~d~~v~s~~K~l~g~-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (368)
T PRK13479 158 KRHGKRLIVDAMSS-FGAI--P--IDIAELGIDALISSANKCIEGV-PGFGFVIARRSELEACKGNSRSLSLDLYDQWAY 231 (368)
T ss_pred HHcCCEEEEEcccc-cCCc--c--ccccccCceEEEecCccccccC-CCceEEEECHHHHHHhhcCCCCeeecHHHHHhh
Confidence 99999999998875 6532 2 222233467764 56988764 457999999998887764211100 0 0
Q ss_pred ---cccCCCCCcHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHhhhhhccCCCceeE-EEeeeeeEEEEEccCCCC
Q 010250 373 ---SHGFTYSGHPVSCAVAIEALKIYKE----RNIVEQVNKIAPKFQDGVKAFSDSPIIGE-IRGTGLILGTEFADNKSP 444 (514)
Q Consensus 373 ---~~~~t~~~~pl~~aaa~aal~~~~~----~~~~~~~~~~~~~l~~~L~~l~~~~~~~~-v~g~g~~~~i~~~~~~~~ 444 (514)
.....|+.+..+.++..++++.+.+ ++..+++.++.+++++.|+++ +...... ....+.+..+.+......
T Consensus 232 ~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (368)
T PRK13479 232 MEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQSPIIVTFHAPADPAY 310 (368)
T ss_pred hcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcCceEEEEECCCCCCc
Confidence 0111235566666666777776643 244577888888888888776 2221111 011122334443322100
Q ss_pred CCCCCCccchHHHHHHHHHHCCcEEEee----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 445 NEPFPPEWGIGAYFGAQCEKHGMLVRVS----GDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 445 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
....+.+.|.++||.++++ .+.+|++.....|++|++++++.|+++++++
T Consensus 311 ---------~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 311 ---------DFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred ---------CHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 1345788999999999864 2479998756779999999999999988653
No 228
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.75 E-value=8.8e-16 Score=159.76 Aligned_cols=348 Identities=11% Similarity=0.054 Sum_probs=193.4
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc--ccccccCCchHHHHHHHHHHhc----C-cCCCCeEEEeCCh
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY--HSFWNRTTKPSLDLAKELLEMF----T-ASKMAKVFFTNSG 171 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~--~~~~~~~~~~~~ela~~L~~~~----~-~~~~~~v~~~~sG 171 (514)
|..++|+..|. ..++ .+|.+.+++.+.+...... ...++ +.....+|.+.|++++ + ....++|++++++
T Consensus 33 ~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga 108 (409)
T PRK07590 33 EAKIIRLGIGD--VTQP-LPPAVIEAMHKAVDEMGTAETFRGYG-PEQGYDFLREKIAENDYQARGCDISADEIFISDGA 108 (409)
T ss_pred CCceEEecCcC--CCCC-CCHHHHHHHHHHHhcccccCCccCCC-CCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCH
Confidence 56788987774 3344 4788999998887653110 00011 2222344555555543 1 2356899999999
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhH
Q 010250 172 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE 251 (514)
Q Consensus 172 seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (514)
.+|+...+.+. ..+++|++.+++|.+........+.... ....+.. ..+..++.... ..
T Consensus 109 ~~al~~l~~~~---------~~gd~V~v~~P~Y~~~~~~~~~~g~~~~-~~~~~~~-~~~~~v~~~~~----------~~ 167 (409)
T PRK07590 109 KCDTGNILDIF---------GPDNTIAVTDPVYPVYVDTNVMAGRTGE-ANEDGRY-SGIVYLPCTAE----------NN 167 (409)
T ss_pred HHHHHHHHHhc---------CCCCEEEEeCCCCcchHHHHHHcCCccc-ccccccc-cceeEeecccc----------cC
Confidence 99988754322 2356899999999886533332221100 0000000 00111111000 00
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eecccC
Q 010250 252 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYS 330 (514)
Q Consensus 252 ~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~g 330 (514)
+ ..+++ + ++..+.+++.| ++.+|.+ .+.+.+++|.++|++||+++|.||+|..|-..+... ......
T Consensus 168 ~----~~d~~----~--~~~k~i~l~nP-~NPTG~~-~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~ 235 (409)
T PRK07590 168 F----VPELP----E--EKVDIIYLCFP-NNPTGTV-LTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIE 235 (409)
T ss_pred C----cccCc----c--cCceEEEEeCC-CCCcCCc-CCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCC
Confidence 0 00111 1 12234455556 5555654 467889999999999999999999998774333211 111111
Q ss_pred CCCc-hh---chhhhhcCCcccceeEEeCHHHHHHhhhccC----CCCcccccCCC-CCcHHHHHHHHHHHHH-Hh--hc
Q 010250 331 IKPD-LV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSN----TLGSFSHGFTY-SGHPVSCAVAIEALKI-YK--ER 398 (514)
Q Consensus 331 v~pD-iv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~----~~~~~~~~~t~-~~~pl~~aaa~aal~~-~~--~~ 398 (514)
-.++ ++ +|||.++-.++++|++++++++++.+..... .........++ +.+.+++.++.++++. .. -+
T Consensus 236 ~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~ 315 (409)
T PRK07590 236 GARECAIEFRSFSKTAGFTGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIK 315 (409)
T ss_pred CcccceEEEecCccccCCcCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHH
Confidence 1122 22 6899886333999999999998873210000 00000111222 3566777777666642 11 12
Q ss_pred cHHHHHHHHHHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEeeC---
Q 010250 399 NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG--- 473 (514)
Q Consensus 399 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g--- 473 (514)
++.+.++++.+.+.+.|++. + +....+ -|.++++.+.+... ...+...++ +.||++.++.
T Consensus 316 ~~~~~~~~~r~~l~~~L~~~---~-~~~~~~~g~~f~wi~~~~~~~-----------~~~~~~~l~~~~gv~v~pg~~f~ 380 (409)
T PRK07590 316 ELIDYYMENAKIIREGLESA---G-FEVYGGVNAPYIWVKTPDGMS-----------SWDFFDKLLQEANVVGTPGSGFG 380 (409)
T ss_pred HHHHHHHHHHHHHHHHHHhc---C-CceecCCcceEEEEECCCCCC-----------HHHHHHHHHHHCCEEEeChhHhC
Confidence 34566777777777777764 2 112233 35677888754210 234666665 5799988642
Q ss_pred ----CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 474 ----DNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 474 ----~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
+.|||+ +..+++++++++++|.+++
T Consensus 381 ~~~~~~iRi~--~~~~~~~l~~~l~rl~~~~ 409 (409)
T PRK07590 381 PSGEGYFRLS--AFGSRENVLEAMERIKKAL 409 (409)
T ss_pred CCCCCEEEEE--ccCCHHHHHHHHHHHHhhC
Confidence 469999 5678999999999998753
No 229
>PLN02651 cysteine desulfurase
Probab=99.75 E-value=1.4e-16 Score=163.25 Aligned_cols=323 Identities=18% Similarity=0.183 Sum_probs=189.9
Q ss_pred EEEccCCcccccCCCCCHHHHHHHHHHHhcCC-cccc----ccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250 102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHS----FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 176 (514)
Q Consensus 102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~----~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~ 176 (514)
|||..+. +.-++++.+++.+.+.... ..+. ......+...++.++++++++. +.+.++|++||++|+.
T Consensus 2 Yld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~-~~~~v~~t~~~t~a~~ 74 (364)
T PLN02651 2 YLDMQAT------TPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGA-DPKEIIFTSGATESNN 74 (364)
T ss_pred cccCcCC------CCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCC-CCCeEEEeCCHHHHHH
Confidence 6665433 3468899999988875321 1100 0001134456777888888853 4578999999999999
Q ss_pred HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee--cCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250 177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS--LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254 (514)
Q Consensus 177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~--~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
.+++.+.... . .++++||+.+..|+........ ..|.. +..++....++
T Consensus 75 ~~l~~~~~~~---~-~~g~~vl~~~~~h~s~~~~~~~~~~~g~~------------v~~v~~~~~~~------------- 125 (364)
T PLN02651 75 LAIKGVMHFY---K-DKKKHVITTQTEHKCVLDSCRHLQQEGFE------------VTYLPVKSDGL------------- 125 (364)
T ss_pred HHHHHHHHhc---c-CCCCEEEEcccccHHHHHHHHHHHhcCCE------------EEEEccCCCCc-------------
Confidence 9998764221 1 2345677765555442111111 11111 11111111000
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCc
Q 010250 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPD 334 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pD 334 (514)
.+.+++++.+. ++++++++..+++.+|.+.| +++|.++|++||+++++|.+|+ +|.. .++...+.+|
T Consensus 126 ~d~~~l~~~i~----~~t~lv~v~~~~n~tG~~~~----l~~I~~~~~~~g~~~~vD~a~~-~g~~----~~~~~~~~~D 192 (364)
T PLN02651 126 VDLDELAAAIR----PDTALVSVMAVNNEIGVIQP----VEEIGELCREKKVLFHTDAAQA-VGKI----PVDVDDLGVD 192 (364)
T ss_pred CCHHHHHHhcC----CCcEEEEEECCCCCceeccc----HHHHHHHHHHcCCEEEEEcchh-hCCc----ccCcccCCCC
Confidence 11467777664 35778888888889999988 9999999999999999999997 4432 2233334469
Q ss_pred hhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccC-CCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHH
Q 010250 335 LVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF-TYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAP 409 (514)
Q Consensus 335 iv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~-t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~ 409 (514)
++++| | +.|+ ..+|+++++++..+.+.+.... +....+. ....|..++.+..++|+.+.+ +++.++.+++.+
T Consensus 193 ~~~~s~hK-~~gp-~G~g~l~v~~~~~~~l~p~~~g-~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~ 269 (364)
T PLN02651 193 LMSISGHK-IYGP-KGVGALYVRRRPRVRLEPLMSG-GGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRE 269 (364)
T ss_pred EEEechhh-hCCC-CceEEEEEcCCCCCCCCccccC-CCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 88775 7 5443 5689999998776655432100 0000001 123345566666777877654 345677788888
Q ss_pred HHHhhhhh-ccCCCceeE--E-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------------
Q 010250 410 KFQDGVKA-FSDSPIIGE--I-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS------------- 472 (514)
Q Consensus 410 ~l~~~L~~-l~~~~~~~~--v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~------------- 472 (514)
++++.|++ +.+..+... . .....++.|.+.... ...+...|.+ |.++.+
T Consensus 270 ~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~------------~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~ 335 (364)
T PLN02651 270 RLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYVE------------GESLLMGLKE--VAVSSGSACTSASLEPSYV 335 (364)
T ss_pred HHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCCC------------HHHHHHHhCC--EEEEchhhcCCCCCCcCHH
Confidence 88888764 322222221 0 112335566553211 3345566643 555421
Q ss_pred -----------CCEEEEeCCCCCCHHHHH
Q 010250 473 -----------GDNIMMSPPFIMSPEEVD 490 (514)
Q Consensus 473 -----------g~~iRi~p~~~~t~e~id 490 (514)
.+.+|+++...+|++|||
T Consensus 336 ~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 336 LRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred HHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 146999999999999985
No 230
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.74 E-value=7.1e-16 Score=163.23 Aligned_cols=309 Identities=12% Similarity=0.095 Sum_probs=179.5
Q ss_pred chHHHHHHHHHHhcC---cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccc
Q 010250 144 KPSLDLAKELLEMFT---ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPAL 220 (514)
Q Consensus 144 ~~~~ela~~L~~~~~---~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~ 220 (514)
+....+++.+.+.++ ..+.++|++++|+++|++.++.... ..++.|++.++.|.+.........|...
T Consensus 98 ~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~--------~pGD~Vlv~~P~Y~~~~~~~~~~~G~~v- 168 (496)
T PLN02376 98 KFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLA--------DPGDVFLIPSPYYAAFDRDLRWRTGVEI- 168 (496)
T ss_pred HHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhC--------CCCCEEEECCCCccchHHHHHhhCCCEE-
Confidence 344445555544322 1356899999999999999998763 3357899999999887432221122211
Q ss_pred cCCCCCCCCcccccCCC--CcccCCCCCCChhHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHH
Q 010250 221 HQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEK 296 (514)
Q Consensus 221 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~ 296 (514)
..+++. +.|+ .+.+.++..+... ...++.+|++...++.+|.+. +++.+++
T Consensus 169 -----------v~v~~~~~~~~~-------------~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~-s~e~l~~ 223 (496)
T PLN02376 169 -----------IPVPCSSSDNFK-------------LTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTML-DKDTLTN 223 (496)
T ss_pred -----------EEEeCCCCccCc-------------CCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccC-CHHHHHH
Confidence 111111 1111 1135555443221 123455444444455666544 6789999
Q ss_pred HHHHHHhcCCEEEEechhcCccccccccee--cc---cC---CCCch----hchhhhhcCCcccceeEEe-CHHHHHHhh
Q 010250 297 VQAVVKKYDILFIADEVICAFGRLGTMFGC--DK---YS---IKPDL----VSFAKALSSAYMPIGAILV-SPEVSEVIH 363 (514)
Q Consensus 297 l~~l~~~~gillI~DEv~tG~gr~G~~~~~--~~---~g---v~pDi----v~~sK~l~gG~~pig~v~~-~~~i~~~l~ 363 (514)
|.++|++||+++|+||+|..+-..+..+.. +. ++ ..+|. -+|||.++-.++++|++++ ++.+.+.+.
T Consensus 224 L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~ 303 (496)
T PLN02376 224 LVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCAR 303 (496)
T ss_pred HHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHH
Confidence 999999999999999999976444432211 11 11 12342 2689988643399999998 466666554
Q ss_pred hccCCCCcccccCCCCCcHHHHHHHHHHHHHH---hh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEE
Q 010250 364 SQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY---KE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEF 438 (514)
Q Consensus 364 ~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~---~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~ 438 (514)
.. . ..+..+.+++.++.+.|+-- ++ ....++++++.+.+.+.|++. ..+.. ...-|+++++++
T Consensus 304 ~~-------~--~~~~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~--~~~aG~flwi~l 371 (496)
T PLN02376 304 KM-------S--SFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-DIACL--TSNAGLFAWMDL 371 (496)
T ss_pred HH-------h--hcCCCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc--CCCceEEEEEEc
Confidence 21 1 11224556666665555311 11 112445566666676777653 22221 123468889988
Q ss_pred ccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEeeC-------CEEEEeCCCC-CCHHHHHHHHHHHHHHHHHHH
Q 010250 439 ADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVSG-------DNIMMSPPFI-MSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~g-------~~iRi~p~~~-~t~e~id~~~~~l~~~l~~~~ 504 (514)
........ .......+++.+.+ .||.+.|+. +++||+ +. .+++++++++++|.+++.+..
T Consensus 372 ~~~~~~~~----~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~--fa~~~~~~l~~al~rl~~~l~~~~ 440 (496)
T PLN02376 372 RHLLRDRN----SFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRIC--FANMDDDTLHVALGRIQDFVSKNK 440 (496)
T ss_pred hhhhccCC----chhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEE--eeCCCHHHHHHHHHHHHHHHHHhh
Confidence 54211100 00112346676765 599998742 479999 55 578999999999999987544
No 231
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.74 E-value=1.2e-15 Score=159.70 Aligned_cols=308 Identities=11% Similarity=0.115 Sum_probs=178.1
Q ss_pred CCchHHHHHHHHHHhcC---cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc
Q 010250 142 TTKPSLDLAKELLEMFT---ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP 218 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~---~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~ 218 (514)
.......+++.+.+.++ +.+.+++++++++++|++.++.+.. ..++.|++.++.|.+.........+..
T Consensus 97 ~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~--------~pGD~Vlv~~P~Y~~f~~~~~~~~g~~ 168 (447)
T PLN02607 97 LKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILA--------DPGDALLVPTPYYPGFDRDLRWRTGVK 168 (447)
T ss_pred hHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhC--------CCCCEEEEcCCCCcchHHHHHhcCCcE
Confidence 44445556666655443 2356789999999999998877553 345789999999988643221112211
Q ss_pred cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh--CCCcEE-EEEEccccCCCCcccCChhHHH
Q 010250 219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIA-AFIAEPVIGAGGVIPPPATYFE 295 (514)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~--~~~~~a-avivEpv~~~~G~~~p~~~~L~ 295 (514)
. ..+++... +.| ..+.+.+++.+.+. ...++. .+++.|. +..|. +.+++.++
T Consensus 169 v------------v~v~~~~~----------~~f-~~~~~~le~a~~~a~~~~~~vk~lll~nP~-NPtG~-~~s~e~l~ 223 (447)
T PLN02607 169 I------------VPIHCDSS----------NNF-QVTPQALEAAYQEAEAANIRVRGVLITNPS-NPLGA-TVQRSVLE 223 (447)
T ss_pred E------------EEEeCCCC----------CCC-cCCHHHHHHHHHHHHHhCCCeeEEEEeCCC-CCcCc-ccCHHHHH
Confidence 1 11111000 001 01246677666532 123454 5555554 45554 44678999
Q ss_pred HHHHHHHhcCCEEEEechhcCccccccccee--c---ccCC-C-Cc-hh---chhhhhcCCcccceeEEe-CHHHHHHhh
Q 010250 296 KVQAVVKKYDILFIADEVICAFGRLGTMFGC--D---KYSI-K-PD-LV---SFAKALSSAYMPIGAILV-SPEVSEVIH 363 (514)
Q Consensus 296 ~l~~l~~~~gillI~DEv~tG~gr~G~~~~~--~---~~gv-~-pD-iv---~~sK~l~gG~~pig~v~~-~~~i~~~l~ 363 (514)
+|.++|++||+++|+||+|.++-..+..+.. + ..+. . ++ ++ +|||.++..++++|++++ +++++..+.
T Consensus 224 ~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~ 303 (447)
T PLN02607 224 DILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTAR 303 (447)
T ss_pred HHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHH
Confidence 9999999999999999999864222222211 1 1111 1 33 22 689988743389999998 677777665
Q ss_pred hccCCCCcccccCCC-CCcHHHHHHHHHHHHH---Hhh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEE
Q 010250 364 SQSNTLGSFSHGFTY-SGHPVSCAVAIEALKI---YKE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTE 437 (514)
Q Consensus 364 ~~~~~~~~~~~~~t~-~~~pl~~aaa~aal~~---~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~ 437 (514)
.. ..+ ..+.+++.++.+.|+- .++ +...+++++..+.+.+.|++. ..+.. ...-|++++++
T Consensus 304 ~~----------~~~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~--~~~ag~fvw~~ 370 (447)
T PLN02607 304 RM----------SSFTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECL--KGNAGLFCWMN 370 (447)
T ss_pred HH----------hhcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcc--cCCeeEEEEEE
Confidence 31 112 2344555555444431 100 112344555555666666654 22221 12347888998
Q ss_pred EccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEeeC-------CEEEEeCCCC-CCHHHHHHHHHHHHHHHHH
Q 010250 438 FADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVSG-------DNIMMSPPFI-MSPEEVDELISKYGKALKA 502 (514)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~g-------~~iRi~p~~~-~t~e~id~~~~~l~~~l~~ 502 (514)
+....... .+.....++..+++ .||.+.|+. +++|++ +. .+++++++++++|.+++++
T Consensus 371 L~~~~~~~-----~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~--fa~~~~~~l~~gl~Ri~~~l~~ 437 (447)
T PLN02607 371 LSPLLETP-----TREGELALWDSILREVKLNISPGSSCHCSEPGWFRVC--FANMSEDTLEVALKRIHRFMDR 437 (447)
T ss_pred chHhhcCC-----CchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEE--eccCCHHHHHHHHHHHHHHHHH
Confidence 85421100 01112346666654 799998742 579999 66 4899999999999999864
No 232
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.74 E-value=2.4e-15 Score=156.97 Aligned_cols=349 Identities=15% Similarity=0.111 Sum_probs=191.6
Q ss_pred EEEEccCCcccccCCCCC--HHHHHHHHHHHhcCCc-----cccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChh
Q 010250 101 KYLDSLAGLWCTALGGSE--PRLVAAATAQLNTLPF-----YHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGS 172 (514)
Q Consensus 101 ~ylD~~s~~~~~~lGh~~--p~v~~A~~~~l~~~~~-----~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGs 172 (514)
..|||..|.. .-... +.+.+++.+.+++... .+....+..+....+++.+....+ ....++|++++|+.
T Consensus 31 ~~i~l~~g~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~ 107 (416)
T PRK09440 31 GAIMLGGGNP---AHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQ 107 (416)
T ss_pred CceeccCCCC---CccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChH
Confidence 3588876632 11121 3456666665543211 111111222334444444443322 23567899999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccEEEE-EecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhH
Q 010250 173 EANDTQVKLVWYYNNALGRPNKKKFIA-RQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE 251 (514)
Q Consensus 173 eA~~~Alk~a~~~~~~~~~~~~~~ii~-~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (514)
+|+..++++.... .....++.|++ .+++|++....+....... ... +.+..++ .+.+.
T Consensus 108 ~al~~~~~~l~~~---~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~----~~~---~~~~~~~-~~~~~---------- 166 (416)
T PRK09440 108 SAFFYLFNLFAGR---RADGSLKKILFPLAPEYIGYADAGLEEDLFV----SYR---PNIELLP-EGQFK---------- 166 (416)
T ss_pred HHHHHHHHHHhcc---ccCCCCCeEEEecCCCchhhHHHhhccCcee----ecc---ccccccc-ccccc----------
Confidence 9999988766310 00012457888 6999998753221111000 000 0000000 00000
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eecccC
Q 010250 252 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYS 330 (514)
Q Consensus 252 ~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~g 330 (514)
+ ..+++.|+ + ..+..+.+++.| ++.+|.+. +.+.+++|.++|++||+++|+||+|..+ .....+ .... .
T Consensus 167 ~-~~d~~~l~--~---~~~~~~i~l~~P-~NPTG~~~-s~~~~~~l~~~a~~~~~~iI~De~Y~~~-~~~~~~~~~~~-~ 236 (416)
T PRK09440 167 Y-HVDFEHLH--I---DEDTGAICVSRP-TNPTGNVL-TDEELEKLDALARQHNIPLLIDNAYGPP-FPGIIFSEATP-L 236 (416)
T ss_pred c-CCCHHHcc--c---CCCceEEEEecC-CCCCCccC-CHHHHHHHHHHHHHcCCcEEEeCCcccc-CCCcchhhcCc-c
Confidence 0 00134443 1 222334445555 56667654 6788999999999999999999999632 111000 0000 1
Q ss_pred CCCch---hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--h---ccHHH
Q 010250 331 IKPDL---VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--E---RNIVE 402 (514)
Q Consensus 331 v~pDi---v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~---~~~~~ 402 (514)
..+.+ -+|||....| +++|++++++++++.+... ......+.+.+++.++.++++.-. + +.+..
T Consensus 237 ~~~~vI~~~SfSK~~~pG-lRiG~~i~~~~l~~~~~~~-------~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~ 308 (416)
T PRK09440 237 WNPNIILCMSLSKLGLPG-VRCGIVIADEEIIEALSNM-------NGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRP 308 (416)
T ss_pred ccCCeEEEecccccCCCc-ceEEEEeCCHHHHHHHHHH-------HHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHH
Confidence 12233 3689953334 9999999999998888642 111234557777777777764211 1 11233
Q ss_pred HHHHHHHHHHhhhhhc-cCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----C--
Q 010250 403 QVNKIAPKFQDGVKAF-SDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----G-- 473 (514)
Q Consensus 403 ~~~~~~~~l~~~L~~l-~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g-- 473 (514)
.++++.+.+++.|++. .... ....... |.++++++.+... ....+...|.++||.+.++ +
T Consensus 309 ~~~~r~~~~~~~L~~~l~~~~-~~~~~p~gg~fiw~~~~~~~~----------~~~~~~~~l~~~gV~v~pg~~F~~~~~ 377 (416)
T PRK09440 309 FYRQKVQLAIALLRRYLPDEP-CLIHKPEGAIFLWLWFKDLPI----------TTEELYQRLKARGVLVVPGHYFFPGLD 377 (416)
T ss_pred HHHHHHHHHHHHHHHhcccCC-eEEecCCCceEEEEECCCCCC----------CHHHHHHHHHHCCEEEechHhhCCCCc
Confidence 4455556666666543 2222 2222343 6777887754110 1345778888999999863 1
Q ss_pred -------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 474 -------DNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 474 -------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
+++||+ +..+++++++++++|.+++++..
T Consensus 378 ~~~~~~~~~iRis--~~~~~~~l~~~i~~l~~~~~~~~ 413 (416)
T PRK09440 378 EDWPHAHQCIRMN--YVQDDEEIEKGIAILAEEVEKAY 413 (416)
T ss_pred cccCCcCceEEEE--ecCCHHHHHHHHHHHHHHHHHHh
Confidence 269999 55689999999999999987644
No 233
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.74 E-value=3.8e-16 Score=161.79 Aligned_cols=335 Identities=12% Similarity=0.082 Sum_probs=191.4
Q ss_pred EEEEccCCcccccCCCCC--HHHHHHHHHHHhcCCc-cccccccCCchHHHHHHHHHHhcCc-----CCCCeE--EEeCC
Q 010250 101 KYLDSLAGLWCTALGGSE--PRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFTA-----SKMAKV--FFTNS 170 (514)
Q Consensus 101 ~ylD~~s~~~~~~lGh~~--p~v~~A~~~~l~~~~~-~~~~~~~~~~~~~ela~~L~~~~~~-----~~~~~v--~~~~s 170 (514)
..|||..|....+-++-+ +.+.+++.+.++.... .+. +.....+|.+.+++++.. ...+++ ++|+|
T Consensus 27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~----~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~G 102 (396)
T PRK09257 27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYL----PIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPG 102 (396)
T ss_pred CcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcC----CCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCC
Confidence 468888775433323333 6788887776643211 111 222234455555554421 135666 89999
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcccCCCCCCC
Q 010250 171 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYWRYAHPGET 248 (514)
Q Consensus 171 GseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 248 (514)
+++|+..++++.... ..++.|++.+++|.+........+.... .++. ++.|
T Consensus 103 a~~al~~~~~~l~~~------~pGd~Vlv~~P~y~~~~~~~~~~g~~~v-------------~v~~~~~~~~-------- 155 (396)
T PRK09257 103 GTGALRVGADFLKRA------FPDAKVWVSDPTWPNHRAIFEAAGLEVK-------------TYPYYDAATK-------- 155 (396)
T ss_pred ccHHHHHHHHHHHHh------CCCCeEEECCCCcccHHHHHHHcCCcEE-------------EEeccccccC--------
Confidence 999999998754211 2347899999999887543333222211 1111 0001
Q ss_pred hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc-cc-ccee
Q 010250 249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL-GT-MFGC 326 (514)
Q Consensus 249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~-G~-~~~~ 326 (514)
..+++++++.+.+..+ +..++++...++.+|.+ .+++.+++|.++|++||+++|.||+|.+|... +. ....
T Consensus 156 -----~~d~~~l~~~~~~~~~-~~~~~i~~~p~NPTG~~-~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~ 228 (396)
T PRK09257 156 -----GLDFDAMLADLSQAPA-GDVVLLHGCCHNPTGAD-LTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGL 228 (396)
T ss_pred -----ccCHHHHHHHHHhCCC-CCEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHH
Confidence 1125777777654322 23455545556666754 46789999999999999999999999987532 11 1111
Q ss_pred -cccCCCCchh---chhhhhcC-CcccceeEEe---CHHH----HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH
Q 010250 327 -DKYSIKPDLV---SFAKALSS-AYMPIGAILV---SPEV----SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI 394 (514)
Q Consensus 327 -~~~gv~pDiv---~~sK~l~g-G~~pig~v~~---~~~i----~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~ 394 (514)
...+..+.++ +|||.++- | +++|++++ +++. +..+.. .......+.+++++.++.+.|+.
T Consensus 229 ~~~~~~~~~vi~i~SfSK~~~~~G-lRiG~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~q~~~~~~l~~ 300 (396)
T PRK09257 229 RAFAAAGLELLVASSFSKNFGLYG-ERVGALSVVAEDAEEADRVLSQLKA-------TIRTNYSNPPAHGAAIVATILND 300 (396)
T ss_pred HHHHhcCCcEEEEEEcCCcCcccc-ccceeEEEEeCCHHHHHHHHHHHHH-------HhhhhcCCCcHHHHHHHHHHhCC
Confidence 1111122333 68998885 5 89999873 4443 333321 01112223456666666555532
Q ss_pred H------hh--ccHHHHHHHHHHHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC
Q 010250 395 Y------KE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH 465 (514)
Q Consensus 395 ~------~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 465 (514)
- .+ ++..++++++.+.+.+.|+++......... ..-|+++++.+.+ +.+.+.+.++
T Consensus 301 ~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~~---------------~~~~~l~~~~ 365 (396)
T PRK09257 301 PELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQRGMFSYSGLTP---------------EQVDRLREEF 365 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccceEEEecCCCH---------------HHHHHHHHcC
Confidence 1 11 235667777778888888765110011112 2235556665421 2244555678
Q ss_pred CcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 466 GMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 466 Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
||.+.+.+ ||+.. ..++++|++++++|.+++
T Consensus 366 ~V~~~p~~---ri~~~-~~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 366 GVYAVGSG---RINVA-GLNESNIDYVAEAIAAVL 396 (396)
T ss_pred CEEEcCCC---eEEEe-eCCHHHHHHHHHHHHhhC
Confidence 99988754 88831 389999999999998753
No 234
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.74 E-value=7.6e-16 Score=156.93 Aligned_cols=305 Identities=15% Similarity=0.154 Sum_probs=187.3
Q ss_pred HHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEec
Q 010250 123 AAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202 (514)
Q Consensus 123 ~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~ 202 (514)
+++.+.+....+ ...+...++++.|+++++ .+++++++||++|+..+++... . ..+++|++...
T Consensus 3 ~~~~~~~~~~~~------~~~~~~~~~~~~la~~~~---~~~~~~~~sgt~al~~~l~~l~------~-~~gd~vl~~~~ 66 (352)
T cd00616 3 EAVEEVLDSGWL------TLGPKVREFEKAFAEYLG---VKYAVAVSSGTAALHLALRALG------I-GPGDEVIVPSF 66 (352)
T ss_pred HHHHHHHHcCCc------cCCHHHHHHHHHHHHHhC---CCeEEEECCHHHHHHHHHHHcC------C-CCCCEEEeCCc
Confidence 455555554322 133567899999999984 4679999999999999998762 1 23468999999
Q ss_pred CCcccceeeeecCCCccccCCCCCCCCcccccCCCC-cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcccc
Q 010250 203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI 281 (514)
Q Consensus 203 ~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~ 281 (514)
+||+........ |... ..++... .+ ..+++++++.+. +++++|++..+
T Consensus 67 ~~~~~~~~~~~~-g~~~------------~~~~~~~~~~-------------~~d~~~l~~~i~----~~~~~v~~~~~- 115 (352)
T cd00616 67 TFVATANAILLL-GATP------------VFVDIDPDTY-------------NIDPELIEAAIT----PRTKAIIPVHL- 115 (352)
T ss_pred chHHHHHHHHHc-CCeE------------EEEecCCCcC-------------CcCHHHHHHhcC----cCCeEEEEECC-
Confidence 988754322211 1111 0011110 00 112466666653 34666666543
Q ss_pred CCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh----hhhcCCcccceeEEeC-H
Q 010250 282 GAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA----KALSSAYMPIGAILVS-P 356 (514)
Q Consensus 282 ~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s----K~l~gG~~pig~v~~~-~ 356 (514)
.|...+ +++|+++|++||+++|+|++|+ +|... .....+...|+.++| |.+++| +.|+++.+ +
T Consensus 116 --~G~~~~----~~~i~~l~~~~~i~li~D~a~~-~g~~~---~~~~~~~~~d~~~~S~~~~K~~~~~--~gg~~~~~~~ 183 (352)
T cd00616 116 --YGNPAD----MDAIMAIAKRHGLPVIEDAAQA-LGATY---KGRKVGTFGDAGAFSFHPTKNLTTG--EGGAVVTNDE 183 (352)
T ss_pred --CCCcCC----HHHHHHHHHHcCCeEEEECCCC-CCCeE---CCEEcccCcceeEEcCCCCCCCccc--CceEEEECCH
Confidence 465555 8999999999999999999998 44321 111223334666655 999653 45667665 5
Q ss_pred HHHHHhhhccCCC--------CcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEE-
Q 010250 357 EVSEVIHSQSNTL--------GSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI- 427 (514)
Q Consensus 357 ~i~~~l~~~~~~~--------~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v- 427 (514)
++.+.+....... .....+.++..+++.++.++..++.+ +++.++.+++.+++++.|+++.+..+....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~--~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~ 261 (352)
T cd00616 184 ELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKL--DEIIARRREIAERYKELLADLPGIRLPDVPP 261 (352)
T ss_pred HHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHhcCCCCccCCCCCC
Confidence 7766554311000 00112334556778787777766654 346778888999999999876333322211
Q ss_pred --EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----------------------------CCEEE
Q 010250 428 --RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------------------------GDNIM 477 (514)
Q Consensus 428 --~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------------------------g~~iR 477 (514)
.....++.+.+.+... . ....+.+.|.++||.+... .+.||
T Consensus 262 ~~~~~~~~~~~~~~~~~~-~--------~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~ 332 (352)
T cd00616 262 GVKHSYHLYVIRLDPEAG-E--------SRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLS 332 (352)
T ss_pred CCceeeEEEEEEECCcCC-C--------CHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEE
Confidence 1233456666543100 0 1456888999999976511 03699
Q ss_pred EeCCCCCCHHHHHHHHHHHH
Q 010250 478 MSPPFIMSPEEVDELISKYG 497 (514)
Q Consensus 478 i~p~~~~t~e~id~~~~~l~ 497 (514)
+.+....|++||+.++++|+
T Consensus 333 l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 333 LPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred ccCCCCCCHHHHHHHHHHhC
Confidence 99999999999999998874
No 235
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.73 E-value=4.3e-16 Score=161.80 Aligned_cols=341 Identities=12% Similarity=0.084 Sum_probs=191.6
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc-cccccccCCchHHHHHHHHHHhcCc-----CCCCeEEE--eCC
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFTA-----SKMAKVFF--TNS 170 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~-~~~~~~~~~~~~~ela~~L~~~~~~-----~~~~~v~~--~~s 170 (514)
++..+|+..|.... +. .++.+.+++.+++..... .......+.....+|.+.+++++.. ...++|++ +++
T Consensus 28 ~~~~i~l~~g~~~~-~~-~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G 105 (404)
T PTZ00376 28 SPSKVNLGIGAYRD-EN-GKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALS 105 (404)
T ss_pred CcccEecccceeEC-CC-CCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccC
Confidence 34668887773211 22 223344555554422110 0000011223334555666655421 24567874 889
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC-C-CcccCCCCCCC
Q 010250 171 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC-P-HYWRYAHPGET 248 (514)
Q Consensus 171 GseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~ 248 (514)
|++|...++.+...+ . ..++.|++.+++|++........+.... .++. + +.|
T Consensus 106 ~~~al~~~~~~l~~~----~-~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~-------------~v~l~~~~~~-------- 159 (404)
T PTZ00376 106 GTGALRLGFEFLKRF----L-PAGTTVYVSNPTWPNHVNIFKSAGLNVK-------------EYRYYDPKTK-------- 159 (404)
T ss_pred cchHHHHHHHHHHHh----c-CCCCEEEEcCCCchhHHHHHHHcCCcee-------------eccccCcccC--------
Confidence 999999888755332 1 2347899999999987543333222211 0111 0 001
Q ss_pred hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc---cce
Q 010250 249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT---MFG 325 (514)
Q Consensus 249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~---~~~ 325 (514)
..+.+.+++.+.+..+. ..++++...+|.+|.+ .+++.+++|.++|++||+++|.||+|.+|...+. ...
T Consensus 160 -----~~d~~~l~~~~~~~~~~-~~~~~~~~p~NPTG~~-~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~ 232 (404)
T PTZ00376 160 -----GLDFDGMLEDLRTAPNG-SVVLLHACAHNPTGVD-PTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYA 232 (404)
T ss_pred -----CcCHHHHHHHHHhCCCC-CEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHH
Confidence 01246777776543222 3455545455666654 4678999999999999999999999998744321 001
Q ss_pred ecc-cCCCCchh---chhhhhc-CCcccceeE---EeCHHHHHHhhhccCCCCcccccCCCC-CcHHHHHHHHHHHHHHh
Q 010250 326 CDK-YSIKPDLV---SFAKALS-SAYMPIGAI---LVSPEVSEVIHSQSNTLGSFSHGFTYS-GHPVSCAVAIEALKIYK 396 (514)
Q Consensus 326 ~~~-~gv~pDiv---~~sK~l~-gG~~pig~v---~~~~~i~~~l~~~~~~~~~~~~~~t~~-~~pl~~aaa~aal~~~~ 396 (514)
... ....+.++ +|||.++ .| +++|++ ++++++++.+...- .. ...++++ .+++++.++.++|+.-.
T Consensus 233 ~~~~~~~~~~vi~i~SfSK~~~~~G-lRvG~~~~~~~~~~~~~~l~~~~---~~-~~~~~~~~~~~~~q~~~~~~l~~~~ 307 (404)
T PTZ00376 233 IRLFAERGVEFLVAQSFSKNMGLYG-ERIGALHIVCANKEEAANVLSQL---KL-IIRPMYSSPPIHGARIADRILSDPE 307 (404)
T ss_pred HHHHHhcCCcEEEEEeCCCcccccc-cccceEEEEeCCHHHHHHHHHHH---HH-HHhhhcCCCchHHHHHHHHHhCCHH
Confidence 111 11112333 6899888 45 999998 56877655442110 00 1122333 35677777777774211
Q ss_pred ---h-----ccHHHHHHHHHHHHHhhhhhccCCC-ceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-
Q 010250 397 ---E-----RNIVEQVNKIAPKFQDGVKAFSDSP-IIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH- 465 (514)
Q Consensus 397 ---~-----~~~~~~~~~~~~~l~~~L~~l~~~~-~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 465 (514)
+ ++..++++++.+.+.+.|+++ ..+ ........ |.++++.+. ..++++|.++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~~~~p~gg~f~~~~~~----------------~~~~~~L~~~~ 370 (404)
T PTZ00376 308 LRAEWLSELKEMSGRIQNMRQLLYDELKAL-GSPGDWEHIINQIGMFSFTGLT----------------KEQVERLIEKY 370 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCcccccccCceEEEecCCC----------------HHHHHHHHHhC
Confidence 0 123456677788888888775 212 11112233 444455432 2366777766
Q ss_pred CcEEEeeCCEEEEeCCCC-CCHHHHHHHHHHHHHHHH
Q 010250 466 GMLVRVSGDNIMMSPPFI-MSPEEVDELISKYGKALK 501 (514)
Q Consensus 466 Gv~~~~~g~~iRi~p~~~-~t~e~id~~~~~l~~~l~ 501 (514)
||.+.|++ |++ +. .+++++++++++|++++.
T Consensus 371 ~v~v~p~~---Ris--~~~~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 371 HIYLLDNG---RIS--VAGLTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred CEeecCCC---eEE--EeccCHHhHHHHHHHHHHHHh
Confidence 99988875 888 43 899999999999998874
No 236
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.73 E-value=2.4e-16 Score=154.69 Aligned_cols=277 Identities=16% Similarity=0.175 Sum_probs=170.4
Q ss_pred CHHHHHHHHHHHhcC--CccccccccCCchHHHHHHHHHHhcCc--CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCC
Q 010250 118 EPRLVAAATAQLNTL--PFYHSFWNRTTKPSLDLAKELLEMFTA--SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPN 193 (514)
Q Consensus 118 ~p~v~~A~~~~l~~~--~~~~~~~~~~~~~~~ela~~L~~~~~~--~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~ 193 (514)
+..|.+++++.+... ..|++.++ ...+...|++.+.++++. ...++|+.++++.+|+..++.... ..
T Consensus 46 P~fv~ea~~~~~~~~~~~qYt~~~G-~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~--------~~ 116 (420)
T KOG0257|consen 46 PKFVTEAAKNAAKEPSTNQYTRGYG-LPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLL--------NP 116 (420)
T ss_pred cHHHHHHHHHHhccchhccccccCC-chHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHc--------CC
Confidence 345778888887663 12333333 445566777777775532 245789999999999998887664 45
Q ss_pred ccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEE
Q 010250 194 KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIA 273 (514)
Q Consensus 194 ~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~a 273 (514)
.+.||++++.|..+.......++.+.+...- +.... . ....| ..|.++||..+. .++.+
T Consensus 117 GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~-~~~g~---~-~s~~~-------------~~D~~~le~~~t---~kTk~ 175 (420)
T KOG0257|consen 117 GDEVIVFEPFFDCYIPQVVMAGGTPVFVPLK-PKEGN---V-SSSDW-------------TLDPEELESKIT---EKTKA 175 (420)
T ss_pred CCEEEEecCcchhhhhHHhhcCCcceeeccc-ccccc---c-cCccc-------------cCChHHHHhhcc---CCccE
Confidence 6899999999999887777777776543211 00000 0 01111 122577777775 23444
Q ss_pred EEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc---cceecccCC---CCchhchhhhhcCCcc
Q 010250 274 AFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT---MFGCDKYSI---KPDLVSFAKALSSAYM 347 (514)
Q Consensus 274 avivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~---~~~~~~~gv---~pDiv~~sK~l~gG~~ 347 (514)
.|++.|. +..|.+. +++.|++|.+||++||+++|+||||.-+-..|. +++.. .|+ .-.+-++||.++--+|
T Consensus 176 Ii~ntPh-NPtGkvf-sReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~asl-Pgm~ertitvgS~gKtf~~TGW 252 (420)
T KOG0257|consen 176 IILNTPH-NPTGKVF-SREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASL-PGMYERTITVGSFGKTFGVTGW 252 (420)
T ss_pred EEEeCCC-CCcCccc-CHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecC-CchhheEEEeccccceeeeeee
Confidence 5555555 4555544 679999999999999999999999986655553 22322 222 2233468895554229
Q ss_pred cceeEEeCHHHHHHhhhccCCCCcccccCCCCCc-H--HHHHHHHHHHHH-Hh-------hccHHHHHHHHHHHHHhhhh
Q 010250 348 PIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH-P--VSCAVAIEALKI-YK-------ERNIVEQVNKIAPKFQDGVK 416 (514)
Q Consensus 348 pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~-p--l~~aaa~aal~~-~~-------~~~~~~~~~~~~~~l~~~L~ 416 (514)
++|++++++.++...... ..-..+..+ | .+++++.+ ++. +. ..++...++++++.|.+.|.
T Consensus 253 rlGW~igp~~L~~~~~~v-------h~~~~~~~~Tp~q~A~a~a~~-~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~ 324 (420)
T KOG0257|consen 253 RLGWAIGPKHLYSALFPV-------HQNFVFTCPTPIQEASAAAFA-LELACLQPGGSYFITELVKEYKEKRDILAKALE 324 (420)
T ss_pred eeeeeechHHhhhhHHHH-------hhccccccCcHHHHHHHHHHh-hhhhccCCcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988887776532 111233222 2 22333322 122 11 12367788899999999999
Q ss_pred hccCCCceeEEEeee-eeEEEEEc
Q 010250 417 AFSDSPIIGEIRGTG-LILGTEFA 439 (514)
Q Consensus 417 ~l~~~~~~~~v~g~g-~~~~i~~~ 439 (514)
++ +.+.. -+.| .++..+|.
T Consensus 325 ~l-g~~v~---~p~gayyl~adfs 344 (420)
T KOG0257|consen 325 EL-GLKVT---GPEGAYYLWADFS 344 (420)
T ss_pred hc-CCccc---cCCCceEEEEecc
Confidence 88 33322 2334 35566776
No 237
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.73 E-value=4.6e-15 Score=154.78 Aligned_cols=332 Identities=15% Similarity=0.139 Sum_probs=185.4
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHh-cCCcc---ccccccCCchHHHHHH----HHHHhcCcCCCCeEEEeCCh
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLN-TLPFY---HSFWNRTTKPSLDLAK----ELLEMFTASKMAKVFFTNSG 171 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~-~~~~~---~~~~~~~~~~~~ela~----~L~~~~~~~~~~~v~~~~sG 171 (514)
+.+|++.++-. . -+|+|++|+.+.+. ..+.. +..+.+ .+...++++ .++++++. ....+ +.+||
T Consensus 25 ~~~~~l~~~~n---~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~la~~~g~-~~~~i-~~~sg 96 (416)
T PRK00011 25 EEHIELIASEN---F--VSPAVMEAQGSVLTNKYAEGYPGKRYYGG-CEYVDVVEQLAIDRAKELFGA-EYANV-QPHSG 96 (416)
T ss_pred hcCeeeecccC---c--CCHHHHHHHhchhhcccccCCCCcccccc-chHHHHHHHHHHHHHHHHhCC-Cceee-ecCCc
Confidence 56788777632 2 48999999877653 22111 111111 122333433 66777643 33334 44679
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCccccee--eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCCh
Q 010250 172 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI--AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETE 249 (514)
Q Consensus 172 seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~--~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (514)
++|+..++.... .++++|++....|.+.... .....+.. .. +..++...
T Consensus 97 t~al~~~l~~l~--------~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g-----~~-----~~~~~~~~----------- 147 (416)
T PRK00011 97 SQANAAVYFALL--------KPGDTILGMDLAHGGHLTHGSPVNFSGKL-----YN-----VVSYGVDE----------- 147 (416)
T ss_pred hHHHHHHHHHhc--------CCCCEEEEeccccCCccccccccccccce-----ee-----EeecCcCc-----------
Confidence 999998887663 2346788888887653211 11111100 00 00011100
Q ss_pred hHHHHHHHHHHHHHHHHhCCCcEEEEEE-ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecc
Q 010250 250 EEYSTRLANNLEDLILKEGPETIAAFIA-EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDK 328 (514)
Q Consensus 250 ~~~~~~~~~~le~li~~~~~~~~aaviv-Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~ 328 (514)
+....+++++++++.+. ++.+|++ .+++ |...+ +++|.++|++||+++|+||+|. +|..+.......
T Consensus 148 -~~~~~d~~~l~~~i~~~---~~k~v~~~~~~~---~~~~~----~~~I~~la~~~~~~livD~a~~-~g~~~~g~~~~~ 215 (416)
T PRK00011 148 -ETGLIDYDEVEKLALEH---KPKLIIAGASAY---SRPID----FKRFREIADEVGAYLMVDMAHI-AGLVAAGVHPSP 215 (416)
T ss_pred -ccCCcCHHHHHHHHHhc---CCCEEEECCCcC---CCccC----HHHHHHHHHHcCCEEEEECcch-hcccccCccCCC
Confidence 00112357888877532 3344555 4433 43444 8999999999999999999986 333321100111
Q ss_pred cCCCCchh--chhhhhcCCcccceeEEeC-HHHHHHhhhccCCCCcccccCCCC-CcHHHHHHHH-HHHHHHhh--ccHH
Q 010250 329 YSIKPDLV--SFAKALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYS-GHPVSCAVAI-EALKIYKE--RNIV 401 (514)
Q Consensus 329 ~gv~pDiv--~~sK~l~gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~-~~pl~~aaa~-aal~~~~~--~~~~ 401 (514)
.+ ..|++ +++|+++| .+.|+++++ +++.+.+.... .. ++++ .....+++.. +.++.+++ ++..
T Consensus 216 ~~-~~di~~~S~~K~l~g--~~gg~i~~~~~~~~~~l~~~~------~~-~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~ 285 (416)
T PRK00011 216 VP-HADVVTTTTHKTLRG--PRGGLILTNDEELAKKINSAV------FP-GIQGGPLMHVIAAKAVAFKEALEPEFKEYA 285 (416)
T ss_pred CC-CCcEEEecCCcCCCC--CCceEEEeCCHHHHHHHHHHh------Cc-cccCCccHHHHHHHHHHHHHHHhhhHHHHH
Confidence 12 34665 56799965 678899985 68888876421 11 1121 1222333333 33343332 3467
Q ss_pred HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---------
Q 010250 402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--------- 472 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--------- 472 (514)
++++++++++++.|+++ ...+.. -...+.++.+.+.+... ....+.+.|.++||.+...
T Consensus 286 ~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~i~~~~~~~----------~~~~~~~~L~~~GI~v~~~~~p~~~~~~ 353 (416)
T PRK00011 286 QQVVKNAKALAEALAER-GFRVVS-GGTDNHLVLVDLRSKGL----------TGKEAEAALEEANITVNKNAVPFDPRSP 353 (416)
T ss_pred HHHHHHHHHHHHHHHhC-CCeeee-cCCCCeEEEEeCcccCC----------CHHHHHHHHHHcCcEEccCcCCCCCCCC
Confidence 88899999999999875 222211 00123555666542210 1345778888999998721
Q ss_pred --CCEEEEeCC----CCCCHHHHHHHHHHHHHHHHH
Q 010250 473 --GDNIMMSPP----FIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 473 --g~~iRi~p~----~~~t~e~id~~~~~l~~~l~~ 502 (514)
...+|+... ..+|++|++++++.|++++..
T Consensus 354 ~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 354 FVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred CCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 235898542 257899999999999988765
No 238
>PRK07908 hypothetical protein; Provisional
Probab=99.73 E-value=2.2e-15 Score=153.41 Aligned_cols=312 Identities=14% Similarity=0.172 Sum_probs=189.4
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ 178 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A 178 (514)
+..++||..|. +.++ .++.+++++.+.+.....|. ......++.+.++++++ .+.+++++++++++|+..+
T Consensus 21 ~~~~~~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~Y~-----~~~g~~~lr~aia~~~~-~~~~~I~it~Ga~~al~~~ 91 (349)
T PRK07908 21 GPGLLDFAVNV--RHDT-PPEWLRERLAARLGDLAAYP-----STEDERRARAAVAARHG-RTPDEVLLLAGAAEGFALL 91 (349)
T ss_pred CCCeEEecCCC--CCCC-CCHHHHHHHHHHhhHhhcCC-----CccchHHHHHHHHHHhC-cChhhEEECCCHHHHHHHH
Confidence 67899998763 3344 57889999998876532221 12234677788888774 4568999999999999887
Q ss_pred HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250 179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258 (514)
Q Consensus 179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (514)
++ .. + .++++..++|.+..... ...|.... .++....|. -
T Consensus 92 ~~-l~--------~--~~viv~~P~y~~~~~~~-~~~G~~i~------------~v~~~~~~~----------------~ 131 (349)
T PRK07908 92 AR-LR--------P--RRAAVVHPSFTEPEAAL-RAAGIPVH------------RVVLDPPFR----------------L 131 (349)
T ss_pred Hh-cC--------C--CeEEEeCCCChHHHHHH-HHcCCEEE------------eeccCcccC----------------c
Confidence 76 21 2 46777888887653221 11221111 011110011 0
Q ss_pred HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh--
Q 010250 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV-- 336 (514)
Q Consensus 259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv-- 336 (514)
+++. +. +++.++++-..++.+|.+.+ .++|.++|++ ++++|+||+|..| ..|.......... ++++
T Consensus 132 d~~~-l~----~~~~~i~l~np~NPTG~~~~----~~~l~~l~~~-~~~iIvDe~y~~~-~~~~~~~l~~~~~-~~~i~i 199 (349)
T PRK07908 132 DPAA-VP----DDADLVVIGNPTNPTSVLHP----AEQLLALRRP-GRILVVDEAFADA-VPGEPESLAGDDL-PGVLVL 199 (349)
T ss_pred ChhH-hc----cCCCEEEEcCCCCCCCCCcC----HHHHHHHHhc-CCEEEEECcchhh-ccCCccccccccC-CCEEEE
Confidence 1111 11 22345555334566777776 4678888865 7889999999866 2233211111111 3433
Q ss_pred -chhhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH--Hh-hccHHHHHHHHHHHH
Q 010250 337 -SFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI--YK-ERNIVEQVNKIAPKF 411 (514)
Q Consensus 337 -~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~--~~-~~~~~~~~~~~~~~l 411 (514)
+|||.++ .| +++|++++++++++.+.... ..+..+++..+++.+.++- .+ -+++.++++++.+++
T Consensus 200 ~S~SK~~~l~G-lRiG~~~~~~~~~~~~~~~~---------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l 269 (349)
T PRK07908 200 RSLTKTWSLAG-LRVGYALGAPDVLARLTRGR---------AHWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEM 269 (349)
T ss_pred eecccccCCcc-ceeeeeecCHHHHHHHHhcC---------CCCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 6799887 45 89999999999998887421 1233445555544443330 00 123466677777777
Q ss_pred HhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------CCEEEEeCCCCC
Q 010250 412 QDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------GDNIMMSPPFIM 484 (514)
Q Consensus 412 ~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------g~~iRi~p~~~~ 484 (514)
.+.|+++ ...+ .....|.++++.+.+ ...+...|.++||.+.++ .+.||++. .
T Consensus 270 ~~~L~~~-~~~~--~~p~~g~~~~~~~~~--------------~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~---~ 329 (349)
T PRK07908 270 VAGLRAV-GARV--VDPAAAPFVLVRVPD--------------AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAV---R 329 (349)
T ss_pred HHHHHhC-CcEe--ccCCCceEEEEECCc--------------HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEe---C
Confidence 7777764 2111 111347777777642 234778888999999864 25799993 5
Q ss_pred CHHHHHHHHHHHHHHHH
Q 010250 485 SPEEVDELISKYGKALK 501 (514)
Q Consensus 485 t~e~id~~~~~l~~~l~ 501 (514)
++++++++++.|++.+.
T Consensus 330 ~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 330 PRAEVPVLVQALAEILK 346 (349)
T ss_pred CCccHHHHHHHHHHHHh
Confidence 88899999999987653
No 239
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.72 E-value=1.8e-15 Score=157.16 Aligned_cols=342 Identities=11% Similarity=0.032 Sum_probs=192.6
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcccccc-ccCCchHHHHHHHHHHhc--CcCCCCeEEEeCChhHHH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFW-NRTTKPSLDLAKELLEMF--TASKMAKVFFTNSGSEAN 175 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~-~~~~~~~~ela~~L~~~~--~~~~~~~v~~~~sGseA~ 175 (514)
|..++|+..|. ..++ ..|.+.+++.+.+.+........ ..+.....+|.+.+++.+ .....+++++++|+++++
T Consensus 32 ~~~~i~l~~~~--~~~~-~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al 108 (402)
T TIGR03542 32 SADIIRLGIGD--TTQP-LPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDV 108 (402)
T ss_pred CCCeEEcCCCC--CCCC-CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHH
Confidence 67789987763 2343 47888999988876532110000 112233455666666643 124568999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250 176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255 (514)
Q Consensus 176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (514)
.....+. ..+++|++.+++|.+........+. +......+. ...+..+++... +.+
T Consensus 109 ~~l~~l~---------~~gd~Vlv~~P~y~~~~~~~~~~g~-~~~~~~~~~-~~~~~~v~~~~~----------~~~--- 164 (402)
T TIGR03542 109 FRLQSLF---------GSDNTVAVQDPVYPAYVDSNVMAGR-AGVLDDDGR-YSKITYLPCTKE----------NNF--- 164 (402)
T ss_pred HHHHHhc---------CCCCEEEEeCCCCcchHHHHHHcCC-ccccccccc-cceEEEeecchh----------hCC---
Confidence 8753322 2346799999999887543332221 100000000 000111111000 000
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-cee-cccCCCC
Q 010250 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGC-DKYSIKP 333 (514)
Q Consensus 256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~-~~~gv~p 333 (514)
..+++. . .++.+|++...++.+|.+ .+.+.+++|.++|++||+++|.||+|..|-..+.. ... ...+...
T Consensus 165 -~~~~~~-----~-~~~~~i~l~nP~NPTG~~-~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~ 236 (402)
T TIGR03542 165 -IPDLPE-----E-PKIDIIYLCSPNNPTGTV-LTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKE 236 (402)
T ss_pred -CCCccc-----c-CCceEEEEeCCCCCCCcc-CCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcc
Confidence 001111 1 233444443445666654 46788999999999999999999999987433211 111 1111111
Q ss_pred c---hhchhhhhcCCcccceeEEeCHHHH--------HHhhhccCCCCcccccCCC-CCcHHHHHHHHHHHHH--Hh-hc
Q 010250 334 D---LVSFAKALSSAYMPIGAILVSPEVS--------EVIHSQSNTLGSFSHGFTY-SGHPVSCAVAIEALKI--YK-ER 398 (514)
Q Consensus 334 D---iv~~sK~l~gG~~pig~v~~~~~i~--------~~l~~~~~~~~~~~~~~t~-~~~pl~~aaa~aal~~--~~-~~ 398 (514)
. +-+|||.++..++++|+++++++++ ..+.. ....++ +.+.+++.++.+.++. .. -.
T Consensus 237 ~vi~~~SfSK~~g~pGlRiG~~i~~~~l~~~~~~~~~~~~~~--------~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~ 308 (402)
T TIGR03542 237 CAIEFRSFSKTAGFTGVRLGWTVVPKELTYADGHSVIQDWER--------RQCTKFNGASYPVQRAAEAAYAGEGLQPIL 308 (402)
T ss_pred cEEEEecCccccCCCCcceEEEEecHHHhhcchhhHHHHHHH--------HhhhcccCCCHHHHHHHHHHHcCcchhHHH
Confidence 2 2378998874339999999998876 22211 011122 3566777666665542 11 11
Q ss_pred cHHHHHHHHHHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee----
Q 010250 399 NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS---- 472 (514)
Q Consensus 399 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~---- 472 (514)
+..+.++++.+.+.+.|++. + +....+ .|.++++.+.+... ...+...|+ +.||.+.++
T Consensus 309 ~~~~~~~~~~~~~~~~L~~~---~-~~~~~~~~~~f~~v~l~~~~~-----------~~~l~~~l~~~~gv~v~pg~~f~ 373 (402)
T TIGR03542 309 EAISYYMENARILRKALEAA---G-FKVYGGEHAPYLWVKTPEGIS-----------SWDFFDFLLYQYHVVGTPGSGFG 373 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhc---C-ceecCCCceeEEEEECCCCCC-----------HHHHHHHHHHhCCEEEeCchhhC
Confidence 23455666667777777664 2 111233 35677888753210 234667766 579999874
Q ss_pred ---CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 473 ---GDNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 473 ---g~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
.+++||+ +..+++++++++++|.++|
T Consensus 374 ~~~~~~iRis--~~~~~~~l~~~l~~l~~~~ 402 (402)
T TIGR03542 374 PSGEGFVRFS--AFGKRENIVEACERIKEAL 402 (402)
T ss_pred CCCCCEEEEE--ecCCHHHHHHHHHHHHhhC
Confidence 2469999 5668999999999998753
No 240
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.72 E-value=3.2e-15 Score=157.59 Aligned_cols=308 Identities=15% Similarity=0.132 Sum_probs=179.7
Q ss_pred chHHHHHHHHHHhcC---cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccc
Q 010250 144 KPSLDLAKELLEMFT---ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPAL 220 (514)
Q Consensus 144 ~~~~ela~~L~~~~~---~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~ 220 (514)
+....+++.+.+.++ ....++|++++|++++++.++.... ..++.|++.+++|.+.........|...
T Consensus 90 ~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~--------~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~- 160 (468)
T PLN02450 90 AFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLA--------EPGDAFLLPTPYYPGFDRDLKWRTGVEI- 160 (468)
T ss_pred HHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhC--------CCCCEEEECCCCCCchHHHHhhcCCcEE-
Confidence 344445555544322 1356789999999999998887653 3457899999999876432221122111
Q ss_pred cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh--CCCcEE-EEEEccccCCCCcccCChhHHHHH
Q 010250 221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIA-AFIAEPVIGAGGVIPPPATYFEKV 297 (514)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~--~~~~~a-avivEpv~~~~G~~~p~~~~L~~l 297 (514)
..+++... +.+. .+.+++++.+.+. ...++. .+++.|. +.+|.+ .+++.+++|
T Consensus 161 -----------v~v~~~~~----------~~~~-~~~~~le~~~~~~~~~~~~~k~v~l~nP~-NPTG~~-~s~e~l~~l 216 (468)
T PLN02450 161 -----------VPIHCSSS----------NGFQ-ITESALEEAYQQAQKLNLKVKGVLITNPS-NPLGTT-TTRTELNLL 216 (468)
T ss_pred -----------EEEecCCc----------cCCc-CCHHHHHHHHHHHHhcCCCeeEEEEecCC-CCCCcc-cCHHHHHHH
Confidence 11111000 0010 0135666665432 112344 5555565 455544 467899999
Q ss_pred HHHHHhcCCEEEEechhcCcccccccce--eccc------CC-CCc-hh---chhhhhc-CCcccceeEEeCHH-HHHHh
Q 010250 298 QAVVKKYDILFIADEVICAFGRLGTMFG--CDKY------SI-KPD-LV---SFAKALS-SAYMPIGAILVSPE-VSEVI 362 (514)
Q Consensus 298 ~~l~~~~gillI~DEv~tG~gr~G~~~~--~~~~------gv-~pD-iv---~~sK~l~-gG~~pig~v~~~~~-i~~~l 362 (514)
.++|++||+++|+||+|.++-..+..+. .... +. .++ ++ +|||.++ .| +++|+++++++ +++.+
T Consensus 217 l~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~G-lRiG~li~~~~~l~~~~ 295 (468)
T PLN02450 217 VDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPG-FRVGAIYSNDEMVVSAA 295 (468)
T ss_pred HHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCC-ccEEEEEECCHHHHHHH
Confidence 9999999999999999997644442221 1111 11 122 22 6899887 45 89999999754 55655
Q ss_pred hhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--h---ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEE
Q 010250 363 HSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--E---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTE 437 (514)
Q Consensus 363 ~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~ 437 (514)
... . .....+.+++.++.++|+.-. + ++..++++++.+.+.+.|+++ ..++. ...-|+++++.
T Consensus 296 ~~~-------~--~~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~--~~~~g~flwi~ 363 (468)
T PLN02450 296 TKM-------S--SFGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCL--KSNAGLFCWVD 363 (468)
T ss_pred HHH-------h--hcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccc--CCCceEEEEEE
Confidence 421 1 112245667777766664210 0 123556666677777777665 22221 12346688888
Q ss_pred EccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEeeC-------CEEEEeCCCC-CCHHHHHHHHHHHHHHHHHHH
Q 010250 438 FADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG-------DNIMMSPPFI-MSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g-------~~iRi~p~~~-~t~e~id~~~~~l~~~l~~~~ 504 (514)
+....... .......+...++ +.||.+.|+. +++|++ +. .+++++++++++|++++.+..
T Consensus 364 l~~~~~~~-----~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~--f~~~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 364 MRHLLKSN-----TFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVC--FANMSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred chHhcCcC-----CchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEE--ecCCCHHHHHHHHHHHHHHHHhcc
Confidence 75321110 0111223555555 5799998752 479999 66 489999999999999998766
No 241
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.72 E-value=4.2e-15 Score=154.44 Aligned_cols=333 Identities=18% Similarity=0.161 Sum_probs=185.8
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHh-cCCc---cccccccCC--chHHHH-HHHHHHhcCcCCCCeEEEeCChh
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLN-TLPF---YHSFWNRTT--KPSLDL-AKELLEMFTASKMAKVFFTNSGS 172 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~-~~~~---~~~~~~~~~--~~~~el-a~~L~~~~~~~~~~~v~~~~sGs 172 (514)
+++|++..+- ++ -+|+|++|+.+.+. +... .+..+.+.. +...++ ++.++++++. +... ++.+||+
T Consensus 19 ~~~~~~~~~~--~~---~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~-v~~~sgt 91 (402)
T cd00378 19 RETLELIASE--NF---TSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGA-EYAN-VQPHSGS 91 (402)
T ss_pred HhCeeeeccC--Cc---CCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCC-Ccee-eecCCcH
Confidence 5677776553 22 38999999987652 3211 112221111 122332 2345566642 2233 4445799
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee----eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCC
Q 010250 173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA----ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET 248 (514)
Q Consensus 173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~----~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (514)
+|+..++.... ..+++|++.++.|.+..... +...|.. +..++.+...
T Consensus 92 ~a~~~~l~~l~--------~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~------------~~~~~~~~~~-------- 143 (402)
T cd00378 92 QANLAVYFALL--------EPGDTIMGLDLSHGGHLTHGSFTKVSASGKL------------FESVPYGVDP-------- 143 (402)
T ss_pred HHHHHHHHHhc--------CCCCEEEEecCccCcccccccccccccccee------------EEEecCCcCc--------
Confidence 99999988764 23468999888886542211 1111110 0001111000
Q ss_pred hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechh-cCcccccccceec
Q 010250 249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVI-CAFGRLGTMFGCD 327 (514)
Q Consensus 249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~-tG~gr~G~~~~~~ 327 (514)
+ ....+++++++.+... +...++++.|.+ |...+ +++|.++|++||+++|+||+| .|+...|.. ..
T Consensus 144 -~-~~~id~~~l~~~i~~~--~~~~v~~~~~~~---~~~~~----~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~-~~- 210 (402)
T cd00378 144 -E-TGLIDYDALEKMALEF--KPKLIVAGASAY---PRPID----FKRFREIADEVGAYLLVDMAHVAGLVAGGVF-PN- 210 (402)
T ss_pred -c-cCCcCHHHHHHHHHhC--CCCEEEecCccc---CCCcC----HHHHHHHHHhcCCEEEEEccchhhhhhcccC-CC-
Confidence 0 0011257777777532 223344446644 33334 899999999999999999997 344222211 11
Q ss_pred ccCCCCchh--chhhhhcCCcccceeEEeCH-HHHHHhhhccCCCCcccccCCCCC-cHHHHHHHHHHHHHHhh---ccH
Q 010250 328 KYSIKPDLV--SFAKALSSAYMPIGAILVSP-EVSEVIHSQSNTLGSFSHGFTYSG-HPVSCAVAIEALKIYKE---RNI 400 (514)
Q Consensus 328 ~~gv~pDiv--~~sK~l~gG~~pig~v~~~~-~i~~~l~~~~~~~~~~~~~~t~~~-~pl~~aaa~aal~~~~~---~~~ 400 (514)
... ..|++ +++|+++| .+.|++++++ ++++.+.... ..+.++. ++...+++..++....+ ++.
T Consensus 211 ~~~-~~dv~~~s~sK~l~G--~~gg~i~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~ 280 (402)
T cd00378 211 PLP-GADVVTTTTHKTLRG--PRGGLILTRKGELAKKINSAV-------FPGLQGGPHLHVIAAKAVALKEALEPEFKAY 280 (402)
T ss_pred ccc-CCcEEEeccccCCCC--CCceEEEeccHHHHHHHHHHh-------CccccCCchHHHHHHHHHHHHHHhhHHHHHH
Confidence 111 34765 57799954 6889999876 8888875421 1111221 22233333333433322 346
Q ss_pred HHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe---------
Q 010250 401 VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV--------- 471 (514)
Q Consensus 401 ~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~--------- 471 (514)
.+++.++.+++.+.|+++ ....... ...+.++++.+.+... ....+.+.|.++||.+.+
T Consensus 281 ~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~v~v~~~~~~~----------~~~~~~~~l~~~gI~v~~~~~p~~~~~ 348 (402)
T cd00378 281 AKQVVENAKALAEALKER-GFKVVSG-GTDNHLVLVDLRPKGI----------TGKAAEDALEEAGITVNKNTLPWDPSS 348 (402)
T ss_pred HHHHHHHHHHHHHHHHhC-CCeEeec-CCCCeEEEEeCCccCC----------CHHHHHHHHHHcCcEEcCCcCCCCCCC
Confidence 677888889999988875 3222211 1235666677653211 023466678889999962
Q ss_pred --eCCEEEEeCCCC----CCHHHHHHHHHHHHHHHHH
Q 010250 472 --SGDNIMMSPPFI----MSPEEVDELISKYGKALKA 502 (514)
Q Consensus 472 --~g~~iRi~p~~~----~t~e~id~~~~~l~~~l~~ 502 (514)
..+.+|+++... ++++||+++++.|.+++.+
T Consensus 349 ~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 349 PFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred CCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 124699987653 4799999999999998754
No 242
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.71 E-value=5.8e-15 Score=142.62 Aligned_cols=346 Identities=16% Similarity=0.121 Sum_probs=206.9
Q ss_pred CEEEEccCCcccccCCC--CCHHHHHHHHHHHhcCCc--cccccccCCchHHHHHHHHHHhcCc-CCCCeEEEeCChhHH
Q 010250 100 KKYLDSLAGLWCTALGG--SEPRLVAAATAQLNTLPF--YHSFWNRTTKPSLDLAKELLEMFTA-SKMAKVFFTNSGSEA 174 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh--~~p~v~~A~~~~l~~~~~--~~~~~~~~~~~~~ela~~L~~~~~~-~~~~~v~~~~sGseA 174 (514)
|.+|-+..|..+ .+|- ..++..+|+.+++..+.+ |.+. -+........|+++....+. -..+.|++|++.++|
T Consensus 61 k~iipl~~GDPs-v~~~~~ts~~a~~Av~~al~Sgk~N~Yaps-~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qA 138 (447)
T KOG0259|consen 61 KPILPLGHGDPS-VYPCFRTSQEAEQAVVDALRSGKGNGYAPS-VGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQA 138 (447)
T ss_pred ceeccCCCCCCC-ccccccCCHHHHHHHHHHHhcCCCCCcCCc-cccHHHHHHHHHHhhcCCCCccCcCceEEeccchHH
Confidence 466666555442 2332 467899999999976432 2111 12333445556665444422 245789999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250 175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254 (514)
Q Consensus 175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
+|.++.... ..+..|+...++|.=+...+.. ++..... |+. +|..+ -.
T Consensus 139 Ie~~i~~LA--------~p~aNILlPrPGfp~Y~~~a~~-~~lEVR~--ydl-----------------LPe~~----we 186 (447)
T KOG0259|consen 139 IELAISSLA--------NPGANILLPRPGFPLYDTRAIY-SGLEVRY--YDL-----------------LPEKD----WE 186 (447)
T ss_pred HHHHHHHhc--------CCCCceecCCCCCchHHHhhhh-cCceeEe--ecc-----------------cCccc----ce
Confidence 999998653 3457899999999654322221 1111111 111 11111 12
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eecccC-CC
Q 010250 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYS-IK 332 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~g-v~ 332 (514)
.|++.+|.++.+ +++|.||++|.+..|++. +.+-|++|.++|+|+|+++|+||||..+-..++.| ....+. +.
T Consensus 187 IDL~~veal~DE---NT~AivviNP~NPcGnVy--s~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiV 261 (447)
T KOG0259|consen 187 IDLDGVEALADE---NTVAIVVINPNNPCGNVY--SEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIV 261 (447)
T ss_pred echHHHHHhhcc---CeeEEEEeCCCCCCcccc--cHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccC
Confidence 336778887753 678999999998888655 66889999999999999999999998664444443 222232 33
Q ss_pred Cchh--chhhhhcCCcccceeEEeCHH--------HHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH--
Q 010250 333 PDLV--SFAKALSSAYMPIGAILVSPE--------VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI-- 400 (514)
Q Consensus 333 pDiv--~~sK~l~gG~~pig~v~~~~~--------i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~-- 400 (514)
|-|. .+||..--.+|++|+++..+. +++.+.. ...-+.+.+.+-++|.-.-|+... +++
T Consensus 262 PVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~--------~~~~~~~p~TiiQ~AlP~IL~kTp-~efF~ 332 (447)
T KOG0259|consen 262 PVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKN--------FLDIIPGPATIIQGALPDILEKTP-EEFFD 332 (447)
T ss_pred ceEeecccccccccCCceeeeEEEecccccccchHHHHHHHH--------HHhccCCccHhHHHHhHHHHHhCh-HHHHH
Confidence 4332 256854444499999887431 2233332 111233333333333322222211 222
Q ss_pred --HHHHHHHHHHHHhhhhhccCCCcee-EEEeeeeeEEE-EEccCCCCCCCCCCccchHHHHHHHH-HHCCcEEEee---
Q 010250 401 --VEQVNKIAPKFQDGVKAFSDSPIIG-EIRGTGLILGT-EFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVS--- 472 (514)
Q Consensus 401 --~~~~~~~~~~l~~~L~~l~~~~~~~-~v~g~g~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~--- 472 (514)
..-++.+.+...+.|+++ |.+. .++..|.|+-+ .+.-+ .++...+ ...|+.+| .|+.+++-|+
T Consensus 333 k~~~~lk~na~l~y~~Lk~I---P~l~cp~kPeg~mylmv~l~~s-----~~~~~~d-D~dFc~kL~~Eesv~~LPG~af 403 (447)
T KOG0259|consen 333 KKLSFLKSNADLCYSRLKDI---PCLTCPVKPEGCMYLMVKLNLS-----LFPDIED-DVDFCQKLAREESVICLPGQAF 403 (447)
T ss_pred HHHHHHHhhHHHHHHHHhcC---CCcccCcCCCcceEEEeccchh-----hhccccc-cHHHHHHHhhhcceEEeccccc
Confidence 455777777788888776 5444 56667765433 22111 1111111 12245544 5778888875
Q ss_pred --CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 473 --GDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 473 --g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
.+++|++ +....+.+++++++|++...+..
T Consensus 404 ~~~nw~Ri~--i~~~~~~leea~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 404 GLKNWLRIV--ITVEEEMLEEAFSRIKEFCDRHS 435 (447)
T ss_pred cCCCeEEEE--EccChHHHHHHHHHHHHHHHhhh
Confidence 3789999 88999999999999999987765
No 243
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.71 E-value=1.9e-15 Score=154.66 Aligned_cols=288 Identities=15% Similarity=0.186 Sum_probs=176.2
Q ss_pred HHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCC
Q 010250 146 SLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFD 225 (514)
Q Consensus 146 ~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~ 225 (514)
..+|.+.|+++++ ...++|++++|+++++..++.... .++++.|++.+++|......+.. .|...
T Consensus 61 ~~~lr~~ia~~~~-~~~~~I~~t~G~~~~l~~~~~~~~-------~~g~~~vlv~~p~y~~~~~~~~~-~g~~~------ 125 (364)
T PRK04781 61 PPGLRSALAALYG-CAPEQLLIGRGSDEAIDLLVRALC-------VPGRDAVLVTPPVFGMYAVCARL-QNAPL------ 125 (364)
T ss_pred HHHHHHHHHHHhC-cChHHEEEeCCHHHHHHHHHHHhc-------CCCCCeEEEcCCChHHHHHHHHH-cCCEE------
Confidence 4678888888874 456789999999999999887653 13335788878877543221111 11111
Q ss_pred CCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC
Q 010250 226 LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD 305 (514)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~g 305 (514)
..++..+. . +.+. .+.+++++... . .++.+|++...++.+|.+.+ .+.++++.+.|+ ++
T Consensus 126 ------~~v~~~~~------~---~~~~-~d~~~l~~~~~--~-~~~~lv~l~~p~NPTG~~~~-~~~~~~l~~~~~-~~ 184 (364)
T PRK04781 126 ------VEVPLVDG------A---DGFH-ADVPAIVAAAL--A-SNAKLVFLCSPSNPAGSAIA-LDQIERALQALQ-GK 184 (364)
T ss_pred ------EEEecCCC------c---cCCC-cCHHHHHHHHh--c-cCCeEEEEcCCCCCCCCCcC-HHHHHHHHHhCC-CC
Confidence 11111000 0 0000 01233332221 1 24455555556677787765 455666666664 48
Q ss_pred CEEEEechhcCcccccccceecccCCCCchh---chhhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCc
Q 010250 306 ILFIADEVICAFGRLGTMFGCDKYSIKPDLV---SFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 381 (514)
Q Consensus 306 illI~DEv~tG~gr~G~~~~~~~~gv~pDiv---~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~ 381 (514)
+++|+||++..|...... ....+..+.++ +|||.++ .| +++|++++++++++.+... ...++.+
T Consensus 185 ~~iI~Deay~~f~~~~~~--~~~~~~~~~vi~~~SfSK~~gl~G-lRvGy~v~~~~l~~~l~~~---------~~~~~~~ 252 (364)
T PRK04781 185 ALVVVDEAYGEFSDVPSA--VGLLARYDNLAVLRTLSKAHALAA-ARIGSLIANAELIAVLRRC---------QAPYPVP 252 (364)
T ss_pred cEEEEeCcchhhcCCcch--HHHHhhCCCEEEEecChhhccccc-ceeeeeeCCHHHHHHHHhc---------cCCCCCC
Confidence 999999999877422111 11122234444 7899887 45 8999999999999988742 1345667
Q ss_pred HHHHHHHHHHHHHH--hh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHH
Q 010250 382 PVSCAVAIEALKIY--KE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYF 458 (514)
Q Consensus 382 pl~~aaa~aal~~~--~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~ 458 (514)
.+++.++.++|+.- .. .+..+.+++.++.+.+.|+.+.. +.......|.++++++.+ ...+
T Consensus 253 ~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~--~~~~~p~~g~f~~~~~~~--------------~~~~ 316 (364)
T PRK04781 253 TPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPG--VRRVYPSQGNFLLVRFDD--------------AEAA 316 (364)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCC--CCeECCCCCcEEEEEcCC--------------HHHH
Confidence 77777777766531 11 12344566677778888876522 111234567888887741 2357
Q ss_pred HHHHHHCCcEEEee------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 459 GAQCEKHGMLVRVS------GDNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 459 ~~~l~~~Gv~~~~~------g~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
.+.|.++||.++++ ++++||+ ..++++.++++++|++..
T Consensus 317 ~~~l~~~gI~v~~~~~~~~~~~~~Ris---~~~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 317 FQALLAAGVVVRDQRAAPRLSDALRIT---LGTPEQNDRVLAALQRTQ 361 (364)
T ss_pred HHHHHHCCeEEeeCCCCCCCCCeEEEe---CCCHHHHHHHHHHHHHHH
Confidence 78899999999875 2479999 467899999999988754
No 244
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.71 E-value=1.8e-15 Score=153.85 Aligned_cols=288 Identities=15% Similarity=0.124 Sum_probs=163.3
Q ss_pred CchHHHHHHHHHHhcCcC-CCCeEEEeCChhHHHHHHHHHHHHHHhh-----cCCCCccEEEEEecCCcccceeeeecCC
Q 010250 143 TKPSLDLAKELLEMFTAS-KMAKVFFTNSGSEANDTQVKLVWYYNNA-----LGRPNKKKFIARQKSYHGSTLIAASLSG 216 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~-~~~~v~~~~sGseA~~~Alk~a~~~~~~-----~~~~~~~~ii~~~~~yHG~t~~~~~~s~ 216 (514)
.+...+++++++++++.. ..+.++|++||++|+..++..++..... ...++.+.+|+.+...|.....+....+
T Consensus 37 ~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g 116 (345)
T cd06450 37 TEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLD 116 (345)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHh
Confidence 444555666677776432 2347999999999999999988642110 0012233466666666665433322222
Q ss_pred CccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCChhHH
Q 010250 217 LPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYF 294 (514)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L 294 (514)
... ..+++...+ ..++++|++.+.+. ...++.++++.-.++..|.+.+ +
T Consensus 117 ~~~------------~~v~~~~~~-------------~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~----~ 167 (345)
T cd06450 117 VKV------------RLVPVDEDG-------------RMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP----L 167 (345)
T ss_pred cCe------------EEeeeCCCC-------------CcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC----H
Confidence 211 111111100 12257777777541 1113445554444555787765 9
Q ss_pred HHHHHHHHhcCCEEEEechhcCcccccccceecccCC-CCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCc
Q 010250 295 EKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI-KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS 371 (514)
Q Consensus 295 ~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv-~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~ 371 (514)
++|.++|++||+++|+|++|.++............++ ..|.+ +++|.++++ +++|+++.+
T Consensus 168 ~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p-~g~g~~~~~---------------- 230 (345)
T cd06450 168 EEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVP-LGCSAVLVR---------------- 230 (345)
T ss_pred HHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCC-cchHHHHHH----------------
Confidence 9999999999999999999985421111000001111 24644 567987765 455544433
Q ss_pred ccccCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCC
Q 010250 372 FSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPF 448 (514)
Q Consensus 372 ~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~ 448 (514)
..+..++++.+.. ++..++..++.+++.+.|+++....++. ...+.++.+.+.+....
T Consensus 231 -------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~iv~f~~~~~~~~---- 291 (345)
T cd06450 231 -------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLG--EPNLSLVCFRLKPSVKL---- 291 (345)
T ss_pred -------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCceeEEEEEECCcchh----
Confidence 2222333443332 3456777788888888887763222211 12345666665432000
Q ss_pred CCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCC-CHHHHHHHHHHHHH
Q 010250 449 PPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIM-SPEEVDELISKYGK 498 (514)
Q Consensus 449 ~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~-t~e~id~~~~~l~~ 498 (514)
. .....+.+.|.++|+++.+. +..+|+++...+ |++|+|++++.|++
T Consensus 292 --~-~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 292 --D-ELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred --h-HHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 0 01345778899996554432 346999988765 99999999999875
No 245
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.71 E-value=1.9e-14 Score=151.04 Aligned_cols=345 Identities=18% Similarity=0.208 Sum_probs=215.3
Q ss_pred CCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCccccccc----cCCchHHHHHHHHHHhcC-cCCCCeEEEeCC
Q 010250 97 VNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFYHSFWN----RTTKPSLDLAKELLEMFT-ASKMAKVFFTNS 170 (514)
Q Consensus 97 ~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~~~~~~----~~~~~~~ela~~L~~~~~-~~~~~~v~~~~s 170 (514)
.+....+||..|.. .+ .+ ....+.+++.+.+........... +..++...+++++....+ ....++|++|++
T Consensus 86 ~~~~~~i~f~~g~p-~~-~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G 163 (459)
T COG1167 86 EDDPSVIDFAGGLP-DP-SLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSG 163 (459)
T ss_pred cCCCceecCCCCCC-Cc-ccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCC
Confidence 45567899887752 22 22 344566666665543221111112 223344445555542221 235579999999
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChh
Q 010250 171 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 250 (514)
Q Consensus 171 GseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (514)
..+|++..+++.. ..++.|++=+++|++........ |.. +..++..+ .+
T Consensus 164 ~q~al~l~~~~l~--------~pGd~v~vE~PtY~~~~~~~~~~-g~~------------~~~vp~d~------~G---- 212 (459)
T COG1167 164 AQQALDLLLRLLL--------DPGDTVLVEDPTYPGALQALEAL-GAR------------VIPVPVDE------DG---- 212 (459)
T ss_pred HHHHHHHHHHHhC--------CCCCEEEEcCCCcHHHHHHHHHc-CCc------------EEecCCCC------CC----
Confidence 9999999888774 34578888899999864222211 110 11111110 01
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eecc
Q 010250 251 EYSTRLANNLEDLILKEGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDK 328 (514)
Q Consensus 251 ~~~~~~~~~le~li~~~~~~~~aavivEpv-~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~ 328 (514)
.++++||+.+... ++.++.+.|. |+.+|...+ .+==++|.++|++||+++|=|+.+.-|-..+..- ....
T Consensus 213 ----~~~e~le~~~~~~---~~k~~y~~P~~qNPtG~tms-~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ 284 (459)
T COG1167 213 ----IDPEALEEALAQW---KPKAVYVTPTFQNPTGVTMS-LERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKA 284 (459)
T ss_pred ----CCHHHHHHHHhhc---CCcEEEECCCCCCCCCCccC-HHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHh
Confidence 1157788877642 5778888886 677887664 4566789999999999999999999775444322 1111
Q ss_pred cCCCCc----hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH--Hhh--ccH
Q 010250 329 YSIKPD----LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI--YKE--RNI 400 (514)
Q Consensus 329 ~gv~pD----iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~--~~~--~~~ 400 (514)
+. .++ +-+|||.|+=| +++|++++++++++.+... .+..+.+.+.+.+.+...-+.. +.+ ..+
T Consensus 285 ld-~~~rViy~gSFSK~l~Pg-lRlG~vv~p~~~~~~~~~~-------k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~l 355 (459)
T COG1167 285 LD-APGRVIYLGSFSKTLAPG-LRLGYVVAPPELIEKLLRL-------KQAADLGPSSLSQAALAAFLLSGHYDRHLRRL 355 (459)
T ss_pred hC-CCCCEEEEeeehhhcccc-cceeeeeCCHHHHHHHHHH-------HHHhcCCCChHHHHHHHHHHHcCCHHHHHHHH
Confidence 11 123 33799999988 8999999999998888642 3445666666665555443431 111 234
Q ss_pred HHHHHHHHHHHHhhhhhccCCCceeE-EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC------
Q 010250 401 VEQVNKIAPKFQDGVKAFSDSPIIGE-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG------ 473 (514)
Q Consensus 401 ~~~~~~~~~~l~~~L~~l~~~~~~~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g------ 473 (514)
...++++.+.+.+.|++... +.... ...-|+++++.+++.-. ...+.+.++++|+.+.+.|
T Consensus 356 R~~y~~rr~~l~~~L~~~~~-~~~~~~~p~gG~flwl~l~~~~~-----------~~~l~~~a~~~gv~i~~~g~~f~~~ 423 (459)
T COG1167 356 RREYARRRDALLEALAEYLP-ELATWTRPEGGLFLWLELPEGID-----------ARELLAAALEKGVVVTPLGSAFSAD 423 (459)
T ss_pred HHHHHHHHHHHHHHHHHhCC-CCeeeecCCceEEEEEEcCCCCC-----------HHHHHHHHHHCCCEEEcCCccccCC
Confidence 55555666666666665411 12222 23338899999876421 4568899999999998732
Q ss_pred ----CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 474 ----DNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 474 ----~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
+.+||+.. ..++++|++++.+|.+++.+..
T Consensus 424 ~~~~~~~Rl~~s-~~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 424 GDPRNGLRLSFS-SPSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred CCCCCeEEEEcC-CCCHHHHHHHHHHHHHHHHHHh
Confidence 47999964 4568999999999999987653
No 246
>PRK14012 cysteine desulfurase; Provisional
Probab=99.70 E-value=2e-14 Score=149.43 Aligned_cols=337 Identities=18% Similarity=0.187 Sum_probs=188.5
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHh--c-CCcccc---ccc-cCCchHHHHHHHHHHhcCcCCCCeEEEeCChh
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLN--T-LPFYHS---FWN-RTTKPSLDLAKELLEMFTASKMAKVFFTNSGS 172 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~--~-~~~~~~---~~~-~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGs 172 (514)
+.|||..+. +.-++.+.+++.+.+. . ....+. ... ...+...++.+.++++++ .+.+.++|++||+
T Consensus 4 ~iyld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g-~~~~~v~~~~g~t 76 (404)
T PRK14012 4 PIYLDYSAT------TPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIG-ADPREIVFTSGAT 76 (404)
T ss_pred eEEecCcCC------CCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcC-cCcCeEEEeCCHH
Confidence 468886544 4468899999988875 2 111110 000 012345567788888874 3456799999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeec--CCCccccCCCCCCCCcccccCCCCcccCCCCCCChh
Q 010250 173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL--SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 250 (514)
Q Consensus 173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (514)
+|+..+++.+.... . +.++.||+.+..|+........+ .|.. +..++.++.+
T Consensus 77 ~al~~~l~~l~~~~---~-~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~------------~~~v~~~~~g---------- 130 (404)
T PRK14012 77 ESDNLAIKGAAHFY---Q-KKGKHIITSKTEHKAVLDTCRQLEREGFE------------VTYLDPQSNG---------- 130 (404)
T ss_pred HHHHHHHHHHHHhh---c-CCCCEEEEecCccHHHHHHHHHHHhCCCE------------EEEEccCCCC----------
Confidence 99999987663211 0 23456777666654432111111 1111 0111111110
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccC
Q 010250 251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS 330 (514)
Q Consensus 251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~g 330 (514)
..+++++++++. +++.+|++..+++.+|.+.| +++|.++|++||+++|+|++|+ +|... ++...
T Consensus 131 ---~~d~~~l~~~i~----~~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~vivD~a~~-~g~~~----~~~~~ 194 (404)
T PRK14012 131 ---IIDLEKLEAAMR----DDTILVSIMHVNNEIGVIQD----IAAIGEICRERGIIFHVDAAQS-VGKVP----IDLSK 194 (404)
T ss_pred ---cCCHHHHHHhcC----CCCEEEEEECcCCCccchhh----HHHHHHHHHHcCCEEEEEcchh-cCCcc----cCccc
Confidence 012567777764 35678888888888998887 8999999999999999999997 54331 12223
Q ss_pred CCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccC---CCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHH
Q 010250 331 IKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSN---TLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQ 403 (514)
Q Consensus 331 v~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~---~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~ 403 (514)
..+|++++| |.++ + .++|+++++++....+.+... ....+. .+| .+.....+..++++.++. ++..++
T Consensus 195 ~~~D~~~~s~~K~~g-p-~g~G~l~~~~~~~~~~~~~~~g~~~~~~~~-~gt--~~~~~~~~l~~al~~~~~~~~~~~~~ 269 (404)
T PRK14012 195 LKVDLMSFSAHKIYG-P-KGIGALYVRRKPRVRLEAQMHGGGHERGMR-SGT--LPTHQIVGMGEAARIAKEEMATENER 269 (404)
T ss_pred CCCCEEEEehhhccC-C-CceEEEEEecCCCCCCCceecCCCccCCcc-CCC--cCHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 457888776 9654 3 357888888764333321000 000011 112 122223333345554432 235677
Q ss_pred HHHHHHHHHhhhhhccCCCceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE------------
Q 010250 404 VNKIAPKFQDGVKAFSDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR------------ 470 (514)
Q Consensus 404 ~~~~~~~l~~~L~~l~~~~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~------------ 470 (514)
.+++.+++.+.|+++....+..... .......+.|.... ...+...|. ++.+.
T Consensus 270 ~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~--~~~i~~g~~~~~~~~~~ 335 (404)
T PRK14012 270 IRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVE------------GESLIMALK--DLAVSSGSACTSASLEP 335 (404)
T ss_pred HHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcC------------HHHHHHhCC--CeEEEchhhhCCCCCCC
Confidence 7888888888887652211111100 11111122221110 112333332 22221
Q ss_pred ------------eeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 471 ------------VSGDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 471 ------------~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
...+.||+++....|++|+|++++.|+++++.+.
T Consensus 336 ~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~ 381 (404)
T PRK14012 336 SYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLR 381 (404)
T ss_pred CHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1125699999999999999999999999987764
No 247
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.70 E-value=8.6e-15 Score=146.32 Aligned_cols=326 Identities=18% Similarity=0.237 Sum_probs=206.6
Q ss_pred CHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEE
Q 010250 118 EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF 197 (514)
Q Consensus 118 ~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~i 197 (514)
+|+|++|+.+..-. +.+..| .....+..+.|...+...+.+-+++..||+-|+|+|+.... ++.++|
T Consensus 17 ~~~V~~am~~~~~~--h~s~~F---~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~--------~pgdkV 83 (383)
T COG0075 17 PPRVLLAMARPMVG--HRSPDF---VGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLV--------EPGDKV 83 (383)
T ss_pred CHHHHHHhcCCCCC--CCCHHH---HHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhcc--------CCCCeE
Confidence 67888877665422 222211 25567778888888854444567778999999999997664 446789
Q ss_pred EEEecCCcccceeeeec-CCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 010250 198 IARQKSYHGSTLIAASL-SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFI 276 (514)
Q Consensus 198 i~~~~~yHG~t~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavi 276 (514)
++..++..|....-+.- -|.+. ..+.++ |.... +++++++.+.+. +++.+|.
T Consensus 84 Lv~~nG~FG~R~~~ia~~~g~~v------------~~~~~~--wg~~v-----------~p~~v~~~L~~~--~~~~~V~ 136 (383)
T COG0075 84 LVVVNGKFGERFAEIAERYGAEV------------VVLEVE--WGEAV-----------DPEEVEEALDKD--PDIKAVA 136 (383)
T ss_pred EEEeCChHHHHHHHHHHHhCCce------------EEEeCC--CCCCC-----------CHHHHHHHHhcC--CCccEEE
Confidence 99888888864332211 11111 111111 11111 157888888743 3454555
Q ss_pred EccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeEEe
Q 010250 277 AEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILV 354 (514)
Q Consensus 277 vEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~ 354 (514)
+-..-.++|++.| +++|.++|++||+++|+|-|-+ +| |..+-.+.||+ |+++-| |+|++. -.+|.+..
T Consensus 137 ~vH~ETSTGvlnp----l~~I~~~~k~~g~l~iVDaVsS-~G--g~~~~vd~wgi--Dv~itgSQK~l~~P-PGla~v~~ 206 (383)
T COG0075 137 VVHNETSTGVLNP----LKEIAKAAKEHGALLIVDAVSS-LG--GEPLKVDEWGI--DVAITGSQKALGAP-PGLAFVAV 206 (383)
T ss_pred EEeccCcccccCc----HHHHHHHHHHcCCEEEEEeccc-CC--CcccchhhcCc--cEEEecCchhccCC-CccceeEE
Confidence 5444456688887 9999999999999999999976 64 33556677777 666544 999985 45788999
Q ss_pred CHHHHHHhhhccCC---CC------cccc-cCCCCCcHH-HHHHHHHHHHHHhhcc---HHHHHHHHHHHHHhhhhhccC
Q 010250 355 SPEVSEVIHSQSNT---LG------SFSH-GFTYSGHPV-SCAVAIEALKIYKERN---IVEQVNKIAPKFQDGVKAFSD 420 (514)
Q Consensus 355 ~~~i~~~l~~~~~~---~~------~~~~-~~t~~~~pl-~~aaa~aal~~~~~~~---~~~~~~~~~~~l~~~L~~l~~ 420 (514)
+++..+.+...... .. .+.. +.+....|. ...+..++|+.+.+++ ..++.+++++.++++++++ .
T Consensus 207 S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-G 285 (383)
T COG0075 207 SERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-G 285 (383)
T ss_pred CHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 99999888764322 00 0111 223333344 4555568898887754 5788888999999999987 2
Q ss_pred CCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCCCHHHHHHHHH
Q 010250 421 SPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSPEEVDELIS 494 (514)
Q Consensus 421 ~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~t~e~id~~~~ 494 (514)
..+..+. .....+..+..+.... ..+.....+.+.|+.+..+ |..+||.-.-..+.+++..++.
T Consensus 286 l~~~~~~~~~s~tvta~~~P~g~~----------~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ 355 (383)
T COG0075 286 LELFADPERRSPTVTAIKVPEGVD----------DKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALA 355 (383)
T ss_pred CccccCcccCCCceEEEECCCCCC----------cHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHH
Confidence 2222111 1122333444433211 1122333344458877643 4689999998999999999999
Q ss_pred HHHHHHHHHH
Q 010250 495 KYGKALKATE 504 (514)
Q Consensus 495 ~l~~~l~~~~ 504 (514)
+|+.+|.++.
T Consensus 356 ale~~L~~~g 365 (383)
T COG0075 356 ALEAALRELG 365 (383)
T ss_pred HHHHHHHHcC
Confidence 9999998764
No 248
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.69 E-value=4.2e-15 Score=151.67 Aligned_cols=280 Identities=15% Similarity=0.163 Sum_probs=169.1
Q ss_pred HHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCC
Q 010250 146 SLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFD 225 (514)
Q Consensus 146 ~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~ 225 (514)
..+|.+.+++.+ +...++|+++++++|++..+++... .++++.|++.+++|..+...+... |...
T Consensus 62 ~~~Lr~aia~~~-~~~~~~I~it~Gs~~~i~~~~~~~~-------~~g~d~vlv~~P~y~~y~~~~~~~-g~~v------ 126 (354)
T PRK04635 62 PPELINAYSAYA-GVAPEQILTSRGADEAIELLIRAFC-------EPGQDSIACFGPTYGMYAISAETF-NVGV------ 126 (354)
T ss_pred HHHHHHHHHHHh-CcCHHHEEEeCCHHHHHHHHHHHhc-------CCCCCeEEEcCCChHHHHHHHHHc-CCEE------
Confidence 467888888876 3467899999999999999987652 234468999999997654322111 1111
Q ss_pred CCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC
Q 010250 226 LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD 305 (514)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~g 305 (514)
..++....|.. +.+.+++ + + ++.+|++...++.+|.+.+ .+.+++|.+.|+ +
T Consensus 127 ------~~v~~~~~~~~-------------~~~~l~~-~----~-~~~li~i~nP~NPTG~~~~-~~~l~~l~~~~~--~ 178 (354)
T PRK04635 127 ------KALPLTADYQL-------------PLDYIEQ-L----D-GAKLVFICNPNNPTGTVID-RADIEQLIEMTP--D 178 (354)
T ss_pred ------EEEecCCCCCC-------------CHHHHHh-c----c-CCCEEEEeCCCCCCCccCC-HHHHHHHHHhCC--C
Confidence 11111111110 1233432 1 1 3444444455666777665 344555555544 5
Q ss_pred CEEEEechhcCcccccccceecccCCCCchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcH
Q 010250 306 ILFIADEVICAFGRLGTMFGCDKYSIKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 382 (514)
Q Consensus 306 illI~DEv~tG~gr~G~~~~~~~~gv~pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~p 382 (514)
+++|+||+|..|... .. ..+.....+.++ +|||.++-+++++|++++++++++.+... . ..++.+.
T Consensus 179 ~~vivDeay~~~~~~-~s-~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~~~l~~~-------~--~~~~~~~ 247 (354)
T PRK04635 179 AIVVVDEAYIEFCPE-YS-VADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELIEILMRV-------I--APYPVPL 247 (354)
T ss_pred cEEEEeCchHhhccC-cc-hHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHHHHHHHhh-------c--CCCCCCH
Confidence 999999999877421 11 111111123333 78998863228999999999999887631 1 2344555
Q ss_pred HHHHHHHHHHHHH--hh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHH
Q 010250 383 VSCAVAIEALKIY--KE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFG 459 (514)
Q Consensus 383 l~~aaa~aal~~~--~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 459 (514)
....++.++|+.. +. ++..+.+++.++.+.+.|+++ +.+......|.++.+.+.+ ...+.
T Consensus 248 ~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~---~~~~~~~~~g~f~~~~~~~--------------~~~~~ 310 (354)
T PRK04635 248 PVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMY---GGAKVLEGNGNYVLAKFDD--------------VDAVF 310 (354)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhC---CCceECCCCCcEEEEECCC--------------HHHHH
Confidence 5666666666421 11 123445666667777777765 2122223446666666531 23477
Q ss_pred HHHHHCCcEEEee-----CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250 460 AQCEKHGMLVRVS-----GDNIMMSPPFIMSPEEVDELISKYGKA 499 (514)
Q Consensus 460 ~~l~~~Gv~~~~~-----g~~iRi~p~~~~t~e~id~~~~~l~~~ 499 (514)
+.|.++||.++.. ++.+|++ ..+++|+++++++|++.
T Consensus 311 ~~l~~~gv~v~~~~~~~~~~~lRis---~~~~e~~~~l~~al~~~ 352 (354)
T PRK04635 311 KALWDAGIVARAYKDPRLANCIRFS---FSNRAETDKLIGLIRNQ 352 (354)
T ss_pred HHHHHCCEEEEECCCCCCCCeEEEE---eCCHHHHHHHHHHHHHh
Confidence 8889999999754 2469999 46899999999998753
No 249
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.68 E-value=1.4e-14 Score=151.94 Aligned_cols=326 Identities=13% Similarity=0.076 Sum_probs=189.0
Q ss_pred CCHHHHHHHHHHH-hcCCcc---ccccccCCchHHHHHH----HHHHhcCcCCCCeEEE---eCChhHHHHHHHHHHHHH
Q 010250 117 SEPRLVAAATAQL-NTLPFY---HSFWNRTTKPSLDLAK----ELLEMFTASKMAKVFF---TNSGSEANDTQVKLVWYY 185 (514)
Q Consensus 117 ~~p~v~~A~~~~l-~~~~~~---~~~~~~~~~~~~ela~----~L~~~~~~~~~~~v~~---~~sGseA~~~Alk~a~~~ 185 (514)
..|.|++|+...+ +++..+ .++++++. ...++++ +..+.|.. ..+...+ .+||+.||.+++....
T Consensus 46 ~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~-~~d~lE~~~~~~~~~~f~~-~~~~~~~nv~~~SG~~AN~av~~aL~-- 121 (475)
T PLN03226 46 TSRAVMEALGSCLTNKYSEGLPGARYYGGNE-YIDQIETLCQKRALEAFRL-DPEKWGVNVQPLSGSPANFAVYTALL-- 121 (475)
T ss_pred CCHHHHHHHhhHHhccccCCCCCCcCcCCCh-hHHHHHHHHHHHHHHHhCC-CcceeEEecCcCchHHHHHHHHHHhC--
Confidence 4789999999888 554432 34555443 4445443 34555532 2222223 3899999999998764
Q ss_pred HhhcCCCCccEEEEEec-----CCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHH
Q 010250 186 NNALGRPNKKKFIARQK-----SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 260 (514)
Q Consensus 186 ~~~~~~~~~~~ii~~~~-----~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 260 (514)
.++++|+..+- -.|++...+..++....+.. .+++. .+.. ....++++|
T Consensus 122 ------~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~----------~~~y~----~~~~------~g~iD~d~L 175 (475)
T PLN03226 122 ------QPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFE----------SMPYR----LDES------TGLIDYDKL 175 (475)
T ss_pred ------CCCCEEEECCCCcCcchhhhhhhcccccccceEEEE----------eeeee----ecCC------CCCcCHHHH
Confidence 34567777443 12443322222222211100 00000 0000 011236888
Q ss_pred HHHHHHhCCCcEEEEEE-ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh--c
Q 010250 261 EDLILKEGPETIAAFIA-EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--S 337 (514)
Q Consensus 261 e~li~~~~~~~~aaviv-Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~ 337 (514)
++++.+.. ...|++ +.+++. ..+ +++|+++|++||++|++|++|. +|..+..+....++ ..|++ +
T Consensus 176 e~~l~~~~---pklIv~~~S~~s~---~~D----~a~i~~ia~~~ga~LlvD~AH~-~Gli~~~~~~~p~~-~~Div~~t 243 (475)
T PLN03226 176 EKKAMLFR---PKLIIAGASAYPR---DWD----YARMRKIADKVGALLMCDMAHI-SGLVAAQEAASPFE-YCDVVTTT 243 (475)
T ss_pred HHHHhhcC---CeEEEEecCcCCC---ccC----HHHHHHHHHHcCCEEEEEchhh-hCcccCCCCCCCCC-CCeEEEec
Confidence 88876433 234444 666543 333 7899999999999999999997 65555432112222 36777 4
Q ss_pred hhhhhcCCcccceeEEeCHHHH-----------HHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc---HHHH
Q 010250 338 FAKALSSAYMPIGAILVSPEVS-----------EVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN---IVEQ 403 (514)
Q Consensus 338 ~sK~l~gG~~pig~v~~~~~i~-----------~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~---~~~~ 403 (514)
++|+|.|. +-|++++++++. +...... . ....+++.+.++...++..++++.+.+.+ +.++
T Consensus 244 ~hK~L~GP--~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~-~--a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~ 318 (475)
T PLN03226 244 THKSLRGP--RGGMIFFRKGPKPPKGQGEGAVYDYEDKIN-F--AVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQ 318 (475)
T ss_pred CcccccCC--CceEEEEchhhcccccCCCccHHHHHHHhc-c--ccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 67999874 336777787654 2211100 0 11122333455777777778899886543 5788
Q ss_pred HHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----------C
Q 010250 404 VNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------G 473 (514)
Q Consensus 404 ~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------g 473 (514)
+.++.++|++.|++. ...++..-. ...+..+++..... ....+...|.+.||++... .
T Consensus 319 ~~~na~~L~~~L~~~-G~~l~~~~t-~~hi~lv~~~~~gi----------~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~ 386 (475)
T PLN03226 319 VKANAAALANRLMSK-GYKLVTGGT-DNHLVLWDLRPLGL----------TGSRVEKVLDLAHITLNKNAVPGDSSALVP 386 (475)
T ss_pred HHHHHHHHHHHHHhC-CCEEEcCCC-CCCEEEEEccCCCC----------CHHHHHHHHHHCCCEECCCCCCCCcccCCC
Confidence 999999999999874 333332111 13445555532211 1345667788899988632 2
Q ss_pred CEEEEeCC----CCCCHHHHHHHHHHHHHHHH
Q 010250 474 DNIMMSPP----FIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 474 ~~iRi~p~----~~~t~e~id~~~~~l~~~l~ 501 (514)
..||+..| ..++++|++++.+.|.++++
T Consensus 387 ~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~ 418 (475)
T PLN03226 387 GGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVT 418 (475)
T ss_pred CCcccCcHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 45888433 67889999999999999887
No 250
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.68 E-value=8e-15 Score=154.18 Aligned_cols=343 Identities=14% Similarity=0.087 Sum_probs=193.0
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhc-CC--cc-ccccccCCchHHHH----HHHHHHhcCcCCCCeEEEe---
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNT-LP--FY-HSFWNRTTKPSLDL----AKELLEMFTASKMAKVFFT--- 168 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~-~~--~~-~~~~~~~~~~~~el----a~~L~~~~~~~~~~~v~~~--- 168 (514)
+..|.+..+-. .-.|.+++++...+.+ +. .. +.++.+. ....++ .++++++|.. +.+++.|+
T Consensus 34 ~~~l~l~~sen-----~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~-~~~~~iE~~ar~~~a~lf~a-~~~~~~~~~~~ 106 (452)
T PTZ00094 34 IEGLELIASEN-----FTSRAVLECLGSCFTNKYAEGLPGNRYYGGN-EVVDKIENLCQKRALEAFGL-DPEEWGVNVQP 106 (452)
T ss_pred HcCeeEecccc-----cCCHHHHHHhcchhhccccCCCCCccccccc-hHHHHHHHHHHHHHHHHhCC-CcccceeecCC
Confidence 35666654421 2478999999888754 21 11 1112211 122223 3467777753 44556566
Q ss_pred CChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee-cCCCccccCCCCCCCCcccccCCCCcccCCCCCC
Q 010250 169 NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS-LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGE 247 (514)
Q Consensus 169 ~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (514)
+||++||..+++..+ ..+++||+. ..-||..+.... +........... +....++. .
T Consensus 107 ~sgt~an~~v~~al~--------~~gd~Ii~~-~~ehg~~l~~~~~l~~~~~~~~~~~-----~~~~~~~~------~-- 164 (452)
T PTZ00094 107 YSGSPANFAVYTALL--------QPHDRIMGL-DLPSGGHLTHGFYTAKKKVSATSIY-----FESLPYQV------N-- 164 (452)
T ss_pred CchHHHHHHHHHHhc--------CCCCEEEec-ccccCCcccccccccccccccceee-----eeeeeccc------C--
Confidence 799999999888763 223566664 445665432211 000000000000 00000000 0
Q ss_pred ChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-ee
Q 010250 248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GC 326 (514)
Q Consensus 248 ~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~ 326 (514)
.....+.++|++++.+..+ ..+++. .+..|.+.| +++|.++|+++|+++++|++|+ +|..+... ..
T Consensus 165 ---~~g~id~~~L~~~l~~~~~---~lvi~~--~s~~g~~~d----i~~I~~i~~~~ga~l~vDaaq~-~G~i~~~~~~~ 231 (452)
T PTZ00094 165 ---EKGLIDYDKLEELAKAFRP---KLIIAG--ASAYPRDID----YKRFREICDSVGAYLMADIAHT-SGLVAAGVLPS 231 (452)
T ss_pred ---CCCCcCHHHHHHHHHHhCC---CEEEEe--CCCCCCccC----HHHHHHHHHHcCCEEEEeccch-hccccCCCCCC
Confidence 0022346888888864332 234441 344666777 9999999999999999999997 76664321 11
Q ss_pred cccCCCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc---cHH
Q 010250 327 DKYSIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER---NIV 401 (514)
Q Consensus 327 ~~~gv~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~---~~~ 401 (514)
... ..|+++++ |+|.|. . .|++++++++.+.+...... .......-+.++...++..++++.+.+. ++.
T Consensus 232 ~~~--~~D~l~~S~hK~l~GP-~-Gg~l~~~~~~~~~l~~~~~~--~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~ 305 (452)
T PTZ00094 232 PFP--YADVVTTTTHKSLRGP-R-SGLIFYRKKVKPDIENKINE--AVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYA 305 (452)
T ss_pred CCC--CCcEEEcCCccCCCCC-C-ceEEEEecccchHHHHhhcc--ccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHH
Confidence 111 46888765 999875 2 36777777655443321100 0111111134567777777888888542 467
Q ss_pred HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---------
Q 010250 402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--------- 472 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--------- 472 (514)
+++.++.++|.+.|++. ...+..... ...+..+.+..... ....+...|.++||.+...
T Consensus 306 ~~i~~l~~~l~~~L~~~-g~~v~~~~~-~~~~~~v~~~~~~~----------~~~~~~~~L~~~gI~vs~~~~p~~~~~~ 373 (452)
T PTZ00094 306 KQVLKNAKALAAALEKR-GYDLVTGGT-DNHLVLVDLRPFGI----------TGSKMEKLLDAVNISVNKNTIPGDKSAL 373 (452)
T ss_pred HHHHHHHHHHHHHHHhC-CcEEecCCC-CCceEeecCCcCCC----------CHHHHHHHHHHCCcEEecccCCCCCcCC
Confidence 88999999999999764 222221100 01122333322110 1345667777789999521
Q ss_pred -CCEEEEeCCCCCC----HHHHHHHHHHHHHHHHH
Q 010250 473 -GDNIMMSPPFIMS----PEEVDELISKYGKALKA 502 (514)
Q Consensus 473 -g~~iRi~p~~~~t----~e~id~~~~~l~~~l~~ 502 (514)
...||++++..+| ++||+++++.|.+++..
T Consensus 374 ~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 374 NPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred CCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 2579999976665 99999999999998864
No 251
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.67 E-value=1.3e-15 Score=156.06 Aligned_cols=237 Identities=16% Similarity=0.139 Sum_probs=155.5
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 221 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~ 221 (514)
..+...+|+++++++++ .+.+++++||++|+..+++... ..+++|++....|++.........
T Consensus 38 ~~p~~~~le~~la~l~g---~~~a~~~~sG~~Ai~~~l~~l~--------~~gd~Vl~~~~~y~~~~~~~~~~~------ 100 (369)
T cd00614 38 GNPTVDALEKKLAALEG---GEAALAFSSGMAAISTVLLALL--------KAGDHVVASDDLYGGTYRLFERLL------ 100 (369)
T ss_pred CChhHHHHHHHHHHHHC---CCCEEEEcCHHHHHHHHHHHHc--------CCCCEEEECCCCcchHHHHHHHHH------
Confidence 45667899999999873 3678999999999999998764 335678888888877531110000
Q ss_pred CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250 222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 301 (514)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~ 301 (514)
..++. .+..++.. +.+++++.+. +++.+|++|.++++.|.+.+ +++|.++|
T Consensus 101 ~~~g~---~~~~v~~~------------------d~~~l~~~i~----~~~~~v~~e~~~np~g~~~d----l~~i~~la 151 (369)
T cd00614 101 PKLGI---EVTFVDPD------------------DPEALEAAIK----PETKLVYVESPTNPTLKVVD----IEAIAELA 151 (369)
T ss_pred hhcCe---EEEEeCCC------------------CHHHHHHhcC----CCCeEEEEECCCCCCCeecC----HHHHHHHH
Confidence 00110 01111110 1356666663 35788999999999998887 99999999
Q ss_pred HhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCc-ccceeEEeCH-HHHHHhhhccCCCCcccccCC
Q 010250 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAY-MPIGAILVSP-EVSEVIHSQSNTLGSFSHGFT 377 (514)
Q Consensus 302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~-~pig~v~~~~-~i~~~l~~~~~~~~~~~~~~t 377 (514)
++||+++|+|+++. .+.. .......+|++ +++|.++|.. .+.|++++++ ++++.+... .....
T Consensus 152 ~~~g~~livD~t~~-~~~~-----~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~-------~~~~g 218 (369)
T cd00614 152 HEHGALLVVDNTFA-TPYL-----QRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFL-------RLALG 218 (369)
T ss_pred HHcCCEEEEECCCc-chhc-----CChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHH-------HHhhC
Confidence 99999999999986 2221 12223346877 5779998742 5678888877 888777632 11123
Q ss_pred CCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-----CCcee----------EEEeeeeeEEEEEc
Q 010250 378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----------EIRGTGLILGTEFA 439 (514)
Q Consensus 378 ~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----------~v~g~g~~~~i~~~ 439 (514)
...+|+.+++++..|+.+. ...++..++.+++.+.|++... +|... ...+.|.++.+++.
T Consensus 219 ~~~~p~~a~~~l~~l~tl~--~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~ 293 (369)
T cd00614 219 TILSPFDAWLLLRGLKTLP--LRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELK 293 (369)
T ss_pred CCCCHHHHHHHHcCCCCHH--HHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeC
Confidence 4567888877777776443 2356677777888888876521 22110 12467889999986
No 252
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.67 E-value=3.4e-15 Score=145.03 Aligned_cols=331 Identities=19% Similarity=0.201 Sum_probs=191.2
Q ss_pred EEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHH
Q 010250 103 LDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV 182 (514)
Q Consensus 103 lD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a 182 (514)
+||.|.++. | .+|++++|+.++-.-. ... .+..+...++++++++++. ...++|+.|||.||..+|...
T Consensus 2 ~~f~SDn~~---g-~~~~m~eam~~a~~~~---~~~-YG~D~~~~~~e~~~ae~~g---~~a~~Fv~sGT~aN~lal~~~ 70 (342)
T COG2008 2 IDFRSDNVA---G-PTPEMREALAAANAVG---DDV-YGEDPTTNALEQRIAELFG---KEAALFVPSGTQANQLALAAH 70 (342)
T ss_pred CccccCccC---C-CCHHHHHHHHhccccC---CCC-CCCCHHHHHHHHHHHHHhC---CceEEEecCccHHHHHHHHHh
Confidence 577777443 3 6899999998765321 111 2355667889999999983 478999999999999999876
Q ss_pred HHHHhhcCCCCccEEEEEecCCcccce--eeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHH
Q 010250 183 WYYNNALGRPNKKKFIARQKSYHGSTL--IAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 260 (514)
Q Consensus 183 ~~~~~~~~~~~~~~ii~~~~~yHG~t~--~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 260 (514)
. . +...+++...-|-.+. ++....+. . .+.+.+ + + .-+..+++++
T Consensus 71 ~--------~-~~~~vi~~~~aHi~~~E~Ga~~~~~~-----~--~~~~~~-----~--------g----~~Gklt~e~v 117 (342)
T COG2008 71 C--------Q-PGESVICHETAHIYTDECGAPEFFGG-----G--QKLPIV-----P--------G----ADGKLTPEDV 117 (342)
T ss_pred c--------C-CCCeEEEeccccceecccCcHHHHcC-----C--ceeccC-----C--------C----CCCCcCHHHH
Confidence 3 2 2233444444444321 11111110 0 000000 0 0 0011125777
Q ss_pred HHHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc--CcccccccceecccCCCCchh
Q 010250 261 EDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC--AFGRLGTMFGCDKYSIKPDLV 336 (514)
Q Consensus 261 e~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t--G~gr~G~~~~~~~~gv~pDiv 336 (514)
+..+... ....+..++.|.-.+++|.+. |.++|++|.++|++||+.|++|-+-- ..--.| -....+.--.|++
T Consensus 118 ~~~i~~~d~~~~~~~~~~~e~~~te~GtVy-~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg--~~~~~~~~~~D~v 194 (342)
T COG2008 118 EAAIRPDDIHHAPTPLAVLENTATEGGTVY-PLDELEAISAVCKEHGLPLHMDGARLANALVALG--VALKTIKSYVDSV 194 (342)
T ss_pred HHhhcCCCcccCCCceEEEeeccCCCceec-CHHHHHHHHHHHHHhCCceeechHHHHHHHHHcC--CCHHHHHhhCCEE
Confidence 7766531 122455666666666888665 67999999999999999999996521 000011 0111111124666
Q ss_pred ch--hhhhcCCcccceeEE-eCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Q 010250 337 SF--AKALSSAYMPIGAIL-VSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQD 413 (514)
Q Consensus 337 ~~--sK~l~gG~~pig~v~-~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~ 413 (514)
+| +|+++ +|+++++ ++.++++.+.... + ..|+-+.-.-+-.++++.+|+.--......+.+++.++|.+
T Consensus 195 ~~~~tK~g~---~~~gAiv~gn~~~~~~a~~~r----K-~~Ggl~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~ 266 (342)
T COG2008 195 SFCLTKGGG---APVGAIVFGNRDFAKRARRWR----K-RAGGLMRKARFLAAQGLYALEDDVWRLAADHANAMAARLAE 266 (342)
T ss_pred EEecccCCc---ceeeeEEEcCHHHHHHHHHHH----H-HhcccHhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 54 46654 6888766 5778877765321 1 23444444445555555555421111224556666888888
Q ss_pred hhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHH
Q 010250 414 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELI 493 (514)
Q Consensus 414 ~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~ 493 (514)
++++....++... ....++.+.++.... ........+...|++....+..+||..+..+|+++|++++
T Consensus 267 ~~~~~~G~~~~~~--~~tN~vf~~l~~~~i----------~~l~~~~~~~~~~~~~~~~~~~vRfvts~a~~~edv~~~~ 334 (342)
T COG2008 267 GLEAKPGVKLAFP--VETNMVFVRLPESAI----------EALRLAGALFYRGVLIGAHGEIVRFVTSWATSEEDVDELV 334 (342)
T ss_pred hhhhcCCceeccC--CcccEEEEECChHHH----------HHHHhhchhheeeeeccCCCceEEEEeeccCCHHHHHHHH
Confidence 8885433333222 344555565543210 0222334455566666555557999999999999999999
Q ss_pred HHHHHHH
Q 010250 494 SKYGKAL 500 (514)
Q Consensus 494 ~~l~~~l 500 (514)
..+++.+
T Consensus 335 ~~~~~~~ 341 (342)
T COG2008 335 AAIKALL 341 (342)
T ss_pred HHHHHhh
Confidence 9888764
No 253
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.67 E-value=1.3e-14 Score=152.87 Aligned_cols=303 Identities=16% Similarity=0.171 Sum_probs=162.2
Q ss_pred CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcc
Q 010250 163 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYW 240 (514)
Q Consensus 163 ~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~ 240 (514)
++|+.++++++|+..++...... ... ..+++|++.+++|..+.......+.... +..++. ...|
T Consensus 162 ~~I~vT~Ga~~al~~~~~aL~~~--~ll-~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~-----------~v~v~~~~~~~f 227 (527)
T PRK09275 162 FDLFAVEGGTAAMCYIFDSLKEN--GLL-KAGDKIALMTPIFTPYLEIPELPRYDLE-----------VVHINADEENEW 227 (527)
T ss_pred CeEEEeCCHHHHHHHHHHHHhhh--hcC-CCCCEEEEeCCChHHHHHHHHHcCCCeE-----------EEEeecCcccCC
Confidence 48999999999999988752100 001 3457899999999887433222111100 011111 1112
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh--cCCEEEEechhcCcc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK--YDILFIADEVICAFG 318 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~--~gillI~DEv~tG~g 318 (514)
+. +.+++++++. ++..+.+++.|.|+ +|.+ .+++.+++|.++|++ +|+++|+||+|..|.
T Consensus 228 ~~-------------d~~~l~~~~~---~~tkai~l~nP~NP-TG~v-~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~ 289 (527)
T PRK09275 228 QY-------------PDSELEKLRD---PSIKALFLVNPSNP-PSVA-MSDESLEKIADIVNEKRPDLMIITDDVYGTFV 289 (527)
T ss_pred CC-------------CHHHHHhhcC---CCCCEEEEeCCcCC-cCCC-CCHHHHHHHHHHHHhcCCCcEEEECCCChhhc
Confidence 21 1356666543 33345555667544 4544 467899999999965 599999999998773
Q ss_pred cccccceecccCCCCc-h---hchhhhhcCCcccceeEEeCHH-----HHHHhh--------hccC--------------
Q 010250 319 RLGTMFGCDKYSIKPD-L---VSFAKALSSAYMPIGAILVSPE-----VSEVIH--------SQSN-------------- 367 (514)
Q Consensus 319 r~G~~~~~~~~gv~pD-i---v~~sK~l~gG~~pig~v~~~~~-----i~~~l~--------~~~~-------------- 367 (514)
. .... .....|+ + -+|||.++-.+|++|+++++++ +++.+. ..-.
T Consensus 290 ~--~~~s--~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidr 365 (527)
T PRK09275 290 D--DFRS--LFAVLPYNTILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDR 365 (527)
T ss_pred c--cccC--HHHhCCCCEEEEeehhhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHH
Confidence 2 1111 1111233 2 2689977643399999999875 332220 0000
Q ss_pred ---CCCcccccCCCCCcHHHHHH-H----HHHHHHHhh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEee-eeeEEE
Q 010250 368 ---TLGSFSHGFTYSGHPVSCAV-A----IEALKIYKE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGT 436 (514)
Q Consensus 368 ---~~~~~~~~~t~~~~pl~~aa-a----~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i 436 (514)
....+....|.+.+...+.+ + .++|+.-++ +...+.++++.+.+.+.|. .+.. ..... +.+..+
T Consensus 366 lvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~~~~~~~~~~Rr~~l~~~Lg----~~~~-~~~p~g~fY~~~ 440 (527)
T PRK09275 366 LVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYKKAMKDIIRRRYKALYEGLG----LPEP-EDPNNAAYYTLI 440 (527)
T ss_pred HHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHcC----CCCc-CCCCCeeEEEEE
Confidence 00011122344444333333 3 223331110 1234455555555555552 1111 11223 345555
Q ss_pred EEccCCCC--CCCCC----CccchHHHHHHHHH-HCCcEEEeeC------CEEEEeCCCC-CCHHHHHHHHHHHHHHHHH
Q 010250 437 EFADNKSP--NEPFP----PEWGIGAYFGAQCE-KHGMLVRVSG------DNIMMSPPFI-MSPEEVDELISKYGKALKA 502 (514)
Q Consensus 437 ~~~~~~~~--~~~~~----~~~~~~~~~~~~l~-~~Gv~~~~~g------~~iRi~p~~~-~t~e~id~~~~~l~~~l~~ 502 (514)
++...... ...+. .... ...++..|+ +.||.+.|+. ..+|++ ++ .+++++.++.++|.+.+++
T Consensus 441 di~~~~~~~~g~~f~~~l~~~~~-~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis--~a~~~~~~~~~~~~rl~~~l~~ 517 (527)
T PRK09275 441 DLEEWAEKNYGKEFADYLKKNYS-PVDLLFRLAEETGVVLLPGGGFGGPEWSVRVS--LANLNEEDYAKIGKAIRKLLDE 517 (527)
T ss_pred EhHHhhhhccCchhhhhhhccCC-HHHHHHHHHhcCCEEEeCchhhCCCCCeEEEE--EecCCHHHHHHHHHHHHHHHHH
Confidence 55431100 00000 0001 234555555 5699988752 369999 66 6889999999999999988
Q ss_pred HHHHHHH
Q 010250 503 TEERVKE 509 (514)
Q Consensus 503 ~~~~~~~ 509 (514)
..++.+.
T Consensus 518 y~~~~~~ 524 (527)
T PRK09275 518 YYEEYKK 524 (527)
T ss_pred HHHHHHh
Confidence 8776543
No 254
>PLN02397 aspartate transaminase
Probab=99.66 E-value=1.7e-14 Score=150.51 Aligned_cols=217 Identities=15% Similarity=0.132 Sum_probs=128.0
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc--cc-eeccc-CCC
Q 010250 257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--MF-GCDKY-SIK 332 (514)
Q Consensus 257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~--~~-~~~~~-gv~ 332 (514)
++.+++.+.+.. .++.++++...++.+|.+. +++.+++|.++|++||+++|.||+|.+|...+. .. ....+ ...
T Consensus 181 ~~~l~~~l~~~~-~~~~~i~~~~P~NPTG~v~-s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~ 258 (423)
T PLN02397 181 FDGLLEDLKAAP-DGSFVLLHACAHNPTGVDP-TPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDG 258 (423)
T ss_pred HHHHHHHHHhCC-CCCEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcC
Confidence 355555554332 3345555554555566544 678999999999999999999999998854221 11 11111 111
Q ss_pred Cchh---chhhhhcC-CcccceeEE--e-CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH-------h-h
Q 010250 333 PDLV---SFAKALSS-AYMPIGAIL--V-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY-------K-E 397 (514)
Q Consensus 333 pDiv---~~sK~l~g-G~~pig~v~--~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~-------~-~ 397 (514)
++++ +|||.++- | +++|+++ + ++++++.+...- ........++.+.+++.++.++|+.- + -
T Consensus 259 ~~vI~~~SfSK~~~~~G-~RvG~~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~ 334 (423)
T PLN02397 259 HEILVAQSYAKNMGLYG-ERVGALSVVCKSADVAVRVKSQL---KLIARPMYSNPPIHGASIVATILGDPELFSEWTKEL 334 (423)
T ss_pred CcEEEEEECcccCCCcc-ccceEEEEEeCCHHHHHHHHHHH---HHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 2233 68998873 5 9999984 4 566544332100 00011112234555666666656421 0 1
Q ss_pred ccHHHHHHHHHHHHHhhhhhccCCC-ceeEEEeeee-eEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEeeCC
Q 010250 398 RNIVEQVNKIAPKFQDGVKAFSDSP-IIGEIRGTGL-ILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSGD 474 (514)
Q Consensus 398 ~~~~~~~~~~~~~l~~~L~~l~~~~-~~~~v~g~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g~ 474 (514)
+++.+.++++++.+.+.|+++ ..+ ....+...|. ++++.+. ..++..|+ +.||.+.+.+
T Consensus 335 ~~~~~~~~~rr~~l~~~L~~~-~~~~~~~~~~p~gg~fl~~~l~----------------~~~~~~Ll~~~~V~v~~~~- 396 (423)
T PLN02397 335 KGMADRIISMRQKLYDALEAR-GSPGDWSHITKQIGMFSFTGLN----------------KEQVDRMTKEYHIYMTRDG- 396 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CCCCCCCcccCCceEEEecCCC----------------HHHHHHHHHhCCEEECCCC-
Confidence 245667888888888888876 211 1112233444 4444442 12556664 6699987544
Q ss_pred EEEEeCCCC-CCHHHHHHHHHHHHHHHH
Q 010250 475 NIMMSPPFI-MSPEEVDELISKYGKALK 501 (514)
Q Consensus 475 ~iRi~p~~~-~t~e~id~~~~~l~~~l~ 501 (514)
|++ ++ .+++.|++++++|+++++
T Consensus 397 --Ri~--~~~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 397 --RIS--MAGLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred --eEE--EeeCCHHHHHHHHHHHHHHHh
Confidence 888 54 899999999999999974
No 255
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.66 E-value=4.8e-14 Score=149.10 Aligned_cols=340 Identities=14% Similarity=0.125 Sum_probs=189.5
Q ss_pred CCCHHHHHHHHHHHhcCCccccc-----cccCCchHHHHHHHHHHhcCcCCCCeE-EEeCChhHHHHHHHHHHHHHHhhc
Q 010250 116 GSEPRLVAAATAQLNTLPFYHSF-----WNRTTKPSLDLAKELLEMFTASKMAKV-FFTNSGSEANDTQVKLVWYYNNAL 189 (514)
Q Consensus 116 h~~p~v~~A~~~~l~~~~~~~~~-----~~~~~~~~~ela~~L~~~~~~~~~~~v-~~~~sGseA~~~Alk~a~~~~~~~ 189 (514)
|.+|.|.+++.+..... .++.+ ..+..+...++.+.++++++ ++.+ ++.++|+.+...++.+++.+...+
T Consensus 81 ~~~p~i~~~~~~~~~~~-~~tpYq~e~~sqG~lel~~~~~~~la~l~G---~~~~~l~~~~GA~a~~~~l~~~r~~~~~~ 156 (481)
T PRK04366 81 KYNPKINEKVARLPGFA-ELHPLQPEETVQGALELMYELQEWLKEITG---MDAVTLQPAAGAHGELTGLLMIRAYHEAR 156 (481)
T ss_pred CCCHHHHHHHHhCcchh-cCCCCCChhhhhHHHHHHHHHHHHHHHHhC---CCceEEEeCcHHHHHHHHHHHHHHHhhcc
Confidence 46788888887752221 12221 12334556677888888863 3344 445677777766665555433333
Q ss_pred CCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC
Q 010250 190 GRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP 269 (514)
Q Consensus 190 ~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~ 269 (514)
+..++++||+.++.|+... ..+...|... ..++....++ .++++|++++.
T Consensus 157 Gd~~~~~Vlv~~~~hp~~~-~~~~~~G~~v------------v~v~~~~~~~-------------~D~e~L~~~i~---- 206 (481)
T PRK04366 157 GDTKRTEVIVPDSAHGTNP-ASAAMAGFKV------------VEIPSNEDGL-------------VDLEALKAAVG---- 206 (481)
T ss_pred CcCCCCEEEEcCCccHhHH-HHHHHcCCEE------------EEeecCCCCC-------------cCHHHHHhhcc----
Confidence 3224567888777664443 2222222211 1111111111 12466766663
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcC---
Q 010250 270 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSS--- 344 (514)
Q Consensus 270 ~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~g--- 344 (514)
+++++|++...+ ..|.+.. -+++|.++|+++|+++|+|+++. .+-+|.. ....+| .|+++++ |.|++
T Consensus 207 ~~t~~V~v~~Pn-~tG~~~~---dl~eI~~~a~~~gal~iVD~a~~-~~~~g~~-~~~~~G--aD~~~~~~hK~l~~P~g 278 (481)
T PRK04366 207 EDTAALMLTNPN-TLGLFER---NILEIAEIVHEAGGLLYYDGANL-NAILGKA-RPGDMG--FDVVHLNLHKTFSTPHG 278 (481)
T ss_pred cCCeEEEEeCCC-Cccccch---HHHHHHHHHHHcCCEEEEEecCh-hhhcccC-CccccC--CCEEEEechhhcCCCCC
Confidence 245555554333 5565521 29999999999999999999985 3333321 122233 5887653 87763
Q ss_pred -CcccceeEEeCHHHHHHhhhccCC-CC-ccc----------ccCCCCCcHHHHHHHHHHHHHHhhccH---HHHHHHHH
Q 010250 345 -AYMPIGAILVSPEVSEVIHSQSNT-LG-SFS----------HGFTYSGHPVSCAVAIEALKIYKERNI---VEQVNKIA 408 (514)
Q Consensus 345 -G~~pig~v~~~~~i~~~l~~~~~~-~~-~~~----------~~~t~~~~pl~~aaa~aal~~~~~~~~---~~~~~~~~ 408 (514)
|+..+|++++++++.+.+...--. .+ .+. -.-.++++.+.+.++...+..+..+++ .++...+.
T Consensus 279 ~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a 358 (481)
T PRK04366 279 GGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNA 358 (481)
T ss_pred CCCCCeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 324567788888887776321000 00 000 011223344555566666666555544 45567778
Q ss_pred HHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe------eCCEEEEeCCC
Q 010250 409 PKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV------SGDNIMMSPPF 482 (514)
Q Consensus 409 ~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~------~g~~iRi~p~~ 482 (514)
++|+++|+++.+... . + ..+..+.+.... +.........+.+.|.++|+.+.. ..+.+|++|..
T Consensus 359 ~~l~~~L~~~~~~~~--~--~-~~~~~~~~~~~~-----~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e 428 (481)
T PRK04366 359 NYLKARLKDIYDLPY--D--R-PCMHEFVLSGKK-----LKETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTE 428 (481)
T ss_pred HHHHHHhHhhCcccC--C--C-CeeEEEEEECcc-----ccccCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccC
Confidence 999999987511111 1 1 011111111100 000000145688999999988751 14579999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHH
Q 010250 483 IMSPEEVDELISKYGKALKATEERV 507 (514)
Q Consensus 483 ~~t~e~id~~~~~l~~~l~~~~~~~ 507 (514)
..|++|||++++.|+++.+++.+..
T Consensus 429 ~~t~edid~l~~~l~~i~~~~~~~~ 453 (481)
T PRK04366 429 TESKETLDAFIAAMKQIAEEAKENP 453 (481)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCc
Confidence 9999999999999999988776543
No 256
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.65 E-value=8.3e-15 Score=154.04 Aligned_cols=346 Identities=14% Similarity=0.160 Sum_probs=177.2
Q ss_pred CCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHH-HHHHHhcCc--CCCC--eEEEeCChhHHHHHHHHHHHHHHhh
Q 010250 114 LGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLA-KELLEMFTA--SKMA--KVFFTNSGSEANDTQVKLVWYYNNA 188 (514)
Q Consensus 114 lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela-~~L~~~~~~--~~~~--~v~~~~sGseA~~~Alk~a~~~~~~ 188 (514)
.|...|+++.++.+.+.. ..|... .+..+...+++ +.+.+.+.. ...+ +|++++||++|+..++...... .
T Consensus 104 p~~~~~~~~~~~~~~~~~-~~Y~~p-~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~--~ 179 (521)
T TIGR03801 104 LGFDPDAFLYEMCDGIIG-DNYPVP-DRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKAN--E 179 (521)
T ss_pred CCCCCCHHHHHHHHHhhc-CCCCCC-CCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHh--h
Confidence 455667788888777632 222111 11222333333 233333211 1223 7999999999999988752110 0
Q ss_pred cCCCCccEEEEEecCCcccceeeeecC-CCccccCCCCCCCCcccccCCCC--c-----ccCCCCCCChhHHHHHHHHHH
Q 010250 189 LGRPNKKKFIARQKSYHGSTLIAASLS-GLPALHQKFDLPAPFVLHTDCPH--Y-----WRYAHPGETEEEYSTRLANNL 260 (514)
Q Consensus 189 ~~~~~~~~ii~~~~~yHG~t~~~~~~s-~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~l 260 (514)
.. ..+++|++.+++|........... +.. +..+++.. . |+. +.+++
T Consensus 180 ll-~pGD~Vlv~~P~y~~y~~~~~l~~~g~~------------vv~i~~~~~~~~g~~~~~~-------------d~~~l 233 (521)
T TIGR03801 180 LL-KKGDKIALMTPIFTPYLEIPELPRYDFE------------VVRIKADEMTEDGTHTWQY-------------PDKEL 233 (521)
T ss_pred cC-CCCCEEEEeCCCcHHHHHHHHHhcCCcE------------EEEeecccccccccccCCC-------------CHHHH
Confidence 12 335789999999987643221111 111 01111110 0 111 13566
Q ss_pred HHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc--CCEEEEechhcCcccccccceecccCCCCc-h--
Q 010250 261 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY--DILFIADEVICAFGRLGTMFGCDKYSIKPD-L-- 335 (514)
Q Consensus 261 e~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~--gillI~DEv~tG~gr~G~~~~~~~~gv~pD-i-- 335 (514)
++++. ++..+.+++.|.|++ |. ..+++.+++|.++|++| |+++|+||+|..|.. ... ......|| +
T Consensus 234 ~~~~~---~~~kai~l~nP~NPT-G~-vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~~~--sl~~~~~~~vI~ 304 (521)
T TIGR03801 234 EKLRD---PSIKALFVVNPSNPP-SV-AMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD--DFR--SLFAELPYNTIG 304 (521)
T ss_pred HHhcC---CCCcEEEEeCCCCCC-CC-CCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc--ccc--chhhhCCCCEEE
Confidence 65542 334455567776555 44 34678899999999987 999999999987732 111 11112243 2
Q ss_pred -hchhhhhcCCcccceeEEeCHH-HHHHhhhc---------cCCC--------------------CcccccCCCCCcHHH
Q 010250 336 -VSFAKALSSAYMPIGAILVSPE-VSEVIHSQ---------SNTL--------------------GSFSHGFTYSGHPVS 384 (514)
Q Consensus 336 -v~~sK~l~gG~~pig~v~~~~~-i~~~l~~~---------~~~~--------------------~~~~~~~t~~~~pl~ 384 (514)
-+|||.++-.+|++|+++++++ +++.+... ..++ +......|.+.+...
T Consensus 305 v~SfSK~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~ 384 (521)
T TIGR03801 305 VYSFSKYFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQ 384 (521)
T ss_pred EEcchhhccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHH
Confidence 2689987643399999999764 22211100 0000 001111233333222
Q ss_pred HH-----HHHHHHHHHhh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCC--CCCCC----Cc
Q 010250 385 CA-----VAIEALKIYKE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSP--NEPFP----PE 451 (514)
Q Consensus 385 ~a-----aa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~--~~~~~----~~ 451 (514)
+. ++.+.++.-.+ +...+.++++.+.+.+.| .+ +.......-|.+..+++...... ...|. ..
T Consensus 385 Q~q~al~a~~all~~~~~y~~~~~~~~~~R~~~l~~~L-g~---~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~ 460 (521)
T TIGR03801 385 QVQMALFSLFALMDKENAYKAETKDICRRREKLLFRGL-GL---PLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKN 460 (521)
T ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhc-CC---CCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhcc
Confidence 22 33444432110 123445555555555555 11 11111122345566666531100 00000 00
Q ss_pred cchHHHHHHHHH-HCCcEEEeeC------CEEEEeCCCC-CCHHHHHHHHHHHHHHHHHHHH
Q 010250 452 WGIGAYFGAQCE-KHGMLVRVSG------DNIMMSPPFI-MSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 452 ~~~~~~~~~~l~-~~Gv~~~~~g------~~iRi~p~~~-~t~e~id~~~~~l~~~l~~~~~ 505 (514)
.. ...++.+|. +.||.+.|+. ..+|++ ++ .+++++.++.++|.+.+++..+
T Consensus 461 ~~-~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRis--la~l~~~~~~~~~~rl~~~~~~~~~ 519 (521)
T TIGR03801 461 YS-PVDVLFRLAEETGIVLLPGGGFGGPEWSVRVS--LANLNEYDYAEIGRAIRKILDEYYE 519 (521)
T ss_pred CC-HHHHHHHHHHhCCEEEeCchhcCCCCCeEEEE--ecCCCHHHHHHHHHHHHHHHHHHHH
Confidence 01 234555554 6699998752 359999 65 7899999999999999876543
No 257
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.65 E-value=6.7e-15 Score=151.61 Aligned_cols=285 Identities=15% Similarity=0.101 Sum_probs=170.5
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
.+...+|+++++++++ .+..++++||+.|+..++.... ..+++||+.++.|.+. .........
T Consensus 60 ~pt~~~Le~~lA~l~G---~~~al~~~sG~~Ai~~~l~al~--------~~Gd~Vv~~~~~y~~~-~~~~~~~~~----- 122 (386)
T PRK06767 60 NPTVKLFEERMAVLEG---GEEALAFGSGMAAISATLIGFL--------KAGDHIICSNGLYGCT-YGFLEVLEE----- 122 (386)
T ss_pred CcchHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEcCCcHHHH-HHHHHHHHh-----
Confidence 4456889999999974 3568889999999888876543 2346788777665433 221111000
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
.++.. +..++.. +.+++++.+. +++.+|++|..++..|.+.+ +++|.++|+
T Consensus 123 ~~gi~---~~~~~~~------------------d~~~l~~~i~----~~tklV~lesp~NptG~v~d----l~~I~~la~ 173 (386)
T PRK06767 123 KFMIT---HSFCDME------------------TEADIENKIR----PNTKLIFVETPINPTMKLID----LKQVIRVAK 173 (386)
T ss_pred hcCeE---EEEeCCC------------------CHHHHHHhhC----cCceEEEEeCCCCCCceecC----HHHHHHHHH
Confidence 00100 0000100 1356666553 35678888888888898887 899999999
Q ss_pred hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccc-eeEEeCHHHHHHhhhccCCCCcccccCCCC
Q 010250 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPI-GAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pi-g~v~~~~~i~~~l~~~~~~~~~~~~~~t~~ 379 (514)
++|+++|+||+++ .+..+... .+| .|+++ ++|.++|.+.++ |+++++++.++.+.... ....|..
T Consensus 174 ~~g~~vivD~a~a-~~~~~~pl---~~g--~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~----~~~~g~~-- 241 (386)
T PRK06767 174 RNGLLVIVDNTFC-SPYLQRPL---ELG--CDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPM----RKDIGGI-- 241 (386)
T ss_pred HcCCEEEEECCCc-ccccCCch---hcC--CcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHH----HHHhCCC--
Confidence 9999999999986 22222211 123 47664 569998854675 77888888776653210 0011222
Q ss_pred CcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCcee---------EEEeeeeeEEEEEccCCCCCCCCCC
Q 010250 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIG---------EIRGTGLILGTEFADNKSPNEPFPP 450 (514)
Q Consensus 380 ~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~---------~v~g~g~~~~i~~~~~~~~~~~~~~ 450 (514)
.+|+.+++++..|+.+. ...++.+++..++.+.|++......+. ..++.|.++.|++....
T Consensus 242 ~~~~~a~l~~~~L~tl~--~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~-------- 311 (386)
T PRK06767 242 MAPFDAWLLLRGLKTLA--VRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGK-------- 311 (386)
T ss_pred CCHHHHHHHHcCCCcHH--HHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCH--------
Confidence 35776666666665443 245677888888888887653222111 12356788899885321
Q ss_pred ccchHHHHHHHHHHCCcEEEee----------------------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 451 EWGIGAYFGAQCEKHGMLVRVS----------------------------GDNIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 451 ~~~~~~~~~~~l~~~Gv~~~~~----------------------------g~~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
.....|.+.|...++.++-+ .+-|||+. --|+.+.+++-|+++|+
T Consensus 312 --~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~sv----GlE~~~dl~~dl~~al~ 384 (386)
T PRK06767 312 --EETQAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSV----GLESWEDIVSDLEQALK 384 (386)
T ss_pred --HHHHHHHHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEe----ccCCHHHHHHHHHHHHh
Confidence 01344666665444433311 13488883 44567777777777765
No 258
>PRK08637 hypothetical protein; Provisional
Probab=99.65 E-value=6.9e-14 Score=144.53 Aligned_cols=291 Identities=11% Similarity=0.064 Sum_probs=167.4
Q ss_pred CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-Cccc
Q 010250 163 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWR 241 (514)
Q Consensus 163 ~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~ 241 (514)
+++++++|+++|+..++++.. ..++.|++.+++|...........|... ..++.. +.+
T Consensus 70 ~~I~it~G~~~al~~~~~~l~--------~~gd~Vlv~~P~y~~~~~~~~~~~g~~v------------v~v~~~~~~~- 128 (388)
T PRK08637 70 SLPIVTNALTHGLSLVADLFV--------DQGDTVLLPDHNWGNYKLTFNTRRGAEI------------VTYPIFDEDG- 128 (388)
T ss_pred ceeeEccchHHHHHHHHHHhc--------CCCCEEEEcCCCCccHHHHHHHhcCCEE------------EEecccCCCC-
Confidence 578999999999998888763 2346899999999876532211122111 111110 000
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh-----cCCEEEEechhcC
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK-----YDILFIADEVICA 316 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~-----~gillI~DEv~tG 316 (514)
. .+++++++.+.....+...++++...+|++|. ..+++.+++|.++|++ ||+++|.||+|.+
T Consensus 129 ---------~---~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~-~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~ 195 (388)
T PRK08637 129 ---------G---FDTDALKEALQAAYNKGKVIVILNFPNNPTGY-TPTEKEATAIVEAIKELADAGTKVVAVVDDAYFG 195 (388)
T ss_pred ---------c---CCHHHHHHHHHhhccCCCEEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHHHhcCCcEEEEecccchh
Confidence 0 12567777665211122333444323555564 4567889999998886 9999999999998
Q ss_pred cccccccc-e-e-cccCCCCch--h---chhhhhcCCcccceeEEeC------HHHHHHhhhccCCCCcccccCCCCCcH
Q 010250 317 FGRLGTMF-G-C-DKYSIKPDL--V---SFAKALSSAYMPIGAILVS------PEVSEVIHSQSNTLGSFSHGFTYSGHP 382 (514)
Q Consensus 317 ~gr~G~~~-~-~-~~~gv~pDi--v---~~sK~l~gG~~pig~v~~~------~~i~~~l~~~~~~~~~~~~~~t~~~~p 382 (514)
|-..+... . . ...+..+.+ + ++||.++..++++|+++.. +++++.+.... ........++.|.
T Consensus 196 l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~s~ 272 (388)
T PRK08637 196 LFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKV---KGLIRSNISNGPH 272 (388)
T ss_pred cccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHH---HHHhhcccCCCCc
Confidence 85444321 1 1 111222332 2 5899766544999999853 67777765210 0000112345677
Q ss_pred HHHHHHHHHHHH--Hhh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHH
Q 010250 383 VSCAVAIEALKI--YKE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAY 457 (514)
Q Consensus 383 l~~aaa~aal~~--~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~ 457 (514)
++++++.++|+. +.+ ......++++.+.+.+.|++....+.+...+ ..|.++++.+.+. ....
T Consensus 273 ~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~~------------~~~~ 340 (388)
T PRK08637 273 PSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKGV------------DAEE 340 (388)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCChH------------HHHH
Confidence 888888777741 110 1122234444444455554321001122222 3466777776421 1345
Q ss_pred HHHHHH-HCCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 458 FGAQCE-KHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 458 ~~~~l~-~~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+.+.|+ ++||.+...+ +.+||+.. ..+++++++++++|.++++++
T Consensus 341 l~~~l~~~~gv~~~~~~~~~iRi~~~-~~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 341 LRVHLLEKYGIGTIALNETDLRIAFS-CVEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred HHHHHhhhcceEEEeccCCceEEEee-cCCHHHHHHHHHHHHHHHHhc
Confidence 778885 6799887554 46999943 268999999999999988754
No 259
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.64 E-value=1.1e-14 Score=145.06 Aligned_cols=349 Identities=16% Similarity=0.158 Sum_probs=191.9
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC-ccccc-cccCCch-HHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSF-WNRTTKP-SLDLAKELLEMFTASKMAKVFFTNSGSEAND 176 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~~-~~~~~~~-~~ela~~L~~~~~~~~~~~v~~~~sGseA~~ 176 (514)
.-|||..+ .|-.+|+|.+|+.+.+.... .-|++ ++.-.+. .++..+.++++++.. ..+++||+++||++.
T Consensus 44 ~vyld~~a------t~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd-~~dIiFts~ATEs~N 116 (428)
T KOG1549|consen 44 PVYLDNQA------TGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINAD-PSDIVFTSGATESNN 116 (428)
T ss_pred cEEEecCc------CCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCC-CCcEEEeCCchHHHH
Confidence 46888744 45579999999999876532 22333 2222333 344455667776544 455999999999999
Q ss_pred HHHHHH-HHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250 177 TQVKLV-WYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255 (514)
Q Consensus 177 ~Alk~a-~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (514)
.+++-. |.+.. ..++.||.++ .-|.+...+....-.. ++ .+..+|.+. -...
T Consensus 117 lvl~~v~~~~~~----~~~k~iitl~-~eH~~v~~s~~~l~~~----g~-----~Vt~lpv~~-------------~~~~ 169 (428)
T KOG1549|consen 117 LVLKGVARFFGD----KTKKHIITLQ-TEHPCVLDSCRALQEE----GL-----EVTYLPVED-------------SGLV 169 (428)
T ss_pred HHHHHhhccccc----cccceEEEec-ccCcchhHHHHHHHhc----Ce-----EEEEeccCc-------------cccc
Confidence 999865 54421 1122566654 4555543332211111 11 122222221 1112
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCch
Q 010250 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL 335 (514)
Q Consensus 256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDi 335 (514)
+++.++..|. .++.+|.++.++++.|+..| +++|.++|+++|+.+++|-+|. .|.. .++.-.+.+|.
T Consensus 170 d~~~~~~~i~----~~T~lv~I~~Vnn~~gv~~P----v~EI~~icr~~~v~v~~DaAQa-vG~i----~vDV~eln~D~ 236 (428)
T KOG1549|consen 170 DISKLREAIR----SKTRLVSIMHVNNEIGVLQP----VKEIVKICREEGVQVHVDAAQA-VGKI----PVDVQELNADF 236 (428)
T ss_pred cHHHHHHhcC----CCceEEEEEecccCcccccc----HHHHHHHhCcCCcEEEeehhhh-cCCc----cccHHHcCchh
Confidence 2566666665 58899999999999999999 9999999999999999999997 6543 45666677899
Q ss_pred hchh--hhhcCCcccceeEEeCHH---HHH-HhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc--cHHHHHHHH
Q 010250 336 VSFA--KALSSAYMPIGAILVSPE---VSE-VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER--NIVEQVNKI 407 (514)
Q Consensus 336 v~~s--K~l~gG~~pig~v~~~~~---i~~-~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~--~~~~~~~~~ 407 (514)
++++ |.++- -++|++++++. +.. ....++.+.+.+..|.-- ...+..--++.++.... .....+.+.
T Consensus 237 ~s~s~HK~ygp--~~iGaLYvr~~~~~~~~~p~~~GGgq~r~~rsGT~~---~~~~~~~gsA~e~~~~~~~~~~~~~~~~ 311 (428)
T KOG1549|consen 237 LSISAHKIYGP--PGIGALYVRRKRPRLRVEPPLSGGGQERGLRSGTVA---TPLAVGLGSAAEFVNKEMAYDEAIIKRL 311 (428)
T ss_pred eeeecccccCC--CcceEEEEccCCCcccccCcccCCccccccccCCcC---chhhhhhHHHHHHHHhhcchhHHHHHHH
Confidence 8876 87765 34999999861 110 111111111222222111 22222223344544332 223344444
Q ss_pred HHHHHhhhhh-ccCC--CceeEEEeeeeeEEEEEc------------cCCCCCCCCCCccchHHHHHHHHHHCCcEEEee
Q 010250 408 APKFQDGVKA-FSDS--PIIGEIRGTGLILGTEFA------------DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS 472 (514)
Q Consensus 408 ~~~l~~~L~~-l~~~--~~~~~v~g~g~~~~i~~~------------~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~ 472 (514)
...+..++.. +... ......+ ...+..+-|. .-.....+.+.... ......++..|+-....
T Consensus 312 ~~~ll~~i~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~--~epsy~l~~~G~~~~~~ 388 (428)
T KOG1549|consen 312 SEKLLMGIGQSLPEVTLNGSGKSR-YPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSAS--LEPSYVLRAIGVDEDLA 388 (428)
T ss_pred HHHHHHHHhhhCchhhccCCcccc-cccceeeecccccCcchhhhhhhhhhcccchhhcCC--CCcchhhhhcCcchhhh
Confidence 5555554432 1110 0000000 1111222222 10000000000000 01123445556644444
Q ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 473 GDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 473 g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
...|||+.....+++|++.+++.+.+.+..+
T Consensus 389 ~~~iRis~G~y~t~~di~~~~~~i~~~v~~~ 419 (428)
T KOG1549|consen 389 HSSIRISIGRYTTEEDIDYLVDAIKKLVSLL 419 (428)
T ss_pred cceeEEeeeeeCcHHHHHHHHHHHHHHHHhc
Confidence 5679999999999999999999998887654
No 260
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.64 E-value=6.1e-14 Score=144.88 Aligned_cols=216 Identities=14% Similarity=0.119 Sum_probs=139.5
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccC--CCC
Q 010250 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS--IKP 333 (514)
Q Consensus 256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~g--v~p 333 (514)
+.+++++++... +. .|++-...+-++ ..| +++|+++|++||++|++|++|+ +|-.|-....+.++ -..
T Consensus 208 D~d~l~~~~~~~---~p-lvii~g~S~~~~-~~d----l~~i~eia~~~gA~L~VD~AH~-~Gligg~~~~~~~~~~~~~ 277 (493)
T PRK13580 208 DYDEIAALAREF---KP-LILVAGYSAYPR-RVN----FAKLREIADEVGAVLMVDMAHF-AGLVAGKVFTGDEDPVPHA 277 (493)
T ss_pred CHHHHHHHHhhc---CC-EEEEeCccccCC-CcC----HHHHHHHHHHcCCEEEEECchh-hceeccccchhhcCCCCCC
Confidence 367888887642 22 344444444444 445 9999999999999999999997 66555211111111 146
Q ss_pred chh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc---cHHHHHHHHH
Q 010250 334 DLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER---NIVEQVNKIA 408 (514)
Q Consensus 334 Div--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~---~~~~~~~~~~ 408 (514)
|++ |++|+|.|. ..|++++++++.+.+... .++.. +...+|..++++. +++.+.++ +..+++.++.
T Consensus 278 D~vtgT~hKaL~GP--~GG~I~~~~~l~~~L~~a----~P~i~--gg~l~p~iAA~av-Al~e~~~~ef~~y~~~l~~Na 348 (493)
T PRK13580 278 DIVTTTTHKTLRGP--RGGLVLAKKEYADAVDKG----CPLVL--GGPLPHVMAAKAV-ALAEARTPEFQKYAQQVVDNA 348 (493)
T ss_pred cEEEeCChhhccCC--CeEEEEecHHHHHHHhhC----CCccc--CCCccHHHHHHHH-HHHHHhCccHHHHHHHHHHHH
Confidence 766 567999763 357888899998888531 12222 2223343333344 45555433 3688999999
Q ss_pred HHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe-------e----CCEEE
Q 010250 409 PKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV-------S----GDNIM 477 (514)
Q Consensus 409 ~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~-------~----g~~iR 477 (514)
++|++.|++. .++++.. .....++.+++.+... ....+.+.|.+.||++.. . ...||
T Consensus 349 ~~La~~L~~~-G~~vv~g-gTdshIV~V~lg~~~~----------~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLR 416 (493)
T PRK13580 349 RALAEGFLKR-GARLVTG-GTDNHLVLIDVTSFGL----------TGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIR 416 (493)
T ss_pred HHHHHHHHhc-CCCccCC-CCCCCEEEEEeCCHHH----------HHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEE
Confidence 9999999876 3333211 0234667777754321 133566789999999862 2 24699
Q ss_pred EeCCC----CCCHHHHHHHHHHHHHHHHH
Q 010250 478 MSPPF----IMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 478 i~p~~----~~t~e~id~~~~~l~~~l~~ 502 (514)
|+++. .++++|++++++.|.++++.
T Consensus 417 Ig~~A~ttrg~teedi~~iad~l~~~l~~ 445 (493)
T PRK13580 417 LGTPALTTLGMGSDEMDEVAELIVKVLSN 445 (493)
T ss_pred eccchhhhcCCCHHHHHHHHHHHHHHHHh
Confidence 99988 55799999999999888764
No 261
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.63 E-value=2.3e-14 Score=134.14 Aligned_cols=333 Identities=16% Similarity=0.136 Sum_probs=205.9
Q ss_pred EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHH
Q 010250 101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVK 180 (514)
Q Consensus 101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk 180 (514)
...|+-|-.-+ -.-.+.++||.++...-..| +..+...+|+++.++++ +.+-.+|.+||+..|..|++
T Consensus 22 ~~vDLRSDTvT----~PTdeMr~am~eA~vgDdVy-----GeD~tt~rLE~~vA~l~---GKEAgLFv~SGTmgNllaIm 89 (384)
T KOG1368|consen 22 RSVDLRSDTVT----VPTDEMRRAMAEASVGDDVY-----GEDPTTNRLEQRVAELF---GKEAGLFVPSGTMGNLLAIM 89 (384)
T ss_pred ecccccccccc----CChHHHHHHHhhcccCcccc-----cCCccHHHHHHHHHHHh---CccceeeecccccccHHHHH
Confidence 45677665432 23457788887765322211 23445678999999998 55789999999999999998
Q ss_pred HHHHHHhhcCCCCccEEEEEecC-Ccccceeeee-cCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250 181 LVWYYNNALGRPNKKKFIARQKS-YHGSTLIAAS-LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258 (514)
Q Consensus 181 ~a~~~~~~~~~~~~~~ii~~~~~-yHG~t~~~~~-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (514)
.=+. .+...||.=+.+ .|-+-.++++ +++.... +. . + ++....+++
T Consensus 90 ~Hc~-------~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~--------tv----~-~------------e~dgtm~le 137 (384)
T KOG1368|consen 90 VHCH-------QRGSEIIVGDRAHIHRYEQGGISQLAGVHVR--------TV----K-N------------ENDGTMDLE 137 (384)
T ss_pred HHhc-------CCCceEEeccchheeehhccChhhhccceeE--------ee----e-e------------CCCCeeeHH
Confidence 6541 123344443222 2333333332 1111000 00 0 0 011223368
Q ss_pred HHHHHHHH----hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc-ccccceecccCCCC
Q 010250 259 NLEDLILK----EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR-LGTMFGCDKYSIKP 333 (514)
Q Consensus 259 ~le~li~~----~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr-~G~~~~~~~~gv~p 333 (514)
++|+.+.. .+...+..|.+|.-++..|-.+.|-+|+.++.+||++||+-|.+|-+-- |-- ....-....+.-..
T Consensus 138 dIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi-~NAavasgV~vk~i~~~f 216 (384)
T KOG1368|consen 138 DIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARI-FNAAVASGVPVKKICSAF 216 (384)
T ss_pred HHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhh-hhHHHHcCCCHHHHHHhh
Confidence 88888763 2223578899999877666566778999999999999999999996532 100 00000111221123
Q ss_pred ch--hchhhhhcCCcccceeE-EeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Q 010250 334 DL--VSFAKALSSAYMPIGAI-LVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPK 410 (514)
Q Consensus 334 Di--v~~sK~l~gG~~pig~v-~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~ 410 (514)
|- +||||+|+ .|+|-+ ++++++++..... +. ..|+.+-.+-+-|++|+.+|+.- -.......++...
T Consensus 217 DSVsiCLSKglg---APVGSViVG~k~FI~kA~~~----RK-alGGGmRQsGvLaaaaLval~~~--~~~L~~dHk~A~~ 286 (384)
T KOG1368|consen 217 DSVSICLSKGLG---APVGSVIVGSKDFIDKARHF----RK-ALGGGMRQSGVLAAAALVALDEN--VPLLRADHKRAKE 286 (384)
T ss_pred hhhhhhhhccCC---CCcccEEEccHHHHHHHHHH----HH-HhcCchhHHHHHHHHHHHHhhcc--hHHHHHHHHHHHH
Confidence 43 48999998 477755 5677887765421 11 23455555667888888888732 2256677777888
Q ss_pred HHhhhhhccCCCceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHHH
Q 010250 411 FQDGVKAFSDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEE 488 (514)
Q Consensus 411 l~~~L~~l~~~~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e~ 488 (514)
+.+.++...+.+ ..+. ....|..+.+....- -.+.++..+.+.|+++.... ..+|+.....+|+++
T Consensus 287 lAe~~~~~~~i~--v~v~a~etNiv~~~l~q~~~----------~~~~l~~~~~k~gi~lm~~~s~r~Rivlh~Qvt~~~ 354 (384)
T KOG1368|consen 287 LAEYINTPEEIR--VEVPAVETNIVNMVLCQARL----------TAEELCKFLEKNGILLMGGASRRIRIVLHHQVTDED 354 (384)
T ss_pred HHHHhcccccee--eecchhhcceeeeecccccC----------CHHHHHHHHHHCCeEEeeccccceEEEEEEecCHHH
Confidence 888877553222 2232 344566666643321 25678999999999998754 459999889999999
Q ss_pred HHHHHHHHHHHH
Q 010250 489 VDELISKYGKAL 500 (514)
Q Consensus 489 id~~~~~l~~~l 500 (514)
++.++..|.+.+
T Consensus 355 ve~~~~~~~k~~ 366 (384)
T KOG1368|consen 355 VEYVKSVLSKKF 366 (384)
T ss_pred HHHHHHHHHHHH
Confidence 999999995444
No 262
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.63 E-value=1.3e-14 Score=149.07 Aligned_cols=236 Identities=16% Similarity=0.158 Sum_probs=146.0
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
.+...+++++|+++++ .+.+++++||++|+..+++... ..+++||+... .||.+..... ....
T Consensus 53 ~p~~~~le~~la~l~g---~~~~~~~~sG~~Ai~~al~al~--------~~Gd~Vl~~~~-~~~~t~~~~~-----~~~~ 115 (380)
T TIGR01325 53 NPTVAAFEERIAALEG---AERAVATATGMSAIQAALMTLL--------QAGDHVVASRS-LFGSTVGFIS-----EILP 115 (380)
T ss_pred CchHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEecC-CcchHHHHHH-----HHHH
Confidence 4557889999999873 3678999999999999997653 23456777654 4454322111 0000
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
.++. .+..++.+ +.+++++.+. +++++|++|.++++.|.+.+ +++|.++|+
T Consensus 116 ~~g~---~v~~v~~~------------------d~~~l~~~i~----~~tklV~le~p~np~g~~~d----l~~I~~la~ 166 (380)
T TIGR01325 116 RFGI---EVSFVDPT------------------DLNAWEAAVK----PNTKLVFVETPSNPLGELVD----IAALAELAH 166 (380)
T ss_pred HhCC---EEEEECCC------------------CHHHHHHhcC----CCceEEEEECCCCCCCeeeC----HHHHHHHHH
Confidence 1111 11111111 1355665553 35789999988888888876 999999999
Q ss_pred hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccc-eeEEeCHHHHHHhhhccCCCCcccccCCCC
Q 010250 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPI-GAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pi-g~v~~~~~i~~~l~~~~~~~~~~~~~~t~~ 379 (514)
++|+++|+||+++.+ .. .......+|+++ ++|.++|++..+ |++++++++++.+.... ..++. .
T Consensus 167 ~~gi~livD~a~~~~-~~-----~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~-----~~~g~--~ 233 (380)
T TIGR01325 167 AIGALLVVDNVFATP-VL-----QQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYL-----RHTGP--A 233 (380)
T ss_pred HcCCEEEEECCCccc-cc-----CCchhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHH-----HhhCC--C
Confidence 999999999998632 11 111233468875 679999854555 66777888877776311 11222 2
Q ss_pred CcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEc
Q 010250 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFA 439 (514)
Q Consensus 380 ~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~ 439 (514)
.+|..+..++..++.+.. ..++..+++..+.+.|++.. .+|... ...|.|.++.|++.
T Consensus 234 ~~p~~a~~~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~ 306 (380)
T TIGR01325 234 MSPFNAWVLLKGLETLSL--RMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA 306 (380)
T ss_pred CCHHHHHHHHhccCcHHH--HHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC
Confidence 356666666666665543 24555556666666665432 122211 12467889999986
No 263
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.63 E-value=4.4e-14 Score=145.28 Aligned_cols=321 Identities=13% Similarity=0.052 Sum_probs=185.2
Q ss_pred CHH-HHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeC-ChhHHHHHHHHHHHHHHhhcCCCCcc
Q 010250 118 EPR-LVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTN-SGSEANDTQVKLVWYYNNALGRPNKK 195 (514)
Q Consensus 118 ~p~-v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~-sGseA~~~Alk~a~~~~~~~~~~~~~ 195 (514)
+|+ |++|+.+..-...+... .......+..+.|++++...+.++|+|+. |||++++.++...+ .+++
T Consensus 24 ~~~~v~~a~~~~~~~~~hr~~---~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~--------~~~~ 92 (378)
T PRK03080 24 RPGWQLEALADALLGRSHRQK---PVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLL--------GARR 92 (378)
T ss_pred ChHHHHHHHHhhhcccCcCCH---HHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcC--------CCCc
Confidence 577 88888765421111111 12345567778888888533345788875 99999999997653 2122
Q ss_pred EEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEE
Q 010250 196 KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAF 275 (514)
Q Consensus 196 ~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aav 275 (514)
..++. .+.||........- +.+.. .+..++.+. . .. -++++ +.. ...|
T Consensus 93 ~~vi~-~g~f~~~~~~~~~~-----~~g~~----~v~~~~~~~--g-----~~---------~d~~~-i~~-----~~~V 140 (378)
T PRK03080 93 VDHLA-WESFGSKWATDVVK-----QLKLE----DPRVLEADY--G-----SL---------PDLSA-VDF-----DRDV 140 (378)
T ss_pred ceEEE-eCHHHHHHHHHHHh-----hcCCC----CceEeccCC--C-----CC---------CCHhh-cCC-----CCCE
Confidence 23333 45666532211000 00000 011111110 0 00 01111 111 1235
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeEE
Q 010250 276 IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAIL 353 (514)
Q Consensus 276 ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~ 353 (514)
.+-.+.+.+|.+.| +++|.+ ++||+++|+|-+|+ +|.. . ++..+ .|++++| |+|++. ..+|+++
T Consensus 141 ~~~h~~t~tG~~~p----i~~I~~--~~~g~~~vVDa~qs-~G~~--p--idv~~--iD~~~~s~~K~l~~P-~G~g~l~ 206 (378)
T PRK03080 141 VFTWNGTTTGVRVP----VARWIG--ADREGLTICDATSA-AFAL--P--LDWSK--LDVYTFSWQKVLGGE-GGHGMAI 206 (378)
T ss_pred EEEecCCccceecc----chhhcc--ccCCCeEEEecccc-cccC--C--CCHHH--CcEEEEehhhhCCCC-CceEEEE
Confidence 66667777788988 888888 78999999999998 5433 2 22222 4888766 999885 4589999
Q ss_pred eCHHHHHHhhhccCCC---------------CcccccCCCCCc-HHHHHHHHHHHHHHhhc-c---HHHHHHHHHHHHHh
Q 010250 354 VSPEVSEVIHSQSNTL---------------GSFSHGFTYSGH-PVSCAVAIEALKIYKER-N---IVEQVNKIAPKFQD 413 (514)
Q Consensus 354 ~~~~i~~~l~~~~~~~---------------~~~~~~~t~~~~-pl~~aaa~aal~~~~~~-~---~~~~~~~~~~~l~~ 413 (514)
++++..+.+.+..... .....++|++.. ..+..+..++|+.+.+. + +.++.+++.+++++
T Consensus 207 v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~ 286 (378)
T PRK03080 207 LSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYD 286 (378)
T ss_pred ECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 9999988876421000 000112233333 34455557788888764 3 45677788888888
Q ss_pred hhhhccCCCcee--EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCCCH
Q 010250 414 GVKAFSDSPIIG--EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSP 486 (514)
Q Consensus 414 ~L~~l~~~~~~~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~t~ 486 (514)
.|+++....... .-...+.++.+.+++... .....+...+.++|+++..+ ++.+|+++...+|+
T Consensus 287 ~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~---------~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~t~ 357 (378)
T PRK03080 287 WAEKTPWATPLVADPATRSNTSVTLDFVDAQA---------AVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTVEP 357 (378)
T ss_pred HHHhCCCcccccCCccccCccEEEEEcCCchH---------HHHHHHHHHHHHcCCeeccccccCCCCcEEEecCCCCCH
Confidence 888763221111 111122456665543100 01223556677778887642 35699999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 010250 487 EEVDELISKYGKALKATE 504 (514)
Q Consensus 487 e~id~~~~~l~~~l~~~~ 504 (514)
+||+.+++.|++++++++
T Consensus 358 ~di~~l~~al~~~~~~~~ 375 (378)
T PRK03080 358 ADVEALTPWLDWAFERLK 375 (378)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999877654
No 264
>PLN02242 methionine gamma-lyase
Probab=99.63 E-value=1.8e-14 Score=149.31 Aligned_cols=238 Identities=14% Similarity=0.185 Sum_probs=146.6
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 221 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~ 221 (514)
..+...+|++++++++ +.+.+++++||++|+..++.... ..++.||+.++.|.+......... .
T Consensus 74 ~~Pt~~~LE~~lA~l~---g~~~~l~~~sG~~Ai~~al~al~--------~~GD~Vl~~~~~Y~~~~~~~~~~~-----~ 137 (418)
T PLN02242 74 FNPTVLNLGRQMAALE---GTEAAYCTASGMSAISSVLLQLC--------SSGGHVVASNTLYGGTHALLAHFL-----P 137 (418)
T ss_pred CChhHHHHHHHHHHHh---CCCeEEEEccHHHHHHHHHHHHh--------CCCCEEEEcCCcHHHHHHHHHHhh-----h
Confidence 3566789999999987 44678999999999999998664 335678888887755421100000 0
Q ss_pred CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250 222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 301 (514)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~ 301 (514)
..++. .+..++.. +.+++++++. ++++.+|++|.++++.|.+.+ +++|.++|
T Consensus 138 ~~~G~---~~~~~d~~------------------d~e~l~~~i~---~~~tklV~lesp~NPtG~v~d----l~~I~~la 189 (418)
T PLN02242 138 RKCNI---TTTFVDIT------------------DLEAVKKAVV---PGKTKVLYFESISNPTLTVAD----IPELARIA 189 (418)
T ss_pred hccCc---eEEEcCCC------------------CHHHHHHhcC---cCCCEEEEEecCCCCCCcccC----HHHHHHHH
Confidence 00010 00001110 1466666663 224788999998888898876 99999999
Q ss_pred HhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccc-eeEEeCHHHHHHhhhccCCCCccccc--C
Q 010250 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPI-GAILVSPEVSEVIHSQSNTLGSFSHG--F 376 (514)
Q Consensus 302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pi-g~v~~~~~i~~~l~~~~~~~~~~~~~--~ 376 (514)
++||+++|+||+|+.+ ... ...+| .|++ +++|.++|++.++ |++++++++++.+... ..+ .
T Consensus 190 ~~~gi~livDea~~~~-~~~----~~~~g--~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~-------~~~~~~ 255 (418)
T PLN02242 190 HEKGVTVVVDNTFAPM-VLS----PARLG--ADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDL-------HHGALM 255 (418)
T ss_pred HHhCCEEEEECCCCcc-CCC----HHHcC--CcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHH-------hhhhhh
Confidence 9999999999999743 221 11223 4665 5789998765674 7888899888887632 111 1
Q ss_pred CCCCcHHHHHHHHHH--HHHHhhccHHHHHHHHHHHHHhhhhhcc---CCCcee----------EE---EeeeeeEEEEE
Q 010250 377 TYSGHPVSCAVAIEA--LKIYKERNIVEQVNKIAPKFQDGVKAFS---DSPIIG----------EI---RGTGLILGTEF 438 (514)
Q Consensus 377 t~~~~pl~~aaa~aa--l~~~~~~~~~~~~~~~~~~l~~~L~~l~---~~~~~~----------~v---~g~g~~~~i~~ 438 (514)
.++..+....|++.+ ++.+. ...++..++++++.+.|++.. .+|... .. .|.|.++.|++
T Consensus 256 ~~g~~~~~~~A~l~~~~l~tl~--~r~~~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l 333 (418)
T PLN02242 256 LLGPTMNPKVAFELSERLPHLS--LRMKEHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDM 333 (418)
T ss_pred ccCCCCCHHHHHHHHcCCCcHH--HHHHHHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEE
Confidence 112222223333322 22222 235677778888888887651 122211 12 36788999999
Q ss_pred c
Q 010250 439 A 439 (514)
Q Consensus 439 ~ 439 (514)
.
T Consensus 334 ~ 334 (418)
T PLN02242 334 D 334 (418)
T ss_pred C
Confidence 5
No 265
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.62 E-value=1.8e-13 Score=141.57 Aligned_cols=353 Identities=16% Similarity=0.182 Sum_probs=187.1
Q ss_pred CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250 97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 176 (514)
Q Consensus 97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~ 176 (514)
.-|..||||.+-.++ ..+.+++.+++...... | .......+|++.+++++ +.+.+++++||++|+.
T Consensus 17 ~~~~v~iDlltds~t-------~ams~~~~~a~~~gd~~---Y-~~~~g~~~Leeaia~~~---g~~~vv~t~~Gt~Al~ 82 (431)
T cd00617 17 RSEDVYIDLLTDSGT-------GAMSDYQWAAMMLGDEA---Y-AGSKSFYDLEDAVQDLF---GFKHIIPTHQGRGAEN 82 (431)
T ss_pred CCCCcCCCCCCCCCc-------HHHHHHHHHHHHhCCCc---c-CCCCCHHHHHHHHHHHH---CCCeEEEcCCHHHHHH
Confidence 356788999876543 34555555555443221 1 13344678999999998 4578999999999999
Q ss_pred HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHH
Q 010250 177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 256 (514)
Q Consensus 177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (514)
.++++.. .++ +. |...+.|..+.......++.+.... ... .... .....|++ ..+
T Consensus 83 la~~al~-------~pG-D~-V~~~~~f~~~~~~i~~~Ga~pv~v~-i~~--~~~~--~~~~pf~g-----------niD 137 (431)
T cd00617 83 ILFSILL-------KPG-RT-VPSNMHFDTTRGHIEANGAVPVDLV-IDE--AHDA--QELIPFKG-----------NID 137 (431)
T ss_pred HHHHHhC-------CCC-CE-EccCCcccchHHHHHhCCCEeEEEe-ccc--cccc--ccccCCCC-----------CcC
Confidence 9987652 133 34 4455555443222222222222110 000 0000 00001111 123
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc----------ccccccce
Q 010250 257 ANNLEDLILKEGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF----------GRLGTMFG 325 (514)
Q Consensus 257 ~~~le~li~~~~~~~~aavivEpv-~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~----------gr~G~~~~ 325 (514)
+++|++++.+.+.+++++|+++-. +..+|. +.+.+.|++|+++|++||++||.|+++.-. |..+....
T Consensus 138 ~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~-~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ 216 (431)
T cd00617 138 VAKLEKLIDEVGAENIPYIVLTITNNTAGGQ-PVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIA 216 (431)
T ss_pred HHHHHHHhCcccCCCccEEEEECCcCCCCCc-cCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHH
Confidence 688888887543345777777644 444565 456788999999999999999999996511 11111100
Q ss_pred ecccCCCCchhchhhh--hcC---Ccccce-eEEeCH-HHHHHhhhccCCCCcccccCCCCC-cHHHHHHHHHHHHHHhh
Q 010250 326 CDKYSIKPDLVSFAKA--LSS---AYMPIG-AILVSP-EVSEVIHSQSNTLGSFSHGFTYSG-HPVSCAVAIEALKIYKE 397 (514)
Q Consensus 326 ~~~~gv~pDiv~~sK~--l~g---G~~pig-~v~~~~-~i~~~l~~~~~~~~~~~~~~t~~~-~pl~~aaa~aal~~~~~ 397 (514)
.+.-.+.+++|+ |++ +..++| ++++++ ++++.++.... ......++++ ++.-+++...+|+...+
T Consensus 217 ----ei~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~~l~~~~~~~~~---~~~~~~~~gG~~~r~~~A~A~gL~e~~~ 289 (431)
T cd00617 217 ----EIAREMFSYADGCTMSAKKDGLVNIGGFLALRDDELYEEARQRVV---LYEGFVTYGGMAGRDMEALAQGLREAVE 289 (431)
T ss_pred ----HHHHHhhccCCEEEEEeecCCCCccceEEEeCcHHHHHHHHHhcc---ccCCccccccccHHHHHHHHHHHHhccc
Confidence 000011234442 221 113455 677775 58888764210 0111123333 22223332225554222
Q ss_pred ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHH-HHHHHCCcEEEee----
Q 010250 398 RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFG-AQCEKHGMLVRVS---- 472 (514)
Q Consensus 398 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~Gv~~~~~---- 472 (514)
.+..++..+..++|.+.|++. ..|++.. .-|.++.++...-.. . .+.+.-.+..++ ..+.+.||.+...
T Consensus 290 ~~~l~~~~~~r~~l~~~L~~~-G~~v~~P--~Ggh~v~~d~~~~~~-~--~~~~~~~~~~la~~L~~e~gV~~~~~g~~~ 363 (431)
T cd00617 290 EDYLRHRVEQVRYLGDRLDEA-GVPIVEP--AGGHAVFIDAREFLP-H--IPQEQFPAQALAAELYLEAGVRAVELGIFS 363 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCCccCC--CcceEEEEEhHHhcC-C--CCcccCcHHHHHHHHHHHcCeeEEeeccee
Confidence 233333333458888888876 4444432 234455555443110 0 000000234455 4455667775421
Q ss_pred -------C-------CEEEEeCCC-CCCHHHHHHHHHHHHHHHHH
Q 010250 473 -------G-------DNIMMSPPF-IMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 473 -------g-------~~iRi~p~~-~~t~e~id~~~~~l~~~l~~ 502 (514)
+ +.+|++.|. ..|.+++|.+.+.|.+.+++
T Consensus 364 ~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 364 AGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred cccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 1 459999886 67999999999999888765
No 266
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.61 E-value=2e-13 Score=141.45 Aligned_cols=344 Identities=13% Similarity=0.063 Sum_probs=199.0
Q ss_pred CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCC-CeEEE--eCChhHHHHHHHHHHHHHHhh----c
Q 010250 117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKM-AKVFF--TNSGSEANDTQVKLVWYYNNA----L 189 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~-~~v~~--~~sGseA~~~Alk~a~~~~~~----~ 189 (514)
.+|++.+++.+.+..........+...+...+..+.++++++.... +++.| ++||||||..|++.++..... .
T Consensus 53 ~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~ 132 (431)
T TIGR01788 53 MEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAA 132 (431)
T ss_pred CCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5889999998888643222111222335556677778888753212 35665 799999999999888643211 1
Q ss_pred CCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC
Q 010250 190 GRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP 269 (514)
Q Consensus 190 ~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~ 269 (514)
+.......|+.+..-|-+...+....+.. +..++.... -...+.++|++.+.
T Consensus 133 g~~~~~~~ii~s~~~H~sv~ka~~~lg~~------------v~~i~~d~~------------~~~vd~~~L~~~i~---- 184 (431)
T TIGR01788 133 GKPTDKPNLVMGSNVQVCWEKFARYFDVE------------LREVPMDPG------------RYVIDPEQVVEAVD---- 184 (431)
T ss_pred CCCCCCcEEEEcCcchHHHHHHHHHcCce------------eEEEecCCC------------ceeeCHHHHHHHHh----
Confidence 11111235666666666544333222211 111111100 00123577888775
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc------CCEEEEechhcCccc---ccc-cceecccCCCCchhchh
Q 010250 270 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY------DILFIADEVICAFGR---LGT-MFGCDKYSIKPDLVSFA 339 (514)
Q Consensus 270 ~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~------gillI~DEv~tG~gr---~G~-~~~~~~~gv~pDiv~~s 339 (514)
+++.+|++.-++++.|.+.| +++|.++|++| |+++++|-+|.|+-. .++ .+.+. ....|.++++
T Consensus 185 ~~t~lV~~t~g~t~tG~idp----i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~--~~~~DSis~s 258 (431)
T TIGR01788 185 ENTIGVVCILGTTYTGEYED----VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR--LPRVKSINVS 258 (431)
T ss_pred hCCeEEEEEeCCCCCcccCC----HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC--CCCceEEEEC
Confidence 34678888889999999998 99999999999 999999999987421 222 11111 1235777776
Q ss_pred --hhhcCCcccceeEEeCHH--HHHHhhhccCCCCcccccCCCCCc-H-HHHHHHHHHHHHHhh---ccHHHHHHHHHHH
Q 010250 340 --KALSSAYMPIGAILVSPE--VSEVIHSQSNTLGSFSHGFTYSGH-P-VSCAVAIEALKIYKE---RNIVEQVNKIAPK 410 (514)
Q Consensus 340 --K~l~gG~~pig~v~~~~~--i~~~l~~~~~~~~~~~~~~t~~~~-p-l~~aaa~aal~~~~~---~~~~~~~~~~~~~ 410 (514)
|.+.+. ..+|+++.++. +.+.+.....+.+.-....|..++ + .........|..+.. +++.++..++.++
T Consensus 259 ~HK~~~~P-~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~ 337 (431)
T TIGR01788 259 GHKYGLVY-PGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARY 337 (431)
T ss_pred chhccCCC-CCcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Confidence 765455 67899988754 333332111111110001122222 2 122334444444433 3456777888889
Q ss_pred HHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE----ee---CC-EEEEeCCC
Q 010250 411 FQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----VS---GD-NIMMSPPF 482 (514)
Q Consensus 411 l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~---g~-~iRi~p~~ 482 (514)
|.++|+++....++... ....++.|.+.+.... .. ....+.+.|.++|+.+. |. |. .+|++...
T Consensus 338 l~~~L~~~~~~el~~~~-~~~~iV~Fr~~~~~~~------~~-~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~ 409 (431)
T TIGR01788 338 LAEEIAKLGPFEIISDG-SGIPLVAFKLKDDADP------GY-TLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVRE 409 (431)
T ss_pred HHHHHHhCCCEEEeeCC-CCceEEEEEeCCCCCC------Cc-CHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecC
Confidence 99988876332222211 1344556666532110 01 13457889999998642 21 22 48988766
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q 010250 483 IMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 483 ~~t~e~id~~~~~l~~~l~~~ 503 (514)
.++++.++++++.|+.++..+
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 410 GFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred CCCHHHHHHHHHHHHHHHHhh
Confidence 788999999999999988764
No 267
>PRK02769 histidine decarboxylase; Provisional
Probab=99.59 E-value=1.1e-12 Score=134.24 Aligned_cols=294 Identities=18% Similarity=0.143 Sum_probs=180.0
Q ss_pred CchHHHHHHHHHHhcCcCCCC-eEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250 143 TKPSLDLAKELLEMFTASKMA-KVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 221 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~-~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~ 221 (514)
.+...+..+.++++++....+ ..+|+++|||||..|+..+|.+. + ...|+.+..-|.+...+...-+....
T Consensus 64 ~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~-----~--~~~ii~s~~~H~Sv~ka~~~lg~~~~- 135 (380)
T PRK02769 64 FDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELF-----P--DGTLYYSKDTHYSVSKIARLLRIKSR- 135 (380)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhC-----C--CcEEEeCCCceehHHHHHHHcCCCCc-
Confidence 344556777778887532222 25899999999999998887431 2 23455556666665433332222111
Q ss_pred CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250 222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 301 (514)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~ 301 (514)
.+++.+. ...+.++|++++.+. ...+.+|++.-..++.|.+.| +++|.++|
T Consensus 136 -----------~V~~~~~-------------g~id~~~L~~~i~~~-~~~t~lvv~t~gtt~tG~idp----i~~I~~i~ 186 (380)
T PRK02769 136 -----------VITSLPN-------------GEIDYDDLISKIKEN-KNQPPIIFANIGTTMTGAIDN----IKEIQEIL 186 (380)
T ss_pred -----------eeccCCC-------------CcCcHHHHHHHHHhC-CCCcEEEEEEeCCCCCcccCC----HHHHHHHH
Confidence 1111100 112367888888754 235778888888999999988 99999999
Q ss_pred HhcC---CEEEEechhcCccccccc---ceecccCCCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCccc
Q 010250 302 KKYD---ILFIADEVICAFGRLGTM---FGCDKYSIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS 373 (514)
Q Consensus 302 ~~~g---illI~DEv~tG~gr~G~~---~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~ 373 (514)
++|| +++++|-+|.|+ ..-.. ..++... ..|.++++ |.+++. .++|+++.+++..+.+.........
T Consensus 187 ~~~g~~~~~lHVDaA~gg~-~~p~~~~~~~~d~~~-~vDsis~s~HK~~~~P-~g~G~l~~r~~~~~~~~~~~~yl~~-- 261 (380)
T PRK02769 187 KKIGIDDYYIHADAALSGM-ILPFVNNPPPFSFAD-GIDSIAISGHKFIGSP-MPCGIVLAKKKYVERISVDVDYIGS-- 261 (380)
T ss_pred HHhCCCceEEEEEecccce-eecccCccccCCccC-CCCEEEECCcccCCCC-CCcEEEEEehhhhhhcccCccccCC--
Confidence 9998 699999999864 22100 0111111 46878776 766656 7899999998877665432111111
Q ss_pred ccCCCCCc--HHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCC
Q 010250 374 HGFTYSGH--PVSCAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPF 448 (514)
Q Consensus 374 ~~~t~~~~--pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~ 448 (514)
...|..++ ..+.++..++|+.+..+ +..++..++.+++.++|++. +.... ...... .+.|....
T Consensus 262 ~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~--~~p~~~--~v~f~~~~------ 330 (380)
T PRK02769 262 RDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAW--RNPNSI--TVVFPCPS------ 330 (380)
T ss_pred CCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEE--cCCCce--EEEEcCCC------
Confidence 11233333 34556666777776654 35677888888898988764 22211 111222 22333211
Q ss_pred CCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 449 PPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 449 ~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
..+ .+|..+.+.++.+|+.....+|+|.||++++-|.+.+.
T Consensus 331 -------~~~-----~~~w~l~~~~~~~hi~~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 331 -------ERI-----WKKWHLATSGNQAHIITMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred -------HHH-----HhCeeEcccCCEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 011 15666666666788888888899999999998887764
No 268
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.59 E-value=8.6e-14 Score=142.02 Aligned_cols=303 Identities=16% Similarity=0.102 Sum_probs=168.5
Q ss_pred CCCCCHHHHHHHHHHHhcCC-cccc-cc--c-cCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhh
Q 010250 114 LGGSEPRLVAAATAQLNTLP-FYHS-FW--N-RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNA 188 (514)
Q Consensus 114 lGh~~p~v~~A~~~~l~~~~-~~~~-~~--~-~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~ 188 (514)
.|.-++.|++|+.+.+.... ..+. .. + ...+...++.+++++++. .+.+.++|++|+++|++.+++......
T Consensus 7 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g-~~~~~v~~~~g~t~a~~~~l~~l~~~~-- 83 (353)
T TIGR03235 7 TTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALG-ADTEEVIFTSGATESNNLAILGLARAG-- 83 (353)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEeCCHHHHHHHHHHHHHHhc--
Confidence 34568999999998875421 1111 00 0 112345678888998874 345789999999999999987664220
Q ss_pred cCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC
Q 010250 189 LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG 268 (514)
Q Consensus 189 ~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~ 268 (514)
..++++.||+. ...|.+.......... .+ ..+..++.+..+ ..+.+++++.+.
T Consensus 84 -~~~g~~~vi~~-~~~~~s~~~~~~~~~~------~G---~~v~~v~~~~~~-------------~~d~~~l~~~l~--- 136 (353)
T TIGR03235 84 -EQKGKKHIITS-AIEHPAVLEPIRALER------NG---FTVTYLPVDESG-------------RIDVDELADAIR--- 136 (353)
T ss_pred -ccCCCCeeeEc-ccccHHHHHHHHHHHh------cC---CEEEEEccCCCC-------------cCCHHHHHHhCC---
Confidence 11233445554 4444432211111000 00 001111111100 112466766663
Q ss_pred CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCc
Q 010250 269 PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAY 346 (514)
Q Consensus 269 ~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~ 346 (514)
+++.+|++..+++.+|.+.| +++|.++|++||+++|+|++|+ +|.. . .+......|+++++ |.+ |.
T Consensus 137 -~~~~lv~~~~~~n~tG~~~~----~~~I~~l~~~~~~~~ivD~a~~-~g~~--~--~~~~~~~~D~~~~s~~K~~-gp- 204 (353)
T TIGR03235 137 -PDTLLVSIMHVNNETGSIQP----IREIAEVLEAHEAFFHVDAAQV-VGKI--T--VDLSADRIDLISCSGHKIY-GP- 204 (353)
T ss_pred -CCCEEEEEEcccCCceeccC----HHHHHHHHHHcCCEEEEEchhh-cCCc--c--ccccccCCCEEEeehhhcC-CC-
Confidence 35678888889999999987 8999999999999999999997 5443 1 22222346888766 964 32
Q ss_pred ccceeEEeCHHHHHHhhhccCCCC-ccccc-CCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHhhhhhccCCC
Q 010250 347 MPIGAILVSPEVSEVIHSQSNTLG-SFSHG-FTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDGVKAFSDSP 422 (514)
Q Consensus 347 ~pig~v~~~~~i~~~l~~~~~~~~-~~~~~-~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~ 422 (514)
..+|+++++++............+ ..... .....++...++..++++.+.+ ++..++++++.++++++|++. +..
T Consensus 205 ~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~-g~~ 283 (353)
T TIGR03235 205 KGIGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQTL-GVK 283 (353)
T ss_pred CceEEEEEccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccC-CeE
Confidence 347899998875322110000000 00000 1123345555666677776643 356788888888998888763 222
Q ss_pred ceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee
Q 010250 423 IIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS 472 (514)
Q Consensus 423 ~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~ 472 (514)
+.... .....+..+.+... ..+.+...|. +||.++++
T Consensus 284 ~~~~~~~~~~~i~~~~~~~~------------~~~~v~~~L~-~~i~v~~g 321 (353)
T TIGR03235 284 LNGDPAETIPHILNFSIDGV------------NSEALIVNLR-ADAAVSTG 321 (353)
T ss_pred EeCCcccccCCEEEEEeCCc------------CHHHHHHHHh-CCeEEEch
Confidence 22111 11223444443211 1345666775 48888754
No 269
>PLN02368 alanine transaminase
Probab=99.59 E-value=1.4e-13 Score=142.32 Aligned_cols=249 Identities=15% Similarity=0.096 Sum_probs=151.8
Q ss_pred chHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 144 KPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 144 ~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
+....+++.+.+..+ ....++|++++|+++|+..++.... . ..++.|++.+++|..........++...
T Consensus 111 ~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~------~-~pGd~Vli~~P~Y~~y~~~~~~~g~~~v--- 180 (407)
T PLN02368 111 GVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVI------R-GEKDGVLVPVPQYPLYSATISLLGGTLV--- 180 (407)
T ss_pred HHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHc------C-CCCCEEEEeCCCCccHHHHHHHcCCEEE---
Confidence 444455555544322 1356799999999999999887652 1 2357899999999987544333322211
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC---CCcEEEEEEccccCCCCcccCChhHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG---PETIAAFIAEPVIGAGGVIPPPATYFEKVQA 299 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~---~~~~aavivEpv~~~~G~~~p~~~~L~~l~~ 299 (514)
.+++... +.| ..++++|++.+.... .+..+.+++.| +|.+|.+ .+++.+++|.+
T Consensus 181 ----------~v~~~~~----------~~~-~~d~~~le~~i~~~~~~~~~~k~l~l~nP-~NPTG~v-~s~e~l~~l~~ 237 (407)
T PLN02368 181 ----------PYYLEES----------ENW-GLDVNNLRQSVAQARSKGITVRAMVIINP-GNPTGQC-LSEANLREILK 237 (407)
T ss_pred ----------EEecccc----------cCC-CCCHHHHHHHHHHHhhcCCCeEEEEEECC-CCCCCcc-CCHHHHHHHHH
Confidence 0111000 000 012477777765321 12234666777 5556654 46789999999
Q ss_pred HHHhcCCEEEEechhcCcccccc-cc-ee-ccc-CCC------Cchh---chhhhhc-CCcccceeEEe---CHHHHHHh
Q 010250 300 VVKKYDILFIADEVICAFGRLGT-MF-GC-DKY-SIK------PDLV---SFAKALS-SAYMPIGAILV---SPEVSEVI 362 (514)
Q Consensus 300 l~~~~gillI~DEv~tG~gr~G~-~~-~~-~~~-gv~------pDiv---~~sK~l~-gG~~pig~v~~---~~~i~~~l 362 (514)
+|++||+++|.||+|..+...|. .+ .. +.. ++. +.++ +|||.+. -.++++|++++ ++++++.+
T Consensus 238 ~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~ 317 (407)
T PLN02368 238 FCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEI 317 (407)
T ss_pred HHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHH
Confidence 99999999999999998754442 11 11 110 111 1333 5799873 22299999984 88888888
Q ss_pred hhccCCCCcccccCCCCCcHHHHHHHHHHHHH-----------Hhh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEee
Q 010250 363 HSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI-----------YKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT 430 (514)
Q Consensus 363 ~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~-----------~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~ 430 (514)
... ...+++.+.+++.++.++|+. .++ +++.+.++++++.+.+.|+++ +.+......
T Consensus 318 ~~~--------~~~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~---~g~~~~~P~ 386 (407)
T PLN02368 318 YKV--------ASIALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSC---KNVVCNFTE 386 (407)
T ss_pred HHH--------hcccCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCeEeCCCC
Confidence 641 123456777888888888752 111 235677788888888888876 334344456
Q ss_pred eeeEEE
Q 010250 431 GLILGT 436 (514)
Q Consensus 431 g~~~~i 436 (514)
|.|+.+
T Consensus 387 Gafy~~ 392 (407)
T PLN02368 387 GAMYSF 392 (407)
T ss_pred eeeEec
Confidence 665543
No 270
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.57 E-value=1.3e-13 Score=142.26 Aligned_cols=235 Identities=17% Similarity=0.148 Sum_probs=151.1
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP 218 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~ 218 (514)
..+...+++++|+++.+ .+.++.++||++|+..++.... ..+++||+..+.|++..... +...|..
T Consensus 62 ~~p~~~~le~~lA~l~g---~~~~i~~ssG~~Ai~~~l~all--------~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~ 130 (398)
T PRK08249 62 TNPTVQAFEEKVRILEG---AEAATAFSTGMAAISNTLYTFL--------KPGDRVVSIKDTYGGTNKIFTEFLPRMGVD 130 (398)
T ss_pred CChHHHHHHHHHHHHhC---CCeEEEeCChHHHHHHHHHHhc--------CCCCEEEEcCCchHHHHHHHHHHHhhCCeE
Confidence 34556889999999873 4578999999999999987553 23568999999997642110 1111110
Q ss_pred cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250 219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 298 (514)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~ 298 (514)
. ..++. .+.+++++++. +++++|++|.+.+..|.+.+ +++|.
T Consensus 131 v------------~~vd~------------------~d~e~l~~~i~----~~tklV~ie~p~NPtg~v~d----l~~I~ 172 (398)
T PRK08249 131 V------------TLCET------------------GDHEQIEAEIA----KGCDLLYLETPTNPTLKIVD----IERLA 172 (398)
T ss_pred E------------EEcCC------------------CCHHHHHHhcC----CCCeEEEEECCCCCCCccCC----HHHHH
Confidence 0 00110 01456666664 35678888888888898887 99999
Q ss_pred HHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccc-eeEEeCHHHHHHhhhccCCCCccccc
Q 010250 299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPI-GAILVSPEVSEVIHSQSNTLGSFSHG 375 (514)
Q Consensus 299 ~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pi-g~v~~~~~i~~~l~~~~~~~~~~~~~ 375 (514)
++|++||+++|+|+++..+ ..+. ......|++ +++|.++|..-.+ |++++++++++.+... ...
T Consensus 173 ~la~~~gi~livD~t~a~~-~~~~-----~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~-------~~~ 239 (398)
T PRK08249 173 AAAKKVGALVVVDNTFATP-INQN-----PLALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHY-------REI 239 (398)
T ss_pred HHHHHcCCEEEEECCcCcc-ccCC-----chhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHH-------HHh
Confidence 9999999999999998733 1111 112245666 4679998732344 5666788888877532 112
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEcc
Q 010250 376 FTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD 440 (514)
Q Consensus 376 ~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~ 440 (514)
.....+|..++.++..++.+.. ..++..++...+.+.|++.. .+|... ...|.|.++.|++..
T Consensus 240 ~g~~~s~~~a~l~l~~l~tL~~--R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~ 317 (398)
T PRK08249 240 NGATMDPMSAYLILRGMKTLKL--RVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKG 317 (398)
T ss_pred cCCCCCHHHHHHHHhCcchHHH--HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcC
Confidence 3445678888888877776642 34556667777777776531 123221 124678899999863
No 271
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.57 E-value=1.7e-12 Score=133.62 Aligned_cols=313 Identities=13% Similarity=0.142 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEE
Q 010250 119 PRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 198 (514)
Q Consensus 119 p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii 198 (514)
++-.+++.+.++....+ ..+...+|+++++++++ .+.+++++||++|+..+++... . ..+++||
T Consensus 14 ~~e~~~~~~~l~~~~~~------~g~~~~~le~~la~~~g---~~~~v~~~sgt~al~lal~al~------~-~~Gd~Vi 77 (379)
T PRK11658 14 DEELAAVKEVLRSGWIT------TGPKNQALEQAFCQLTG---NQHAIAVSSATAGMHITLMALG------I-GPGDEVI 77 (379)
T ss_pred HHHHHHHHHHHHcCCcc------CCHhHHHHHHHHHHHhC---CCeEEEECCHHHHHHHHHHHcC------C-CCCCEEE
Confidence 55677888877654322 22446889999999873 4578999999999999997651 1 3356899
Q ss_pred EEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEE
Q 010250 199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIA 277 (514)
Q Consensus 199 ~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aaviv 277 (514)
+.+..|.+....... .|... ..++.. +.|. .+.+++++.+. +++.+|+
T Consensus 78 v~~~~~~~~~~~~~~-~G~~~------------v~vd~~~~~~~-------------~d~~~l~~~i~----~~tkav~- 126 (379)
T PRK11658 78 TPSLTWVSTLNMIVL-LGATP------------VMVDVDRDTLM-------------VTPEAIEAAIT----PRTKAII- 126 (379)
T ss_pred ECCCcHHHHHHHHHH-cCCEE------------EEEecCCCcCC-------------cCHHHHHHhcc----cCCeEEE-
Confidence 988888775432222 12111 111110 0000 12467777664 2455555
Q ss_pred ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhchh--hhhcCCcccceeEEe
Q 010250 278 EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILV 354 (514)
Q Consensus 278 Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~ 354 (514)
|++. .|...+ +++|.++|++||+++|+|++|+ |.-..|.. ...+|+ ++.+|+ |.|++| ..|+++.
T Consensus 127 -~~~~-~G~~~d----~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~--~g~~g~--~~~Sf~~~K~l~~g--~GG~v~~ 194 (379)
T PRK11658 127 -PVHY-AGAPAD----LDAIRAIGERYGIPVIEDAAHAVGTYYKGRH--IGARGT--AIFSFHAIKNITCA--EGGLVVT 194 (379)
T ss_pred -EeCC-CCCcCC----HHHHHHHHHHcCCeEEEECCCccCCeECCee--cCCCCC--EEEeCCCCCcCccc--CceEEEE
Confidence 3333 465555 8999999999999999999998 33222221 122333 566666 788764 5666776
Q ss_pred C-HHHHHHhhhc---cCCCC--------------cccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhh
Q 010250 355 S-PEVSEVIHSQ---SNTLG--------------SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK 416 (514)
Q Consensus 355 ~-~~i~~~l~~~---~~~~~--------------~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~ 416 (514)
+ +++.+.+... +.... .+..|+.+..+.+.++.++..++.++ ++.++-+++.+++.+.|+
T Consensus 195 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~--~~~~~r~~~a~~~~~~L~ 272 (379)
T PRK11658 195 DDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKLE--ALNARRREIAARYLQALA 272 (379)
T ss_pred CCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhc
Confidence 4 7777666431 10000 01123334445666666666666543 456777778888888887
Q ss_pred hccCCCce--eE-EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---------------------
Q 010250 417 AFSDSPII--GE-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--------------------- 472 (514)
Q Consensus 417 ~l~~~~~~--~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--------------------- 472 (514)
++....+. .. ....-.++.+.+....... ..+.+.+.|.++||-++..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~ 344 (379)
T PRK11658 273 DLPFQPLSLPAWPHQHAWHLFIIRVDEERCGI--------SRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPN 344 (379)
T ss_pred CCCCccCcCCCCCCceeEEEEEEEECCccccC--------CHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChH
Confidence 65211111 10 0111122334443211000 1456788899999876510
Q ss_pred -----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 473 -----GDNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 473 -----g~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
...|.+-.....|++|++.+++.|++++
T Consensus 345 ~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 345 TEWNSERICSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred HHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 0223333335689999999999998865
No 272
>PRK07049 methionine gamma-lyase; Validated
Probab=99.57 E-value=1.4e-13 Score=143.13 Aligned_cols=239 Identities=14% Similarity=0.096 Sum_probs=152.8
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee---ecCCCcc
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA---SLSGLPA 219 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~---~~s~~~~ 219 (514)
++....|++.|+++.+ .+.+++++||++|+..++.... ..++.|++.++.|.+...... ...|...
T Consensus 82 ~Pt~~~Le~~lA~leg---~~~~iv~~sG~~Ai~~~l~al~--------~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~ 150 (427)
T PRK07049 82 HPNSEIVEDRLAVYEG---AESAALFSSGMSAIATTLLAFV--------RPGDVILHSQPLYGGTETLLAKTFRNFGVGA 150 (427)
T ss_pred CcCHHHHHHHHHHHhC---CCcEEEEccHHHHHHHHHHHHh--------CCCCEEEEcCCCcccHHHHHHHHHHhcCcEE
Confidence 4456789999999873 4579999999999998887654 345689999999988632211 1111110
Q ss_pred ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh-CCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250 220 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 298 (514)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~-~~~~~aavivEpv~~~~G~~~p~~~~L~~l~ 298 (514)
+.+++ .. +.+++++.+.+. ..+++.+|++|..+|++|.+.+ +++|.
T Consensus 151 --------------v~~~~-------~~--------d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d----~~~l~ 197 (427)
T PRK07049 151 --------------VGFAD-------GL--------SEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVD----VAAVR 197 (427)
T ss_pred --------------EEEeC-------CC--------CHHHHHHHHHhhccCCCceEEEEECCCCCCCcccC----HHHHH
Confidence 00110 00 024555555432 1235788999988888898876 67777
Q ss_pred HHHHh------cCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcC-CcccceeEEeCHHHHHHhhhccCCC
Q 010250 299 AVVKK------YDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSS-AYMPIGAILVSPEVSEVIHSQSNTL 369 (514)
Q Consensus 299 ~l~~~------~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~g-G~~pig~v~~~~~i~~~l~~~~~~~ 369 (514)
+++++ +++++|+||++.++.... .. ....|++ +++|.++| +.+++|++++++++++.+...
T Consensus 198 ~la~~~~~~~~~~~~vvvDety~~~~~~~---pl---~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~---- 267 (427)
T PRK07049 198 RVADAIEARQGHRPIIACDNTLLGPVFQK---PL---EHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRAL---- 267 (427)
T ss_pred HHHHHhhhcccCCCEEEEECCccccccCC---cc---ccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHH----
Confidence 77766 899999999976442111 11 1124666 68899995 448999999999988877631
Q ss_pred CcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCce--e----------EEEeeee
Q 010250 370 GSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPII--G----------EIRGTGL 432 (514)
Q Consensus 370 ~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~--~----------~v~g~g~ 432 (514)
........+|..+.+++..|+.+.. ..++..++++.+.+.|++.. .+|.. . ...|.|.
T Consensus 268 ---~~~~g~~ls~~~a~l~~r~L~tl~~--R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~ 342 (427)
T PRK07049 268 ---RSAIGTQLDPHSCWMLGRSLETLVL--RMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGS 342 (427)
T ss_pred ---HHhcCCCCCHHHHHHHHcCCChHHH--HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCcc
Confidence 1112344678888888777765532 24555777777777777542 12311 0 1246688
Q ss_pred eEEEEEcc
Q 010250 433 ILGTEFAD 440 (514)
Q Consensus 433 ~~~i~~~~ 440 (514)
++.|++..
T Consensus 343 ~~s~~~~~ 350 (427)
T PRK07049 343 TFSFDIKG 350 (427)
T ss_pred EEEEEEcC
Confidence 99999863
No 273
>PLN03032 serine decarboxylase; Provisional
Probab=99.56 E-value=1.9e-12 Score=131.46 Aligned_cols=317 Identities=13% Similarity=0.091 Sum_probs=187.7
Q ss_pred CHHHHHHHHHHHhc-CCcccccc--c-cCCchHHHHHHHHHHhcCcCCCCeE--EEeCChhHHHHHHHHHHHHHHhhcCC
Q 010250 118 EPRLVAAATAQLNT-LPFYHSFW--N-RTTKPSLDLAKELLEMFTASKMAKV--FFTNSGSEANDTQVKLVWYYNNALGR 191 (514)
Q Consensus 118 ~p~v~~A~~~~l~~-~~~~~~~~--~-~~~~~~~ela~~L~~~~~~~~~~~v--~~~~sGseA~~~Alk~a~~~~~~~~~ 191 (514)
++.+++++.+.+.+ .+...++. + ...+...+..+.++++++. +.+.+ +|++||||||..|+..+|.+.
T Consensus 36 ~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~-~~~~~~G~fTsGGTEaNl~al~~ar~~~----- 109 (374)
T PLN03032 36 DYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEL-EKDEYWGYITTCGTEGNLHGILVGREVF----- 109 (374)
T ss_pred ChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCC-CCccCCEEEeCchHHHHHHHHHHHHHhC-----
Confidence 45677777777653 22111111 1 2344555677778888753 33444 999999999999999887541
Q ss_pred CCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCc
Q 010250 192 PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPET 271 (514)
Q Consensus 192 ~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~ 271 (514)
+ + .+++.+..-|-+...+....+... ..++.... ...++++|++.+.+.. ..
T Consensus 110 ~-~-~~vi~s~~~H~Sv~kaa~~lg~~~------------~~V~~d~~-------------g~id~~~L~~~i~~~~-~~ 161 (374)
T PLN03032 110 P-D-GILYASRESHYSVFKAARMYRMEA------------VKVPTLPS-------------GEIDYDDLERALAKNR-DK 161 (374)
T ss_pred C-C-cEEEeCCCceeHHHHHHHHcCCCC------------eEeeeCCC-------------CcCcHHHHHHHHHHcC-CC
Confidence 1 1 366777777776554443332211 11222111 1233688888886532 24
Q ss_pred EEEEEEccccCCCCcccCChhHHHHHHHHHHhcC-----CEEEEechhcCcccccccceec--ccCCCCchhchh--hhh
Q 010250 272 IAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD-----ILFIADEVICAFGRLGTMFGCD--KYSIKPDLVSFA--KAL 342 (514)
Q Consensus 272 ~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~g-----illI~DEv~tG~gr~G~~~~~~--~~gv~pDiv~~s--K~l 342 (514)
+.+|++.-.+++.|.+.| +++|.++|++|| +++++|-+|.|+ ..-..-... .+....|.++++ |.+
T Consensus 162 ~~lvv~tagtt~tG~idp----i~eI~~i~~~~g~~~~~~~lHvDaA~gg~-~~p~~~~~~~~~~~~~vDSis~s~HK~~ 236 (374)
T PLN03032 162 PAILNVNIGTTVKGAVDD----LDRILRILKELGYTEDRFYIHCDGALFGL-MMPFVSRAPEVTFRKPIGSVSVSGHKFL 236 (374)
T ss_pred CEEEEEEecCcCCccCCC----HHHHHHHHHHhCCCCCCeeEEEEccchhh-hhhccCCCcccCCCcCCcEEEECccccc
Confidence 667777778888999988 999999999997 489999999754 221000000 011236777776 655
Q ss_pred cCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCc--HHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHhhhhh
Q 010250 343 SSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH--PVSCAVAIEALKIYKERN---IVEQVNKIAPKFQDGVKA 417 (514)
Q Consensus 343 ~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~--pl~~aaa~aal~~~~~~~---~~~~~~~~~~~l~~~L~~ 417 (514)
+.. .++|+++.+++.++.+.....+... ...|..++ ....+...++|+.+-.++ ..++.-++.+++.+.|++
T Consensus 237 g~P-~g~G~ll~r~~~~~~~~~~~~Yl~~--~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~ 313 (374)
T PLN03032 237 GCP-MPCGVALTRKKHVKALSQNVEYLNS--RDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTE 313 (374)
T ss_pred CCC-cCeEEEEEEchhhHhhccCCcccCC--CCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445 7889999998877666432222211 11234333 344556667777766554 466777788888888877
Q ss_pred ccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHH
Q 010250 418 FSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYG 497 (514)
Q Consensus 418 l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~ 497 (514)
. ..... .....+ .+.|..+. . .. ..+|..+.+..+.+++.....++++.||++++-|+
T Consensus 314 ~-~~~~~--~~p~~~--~V~f~~~~------------~----~~-~~~~w~l~~~~~~~hi~vm~~~~~~~id~fi~dl~ 371 (374)
T PLN03032 314 A-GLTCR--LNELSS--TVVFERPM------------D----EA-FIKKWQLACEGDIAHVVVMPNVTVEKLDEFVEELV 371 (374)
T ss_pred C-CCcEE--ECCCce--EEEEcCCC------------c----Hh-HhheeeecccCCEEEEEECCCCCHHHHHHHHHHHh
Confidence 5 22211 111222 23333221 0 11 22465555555678877777788999999998776
Q ss_pred H
Q 010250 498 K 498 (514)
Q Consensus 498 ~ 498 (514)
+
T Consensus 372 ~ 372 (374)
T PLN03032 372 E 372 (374)
T ss_pred c
Confidence 4
No 274
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.56 E-value=2.2e-13 Score=140.83 Aligned_cols=237 Identities=13% Similarity=0.119 Sum_probs=148.0
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP 218 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~ 218 (514)
+.+...+|+++|+++.+ .+.+++++||++|+..++.... ...++||+..+.|.+..... +...|..
T Consensus 62 ~~p~~~~Le~~iA~~~g---~~~~l~~~sG~~Ai~~al~~ll--------~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~ 130 (400)
T PRK06234 62 GNPTSTEVENKLALLEG---GEAAVVAASGMGAISSSLWSAL--------KAGDHVVASDTLYGCTFALLNHGLTRYGVE 130 (400)
T ss_pred CCccHHHHHHHHHHHhC---CCcEEEEcCHHHHHHHHHHHHh--------CCCCEEEEecCccchHHHHHHHHHhhCCeE
Confidence 34556899999999974 3578999999999988886543 23457888777664432111 1111111
Q ss_pred cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250 219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 298 (514)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~ 298 (514)
. ..++.. +++++++.+. +++.+|++|.+++.+|.+.+ +++|.
T Consensus 131 v------------~~vd~~------------------d~e~l~~~i~----~~tklI~iesP~NPtG~v~d----l~~I~ 172 (400)
T PRK06234 131 V------------TFVDTS------------------NLEEVRNALK----ANTKVVYLETPANPTLKVTD----IKAIS 172 (400)
T ss_pred E------------EEECCC------------------CHHHHHHHhc----cCCeEEEEECCCCCCCCcCC----HHHHH
Confidence 0 001100 1466776664 35678888888888898877 99999
Q ss_pred HHHHhc--CCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccc-eeEEeCHHHHHHhhhccCCCCccc
Q 010250 299 AVVKKY--DILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPI-GAILVSPEVSEVIHSQSNTLGSFS 373 (514)
Q Consensus 299 ~l~~~~--gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pi-g~v~~~~~i~~~l~~~~~~~~~~~ 373 (514)
++|+++ |+++|+||++... ..+.. .+...|++ +++|.++|.+.++ |++++++++++.+.... ..
T Consensus 173 ~la~~~~~~i~livDea~~~~-~~~~~-----l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~-----~~ 241 (400)
T PRK06234 173 NIAHENNKECLVFVDNTFCTP-YIQRP-----LQLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFG-----IK 241 (400)
T ss_pred HHHHhcCCCCEEEEECCCCch-hcCCc-----hhhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHH-----HH
Confidence 999997 9999999998732 22221 12245766 4679998744555 78888998888775311 01
Q ss_pred ccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEE
Q 010250 374 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEF 438 (514)
Q Consensus 374 ~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~ 438 (514)
...+...+|..++.++..|+.+.. ..++..++..++.+.|++.. .+|... ...+.|.++.|++
T Consensus 242 ~~~g~~l~p~~a~l~~~~l~tl~~--r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l 319 (400)
T PRK06234 242 DMTGSVIGPFEAFLIIRGMKTLQI--RMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFEL 319 (400)
T ss_pred HhcCCCCCHHHHHHHHhccCcHHH--HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEe
Confidence 112345678888888777765432 34455566666666665421 122111 1235677888888
Q ss_pred cc
Q 010250 439 AD 440 (514)
Q Consensus 439 ~~ 440 (514)
..
T Consensus 320 ~~ 321 (400)
T PRK06234 320 KG 321 (400)
T ss_pred cC
Confidence 63
No 275
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.56 E-value=1.4e-12 Score=137.45 Aligned_cols=286 Identities=14% Similarity=0.152 Sum_probs=162.0
Q ss_pred HHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeec----CCCcccc
Q 010250 146 SLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL----SGLPALH 221 (514)
Q Consensus 146 ~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~----s~~~~~~ 221 (514)
..++.+.++++++ .+.+++.++++|++++++++...+ . .++++|++.++.| ++....+.. .|...
T Consensus 114 ~~e~~~~la~l~g-~~~~~v~~~~g~t~~~~~~~~a~~-~------~~g~~Vlv~~~~~-~~~~~~~~~~~~~~G~~~-- 182 (447)
T PRK00451 114 IFEYQTMICELTG-MDVANASMYDGATALAEAALMAVR-I------TKRKKVLVSGAVH-PEYREVLKTYLKGQGIEV-- 182 (447)
T ss_pred HHHHHHHHHHHhC-CCcceEEecCcHHHHHHHHHHHHH-h------cCCCEEEEeCccC-HHHHHHHHHHHHhCCcEE--
Confidence 3445566788774 345689999999998887775442 1 2345777766544 433222111 11111
Q ss_pred CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250 222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 301 (514)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~ 301 (514)
..++.... ..+.+++++.+. +++++|++... +..|.+.| +++|.++|
T Consensus 183 ----------~~v~~~~~--------------~~d~~~l~~~i~----~~t~~v~l~~p-n~tG~v~~----l~~I~~~a 229 (447)
T PRK00451 183 ----------VEVPYEDG--------------VTDLEALEAAVD----DDTAAVVVQYP-NFFGVIED----LEEIAEIA 229 (447)
T ss_pred ----------EEecCCCC--------------CCCHHHHHHhcC----CCeEEEEEECC-CCCCeeCC----HHHHHHHH
Confidence 11111100 112467777664 35667776654 56788876 99999999
Q ss_pred HhcCCEEEE--echhcCcccccccceecccCCCCchhch-----hhhhcCCcccceeEEeCHHHHHHhhhc---------
Q 010250 302 KKYDILFIA--DEVICAFGRLGTMFGCDKYSIKPDLVSF-----AKALSSAYMPIGAILVSPEVSEVIHSQ--------- 365 (514)
Q Consensus 302 ~~~gillI~--DEv~tG~gr~G~~~~~~~~gv~pDiv~~-----sK~l~gG~~pig~v~~~~~i~~~l~~~--------- 365 (514)
+++|+++|+ |.+..|+ .. ... ....|++++ ||.+.-|++.+|++++++++++.+...
T Consensus 230 ~~~~~~~iv~~d~~~~g~--~~---~~~--~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~ 302 (447)
T PRK00451 230 HAGGALFIVGVDPVSLGL--LK---PPG--EYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDAD 302 (447)
T ss_pred HHCCCEEEEEcChHHhcc--CC---Ccc--cCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccC
Confidence 999999998 6553222 11 111 234577654 454332226789999999888875210
Q ss_pred c-----------CCCCcccccCCC-CCc-HHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEEEe
Q 010250 366 S-----------NTLGSFSHGFTY-SGH-PVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG 429 (514)
Q Consensus 366 ~-----------~~~~~~~~~~t~-~~~-pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g 429 (514)
. .....+.++... +.+ ++...++.++++.+.+ ++..+++.++++++.++|+++.. +...
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g---~~~~-- 377 (447)
T PRK00451 303 GKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGG---VELF-- 377 (447)
T ss_pred CCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCC---EEec--
Confidence 0 000011121111 221 1222233334443332 34577888888999998887621 2111
Q ss_pred eeeeE---EEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE----ee----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250 430 TGLIL---GTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----VS----GDNIMMSPPFIMSPEEVDELISKYGK 498 (514)
Q Consensus 430 ~g~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~----g~~iRi~p~~~~t~e~id~~~~~l~~ 498 (514)
.+.++ .+.+. . ....+.++|.++|+.+. +. .+.+|++++..+|++||+++++.|++
T Consensus 378 ~~~~~~~~~v~~~--~-----------~~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~ 444 (447)
T PRK00451 378 DGPFFNEFVVRLP--K-----------PAEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGE 444 (447)
T ss_pred CCCeEEEEEEecC--C-----------CHHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 12221 13321 0 13468889999987742 21 24799999888999999999999987
Q ss_pred HH
Q 010250 499 AL 500 (514)
Q Consensus 499 ~l 500 (514)
.+
T Consensus 445 ~~ 446 (447)
T PRK00451 445 VL 446 (447)
T ss_pred Hh
Confidence 54
No 276
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.56 E-value=2.9e-13 Score=139.47 Aligned_cols=238 Identities=15% Similarity=0.099 Sum_probs=147.1
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
.+...+|+++|+++++ .+.+++++||+.|+..++.... ..++.||+..+.|.+......... .
T Consensus 58 ~p~~~~le~~lA~l~g---~~~av~~~sG~~Ai~~~l~al~--------~~Gd~Vi~~~~~y~~t~~~~~~~~------~ 120 (391)
T TIGR01328 58 NPTVSNLEGRIAFLEG---TEAAVATSSGMGAIAATLLTIL--------KAGDHLISDECLYGCTFALLEHAL------T 120 (391)
T ss_pred CchHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEecCcchHHHHHHHHHH------h
Confidence 4556889999999973 4568999999999998886553 234678887776644321110000 0
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
.++. .+..++.. +.+++++.+. +++.+|++|.++++.|.+.+ +++|.++|+
T Consensus 121 ~~G~---~~~~vd~~------------------d~e~l~~~i~----~~tklV~le~p~Np~G~v~d----l~~I~~la~ 171 (391)
T TIGR01328 121 KFGI---QVDFINMA------------------IPEEVKAHIK----DNTKIVYFETPANPTMKLID----MERVCRDAH 171 (391)
T ss_pred cCCe---EEEEECCC------------------CHHHHHHhhc----cCCeEEEEECCCCCCCcccC----HHHHHHHHH
Confidence 0110 01111110 1356666553 35678889988888888876 999999999
Q ss_pred hcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCccc-ceeEEeCHHHHHHhhhccCCCCcccccCCCC
Q 010250 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMP-IGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~p-ig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~ 379 (514)
++|+++|+||++. .+..+.. .+...|++ +++|.++|.+.+ .|++++++++++.+.... . ....+..
T Consensus 172 ~~gi~livD~a~a-~~~~~~~-----~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~----~-~~~~g~~ 240 (391)
T TIGR01328 172 SQGVKVIVDNTFA-TPMLTNP-----VALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVG----I-KDMTGSV 240 (391)
T ss_pred HcCCEEEEECCCc-hhccCCc-----hhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHH----H-HhCCCCC
Confidence 9999999999986 3222221 22345766 466999873345 466778888887776311 0 1011234
Q ss_pred CcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-----CCcee----------EEEeeeeeEEEEEc
Q 010250 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----------EIRGTGLILGTEFA 439 (514)
Q Consensus 380 ~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----------~v~g~g~~~~i~~~ 439 (514)
.+|..++.++..|+.+.. ..++..++.+.+.+.|++... +|... ..++.|.++.|++.
T Consensus 241 l~~~~a~l~l~~L~tl~~--r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~ 313 (391)
T TIGR01328 241 ISPFDAWLILRGLKTLNI--RMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELK 313 (391)
T ss_pred CCcHHHHHHHhCcCcHHH--HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeC
Confidence 567777777776665432 356667777777777765421 22111 13466889999986
No 277
>PRK06460 hypothetical protein; Provisional
Probab=99.55 E-value=3.6e-13 Score=138.18 Aligned_cols=235 Identities=16% Similarity=0.152 Sum_probs=142.9
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccce---eeeecCCCc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTL---IAASLSGLP 218 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~---~~~~~s~~~ 218 (514)
..+...+|+++++++.+. +..+.++||++|+..++.... ..+++||+..+.|.+... ..+...|..
T Consensus 43 ~~p~~~~L~~~lA~l~g~---~~~v~~~sG~~ai~~~l~al~--------~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~ 111 (376)
T PRK06460 43 ANPTVLELTKKIVELENA---EMGVAFSSGMGAISTTALALL--------KPGNSVLVHRDMFGRSYRFFTDYLKNWGVN 111 (376)
T ss_pred CCccHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHHh--------CCCCEEEEecCCcCcHHHHHHHHHHhhCcE
Confidence 345578899999998742 345666889999988887553 234678877665533210 001111111
Q ss_pred cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250 219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 298 (514)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~ 298 (514)
+..++. .+ .+.+++++ .+++.+|++|.++++.|.+.+ +++|.
T Consensus 112 ------------v~~~~~----------~~--------~~~l~~~~----~~~tklV~l~sp~NPtG~v~d----~~~I~ 153 (376)
T PRK06460 112 ------------VDASNP----------GS--------DNIIEKAK----SKRYDVVFVENITNPLLRVVD----ITELS 153 (376)
T ss_pred ------------EEEECC----------CC--------HHHHHHhc----CCCceEEEEECCCCCCCcccC----HHHHH
Confidence 000100 00 12233332 245778889999999998887 78999
Q ss_pred HHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCC-cccceeEEeCHHHHHHhhhccCCCCccccc
Q 010250 299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSA-YMPIGAILVSPEVSEVIHSQSNTLGSFSHG 375 (514)
Q Consensus 299 ~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG-~~pig~v~~~~~i~~~l~~~~~~~~~~~~~ 375 (514)
++|++||+++|+||+|..+ ... .......|++ +++|.++|. ...+|++++++++++.+... ...
T Consensus 154 ~la~~~g~~vivDea~~~~-~~~-----~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~-------~~~ 220 (376)
T PRK06460 154 KVCKENGSILIVDATFSTP-INQ-----KPLELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQM-------RRT 220 (376)
T ss_pred HHHHHcCCEEEEECCcCcc-ccC-----ChhhcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHH-------HHh
Confidence 9999999999999998632 111 1111224665 578998752 14578888999988887632 111
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-----CCcee----------EEEeeeeeEEEEEcc
Q 010250 376 FTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----------EIRGTGLILGTEFAD 440 (514)
Q Consensus 376 ~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----------~v~g~g~~~~i~~~~ 440 (514)
.+.+.+|..+..++..++.++ ...+++.++++++.+.|++.+. +|... ...|.|.++.|++..
T Consensus 221 ~g~~~~~~~a~~~l~~~~~l~--~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~ 298 (376)
T PRK06460 221 LGTSLDPHAAYLTLRGIKTLK--IRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNG 298 (376)
T ss_pred cCCCCCHHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence 233355665555555565554 3466777788888887775421 22111 124678899999863
No 278
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.54 E-value=1.9e-13 Score=140.84 Aligned_cols=233 Identities=15% Similarity=0.128 Sum_probs=142.2
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCcc
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPA 219 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~~ 219 (514)
.+...+++++++++++ .+.+++++||++|+..++.... ..++.||+....|.+..... +...|..
T Consensus 60 ~p~~~~le~~la~l~g---~~~~v~~ssG~~Ai~~al~al~--------~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~- 127 (390)
T PRK08133 60 NPTVTMFQERLAALEG---AEACVATASGMAAILAVVMALL--------QAGDHVVSSRSLFGSTVSLFEKIFARFGIE- 127 (390)
T ss_pred ChHHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEccCcchhHHHHHHHHHHHcCcE-
Confidence 4557889999999873 3578999999999999987653 23457887766665432110 1011110
Q ss_pred ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHH
Q 010250 220 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA 299 (514)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~ 299 (514)
+..++.. +.+++++.+. +++++|++|.+++..|.+.+ +++|.+
T Consensus 128 -----------v~~vd~~------------------d~~~l~~~i~----~~tklV~ie~p~NptG~v~d----l~~I~~ 170 (390)
T PRK08133 128 -----------TTFVDLT------------------DLDAWRAAVR----PNTKLFFLETPSNPLTELAD----IAALAE 170 (390)
T ss_pred -----------EEEECCC------------------CHHHHHHhcC----cCCeEEEEECCCCCCCCcCC----HHHHHH
Confidence 1111110 1366666664 35678889888888898876 999999
Q ss_pred HHHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccc-eeEEeCHHHHHHhhhccCCCCcccccC
Q 010250 300 VVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPI-GAILVSPEVSEVIHSQSNTLGSFSHGF 376 (514)
Q Consensus 300 l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pi-g~v~~~~~i~~~l~~~~~~~~~~~~~~ 376 (514)
+|++||+++|+|+++... ..... .....|+++ ++|.++|.+.++ |++++++++++.+... ....
T Consensus 171 la~~~gi~livD~t~~~~-~~~~p-----l~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~-------~~~~ 237 (390)
T PRK08133 171 IAHAAGALLVVDNCFCTP-ALQQP-----LKLGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGF-------LRTA 237 (390)
T ss_pred HHHHcCCEEEEECCCccc-ccCCc-----hhhCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHH-------HHHh
Confidence 999999999999998521 11111 112347764 669998855677 4566777776655421 1112
Q ss_pred CCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEc
Q 010250 377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFA 439 (514)
Q Consensus 377 t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~ 439 (514)
....+|..+..++..++.+.. ..++..++...+.+.|++.. .+|... ...|.|.++.|++.
T Consensus 238 g~~~~~~~a~~~l~gl~tl~~--R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~ 313 (390)
T PRK08133 238 GPTLSPFNAWVFLKGLETLSL--RMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVK 313 (390)
T ss_pred CCCCCHHHHHHHHcccchHHH--HHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEc
Confidence 234556666666666554432 23444455666666665431 122211 13467889999985
No 279
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.54 E-value=4.6e-13 Score=137.50 Aligned_cols=238 Identities=17% Similarity=0.199 Sum_probs=149.7
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 221 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~ 221 (514)
+++...+|++.|+++.+ .+.+++++||++|+..++.... ..+++|++.++.|.+.........+.....
T Consensus 49 ~~p~~~~le~~lA~l~g---~~~v~~~~gg~~Ai~~~l~all--------~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~ 117 (382)
T TIGR02080 49 GNPTRDLLQQALAELEG---GAGAVVTNTGMSAIHLVTTALL--------GPDDLLVAPHDCYGGTYRLLNALAKKGCFR 117 (382)
T ss_pred CCchHHHHHHHHHHHhC---CCcEEEEcCHHHHHHHHHHHHc--------CCCCEEEEcCCCcHHHHHHHHHHHhhcCeE
Confidence 34557889999999874 3679999999999999987653 345789999999976421111100000000
Q ss_pred CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250 222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 301 (514)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~ 301 (514)
+..++.. +.+++++.+. +++++|++|..++.+|.+.+ +++|.++|
T Consensus 118 ---------v~~~d~~------------------d~~~l~~ai~----~~tklV~l~~p~NPtG~~~d----l~~I~~la 162 (382)
T TIGR02080 118 ---------VLFVDQG------------------DEQALRAALA----QKPKLVLIETPSNPLLRVVD----IAKICHLA 162 (382)
T ss_pred ---------EEEECCC------------------CHHHHHHhcC----cCceEEEEECCCCCCCEecC----HHHHHHHH
Confidence 0000000 1356666664 34678888888888888876 89999999
Q ss_pred HhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcC-CcccceeEEe-CHHHHHHhhhccCCCCcccccCC
Q 010250 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSS-AYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFT 377 (514)
Q Consensus 302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~g-G~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t 377 (514)
+++|+++|+||+|..+ ... .......|++ +++|.++| +....|++++ ++++.+.+... ....+
T Consensus 163 ~~~g~~vvvD~a~~~~-~~~-----~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~-------~~~~g 229 (382)
T TIGR02080 163 KAVGAVVVVDNTFLSP-ALQ-----NPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWW-------ANNLG 229 (382)
T ss_pred HHcCCEEEEECCCccc-ccC-----CchhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHH-------HHccC
Confidence 9999999999999622 111 1112235766 46798876 3245777766 56777666531 12224
Q ss_pred CCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEcc
Q 010250 378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD 440 (514)
Q Consensus 378 ~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~ 440 (514)
...+|+.+..++..++.+... .++..++...+.+.|+..+ .+|... ...|.|.++.|++.+
T Consensus 230 ~~~sp~~a~l~lr~l~tl~~R--~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 305 (382)
T TIGR02080 230 VTGGAFDSYLTLRGLRTLVAR--MRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKG 305 (382)
T ss_pred CCCCHHHHHHHHcccchHHHH--HHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecC
Confidence 457788888887777765432 4555566666666666431 122211 124678899999863
No 280
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.54 E-value=5e-13 Score=138.10 Aligned_cols=234 Identities=14% Similarity=0.126 Sum_probs=145.0
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
++...+|+++|+++.+ .+.+++++||+.|+..++.... ..+++||+....|.+ +...... ...
T Consensus 69 ~p~~~~le~~lA~l~g---~~~al~~~sG~~Ai~~~l~all--------~~Gd~Vl~~~~~~~~-t~~~~~~-----~~~ 131 (403)
T PRK07810 69 NPTVSMFEERLRLIEG---AEACFATASGMSAVFTALGALL--------GAGDRLVAARSLFGS-CFVVCNE-----ILP 131 (403)
T ss_pred CchHHHHHHHHHHHhC---CCcEEEECChHHHHHHHHHHHh--------CCCCEEEEccCCcch-HHHHHHH-----HHH
Confidence 4456899999999973 4589999999999999887653 334677776654433 2211100 000
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
.++. .+..++. .+.+++++.+. +++.+|++|.+.+..|.+.+ +++|.++|+
T Consensus 132 ~~G~---~v~~vd~------------------~d~~~l~~ai~----~~tklV~~esp~Nptg~v~d----l~~I~~la~ 182 (403)
T PRK07810 132 RWGV---ETVFVDG------------------EDLSQWEEALS----VPTQAVFFETPSNPMQSLVD----IAAVSELAH 182 (403)
T ss_pred HcCc---EEEEECC------------------CCHHHHHHhcC----cCceEEEEECCCCCCCeecC----HHHHHHHHH
Confidence 0010 0001110 01466777664 35678999988888898876 999999999
Q ss_pred hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccc-eeEEeCHHHHH-HhhhccCCCCcccccCCC
Q 010250 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPI-GAILVSPEVSE-VIHSQSNTLGSFSHGFTY 378 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pi-g~v~~~~~i~~-~l~~~~~~~~~~~~~~t~ 378 (514)
++|+++|+||++. .+..... . ....|+++ ++|.++|.+..+ |+++++++.+. .+.. +......
T Consensus 183 ~~g~~vivD~a~a-~~~~~~~--~---~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~-------~~~~~g~ 249 (403)
T PRK07810 183 AAGAKVVLDNVFA-TPLLQRG--L---PLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQK-------LMRHTGP 249 (403)
T ss_pred HcCCEEEEECCCC-ccccCCh--h---hcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHH-------HHHHhCC
Confidence 9999999999986 2222111 1 12357775 559998733565 66777777554 2331 1111223
Q ss_pred CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEE------------------EeeeeeEEEEEcc
Q 010250 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI------------------RGTGLILGTEFAD 440 (514)
Q Consensus 379 ~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v------------------~g~g~~~~i~~~~ 440 (514)
..+|..++.++..|+.+.. ..++..++...+.+.|++. |.+..| .|.|.++.+++..
T Consensus 250 ~~s~~~a~l~l~~L~tl~~--R~~~~~~~a~~~a~~L~~~---p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~ 324 (403)
T PRK07810 250 ALSAFNAWVLLKGLETLAL--RVRHSNASALRIAEFLEGH---PAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDA 324 (403)
T ss_pred CCCHHHHHHHHhccCcHHH--HHHHHHHHHHHHHHHHhcC---CCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence 4678888888888876643 3455556666666666543 222222 2678899999864
No 281
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.54 E-value=1.2e-12 Score=133.78 Aligned_cols=229 Identities=16% Similarity=0.141 Sum_probs=142.5
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee---ecCCCc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA---SLSGLP 218 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~---~~s~~~ 218 (514)
+.+...+|+++|+++. + +.+++++||++|+..++.... ..+++||+.+++|++...... ...|..
T Consensus 49 ~~p~~~~Le~~lA~l~---~-~~~v~~~sG~~Ai~~~l~all--------~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~ 116 (366)
T PRK07582 49 SNPTWRALEAALGELE---G-AEALVFPSGMAAITAVLRALL--------RPGDTVVVPADGYYQVRALAREYLAPLGVT 116 (366)
T ss_pred CCccHHHHHHHHHHHc---C-CCEEEECCHHHHHHHHHHHhc--------CCCCEEEEeCCCcHhHHHHHHHHHhcCeEE
Confidence 4455788999999986 2 467788999999998886543 334789999999987643211 101111
Q ss_pred cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250 219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 298 (514)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~ 298 (514)
. ..++.. ++.+. +. +++..|++|..++.+|.+.+ +++|.
T Consensus 117 v------------~~v~~~--------------------~~~~~-~~----~~t~lV~le~p~NPtg~v~d----i~~I~ 155 (366)
T PRK07582 117 V------------REAPTA--------------------GMAEA-AL----AGADLVLAETPSNPGLDVCD----LAALA 155 (366)
T ss_pred E------------EEECCC--------------------ChHHH-hc----cCceEEEEECCCCCCCCccC----HHHHH
Confidence 0 111110 00011 11 35677888888888887766 99999
Q ss_pred HHHHhcCCEEEEechhc-CcccccccceecccCCCCchhc--hhhhhcC-CcccceeEEe-CHHHHHHhhhccCCCCccc
Q 010250 299 AVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVS--FAKALSS-AYMPIGAILV-SPEVSEVIHSQSNTLGSFS 373 (514)
Q Consensus 299 ~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~--~sK~l~g-G~~pig~v~~-~~~i~~~l~~~~~~~~~~~ 373 (514)
++|+++|+++|+||+|. .+|. .......|+++ ++|.|+| +...+|++++ ++++.+.+... .
T Consensus 156 ~~a~~~g~~lvVD~t~~~~~~~-------~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~-------~ 221 (366)
T PRK07582 156 AAAHAAGALLVVDNTTATPLGQ-------RPLELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERW-------R 221 (366)
T ss_pred HHHHHcCCEEEEECCCCCcccc-------CchhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHH-------H
Confidence 99999999999999985 2221 11123457764 6799977 3367888887 47777766531 1
Q ss_pred ccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-----CCceeE----------EEeeeeeEEEEE
Q 010250 374 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIGE----------IRGTGLILGTEF 438 (514)
Q Consensus 374 ~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~~----------v~g~g~~~~i~~ 438 (514)
.......+|+.+..+...|+.+. -..++..+++..+.+.|++... +|.... ..|.|.++.|++
T Consensus 222 ~~~g~~~~~~~a~l~~r~l~tl~--~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~ 299 (366)
T PRK07582 222 LLAGAIPGPFEAWLAHRSLGTLG--LRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFEL 299 (366)
T ss_pred HHhCCCCCHHHHHHHHhccccHH--HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEe
Confidence 11123446777777766666443 2346666777778877776421 222111 125788999998
Q ss_pred c
Q 010250 439 A 439 (514)
Q Consensus 439 ~ 439 (514)
.
T Consensus 300 ~ 300 (366)
T PRK07582 300 A 300 (366)
T ss_pred C
Confidence 5
No 282
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.54 E-value=5.4e-12 Score=123.38 Aligned_cols=291 Identities=15% Similarity=0.142 Sum_probs=172.1
Q ss_pred CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcc
Q 010250 161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW 240 (514)
Q Consensus 161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
+++++..+++++.|+++.+-+.. ...+-+++..+.|.|......--+|.... | .+....+.|
T Consensus 145 dP~~~Vv~~G~T~ane~l~fcLa--------dpgdafLvPtPyY~gfdrdl~~rTgveiv--------p--v~c~Ss~~f 206 (471)
T KOG0256|consen 145 DPERVVVTNGATSANETLMFCLA--------DPGDAFLVPTPYYPGFDRDLRWRTGVEIV--------P--VHCSSSNGF 206 (471)
T ss_pred CccceEEecccchhhHHHHHHhc--------CCCceeeecCCCCCcccccceeccCceEE--------E--EEeecCCCc
Confidence 56789999999999998776553 34577899999998875444333332211 0 111111111
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 318 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g 318 (514)
+- ..+.||..+.+. ...++.++|+-..+++-|++. +++.|..+...+.++++.+|+|||++|=-
T Consensus 207 ~i-------------tv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~-~~e~L~~ll~Fa~~kniHvI~DEIya~sV 272 (471)
T KOG0256|consen 207 QI-------------TVEALEAALNQARKLGLKVKGVLITNPSNPLGTTL-SPEELISLLNFASRKNIHVISDEIYAGSV 272 (471)
T ss_pred cc-------------cHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCcc-CHHHHHHHHHHHhhcceEEEeehhhcccc
Confidence 11 135566554432 224565555544444555554 56889999999999999999999998542
Q ss_pred cccccce-e-cc---cCCCCchh----chhhhhcCCcccceeEEe-CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHH
Q 010250 319 RLGTMFG-C-DK---YSIKPDLV----SFAKALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVA 388 (514)
Q Consensus 319 r~G~~~~-~-~~---~gv~pDiv----~~sK~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa 388 (514)
.....|- + +. ....||.+ .+||-||-.++++|++.. ++.+.....+-+ . -...++..+--.
T Consensus 273 F~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kms----s-----f~~vSs~tQ~~l 343 (471)
T KOG0256|consen 273 FDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMS----S-----FGLVSSQTQYLL 343 (471)
T ss_pred cCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHh----h-----ccCCcHHHHHHH
Confidence 1111221 1 11 11245643 689966654499999998 456666665311 1 112233333322
Q ss_pred HHHH--HHHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH
Q 010250 389 IEAL--KIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE 463 (514)
Q Consensus 389 ~aal--~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 463 (514)
..-| +.+.+ .+-..+++.+.+++.++|+++ ++|. --.+.|+++++++..--.+.. +.. --.+++.+.
T Consensus 344 a~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~c--l~s~AGlF~wvDlr~lL~s~t-fe~----El~Lw~~i~ 415 (471)
T KOG0256|consen 344 ASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPC--LKSNAGLFCWVDLRKLLTSLT-FEG----ELELWERIL 415 (471)
T ss_pred HHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCce--eecCCeeEEEEEhHHhcCcCC-hHH----HHHHHHHHH
Confidence 2222 11111 122456777778888888887 3343 446789999999875332211 211 223556666
Q ss_pred HC-CcEEEeeC-------CEEEEeCCCCC-CHHHHHHHHHHHHHHHHH
Q 010250 464 KH-GMLVRVSG-------DNIMMSPPFIM-SPEEVDELISKYGKALKA 502 (514)
Q Consensus 464 ~~-Gv~~~~~g-------~~iRi~p~~~~-t~e~id~~~~~l~~~l~~ 502 (514)
++ ++.++|+. +++|++ +.. .++.++-++++|...+..
T Consensus 416 ~~vklnlSpG~s~~C~EpGWFRvc--FAn~~~~t~~~am~Ri~~~~~~ 461 (471)
T KOG0256|consen 416 DNVKLNLSPGSSCHCHEPGWFRVC--FANMSEETLEVAMRRLKQFLDS 461 (471)
T ss_pred HhhccccCCCCcceecCCCeEEEE--eccCCHHHHHHHHHHHHHHHHh
Confidence 66 88888763 689999 554 445555599999998874
No 283
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.54 E-value=1.3e-12 Score=143.17 Aligned_cols=314 Identities=12% Similarity=0.110 Sum_probs=186.1
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeC-ChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTN-SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPAL 220 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~-sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~ 220 (514)
+.....+|.+.|++++ +++.+.+.. ||+.+..+++...+.|+..+|.++|++||+. .+-||+........|...
T Consensus 541 ~lq~i~elq~~l~eLt---Gmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp-~saHgtNpasa~~~GieV- 615 (954)
T PRK12566 541 YRAMIDELEAWLCAIT---GFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIP-SSAHGTNPASAQMAGMRV- 615 (954)
T ss_pred HHHHHHHHHHHHHHHH---CCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEec-ccccccCHHHHHHCCCEE-
Confidence 4455668888999987 677777765 8999998999999999998888777666654 477766543332222211
Q ss_pred cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHH
Q 010250 221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV 300 (514)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l 300 (514)
..+++.. -+..++++|++++.+.. +++++|++.-.+..| .+..+ +++|.++
T Consensus 616 -----------v~Vp~D~-------------~G~iDle~L~a~I~~~~-~~laaVmiT~Pnt~G-v~e~~---V~eI~~i 666 (954)
T PRK12566 616 -----------VIVECDP-------------DGNVDLDDLKAKAAAAG-DRLSCLMITYPSTHG-VYEEG---IREICEV 666 (954)
T ss_pred -----------EEeccCC-------------CCCcCHHHHHHHhhccC-CCEEEEEEEecCcCc-eecch---HHHHHHH
Confidence 1122210 11233688888886433 567777776554444 44333 9999999
Q ss_pred HHhcCCEEEEechhcCcccccccceec-ccCCCCchhchh--hhhc----CCcccceeEEeCHHHHHHhhhccC--CCCc
Q 010250 301 VKKYDILFIADEVICAFGRLGTMFGCD-KYSIKPDLVSFA--KALS----SAYMPIGAILVSPEVSEVIHSQSN--TLGS 371 (514)
Q Consensus 301 ~~~~gillI~DEv~tG~gr~G~~~~~~-~~gv~pDiv~~s--K~l~----gG~~pig~v~~~~~i~~~l~~~~~--~~~~ 371 (514)
|+++|+++++|-++. .+-. ... .-.+..|+++++ |.|+ +|+..+|.+.+++.+...+..... ..+.
T Consensus 667 ah~~Galv~vDgA~~-~a~~----~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~ 741 (954)
T PRK12566 667 VHQHGGQVYMDGANL-NAQV----GLARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGP 741 (954)
T ss_pred HHHcCCEEEEEeeCh-hhcc----CCCChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCC
Confidence 999999999999986 2211 111 123446888765 8664 454446776777766655543210 0010
Q ss_pred c-ccc---CCCCCcHHHHHHHHHHHHHHhhccHHH---HHHHHHHHHHhhhhhccCCCceeEEEeeee-e--EEEEEccC
Q 010250 372 F-SHG---FTYSGHPVSCAVAIEALKIYKERNIVE---QVNKIAPKFQDGVKAFSDSPIIGEIRGTGL-I--LGTEFADN 441 (514)
Q Consensus 372 ~-~~~---~t~~~~pl~~aaa~aal~~~~~~~~~~---~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~-~--~~i~~~~~ 441 (514)
. ..+ ....++.+.+.++..-+..+-.+ +.+ ....+..+++++|.+.....+ .. ..+. + +.+.+..-
T Consensus 742 ~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~~-~~--~~~~~~hEfii~~~~l 817 (954)
T PRK12566 742 DPNNGAVSAAPWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVLY-RG--RNERVAHECILDLRPL 817 (954)
T ss_pred CCCCCceeecccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCCc-CC--CCCCeeeEEEEEcccc
Confidence 0 111 12233333344444444544433 322 224577888888866322122 10 0111 1 12232211
Q ss_pred CCCCCCCCCccchHHHHHHHHHHCCcEEE----eeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 442 KSPNEPFPPEWGIGAYFGAQCEKHGMLVR----VSGDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
+.. ... ....+.++|.+.|+... |..+.+|++|....|++|||+++++|+...+++.
T Consensus 818 ~~~-----~g~-~~~dvakRL~d~Gihapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~ 878 (954)
T PRK12566 818 KAQ-----TGI-SEEDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEIG 878 (954)
T ss_pred ccc-----cCC-CHHHHHHHHHHCCcEEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 100 000 13558888999998765 3456799999999999999999999988887655
No 284
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.53 E-value=6.4e-13 Score=136.55 Aligned_cols=238 Identities=17% Similarity=0.168 Sum_probs=147.0
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 221 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~ 221 (514)
+.+...+|+++|+++.+ .+.+++++||++|+..++.... ..+++|++.++.|++...........
T Consensus 50 ~~pt~~~L~~~lA~l~g---~~~~i~~~sg~~Ai~~~l~~l~--------~~GD~Vl~~~~~y~~~~~~~~~~~~~---- 114 (386)
T PRK08045 50 GNPTRDVVQRALAELEG---GAGAVLTNTGMSAIHLVTTVFL--------KPGDLLVAPHDCYGGSYRLFDSLAKR---- 114 (386)
T ss_pred CCccHHHHHHHHHHHhC---CCeEEEECCHHHHHHHHHHHHc--------CCCCEEEEcCCCcHHHHHHHHHHHhh----
Confidence 34556789999999874 3479999999999999987553 34568999999997632111111000
Q ss_pred CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250 222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 301 (514)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~ 301 (514)
.+. .+..++. .+.+++++.+. +++.+|++|..++..|.+.+ +++|.++|
T Consensus 115 --~gi---~v~~vd~------------------~d~e~l~~~l~----~~tklV~l~sP~NPtG~v~d----i~~I~~ia 163 (386)
T PRK08045 115 --GCY---RVLFVDQ------------------GDEQALRAALA----EKPKLVLVESPSNPLLRVVD----IAKICHLA 163 (386)
T ss_pred --CCe---EEEEeCC------------------CCHHHHHHhcc----cCCeEEEEECCCCCCCEecC----HHHHHHHH
Confidence 000 0000000 01356666653 35678888888888888876 89999999
Q ss_pred HhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCC-cccceeEEe-CHHHHHHhhhccCCCCcccccCC
Q 010250 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSA-YMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFT 377 (514)
Q Consensus 302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG-~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t 377 (514)
+++|+++|+||+|... .. ........|++ +++|.++|. ....|++++ ++++.+.+... ....+
T Consensus 164 ~~~g~~vivDeay~~~-~~-----~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~-------~~~~g 230 (386)
T PRK08045 164 REAGAVSVVDNTFLSP-AL-----QNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWW-------ANNIG 230 (386)
T ss_pred HHcCCEEEEECCCCcc-cc-----CCchhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHH-------HHhcC
Confidence 9999999999998633 11 11122334776 467988862 134677766 56776665421 11223
Q ss_pred CCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEcc
Q 010250 378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD 440 (514)
Q Consensus 378 ~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~ 440 (514)
...+|+.+..++..|+.+.. ..++..++...+.+.|++.+ .+|... ...|.|.++.|++.+
T Consensus 231 ~~~~p~~~~l~~rgl~tl~~--R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~ 306 (386)
T PRK08045 231 VTGGAFDSYLLLRGLRTLVP--RMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG 306 (386)
T ss_pred CCCCHHHHHHHHhhhccHHH--HHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecC
Confidence 44678888877777775532 24555555666666665431 122111 124678899999863
No 285
>PRK05968 hypothetical protein; Provisional
Probab=99.53 E-value=1.4e-12 Score=134.48 Aligned_cols=230 Identities=14% Similarity=0.089 Sum_probs=141.1
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccce-e--eeecCCCcc
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTL-I--AASLSGLPA 219 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~-~--~~~~s~~~~ 219 (514)
.+...+|+++++++++ .+..++++||+.|+..++.... ..+++||+....|++... . .+...|...
T Consensus 62 ~p~~~~le~~lA~l~g---~~~av~~~sG~~Ai~~al~al~--------~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v 130 (389)
T PRK05968 62 NPTVRAFEEMLAKLEG---AEDARGFASGMAAISSTVLSFV--------EPGDRIVAVRHVYPDAFRLFETILKRMGVEV 130 (389)
T ss_pred ChhHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEeCCCchHHHHHHHHHHHHcCceE
Confidence 3446789999999873 3467778999999998886543 234688898888876421 0 011111100
Q ss_pred ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHH
Q 010250 220 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA 299 (514)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~ 299 (514)
..++.. +.+++++.+. ++.+|++|.+.+..+.+.+ +++|.+
T Consensus 131 ------------~~vd~~------------------d~~~l~~~i~-----~tklV~ie~pt~~~~~~~d----l~~i~~ 171 (389)
T PRK05968 131 ------------DYVDGR------------------DEEAVAKALP-----GAKLLYLESPTSWVFELQD----VAALAA 171 (389)
T ss_pred ------------EEeCCC------------------CHHHHHHhcc-----cCCEEEEECCCCCCCcHHH----HHHHHH
Confidence 001100 1356666541 3457888876666555544 999999
Q ss_pred HHHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcC-CcccceeEEeCHHHHHHhhhccCCCCcccccC
Q 010250 300 VVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSS-AYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF 376 (514)
Q Consensus 300 l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~g-G~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~ 376 (514)
+|++||+++|+|+++... ..... . .+| .|+++ ++|.++| |....|++++++++++.+..... . ..+
T Consensus 172 la~~~gi~vivD~a~a~~-~~~~p--~-~~g--~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~---~-~~g- 240 (389)
T PRK05968 172 LAKRHGVVTMIDNSWASP-VFQRP--I-TLG--VDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAY---P-YLG- 240 (389)
T ss_pred HHHHcCCEEEEECCCcch-hccCc--h-hcC--CcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHH---H-hCC-
Confidence 999999999999998632 21111 1 123 47664 5699987 32345777788888877753110 0 112
Q ss_pred CCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEE-------------EeeeeeEEEEEc
Q 010250 377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI-------------RGTGLILGTEFA 439 (514)
Q Consensus 377 t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v-------------~g~g~~~~i~~~ 439 (514)
...+|..++.++..|+.+. ...++..++.+.+.+.|++. |.+..+ .|.|.++.|++.
T Consensus 241 -~~~~~~~A~~~l~~L~tl~--~r~~~~~~~a~~la~~L~~~---p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~ 310 (389)
T PRK05968 241 -AKLSPFEAWLLLRGLRTLP--LRMKAHEASALEIARRLKAH---PVVERVCHPALANHPPAGLSGTSGLFSFIFR 310 (389)
T ss_pred -CCCChHHHHHHHcccCcHH--HHHHHHHHHHHHHHHHHHhC---CCccEEECCCCCCChHHhCCCCceEEEEEEC
Confidence 2346777777777777552 33455556677777777765 322222 255778888886
No 286
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.53 E-value=2.7e-13 Score=138.71 Aligned_cols=236 Identities=11% Similarity=0.100 Sum_probs=146.5
Q ss_pred chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCC
Q 010250 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK 223 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~ 223 (514)
+....|+++|+++.+ .+.+++++||++|+..++.... ..+++||+.++.|++......... ..
T Consensus 50 Pt~~~lE~~lA~l~g---~~~~~~~~sG~~Ai~~al~all--------~~GD~Vl~~~~~y~~t~~~~~~~~------~~ 112 (377)
T TIGR01324 50 LTHFALQDAMCELEG---GAGCYLYPSGLAAVTNSILAFV--------KAGDHVLMVDSAYEPTRYFCDIVL------KR 112 (377)
T ss_pred ccHHHHHHHHHHHhC---CCcEEEECcHHHHHHHHHHHhc--------CCCCEEEEcCCCcHHHHHHHHHHH------Hh
Confidence 456789999999863 4689999999999999997653 335688888999987532110000 00
Q ss_pred CCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh
Q 010250 224 FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK 303 (514)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~ 303 (514)
++.. +..++. . + .+++++.+. +++.+|++|.+.+..|.+.+ +++|.++|++
T Consensus 113 ~gi~---v~~~d~----------~--~------~e~l~~~i~----~~tklV~lesp~Np~g~~~d----l~~I~~la~~ 163 (377)
T TIGR01324 113 MGVD---ITYYDP----------L--I------GEDIATLIQ----PNTKVLFLEAPSSITFEIQD----IPAIAKAARN 163 (377)
T ss_pred cCcE---EEEECC----------C--C------HHHHHHhcC----CCceEEEEECCCCCCCcHHH----HHHHHHHHHH
Confidence 1100 000000 0 0 145665553 45779999988888888876 9999999999
Q ss_pred cCCEEEEechhcCcccccccceecccCCCCchhch--hhhhcCC-cccceeEEeCHHHHHHhhhccCCCCcccccCCCCC
Q 010250 304 YDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSA-YMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSG 380 (514)
Q Consensus 304 ~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~--sK~l~gG-~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~ 380 (514)
||+++|+|++|+ .|..... .....|+++. +|.++|. ..-.|+++++++.++.+... ........
T Consensus 164 ~g~~livD~t~a-~g~~~~p-----l~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~-------~~~~G~~l 230 (377)
T TIGR01324 164 PGIVIMIDNTWA-AGLLFKP-----LEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREH-------SYLMGQMV 230 (377)
T ss_pred cCCEEEEECCCc-cccccCc-----cccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHH-------HHHhCCCC
Confidence 999999999997 4433322 2234687754 6999872 13457788888877766521 11123344
Q ss_pred cHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEcc
Q 010250 381 HPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD 440 (514)
Q Consensus 381 ~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~ 440 (514)
+|..+...+..++.+.. ..++..+++..+.+.|++.. .+|... ...+.|.++.|++.+
T Consensus 231 ~p~~a~~~~rgl~tl~~--R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~ 303 (377)
T TIGR01324 231 DADDAYTTLRGLRTLGV--RLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQR 303 (377)
T ss_pred CHHHHHHHHhhhhhHHH--HHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECC
Confidence 67777666666665432 24555555555555555421 122211 123668899999863
No 287
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.53 E-value=4.8e-13 Score=136.54 Aligned_cols=317 Identities=14% Similarity=0.120 Sum_probs=183.4
Q ss_pred CHHHHHHHHHHHhc-CCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEe-CChhHHHHHHHHHHHHHHhhcCCCCcc
Q 010250 118 EPRLVAAATAQLNT-LPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFT-NSGSEANDTQVKLVWYYNNALGRPNKK 195 (514)
Q Consensus 118 ~p~v~~A~~~~l~~-~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~-~sGseA~~~Alk~a~~~~~~~~~~~~~ 195 (514)
+|+|++|+..+... +...|+. ....+...+..+.+++++...+..+|+|+ +|||.+++.++.... .+
T Consensus 15 ~~~v~~a~~~~~~~~~~~~hr~-~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~--------~~-- 83 (361)
T TIGR01366 15 RLEQLQALTTTAASLFGTSHRQ-APVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLI--------EK-- 83 (361)
T ss_pred CHHHHHHHHhcCccccccCcCC-hHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcc--------cc--
Confidence 78899887754211 1111211 11235566778888888853333468875 779999999996542 11
Q ss_pred EEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEE
Q 010250 196 KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAF 275 (514)
Q Consensus 196 ~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aav 275 (514)
+.+....+.+|......+... +- . . .+..++++. + ..++..+ .+++..|
T Consensus 84 ~~l~i~~G~~~~~~~~~a~~~-~~-~---~----~~~~~~~~~-------~-----------~~~~~~~----~~~~~lV 132 (361)
T TIGR01366 84 KSLHLSFGEFSSKFAKAVKLA-PW-L---G----EPIIVTADP-------G-----------SAPEPQA----DPGVDVI 132 (361)
T ss_pred cccEEecCHHHHHHHHHHHhh-hc-c---C----CceEEecCC-------C-----------CCCCCcc----CCCCCEE
Confidence 333344455554322221110 00 0 0 011111110 0 0111111 2467788
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeEE
Q 010250 276 IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAIL 353 (514)
Q Consensus 276 ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~ 353 (514)
.+-...+.+|++.| +++| ++++|+++|+|-+|+ +|-. ...++ . .|++++| |++++. -.++.++
T Consensus 133 ~~~h~et~tG~~~p----i~~I---~~~~g~~~iVDavqs-~g~~--~idv~--~--~D~~~~s~~K~lg~~-~Gl~~~~ 197 (361)
T TIGR01366 133 AWAHNETSTGVAVP----VRRP---EGSDDALVVIDATSG-AGGL--PVDIA--E--TDVYYFAPQKNFASD-GGLWLAI 197 (361)
T ss_pred EEcccCCccceecc----cccc---cccCCCeEEEEcCcc-ccCC--CCCHH--H--CCEEEEEchhhcCCC-CceEEEE
Confidence 88888888899988 5555 689999999999998 5322 12222 2 5888776 988763 2356667
Q ss_pred eCHHHHHHhhhccCCCC---cc----------cccCCCCCcHHH-HHHHHHHHHHHhhc-c---HHHHHHHHHHHHHhhh
Q 010250 354 VSPEVSEVIHSQSNTLG---SF----------SHGFTYSGHPVS-CAVAIEALKIYKER-N---IVEQVNKIAPKFQDGV 415 (514)
Q Consensus 354 ~~~~i~~~l~~~~~~~~---~~----------~~~~t~~~~pl~-~aaa~aal~~~~~~-~---~~~~~~~~~~~l~~~L 415 (514)
+++++++.+.+...... .+ ..+.|++..++. +.+..++++.+++. + ..++.+++.+++++.|
T Consensus 198 ~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l 277 (361)
T TIGR01366 198 MSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWA 277 (361)
T ss_pred ECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 79988877653211000 00 012344444444 33556788877654 2 4577888888899888
Q ss_pred hhccCC-CceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCCCHHH
Q 010250 416 KAFSDS-PIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSPEE 488 (514)
Q Consensus 416 ~~l~~~-~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~t~e~ 488 (514)
+++... ++..... .......+.|.+.. ....+...|.++||.+.+. ++.+|++....+|++|
T Consensus 278 ~~~~~~~~~~~~~~~~s~~v~~v~~~~g~-----------~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~d 346 (361)
T TIGR01366 278 QERPYATPFVTDPGKRSQVVGTIDFVDDI-----------DAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDD 346 (361)
T ss_pred HhCCCcccCCCChhhcccceEEEECCCcc-----------CHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHH
Confidence 877321 1211110 01112233342211 1445778888999998653 3469999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 010250 489 VDELISKYGKALKA 502 (514)
Q Consensus 489 id~~~~~l~~~l~~ 502 (514)
|+++++.|++++++
T Consensus 347 i~~l~~al~~~~~~ 360 (361)
T TIGR01366 347 VEALTECVDWVVER 360 (361)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998765
No 288
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.52 E-value=1.7e-12 Score=134.13 Aligned_cols=237 Identities=16% Similarity=0.161 Sum_probs=144.7
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
.+...+|+++|+++.+. +..++++||++|+..++.... ..+++|++..+.|++......... .
T Consensus 59 ~p~~~~Le~~lA~l~g~---~~~v~~~sG~~Ai~~~l~all--------~pGD~Vvv~~p~Y~~t~~~~~~~~------~ 121 (405)
T PRK08776 59 NPTRDLLGEALAELEGG---AGGVITATGMGAINLVLNALL--------QPGDTLVVPHDAYGGSWRLFNALA------K 121 (405)
T ss_pred ChHHHHHHHHHHHHhCC---CceEEEcCHHHHHHHHHHHHh--------CCCCEEEEccCCchHHHHHHHHHH------H
Confidence 44457899999998642 456788889999988887653 234678998999976321100000 0
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
.++ ..+..++.. +.+++++.+. +++.+|++|..++..|.+.+ +++|.++|+
T Consensus 122 ~~g---~~v~~v~~~------------------d~~~l~~~i~----~~tklV~l~~P~NPtG~v~d----l~~I~~la~ 172 (405)
T PRK08776 122 KGH---FALITADLT------------------DPRSLADALA----QSPKLVLIETPSNPLLRITD----LRFVIEAAH 172 (405)
T ss_pred hcC---cEEEEECCC------------------CHHHHHHhcC----cCCeEEEEECCCCCCCccCC----HHHHHHHHH
Confidence 001 000111110 1356666553 34667777777777888765 999999999
Q ss_pred hcCCEEEEechhcCcccccccceecccCCCCchhch--hhhhcCC-cccceeEEe-CHHHHHHhhhccCCCCcccccCCC
Q 010250 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSA-YMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTY 378 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~--sK~l~gG-~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~ 378 (514)
+||+++|+||+|..-... .. . ....|++++ +|.++|. ....|++++ ++++.+.+... .....+
T Consensus 173 ~~gi~vIvD~a~a~~~~~-~p--l---~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~-------~~~~g~ 239 (405)
T PRK08776 173 KVGALTVVDNTFLSPALQ-KP--L---EFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWW-------ANALGL 239 (405)
T ss_pred HcCCEEEEECCCcccccC-Cc--c---cccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHH-------HHhcCC
Confidence 999999999998632111 11 1 123577754 5988863 244666666 56776666431 111223
Q ss_pred CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEcc
Q 010250 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD 440 (514)
Q Consensus 379 ~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~ 440 (514)
..+|+.+...+..++.++. ..++..++...+.+.|++.+ .+|... ...|.|.++.|++..
T Consensus 240 ~~s~~~a~l~~~gl~tl~~--r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 314 (405)
T PRK08776 240 TGSPFDAFLTLRGLRTLDA--RLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEG 314 (405)
T ss_pred CCCHHHHHHHHhhhCcHHH--HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcC
Confidence 4689988888877776642 45666667777777766531 122111 124678899999863
No 289
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.52 E-value=3.9e-13 Score=138.89 Aligned_cols=237 Identities=13% Similarity=0.102 Sum_probs=146.9
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
.+...+|+++|++++ +.+.++.++||+.|+..++.... ..+++||+.+..|.+......... .
T Consensus 64 ~p~~~~Le~~lA~l~---G~~~~~~~~sG~~Ai~~~l~~~l--------~~Gd~Vl~~~~~y~~~~~~~~~~~------~ 126 (398)
T PRK07504 64 NPTVDMFEKRMCALE---GAEDARATASGMAAVTAAILCQV--------KAGDHVVAARALFGSCRYVVETLL------P 126 (398)
T ss_pred CchHHHHHHHHHHHh---CCCeeeEecCHHHHHHHHHHHHh--------CCCCEEEEcCCchhHHHHHHHHHH------h
Confidence 455688999999987 34566778999999987776443 234688888888866432111000 0
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
.++.. +..++. .+.+++++.+. +++.+|++|.+++..|.+.+ +++|.++|+
T Consensus 127 ~~G~~---v~~vd~------------------~d~e~l~~ai~----~~tklV~lesp~NptG~v~d----l~~I~~la~ 177 (398)
T PRK07504 127 RYGIE---STLVDG------------------LDLDNWEKAVR----PNTKVFFLESPTNPTLEVID----IAAVAKIAN 177 (398)
T ss_pred hcCeE---EEEECC------------------CCHHHHHHhcC----cCceEEEEECCCCCCcEecC----HHHHHHHHH
Confidence 01100 000110 11466666654 35778888888888888887 999999999
Q ss_pred hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccce-eEEeCHHHHHH-hhhccCCCCcccccCCC
Q 010250 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIG-AILVSPEVSEV-IHSQSNTLGSFSHGFTY 378 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig-~v~~~~~i~~~-l~~~~~~~~~~~~~~t~ 378 (514)
++|+++|+||+|+.. ..... .....|+++ ++|.++|.+.++| +++++++.+.. +... ......
T Consensus 178 ~~gi~lvvD~a~a~~-~~~~~-----~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~-------~~~~g~ 244 (398)
T PRK07504 178 QAGAKLVVDNVFATP-LFQKP-----LELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDY-------FRHTGP 244 (398)
T ss_pred HcCCEEEEECCcccc-ccCCc-----hhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHH-------HHHhCC
Confidence 999999999999721 21111 122357765 5699987447786 55666665542 3210 111123
Q ss_pred CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEcc
Q 010250 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD 440 (514)
Q Consensus 379 ~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~ 440 (514)
..+|..++.++..|+.+.. ..++..++...+.+.|++.. .+|... ..+|.|.|+.|++.+
T Consensus 245 ~~s~~~A~~~l~~L~tl~~--R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 319 (398)
T PRK07504 245 SLSPFNAWTLLKGLETLPV--RVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKG 319 (398)
T ss_pred CCCHHHHHHHHhccchHHH--HHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCC
Confidence 4678888888888887643 34555566677777666531 122211 124668899999953
No 290
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.52 E-value=9.9e-12 Score=128.12 Aligned_cols=316 Identities=16% Similarity=0.134 Sum_probs=181.1
Q ss_pred HHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEE
Q 010250 119 PRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 198 (514)
Q Consensus 119 p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii 198 (514)
++-.+++.+.+....+. ..+...++++.++++++ .++.++++||++|+..+++... . ..+++||
T Consensus 10 ~~~~~~v~~~~~~~~~~------~g~~~~~le~~la~~~g---~~~~v~~~sgt~al~~~l~al~------~-~~Gd~Vi 73 (380)
T TIGR03588 10 QDDIDAVVEVLKSDFLT------QGPTVPAFEEALAEYVG---AKYAVAFNSATSALHIACLALG------V-GPGDRVW 73 (380)
T ss_pred HHHHHHHHHHHhcCCcc------CChhHHHHHHHHHHHHC---CCeEEEEcCHHHHHHHHHHHcC------C-CCCCEEE
Confidence 45577788877654221 12345789999999883 3567788899999999997651 1 2346799
Q ss_pred EEecCCcccceeeeecCCCccccCCCCCCCCcccccCC-CCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEE
Q 010250 199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC-PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIA 277 (514)
Q Consensus 199 ~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aaviv 277 (514)
+....|++........+..+.+ ++. +.. ...+.+++++.+.+...+++.+|++
T Consensus 74 v~~~~~~~~~~~~~~~G~~~~~-------------~~~~~~~-------------~~~d~~~l~~~i~~~~~~~t~~v~~ 127 (380)
T TIGR03588 74 TTPITFVATANCALYCGAKVDF-------------VDIDPDT-------------GNIDEDALEKKLAAAKGKLPKAIVP 127 (380)
T ss_pred eCCcchHHHHHHHHHcCCEEEE-------------EecCCCc-------------CCcCHHHHHHHhhcccCCCceEEEE
Confidence 9888887653221111111110 111 000 0122577777775321123455553
Q ss_pred ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCC--CCchhchh----hhhcCCccccee
Q 010250 278 EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI--KPDLVSFA----KALSSAYMPIGA 351 (514)
Q Consensus 278 Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv--~pDiv~~s----K~l~gG~~pig~ 351 (514)
++ ..|...+ +++|.++|++||+++|.|++|+ +|-. +.....|. .-|+.++| |.++.| ..|+
T Consensus 128 --~~-~~G~~~~----~~~i~~l~~~~~~~lI~D~a~a-~g~~---~~~~~~g~~~~~d~~~~S~~~~K~~~~~--~GG~ 194 (380)
T TIGR03588 128 --VD-FAGKSVD----MQAIAALAKKHGLKIIEDASHA-LGAE---YGGKPVGNCRYADATVFSFHPVKIITTA--EGGA 194 (380)
T ss_pred --eC-CCCccCC----HHHHHHHHHHcCCEEEEECCCc-ccCc---cCCEeCCCccccceEEEecCCCCccccc--CceE
Confidence 22 2465555 8999999999999999999998 4321 11122232 33877765 777654 3455
Q ss_pred EEe-CHHHHHHhhhc---cCCCC---------------cccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 010250 352 ILV-SPEVSEVIHSQ---SNTLG---------------SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQ 412 (514)
Q Consensus 352 v~~-~~~i~~~l~~~---~~~~~---------------~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~ 412 (514)
++. ++++.+.++.. +.... ....|..+..+.+.++.+++.|+.+ +.+.++-+++.+++.
T Consensus 195 v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l--~~~~~~r~~~~~~~~ 272 (380)
T TIGR03588 195 VTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKL--DRFVAKRREIAARYD 272 (380)
T ss_pred EEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 665 46666655421 00000 0011223344566666677666655 346677788888888
Q ss_pred hhhhhccCCCceeE---EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--------------C--
Q 010250 413 DGVKAFSDSPIIGE---IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--------------G-- 473 (514)
Q Consensus 413 ~~L~~l~~~~~~~~---v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--------------g-- 473 (514)
+.|..+........ ....-.+..+.+..... . ..+.+.+.|.++||.++.. +
T Consensus 273 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~--------~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~ 343 (380)
T TIGR03588 273 RLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFG-C--------TRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDG 343 (380)
T ss_pred HHhcCCCCccCCCCCCCCEeEEEEEEEEECCcCC-C--------CHHHHHHHHHHCCCCcccCCcccccChhhhccCCcC
Confidence 88887632111111 01111223333432110 0 1456788899999876510 0
Q ss_pred ----------CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 474 ----------DNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 474 ----------~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
+.|++......|++|++.+++.|++++
T Consensus 344 ~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 344 DLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred CCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 346666666789999999999998764
No 291
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.52 E-value=9.5e-12 Score=127.60 Aligned_cols=312 Identities=14% Similarity=0.078 Sum_probs=182.3
Q ss_pred HHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEE
Q 010250 119 PRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 198 (514)
Q Consensus 119 p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii 198 (514)
++..+++.+.+.....+ +..+...++++.+++.+ +.+++++++||++|+..+++.+. . .++++||
T Consensus 11 ~~e~~a~~~~~~~~~~~-----~~g~~~~~~e~~la~~~---g~~~~v~~~sgt~aL~~~l~al~------~-~pGd~Vi 75 (376)
T TIGR02379 11 GQELEYIAEAISEGKLS-----GDGPFSRRCETWLENRT---GTKKALLTPSCTAALEMAALLLD------I-QPGDEVI 75 (376)
T ss_pred HHHHHHHHHHHHcCCcc-----CCcHHHHHHHHHHHHHh---CCCeEEEeCCHHHHHHHHHHHcC------C-CCcCEEE
Confidence 55678888887654321 12345688899998886 45789999999999998887541 1 3457899
Q ss_pred EEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEE
Q 010250 199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIA 277 (514)
Q Consensus 199 ~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aaviv 277 (514)
+.+.+|.+........+..+. .++.. +.|. .+.+++++.+. +++.+|+
T Consensus 76 v~~~t~~~~~~~~~~~G~~~v-------------~vd~d~~~~~-------------~d~~~le~~i~----~~tk~Ii- 124 (376)
T TIGR02379 76 MPSYTFVSTANAFVLRGAKIV-------------FVDIRPDTMN-------------IDETLIESAIT----HRTKAIV- 124 (376)
T ss_pred ECCCCcHHHHHHHHHcCCEEE-------------EEecCCCcCC-------------CCHHHHHHhcC----cCceEEE-
Confidence 999888775432222221111 11111 0000 11466776664 2455555
Q ss_pred ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh----hhhcCCcccceeEE
Q 010250 278 EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA----KALSSAYMPIGAIL 353 (514)
Q Consensus 278 Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s----K~l~gG~~pig~v~ 353 (514)
|++. .|...+ +++|.++|++||+++|.|++|+ +|.. +.-...|..-|+.+|| |.++.| ...|+++
T Consensus 125 -p~~~-~G~~~d----~~~I~~la~~~~i~vIeDaa~~-~g~~---~~~~~~g~~~~~~~fSf~~~K~l~~g-~~gG~v~ 193 (376)
T TIGR02379 125 -PVHY-AGVACD----MDTIMALANKHQLFVIEDAAQG-VMST---YKGRALGSIGHLGTFSFHETKNYTSG-GEGGALL 193 (376)
T ss_pred -EeCC-CCCccC----HHHHHHHHHHCCCEEEEECccc-cCCc---cCCcccCCCCCEEEEeCCCCCcCccc-CCceEEE
Confidence 4443 465555 8999999999999999999997 4321 1111223334777887 888766 4678877
Q ss_pred eC-HHHHHHhhhccC---CC-C-------c---ccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc
Q 010250 354 VS-PEVSEVIHSQSN---TL-G-------S---FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF 418 (514)
Q Consensus 354 ~~-~~i~~~l~~~~~---~~-~-------~---~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l 418 (514)
.+ +++.+.+..... .. . . ...|+.+-.+.+.++.+++.|+.+++ +.++-++..++..+.|..+
T Consensus 194 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~--~~~~r~~~~~~y~~~L~~~ 271 (376)
T TIGR02379 194 INDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQADR--INQDRLATWQLYQDALKPL 271 (376)
T ss_pred ECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHhHH--HHHHHHHHHHHHHHHhccC
Confidence 75 777777653211 00 0 0 01234444556777777777776653 4445555555566666543
Q ss_pred c-----CCCce-eEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--------------------
Q 010250 419 S-----DSPII-GEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------------------- 472 (514)
Q Consensus 419 ~-----~~~~~-~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------------------- 472 (514)
. ..+.+ ......-.++.+.+.... ..+.+.+.|.++||.++..
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----------~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~ 340 (376)
T TIGR02379 272 EEKGIIELPSIPNGCQHNAHMFYIKLKDED-----------DRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGED 340 (376)
T ss_pred CcCCeeeCCCCCCCCeeeeEEEEEEECCcC-----------CHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCC
Confidence 1 11111 011111112344443211 1346888999999887621
Q ss_pred -------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 473 -------GDNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 473 -------g~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
.+.|.+-.....|++|++.+++.|++++
T Consensus 341 p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 341 IYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred hHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 0123333334589999999999998764
No 292
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.52 E-value=3.1e-12 Score=142.74 Aligned_cols=314 Identities=12% Similarity=0.065 Sum_probs=193.3
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChh----HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGS----EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL 217 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGs----eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~ 217 (514)
+.+...++.+.|++++ +++.|.|+++++ +|+..+++ .|++.+|...| ++|+...+-||+....+...|.
T Consensus 566 ~~~~~~~~r~~la~i~---g~~~v~f~pnaga~ge~a~~~vi~---~~~~~~Gd~~r-~~vli~~~aH~sn~a~a~~~G~ 638 (993)
T PLN02414 566 YQEMFEDLGDLLCEIT---GFDSFSLQPNAGAAGEYAGLMVIR---AYHLSRGDHHR-NVCIIPVSAHGTNPASAAMCGM 638 (993)
T ss_pred HHHHHHHHHHHHHHHh---CCCeEEEcCCCcHHHHHHHHHHHH---HHHhccCCCCC-CEEEeCCCcCccCHHHHHHCCC
Confidence 4566678899999997 558999987666 55555555 44444343333 4566667889986655544332
Q ss_pred ccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHH
Q 010250 218 PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKV 297 (514)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l 297 (514)
.. ..+++.. .+..++++|++++.... +++++|++.-.++.+|...| +++|
T Consensus 639 ~v------------v~v~~d~-------------~G~vDle~L~~~i~~~~-~~ta~V~vt~pSn~gg~e~~----I~eI 688 (993)
T PLN02414 639 KI------------VVVGTDA-------------KGNINIEELRKAAEAHK-DNLAALMVTYPSTHGVYEEG----IDEI 688 (993)
T ss_pred EE------------EEeccCC-------------CCCcCHHHHHHHHhccC-CCeEEEEEECCCccccccch----HHHH
Confidence 21 1122211 01123688888886322 46888888888888887776 9999
Q ss_pred HHHHHhcCCEEEEechhcCcccccccceecccCCCCchhch--hhhhc----CCcccceeEEeCHHHHHHhhhccC-C--
Q 010250 298 QAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALS----SAYMPIGAILVSPEVSEVIHSQSN-T-- 368 (514)
Q Consensus 298 ~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~--sK~l~----gG~~pig~v~~~~~i~~~l~~~~~-~-- 368 (514)
.++|+++|+++++|-+|. .+..| ......+..|++++ .|.|+ +|+-.+|.+.++++++..+..... .
T Consensus 689 ~~iah~~Galv~vDgAq~-~a~~~---l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~ 764 (993)
T PLN02414 689 CDIIHDNGGQVYMDGANM-NAQVG---LTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTG 764 (993)
T ss_pred HHHHHHcCCEEEEEecCH-HhccC---cCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCC
Confidence 999999999999999996 22211 11222344688877 38655 344568999999988766643210 0
Q ss_pred --CCccc--ccCCC----CCcHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHhhhhhccCCCceeEEEeeee-e--E
Q 010250 369 --LGSFS--HGFTY----SGHPVSCAVAIEALKIYKERNI---VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGL-I--L 434 (514)
Q Consensus 369 --~~~~~--~~~t~----~~~pl~~aaa~aal~~~~~~~~---~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~-~--~ 434 (514)
.+... ..+|. .++.+.+.++..-+..+-.+++ .++...+..+++++|++..+..+.. ..|. + +
T Consensus 765 ~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~---~~~~~~hEf 841 (993)
T PLN02414 765 GIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRG---KNGTCAHEF 841 (993)
T ss_pred CcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccC---CCCCeeeeE
Confidence 00001 01232 2444555556666666655666 6677888899999997632212111 0111 1 1
Q ss_pred EEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE----eeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 435 GTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----VSGDNIMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 435 ~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
.+.+..-+ .. .......+.++|.+.|+... |..+.+|++|....|++|||+++++|.....+..+
T Consensus 842 v~~~~~l~--~~----~g~~~~di~krL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 842 IIDLRPFK--NT----AGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred EEeccccc--cc----cCCCHHHHHHHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 12222100 00 00013568889999998865 33567999999999999999999999888776653
No 293
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.51 E-value=9.9e-13 Score=135.16 Aligned_cols=235 Identities=14% Similarity=0.132 Sum_probs=145.6
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
.+...+|+++++++++ .+.++.++||+.|+..++.... ..++.||+..+.|++.......+.
T Consensus 52 np~~~~lE~~lA~l~g---~~~~l~~~sG~~Ai~~~l~~ll--------~~GD~Vlv~~~~y~~~~~~~~~~~------- 113 (385)
T PRK08574 52 NPTLRPLEEALAKLEG---GVDALAFNSGMAAISTLFFSLL--------KAGDRVVLPMEAYGTTLRLLKSLE------- 113 (385)
T ss_pred CccHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHHh--------CCCCEEEEcCCCchhHHHHHHHhh-------
Confidence 4556889999999974 3578889999999999987553 335688888888876432111110
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
.++....+ ++ + +.+++++++. +.++.+|++|.++++.|.+.+ +++|.++|+
T Consensus 114 ~~g~~v~~---~~-~------------------d~~~l~~~i~---~~~tklV~ie~p~NPtG~v~d----l~~I~~la~ 164 (385)
T PRK08574 114 KFGVKVVL---AY-P------------------STEDIIEAIK---EGRTKLVFIETMTNPTLKVID----VPEVAKAAK 164 (385)
T ss_pred ccCcEEEE---EC-C------------------CHHHHHHhcC---ccCceEEEEECCCCCCCEecC----HHHHHHHHH
Confidence 00100000 00 0 1356766664 225778889999998898887 899999999
Q ss_pred hcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccc-eeEEe-CHHHHHHhhhccCCCCcccccCCC
Q 010250 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPI-GAILV-SPEVSEVIHSQSNTLGSFSHGFTY 378 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pi-g~v~~-~~~i~~~l~~~~~~~~~~~~~~t~ 378 (514)
+||+++|+|++++ .+...... .+| .|++ +++|.++|..-.+ |++++ ++++.+.+... ......
T Consensus 165 ~~gi~livD~t~a-~~~~~~~l---~~G--aDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~-------~~~~g~ 231 (385)
T PRK08574 165 ELGAILVVDNTFA-TPLLYRPL---RHG--ADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEW-------RRRLGT 231 (385)
T ss_pred HcCCEEEEECCCC-ccccCChh---hhC--CcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHH-------HHhcCC
Confidence 9999999999985 22111111 123 4776 4679998732333 43555 67777766531 111234
Q ss_pred CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCceeE----------E--EeeeeeEEEEEc
Q 010250 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIGE----------I--RGTGLILGTEFA 439 (514)
Q Consensus 379 ~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~~----------v--~g~g~~~~i~~~ 439 (514)
..+|+.++.++..|+.+.. ..++..++...+.+.|+..+ .+|...+ . .|.|.++.|++.
T Consensus 232 ~~~p~~a~l~l~~l~tL~~--R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~ 307 (385)
T PRK08574 232 IMQPFEAYLVLRGLKTLEV--RFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVK 307 (385)
T ss_pred CCCHHHHHHHHcccCcHHH--HHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeC
Confidence 4568877777777776542 34455556666666665431 1222211 1 257889999986
No 294
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.50 E-value=1.4e-12 Score=134.40 Aligned_cols=237 Identities=14% Similarity=0.148 Sum_probs=144.0
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
.+...+|+++|+++.+ .+..+.++||++|+..++.... ..+++||+.++.|.+......... .
T Consensus 60 ~p~~~~Le~~lA~~~g---~~~~i~~~sG~~Ai~~~l~all--------~~Gd~Vl~~~~~y~~t~~~~~~~~------~ 122 (388)
T PRK07811 60 NPTRTALEEQLAALEG---GAYGRAFSSGMAATDCLLRAVL--------RPGDHIVIPNDAYGGTFRLIDKVF------T 122 (388)
T ss_pred CccHHHHHHHHHHHhC---CCceEEeCCHHHHHHHHHHHHh--------CCCCEEEEcCCCchHHHHHHHHhC------c
Confidence 3556789999999873 3456777899999999998664 345689998888865421110000 0
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
.++. .+..++.. +++++++.+. +++.+|++|..++..|.+.+ +++|.++|+
T Consensus 123 ~~gi---~~~~~d~~------------------d~e~l~~~i~----~~tklV~ie~p~NPtg~~~d----l~~I~~la~ 173 (388)
T PRK07811 123 RWGV---EYTPVDLS------------------DLDAVRAAIT----PRTKLIWVETPTNPLLSITD----IAALAELAH 173 (388)
T ss_pred CCCe---EEEEeCCC------------------CHHHHHHhcC----cCCeEEEEECCCCCcceecC----HHHHHHHHH
Confidence 0110 00011110 1466666654 35678888887777787766 999999999
Q ss_pred hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCC-cccceeEEeC-HHHHHHhhhccCCCCcccccCCC
Q 010250 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSA-YMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTY 378 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG-~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~ 378 (514)
+||+++|+||++.. +..+.. .+...|+++ ++|.++|. ....|+++++ +++.+.+... ......
T Consensus 174 ~~gi~lIvD~a~a~-~~~~~p-----~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~-------~~~~g~ 240 (388)
T PRK07811 174 DAGAKVVVDNTFAS-PYLQQP-----LALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFL-------QNGAGA 240 (388)
T ss_pred HcCCEEEEECCCCc-cccCCc-----hhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHH-------HHhcCC
Confidence 99999999999862 222221 123457764 56999872 2345777775 6666655421 111123
Q ss_pred CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-----CCcee----------EEEeeeeeEEEEEcc
Q 010250 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----------EIRGTGLILGTEFAD 440 (514)
Q Consensus 379 ~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----------~v~g~g~~~~i~~~~ 440 (514)
..+|..+..++..|+.+. ...++..++...+.+.|++.+. +|... ...|.|.++.|++..
T Consensus 241 ~~s~~~a~l~~~~L~tl~--~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 315 (388)
T PRK07811 241 VPGPFDAYLTLRGLKTLA--VRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAG 315 (388)
T ss_pred CCCHHHHHHHHhccCcHH--HHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCC
Confidence 345776666666665443 2345556677777777765321 22211 134678899999963
No 295
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.50 E-value=1.4e-12 Score=133.57 Aligned_cols=232 Identities=16% Similarity=0.153 Sum_probs=142.7
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 221 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~ 221 (514)
.++...+|+++|+++.+ .+..+.++||++|+..++.+. ..+++||+.++.|++.........
T Consensus 50 ~~pt~~~le~~la~l~g---~~~~~~~~sG~~ai~~~~~ll---------~~Gd~Vl~~~~~y~~t~~~~~~~~------ 111 (366)
T PRK08247 50 GNPTRGVLEQAIADLEG---GDQGFACSSGMAAIQLVMSLF---------RSGDELIVSSDLYGGTYRLFEEHW------ 111 (366)
T ss_pred CCchHHHHHHHHHHHhC---CCcEEEEcCHHHHHHHHHHHh---------CCCCEEEEecCCcCcHHHHHHHHh------
Confidence 34557889999999973 345788999999998776432 234689999999987421110000
Q ss_pred CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250 222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 301 (514)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~ 301 (514)
..++. .+..++.. +.+++++.+. +++.+|++|..++..|.+.+ +++|.++|
T Consensus 112 ~~~G~---~v~~vd~~------------------d~~~l~~~i~----~~tklv~le~P~NP~~~~~d----l~~I~~la 162 (366)
T PRK08247 112 KKWNV---RFVYVNTA------------------SLKAIEQAIT----PNTKAIFIETPTNPLMQETD----IAAIAKIA 162 (366)
T ss_pred hccCc---eEEEECCC------------------CHHHHHHhcc----cCceEEEEECCCCCCCcHHH----HHHHHHHH
Confidence 00110 01111110 1456666654 35678888777666665544 99999999
Q ss_pred HhcCCEEEEechhc-CcccccccceecccCCCCchh--chhhhhcCC-cccceeEEeC-HHHHHHhhhccCCCCcccccC
Q 010250 302 KKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLV--SFAKALSSA-YMPIGAILVS-PEVSEVIHSQSNTLGSFSHGF 376 (514)
Q Consensus 302 ~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG-~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~ 376 (514)
++||+++|+||++. ++ .+.. .....|++ +++|.++|. -...|+++++ +++.+.+... ....
T Consensus 163 ~~~g~~lIvD~t~~~~~--~~~p-----~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~-------~~~~ 228 (366)
T PRK08247 163 KKHGLLLIVDNTFYTPV--LQRP-----LEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYY-------QNAA 228 (366)
T ss_pred HHcCCEEEEECCCcccc--ccCc-----hhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHH-------HHhc
Confidence 99999999999984 22 1111 11234665 578999862 2356777776 6677666521 1122
Q ss_pred CCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeE--EEeeeeeEEEEEc
Q 010250 377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGE--IRGTGLILGTEFA 439 (514)
Q Consensus 377 t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~--v~g~g~~~~i~~~ 439 (514)
+...+|..+..++..|+.+.. ..++.+++.+.+.+.|++. |.+.. ..+.|.++.+++.
T Consensus 229 g~~~s~~~a~l~~~~l~tl~~--r~~~~~~~a~~l~~~L~~~---p~v~~v~~P~~gg~~sf~~~ 288 (366)
T PRK08247 229 GAVLSPFDSWLLIRGMKTLAL--RMRQHEENAKAIAAFLNEQ---PGVTDVLYPGRGGMLSFRLQ 288 (366)
T ss_pred CCCCChHHHHHHHhccCcHHH--HHHHHHHHHHHHHHHHHhC---CCeeEEecCCcCcEEEEEEC
Confidence 344567777777776664432 3445677778888877764 43333 3346888888874
No 296
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.50 E-value=1e-12 Score=134.70 Aligned_cols=237 Identities=16% Similarity=0.147 Sum_probs=142.6
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
++...+|+++|+++. +.+.+++++||++|+..++.... ..+++|++.++.|.+......... .
T Consensus 52 npt~~~Le~~lA~le---g~e~ivvt~gg~~Ai~~~l~all--------~~Gd~Il~~~~~y~~~~~~~~~~~------~ 114 (388)
T PRK08861 52 NPNRGLLEQTLSELE---SGKGAVVTNCGTSALNLWVSALL--------GPDDLIVAPHDCYGGTYRLFNTRA------N 114 (388)
T ss_pred CchHHHHHHHHHHHh---CCCeEEEECCHHHHHHHHHHHHc--------CCCCEEEEcCCchHHHHHHHHHHH------h
Confidence 455688999999987 35799999999999999997653 345678888888865321100000 0
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
..+. .+..++.+ +.+++++++. +++.+|++|.+++.+|.+.+ +++|.++|+
T Consensus 115 ~~gi---~v~~vd~~------------------d~e~l~~~i~----~~tklV~lesP~NPtG~v~d----l~~I~~la~ 165 (388)
T PRK08861 115 KGDF---KVQFVDQS------------------DAAALDAALA----KKPKLILLETPSNPLVRVVD----IAELCQKAK 165 (388)
T ss_pred cCCe---EEEEECCC------------------CHHHHHHhcC----cCCeEEEEECCCCCCCcccC----HHHHHHHHH
Confidence 0000 00000100 1356666654 35678888888888888887 899999999
Q ss_pred hcCCEEEEechhcCcccccccceecccCCCCchhch--hhhhcCC-cccceeEEeC-HHHHHHhhhccCCCCcccccCCC
Q 010250 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSA-YMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTY 378 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~--sK~l~gG-~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~ 378 (514)
++|+++|+||++... .. ........|+++. .|.++|. -...|+++++ +++.+.+... ......
T Consensus 166 ~~gi~vIvDea~~~~-~~-----~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~-------~~~~G~ 232 (388)
T PRK08861 166 AVGALVAVDNTFLTP-VL-----QKPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWW-------GNCIGA 232 (388)
T ss_pred HcCCEEEEECCcccc-cc-----CCCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHH-------HhccCC
Confidence 999999999998621 11 1112234687754 5999873 1335666664 5566655421 111233
Q ss_pred CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEcc
Q 010250 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD 440 (514)
Q Consensus 379 ~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~ 440 (514)
..+|..+...+..|+.+.- ..++..+++..+.+.|+..+ .+|... ...|.|.++.|++..
T Consensus 233 ~~~p~~a~l~~rgl~Tl~l--R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~ 307 (388)
T PRK08861 233 TGTPFDSYMTLRGIRTLGA--RMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAG 307 (388)
T ss_pred CCChHHHHHHHhcCCCHHH--HHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCC
Confidence 4567777766665554431 13444555555555555421 122111 134678899999863
No 297
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.50 E-value=1.5e-12 Score=134.68 Aligned_cols=239 Identities=15% Similarity=0.131 Sum_probs=144.9
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
.+...++++.|+++.+ .+..+.++||+.|+..+++... ..+++||+..+.| |.+....... ..
T Consensus 64 ~p~~~~le~~lA~l~g---~~~~i~~~sG~~Al~~~l~~ll--------~~Gd~Viv~~~~y-~~t~~~~~~~-----~~ 126 (403)
T PRK07503 64 NPTLALLEQRMASLEG---GEAAVALASGMGAITATLWTLL--------RPGDEVIVDQTLY-GCTFAFLHHG-----LG 126 (403)
T ss_pred CchHHHHHHHHHHHhC---CCcEEEEcCHHHHHHHHHHHHc--------CCCCEEEEccCcc-chHHHHHHHH-----Hh
Confidence 3456789999999874 3457888899999999987542 2346788877766 3322111000 00
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
.++. .+..++.. +.+++++.+. +++.+|++|.+++..|.+.+ +++|.++|+
T Consensus 127 ~~G~---~v~~vd~~------------------d~~~l~~~i~----~~tklV~le~p~NPtG~~~d----i~~I~~la~ 177 (403)
T PRK07503 127 EFGV---TVRHVDLT------------------DPAALKAAIS----DKTRMVYFETPANPNMRLVD----IAAVAEIAH 177 (403)
T ss_pred hCCE---EEEEeCCC------------------CHHHHHHhcC----ccCcEEEEeCCCCCCCeeeC----HHHHHHHHH
Confidence 0110 01111110 1366666664 35678888888888888876 999999999
Q ss_pred hcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcC-CcccceeEEeCHHHHHHhhhccCCCCcccccCCCC
Q 010250 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSS-AYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~g-G~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~ 379 (514)
+||+++|+|+++.. +..+.. .+...|++ +++|.++| |....|+++.++++++.+.... ........
T Consensus 178 ~~gi~lIvD~a~a~-~~~~~~-----l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~-----~~~~~g~~ 246 (403)
T PRK07503 178 GAGAKVVVDNTYCT-PYLQRP-----LELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEG-----LKDMTGAV 246 (403)
T ss_pred HcCCEEEEECCCcc-cccCCc-----hhhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhh-----HHhCcCCC
Confidence 99999999999973 222222 22345766 46799987 3355788888888887775210 01112355
Q ss_pred CcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEcc
Q 010250 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD 440 (514)
Q Consensus 380 ~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~ 440 (514)
.+|+.++.++..|+.+.. ..++..++...+.+.|++.. .+|... ...+.|.++.+++..
T Consensus 247 ~s~~~a~l~l~~L~tl~~--r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~ 320 (403)
T PRK07503 247 MSPFDAFLLMRGLKTLAL--RMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKG 320 (403)
T ss_pred CCHHHHHHHHcCcchHHH--HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECC
Confidence 678888888777776542 23334455555556555431 112111 123567788888753
No 298
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.50 E-value=1.2e-12 Score=134.02 Aligned_cols=235 Identities=12% Similarity=0.160 Sum_probs=143.5
Q ss_pred chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCC
Q 010250 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK 223 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~ 223 (514)
+...+|+++|+++.. -+.+++++||++|+..++...+ ..+++||+.++.|.+........ . ..
T Consensus 61 pt~~~Le~~iA~le~---~~~~~~~~sG~~Ai~~~l~all--------~~GD~Vvv~~~~Y~~t~~l~~~~---l---~~ 123 (394)
T PRK09028 61 PTHFAFQAAIVELEG---GAGTALYPSGAAAISNALLSFL--------KAGDHLLMVDSCYEPTRDLCDKI---L---KG 123 (394)
T ss_pred chHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEECCCcHHHHHHHHHh---h---hh
Confidence 345689999998853 2468999999999999987553 34578999999986653211000 0 00
Q ss_pred CCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh
Q 010250 224 FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK 303 (514)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~ 303 (514)
++.. +..++. . +.+.+++++. +++.+|++|.+.+..|.+.+ +++|.++|++
T Consensus 124 ~Gi~---v~~v~~----------~--------~~e~l~~~l~----~~TklV~lespsNPtg~v~d----l~~I~~la~~ 174 (394)
T PRK09028 124 FGIE---TTYYDP----------M--------IGEGIRELIR----PNTKVLFLESPGSITMEVQD----VPTLSRIAHE 174 (394)
T ss_pred cceE---EEEECC----------C--------CHHHHHHhcC----cCceEEEEECCCCCCCcHHH----HHHHHHHHHH
Confidence 1100 000000 0 0245666553 45789999999888888766 9999999999
Q ss_pred cCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCC-cccceeEEeCHHHHHHhhhccCCCCcccccCCCCC
Q 010250 304 YDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSA-YMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSG 380 (514)
Q Consensus 304 ~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG-~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~ 380 (514)
||+++|+|++|+. + ..+.......|+++ ..|.++|. -.-.|+++.++++.+.+.... ...| ...
T Consensus 175 ~g~~lvvD~t~a~----p--~~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~-----~~~G--~~~ 241 (394)
T PRK09028 175 HDIVVMLDNTWAS----P--INSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHS-----YLMG--QCT 241 (394)
T ss_pred cCCEEEEECCccc----c--ccCCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHH-----HhcC--CCC
Confidence 9999999999962 1 12333344568876 45999873 233455666777766554210 0112 235
Q ss_pred cHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEc
Q 010250 381 HPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFA 439 (514)
Q Consensus 381 ~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~ 439 (514)
+|..|...+..|+.+.- ..++..+++..+.+.|++.+ .+|... ...|.|.++.|++.
T Consensus 242 ~p~~a~l~~rgl~TL~l--R~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~ 313 (394)
T PRK09028 242 SPDDVYLAMRGLRTLGV--RLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLK 313 (394)
T ss_pred CHHHHHHHHcccCcHHH--HHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEEC
Confidence 67777766665554431 24555556666666665431 122111 13467889999986
No 299
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.49 E-value=2e-12 Score=134.46 Aligned_cols=244 Identities=16% Similarity=0.171 Sum_probs=147.5
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
.+...+|+++|+++.+ .+.+++++||++|+..++.... ...++||+....|+|........ .+
T Consensus 57 ~pt~~~Le~~lA~l~g---~~~~l~~ssG~~Ai~~al~al~--------~~Gd~Vl~~~~~Y~~t~~~~~~~--l~---- 119 (425)
T PRK06084 57 NPTNDVLEQRVAALEG---GVGALAVASGMAAITYAIQTIA--------EAGDNIVSVAKLYGGTYNLLAHT--LP---- 119 (425)
T ss_pred CchHHHHHHHHHHHhC---CCceeEehhHHHHHHHHHHHHh--------CCCCEEEEeCCCcchHHHHHHHh--cc----
Confidence 3456789999999873 3568899999999999998664 23468999999998743211100 00
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
.++. .+..++. .+.+++++.+. +++++|++|.+++..|.+.+ +++|.++|+
T Consensus 120 ~~gi---~v~~~d~------------------~d~e~le~ai~----~~tklV~lesp~NPtG~v~d----l~~I~~la~ 170 (425)
T PRK06084 120 RIGI---ETRFAAH------------------DDIAALEALID----ERTKAVFCESIGNPAGNIID----IQALADAAH 170 (425)
T ss_pred ccee---EEEEECC------------------CCHHHHHHHhc----cCCcEEEEeCCCCCCCeecC----HHHHHHHHH
Confidence 0010 0000110 01467777764 35678888999888998887 999999999
Q ss_pred hcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccceeEEeC-HHHH-HHhhhcc----C----C--
Q 010250 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAILVS-PEVS-EVIHSQS----N----T-- 368 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pig~v~~~-~~i~-~~l~~~~----~----~-- 368 (514)
+||+++|+||+++ .+... .......|++ +++|.++|....+|++++. +.+. ....... . .
T Consensus 171 ~~~i~vVvD~a~a-~~~~~-----~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (425)
T PRK06084 171 RHGVPLIVDNTVA-TPVLC-----RPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHG 244 (425)
T ss_pred HcCCEEEEECCCc-ccccC-----ChhhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCccccc
Confidence 9999999999996 32221 2223346877 5679999855778876663 3210 0100000 0 0
Q ss_pred ------CC----------cccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-----CCceeE-
Q 010250 369 ------LG----------SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIGE- 426 (514)
Q Consensus 369 ------~~----------~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~~- 426 (514)
.+ ....+.....+|..+...+..|+.+.. ..++..++...+.+.|++.+. +|....
T Consensus 245 ~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lrgl~tl~~--R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~ 322 (425)
T PRK06084 245 VTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQGLETLAL--RMERHTENALKVARYLQQHPQVAWVKYAGLPDH 322 (425)
T ss_pred chhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCcHHH--HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCc
Confidence 00 001122344567777777766665532 355666666677777765421 222111
Q ss_pred ---------EEe-eeeeEEEEEcc
Q 010250 427 ---------IRG-TGLILGTEFAD 440 (514)
Q Consensus 427 ---------v~g-~g~~~~i~~~~ 440 (514)
..| .|.++.|++..
T Consensus 323 p~~~~~~~~~~g~~gg~~s~~~~~ 346 (425)
T PRK06084 323 PEHELARRYMGGKPASILSFGIKG 346 (425)
T ss_pred ccHHHHHHhCCCCcceEEEEEecC
Confidence 234 68899999863
No 300
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.49 E-value=1.1e-11 Score=139.00 Aligned_cols=316 Identities=13% Similarity=0.121 Sum_probs=181.1
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEe-CChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFT-NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 221 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~-~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~ 221 (514)
.....++.+.|++++ +++.+.+. ++|+.|+.+++..++.|+..++..+|++ +....+-||+...++...|...
T Consensus 541 l~~i~e~q~~l~elt---G~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~-vlis~~aH~snp~sa~~~G~~v-- 614 (954)
T PRK05367 541 RELIDQLEAWLAEIT---GYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDV-CLIPSSAHGTNPASAVMAGMKV-- 614 (954)
T ss_pred HHHHHHHHHHHHHHH---CCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCE-EEEEchhhhhhHHHHHHCCCEE--
Confidence 355667888888887 45566664 5778888788878888876666544444 5555677776544443333221
Q ss_pred CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250 222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 301 (514)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~ 301 (514)
..+++... ...+.++|++.+... ..++++|++--... .|.+..+ +++|.++|
T Consensus 615 ----------v~v~~d~~-------------G~iD~~~L~~~i~~~-~~~la~V~it~pst-~G~~e~~---I~eI~~i~ 666 (954)
T PRK05367 615 ----------VVVACDEN-------------GNIDLDDLRAKAEEH-ADNLAAIMITYPST-HGVFEET---IREICEIV 666 (954)
T ss_pred ----------EEECCCCC-------------CCcCHHHHHHHHhcc-CCCeEEEEEEcCCC-CeeecCC---HHHHHHHH
Confidence 11222110 112257888777532 23566665544333 3554333 99999999
Q ss_pred HhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhc----CCcccceeEEeCHHHHHHhhhccCCCCcccc-
Q 010250 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALS----SAYMPIGAILVSPEVSEVIHSQSNTLGSFSH- 374 (514)
Q Consensus 302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~----gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~- 374 (514)
+++|+++++|.++.+ +-.+. ...-....|+++++ |.|+ +|+-.+|.+++++.+...+............
T Consensus 667 h~~G~~v~VDgA~~~-al~~l---~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~ 742 (954)
T PRK05367 667 HEHGGQVYLDGANMN-AQVGL---ARPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETG 742 (954)
T ss_pred HHcCCEEEEECcChh-hccCC---CChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCC
Confidence 999999999999962 11211 01112346888776 8764 4445577888887766555432100000000
Q ss_pred cCCCCCcHH----HHHHHHHHHHHHhhccHHHHHH---HHHHHHHhhhhhccCCCcee---EEEeeeeeEEEEEccCCCC
Q 010250 375 GFTYSGHPV----SCAVAIEALKIYKERNIVEQVN---KIAPKFQDGVKAFSDSPIIG---EIRGTGLILGTEFADNKSP 444 (514)
Q Consensus 375 ~~t~~~~pl----~~aaa~aal~~~~~~~~~~~~~---~~~~~l~~~L~~l~~~~~~~---~v~g~g~~~~i~~~~~~~~ 444 (514)
.++....+. .+..+...+..+-.+++.+..+ .+.+++.++|++.-+....+ .+. .. +.+++...+..
T Consensus 743 ~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~-~e--~i~~~~~~~~~ 819 (954)
T PRK05367 743 IGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVA-HE--CILDLRPLKES 819 (954)
T ss_pred cCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcc-cc--eEEEeeccccc
Confidence 011222233 2222334444454556665555 78889999887641111111 000 01 12222211100
Q ss_pred CCCCCCccchHHHHHHHHHHCCcEEEe----eCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 445 NEPFPPEWGIGAYFGAQCEKHGMLVRV----SGDNIMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 445 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~----~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
. ......+.++|.+.|+.... ..+.++++|....|++|||+++++|.....++.+
T Consensus 820 ~------g~~~~di~krL~d~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 820 T------GITVDDIAKRLIDYGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred C------CCCHHHHHHHHHHCCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence 0 00145688999999998764 2467999999999999999999999888776654
No 301
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.49 E-value=1.5e-12 Score=132.66 Aligned_cols=230 Identities=19% Similarity=0.150 Sum_probs=144.8
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
++...+|+++|+++. +.+.++.++||++|+..++.+. ..+++||+....|++....... . ..
T Consensus 53 ~p~~~~le~~lA~le---g~~~~v~~~sG~aAi~~~l~~l---------~~GD~VI~~~~~yg~~~~~~~~-~-----~~ 114 (364)
T PRK07269 53 NPTRAKLEETLAAIE---SADYALATSSGMSAIVLAFSVF---------PVGSKVVAVRDLYGGSFRWFNQ-Q-----EK 114 (364)
T ss_pred CccHHHHHHHHHHHh---CCCeEEEeCCHHHHHHHHHHHh---------CCCCEEEEecCCcCchHHHHHH-H-----Hh
Confidence 355688999999987 4568999999999999998533 2346888888877554211000 0 00
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
.++. .+. +. .+.+++++.+. +++.+|++|...+..|.+.+ +++|.++|+
T Consensus 115 ~~~~------~~~----------------~~-~d~~~l~~~i~----~~TklV~lesP~NPtg~~~d----i~~I~~la~ 163 (364)
T PRK07269 115 EGRF------HFT----------------YA-NTEEELIAAIE----EDTDIVYIETPTNPLMVEFD----IEKVAKLAH 163 (364)
T ss_pred cCcE------EEE----------------ec-CCHHHHHHhcC----cCceEEEEECCCCCCCeeeC----HHHHHHHHH
Confidence 0000 000 00 01356666664 35678888888777787776 999999999
Q ss_pred hcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCc-ccceeEEe-CHHHHHHhhhccCCCCcccccCCC
Q 010250 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAY-MPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTY 378 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~-~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~ 378 (514)
++|+++|+||++..- . .....+...|++++| |.++|.. .-.|++++ ++++.+.+... ......
T Consensus 164 ~~gi~vvvD~t~~~~-~-----~~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~-------~~~~G~ 230 (364)
T PRK07269 164 AKGAKVIVDNTFYSP-I-----YQRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYN-------LNTTGA 230 (364)
T ss_pred HcCCEEEEECCCccc-c-----cCCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHH-------HHHhCC
Confidence 999999999996411 1 112234457888655 9888621 12355666 46676666421 111124
Q ss_pred CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEE--EeeeeeEEEEEc
Q 010250 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI--RGTGLILGTEFA 439 (514)
Q Consensus 379 ~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v--~g~g~~~~i~~~ 439 (514)
..+|+.++.++..|+.+. ...++..++...+.+.|+.. |.+..+ +|.|.++.|++.
T Consensus 231 ~~s~~~a~l~~~~L~tL~--~r~~~~~~na~~~a~~L~~~---p~v~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 231 VLSPFDSYLLMRGLKTLS--LRMERSTANAQEVVAFLKKS---PAVKEVLYTGKGGMISFKVA 288 (364)
T ss_pred CCCHHHHHHHHcCCCcHH--HHHHHHHHHHHHHHHHHHhC---CCccEEeCCCcCcEEEEEEC
Confidence 567888888887777653 23556667777777777643 433332 467888899885
No 302
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.48 E-value=2e-12 Score=134.46 Aligned_cols=160 Identities=18% Similarity=0.175 Sum_probs=111.1
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP 218 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~ 218 (514)
..+...+|+++|+++.+ .+.+++++||++|+..++.... ..+++||+....|+|..... +...|..
T Consensus 55 ~~p~~~~le~~lA~l~g---~~~~v~~~sG~~Ai~~al~~l~--------~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~ 123 (418)
T TIGR01326 55 MNPTTDVLEQRIAALEG---GVAALAVASGQAAITYAILNLA--------QAGDNIVSSSYLYGGTYNLFKHTLKRLGIE 123 (418)
T ss_pred CChhHHHHHHHHHHHhC---CCeEEEEccHHHHHHHHHHHHh--------CCCCEEEEECCCcHHHHHHHHHHHHHcCcE
Confidence 34556899999999973 4679999999999999998664 23468899888887742111 0111110
Q ss_pred cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250 219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 298 (514)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~ 298 (514)
+..++.. +.+++++.+. +++++|++|.+++..|.+.+ +++|.
T Consensus 124 ------------v~~v~~~------------------d~~~l~~~l~----~~t~~V~le~p~NPtg~v~d----l~~I~ 165 (418)
T TIGR01326 124 ------------VRFVDPD------------------DPEEFEKAID----ENTKAVFAETIGNPAINVPD----IEAIA 165 (418)
T ss_pred ------------EEEECCC------------------CHHHHHHhcC----cCCeEEEEECCCCCCCeecC----HHHHH
Confidence 0011100 1466766664 35678889998888888876 99999
Q ss_pred HHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccceeEEeCH
Q 010250 299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAILVSP 356 (514)
Q Consensus 299 ~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pig~v~~~~ 356 (514)
++|++||+++|+||++. .+. ........+|++ +++|.++|.++++|++++++
T Consensus 166 ~la~~~~i~livD~t~~-~~~-----~~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 166 EVAHAHGVPLIVDNTFA-TPY-----LCRPIDHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred HHHHHcCCEEEEECCCc-hhh-----cCCchhcCCeEEEECccccccCCccceEEEEEec
Confidence 99999999999999986 221 122223346877 57899998558999988854
No 303
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.48 E-value=3.5e-12 Score=130.00 Aligned_cols=321 Identities=12% Similarity=0.058 Sum_probs=186.2
Q ss_pred CCHHHHHHHHHHHhcCC---cc-ccccccCC---chHHHHHHHHHHhcCc-CCCCeEEEeCChhHHHHHHHHHHHHHHhh
Q 010250 117 SEPRLVAAATAQLNTLP---FY-HSFWNRTT---KPSLDLAKELLEMFTA-SKMAKVFFTNSGSEANDTQVKLVWYYNNA 188 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~---~~-~~~~~~~~---~~~~ela~~L~~~~~~-~~~~~v~~~~sGseA~~~Alk~a~~~~~~ 188 (514)
-+++|++|+...+.+.. .+ +....... +...+..++|.+++.. .+.+-+++.+||+.|+|+++.-..
T Consensus 14 ~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~----- 88 (360)
T PRK05355 14 LPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLL----- 88 (360)
T ss_pred CCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcC-----
Confidence 47899999998874320 00 00101112 5667788888888853 222334556899999999987543
Q ss_pred cCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHH-HHHHh
Q 010250 189 LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED-LILKE 267 (514)
Q Consensus 189 ~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~-li~~~ 267 (514)
...++++....+..|....-+.- .++. . ..+..+..|.... ..++++ .+.
T Consensus 89 ---~~g~~~l~i~~G~fg~r~~~~a~--------~~g~--~--~~~~~~~~~g~~~------------~~~~~~~~l~-- 139 (360)
T PRK05355 89 ---GGGKKADYVDTGSWSKKAIKEAK--------KYGE--V--NVAASSEDDGFTY------------IPPLDEWQLS-- 139 (360)
T ss_pred ---CCCCeEEEEECCHHHHHHHHHHH--------HhCC--c--eEEecccccCCCC------------CCChhhccCC--
Confidence 23356777777776754322110 0110 0 0011111011000 112222 232
Q ss_pred CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCC
Q 010250 268 GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSA 345 (514)
Q Consensus 268 ~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG 345 (514)
+++.+|.+-..-..+|++.|+ +++| ||+++|+|-|++ +|.. ....+.+ |++++| |+++ .
T Consensus 140 --~~~~~V~~th~eTstGv~~~~---i~~i------~g~l~vVDavss-~g~~--~idv~~~----d~~~~ssqK~lg-P 200 (360)
T PRK05355 140 --DDAAYVHYTSNETIDGTEFHE---LPDT------GDVPLVADMSSD-ILSR--PIDVSKF----GLIYAGAQKNIG-P 200 (360)
T ss_pred --CCCCEEEEccCCCcceEecCc---cccc------CCCcEEEEcCcc-ccCc--cCCHHHc----cEEEEecccccc-C
Confidence 245566666666777888643 5555 899999999998 5422 2222322 566666 9884 4
Q ss_pred cccceeEEeCHHHHHHhhhc-cCCCC--c-ccccCCC-CCcHHHHHHHHHHHHHHhhc-c---HHHHHHHHHHHHHhhhh
Q 010250 346 YMPIGAILVSPEVSEVIHSQ-SNTLG--S-FSHGFTY-SGHPVSCAVAIEALKIYKER-N---IVEQVNKIAPKFQDGVK 416 (514)
Q Consensus 346 ~~pig~v~~~~~i~~~l~~~-~~~~~--~-~~~~~t~-~~~pl~~aaa~aal~~~~~~-~---~~~~~~~~~~~l~~~L~ 416 (514)
..+|++++++++.+.+.+. ..... . .....++ +.|-....+..++|+.+.++ + +.++.+++.++++++|+
T Consensus 201 -~Glg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~ 279 (360)
T PRK05355 201 -AGLTIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAID 279 (360)
T ss_pred -CceEEEEECHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHH
Confidence 4589999999998877541 10000 0 0111222 33444555666788888765 3 56788888889999998
Q ss_pred hccCCCceeE-EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---CCEEEEeCCCCCCHHHHHHH
Q 010250 417 AFSDSPIIGE-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GDNIMMSPPFIMSPEEVDEL 492 (514)
Q Consensus 417 ~l~~~~~~~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~~iRi~p~~~~t~e~id~~ 492 (514)
++.-...... -...+.+..|.+++.. ....+...+.++|+.+... .+.+|+++...+|+|||+++
T Consensus 280 ~~~~~~~~~~~~~rs~~v~sf~~~~~~-----------~~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l 348 (360)
T PRK05355 280 SSDFYRNPVAPEDRSRMNVPFTLADEE-----------LDKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQAL 348 (360)
T ss_pred hCCCcccCCChhhcCCcEEEEEcCChH-----------HHHHHHHHHHHCCCcccCCCCccCcEEEECCCCCCHHHHHHH
Confidence 8731111011 0112345566544320 1234656788899998443 24699999999999999999
Q ss_pred HHHHHHHHHH
Q 010250 493 ISKYGKALKA 502 (514)
Q Consensus 493 ~~~l~~~l~~ 502 (514)
++.|++.++.
T Consensus 349 ~~~l~~~~~~ 358 (360)
T PRK05355 349 VDFMKEFERR 358 (360)
T ss_pred HHHHHHHHHh
Confidence 9999997753
No 304
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.48 E-value=4.3e-12 Score=128.73 Aligned_cols=321 Identities=11% Similarity=0.031 Sum_probs=184.4
Q ss_pred CHHHHHHHHHHHhcCCcc----ccccccCC---chHHHHHHHHHHhcCcCCCCeEEEe-CChhHHHHHHHHHHHHHHhhc
Q 010250 118 EPRLVAAATAQLNTLPFY----HSFWNRTT---KPSLDLAKELLEMFTASKMAKVFFT-NSGSEANDTQVKLVWYYNNAL 189 (514)
Q Consensus 118 ~p~v~~A~~~~l~~~~~~----~~~~~~~~---~~~~ela~~L~~~~~~~~~~~v~~~-~sGseA~~~Alk~a~~~~~~~ 189 (514)
+..|++|+.+.+...... +....... +...+..+.|.+++....-.+|+|+ +|||+|+|+++....
T Consensus 4 p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~------ 77 (349)
T TIGR01364 4 PEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLL------ 77 (349)
T ss_pred CHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcC------
Confidence 567888988887642211 11111122 4556677888888853222457666 569999999997653
Q ss_pred CCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC
Q 010250 190 GRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP 269 (514)
Q Consensus 190 ~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~ 269 (514)
.+.++++....++.|....-+... ++. +..+..++.+ ++ ++ ..+++.... .
T Consensus 78 --~~~~~~l~i~~G~fg~r~~~~a~~--------~g~----~~~~~~~~~~--~~-~~---------~~~~~~~~~--~- 128 (349)
T TIGR01364 78 --AEGKVADYIVTGAWSKKAAKEAKK--------YGV----VNVVASGKEG--NY-TK---------IPDPSTWEI--S- 128 (349)
T ss_pred --CCCCeEEEEECCHHHHHHHHHHHH--------hCC----cEEEeccccC--CC-CC---------CCCHHhcCC--C-
Confidence 234677777777777643221110 110 0000000000 00 00 012222111 1
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcc
Q 010250 270 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYM 347 (514)
Q Consensus 270 ~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~ 347 (514)
.++.+|.+-..-..+|+..+ ++++.+++++++|-|++ +|.. ..-.+. -|++++| |+++ . .
T Consensus 129 ~~~~~v~~th~ETstGv~~~---------~l~~~~~~l~iVDavss-~g~~--~id~~~----~d~~~~ssqK~lg-P-~ 190 (349)
T TIGR01364 129 EDAAYVHYCANETIHGVEFR---------ELPDVKNAPLVADMSSN-ILSR--PIDVSK----FGLIYAGAQKNIG-P-A 190 (349)
T ss_pred CCCCEEEEcCCCCcccEecc---------eecccCCCeEEEEcccc-ccCc--cCCHHH----ccEEEEecccccC-C-C
Confidence 24556666666666677653 66777899999999998 5322 222222 2466665 9884 3 4
Q ss_pred cceeEEeCHHHHHHhhhccCCCCcc----cccCCC-CCcHHHHHHHHHHHHHHhhc-c---HHHHHHHHHHHHHhhhhhc
Q 010250 348 PIGAILVSPEVSEVIHSQSNTLGSF----SHGFTY-SGHPVSCAVAIEALKIYKER-N---IVEQVNKIAPKFQDGVKAF 418 (514)
Q Consensus 348 pig~v~~~~~i~~~l~~~~~~~~~~----~~~~t~-~~~pl~~aaa~aal~~~~~~-~---~~~~~~~~~~~l~~~L~~l 418 (514)
.+|.+++++++.+.+.+.......+ ....++ +.|-....+..++|+.+.++ + +.++.+++.++++++|+++
T Consensus 191 Glg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~ 270 (349)
T TIGR01364 191 GLTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNS 270 (349)
T ss_pred ceEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 5899999999988775421111100 112333 33444555566788888765 3 4677788888898888887
Q ss_pred cCC-CceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CEEEEeCCCCCCHHHHHHHH
Q 010250 419 SDS-PIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNIMMSPPFIMSPEEVDELI 493 (514)
Q Consensus 419 ~~~-~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~iRi~p~~~~t~e~id~~~ 493 (514)
... ...... .....++.+.+++. .....+...+.++|+.+.+.. +.+|+++...+|+||||.++
T Consensus 271 ~gl~~~~~~~~~rs~~v~sf~~~~~-----------~~~~~~~~~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~ 339 (349)
T TIGR01364 271 NGFYRNPVDPRNRSRMNVVFTLGNE-----------ELEKRFLKEAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALV 339 (349)
T ss_pred CCeeccCCCHHHcCCeEEEEecCCh-----------hHhHHHHHHHHHCCCcccCCccccCeeEEECcCCCCHHHHHHHH
Confidence 322 111110 11224455554432 112446568889999555432 46999999999999999999
Q ss_pred HHHHHHHHH
Q 010250 494 SKYGKALKA 502 (514)
Q Consensus 494 ~~l~~~l~~ 502 (514)
+.|++.+++
T Consensus 340 ~al~~~~~~ 348 (349)
T TIGR01364 340 DFMKEFQKK 348 (349)
T ss_pred HHHHHHHHh
Confidence 999986653
No 305
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.48 E-value=2.6e-11 Score=113.99 Aligned_cols=312 Identities=15% Similarity=0.131 Sum_probs=173.9
Q ss_pred CchHHHHHHHHHHhcCc-CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250 143 TKPSLDLAKELLEMFTA-SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 221 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~-~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~ 221 (514)
......+++.+.+.++. ...+.+.+||+.-.|.-.+..+.-.+. ..| ..|+.++-..+-|-|+....+.-.-...++
T Consensus 77 ~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~-sdG-~~k~illPLaPeYiGY~d~~l~~d~fVs~k 154 (417)
T COG3977 77 AVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRR-SDG-TEKKILLPLAPEYIGYADAGLEEDLFVSAK 154 (417)
T ss_pred hHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCcc-CCC-cceeEeeccChhhccccccccCccceeecc
Confidence 34455667777766643 234678889977777766666553221 111 123334446888888754433211111111
Q ss_pred CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250 222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 301 (514)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~ 301 (514)
|.....+ ...|+|+.+ ++.|+- .+.+++|++.-..+.+|.+. .++.+.+|.+|+
T Consensus 155 -------P~iel~~-~g~FKY~vD-----------F~~l~i------~e~~g~ic~SRPtNPTGNVl-TdeE~~kldalA 208 (417)
T COG3977 155 -------PNIELLP-AGQFKYHVD-----------FEHLHI------GESTGAICVSRPTNPTGNVL-TDEELAKLDALA 208 (417)
T ss_pred -------CCccccc-ccceeeccC-----------HHHccc------ccccceEEecCCCCCCCCcc-cHHHHHHHHHHh
Confidence 1111111 222333211 222221 25688888877766667554 678999999999
Q ss_pred HhcCCEEEEechhcCcccccccceecccCCCCchh---chhh-hhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCC
Q 010250 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV---SFAK-ALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 377 (514)
Q Consensus 302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv---~~sK-~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t 377 (514)
++||+.||.|.+|. .-..|--|.-...-..+.|+ ++|| +|.| .++|.++++++++..+.....- ...+.+.
T Consensus 209 ~~~giPliIDnAYg-~PFP~iifsd~~~~w~~NiilC~SLSK~GLPG--~R~GIiIane~viqaitnmn~i--isLap~~ 283 (417)
T COG3977 209 RQHGIPLIIDNAYG-VPFPGIIFSDATPLWNENIILCMSLSKLGLPG--SRCGIIIANEKVIQAITNMNGI--ISLAPGR 283 (417)
T ss_pred hhcCCcEEEecccC-CCCCceecccccccCCCCEEEEeehhhcCCCC--cceeEEEccHHHHHHHHhccce--eeecCCC
Confidence 99999999999985 42222222111112234554 4678 7776 8999999999999988742210 0011112
Q ss_pred CCCcHHHHHHHHHHHH-----HHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeE-EEEEccCCCCCCCCCC
Q 010250 378 YSGHPVSCAVAIEALK-----IYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLIL-GTEFADNKSPNEPFPP 450 (514)
Q Consensus 378 ~~~~pl~~aaa~aal~-----~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~-~i~~~~~~~~~~~~~~ 450 (514)
++.|.+...++ .+.++-+..-.+.+.+...+.|++. ...+.. --++.|.++ ++-|.+-..+
T Consensus 284 -----~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~-iHkpEGAIFlWLWf~dLPIt------ 351 (417)
T COG3977 284 -----MGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCL-IHKPEGAIFLWLWFKDLPIT------ 351 (417)
T ss_pred -----ccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCcccee-eecCCcceeehhhhccCCCC------
Confidence 22222222221 2222222222333333333333322 222322 234566654 4445442211
Q ss_pred ccchHHHHHHHHHHCCcEEEeeC--------------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 451 EWGIGAYFGAQCEKHGMLVRVSG--------------DNIMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 451 ~~~~~~~~~~~l~~~Gv~~~~~g--------------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
.+.+.++|+++|+++.|+. .++||+ +.-++++|+..+.+|.+.+++.-+
T Consensus 352 ----t~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn--~~~~~~~ie~Gva~lae~ve~~yq 414 (417)
T COG3977 352 ----TEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMN--YVPEPEKIEKGVAILAEEVERAYQ 414 (417)
T ss_pred ----HHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEe--cCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4568899999999998752 579999 899999999999999988876543
No 306
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.47 E-value=3.9e-11 Score=123.42 Aligned_cols=310 Identities=13% Similarity=0.104 Sum_probs=176.6
Q ss_pred HHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEE
Q 010250 119 PRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 198 (514)
Q Consensus 119 p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii 198 (514)
++-.+++.+.+.....+ +..+...++++++++.+ +.+++++++||++|+..++..+. . ..++.||
T Consensus 11 ~~~~~~~~~~l~~~~~~-----g~~~~~~~~e~~la~~~---g~~~~v~~~sgt~al~~~l~~~~------~-~~Gd~Vi 75 (375)
T PRK11706 11 GTELDYIQQAMSSGKLC-----GDGGFTRRCQQWLEQRF---GSAKVLLTPSCTAALEMAALLLD------I-QPGDEVI 75 (375)
T ss_pred HHHHHHHHHHHHcCCcc-----CCCHHHHHHHHHHHHHh---CCCeEEEECCHHHHHHHHHHHhC------C-CCCCEEE
Confidence 34466777777654321 12345678888898886 45789999999999998876541 1 2356899
Q ss_pred EEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEE
Q 010250 199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIA 277 (514)
Q Consensus 199 ~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aaviv 277 (514)
+...+|.+........+..+.+ ++.. +.| ..+.+++++.+. + ++.+|++
T Consensus 76 v~~~t~~~~~~~~~~~G~~~v~-------------~d~d~~~~-------------~~d~~~le~~i~---~-~tk~i~~ 125 (375)
T PRK11706 76 MPSYTFVSTANAFVLRGAKIVF-------------VDIRPDTM-------------NIDETLIEAAIT---P-KTRAIVP 125 (375)
T ss_pred ECCCCcHHHHHHHHHcCCEEEE-------------EecCCCcC-------------CcCHHHHHHhcC---C-CCeEEEE
Confidence 9888887654332222211111 1110 000 112467777664 2 3445553
Q ss_pred ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc--cccceecccCCCCchhchh----hhhcCCccccee
Q 010250 278 EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL--GTMFGCDKYSIKPDLVSFA----KALSSAYMPIGA 351 (514)
Q Consensus 278 Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~--G~~~~~~~~gv~pDiv~~s----K~l~gG~~pig~ 351 (514)
++ ..|...+ +++|.++|++||+++|.|++|+ +|.. |.. .|---|+.+|| |.++.| ...++
T Consensus 126 --~~-~~G~~~~----~~~i~~la~~~~i~vIeD~a~a-~g~~~~~~~-----~g~~~~~~~~Sf~~~K~l~~g-~gG~~ 191 (375)
T PRK11706 126 --VH-YAGVACE----MDTIMALAKKHNLFVVEDAAQG-VMSTYKGRA-----LGTIGHIGCFSFHETKNYTAG-EGGAL 191 (375)
T ss_pred --eC-CCCCccC----HHHHHHHHHHcCCEEEEECccc-cccccCCee-----eecCcCEEEEeCCCCcccccc-CCeEE
Confidence 22 3565554 8999999999999999999997 5432 211 12223777777 988755 33344
Q ss_pred EEeCHHHHHHhhhccCC---CCc-----------ccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhh
Q 010250 352 ILVSPEVSEVIHSQSNT---LGS-----------FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA 417 (514)
Q Consensus 352 v~~~~~i~~~l~~~~~~---~~~-----------~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 417 (514)
+..++++.+.+..-.+. ... ...|.++-.+.+.++.+++-|+.++ ...++-+++.+++.+.|..
T Consensus 192 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l~--~~~~~R~~~~~~~~~~L~~ 269 (375)
T PRK11706 192 LINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAAD--RINQRRLALWQRYYDALAP 269 (375)
T ss_pred EECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhcC
Confidence 44567777654421100 000 0123344445677777777776653 3455566666777777765
Q ss_pred ccCCCce------eEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----------------C-
Q 010250 418 FSDSPII------GEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----------------G- 473 (514)
Q Consensus 418 l~~~~~~------~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----------------g- 473 (514)
+...+.+ ........++.+.+.+.. ....+.+.|.++||.++.. +
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~ 338 (375)
T PRK11706 270 LAEAGRIELPSIPDDCKHNAHMFYIKLRDLE-----------DRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGE 338 (375)
T ss_pred CCcCCeeecCCCCCCCceeeEEEEEEECCcC-----------CHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCC
Confidence 5211111 111112234445443211 1456888999999986411 0
Q ss_pred ---------CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 474 ---------DNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 474 ---------~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
+.|.+-.....|++|++.+++.|++++
T Consensus 339 ~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 339 DRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred ChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 123332223478999999999988764
No 307
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.47 E-value=3.6e-12 Score=132.78 Aligned_cols=242 Identities=15% Similarity=0.165 Sum_probs=146.3
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
.+...+|+++|+++.+ .+.+++++||+.|+.++++.+. ..+++||+....|+|........ ..
T Consensus 62 ~p~~~~le~~lA~l~g---~~~al~~~SG~~Ai~~al~all--------~pGd~VIv~~~~y~~t~~~~~~~------~~ 124 (427)
T PRK05994 62 NPTNAVLEERVAALEG---GTAALAVASGHAAQFLVFHTLL--------QPGDEFIAARKLYGGSINQFGHA------FK 124 (427)
T ss_pred CccHHHHHHHHHHHhC---CCcEEEEcCHHHHHHHHHHHHh--------CCCCEEEEecCcchhHHHHHHHH------HH
Confidence 3456789999999873 3568999999999999998764 33578999999998752110000 00
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
.++. .+..++.. +.+++++.+. +++++|++|.+++..|.+.+ +++|.++|+
T Consensus 125 ~~G~---~v~~vd~~------------------d~~~l~~ai~----~~tklV~vesp~NptG~v~d----l~~I~~la~ 175 (427)
T PRK05994 125 SFGW---QVRWADAD------------------DPASFERAIT----PRTKAIFIESIANPGGTVTD----IAAIAEVAH 175 (427)
T ss_pred hcCc---EEEEECCC------------------CHHHHHHhcC----cCCeEEEEECCCCCCCeecC----HHHHHHHHH
Confidence 0110 01111110 1356666664 35788999999999998887 999999999
Q ss_pred hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccceeEEeC-HH----------------------
Q 010250 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGAILVS-PE---------------------- 357 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig~v~~~-~~---------------------- 357 (514)
+||+++|+|++++ .+. ........+|+++ ++|.++|..-++|+++.. ..
T Consensus 176 ~~gi~livD~a~a-~~~-----~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~ 249 (427)
T PRK05994 176 RAGLPLIVDNTLA-SPY-----LIRPIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGL 249 (427)
T ss_pred HcCCEEEEECCcc-ccc-----cCCccccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhh
Confidence 9999999999997 211 2233445678875 569998733466766552 21
Q ss_pred -HHHHhhhc-c---CCCC-cccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-----CCceeE
Q 010250 358 -VSEVIHSQ-S---NTLG-SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIGE 426 (514)
Q Consensus 358 -i~~~l~~~-~---~~~~-~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~~ 426 (514)
+.+.+... . .... ....| ...+|+.++..+..|+.+. ...++..++...+.+.|+..++ +|....
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~G--~~~~~~~A~l~~~~l~tL~--~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~ 325 (427)
T PRK05994 250 VLHETFGNFAFAIAARVLGLRDLG--PAISPFNAFLILTGIETLP--LRMQRHSDNALAVAEWLKGHPKVSWVNYAGLPD 325 (427)
T ss_pred hHHHHhhhhhhHHHHHHHHHHhcC--CCCCHHHHHHHHcCcccHH--HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCC
Confidence 11110000 0 0000 00111 2356777777776666553 2356666677777777765421 232211
Q ss_pred -----------EEeeeeeEEEEEcc
Q 010250 427 -----------IRGTGLILGTEFAD 440 (514)
Q Consensus 427 -----------v~g~g~~~~i~~~~ 440 (514)
..|.|.++.|++..
T Consensus 326 ~~~~~~~~~~~~~g~g~~~sf~l~~ 350 (427)
T PRK05994 326 DPYHALAQKYSPKGAGAVFTFGLKG 350 (427)
T ss_pred CccHHHHHHhcCCCceEEEEEEecC
Confidence 24678899999863
No 308
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.47 E-value=3.3e-11 Score=125.76 Aligned_cols=300 Identities=14% Similarity=0.132 Sum_probs=172.1
Q ss_pred hHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHH-HhhcCCCCccEEEEEecCCcccceeeeecCCCccccCC
Q 010250 145 PSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYY-NNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK 223 (514)
Q Consensus 145 ~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~-~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~ 223 (514)
...++++++++++ +.+++++++||++|+..|++.+... ....+-..++.||+...+|.+........+..+.
T Consensus 64 ~~~~fe~~lA~~~---g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv---- 136 (438)
T PRK15407 64 FNDAFEKKLAEFL---GVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPV---- 136 (438)
T ss_pred hHHHHHHHHHHHh---CCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEE----
Confidence 3578999999987 3468999999999999999865311 0001112347899999998765432222211111
Q ss_pred CCCCCCcccccCC-CCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 224 FDLPAPFVLHTDC-PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 224 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
.++. +..|. .+.+++++.+. +++++|++.+..|. .. .+++|+++|+
T Consensus 137 ---------~vdvd~~~~~-------------id~~~le~~i~----~~tkaVi~~~~~G~---p~----dl~~I~~la~ 183 (438)
T PRK15407 137 ---------FVDVELPTYN-------------IDASLLEAAVS----PKTKAIMIAHTLGN---PF----DLAAVKAFCD 183 (438)
T ss_pred ---------EEecCCCcCC-------------cCHHHHHHHcC----cCCeEEEEeCCCCC---hh----hHHHHHHHHH
Confidence 0111 01111 12466776663 35677888776442 22 3899999999
Q ss_pred hcCCEEEEechhcCcccccccceecccCCCCchhchh----hhhcCCcccceeEEeCH-HHHHHhhh---ccCC------
Q 010250 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA----KALSSAYMPIGAILVSP-EVSEVIHS---QSNT------ 368 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s----K~l~gG~~pig~v~~~~-~i~~~l~~---~~~~------ 368 (514)
+||++||.|++|+ +|-.-.. ...|-.-|+.+|| |.++.| .-|+++.++ ++.+.+.. .+..
T Consensus 184 ~~gi~vIeDaa~a-~G~~~~g---~~~G~~gd~~~fSf~~~k~~~~g--eGG~l~t~d~~l~~~~~~~~~~G~~~~~~~~ 257 (438)
T PRK15407 184 KHNLWLIEDNCDA-LGSTYDG---RMTGTFGDIATLSFYPAHHITMG--EGGAVFTNDPLLKKIIESFRDWGRDCWCAPG 257 (438)
T ss_pred HCCCEEEEECccc-hhhhcCC---eeeeccCceEEEeCCCCCCcccc--CceEEEECCHHHHHHHHHHHHhCcccccccc
Confidence 9999999999997 5422111 1112223677665 667654 237777754 44443322 1100
Q ss_pred -----------------C--C-c---ccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC---CC
Q 010250 369 -----------------L--G-S---FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD---SP 422 (514)
Q Consensus 369 -----------------~--~-~---~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~---~~ 422 (514)
. . . ...|+.+..+.+.++.++.-|+.++ +..++-+++.+++.+.|..+.. .+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l~--~~~~~R~~~a~~y~~~L~~~~~~~~~~ 335 (438)
T PRK15407 258 CDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKLP--GFIEARKANFAYLKEGLASLEDFLILP 335 (438)
T ss_pred cccccccccccccccccccccccccccccccccCccHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccCCCccccC
Confidence 0 0 0 0134455667888888888888774 3566677777777777766521 11
Q ss_pred ce-eEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------------------C---------
Q 010250 423 II-GEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------------------G--------- 473 (514)
Q Consensus 423 ~~-~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------------------g--------- 473 (514)
.. ......-.++.+.+.+... . ....+.+.|.++||-++.. +
T Consensus 336 ~~~~~~~~~~~~~~i~~~~~~~-~--------~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~ 406 (438)
T PRK15407 336 EATPNSDPSWFGFPITVKEDAG-F--------TRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIM 406 (438)
T ss_pred cCCCCCeeEEEEEEEEECCcCC-C--------CHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHH
Confidence 11 0111111233344432110 0 1346788999999865410 0
Q ss_pred -CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 474 -DNIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 474 -~~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
..|-+-.....|++|++.++++|+++++
T Consensus 407 ~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 407 NDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred hCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 1122222345789999999999998874
No 309
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.47 E-value=4.6e-12 Score=130.69 Aligned_cols=212 Identities=16% Similarity=0.153 Sum_probs=128.3
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP 218 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~ 218 (514)
.++...+|+++++++. +.+.+++++||++|+..++.... ..+++||+.++.|.+..... ....|..
T Consensus 63 ~~pt~~~Le~~lA~l~---g~~~~l~~~sgt~Ai~~~l~al~--------~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~ 131 (394)
T PRK07050 63 ATPTSLALAQRLAEIE---GGRHALLQPSGLAAISLVYFGLV--------KAGDDVLIPDNAYGPNRDHGEWLARDFGIT 131 (394)
T ss_pred CCHHHHHHHHHHHHHh---CCCeEEEeccHHHHHHHHHHHHh--------CCCCEEEEecCCcccHHHHHHHHHHhcCeE
Confidence 3455678999999986 34689999999999999997663 34578999998887643110 1111110
Q ss_pred cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250 219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 298 (514)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~ 298 (514)
+..++.. +.+++++++. +++.+|++|...+..|...+ +++|.
T Consensus 132 ------------v~~vd~~------------------~~~~l~~~i~----~~tklV~le~p~Np~~~~~d----i~~I~ 173 (394)
T PRK07050 132 ------------VRFYDPL------------------IGAGIADLIQ----PNTRLIWLEAPGSVTMEVPD----VPAIT 173 (394)
T ss_pred ------------EEEECCC------------------CHHHHHHhcC----CCCeEEEEECCCCCCccHhh----HHHHH
Confidence 0001100 0145666653 35677888877776665544 99999
Q ss_pred HHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCc-ccceeEEe-CHHHHHHhhhccCCCCcccc
Q 010250 299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAY-MPIGAILV-SPEVSEVIHSQSNTLGSFSH 374 (514)
Q Consensus 299 ~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~-~pig~v~~-~~~i~~~l~~~~~~~~~~~~ 374 (514)
++|+++|+++|+|++|+ .|.. +.......|++ +++|.++|+. .+.|++++ ++++.+.+... ..
T Consensus 174 ~ia~~~gi~livD~a~a-~~~~-----~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~-------~~ 240 (394)
T PRK07050 174 AAARARGVVTAIDNTYS-AGLA-----FKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLA-------RM 240 (394)
T ss_pred HHHHHcCCEEEEECCcc-cccc-----cCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHH-------HH
Confidence 99999999999999986 2211 11112234766 4779998642 46777776 56777766531 11
Q ss_pred cCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhh
Q 010250 375 GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA 417 (514)
Q Consensus 375 ~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 417 (514)
....+.+|..+..++..|+.+.. ..++..+++..+.+.|++
T Consensus 241 ~~G~~~~~~~a~l~lr~l~tl~~--Rl~~~~~~a~~la~~L~~ 281 (394)
T PRK07050 241 RLGIGVSADDCSLVLRGLPSLQV--RLAAHDRSALEVAEWLKA 281 (394)
T ss_pred hcCCCCCHHHHHHHHcCCCcHHH--HHHHHHHHHHHHHHHHHh
Confidence 11224456665555443433321 234444555556665554
No 310
>PLN02880 tyrosine decarboxylase
Probab=99.46 E-value=2.4e-11 Score=128.34 Aligned_cols=330 Identities=11% Similarity=0.064 Sum_probs=185.7
Q ss_pred CchHHHHHHHHHHhcCcCCC------CeEEEeCChhHHHHHHHHHHHHHHhh-cCCCC-ccEEEEEecCCcccceeeeec
Q 010250 143 TKPSLDLAKELLEMFTASKM------AKVFFTNSGSEANDTQVKLVWYYNNA-LGRPN-KKKFIARQKSYHGSTLIAASL 214 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~------~~v~~~~sGseA~~~Alk~a~~~~~~-~~~~~-~~~ii~~~~~yHG~t~~~~~~ 214 (514)
+....++.+.++++++...- .-.++++||||||..|+.+||.+..+ .+..+ +.-+++.+..-|-+...+...
T Consensus 121 ~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~ 200 (490)
T PLN02880 121 TELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQI 200 (490)
T ss_pred HHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHH
Confidence 34455566777777632210 23688999999999999999865322 11111 233555566668776555554
Q ss_pred CCCccccCCCCCCCCcccccCCCC--cccCCCCCCChhHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCC
Q 010250 215 SGLPALHQKFDLPAPFVLHTDCPH--YWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPP 290 (514)
Q Consensus 215 s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~ 290 (514)
.|.+. ..+..++++. .++ .+.+.|++.|.+. ....+.+|+..--....|.+-|
T Consensus 201 lGlg~---------~~v~~Vp~d~~~~~~-------------md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp- 257 (490)
T PLN02880 201 AGIHP---------ENCRLLKTDSSTNYA-------------LAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP- 257 (490)
T ss_pred cCCCH---------HHEEEeecCCCcCCc-------------CCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc-
Confidence 44321 1122233321 111 2257788877642 2234566666666666788877
Q ss_pred hhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCC-CCchhch--hhhhcCCcccceeEEeCHH--HHHHhhhc
Q 010250 291 ATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI-KPDLVSF--AKALSSAYMPIGAILVSPE--VSEVIHSQ 365 (514)
Q Consensus 291 ~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv-~pDiv~~--sK~l~gG~~pig~v~~~~~--i~~~l~~~ 365 (514)
|++|.++|++||+++++|-++.|+-..-..+-....|+ .+|-+++ -|.+... ++.|+++.++. +...+...
T Consensus 258 ---l~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P-~~~g~llvr~~~~l~~~~~~~ 333 (490)
T PLN02880 258 ---LLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTN-FDCSLLWVKDRNALIQSLSTN 333 (490)
T ss_pred ---HHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCC-ccEEEEEEeCHHHHHHHHccC
Confidence 99999999999999999999986532211111123454 4787765 4988776 68888888642 22323211
Q ss_pred cCCCCc-------cccc--CCC-CCcHHHHHHHHHHHHHHhhccHHHHHH---HHHHHHHhhhhhccCCCceeEEEeeee
Q 010250 366 SNTLGS-------FSHG--FTY-SGHPVSCAVAIEALKIYKERNIVEQVN---KIAPKFQDGVKAFSDSPIIGEIRGTGL 432 (514)
Q Consensus 366 ~~~~~~-------~~~~--~t~-~~~pl~~aaa~aal~~~~~~~~~~~~~---~~~~~l~~~L~~l~~~~~~~~v~g~g~ 432 (514)
..+... .... .+. .+..........+|+.+-.+++.++++ ++.+++.+.|++..+..++.+ ....
T Consensus 334 ~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~--~~~~ 411 (490)
T PLN02880 334 PEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTP--RIFS 411 (490)
T ss_pred HHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC--CceE
Confidence 100000 0000 000 111122333445566666677777777 888888888876533333222 1233
Q ss_pred eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe----eC-CEEEEeCCCC-CCHHHHHHHHHHHHHHHHHHH
Q 010250 433 ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV----SG-DNIMMSPPFI-MSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 433 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~----~g-~~iRi~p~~~-~t~e~id~~~~~l~~~l~~~~ 504 (514)
++.|.+.+..... .........+.++|.+.|-+... .| ..+|+++.-. .|++||+.+++.|.+..+++.
T Consensus 412 iv~Fr~~~~~~~~---~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~ 486 (490)
T PLN02880 412 LVCFRLVPPKNNE---DNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLL 486 (490)
T ss_pred EEEEEEeCCCCCh---hhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5556654321110 00012344566777776654432 23 3599987544 456999999999998877664
No 311
>PRK04311 selenocysteine synthase; Provisional
Probab=99.46 E-value=2.3e-10 Score=119.57 Aligned_cols=318 Identities=14% Similarity=0.142 Sum_probs=176.9
Q ss_pred CCHHHHHHHHHHHhcCCccc-ccc-ccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCc
Q 010250 117 SEPRLVAAATAQLNTLPFYH-SFW-NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK 194 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~~~-~~~-~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~ 194 (514)
-++++.+|+.+.+..+.... ... +...+....+++.+++++ +.+.+++++||+.|+..++... ..+
T Consensus 98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~---Gae~a~vv~sgtaAl~l~l~~l---------~~G 165 (464)
T PRK04311 98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT---GAEDALVVNNNAAAVLLALNAL---------AAG 165 (464)
T ss_pred CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh---CCCeEEEECCHHHHHHHHHHHh---------CCC
Confidence 46899999999887543110 010 111233467888888887 3457899999999999888543 334
Q ss_pred cEEEEEecCCc--cccee---eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC
Q 010250 195 KKFIARQKSYH--GSTLI---AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP 269 (514)
Q Consensus 195 ~~ii~~~~~yH--G~t~~---~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~ 269 (514)
++||+.++.+. |.+.. .+...|... ..++..+ . .+.+++++.+.
T Consensus 166 deVIvs~~e~~~~ggs~~i~~~~~~~G~~l------------~~v~~~~--------~-------t~~~dle~aI~---- 214 (464)
T PRK04311 166 KEVIVSRGELVEIGGAFRIPDVMRQAGARL------------VEVGTTN--------R-------THLRDYEQAIN---- 214 (464)
T ss_pred CEEEEcchhhhhcCcchhhHHHHHHCCcEE------------EEECCCC--------C-------CCHHHHHHhcC----
Confidence 67777765332 22111 111111110 0011000 0 01467777774
Q ss_pred CcEEEEEEccccC--CCC--cccCChhHHHHHHHHHHhcCCEEEEechhcCccccc------ccceecccCCCCchhchh
Q 010250 270 ETIAAFIAEPVIG--AGG--VIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG------TMFGCDKYSIKPDLVSFA 339 (514)
Q Consensus 270 ~~~aavivEpv~~--~~G--~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G------~~~~~~~~gv~pDiv~~s 339 (514)
+++++|+++...+ ..| ..++ +++|.++|++||+++|+|....-++-.+ .....+......|++++|
T Consensus 215 ~~TklV~~vh~sN~~i~G~~~~~d----l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fS 290 (464)
T PRK04311 215 ENTALLLKVHTSNYRIEGFTKEVS----LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFS 290 (464)
T ss_pred ccCeEEEEEcCCCccccccCCcCC----HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEec
Confidence 3456666665544 234 3344 9999999999999999998421111111 111112222457999988
Q ss_pred --hhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccH------------HHH
Q 010250 340 --KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNI------------VEQ 403 (514)
Q Consensus 340 --K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~------------~~~ 403 (514)
|.++|. ..|++++++++++.+.... ..-.+..+-+..++-.++|..+.+ +.+ .++
T Consensus 291 g~K~LgGp--~~G~i~g~~~li~~l~~~~-------~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~ 361 (464)
T PRK04311 291 GDKLLGGP--QAGIIVGKKELIARLKKHP-------LKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEE 361 (464)
T ss_pred CcccccCC--ceEEEEEcHHHHHHHhhch-------hHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHH
Confidence 999885 3788889999988776311 111222223344444445543321 111 256
Q ss_pred HHHHHHHHHhhhhhccCCCceeEEE------eeeee-------EEEEEccCCCCCCCCCCccchHHHHHHHHHH--CCcE
Q 010250 404 VNKIAPKFQDGVKAFSDSPIIGEIR------GTGLI-------LGTEFADNKSPNEPFPPEWGIGAYFGAQCEK--HGML 468 (514)
Q Consensus 404 ~~~~~~~l~~~L~~l~~~~~~~~v~------g~g~~-------~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~Gv~ 468 (514)
..++++.+.+.|+..........+. |-|.+ +.+.+.... .....+...|++ ..|+
T Consensus 362 ~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~----------~~~~~l~~~lr~~~~~i~ 431 (464)
T PRK04311 362 LRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKD----------RSLEALAARLRLLPPPVI 431 (464)
T ss_pred HHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCC----------CCHHHHHHHHhcCCCCEE
Confidence 6667777777776541111111111 11221 222232211 124567777775 4577
Q ss_pred EEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 469 VRVSGDNIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 469 ~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
.+...+.+.+-+ .++.++|++.++++|.+.+.
T Consensus 432 ~r~~~~~~~ld~-r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 432 GRIEDGRLLLDL-RTLEEEDEERLAAALLEALN 463 (464)
T ss_pred EEEECCEEEEEe-CcCCHHHHHHHHHHHHHHhh
Confidence 777777788876 47788999999999988753
No 312
>PLN02509 cystathionine beta-lyase
Probab=99.45 E-value=4.3e-12 Score=132.39 Aligned_cols=230 Identities=16% Similarity=0.172 Sum_probs=141.8
Q ss_pred chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCccccee---eeecCCCccc
Q 010250 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI---AASLSGLPAL 220 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~---~~~~s~~~~~ 220 (514)
+...+++++++++. +.+.+++++||+.|+..++.+. ..+++||+.++.|++.... .+...|...
T Consensus 133 pt~~aLE~~lA~le---g~e~ai~~~SG~aAi~~il~ll---------~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v- 199 (464)
T PLN02509 133 PTRDALESLLAKLD---KADRAFCFTSGMAALSAVTHLI---------KNGEEIVAGDDVYGGSDRLLSQVVPRSGVVV- 199 (464)
T ss_pred HHHHHHHHHHHHHh---CCCEEEEeCcHHHHHHHHHHHh---------CCCCEEEEcCCchhhHHHHHHHHHHHCCeEE-
Confidence 45788999999986 3467888899998876555332 3356899988888764211 011111110
Q ss_pred cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHH
Q 010250 221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV 300 (514)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l 300 (514)
..++. .+.+++++.+. +++.+|++|.+.+..|.+.+ +++|.++
T Consensus 200 -----------~~vd~------------------~d~e~l~~ai~----~~TklV~lesPsNPtG~i~D----l~~I~~l 242 (464)
T PLN02509 200 -----------KRVNT------------------TNLDEVAAAIG----PQTKLVWLESPTNPRQQISD----IRKIAEM 242 (464)
T ss_pred -----------EEeCC------------------CCHHHHHHhCC----cCCeEEEEECCCCCCCCHHH----HHHHHHH
Confidence 00110 01355666553 35678899999888888766 9999999
Q ss_pred HHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcC-CcccceeEEeC-HHHHHHhhhccCCCCcccccC
Q 010250 301 VKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSS-AYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGF 376 (514)
Q Consensus 301 ~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~g-G~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~ 376 (514)
|++||+++|+||+|. .+..+.. .+...|+++ ++|.|+| |..-.|+++++ +.+.+.+... ....
T Consensus 243 Ak~~g~~lIVD~A~a-~~~~~~p-----l~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~-------~~~~ 309 (464)
T PLN02509 243 AHAQGALVLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFL-------QNSE 309 (464)
T ss_pred HHHcCCEEEEECCcc-ccccCCh-----hhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHH-------HHhc
Confidence 999999999999985 3333322 233468775 5699987 32224555554 4444443211 1111
Q ss_pred CCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEE
Q 010250 377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEF 438 (514)
Q Consensus 377 t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~ 438 (514)
....+|..++.++..|+.+.. ..++..++.+.+.+.|++.+ .+|... ...|.|.++.|++
T Consensus 310 g~~l~p~~A~l~lr~L~tL~~--R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~ 384 (464)
T PLN02509 310 GSGLAPFDCWLCLRGIKTMAL--RIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFIT 384 (464)
T ss_pred CCCcCHHHHHHHHhhhhhHHH--HHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEe
Confidence 122478888888888887743 46667777777777776532 122211 1346688888888
No 313
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.44 E-value=1.4e-11 Score=116.50 Aligned_cols=285 Identities=15% Similarity=0.145 Sum_probs=171.8
Q ss_pred CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccC
Q 010250 163 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRY 242 (514)
Q Consensus 163 ~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (514)
.-..+..||+.+.|+|+--.. .+.++|+++..+-+|....... .+-++ .+..++ ..|..
T Consensus 69 ~tf~isgsGh~g~E~al~N~l--------ePgd~vLv~~~G~wg~ra~D~~------~r~ga-----~V~~v~--~~~G~ 127 (385)
T KOG2862|consen 69 QTFVISGSGHSGWEAALVNLL--------EPGDNVLVVSTGTWGQRAADCA------RRYGA-----EVDVVE--ADIGQ 127 (385)
T ss_pred ceEEEecCCcchHHHHHHhhc--------CCCCeEEEEEechHHHHHHHHH------HhhCc-----eeeEEe--cCccc
Confidence 456788899999999986543 2356788877776664322111 01111 111111 11111
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc
Q 010250 243 AHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT 322 (514)
Q Consensus 243 ~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~ 322 (514)
..+ ++++...+.+ .++.+|.+-..-+.+|+..+- ++.+.++|++|+++|++|-|-+ +| |.
T Consensus 128 ~~~-----------le~i~~~lsq---h~p~~vfv~hgdsSTgV~q~~---~~~~g~lc~k~~~lllVD~VaS-lg--gt 187 (385)
T KOG2862|consen 128 AVP-----------LEEITEKLSQ---HKPKAVFVTHGDSSTGVLQDL---LAISGELCHKHEALLLVDTVAS-LG--GT 187 (385)
T ss_pred Ccc-----------HHHHHHHHHh---cCCceEEEEecCccccccchH---HHHHHHHhhcCCeEEEEechhh-cC--Cc
Confidence 111 4667666654 455677777777788888773 7778999999999999999987 54 44
Q ss_pred cceecccCCCCchhc--hhhhhcCCcccceeEEeCHHHHHHhhhccCCCCccccc----CCCC-----------CcHH-H
Q 010250 323 MFGCDKYSIKPDLVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHG----FTYS-----------GHPV-S 384 (514)
Q Consensus 323 ~~~~~~~gv~pDiv~--~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~----~t~~-----------~~pl-~ 384 (514)
.|.++.+|| |+.- --|+|++. ..++.++.++..++.++.+.+++-.+... .+|+ ..|+ .
T Consensus 188 ~F~mDewgV--DvaytgSQKaL~aP-~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~l 264 (385)
T KOG2862|consen 188 EFEMDEWGV--DVAYTGSQKALGAP-AGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQL 264 (385)
T ss_pred cceehhhcc--cEEEecchhhcCCC-CCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHH
Confidence 788898988 5543 34999985 45667888999999988755432222111 0111 1133 3
Q ss_pred HHHHHHHHHHHhhc---cHHHHHHHHHHHHHhhhhhccCCCceeE-EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHH
Q 010250 385 CAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGE-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGA 460 (514)
Q Consensus 385 ~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 460 (514)
.-.-.+||+.+.++ +..++.++++++++..|+++.-...+.+ -........+. .|+..+| ..++.
T Consensus 265 ly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~--------vp~gvDw---~dVv~ 333 (385)
T KOG2862|consen 265 LYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVK--------VPYGVDW---KDVVA 333 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeee--------cCCCCCH---HHHHH
Confidence 34445777777664 4578889999999999988611111111 00011111222 1222233 34667
Q ss_pred HHHHCCcEEEe------eCCEEEEeCCC-CCCHHHHHHHHHHHHHHHHH
Q 010250 461 QCEKHGMLVRV------SGDNIMMSPPF-IMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 461 ~l~~~Gv~~~~------~g~~iRi~p~~-~~t~e~id~~~~~l~~~l~~ 502 (514)
++..++.+... .|..+||..-- +.+.|.|+..++.|+.++.+
T Consensus 334 ~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 334 YAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred HHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 77777544332 24678987443 34778899999988888754
No 314
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.44 E-value=1.8e-11 Score=137.21 Aligned_cols=357 Identities=15% Similarity=0.135 Sum_probs=198.5
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHH-HHHhcC-Ccccc---ccccCCchHHHHHHHHHHhcCcCCCC-eEEEeCChh
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAAT-AQLNTL-PFYHS---FWNRTTKPSLDLAKELLEMFTASKMA-KVFFTNSGS 172 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~-~~l~~~-~~~~~---~~~~~~~~~~ela~~L~~~~~~~~~~-~v~~~~sGs 172 (514)
+..|||..+.. .-.|..++++. +.+... ...++ ......+...+..++++++++....+ .|+|+++.|
T Consensus 34 ~~iYLD~Aatt------~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT 107 (805)
T PLN02724 34 GVVYLDHAGAT------LYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGAT 107 (805)
T ss_pred CCEeEeCCCCC------CCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChH
Confidence 36899986652 22444555544 444332 11111 11112344566778888888643334 589999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250 173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY 252 (514)
Q Consensus 173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (514)
+|+..+..... - .+++.||+ ....|.+......+.. +.+.. +..++.+.... .+... ...
T Consensus 108 ~alnlva~~l~------~-~~gd~Iv~-t~~eH~svl~~~~~a~----~~G~~-----v~~v~~~~~~~--~~~~~-~g~ 167 (805)
T PLN02724 108 AALKLVGETFP------W-SSESHFCY-TLENHNSVLGIREYAL----EKGAA-----AIAVDIEEAAN--QPTNS-QGS 167 (805)
T ss_pred HHHHHHHHHCC------C-CCCCeEEE-eeccccchHHHHHHHH----HcCCe-----EEeccchhccc--ccccc-ccc
Confidence 99998865431 1 22345665 5566655432221110 00110 00111110000 00000 000
Q ss_pred HHHHHHHHHHHHH----H--hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc--------CCEEEEechhcCcc
Q 010250 253 STRLANNLEDLIL----K--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY--------DILFIADEVICAFG 318 (514)
Q Consensus 253 ~~~~~~~le~li~----~--~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~--------gillI~DEv~tG~g 318 (514)
.....++|++.+. . ...+++.+|.+-.+.+..|.+.| ++.|.++++.. ++++++|-+|+ +|
T Consensus 168 ~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~p----i~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~-~g 242 (805)
T PLN02724 168 VVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFP----LDLVKLIKDNQHSNFSKSGRWMVLLDAAKG-CG 242 (805)
T ss_pred cccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCC----HHHHHHHHHhcccccccCcceEEEeehhhh-cC
Confidence 0001134444321 1 11234578888889999999998 77665555532 36899999997 54
Q ss_pred cccccceecccCCCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCc--------------------ccccC
Q 010250 319 RLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGS--------------------FSHGF 376 (514)
Q Consensus 319 r~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~--------------------~~~~~ 376 (514)
.. .++...+.+|.+++| |.++|. ..+|++++++++.+.+.+.-...+. +.. +
T Consensus 243 ~~----piDv~~~~~Dfl~~S~HK~~GgP-~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~-G 316 (805)
T PLN02724 243 TS----PPDLSRYPADFVVVSFYKIFGYP-TGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFED-G 316 (805)
T ss_pred CC----CCChhhcCCCEEEEecceeccCC-CCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcC-C
Confidence 33 334445568999887 877654 4589999999987776532000000 000 0
Q ss_pred CCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhccC---CCceeEE---------EeeeeeEEEEEccC
Q 010250 377 TYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSD---SPIIGEI---------RGTGLILGTEFADN 441 (514)
Q Consensus 377 t~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~---~~~~~~v---------~g~g~~~~i~~~~~ 441 (514)
+.|..+.++..++++.+.+ +.+.++...+.+++.+.|+++.. .+.+.-. ..++.++.|.+...
T Consensus 317 --T~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~ 394 (805)
T PLN02724 317 --TISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRA 394 (805)
T ss_pred --CcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcC
Confidence 2345666666677877765 45678899999999999988731 1222111 13566777777653
Q ss_pred CCCCCCCCCccchHHHHHHHHHHCCcEEEee----------------------------------------CCEEEEeCC
Q 010250 442 KSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------------------------------------GDNIMMSPP 481 (514)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------------------------------------g~~iRi~p~ 481 (514)
..... . ...+...+.++||.++.+ .+.+|+|..
T Consensus 395 ~~~~v------~-~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g 467 (805)
T PLN02724 395 DGSWV------G-HREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFG 467 (805)
T ss_pred CCCEe------C-HHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcC
Confidence 32110 0 112333334567776521 145999999
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q 010250 482 FIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 482 ~~~t~e~id~~~~~l~~~l~ 501 (514)
+..|.+|||++++.|++...
T Consensus 468 ~ynt~eDvd~lv~~l~~~~~ 487 (805)
T PLN02724 468 YMSTFEDCQKFIDFIISSFV 487 (805)
T ss_pred ccCCHHHHHHHHHHHHHHhh
Confidence 99999999999999999763
No 315
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.43 E-value=3.9e-12 Score=130.57 Aligned_cols=279 Identities=18% Similarity=0.212 Sum_probs=159.3
Q ss_pred chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCccc
Q 010250 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPAL 220 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~~~ 220 (514)
+...+++++++++++ .+.+++++||+.|+..++.++ ..+++||+.+..|++..... ....|..
T Consensus 47 p~~~~le~~la~l~g---~~~~l~~~sG~~al~~~l~ll---------~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~-- 112 (378)
T TIGR01329 47 PTRTALESLLAKLDK---ADRAFAFSSGMAALDVITRLL---------NNGDEIIAGDDLYGGTDRLLTQVVPRSGVV-- 112 (378)
T ss_pred hHHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHh---------CCCCEEEEcCCCchHHHHHHHHHHHHcCcE--
Confidence 346789999999874 367888999999888766532 23467888888776542110 0001111
Q ss_pred cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHH
Q 010250 221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV 300 (514)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l 300 (514)
+..++.. +.+++++.+. +++.+|++|.+.+..|.+.+ +++|.++
T Consensus 113 ----------v~~vd~~------------------d~~~le~~i~----~~tklv~le~psnptg~v~d----l~~I~~l 156 (378)
T TIGR01329 113 ----------VVHVDTT------------------DLDKVKAALG----PKTKLVLLESPTNPLQKIVD----IRKISEM 156 (378)
T ss_pred ----------EEEeCCC------------------CHHHHHHhcC----cCceEEEEECCCCCCCeeec----HHHHHHH
Confidence 1111110 1466766664 46789999988888898887 9999999
Q ss_pred HHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCC-cccceeEEeC-HHHHHHhhhccCCCCcccccC
Q 010250 301 VKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSA-YMPIGAILVS-PEVSEVIHSQSNTLGSFSHGF 376 (514)
Q Consensus 301 ~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG-~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~ 376 (514)
|++||+++|+|+++. .+... ...+...|+++ .+|.++|+ ....|+++++ +++.+.+... ....
T Consensus 157 a~~~g~~vivD~a~~-~~~~~-----~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~-------~~~~ 223 (378)
T TIGR01329 157 AHAQNALVVVDNTMM-SPLLC-----NPLELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFL-------QNST 223 (378)
T ss_pred HHHcCCEEEEECCCc-ccccC-----ChhhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHH-------HHhc
Confidence 999999999999984 22111 11122458775 45999873 2346777774 4555555421 1111
Q ss_pred CCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEccC
Q 010250 377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFADN 441 (514)
Q Consensus 377 t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~~ 441 (514)
....+|..+...+..++.+. ...++..++...+.+.|++.. .+|... ...|.|.++.|++.+.
T Consensus 224 G~~~~~~~a~l~~~~l~tl~--~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~ 301 (378)
T TIGR01329 224 GSGLAPFDCWLLLRGIKTLA--IRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSV 301 (378)
T ss_pred CCcCCHHHHHHHHccCCCHH--HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCH
Confidence 23345666655444444332 123444444455555554321 112111 1236778899988321
Q ss_pred CCCCCCCCCccchHHHHHHHHHHCCcEEEee----------------------------CCEEEEeCCCCCCHHHHHHHH
Q 010250 442 KSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------------------------GDNIMMSPPFIMSPEEVDELI 493 (514)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------------------------g~~iRi~p~~~~t~e~id~~~ 493 (514)
. ....|...|...++.++.+ .+.|||+. --|+++.++
T Consensus 302 ~-----------~~~~~~~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~sv----GlE~~~dl~ 366 (378)
T TIGR01329 302 A-----------LSKRLVEATKLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSV----GIEDVDDLI 366 (378)
T ss_pred H-----------HHHHHHHhCcCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEe----ccCCHHHHH
Confidence 1 1334555554333333211 13588883 345677777
Q ss_pred HHHHHHHHH
Q 010250 494 SKYGKALKA 502 (514)
Q Consensus 494 ~~l~~~l~~ 502 (514)
+-|+++|++
T Consensus 367 ~dl~~al~~ 375 (378)
T TIGR01329 367 SDLDIAFVT 375 (378)
T ss_pred HHHHHHHHh
Confidence 777777764
No 316
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.43 E-value=7.5e-12 Score=130.26 Aligned_cols=160 Identities=19% Similarity=0.193 Sum_probs=104.9
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
.+....|++.|+++.+ .+.+++++||+.|+..++.... ..+++|++.++.|++......... .
T Consensus 63 ~p~~~~Le~~lA~leg---~~~al~~~sG~~Ai~~al~~ll--------~~GD~Vlv~~~~y~~t~~~~~~~~------~ 125 (431)
T PRK08248 63 NPTTDVFEKRIAALEG---GIGALAVSSGQAAITYSILNIA--------SAGDEIVSSSSLYGGTYNLFAHTL------P 125 (431)
T ss_pred CchHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEccCchhhHHHHHHHHH------H
Confidence 3456789999999873 4678999999999999987653 345688888888866421110000 0
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
.++. .+..++.. +.+++++++. +++.+|+++...+..|.+.+ +++|.++|+
T Consensus 126 ~~Gv---~v~~vd~~------------------d~e~l~~ai~----~~tklV~l~sp~NPtG~v~d----i~~I~~la~ 176 (431)
T PRK08248 126 KLGI---TVKFVDPS------------------DPENFEAAIT----DKTKALFAETIGNPKGDVLD----IEAVAAIAH 176 (431)
T ss_pred hCCE---EEEEECCC------------------CHHHHHHhcC----CCCeEEEEECCCCCCCcccC----HHHHHHHHH
Confidence 0110 00111110 1466666664 35678888888788898887 899999999
Q ss_pred hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccceeEEe
Q 010250 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGAILV 354 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig~v~~ 354 (514)
++|+++|+|+++. .+.. ........|+++ ++|.++|.+..+|++++
T Consensus 177 ~~gi~vIvD~t~a-~~~~-----~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~ 224 (431)
T PRK08248 177 EHGIPLIVDNTFA-SPYL-----LRPIEHGADIVVHSATKFIGGHGTSIGGVIV 224 (431)
T ss_pred HcCCEEEEeCCCC-cccc-----CChhHcCCCEEEEcCccccCCCCCceEEEEE
Confidence 9999999999985 1111 111123467775 56999985467777666
No 317
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.43 E-value=1e-11 Score=128.44 Aligned_cols=234 Identities=15% Similarity=0.200 Sum_probs=145.2
Q ss_pred chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCccc
Q 010250 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPAL 220 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~~~ 220 (514)
+...+|++.++++.+ -+.++.++||+.|+.+++..+. ..+++||+....|.+..... +..-|...
T Consensus 61 Ptv~~lE~~la~leg---~~~av~~~SG~aAi~~al~all--------~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v- 128 (432)
T PRK06702 61 PTLAAFEQKLAELEG---GVGAVATASGQAAIMLAVLNIC--------SSGDHLLCSSTVYGGTFNLFGVSLRKLGIDV- 128 (432)
T ss_pred cHHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHhc--------CCCCEEEECCCchHHHHHHHHHHHHHCCCEE-
Confidence 456889999999863 3568999999999999997553 34578999999997653221 11111110
Q ss_pred cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHH
Q 010250 221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV 300 (514)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l 300 (514)
.+ ++.- .+.++++++|. +++.+|++|...+..+.+.+ +++|.++
T Consensus 129 --------~~---vd~~-----------------~d~~~l~~~I~----~~Tk~I~~e~pgnP~~~v~D----i~~I~~i 172 (432)
T PRK06702 129 --------TF---FNPN-----------------LTADEIVALAN----DKTKLVYAESLGNPAMNVLN----FKEFSDA 172 (432)
T ss_pred --------EE---ECCC-----------------CCHHHHHHhCC----cCCeEEEEEcCCCccccccC----HHHHHHH
Confidence 00 1100 01466777775 35678888887777777776 9999999
Q ss_pred HHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccceeEEe-CH----------HHHH-------
Q 010250 301 VKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAILV-SP----------EVSE------- 360 (514)
Q Consensus 301 ~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pig~v~~-~~----------~i~~------- 360 (514)
|++||+++|+|+++. .+..+..+..-.||+ +++|-++|...-+|+++. +. ++.+
T Consensus 173 A~~~gi~livD~T~~------tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~ 246 (432)
T PRK06702 173 AKELEVPFIVDNTLA------TPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHG 246 (432)
T ss_pred HHHcCCEEEEECCCC------chhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccc
Confidence 999999999999863 233344444456776 567988873334444443 21 1110
Q ss_pred --------------HhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CC
Q 010250 361 --------------VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DS 421 (514)
Q Consensus 361 --------------~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~ 421 (514)
.... .....+....+|+.+..++..|+.+. -..++..++...+.+.|++.+ .+
T Consensus 247 ~~~~~~~~~~~~~~~~~~------~~~~~~g~~~sp~~a~l~~rgL~Tl~--lR~~r~~~Na~~la~~L~~~p~V~~V~y 318 (432)
T PRK06702 247 VSYVQNFGAAAYIVKARV------QLLRDYGNCMSPFNAYISNIGLETLH--LRMERHSENALAVAKWLADHERIEWVNY 318 (432)
T ss_pred cchhhccchhhHHHHHHH------HHHHHccCCCCHHHHHHHHhccCcHH--HHHHHHHHHHHHHHHHHHhCCCcceEEC
Confidence 0000 01112344778888888887777553 234555677777777776542 12
Q ss_pred CceeE----------E-EeeeeeEEEEEc
Q 010250 422 PIIGE----------I-RGTGLILGTEFA 439 (514)
Q Consensus 422 ~~~~~----------v-~g~g~~~~i~~~ 439 (514)
|.... . .|.|.++.|++.
T Consensus 319 Pgl~~~p~~~l~~~~~~~g~gg~~sf~l~ 347 (432)
T PRK06702 319 PGLDSNENYSLAQKYLKKGASGVLTFGIK 347 (432)
T ss_pred CCCCCCccHHHHHHhCcCCCceEEEEEec
Confidence 32211 1 467889999986
No 318
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.42 E-value=1.7e-11 Score=127.49 Aligned_cols=161 Identities=15% Similarity=0.131 Sum_probs=102.2
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
++...+|+++|+++. +.+.+++++||+.|+..++.... ..+++||+....|.+........ ..
T Consensus 68 ~p~~~~Le~~lA~l~---g~~~av~~sSG~aAi~~al~all--------~~Gd~Vv~~~~~y~~t~~~~~~~------l~ 130 (436)
T PRK07812 68 NPTQDVVEQRIAALE---GGVAALLLASGQAAETFAILNLA--------GAGDHIVSSPRLYGGTYNLFHYT------LP 130 (436)
T ss_pred CchHHHHHHHHHHHh---CCCeEEEEccHHHHHHHHHHHHh--------CCCCEEEEeCCcchHHHHHHHHH------hh
Confidence 355678999999986 34578999999999999986553 33467888777665432110000 00
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
.++. .+..++.+ .+.+++++.+. +++.+|++|.+.++.|.+.+ +++|.++|+
T Consensus 131 ~~Gi---~v~~vdd~-----------------~d~e~l~~ai~----~~tklV~ie~~sNp~G~v~D----l~~I~~la~ 182 (436)
T PRK07812 131 KLGI---EVSFVEDP-----------------DDLDAWRAAVR----PNTKAFFAETISNPQIDVLD----IPGVAEVAH 182 (436)
T ss_pred cCeE---EEEEECCC-----------------CCHHHHHHhCC----CCCeEEEEECCCCCCCeecC----HHHHHHHHH
Confidence 0110 00001000 01355665553 45789999999999999988 999999999
Q ss_pred hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccceeEEe
Q 010250 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGAILV 354 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig~v~~ 354 (514)
+||+++|+|++++ .+... .......|+++ ++|.++|.+--+|+++.
T Consensus 183 ~~gi~liVD~t~a-~~~~~-----~pl~~GaDivv~S~tK~lgg~G~~i~G~vv 230 (436)
T PRK07812 183 EAGVPLIVDNTIA-TPYLI-----RPLEHGADIVVHSATKYLGGHGTAIAGVIV 230 (436)
T ss_pred HcCCEEEEECCCc-ccccC-----CchhcCCCEEEEecccccCCCCCeEEEEEE
Confidence 9999999999886 22221 12223467764 66998873234555555
No 319
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.42 E-value=2.6e-10 Score=118.82 Aligned_cols=310 Identities=16% Similarity=0.162 Sum_probs=170.4
Q ss_pred CCHHHHHHHHHHHhcCCccc-cc-cccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCc
Q 010250 117 SEPRLVAAATAQLNTLPFYH-SF-WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK 194 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~~~-~~-~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~ 194 (514)
-++++++|+.+.+..+.... .. .+........+++.++++++ .+.+++++||+.|+..++... ..+
T Consensus 93 l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~g---ae~alvv~sg~aAi~l~l~~l---------~~G 160 (454)
T TIGR00474 93 LAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTG---AEDALVVNNNAAAVLLALNTL---------AKG 160 (454)
T ss_pred CCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHh---------CCc
Confidence 47999999999887543110 00 01122445778899999873 345788999999998888542 345
Q ss_pred cEEEEEecCC---ccccee--eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC
Q 010250 195 KKFIARQKSY---HGSTLI--AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP 269 (514)
Q Consensus 195 ~~ii~~~~~y---HG~t~~--~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~ 269 (514)
+.||+.++.+ .|.... .+..+|... ..++.. .. .+.+++++.+.
T Consensus 161 deVIvs~~e~v~~ggs~~i~~~~~~~G~~~------------~~v~~~--------~~-------~~l~dle~aI~---- 209 (454)
T TIGR00474 161 KEVIVSRGELVEIGGSFRIPDVMEQSGAKL------------VEVGTT--------NR-------THLKDYEDAIT---- 209 (454)
T ss_pred CEEEECCChhhhhcchhhHHHHHHHcCCEE------------EEeCCC--------CC-------CCHHHHHHhcC----
Confidence 6787776653 232111 111112111 001100 00 01466777664
Q ss_pred CcEEEEEEccccC--CCC--cccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc---------ceecccCCCCchh
Q 010250 270 ETIAAFIAEPVIG--AGG--VIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM---------FGCDKYSIKPDLV 336 (514)
Q Consensus 270 ~~~aavivEpv~~--~~G--~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~---------~~~~~~gv~pDiv 336 (514)
+++++|+++...+ ..| .+++ +++|.++|++||+++|+|.. +|..+.. ...+......|++
T Consensus 210 ~~T~lv~~~h~sN~~~~G~~~~~d----l~~I~~la~~~g~~vivD~~---sG~l~~~~~~gl~~~p~~~~~~~~GaDiv 282 (454)
T TIGR00474 210 ENTALLLKVHTSNYRIVGFTEEVS----IAELVALGREHGLPVMEDLG---SGSLVDLSRYGLPDEPTVQEVIAAGVDLV 282 (454)
T ss_pred cCCEEEEEEccCcccccCCCCCCC----HHHHHHHHHHcCCeEEEECC---CcccccchhccCCCCcccccHhHcCCCEE
Confidence 3456666655543 235 3555 99999999999999999963 3333221 1112223457999
Q ss_pred chh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc-c-H------------
Q 010250 337 SFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER-N-I------------ 400 (514)
Q Consensus 337 ~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~-~-~------------ 400 (514)
++| |.|+|. ..|++++++++++.+.... ..-....+-+..++..+++..+... + +
T Consensus 283 ~fSg~K~LgGp--~~G~i~g~~~~i~~l~~~~-------l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~ 353 (454)
T TIGR00474 283 TFSGDKLLGGP--QAGIIVGKKELIERLKKNP-------LTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQS 353 (454)
T ss_pred EecCccccCCC--eEEEEEECHHHHHhhhhch-------hHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccC
Confidence 998 999875 3688889999887765321 0011122233334444444433211 0 1
Q ss_pred HHHHHHHHHHHHhhhhhccCCCceeEE------Eeeeee-------EEEEEccCCCCCCCCCCccchHHHHHHHHHHCC-
Q 010250 401 VEQVNKIAPKFQDGVKAFSDSPIIGEI------RGTGLI-------LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG- 466 (514)
Q Consensus 401 ~~~~~~~~~~l~~~L~~l~~~~~~~~v------~g~g~~-------~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G- 466 (514)
.++.++++..+.+.|+..-...+...+ -|-|.+ +.+.+.... .....+.+.|++..
T Consensus 354 ~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~----------~~~~~l~~~lr~~~~ 423 (454)
T TIGR00474 354 PEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTPDG----------LSAEKLEARLRELPP 423 (454)
T ss_pred HHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEecCC----------CCHHHHHHHHhcCCC
Confidence 235666677777777653111111111 111221 223332211 01455777777544
Q ss_pred -cEEEeeCCEEEEeCCCCCCHHHHHHHHHHH
Q 010250 467 -MLVRVSGDNIMMSPPFIMSPEEVDELISKY 496 (514)
Q Consensus 467 -v~~~~~g~~iRi~p~~~~t~e~id~~~~~l 496 (514)
|+.+...+.+.+-+ .++.++|++.++++|
T Consensus 424 ~ii~r~~~~~~~ld~-r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 424 PIIGRIEDDRFLLDL-RTLLEDEEELLIEAL 453 (454)
T ss_pred CEEEEEECCEEEEEe-CcCCHHHHHHHHHHh
Confidence 77776677777776 367888988888765
No 320
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.41 E-value=8.4e-11 Score=124.55 Aligned_cols=302 Identities=16% Similarity=0.125 Sum_probs=164.0
Q ss_pred EEEeCChhHHHHHHHHHHHHHHhhcC-C----------------CCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250 165 VFFTNSGSEANDTQVKLVWYYNNALG-R----------------PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 227 (514)
Q Consensus 165 v~~~~sGseA~~~Alk~a~~~~~~~~-~----------------~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~ 227 (514)
-.|++|||+||..|+.+||....... . ..++.+|+.+..-|-+...+....|..
T Consensus 162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg--------- 232 (522)
T TIGR03799 162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIG--------- 232 (522)
T ss_pred eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCC---------
Confidence 57899999999999999986532110 0 012345666666666654333222221
Q ss_pred CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC--CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC
Q 010250 228 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD 305 (514)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~--~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~g 305 (514)
...+..+++...++ .+.++|++.+.+.. ...+.+|+......+.|.+.| +++|.++|++||
T Consensus 233 ~~~v~~vp~d~~g~-------------~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDp----l~eIa~i~~~~g 295 (522)
T TIGR03799 233 RDNLIAIKTDANNR-------------IDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDP----LDEMADIAQELG 295 (522)
T ss_pred cccEEEEEeCCCCc-------------CCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCC----HHHHHHHHHHcC
Confidence 01122233322211 23578888775421 123444444444557798988 999999999999
Q ss_pred CEEEEechhcCcccccccceecccCC-CCchhchh--hhhcCCcccceeEEeC-HHHHHHhhhccCCC---Cccc-ccCC
Q 010250 306 ILFIADEVICAFGRLGTMFGCDKYSI-KPDLVSFA--KALSSAYMPIGAILVS-PEVSEVIHSQSNTL---GSFS-HGFT 377 (514)
Q Consensus 306 illI~DEv~tG~gr~G~~~~~~~~gv-~pDiv~~s--K~l~gG~~pig~v~~~-~~i~~~l~~~~~~~---~~~~-~~~t 377 (514)
+++++|-+|.|....-..+.....++ ..|.++++ |.+.+. +++|+++.+ ++..+.+.....+. +... ...+
T Consensus 296 ~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P-~g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~ 374 (522)
T TIGR03799 296 CHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVP-MGAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHT 374 (522)
T ss_pred CeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcC-cccEEEEEeCHHHHHHhccCcchhcCCCCCccccce
Confidence 99999999986421111000112355 57888877 888876 688999886 45555554321110 0000 0012
Q ss_pred CCCc-HHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCC------
Q 010250 378 YSGH-PVSCAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEP------ 447 (514)
Q Consensus 378 ~~~~-pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~------ 447 (514)
+.++ +.......++|+.+..+ .+.++..++.++|.+.|++..+..++.. ..-.++.|.+.+.......
T Consensus 375 legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~--p~l~iv~Fr~~p~~~~~~l~~~~~~ 452 (522)
T TIGR03799 375 LEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTE--PELCLLTYRYVPEEVQQALAKADEE 452 (522)
T ss_pred eecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecC--CCccEEEEEEeChhhcccccccchh
Confidence 2222 11122355667766553 4577778888888888876533333221 1122444444322110000
Q ss_pred -CCC----ccchHHHHHHHHHHCCcEEEee---------C---CEEEEeC-CCCCCHHHHHHHHHH
Q 010250 448 -FPP----EWGIGAYFGAQCEKHGMLVRVS---------G---DNIMMSP-PFIMSPEEVDELISK 495 (514)
Q Consensus 448 -~~~----~~~~~~~~~~~l~~~Gv~~~~~---------g---~~iRi~p-~~~~t~e~id~~~~~ 495 (514)
... ...+...+.+++.+.|...... | ..+|++. ....|+++|+.+++.
T Consensus 453 ~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 453 QREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence 000 1123456777778888665421 1 2488864 234688888887653
No 321
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.41 E-value=3.7e-12 Score=115.01 Aligned_cols=166 Identities=21% Similarity=0.313 Sum_probs=110.6
Q ss_pred HHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCC
Q 010250 147 LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDL 226 (514)
Q Consensus 147 ~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~ 226 (514)
.++.+++++++. .+.+++++++||++|++.+++.++ ..+++|++.++.|++.........+...
T Consensus 3 ~~~~~~l~~~~~-~~~~~~~~~~~~t~a~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~~~~~~g~~~------- 66 (170)
T cd01494 3 EELEEKLARLLQ-PGNDKAVFVPSGTGANEAALLALL--------GPGDEVIVDANGHGSRYWVAAELAGAKP------- 66 (170)
T ss_pred HHHHHHHHHHcC-CCCCcEEEeCCcHHHHHHHHHHhC--------CCCCEEEEeecccceehhhHHHhcCCEE-------
Confidence 577888998884 456789999999999999999874 2356899999998887521112222111
Q ss_pred CCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCC
Q 010250 227 PAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDI 306 (514)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gi 306 (514)
..++.+.. . ....+.+.+++ .....+++++++++.++++|...+ +++|.++|+++|+
T Consensus 67 -----~~v~~~~~------~-----~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~g~~~~----~~~l~~~~~~~~~ 123 (170)
T cd01494 67 -----VPVPVDDA------G-----YGGLDVAILEE---LKAKPNVALIVITPNTTSGGVLVP----LKEIRKIAKEYGI 123 (170)
T ss_pred -----EEeccCCC------C-----ccchhhhhhhh---ccccCceEEEEEecCcCCCCeEcC----HHHHHHHHHHcCC
Confidence 11111100 0 00000112222 222467899999999999988876 6999999999999
Q ss_pred EEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeEEeC
Q 010250 307 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILVS 355 (514)
Q Consensus 307 llI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~~ 355 (514)
++|+||++.++...... .......+|+++.| |.+++ .++|+++++
T Consensus 124 ~li~D~a~~~~~~~~~~--~~~~~~~~d~~~~s~~K~~~~--~~~G~l~~~ 170 (170)
T cd01494 124 LLLVDAASAGGASPAPG--VLIPEGGADVVTFSLHKNLGG--EGGGVVIVK 170 (170)
T ss_pred EEEEecccccccccccc--cccccccCCEEEEEcccccCC--CceEEEEeC
Confidence 99999999976443322 12223458998777 99987 578888764
No 322
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.40 E-value=2.4e-11 Score=125.33 Aligned_cols=231 Identities=16% Similarity=0.141 Sum_probs=134.6
Q ss_pred chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee---ecCCCccc
Q 010250 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA---SLSGLPAL 220 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~---~~s~~~~~ 220 (514)
+...+++++|+++.+ .+..+.++||+.|+..++. .+ ..+++||+.++.|++...... ...|..
T Consensus 54 p~~~~le~~lA~l~g---~~~~v~~~sG~~ai~~~l~-~l--------~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~-- 119 (390)
T PRK08064 54 PTREALEDIIAELEG---GTKGFAFASGMAAISTAFL-LL--------SKGDHVLISEDVYGGTYRMITEVLSRFGIE-- 119 (390)
T ss_pred hhHHHHHHHHHHHhC---CCCeEEECCHHHHHHHHHH-Hh--------CCCCEEEEccCccchHHHHHHHHHHHcCCE--
Confidence 456788999999874 2356777999999988885 32 235689999988876431111 111111
Q ss_pred cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHH
Q 010250 221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV 300 (514)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l 300 (514)
+..++.. +.+++++.+. +++.+|++|...+..|.+.+ +++|.++
T Consensus 120 ----------v~~v~~~------------------d~~~l~~~l~----~~tklV~l~~p~NptG~~~d----l~~I~~l 163 (390)
T PRK08064 120 ----------HTFVDMT------------------NLEEVAQNIK----PNTKLFYVETPSNPLLKVTD----IRGVVKL 163 (390)
T ss_pred ----------EEEECCC------------------CHHHHHHhcC----CCceEEEEECCCCCCcEecc----HHHHHHH
Confidence 0111110 1355665553 35678888988888888876 9999999
Q ss_pred HHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCc-ccceeEEe-CHHHHHHhhhccCCCCcccccC
Q 010250 301 VKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAY-MPIGAILV-SPEVSEVIHSQSNTLGSFSHGF 376 (514)
Q Consensus 301 ~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~-~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~ 376 (514)
|+++|+++|+||+|..+ .... ......|+++ ++|.++|.. .-.|++++ ++++.+.+... ....
T Consensus 164 a~~~g~~vvvD~a~~~~-~~~~-----~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~-------~~~~ 230 (390)
T PRK08064 164 AKAIGCLTFVDNTFLTP-LLQK-----PLDLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFL-------QNSF 230 (390)
T ss_pred HHHcCCEEEEECCCCcc-cccC-----chhhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHH-------HHhc
Confidence 99999999999998632 1111 1122357765 569887621 22455555 46787777631 2222
Q ss_pred CCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEc
Q 010250 377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFA 439 (514)
Q Consensus 377 t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~ 439 (514)
....+|..+..++..++.+. ...++..++...+.+.|++.. .+|... ...|.|.++.|++.
T Consensus 231 g~~~~~~~a~l~~~gl~tl~--~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~ 306 (390)
T PRK08064 231 GAVLGVQDCWLVLRGLKTLH--VRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ 306 (390)
T ss_pred CCCCCHHHHHHHHcccCcHH--HHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEEC
Confidence 33445555555444444322 123334444444555554321 112111 23467889999985
No 323
>PLN02590 probable tyrosine decarboxylase
Probab=99.40 E-value=2.5e-10 Score=120.90 Aligned_cols=327 Identities=12% Similarity=0.080 Sum_probs=182.4
Q ss_pred chHHHHHHHHHHhcCcCCC------CeEEEeCChhHHHHHHHHHHHHHHhhc-CCCC-ccEEEEEecCCcccceeeeecC
Q 010250 144 KPSLDLAKELLEMFTASKM------AKVFFTNSGSEANDTQVKLVWYYNNAL-GRPN-KKKFIARQKSYHGSTLIAASLS 215 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~~~~------~~v~~~~sGseA~~~Alk~a~~~~~~~-~~~~-~~~ii~~~~~yHG~t~~~~~~s 215 (514)
....++.++|+++++...- .--+|+++|||||..|+.+||....+. +..+ .+-+++.+..-|-+...++.+.
T Consensus 170 ~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~il 249 (539)
T PLN02590 170 ELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIG 249 (539)
T ss_pred HHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHc
Confidence 3444555666666632210 236889999999999999998654321 1111 1235555666676655555444
Q ss_pred CCccccCCCCCCCCcccccCCC--CcccCCCCCCChhHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCCh
Q 010250 216 GLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPA 291 (514)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~ 291 (514)
|... ..+..++++ +.++ .+.+.|++.|.+. ....+.+|+..--....|.+-|
T Consensus 250 Glg~---------~~vr~Vp~d~~~~~~-------------md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp-- 305 (539)
T PLN02590 250 GIHE---------ENIRLLKTDSSTNYG-------------MPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP-- 305 (539)
T ss_pred CCCc---------ccEEEEeCCCCCCCc-------------CCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC--
Confidence 4321 112223322 1112 2257888877642 1223455555555556688877
Q ss_pred hHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCC-Cchhch--hhhhcCCcccceeEEeCHH--HHHHhhhcc
Q 010250 292 TYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK-PDLVSF--AKALSSAYMPIGAILVSPE--VSEVIHSQS 366 (514)
Q Consensus 292 ~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~-pDiv~~--sK~l~gG~~pig~v~~~~~--i~~~l~~~~ 366 (514)
|++|.++|++||++|++|-++.|+...-..+..-..|+. .|-+++ -|.+.-. ++.|++++++. +.+.+....
T Consensus 306 --l~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p-~~cg~llvr~~~~l~~a~~~~~ 382 (539)
T PLN02590 306 --LVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFAN-QTCSPLWVKDRYSLIDALKTNP 382 (539)
T ss_pred --HHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcC-cCEEEEEecCHHHHHHHhhcCH
Confidence 999999999999999999999887432211111123553 676665 4888777 68888888753 333332111
Q ss_pred CCCCc----------ccc-cCCCCCcHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHhhhhhccCCCceeEEEeeee
Q 010250 367 NTLGS----------FSH-GFTYSGHPVSCAVAIEALKIYKERNI---VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGL 432 (514)
Q Consensus 367 ~~~~~----------~~~-~~t~~~~pl~~aaa~aal~~~~~~~~---~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~ 432 (514)
.+... +.+ +... +-.........+|+.+-.+++ +++.-+++++|.+.|++..+..++.. ..-.
T Consensus 383 ~YL~~~~~~~~~~~d~~d~~i~l-sRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~--~~l~ 459 (539)
T PLN02590 383 EYLEFKVSKKDTVVNYKDWQISL-SRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTT--RYFS 459 (539)
T ss_pred HHhCCcccccccCCCccccCCCC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CceE
Confidence 00000 000 0111 123444555566776655554 55566677888888876533333222 1222
Q ss_pred eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----CC-EEEEeC-CCCCCHHHHHHHHHHHHHHHHHH
Q 010250 433 ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----GD-NIMMSP-PFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 433 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----g~-~iRi~p-~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
++.|.+....... .........+.+++.+.|.+.... |. .||++. ....+++||+.+++.|.+...++
T Consensus 460 iVcFr~~~~~~~~---~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~ 533 (539)
T PLN02590 460 LVCFRLAPVDGDE---DQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKF 533 (539)
T ss_pred EEEEEecCCCCCH---HHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3444443211100 001123566778888888665422 33 489874 24578999999999998886654
No 324
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.39 E-value=4.3e-11 Score=123.69 Aligned_cols=304 Identities=16% Similarity=0.166 Sum_probs=167.7
Q ss_pred chHHHHHHHHHHhcCcCCCCeEEEeCChh-HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 144 KPSLDLAKELLEMFTASKMAKVFFTNSGS-EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGs-eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
....++++.+++.++-..++.++++++|| .++..++..++.. .++.+.||+.... |-++..++...|.....
T Consensus 105 ~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~-----~~~gd~VI~p~~t-h~S~~kAi~~~G~~pv~- 177 (444)
T TIGR03531 105 KLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHK-----RPKAKYVIWPRID-QKSCIKAISTAGFEPRV- 177 (444)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCc-----CCCCCEEEEECcC-hHHHHHHHHHcCCeEEE-
Confidence 34456777777777433344799999999 6888777665311 1234567777766 66665555555432111
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
+.....++.|+ .++++|++.|....++.+.+|+..|..+..|...+ +++|.++|+
T Consensus 178 --------Vd~~~d~~~~~-------------iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~dd----L~eIa~la~ 232 (444)
T TIGR03531 178 --------IETVLDGDELT-------------TDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDD----IEEIAKICA 232 (444)
T ss_pred --------eeeeecCcCCC-------------cCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhC----HHHHHHHHH
Confidence 00000011111 12688999887544356777777776444444444 999999999
Q ss_pred hcCCEEEEechhcCccccccccee--cccCC-CCchhch--hhhhcCCcccceeEEe-CHHHHHHhhhccCCCCcccccC
Q 010250 303 KYDILFIADEVICAFGRLGTMFGC--DKYSI-KPDLVSF--AKALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGF 376 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~~~~~--~~~gv-~pDiv~~--sK~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~ 376 (514)
+||+++|+|++|. ++-. ..... ..... ..|++++ .|.+...+ .-|++++ ++++++.+... ..+
T Consensus 233 k~gI~lIvDaAyg-~~~~-~~~~~~~~g~~~Grad~vv~s~hK~l~~pg-~Gg~I~~~d~el~~~i~~~-------y~g- 301 (444)
T TIGR03531 233 NYDIPHIVNNAYG-LQSN-KYMELINKAIKVGRVDAVVSSTDKNFMVPV-GGAIIYSFDENFIQEISKS-------YPG- 301 (444)
T ss_pred HcCCEEEEECcCc-CcCh-hhhhhhhccccccCCCeEEEeCccCCCCCC-CEEEEEECCHHHHHHHHHh-------ccC-
Confidence 9999999999996 3111 00000 11112 2477765 48776421 2345556 67888777631 111
Q ss_pred CCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHhhhhhcc-CCCc-eeEEEeeeeeEEEEEccCCCCCCCCCCcc
Q 010250 377 TYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDGVKAFS-DSPI-IGEIRGTGLILGTEFADNKSPNEPFPPEW 452 (514)
Q Consensus 377 t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~-~~~~-~~~v~g~g~~~~i~~~~~~~~~~~~~~~~ 452 (514)
.....| +..+....+..-.+ +++.++..++.+++.+.|+++. ++.. +.+++....-+++.+..-. ..
T Consensus 302 ~~~~s~-~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~-~~------- 372 (444)
T TIGR03531 302 RASASP-SLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK-GK------- 372 (444)
T ss_pred CCCChH-HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc-cc-------
Confidence 112222 33333333322111 3567778888889999998872 3321 2222222222333333211 00
Q ss_pred chHHHHHHHHHHCCcE----EEee------C---------------CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 453 GIGAYFGAQCEKHGML----VRVS------G---------------DNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 453 ~~~~~~~~~l~~~Gv~----~~~~------g---------------~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
....+...|..++|- +.+. | ..+-++....++++|||.++++|++++
T Consensus 373 -~~~~~g~~l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 373 -DPTMLGSMLYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred -CHHHHHHHHHhCCCCCceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 134566777777652 1111 0 123444456789999999999998763
No 325
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.39 E-value=4.9e-11 Score=110.64 Aligned_cols=312 Identities=21% Similarity=0.274 Sum_probs=193.6
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 221 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~ 221 (514)
..++..++-+.|++++ ++|.+.++++.-||-.+++.... ++.+.++.++.-|=.+..+.-..|....
T Consensus 59 ~kPpI~~F~~dlaeFl---g~D~~R~t~GARe~KfavMhal~---------~~gd~vV~D~~aHYttyvAAEragl~v~- 125 (382)
T COG1103 59 TKPPIKDFLEDLAEFL---GMDEVRVTAGAREAKFAVMHALC---------KEGDWVVVDSLAHYTTYVAAERAGLNVA- 125 (382)
T ss_pred cCCcHHHHHHHHHHHh---CCceeeecccchhhHHHHHHHhc---------cCCCEEEEcCcchHHHHHHHHhcCCeEE-
Confidence 3466778888899987 78899999999998887776553 4567889999999887766654443321
Q ss_pred CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250 222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 301 (514)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~ 301 (514)
.+++..+|.+ ..+.+.| .+-+|+...+ +.+.++..++..+-|+.|.+.. -+++.++|
T Consensus 126 --------eVp~tg~Pey------~i~~e~y----~~viee~~~~-~g~~~~lallTh~Dg~YGNl~D----akkva~ic 182 (382)
T COG1103 126 --------EVPNTGYPEY------KITPEGY----AEVIEEVKDE-GGDPPALALLTHVDGEYGNLAD----AKKVAKIC 182 (382)
T ss_pred --------ecCCCCCCce------EecHHHH----HHHHHHHHhc-cCCCceEEEEeccCCCcCCchh----hHHHHHHH
Confidence 1223333332 1122333 3445555443 3355778888888899998877 79999999
Q ss_pred HhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCC-C--Cc-cccc
Q 010250 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNT-L--GS-FSHG 375 (514)
Q Consensus 302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~-~--~~-~~~~ 375 (514)
++||+.++..-+|| .||. ......+.+|.++-| |+|+.. .|+|.+..+.++.+..-+.+.. . .- -..|
T Consensus 183 ~e~gvPlllN~AYt-~Grm----pvs~ke~g~DFiVgSGHKsmAAs-~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellG 256 (382)
T COG1103 183 REYGVPLLLNCAYT-VGRM----PVSGKEIGADFIVGSGHKSMAAS-APIGVLAMSEEWAEIVLRRSGRAFPKKEVELLG 256 (382)
T ss_pred HHcCCceEeeccee-eccc----cccccccCCCEEEecCccchhcc-CCeeEEeehhHHHHHHHhhcccccccceeeeec
Confidence 99999999999998 7776 445566789988766 888876 6999999999998877554311 1 11 1234
Q ss_pred CCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccc
Q 010250 376 FTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWG 453 (514)
Q Consensus 376 ~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~ 453 (514)
.|..+-|+....| .+-...+ .++.+.+ +..++|.+.|.++......+.-+-..-++.|+-+.- ..-......
T Consensus 257 CT~rGapivTlmA--SfP~V~eRVkrWdeEv-~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f---~eIakk~~r 330 (382)
T COG1103 257 CTVRGAPIVTLMA--SFPHVVERVKRWDEEV-EKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVF---HEIAKKHKR 330 (382)
T ss_pred ccccCchHHHHHh--cCHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchH---HHHHHhCcC
Confidence 5555555533222 2221111 2333333 345667777766521111110000111122221100 000001111
Q ss_pred hHHHHHHHHHHCCcEEEeeC--CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 454 IGAYFGAQCEKHGMLVRVSG--DNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 454 ~~~~~~~~l~~~Gv~~~~~g--~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
..-.+.+.|.++||.-...| ..+.++. +..+.|+++..++++++.+++
T Consensus 331 ~gyFlY~ELK~RgI~GI~~G~Tk~~K~sv-yGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 331 KGYFLYEELKKRGIHGIQPGQTKYFKLSV-YGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred CceeeHHHHHhcCccccccCceeEEEEEe-ecCCHHHHHHHHHHHHHHHHh
Confidence 23447789999998865555 3578775 678999999999999998865
No 326
>PLN02263 serine decarboxylase
Probab=99.38 E-value=5e-10 Score=115.74 Aligned_cols=295 Identities=14% Similarity=0.081 Sum_probs=174.1
Q ss_pred CchHHHHHHHHHHhcCcCC-CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250 143 TKPSLDLAKELLEMFTASK-MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 221 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~-~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~ 221 (514)
.+...++-+.++++++... --.-+++++|||||..|+.+||.+. .+.+++++..-|-+..-+..+-|...
T Consensus 132 ~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~-------~~~vvy~S~~aH~Sv~KAa~llgi~~-- 202 (470)
T PLN02263 132 RQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVF-------PDGILYASRESHYSVFKAARMYRMEC-- 202 (470)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhc-------CCcEEEEcCCccHHHHHHHHhcCCcc--
Confidence 3444556666677664221 1146889999999999999998652 12367777777776555544444321
Q ss_pred CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250 222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 301 (514)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~ 301 (514)
..++....++ .+.++|++.|.+.. ..+.+|+..-.....|.+-| +++|.++|
T Consensus 203 ----------~~Vp~d~~g~-------------mD~~aL~~aI~~d~-~~P~iVvataGTT~~GAiDp----i~eIa~i~ 254 (470)
T PLN02263 203 ----------VKVDTLVSGE-------------IDCADFKAKLLANK-DKPAIINVNIGTTVKGAVDD----LDLVIKTL 254 (470)
T ss_pred ----------eEeccCCCCc-------------CcHHHHHHHHHhCC-CCcEEEEEEecCCCCcCCCC----HHHHHHHH
Confidence 2222222212 23688888876533 23555555555555688877 99999999
Q ss_pred HhcCC-----EEEEechhcCccccccccee--cccC--CCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCC
Q 010250 302 KKYDI-----LFIADEVICAFGRLGTMFGC--DKYS--IKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLG 370 (514)
Q Consensus 302 ~~~gi-----llI~DEv~tG~gr~G~~~~~--~~~g--v~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~ 370 (514)
++||+ +|++|-++.|+-- .|.- ..+. ...|-+++. |.+... ++.|+++.+++.++.+.....+..
T Consensus 255 ~~~g~~~~~iwlHVDAA~GG~~l---Pf~~~~~~~df~~~vDSIsvD~HK~l~~P-~~cgvll~R~~~~~~~~~~~~Yl~ 330 (470)
T PLN02263 255 EECGFSQDRFYIHCDGALFGLMM---PFVKRAPKVTFKKPIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNVEYLA 330 (470)
T ss_pred HHcCCccCCeeEEEeccchhhHh---hhcccccccCCCcCccEEEECCccccCCC-cCEEEEEEehhhHhhhccChHhhC
Confidence 99997 9999999988621 1110 1111 124545544 887777 789999999776655533211111
Q ss_pred cccccCCCCCc--HHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCC
Q 010250 371 SFSHGFTYSGH--PVSCAVAIEALKIYKERNI---VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPN 445 (514)
Q Consensus 371 ~~~~~~t~~~~--pl~~aaa~aal~~~~~~~~---~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~ 445 (514)
. ...|..++ ....+....+|+.+..+++ .++.-++.+++.+.|++. ++..-.....+.+.+ ..+.
T Consensus 331 ~--~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~---g~~~~~~p~s~~V~f--~~p~--- 400 (470)
T PLN02263 331 S--RDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREA---GISAMLNELSSTVVF--ERPK--- 400 (470)
T ss_pred C--CCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC---CCeEEeCCCceEEEE--ecCc---
Confidence 1 01122222 2234455666776655554 555666778888888775 222122223333333 2211
Q ss_pred CCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 446 EPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 446 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
..+..+|..+...++.+++.....++++.||++++-|++....
T Consensus 401 --------------~~~~~~gW~L~~~~~~~Hivvmphv~~~~id~fi~DL~~~~~~ 443 (470)
T PLN02263 401 --------------DEEFVRRWQLACQGNIAHVVVMPSVTIEKLDYFLKELVEKRST 443 (470)
T ss_pred --------------hHHhhcceEEccCCCcEEEEEcCCCCHHHHHHHHHHHHHHHhh
Confidence 1123457666665666777766667899999999999887663
No 327
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.38 E-value=1.8e-11 Score=125.26 Aligned_cols=237 Identities=11% Similarity=0.075 Sum_probs=139.9
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
++....|+++|+++-. -+..++++||++|+..++.... ..+++||+.++.|.++........ +
T Consensus 63 nPt~~~Le~~la~le~---~~~~v~~sSG~aAi~~~l~all--------~~GD~Vlv~~~~Y~~~~~l~~~~l------~ 125 (395)
T PRK05967 63 TPTTDALCKAIDALEG---SAGTILVPSGLAAVTVPFLGFL--------SPGDHALIVDSVYYPTRHFCDTML------K 125 (395)
T ss_pred ChHHHHHHHHHHHHhC---CCCEEEECcHHHHHHHHHHHhc--------CCCCEEEEccCCcHHHHHHHHHHH------H
Confidence 4556778899988742 2346777779999999986553 345789999999987642110000 0
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
.++. .+..++.. +.+.+++++. +++.+|++|.+.++.+.+.+ +++|.++|+
T Consensus 126 ~~Gi---~v~~vd~~------------------~~e~l~~al~----~~TklV~lesPsNP~l~v~d----l~~I~~la~ 176 (395)
T PRK05967 126 RLGV---EVEYYDPE------------------IGAGIAKLMR----PNTKVVHTEAPGSNTFEMQD----IPAIAEAAH 176 (395)
T ss_pred hcCe---EEEEeCCC------------------CHHHHHHhcC----cCceEEEEECCCCCCCcHHH----HHHHHHHHH
Confidence 0110 01111100 0145666664 45788999977777776665 999999999
Q ss_pred hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcC-CcccceeEEeCHHHHHHhhhccCCCCcccccCCCC
Q 010250 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSS-AYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~g-G~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~ 379 (514)
++|+++|+|+++... ..+.......|+++ ..|.++| |-.-.|+++.++++.+.+... ....| ..
T Consensus 177 ~~g~~vvVD~t~a~p------~~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~-----~~~~G--~~ 243 (395)
T PRK05967 177 RHGAIVMMDNTWATP------LYFRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEA-----HGTLG--LC 243 (395)
T ss_pred HhCCEEEEECCccCc------eecChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHH-----HHHcC--CC
Confidence 999999999998732 12233334467764 6698887 324456666777766655421 00112 23
Q ss_pred CcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEcc
Q 010250 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD 440 (514)
Q Consensus 380 ~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~ 440 (514)
.+|..|...+..|+.+.- ..++..+++..+.+.|++.+ .+|... ...|.|.++.|++..
T Consensus 244 ~~p~da~l~~rgl~Tl~l--R~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~ 317 (395)
T PRK05967 244 AGPDDTYQILRGLRTMGI--RLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAA 317 (395)
T ss_pred CCHHHHHHHHcCcccHHH--HHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcC
Confidence 567776666655554432 13344444444555554321 122211 134678899999963
No 328
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.38 E-value=1.6e-11 Score=125.94 Aligned_cols=168 Identities=15% Similarity=0.129 Sum_probs=104.7
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
.+...+|+++++++.+ .+.+++++||+.|+.+++.+. ..+++||+.++.|++......... .
T Consensus 49 ~p~~~~Le~~la~l~g---~~~al~~~SG~~Al~~~l~~l---------~pGd~Vi~~~~~y~~t~~~~~~~~------~ 110 (380)
T PRK06176 49 NPTRFALEELIADLEG---GVKGFAFASGLAGIHAVFSLF---------QSGDHVLLGDDVYGGTFRLFDKVL------V 110 (380)
T ss_pred ChhHHHHHHHHHHHhC---CCCEEEECCHHHHHHHHHHHc---------CCCCEEEEcCCChhHHHHHHHHHH------H
Confidence 3446789999999863 356788899999998666432 234689898888866531110000 0
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
.++.. +..++.. +.+++++.+. +++.+|++|...+..|.+.+ +++|.++|+
T Consensus 111 ~~gi~---v~~vd~~------------------d~e~l~~ai~----~~t~lV~lesP~Nptg~~~d----i~~I~~la~ 161 (380)
T PRK06176 111 KNGLS---CTIIDTS------------------DLSQIKKAIK----PNTKALYLETPSNPLLKITD----LAQCASVAK 161 (380)
T ss_pred hcCeE---EEEcCCC------------------CHHHHHHhcC----cCceEEEEECCCCCCceecC----HHHHHHHHH
Confidence 01100 0001100 1456666553 35788888888888888776 999999999
Q ss_pred hcCCEEEEechhcCcccccccceecccCCCCchhch--hhhhcCCccc-ceeEEeC-HHHHHHhh
Q 010250 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSAYMP-IGAILVS-PEVSEVIH 363 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~--sK~l~gG~~p-ig~v~~~-~~i~~~l~ 363 (514)
+||+++|+|++++.. ..+.. .+...|++++ +|.++|..-. .|+++++ +++.+.+.
T Consensus 162 ~~gi~vivD~t~a~~-~~~~p-----~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~ 220 (380)
T PRK06176 162 DHGLLTIVDNTFATP-YYQNP-----LLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIA 220 (380)
T ss_pred HcCCEEEEECCcccc-ccCCc-----cccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHH
Confidence 999999999998732 22221 2334688765 4999873222 3445664 45655554
No 329
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.37 E-value=3.6e-10 Score=115.81 Aligned_cols=348 Identities=16% Similarity=0.162 Sum_probs=179.7
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ 178 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A 178 (514)
...|||+.|-.++ +...++....+..+.-. ++ -.+...+|++.+++++ +.+.+++++||+.|+..+
T Consensus 44 ~~v~IDLlSDS~T-------~aMs~~q~a~~~vGDd~---Ya-gd~s~~~LE~~vAe~l---G~e~aV~v~sGTaAl~ll 109 (460)
T PRK13237 44 EDVYIDLLTDSGT-------NAMSDRQWAGMMIGDEA---YA-GSRNFYHLEETVQEYY---GFKHVVPTHQGRGAENLL 109 (460)
T ss_pred CcEEEECcccCCc-------hhccHHHHHHHhhcchh---hc-CCCcHHHHHHHHHHHH---CCCeEEEeCCHHHHHHHH
Confidence 4578999988765 33344433333222111 11 2234578999999998 567899999999999975
Q ss_pred HHHHHHHHhhcCCCCccEEEEEecCCcccceee-eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250 179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA-ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257 (514)
Q Consensus 179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
..+. ..++ ++| .+.+|-.+..+ +...|.. +. +...+.......++.+. ...++
T Consensus 110 ~~l~-------v~pG--d~V--p~n~~f~Tt~ahI~~~Ga~-fv---Di~~d~a~~~~~~~p~t-----------gnlD~ 163 (460)
T PRK13237 110 SRIA-------IKPG--QYV--PGNMYFTTTRYHQELNGGI-FV---DIIIDEAHDAQSDHPFK-----------GNVDL 163 (460)
T ss_pred HHhC-------CCCc--CEE--CCccchHhhHHHHHhCCcE-EE---eeecccccccccCCCCC-----------CCcCH
Confidence 3321 1122 333 44444443222 2222210 00 00000000000011111 12236
Q ss_pred HHHHHHHHHhCCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc-----------cccccce
Q 010250 258 NNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG-----------RLGTMFG 325 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEp-v~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g-----------r~G~~~~ 325 (514)
+.|+++|...++.+++.+.++- ++..|| .+.+.+.+++|+++|++||+.||.|-++. +| ..|+...
T Consensus 164 d~Le~~I~~~~~~~~~lV~a~itvn~~GG-qpvs~~~m~~I~elA~~~Gl~Vi~DaAra-~gna~fI~~re~~y~~~~i~ 241 (460)
T PRK13237 164 DKLQALIDEVGAENIAYICLAVTVNLAGG-QPVSMANMRAVRELCDKHGIKVFFDATRC-VENAYFIKEREEGYQDKSIK 241 (460)
T ss_pred HHHHHHhccccCCccCceEEEEecccCCC-eeCCHHhHHHHHHHHHHcCCEEEEECcch-hcChhhhcccccccCCCcHh
Confidence 8889988755444555444443 444445 44555779999999999999999999986 43 1111100
Q ss_pred --ecccCCCCchhchh--hhhcCCcccc-eeEEe-CHHHHHHhhhccCCCCcccccCCCCCcHH-HHHHHHHHHHHHhhc
Q 010250 326 --CDKYSIKPDLVSFA--KALSSAYMPI-GAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPV-SCAVAIEALKIYKER 398 (514)
Q Consensus 326 --~~~~gv~pDiv~~s--K~l~gG~~pi-g~v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl-~~aaa~aal~~~~~~ 398 (514)
.....--.|+++|| |.++. ++ |+++. ++++.+.++... -.+...-||++-.- -+.+....|+...++
T Consensus 242 ei~~e~~s~aD~~t~S~~K~~~~---~~GG~i~t~D~eL~~~~r~~~---~~~eG~~tygg~~grd~~alAvgl~E~~~~ 315 (460)
T PRK13237 242 EIVHEMFSYADGCTMSGKKDCLV---NIGGFLAMNDEELFDEAKELV---VVYEGMPSYGGMAGRDMEAMAIGIEESVQY 315 (460)
T ss_pred HHhhhccCcCcEEEEeCCCCCCC---CCceEEEECCHHHHHHHHHhc---cccCCCcCCCChhhhHHHHHHhHHHhhchH
Confidence 00011125777766 65553 34 45555 567777776421 01122235554211 111111134333334
Q ss_pred cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEcc--CCCCCCCCCCccchHHHHHHHH-HHCCcEEE-----
Q 010250 399 NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFAD--NKSPNEPFPPEWGIGAYFGAQC-EKHGMLVR----- 470 (514)
Q Consensus 399 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~----- 470 (514)
+..++.-...++|.+.|++. +.|++....| .-+.++... +..+...|+ +..++..| ++-||-..
T Consensus 316 ~y~~~ri~~~~~l~~~L~~~-Gvpv~~p~gg--H~v~vda~~~lph~~~~~~p-----~~al~~~ly~~~GiR~~e~g~~ 387 (460)
T PRK13237 316 EYIEHRVGQVRYLGEKLLAA-GVPIVEPVGG--HAVFLDARRFLPHLPQDQFP-----AQALAAELYIESGVRSMERGIV 387 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCceecCCCc--eEEEEEhHHhCCCCCcccCh-----HHHHHHHHHHHhCcCeEeecce
Confidence 56666666778888888764 5566654433 323333221 111111122 33344444 34454332
Q ss_pred -----ee-C-------CEEEEeCCC-CCCHHHHHHHHHHHHHHHHH
Q 010250 471 -----VS-G-------DNIMMSPPF-IMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 471 -----~~-g-------~~iRi~p~~-~~t~e~id~~~~~l~~~l~~ 502 (514)
+. + +-+|++.|- .-|.+++|...++|.+..++
T Consensus 388 ~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 388 SAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred ecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 11 1 348998884 45999999999988877654
No 330
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.37 E-value=2.4e-10 Score=116.75 Aligned_cols=348 Identities=15% Similarity=0.155 Sum_probs=182.3
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ 178 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A 178 (514)
...|||+.|-.++ +.+.++-...+..+.-. |. -.+...+|++.+++++ +.+.+++++||+.|...+
T Consensus 37 ~~v~iDLltDsgT-------~aMs~~q~a~~~~GDe~---ya-g~~s~~~lE~~va~~~---G~~~av~v~sGT~Al~ll 102 (450)
T TIGR02618 37 EDVYIDLLTDSGT-------NAMSDKQWAGLMMGDEA---YA-GSRNFYHLERTVRELY---GFKYVVPTHQGRGAENLL 102 (450)
T ss_pred CceEEEcccCCCc-------HHHHHHHHHHhhhcchh---hc-CCCcHHHHHHHHHHHH---CCCeEEEcCCHHHHHHHH
Confidence 3578999987654 55555522222222111 11 2344678999999998 567899999999997764
Q ss_pred HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCC--cccccCCCCcccCCCCCCChhHHHHHH
Q 010250 179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAP--FVLHTDCPHYWRYAHPGETEEEYSTRL 256 (514)
Q Consensus 179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (514)
. .+. .+++ + .| ..+.|.-.+...+...|.. .. +.+.. .-...+ +.|+ ...+
T Consensus 103 ~-~l~------l~pG-D-eV-psn~~f~Tt~ahIe~~Gav-~v---Di~~dea~~~~~~--~p~~-----------GniD 155 (450)
T TIGR02618 103 S-QIA------IKPG-D-YV-PGNMYFTTTRYHQEKNGAT-FV---DIIIDEAHDAQLN--IPFK-----------GNVD 155 (450)
T ss_pred H-HhC------CCCc-C-EE-CCceeHHHHHHHHHhCCeE-EE---eeecccccccccC--CCCC-----------CCcC
Confidence 3 221 1122 3 33 3333322222212222210 00 00000 000000 1111 1123
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce----ecccCC-
Q 010250 257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG----CDKYSI- 331 (514)
Q Consensus 257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~----~~~~gv- 331 (514)
++.|++.|...+...++.|.++-..+..|-.+.+.+.+++|+++|++||+.||.|-++. +|- + .+- -...+.
T Consensus 156 ~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~-~gN-A-~~I~~re~g~~~~~ 232 (450)
T TIGR02618 156 LKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRC-VEN-A-YFIKEREQGYEDKS 232 (450)
T ss_pred HHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccch-hhC-h-hhhhcccccccCCC
Confidence 68888888754333455555555444433355566789999999999999999999886 321 0 000 001111
Q ss_pred ----------CCchhchhhhhcCCcccceeEEe--CHHHHHHhhhccCCCCcccccCCCCCcHH-HHHHHHHHHHHHhhc
Q 010250 332 ----------KPDLVSFAKALSSAYMPIGAILV--SPEVSEVIHSQSNTLGSFSHGFTYSGHPV-SCAVAIEALKIYKER 398 (514)
Q Consensus 332 ----------~pDiv~~sK~l~gG~~pig~v~~--~~~i~~~l~~~~~~~~~~~~~~t~~~~pl-~~aaa~aal~~~~~~ 398 (514)
-.|. +++|+.-.++.|+|.+++ ++++++.++... ..+..--|+++-.- .+.+...+|+...+.
T Consensus 233 i~ei~~e~~~~aD~-~~~S~~Kd~~~~~GG~l~~~d~~l~~k~r~~~---~~~eG~~tyGgla~r~~~ala~gL~e~~~~ 308 (450)
T TIGR02618 233 IAEILKEMMSYADG-CTMSGKKDCLVNIGGFLCMNDDEMFQSAKELV---VVFEGMPSYGGLAGRDMEAMAIGIREAVDY 308 (450)
T ss_pred HHHHHHHHhccCcE-EEEeeccCCCCCCceEEEeCCHHHHHHHHHHh---hhcCCccccCchhhhhHHHHHHHHHHhhhH
Confidence 1344 444444333368787776 678888776421 01111124443121 222323345544444
Q ss_pred cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccC--CCCCCCCCCccchHHHHHHHH-HHCCcEEEe----
Q 010250 399 NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADN--KSPNEPFPPEWGIGAYFGAQC-EKHGMLVRV---- 471 (514)
Q Consensus 399 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~---- 471 (514)
...++.....++|.++|++. ..|++..+ .|..+.++...- ..+...|| +..++-.| ++-||-..-
T Consensus 309 ~y~~~r~~~a~~La~~L~~~-Gvpv~~p~--ggh~V~vda~~~lph~~~~~~p-----~~al~~~ly~~~gir~~e~g~~ 380 (450)
T TIGR02618 309 EYIEHRVKQVRYLGDKLKAA-GVPIVEPV--GGHAVFLDARRFLPHIPQDQFP-----AQSLAASIYVETGVRSMERGIV 380 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCcccCCC--CcceEEEEhHHhCCCCChhhCh-----HHHHHHHHHHHhCccEEeecce
Confidence 55666666788899999887 55664433 345555554331 11111122 33344444 344543321
Q ss_pred ------e--------CCEEEEeCCC-CCCHHHHHHHHHHHHHHHHH
Q 010250 472 ------S--------GDNIMMSPPF-IMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 472 ------~--------g~~iRi~p~~-~~t~e~id~~~~~l~~~l~~ 502 (514)
. -+-+|++.|- .-|.+++|...+++....++
T Consensus 381 ~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 381 SAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKH 426 (450)
T ss_pred ecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 0 0348998884 45999999999988877654
No 331
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.37 E-value=4e-10 Score=124.62 Aligned_cols=314 Identities=15% Similarity=0.143 Sum_probs=190.9
Q ss_pred CchHHHHHHHHHHhcCcCCCCeE-EEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250 143 TKPSLDLAKELLEMFTASKMAKV-FFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 221 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v-~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~ 221 (514)
.....++.+.|++++ +++.+ ++.++|+.|..+++.++|.|+..++..+| .++....+-||+...+....|...
T Consensus 529 lq~i~elq~~l~elt---Gmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R-~~vlip~saHgtnPasa~~~G~~V-- 602 (939)
T TIGR00461 529 QELIAQLEKWLCSIT---GFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHR-NICLIPVSAHGTNPASAAMAGMQV-- 602 (939)
T ss_pred HHHHHHHHHHHHHHH---CCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCC-CEEEEEccccCcCHHHHHHCCCEE--
Confidence 355668889999987 45544 45677888888899999998877776555 456667788887644433333211
Q ss_pred CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250 222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 301 (514)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~ 301 (514)
..+++.. .+..++++|++++.+.+ +++++|++.-.++ .|.+.++ +++|.++|
T Consensus 603 ----------v~V~~d~-------------~G~iDle~L~~~i~~~~-~~taaV~iT~pst-~G~~e~~---I~eI~~ia 654 (939)
T TIGR00461 603 ----------VPVNCDQ-------------DGNIDLVDLKNKAEQHG-DELAAVMVTYPST-HGVFEPT---IQHACDIV 654 (939)
T ss_pred ----------EEeccCC-------------CCCcCHHHHHHHHhhcC-CceEEEEEEeCCc-Cceeccc---HHHHHHHH
Confidence 1122211 11123688888886533 4677777755544 4777665 99999999
Q ss_pred HhcCCEEEEechhcC-cccccccceecccCCCCchhchh--hhhc----CCcccceeEEeCHHHHHHhhhccC-------
Q 010250 302 KKYDILFIADEVICA-FGRLGTMFGCDKYSIKPDLVSFA--KALS----SAYMPIGAILVSPEVSEVIHSQSN------- 367 (514)
Q Consensus 302 ~~~gillI~DEv~tG-~gr~G~~~~~~~~gv~pDiv~~s--K~l~----gG~~pig~v~~~~~i~~~l~~~~~------- 367 (514)
+++|.++++|-++.. .+ + ....-....|+++++ |.|+ +|+-.+|.+++++++...+..+.-
T Consensus 655 h~~G~~v~VDgAq~~al~--~---l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~ 729 (939)
T TIGR00461 655 HSFGGQVYLDGANMNAQV--G---LTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGI 729 (939)
T ss_pred HHcCCEEEEEecChhhCC--C---CCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCC
Confidence 999999999999862 21 1 111122346998774 8766 243568889999876655542110
Q ss_pred -CCCcc-cccCCCCCcHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHhhhhhccCCCceeEEEe-eee-e--EEEEE
Q 010250 368 -TLGSF-SHGFTYSGHPVSCAVAIEALKIYKERNI---VEQVNKIAPKFQDGVKAFSDSPIIGEIRG-TGL-I--LGTEF 438 (514)
Q Consensus 368 -~~~~~-~~~~t~~~~pl~~aaa~aal~~~~~~~~---~~~~~~~~~~l~~~L~~l~~~~~~~~v~g-~g~-~--~~i~~ 438 (514)
..... .......++.+.+..+...|..+-.+++ .+..-.+.+++.++|++. .++.. .+ .+. + +.+++
T Consensus 730 greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~--~~~l~--~~~~~~~~hEfv~~~ 805 (939)
T TIGR00461 730 GGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH--YPILF--VGTLKHVAHECILDL 805 (939)
T ss_pred CCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc--Ccccc--cCCCCceeEEEEEec
Confidence 00000 0111234455555666666777666554 344556778888888763 12211 11 111 1 22333
Q ss_pred ccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 439 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----GDNIMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
...+. ........+.++|++.|+..... .+.+.+.|.-..|++|||++++++.+..+++.+
T Consensus 806 ~~~~~------~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 806 RPLKA------KTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred cchhh------hcCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHH
Confidence 21100 00012567899999999886432 246778887899999999999999877766554
No 332
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.37 E-value=6.6e-11 Score=120.71 Aligned_cols=322 Identities=12% Similarity=0.036 Sum_probs=174.7
Q ss_pred CCHHHHHHHHHHHhcCCcccc----ccc---cCCchHHHHHHHHHHhcCcCCCCeEEEeCC-hhHHHHHHHHHHHHHHhh
Q 010250 117 SEPRLVAAATAQLNTLPFYHS----FWN---RTTKPSLDLAKELLEMFTASKMAKVFFTNS-GSEANDTQVKLVWYYNNA 188 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~~~~----~~~---~~~~~~~ela~~L~~~~~~~~~~~v~~~~s-GseA~~~Alk~a~~~~~~ 188 (514)
-++.|++|+.+.+......++ ... ...+...+..+++++++.....++|+|+++ ||+|++.++....
T Consensus 10 ~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~----- 84 (355)
T cd00611 10 LPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLL----- 84 (355)
T ss_pred CCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcC-----
Confidence 478999999998754211110 100 011445677888999886434567888866 9999999987652
Q ss_pred cCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC
Q 010250 189 LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG 268 (514)
Q Consensus 189 ~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~ 268 (514)
.+.++...|.. +.|.-+........|.. +..+++++... + +.. .+..+..+ .
T Consensus 85 -~~~~~~~~i~~-g~~~~~~~~~a~~~g~~------------~~~~~~~~~g~--~-~~~--------~~~~~~~~---~ 136 (355)
T cd00611 85 -GDKGTADYVVT-GAWSAKAAKEAKRYGGV------------VVIVAAKEEGK--Y-TKI--------PDVETWDL---A 136 (355)
T ss_pred -CCCCeEEEEEC-CHHHHHHHHHHHhcCCC------------cEEEecccccC--C-CCC--------CCHhhcCC---C
Confidence 00112233332 33321110000000100 11111111000 0 000 01111111 1
Q ss_pred CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCccc
Q 010250 269 PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMP 348 (514)
Q Consensus 269 ~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~p 348 (514)
+++..|.+-.+.+.+|++.+ ++++.||+++++|-+|+ +|.. ..-.+.+++ ++..--|.+ |. ..
T Consensus 137 -~~~~lV~~~h~~t~tG~~~~---------~i~~~~g~~~~VDa~qs-~g~~--~idv~~~~~--~~ss~~K~l-GP-~G 199 (355)
T cd00611 137 -PDAAYVHYCSNETIHGVEFD---------EVPDTGGVPLVADMSSN-ILSR--PIDVSKFGV--IYAGAQKNL-GP-AG 199 (355)
T ss_pred -CCCCEEEEeCCcccccEEcc---------eecccCCCeEEEEcccc-ccCC--CCCHHHhCE--EEeeccccc-CC-Cc
Confidence 35566777777677777632 45556999999999998 5432 222233332 221123866 34 45
Q ss_pred ceeEEeCHHHHHHhhhccCCCCc----ccccCCC-CCcHHHHHHHHHHHHHHhhc-c---HHHHHHHHHHHHHhhhhhcc
Q 010250 349 IGAILVSPEVSEVIHSQSNTLGS----FSHGFTY-SGHPVSCAVAIEALKIYKER-N---IVEQVNKIAPKFQDGVKAFS 419 (514)
Q Consensus 349 ig~v~~~~~i~~~l~~~~~~~~~----~~~~~t~-~~~pl~~aaa~aal~~~~~~-~---~~~~~~~~~~~l~~~L~~l~ 419 (514)
+|++++++++.+.+.+....... .....++ ..|-.+..+..++|+.+.++ + +.++.+++.++++++|+++.
T Consensus 200 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~ 279 (355)
T cd00611 200 VTVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSN 279 (355)
T ss_pred eEEEEECHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCc
Confidence 89999999998776542110000 0111123 23344566666888888765 3 46778888889999888873
Q ss_pred CC-CceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---CCEEEEeCCCCCCHHHHHHHHH
Q 010250 420 DS-PIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GDNIMMSPPFIMSPEEVDELIS 494 (514)
Q Consensus 420 ~~-~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~~iRi~p~~~~t~e~id~~~~ 494 (514)
+. ....+.. ..+.++.|.+.+. .....+...+.++|+...+. .+.+|+++...+|+||||++++
T Consensus 280 gl~~~~~~~~~rs~~vvsf~~~~~-----------~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~ 348 (355)
T cd00611 280 GFYRGPVDKRARSRMNVPFRLGKE-----------ELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALAD 348 (355)
T ss_pred cccccCCCHHHcCceEEEEEcCCh-----------hhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHH
Confidence 32 1111111 1224466655432 01233445778899984433 2469999999999999999999
Q ss_pred HHHHH
Q 010250 495 KYGKA 499 (514)
Q Consensus 495 ~l~~~ 499 (514)
.|++.
T Consensus 349 al~~~ 353 (355)
T cd00611 349 FMKEF 353 (355)
T ss_pred HHHHH
Confidence 98874
No 333
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.37 E-value=4.4e-11 Score=124.51 Aligned_cols=159 Identities=17% Similarity=0.164 Sum_probs=104.3
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee-cCCCcccc
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS-LSGLPALH 221 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~-~s~~~~~~ 221 (514)
.+...+++++++++.+ -+.+++++||++|+..++...+ ..+++||+....|++....... +.
T Consensus 63 ~p~~~~le~~lA~l~g---~~~av~~sSGt~Al~~al~~ll--------~~Gd~Vi~~~~~y~~t~~~~~~~l~------ 125 (433)
T PRK08134 63 NPTVAVLEERVAALEG---GVGAIATASGQAALHLAIATLM--------GAGSHIVASSALYGGSHNLLHYTLR------ 125 (433)
T ss_pred ChHHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHHh--------CCCCEEEEeCCccHHHHHHHHHHHh------
Confidence 3557889999999874 3458999999999999987653 2346788888888764211100 00
Q ss_pred CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250 222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 301 (514)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~ 301 (514)
.++. .+..++.. +.+++++++. +++.+|++|.+.+..|.+.+ +++|.++|
T Consensus 126 -~~Gi---~v~~vd~~------------------d~~~l~~~i~----~~TklV~~e~~~np~g~v~D----i~~I~~la 175 (433)
T PRK08134 126 -RFGI---ETTFVKPG------------------DIDGWRAAIR----PNTRLLFGETLGNPGLEVLD----IPTVAAIA 175 (433)
T ss_pred -hCCe---EEEEECCC------------------CHHHHHHhcC----CCCeEEEEECCCcccCcccC----HHHHHHHH
Confidence 0110 00111110 1466777664 45778899988888898888 99999999
Q ss_pred HhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeEEe
Q 010250 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILV 354 (514)
Q Consensus 302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~ 354 (514)
++||+++|+|.+|+ .+.. ........|++++| |.++|.+--+|++++
T Consensus 176 ~~~gi~livD~t~a-~~~~-----~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 176 HEAGVPLLVDSTFT-TPYL-----LRPFEHGADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred HHcCCEEEEECCCc-cccc-----CCchhcCCCEEEeccccccCCCCCceEEEEE
Confidence 99999999999986 2221 11223446888765 888763233555544
No 334
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.35 E-value=1.4e-11 Score=122.46 Aligned_cols=229 Identities=18% Similarity=0.230 Sum_probs=129.8
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEE-eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFF-TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPAL 220 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~-~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~ 220 (514)
+.....++.++++++++ .++++| ++++++|+..++..+. .++++|++..++| .+...++...|....
T Consensus 57 ~~g~i~~~~~~~A~~~g---a~~~~~~~~Gst~a~~~~l~al~--------~~gd~Vlv~~~~h-~s~~~~~~~~g~~~~ 124 (294)
T cd00615 57 PTGPIKEAQELAARAFG---AKHTFFLVNGTSSSNKAVILAVC--------GPGDKILIDRNCH-KSVINGLVLSGAVPV 124 (294)
T ss_pred CChHHHHHHHHHHHHhC---CCCEEEEcCcHHHHHHHHHHHcC--------CCCCEEEEeCCch-HHHHHHHHHCCCEEE
Confidence 55667788889999884 345665 8888999998887653 3345777766654 433333333332111
Q ss_pred cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHH
Q 010250 221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV 300 (514)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l 300 (514)
... + +....|.. . ...+.+++++.+.+. ++..+++++.|. ..|.+.+ +++|.++
T Consensus 125 ~v~-----~-----~~~~~~~~--~-------~~i~~~~l~~~l~~~-~~~k~v~l~~p~--~~G~~~d----l~~I~~~ 178 (294)
T cd00615 125 YLK-----P-----ERNPYYGI--A-------GGIPPETFKKALIEH-PDAKAAVITNPT--YYGICYN----LRKIVEE 178 (294)
T ss_pred Eec-----C-----ccCcccCc--C-------CCCCHHHHHHHHHhC-CCceEEEEECCC--CCCEecC----HHHHHHH
Confidence 000 0 00000000 0 011257788877542 233445555563 4687776 9999999
Q ss_pred HHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCccccee-EEeCHHH--HHHhhhccCCCCccccc
Q 010250 301 VKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGA-ILVSPEV--SEVIHSQSNTLGSFSHG 375 (514)
Q Consensus 301 ~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pig~-v~~~~~i--~~~l~~~~~~~~~~~~~ 375 (514)
|++||+++|+||+|......+..+.........|++ +++|.++| ++.|+ +..+.+. .+.+.. .....
T Consensus 179 ~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~~div~~S~hK~l~g--~~~~~~l~~~~~~~~~~~~~~------~~~~~ 250 (294)
T cd00615 179 AHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGADIVVQSTHKTLPA--LTQGSMIHVKGDLVNPDRVNE------ALNLH 250 (294)
T ss_pred HHhcCCeEEEECcchhhhccCcccCcchhhcCCcEEEEchhcccch--HhHHHHHHhCCCcCCHHHHHH------HHHHH
Confidence 999999999999987421111111111122245776 46698865 44443 3344332 122221 11122
Q ss_pred CCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHhhhh
Q 010250 376 FTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDGVK 416 (514)
Q Consensus 376 ~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~ 416 (514)
.|.+.+.+.+++..++++.+.+ +++.+++.++.+.+++.|+
T Consensus 251 ~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 251 QSTSPSYLILASLDVARAMMALEGKELVEELIELALYARQEIN 293 (294)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 3556666777777777776643 3467778888888888775
No 335
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.34 E-value=6.7e-10 Score=113.72 Aligned_cols=311 Identities=16% Similarity=0.214 Sum_probs=183.6
Q ss_pred HHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEE
Q 010250 119 PRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 198 (514)
Q Consensus 119 p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii 198 (514)
.+..+++.+.++..... ...+...++++++++++ +.+.++.++||+.|+..|+++. +-.++++||
T Consensus 5 ~e~~~~v~~~l~s~~~~-----~~g~~~~~fE~~~a~~~---g~~~~~~~~sgt~Al~~al~~l-------~~~~gdeVi 69 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLS-----TYGPYVEEFEKEFAEYF---GVKYAVAVSSGTSALHLALRAL-------GLGPGDEVI 69 (363)
T ss_dssp HHHHHHHHHHHHHTCCS-----SSSHHHHHHHHHHHHHH---TSSEEEEESSHHHHHHHHHHHT-------TGGTTSEEE
T ss_pred HHHHHHHHHHHHhCCcc-----CCCHHHHHHHHHHHHHh---CCCeEEEeCChhHHHHHHHHhc-------CCCcCceEe
Confidence 45667777777664222 11356789999999998 4679999999999999999875 213457899
Q ss_pred EEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEc
Q 010250 199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAE 278 (514)
Q Consensus 199 ~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivE 278 (514)
+..-+|..........+..|.+- .++ |.. ...+++++++++. +++.+|++-
T Consensus 70 ~p~~t~~~~~~ai~~~G~~pv~~-----------Di~-~~~-------------~~id~~~~~~~i~----~~t~ai~~~ 120 (363)
T PF01041_consen 70 VPAYTFPATASAILWAGAEPVFV-----------DID-PET-------------LNIDPEALEKAIT----PKTKAILVV 120 (363)
T ss_dssp EESSS-THHHHHHHHTT-EEEEE------------BE-TTT-------------SSB-HHHHHHHHH----TTEEEEEEE
T ss_pred cCCCcchHHHHHHHHhccEEEEE-----------ecc-CCc-------------CCcCHHHHHHHhc----cCccEEEEe
Confidence 98888877654444443333221 011 011 1122588888887 456777776
Q ss_pred cccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh----hhhcCCcccceeEEe
Q 010250 279 PVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA----KALSSAYMPIGAILV 354 (514)
Q Consensus 279 pv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s----K~l~gG~~pig~v~~ 354 (514)
...|. ... +++|.++|+++|+.||-|-+|+ +|-. +.-...|-.-|+.+|| |.++.| --|+++.
T Consensus 121 h~~G~---~~d----~~~i~~~~~~~~i~lIeD~a~a-~g~~---~~g~~~G~~gd~~~fSf~~~K~i~~g--eGG~v~~ 187 (363)
T PF01041_consen 121 HLFGN---PAD----MDAIRAIARKHGIPLIEDAAQA-FGAR---YKGRPVGSFGDIAIFSFHPTKIITTG--EGGAVVT 187 (363)
T ss_dssp -GGGB----------HHHHHHHHHHTT-EEEEE-TTT-TT-E---ETTEETTSSSSEEEEESSTTSSS-SS--S-EEEEE
T ss_pred cCCCC---ccc----HHHHHHHHHHcCCcEEEccccc-cCce---eCCEeccCCCCceEecCCCCCCCcCC--CCeeEEe
Confidence 66653 333 9999999999999999999998 5321 1112223334777766 888654 2367777
Q ss_pred C-HHHHHHhhhccCCC------Cccc----ccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCC--
Q 010250 355 S-PEVSEVIHSQSNTL------GSFS----HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-- 421 (514)
Q Consensus 355 ~-~~i~~~l~~~~~~~------~~~~----~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~-- 421 (514)
+ +++.+.+..-...- ..+. .|..+..+++.++.+++-|+.++ ...++-+++.+++++.|..+...
T Consensus 188 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L~--~~~~~R~~~a~~y~~~L~~~~~~~~ 265 (363)
T PF01041_consen 188 NDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRLD--EIIARRRENAQRYREALAGIPGIKP 265 (363)
T ss_dssp STHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHHHHTTGTTEEE
T ss_pred cHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHhcCCCccc
Confidence 5 56666654311100 0111 24456677888888888887664 34566667777788888766221
Q ss_pred -CceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--------------------------
Q 010250 422 -PIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-------------------------- 473 (514)
Q Consensus 422 -~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-------------------------- 473 (514)
+..... ......+.+.+.+... ...+.+.+.|.++||-+.+..
T Consensus 266 ~~~~~~~~~~~~~~f~i~~~~~~~---------~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~ 336 (363)
T PF01041_consen 266 PPIPDGAERSSYYRFPIRLPDEAL---------ADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAER 336 (363)
T ss_dssp EGCGTTTEEBCESSEEEEETCCGC---------STHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHH
T ss_pred cccccccccccccccccccccccc---------chHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHH
Confidence 111111 1222234444443211 014568899999999887321
Q ss_pred ---CEEEEeCCCCCCHHHHHHHHHHHH
Q 010250 474 ---DNIMMSPPFIMSPEEVDELISKYG 497 (514)
Q Consensus 474 ---~~iRi~p~~~~t~e~id~~~~~l~ 497 (514)
..|.+-.....+++|++.++++|+
T Consensus 337 l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 337 LSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp HHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred HHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 234555456788999999998874
No 336
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.33 E-value=4.3e-11 Score=122.81 Aligned_cols=234 Identities=17% Similarity=0.167 Sum_probs=135.9
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
.+...+|+++|+++.+ .+..++++||+.|+..++.++ ..+++||+.++.|.+......... .
T Consensus 49 ~p~~~~Le~~lA~l~g---~~~~~~~~sG~aai~~~~~~l---------~~Gd~Viv~~~~y~~~~~~~~~~~------~ 110 (377)
T PRK07671 49 NPTRAALEELIAVLEG---GHAGFAFGSGMAAITAVMMLF---------SSGDHVILTDDVYGGTYRVMTKVL------N 110 (377)
T ss_pred ChHHHHHHHHHHHHhC---CCceEEeCCHHHHHHHHHHHh---------CCCCEEEECCCccchHHHHHHHHH------h
Confidence 4556789999999873 356788999998887665432 234689999988865421111000 0
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
.++. .+..++. .+.+++++++. +++.+|++|..++..|.+.+ +++|.++|+
T Consensus 111 ~~G~---~v~~v~~------------------~d~~~l~~ai~----~~tklV~le~P~NPtg~~~d----l~~I~~la~ 161 (377)
T PRK07671 111 RFGI---EHTFVDT------------------SNLEEVEEAIR----PNTKAIYVETPTNPLLKITD----IKKISTIAK 161 (377)
T ss_pred cCCe---EEEEECC------------------CCHHHHHHhcC----CCCeEEEEECCCCCCCcccC----HHHHHHHHH
Confidence 0010 0000110 01466666664 35678888877777787766 999999999
Q ss_pred hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCc-ccceeEEe-CHHHHHHhhhccCCCCcccccCCC
Q 010250 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAY-MPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTY 378 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~-~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~ 378 (514)
++|+++|+||++... ..+.. .....|+++ ++|.++|.. .-.|++++ ++++++.+... ......
T Consensus 162 ~~g~~lvvD~a~~~~-~~~~p-----~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~-------~~~~g~ 228 (377)
T PRK07671 162 EKGLLTIVDNTFMTP-YWQSP-----ISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFV-------QNSTGG 228 (377)
T ss_pred HcCCEEEEECCCCcc-ccCCh-----hhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHH-------HHhhcC
Confidence 999999999998631 22221 223357764 669998631 12344555 56677666531 111122
Q ss_pred CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEE
Q 010250 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEF 438 (514)
Q Consensus 379 ~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~ 438 (514)
..+|..+..++..++.+.. ..++..++...+.+.|++.+ .+|... ...|.|.++.|++
T Consensus 229 ~~~~~~a~l~~~~l~tl~~--R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~ 301 (377)
T PRK07671 229 ILGPQDSWLLLRGLKTLGI--RMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDV 301 (377)
T ss_pred CCCHHHHHHHHcCcChHHH--HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEe
Confidence 3456666655555554432 24455566666666665431 122211 1346788999988
No 337
>PRK05939 hypothetical protein; Provisional
Probab=99.33 E-value=1.1e-10 Score=120.51 Aligned_cols=158 Identities=13% Similarity=0.168 Sum_probs=105.2
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccce--eeeecCCCccc
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTL--IAASLSGLPAL 220 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~--~~~~~s~~~~~ 220 (514)
++...+|+++|+++.+ .+..+.++||+.|+..++.... ..+++||+.+..|.+... ..+...|..
T Consensus 46 ~p~~~~lE~~la~leg---~~~~v~~ssG~~Ai~~~l~all--------~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~-- 112 (397)
T PRK05939 46 TPTTAALEAKITKMEG---GVGTVCFATGMAAIAAVFLTLL--------RAGDHLVSSQFLFGNTNSLFGTLRGLGVE-- 112 (397)
T ss_pred CHHHHHHHHHHHHHhC---CCeEEEeCCHHHHHHHHHHHHc--------CCCCEEEECCCccccHHHHHHHHHhcCCE--
Confidence 4556789999999863 3467888899999999987653 334678888777755321 111111110
Q ss_pred cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHH
Q 010250 221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV 300 (514)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l 300 (514)
+..++.. +.+++++.+. +++.+|++|.+++..|.+.+ +++|.++
T Consensus 113 ----------v~~v~~~------------------d~e~l~~~l~----~~tklV~vesp~NptG~v~d----l~~I~~l 156 (397)
T PRK05939 113 ----------VTMVDAT------------------DVQNVAAAIR----PNTRMVFVETIANPGTQVAD----LAGIGAL 156 (397)
T ss_pred ----------EEEECCC------------------CHHHHHHhCC----CCCeEEEEECCCCCCCCHHh----HHHHHHH
Confidence 1111110 1466776664 45778999999999998876 9999999
Q ss_pred HHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccceeEEeC
Q 010250 301 VKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAILVS 355 (514)
Q Consensus 301 ~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pig~v~~~ 355 (514)
|+++|+++|+|++|+.. ..++......|++ +++|.++|.+..+|+++..
T Consensus 157 a~~~gi~livD~t~a~~------~~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~ 207 (397)
T PRK05939 157 CRERGLLYVVDNTMTSP------WLFRPKDVGASLVINSLSKYIAGHGNALGGAVTD 207 (397)
T ss_pred HHHcCCEEEEECCcccc------cccCccccCCEEEEecCeecccCCCCeEEEEEec
Confidence 99999999999998521 1122222345766 5779999844778887664
No 338
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.32 E-value=2.2e-10 Score=113.18 Aligned_cols=316 Identities=14% Similarity=0.154 Sum_probs=204.0
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEE-eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFF-TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPAL 220 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~-~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~ 220 (514)
..+...+|.++|++.. ++|.|.+ -++|+..=.+.+.++++|+..+|...|+.+|+ ..+-||....+.++.|-.+
T Consensus 107 ~l~li~~Lq~~L~~IT---G~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LI-P~SAHGTNPASAam~G~~V- 181 (496)
T COG1003 107 YLELIYELQEWLKEIT---GMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLI-PDSAHGTNPASAAMAGFKV- 181 (496)
T ss_pred HHHHHHHHHHHHHHhc---CCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEe-eccccCCChhhHhhcCceE-
Confidence 4456677888888875 7888877 56899999999999999999998776655555 5688998766666655332
Q ss_pred cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHH
Q 010250 221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV 300 (514)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l 300 (514)
..++|.+ -+..|++||++.+. +++|++++- .+++-|+.... +.+|+++
T Consensus 182 -----------V~V~~~~-------------~G~VDlddLk~k~~----~~~AalMiT-nPsT~GvFE~~---I~ei~~i 229 (496)
T COG1003 182 -----------VVVKCDE-------------NGNVDLDDLRAKAE----DNLAALMIT-NPSTLGVFEED---IREICEI 229 (496)
T ss_pred -----------EEEecCC-------------CCCccHHHHHHHhc----cceeEEEec-cCcccccchhh---HHHHHHH
Confidence 2233321 12334677777664 577777764 33555777654 8999999
Q ss_pred HHhcCCEEEEech----hcCcccccccc-eecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhc----cC----
Q 010250 301 VKKYDILFIADEV----ICAFGRLGTMF-GCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQ----SN---- 367 (514)
Q Consensus 301 ~~~~gillI~DEv----~tG~gr~G~~~-~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~----~~---- 367 (514)
.+++|.+|..|-+ +-|..|-|.++ -+.|+++.- ||+-.-|||+-..|-+.+++++...+... ..
T Consensus 230 vH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~HlNLHK---TF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~ 306 (496)
T COG1003 230 VHEAGGQVYYDGANLNAIVGLARPGDMGFDVVHLNLHK---TFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYR 306 (496)
T ss_pred HHHcCCEEEecCcchhhhhccccccccccceEEeeccc---ccccCCCCCCCCCCceehHhhccccCCCCcccCCCcccc
Confidence 9999999999975 44777777643 345555432 66666667655567777888887766431 10
Q ss_pred ----CCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH---HHHHHHHHHHHhhhhhccCCCceeEEEeee-eeEEEEEc
Q 010250 368 ----TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV---EQVNKIAPKFQDGVKAFSDSPIIGEIRGTG-LILGTEFA 439 (514)
Q Consensus 368 ----~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~---~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g-~~~~i~~~ 439 (514)
..........+.||......+.+-+..+-.+++. +..--+.+++..+|+..-..+.. +.. ...-+.+.
T Consensus 307 ~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~y~~~y~----~~~~~~HE~ild 382 (496)
T COG1003 307 LDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGYYPVPYT----GENRVAHECILD 382 (496)
T ss_pred ccCCCCccceeeccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhcCccccC----CCCcceeEEEee
Confidence 0001122345567766677777777777665543 44555778888888753121211 111 01111222
Q ss_pred cCCCCCCCCCCccchHHHHHHHHHHCCcEEE----e--eCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 440 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----V--SGDNIMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~--~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
...-.. ...-....++++|++.|+..- | ..+.+.+-|.-.-+++++|+++++|.+..++..+
T Consensus 383 ~r~l~~----~~Gv~~~DvAKrLlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~ 450 (496)
T COG1003 383 ARPLKK----ETGVRALDVAKRLLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADA 450 (496)
T ss_pred chHhHh----hcCCcHHHHHHHHHhcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 110000 000125568899999998764 2 3467999999999999999999999988876654
No 339
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.30 E-value=6.8e-11 Score=120.98 Aligned_cols=237 Identities=13% Similarity=0.134 Sum_probs=146.2
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
++....|+++|+++- +-+.+++++||+.|+.+++...+ ...++||+.+..|++....... ..+
T Consensus 61 nPt~~~le~~la~LE---g~~~a~~~~SGmaAi~~~~~~ll--------~~GD~Vv~~~~~Yg~t~~l~~~------~l~ 123 (395)
T PRK08114 61 TLTHFSLQEAMCELE---GGAGCALYPCGAAAVANAILAFV--------EQGDHVLMTGTAYEPTQDFCSK------ILS 123 (395)
T ss_pred ChhHHHHHHHHHHHh---CCCeEEEEhHHHHHHHHHHHHHc--------CCCCEEEEeCCCcHHHHHHHHH------HHH
Confidence 345678999999874 34678999999999999887553 3346788877777665322100 001
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
.++.. +..++. .+.+++++++. +++++|++|.+.+..|.+.+ +++|.++|+
T Consensus 124 ~~Gi~---v~~vd~------------------~d~~~l~~~l~----~~TrlV~~EtpsNp~~~v~D----I~~Ia~ia~ 174 (395)
T PRK08114 124 KLGVT---TTWFDP------------------LIGADIAKLIQ----PNTKVVFLESPGSITMEVHD----VPAIVAAVR 174 (395)
T ss_pred hcCcE---EEEECC------------------CCHHHHHHhcC----CCceEEEEECCCCCCCEeec----HHHHHHHHH
Confidence 11111 111110 01356676664 46789999999999999998 999999999
Q ss_pred hcC--CEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCc-ccceeEEeCHHHHHHhhhccCCCCcccccCC
Q 010250 303 KYD--ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAY-MPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 377 (514)
Q Consensus 303 ~~g--illI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~-~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t 377 (514)
++| +++|+|.+++ . | ..++......|+++.| |.|+|.. .-.|+++.++++.+.+... ....|.
T Consensus 175 ~~g~g~~lvVDnT~a-~---p--~~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~-----~~~~G~- 242 (395)
T PRK08114 175 SVNPDAVIMIDNTWA-A---G--VLFKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLREN-----SYLMGQ- 242 (395)
T ss_pred HhCCCCEEEEECCCc-c---c--cccCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHH-----HHhccC-
Confidence 985 9999999986 2 2 1244444557888765 9998842 3456666777766655421 011222
Q ss_pred CCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEcc
Q 010250 378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD 440 (514)
Q Consensus 378 ~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~ 440 (514)
..+|..|...+..|+.+.- ..++..+++..+.+.|++.+ .+|... ...|.|.++.|++..
T Consensus 243 -~~~p~~a~l~~rgl~TL~l--R~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~ 317 (395)
T PRK08114 243 -MVDADTAYMTSRGLRTLGV--RLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKK 317 (395)
T ss_pred -CCCHHHHHHHHcCCCcHHH--HHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecC
Confidence 3457766666555554321 14455555556666665431 122211 134678899999864
No 340
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.28 E-value=1.8e-09 Score=108.57 Aligned_cols=314 Identities=16% Similarity=0.169 Sum_probs=187.7
Q ss_pred HHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEE
Q 010250 119 PRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 198 (514)
Q Consensus 119 p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii 198 (514)
.+..+++.+.++.+.... -+...++++.+++++ +...++.++|||.|+..|++.+- . ..++.||
T Consensus 15 ~~e~~~v~~vl~sg~i~~------G~~v~~FE~~~ae~~---G~k~ava~~sgT~AL~laL~al~------i-g~GDeVI 78 (374)
T COG0399 15 EEELAAVQEVLKSGWLTG------GPFVRRFEQAFAEYL---GVKYAVAVSSGTAALHLALLALA------I-GPGDEVI 78 (374)
T ss_pred hHHHHHHHHHHHcCCeec------ChHHHHHHHHHHHHh---CCCeEEEecChHHHHHHHHHhcC------C-CCCCEEE
Confidence 456777778777654331 244578999999987 56789999999999999998552 1 3356888
Q ss_pred EEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEc
Q 010250 199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAE 278 (514)
Q Consensus 199 ~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivE 278 (514)
+.+-+|-...-..+..+..|.+- .++ |+.| ..+.+.+|+.|. +++.|||.=
T Consensus 79 ~ps~TfvATan~i~~~Ga~PVFv-----------Did-~~T~-------------nid~~~ie~aIt----~~tKAIipV 129 (374)
T COG0399 79 VPSFTFVATANAVLLVGAKPVFV-----------DID-PDTL-------------NIDPDLIEAAIT----PRTKAIIPV 129 (374)
T ss_pred ecCCchHHHHHHHHHcCCeEEEE-----------ecC-Cccc-------------CCCHHHHHHHcc----cCCeEEEEe
Confidence 88877765543333333333321 111 1111 123577888876 335666655
Q ss_pred cccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh----hhhcCCcccceeEEe
Q 010250 279 PVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA----KALSSAYMPIGAILV 354 (514)
Q Consensus 279 pv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s----K~l~gG~~pig~v~~ 354 (514)
...| ..+. ++.|.+||++||+.+|-|-+|+ +|-+ +.-...|-.-|+.+|| |.|+.| --|+++.
T Consensus 130 hl~G---~~~d----m~~i~~la~~~~l~vIEDaAqa-~Ga~---y~gk~vGt~Gd~~~fSF~~~K~ittg--EGGav~t 196 (374)
T COG0399 130 HLAG---QPCD----MDAIMALAKRHGLPVIEDAAQA-HGAT---YKGKKVGSFGDIGAFSFHATKNLTTG--EGGAVVT 196 (374)
T ss_pred hhcc---CCCC----HHHHHHHHHHcCCeEEEEcchh-ccCe---ecCcccccccceEEEEecCCCCcccc--CceEEEe
Confidence 5554 3343 9999999999999999999997 5432 1112223334677766 888764 2367777
Q ss_pred C-HHHHHHhhh---ccC------CCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCce
Q 010250 355 S-PEVSEVIHS---QSN------TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPII 424 (514)
Q Consensus 355 ~-~~i~~~l~~---~~~------~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~ 424 (514)
+ +++.+.++. ++. ++.....|+.+-.+-+.++.+++-|+.++ ++.++-++..++..+.|+++......
T Consensus 197 nd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~--~~~~~R~~~a~~Y~~~l~~~~~~~~p 274 (374)
T COG0399 197 NDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERLD--EINERRREIAQIYAEALKGLPGITLP 274 (374)
T ss_pred CCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhhcCCCcccc
Confidence 5 566665543 211 11112234455556677777777777654 45666677777778888766322111
Q ss_pred eEEEee-e--eeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEE----Eee--------------C----------
Q 010250 425 GEIRGT-G--LILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV----RVS--------------G---------- 473 (514)
Q Consensus 425 ~~v~g~-g--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~----~~~--------------g---------- 473 (514)
....+. . .++.+.+..... ..+.+...|.++||.. .|. +
T Consensus 275 ~~~~~~~~~~~~~~i~~~~~~~----------~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~ 344 (374)
T COG0399 275 PEPDGAVHAWHLYTILVDEEGI----------SRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSE 344 (374)
T ss_pred CCCCCceeeeeeeEEEecCCCC----------CHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhh
Confidence 111111 1 122233332200 1345778888886553 220 1
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 474 DNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 474 ~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
..+.+-....++++|+++++++|++++.+
T Consensus 345 r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 345 RILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred CeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence 23455444578999999999999998753
No 341
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.27 E-value=1.2e-10 Score=118.98 Aligned_cols=235 Identities=17% Similarity=0.223 Sum_probs=139.7
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
++....+++.|+++-+ -+.++.++||..|+.+++.... ...++||.....|+|........ ..
T Consensus 54 nPt~~~le~~la~Le~---g~~a~~~~SGmaAi~~~l~~ll--------~~Gd~iv~~~~~Y~~t~~~~~~~------l~ 116 (386)
T PF01053_consen 54 NPTVRALEQRLAALEG---GEDALLFSSGMAAISAALLALL--------KPGDHIVASDDLYGGTYRLLEEL------LP 116 (386)
T ss_dssp -HHHHHHHHHHHHHHT----SEEEEESSHHHHHHHHHHHHS---------TTBEEEEESSSSHHHHHHHHHC------HH
T ss_pred cccHHHHHHHHHHhhc---ccceeeccchHHHHHHHHHhhc--------ccCCceEecCCccCcchhhhhhh------hc
Confidence 4556789999998863 3679999999999998887653 23568999999998853111100 00
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
.+++. +..++. .+.+++++++. +++.+|++|++.+....+++ |++|+++|+
T Consensus 117 ~~gv~---v~~~d~------------------~d~~~l~~~l~----~~t~~v~~EspsNP~l~v~D----l~~i~~~a~ 167 (386)
T PF01053_consen 117 RFGVE---VTFVDP------------------TDLEALEAALR----PNTKLVFLESPSNPTLEVPD----LEAIAKLAK 167 (386)
T ss_dssp HTTSE---EEEEST------------------TSHHHHHHHHC----TTEEEEEEESSBTTTTB-------HHHHHHHHH
T ss_pred ccCcE---EEEeCc------------------hhHHHHHhhcc----ccceEEEEEcCCCccccccc----HHHHHHHHH
Confidence 11111 111111 01477777775 48999999999888876766 999999999
Q ss_pred hcC-CEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCc-ccceeEEeC--HHHHHHhhhccCCCCcccccC
Q 010250 303 KYD-ILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAY-MPIGAILVS--PEVSEVIHSQSNTLGSFSHGF 376 (514)
Q Consensus 303 ~~g-illI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~-~pig~v~~~--~~i~~~l~~~~~~~~~~~~~~ 376 (514)
++| +++|+|...... ..++.+....|+++ ..|-++|.. .-.|+++++ +++.+.+.... ...|.
T Consensus 168 ~~g~~~~vVDnT~atp------~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~-----~~~G~ 236 (386)
T PF01053_consen 168 EHGDILVVVDNTFATP------YNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFR-----RLLGA 236 (386)
T ss_dssp HTTT-EEEEECTTTHT------TTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHH-----HHHT-
T ss_pred HhCCceEEeeccccce------eeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchh-----hhcCc
Confidence 998 999999987521 23333434468875 569888622 335666655 46777665311 12222
Q ss_pred CCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEE------------------EeeeeeEEEEE
Q 010250 377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI------------------RGTGLILGTEF 438 (514)
Q Consensus 377 t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v------------------~g~g~~~~i~~ 438 (514)
..+|..+...+..|+.+.. ..++..+++..+.+.|++. |.+..| .|.|.++.|++
T Consensus 237 --~~~p~da~ll~rgl~Tl~~--R~~~~~~nA~~lA~~L~~h---p~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l 309 (386)
T PF01053_consen 237 --TLSPFDAWLLLRGLRTLPL--RMERQNENAEALAEFLEEH---PKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFEL 309 (386)
T ss_dssp --B--HHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHTS---TTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEE
T ss_pred --cchHHHHHHHhcCCCcHHH--HHHHHHHHHHHHHHHHHhC---CCCCeEEEcccccccceeeeeecccccCceeEEEe
Confidence 2345655555555543321 2455556666666666543 333332 35566899998
Q ss_pred ccC
Q 010250 439 ADN 441 (514)
Q Consensus 439 ~~~ 441 (514)
.+.
T Consensus 310 ~~~ 312 (386)
T PF01053_consen 310 KGG 312 (386)
T ss_dssp SSH
T ss_pred ccc
Confidence 754
No 342
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.27 E-value=2.5e-10 Score=118.83 Aligned_cols=161 Identities=14% Similarity=0.197 Sum_probs=99.7
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
.+...+++++++++.+ .+..++++||++|+.+++.... ..+++||+....|++........- .
T Consensus 68 ~pt~~~le~~la~l~g---~~~~v~fsSG~~Ai~~al~~ll--------~~Gd~VI~~~~~y~~t~~~~~~~l------~ 130 (437)
T PRK05613 68 NPTVEALENRIASLEG---GVHAVAFASGQAAETAAILNLA--------GAGDHIVTSPRLYGGTETLFLVTL------N 130 (437)
T ss_pred ChHHHHHHHHHHHHhC---CCeEEEeCCHHHHHHHHHHHhc--------CCCCEEEECCCccHHHHHHHHHHH------H
Confidence 3556788999999863 3578899999999998886543 334678887777766421100000 0
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
.++.. +..++.+. +.+++++.+. +++.+|++|...+..|.+.+ +++|.++|+
T Consensus 131 ~~Gi~---v~~vd~~~-----------------d~e~l~~~l~----~~tk~V~~e~~~Np~~~v~d----i~~I~~la~ 182 (437)
T PRK05613 131 RLGIE---VTFVENPD-----------------DPESWQAAVQ----PNTKAFFGETFANPQADVLD----IPAVAEVAH 182 (437)
T ss_pred hcCeE---EEEECCCC-----------------CHHHHHHhCC----ccCeEEEEECCCCCCCcccC----HHHHHHHHH
Confidence 01100 01111000 1356666664 34667888887777777777 999999999
Q ss_pred hcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeEEe
Q 010250 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILV 354 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~ 354 (514)
++|+++|+|.+++ .|.. +.......|++++| |.++|-+-.+|++++
T Consensus 183 ~~gi~livD~t~a-~g~~-----~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv 230 (437)
T PRK05613 183 RNQVPLIVDNTIA-TAAL-----VRPLELGADVVVASLTKFYTGNGSGLGGVLI 230 (437)
T ss_pred HcCCeEEEECCCc-cccc-----cChHHhCCCEEEeeccceecCCCcceeEEEE
Confidence 9999999999986 3221 11112235888765 988872234455444
No 343
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.27 E-value=6.5e-10 Score=102.70 Aligned_cols=275 Identities=15% Similarity=0.225 Sum_probs=162.4
Q ss_pred CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcc
Q 010250 161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW 240 (514)
Q Consensus 161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
..+.+....+..|.+++.+++.+ .|++.||+.+.+.|.-++..+..- + ..+..++..+.|
T Consensus 85 t~dnic~GvGsDE~ID~iiR~~c-------~PGkeKIl~cPPtysMY~v~A~iN-d------------~eVvkvpl~pdF 144 (375)
T KOG0633|consen 85 TSDNICVGVGSDELIDLIIRCVC-------DPGKEKILDCPPTYSMYVVDAAIN-D------------AEVVKVPLNPDF 144 (375)
T ss_pred CccceEEecCcHHHHHHHHhhee-------cCCccceeecCCcceeEEEEeecC-C------------ceEEEecCCCCc
Confidence 45788999999999999999874 378999999999997665444321 1 112222221111
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 320 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~ 320 (514)
. -+ .+.+...+... ..+.++++....+.+|.+.. .+-+.+|.+.-+ +.++++||+|-.|.-.
T Consensus 145 ~------------ln-vdai~evl~~d--s~iK~~F~tSPgNPtg~~ik-~~di~KiLe~p~--nglVVvDEAYidFsg~ 206 (375)
T KOG0633|consen 145 S------------LN-VDAIAEVLELD--SKIKCIFLTSPGNPTGSIIK-EDDILKILEMPD--NGLVVVDEAYIDFSGV 206 (375)
T ss_pred c------------cc-HHHHHHHHhcc--ccceEEEEcCCCCCCccccc-HHHHHHHHhCCC--CcEEEEeeeeEeeccc
Confidence 1 11 24444444322 23445444444444455544 233444444333 7899999999877322
Q ss_pred cccceecccCCCCchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH--H
Q 010250 321 GTMFGCDKYSIKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI--Y 395 (514)
Q Consensus 321 G~~~~~~~~gv~pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~--~ 395 (514)
+. ...+..--|.++ ||||.+|-.++++|+.+.+.++.+.+.... ..|.-+..+..+|++|+.- +
T Consensus 207 ~S--~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~~K---------aPYNiS~~~s~~AL~Als~~n~ 275 (375)
T KOG0633|consen 207 ES--RMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNRAK---------APYNISVAGSVAALAALSDSNG 275 (375)
T ss_pred cc--cchHhHhCCceeehhhhhhhcCcceeEeecccccHHHHHHHHhcc---------CCccccchhHHHHHHhcCcccc
Confidence 21 222222236655 689977764599999999999988887421 3555566667777777652 1
Q ss_pred h-hccHHHHHHHHHHHHHhhhhhccCCCceeEEEe--eeeeEEEEEccCCCCCCCCCCccchHHH-HHHHHHHCCcEEEe
Q 010250 396 K-ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG--TGLILGTEFADNKSPNEPFPPEWGIGAY-FGAQCEKHGMLVRV 471 (514)
Q Consensus 396 ~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g--~g~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~Gv~~~~ 471 (514)
+ -+...+.+.+.+.+|-..|.++ +.+.+..| ...++-++..+... +.+.. +.+.+.+.|+.++.
T Consensus 276 kkme~~rdaiv~er~RL~keLt~v---~~~~~~~gg~daNFiLi~v~~~~n---------~~akkly~q~at~~gVvVRf 343 (375)
T KOG0633|consen 276 KKMEDVRDAIVRERERLFKELTEV---PFLNDYPGGSDANFILIEVTGGDN---------GMAKKLYKQDATKMGVVVRF 343 (375)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcC---ccccCCCCcccccEEEEEEcCCCc---------HHHHHHHHHHHHhcceEEEE
Confidence 1 1234455555566666667665 33322111 23344555543221 12333 33455578999996
Q ss_pred eC------CEEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250 472 SG------DNIMMSPPFIMSPEEVDELISKYGKA 499 (514)
Q Consensus 472 ~g------~~iRi~p~~~~t~e~id~~~~~l~~~ 499 (514)
.| +.+|++ ..|+|+-+.+++.|+++
T Consensus 344 rgse~~c~G~lRit---vGt~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 344 RGSEEGCKGYLRIT---VGTPEENTVLMKCLKQF 374 (375)
T ss_pred cCCccccceeEEEE---cCCcccchHHHHHHHhh
Confidence 54 469999 78899999999888765
No 344
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.26 E-value=3.9e-09 Score=107.05 Aligned_cols=354 Identities=15% Similarity=0.159 Sum_probs=188.3
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV 179 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al 179 (514)
..|||+.|-.++ +--.++.++||.. +.-. |+ -.+...+|++..++++ +.+.++++.+|..|...+.
T Consensus 41 dV~IDLrSDTgT---~apS~~m~aAM~~----GDD~---Y~-gdpSv~~Lee~vael~---G~E~alpthqGRgaE~Il~ 106 (467)
T TIGR02617 41 DVFIDLLTDSGT---GAVTQSMQAAMMR----GDEA---YS-GSRSYYALAESVKNIF---GYQYTIPTHQGRGAEQIYI 106 (467)
T ss_pred CeEEECccCCCC---CCCCHHHHHHHHc----CCcc---cc-cCchHHHHHHHHHHHh---CCceEEECCCCchHHHHHH
Confidence 347999988554 2135677777765 2111 11 2334568999999998 6778999999999888888
Q ss_pred HHHHHHHhhcCCCCccEEE------EEecCCcccc-eeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250 180 KLVWYYNNALGRPNKKKFI------ARQKSYHGST-LIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY 252 (514)
Q Consensus 180 k~a~~~~~~~~~~~~~~ii------~~~~~yHG~t-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (514)
++... +.++.++ ++...||-.+ -+...++|..... .+.+.....+.+..|+.
T Consensus 107 ~~~~~-------~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~----l~~~ea~~~~~~~~fkG---------- 165 (467)
T TIGR02617 107 PVLIK-------KREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARN----VYTKEAFDTGVRYDFKG---------- 165 (467)
T ss_pred Hhhcc-------cccccccccccccccceEEEEecchHHHHHcCceeec----ccchhhcccccCCCCCC----------
Confidence 76531 1111222 2223444443 2233333321110 00000000111111221
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc----Cc------ccccc
Q 010250 253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC----AF------GRLGT 322 (514)
Q Consensus 253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t----G~------gr~G~ 322 (514)
..++++|+++|...+++++..+.+.-.+|..|-.+.|.+.+++++++|++||+.++.|-+-- -| +..|.
T Consensus 166 -~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~ 244 (467)
T TIGR02617 166 -NFDLEGLERGIEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNW 244 (467)
T ss_pred -CcCHHHHHHHHhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCC
Confidence 12368899999876666777777777777666677788999999999999999999996531 01 12221
Q ss_pred cc---eecccCCCCchh--chhhhhcCCcccceeEEe-CHH-HHHHhhhccCCCCcccccCCCCCcHHHHHHHH-HHHHH
Q 010250 323 MF---GCDKYSIKPDLV--SFAKALSSAYMPIGAILV-SPE-VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAI-EALKI 394 (514)
Q Consensus 323 ~~---~~~~~gv~pDiv--~~sK~l~gG~~pig~v~~-~~~-i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~-aal~~ 394 (514)
.- +-+.+. ..|.+ |++|+++ .|+|.+++ +++ +.+.+.......-.+...-||+|-.---..|+ ..|+.
T Consensus 245 si~eI~rE~~~-~aDsvt~slsKglg---ApvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e 320 (467)
T TIGR02617 245 SIEQITRETYK-YADMLAMSAKKDAM---VPMGGLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYD 320 (467)
T ss_pred CHHHHHHHhhc-cCCEEEEEcCCCCC---CcccceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhh
Confidence 10 001111 24554 5678876 57776665 433 33333322112223334457765322111112 13443
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEcc--CCCCCCCCCCccchHHHHHHHH-HHCCcEEE-
Q 010250 395 YKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFAD--NKSPNEPFPPEWGIGAYFGAQC-EKHGMLVR- 470 (514)
Q Consensus 395 ~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~- 470 (514)
.-+++...+--...++|.+.|.+. ..|++. +-|.+.+ ++-.. +..+...|+ +..++-.| ++-||-..
T Consensus 321 ~~~~~yl~~ri~qv~yl~~~L~~~-Gvpi~~-~Gghav~--iDa~~~lphip~~~fp-----a~al~~~ly~~~GiR~~e 391 (467)
T TIGR02617 321 GMNLDWLAYRINQVQYLVNGLEEI-GVVCQQ-AGGHAAF--VDAGKLLPHIPADQFP-----AHALACELYKVAGIRAVE 391 (467)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhC-CCcEEe-cCccEEE--EehhhhCCCCChhhCc-----HHHHHHHHHHHcCcceEe
Confidence 333444444445567788888764 566665 4444332 22111 111111122 33344444 34454322
Q ss_pred ---------ee--------CCEEEEeCCC-CCCHHHHHHHHHHHHHHHHH
Q 010250 471 ---------VS--------GDNIMMSPPF-IMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 471 ---------~~--------g~~iRi~p~~-~~t~e~id~~~~~l~~~l~~ 502 (514)
+. -+-+|++.|- .-|.+++|...+++....++
T Consensus 392 ~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 392 IGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred ecceecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 11 1348998884 45999999999998877653
No 345
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.21 E-value=1.1e-10 Score=113.38 Aligned_cols=194 Identities=18% Similarity=0.206 Sum_probs=126.8
Q ss_pred ccCCCCCHHHHHHHHHHHhc-CCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcC
Q 010250 112 TALGGSEPRLVAAATAQLNT-LPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALG 190 (514)
Q Consensus 112 ~~lGh~~p~v~~A~~~~l~~-~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~ 190 (514)
..+.+.+++=.+++- +++. +..|++..+ +....|+++|+.+=++. -.+.+.||..|...|+....
T Consensus 33 Tsy~F~d~~haa~lF-~l~~~G~iYsRi~N---PT~~vlE~RiAaLEGG~---aa~a~aSG~AA~~~ai~~la------- 98 (426)
T COG2873 33 TSYVFDDTDHAAALF-GLKEPGNIYTRIMN---PTTDVLEERIAALEGGV---AALAVASGQAAITYAILNLA------- 98 (426)
T ss_pred eeeecCCHHHHHHHh-CCCcCCceeeeccC---chHHHHHHHHHHhhcch---hhhhhccchHHHHHHHHHhc-------
Confidence 445555554333322 2343 334455433 33467889999884332 35678899999999987553
Q ss_pred CCCccEEEEEecCCcccc-eeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC
Q 010250 191 RPNKKKFIARQKSYHGST-LIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP 269 (514)
Q Consensus 191 ~~~~~~ii~~~~~yHG~t-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~ 269 (514)
...+.|++.+.-|-|.. +.... .+.+++...++ +.+ +++.+++.|.
T Consensus 99 -~aGD~iVss~~LYGGT~~lf~~t-------l~~~Gi~v~fv---d~~------------------d~~~~~~aI~---- 145 (426)
T COG2873 99 -GAGDNIVSSSKLYGGTYNLFSHT-------LKRLGIEVRFV---DPD------------------DPENFEAAID---- 145 (426)
T ss_pred -cCCCeeEeeccccCchHHHHHHH-------HHhcCcEEEEe---CCC------------------CHHHHHHHhC----
Confidence 23578999888886652 11110 11223222221 111 1367777775
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcc
Q 010250 270 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYM 347 (514)
Q Consensus 270 ~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~ 347 (514)
+++++|.+|.+-++++.++. +++|.++|+++|++||+|...+. .+.+.......|||+ .+|.++|-+-
T Consensus 146 ~nTkavf~EtigNP~~~v~D----ie~ia~iAh~~gvpliVDNT~at------pyl~rP~~hGADIVvHS~TK~igGhGt 215 (426)
T COG2873 146 ENTKAVFAETIGNPGLDVLD----IEAIAEIAHRHGVPLIVDNTFAT------PYLCRPIEHGADIVVHSATKYIGGHGT 215 (426)
T ss_pred cccceEEEEeccCCCccccC----HHHHHHHHHHcCCcEEEecCCCc------ceecchhhcCCCEEEEeecccccCCcc
Confidence 67899999999999998887 99999999999999999998652 244555555679885 6799999557
Q ss_pred cceeEEeCHHHHHHh
Q 010250 348 PIGAILVSPEVSEVI 362 (514)
Q Consensus 348 pig~v~~~~~i~~~l 362 (514)
.||.+++..--.++-
T Consensus 216 ~iGG~iVD~G~FDw~ 230 (426)
T COG2873 216 AIGGVIVDGGKFDWT 230 (426)
T ss_pred ccceEEEeCCccccc
Confidence 889888865544544
No 346
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.16 E-value=9.1e-10 Score=112.70 Aligned_cols=233 Identities=15% Similarity=0.180 Sum_probs=137.9
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
++...+|+++++++. +.+.++.++||+.|+.+++.... ..+++||+....|.+........ ..
T Consensus 63 ~P~~~~lE~~la~le---g~~~av~~sSG~aAi~~al~all--------~~GD~Vl~~~~~yg~t~~~~~~~------~~ 125 (384)
T PRK06434 63 NPTVQAFEEKYAVLE---NAEHALSFSSGMGAITSAILSLI--------KKGKRILSISDLYGQTFYFFNKV------LK 125 (384)
T ss_pred ChhHHHHHHHHHHHh---CCCcEEEeCCHHHHHHHHHHHHh--------CCCCEEEEecCccchHHHHHHHH------HH
Confidence 355678999999986 34578999999999999997653 23567888766665542111000 00
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
.++.. +..++.++ .+.++ ..++++.+|++|.+.+..+.+++ +++|.++|+
T Consensus 126 ~~Gi~---v~fvd~~~------------------~~~~~-----l~~~~tklv~~e~~snpt~~v~D----i~~I~~la~ 175 (384)
T PRK06434 126 TLGIH---VDYIDTDR------------------LNSLD-----FDPSNYDLIYAESITNPTLKVPD----IKNVSSFCH 175 (384)
T ss_pred hcCcE---EEEECCCC------------------hhhee-----ecCCCeeEEEEEcCCCCCceeec----HHHHHHHHH
Confidence 01110 11111110 01111 12346789999998888777766 999999999
Q ss_pred hcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCc-ccceeEEe-CHHHHHHhhhccCCCCcccccCCC
Q 010250 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAY-MPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTY 378 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~-~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~ 378 (514)
++| +++|.++. -+. .....+...|++++| |.++|.. .-.|+++. ++++.+.+... ......
T Consensus 176 ~~~--lvVD~t~~-s~~-----~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~-------~~~~G~ 240 (384)
T PRK06434 176 END--VIVDATFA-SPY-----NQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVER-------RKTLGS 240 (384)
T ss_pred HcC--eEEECCCC-Ccc-----cCCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHH-------HHhcCC
Confidence 998 46699974 212 223334557988876 8888721 22355555 45665655421 111123
Q ss_pred CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-----CCcee----EEEeeeeeEEEEEc
Q 010250 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----EIRGTGLILGTEFA 439 (514)
Q Consensus 379 ~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----~v~g~g~~~~i~~~ 439 (514)
..+|+.++.++..|+.+. ...++..++...+.+.|+..+. +|... ..+|.|.|+.|++.
T Consensus 241 ~~~~~~A~l~~~gL~tL~--~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~ 308 (384)
T PRK06434 241 NPDPIQAYLALRGLKTLG--LRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELR 308 (384)
T ss_pred CCCHHHHHHHHhCCCcHH--HHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEEC
Confidence 346777777766666553 3456666777777777765421 22110 12467889999986
No 347
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.15 E-value=6e-08 Score=96.19 Aligned_cols=312 Identities=14% Similarity=0.151 Sum_probs=183.7
Q ss_pred chHHHHHHHHHHhcCc-----C-CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC
Q 010250 144 KPSLDLAKELLEMFTA-----S-KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL 217 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~-----~-~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~ 217 (514)
....+|...+.+...+ . .--.++.+++-+.+.+.+++++. ...+.|++=..+|.+.. .++-..|.
T Consensus 100 ~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~--------N~gd~vlie~~ty~~AL-~s~~a~gv 170 (472)
T KOG0634|consen 100 SGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLI--------NRGDHVLIEEYTYPSAL-QSMEALGV 170 (472)
T ss_pred cCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhh--------cCCCceEEecccchHHH-HhccccCc
Confidence 3345666666665431 1 11378999999999999999886 34566777666775432 11111111
Q ss_pred ccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC-----CcEEEEEEcc-ccCCCCcccCCh
Q 010250 218 PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP-----ETIAAFIAEP-VIGAGGVIPPPA 291 (514)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~-----~~~aavivEp-v~~~~G~~~p~~ 291 (514)
..++++- +-++ .+.+.|++.+..-.+ .+.....+=| -|+.+|... +.
T Consensus 171 --------------~~ipv~m----d~~G--------i~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tl-s~ 223 (472)
T KOG0634|consen 171 --------------KIIPVKM----DQDG--------IDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTL-SL 223 (472)
T ss_pred --------------eEEeccc----cCCC--------CCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCcc-CH
Confidence 1111110 0111 124777777654221 1233444444 578888665 45
Q ss_pred hHHHHHHHHHHhcCCEEEEechhcCcccccc----------cceecc---------cCCC-----CchhchhhhhcCCcc
Q 010250 292 TYFEKVQAVVKKYDILFIADEVICAFGRLGT----------MFGCDK---------YSIK-----PDLVSFAKALSSAYM 347 (514)
Q Consensus 292 ~~L~~l~~l~~~~gillI~DEv~tG~gr~G~----------~~~~~~---------~gv~-----pDiv~~sK~l~gG~~ 347 (514)
+-=++|.+|++|||+++|-||+|- |-..+. .+..+. .+.+ ...-+|||-++-| .
T Consensus 224 errk~iy~LArKyDfLIVeDdpYy-~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPG-l 301 (472)
T KOG0634|consen 224 ERRKKIYQLARKYDFLIVEDDPYY-FLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPG-L 301 (472)
T ss_pred HHHHHHHHHHHHcCEEEEecCccc-eeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCc-c
Confidence 667889999999999999999986 423321 000001 1111 1133799999988 8
Q ss_pred cceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHH-------HHHHHHHHHhhhhhc-c
Q 010250 348 PIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQ-------VNKIAPKFQDGVKAF-S 419 (514)
Q Consensus 348 pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~-------~~~~~~~l~~~L~~l-~ 419 (514)
++|++.+++-+++.+... ....|.+.+.+.+....+.|+...++++.+. ...++..+...|.+. .
T Consensus 302 RlG~it~~~~~l~ril~~-------ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp 374 (472)
T KOG0634|consen 302 RLGWITGNSLFLKRILDL-------AEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLP 374 (472)
T ss_pred eeEEeecCHHHHHHHhhh-------cceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999877776531 2223455566677777777777666544333 334445555555543 2
Q ss_pred CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----------CC-EEEEeCCCCCCHH
Q 010250 420 DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----------GD-NIMMSPPFIMSPE 487 (514)
Q Consensus 420 ~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----------g~-~iRi~p~~~~t~e 487 (514)
..-....+.--|++++++++-...... .......+.+...+.++||.+.++ +. .+|++.. ..+.|
T Consensus 375 ~~~~~~~~P~aGmFiwv~i~~~~~~~~--~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a-~a~~e 451 (472)
T KOG0634|consen 375 KSVCEYHPPKAGMFIWVEIPYINFDTK--KSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIA-FAEPE 451 (472)
T ss_pred CCeeEEecCCcceEEEEEecccccccc--cchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEee-cCCHH
Confidence 221223445568899998862111000 001113445667788999998743 12 5888864 35677
Q ss_pred HHHHHHHHHHHHHHHH
Q 010250 488 EVDELISKYGKALKAT 503 (514)
Q Consensus 488 ~id~~~~~l~~~l~~~ 503 (514)
++++++++|..++++.
T Consensus 452 ~l~~g~~rf~~~ike~ 467 (472)
T KOG0634|consen 452 KLDEGIERFGSVIKEH 467 (472)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999764
No 348
>PLN02452 phosphoserine transaminase
Probab=99.15 E-value=7.9e-09 Score=105.09 Aligned_cols=331 Identities=10% Similarity=0.026 Sum_probs=189.8
Q ss_pred EEEccCCcccccCCCCCHHHHHHHHHHHhcC--------CccccccccCCchHHHHHHHHHHhcCc-CCCCeEEEeCChh
Q 010250 102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTL--------PFYHSFWNRTTKPSLDLAKELLEMFTA-SKMAKVFFTNSGS 172 (514)
Q Consensus 102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~--------~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~~v~~~~sGs 172 (514)
.+.|..|-.. -+++|++++.+.+-+. ..+|+. ....+...+..+.|.+++.- .+.+-+++..|||
T Consensus 8 ~~~f~pGP~~-----lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs-~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt 81 (365)
T PLN02452 8 VFNFSAGPAT-----LPANVLAKAQAELYNWEGSGMSVMEMSHRG-KEFLSIIQKAEADLRELLDIPDNYEVLFLQGGAS 81 (365)
T ss_pred eEeeeCCCCC-----CCHHHHHHHHHHHhcccccCccccccCCCc-hHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccH
Confidence 4456555322 4789999998875331 112211 01125556777888888752 2444455568999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee--cCCCccccCCCCCCCCcccccCCCCcccCCCCCCChh
Q 010250 173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS--LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 250 (514)
Q Consensus 173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~--~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (514)
.++++++.-.. ++++++++...+++|....-.. .+....... ..+..|.. .+.
T Consensus 82 ~~~ea~~~nl~--------~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~------------~~~~~~~~-~~~---- 136 (365)
T PLN02452 82 TQFAAIPLNLC--------KPGDKADFVVTGSWSKKAAKEAKKYCKTNVIAS------------GKDEKYTK-IPS---- 136 (365)
T ss_pred HHHHHHHHhcC--------CCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEe------------cCCCCCCC-CCC----
Confidence 99999987553 2346788888888776322211 111000000 00000000 000
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccC
Q 010250 251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS 330 (514)
Q Consensus 251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~g 330 (514)
++++ . . +.++..|.+-.....+|+...+ ++++. ++++|+|-+++ +| +.....+.++
T Consensus 137 ------~~~~----~-~-~~~~~~v~~~hnETstGv~~~~---~~~i~------~~~lvVDa~Ss-~g--~~pidv~~~~ 192 (365)
T PLN02452 137 ------VSEW----E-L-TPDAKFVHICANETIHGVEFKD---YPDVG------NVPLVADMSSN-FL--SKPVDVSKYG 192 (365)
T ss_pred ------hHHc----C-C-CCCCcEEEECCCCCCCcEecCc---ccccC------CCeEEEECCcc-cc--CcccCHHHcC
Confidence 1222 1 1 1345666666666666774222 44443 38999999998 43 2234455565
Q ss_pred CCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCc----ccccCCCCC-cHHHHHHHHHHHHHHhhc-c---HH
Q 010250 331 IKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS----FSHGFTYSG-HPVSCAVAIEALKIYKER-N---IV 401 (514)
Q Consensus 331 v~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~----~~~~~t~~~-~pl~~aaa~aal~~~~~~-~---~~ 401 (514)
+ |..+--|.+| . ..+|.+++++++.+.+.......-. ....+++.. +-.+..+..++|+.++++ + +.
T Consensus 193 v--~~~saqK~lG-P-~Gl~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~ 268 (365)
T PLN02452 193 V--IYAGAQKNVG-P-SGVTIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAME 268 (365)
T ss_pred E--EEEecccccC-C-CCeEEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHH
Confidence 5 5555569884 3 4589999999998776432111100 112234433 344566666889988764 3 56
Q ss_pred HHHHHHHHHHHhhhhhccCC--CceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CEE
Q 010250 402 EQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNI 476 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l~~~--~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~i 476 (514)
++.+++.+++++.|++.... +.+..-......+.+.+.+.. ..+.|.+.+.++|++..++. ..+
T Consensus 269 ~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~~-----------~~~~f~~~~~~~g~~~~~G~r~~gg~ 337 (365)
T PLN02452 269 KRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGSE-----------LEAEFVKEAAKAGMVQLKGHRSVGGM 337 (365)
T ss_pred HHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCch-----------hHHHHHHHHHHCCCcccCCccccCce
Confidence 78888889999999875222 111100012234455544321 35678999999999986542 239
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 477 MMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 477 Ri~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
|++.--.++.++++.+++.+++.-++
T Consensus 338 R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 338 RASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred EEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 99977788999999999988877543
No 349
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.12 E-value=5.1e-09 Score=109.12 Aligned_cols=289 Identities=16% Similarity=0.111 Sum_probs=160.1
Q ss_pred CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhh-----cCC
Q 010250 117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNA-----LGR 191 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~-----~~~ 191 (514)
-++...+++...+.+.......+........+....+.+++....-..-.||++|||||..|+.+++..+.+ .+.
T Consensus 74 ~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~ 153 (460)
T COG0076 74 VPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGK 153 (460)
T ss_pred CHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 356666777777765332211112234445556666777765433345689999999999999999766532 111
Q ss_pred CCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCc
Q 010250 192 PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPET 271 (514)
Q Consensus 192 ~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~ 271 (514)
+.+...|++....|-+..-+...-|..... ++... . ....|.+++++++.+.....
T Consensus 154 ~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~------------v~~~~-----------~-~~~id~~~l~~~i~~~t~~g 209 (460)
T COG0076 154 PGGKPNIVCSETAHFSFEKAARYLGLGLRR------------VPTVP-----------T-DYRIDVDALEEAIDENTIGG 209 (460)
T ss_pred cCCCCeEEecCcchhHHHHHHHHhCCCcee------------EEecc-----------C-ccccCHHHHHHHHHhhccCc
Confidence 112225666778887765555444432211 00000 0 11233688888887532211
Q ss_pred EEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc-cccceec-ccCC-CCchhchh--hhhcCCc
Q 010250 272 IAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL-GTMFGCD-KYSI-KPDLVSFA--KALSSAY 346 (514)
Q Consensus 272 ~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~-G~~~~~~-~~gv-~pDiv~~s--K~l~gG~ 346 (514)
+|+.--.....|.+-| +++|.++|++||+++++|-++.||-.. -. -... .+++ ..|-++++ |-+-..
T Consensus 210 --~vV~~aGtT~~G~iDd----i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~-~~~~~~f~l~~vdSIt~d~HK~g~aP- 281 (460)
T COG0076 210 --VVVGTAGTTDTGSIDD----IEELADIAEEYGIWLHVDAAFGGFLLPFLE-PDGRWDFGLEGVDSITVDGHKYGLAP- 281 (460)
T ss_pred --eEEEEecCCCCCccCC----HHHHHHHHHHcCCcEEEEccccceeecccC-ccchhhcCCCCceEEEECcccccCCC-
Confidence 2554444555677776 999999999999999999999887321 00 0011 1344 25666655 644444
Q ss_pred ccceeEEeCHH--HHHHhhhccCCCCc-ccccCCCCCcH--HHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHhhhhhc
Q 010250 347 MPIGAILVSPE--VSEVIHSQSNTLGS-FSHGFTYSGHP--VSCAVAIEALKIYKERN---IVEQVNKIAPKFQDGVKAF 418 (514)
Q Consensus 347 ~pig~v~~~~~--i~~~l~~~~~~~~~-~~~~~t~~~~p--l~~aaa~aal~~~~~~~---~~~~~~~~~~~l~~~L~~l 418 (514)
++.|+++.+++ +.+.+.-.....+. .....|..++. -..+++.++++.+..++ +.++.-+..+++.+.|+++
T Consensus 282 ~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~ 361 (460)
T COG0076 282 IGCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKL 361 (460)
T ss_pred CCceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 67888888655 44444321111110 00111212222 24555667777775554 4555668888899888876
Q ss_pred cCCCceeEEEeeeeeEEEEEc
Q 010250 419 SDSPIIGEIRGTGLILGTEFA 439 (514)
Q Consensus 419 ~~~~~~~~v~g~g~~~~i~~~ 439 (514)
....++. .+...++.+.++
T Consensus 362 ~~~e~~~--~p~l~~V~fr~~ 380 (460)
T COG0076 362 GDFELVN--EPELPIVAFRLK 380 (460)
T ss_pred CCcEeec--CCccceEEEEcC
Confidence 2222222 234455666663
No 350
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.07 E-value=1.9e-08 Score=102.43 Aligned_cols=301 Identities=13% Similarity=0.086 Sum_probs=167.9
Q ss_pred chHHHHHHHHHHhcCc-CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCccccee-ee-ecCCCccc
Q 010250 144 KPSLDLAKELLEMFTA-SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI-AA-SLSGLPAL 220 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~-~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~-~~-~~s~~~~~ 220 (514)
+...+..+.|.+++.. .+.+-++++.|||.++|+++.... . .++.++++. + +.|.... .+ ..-|.+
T Consensus 39 ~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~------~-~~g~~vLv~-g-~FG~r~~~eia~~~g~~-- 107 (374)
T TIGR01365 39 EKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSML------G-CRGVDVLAW-E-SFGKGWVTDVTKQLKLP-- 107 (374)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcC------C-CCCCeEEEE-C-HHHHHHHHHHHHhcCCC--
Confidence 4556677888888752 233446668999999999997653 1 133466653 3 4454322 11 111110
Q ss_pred cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHH
Q 010250 221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV 300 (514)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l 300 (514)
.+..+..+ |.... ++++++. ...+..+..| ..+|+..| ++ ++
T Consensus 108 ---------~v~~l~~~--~g~~~-----------~~~~ve~------~~~v~~vhnE---TSTGv~np----v~---~i 149 (374)
T TIGR01365 108 ---------DVRVLEAE--YGKLP-----------DLKKVDF------KNDVVFTWNG---TTSGVRVP----NG---DF 149 (374)
T ss_pred ---------CcEEEcCC--CCCCC-----------CHHHcCC------CCCEEEecCC---Cchheecc----cc---cc
Confidence 01111111 11100 0234431 1234444444 34566766 44 44
Q ss_pred HHh-cCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCC--C-C----
Q 010250 301 VKK-YDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNT--L-G---- 370 (514)
Q Consensus 301 ~~~-~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~--~-~---- 370 (514)
+++ +++++|+|-|-+ +| |..+-.+ + .|+++.| |+|++. -.+|.++.+++.++.......+ . .
T Consensus 150 ~~~~~~~lliVDavSs-~g--~~~l~~d--~--iDv~~tgsQK~L~~p-pGls~v~vs~~Al~~~~~~~~y~~~~~~~~~ 221 (374)
T TIGR01365 150 IPADREGLTICDATSA-AF--AQDLDYH--K--LDVVTFSWQKVLGGE-GAHGMLILSPRAVARLESYTPAWPLPKIFRL 221 (374)
T ss_pred ccccCCCcEEEEccch-hc--CCCCChh--H--CcEEEEechhccCCC-CceEEEEECHHHHHHHhhcCCCCCChhhhcc
Confidence 443 589999998865 54 2233333 2 6777655 999985 3578899999988776532110 0 0
Q ss_pred --------cccccCCCCCcH-HHHHHHHHHHHHHhhc-c---HHHHHHHHHHHHHhhhhhccCCCceeE--EEeeeeeEE
Q 010250 371 --------SFSHGFTYSGHP-VSCAVAIEALKIYKER-N---IVEQVNKIAPKFQDGVKAFSDSPIIGE--IRGTGLILG 435 (514)
Q Consensus 371 --------~~~~~~t~~~~p-l~~aaa~aal~~~~~~-~---~~~~~~~~~~~l~~~L~~l~~~~~~~~--v~g~g~~~~ 435 (514)
....+.|...+| .+..+...+|+.++++ + ..++.+++++.++++++++........ -........
T Consensus 222 ~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~ 301 (374)
T TIGR01365 222 TKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVC 301 (374)
T ss_pred ccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEE
Confidence 001123443333 4555566777766654 3 577888889999999998731222211 111222344
Q ss_pred EEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 436 TEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 436 i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
+.+.+.......-...+.....+...|.++|+.+.++ ++.+||.-.-.++++||+.+++.|+=+..
T Consensus 302 v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 302 LKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFA 372 (374)
T ss_pred EEeCCccccccccchhhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHh
Confidence 4443321100000011223456888999999988753 46799999889999999999999986654
No 351
>PLN02271 serine hydroxymethyltransferase
Probab=99.05 E-value=4.5e-08 Score=102.25 Aligned_cols=281 Identities=14% Similarity=0.072 Sum_probs=152.7
Q ss_pred EEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee-ecCCCccccCCCCCCCCcccccCCCCcccCC
Q 010250 165 VFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA-SLSGLPALHQKFDLPAPFVLHTDCPHYWRYA 243 (514)
Q Consensus 165 v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (514)
|... ||+.||.+++...+ .+.++|+..+..+-|+..-.. ...+...... + -....++++
T Consensus 218 VQp~-SGs~AN~aV~~ALl--------~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~s--G---~~~~~vpY~------ 277 (586)
T PLN02271 218 VQPY-SCTSANFAVYTGLL--------LPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGA--S---IFFESLPYK------ 277 (586)
T ss_pred eeec-cHHHHHHHHHHHhc--------CCCCEEEEecCCCCCchhcccccccccccccc--c---ceEEEEEcc------
Confidence 4444 89999999987664 345789888876655522111 0011000000 0 001111111
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc
Q 010250 244 HPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM 323 (514)
Q Consensus 244 ~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~ 323 (514)
.. ++....+.++++++... .++.+|++...... ...+ +++++++|+++|++|++|-+|. .|-....
T Consensus 278 ~d----~~~g~IDyd~lek~a~~---~rPKLII~g~Sayp--r~~D----~~~i~eIAdevGA~LmvD~AH~-aGLIa~g 343 (586)
T PLN02271 278 VN----PQTGYIDYDKLEEKALD---FRPKILICGGSSYP--REWD----YARFRQIADKCGAVLMCDMAHI-SGLVAAK 343 (586)
T ss_pred cc----cccCccCHHHHHHHhhh---cCCeEEEECchhcc--CcCC----HHHHHHHHHHcCCEEEEECccc-ccccccC
Confidence 00 01112345778875543 45678888664332 2233 8999999999999999999998 4433211
Q ss_pred ceecccCCCCchhchh--hhhcCCcccceeEEeCHH--------------------HHHHhhhccCCCCcccccCCCCCc
Q 010250 324 FGCDKYSIKPDLVSFA--KALSSAYMPIGAILVSPE--------------------VSEVIHSQSNTLGSFSHGFTYSGH 381 (514)
Q Consensus 324 ~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~~~~--------------------i~~~l~~~~~~~~~~~~~~t~~~~ 381 (514)
.....+. ..|+++.+ |+|.|. +-|.++.+++ +.+.+... .|. +..++.
T Consensus 344 ~~~sP~~-~aDvvt~TTHKtLrGP--rGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~a-----VfP--glqgGp 413 (586)
T PLN02271 344 ECVNPFD-YCDIVTSTTHKSLRGP--RGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFA-----VFP--SLQGGP 413 (586)
T ss_pred cCCCCCc-CCcEEEeCCcccCCCC--CceEEEecccccccccCCccccccccccHHHHHHhhcc-----cCC--ccccCh
Confidence 1101111 36888654 999884 3366676654 33333210 111 122222
Q ss_pred HH-HHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHH
Q 010250 382 PV-SCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAY 457 (514)
Q Consensus 382 pl-~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~ 457 (514)
.. ..++-..+++.+.. .+..+++.++.+.|.+.|.+. .+.++..-. ...++.+++..... .+..
T Consensus 414 hn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~-G~~vv~ggT-dnHlvLvDl~~~g~----------~G~~ 481 (586)
T PLN02271 414 HNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRR-KCRLVTGGT-DNHLLLWDLTTLGL----------TGKN 481 (586)
T ss_pred hHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-CCeEeeCCC-CcceeeecCcccCC----------CHHH
Confidence 22 22333334554443 346777888888898888764 444443211 12344455432210 1445
Q ss_pred HHHHHHHCCcEEEe----e------CCEEEEeCCC----CCCHHHHHHHHHHHHHHHH
Q 010250 458 FGAQCEKHGMLVRV----S------GDNIMMSPPF----IMSPEEVDELISKYGKALK 501 (514)
Q Consensus 458 ~~~~l~~~Gv~~~~----~------g~~iRi~p~~----~~t~e~id~~~~~l~~~l~ 501 (514)
..+.|.+-||.+-. . .+.|||.-|. .+.++|++++.+.|.++++
T Consensus 482 ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 482 YEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred HHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 66677777888742 1 2458988764 3466899998888888876
No 352
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.03 E-value=2.5e-07 Score=88.68 Aligned_cols=344 Identities=16% Similarity=0.144 Sum_probs=192.8
Q ss_pred EEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHH-hc-CCccccccccCC----chHHHHHHHHHHhcCcCCCCeEEE
Q 010250 94 VYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQL-NT-LPFYHSFWNRTT----KPSLDLAKELLEMFTASKMAKVFF 167 (514)
Q Consensus 94 ~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l-~~-~~~~~~~~~~~~----~~~~ela~~L~~~~~~~~~~~v~~ 167 (514)
+-+.+|-.|||- ++||-.++.+.+...+.. +. ....-..|+... +....+..+|+-+++ ....+|..
T Consensus 26 f~lp~~viyLdg------nSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiG-A~~~Evvv 98 (407)
T COG3844 26 FALPGGVIYLDG------NSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIG-ARAGEVVV 98 (407)
T ss_pred ccCCCCeEEeec------cccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhc-CCCCceEE
Confidence 455677889985 678865545555544433 22 111111122122 233445555555553 45678888
Q ss_pred eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCccc-ceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCC
Q 010250 168 TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGS-TLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPG 246 (514)
Q Consensus 168 ~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~-t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (514)
++|-+--+...+-.+. ....+.+||++++.-.-. ...+-.+.. .. . .. +
T Consensus 99 ~dtts~nl~k~L~aal------r~~~~r~vIv~E~~~fpTdly~a~g~~~---~~-------~----~~----~------ 148 (407)
T COG3844 99 TDTTSINLFKVLAAAL------RPQEGRRVIVSEGDNFPTDLYIAEGLAD---LL-------G----IG----Y------ 148 (407)
T ss_pred eCCcchHHHHHHHHHh------ccCCCceEEeecCCCCCcchhhhcchhh---hh-------c----cc----c------
Confidence 8876654444444443 112245666666533221 111100000 00 0 00 0
Q ss_pred CChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccccee
Q 010250 247 ETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC 326 (514)
Q Consensus 247 ~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~ 326 (514)
+.+......++++.+. ++++.|++..|+--+|.... +.+|-++++++|++++.|=.|+ .|-. ..
T Consensus 149 ---~~~~~~~P~~~~~~~~----dd~AvV~L~~V~y~TGql~d----m~aiT~~AH~~galv~wDLAHs-aGav----p~ 212 (407)
T COG3844 149 ---DLEGVIAPRALEEAIT----DDVAVVLLSHVNYKTGQLLD----MRAITALAHQHGALVGWDLAHS-AGAV----PV 212 (407)
T ss_pred ---cceeeeChHHHHHhhc----cceEEEEeccccccccceee----HHHHHHHHHhcCceEEeehhcc-cCCc----ce
Confidence 0000011245666554 78999999999999998887 9999999999999999999998 3322 33
Q ss_pred cccCCCCchh--chhhhhcCCcccceeEEeCHHHHHHhhhc-cC---CCCcccccCCC-----------CC-cHHHHHHH
Q 010250 327 DKYSIKPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQ-SN---TLGSFSHGFTY-----------SG-HPVSCAVA 388 (514)
Q Consensus 327 ~~~gv~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~-~~---~~~~~~~~~t~-----------~~-~pl~~aaa 388 (514)
+...-..|.. |-=|-|.||--..+++.+.++..+...+. +. ..++|.....| +. +-+++++.
T Consensus 213 ~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal 292 (407)
T COG3844 213 DLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAAL 292 (407)
T ss_pred eecccCCCeeeeeeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHH
Confidence 3333334544 33487776533345566655544433221 00 00111111111 11 23456666
Q ss_pred HHHHHHHhhc---cHHHHHHHHHHHHHhhhhhc-cCCCc--ee--EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHH
Q 010250 389 IEALKIYKER---NIVEQVNKIAPKFQDGVKAF-SDSPI--IG--EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGA 460 (514)
Q Consensus 389 ~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l-~~~~~--~~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 460 (514)
..+|++..+- +++++.-.+.++|.+.++.. ..+++ .+ .-..+|.-+++..+ .+..+.+
T Consensus 293 ~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp--------------~~~~V~q 358 (407)
T COG3844 293 EGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP--------------HGYQVMQ 358 (407)
T ss_pred hhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC--------------cHHHHHH
Confidence 6788887653 35666666778888777664 22221 11 11223554555443 2566889
Q ss_pred HHHHCCcEEEee-CCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 461 QCEKHGMLVRVS-GDNIMMSP-PFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 461 ~l~~~Gv~~~~~-g~~iRi~p-~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
.|.++||+.-.. .+.|||.| |++.+-+|+=.+++.|++++++..
T Consensus 359 aLi~rGVigD~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~a 404 (407)
T COG3844 359 ALIDRGVIGDFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTLA 404 (407)
T ss_pred HHHHcCccccccCCCeeeecCccceechhHHHHHHHHHHHHHHhhc
Confidence 999999987643 46799987 488999999999999999987643
No 353
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.03 E-value=6.3e-10 Score=109.39 Aligned_cols=247 Identities=19% Similarity=0.196 Sum_probs=137.0
Q ss_pred CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccE
Q 010250 117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 196 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ 196 (514)
.+|++.+|+.+.. ... .. .+..+...++++++++++ +.+.++|+.||+.||..+++... .+...
T Consensus 7 ~~~~m~~a~~~a~-~gd---~~-Yg~D~~~~~l~~~i~~l~---g~e~a~f~~sGT~An~~al~~~~--------~~~~~ 70 (290)
T PF01212_consen 7 PTPAMLEAMAAAN-VGD---DA-YGEDPTTARLEERIAELF---GKEAALFVPSGTMANQLALRAHL--------RPGES 70 (290)
T ss_dssp S-HHEEHHHHHTT-SB----CC-TTSSHHHHHHHHHHHHHH---TSSEEEEESSHHHHHHHHHHHHH--------HTTEE
T ss_pred CCHHHHHHHHccc-cCC---cc-cCCChhHHHHHHHHHHHc---CCCEEEEeCCCChHHHHHHHHHH--------hcCCc
Confidence 6899999994433 221 11 235667789999999998 45788999999999999999775 12345
Q ss_pred EEEEecCCcc--cceeee-ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC--Cc
Q 010250 197 FIARQKSYHG--STLIAA-SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP--ET 271 (514)
Q Consensus 197 ii~~~~~yHG--~t~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~--~~ 271 (514)
||.-+. -|- ...++. .++|.... .++..+ .+..++++|++.+..... .+
T Consensus 71 vi~~~~-aHi~~~E~ga~~~~~G~~~~------------~l~~~~-------------~G~l~~~~l~~~~~~~~~h~~~ 124 (290)
T PF01212_consen 71 VICADT-AHIHFDETGAIEELSGAKLI------------PLPSDD-------------DGKLTPEDLEAAIEEHGAHHPQ 124 (290)
T ss_dssp EEEETT-EHHHHSSTTHHHHHTTCEEE------------EEBECT-------------GTBB-HHHHHHHHHHHTGTSGG
T ss_pred eecccc-ceeeeeccchhhHhcCcEEE------------ECCCcc-------------cCCCCHHHHHHHhhhccccCCC
Confidence 555443 332 222222 22332111 011000 011226889988877443 57
Q ss_pred EEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc--CcccccccceecccCCCCchhch--hhhhcCCcc
Q 010250 272 IAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC--AFGRLGTMFGCDKYSIKPDLVSF--AKALSSAYM 347 (514)
Q Consensus 272 ~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t--G~gr~G~~~~~~~~gv~pDiv~~--sK~l~gG~~ 347 (514)
+++|.+|-.....|-.+++.+.|++|.++|++||+.|++|-+-- .....|.. ..+.. --.|++++ +|.++ .
T Consensus 125 ~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~-~~e~~-~~~D~v~~~~tK~~g---~ 199 (290)
T PF01212_consen 125 PAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVS-LAEIA-AGADSVSFGGTKNGG---A 199 (290)
T ss_dssp EEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHH-HHHHH-TTSSEEEEETTSTT----S
T ss_pred ccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhccccc-HHHHh-hhCCEEEEEEEcccc---c
Confidence 89999998888755567788999999999999999999996521 00001110 01111 23577765 47655 4
Q ss_pred ccee-EEeCHHHHHHhhhccCCCCcccccCCC--CCcHHHH-----HHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc
Q 010250 348 PIGA-ILVSPEVSEVIHSQSNTLGSFSHGFTY--SGHPVSC-----AVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF 418 (514)
Q Consensus 348 pig~-v~~~~~i~~~l~~~~~~~~~~~~~~t~--~~~pl~~-----aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l 418 (514)
|.|+ +++++++++...... . ..|+.. .+ .+++ .+++.+++.. .....+..++.+++.+.|+.+
T Consensus 200 ~~Gavl~~~~~~i~~~~~~~----k-~~gg~~~~~G-~~~a~~~~~~~~l~~l~~~--~~~~~~~~~~A~~La~~l~~~ 270 (290)
T PF01212_consen 200 PGGAVLAGNKEFIAKARRQR----K-RLGGGMRQAG-VLAAAELYQFAALRALELW--LERARHANAMAKRLAAGLEAL 270 (290)
T ss_dssp SSEEEEEESHHHHHHHHHHH----H-HHTHHHHHTT-HHHHHHHHHHHHHCHEECS--HHHHHCHHHHHHCHHHCHHEE
T ss_pred ccceEEEechHHHHHHHHHH----H-HhccCeeecc-eeeeechhhHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHC
Confidence 5555 556888654433210 0 111111 11 1111 0222221110 134566777888888888876
No 354
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.00 E-value=3.4e-07 Score=90.31 Aligned_cols=330 Identities=18% Similarity=0.171 Sum_probs=183.9
Q ss_pred CCHHHHHHHHHHHh-cCCcc---ccccccC--CchHHHHHH-HHHHhcCcCCCCeEEE-eCChhHHHHHHHHHHHHHHhh
Q 010250 117 SEPRLVAAATAQLN-TLPFY---HSFWNRT--TKPSLDLAK-ELLEMFTASKMAKVFF-TNSGSEANDTQVKLVWYYNNA 188 (514)
Q Consensus 117 ~~p~v~~A~~~~l~-~~~~~---~~~~~~~--~~~~~ela~-~L~~~~~~~~~~~v~~-~~sGseA~~~Alk~a~~~~~~ 188 (514)
..|.|++|.-..+. ++... .++|++. .+..++|+- +..++|+ .+.+-. -.||+.||.+++....
T Consensus 38 ~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFg---a~~anVQPhSGs~AN~av~~All----- 109 (413)
T COG0112 38 TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFG---AEYANVQPHSGSQANQAVYLALL----- 109 (413)
T ss_pred CCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhC---CCccccCCCCchHHHHHHHHHHc-----
Confidence 46888888877764 33322 2455543 344445543 4445553 233322 4589999999887664
Q ss_pred cCCCCccEEEEEecCCcccc-ee-eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHH
Q 010250 189 LGRPNKKKFIARQKSYHGST-LI-AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILK 266 (514)
Q Consensus 189 ~~~~~~~~ii~~~~~yHG~t-~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~ 266 (514)
...++|+..+-+.-|+. .+ ..+.+|.- + ..+++|- . .+-...|.+.++++..+
T Consensus 110 ---~pGDtimgm~l~~GGHltHg~~v~~sG~~-~-----------~~v~Y~v------d----~et~~IDyD~~~k~a~e 164 (413)
T COG0112 110 ---QPGDTIMGLDLSHGGHLTHGSPVNFSGKL-F-----------NVVSYGV------D----PETGLIDYDEVEKLAKE 164 (413)
T ss_pred ---CCCCeEecccCCCCCcccCCCCCCcccee-E-----------EeEeccc------c----cccCccCHHHHHHHHHH
Confidence 34578888766554442 22 22222221 0 1111110 0 01122346889998887
Q ss_pred hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhchh--hhhc
Q 010250 267 EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVSFA--KALS 343 (514)
Q Consensus 267 ~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~~s--K~l~ 343 (514)
..|+ .||+=. +..--..+ +++++++|++.|++|.+|-+|- |+--.|. +. .... ..|+||-+ |.|-
T Consensus 165 ~kPK---~ii~G~--SaY~r~id----~~~~reIad~VGA~L~~DmAHiaGLVA~G~-~p-~P~~-~AdvVTtTTHKTlr 232 (413)
T COG0112 165 VKPK---LIIAGG--SAYSRPID----FKRFREIADEVGAYLMVDMAHVAGLIAGGV-HP-NPLP-HADVVTTTTHKTLR 232 (413)
T ss_pred hCCC---EEEECc--cccccccC----HHHHHHHHHHhCceEEehHHHHHHHHhccc-CC-CCCC-ccceEeCCcccCCC
Confidence 6653 333311 11111223 8999999999999999999875 4422221 11 1111 26888654 8999
Q ss_pred CCcccceeEEeCH-HHHHHhhhccCCCCcccccCCCCCcHH-HHHHHHHHHHHHhhc---cHHHHHHHHHHHHHhhhhhc
Q 010250 344 SAYMPIGAILVSP-EVSEVIHSQSNTLGSFSHGFTYSGHPV-SCAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAF 418 (514)
Q Consensus 344 gG~~pig~v~~~~-~i~~~l~~~~~~~~~~~~~~t~~~~pl-~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l 418 (514)
| -+-|.+++++ ++.+.+.+. ..-++.+++-+ ..|+-..++....+. +..+++.++.+.|.+.|.+.
T Consensus 233 G--PrGG~Il~~~eel~kkin~a-------VFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~ 303 (413)
T COG0112 233 G--PRGGIILTNDEELAKKINSA-------VFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER 303 (413)
T ss_pred C--CCceEEEeccHHHHHHhhhh-------cCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc
Confidence 8 4667788874 888888741 11123333322 222222334443333 45677888888888888774
Q ss_pred cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe----e-------CCEEEEeCCCC----
Q 010250 419 SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV----S-------GDNIMMSPPFI---- 483 (514)
Q Consensus 419 ~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~----~-------g~~iRi~p~~~---- 483 (514)
.+.++..-. ...++.+++.+... -++.....|.+-||.+-. . .+.||+.-|..
T Consensus 304 -G~~vvsGgT-dnHl~lVDl~~~~~----------~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG 371 (413)
T COG0112 304 -GFKVVSGGT-DNHLVLVDLRSKGL----------TGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRG 371 (413)
T ss_pred -CCeEecCCc-cceEEEEEcccCCC----------CHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcC
Confidence 333333111 22345556552211 144455667777887752 1 24599988754
Q ss_pred CCHHHHHHHHHHHHHHHHH-------HHHHHHHhhh
Q 010250 484 MSPEEVDELISKYGKALKA-------TEERVKELKS 512 (514)
Q Consensus 484 ~t~e~id~~~~~l~~~l~~-------~~~~~~~~~~ 512 (514)
+.++|..++.+.|.+++.. +++++.+++.
T Consensus 372 ~~e~e~~~Ia~~I~~vl~~~~~~~~~vk~~V~~l~~ 407 (413)
T COG0112 372 FGEAEMEEIADLIADVLDGLKDVPAEVKEEVAELCR 407 (413)
T ss_pred CCHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH
Confidence 4568888888888888763 5555555543
No 355
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.99 E-value=1.3e-07 Score=106.22 Aligned_cols=319 Identities=12% Similarity=0.116 Sum_probs=171.6
Q ss_pred ccCCC-CCHHHHHHHHHHHhcCCcccccc----ccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHH
Q 010250 112 TALGG-SEPRLVAAATAQLNTLPFYHSFW----NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYN 186 (514)
Q Consensus 112 ~~lGh-~~p~v~~A~~~~l~~~~~~~~~~----~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~ 186 (514)
.+.+| -++.|.+++.+..+.+..|+++. .+..+...++...+++++ +.+.+++-++.++|.+.++++...+ .
T Consensus 111 G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~Lt-G~~~anaSL~d~aTAaaea~~~a~~-~- 187 (993)
T PLN02414 111 GYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLT-GLPMSNASLLDEGTAAAEAMAMCNN-I- 187 (993)
T ss_pred CCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHh-CCChhhEeecCChHHHHHHHHHHHh-c-
Confidence 44455 45666688877665433333221 122233456677788876 3456789999999999997765432 1
Q ss_pred hhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHH
Q 010250 187 NALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILK 266 (514)
Q Consensus 187 ~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~ 266 (514)
...++++|++.+..| +.+...+.. +.+..++ .+..++. ++..
T Consensus 188 ---~~g~~~~VlVs~~~h-P~~~~v~~t-----~a~~~Gi---eV~~v~~---------------------~~~~----- 229 (993)
T PLN02414 188 ---LKGKKKKFLIASNCH-PQTIDVCQT-----RADGLGL---EVVVADE---------------------KDFD----- 229 (993)
T ss_pred ---ccCCCCEEEEcCccC-HhHHHHHHH-----hhhhcCC---EEEEecc---------------------hhhc-----
Confidence 111345676665555 433222210 0011110 0111111 1100
Q ss_pred hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hh---
Q 010250 267 EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KA--- 341 (514)
Q Consensus 267 ~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~--- 341 (514)
...+.+++++ -.+++..|.+.| +++|.++|+++|+++++ -++. ++-.+- ...-.+..|+++.+ |.
T Consensus 230 ~~~~~v~~vl-vq~P~~~G~v~d----v~~I~~~ah~~GaL~iV-aad~-lal~~l---~~pge~GADi~vgsgqKwg~P 299 (993)
T PLN02414 230 YSSGDVCGVL-VQYPATDGEVLD----YAEFVKNAHANGVKVVM-ATDL-LALTML---KPPGEWGADIVVGSAQRFGVP 299 (993)
T ss_pred cccCceEEEE-EecCCCCeEEcC----HHHHHHHHHHcCCEEEE-EECH-HHhcCC---CCHhhccCcEEEECCCccccC
Confidence 0123566665 345556788877 99999999999999999 3332 221110 01112345887643 32
Q ss_pred hcCCcccceeEEeCHHHHHHhhhc--cCCC---C--cc--------ccc--CCCCCcH---HHHHHHHHHH--HHHhhc-
Q 010250 342 LSSAYMPIGAILVSPEVSEVIHSQ--SNTL---G--SF--------SHG--FTYSGHP---VSCAVAIEAL--KIYKER- 398 (514)
Q Consensus 342 l~gG~~pig~v~~~~~i~~~l~~~--~~~~---~--~~--------~~~--~t~~~~p---l~~aaa~aal--~~~~~~- 398 (514)
+++|+-..|++++++++...+... ++.. + .+ .|. -....|. .++.+++++. ..+...
T Consensus 300 ~G~GGP~aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~G 379 (993)
T PLN02414 300 MGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEG 379 (993)
T ss_pred CCCCCCCeeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhcccc
Confidence 332323488899999886644310 0000 0 00 000 0001122 2333333332 222222
Q ss_pred --cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCE
Q 010250 399 --NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDN 475 (514)
Q Consensus 399 --~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~ 475 (514)
++.+++..+..+++++|+++ ...+... .-.+ .+.+.+. . ...+.++|.++||.++.. ++.
T Consensus 380 l~~Ia~ri~~la~~l~~~L~~~-G~~~~~~-~~f~-~vt~~~~--~------------~~~v~~~L~~~gI~l~~~~~~~ 442 (993)
T PLN02414 380 LKTIAQRVHGLAGVFAAGLKKL-GFQVQSL-PFFD-TVKVKCS--D------------ADAIADAAAKVGINLRVVDANT 442 (993)
T ss_pred HHHHHHHHHHHHHHHHHHHhhc-CCccCCC-CCcC-eEEEecC--C------------HHHHHHHHHHCCCeeEEecCCe
Confidence 45678888999999999764 2222211 0011 2223321 1 245788999999998865 467
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHH
Q 010250 476 IMMSPPFIMSPEEVDELISKYGK 498 (514)
Q Consensus 476 iRi~p~~~~t~e~id~~~~~l~~ 498 (514)
+|+++....|++|||.++++|..
T Consensus 443 lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 443 VTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred EEEEeeccCCHHHHHHHHHHHcc
Confidence 99999999999999999999963
No 356
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.98 E-value=8.9e-08 Score=96.59 Aligned_cols=318 Identities=13% Similarity=0.098 Sum_probs=179.0
Q ss_pred CHHHHHHHHHHHhcCC--------ccccccccCCchHHHHHHHHHHhcCc-CCCCeEEEeCChhHHHHHHHHHHHHHHhh
Q 010250 118 EPRLVAAATAQLNTLP--------FYHSFWNRTTKPSLDLAKELLEMFTA-SKMAKVFFTNSGSEANDTQVKLVWYYNNA 188 (514)
Q Consensus 118 ~p~v~~A~~~~l~~~~--------~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~~v~~~~sGseA~~~Alk~a~~~~~~ 188 (514)
+++|++++++.+-+.. .+|+. ....+...+..+.|.+++.- .+.+-+++..|||.+.++++.-..
T Consensus 16 p~~Vl~~~~~~~~~~~~~g~si~eisHRs-~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll----- 89 (364)
T PRK12462 16 PDTVLEQVRQAVVELPETGLSVLGMSHRS-SWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFS----- 89 (364)
T ss_pred CHHHHHHHHHHHhcccccCcccccccccc-HHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcC-----
Confidence 7889999887775421 12221 11134556677778887742 234334445569999998886553
Q ss_pred cCCCCccEEE-EEecCCcccceeeee-cCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHH
Q 010250 189 LGRPNKKKFI-ARQKSYHGSTLIAAS-LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILK 266 (514)
Q Consensus 189 ~~~~~~~~ii-~~~~~yHG~t~~~~~-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~ 266 (514)
.++++++ +...+++|....... .-+.. ..... ..+..|.. .|. .+++ +
T Consensus 90 ---~~g~~~~~~~~tG~fg~r~~~ea~~~g~v--~~~~~---------~~~~~~~~-~p~----------~~~~-----~ 139 (364)
T PRK12462 90 ---RPGAAAPEYVTTGYWSRKAIGEASRVAAM--RVVWD---------GAASGYRT-LPS----------LAEL-----D 139 (364)
T ss_pred ---CCCCcEEEEEeCCHHHHHHHHHHHhcCCc--eEecC---------cCCCCCCc-CCC----------HHHh-----c
Confidence 2234455 666777675321111 00100 00000 00000000 000 1221 1
Q ss_pred hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcC
Q 010250 267 EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSS 344 (514)
Q Consensus 267 ~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~g 344 (514)
.. ++...|.+-.....+|+..+ ++.+.+++++|+|-+=+ + .+..+-++.| |++..| |+|+
T Consensus 140 ~~-~d~~~v~~t~NETstGv~~~---------~~~~~~~~llvvD~sS~-~--~s~pid~~~~----dvi~agsQKnlg- 201 (364)
T PRK12462 140 WD-ARAPFRHYVSNETVEGLQFP---------DAAGLPDSPLIADMSSD-F--MSRPFDVEAY----GMVYAHAQKNLG- 201 (364)
T ss_pred cC-CCCcEEEEccCCCCceEecC---------cccccCCCeEEEEcCch-h--hCCCCChHHc----cEEEeeccccCC-
Confidence 11 24556666666666677765 22233699999998865 4 2223444444 777665 9997
Q ss_pred CcccceeEEeCHHHHHHhhhccCCC-C---cccccCCCCCcH-HHHHHHHHHHHHHhhc--c---HHHHHHHHHHHHHhh
Q 010250 345 AYMPIGAILVSPEVSEVIHSQSNTL-G---SFSHGFTYSGHP-VSCAVAIEALKIYKER--N---IVEQVNKIAPKFQDG 414 (514)
Q Consensus 345 G~~pig~v~~~~~i~~~l~~~~~~~-~---~~~~~~t~~~~p-l~~aaa~aal~~~~~~--~---~~~~~~~~~~~l~~~ 414 (514)
. ..++.++.+++.++........+ . .....+++...| ...-+...+|+.+.++ + +.++.+++++.+++.
T Consensus 202 P-~Gltvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~ 280 (364)
T PRK12462 202 P-AGVTVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYAT 280 (364)
T ss_pred C-CceEEEEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 4 56888999999987765311000 0 001234554444 4566666888988766 4 467778888889988
Q ss_pred hhhcc-CCCceeEEEeeeeeE-EEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CEEEEeCCCCCCHHHH
Q 010250 415 VKAFS-DSPIIGEIRGTGLIL-GTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNIMMSPPFIMSPEEV 489 (514)
Q Consensus 415 L~~l~-~~~~~~~v~g~g~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~iRi~p~~~~t~e~i 489 (514)
+++.. -+....+..-++.|. .|.+.+. .+...|.+.+.++|+....+. +.+|.+.--.++.|++
T Consensus 281 id~~~~~~~~~~~~~~RS~mnv~f~~~~~-----------~l~~~f~~~a~~~gl~~lkGhr~vgg~Ras~yna~~~e~v 349 (364)
T PRK12462 281 LDALNEVIDCHAHRAARSTMNVAFRFRQP-----------RLDTLFKEQSTEAGFCGLSGHRSIGGIRASLYNAVSEQAV 349 (364)
T ss_pred HHhCCCcccCCCChhhcCcceEEEEcCCH-----------HHHHHHHHHHHHCCCccccCCcccCceEEEcCCCCCHHHH
Confidence 88763 222222222333332 2233221 246678899999999875321 3499997778899999
Q ss_pred HHHHHHHHHHHH
Q 010250 490 DELISKYGKALK 501 (514)
Q Consensus 490 d~~~~~l~~~l~ 501 (514)
+.+++-+++.-+
T Consensus 350 ~~L~~fm~~f~~ 361 (364)
T PRK12462 350 SRLCAFLKDFAI 361 (364)
T ss_pred HHHHHHHHHHHH
Confidence 999998887654
No 357
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=98.96 E-value=4e-08 Score=98.34 Aligned_cols=191 Identities=17% Similarity=0.233 Sum_probs=123.3
Q ss_pred chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCC
Q 010250 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK 223 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~ 223 (514)
+....+++.++++- +...++.++||..|...|+.... +...+|+.++..|.|....... +...
T Consensus 77 Pt~~~le~~iaal~---ga~~~l~fsSGmaA~~~al~~L~--------~~g~~iV~~~~~Y~gT~~~l~~------~~~~ 139 (409)
T KOG0053|consen 77 PTRDVLESGIAALE---GAAHALLFSSGMAAITVALLHLL--------PAGDHIVATGDVYGGTLRILRK------FLPK 139 (409)
T ss_pred CchHHHHHHHHHHh---CCceEEEecccHHHHHHHHHHhc--------CCCCcEEEeCCCcccHHHHHHH------HHHH
Confidence 34456778888875 44579999999999999998765 5667899999999886311110 0001
Q ss_pred CCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh
Q 010250 224 FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK 303 (514)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~ 303 (514)
|+....+ .+.++++++..... +++.+|++|.+-++...++. +++|+++|++
T Consensus 140 ~gie~~~------------------------vd~~~~~~~~~~i~-~~t~~V~~ESPsNPll~v~D----I~~l~~la~~ 190 (409)
T KOG0053|consen 140 FGGEGDF------------------------VDVDDLKKILKAIK-ENTKAVFLESPSNPLLKVPD----IEKLARLAHK 190 (409)
T ss_pred hCceeee------------------------echhhHHHHHHhhc-cCceEEEEECCCCCcccccc----HHHHHHHHhh
Confidence 1111010 11234444333322 37899999999888877766 9999999999
Q ss_pred cCCEEEEechhcCcccccccceecccCCCCchhch--hhhhcCCcc-cceeEEeC-HHHHHHhhhccCCCCcccccCCCC
Q 010250 304 YDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSAYM-PIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYS 379 (514)
Q Consensus 304 ~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~--sK~l~gG~~-pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~ 379 (514)
+|+++|+|+...+. .-++.+..-.|||+- .|-|+|.-= -.|.++.+ +++...+... ...--+.
T Consensus 191 ~g~~vvVDnTf~~p------~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~-------~~~lg~~ 257 (409)
T KOG0053|consen 191 YGFLVVVDNTFGSP------YNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFL-------QEDLGWC 257 (409)
T ss_pred CCCEEEEeCCcCcc------cccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHH-------HHHhcCC
Confidence 99999999987643 234555555899964 598988422 23455554 7777766531 1222345
Q ss_pred CcHHHHHHHHHHHH
Q 010250 380 GHPVSCAVAIEALK 393 (514)
Q Consensus 380 ~~pl~~aaa~aal~ 393 (514)
.+|..|.-....++
T Consensus 258 ~~p~~~~ll~Rglk 271 (409)
T KOG0053|consen 258 EDPFDLFLLSRGLK 271 (409)
T ss_pred CCHHHHHHHhcCcc
Confidence 67777766555444
No 358
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=98.93 E-value=3.8e-08 Score=99.65 Aligned_cols=239 Identities=18% Similarity=0.203 Sum_probs=139.3
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
++....|++.++++= +-+.++.++||..|+.+++.... ...++|+..+..|.|........ .+
T Consensus 62 nPT~~~lE~~~a~LE---g~~~~~afsSGmaAI~~~~l~ll--------~~GD~vl~~~~~YG~t~~~~~~~------l~ 124 (396)
T COG0626 62 NPTRDALEEALAELE---GGEDAFAFSSGMAAISTALLALL--------KAGDHVLLPDDLYGGTYRLFEKI------LQ 124 (396)
T ss_pred CccHHHHHHHHHHhh---CCCcEEEecCcHHHHHHHHHHhc--------CCCCEEEecCCccchHHHHHHHH------HH
Confidence 445678889998874 45679999999999999876654 33588999988887753211110 01
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
.+++...+ ++ +. +.+.+++.+. ++++.+|++|+.-|..-.++. +++|.++|+
T Consensus 125 ~~gi~~~~---~d---------~~---------~~~~~~~~~~---~~~tk~v~lEtPsNP~l~v~D----I~~i~~~A~ 176 (396)
T COG0626 125 KFGVEVTF---VD---------PG---------DDEALEAAIK---EPNTKLVFLETPSNPLLEVPD----IPAIARLAK 176 (396)
T ss_pred hcCeEEEE---EC---------CC---------ChHHHHHHhc---ccCceEEEEeCCCCccccccc----HHHHHHHHH
Confidence 12111000 00 00 0123333333 247899999999888777776 999999999
Q ss_pred hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCc-ccceeEEeCH-HHHHHhhhccCCCCcccccCCC
Q 010250 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAY-MPIGAILVSP-EVSEVIHSQSNTLGSFSHGFTY 378 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~-~pig~v~~~~-~i~~~l~~~~~~~~~~~~~~t~ 378 (514)
++|+++|+|.+.... ..++.+..-.||++ ..|-++|.. .-.|+++++. ++.+.+... ... ....
T Consensus 177 ~~g~~vvVDNTfatP------~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~-----~~~-~~G~ 244 (396)
T COG0626 177 AYGALVVVDNTFATP------VLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFA-----QRA-NTGA 244 (396)
T ss_pred hcCCEEEEECCcccc------cccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHH-----HHh-hcCC
Confidence 999999999987632 23444444578886 559888842 2234455454 455544211 001 0112
Q ss_pred CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEcc
Q 010250 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD 440 (514)
Q Consensus 379 ~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~ 440 (514)
..+|..+-..+..|+.+.- ..++..+++..+.+.|++-. -+|... ...|.|.++.|++..
T Consensus 245 ~l~p~dA~l~lRGlkTL~~--Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~ 319 (396)
T COG0626 245 VLSPFDAWLLLRGLRTLAL--RMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKN 319 (396)
T ss_pred CCCHHHHHHHHhccchHHH--HHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCC
Confidence 2346655555555554421 13444455555555554421 122111 123578899999976
No 359
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.90 E-value=4e-07 Score=102.76 Aligned_cols=285 Identities=12% Similarity=0.135 Sum_probs=158.4
Q ss_pred chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCC-ccEEEEEecCCcccceeeeecCCCccccC
Q 010250 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPN-KKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~-~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
+...++...+++++ +.+..++.+..++|.+.++++... .++ ++ +++|++.+..| ..+...+... .+
T Consensus 121 eal~~~Qt~la~Lt-G~~~anaSl~d~aTAa~ea~~~a~-~~~-----~~~~~~vlv~~~~h-P~~~~v~~t~-----a~ 187 (954)
T PRK05367 121 EALLNFQTMVADLT-GLEIANASLLDEATAAAEAMALAK-RVS-----KSKSNRFFVDDDVH-PQTLDVLRTR-----AE 187 (954)
T ss_pred HHHHHHHHHHHHHH-CCChhhccccccHHHHHHHHHHhh-hhc-----cCCCCEEEEcCccC-HHHHHHHHHH-----HH
Confidence 34445667788876 345567889999999999665433 221 22 35677766555 4332221100 00
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
..+. .+..++.+ ++++ .++++++++ .+++..|.+.+ +++|.++|+
T Consensus 188 ~~G~---ev~~~~~~--------------------~d~~-------~~~~~~vlv-q~p~~~G~i~d----~~~i~~~ah 232 (954)
T PRK05367 188 PLGI---EVVVGDAA--------------------KALD-------HDDVFGVLL-QYPGTSGEVRD----YTALIAAAH 232 (954)
T ss_pred hCCC---EEEEecCc--------------------cCCC-------cccEEEEEE-ecCCCCeeecc----HHHHHHHHH
Confidence 0110 01111110 0111 235666544 45677888886 999999999
Q ss_pred hcCCEEEEechhcCcccccccceecccCCCCchhchh--hh---hcCCcccceeEEeCHHHHHHhhhccCC-----CC--
Q 010250 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KA---LSSAYMPIGAILVSPEVSEVIHSQSNT-----LG-- 370 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~---l~gG~~pig~v~~~~~i~~~l~~~~~~-----~~-- 370 (514)
++|+++++|-.+..++.. + ..-.+..|+++.+ |. ++.|+-..|++.+++++...+...--. .+
T Consensus 233 ~~Gal~~vda~~~Al~~l-~----~pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~ 307 (954)
T PRK05367 233 ARGALVAVAADLLALTLL-T----PPGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNP 307 (954)
T ss_pred HcCCEEEEEehhhhccCC-C----ChhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCc
Confidence 999999999866322111 1 1112345777543 42 333334488889999887776431000 00
Q ss_pred -------------cccccCCCCCcHHHHHHHHHH--HHHHhhc---cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeee
Q 010250 371 -------------SFSHGFTYSGHPVSCAVAIEA--LKIYKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGL 432 (514)
Q Consensus 371 -------------~~~~~~t~~~~pl~~aaa~aa--l~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~ 432 (514)
.+..+...-....+..+..++ +..+..+ ++.+++..+..+++++|+.. ...+..... .+
T Consensus 308 ~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~-G~~~~~~~~-f~- 384 (954)
T PRK05367 308 ALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRAL-GLEVVHDSF-FD- 384 (954)
T ss_pred ccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc-CcccCCCCC-CC-
Confidence 011111011112222223332 2333333 45677888889999988763 222221110 01
Q ss_pred eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCEEEEeCCCCCCHHHHHHHHHHHH
Q 010250 433 ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIMMSPPFIMSPEEVDELISKYG 497 (514)
Q Consensus 433 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~iRi~p~~~~t~e~id~~~~~l~ 497 (514)
.+.+.+. . ....+.++|.++||.++.. ++.+|++|....|++|||.++++|.
T Consensus 385 ~~~~~~~--~-----------~~~~i~~~l~~~gi~~~~~~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 385 TLTVEVG--G-----------DAAAVLARALAAGINLRRVDDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred eEEEeCC--C-----------CHHHHHHHHHHCCceeccccCCEEEEEecccCCHHHHHHHHHHHc
Confidence 1122221 0 1456889999999999765 5679999999999999999999997
No 360
>PRK15029 arginine decarboxylase; Provisional
Probab=98.87 E-value=6.9e-07 Score=97.85 Aligned_cols=231 Identities=16% Similarity=0.164 Sum_probs=125.2
Q ss_pred chHHHHHHHHHHhcCcCCCCeEEEe-CChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-ccc
Q 010250 144 KPSLDLAKELLEMFTASKMAKVFFT-NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALH 221 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~~~~~~v~~~-~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~~~ 221 (514)
.+..+..+..++.| +.++.+|. |+.|.+|.+++..+. ++.+.|.++.+.|-+...++.++|.. .|-
T Consensus 205 G~I~eAq~~aA~~f---gA~~t~FlvNGST~gn~a~i~a~~---------~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl 272 (755)
T PRK15029 205 GAFGESEKYAARVF---GADRSWSVVVGTSGSNRTIMQACM---------TDNDVVVVDRNCHKSIEQGLILTGAKPVYM 272 (755)
T ss_pred cHHHHHHHHHHHHh---CCCcEEEEeCChhHHHHHHHHHhc---------CCCCEEEeecccHHHHHHHHHHcCCeEEEe
Confidence 34455566666666 44567665 555555555554442 23345667788888888888877753 322
Q ss_pred CCCCCCCCcccccCCCCcccCCCCCC-ChhHHHHHHHHHHHHHHHHhCCCc--------EEEEEEccccCCCCcccCChh
Q 010250 222 QKFDLPAPFVLHTDCPHYWRYAHPGE-TEEEYSTRLANNLEDLILKEGPET--------IAAFIAEPVIGAGGVIPPPAT 292 (514)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~le~li~~~~~~~--------~aavivEpv~~~~G~~~p~~~ 292 (514)
.+ ... ++...+. +...+ ..+.+++.+.+. ++. .++|++.|.+- |+...
T Consensus 273 ~P------~~~--------~~Gi~~~i~~~~~---~~e~i~~~l~~~-p~~k~~~~~~~~avvlt~PTY~--Gv~~d--- 329 (755)
T PRK15029 273 VP------SRN--------RYGIIGPIYPQEM---QPETLQKKISES-PLTKDKAGQKPSYCVVTNCTYD--GVCYN--- 329 (755)
T ss_pred cc------ccc--------ccCCccCCCcccc---CHHHHHHHHHhC-chhhhccccCceEEEEECCCCc--ceeeC---
Confidence 11 000 0011110 00011 135666666542 222 26777777653 55554
Q ss_pred HHHHHHHHHHhcCCEEEEechhcCccccccccee-ccc-----C-CCCc-hhchh--hhhcCCcccc-eeEEeCHH---H
Q 010250 293 YFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC-DKY-----S-IKPD-LVSFA--KALSSAYMPI-GAILVSPE---V 358 (514)
Q Consensus 293 ~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~-~~~-----g-v~pD-iv~~s--K~l~gG~~pi-g~v~~~~~---i 358 (514)
+++|.++|+++|+.|++||++.+.-+.+..+.. ... . ..+| +++-| |-|++ +.- +.+-.+.. +
T Consensus 330 -i~~I~~~~h~~~~~llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~a--lTQaS~LHv~~~~~~i 406 (755)
T PRK15029 330 -AKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA--LSQASYIHVREGRGAI 406 (755)
T ss_pred -HHHHHHHHHhcCCeEEEECccccccccCccccccccccccccccCCCceEEEEchhhcccc--hhhhhhheeCCCcccc
Confidence 899999999999999999999755444443321 111 1 3477 66545 76654 222 23333221 1
Q ss_pred -HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhc
Q 010250 359 -SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAF 418 (514)
Q Consensus 359 -~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l 418 (514)
.+.+.. .+..-.|.+.+-+-+|..-.+...++. +.+.++..+....+++.++++
T Consensus 407 d~~r~~~------~l~~~qSTSPSY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~ 464 (755)
T PRK15029 407 NFSRFNQ------AYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARL 464 (755)
T ss_pred CHHHHHH------HHHHHcCCCcHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 122321 112223555665555555555555553 246777777888888888765
No 361
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.85 E-value=1.3e-07 Score=96.86 Aligned_cols=245 Identities=20% Similarity=0.196 Sum_probs=134.7
Q ss_pred chHHHHHHHHHHhcCcCC------CCeEEEeCChhHHHHHHHHHHHHHHhh----cCCC-CccEEEEEecCCcccceeee
Q 010250 144 KPSLDLAKELLEMFTASK------MAKVFFTNSGSEANDTQVKLVWYYNNA----LGRP-NKKKFIARQKSYHGSTLIAA 212 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~~~------~~~v~~~~sGseA~~~Alk~a~~~~~~----~~~~-~~~~ii~~~~~yHG~t~~~~ 212 (514)
....++.+.++++++... ...-+|+++|||||..|+.+||..... .+.. ..+.+|+.+..-|-+...+.
T Consensus 79 ~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa 158 (373)
T PF00282_consen 79 EIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAA 158 (373)
T ss_dssp HHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHH
T ss_pred cchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhc
Confidence 334455566666664320 135789999999999999999754321 1111 23456677776676655554
Q ss_pred ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC-C-cEEEEEEccccCCCCcccCC
Q 010250 213 SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP-E-TIAAFIAEPVIGAGGVIPPP 290 (514)
Q Consensus 213 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~-~-~~aavivEpv~~~~G~~~p~ 290 (514)
..-|.. +..+++...++ .+.++|++.+.+... . .+.+|+..--....|.+-|
T Consensus 159 ~~lGlg------------~~~I~~~~~~~-------------md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~- 212 (373)
T PF00282_consen 159 RILGLG------------VRKIPTDEDGR-------------MDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP- 212 (373)
T ss_dssp HHTTSE------------EEEE-BBTTSS-------------B-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S-
T ss_pred ceeeeE------------EEEecCCcchh-------------hhHHHhhhhhcccccccccceeeeccCCCcccccccC-
Confidence 444432 22233322222 125788887765322 2 3434555444555687866
Q ss_pred hhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCC-Cchhch--hhhhcCCcccceeEEeCHH-H-HHHhhhc
Q 010250 291 ATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK-PDLVSF--AKALSSAYMPIGAILVSPE-V-SEVIHSQ 365 (514)
Q Consensus 291 ~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~-pDiv~~--sK~l~gG~~pig~v~~~~~-i-~~~l~~~ 365 (514)
+++|.++|++|++++++|-++.|....-+..-.-..++. .|-+++ -|.+.-. ++.|+++.+++ . .+.+...
T Consensus 213 ---l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P-~~~~~~l~r~~~~l~~~~~~~ 288 (373)
T PF00282_consen 213 ---LEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVP-YGCGVLLVRDKSDLRDAFSIN 288 (373)
T ss_dssp ---HHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-S-SS-EEEEESSGGGHHGGGEEE
T ss_pred ---HHHHhhhccccceeeeecccccccccccccccccccccccccccccchhhhhcCC-ccceeEEeecccchHHHhccC
Confidence 999999999999999999999874222111111223432 455554 4888777 68899988764 3 3333221
Q ss_pred cCCCCcc---------cccCCCCCc-HHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHhhhhhc
Q 010250 366 SNTLGSF---------SHGFTYSGH-PVSCAVAIEALKIYKERNI---VEQVNKIAPKFQDGVKAF 418 (514)
Q Consensus 366 ~~~~~~~---------~~~~t~~~~-pl~~aaa~aal~~~~~~~~---~~~~~~~~~~l~~~L~~l 418 (514)
..+.... ....|..++ .........+|+.+..+++ .++.-++.++|.+.|++.
T Consensus 289 ~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~ 354 (373)
T PF00282_consen 289 ADYLGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKD 354 (373)
T ss_dssp ETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred hhhhcccccccccccccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 1111100 011223322 3444555666776655544 556666778888888765
No 362
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=98.84 E-value=1.8e-07 Score=95.05 Aligned_cols=207 Identities=19% Similarity=0.176 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCc
Q 010250 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPD 334 (514)
Q Consensus 256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pD 334 (514)
|.+.++++..+..| ..||+.+..-. ...+ +++++++|++.|++|++|-.|. |+--.| .+ ...+.. .|
T Consensus 157 D~d~l~~~a~~~kP---klIi~G~S~y~---~~~d---~~~~reIad~vga~l~~D~sH~~GLIa~g-~~-~~P~~~-AD 224 (399)
T PF00464_consen 157 DYDELEKLAKEHKP---KLIICGASSYP---RPID---FKRFREIADEVGAYLMADISHIAGLIAGG-LF-PNPFPY-AD 224 (399)
T ss_dssp -HHHHHHHHHHH-----SEEEEE-SSTS---S------HHHHHHHHHHTT-EEEEE-TTTHHHHHTT-SS---GCCT-SS
T ss_pred CHHHHHHHHhhcCC---CEEEECchhcc---CccC---HHHHHHHHHhcCcEEEecccccccceehh-ee-cCcccc-ce
Confidence 46888888877654 46777654321 2222 7999999999999999999987 442222 22 123332 69
Q ss_pred hhchh--hhhcCCcccceeEEeC--------------HHHHHHhhhccCCCCcccccCCCCCc-HHHHHHHHHHHHHHhh
Q 010250 335 LVSFA--KALSSAYMPIGAILVS--------------PEVSEVIHSQSNTLGSFSHGFTYSGH-PVSCAVAIEALKIYKE 397 (514)
Q Consensus 335 iv~~s--K~l~gG~~pig~v~~~--------------~~i~~~l~~~~~~~~~~~~~~t~~~~-pl~~aaa~aal~~~~~ 397 (514)
++|.+ |.|.| -+-|.++++ +++.+.+... ... +..+++ .-..++-..++....+
T Consensus 225 vvt~sThKtl~G--PrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~a------vfP-~~qg~~h~~~iaalAval~ea~~ 295 (399)
T PF00464_consen 225 VVTGSTHKTLRG--PRGGIILTNKGSKNVDKKGKEIDEELAEKIDSA------VFP-GLQGGPHMHRIAALAVALKEALS 295 (399)
T ss_dssp EEEEESSGGG-S--SS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHH------HTT-TT-SS--HHHHHHHHHHHHHHTS
T ss_pred EEEeeccccccc--cCceEEEEcCCccccCCcccccHHHHHHHhccc------cCC-CcccCcchhHHHHHHHHHhcccC
Confidence 99766 99998 466788888 7888888752 111 122222 2222322234444332
Q ss_pred ---ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--
Q 010250 398 ---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-- 472 (514)
Q Consensus 398 ---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-- 472 (514)
.+..+++.++.+.|.+.|.+. .+.++... -...++.+++..... -+....+.|.+.||.+...
T Consensus 296 ~~fk~Ya~qVv~NAk~La~~L~~~-G~~v~~gg-Td~H~vlvd~~~~~~----------~g~~a~~~Le~~gI~vnkn~i 363 (399)
T PF00464_consen 296 PEFKEYAKQVVKNAKALAEALQER-GFKVVTGG-TDNHQVLVDLRSFGI----------DGKEAEKALEEAGIIVNKNTI 363 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT-T-EEGGGS--SSSEEEEEGGGGTS-----------HHHHHHHHHHTTEE-EEE--
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhC-CcEEEECC-CCCCeEEEEeccccc----------chHHHHHHHHhcCeeeccccc
Confidence 356778888999999999875 33333211 123345566543211 1455667888999998632
Q ss_pred --------CCEEEEeCC----CCCCHHHHHHHHHH
Q 010250 473 --------GDNIMMSPP----FIMSPEEVDELISK 495 (514)
Q Consensus 473 --------g~~iRi~p~----~~~t~e~id~~~~~ 495 (514)
.+.|||.-+ ....++|+.++.+.
T Consensus 364 P~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~ 398 (399)
T PF00464_consen 364 PGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAEL 398 (399)
T ss_dssp TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHHH
T ss_pred CCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhh
Confidence 246999855 23456666665544
No 363
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=98.77 E-value=1.1e-07 Score=97.18 Aligned_cols=230 Identities=17% Similarity=0.220 Sum_probs=130.8
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeC-ChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-c
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTN-SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-A 219 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~-sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~ 219 (514)
+.....+..+..++.| +.++.+|.. +.|.+|.+++..+. ++.+.|.++.+-|-+...++.++|.. .
T Consensus 64 p~G~I~eAe~~aA~~f---GAd~t~flvnGsT~g~~a~i~a~~---------~~gd~VLv~RN~HkSv~~alil~ga~Pv 131 (417)
T PF01276_consen 64 PEGIIKEAEELAARAF---GADKTFFLVNGSTSGNQAMIMALC---------RPGDKVLVDRNCHKSVYNALILSGAIPV 131 (417)
T ss_dssp TBTHHHHHHHHHHHHH---TESEEEEESSHHHHHHHHHHHHHT---------TTTCEEEEETT--HHHHHHHHHHTEEEE
T ss_pred CccHHHHHHHHHHHhc---CCCeEEEEecCchHHHHHHHHHhc---------CCCCEEEEcCCcHHHHHHHHHHcCCeEE
Confidence 5566778888888888 456777755 45555666665553 23345666778888877777777642 2
Q ss_pred cc----CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEE---EEEEccccCCCCcccCChh
Q 010250 220 LH----QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIA---AFIAEPVIGAGGVIPPPAT 292 (514)
Q Consensus 220 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~a---avivEpv~~~~G~~~p~~~ 292 (514)
|- ..++...+ .+.+++. .+.+++.+.+. ++..+ +||+.|.+- |+...
T Consensus 132 yi~p~~~~~gi~~~-----------------i~~~~~~---~~~i~~~l~~~-p~~k~~~~vvlt~PTY~--Gv~~d--- 185 (417)
T PF01276_consen 132 YIPPEDNEYGIIGG-----------------ISPDEFN---EEDIEEALKEH-PDAKAPRLVVLTSPTYY--GVCYD--- 185 (417)
T ss_dssp EEEEEE-TTS-BEE-----------------B-GGGGS---HHHHHHHHHHC-TTCHCESEEEEESS-TT--SEEE----
T ss_pred EecCCccccCCccC-----------------CChhhhh---HHHHHHHHHhC-ccccCceEEEEeCCCCC--eEEEC---
Confidence 22 11221111 0011111 26777777654 34444 777777653 66666
Q ss_pred HHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCc-------hhchh--hhhcCCcccceeEEeCHH--H-HH
Q 010250 293 YFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPD-------LVSFA--KALSSAYMPIGAILVSPE--V-SE 360 (514)
Q Consensus 293 ~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pD-------iv~~s--K~l~gG~~pig~v~~~~~--i-~~ 360 (514)
+++|.++|+++++.|++||++.+.-... .+.........| +++-| |.+++= -..+.+-.+.+ + .+
T Consensus 186 -i~~I~~~~h~~~~~llvDEAhGah~~F~-~lp~~a~~~gad~~~~~~~~vvqS~HKtL~al-tQts~lh~~~~~~v~~~ 262 (417)
T PF01276_consen 186 -IKEIAEICHKHGIPLLVDEAHGAHFGFH-PLPRSALALGADRPNDPGIIVVQSTHKTLPAL-TQTSMLHVKGDRIVDHE 262 (417)
T ss_dssp -HHHHHHHHCCTECEEEEE-TT-TTGGCS-GGGTTCSSTTSS-CTSBEEEEEEEHHHHSSS--TT-EEEEEETCCCTTHH
T ss_pred -HHHHHHHhcccCCEEEEEccccccccCC-CCccchhhccCccccccceeeeechhhccccc-ccceEEEecCCCcccHH
Confidence 9999999999999999999987543322 222234445566 77655 877652 33455555433 2 23
Q ss_pred HhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH-hh--ccHHHHHHHHHHHHHhhhhhc
Q 010250 361 VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY-KE--RNIVEQVNKIAPKFQDGVKAF 418 (514)
Q Consensus 361 ~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~-~~--~~~~~~~~~~~~~l~~~L~~l 418 (514)
.+.. .+..-.|.+.+-+-++..-.+.+.+ .+ +.+.++..++.+.+|+.|+++
T Consensus 263 ~~~~------~l~~~~TTSPSY~lmASlD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~ 317 (417)
T PF01276_consen 263 RVNE------ALSMHQTTSPSYPLMASLDVARAQMEEEEGRELLEEAIELAEEFRKKINRL 317 (417)
T ss_dssp HHHH------HHHHHS-SS--HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH------HHHHHcCCChHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 3332 1222246666666666666666666 33 357888888899999999543
No 364
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.75 E-value=6.7e-06 Score=81.27 Aligned_cols=305 Identities=14% Similarity=0.150 Sum_probs=151.8
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH-HHHHHHHHHhhcCC-----CCccEEEEEecCCcccceeeeecCC
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT-QVKLVWYYNNALGR-----PNKKKFIARQKSYHGSTLIAASLSG 216 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~-Alk~a~~~~~~~~~-----~~~~~ii~~~~~yHG~t~~~~~~s~ 216 (514)
.+...|+.+..++++ +...++++...+.|-.++. ++..++.+....+. .++-|+|...++|-.+-...
T Consensus 68 l~Gipe~r~l~a~ll-gv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~----- 141 (425)
T PF12897_consen 68 LDGIPEARELFAELL-GVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAIT----- 141 (425)
T ss_dssp SS--HHHHHHHHHHH-TS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHH-----
T ss_pred cCChHHHHHHHHHHh-CCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHH-----
Confidence 344556666666666 3456777776655544443 33334333222221 24678999999995432111
Q ss_pred CccccCCCCCCCCcccccCC-CCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHH
Q 010250 217 LPALHQKFDLPAPFVLHTDC-PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFE 295 (514)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~ 295 (514)
+.|++- ...++. ++. -|++.+|+++.+ ...+.++++-|.+++-.-+..+++-.+
T Consensus 142 -----E~~Gie---mi~VpM~~dG---------------PDmD~Ve~LV~~--D~svKGiWcVP~ySNPtG~tySde~vr 196 (425)
T PF12897_consen 142 -----EHFGIE---MIPVPMTEDG---------------PDMDMVEELVAE--DPSVKGIWCVPKYSNPTGITYSDEVVR 196 (425)
T ss_dssp -----HHCT-E---EEEEEEETTE---------------E-HHHHHHHTHT--STTEEEEEE-SSS-TTT-----HHHHH
T ss_pred -----HhhCcE---EEecCCCCCC---------------CCHHHHHHHHhc--CCccceEEeCCCccCCCCccCCHHHHH
Confidence 111110 000000 000 026888888754 357999999998765433566888888
Q ss_pred HHHHH-HHhcCCEEEEechhcCcccc-ccc--ce-------ecccCCCCchh----chhh-hhcCCcccceeEEeCHHHH
Q 010250 296 KVQAV-VKKYDILFIADEVICAFGRL-GTM--FG-------CDKYSIKPDLV----SFAK-ALSSAYMPIGAILVSPEVS 359 (514)
Q Consensus 296 ~l~~l-~~~~gillI~DEv~tG~gr~-G~~--~~-------~~~~gv~pDiv----~~sK-~l~gG~~pig~v~~~~~i~ 359 (514)
++..+ +...+..++-|.+|+ +-.. +.. -. +...| .||.+ +.|| .+.| ..++++.++++-+
T Consensus 197 rlA~m~~AA~DFRI~WDNAY~-vHhL~~~~~~~~~~nil~~~~~AG-npdrv~~F~STSKITf~G--aGva~~aaS~~Nl 272 (425)
T PF12897_consen 197 RLAAMKTAAPDFRIFWDNAYA-VHHLYDEEPRDALLNILDACAKAG-NPDRVYVFASTSKITFPG--AGVAFFAASEANL 272 (425)
T ss_dssp HHHHS--SSTT-EEEEE-TTT-T-BSSSSSS------HHHHHHHTT--TTSEEEEEESTTTS-TT--SS-EEEEE-HHHH
T ss_pred HHhcCCcCCcCeEEEeecCce-EeeccccccchhhhHHHHHHHHcC-CCCeEEEEecccccccCC--cceeeeecCHHHH
Confidence 88888 346799999999987 3111 110 00 01111 36644 4678 5666 4689999999888
Q ss_pred HHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhh----hh----cc-CCCceeEEEee
Q 010250 360 EVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV----KA----FS-DSPIIGEIRGT 430 (514)
Q Consensus 360 ~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L----~~----l~-~~~~~~~v~g~ 430 (514)
+.+... ....|.+.+-+.+..-..-++-.+ .++.+++++.++.++-+. +. |. ...+.......
T Consensus 273 ~~~~~~-------~~~~tIgpdKvNQLRHvrff~d~~-gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~ 344 (425)
T PF12897_consen 273 AWIKKH-------LSVQTIGPDKVNQLRHVRFFKDAE-GGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPK 344 (425)
T ss_dssp HHHHHH-------HHHH-S---HHHHHHHHHHHHSHH-THHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---S
T ss_pred HHHHHH-------hcCceeCccHHHHHHHHHHhcChh-hHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCC
Confidence 887642 223455666565554443333211 145555555444443222 21 22 23455555555
Q ss_pred -eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-----------CEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250 431 -GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----------DNIMMSPPFIMSPEEVDELISKYGK 498 (514)
Q Consensus 431 -g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-----------~~iRi~p~~~~t~e~id~~~~~l~~ 498 (514)
|.|++++..+.. ++++.+.+.+.||..++.| ..||++|. .-+.||++.+++.+.-
T Consensus 345 GGYFIsld~~~G~------------AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS-~P~leel~~Am~~~~~ 411 (425)
T PF12897_consen 345 GGYFISLDVLDGT------------AKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPS-YPSLEELETAMDVFAT 411 (425)
T ss_dssp BSS-EEEEESTT-------------HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--S-SS-HHHHHHHHHHHHH
T ss_pred CceEEEEecCCCh------------HHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCC-CCCHHHHHHHHHHHHH
Confidence 456778776532 6789999999999999754 46999996 4688999999999987
Q ss_pred HHHHH
Q 010250 499 ALKAT 503 (514)
Q Consensus 499 ~l~~~ 503 (514)
+++-.
T Consensus 412 cv~la 416 (425)
T PF12897_consen 412 CVKLA 416 (425)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76543
No 365
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.72 E-value=9.4e-06 Score=78.95 Aligned_cols=320 Identities=17% Similarity=0.221 Sum_probs=167.2
Q ss_pred chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCC
Q 010250 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK 223 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~ 223 (514)
.....|++...+.| +++.++.+.-|--|-..-+..+.. +....+..+++.+++.|.-.|-+.....|... +.
T Consensus 79 rs~~~L~~avkdif---Gfq~~iPthQGRgAE~Il~~i~ik---~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~-~n- 150 (471)
T COG3033 79 RSYYALADAVKDIF---GFQYTIPTHQGRGAENILIPILIK---KGEQEPGSKMVAFSNYHFDTTRGHIQINGATP-RN- 150 (471)
T ss_pred ccHHHHHHHHHHhc---CceeeeeccCCccHHHHHHHHHhh---hccccCCccccccccceecchhHHHHhcCCcc-cc-
Confidence 34467888888888 577888888766555544444432 11112235677777655544433332222111 00
Q ss_pred CCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh
Q 010250 224 FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK 303 (514)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~ 303 (514)
.-.+..+-..+..| |++ ..+++.|+++|.+.+++++..|++--.++..|-.+-+-.-+++++++|++
T Consensus 151 ~~~~ea~d~~~~~p--FKG-----------d~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~k 217 (471)
T COG3033 151 VYVDEAFDTEVKYP--FKG-----------NFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKK 217 (471)
T ss_pred ccccccccccccCC--CCC-----------ccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHH
Confidence 00011111111111 222 23478999999998888887666655455555566677889999999999
Q ss_pred cCCEEEEechhcCcccccccceec-ccCCC--------------Cchhchh-hhhcCCcccceeEEe-CHH----HHHHh
Q 010250 304 YDILFIADEVICAFGRLGTMFGCD-KYSIK--------------PDLVSFA-KALSSAYMPIGAILV-SPE----VSEVI 362 (514)
Q Consensus 304 ~gillI~DEv~tG~gr~G~~~~~~-~~gv~--------------pDiv~~s-K~l~gG~~pig~v~~-~~~----i~~~l 362 (514)
||+.++.|-.-. .-. ..|..+ ..|-+ .|-.++| |. -|..++|.+++ +++ +...+
T Consensus 218 y~ipvv~Da~Rf--aEN-aYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KK--D~lvnmGGfl~~~D~~~fDvy~~~ 292 (471)
T COG3033 218 YDIPVVMDAARF--AEN-AYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKK--DGLVNMGGFLCFKDDSFFDVYEEC 292 (471)
T ss_pred cCCcEEeehhhh--hhh-hhhhhhcCcccccccHHHHHHHHHhhhhhheeeccc--cceeccccEEEecCccHHHHHHHH
Confidence 999999997632 011 011111 11111 2223333 31 13355665554 554 33333
Q ss_pred hhccCCCCcccccCCCCC----cHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEE-
Q 010250 363 HSQSNTLGSFSHGFTYSG----HPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTE- 437 (514)
Q Consensus 363 ~~~~~~~~~~~~~~t~~~----~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~- 437 (514)
... .-......||++ ...++|++ |...-+.++.++--.-.++|.++|.+. ..|++..+-|.+.++-..
T Consensus 293 ~~~---~V~~eG~~tYGgl~GrdmealAvG---L~e~~~~~yl~~Rv~Qv~YL~~~l~~~-GVpi~~paGGHavfvda~~ 365 (471)
T COG3033 293 RTL---VVVQEGFPTYGGLAGRDMEALAVG---LREGVNFDYLAHRVAQVQYLADGLEEA-GVPIVQPAGGHAVFVDAGK 365 (471)
T ss_pred Hhh---eEeeccccccCcccchhHHHHHHH---HHHhcCcHHHHHHHHHHHHHHHHHHhc-CCeeEecCCCceEEeehhh
Confidence 221 011111234433 33334433 332223455554445567888888876 556666665555443321
Q ss_pred EccCCCCCCCCCCccchHHHHHHHH-HHCCcEEEee------------------CCEEEEeCCC-CCCHHHHHHHHHHHH
Q 010250 438 FADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVS------------------GDNIMMSPPF-IMSPEEVDELISKYG 497 (514)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~------------------g~~iRi~p~~-~~t~e~id~~~~~l~ 497 (514)
+-+ ..+.+.|+ ++.++-+| ++-||-+... -+.+|++.|- +-|.+.+|..++.++
T Consensus 366 ~lp-hip~eqFp-----aqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~ 439 (471)
T COG3033 366 FLP-HIPAEQFP-----AQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFK 439 (471)
T ss_pred hcC-CCChhhCc-----HHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHH
Confidence 111 22222232 33344343 4456554411 1458999885 458999999999888
Q ss_pred HHHHH
Q 010250 498 KALKA 502 (514)
Q Consensus 498 ~~l~~ 502 (514)
+..+.
T Consensus 440 ~l~e~ 444 (471)
T COG3033 440 ALKEN 444 (471)
T ss_pred HHHhc
Confidence 77653
No 366
>PRK13578 ornithine decarboxylase; Provisional
Probab=98.69 E-value=3.3e-06 Score=91.71 Aligned_cols=314 Identities=13% Similarity=0.105 Sum_probs=159.0
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEe-CChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee-eecCCC-c
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFT-NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA-ASLSGL-P 218 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~-~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~-~~~s~~-~ 218 (514)
+..+..+..+..++.| +.++.+|. |+-|.+|.+++..+. ++.+.|.++.+.|-+...+ +.++|. |
T Consensus 172 ~eG~i~eAq~~AA~~f---gAd~tyFlvNGTS~gn~a~i~a~~---------~~Gd~VLvdRN~HKSv~hgaLiLsGa~P 239 (720)
T PRK13578 172 HEGAAKDAQKHAAKVF---NADKTYFVLNGTSASNKVVTNALL---------TPGDLVLFDRNNHKSNHHGALIQAGATP 239 (720)
T ss_pred CChHHHHHHHHHHHHh---CCCceEEEeCChhHHHHHHHHHhc---------CCCCEEEeecccHHHHHHHHHHHcCCeE
Confidence 3445566677777777 44567664 555555555555442 2345666788888887654 666664 4
Q ss_pred cccCC----CCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCC-------cEEEEEEccccCCCCcc
Q 010250 219 ALHQK----FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPE-------TIAAFIAEPVIGAGGVI 287 (514)
Q Consensus 219 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~-------~~aavivEpv~~~~G~~ 287 (514)
.|-.+ ++... +.+.+.|. .+.+++.+.+..++ -.++||..|.+ .|++
T Consensus 240 VYl~P~~n~~Gi~g-----------------~I~~~~~~---~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY--dG~~ 297 (720)
T PRK13578 240 VYLETARNPFGFIG-----------------GIDAHCFD---EEYLREQIREVAPERADEARPFRLAVIQLGTY--DGTI 297 (720)
T ss_pred EEeeccccccCCcC-----------------CCChHHcc---HHHHHHHHHhcCccccccccCceEEEEECCCC--ccee
Confidence 33211 11110 11112221 25567766654222 25567776654 2555
Q ss_pred cCChhHHHHHHHH-HHhcCCEEEEechhcCccccccc---ceecccCCCCc----hhchh--hhhcCCcccceeEEeCHH
Q 010250 288 PPPATYFEKVQAV-VKKYDILFIADEVICAFGRLGTM---FGCDKYSIKPD----LVSFA--KALSSAYMPIGAILVSPE 357 (514)
Q Consensus 288 ~p~~~~L~~l~~l-~~~~gillI~DEv~tG~gr~G~~---~~~~~~gv~pD----iv~~s--K~l~gG~~pig~v~~~~~ 357 (514)
.. +++|.++ |+.++ .|++||++.+.-+.... +.-......+| ++|=| |-|++ +-..|.+-.+..
T Consensus 298 yd----i~~I~~~~~h~~~-~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~a-lTQaS~LHvk~~ 371 (720)
T PRK13578 298 YN----ARQVVDKIGHLCD-YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAG-FSQTSQIHKKDN 371 (720)
T ss_pred ec----HHHHHHHhhccCC-cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchh-hhhHhhhhcCCc
Confidence 55 8999998 78888 99999998755333332 11111233466 66545 76654 112233333221
Q ss_pred HH---------HHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhh-hhccCCCce
Q 010250 358 VS---------EVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGV-KAFSDSPII 424 (514)
Q Consensus 358 i~---------~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L-~~l~~~~~~ 424 (514)
.+ +.+.. .+..-.|.+.+-+-+|..-.+-..++. +.+.++..+.+..+|+.| +.+......
T Consensus 372 ~i~g~~~~v~~~r~~~------al~m~qSTSPsY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~ 445 (720)
T PRK13578 372 HIKGQARYCPHKRLNN------AFMLHASTSPFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPF 445 (720)
T ss_pred ccccccccCCHHHHHH------HHHHHcCCChHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeec
Confidence 11 22221 111112444443333333333344432 346777777888888877 443221111
Q ss_pred e--EEE----------------------------eeee------e-----EEEEEccCCCCCCCCCCccchHHHHHHHHH
Q 010250 425 G--EIR----------------------------GTGL------I-----LGTEFADNKSPNEPFPPEWGIGAYFGAQCE 463 (514)
Q Consensus 425 ~--~v~----------------------------g~g~------~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 463 (514)
. .+. |... + +.+....-......+....-.+..+.+.|.
T Consensus 446 ~p~~v~~~~~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~ 525 (720)
T PRK13578 446 IPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLR 525 (720)
T ss_pred ccccccccccccCchhhhcccccccccccCccccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHH
Confidence 0 000 0000 0 001000000000000000011466788888
Q ss_pred HCCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 464 KHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 464 ~~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
++||.+-..+ ..+-+-.+...|+++++.+++.|.+.-+
T Consensus 526 e~gI~~E~~d~~~vL~l~s~g~t~~~~~~Lv~aL~~f~~ 564 (720)
T PRK13578 526 ENGIVPEKCDLNSILFLLTPAEDMAKLQQLVAMLARFEK 564 (720)
T ss_pred HcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 8899987665 4555555568999999999998886643
No 367
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.66 E-value=2.8e-06 Score=83.69 Aligned_cols=295 Identities=16% Similarity=0.201 Sum_probs=160.0
Q ss_pred hHHHHHHHHHHhcCcCC-----CCeE--EEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC
Q 010250 145 PSLDLAKELLEMFTASK-----MAKV--FFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL 217 (514)
Q Consensus 145 ~~~ela~~L~~~~~~~~-----~~~v--~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~ 217 (514)
...++.+.+.+++-+.+ .+++ +=+.|||-|.-.+.+....+ .++..|-+.+++|..+.-..... |.
T Consensus 70 G~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~------~~~~~vwis~PtW~NH~~If~~a-Gl 142 (396)
T COG1448 70 GLPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARF------FPDATVWISDPTWPNHKAIFEAA-GL 142 (396)
T ss_pred CcHHHHHHHHHHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHh------CCCceEEeCCCCcHhHHHHHHhc-CC
Confidence 33455555555442211 1233 44789998888888766433 34556778788875442111111 11
Q ss_pred ccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHH
Q 010250 218 PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKV 297 (514)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l 297 (514)
.. ..+|.+ . ..+ .. .+.+.+-..+.+.. +....++-.+..+++| +-|+.+-+++|
T Consensus 143 ~v--------------~~Y~Yy-d--~~~-~~-----~df~~mla~L~~a~-~~~vvLLH~CcHNPTG-~D~t~~qW~~l 197 (396)
T COG1448 143 EV--------------ETYPYY-D--AET-KG-----LDFDGMLADLKTAP-EGSVVLLHGCCHNPTG-IDPTEEQWQEL 197 (396)
T ss_pred ce--------------eeeecc-c--ccc-cc-----ccHHHHHHHHHhCC-CCCEEEEecCCCCCCC-CCCCHHHHHHH
Confidence 10 011111 0 000 00 11233333343333 3334555556677777 45677889999
Q ss_pred HHHHHhcCCEEEEechhcCcccccccceecccCC------CCch-h--chhhhhcCCcccceeEEe---CHHHHHHhhhc
Q 010250 298 QAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI------KPDL-V--SFAKALSSAYMPIGAILV---SPEVSEVIHSQ 365 (514)
Q Consensus 298 ~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv------~pDi-v--~~sK~l~gG~~pig~v~~---~~~i~~~l~~~ 365 (514)
.++.++.|.+-++|=+|-||+.-. --+.+++ .+.+ | +|||.|+-=+-++|++.. +++..+.+.++
T Consensus 198 ~~~~~~r~lip~~D~AYQGF~~Gl---eeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sq 274 (396)
T COG1448 198 ADLIKERGLIPFFDIAYQGFADGL---EEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQ 274 (396)
T ss_pred HHHHHHcCCeeeeehhhhhhccch---HHHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHH
Confidence 999999999999999999996432 2222222 2333 3 578977751167776433 45555554431
Q ss_pred cCCCCcccccCCCCCcHH-HHHHHHHHHH--HHh-----h-ccHHHHHHHHHHHHHhhhhhc-cC--CCceeEEEeeeee
Q 010250 366 SNTLGSFSHGFTYSGHPV-SCAVAIEALK--IYK-----E-RNIVEQVNKIAPKFQDGVKAF-SD--SPIIGEIRGTGLI 433 (514)
Q Consensus 366 ~~~~~~~~~~~t~~~~pl-~~aaa~aal~--~~~-----~-~~~~~~~~~~~~~l~~~L~~l-~~--~~~~~~v~g~g~~ 433 (514)
- ....-.+|+.+|- +++.....|+ .++ | +++.+++.+++..|.+.|++. .. ...+. ...|++
T Consensus 275 l----k~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~--~Q~GMF 348 (396)
T COG1448 275 L----KAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFII--SQRGMF 348 (396)
T ss_pred H----HHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHh--hcCcee
Confidence 0 1123346655543 2222222221 111 1 356788889999999999875 22 23332 223332
Q ss_pred EEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250 434 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKA 499 (514)
Q Consensus 434 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~ 499 (514)
...-|. .+++.....+.||+....| ||+. ..+++..|+.+.+.|.++
T Consensus 349 sy~Gls---------------~~QV~rLree~~IY~v~sG---Ri~v-aGl~~~ni~~va~ai~~v 395 (396)
T COG1448 349 SYTGLS---------------PEQVDRLREEFGIYLVASG---RINV-AGLNTSNIDYVAKAIAAV 395 (396)
T ss_pred ecCCCC---------------HHHHHHHHHhccEEEecCC---eeee-ccCChhhHHHHHHHHHhh
Confidence 222111 2334444456799987666 6654 278999999999988765
No 368
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.64 E-value=1.7e-06 Score=89.46 Aligned_cols=316 Identities=13% Similarity=0.158 Sum_probs=191.0
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEE-eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFF-TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPAL 220 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~-~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~ 220 (514)
+.....+|++.|++.. +.|.+.| -|||...-.+-++..|.|...+|..-| .|....-+-||....+....|-..
T Consensus 580 Y~~lf~~Le~~Lc~iT---G~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hR-nvClIPvSAHGTNPASA~Magmkv- 654 (1001)
T KOG2040|consen 580 YQQLFTELEKDLCEIT---GFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHR-NVCLIPVSAHGTNPASAAMAGMKV- 654 (1001)
T ss_pred HHHHHHHHHHHhheee---cccceeecCCCCcccchhhHHHHHHHHHhccCCcc-eeEEEeecccCCChhhHHhcCCEE-
Confidence 3455667888888875 6777877 679999999999999999988885544 455566788998655555444322
Q ss_pred cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHH
Q 010250 221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV 300 (514)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l 300 (514)
..+.|.. .+..++.+|.+.-.+. .++.|++++. -+++-|+..+. ++++.++
T Consensus 655 -----------vpV~~~~-------------~G~id~~dLk~kaekh-~~~Laa~MvT-YPST~GvfE~~---i~d~cd~ 705 (1001)
T KOG2040|consen 655 -----------VPVGCDA-------------NGNIDMVDLKAKAEKH-KDNLAALMVT-YPSTHGVFEEG---IDDICDI 705 (1001)
T ss_pred -----------EEeeccC-------------CCCccHHHHHHHHHHh-hhhhheeEEe-ccccccccccc---HHHHHHH
Confidence 1122211 1223356776665443 4678887774 34566888776 8999999
Q ss_pred HHhcCCEEEEech----hcCcccccccce-ecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCC-C----C
Q 010250 301 VKKYDILFIADEV----ICAFGRLGTMFG-CDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNT-L----G 370 (514)
Q Consensus 301 ~~~~gillI~DEv----~tG~gr~G~~~~-~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~-~----~ 370 (514)
.++||--+..|-+ |-|+.|-|..++ +.|.++.- ||+=.-|||+-.+|=+.+.+.+...+....-- . +
T Consensus 706 iHehGGQVYlDGANMNAqVGlc~pGd~GaDV~HLNLHK---TFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~ 782 (1001)
T KOG2040|consen 706 IHEHGGQVYLDGANMNAQVGLCRPGDIGADVCHLNLHK---TFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPED 782 (1001)
T ss_pred HHhcCCEEEecCCCccceecccCCccccccceeecccc---eeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCC
Confidence 9999999999975 668888876543 34444421 44444556544555566777776655432110 0 0
Q ss_pred c--c-cccCCCCCcHHHHHHHHHHHHHHhhccHHH---HHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEE----EEcc
Q 010250 371 S--F-SHGFTYSGHPVSCAVAIEALKIYKERNIVE---QVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGT----EFAD 440 (514)
Q Consensus 371 ~--~-~~~~t~~~~pl~~aaa~aal~~~~~~~~~~---~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i----~~~~ 440 (514)
. + ..+..-.|+..-+....+-++.+...++.+ -.--+.+++.++|+.- ++++ .++.-.+++- ++.+
T Consensus 783 ~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h--Ykil--~~~~~~~vaHEFIlD~r~ 858 (1001)
T KOG2040|consen 783 TSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH--YKIL--FRGENGLVAHEFILDLRP 858 (1001)
T ss_pred CCCccceeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc--ccee--EecCCcceeeeeeeechh
Confidence 0 0 001111233344445566677776655432 2334566777777642 2221 1111113332 2222
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHCCcEEE----eeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 441 NKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----VSGDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
-+.+. .--+..++++|++.|+..- |..+.+.+-|.-.-+.+|+|++++++-..-+++.
T Consensus 859 fK~~a------gieavDvAKRL~DYgFHaPTmswPV~gtLMIEPTESE~k~ElDRfcdAliSIreEI~ 920 (1001)
T KOG2040|consen 859 FKKTA------GIEAVDVAKRLMDYGFHAPTMSWPVAGTLMIEPTESEDKAELDRFCDALISIREEIA 920 (1001)
T ss_pred hcccc------CCcHHHHHHHHHhccCCCCccccccCCceEeccCccccHHHHHHHHHHHHHHHHHHH
Confidence 11110 0114568899999998754 3457899999888899999999998776655544
No 369
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=98.60 E-value=1.3e-05 Score=87.11 Aligned_cols=311 Identities=14% Similarity=0.152 Sum_probs=162.7
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCCh-hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC-ccc
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSG-SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PAL 220 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sG-seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~ 220 (514)
..+..+..+..++.| +.++.+|..+| |.+|.+++..+. ++.+.|.++.+.|-+...++.++|. |.|
T Consensus 194 ~G~i~eAe~~aA~~f---gAd~tyfvvNGTS~~n~av~~a~~---------~~Gd~VLvdRN~HKSv~~aLilsga~PVY 261 (713)
T PRK15399 194 TGPHLEAEEYIARTF---GAEQSYIVTNGTSTSNKIVGMYAA---------PAGSTLLIDRNCHKSLAHLLMMSDVVPIW 261 (713)
T ss_pred ChHHHHHHHHHHHHh---CCCcEEEEeCChHHHHHHHHHHhc---------CCCCEEEeecccHHHHHHHHHHcCCeeEE
Confidence 344556666777777 45677775555 555666555442 3345666788888887777777764 333
Q ss_pred cCCCCCCCCcccccCCCCcccCCCCC-CChhHHHHHHHHHHHHHHHHhCCCc---EEEEEEccccCCCCcccCChhHHHH
Q 010250 221 HQKFDLPAPFVLHTDCPHYWRYAHPG-ETEEEYSTRLANNLEDLILKEGPET---IAAFIAEPVIGAGGVIPPPATYFEK 296 (514)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~le~li~~~~~~~---~aavivEpv~~~~G~~~p~~~~L~~ 296 (514)
-.+-. . ++...+ .+.+.|. .+.+++.+.+. ++. .++||..|.+ .|++.. ++.
T Consensus 262 l~P~~------n--------~~Gi~g~I~~~~~~---~e~I~~~i~~~-p~~~~p~~vvit~pTY--dGi~yd----~~~ 317 (713)
T PRK15399 262 LKPTR------N--------ALGILGGIPRREFT---RDSIEEKVAAT-TQAQWPVHAVITNSTY--DGLLYN----TDW 317 (713)
T ss_pred ecccc------c--------ccCCcCCCChhhcc---HHHHHHHHHhC-CCcCCceEEEEECCCC--CceeeC----HHH
Confidence 21110 0 011111 1111221 26677777653 222 4778887744 365554 788
Q ss_pred HHHHHHhcCCEE-EEechhcCcccccccce-ecc--cCCCCchh---chh--hhhcCCcccceeEEeCHHHH-HHhhhcc
Q 010250 297 VQAVVKKYDILF-IADEVICAFGRLGTMFG-CDK--YSIKPDLV---SFA--KALSSAYMPIGAILVSPEVS-EVIHSQS 366 (514)
Q Consensus 297 l~~l~~~~gill-I~DEv~tG~gr~G~~~~-~~~--~gv~pDiv---~~s--K~l~gG~~pig~v~~~~~i~-~~l~~~~ 366 (514)
|.++| |+.+ ++||++.+.-+....+. ... .+-.+|.+ |-| |-+++ +-..|.+-.+..+- +.+..
T Consensus 318 I~~~~---g~~~ilvDEAhgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~a-lTQaS~iHvk~~vd~~~~n~-- 391 (713)
T PRK15399 318 IKQTL---DVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLAA-FSQASLIHIKGEYDEETFNE-- 391 (713)
T ss_pred HHHHh---CCCEEEEeccchhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccccc-cchheeeeecCCCCHHHHHH--
Confidence 88888 6766 59999876533333221 111 11146777 333 86665 12334444433221 22221
Q ss_pred CCCCcccccCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhccC-C-CceeEEEe------------
Q 010250 367 NTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSD-S-PIIGEIRG------------ 429 (514)
Q Consensus 367 ~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~-~-~~~~~v~g------------ 429 (514)
.+..-.|.+.+-+-+|..-.+...++. +.+.++..+.+..+|+.|.++.+ . +....+-+
T Consensus 392 ----a~~m~~STSPsY~LmASLD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l 467 (713)
T PRK15399 392 ----AFMMHTSTSPSYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPV 467 (713)
T ss_pred ----HHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceec
Confidence 112223445554545554455555542 35778888888888888877522 0 00000000
Q ss_pred --------ee----------e-eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHHHH
Q 010250 430 --------TG----------L-ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEV 489 (514)
Q Consensus 430 --------~g----------~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e~i 489 (514)
.+ . =+.+..+.-. ....+....-.+..+.+.|.++||.+-..+ +.+-+..+...|++++
T Consensus 468 ~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~-~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~ 546 (713)
T PRK15399 468 APGEQWHGFKDADADHMFLDPVKVTILTPGMD-EQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKA 546 (713)
T ss_pred CCCcccccccccccccccCCCceEEEEecCcc-cccccccCCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHH
Confidence 00 0 0001110000 000000111125667888999999988665 4555555578899999
Q ss_pred HHHHHHHHHHH
Q 010250 490 DELISKYGKAL 500 (514)
Q Consensus 490 d~~~~~l~~~l 500 (514)
+.+++.|.+.-
T Consensus 547 ~~L~~aL~~f~ 557 (713)
T PRK15399 547 MGLLRGLTEFK 557 (713)
T ss_pred HHHHHHHHHHH
Confidence 99999887663
No 370
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=98.55 E-value=8.4e-06 Score=88.57 Aligned_cols=304 Identities=13% Similarity=0.163 Sum_probs=160.2
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCCh-hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC-ccc
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSG-SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PAL 220 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sG-seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~ 220 (514)
..+..+..+..++.| +.++.+|..+| |.+|.+++..+. ++.+.|.++.+.|-+...++.++|. |.|
T Consensus 194 ~G~i~eAe~~AA~~f---gAd~tyfvvNGTS~~n~av~~a~~---------~~Gd~VLvdRN~HKSv~haLilsga~PVY 261 (714)
T PRK15400 194 SGPHKEAEEYIARVF---NADRSYMVTNGTSTANKIVGMYSA---------PAGSTVLIDRNCHKSLTHLMMMSDVTPIY 261 (714)
T ss_pred ChHHHHHHHHHHHHh---CCCcEEEEeCchHHHHHHHHHHhc---------CCCCEEEeecccHHHHHHHHHHcCCeEEE
Confidence 345566667777777 45677775555 555555554442 3345666788888887777777765 333
Q ss_pred cC----CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCc---EEEEEEccccCCCCcccCChhH
Q 010250 221 HQ----KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPET---IAAFIAEPVIGAGGVIPPPATY 293 (514)
Q Consensus 221 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~---~aavivEpv~~~~G~~~p~~~~ 293 (514)
-. .++...+ .+...|. .+.+++.+.+. ++. .++||+.|.+ .|++..
T Consensus 262 l~P~rn~~Gi~g~-----------------I~~~~~~---~e~i~~~i~~~-p~ak~p~~~vit~pTY--dG~~yd---- 314 (714)
T PRK15400 262 FRPTRNAYGILGG-----------------IPQSEFQ---HATIAKRVKET-PNATWPVHAVITNSTY--DGLLYN---- 314 (714)
T ss_pred ecccccccCCccC-----------------CCccccC---HHHHHHHHHhC-ccccCccEEEEECCCC--ccEecC----
Confidence 21 1111111 0101111 26677777543 221 2578887754 365655
Q ss_pred HHHHHHHHHhcCCEEEEechhcCcccccccce-ecc--cCCCC-c--hhchh--hhhcCCcccceeEEe----C-HHHHH
Q 010250 294 FEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDK--YSIKP-D--LVSFA--KALSSAYMPIGAILV----S-PEVSE 360 (514)
Q Consensus 294 L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~--~gv~p-D--iv~~s--K~l~gG~~pig~v~~----~-~~i~~ 360 (514)
++.|.++|+.++ +++||++.+.-+....+. ... .|-.+ | ++|=| |-|++ +-..|.+-. + +.+-+
T Consensus 315 ~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL~a-lTQaS~LHvkg~vd~~~~n~ 391 (714)
T PRK15400 315 TDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAA-FSQASMIHVKGDVNEETFNE 391 (714)
T ss_pred HHHHHHHhCCCC--EEEEccchhhhccCcccCCcChhhcCCCCCCceEEEEchhhcccc-hhHHhHHHHcCCCCHHHHHH
Confidence 899999999887 689999876533333221 111 12211 4 55444 75554 111122211 2 22222
Q ss_pred HhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhccC------CCcee-E-E--
Q 010250 361 VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSD------SPIIG-E-I-- 427 (514)
Q Consensus 361 ~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~------~~~~~-~-v-- 427 (514)
.+. .| .|.+.+-+-+|..-.+...++. +.+.++..+.+..+|+.|.++.. ..... + +
T Consensus 392 a~~---------m~-~STSPsY~l~ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~ 461 (714)
T PRK15400 392 AYM---------MH-TTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDT 461 (714)
T ss_pred HHH---------HH-cCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhccc
Confidence 222 22 3444554445544455555543 35778888888889988877632 10000 0 0
Q ss_pred ------------Eeeee-----------eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEeCCCC
Q 010250 428 ------------RGTGL-----------ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFI 483 (514)
Q Consensus 428 ------------~g~g~-----------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~ 483 (514)
.|... =+.+..+.-.. ...+....-.+..+.+.|.++||.+-..+ ..+-+..+..
T Consensus 462 ~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~-~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~~iLfl~s~g 540 (714)
T PRK15400 462 TECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKK-DGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIG 540 (714)
T ss_pred chhcccCccccccCcccccccccccCCceEEEEeCCCCC-CccccccCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCC
Confidence 00000 00011100000 00000011125567788999999988655 4565555578
Q ss_pred CCHHHHHHHHHHHHHH
Q 010250 484 MSPEEVDELISKYGKA 499 (514)
Q Consensus 484 ~t~e~id~~~~~l~~~ 499 (514)
.|+++++.+++.|.+.
T Consensus 541 ~t~~~~~~L~~aL~~f 556 (714)
T PRK15400 541 IDKTKALSLLRALTDF 556 (714)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 9999999999988765
No 371
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=98.51 E-value=3.1e-05 Score=76.20 Aligned_cols=337 Identities=16% Similarity=0.142 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCc
Q 010250 119 PRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK 194 (514)
Q Consensus 119 p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~ 194 (514)
.++++....-++..+.+ ++...+..-.+...|+.|.+.=+ +.+.+.++++.+.+.|+...+++... ..+
T Consensus 89 ~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~-------~~~ 161 (475)
T KOG0258|consen 89 TDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIA-------GKK 161 (475)
T ss_pred HHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhc-------CCC
Confidence 44555555555543211 11123344556677777766643 24568899999999999999998752 246
Q ss_pred cEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC--CCcE
Q 010250 195 KKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG--PETI 272 (514)
Q Consensus 195 ~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~--~~~~ 272 (514)
+.|++.-+-|.=++....-.++... ++. ++-...|. .+.++|++.+.+.. -+-.
T Consensus 162 ~GvliPiPQYPLYsAti~l~~~~~v---------~Yy--LdEe~~W~-------------ld~~el~~~~~eA~k~i~~r 217 (475)
T KOG0258|consen 162 TGVLIPIPQYPLYSATISLLGGTQV---------PYY--LDEESNWS-------------LDVAELERSVDEARKGINPR 217 (475)
T ss_pred CceEeecCCCchhHHHHHHhCCccc---------cee--eccccCCC-------------CCHHHHHHHHHHHhccCCce
Confidence 6788888888655322111121110 000 00001111 12466776665432 1346
Q ss_pred EEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-Ccccccc-cceec----ccC-CCCchh------chh
Q 010250 273 AAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGT-MFGCD----KYS-IKPDLV------SFA 339 (514)
Q Consensus 273 aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~-~~~~~----~~g-v~pDiv------~~s 339 (514)
+.|+++|.+.+|-+ .+.+-+++|..+|.++|++|+.||||. -+.-.+. ++.+. +.| -.||-+ +.|
T Consensus 218 ~lvvINPGNPTGqv--ls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvS 295 (475)
T KOG0258|consen 218 ALVVINPGNPTGQV--LSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVS 295 (475)
T ss_pred EEEEECCCCccchh--hcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeeccc
Confidence 88999999888744 466889999999999999999999976 3333442 33321 122 234432 457
Q ss_pred hhhcC--CcccceeEE---eCHHHHHHhhhcc------CCCCc----ccccCCCCCcHHHHHHHHHHHHHHhhccHHHHH
Q 010250 340 KALSS--AYMPIGAIL---VSPEVSEVIHSQS------NTLGS----FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQV 404 (514)
Q Consensus 340 K~l~g--G~~pig~v~---~~~~i~~~l~~~~------~~~~~----~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~ 404 (514)
|+..| | .+-|++= ..+++.+.+.+-. .-.+. ........+.+- -.+..-+.+.+.+.+
T Consensus 296 KGy~gECG-~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~S------y~~~~~Ekd~il~~l 368 (475)
T KOG0258|consen 296 KGYMGECG-QRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVVNPPKPGDPS------YDLFSSEKDGILSSL 368 (475)
T ss_pred ccceeeec-ccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhhceecCCCCCCCcc------hhhhhhhhHhHHHHH
Confidence 87655 3 3444432 2455555443210 00000 000001111110 001111235678889
Q ss_pred HHHHHHHHhhhhhccCCCceeEEEeeeeeEEEE---EccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEeeC-------
Q 010250 405 NKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTE---FADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG------- 473 (514)
Q Consensus 405 ~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~---~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g------- 473 (514)
+.+.+.+.+.++++ +.+..-+..|.|+.+- ++.......- .........++.+|+ .-||.+.|+.
T Consensus 369 ~~ra~l~~~~~ns~---~gi~cn~~qGAMY~fP~i~lP~kaie~A~-~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~G 444 (475)
T KOG0258|consen 369 RSRAKLTEDAFNSL---EGISCNPVQGAMYLFPQISLPPKAIEAAK-ALGIAPDEFYCLKLLEATGICVVPGSGFGQKEG 444 (475)
T ss_pred HHHhHHHHHHHhhc---CceeeccCccceeecccccCCHHHHHHHH-HhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCc
Confidence 99999999999887 3444445577776652 2211000000 000001223444444 5799998752
Q ss_pred C-EEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 474 D-NIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 474 ~-~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
. .+|.+ ...+. + +.++.+++.=.+..
T Consensus 445 tyH~R~T---iLp~~-~-~~i~~~~~fH~~f~ 471 (475)
T KOG0258|consen 445 TYHFRTT---ILPPG-L-EIIEKFKKFHAEFM 471 (475)
T ss_pred eeEEEEe---ecCch-h-HHHHHHHHHHHHHH
Confidence 2 38876 33333 3 56666665544443
No 372
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.45 E-value=0.00024 Score=76.60 Aligned_cols=157 Identities=18% Similarity=0.209 Sum_probs=88.9
Q ss_pred HHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHHHHHHH---HhcCC--EEEEechhcCcccc---cc----
Q 010250 257 ANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV---KKYDI--LFIADEVICAFGRL---GT---- 322 (514)
Q Consensus 257 ~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~---~~~gi--llI~DEv~tG~gr~---G~---- 322 (514)
.+.|++.|.+. ....+.+|+.---..+.|.+-| |++|.++| +++|+ ++++|-++.|+.+. ..
T Consensus 262 ~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDp----l~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~ 337 (608)
T TIGR03811 262 INELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDG----IDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNF 337 (608)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCC----HHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccc
Confidence 57777777643 2223455555444455687877 99999998 77898 69999999987421 00
Q ss_pred -c-------------c------e-----ecccCCC-Cchhchh--hhhcCCcccceeEEeCH-HHHHHhhhccCCCCc--
Q 010250 323 -M-------------F------G-----CDKYSIK-PDLVSFA--KALSSAYMPIGAILVSP-EVSEVIHSQSNTLGS-- 371 (514)
Q Consensus 323 -~-------------~------~-----~~~~gv~-pDiv~~s--K~l~gG~~pig~v~~~~-~i~~~l~~~~~~~~~-- 371 (514)
. | . ....++. .|-+|+. |.+.-. ++.|+++.++ ++.+.+.....+...
T Consensus 338 ~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~P-y~~G~ll~Rd~~~~~~~~~~a~Yl~~~~ 416 (608)
T TIGR03811 338 IPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIP-YSAGGIVIQDIRMRDVISYFATYVFEKG 416 (608)
T ss_pred cccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccC-CCeEEEEEeCHHHHHHHhcCcchhcccc
Confidence 0 0 0 0011332 5555553 766555 6888888864 444444322111100
Q ss_pred -----ccccCCCCCcH--HHHHHHHHHHHHH--hh---ccHHHHHHHHHHHHHhhhhhc
Q 010250 372 -----FSHGFTYSGHP--VSCAVAIEALKIY--KE---RNIVEQVNKIAPKFQDGVKAF 418 (514)
Q Consensus 372 -----~~~~~t~~~~p--l~~aaa~aal~~~--~~---~~~~~~~~~~~~~l~~~L~~l 418 (514)
....++..++. ..+++...+++.+ .. .++.++.-+..+++.+.|++.
T Consensus 417 ~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 417 ADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred ccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00012233332 3355555777776 33 345677777888888888763
No 373
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.45 E-value=1e-05 Score=81.03 Aligned_cols=230 Identities=17% Similarity=0.132 Sum_probs=133.9
Q ss_pred ccCCCC--CHHHHHHHHHHHhcCCccccccccCCch---HHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHH
Q 010250 112 TALGGS--EPRLVAAATAQLNTLPFYHSFWNRTTKP---SLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYN 186 (514)
Q Consensus 112 ~~lGh~--~p~v~~A~~~~l~~~~~~~~~~~~~~~~---~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~ 186 (514)
.+||-+ +|++++++.+.+...... .+...+... ...+++.++.. .+.+.+..+|.-+.|+..++-...
T Consensus 32 t~lG~s~~~~e~iea~~~~~~~~v~L-e~~l~~g~~~~R~~~~~~~~~~~---~~aea~~ivnnn~aAVll~~~al~--- 104 (395)
T COG1921 32 TNLGRSLYSPEAIEAMKEAMRAPVEL-ETDLKTGKRGARLTELAELLCGL---TGAEAAAIVNNNAAAVLLTLNALA--- 104 (395)
T ss_pred ccCCCccCCHHHHHHHHHHhccccee-eeecccchhhHHHHHHHHHHhcc---cchhheeeECCcHHHHHHHHhhhc---
Confidence 567754 799999998887652211 111111111 12344444443 345778888888888887775442
Q ss_pred hhcCCCCccEEEEEec---CCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHH
Q 010250 187 NALGRPNKKKFIARQK---SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDL 263 (514)
Q Consensus 187 ~~~~~~~~~~ii~~~~---~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~l 263 (514)
.++..|+..-. ++|.+....+..+|......+. .......|++..
T Consensus 105 -----~~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~---------------------------tn~t~~~d~~~A 152 (395)
T COG1921 105 -----EGKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGT---------------------------TNRTHLKDYELA 152 (395)
T ss_pred -----cCCeEEEEccccccCCCCChhHHHHHcCCEEEEecc---------------------------cCcCCHHHHHHH
Confidence 23444444321 3444444444444432211000 000114677777
Q ss_pred HHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-ecccCCCCchhchh--h
Q 010250 264 ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYSIKPDLVSFA--K 340 (514)
Q Consensus 264 i~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~~gv~pDiv~~s--K 340 (514)
|.+.. ....=+..+..+-.|.+. ++++.++|++||+++|+|..-. . +.-.... .+.....+|+|+|| |
T Consensus 153 Ine~t--a~llkV~s~~~~f~~~l~-----~~~l~~ia~~~~lpvivD~aSg-~-~v~~e~~l~~~la~GaDLV~~SgdK 223 (395)
T COG1921 153 INENT--ALLLKVHSSNYGFTGMLS-----EEELVEIAHEKGLPVIVDLASG-A-LVDKEPDLREALALGADLVSFSGDK 223 (395)
T ss_pred hccCC--eeEEEEeecccccccccc-----HHHHHHHHHHcCCCEEEecCCc-c-ccccccchhHHHhcCCCEEEEecch
Confidence 76321 222333444445555553 7889999999999999997642 2 1111112 23344568999998 7
Q ss_pred hhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc
Q 010250 341 ALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER 398 (514)
Q Consensus 341 ~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~ 398 (514)
-|+| ...|.+++++++++.++.. ..+..+-..+...++..++|+.+...
T Consensus 224 llgG--PqaGii~GkKelI~~lq~~-------~l~Ralrv~K~tla~l~~aLe~y~~~ 272 (395)
T COG1921 224 LLGG--PQAGIIVGKKELIEKLQSH-------PLKRALRVDKETLAALEAALELYLQP 272 (395)
T ss_pred hcCC--CccceEechHHHHHHHHhh-------hhhhhhhcCcHhHHHHHHHHHHHcCc
Confidence 8887 5678899999999998753 22234455678888888899877653
No 374
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.30 E-value=7.9e-05 Score=71.12 Aligned_cols=343 Identities=18% Similarity=0.208 Sum_probs=186.7
Q ss_pred ccCCCCCHHHHHHHHHHHhc---CC-ccc----cccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHH
Q 010250 112 TALGGSEPRLVAAATAQLNT---LP-FYH----SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVW 183 (514)
Q Consensus 112 ~~lGh~~p~v~~A~~~~l~~---~~-~~~----~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~ 183 (514)
++||.-+....+.+.+.+++ .. ++| ..|-...++...+-..| . +...++|..+||=+ +|...+.+.
T Consensus 74 NSLGLmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~i---V-GA~e~EvavmNsLT-vNlh~Ll~s- 147 (465)
T KOG3846|consen 74 NSLGLMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPI---V-GAQENEVAVMNSLT-VNLHSLLIS- 147 (465)
T ss_pred cccccCchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhh---c-cCCchhhhhHhhhh-hHHHHHHHH-
Confidence 78999888888888887765 22 111 12222333444443333 3 23446788888765 344444333
Q ss_pred HHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHH
Q 010250 184 YYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDL 263 (514)
Q Consensus 184 ~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~l 263 (514)
.| +-.++|-||+.=.++|.......-+--.. .+.. ..+.++.--|.+-++... .+|+-+.
T Consensus 148 Fy---KPTekR~KILlE~kaFPSDhYAiesQ~~l----hG~~----------~e~sm~~iePREGEetlR---teDILd~ 207 (465)
T KOG3846|consen 148 FY---KPTEKRFKILLEKKAFPSDHYAIESQCKL----HGIS----------PENSMIQIEPREGEETLR---TEDILDT 207 (465)
T ss_pred hc---CCcchhhhhhhccCCCCchHHHHHhhhhh----cCCC----------hHHheEEecccccccchh---HHHHHHH
Confidence 22 12245677887777775432221110000 0000 001111111222222222 3566666
Q ss_pred HHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hh
Q 010250 264 ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KA 341 (514)
Q Consensus 264 i~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~ 341 (514)
|++.+ +.+|.|.+..+|--+|.... +.+|-..-+..|+++-+|=+|+ +|-. ......||+ |..|.. |-
T Consensus 208 IEkng-DeiA~v~fSGvqyYTGQ~Fd----i~aIT~Agq~kgc~VGfDLAHA-vgNV--pL~LHdWgV--DFACWCSYKY 277 (465)
T KOG3846|consen 208 IEKNG-DEIALVCFSGVQYYTGQYFD----IGAITFAGQFKGCLVGFDLAHA-VGNV--PLQLHDWGV--DFACWCSYKY 277 (465)
T ss_pred HHhcC-CeEEEEEeecceeecccccc----hhhhhhcccCCCcEechhhhhh-hcCC--ceEEeecCC--ceEEEeeecc
Confidence 66554 68999999999988887766 6666655556699999999987 6433 334455665 666643 64
Q ss_pred hcCCcccceeEEeCHHHHHHhhhcc---------------C--CCCcccccCCCCCcHHHHH-HHHHHHHHHhhccHHHH
Q 010250 342 LSSAYMPIGAILVSPEVSEVIHSQS---------------N--TLGSFSHGFTYSGHPVSCA-VAIEALKIYKERNIVEQ 403 (514)
Q Consensus 342 l~gG~~pig~v~~~~~i~~~l~~~~---------------~--~~~~~~~~~t~~~~pl~~a-aa~aal~~~~~~~~~~~ 403 (514)
+..|--.||++...+.......++- + .+.+...|+..+..|+-.. +....|++...-. .++
T Consensus 278 lnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~-~~~ 356 (465)
T KOG3846|consen 278 LNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFN-INE 356 (465)
T ss_pred cccCCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhh-HHH
Confidence 4333234666665443322111100 0 0001223344455555444 4456777776433 344
Q ss_pred HHHHH----HHHHhhhhhc--cCCCc---------e--eEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250 404 VNKIA----PKFQDGVKAF--SDSPI---------I--GEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 466 (514)
Q Consensus 404 ~~~~~----~~l~~~L~~l--~~~~~---------~--~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 466 (514)
++++. .++...++.. .+++. + ..+..+|.-+.+.|..+. ..+.++|.++|
T Consensus 357 lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp~-------------~~vfqeL~krG 423 (465)
T KOG3846|consen 357 LRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSPT-------------PKVFQELHKRG 423 (465)
T ss_pred HhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCCCc-------------hHHHHHHHHcC
Confidence 44443 4444444332 11121 1 123445666666665432 23668999999
Q ss_pred cEEEe-eCCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 467 MLVRV-SGDNIMMSP-PFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 467 v~~~~-~g~~iRi~p-~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
+++.. ..+.||++| |+..|-.|+-.++..|.+++..++
T Consensus 424 v~~DkR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 424 VIGDKRRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLE 463 (465)
T ss_pred eeccccCCCceEeecchhhccHHHHHHHHHHHHHHHHHhh
Confidence 99864 357899998 588999999999999999987664
No 375
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.28 E-value=0.00018 Score=72.03 Aligned_cols=333 Identities=13% Similarity=0.121 Sum_probs=165.0
Q ss_pred EccCCcccccCCCCCHHHHH-HHHHHHhcCCcccccc----ccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250 104 DSLAGLWCTALGGSEPRLVA-AATAQLNTLPFYHSFW----NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ 178 (514)
Q Consensus 104 D~~s~~~~~~lGh~~p~v~~-A~~~~l~~~~~~~~~~----~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A 178 (514)
++.|-+|.-+.+|--|.|++ -+.+.-+-+..|+++. .+..+...++--.++++. +-+....-....||.+-|++
T Consensus 75 ~~~sfiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLT-Gm~VANASm~DeaTAaAEAm 153 (450)
T COG0403 75 VFTSFIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLT-GLDVANASMLDEATAAAEAM 153 (450)
T ss_pred hhhhhccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHh-CCCcccchhhhhHHHHHHHH
Confidence 44444444556665555554 5444332222222211 011122233445556664 23334555666677666666
Q ss_pred HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250 179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258 (514)
Q Consensus 179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (514)
+..-|.. +.++++| +.+..-|-.+...+. .+-+++++ .+...++ .+.+
T Consensus 154 ~ma~r~~-----k~k~~~~-~V~~~vhpqt~~Vl~-----Tra~~~g~---~i~~~~~------------------~d~~ 201 (450)
T COG0403 154 LMAKRVT-----KKKRNKF-LVPKDVHPQTLDVLR-----TRAEGLGI---EIEVVDA------------------DDLD 201 (450)
T ss_pred HHHHHhh-----cCcCceE-EecCCCCHHHHHHHH-----hhcccCce---EEEEecc------------------chhh
Confidence 5443321 1223444 456666666544432 11222221 0111110 0234
Q ss_pred HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEE--echhcCcccccccceecccCCCCchh
Q 010250 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA--DEVICAFGRLGTMFGCDKYSIKPDLV 336 (514)
Q Consensus 259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~--DEv~tG~gr~G~~~~~~~~gv~pDiv 336 (514)
+|+.. ...++++++++-.+.-|+.+.. +++|.+.++++|+++|+ |=+--++ .-.++ ....||+
T Consensus 202 ~l~~~----~~~~~~gv~vQyP~~~G~~~~d----~~~l~~~~h~~~al~~v~aDplaL~L--L~pPG-----e~GADIv 266 (450)
T COG0403 202 DLESA----DDGDVFGVLVQYPNTFGIVEED----LRALIEAAHSAGALVIVAADPLALGL--LKPPG-----EFGADIV 266 (450)
T ss_pred hhhhc----cccCeEEEEEecCCCCCccchh----HHHHHHHHhhcCCEEEEEechhHhhc--cCCcc-----ccCCceE
Confidence 44443 2357899999887655434433 99999999999998884 3332222 11111 1224666
Q ss_pred c-----hhhhhcCCcccceeEEeCHHHHHHhhhccCCCCccc--c---------------------cCCCCCcHHHHHHH
Q 010250 337 S-----FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS--H---------------------GFTYSGHPVSCAVA 388 (514)
Q Consensus 337 ~-----~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~--~---------------------~~t~~~~pl~~aaa 388 (514)
+ ||=.|+=|+.-.|++.++++.+..+..+ -.|... + .+..+.|..-+|.+
T Consensus 267 vG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGR--lVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~ 344 (450)
T COG0403 267 VGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGR--LVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALA 344 (450)
T ss_pred EecCcccCCCcCCCCcceeeeeEhHhHhhcCCCc--eeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHH
Confidence 4 4444443434577888888886655321 001000 0 01112222222211
Q ss_pred HHHH-HHHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH
Q 010250 389 IEAL-KIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK 464 (514)
Q Consensus 389 ~aal-~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 464 (514)
.+.. -++-. .++.+++.++..++.++|++... ...+.....|--+.+.-.. .....+..+...
T Consensus 345 As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~---g~~~~~~~fFdt~~v~~~~----------~~~~~l~~~~~~ 411 (450)
T COG0403 345 ASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGA---GVELVFDHFFDTFTVRVPE----------EVAEALLAAAIA 411 (450)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCC---ceEeccccceeeEEEecch----------hHHHHHHHHHHh
Confidence 1111 12222 24567888889999999986510 0111111222222222110 134556677777
Q ss_pred CCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250 465 HGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKA 499 (514)
Q Consensus 465 ~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~ 499 (514)
.|+-++... +.+-++..-..|+++|+.+++.|...
T Consensus 412 ~G~~L~~~~~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 412 GGINLRRVDADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred cCCceeeecCCceEEEeecccCHHHHHHHHHHHhhh
Confidence 888887643 35677766788999999999988764
No 376
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.24 E-value=0.00018 Score=72.58 Aligned_cols=355 Identities=17% Similarity=0.191 Sum_probs=178.8
Q ss_pred eCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccc-cccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHH
Q 010250 96 DVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYH-SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEA 174 (514)
Q Consensus 96 d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~-~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA 174 (514)
|.||+.-+..+|+. ++.+ +|+..+-+.+.+.+....+ ..+........+.-..++.+|......--.-+.+||||
T Consensus 75 ~ld~~~~~~~vS~~--v~~~--~~~~~~l~~~~~~k~N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses 150 (491)
T KOG1383|consen 75 MLDGNPRLGLASGV--VYWG--EPELDKLIMEAYNKFNPLHPDEFPVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSES 150 (491)
T ss_pred ccCCCcccCeeeEE--EecC--CcchhhHHHHHHhhcCccCccccchhHHHHHHHHHHHHHHhcCCccccCccccccchH
Confidence 34566555555553 3344 5666666666666532222 23333445555666777777754321112336789999
Q ss_pred HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHH
Q 010250 175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYS 253 (514)
Q Consensus 175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 253 (514)
...+.|.-+.+.....+-.+..+++.. +-|-+-. .+..-|. -.+.++++. .+|+.
T Consensus 151 ~l~~~k~~~~~r~~~k~I~~p~iv~~~-~v~~a~e---------K~a~yf~---v~l~~V~~~~~~~~~----------- 206 (491)
T KOG1383|consen 151 GLAAKKSYRNRRKAQKGIDKPNIVTPQ-NVHAAFE---------KAARYFE---VELREVPLDEGDYRV----------- 206 (491)
T ss_pred HHHHHHHHHHHHHhccCCCCccccchH-HHHHHHH---------HHHhhEE---EEEEeeeccccceEe-----------
Confidence 888887665443331112233444432 1221100 0000111 111222221 23331
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh-cCCEEEEechhcCcccc-cccceecccCC
Q 010250 254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK-YDILFIADEVICAFGRL-GTMFGCDKYSI 331 (514)
Q Consensus 254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~-~gillI~DEv~tG~gr~-G~~~~~~~~gv 331 (514)
|+..+.+.+. +++.+++.+-.+-..|.+-+ .++|.++..| |++.+.+|-.-.||--. |. .....|+.
T Consensus 207 --D~~k~~~~i~----eNti~lv~~~~~~p~G~~e~----ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~-~~~~~fdF 275 (491)
T KOG1383|consen 207 --DPGKVVRMID----ENTIMLVGSLPNFPTGEIED----VEKLADLLLEIWDIPIHVDACLGGFINPAGY-LNEEEFDF 275 (491)
T ss_pred --cHHHHHHHhc----cceEEEEEEcCCCCccchhh----HHHHHHHHHHHhCCceeecccCccccccccc-cCcccccc
Confidence 1233333343 67888888887777788866 9999999999 99999999988887321 21 11223333
Q ss_pred C-C---chhchh-h-hhcCCcccceeEEeC-HHH-HHHhhhccCCCCcccccCCCCCc--HHHHHHHHHHHHHHhhcc--
Q 010250 332 K-P---DLVSFA-K-ALSSAYMPIGAILVS-PEV-SEVIHSQSNTLGSFSHGFTYSGH--PVSCAVAIEALKIYKERN-- 399 (514)
Q Consensus 332 ~-p---Div~~s-K-~l~gG~~pig~v~~~-~~i-~~~l~~~~~~~~~~~~~~t~~~~--pl~~aaa~aal~~~~~~~-- 399 (514)
. | .+-+-+ | +|.- ..+|+++-+ +++ .+.+.-.....|......|..++ ..-.++..+++=.+.+++
T Consensus 276 r~p~V~Sisa~~HKYGl~~--~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~ 353 (491)
T KOG1383|consen 276 RVPGVTSISADGHKYGLAP--AGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYR 353 (491)
T ss_pred CCCCceeEeeccceeeeee--cCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHH
Confidence 2 2 222222 3 3332 235666654 333 22222111222322333344333 112333444444444444
Q ss_pred -HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe--eCCEE
Q 010250 400 -IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV--SGDNI 476 (514)
Q Consensus 400 -~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~--~g~~i 476 (514)
..+++.+....|+++++++....+++ . +.+++.+.+...-. --++...|.+.|..+-. ....+
T Consensus 354 ~~~~~ive~~~~l~egie~i~~i~i~g----k-p~vs~~~~~s~~~~---------i~elsd~l~~~GW~lnalq~P~a~ 419 (491)
T KOG1383|consen 354 ENTQNIVETARKLREGIENIKGIKIVG----K-PLVSFILFGSNDVN---------IFELSDLLRKKGWILNALQFPAAI 419 (491)
T ss_pred HHHHHHHHHHHHHHHhhhccccceecC----C-CcEEEEEccCCccc---------hhhhhHHHHhcCcCccccCCCCce
Confidence 35667778888999998864333332 2 23344333322111 22467888899977641 12233
Q ss_pred EEeCCCCCCHHH-HHHHHHHHHHHHHHHHH
Q 010250 477 MMSPPFIMSPEE-VDELISKYGKALKATEE 505 (514)
Q Consensus 477 Ri~p~~~~t~e~-id~~~~~l~~~l~~~~~ 505 (514)
-++....+..++ .|+++.-|+++++++..
T Consensus 420 Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~ 449 (491)
T KOG1383|consen 420 HICVTRVHAREDVADRFVADIRKVVEELKS 449 (491)
T ss_pred EEEEEeeeccHHHHHHHHHHHHHHHHHHHh
Confidence 333335566655 57777778888877654
No 377
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.24 E-value=0.00022 Score=79.90 Aligned_cols=202 Identities=13% Similarity=0.140 Sum_probs=113.7
Q ss_pred cEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc-----hhhhhcCC
Q 010250 271 TIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS-----FAKALSSA 345 (514)
Q Consensus 271 ~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~-----~sK~l~gG 345 (514)
+++++++. .++..|.+.. +++|.++++++|+++|++--...++-.-.+ . ....||++ ||=.+++|
T Consensus 194 ~~~~v~~q-~Pn~~G~ied----~~~i~~~~h~~gal~~~~ad~~al~ll~~P---g--e~GaDi~vg~~q~fg~p~g~G 263 (939)
T TIGR00461 194 DVFGCLLQ-YPATDGSILD----YKQLIDALHSHKSLVSVAADLMALTLLTPP---G--HYGADIVLGSSQRFGVPMGYG 263 (939)
T ss_pred CEEEEEEE-CCCCCeEEec----HHHHHHHHHHcCCEEEEEechHHhCCcCCH---H--HcCCcEEeeCCCccCCCCCCC
Confidence 46666553 3455677764 899999999999999986544322111111 1 12347763 33345555
Q ss_pred cccceeEEeCHHHHHHhhhccC-----CCC--ccc--------cc----CC--CCCcHHHHH-HHHHHHHHHhhcc---H
Q 010250 346 YMPIGAILVSPEVSEVIHSQSN-----TLG--SFS--------HG----FT--YSGHPVSCA-VAIEALKIYKERN---I 400 (514)
Q Consensus 346 ~~pig~v~~~~~i~~~l~~~~~-----~~~--~~~--------~~----~t--~~~~pl~~a-aa~aal~~~~~~~---~ 400 (514)
+--.|++.+++++...+..+-- ..| .+. |. .| .+.+...++ .|..-+..+..++ +
T Consensus 264 GP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~i 343 (939)
T TIGR00461 264 GPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNI 343 (939)
T ss_pred CCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHH
Confidence 4447778888888776643100 000 000 00 00 011111111 1111134443343 4
Q ss_pred HHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCEEEEe
Q 010250 401 VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIMMS 479 (514)
Q Consensus 401 ~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~iRi~ 479 (514)
.+++..+..++.++|.+. ....+.. ..+--+.+.-... ....+.+.+.++|+.++.. ++.++++
T Consensus 344 A~~~~~~a~~l~~~L~~~-G~~~~~~----~fF~~~~v~~~~~----------~~~~i~~~~~~~gi~l~~~~~~~i~~s 408 (939)
T TIGR00461 344 ARRIHSLTSILANGLEND-PHELINK----TWFDTLTVKVGNG----------ISSELLKAAEEFNINLRAVDTTTVGIA 408 (939)
T ss_pred HHHHHHHHHHHHHHHHhC-CCcccCC----CccceEEEEeCCC----------CHHHHHHHHHHCCCeeeecCCCEEEEE
Confidence 567788888999988874 2222211 1111222211100 1456889999999998864 4579999
Q ss_pred CCCCCCHHHHHHHHHHHH
Q 010250 480 PPFIMSPEEVDELISKYG 497 (514)
Q Consensus 480 p~~~~t~e~id~~~~~l~ 497 (514)
..-..|++||+.+++.|.
T Consensus 409 ~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 409 LDETTTKADVENLLKVFD 426 (939)
T ss_pred eecCCCHHHHHHHHHHhc
Confidence 999999999999999995
No 378
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.15 E-value=3.7e-06 Score=83.41 Aligned_cols=231 Identities=16% Similarity=0.141 Sum_probs=55.0
Q ss_pred ccCCCC--CHHHHHHHHHHHhcCCccc-ccc-ccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHh
Q 010250 112 TALGGS--EPRLVAAATAQLNTLPFYH-SFW-NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNN 187 (514)
Q Consensus 112 ~~lGh~--~p~v~~A~~~~l~~~~~~~-~~~-~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~ 187 (514)
.|||-+ +|++.+++.+.+..+...- ..- +.--.....+++.++.++ +.+.+++.|+...|+..++....
T Consensus 11 TnLGRs~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~lt---gAeaA~VvNnnaAAv~L~l~~la---- 83 (367)
T PF03841_consen 11 TNLGRSPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELT---GAEAALVVNNNAAAVLLALNTLA---- 83 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccc----
Confidence 567764 5788888877665422110 000 000011233455666654 45678899998888888876442
Q ss_pred hcCCCCccEEEEEecC---Ccc--cceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHH
Q 010250 188 ALGRPNKKKFIARQKS---YHG--STLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 262 (514)
Q Consensus 188 ~~~~~~~~~ii~~~~~---yHG--~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~ 262 (514)
.++ .||+..|- +-| +....+..+|..... +... ....+.|.++
T Consensus 84 ----~~~-EvIvsRGelVeiGgsFRip~vm~~sGa~lvE------------VGtt---------------N~t~~~Dye~ 131 (367)
T PF03841_consen 84 ----KGK-EVIVSRGELVEIGGSFRIPDVMRQSGARLVE------------VGTT---------------NRTHLSDYEK 131 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----ccc-ccccccccccccccccccccccccccccccc------------cccc---------------cccccccccc
Confidence 233 34433221 111 112222223321111 0000 0111466777
Q ss_pred HHHHhCCCcEEEEEEccccCC-CCc-ccCChhHHHHHHHHHHhcCCEEEEechhc------CcccccccceecccCCCCc
Q 010250 263 LILKEGPETIAAFIAEPVIGA-GGV-IPPPATYFEKVQAVVKKYDILFIADEVIC------AFGRLGTMFGCDKYSIKPD 334 (514)
Q Consensus 263 li~~~~~~~~aavivEpv~~~-~G~-~~p~~~~L~~l~~l~~~~gillI~DEv~t------G~gr~G~~~~~~~~gv~pD 334 (514)
.|. +++-+.+-+-+.+-. .|. -.++ ++++.+++++||+++|.|-.-. .+|-.++.-..+.....+|
T Consensus 132 AI~---e~Ta~ll~Vh~Sn~~i~GFt~~~~---~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaD 205 (367)
T PF03841_consen 132 AIT---ENTAALLKVHTSNFRIQGFTGEVS---LEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGAD 205 (367)
T ss_dssp -----------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-S
T ss_pred ccc---cccccccccccccccccccccccc---HHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCC
Confidence 775 233344456544332 121 1222 8999999999999999996431 1222222222333444589
Q ss_pred hhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh
Q 010250 335 LVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK 396 (514)
Q Consensus 335 iv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~ 396 (514)
+|+|| |-|+| ...|.+++++++++.++.+ ..+-.+-.+-+.+++-.++|+.+.
T Consensus 206 lV~fSGdKlLGG--PQaGiI~Gkk~lI~~lk~~-------pl~RalrvdK~tla~L~atL~~Y~ 260 (367)
T PF03841_consen 206 LVTFSGDKLLGG--PQAGIIVGKKELIEKLKKH-------PLGRALRVDKLTLAALEATLRLYL 260 (367)
T ss_dssp EEEEETTSSSSS---S-EEEEEEHHHHHHHHHH-------HHTTT-B--HHHHHHHHHHHHH--
T ss_pred EEEEECCCcCCC--CCeEEEEeCHHHHHHHhhC-------CCcceEeeCHHHHHHHHHHHHHHH
Confidence 99998 78887 4578999999999999753 122345567788888888888665
No 379
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.11 E-value=0.00013 Score=74.88 Aligned_cols=199 Identities=15% Similarity=0.187 Sum_probs=93.0
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEech----hcCcccccccceecccCCCCchhc-----hhh
Q 010250 270 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV----ICAFGRLGTMFGCDKYSIKPDLVS-----FAK 340 (514)
Q Consensus 270 ~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv----~tG~gr~G~~~~~~~~gv~pDiv~-----~sK 340 (514)
+++++|++.-.+. -|.+.. +++|.++++++|+++|+ -+ .+++-+-|. + ..||++ ||=
T Consensus 196 ~~~a~v~vq~Pn~-~G~~ed----~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge------~--GADI~vg~~Q~fg~ 261 (429)
T PF02347_consen 196 DDTAAVMVQNPNT-FGVFED----IKEIADIAHAAGALVIV-GADPNALGGLKSPGE------Y--GADIVVGEHQTFGI 261 (429)
T ss_dssp TTEEEEEEESS-T-TSB--T----HHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGG------G--T-SEEEECCTTTT-
T ss_pred cCeEEEEeecCCC-CceEee----HHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhh------c--CccEEeeCCCCCcc
Confidence 6899999876654 466654 99999999999999997 22 112222222 2 247763 444
Q ss_pred hhcCCcccceeEEeCHHHHHHhhhcc-----CCCC--ccc--------c------cCCCCCcHHHHH-HHHHHHHHHhhc
Q 010250 341 ALSSAYMPIGAILVSPEVSEVIHSQS-----NTLG--SFS--------H------GFTYSGHPVSCA-VAIEALKIYKER 398 (514)
Q Consensus 341 ~l~gG~~pig~v~~~~~i~~~l~~~~-----~~~~--~~~--------~------~~t~~~~pl~~a-aa~aal~~~~~~ 398 (514)
.+++|+-..|.+.++++++..+..+- ...| .+. | .+..+.|...++ ++..-+-.+-.+
T Consensus 262 p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~ 341 (429)
T PF02347_consen 262 PMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPE 341 (429)
T ss_dssp --CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHH
Confidence 56666556788888988777664310 0000 000 0 012233433333 222333444443
Q ss_pred ---cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe-eCC
Q 010250 399 ---NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV-SGD 474 (514)
Q Consensus 399 ---~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~-~g~ 474 (514)
++.+++..+..++.++|+++...++.. . .++-+.+..... .....+.+++...|+.... ..+
T Consensus 342 GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~----~-~f~e~v~~~~~~---------~~~~~l~~~~~~~gl~~~~~~~~ 407 (429)
T PF02347_consen 342 GLREIAERIHLNAHYLAERLKKIYGLPFDN----P-FFFEFVVVFSKD---------KEVEELLKRGIEGGLNLRYPDDG 407 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCTTBECSSS----S-SBSSEEEEESS----------HHHHHHHHTT----EEEGGG-SS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcccCC----C-CceeeeeecCCc---------HHHHHHHHHHHhcCCCccccCCC
Confidence 356778888999999998751112111 1 111111111110 0122344555555643332 235
Q ss_pred EEEEeCCCCCCHHHHHHHHHHH
Q 010250 475 NIMMSPPFIMSPEEVDELISKY 496 (514)
Q Consensus 475 ~iRi~p~~~~t~e~id~~~~~l 496 (514)
.+-+++.-..|+||||.++++|
T Consensus 408 ~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 408 ALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp EEEEE--TT--HHHHHHHHH--
T ss_pred eEEEEccCCCCHHHHHHHHhcC
Confidence 7899998999999999999875
No 380
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.10 E-value=6.7e-05 Score=74.72 Aligned_cols=318 Identities=15% Similarity=0.203 Sum_probs=156.1
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhc----CCCC-ccEEEEEecCCcccceeeeecCCCccccC
Q 010250 148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNAL----GRPN-KKKFIARQKSYHGSTLIAASLSGLPALHQ 222 (514)
Q Consensus 148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~----~~~~-~~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 222 (514)
+.-.++.+..+...-..-+|+++|+-+|..|+.+|+.-+... |... +.-|++.+.--|=+...+...-|.
T Consensus 145 ~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~----- 219 (510)
T KOG0629|consen 145 EVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGL----- 219 (510)
T ss_pred HHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhcc-----
Confidence 344455555443222467899999999999999997432111 1111 233444444444432222211111
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCC--CcccCChhHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAG--GVIPPPATYFEKVQAV 300 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~--G~~~p~~~~L~~l~~l 300 (514)
+ ...+..+++. +-+....+|||+.|.+...+.---+++...-|++ |.+-| |..|.++
T Consensus 220 --g--td~c~~v~t~-------------e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd----L~~iadi 278 (510)
T KOG0629|consen 220 --G--TDHCIKVKTD-------------ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD----LNGIADI 278 (510)
T ss_pred --C--CceeEEeccc-------------ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc----HHHHHHH
Confidence 0 1112222221 1223346899998876432211113333333433 66665 9999999
Q ss_pred HHhcCCEEEEechhcCccccccccee----cccCCC-Cchhchh--hhhcCCcccceeEEeCHHH-HHHhhhccC----C
Q 010250 301 VKKYDILFIADEVICAFGRLGTMFGC----DKYSIK-PDLVSFA--KALSSAYMPIGAILVSPEV-SEVIHSQSN----T 368 (514)
Q Consensus 301 ~~~~gillI~DEv~tG~gr~G~~~~~----~~~gv~-pDiv~~s--K~l~gG~~pig~v~~~~~i-~~~l~~~~~----~ 368 (514)
|++|+.++++|.+-.|- -.... ...|++ .|-|+.. |-++.+ ++.|+.+.+.+= ++.-.+... +
T Consensus 279 C~k~~lWmHvDAAwGGg----lLmS~k~R~kl~Giera~SvtwnpHK~~gap-lqCsa~l~r~~gll~~Cn~~~A~YLFq 353 (510)
T KOG0629|consen 279 CEKHKLWMHVDAAWGGG----LLMSRKHRHKLTGIERANSVTWNPHKLMGAP-LQCSAFLTREEGLLQRCNQMSAIYLFQ 353 (510)
T ss_pred HHhcCEEEEeecccccc----cccChhhHhhccCccccCceeecHHHhhcCc-chhhHHHHHHHHHHHhhcccchhhhhc
Confidence 99999999999886541 11111 223554 5666665 777766 788888877653 322211000 0
Q ss_pred CCccc-ccCCCCCcHHHHHHHHHHHHH---Hhh---cc---HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEE
Q 010250 369 LGSFS-HGFTYSGHPVSCAVAIEALKI---YKE---RN---IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEF 438 (514)
Q Consensus 369 ~~~~~-~~~t~~~~pl~~aaa~aal~~---~~~---~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~ 438 (514)
...+. .++-.+--.+-|-.-.-..+. .+. ++ -++++-+++++|.++|++-.....+...... ...+.|
T Consensus 354 ~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe--~~nv~f 431 (510)
T KOG0629|consen 354 QDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPE--HVNVCF 431 (510)
T ss_pred cCceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCc--eEEEee
Confidence 00111 111111111112111111111 111 22 3566777889999999875322211111111 222322
Q ss_pred ccCCCCCCCCC-------CccchHHHHHHHHHHCCcEEE---eeC---CEEE--EeCCCCCCHHHHHHHHHHHHHH
Q 010250 439 ADNKSPNEPFP-------PEWGIGAYFGAQCEKHGMLVR---VSG---DNIM--MSPPFIMSPEEVDELISKYGKA 499 (514)
Q Consensus 439 ~~~~~~~~~~~-------~~~~~~~~~~~~l~~~Gv~~~---~~g---~~iR--i~p~~~~t~e~id~~~~~l~~~ 499 (514)
.-....-...+ .-..++-.+...|.++|.... |.+ +.+| +++| +.+++|+|.+++.|++.
T Consensus 432 w~vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~-a~~~ad~dflldEIerl 506 (510)
T KOG0629|consen 432 WYVPPSLRGWQENPERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNP-ALTEADLDFLLDEIERL 506 (510)
T ss_pred ccCchHhccCcccchhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccc-hhhhhhHHHHHHHHHHh
Confidence 21111000001 111233446677888885543 333 4455 4555 78999999999988764
No 381
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=97.94 E-value=0.00086 Score=67.36 Aligned_cols=220 Identities=16% Similarity=0.197 Sum_probs=107.9
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc-ccee---cccCC-
Q 010250 257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MFGC---DKYSI- 331 (514)
Q Consensus 257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~-~~~~---~~~gv- 331 (514)
.+.+|+.+++.+++.+.+|+.-+. +..|..+. -+++|.++|++|||..|+--+|+ +- .-+ .-.. ...|.
T Consensus 141 ~~~ie~~i~~~G~~~iLcvlttts-cfapr~~D---~i~~IakiC~~~~IPhlvNnAYg-vQ-~~~~~~~i~~a~~~GRv 214 (389)
T PF05889_consen 141 LEAIEAKIEELGADNILCVLTTTS-CFAPRLPD---DIEEIAKICKEYDIPHLVNNAYG-VQ-SSKCMHLIQQAWRVGRV 214 (389)
T ss_dssp HHHHHHHHHHHCGGGEEEEEEESS-TTTTB-------HHHHHHHHHHHT--EEEEGTTT-TT--HHHHHHHHHHHHHSTC
T ss_pred HHHHHHHHHHhCCCCeEEEEEecC-ccCCCCCc---cHHHHHHHHHHcCCceEEccchh-hh-HHHHHHHHHHHHhcCCc
Confidence 477888887777666766665443 33343433 39999999999999999999885 50 000 0000 01121
Q ss_pred CCchhchhhhhcCCcccce-e-EEe-CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHH
Q 010250 332 KPDLVSFAKALSSAYMPIG-A-ILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVN 405 (514)
Q Consensus 332 ~pDiv~~sK~l~gG~~pig-~-v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~~~~~ 405 (514)
+.++-.+.|.|- .|+| + +.+ ++..++.+... +++ -. +.+|. .-...+|..+-. ..+.....
T Consensus 215 da~vqS~dkNF~---VPvGgai~As~~~~~i~~vs~~--YpG-----Ra-s~sp~--ld~~itLl~LG~~g~~~ll~~r~ 281 (389)
T PF05889_consen 215 DAFVQSTDKNFM---VPVGGAIMASFDPSGILAVSKE--YPG-----RA-SASPS--LDLFITLLSLGCTGYGALLKERK 281 (389)
T ss_dssp SEEEEEHHHHHC---EESSHEEEEESSHHHHHHHHHT--SHS-----HB-TSHHH--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeeecCCCEE---ecCCCcEEEecCHHHHHHHHHH--hhh-----hh-hcccc--hHHHHHHHHHhhhHHHHHHHHHH
Confidence 122235667553 2222 2 223 45666666531 111 11 12221 111222222221 22344444
Q ss_pred HHHHHHHhhhhhc-cCCC-ceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE----eeC------
Q 010250 406 KIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----VSG------ 473 (514)
Q Consensus 406 ~~~~~l~~~L~~l-~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~g------ 473 (514)
+.-.+++++|+++ .++. .+.+.+.....+++.+..-... .......|...|..+||--. +.+
T Consensus 282 ~~f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~------~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh 355 (389)
T PF05889_consen 282 ASFPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYEI------SQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSH 355 (389)
T ss_dssp HHHHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTC------CSSHHHHHHHHHHHTTEESSEEEETSSCEEETT
T ss_pred HHHHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchhh------ccchhhhHHHHHHhCCcccceeeccCCCccccc
Confidence 4455555555554 2222 1112222233345555422111 00235678889999976421 111
Q ss_pred ------CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 474 ------DNIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 474 ------~~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
..+-++-.+-+++||||.++++|+++++
T Consensus 356 ~~~yp~~Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 356 SSNYPCPYLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp SS--SSSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred CCCCchHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 4577777788999999999999999875
No 382
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.87 E-value=0.0043 Score=61.37 Aligned_cols=201 Identities=17% Similarity=0.127 Sum_probs=123.1
Q ss_pred EEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCC-CCchhchh--hhhcCCccc
Q 010250 272 IAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI-KPDLVSFA--KALSSAYMP 348 (514)
Q Consensus 272 ~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv-~pDiv~~s--K~l~gG~~p 348 (514)
.+-|...+.....|+..++..+. -. +.++|+|-.-.-++| ..++ +-|++.+| |.+|+. .
T Consensus 145 ~ayv~~~~NeTi~Gv~v~~~p~~------~~--~~~~v~D~SS~ilsr--------~iDvsk~dviyagaQKnlGpa--G 206 (365)
T COG1932 145 DAYVHFCWNETISGVEVPELPDI------GS--DGLLVADASSAILSR--------PIDVSKYDVIYAGAQKNLGPA--G 206 (365)
T ss_pred ccEEEEecCCcccceEccCCCCC------CC--CceEEEecccHHhcC--------CCChhHcceEEEehhhccCcc--c
Confidence 44466666666667776642221 11 278999965442322 1222 24778877 899884 3
Q ss_pred ceeEEeCHHHHHHhhhccC-----CCCcccccCCCCCcHHHH-HHHHHHHHHHhhcc----HHHHHHHHHHHHHhhhhhc
Q 010250 349 IGAILVSPEVSEVIHSQSN-----TLGSFSHGFTYSGHPVSC-AVAIEALKIYKERN----IVEQVNKIAPKFQDGVKAF 418 (514)
Q Consensus 349 ig~v~~~~~i~~~l~~~~~-----~~~~~~~~~t~~~~pl~~-aaa~aal~~~~~~~----~~~~~~~~~~~l~~~L~~l 418 (514)
++.++.++++++.+..... .......++||+.+|.-| .....+++.+++.+ +.++-++..+.|.+.+++-
T Consensus 207 ltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s 286 (365)
T COG1932 207 LTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKS 286 (365)
T ss_pred eEEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 8999999999888754210 001234567887766543 34446778887643 5667777777888877654
Q ss_pred cCC-CceeEEEeeeee-EEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---CCEEEEeCCCCCCHHHHHHHH
Q 010250 419 SDS-PIIGEIRGTGLI-LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GDNIMMSPPFIMSPEEVDELI 493 (514)
Q Consensus 419 ~~~-~~~~~v~g~g~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~~iRi~p~~~~t~e~id~~~ 493 (514)
.-+ +.+.. ..++.| +.|.+.+. .+.+.|..++.++|+..-.+ .+.+|.+.--.++.|+++.++
T Consensus 287 ~fy~~~v~~-~~RS~mnV~f~~~~~-----------~ld~~fv~eae~~gl~~lkGhr~vgGmRasiynA~~~e~veaL~ 354 (365)
T COG1932 287 DFYRNLVAK-ANRSRMNVTFTLVDA-----------ELDKGFVAEAEAAGLIYLKGHRSVGGLRASIYNAVPLEDVEALT 354 (365)
T ss_pred Cccccccch-hhccceeEEEEcCcH-----------HHHHHHHHHHHHcCCceeccccCCCceeeeeecCCCHHHHHHHH
Confidence 111 12222 223333 23444422 24567888888888876532 234999887789999999999
Q ss_pred HHHHHHHHH
Q 010250 494 SKYGKALKA 502 (514)
Q Consensus 494 ~~l~~~l~~ 502 (514)
+-++.+.++
T Consensus 355 ~fm~~f~~~ 363 (365)
T COG1932 355 DFMDWFEET 363 (365)
T ss_pred HHHHHHHHh
Confidence 988877654
No 383
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=97.85 E-value=0.0041 Score=65.50 Aligned_cols=162 Identities=18% Similarity=0.224 Sum_probs=91.4
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEE-eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC-cc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFF-TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PA 219 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~-~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~ 219 (514)
+..+..|..+..++.| +.++.+| .||-|.||...+..+. ++.+.|.++.+.|-+...++.++|. |.
T Consensus 68 p~G~i~eAqe~aA~~f---gAd~tyFvvNGTS~ank~vi~a~~---------~~GD~VLvdRN~HKSi~~glilaGa~Pv 135 (557)
T COG1982 68 PEGPIKEAQELAARVF---GADHTYFVVNGTSTANKAVINAVL---------TPGDKVLVDRNCHKSIHHGLILAGATPV 135 (557)
T ss_pred CCccHHHHHHHHHHHh---CCCceEEEECCccHHHHHHHHhhc---------CCCCEEEecCCccHHHHHHHHHcCCceE
Confidence 4455677777777777 4466666 5555555555554442 3345666788888887666666664 44
Q ss_pred ccCCCCCC-CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250 220 LHQKFDLP-APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 298 (514)
Q Consensus 220 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~ 298 (514)
|......+ .... .+.+ .+.+++.+.+....+..+|+..|.+ .|+... +++|.
T Consensus 136 yl~p~~np~~gi~-------------ggI~--------~~~~~~~l~~~~~~~k~~vitnpTY--dGv~~n----~~~i~ 188 (557)
T COG1982 136 YLEPSRNPLYGII-------------GGIP--------LETFKEALLAHPDAEKLAVITNPTY--DGVCYN----LRKIV 188 (557)
T ss_pred EecCCCCcccccc-------------CCCC--------HHHHHHHHHhChhhheeEEEecCcc--ceEeec----HHHHH
Confidence 33221111 0000 0111 3445554443322226788887764 355555 89999
Q ss_pred HHHHhcCCEEEEechhcCc--ccccccceecccCCCCchhchh--hhhcC
Q 010250 299 AVVKKYDILFIADEVICAF--GRLGTMFGCDKYSIKPDLVSFA--KALSS 344 (514)
Q Consensus 299 ~l~~~~gillI~DEv~tG~--gr~G~~~~~~~~gv~pDiv~~s--K~l~g 344 (514)
+.+.++++++.+||.+- + +..+.. .-...+-..|++|-| |-+++
T Consensus 189 ~~~~~~~a~v~~deah~-~~~~~~~~l-~~~~~~~~~~~~tqS~HK~l~a 236 (557)
T COG1982 189 ELLHHYGAWVLYDEAHP-AHFDFSPML-PESALNGGADFVTQSTHKLLAA 236 (557)
T ss_pred HHHhhcCceEEhhhcCc-ccccccccC-cchhhhcCceEEEechhhhhhh
Confidence 99999999999999985 3 222211 111222235677666 55554
No 384
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.68 E-value=0.0048 Score=69.13 Aligned_cols=197 Identities=11% Similarity=0.083 Sum_probs=109.4
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEe--ch-hcCcccccccceecccCCCCchhc-----hhhh
Q 010250 270 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIAD--EV-ICAFGRLGTMFGCDKYSIKPDLVS-----FAKA 341 (514)
Q Consensus 270 ~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~D--Ev-~tG~gr~G~~~~~~~~gv~pDiv~-----~sK~ 341 (514)
+++++|++.-.+ .-|.+.. +++|.+++++.|+++|+- =. .+.+-.-|. ...||++ ||=.
T Consensus 207 ~~~~~v~vq~P~-~~G~i~d----~~~i~~~~h~~gal~~~~~d~laL~ll~~Pge--------~GADI~vG~~Q~fGvp 273 (954)
T PRK12566 207 HAVFGALLQYPD-THGEIRD----LRPLIDQLHGQQALACVAADLLSLLVLTPPGE--------LGADVVLGSTQRFGVP 273 (954)
T ss_pred CCEEEEEEECCC-CceEEcc----HHHHHHHHHHcCCEEEEEeCHHHHhCCCChhh--------cCCcEEeeCCCcCCCC
Confidence 468888885433 4466754 899999999999998732 11 111111111 2347763 4445
Q ss_pred hcCCcccceeEEeCHHHHHHhhhccCCCCcc-----ccc------------------CCCCCcHHHHHHHHHHHHHH-hh
Q 010250 342 LSSAYMPIGAILVSPEVSEVIHSQSNTLGSF-----SHG------------------FTYSGHPVSCAVAIEALKIY-KE 397 (514)
Q Consensus 342 l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~-----~~~------------------~t~~~~pl~~aaa~aal~~~-~~ 397 (514)
|+.|+--.|++.++++++..+..+ -.|.. ..+ +..+.+..-+|.+.+..-.+ -.
T Consensus 274 ~~~GGP~ag~~a~~~~~~R~~PGR--ivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp 351 (954)
T PRK12566 274 MGYGGPHAAYFACRDDYKRAMPGR--IIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGP 351 (954)
T ss_pred CCCCCCCeeeeeehHHHHhhCCCC--ccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhCh
Confidence 555644477778888877665421 01100 000 11112222222222222122 22
Q ss_pred cc---HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-C
Q 010250 398 RN---IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-G 473 (514)
Q Consensus 398 ~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g 473 (514)
++ +.+++..+..++.++|.+. .+.... ...|--+.+.-.. ....+.+...+.|+-++.. .
T Consensus 352 ~Gl~~ia~~~~~~a~~l~~~l~~~-g~~~~~----~~fF~~~~v~~~~-----------~~~~~~~~a~~~~~n~r~~~~ 415 (954)
T PRK12566 352 EGLKRIAQRVHRLTAILAAGLEAK-GIKRLN----RHFFDTLTLEVGG-----------AQAAIIESAEAARINLRILGR 415 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-CCcccc----CCccceEEEEccC-----------CHHHHHHHHHHCCCeeEEeCC
Confidence 33 3556777888899988874 222211 1122222221110 1345778888999998865 4
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHH
Q 010250 474 DNIMMSPPFIMSPEEVDELISKYG 497 (514)
Q Consensus 474 ~~iRi~p~~~~t~e~id~~~~~l~ 497 (514)
+.+.++.--.+|++||+.++.+|.
T Consensus 416 ~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 416 GRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred CeEEEEeCCCCCHHHHHHHHHHhc
Confidence 568888778899999999999994
No 385
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=97.65 E-value=0.0045 Score=61.35 Aligned_cols=213 Identities=12% Similarity=0.108 Sum_probs=104.0
Q ss_pred CCHHHHHHHHHH-HhcCCcc-ccccccCCchHHHHHHHHHHhcCcCCCCeEEE---eCChhHHHHHHHHHHHHHHhhcCC
Q 010250 117 SEPRLVAAATAQ-LNTLPFY-HSFWNRTTKPSLDLAKELLEMFTASKMAKVFF---TNSGSEANDTQVKLVWYYNNALGR 191 (514)
Q Consensus 117 ~~p~v~~A~~~~-l~~~~~~-~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~---~~sGseA~~~Alk~a~~~~~~~~~ 191 (514)
|..+|++|+++. +....+. ++-|+....-+..|++-.++.| +.+..++ ..|||.|+..|+....
T Consensus 25 Nq~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vf---gaE~ALVRpq~vSGTHAi~~~Lfg~L-------- 93 (403)
T PF06838_consen 25 NQLKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVF---GAEDALVRPQFVSGTHAIALALFGVL-------- 93 (403)
T ss_dssp HHHHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHC---T-SEEEEETTS-SHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHh---CchhhhhcccccchHHHHHHHHHhcC--------
Confidence 456777777663 2222221 2333323333445666667777 4456666 5699999999998764
Q ss_pred CCccEEEEEecCCcccceeeeecCCC-ccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCC
Q 010250 192 PNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPE 270 (514)
Q Consensus 192 ~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~ 270 (514)
...+++++..|.=--.....+...+. +.....+++... .++..+ -...+.+.+++.+. +
T Consensus 94 rpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~---~v~L~~-------------dg~~D~~~i~~~~~----~ 153 (403)
T PF06838_consen 94 RPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYR---EVPLTE-------------DGTIDWEAIKKALK----P 153 (403)
T ss_dssp -TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEE---E--B-T-------------TSSB-HHHHHHHHH----T
T ss_pred CCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeE---EEeecC-------------CCCcCHHHHHHhhc----c
Confidence 23456666543211111111111111 111122221111 111100 01112466777665 4
Q ss_pred cEEEEEEccccCCCCcccCChhHHHHHHHHHHhc--CCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCc
Q 010250 271 TIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY--DILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAY 346 (514)
Q Consensus 271 ~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~--gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~ 346 (514)
++..|.+-=.-|-.---..+-+.++++.++.++. ++++.+|..|..|-- ..+...+-.|++ ++=|..|||+
T Consensus 154 ~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE-----~~EP~~vGADl~aGSLIKNpGGgi 228 (403)
T PF06838_consen 154 NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVE-----TQEPTEVGADLMAGSLIKNPGGGI 228 (403)
T ss_dssp TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTS-----SS-GGGGT-SEEEEETTSGGGTTT
T ss_pred CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceecc-----ccCccccchhheeccceeCCCCCc
Confidence 5677766444332222222334566666666654 789999998876622 234445667888 5779999999
Q ss_pred ccce-eEEeCHHHHHHhhhc
Q 010250 347 MPIG-AILVSPEVSEVIHSQ 365 (514)
Q Consensus 347 ~pig-~v~~~~~i~~~l~~~ 365 (514)
.|.| ++++++++++....+
T Consensus 229 AptGGYIaGr~~lVe~~a~R 248 (403)
T PF06838_consen 229 APTGGYIAGRKDLVERAAYR 248 (403)
T ss_dssp -SS-EEEEESHHHHHHHHHH
T ss_pred cCcCCEEechHHHHHHHHhh
Confidence 8876 577899999887543
No 386
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=97.19 E-value=0.14 Score=52.33 Aligned_cols=222 Identities=16% Similarity=0.158 Sum_probs=110.4
Q ss_pred HHHHHHHHHhC-CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceeccc-----CC
Q 010250 258 NNLEDLILKEG-PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKY-----SI 331 (514)
Q Consensus 258 ~~le~li~~~~-~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~-----gv 331 (514)
+.|++.|.+.. ..-+-.+++ ...|++|.-.. +.|.+|..+|+++|++|.+|.+|+|- .+.++.+ |+
T Consensus 220 ~~L~~AIe~D~arGlIPf~v~-at~GTT~~ca~--D~l~elg~Vc~~~glWLHVDAAYAGs-----a~iCpE~r~l~rGi 291 (511)
T KOG0628|consen 220 DTLRKAIEEDIARGLIPFFVC-ATLGTTSSCAF--DELEELGPVCREEGLWLHVDAAYAGS-----AFICPEFRYLMRGI 291 (511)
T ss_pred HHHHHHHHHHHhCCCccEEEE-EeecCcccccc--ccHHHhcchhhhcCEEEEeehhhccc-----cccCHHHHHHhhcc
Confidence 45555555421 233444444 44566555443 45999999999999999999999853 2333322 33
Q ss_pred C-Cchh--chhhhhc-----------CCcccce-eEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHH----HHHHHHH
Q 010250 332 K-PDLV--SFAKALS-----------SAYMPIG-AILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSC----AVAIEAL 392 (514)
Q Consensus 332 ~-pDiv--~~sK~l~-----------gG~~pig-~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~----aaa~aal 392 (514)
+ .|-. ..+|.+- .| ..+. +.-+++...+.-.. ...+-+..+.-|++- .--.-++
T Consensus 292 e~aDSfn~n~hK~~~vnfDCs~lWvkd~-~~~~~~~~vdp~yL~h~~~------~~~~Dyrhwqipl~rRfRSLKlWfv~ 364 (511)
T KOG0628|consen 292 EYADSFNFNPHKWLLVNFDCSPLWVKDG-TKLSRAFNVDPLYLKHAYQ------GSAPDYRHWQIPLGRRFRSLKLWFVL 364 (511)
T ss_pred hhhccccCChhheeEEeeeeecceeecC-ceeeeeeecChHhhcchhh------ccCCCccccccccccchhhHHHHHHH
Confidence 2 3433 2356432 12 1222 12223332222111 012222333334321 1112234
Q ss_pred HHHhhccHHHHHHHHH---HHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC-cE
Q 010250 393 KIYKERNIVEQVNKIA---PKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG-ML 468 (514)
Q Consensus 393 ~~~~~~~~~~~~~~~~---~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-v~ 468 (514)
+.+.-+++.+++++.. +.+.+.+.+-.+..++ ..+-.|+ +.|.+.+.. ...+.+..++...| |.
T Consensus 365 R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~-~~~~lgL-vcFRlk~~N----------~~ne~Ll~~in~~g~i~ 432 (511)
T KOG0628|consen 365 RSYGVENLQNYIREHVRLAKEFETLVRADPRFEIV-NKRILGL-VCFRLKGDN----------EINEALLNRLNSSGRIH 432 (511)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceee-cccccce-eEEeecCCc----------HHHHHHHHHHHhcCcEE
Confidence 4444456666655543 3333333221111121 1122232 234443321 13566777777766 33
Q ss_pred EEe---eCCE-EEEeCCCC-CCHHHHHHHHHHHHHHHHHHHHH
Q 010250 469 VRV---SGDN-IMMSPPFI-MSPEEVDELISKYGKALKATEER 506 (514)
Q Consensus 469 ~~~---~g~~-iRi~p~~~-~t~e~id~~~~~l~~~l~~~~~~ 506 (514)
..+ .|.. |||+.... .+++||++.-+.|.+....+.+.
T Consensus 433 l~~~~l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~~~ 475 (511)
T KOG0628|consen 433 LVPASLHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELFEA 475 (511)
T ss_pred EEEeeecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 443 2444 89886544 56789999999999988775543
No 387
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=96.72 E-value=0.4 Score=47.48 Aligned_cols=282 Identities=13% Similarity=0.125 Sum_probs=140.8
Q ss_pred chHHHHHHHHHHhc---CcC--CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc
Q 010250 144 KPSLDLAKELLEMF---TAS--KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP 218 (514)
Q Consensus 144 ~~~~ela~~L~~~~---~~~--~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~ 218 (514)
-...+|++.|.++. ++. +-..++|.++.++-..+|+-..--. ........+|+...+.|.-....+--+.. .
T Consensus 43 f~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~--~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s-~ 119 (363)
T PF04864_consen 43 FISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPN--ASPSSSPASVVAAAPYYSSYPEQTDFFDS-R 119 (363)
T ss_dssp TS-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHH--T-TTSSSEEEEE-SS--CHHHHHCCCT-B-T
T ss_pred eccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCC--CCCCCCCceeEecCCCccchHHHHHhccc-c
Confidence 34456666666655 321 2246788888888888877644211 11223456788888877544211110000 0
Q ss_pred cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250 219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 298 (514)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~ 298 (514)
.+ .|.++.. .|. ....+....=+++.|.|+.|....+
T Consensus 120 ~y------------------~w~Gda~-----~~~-----------~~~~~~~~IElVTSPNNPDG~lr~~--------- 156 (363)
T PF04864_consen 120 LY------------------KWAGDAS-----NFK-----------NSDNPSPYIELVTSPNNPDGQLREA--------- 156 (363)
T ss_dssp TE------------------EEEEECC-----CGT-----------T-S-CCGEEEEEESS-TTT---------------
T ss_pred Cc------------------cccccHH-----hhc-----------cCCCCCCeEEEEeCCCCCcccccch---------
Confidence 00 0111000 000 1112345666778887766543222
Q ss_pred HHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccceeEEeCH-HHHHHhhhccCCCCccccc
Q 010250 299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAILVSP-EVSEVIHSQSNTLGSFSHG 375 (514)
Q Consensus 299 ~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pig~v~~~~-~i~~~l~~~~~~~~~~~~~ 375 (514)
+++.-+..+|.|=+|----.| .+.. -.+-||. |+||.-|=++.++|..++++ ++.+.+. .+...
T Consensus 157 -V~~g~~~k~I~D~AYYWPhyT----pI~~-~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~-------~y~~l 223 (363)
T PF04864_consen 157 -VLNGSSGKVIHDLAYYWPHYT----PITA-PADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMT-------KYMEL 223 (363)
T ss_dssp -SSTTTEEEEEEE-TT-STTTS-------S--B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHH-------HHHHH
T ss_pred -hcCCCCcceeeeeeeeccccc----ccCC-CCCCceEEEEEecccCccccccceeeecCHHHHHHHH-------HHHHH
Confidence 235556678999887411111 1111 1234665 78895443338999988865 5666654 33455
Q ss_pred CCCCCcHHHHHHHHHHHHHHhh----c----cH----HHHHHHHHHHHHhhhhhc-----cCC-----CceeEEE-eeee
Q 010250 376 FTYSGHPVSCAVAIEALKIYKE----R----NI----VEQVNKIAPKFQDGVKAF-----SDS-----PIIGEIR-GTGL 432 (514)
Q Consensus 376 ~t~~~~pl~~aaa~aal~~~~~----~----~~----~~~~~~~~~~l~~~L~~l-----~~~-----~~~~~v~-g~g~ 432 (514)
+|.+.+-=++.-|+..|+.+.+ + ++ .+.++++-++|++.+..- .+. .+...++ ....
T Consensus 224 nTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPa 303 (363)
T PF04864_consen 224 NTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPA 303 (363)
T ss_dssp HCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---S
T ss_pred hcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCC
Confidence 6888777677777777765532 1 34 345666666677666542 111 1122233 3455
Q ss_pred eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee------CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250 433 ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS------GDNIMMSPPFIMSPEEVDELISKYGK 498 (514)
Q Consensus 433 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~------g~~iRi~p~~~~t~e~id~~~~~l~~ 498 (514)
+.++.+..+.. ..+...|++.||+.+.+ ...+|++ +..++++.|.++++|..
T Consensus 304 fAWlkCe~eed------------~DC~~~l~~~~I~tr~G~~fga~~ryVRlS--ml~~~d~Fd~l~~rL~~ 361 (363)
T PF04864_consen 304 FAWLKCEREED------------EDCYAVLREAKIITRSGVLFGADSRYVRLS--MLKRDDDFDQLLERLSK 361 (363)
T ss_dssp EEEEEESSCGG------------SSHHHHHHCTTEEEEEGGGGTS-TTEEEEE--SSS-HHHHHHHHHHHHC
T ss_pred eEEEecCCccc------------ccHHHHHHhCCcccCCCCccCCCCCeEEEe--ccCCHHHHHHHHHHHHh
Confidence 67777764321 11456778889988864 2569999 89999999999999874
No 388
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=96.70 E-value=0.071 Score=52.75 Aligned_cols=190 Identities=15% Similarity=0.111 Sum_probs=97.6
Q ss_pred HHHHHHHHHhcCCEEEEechhc-Ccccccc-cceecccCCCCchhc--hhhhhcCCcccceeEEeCHHHHHH--------
Q 010250 294 FEKVQAVVKKYDILFIADEVIC-AFGRLGT-MFGCDKYSIKPDLVS--FAKALSSAYMPIGAILVSPEVSEV-------- 361 (514)
Q Consensus 294 L~~l~~l~~~~gillI~DEv~t-G~gr~G~-~~~~~~~gv~pDiv~--~sK~l~gG~~pig~v~~~~~i~~~-------- 361 (514)
.+++|++|++.|++|.+|=+|- |+--.|. .-.+++ .|||| .-|+|-| -+-|.+..++.+...
T Consensus 206 YaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey----~DiVTTTTHKsLRG--PRg~mIFyRkGvk~~~~k~g~~i 279 (477)
T KOG2467|consen 206 YARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEY----CDIVTTTTHKSLRG--PRGAMIFYRKGVKSIKPKQGKEI 279 (477)
T ss_pred HHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccc----cceeeccccccccC--CcceeEEEeccCCcCCCCCCCcc
Confidence 6899999999999999998864 5422221 122333 47775 4589988 355555555533211
Q ss_pred ---hhhccC-CCCcccccCCCCCcHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeE
Q 010250 362 ---IHSQSN-TLGSFSHGFTYSGHPVSCAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLIL 434 (514)
Q Consensus 362 ---l~~~~~-~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~ 434 (514)
++..-+ .+=+...|+..+..-.++|. ||+..... ....++.++.+.|.+.|.+. .+.+++.-. ...++
T Consensus 280 ~ydlE~kINfaVFP~lQGGPHNhtIaalAv---ALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGT-DnHlv 354 (477)
T KOG2467|consen 280 LYDLEDKINFAVFPGLQGGPHNHTIAALAV---ALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTGGT-DNHLV 354 (477)
T ss_pred eechhhhhhhhccccccCCCCcchHHHHHH---HHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCc-cceEE
Confidence 110000 00011223333222223333 34444333 34677888888888888775 334433211 12234
Q ss_pred EEEEccCCCCCCCCCCccchHHHHHHHH---HHCCcEEEe----eCCEEEEeCCCCCC----HHHHHHHHHHHHHHHH
Q 010250 435 GTEFADNKSPNEPFPPEWGIGAYFGAQC---EKHGMLVRV----SGDNIMMSPPFIMS----PEEVDELISKYGKALK 501 (514)
Q Consensus 435 ~i~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~Gv~~~~----~g~~iRi~p~~~~t----~e~id~~~~~l~~~l~ 501 (514)
-+++.+.... ....+.+++.+ .++.-+... ..+.||+.-|...| ++|..+..+-|.++++
T Consensus 355 LvDLr~~G~d-------GarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 355 LVDLRPKGVD-------GARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred EEeccccCCc-------hHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 4455432211 11233333332 122211110 12469998886554 6888888888887765
No 389
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=95.73 E-value=0.66 Score=45.79 Aligned_cols=133 Identities=18% Similarity=0.283 Sum_probs=73.2
Q ss_pred ccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc----eecccC-CCCch-h--chhhhhcCCccccee
Q 010250 280 VIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF----GCDKYS-IKPDL-V--SFAKALSSAYMPIGA 351 (514)
Q Consensus 280 v~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~----~~~~~g-v~pDi-v--~~sK~l~gG~~pig~ 351 (514)
-.+.+| +-|..+-+++|+++.++.+.+-++|-++.|| -.|... +..++- ..-++ + +|+|.||-=+-++|+
T Consensus 207 aHNPTG-vDPt~eqw~ki~~~~~~k~~~pffDmAYQGf-aSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa 284 (427)
T KOG1411|consen 207 AHNPTG-VDPTKEQWEKISDLIKEKNLLPFFDMAYQGF-ASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGA 284 (427)
T ss_pred hcCCCC-CCccHHHHHHHHHHhhhccccchhhhhhccc-ccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhccce
Confidence 455556 6778899999999999999999999999999 555421 121210 01122 2 588977741145665
Q ss_pred E---EeCHHHHHHhhhccCCCCcccccCCCCCcHHHHH-HHHHHHH-------HHhh-ccHHHHHHHHHHHHHhhhhhc
Q 010250 352 I---LVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA-VAIEALK-------IYKE-RNIVEQVNKIAPKFQDGVKAF 418 (514)
Q Consensus 352 v---~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~a-aa~aal~-------~~~~-~~~~~~~~~~~~~l~~~L~~l 418 (514)
+ +-+++....+.++ .. ...-..|+.+|+--| .+...|. ...+ +.+.+++..+++.|.+.|...
T Consensus 285 ~svvc~~ad~A~rV~SQ---lk-~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~ 359 (427)
T KOG1411|consen 285 LSVVCKDADEAKRVESQ---LK-ILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKE 359 (427)
T ss_pred eEEEecCHHHHHHHHHH---HH-HHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcC
Confidence 3 4455555554432 11 112234444444222 2221121 1111 224566666677777777653
No 390
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=94.57 E-value=1 Score=43.85 Aligned_cols=195 Identities=17% Similarity=0.257 Sum_probs=109.4
Q ss_pred cCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc----cceeccc---CCCCchh--chhhhhcCCccccee
Q 010250 281 IGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT----MFGCDKY---SIKPDLV--SFAKALSSAYMPIGA 351 (514)
Q Consensus 281 ~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~----~~~~~~~---gv~pDiv--~~sK~l~gG~~pig~ 351 (514)
.+++| +-|.++-+..|.++.++.+.+..+|-++.|| -.|. .|+..++ |. +=++ +|+|.+|-=.-++|.
T Consensus 188 hNPTG-mDPT~EQW~qia~vik~k~lf~fFDiAYQGf-ASGD~~~DawAiR~fV~~g~-e~fv~QSFaKNfGlYneRvGn 264 (410)
T KOG1412|consen 188 HNPTG-MDPTREQWKQIADVIKSKNLFPFFDIAYQGF-ASGDLDADAWAIRYFVEQGF-ELFVCQSFAKNFGLYNERVGN 264 (410)
T ss_pred cCCCC-CCCCHHHHHHHHHHHHhcCceeeeehhhccc-ccCCccccHHHHHHHHhcCC-eEEEEhhhhhhcccccccccc
Confidence 56666 6778899999999999999999999999999 5554 3444332 21 1123 588966531145663
Q ss_pred ---EEeCHHHHHHhhhccCCCCcccccCCCCCcH-HHHHHHHHHHHHHh--h------ccHHHHHHHHHHHHHhhhhhcc
Q 010250 352 ---ILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP-VSCAVAIEALKIYK--E------RNIVEQVNKIAPKFQDGVKAFS 419 (514)
Q Consensus 352 ---v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~p-l~~aaa~aal~~~~--~------~~~~~~~~~~~~~l~~~L~~l~ 419 (514)
++-++.++..+.++- ....-.+++.+| .++....+.|+.-+ + +.+..++.+++..|++.|..|.
T Consensus 265 ltvv~~n~a~i~~v~SQl----~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~ 340 (410)
T KOG1412|consen 265 LTVVVNNPAVIAGVKSQL----TLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALK 340 (410)
T ss_pred eEEEecChhHHHHHHHHH----HHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 334566665555421 112234554433 23333444443111 1 1234677888888888888872
Q ss_pred CCCcee--EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHH
Q 010250 420 DSPIIG--EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVSGDNIMMSPPFIMSPEEVDELISKY 496 (514)
Q Consensus 420 ~~~~~~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l 496 (514)
-|.-. -+...|++-.--+. ..-.+.|.+ +-|+..+.| .|-|+ ..+...++....+|
T Consensus 341 -TPGtWDHI~~QiGMFSyTGLt----------------p~qV~~li~~h~vyLl~~G-RInis---GLN~~NveyVAkAI 399 (410)
T KOG1412|consen 341 -TPGTWDHITQQIGMFSYTGLT----------------PAQVDHLIENHKVYLLSDG-RINIS---GLNMKNVEYVAKAI 399 (410)
T ss_pred -CCCcHHHHHhhccceeecCCC----------------HHHHHHHHHhceEEEecCC-cEeee---ccccccHHHHHHHH
Confidence 12111 12223322111111 112345554 456655544 45555 56677888888888
Q ss_pred HHHHHHH
Q 010250 497 GKALKAT 503 (514)
Q Consensus 497 ~~~l~~~ 503 (514)
++++..+
T Consensus 400 de~Vr~~ 406 (410)
T KOG1412|consen 400 DETVRAI 406 (410)
T ss_pred HHHHHhh
Confidence 8887654
No 391
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=93.84 E-value=0.32 Score=43.09 Aligned_cols=59 Identities=10% Similarity=0.081 Sum_probs=44.9
Q ss_pred ccCCchHHHHHHHHHHhcC---cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcc
Q 010250 140 NRTTKPSLDLAKELLEMFT---ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHG 206 (514)
Q Consensus 140 ~~~~~~~~ela~~L~~~~~---~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG 206 (514)
.+..+....+++.+.+.++ ..+.++|++++++++|++.++++.. ...+.|++.++.|+|
T Consensus 92 ~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~--------dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 92 HGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIA--------DPGDAFLVPTPYYAA 153 (153)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHc--------CCCCEEEEeCCCCCC
Confidence 3455666777777777654 2356799999999999999998774 345789999999975
No 392
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=92.79 E-value=0.9 Score=43.14 Aligned_cols=55 Identities=18% Similarity=0.275 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcc-cCChhHHHHHHHHHHhcCCEEEEechh
Q 010250 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVI-PPPATYFEKVQAVVKKYDILFIADEVI 314 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~-~p~~~~L~~l~~l~~~~gillI~DEv~ 314 (514)
.+++.+++.+++.+++.+-+|.... .+. +-.|+-+++|..+|..|++.-|+..+|
T Consensus 141 tdleav~~~iee~g~dcilci~stt-----scfapr~pd~leaiaaica~~diphivnnay 196 (432)
T KOG3843|consen 141 TDLEAVEAIIEELGEDCILCIHSTT-----SCFAPRSPDNLEAIAAICAAHDIPHIVNNAY 196 (432)
T ss_pred HhHHHHHHHHHHhCCceEEEEeecc-----cccCCCCCchHHHHHHHHHccCchhhhcccc
Confidence 3467777888877776555544332 222 224567999999999999999999876
No 393
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=91.07 E-value=3.8 Score=39.86 Aligned_cols=98 Identities=15% Similarity=0.147 Sum_probs=58.9
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc--CCEEEEechhcCcccccccceecccCCCCc
Q 010250 257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY--DILFIADEVICAFGRLGTMFGCDKYSIKPD 334 (514)
Q Consensus 257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~--gillI~DEv~tG~gr~G~~~~~~~~gv~pD 334 (514)
.+.+...+. +++..|.+--.-|-+---..+-+.++++..+.++- ++++.+|..|..|-- ..+...+..|
T Consensus 155 ~~~v~~~i~----~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE-----~~EPt~vGaD 225 (416)
T COG4100 155 IQAVKTAIS----DRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVE-----EKEPTHVGAD 225 (416)
T ss_pred HHHHHHhcC----ccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhh-----ccCccccchh
Confidence 445555443 45666665444332211111224567777777764 688999998865521 2344456678
Q ss_pred hh--chhhhhcCCcccce-eEEeCHHHHHHhh
Q 010250 335 LV--SFAKALSSAYMPIG-AILVSPEVSEVIH 363 (514)
Q Consensus 335 iv--~~sK~l~gG~~pig-~v~~~~~i~~~l~ 363 (514)
++ ++-|.-|||..-.| ++.+++++++...
T Consensus 226 liAGSLIKNpGGgiaktGGYiaGk~~~ve~~~ 257 (416)
T COG4100 226 LIAGSLIKNPGGGIAKTGGYIAGKAELVEAAA 257 (416)
T ss_pred hhccceeeCCCCceeeccceeechHHHHHhhc
Confidence 87 46698888876655 5667788887654
No 394
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=85.61 E-value=49 Score=35.97 Aligned_cols=81 Identities=15% Similarity=0.210 Sum_probs=50.2
Q ss_pred cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeee--EEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCE
Q 010250 399 NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI--LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDN 475 (514)
Q Consensus 399 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~ 475 (514)
++..++....-.|..+|+.. .+.++.. ..+ +-+.+.. ..+.+..+..++++-.+-. .+.
T Consensus 395 ~IArrvh~~T~~l~~~l~~a-ghel~~k----~fFDTLkI~~~~-------------s~~~~l~rA~~~~iNlr~~ed~t 456 (1001)
T KOG2040|consen 395 EIARRVHNLTLILAEGLKNA-GHELQHK----PFFDTLKIRCGC-------------SAEEVLDRAAKRQINLRLVEDGT 456 (1001)
T ss_pred HHHHHHHHHHHHHHHHHhhc-chhhccc----cccceEEEEecC-------------cHHHHHHHHHhhcCceEEeecCc
Confidence 35566777777888888754 1222211 111 1222322 1345666777777777754 345
Q ss_pred EEEeCCCCCCHHHHHHHHHHHH
Q 010250 476 IMMSPPFIMSPEEVDELISKYG 497 (514)
Q Consensus 476 iRi~p~~~~t~e~id~~~~~l~ 497 (514)
|-++.--+.+++|+|.++.+|.
T Consensus 457 igvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 457 IGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred eEEeecccccHHHHHHHHHHHc
Confidence 7788667889999999999986
No 395
>PF07131 DUF1382: Protein of unknown function (DUF1382); InterPro: IPR009814 This entry is represented by Bacteriophage lambda, Xis. This entry overlaps with IPR009750, both representing lambda Xis. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical Escherichia coli and Bacteriophage lambda-like proteins of around 60 residues in length. The function of this family is unknown.
Probab=51.98 E-value=70 Score=23.05 Aligned_cols=33 Identities=21% Similarity=0.308 Sum_probs=26.7
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 010250 476 IMMSPPFIMSPEEVDELISKYGKALKATEERVK 508 (514)
Q Consensus 476 iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~~ 508 (514)
|||.|--..+++|...+-+.+.+-|+.+....+
T Consensus 24 IRFVpiPv~~dee~~~L~s~~~~kLe~ma~~aE 56 (61)
T PF07131_consen 24 IRFVPIPVVTDEEFHTLSSQLSQKLERMAAEAE 56 (61)
T ss_pred ceeeccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799998899999999988888887776654443
No 396
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=47.68 E-value=36 Score=30.79 Aligned_cols=52 Identities=13% Similarity=0.192 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccCCCCc-ccCC---hhHHHHHHHHHHhcCCEEEE
Q 010250 257 ANNLEDLILKEGPETIAAFIAEPVIGAGGV-IPPP---ATYFEKVQAVVKKYDILFIA 310 (514)
Q Consensus 257 ~~~le~li~~~~~~~~aavivEpv~~~~G~-~~p~---~~~L~~l~~l~~~~gillI~ 310 (514)
++.+++.+.+. .++..||+||.+.-.+. .-.. ..+++.+.++|+++|+.+|+
T Consensus 129 ~~~l~~~~~~~--~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~ 184 (193)
T PF13481_consen 129 LEELEAALKEL--YGPDLVVIDPLQSLHDGDENSNSAVAQLMQELKRLAKEYGVAVIL 184 (193)
T ss_dssp HHHHHHHHTT------SEEEEE-GGGG--S-TT-HHHHHHHHHHHHHHHHHH--EEEE
T ss_pred HHHHHHHHhhc--CCCcEEEEcCHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 34455555431 34779999998765432 1111 35889999999999987663
No 397
>COG0648 Nfo Endonuclease IV [DNA replication, recombination, and repair]
Probab=47.27 E-value=89 Score=30.60 Aligned_cols=61 Identities=16% Similarity=0.200 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC-CEEEEechhc
Q 010250 251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD-ILFIADEVIC 315 (514)
Q Consensus 251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~g-illI~DEv~t 315 (514)
+...+..+.|.+++.. . . ..++.|.+-|.|..+.-.=+-|++|.+++++.+ +-++.|-.|+
T Consensus 118 ~~l~~i~~~Ln~~~~~-~--~-v~i~~e~~agegs~~g~~F~~L~eii~~~~~~~~igvCiDtcH~ 179 (280)
T COG0648 118 EGLNRIAEALNELLEE-E--G-VIILLENTAGEGSGKGTQFGELAEIIDLIEEKERIGVCIDTCHA 179 (280)
T ss_pred HHHHHHHHHHHHHhhc-c--C-CeEEEEEeccccCccccchhhHHHHHHhhcccCceEEEEEchhh
Confidence 3444445666666653 1 2 456667776666556556677999999999998 9999998887
No 398
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=46.80 E-value=55 Score=29.77 Aligned_cols=52 Identities=17% Similarity=0.289 Sum_probs=30.3
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCC----CC-cccCChhHHHHHHHHHHhcCCEEE
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGA----GG-VIPPPATYFEKVQAVVKKYDILFI 309 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~----~G-~~~p~~~~L~~l~~l~~~~gillI 309 (514)
+.+++++..........|++.|.... .+ ....-+.|-+.++++|+++|+.++
T Consensus 94 ~nl~~ii~~~~~~~~~~il~tp~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 150 (198)
T cd01821 94 EYLRRYIAEARAKGATPILVTPVTRRTFDEGGKVEDTLGDYPAAMRELAAEEGVPLI 150 (198)
T ss_pred HHHHHHHHHHHHCCCeEEEECCccccccCCCCcccccchhHHHHHHHHHHHhCCCEE
Confidence 44444444322223456777765421 11 122334778899999999999885
No 399
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=41.52 E-value=89 Score=31.05 Aligned_cols=35 Identities=11% Similarity=0.318 Sum_probs=26.6
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEech
Q 010250 275 FIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV 313 (514)
Q Consensus 275 vivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv 313 (514)
|++....+.+ + +.+|+.+|.++|++.|+.+++|-.
T Consensus 133 VvlsGSlP~g--~--~~d~y~~li~~~~~~g~~vilD~S 167 (310)
T COG1105 133 VVLSGSLPPG--V--PPDAYAELIRILRQQGAKVILDTS 167 (310)
T ss_pred EEEeCCCCCC--C--CHHHHHHHHHHHHhcCCeEEEECC
Confidence 5555544332 2 458999999999999999999954
No 400
>smart00642 Aamy Alpha-amylase domain.
Probab=40.07 E-value=74 Score=28.42 Aligned_cols=47 Identities=17% Similarity=0.133 Sum_probs=33.5
Q ss_pred cEEEEEEccccCCCC-------c----------ccCChhHHHHHHHHHHhcCCEEEEechhcCc
Q 010250 271 TIAAFIAEPVIGAGG-------V----------IPPPATYFEKVQAVVKKYDILFIADEVICAF 317 (514)
Q Consensus 271 ~~aavivEpv~~~~G-------~----------~~p~~~~L~~l~~l~~~~gillI~DEv~tG~ 317 (514)
.+.+|.+.|++.... . ..-+.+-|+++.+-|+++|+.+|+|=|....
T Consensus 32 G~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~NH~ 95 (166)
T smart00642 32 GVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVVINHT 95 (166)
T ss_pred CCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 467888888854331 1 0112356999999999999999999997744
No 401
>KOG2433 consensus Uncharacterized conserved protein [Function unknown]
Probab=37.28 E-value=1.2e+02 Score=30.86 Aligned_cols=64 Identities=19% Similarity=0.225 Sum_probs=41.9
Q ss_pred CCHHHHHHHHHHHhcCCc--cccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHH
Q 010250 117 SEPRLVAAATAQLNTLPF--YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYN 186 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~--~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~ 186 (514)
.|-+|.+|+.+.-++-.. +++-|-+.++...-|- +++. . -.++++.+||+|-.+.+=.+|+.+.
T Consensus 434 tHrEiQqaLvdi~DKpA~FVGSrQWIGStEis~vLn----~ll~-~-~skil~v~sGaEva~~~rELA~HFq 499 (577)
T KOG2433|consen 434 THREIQQALVDIQDKPAKFVGSRQWIGSTEISFVLN----ELLK-L-ESKILAVNSGAEVAERVRELARHFQ 499 (577)
T ss_pred cHHHHHHHHHhccCcccceecccceecchhHHHHHH----HHhc-c-ceEEEEeccccHHHHHHHHHHHHhh
Confidence 467889998887666332 2444544554443333 3331 1 1489999999999999999998664
No 402
>PF13167 GTP-bdg_N: GTP-binding GTPase N-terminal
Probab=35.22 E-value=2.1e+02 Score=23.01 Aligned_cols=58 Identities=16% Similarity=0.246 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCC-EEEEechhc
Q 010250 257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDI-LFIADEVIC 315 (514)
Q Consensus 257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gi-llI~DEv~t 315 (514)
+++++.|....+-.-+.-++.---....... --++-+++|.++++++++ ++|+|.-.+
T Consensus 10 l~El~~L~~t~g~~vv~~~~q~~~~~~p~~~-iG~GK~eei~~~~~~~~~d~vvfd~~Ls 68 (95)
T PF13167_consen 10 LEELEELAETAGYEVVGTVVQKRRKPDPKTY-IGSGKVEEIKELIEELDADLVVFDNELS 68 (95)
T ss_pred HHHHHHHHHHCCCeEEEEEEecCCCCCccee-echhHHHHHHHHHhhcCCCEEEECCCCC
Confidence 5777777776653323333332222222223 345789999999999988 667776444
No 403
>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair]
Probab=34.80 E-value=1.8e+02 Score=26.64 Aligned_cols=18 Identities=39% Similarity=0.687 Sum_probs=14.7
Q ss_pred eCCCCEEEEccCCcccccCC
Q 010250 96 DVNGKKYLDSLAGLWCTALG 115 (514)
Q Consensus 96 d~dG~~ylD~~s~~~~~~lG 115 (514)
..+|.++||+.+|.|+ ||
T Consensus 41 ~i~g~~~LDlFAGSGa--LG 58 (187)
T COG0742 41 EIEGARVLDLFAGSGA--LG 58 (187)
T ss_pred ccCCCEEEEecCCccH--hH
Confidence 4789999999999764 55
No 404
>cd04920 ACT_AKiii-DAPDC_2 ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC). This CD includes the second of two ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC) bacterial protein. Aspartokinase (AK) is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. The lysA gene encodes the enzyme DAPDC, a pyridoxal-5'-phosphate (PLP)-dependent enzyme which catalyzes the final step in the lysine biosynthetic pathway converting meso-diaminopimelic acid (DAP) to l-lysine. Tandem ACT domains are positioned centrally with the AK catalytic domain N-terminal and the DAPDC domains C-terminal. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=31.04 E-value=1.4e+02 Score=21.65 Aligned_cols=45 Identities=11% Similarity=0.133 Sum_probs=33.6
Q ss_pred hHHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 454 IGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 454 ~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
....+...|.+.++.....+ ..++++ +.+.+++.++++.+|-+.+
T Consensus 16 v~~~~~~~L~~~~i~~i~~~~s~~~is--~vv~~~d~~~av~~LH~~f 61 (63)
T cd04920 16 KLGPALEVFGKKPVHLVSQAANDLNLT--FVVDEDQADGLCARLHFQL 61 (63)
T ss_pred HHHHHHHHHhcCCceEEEEeCCCCeEE--EEEeHHHHHHHHHHHHHHH
Confidence 45556677777888876544 347777 7789999999999987764
No 405
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=29.39 E-value=86 Score=28.91 Aligned_cols=35 Identities=17% Similarity=0.230 Sum_probs=27.9
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEE
Q 010250 270 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFI 309 (514)
Q Consensus 270 ~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI 309 (514)
-..++||+|=++- .|.... ++++.++++|||+.+|
T Consensus 155 l~Pa~VicEi~~~-dG~mar----~~~~~~fa~~h~l~~i 189 (203)
T COG0108 155 LKPAGVICEIMND-DGTMAR----LPELEEFAKEHGLPVI 189 (203)
T ss_pred CCCcEEEEEEeCC-CccccC----hHHHHHHHHHcCCcEE
Confidence 3568999997766 455555 7889999999999888
No 406
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=29.25 E-value=49 Score=30.98 Aligned_cols=95 Identities=18% Similarity=0.139 Sum_probs=47.6
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEec-hhcCcccccccceecccCCC-Cch
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADE-VICAFGRLGTMFGCDKYSIK-PDL 335 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DE-v~tG~gr~G~~~~~~~~gv~-pDi 335 (514)
+.+|+++. ..-.+..+-|-..+.. .. .+..++++++|++||+.||+++ +.-.. +.|--+ -|.|-. -++
T Consensus 25 ~~ve~al~---~Gv~~vQlR~K~~~~~-~~---~~~a~~~~~lc~~~~v~liINd~~dlA~-~~~AdG--VHlGq~D~~~ 94 (211)
T COG0352 25 EWVEAALK---GGVTAVQLREKDLSDE-EY---LALAEKLRALCQKYGVPLIINDRVDLAL-AVGADG--VHLGQDDMPL 94 (211)
T ss_pred HHHHHHHh---CCCeEEEEecCCCChH-HH---HHHHHHHHHHHHHhCCeEEecCcHHHHH-hCCCCE--EEcCCcccch
Confidence 55666665 2334444444432221 11 3456789999999999888764 32211 121111 122222 122
Q ss_pred hchhhhhcCCcccceeEEeCHHHHHHhh
Q 010250 336 VSFAKALSSAYMPIGAILVSPEVSEVIH 363 (514)
Q Consensus 336 v~~sK~l~gG~~pig~v~~~~~i~~~l~ 363 (514)
-...|-++.+ +.||.-+-+.+-.....
T Consensus 95 ~~ar~~~~~~-~iIG~S~h~~eea~~A~ 121 (211)
T COG0352 95 AEARELLGPG-LIIGLSTHDLEEALEAE 121 (211)
T ss_pred HHHHHhcCCC-CEEEeecCCHHHHHHHH
Confidence 2334555555 57777666655444443
No 407
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=28.98 E-value=4.7e+02 Score=24.21 Aligned_cols=34 Identities=6% Similarity=0.031 Sum_probs=26.9
Q ss_pred EEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEe
Q 010250 272 IAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIAD 311 (514)
Q Consensus 272 ~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~D 311 (514)
+.+|++|=.|- .+++-...+.+++++.|+.+|+=
T Consensus 83 ~~~v~IDEaQF------~~~~~v~~l~~lad~lgi~Vi~~ 116 (201)
T COG1435 83 VDCVLIDEAQF------FDEELVYVLNELADRLGIPVICY 116 (201)
T ss_pred cCEEEEehhHh------CCHHHHHHHHHHHhhcCCEEEEe
Confidence 67888887763 35577888999999999999963
No 408
>COG1349 GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]
Probab=28.24 E-value=5.4e+02 Score=24.66 Aligned_cols=50 Identities=22% Similarity=0.269 Sum_probs=36.1
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc-CCEEEEechhcCccccc
Q 010250 270 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY-DILFIADEVICAFGRLG 321 (514)
Q Consensus 270 ~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~-gillI~DEv~tG~gr~G 321 (514)
-+.+.+-+..+...+|...+......--+.+++.- -+.+++| ++=||+.+
T Consensus 165 ~d~aFig~~gi~~~~g~~~~~~~ea~~k~~~~~~a~~~~ll~D--~sKf~~~~ 215 (253)
T COG1349 165 FDKAFIGADGIDLEGGLTTFNEEEAEVKRAMIEAAREVILLAD--SSKFGRVA 215 (253)
T ss_pred ccEEEEeccccCCCCCcCcCCHHHHHHHHHHHHhhCcEEEEEc--CCccCCce
Confidence 46888889999988898888765555555666553 5688899 45476665
No 409
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=26.26 E-value=1.2e+02 Score=26.51 Aligned_cols=19 Identities=5% Similarity=0.294 Sum_probs=15.4
Q ss_pred hhHHHHHHHHHHhcCCEEE
Q 010250 291 ATYFEKVQAVVKKYDILFI 309 (514)
Q Consensus 291 ~~~L~~l~~l~~~~gillI 309 (514)
..+-+.++++|+++++.++
T Consensus 121 ~~~~~~~~~~a~~~~~~~~ 139 (177)
T cd01822 121 RRFAAIYPELAEEYGVPLV 139 (177)
T ss_pred HHHHHHHHHHHHHcCCcEe
Confidence 4667778899999998766
No 410
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=26.25 E-value=1.5e+02 Score=26.21 Aligned_cols=52 Identities=17% Similarity=0.245 Sum_probs=29.1
Q ss_pred HHHHHHHHHh--CCCcEEEEEEccccCCCCcc---------cCChhHHHHHHHHHHhcCCEEE
Q 010250 258 NNLEDLILKE--GPETIAAFIAEPVIGAGGVI---------PPPATYFEKVQAVVKKYDILFI 309 (514)
Q Consensus 258 ~~le~li~~~--~~~~~aavivEpv~~~~G~~---------~p~~~~L~~l~~l~~~~gillI 309 (514)
+.+++++... .......|++.|........ ..-..|-+.++++|+++++.+|
T Consensus 89 ~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~~~~~~~~~~~~~~~n~~l~~~a~~~~~~~i 151 (191)
T cd01834 89 TNLRRLIDRLKNKESAPRIVLVSPIAYEANEDPLPDGAEYNANLAAYADAVRELAAENGVAFV 151 (191)
T ss_pred HHHHHHHHHHHcccCCCcEEEECCcccCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 4455554443 23345567777764332211 1122455667889999998777
No 411
>PF12138 Spherulin4: Spherulation-specific family 4; InterPro: IPR021986 This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.
Probab=25.94 E-value=1.7e+02 Score=28.19 Aligned_cols=51 Identities=22% Similarity=0.285 Sum_probs=38.1
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCc--ccCChhHHHHHHHHHHhcCCEEE
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGAGGV--IPPPATYFEKVQAVVKKYDILFI 309 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~~G~--~~p~~~~L~~l~~l~~~~gillI 309 (514)
+.|.+.+.. .+...-.+|++|.+|.|.. -.|...|...|.+|-+.-|+.+|
T Consensus 19 ~~l~~a~~~-~p~~~f~vIiNP~sGPG~~~~~~pd~~Y~~~i~~L~~~~nv~vl 71 (253)
T PF12138_consen 19 DPLYDAIAA-HPSVPFTVIINPNSGPGSAPDPWPDANYAAAIPRLNSYANVRVL 71 (253)
T ss_pred HHHHHHHhc-CCCCcEEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcEE
Confidence 344444543 4555679999999999833 44888999999999877788777
No 412
>cd04915 ACT_AK-Ectoine_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinas
Probab=25.89 E-value=1.8e+02 Score=21.22 Aligned_cols=45 Identities=20% Similarity=0.188 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHCCcEEE--eeC-CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 454 IGAYFGAQCEKHGMLVR--VSG-DNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 454 ~~~~~~~~l~~~Gv~~~--~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
....+...|.+.|+-+. ..+ +.++++ +.+.+++.++++..|.+.+
T Consensus 17 v~~ki~~~L~~~~I~v~~i~~~~s~~~is--~~V~~~~~~~av~~Lh~~f 64 (66)
T cd04915 17 VLARGLAALAEAGIEPIAAHQSMRNVDVQ--FVVDRDDYDNAIKALHAAL 64 (66)
T ss_pred HHHHHHHHHHHCCCCEEEEEecCCeeEEE--EEEEHHHHHHHHHHHHHHH
Confidence 45567788889998873 333 347777 7789999999999988765
No 413
>cd04937 ACT_AKi-DapG-BS_2 ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI. This CD includes the C-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) strain 168), Clostridia, and Actinobacteria bacterial species. In B. subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive AK isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The BS AKI is tetrameric consisting of two alpha and two beta subunits; th
Probab=25.71 E-value=2.1e+02 Score=20.61 Aligned_cols=45 Identities=18% Similarity=0.282 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 454 IGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 454 ~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
....+...|.+.|+-+.... ..+.++ +.+.+++.++++.+|.+.+
T Consensus 17 i~~~if~aL~~~~I~v~~~~~Se~~is--~~v~~~~~~~av~~Lh~~f 62 (64)
T cd04937 17 VMAKIVGALSKEGIEILQTADSHTTIS--CLVSEDDVKEAVNALHEAF 62 (64)
T ss_pred HHHHHHHHHHHCCCCEEEEEcCccEEE--EEEcHHHHHHHHHHHHHHh
Confidence 46677788889998886444 446666 6789999999999888765
No 414
>TIGR00162 conserved hypothetical protein TIGR00162. This ortholog set includes MJ1210 from Methanococcus jannaschii and AF0525 from Archaeoglobus fulgidus, but not MJ0106 or AF1251.
Probab=25.36 E-value=4e+02 Score=24.36 Aligned_cols=16 Identities=25% Similarity=0.339 Sum_probs=14.1
Q ss_pred hHHHHHHHHHHhcCCE
Q 010250 292 TYFEKVQAVVKKYDIL 307 (514)
Q Consensus 292 ~~L~~l~~l~~~~gil 307 (514)
+|-+.|.++++++|+-
T Consensus 34 e~a~~vld~a~~~gv~ 49 (188)
T TIGR00162 34 ELVNAIIDVAKKYGAR 49 (188)
T ss_pred HHHHHHHHHHHHcCCC
Confidence 5789999999999993
No 415
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=23.68 E-value=92 Score=30.01 Aligned_cols=47 Identities=19% Similarity=0.340 Sum_probs=35.7
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEec
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADE 312 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DE 312 (514)
+.+++++. ++-++++-|-.|..-.+.. .+++|.+.|++.++.+++|.
T Consensus 93 ~~i~k~L~-----RlhavVIGPGLGRdp~~~k---~i~~iley~~~~dvP~VIDa 139 (306)
T KOG3974|consen 93 DIIEKLLQ-----RLHAVVIGPGLGRDPAILK---EIAKILEYLRGKDVPLVIDA 139 (306)
T ss_pred hHHHHHHh-----heeEEEECCCCCCCHHHHH---HHHHHHHHHhcCCCcEEEcC
Confidence 55666664 6778999998887544433 47889999999999999994
No 416
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=22.51 E-value=3e+02 Score=27.37 Aligned_cols=43 Identities=14% Similarity=0.148 Sum_probs=25.9
Q ss_pred hHHH-HHHHHHHhc-CCEEEEechhcCcccccccceecccCCCCc
Q 010250 292 TYFE-KVQAVVKKY-DILFIADEVICAFGRLGTMFGCDKYSIKPD 334 (514)
Q Consensus 292 ~~L~-~l~~l~~~~-gillI~DEv~tG~gr~G~~~~~~~~gv~pD 334 (514)
+.++ .|+.+.+++ ++++|.|=..+.+.-.|..+-...-+|.-|
T Consensus 94 g~v~~air~iK~~~p~l~vi~DVclc~YT~hGHcGil~~~~idND 138 (320)
T cd04823 94 NLVCRAIRAIKEAFPELGIITDVALDPYTSHGHDGIVRDGGILND 138 (320)
T ss_pred ChHHHHHHHHHHhCCCcEEEEeeeccCCCCCCcceeccCCcCcCH
Confidence 4444 466666665 788999988777655555444433334444
No 417
>PF02677 DUF208: Uncharacterized BCR, COG1636; InterPro: IPR003828 This entry describes proteins of unknown function.
Probab=22.30 E-value=2e+02 Score=26.10 Aligned_cols=37 Identities=19% Similarity=0.386 Sum_probs=31.0
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHH---HHHHHHhcCCEEEEec
Q 010250 270 ETIAAFIAEPVIGAGGVIPPPATYFEK---VQAVVKKYDILFIADE 312 (514)
Q Consensus 270 ~~~aavivEpv~~~~G~~~p~~~~L~~---l~~l~~~~gillI~DE 312 (514)
-++.++..+|. |.|..+|.++ +.++|++.|+-+|.++
T Consensus 23 ~~vt~~fyNPN------IhP~~Ey~~R~~~~~~~~~~~~i~~i~~~ 62 (176)
T PF02677_consen 23 FDVTGYFYNPN------IHPYEEYERRLEELKRFAEKLGIPLIEGD 62 (176)
T ss_pred CCeEEEEeCCC------CCcHHHHHHHHHHHHHHHHHcCCCEEecC
Confidence 47888888886 8888888765 6778999999999988
No 418
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=22.01 E-value=1.6e+02 Score=27.70 Aligned_cols=40 Identities=10% Similarity=0.084 Sum_probs=27.3
Q ss_pred cEEEEEEccccCCC-CcccCC-----hhHHHHHHHHHHhcCCEEEE
Q 010250 271 TIAAFIAEPVIGAG-GVIPPP-----ATYFEKVQAVVKKYDILFIA 310 (514)
Q Consensus 271 ~~aavivEpv~~~~-G~~~p~-----~~~L~~l~~l~~~~gillI~ 310 (514)
.+..|++++++... +..... ..+++.|+++|+++|+.+|+
T Consensus 123 ~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 123 GLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 56789999987532 110011 14578899999999997774
No 419
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=21.65 E-value=1.6e+02 Score=24.62 Aligned_cols=43 Identities=14% Similarity=0.135 Sum_probs=27.8
Q ss_pred HHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEE
Q 010250 260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFI 309 (514)
Q Consensus 260 le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI 309 (514)
+.+++.+.....++++++.....-. -.| +++.++|++++.+||
T Consensus 61 ~~~~i~~L~~~~~agL~i~~~~~~~--~iP-----~~~i~~A~~~~lPli 103 (123)
T PF07905_consen 61 LREFIRELAEKGAAGLGIKTGRYLD--EIP-----EEIIELADELGLPLI 103 (123)
T ss_pred HHHHHHHHHHCCCeEEEEeccCccc--cCC-----HHHHHHHHHcCCCEE
Confidence 4444444333568888886642221 222 789999999999888
No 420
>TIGR03772 anch_rpt_subst anchored repeat ABC transporter, substrate-binding protein. Members of this protein family are ABC transporter permease subunits as identified by pfam00950, but additionally contain the Actinobacterial insert domain described by TIGR03769. Some homologs (lacking the insert) have been described as transporters of manganese or of chelated iron. Members of this family typically are found along with an ATP-binding cassette protein, a permease, and an LPXTG-anchored protein with two or three copies of the TIGR03769 insert that occurs just once in this protein family.
Probab=21.26 E-value=3.8e+02 Score=28.53 Aligned_cols=43 Identities=12% Similarity=0.142 Sum_probs=28.6
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEE
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFI 309 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI 309 (514)
.+|.++++.....++.+|++||..+.. .+.+..++++.|+.++
T Consensus 407 ~~L~~Li~~IK~~~V~~IF~Epq~~~~---------~~~l~~IA~e~Gv~V~ 449 (479)
T TIGR03772 407 ADRRRLTRTIENLKVPAVFLEPNLAAR---------STTLNEIADELGVRVC 449 (479)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCCc---------hHHHHHHHHHcCCcEE
Confidence 344444443334678999999986531 3557888999998653
No 421
>smart00545 JmjN Small domain found in the jumonji family of transcription factors. To date, this domain always co-occurs with the JmjC domain (although the reverse is not true).
Probab=21.24 E-value=1.1e+02 Score=20.52 Aligned_cols=21 Identities=29% Similarity=0.594 Sum_probs=16.9
Q ss_pred ChhHHHHHHHHHHhcCCEEEE
Q 010250 290 PATYFEKVQAVVKKYDILFIA 310 (514)
Q Consensus 290 ~~~~L~~l~~l~~~~gillI~ 310 (514)
+-+|++.|..++++||+.=|+
T Consensus 15 p~~yi~~i~~~~~~yGi~KIv 35 (42)
T smart00545 15 PLAYISKIRPQAEKYGICKVV 35 (42)
T ss_pred HHHHHHHHHHHHhhCCEEEEE
Confidence 457899999999999987654
No 422
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=21.23 E-value=1.1e+02 Score=33.75 Aligned_cols=33 Identities=21% Similarity=0.146 Sum_probs=28.8
Q ss_pred ChhHHHHHHHHHHhcCCEEEEechhcCcccccc
Q 010250 290 PATYFEKVQAVVKKYDILFIADEVICAFGRLGT 322 (514)
Q Consensus 290 ~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~ 322 (514)
+++-|+++++-|++.||-||+|=|+.-|+..|.
T Consensus 212 tPedfk~fVD~aH~~GIgViLD~V~~HF~~d~~ 244 (628)
T COG0296 212 TPEDFKALVDAAHQAGIGVILDWVPNHFPPDGN 244 (628)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEecCCcCCCCcc
Confidence 357799999999999999999999998877653
No 423
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=20.95 E-value=2.2e+02 Score=24.47 Aligned_cols=47 Identities=21% Similarity=0.403 Sum_probs=29.9
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc-CCEEE
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY-DILFI 309 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~-gillI 309 (514)
++|++++....+ +...+++.|... .....++-+.+.++|++| ++.++
T Consensus 67 ~nl~~ii~~~~~-~~~ivlv~~~~~----~~~~~~~n~~~~~~a~~~~~v~~i 114 (150)
T cd01840 67 DQLDELLDALGP-DRQVYLVNPHVP----RPWEPDVNAYLLDAAKKYKNVTII 114 (150)
T ss_pred HHHHHHHHHcCC-CCEEEEEECCCC----cchHHHHHHHHHHHHHHCCCcEEe
Confidence 677777776653 355666666421 122346667789999999 65554
No 424
>KOG0352 consensus ATP-dependent DNA helicase [Replication, recombination and repair]
Probab=20.93 E-value=2.4e+02 Score=29.40 Aligned_cols=57 Identities=18% Similarity=0.401 Sum_probs=35.8
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCC-EEEEechhcCcccccccceecccCCCCchhchhh
Q 010250 270 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDI-LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAK 340 (514)
Q Consensus 270 ~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gi-llI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK 340 (514)
.++..+.+.|-+..+ +.|-+-|..|..++-. ++++||+|+ .-. |+ .+..||.+.+|-
T Consensus 112 p~~K~LYITPE~AAt------~~FQ~lLn~L~~r~~L~Y~vVDEAHC-VSQ----WG---HDFRPDYL~LG~ 169 (641)
T KOG0352|consen 112 PTIKMLYITPEGAAT------DGFQKLLNGLANRDVLRYIVVDEAHC-VSQ----WG---HDFRPDYLTLGS 169 (641)
T ss_pred CceeEEEEchhhhhh------hhHHHHHHHHhhhceeeeEEechhhh-Hhh----hc---cccCcchhhhhh
Confidence 478888898876543 2333444555555433 688999998 211 11 245799998874
No 425
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=20.74 E-value=5.4e+02 Score=24.71 Aligned_cols=30 Identities=7% Similarity=0.285 Sum_probs=19.9
Q ss_pred CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEE
Q 010250 269 PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFI 309 (514)
Q Consensus 269 ~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI 309 (514)
..++.+|++||..+. +.+..++++.|+-++
T Consensus 215 ~~~v~~if~e~~~~~-----------~~~~~la~~~g~~v~ 244 (266)
T cd01018 215 EKGVRVVFVQPQFST-----------KSAEAIAREIGAKVV 244 (266)
T ss_pred HcCCCEEEEcCCCCc-----------HHHHHHHHHcCCeEE
Confidence 356788888885432 335577888887654
No 426
>PRK05409 hypothetical protein; Provisional
Probab=20.65 E-value=1.1e+02 Score=30.04 Aligned_cols=32 Identities=16% Similarity=0.473 Sum_probs=28.3
Q ss_pred CCCCcccCChhHHHHHHHHHHhcCCEEEEech
Q 010250 282 GAGGVIPPPATYFEKVQAVVKKYDILFIADEV 313 (514)
Q Consensus 282 ~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv 313 (514)
+-||.-.++++||++|++++++++..+++|..
T Consensus 66 slGs~~~ld~~~L~~l~~l~~~~~~~~vSeHL 97 (281)
T PRK05409 66 SLGGAAPLDKDHLKRLKALADRYQPPLVSEHL 97 (281)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHCCCEEEeee
Confidence 45666788889999999999999999999975
No 427
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=20.54 E-value=2.6e+02 Score=27.24 Aligned_cols=125 Identities=9% Similarity=0.167 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHH-HHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCC
Q 010250 146 SLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV-WYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF 224 (514)
Q Consensus 146 ~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a-~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~ 224 (514)
...+++.|++.+....+++.-++..-.++...-+... ..+.......++..++++.++| ++......+.-........
T Consensus 122 ~~~~a~~Ia~~L~~~dP~~~~~y~~N~~~~~~~L~~l~~~~~~~~~~~~~~~~v~~H~af-~Y~~~~~gl~~~~~~~~~~ 200 (282)
T cd01017 122 AIQQVENIKDALIKLDPDNKEYYEKNAAAYAKKLEALDQEYRAKLAKAKGKTFVTQHAAF-GYLARRYGLKQIAIVGVSP 200 (282)
T ss_pred HHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEecccH-HHHHHHCCCeEEecccCCC
Q ss_pred CCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 010250 225 DLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY 304 (514)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~ 304 (514)
+.... ..+|.+++.....+++.+|++||-.+. +.+..++++.
T Consensus 201 ~~eps---------------------------~~~l~~l~~~ik~~~v~~if~e~~~~~-----------~~~~~la~~~ 242 (282)
T cd01017 201 EVEPS---------------------------PKQLAELVEFVKKSDVKYIFFEENASS-----------KIAETLAKET 242 (282)
T ss_pred CCCCC---------------------------HHHHHHHHHHHHHcCCCEEEEeCCCCh-----------HHHHHHHHHc
Q ss_pred CCEEE
Q 010250 305 DILFI 309 (514)
Q Consensus 305 gillI 309 (514)
|+.++
T Consensus 243 g~~v~ 247 (282)
T cd01017 243 GAKLL 247 (282)
T ss_pred CCcEE
No 428
>cd07571 ALP_N-acyl_transferase Apolipoprotein N-acyl transferase (class 9 nitrilases). ALP N-acyl transferase (Lnt), is an essential membrane-bound enzyme in gram-negative bacteria, which catalyzes the N-acylation of apolipoproteins, the final step in lipoprotein maturation. This is a reverse amidase (i.e. condensation) reaction. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 9.
Probab=20.34 E-value=2.9e+02 Score=26.59 Aligned_cols=37 Identities=3% Similarity=0.038 Sum_probs=26.6
Q ss_pred EEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEE
Q 010250 274 AFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA 310 (514)
Q Consensus 274 avivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~ 310 (514)
-+++=|-....|....+..+++++.++|+++++.+|+
T Consensus 41 ~lvvfPE~~l~g~~~~~~~~~~~l~~~ak~~~i~ii~ 77 (270)
T cd07571 41 DLVVWPETALPFDLQRDPDALARLARAARAVGAPLLT 77 (270)
T ss_pred CEEEecCCcCCcccccCHHHHHHHHHHHHhcCCeEEE
Confidence 3555565555554444567899999999999998874
No 429
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=20.31 E-value=2.5e+02 Score=27.86 Aligned_cols=57 Identities=12% Similarity=0.152 Sum_probs=31.3
Q ss_pred CcEEEEEEccccCC---CCccc-CChhHHHH-HHHHHHhc-CCEEEEechhcCccccccccee
Q 010250 270 ETIAAFIAEPVIGA---GGVIP-PPATYFEK-VQAVVKKY-DILFIADEVICAFGRLGTMFGC 326 (514)
Q Consensus 270 ~~~aavivEpv~~~---~G~~~-p~~~~L~~-l~~l~~~~-gillI~DEv~tG~gr~G~~~~~ 326 (514)
..+.+|++=|+... .|.-. .+.+.+++ |+.+.+++ ++++|.|=..+.+.-.|..+..
T Consensus 73 ~Gi~~v~lFgv~~~Kd~~gs~A~~~~g~v~~air~iK~~~pdl~vi~DVcLc~YT~hGHcGil 135 (322)
T PRK13384 73 LGIRYVMPFGISHHKDAKGSDTWDDNGLLARMVRTIKAAVPEMMVIPDICFCEYTDHGHCGVL 135 (322)
T ss_pred cCCCEEEEeCCCCCCCCCcccccCCCChHHHHHHHHHHHCCCeEEEeeeecccCCCCCceeec
Confidence 34556665554321 12222 23344444 66666664 8899999887766555554444
No 430
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=20.12 E-value=2.6e+02 Score=22.48 Aligned_cols=54 Identities=13% Similarity=0.044 Sum_probs=28.3
Q ss_pred HHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCcc-EEEEEecCCcccc
Q 010250 147 LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK-KFIARQKSYHGST 208 (514)
Q Consensus 147 ~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~-~ii~~~~~yHG~t 208 (514)
.++.+.+.++....+..-+++|.+|..+..++..+.. .+-+ .+..+++++.++.
T Consensus 52 ~~l~~~~~~l~~~~~~~ivv~C~~G~rs~~a~~~L~~--------~G~~~~v~~l~gG~~~W~ 106 (109)
T cd01533 52 AELVLRVGELAPDPRTPIVVNCAGRTRSIIGAQSLIN--------AGLPNPVAALRNGTQGWT 106 (109)
T ss_pred HHHHHHHHhcCCCCCCeEEEECCCCchHHHHHHHHHH--------CCCCcceeEecCCHHHHH
Confidence 3444444444222223346777788877554443322 1222 3677788886653
No 431
>cd01393 recA_like RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein, eukaryotes have multiple RecA homologs such as Rad51, DMC1 and Rad55/57. Archaea have the RecA-like homologs radA and radB.
Probab=20.08 E-value=2.9e+02 Score=25.48 Aligned_cols=44 Identities=9% Similarity=0.178 Sum_probs=27.9
Q ss_pred CcEEEEEEccccCCCCcc-cCC----------hhHHHHHHHHHHhcCCEEE-Eech
Q 010250 270 ETIAAFIAEPVIGAGGVI-PPP----------ATYFEKVQAVVKKYDILFI-ADEV 313 (514)
Q Consensus 270 ~~~aavivEpv~~~~G~~-~p~----------~~~L~~l~~l~~~~gillI-~DEv 313 (514)
..+..|++|++..--... ... ..++..|..+|+++++.+| ..++
T Consensus 113 ~~~~lvVIDsis~l~~~~~~~~~~~~~~~~~l~~~~~~L~~~a~~~~~~vi~tnq~ 168 (226)
T cd01393 113 GRVDLVVVDSVAALFRKEFIGRGMLAERARLLSQALRKLLRLADKFNVAVVFTNQV 168 (226)
T ss_pred CCeeEEEEcCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEEE
Confidence 468899999986521100 101 1345678999999999766 3443
Done!