Query 010250
Match_columns 514
No_of_seqs 347 out of 2250
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 23:09:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010250.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010250hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e3q_A Pyruvate transaminase; 100.0 1.6E-88 5.4E-93 710.6 42.1 438 68-507 35-472 (473)
2 4atq_A 4-aminobutyrate transam 100.0 2.2E-79 7.6E-84 639.1 41.4 417 54-502 28-454 (456)
3 3i5t_A Aminotransferase; pyrid 100.0 1.2E-71 4.1E-76 588.6 43.6 438 66-507 20-458 (476)
4 3hmu_A Aminotransferase, class 100.0 6E-72 2E-76 590.1 39.3 435 67-509 22-458 (472)
5 4ao9_A Beta-phenylalanine amin 100.0 6.9E-72 2.4E-76 580.1 35.9 409 44-503 35-446 (454)
6 4a6r_A Omega transaminase; tra 100.0 3.4E-68 1.2E-72 560.4 42.9 438 65-508 15-454 (459)
7 3gju_A Putative aminotransfera 100.0 2.1E-68 7.3E-73 562.1 40.6 439 66-505 15-458 (460)
8 4a0g_A Adenosylmethionine-8-am 100.0 9.9E-70 3.4E-74 603.4 24.6 435 64-503 338-828 (831)
9 3dod_A Adenosylmethionine-8-am 100.0 3E-65 1E-69 536.3 41.7 432 67-504 12-444 (448)
10 3tfu_A Adenosylmethionine-8-am 100.0 3.2E-65 1.1E-69 536.8 37.9 410 67-504 40-454 (457)
11 3oks_A 4-aminobutyrate transam 100.0 4.9E-63 1.7E-67 519.7 39.2 401 82-501 43-449 (451)
12 4ffc_A 4-aminobutyrate aminotr 100.0 5.9E-63 2E-67 519.4 39.6 400 82-504 46-450 (453)
13 3n5m_A Adenosylmethionine-8-am 100.0 1.1E-62 3.9E-67 517.2 37.9 412 82-502 31-451 (452)
14 3i4j_A Aminotransferase, class 100.0 8.4E-59 2.9E-63 484.5 43.2 412 68-503 4-428 (430)
15 1z7d_A Ornithine aminotransfer 100.0 3.3E-58 1.1E-62 480.5 39.7 382 82-506 47-432 (433)
16 3a8u_X Omega-amino acid--pyruv 100.0 4.2E-58 1.4E-62 482.0 39.3 429 66-503 17-447 (449)
17 2oat_A Ornithine aminotransfer 100.0 1E-56 3.5E-61 470.0 41.0 378 82-502 58-438 (439)
18 3l44_A Glutamate-1-semialdehyd 100.0 4.5E-56 1.5E-60 464.5 37.5 393 81-505 36-432 (434)
19 4e77_A Glutamate-1-semialdehyd 100.0 8.8E-56 3E-60 461.6 36.0 411 58-502 12-428 (429)
20 3nx3_A Acoat, acetylornithine 100.0 2.6E-55 9E-60 452.8 38.1 374 82-502 18-394 (395)
21 2yky_A Beta-transaminase; tran 100.0 3.5E-60 1.2E-64 495.6 0.0 412 43-504 47-461 (465)
22 1ohv_A 4-aminobutyrate aminotr 100.0 1.9E-56 6.7E-61 471.8 28.1 393 82-502 45-470 (472)
23 3dxv_A Alpha-amino-epsilon-cap 100.0 3.6E-55 1.2E-59 458.3 36.7 395 82-504 25-426 (439)
24 3k28_A Glutamate-1-semialdehyd 100.0 1.9E-55 6.5E-60 459.2 33.0 412 58-503 12-427 (429)
25 1zod_A DGD, 2,2-dialkylglycine 100.0 2E-54 6.7E-59 451.8 38.8 402 82-503 25-432 (433)
26 3fq8_A Glutamate-1-semialdehyd 100.0 1.1E-54 3.9E-59 452.9 35.0 391 81-502 33-426 (427)
27 2pb2_A Acetylornithine/succiny 100.0 1.8E-54 6.1E-59 450.6 35.4 378 82-503 39-418 (420)
28 2cjg_A L-lysine-epsilon aminot 100.0 1.7E-54 5.9E-59 454.5 35.5 393 84-503 37-448 (449)
29 1s0a_A Adenosylmethionine-8-am 100.0 3.4E-52 1.2E-56 434.5 41.6 408 68-502 13-423 (429)
30 2epj_A Glutamate-1-semialdehyd 100.0 1.6E-52 5.6E-57 437.6 36.1 405 58-503 17-431 (434)
31 2e7u_A Glutamate-1-semialdehyd 100.0 1.6E-51 5.4E-56 428.8 34.2 386 82-500 34-424 (424)
32 2eo5_A 419AA long hypothetical 100.0 1E-50 3.4E-55 422.2 39.1 386 82-503 24-418 (419)
33 3ruy_A Ornithine aminotransfer 100.0 3.6E-50 1.2E-54 413.8 38.3 371 82-500 18-391 (392)
34 4adb_A Succinylornithine trans 100.0 9.7E-50 3.3E-54 412.3 36.8 379 82-504 21-401 (406)
35 2cy8_A D-phgat, D-phenylglycin 100.0 1.9E-50 6.6E-55 424.3 32.0 384 82-505 39-437 (453)
36 1sff_A 4-aminobutyrate aminotr 100.0 8.7E-48 3E-52 400.3 37.1 396 82-503 23-424 (426)
37 2ord_A Acoat, acetylornithine 100.0 2.5E-46 8.6E-51 385.9 33.9 374 81-502 21-396 (397)
38 1vef_A Acetylornithine/acetyl- 100.0 6E-44 2.1E-48 367.8 34.6 366 82-500 27-394 (395)
39 2eh6_A Acoat, acetylornithine 100.0 3.3E-42 1.1E-46 352.0 36.7 364 82-499 10-374 (375)
40 2w8t_A SPT, serine palmitoyltr 100.0 7.4E-36 2.5E-40 310.9 27.2 348 84-504 48-416 (427)
41 3l8a_A METC, putative aminotra 100.0 5.9E-36 2E-40 311.0 24.3 359 82-501 41-420 (421)
42 3tqx_A 2-amino-3-ketobutyrate 100.0 3.9E-33 1.3E-37 286.8 29.6 349 82-503 26-396 (399)
43 3kki_A CAI-1 autoinducer synth 100.0 1.5E-34 5E-39 299.2 18.9 339 87-502 46-403 (409)
44 1fc4_A 2-amino-3-ketobutyrate 100.0 1.3E-33 4.3E-38 291.1 24.9 350 82-503 27-397 (401)
45 3dzz_A Putative pyridoxal 5'-p 100.0 9.8E-32 3.4E-36 275.6 24.4 356 84-503 11-389 (391)
46 3a2b_A Serine palmitoyltransfe 100.0 4.2E-31 1.4E-35 272.0 28.9 348 82-503 26-392 (398)
47 1bs0_A Protein (8-amino-7-oxon 100.0 4.1E-31 1.4E-35 270.7 28.0 343 82-499 22-383 (384)
48 3fdb_A Beta C-S lyase, putativ 100.0 6E-32 2.1E-36 275.9 21.0 350 84-502 7-375 (377)
49 3kax_A Aminotransferase, class 100.0 2.5E-30 8.5E-35 264.4 26.2 352 83-500 6-382 (383)
50 1d2f_A MALY protein; aminotran 100.0 4.5E-29 1.5E-33 256.2 30.0 353 84-503 7-389 (390)
51 4dq6_A Putative pyridoxal phos 100.0 3.1E-30 1.1E-34 264.4 20.5 352 84-500 11-390 (391)
52 1c7n_A Cystalysin; transferase 100.0 1.6E-29 5.5E-34 260.2 21.0 351 85-505 9-395 (399)
53 1yiz_A Kynurenine aminotransfe 100.0 4.7E-28 1.6E-32 251.8 27.4 358 100-501 37-427 (429)
54 2zc0_A Alanine glyoxylate tran 100.0 9.8E-28 3.4E-32 247.5 27.5 345 98-503 32-404 (407)
55 3ftb_A Histidinol-phosphate am 100.0 9.6E-28 3.3E-32 243.3 26.5 338 83-501 8-359 (361)
56 3nra_A Aspartate aminotransfer 100.0 3.6E-29 1.2E-33 258.0 16.2 363 84-503 20-405 (407)
57 2dou_A Probable N-succinyldiam 100.0 8.5E-28 2.9E-32 245.4 24.4 334 97-500 22-375 (376)
58 2z61_A Probable aspartate amin 100.0 6.7E-28 2.3E-32 245.6 23.4 323 98-501 27-369 (370)
59 1j32_A Aspartate aminotransfer 100.0 1.3E-27 4.6E-32 244.9 25.6 342 98-503 28-387 (388)
60 2bwn_A 5-aminolevulinate synth 100.0 4.7E-27 1.6E-31 242.0 29.1 334 98-502 44-399 (401)
61 3jtx_A Aminotransferase; NP_28 100.0 2E-28 6.8E-33 251.6 17.8 352 82-500 12-395 (396)
62 3b1d_A Betac-S lyase; HET: PLP 99.9 8.7E-31 3E-35 269.3 0.0 357 83-501 12-391 (392)
63 3h14_A Aminotransferase, class 100.0 2.1E-27 7E-32 243.8 24.6 340 97-504 28-383 (391)
64 2zyj_A Alpha-aminodipate amino 100.0 4.8E-28 1.6E-32 249.2 19.3 343 99-505 31-395 (397)
65 3euc_A Histidinol-phosphate am 100.0 4.7E-27 1.6E-31 239.0 26.1 327 99-500 29-365 (367)
66 1vp4_A Aminotransferase, putat 100.0 2.3E-27 7.9E-32 246.5 24.2 350 99-506 42-421 (425)
67 1lc5_A COBD, L-threonine-O-3-p 100.0 2.4E-27 8.1E-32 241.1 23.1 328 95-503 19-360 (364)
68 3ffh_A Histidinol-phosphate am 100.0 8E-27 2.7E-31 236.9 26.7 322 99-499 31-362 (363)
69 2x5d_A Probable aminotransfera 100.0 1.9E-27 6.6E-32 245.9 22.2 342 97-503 34-398 (412)
70 3b46_A Aminotransferase BNA3; 100.0 4.5E-27 1.5E-31 246.0 24.8 358 98-498 55-442 (447)
71 1gd9_A Aspartate aminotransfer 100.0 7.6E-27 2.6E-31 239.3 26.0 339 100-502 26-385 (389)
72 3dyd_A Tyrosine aminotransfera 100.0 1.3E-26 4.3E-31 241.2 28.0 349 94-503 48-424 (427)
73 3ly1_A Putative histidinol-pho 100.0 7.3E-27 2.5E-31 236.2 25.2 337 89-502 5-351 (354)
74 2gb3_A Aspartate aminotransfer 100.0 6.8E-27 2.3E-31 241.6 24.6 334 97-504 40-403 (409)
75 1v2d_A Glutamine aminotransfer 100.0 7.8E-27 2.7E-31 238.7 24.7 328 102-505 27-373 (381)
76 1o4s_A Aspartate aminotransfer 100.0 1.1E-26 3.6E-31 238.6 25.2 332 98-501 39-387 (389)
77 3ezs_A Aminotransferase ASPB; 100.0 2.3E-27 7.7E-32 242.0 19.6 333 97-502 21-374 (376)
78 1xi9_A Putative transaminase; 100.0 8.4E-27 2.9E-31 240.7 23.7 345 97-503 35-403 (406)
79 2o1b_A Aminotransferase, class 99.9 6.3E-27 2.2E-31 241.6 21.1 336 98-502 45-402 (404)
80 3aow_A Putative uncharacterize 99.9 2.5E-26 8.4E-31 240.5 25.8 345 99-503 75-445 (448)
81 3piu_A 1-aminocyclopropane-1-c 99.9 4.7E-27 1.6E-31 244.9 20.1 353 95-504 31-433 (435)
82 3cq5_A Histidinol-phosphate am 99.9 8.3E-26 2.8E-30 230.2 28.4 324 103-501 33-366 (369)
83 1u08_A Hypothetical aminotrans 99.9 6.4E-26 2.2E-30 232.3 27.0 335 101-498 31-385 (386)
84 1kmj_A Selenocysteine lyase; p 99.9 7E-26 2.4E-30 232.8 27.2 343 98-503 20-405 (406)
85 3ele_A Amino transferase; RER0 99.9 3.2E-26 1.1E-30 235.4 24.5 337 98-503 33-396 (398)
86 2o0r_A RV0858C (N-succinyldiam 99.9 2.6E-26 8.9E-31 237.4 23.0 342 102-506 27-399 (411)
87 3hdo_A Histidinol-phosphate am 99.9 4E-26 1.4E-30 231.7 23.0 326 97-502 23-354 (360)
88 3g0t_A Putative aminotransfera 99.9 6.2E-26 2.1E-30 236.2 24.9 348 89-501 33-435 (437)
89 3f9t_A TDC, L-tyrosine decarbo 99.9 1.7E-25 5.8E-30 229.0 26.8 332 117-501 42-396 (397)
90 3op7_A Aminotransferase class 99.9 3.9E-26 1.3E-30 232.9 21.7 299 144-504 63-372 (375)
91 1t3i_A Probable cysteine desul 99.9 1.2E-25 4.1E-30 232.3 25.6 348 97-504 24-414 (420)
92 1elu_A L-cysteine/L-cystine C- 99.9 2.7E-26 9.2E-31 234.8 20.1 337 98-498 15-387 (390)
93 2x5f_A Aspartate_tyrosine_phen 99.9 4E-26 1.4E-30 237.4 21.6 346 100-503 47-429 (430)
94 3ke3_A Putative serine-pyruvat 99.9 1E-25 3.5E-30 230.6 22.1 337 93-504 5-377 (379)
95 3fvs_A Kynurenine--oxoglutarat 99.9 3.3E-25 1.1E-29 229.6 25.8 361 100-502 28-421 (422)
96 3fkd_A L-threonine-O-3-phospha 99.9 4.2E-25 1.4E-29 223.2 25.8 326 87-502 2-341 (350)
97 1ajs_A Aspartate aminotransfer 99.9 3.9E-26 1.3E-30 236.0 18.5 348 98-502 28-410 (412)
98 3qgu_A LL-diaminopimelate amin 99.9 5E-26 1.7E-30 238.0 19.5 351 91-503 60-440 (449)
99 1iay_A ACC synthase 2, 1-amino 99.9 1.5E-25 5.2E-30 232.8 22.7 343 101-502 37-426 (428)
100 3get_A Histidinol-phosphate am 99.9 4.4E-25 1.5E-29 224.2 24.5 324 99-500 29-364 (365)
101 2q7w_A Aspartate aminotransfer 99.9 3.9E-26 1.3E-30 234.5 16.8 340 94-500 20-396 (396)
102 2dr1_A PH1308 protein, 386AA l 99.9 1.8E-24 6.1E-29 220.9 28.4 338 100-505 20-381 (386)
103 3e2y_A Kynurenine-oxoglutarate 99.9 8.8E-25 3E-29 225.5 26.3 356 100-498 23-408 (410)
104 3lvm_A Cysteine desulfurase; s 99.9 5.1E-25 1.7E-29 228.2 24.0 344 97-505 20-401 (423)
105 1vjo_A Alanine--glyoxylate ami 99.9 1E-24 3.5E-29 223.7 24.8 331 99-500 33-392 (393)
106 1fg7_A Histidinol phosphate am 99.9 4.5E-25 1.5E-29 223.8 21.7 316 99-498 28-353 (356)
107 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 1.3E-25 4.5E-30 228.3 16.3 330 100-502 9-369 (371)
108 3t18_A Aminotransferase class 99.9 4.4E-25 1.5E-29 228.3 20.1 345 99-504 36-411 (413)
109 2ay1_A Aroat, aromatic amino a 99.9 1.3E-25 4.6E-30 230.4 15.6 339 98-499 24-392 (394)
110 2dkj_A Serine hydroxymethyltra 99.9 1.4E-24 4.9E-29 223.6 23.0 342 100-512 23-402 (407)
111 1ax4_A Tryptophanase; tryptoph 99.9 1.4E-24 4.8E-29 228.1 22.2 358 98-503 41-441 (467)
112 3zrp_A Serine-pyruvate aminotr 99.9 3E-24 1E-28 218.9 23.9 322 117-504 13-364 (384)
113 3ei9_A LL-diaminopimelate amin 99.9 2.8E-24 9.5E-29 223.6 24.0 347 94-500 50-425 (432)
114 3kgw_A Alanine-glyoxylate amin 99.9 8.5E-25 2.9E-29 223.8 19.4 324 117-503 34-388 (393)
115 3rq1_A Aminotransferase class 99.9 7.9E-25 2.7E-29 226.7 19.0 345 99-503 37-415 (418)
116 1bw0_A TAT, protein (tyrosine 99.9 9.4E-24 3.2E-28 218.3 26.9 347 100-503 33-413 (416)
117 3asa_A LL-diaminopimelate amin 99.9 2.1E-24 7.1E-29 222.3 21.8 336 98-503 31-393 (400)
118 1qz9_A Kynureninase; kynurenin 99.9 3.7E-24 1.3E-28 221.2 23.1 342 98-503 27-402 (416)
119 2oqx_A Tryptophanase; lyase, p 99.9 5E-25 1.7E-29 231.5 16.6 360 99-503 40-442 (467)
120 1svv_A Threonine aldolase; str 99.9 2.4E-24 8.3E-29 217.6 20.2 329 102-503 15-358 (359)
121 3nnk_A Ureidoglycine-glyoxylat 99.9 1.2E-23 4.3E-28 216.6 23.8 325 117-504 24-391 (411)
122 1eg5_A Aminotransferase; PLP-d 99.9 1.7E-23 5.9E-28 213.3 24.4 337 101-505 3-378 (384)
123 1m32_A 2-aminoethylphosphonate 99.9 8.8E-24 3E-28 213.9 21.1 336 102-502 5-364 (366)
124 3f0h_A Aminotransferase; RER07 99.9 2.2E-23 7.4E-28 212.4 23.1 319 117-501 30-372 (376)
125 3cai_A Possible aminotransfera 99.9 3.9E-23 1.3E-27 212.8 24.6 336 98-498 25-404 (406)
126 1b5p_A Protein (aspartate amin 99.9 8.3E-23 2.8E-27 209.3 26.0 339 98-501 29-383 (385)
127 2huf_A Alanine glyoxylate amin 99.9 3.2E-23 1.1E-27 212.4 22.3 339 97-505 16-385 (393)
128 3e9k_A Kynureninase; kynurenin 99.9 1.4E-23 4.6E-28 220.7 19.0 351 98-503 66-461 (465)
129 3g7q_A Valine-pyruvate aminotr 99.9 6.1E-23 2.1E-27 212.1 23.1 308 146-505 77-415 (417)
130 2z9v_A Aspartate aminotransfer 99.9 1.3E-22 4.6E-27 207.7 24.9 337 99-504 8-372 (392)
131 3ez1_A Aminotransferase MOCR f 99.9 2.1E-23 7.2E-28 216.3 18.3 345 103-505 28-417 (423)
132 2ez2_A Beta-tyrosinase, tyrosi 99.9 1.7E-22 6E-27 211.5 25.0 351 98-503 40-431 (456)
133 3mad_A Sphingosine-1-phosphate 99.9 2.1E-22 7E-27 214.4 25.1 340 116-505 107-471 (514)
134 1v72_A Aldolase; PLP-dependent 99.9 3.9E-23 1.3E-27 208.6 18.3 326 100-504 7-354 (356)
135 2r2n_A Kynurenine/alpha-aminoa 99.9 4.1E-22 1.4E-26 206.9 26.1 304 142-502 80-423 (425)
136 3if2_A Aminotransferase; YP_26 99.9 1.8E-22 6.1E-27 210.6 23.0 309 146-504 85-441 (444)
137 2oga_A Transaminase; PLP-depen 99.9 8.4E-23 2.9E-27 210.3 19.9 327 100-503 30-396 (399)
138 2yrr_A Aminotransferase, class 99.9 9.1E-23 3.1E-27 205.4 18.7 320 117-501 11-351 (353)
139 4hvk_A Probable cysteine desul 99.9 4.5E-22 1.5E-26 202.4 24.0 339 101-505 2-375 (382)
140 4f4e_A Aromatic-amino-acid ami 99.9 6.8E-23 2.3E-27 212.4 17.6 342 99-500 48-419 (420)
141 1iug_A Putative aspartate amin 99.9 1.9E-22 6.4E-27 203.2 20.4 318 117-503 12-348 (352)
142 3isl_A Purine catabolism prote 99.9 2.9E-22 9.8E-27 206.8 21.9 331 113-503 14-390 (416)
143 3p1t_A Putative histidinol-pho 99.9 8.4E-22 2.9E-26 197.5 24.6 314 98-500 14-334 (337)
144 2vi8_A Serine hydroxymethyltra 99.9 2.9E-22 1E-26 206.1 21.7 331 100-503 24-387 (405)
145 1uu1_A Histidinol-phosphate am 99.9 5.2E-22 1.8E-26 199.3 22.9 311 100-499 19-334 (335)
146 2ch1_A 3-hydroxykynurenine tra 99.9 3.7E-22 1.3E-26 204.7 22.2 324 117-504 29-384 (396)
147 1cs1_A CGS, protein (cystathio 99.9 1.1E-21 3.6E-26 201.1 25.2 281 142-499 50-383 (386)
148 3a9z_A Selenocysteine lyase; P 99.9 3.9E-22 1.3E-26 207.2 21.9 361 97-504 16-429 (432)
149 1yaa_A Aspartate aminotransfer 99.9 1.4E-22 4.9E-27 209.2 18.1 339 98-502 27-410 (412)
150 3fsl_A Aromatic-amino-acid ami 99.9 1.6E-22 5.5E-27 207.6 17.7 338 99-499 25-396 (397)
151 2cb1_A O-acetyl homoserine sul 99.9 1.9E-21 6.4E-26 201.2 25.8 305 112-498 28-411 (412)
152 4eb5_A Probable cysteine desul 99.9 2.1E-21 7.3E-26 197.7 25.6 339 101-505 2-375 (382)
153 2rfv_A Methionine gamma-lyase; 99.9 3.8E-22 1.3E-26 205.3 20.0 284 142-499 62-396 (398)
154 3d6k_A Putative aminotransfera 99.9 1.6E-22 5.6E-27 209.7 16.9 343 102-504 34-419 (422)
155 1wyu_B Glycine dehydrogenase s 99.9 2.3E-21 7.7E-26 204.2 25.3 333 114-502 75-440 (474)
156 3ppl_A Aspartate aminotransfer 99.9 1.8E-22 6.1E-27 209.6 14.9 303 144-504 78-421 (427)
157 3vax_A Putative uncharacterize 99.9 1.5E-22 5.2E-27 207.8 13.3 343 93-502 14-399 (400)
158 1gc0_A Methionine gamma-lyase; 99.9 6.9E-21 2.3E-25 196.0 25.1 283 142-499 63-397 (398)
159 3mc6_A Sphingosine-1-phosphate 99.9 1.3E-21 4.4E-26 207.4 20.1 334 116-504 75-438 (497)
160 3qhx_A Cystathionine gamma-syn 99.9 4.8E-21 1.6E-25 196.8 21.0 281 142-496 64-391 (392)
161 1jg8_A L-ALLO-threonine aldola 99.9 2.2E-20 7.4E-25 188.1 25.3 331 100-502 3-345 (347)
162 3f6t_A Aspartate aminotransfer 99.9 4.4E-22 1.5E-26 212.5 13.5 370 99-508 98-530 (533)
163 3ecd_A Serine hydroxymethyltra 99.9 1.7E-20 5.7E-25 194.1 24.4 330 102-503 34-397 (425)
164 2qma_A Diaminobutyrate-pyruvat 99.9 1.4E-20 4.7E-25 199.4 24.2 359 97-503 98-496 (497)
165 3uwc_A Nucleotide-sugar aminot 99.9 1.3E-21 4.5E-26 199.1 14.0 309 121-502 21-370 (374)
166 3lws_A Aromatic amino acid bet 99.9 3.3E-21 1.1E-25 194.9 16.1 328 100-500 3-356 (357)
167 2fnu_A Aminotransferase; prote 99.9 1.3E-20 4.3E-25 191.7 20.1 318 117-503 11-372 (375)
168 3h7f_A Serine hydroxymethyltra 99.9 4.7E-20 1.6E-24 192.7 24.9 319 117-502 57-413 (447)
169 1mdo_A ARNB aminotransferase; 99.9 3.9E-20 1.3E-24 189.4 23.5 314 118-503 19-386 (393)
170 2po3_A 4-dehydrase; external a 99.9 1.2E-19 4E-24 188.3 26.5 323 112-506 26-389 (424)
171 1pff_A Methionine gamma-lyase; 99.9 1.2E-20 4.3E-25 188.7 18.1 276 148-499 2-330 (331)
172 3gbx_A Serine hydroxymethyltra 99.9 6E-21 2E-25 197.1 16.2 319 117-502 42-395 (420)
173 3dr4_A Putative perosamine syn 99.9 6.9E-21 2.4E-25 195.2 16.4 313 118-500 35-390 (391)
174 3n0l_A Serine hydroxymethyltra 99.8 3E-19 1E-23 184.3 28.3 330 102-502 27-388 (417)
175 3acz_A Methionine gamma-lyase; 99.8 5.9E-20 2E-24 188.5 22.7 252 142-471 57-330 (389)
176 3frk_A QDTB; aminotransferase, 99.8 1.5E-20 5.1E-25 191.5 17.3 314 112-501 6-366 (373)
177 3meb_A Aspartate aminotransfer 99.8 1.8E-20 6.3E-25 195.9 17.9 340 98-502 46-443 (448)
178 1b9h_A AHBA synthase, protein 99.8 1.9E-19 6.5E-24 184.2 24.3 318 118-502 16-387 (388)
179 2bkw_A Alanine-glyoxylate amin 99.8 4.3E-20 1.5E-24 188.3 19.3 323 117-502 16-383 (385)
180 4eu1_A Mitochondrial aspartate 99.8 7.1E-21 2.4E-25 196.4 13.6 333 100-500 41-408 (409)
181 3tcm_A Alanine aminotransferas 99.8 3.9E-19 1.3E-23 188.3 26.5 344 117-507 107-498 (500)
182 3ffr_A Phosphoserine aminotran 99.8 2.5E-19 8.6E-24 180.9 22.2 317 117-500 15-361 (362)
183 3pj0_A LMO0305 protein; struct 99.8 2.7E-20 9.3E-25 188.3 15.0 312 118-499 28-358 (359)
184 3nyt_A Aminotransferase WBPE; 99.8 1.7E-19 5.9E-24 183.3 20.7 312 112-499 5-360 (367)
185 3ndn_A O-succinylhomoserine su 99.8 6E-20 2.1E-24 189.8 17.4 287 142-500 79-413 (414)
186 1e5e_A MGL, methionine gamma-l 99.8 1.4E-19 4.8E-24 186.6 19.5 281 143-504 61-396 (404)
187 1o69_A Aminotransferase; struc 99.8 4.6E-19 1.6E-23 182.0 22.8 326 118-501 11-385 (394)
188 2ctz_A O-acetyl-L-homoserine s 99.8 1.3E-19 4.5E-24 187.8 18.9 240 142-440 56-346 (421)
189 3nmy_A Xometc, cystathionine g 99.8 1.3E-19 4.6E-24 186.3 17.7 233 142-440 65-322 (400)
190 2aeu_A Hypothetical protein MJ 99.8 1.4E-19 4.9E-24 184.6 17.0 323 98-503 25-371 (374)
191 2c81_A Glutamine-2-deoxy-scyll 99.8 1.9E-18 6.4E-23 178.8 23.8 322 118-502 15-413 (418)
192 3b8x_A WBDK, pyridoxamine 5-ph 99.8 3.9E-18 1.3E-22 174.7 25.0 323 109-496 3-389 (390)
193 3ihj_A Alanine aminotransferas 99.8 4.6E-18 1.6E-22 179.9 24.8 342 117-506 102-496 (498)
194 2jis_A Cysteine sulfinic acid 99.8 7.8E-18 2.7E-22 179.0 26.6 328 144-501 148-513 (515)
195 1n8p_A Cystathionine gamma-lya 99.8 1.2E-18 4.2E-23 178.8 19.1 281 143-499 54-391 (393)
196 7aat_A Aspartate aminotransfer 99.8 2.7E-18 9.3E-23 176.4 21.0 336 102-500 30-400 (401)
197 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 6.7E-18 2.3E-22 175.8 23.9 333 98-501 29-434 (437)
198 1qgn_A Protein (cystathionine 99.8 6.5E-18 2.2E-22 175.7 23.1 284 142-502 112-444 (445)
199 1ibj_A CBL, cystathionine beta 99.8 7.8E-19 2.7E-23 183.9 15.6 282 143-502 132-461 (464)
200 2okj_A Glutamate decarboxylase 99.8 1.6E-17 5.4E-22 176.2 25.7 328 146-503 134-502 (504)
201 3cog_A Cystathionine gamma-lya 99.8 7.2E-18 2.5E-22 173.7 20.3 282 143-500 66-399 (403)
202 2dgk_A GAD-beta, GADB, glutama 99.8 1.8E-16 6.1E-21 165.7 29.9 344 117-505 54-436 (452)
203 2x3l_A ORN/Lys/Arg decarboxyla 99.8 1.3E-18 4.5E-23 181.6 12.2 290 142-503 55-353 (446)
204 2zy4_A L-aspartate beta-decarb 99.7 5.1E-17 1.7E-21 173.5 20.8 363 102-508 106-527 (546)
205 3vp6_A Glutamate decarboxylase 99.7 1.3E-15 4.3E-20 161.7 28.3 359 117-502 107-504 (511)
206 2z67_A O-phosphoseryl-tRNA(SEC 99.7 4E-16 1.4E-20 163.3 23.0 293 145-500 134-455 (456)
207 3hbx_A GAD 1, glutamate decarb 99.7 1.7E-15 5.7E-20 160.5 26.5 344 117-505 68-446 (502)
208 1w23_A Phosphoserine aminotran 99.7 2.4E-17 8.1E-22 166.6 11.5 317 116-502 13-359 (360)
209 3k7y_A Aspartate aminotransfer 99.7 2E-16 6.9E-21 162.7 18.2 334 101-501 30-403 (405)
210 4h51_A Aspartate aminotransfer 99.7 9.7E-17 3.3E-21 165.4 15.8 350 102-505 46-419 (420)
211 2fyf_A PSAT, phosphoserine ami 99.7 2.9E-16 1E-20 161.2 19.0 317 117-502 51-397 (398)
212 1rv3_A Serine hydroxymethyltra 99.7 6E-16 2.1E-20 163.1 21.8 327 116-502 55-430 (483)
213 3ri6_A O-acetylhomoserine sulf 99.7 2.2E-16 7.6E-21 163.6 17.9 234 142-439 80-355 (430)
214 4e1o_A HDC, histidine decarbox 99.7 1.9E-15 6.4E-20 159.2 24.3 345 118-504 91-479 (481)
215 3ht4_A Aluminum resistance pro 99.7 1.9E-16 6.6E-21 164.1 16.4 297 117-466 36-345 (431)
216 2a7v_A Serine hydroxymethyltra 99.7 1.1E-15 3.8E-20 160.3 20.2 321 117-502 66-440 (490)
217 2fq6_A Cystathionine beta-lyas 99.7 1E-15 3.5E-20 158.0 18.7 285 142-498 80-413 (415)
218 2c0r_A PSAT, phosphoserine ami 99.7 2.4E-16 8.2E-21 159.5 13.3 328 99-502 3-360 (362)
219 1js3_A DDC;, DOPA decarboxylas 99.7 1.3E-14 4.5E-19 153.0 26.2 344 121-506 90-477 (486)
220 3k40_A Aromatic-L-amino-acid d 99.7 4.5E-15 1.6E-19 156.0 21.7 317 145-504 114-472 (475)
221 3ju7_A Putative PLP-dependent 99.6 8.6E-15 2.9E-19 149.3 21.4 318 117-502 14-374 (377)
222 3bwn_A AT1G70560, L-tryptophan 99.6 6.2E-16 2.1E-20 158.6 12.4 273 147-502 71-386 (391)
223 3jzl_A Putative cystathionine 99.6 1.7E-14 5.8E-19 148.3 20.1 293 117-467 30-340 (409)
224 1c4k_A Protein (ornithine deca 99.6 1.5E-13 5.1E-18 150.5 22.6 322 143-504 172-567 (730)
225 3hvy_A Cystathionine beta-lyas 99.5 3.9E-13 1.4E-17 138.6 22.4 294 117-466 45-356 (427)
226 3i16_A Aluminum resistance pro 99.5 4.5E-13 1.6E-17 138.2 22.2 289 118-466 45-356 (427)
227 1wyu_A Glycine dehydrogenase ( 99.5 7.6E-14 2.6E-18 145.1 14.5 290 143-500 107-437 (438)
228 3e77_A Phosphoserine aminotran 99.5 2.4E-14 8.3E-19 145.1 9.9 330 114-502 21-374 (377)
229 2hox_A ALLIIN lyase 1; cystein 99.5 5.7E-14 2E-18 145.6 12.5 325 98-501 54-423 (427)
230 3m5u_A Phosphoserine aminotran 99.5 7.3E-13 2.5E-17 133.7 18.7 329 101-502 5-359 (361)
231 3qm2_A Phosphoserine aminotran 99.5 6.6E-14 2.3E-18 142.6 10.3 331 100-502 27-384 (386)
232 2vyc_A Biodegradative arginine 99.5 2.2E-12 7.5E-17 142.4 21.9 318 144-503 205-605 (755)
233 3hl2_A O-phosphoseryl-tRNA(SEC 99.4 4.1E-11 1.4E-15 121.7 23.8 296 162-507 134-465 (501)
234 3n75_A LDC, lysine decarboxyla 99.4 2.8E-11 9.4E-16 131.6 23.8 316 142-501 193-558 (715)
235 3bc8_A O-phosphoseryl-tRNA(SEC 99.3 1.1E-10 3.7E-15 119.9 20.1 308 147-505 101-445 (450)
236 3ou5_A Serine hydroxymethyltra 98.7 6.3E-07 2.1E-11 90.8 19.3 322 117-501 66-439 (490)
237 1k7c_A Rhamnogalacturonan acet 39.6 38 0.0013 30.5 5.4 52 258-309 112-167 (233)
238 1tks_A 3,4-dihydroxy-2-butanon 37.3 34 0.0012 30.4 4.4 37 270-310 158-194 (204)
239 3pzt_A Endoglucanase; alpha/be 35.6 78 0.0027 30.2 7.3 52 258-312 72-125 (327)
240 2wuj_A Septum site-determining 35.6 41 0.0014 23.1 3.8 30 483-512 19-48 (57)
241 3mio_A DHBP synthase, 3,4-dihy 33.9 53 0.0018 29.2 5.1 37 270-310 157-194 (206)
242 1g57_A DHBP synthase, 3,4-dihy 28.4 72 0.0025 28.6 5.1 36 270-310 166-201 (217)
243 1snn_A DHBP synthase, 3,4-dihy 26.6 78 0.0027 28.6 5.0 36 270-310 177-212 (227)
244 1vhx_A Putative holliday junct 26.5 76 0.0026 26.6 4.7 56 257-315 44-101 (150)
245 7a3h_A Endoglucanase; hydrolas 24.1 1.8E+02 0.0063 27.0 7.6 53 258-313 47-101 (303)
246 3o63_A Probable thiamine-phosp 20.6 65 0.0022 29.5 3.3 19 294-312 85-103 (243)
247 2fqm_A Phosphoprotein, P prote 20.5 1.5E+02 0.0051 21.1 4.3 31 474-504 18-48 (75)
248 2jtq_A Phage shock protein E; 20.1 2.5E+02 0.0084 20.1 6.6 53 146-207 26-78 (85)
249 1k4i_A 3,4-dihydroxy-2-butanon 20.1 1.2E+02 0.004 27.5 4.8 37 270-310 166-212 (233)
250 2cks_A Endoglucanase E-5; carb 20.0 1.8E+02 0.0062 27.1 6.6 53 258-313 46-101 (306)
No 1
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=100.00 E-value=1.6e-88 Score=710.62 Aligned_cols=438 Identities=40% Similarity=0.796 Sum_probs=402.7
Q ss_pred ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250 68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 147 (514)
Q Consensus 68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ 147 (514)
.|+||++........|++|++|+|+||||+|||+||||.+|+|+++|||+||+|++|+.+|++++.+++.+++.++++..
T Consensus 35 ~~h~~t~~~~~~~~~P~vi~rg~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~~ 114 (473)
T 4e3q_A 35 SLYGFTDMPSLHQRGTVVVTHGEGPYIVDVNGRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERFPGYHAFFGRMSDQTV 114 (473)
T ss_dssp BCCSSCCHHHHHHHCCEEEEEEETTEEEETTCCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHCCCCCCCTTEEEHHHH
T ss_pred cCCCCCChhhhccCCCEEEEeeecCEEEeCCCCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhcccccccccccCHHHH
Confidence 57898875443345799999999999999999999999999999999999999999999999998877777777788899
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250 148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 227 (514)
Q Consensus 148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~ 227 (514)
+|+++|++..+ .++++|+|+|||+||||.|||+||+|+.++++++|.+||.+.++|||+|.+++++++.+ ++..+.++
T Consensus 115 ~lAe~L~~~~p-~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~-~~~~~~~~ 192 (473)
T 4e3q_A 115 MLSEKLVEVSP-FDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKP-YNSVFGLP 192 (473)
T ss_dssp HHHHHHHHHSS-CSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCG-GGGGGTCS
T ss_pred HHHHHHHhhCC-CCccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccc-cccccCCC
Confidence 99999999974 46889999999999999999999999999999999999999999999999999999865 56677888
Q ss_pred CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCE
Q 010250 228 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 307 (514)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gil 307 (514)
.+...++++|++|++..+.+..+.+...+.+++++.+.+.+++++|+||+||+||++|+++|+++||++|+++|++||++
T Consensus 193 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gil 272 (473)
T 4e3q_A 193 LPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIP 272 (473)
T ss_dssp CTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCC
T ss_pred CCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceE
Confidence 88889999999999988888889999888999999999888889999999999999999999999999999999999999
Q ss_pred EEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHH
Q 010250 308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV 387 (514)
Q Consensus 308 lI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aa 387 (514)
||+|||||||||||++|+++++|+.||++|++|+|+||++|+|++++++++++.+.......+.+.|++||++||++|++
T Consensus 273 LI~DEV~tGfGRtG~~fa~e~~gv~PDi~t~~K~l~gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aa 352 (473)
T 4e3q_A 273 VISDEVICGFGRTGNTWGCVTYDFTPDAIISSKNLTAGFFPMGAVILGPELSKRLETAIEAIEEFPHGFTASGHPVGCAI 352 (473)
T ss_dssp EEEECTTTSSSTTSSSCHHHHTTCCCSEEEECGGGGTTSSCCEEEEECHHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHH
T ss_pred EeccCccccCCcccchhHHHhcCCCCChHHhcccccCCCCCcccccccHHHHHHhccccccccccccCCCCCCCcchhhh
Confidence 99999999999999999999999999999999999999999999999999999886532223467899999999999999
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCc
Q 010250 388 AIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM 467 (514)
Q Consensus 388 a~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 467 (514)
|+++|++++++++.+++++++++|+++|+++.+.+.+.++||.|+|+++++..+.....++.........+...|+++|+
T Consensus 353 ala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vRG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gl 432 (473)
T 4e3q_A 353 ALKAIDVVMNEGLAENVRRLAPRFEERLKHIAERPNIGEYRGIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGL 432 (473)
T ss_dssp HHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTE
T ss_pred hhhhhhhhccccHHHHHHHHHHHHHHHHHHHhcCCCeeEEeecceEEEEEEecCccccccccccHHHHHHHHHHHHHCCc
Confidence 99999999999999999999999999999997778899999999999999988777777776666778889999999999
Q ss_pred EEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010250 468 LVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERV 507 (514)
Q Consensus 468 ~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~ 507 (514)
++++.|+.|||.||+++|++|||+++++|+++++++..++
T Consensus 433 l~~~~g~~i~l~PPL~it~~eid~~~~~l~~al~~v~ael 472 (473)
T 4e3q_A 433 ICRPLGQSVVLCPPFILTEAQMDEMFDKLEKALDKVFAEV 472 (473)
T ss_dssp ECEEETTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999887654
No 2
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=100.00 E-value=2.2e-79 Score=639.15 Aligned_cols=417 Identities=26% Similarity=0.452 Sum_probs=356.6
Q ss_pred cccccccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC
Q 010250 54 QKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP 133 (514)
Q Consensus 54 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~ 133 (514)
++..+..+++.+..+..+ +|+++++|+|+|+||+|||+||||++|+|+++|||+||+|++|+.+|++++.
T Consensus 28 ~~l~~r~~~~~~~~~~~~----------~P~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~ 97 (456)
T 4atq_A 28 QALAERRSAVVAAGVASG----------VPVYVEDADGGIIRDVDGNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFT 97 (456)
T ss_dssp HHHHHHHHHHBCTTCCCS----------CSSCEEEEETTEEEETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHhCCCCCCCC----------CCCeEEeeecCEEEeCCCCEEEEccccHHHHhcCCCCHHHHHHHHHHHhhcc
Confidence 444555666665554333 7899999999999999999999999999999999999999999999999875
Q ss_pred ccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee
Q 010250 134 FYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS 213 (514)
Q Consensus 134 ~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~ 213 (514)
+. .++..+++...+|+++|+++++...+++|+|+|||+||||.|||+||.| ++|.+||.|+++|||+|.++++
T Consensus 98 ~~-~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e~AlklAr~~------t~r~~ii~~~~~yHG~t~~als 170 (456)
T 4atq_A 98 HT-CFMVTPYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVENAVKVARLA------TGRDAVVAFDHAYHGRTNLTMA 170 (456)
T ss_dssp CC-TTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHH------HCCCEEEEETTCCCCSSHHHHH
T ss_pred Cc-ccCccCcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHHHHHHHHhhh------hcCCeEEEEecccCCccccccc
Confidence 53 3334567888999999999986556889999999999999999999988 5688999999999999999999
Q ss_pred cCCCcc-ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChh
Q 010250 214 LSGLPA-LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPAT 292 (514)
Q Consensus 214 ~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~ 292 (514)
+++.+. ++..+++..+.+.+++++..++...+..+..+......+.+++ ..+++++|+||+||+||++|+++|+++
T Consensus 171 ~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~---~~~~~~iAAvivEPiqg~gG~~~p~~~ 247 (456)
T 4atq_A 171 LTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEK---QIGGDQVAAIIIEPIQGEGGFIVPAEG 247 (456)
T ss_dssp HCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHH---HTCGGGEEEEEECSSBTTTTCBCCCTT
T ss_pred cccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHH---hhcCCceEEEEeccccCCCCccccchh
Confidence 888764 4556666667788888888777766665555444433344433 334678999999999999999999999
Q ss_pred HHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcc
Q 010250 293 YFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF 372 (514)
Q Consensus 293 ~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~ 372 (514)
||++|+++|++||++||+|||||||||+|++|+++++|+.|||+|+||+++|| +|+|++++++++++.+. ..
T Consensus 248 fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lggg-~P~~av~~~~~i~~~~~-------~~ 319 (456)
T 4atq_A 248 FLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITMAKGIAGG-LPLSAITGRADLLDAVH-------PG 319 (456)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGGGTT-SSCEEEEEEHHHHTTSC-------TT
T ss_pred hhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchhhhhhcccCc-CCceeeEecHHHHhccc-------cc
Confidence 99999999999999999999999999999999999999999999999999988 79999999999999886 34
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cC-----CCceeEEEeeeeeEEEEEccCCCCCC
Q 010250 373 SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SD-----SPIIGEIRGTGLILGTEFADNKSPNE 446 (514)
Q Consensus 373 ~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~-----~~~~~~v~g~g~~~~i~~~~~~~~~~ 446 (514)
.|++||++||++|++++++|++++++++.+++++++++++++|+++ .+ ++++.+|||.|+|++++|.++... .
T Consensus 320 ~~~~Tf~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~~~-~ 398 (456)
T 4atq_A 320 GLGGTYGGNPVACAAALAAIDTMEQHDLNGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGAMLAIELVQPGSK-E 398 (456)
T ss_dssp SSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEETTEEEEEEBCTTSC-C
T ss_pred CCCCCCCCChHHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecceEEEEEEecCCCC-C
Confidence 6899999999999999999999999999999999999999999987 33 478999999999999999865321 1
Q ss_pred CCCCccchHHHHHHHHHHCCcEEEeeC---CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 447 PFPPEWGIGAYFGAQCEKHGMLVRVSG---DNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 447 ~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
........+...|+++|+++.+.| +.|||.||+++|++|||+++++|+++|+.
T Consensus 399 ---~~~~~~~~v~~~~~~~Gvl~~~~g~~~~~irl~PpL~it~~~id~~l~~l~~al~a 454 (456)
T 4atq_A 399 ---PNAELTKAVAAACLKEGVIILTCGTYGNVIRLLPPLVISDELLIDGLEVLAAAIKA 454 (456)
T ss_dssp ---BCHHHHHHHHHHHHHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ---cCHHHHHHHHHHHHHCCCEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 123356778999999999988654 67999999999999999999999999975
No 3
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=100.00 E-value=1.2e-71 Score=588.63 Aligned_cols=438 Identities=31% Similarity=0.583 Sum_probs=381.6
Q ss_pred ccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCch
Q 010250 66 HDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKP 145 (514)
Q Consensus 66 ~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~ 145 (514)
..+|+||++........|+++++++|+|+||.|||+||||++|+|+++|||+||+|++|+.+|++++.+++.+ .++++.
T Consensus 20 ~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~-~~~~~~ 98 (476)
T 3i5t_A 20 DHILLPAQEMAKLGKSAQPVLTHAEGIYVHTEDGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYASPW-YMATSP 98 (476)
T ss_dssp HHBCCTTEEGGGTTTCCCCBEEEEEBTEEEETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTT-TCBCHH
T ss_pred cccccCcccccccccCCCeeEEEeecCEEEECCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCcccC-ccCCHH
Confidence 3468898875544445789999999999999999999999999999999999999999999999987665443 457788
Q ss_pred HHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCC
Q 010250 146 SLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFD 225 (514)
Q Consensus 146 ~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~ 225 (514)
..+|+++|++.++ .++++|+|+|||+|||+.|+|+++.|+..++.+++++||+++++|||++.+++++++.+.++..+.
T Consensus 99 ~~~la~~l~~~~~-~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~ 177 (476)
T 3i5t_A 99 AARLAEKIATLTP-GDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFD 177 (476)
T ss_dssp HHHHHHHHHTTSS-TTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSC
T ss_pred HHHHHHHHHhcCC-CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccC
Confidence 9999999999874 467899999999999999999999998888888899999999999999999999999988888888
Q ss_pred CCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC
Q 010250 226 LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD 305 (514)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~g 305 (514)
++.+.+.++++|..|+. .+.+.+.+...++++||+++.+.+++++++||+||+++++|+++|+++||++|+++|++||
T Consensus 178 ~~~~~~~~~~~p~~~~~--~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~g 255 (476)
T 3i5t_A 178 IAQDRISFLSSPNPRHA--GNRSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHD 255 (476)
T ss_dssp CCCTTEEEECCCCGGGC--TTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTT
T ss_pred CCCCCcEEeCCCccccc--CCCchHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcC
Confidence 77777888888887776 4456677877788999999987666789999999999999999999999999999999999
Q ss_pred CEEEEechhcCcccccccceec-ccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHH
Q 010250 306 ILFIADEVICAFGRLGTMFGCD-KYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVS 384 (514)
Q Consensus 306 illI~DEv~tG~gr~G~~~~~~-~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~ 384 (514)
++||+||||+||||+|++|+++ ++++.||++||||+|+||++|+|++++++++++.+.......+.+.+++||++||++
T Consensus 256 illI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t~sK~l~~G~~plg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~np~a 335 (476)
T 3i5t_A 256 ILYISDEVVTGFGRCGEWFASEKVFGVVPDIITFAKGVTSGYVPLGGLAISEAVLARISGENAKGSWFTNGYTYSNQPVA 335 (476)
T ss_dssp CEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEEECGGGGTTSSCCEEEEECHHHHHTTSGGGCTTCEECCCCTTTTCHHH
T ss_pred CEEEEEecccCCccccCceeeecccCCCcchhhhhhhhcCCCcCeEEEEECHHHHHHHhcCCcccccccccCCCCcCHHH
Confidence 9999999999999999988888 999999999999999998789999999999999987532222356788999999999
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH
Q 010250 385 CAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK 464 (514)
Q Consensus 385 ~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 464 (514)
|++++++|+.++++++.++++++++++++.|+++.+++.+..+++.|+|+++++.+...+..++.........+.+.|++
T Consensus 336 ~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 415 (476)
T 3i5t_A 336 CAAALANIELMEREGIVDQAREMADYFAAALASLRDLPGVAETRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFE 415 (476)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCC-----CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCceeEEEEecCccccccccchhHHHHHHHHHHHH
Confidence 99999999999888999999999999999999876778899999999999999976543333222222235678889999
Q ss_pred CCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010250 465 HGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERV 507 (514)
Q Consensus 465 ~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~ 507 (514)
+||++.+.|+.|||+||+++|+++|++++++|+++++++.++.
T Consensus 416 ~Gv~v~~~g~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~~~ 458 (476)
T 3i5t_A 416 LGLIVRPLGDLCVISPPLIISRAQIDEMVAIMRQAITEVSAAH 458 (476)
T ss_dssp TTEECEEETTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999889999999999999999999999999998877543
No 4
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=100.00 E-value=6e-72 Score=590.12 Aligned_cols=435 Identities=38% Similarity=0.727 Sum_probs=379.0
Q ss_pred cccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchH
Q 010250 67 DMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPS 146 (514)
Q Consensus 67 ~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~ 146 (514)
.+|+||+.........|+++++++|+|+||.|||+||||++|+|+++|||+||+|++|+.+|++++.+.+++..++++..
T Consensus 22 ~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~ 101 (472)
T 3hmu_A 22 HHLHPFSANNALGEEGTRVITRARGVWLNDSEGEEILDAMAGLWCVNIGYGRDELAEVAARQMRELPYYNTFFKTTHVPA 101 (472)
T ss_dssp HEECTTEEHHHHHHHCCEEEEEEEBTEEEETTCCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCSSSSEECHHH
T ss_pred hccCCcccccccccCCCeeEEEeecCEEEECCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHH
Confidence 36788875322222368999999999999999999999999999999999999999999999998764444445577888
Q ss_pred HHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCC
Q 010250 147 LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDL 226 (514)
Q Consensus 147 ~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~ 226 (514)
.+|+++|+++++ .++++|+|+|||+|||+.|+|+++.|+..++.+++++||+++++|||++.+++++++.+.++..|.
T Consensus 102 ~~lae~l~~~~~-~~~~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~- 179 (472)
T 3hmu_A 102 IALAQKLAELAP-GDLNHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSG- 179 (472)
T ss_dssp HHHHHHHHHHSC-TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTC-
T ss_pred HHHHHHHHHhCC-CCCCEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccC-
Confidence 999999999974 467899999999999999999999998888888899999999999999999999999888887888
Q ss_pred CCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCC
Q 010250 227 PAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDI 306 (514)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gi 306 (514)
+.+.+.+++.|..|+.... .+.+.+...++++|++++.+..++++++||+||+++++|+++|+++||++|+++|++||+
T Consensus 180 ~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gi 258 (472)
T 3hmu_A 180 LIPDVHHINQPNWWAEGGD-MDPEEFGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDI 258 (472)
T ss_dssp CCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTC
T ss_pred CCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCC
Confidence 7777788888876664333 556777777789999999876667899999999999999999999999999999999999
Q ss_pred EEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHH
Q 010250 307 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA 386 (514)
Q Consensus 307 llI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~a 386 (514)
+||+||||+||||+|++|+++++++.||++||||+|+||++|+|++++++++++.+.. +.+.+++||++||++|+
T Consensus 259 llI~DEv~~gfgr~G~~~a~~~~~v~pdi~t~sK~l~gg~~plG~v~~~~~i~~~~~~-----~~~~~~~t~~~np~a~a 333 (472)
T 3hmu_A 259 LLIADEVICGFGRTGNWFGTQTMGIRPHIMTIAKGLSSGYAPIGGSIVCDEVAHVIGK-----DEFNHGYTYSGHPVAAA 333 (472)
T ss_dssp EEEEECTTTTTTTTSSSCHHHHHTCCCSEEEECGGGTTTSSCCEEEEEEHHHHHHHTT-----SCBCCCCTTTTCHHHHH
T ss_pred EEEEEccccCCcccCccchhHHhCCCCceeeechhhhcCCcceEEEEECHHHHHhccc-----CCccccCCCCCCHHHHH
Confidence 9999999999999999999999999999999999999998999999999999999842 35678899999999999
Q ss_pred HHHHHHHHHhhccHHHHHH-HHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCc-cchHHHHHHHHHH
Q 010250 387 VAIEALKIYKERNIVEQVN-KIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPE-WGIGAYFGAQCEK 464 (514)
Q Consensus 387 aa~aal~~~~~~~~~~~~~-~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~l~~ 464 (514)
+++++|+.++++++.++++ ++++++++.|+++.+++.+..+++.|+++++++..+.....++... ......+.+.|++
T Consensus 334 Aa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 413 (472)
T 3hmu_A 334 VALENLRILEEENILDHVRNVAAPYLKEKWEALTDHPLVGEAKIVGMMASIALTPNKASRAKFASEPGTIGYICRERCFA 413 (472)
T ss_dssp HHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGGGSTTEEEEEEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCceEEEEEecCccccccccchhHHHHHHHHHHHHH
Confidence 9999999998889999999 9999999999888667889999999999999997543333333222 2345678899999
Q ss_pred CCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 010250 465 HGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERVKE 509 (514)
Q Consensus 465 ~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~~~ 509 (514)
+||++++.|+.|||+||+++|++||++++++|+++++++.+++..
T Consensus 414 ~Gv~v~~~g~~iRi~p~~~~t~e~i~~~l~~l~~~l~~~~~~~~~ 458 (472)
T 3hmu_A 414 NNLIMRHVGDRMIISPPLVITPAEIDEMFVRIRKSLDEAQAEIEK 458 (472)
T ss_dssp TTBCCEEETTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988999999999999999999999999999988776544
No 5
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=100.00 E-value=6.9e-72 Score=580.11 Aligned_cols=409 Identities=19% Similarity=0.302 Sum_probs=341.9
Q ss_pred cccccccccccccccccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHH
Q 010250 44 ARFYGTDASSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVA 123 (514)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~ 123 (514)
.|+......+++..+..+++.+....+|++.. .++|+++++|+|+||||+|||+||||++++|+++|||+||+|++
T Consensus 35 ~~~~~~~p~s~~~~~~a~~~~pgg~~~~~~~~----~~~P~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~hp~v~~ 110 (454)
T 4ao9_A 35 RRFTDANPASQRQFEAQARYMPGANSRSVLFY----APFPLTIARGEGAALWDADGHRYADFIAEYTAGVYGHSAPEIRD 110 (454)
T ss_dssp HHHHHHCHHHHHHHHHHTTTSGGGCSSGGGCC----SSCCCEEEEEETTEEEETTCCEEEESSGGGGTTTTCSCCHHHHH
T ss_pred HHHhhcCcHhHHHHHHHhhhCCCCCCCCcccc----CCCCccEEEeecCEEEECCCCEEEEccccHHhhcccCCCHHHHH
Confidence 45545556667777778889887777776643 34799999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecC
Q 010250 124 AATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKS 203 (514)
Q Consensus 124 A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~ 203 (514)
|+.+|++++.+. ..++....+++++|++.++ ++++|+|+|||+|||+.|||+||.| ++|++||.|+++
T Consensus 111 Av~~q~~~~~~~----~~~~~~~~~lae~l~~~~p--~~~~v~f~~SGsEA~e~AiklAr~~------tgr~~ii~~~~~ 178 (454)
T 4ao9_A 111 AVIEAMQGGINL----TGHNLLEGRLARLICERFP--QIEQLRFTNSGTEANLMALTAALHF------TGRRKIVVFSGG 178 (454)
T ss_dssp HHHHHHHTCSCC----CSEESSHHHHHHHHHHHST--TCSEEEEESSHHHHHHHHHHHHHHH------HTCCEEEEETTC
T ss_pred HHHHHHhcCCCc----cCCcHHHHHHHHHHHHhCC--CCCEEEEeCchHHHHHHHHHHHHhc------ccCCeEEEEeCC
Confidence 999999876443 2345677899999999985 5789999999999999999999988 478899999999
Q ss_pred CcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCC
Q 010250 204 YHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGA 283 (514)
Q Consensus 204 yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~ 283 (514)
|||++.+..+.++.... +... ..+ | .++++.+++++.+.. +++++||+||++|+
T Consensus 179 yHG~t~~~~~~~~~~~~------~~~~-~~~--p----------------~nd~~~l~~~l~~~~-~~iAavIvEPv~g~ 232 (454)
T 4ao9_A 179 YHGGVLGFGARPSPTTV------PFDF-LVL--P----------------YNDAQTARAQIERHG-PEIAVVLVEPMQGA 232 (454)
T ss_dssp BCSTTCBBSSSBCTTSC------CSEE-EEE--C----------------TTCHHHHHHHHHHTG-GGEEEEEECSEEST
T ss_pred cCCccccccccccCccC------CCCc-ccC--C----------------CchHHHHHHHHhhcC-CceEEEEeccccCC
Confidence 99999877665443221 1110 111 1 122577888887654 57999999999999
Q ss_pred CCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhh
Q 010250 284 GGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIH 363 (514)
Q Consensus 284 ~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~ 363 (514)
+|+++|+++||++|+++|++||++||+||||| ||+|++|+++++|++||++|+||+|+|| +|+|++++++++++.+.
T Consensus 233 ~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~t--GR~G~~~a~e~~gv~PDi~t~gK~lggG-~Piga~~~~~ei~~~~~ 309 (454)
T 4ao9_A 233 SGCIPGQPDFLQALRESATQVGALLVFDEVMT--SRLAPHGLANKLGIRSDLTTLGKYIGGG-MSFGAFGGRADVMALFD 309 (454)
T ss_dssp TTCEECCHHHHHHHHHHHHHHTCEEEEECTTG--GGGSTTCHHHHHTCCCSEEEEEGGGGTT-SSCEEEEECHHHHGGGC
T ss_pred CCccCCchhhHHHHHHHHhhcCCEEEEECCCc--CCCccccchhccCCCCcEEEeccccCCC-CcceeeeeHHHHHHHHh
Confidence 99999999999999999999999999999999 5999999999999999999999999999 79999999999999986
Q ss_pred hccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCC
Q 010250 364 SQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNK 442 (514)
Q Consensus 364 ~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~ 442 (514)
+. .+.+.|++||++||++|++++++|++++++++.+++++++++|+++|+++ .+++++.+++|.|+|++++|.+..
T Consensus 310 ~~---~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~m~gi~f~~~~ 386 (454)
T 4ao9_A 310 PR---TGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEGVAMQFTGIGSLMNAHFVQGD 386 (454)
T ss_dssp TT---TCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEETTEEEEESCCSC
T ss_pred hc---cCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeeeceEEEEEEecCC
Confidence 42 24668999999999999999999999998899999999999999999998 667899999999999999997643
Q ss_pred CCCC--CCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 443 SPNE--PFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 443 ~~~~--~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
.... ....+......+...|+++||++.|.+ ++.+++.+|++|||+++++|++++.+.
T Consensus 387 ~~~~~~~~~~d~~~~~~~~~~ll~~Gv~~~p~~---~~~~s~~~T~~dId~~l~al~~~l~~~ 446 (454)
T 4ao9_A 387 VRSSEDLAAVDGRLRQLLFFHLLNEDIYSSPRG---FVVLSLPLTDADIDRYVAAIGSFIGGH 446 (454)
T ss_dssp CCSGGGGTTCCHHHHHHHHHHHHHTTEECCTTC---EEECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHhhhHHHHHHHHHHHHHCCEEEcCCC---CEEEeCCCCHHHHHHHHHHHHHHHHhc
Confidence 2211 111233345667888999999998765 345667799999999999999999764
No 6
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=100.00 E-value=3.4e-68 Score=560.39 Aligned_cols=438 Identities=38% Similarity=0.704 Sum_probs=368.5
Q ss_pred CccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCc
Q 010250 65 GHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTK 144 (514)
Q Consensus 65 ~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~ 144 (514)
...+|+||++........|+++++|+|+|+||.||++||||.+++|+++|||+||+|++|+.++++++.+.++...++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~ 94 (459)
T 4a6r_A 15 AAHHLHPFTDTASLNQAGARVMTRGEGVYLWDSEGNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELPFYNTFFKTTHP 94 (459)
T ss_dssp -------------------CCEEEEEBTEEEETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCTTSSSCCH
T ss_pred hhhccCCccccccccccCCeeEEEeecCEEEECCCCEEEECCCchhcccCCCCCHHHHHHHHHHHHhccccccccccCCH
Confidence 34468888764433344789999999999999999999999999999999999999999999999987644444455778
Q ss_pred hHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCC
Q 010250 145 PSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF 224 (514)
Q Consensus 145 ~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~ 224 (514)
...+++++|++.++ .+.++|+|++||+||++.|+++++.|+..++.+++++||+++++|||++.+++++++.+.++..+
T Consensus 95 ~~~~la~~l~~~~~-~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 173 (459)
T 4a6r_A 95 AVVELSSLLAEVTP-AGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQG 173 (459)
T ss_dssp HHHHHHHHHHHHSC-TTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---
T ss_pred HHHHHHHHHHHhCC-CCCCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhcccc
Confidence 88999999999874 46789999999999999999999998888888889999999999999999999999988888778
Q ss_pred CCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 010250 225 DLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY 304 (514)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~ 304 (514)
.+..+.+.++++|..|+.... .+.+.+...++++|++++.+..++++++|++||+++++|+++|+++||++|+++|++|
T Consensus 174 ~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~ 252 (459)
T 4a6r_A 174 DLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKY 252 (459)
T ss_dssp CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHT
T ss_pred CCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHc
Confidence 777777778888876664433 5667777777899999988766678999999999999999999999999999999999
Q ss_pred CCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHH
Q 010250 305 DILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVS 384 (514)
Q Consensus 305 gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~ 384 (514)
|++||+||||+||||+|++++++++++.||++||||+|+||++|+|++++++++++.+... +.+.+++||++||++
T Consensus 253 ~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~t~sK~l~gg~~~lg~v~~~~~i~~~~~~~----~~~~~~~t~~~~~~~ 328 (459)
T 4a6r_A 253 DVLLVADEVICGFGRTGEWFGHQHFGFQPDLFTAAKGLSSGYLPIGAVFVGKRVAEGLIAG----GDFNHGFTYSGHPVC 328 (459)
T ss_dssp TCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSSCCEEEEECHHHHHHHHHH----CTTHHHHHHCSCHHH
T ss_pred CCEEEEeccccCCCcccccchHhhcCCCCCeeehhhhhcCCCCCccceeeCHHHHHHhhcC----CCcccCCCCCCCHHH
Confidence 9999999999999999998889999999999999999999989999999999999988632 244678899999999
Q ss_pred HHHHHHHHHHHhhccHHHHHH-HHHHHHHhhh-hhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH
Q 010250 385 CAVAIEALKIYKERNIVEQVN-KIAPKFQDGV-KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC 462 (514)
Q Consensus 385 ~aaa~aal~~~~~~~~~~~~~-~~~~~l~~~L-~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 462 (514)
|++++++|+.++++++.++++ ++++++++.| +.+.+++.+..+++.|+++++++........++.........+.+.|
T Consensus 329 ~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 408 (459)
T 4a6r_A 329 AAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFEHVDDVRGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIF 408 (459)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEEEEecCccccccccchHHHHHHHHHHH
Confidence 999999999998889999999 9999999999 67777788999999999999999765444444443334467788999
Q ss_pred HHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 010250 463 EKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERVK 508 (514)
Q Consensus 463 ~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~~ 508 (514)
+++||++++.|+.|||+||+++|+++|++++++|+++++++.+++.
T Consensus 409 ~~~Gv~v~~~g~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~~~ 454 (459)
T 4a6r_A 409 FRNNLIMRACGDHIVSAPPLVMTRAEVDEMLAVAERCLEEFEQTLK 454 (459)
T ss_dssp HHTTEECEEETTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCeEEecCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998899999999999999999999999999998876554
No 7
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=100.00 E-value=2.1e-68 Score=562.07 Aligned_cols=439 Identities=40% Similarity=0.740 Sum_probs=381.1
Q ss_pred ccccCCcccc--ccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCC
Q 010250 66 HDMLAPFTAG--WQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTT 143 (514)
Q Consensus 66 ~~~~~p~~~~--~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~ 143 (514)
..+|+||++. |....++|+++++++|+|+||.||++||||.+|+|+++|||+||+|++|+.++++++.+.++...+++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~ 94 (460)
T 3gju_A 15 DHFFHPSTHMGTHARGESPTRIMAGGEGVTVWDNNGRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLAYYHAYVGHGT 94 (460)
T ss_dssp HHCCCTTSCHHHHHHTCSCCCCEEEEEBTEEEETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHSCCCCCTTCCC
T ss_pred cccccCccccccccccCCCceEEEEeeccEEEECCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccccCC
Confidence 3468888753 22234467999999999999999999999999999999999999999999999988664444445677
Q ss_pred chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCC
Q 010250 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK 223 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~ 223 (514)
+...+++++|+++++ .+.++|+|+|||+||++.|+++++.|+..++.+++++||+++++|||++.+++++++.+.++..
T Consensus 95 ~~~~~la~~l~~~~~-~~~~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 173 (460)
T 3gju_A 95 EASITLAKMIIDRAP-KGMSRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNA 173 (460)
T ss_dssp HHHHHHHHHHHHHSC-TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTT
T ss_pred HHHHHHHHHHHhhCC-CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccc
Confidence 888999999999863 4678999999999999999999999988888888999999999999999999999998888888
Q ss_pred CCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh
Q 010250 224 FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK 303 (514)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~ 303 (514)
+....+.+.+++.|..|+++..+.+.+++...++++|++++.+.+++++++|++||+++++|+++++++||++|+++|++
T Consensus 174 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~ 253 (460)
T 3gju_A 174 FDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKK 253 (460)
T ss_dssp TTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHH
T ss_pred cCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHH
Confidence 88777778888888888877666777788888889999998876667899999999999999999999999999999999
Q ss_pred cCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHH
Q 010250 304 YDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPV 383 (514)
Q Consensus 304 ~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl 383 (514)
||++||+||||+||||+|++++++++++.||++||||+|+||++|+|++++++++++.+.......+.+.+++||++||+
T Consensus 254 ~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~l~gG~~~lg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~~~~ 333 (460)
T 3gju_A 254 YDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLITIAKGLTSAYAPLSGVIVADRVWQVLVQGSDKLGSLGHGWTYSAHPI 333 (460)
T ss_dssp TTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEECGGGTTTSSCCEEEEEEHHHHHHHHHHHHHHCSCSCCCTTTTCHH
T ss_pred cCCEEEEeccccCCCcccccchHhhcCCCCCeeeeehhhcCCCCCeEEEEECHHHHHHHhcccccccccccCCCCCCCHH
Confidence 99999999999999999998889999999999999999999978999999999999998531000124578899999999
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH
Q 010250 384 SCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC 462 (514)
Q Consensus 384 ~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 462 (514)
+|++++++|+.++++++.++++++++++++.|.+. .+++.+..+++.|+++++++.+......++.........+.+.|
T Consensus 334 ~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 413 (460)
T 3gju_A 334 CVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGEVRGDGMLAAVEFVADKDDRVFFDASQKIGPQVATAL 413 (460)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeeEEEEEEEccCccccccccchHHHHHHHHHHH
Confidence 99999999999988899999999999999999654 67788999999999999999865444444443344567788999
Q ss_pred HHCCcEEEeeC--CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 463 EKHGMLVRVSG--DNIMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 463 ~~~Gv~~~~~g--~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
+++||++++.+ +.|||+||+++|+++|++++++|+++++++.+
T Consensus 414 ~~~Gv~v~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 458 (460)
T 3gju_A 414 AASGVIGRAMPQGDILGFAPPLCLTREQADIVVSKTADAVKSVFA 458 (460)
T ss_dssp HHTTEECEECSSSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHCCeEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999876 78999999999999999999999999987653
No 8
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=100.00 E-value=9.9e-70 Score=603.44 Aligned_cols=435 Identities=21% Similarity=0.290 Sum_probs=348.1
Q ss_pred cCccccCCccccccCCCCCCeEEEeeeCc--EEEeCCCC----EEEEccCCcccccCCCC-CHHHHHHHHHHHhcCCccc
Q 010250 64 KGHDMLAPFTAGWQSTDVHPLVIEKSEGS--YVYDVNGK----KYLDSLAGLWCTALGGS-EPRLVAAATAQLNTLPFYH 136 (514)
Q Consensus 64 ~~~~~~~p~~~~~~~~~~~p~~~~~~~G~--~~~d~dG~----~ylD~~s~~~~~~lGh~-~p~v~~A~~~~l~~~~~~~ 136 (514)
.....|+||++........|++|++|+|. |+||.||| +|||++||+|++++||+ ||+|++|+.+|++++.+.
T Consensus 338 ~~~~~whp~t~~~~~~~~~p~~i~~a~G~g~~l~D~dG~~~~~~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~h~- 416 (831)
T 4a0g_A 338 AGEVFWWPFTQHKLVHQETVTVIDSRCGENFSIYKASDNSSLSQQFDACASWWTQGPDPTFQAELAREMGYTAARFGHV- 416 (831)
T ss_dssp HHHHBCCTTCCGGGCCGGGCEEEEEEETTEEEEEEHHHHSEEEEEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHSSC-
T ss_pred hhhhccCCccCcccccCCCCeEEEEeeccceEEEECCCCccchheeeecccHhhcCCCCCCCHHHHHHHHHHHhhcccc-
Confidence 33457999988643333468999999995 99999999 99999999999999999 999999999999987654
Q ss_pred cccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHH-HHHHhhcCCC--------CccEEEEEecCCccc
Q 010250 137 SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV-WYYNNALGRP--------NKKKFIARQKSYHGS 207 (514)
Q Consensus 137 ~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a-~~~~~~~~~~--------~~~~ii~~~~~yHG~ 207 (514)
.+.+.++++..+|+++|+++++...+++|+|+|||+||||.|||+| ++|+...+.+ +|.+||+++++|||.
T Consensus 417 ~~~~~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~ 496 (831)
T 4a0g_A 417 MFPENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGD 496 (831)
T ss_dssp CCTTEECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCS
T ss_pred cccccCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccC
Confidence 2334578899999999999985434789999999999999999999 6777665542 588999999999999
Q ss_pred ceeeeecCCCccccC--------CCCC--CC------CcccccCCCCcccCCCCCC----C----------hhHHHHHHH
Q 010250 208 TLIAASLSGLPALHQ--------KFDL--PA------PFVLHTDCPHYWRYAHPGE----T----------EEEYSTRLA 257 (514)
Q Consensus 208 t~~~~~~s~~~~~~~--------~~~~--~~------~~~~~~~~~~~~~~~~~~~----~----------~~~~~~~~~ 257 (514)
|++++++++.+.++. ++++ +. +.+.++++|+.|+...+++ + .+.+...+.
T Consensus 497 T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (831)
T 4a0g_A 497 TLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYS 576 (831)
T ss_dssp SHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHH
T ss_pred ceeeeeccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHH
Confidence 999999999766554 1111 11 1234566776665432221 1 112334456
Q ss_pred HHHHHHHHH----hCCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCC
Q 010250 258 NNLEDLILK----EGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK 332 (514)
Q Consensus 258 ~~le~li~~----~~~~~~aavivEpv-~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~ 332 (514)
++|++++.+ .+++++++||+||+ ||++|+++|+++||++|+++|++||++||+|||||||||+|++|+++++|+.
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~ 656 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCK 656 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSC
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCC
Confidence 778887753 34678999999997 9999999999999999999999999999999999999999999999999999
Q ss_pred CchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 010250 333 PDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQ 412 (514)
Q Consensus 333 pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~ 412 (514)
||++|+||+|+|||+|+|++++++++++.+.... ..+.+.|++||++||++|++++++|++++++++.+++++++++++
T Consensus 657 PDiitlsK~L~gG~~Plgav~~~~~i~~~~~~~~-~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~ 735 (831)
T 4a0g_A 657 PDIACFAKLLTGGMVPLAVTLATDAVFDSFSGDS-KLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLR 735 (831)
T ss_dssp CSEEEECGGGGTTSSCCEEEEECHHHHHTTCSSC-GGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBC
T ss_pred CcEEEEecccccCccCcEEEEECHHHHHHHhccc-ccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 9999999999999889999999999999986421 223567999999999999999999999988888888877777665
Q ss_pred hh----h-hhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHH
Q 010250 413 DG----V-KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPE 487 (514)
Q Consensus 413 ~~----L-~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e 487 (514)
+. + +.+.+++.+.+++|.|+|+++++..+.... ++ ....+..+...|+++||++.+.++.|||+||+.+|++
T Consensus 736 ~~l~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~-~~--~~~~a~~~~~~l~e~Gv~v~p~g~~lrl~pp~~~t~e 812 (831)
T 4a0g_A 736 ELWDEELVQQISSHSAVQRVVVIGTLFALELKADASNS-GY--ASLYAKSLLIMLREDGIFTRPLGNVIYLMCGPCTSPE 812 (831)
T ss_dssp CCSCHHHHHHHHHSTTEEEEEEETTEEEEEEC------------CHHHHHHHHHHHHTTEECCCBTTEEEEECCTTCCHH
T ss_pred HHHHHHHHHHHhhCCCceeEeecccEEEEEEecCcccc-cc--chHHHHHHHHHHHHCCcEEEecCCEEEEECCCCCCHH
Confidence 42 2 233456899999999999999997643211 11 1223567889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 010250 488 EVDELISKYGKALKAT 503 (514)
Q Consensus 488 ~id~~~~~l~~~l~~~ 503 (514)
||++++++|+++++++
T Consensus 813 ~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 813 ICRRLLTKLYKRLGEF 828 (831)
T ss_dssp HHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999988643
No 9
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=100.00 E-value=3e-65 Score=536.30 Aligned_cols=432 Identities=31% Similarity=0.574 Sum_probs=345.3
Q ss_pred cccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchH
Q 010250 67 DMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPS 146 (514)
Q Consensus 67 ~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~ 146 (514)
.+|+|+++.... ...|+++++|+|+|+||.|||+||||.+++|+++|||+||+|++|+.++++++.+++. ..++++..
T Consensus 12 ~~~~~~~~~~~~-~~~p~~~~~g~G~~v~d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~-~~~~~~~~ 89 (448)
T 3dod_A 12 HLWLPFTQMKDY-DENPLIIESGTGIKVKDINGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIAHSTL-LGMTNVPA 89 (448)
T ss_dssp HBCCTTCCHHHH-HHSCCEEEEEEBTEEEETTSCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTCSCCCC-SSSEEHHH
T ss_pred cccccccccccc-cCCCceEEEeeeCEEEECCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccc-cccCCHHH
Confidence 367887652111 2368999999999999999999999999999999999999999999999988755432 24466788
Q ss_pred HHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCC
Q 010250 147 LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDL 226 (514)
Q Consensus 147 ~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~ 226 (514)
.+++++|++.++ .+.++|+|++||+||++.|+++++.++..++.+++++||+++++|||++.+++++++.+.++..+.+
T Consensus 90 ~~la~~l~~~~~-~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 168 (448)
T 3dod_A 90 TQLAETLIDISP-KKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGP 168 (448)
T ss_dssp HHHHHHHHHHSC-TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC-------------------------
T ss_pred HHHHHHHHHhCC-CCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccC
Confidence 999999999874 4568999999999999999999998876667666899999999999999999999988877777776
Q ss_pred CCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcccc-CCCCcccCChhHHHHHHHHHHhcC
Q 010250 227 PAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKVQAVVKKYD 305 (514)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~-~~~G~~~p~~~~L~~l~~l~~~~g 305 (514)
..+.+.+++.|+.|+++ +...+.+.++++++||+++.+. ++++++|++||++ +++|+++|+++||++|+++|++||
T Consensus 169 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~le~~l~~~-~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~ 245 (448)
T 3dod_A 169 LMFESYKAPIPYVYRSE--SGDPDECRDQCLRELAQLLEEH-HEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYD 245 (448)
T ss_dssp ----CEEECCCCCTTSS--SCCHHHHHHHHHHHHHHHHHHH-GGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTT
T ss_pred CCCCceEeCCCccccCC--ccchhhhhHHHHHHHHHHHHhC-CCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhC
Confidence 66677788888888876 6667788899999999998732 3579999999999 999999999999999999999999
Q ss_pred CEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHH
Q 010250 306 ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSC 385 (514)
Q Consensus 306 illI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~ 385 (514)
++||+||||+||||+|++++++++++.||++||||++++|++|+|++++++++++.+.......+.+.+++||++||+++
T Consensus 246 ~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~t~sK~l~~G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~ 325 (448)
T 3dod_A 246 VLMIVDEVATGFGRTGKMFACEHENVQPDLMAAGKGITGGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGC 325 (448)
T ss_dssp CEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEEEHHHHHTTCSCGGGCCCCCCCCTTTTCHHHH
T ss_pred CEEEEeccccCCCcccchhhhhhcCCCCCEEEecccccCCcCceEEEEECHHHHHHhhhccccCCcccccCCCCcCHHHH
Confidence 99999999999999999889999999999999999999885699999999999998863100112356889999999999
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC
Q 010250 386 AVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH 465 (514)
Q Consensus 386 aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 465 (514)
++++++|+.++++++.++++++++++++.|+++..++.+..+++.|+++++++.+......++.........+.+.|+++
T Consensus 326 aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 405 (448)
T 3dod_A 326 AVALENLALFESENIVEQVAEKSKKLHFLLQDLHALPHVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMREL 405 (448)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHC
Confidence 99999999998889999999999999999988766788889999999999999765433333333332356788999999
Q ss_pred CcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 466 GMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 466 Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
||++.+.++.|||+|++.+|+++|++++++|+++++++.
T Consensus 406 Gv~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 444 (448)
T 3dod_A 406 GMLTRPLGDVIAFLPPLASTAEELSEMVAIMKQAIHEVT 444 (448)
T ss_dssp TEECCEETTEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEeccCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999987653
No 10
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=100.00 E-value=3.2e-65 Score=536.81 Aligned_cols=410 Identities=24% Similarity=0.459 Sum_probs=344.7
Q ss_pred cccCCccccccCCCCCCeEEEeeeCcEEEeC-CCC--EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCC
Q 010250 67 DMLAPFTAGWQSTDVHPLVIEKSEGSYVYDV-NGK--KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTT 143 (514)
Q Consensus 67 ~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~-dG~--~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~ 143 (514)
.+|+||+.... ....|+++++++|+|+||. ||| +||||.|++|+++|||+||+|++|+.+|++++.+++ +...++
T Consensus 40 ~~~~~~~~~~~-~~~~~~~~~~~~G~~l~d~~dG~~~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~-~~~~~~ 117 (457)
T 3tfu_A 40 HLWHPYSSIGR-EAVSPVVAVAAHGAWLTLIRDGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNHVM-FGGLTH 117 (457)
T ss_dssp HBCCTTCCSSC-CSSCCEEEEEEEBTEEEEEETTEEEEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCSCCC-SSSEEC
T ss_pred hcCcccccccc-cCCCCceEEeeecCEEEEccCCCeeEEEECCCcHhhhccCCCCHHHHHHHHHHHHhccCcc-ccccCC
Confidence 36788775311 1246899999999999999 999 999999999999999999999999999998865442 223467
Q ss_pred chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCC-CccccC
Q 010250 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSG-LPALHQ 222 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~-~~~~~~ 222 (514)
+...+|+++|++.++ .+.++|+|+|||+||++.|+|+++.|+...+.+++++||+++++|||++.+++++++ .+.++.
T Consensus 118 ~~~~~L~e~la~~~~-~~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 196 (457)
T 3tfu_A 118 EPAARLAKLLVDITP-AGLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHS 196 (457)
T ss_dssp HHHHHHHHHHHHHSS-TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC-----
T ss_pred HHHHHHHHHHHHhCC-CCcCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccc
Confidence 788999999999974 467899999999999999999999988777878888999999999999999998854 445555
Q ss_pred CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHH
Q 010250 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVV 301 (514)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEp-v~~~~G~~~p~~~~L~~l~~l~ 301 (514)
.+....+.+..++.|.. .+.++++++|++++.+. ++++++|++|| +||++|+++|+++||++|+++|
T Consensus 197 ~~~~~~~~~~~~~~p~~-----------~~~~~d~~~le~~l~~~-~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~ 264 (457)
T 3tfu_A 197 LWTDVLAAQVFAPQVPR-----------DYDPAYSAAFEAQLAQH-AGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDIC 264 (457)
T ss_dssp -----CCCCEEECCCCS-----------SCCHHHHHHHHHHHHHH-GGGEEEEEECSSEECTTTCEECCTHHHHHHHHHH
T ss_pred cccCCCCCceEecCCCc-----------ccCHHHHHHHHHHHHhC-CCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHH
Confidence 55444444444444421 12345678899888754 35799999999 9999999999999999999999
Q ss_pred HhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCc
Q 010250 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 381 (514)
Q Consensus 302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~ 381 (514)
++||++||+||||+||||+|++++++++++.||++||||+|+||++|+|++++++++++.+... ..+.+.+++||++|
T Consensus 265 ~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdiit~sK~l~gG~~~lG~v~~~~~i~~~~~~~--~~~~~~~~~t~~~n 342 (457)
T 3tfu_A 265 RRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIMCVGKALTGGYLSLAATLCTADVAHTISAG--AAGALMHGPTFMAN 342 (457)
T ss_dssp HHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTTSSCCEEEEEEHHHHHHHHHS--SSCSCCCCCTTTTC
T ss_pred HHcCCEEEEEcCccCCccccchhHhHhcCCCceEEEEChhhhCCCcceEEEEEcHHHHHHhhcc--CCCceeEecCCCcC
Confidence 9999999999999999999999999999999999999999999978999999999999998531 12356788999999
Q ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHH
Q 010250 382 PVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQ 461 (514)
Q Consensus 382 pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (514)
|++|++++++|+.++++++.++++++++++++.|+++.+++.+..+++.|+++++++.+.. ....+.+.
T Consensus 343 ~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~G~~~~i~l~~~~-----------~~~~~~~~ 411 (457)
T 3tfu_A 343 PLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTARALPAVTDVRVCGAIGVIECDRPV-----------DLAVATPA 411 (457)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGGGSTTEEEEEECSSCEEEEESSCC-----------CHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCeeeeecCCeEEEEEECCcc-----------cHHHHHHH
Confidence 9999999999999988899999999999999999988667888899999999999986531 14568899
Q ss_pred HHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 462 CEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 462 l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
|+++||++.+.++.+||+||+++|++||++++++|+++++++.
T Consensus 412 l~~~Gv~v~~~~~~lRi~p~~~~t~eei~~~l~~L~~~l~~~~ 454 (457)
T 3tfu_A 412 ALDRGVWLRPFRNLVYAMPPYICTPAEITQITSAMVEVARLVG 454 (457)
T ss_dssp HHHTTEECCCBTTEEEECCCTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred HHHCCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999987653
No 11
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=100.00 E-value=4.9e-63 Score=519.75 Aligned_cols=401 Identities=25% Similarity=0.444 Sum_probs=339.8
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++|+|+|+||.|||+||||.+++++++|||+||+|++|+.+|++++.+++ +..++.+...+++++|++.++...
T Consensus 43 ~p~~~~~g~G~~v~d~~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~-~~~~~~~~~~~la~~l~~~~~~~~ 121 (451)
T 3oks_A 43 MPVYAVRAGGGIVEDVDGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDFTHTC-FMVTPYEGYVAVCEQLNRLTPVRG 121 (451)
T ss_dssp CSSCEEEEETTEEEETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTCSCCT-TTTSCCHHHHHHHHHHHHHSSCCS
T ss_pred CCceEEEeecCEEEECCCCEEEEcCCCccccccCCCCHHHHHHHHHHHHhccccc-CCccCCHHHHHHHHHHHHhCCcCC
Confidence 7899999999999999999999999999999999999999999999998875432 223467788999999999985444
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-cccCCCCCCCCcccccCCCCcc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYW 240 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
.++|+|+|||+||++.|+|+++.+ +++++||+++++|||++.+++++++.+ .++..+.+..+.+..+++|..|
T Consensus 122 ~~~v~~~~sGseA~~~Alk~a~~~------~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (451)
T 3oks_A 122 DKRSALFNSGSEAVENAVKIARSH------THKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPF 195 (451)
T ss_dssp SEEEEEESSHHHHHHHHHHHHHHH------HCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHH
T ss_pred CCEEEEeCcHHHHHHHHHHHHHHh------cCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccc
Confidence 689999999999999999999877 467899999999999999999998875 6666776666677777777655
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHh-CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~~~-~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr 319 (514)
+.+.++.+.+.+...+++.+++.+.+. .++++++||+||+++++|+++|+++||++|+++|++||++||+||||+||||
T Consensus 196 ~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~ 275 (451)
T 3oks_A 196 RDAEFGKELATDGELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFAR 275 (451)
T ss_dssp HHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTT
T ss_pred cccccccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCc
Confidence 543222222223334456665555532 3468999999999999999999999999999999999999999999999999
Q ss_pred ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 399 (514)
Q Consensus 320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~ 399 (514)
+|++++++++++.||+++|||++++| +|+|++++++++++.+.. ..+++||++||+++++++++|+.+++++
T Consensus 276 ~g~~~~~~~~~~~pdi~t~sK~l~~G-~~iG~v~~~~~~~~~~~~-------~~~~~t~~~~~~~~aaa~aal~~~~~~~ 347 (451)
T 3oks_A 276 TGAMFACEHEGIDPDLIVTAKGIAGG-LPLSAVTGRAEIMDSPHV-------SGLGGTYGGNPIACAAALATIETIESEG 347 (451)
T ss_dssp TSSSSGGGGGTCCCSEEEECGGGGTT-SSCEEEEEEHHHHTCSCT-------TSBCCSSSSCHHHHHHHHHHHHHHHHTT
T ss_pred cccchhhhhcCCCCCeeeehhhhhCC-cceEEEEECHHHHhhhcC-------CCcCCCCCCCHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999998 899999999999988752 3578899999999999999999998889
Q ss_pred HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CE
Q 010250 400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DN 475 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~ 475 (514)
+.++++++++++++.|+++ .+++.+..+++.|+++++++.+.. ... + .......+.+.|+++||++.+.+ +.
T Consensus 348 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~~~~~~-~~~--~-~~~~~~~~~~~l~~~Gv~v~~~~~~~~~ 423 (451)
T 3oks_A 348 LVARAQQIEKIMKDRLGRLQAEDDRIGDVRGRGAMIAMELVKAG-TTE--P-DADLTKALCAGAHAAGVIVLSCGTYGNV 423 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEBSTT-SCC--B-CHHHHHHHHHHHHHTTEECEEECTTSCE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEeeEEEEEEEecCc-cCC--C-CHHHHHHHHHHHHhCCcEEecCCCCCCE
Confidence 9999999999999999987 567888899999999999996521 111 1 11235678899999999999865 67
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 476 IMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 476 iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
+||+||+.+|+++|++++++|+++++
T Consensus 424 iRi~~~~~~t~e~i~~~l~~l~~~l~ 449 (451)
T 3oks_A 424 VRFLPPLSIGDDLLNEGLDVLEEVLR 449 (451)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999885
No 12
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=5.9e-63 Score=519.39 Aligned_cols=400 Identities=27% Similarity=0.464 Sum_probs=339.3
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++++|+|+||.|||+||||.+++++++|||+||+|++|+.++++++.+++ +..++.+...+++++|++.++...
T Consensus 46 ~p~~~~~~~G~~v~d~~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~-~~~~~~~~~~~la~~l~~~~~~~~ 124 (453)
T 4ffc_A 46 APVYAVDADGGVIVDADGNSFIDLGAGIAVTTVGASHPAVAAAIADQATHFTHTC-FMVTPYEQYVQVAELLNALTPGDH 124 (453)
T ss_dssp CSSCEEEEETTEEEETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCT-TTTSCCHHHHHHHHHHHHHSSCSS
T ss_pred CCceEEeeecCEEEeCCCCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhccccc-cCcCCCHHHHHHHHHHHHhCCCCC
Confidence 7899999999999999999999999999999999999999999999998875432 223467888999999999985434
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-cccCCCCCCCCcccccCCCCcc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYW 240 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
.++|+|+|||+||++.|+|+++.+ +++++||+++++|||++.+++++++.+ .++..+.+..+.+..+++|..+
T Consensus 125 ~~~v~~~~sGseA~~~alk~a~~~------~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (453)
T 4ffc_A 125 DKRTALFNSGAEAVENAIKVARLA------TGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPL 198 (453)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHH------HCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTT
T ss_pred CcEEEEeCcHHHHHHHHHHHHHHh------cCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccc
Confidence 689999999999999999999877 467899999999999999999998875 6666676666667777777665
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 320 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~ 320 (514)
+.+. +.+.++....+.+.|++.+ .++++++||+||+++++|+++|+++||++|+++|++||++||+||||+||||+
T Consensus 199 ~~~~-g~~~~~~~~~~~~~l~~~i---~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~ 274 (453)
T 4ffc_A 199 RDEP-GLTGEEAARRAISRIETQI---GAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFART 274 (453)
T ss_dssp TSCT-TCCHHHHHHHHHHHHHHHT---CGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT
T ss_pred cCcc-ccchHHHHHHHHHHHHHhc---CCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcc
Confidence 5432 2222333333344555443 34689999999999999999999999999999999999999999999999999
Q ss_pred cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250 321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI 400 (514)
Q Consensus 321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~ 400 (514)
|.+++++++++.||++||||++++| +|+|++++++++++.+.. ..+++||++||+++++++++|+.++++++
T Consensus 275 g~~~a~~~~~~~pdi~t~sK~~~~G-~~~G~~~~~~~i~~~~~~-------~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 346 (453)
T 4ffc_A 275 GAWFASEHEGIVPDIVTMAKGIAGG-MPLSAVTGRAELMDAVYA-------GGLGGTYGGNPVTCAAAVAALGVMRELDL 346 (453)
T ss_dssp SSSSTHHHHTCCCSEEEECGGGGTT-SSCEEEEEEHHHHTTSCT-------TSSCCSSSSCHHHHHHHHHHHHHHHHTTH
T ss_pred cccchhhhcCCCcchHhhhhhhcCC-cCeEEEEECHHHHhhhcc-------cCcCCCCCcCHHHHHHHHHHHHHhhhhhH
Confidence 9988999999999999999999998 899999999999988753 35788999999999999999999988899
Q ss_pred HHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CEE
Q 010250 401 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNI 476 (514)
Q Consensus 401 ~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~i 476 (514)
.++++++++++++.|+++ .+++.+..+++.|+++++++.+.. ... ........+.+.|+++||++.+.+ +.+
T Consensus 347 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~---~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~i 422 (453)
T 4ffc_A 347 PARARAIEASVTSRLSALAEEVDIIGEVRGRGAMLAIEIVKPG-TLE---PDAALTKSIAAEALSQGVLILTCGTFGNVI 422 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSSEEEEEEETTEEEEEEBCTT-SCC---BCHHHHHHHHHHHHHTTEECCEECTTSCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEEEEeeceEEEEEEecCc-ccC---CCHHHHHHHHHHHHhCCCEEecCCCCCCEE
Confidence 999999999999999987 567888899999999999996521 111 111235678899999999998865 679
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 477 MMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 477 Ri~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
||+||+.+|+++|++++++|+++++++.
T Consensus 423 Ri~~~~~~t~e~i~~~l~~l~~~l~~~~ 450 (453)
T 4ffc_A 423 RLLPPLVIGDDLLDEGITALSDIIRAKA 450 (453)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999997653
No 13
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=100.00 E-value=1.1e-62 Score=517.21 Aligned_cols=412 Identities=33% Similarity=0.638 Sum_probs=351.0
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++|+|+|+||.||++||||.+|+|+++|||+||+|++|+.++++++.+ +. ..++++...+++++|++.++ .+
T Consensus 31 ~p~~~~~~~G~~v~d~~g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~-~~-~~~~~~~~~~la~~l~~~~~-~~ 107 (452)
T 3n5m_A 31 STTVGAKAEGCWVEDIQGKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSY-FP-MSQSHEPAIKLAEKLNEWLG-GE 107 (452)
T ss_dssp GCCEEEEEEBTEEEETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCCC-CC-TTSEEHHHHHHHHHHHHHHT-SC
T ss_pred CCceEEEeeeCEEEECCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcCC-cc-cccCCHHHHHHHHHHHHhCC-CC
Confidence 78999999999999999999999999999999999999999999999988655 22 23467788999999999974 34
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
.+ |+|++||+||++.|+++++.|+..++.+++++||+++++|||++.+++++++.+.++..+.+..+.+.+++.|+.++
T Consensus 108 ~~-v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (452)
T 3n5m_A 108 YV-IFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYR 186 (452)
T ss_dssp EE-EEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTT
T ss_pred ce-EEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCcccc
Confidence 45 99999999999999999998876666567889999999999999999999998887777776666677777777777
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 320 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv-~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~ 320 (514)
+++.. +.+.+...++++|++++.+.+++++++|++||+ +| +|+++|+++||++|+++|++||++||+||||+||||+
T Consensus 187 ~~~~~-~~~~~~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~ 264 (452)
T 3n5m_A 187 MPGIE-RENIYDVECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRT 264 (452)
T ss_dssp STTTT-TSCGGGCHHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT
T ss_pred CccCC-chhhHHHHHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcc
Confidence 65432 223344456788999887555568999999999 89 9999999999999999999999999999999999999
Q ss_pred cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250 321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI 400 (514)
Q Consensus 321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~ 400 (514)
|++++++++++.||++||||++++|++|+|++++++++++.+.... ..+.+.+++|+++||+++++++++|+.++++++
T Consensus 265 g~~~~~~~~~~~~di~t~sK~l~~G~~~ig~~~~~~~i~~~~~~~~-~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 343 (452)
T 3n5m_A 265 GKAFGFMNYDVKPDIITMAKGITSAYLPLSATAVKREIYEAFKGKG-EYEFFRHINTFGGNPAACALALKNLEIIENENL 343 (452)
T ss_dssp SSSSGGGGTTCCCSEEEECGGGGTTSSCCEEEEEEHHHHGGGCSSS-TTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTH
T ss_pred cccchhhhcCCCCCEEeecccccCCCcceEEEEECHHHHHHHhhcc-CCCCccccCCCCCCHHHHHHHHHHHHHHHhccH
Confidence 9998999999999999999999998789999999999999885310 123566889999999999999999999988889
Q ss_pred HHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC------
Q 010250 401 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG------ 473 (514)
Q Consensus 401 ~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g------ 473 (514)
.++++++++++++.|+++ .+++.+..+++.|+++++++.....+..+++ ......+.+.|+++||++.+.+
T Consensus 344 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~--~~~~~~~~~~l~~~Gv~~~~~~~~~~~~ 421 (452)
T 3n5m_A 344 IERSAQMGSLLLEQLKEEIGEHPLVGDIRGKGLLVGIELVNDKETKEPID--NDKIASVVNACKEKGLIIGRNGMTTAGY 421 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSSCEEEEEEEETTTTEECC--HHHHHHHHHHHHHTTEECEECTTSSTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEEEEecCCcccCCCC--HHHHHHHHHHHHHCCcEEeecCcccCCC
Confidence 999999999999999987 6778889999999999999865432222221 1124568889999999999875
Q ss_pred -CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 474 -DNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 474 -~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
+.|||+||+.+|+++|++++++|++++++
T Consensus 422 ~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 422 NNILTLAPPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 67999999999999999999999998753
No 14
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=100.00 E-value=8.4e-59 Score=484.53 Aligned_cols=412 Identities=31% Similarity=0.547 Sum_probs=325.4
Q ss_pred ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250 68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 147 (514)
Q Consensus 68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ 147 (514)
+|+|| ...|+++.+++|+++||.||++||||.+++++++|||+||+|++|+.++++++.+++.. .++.+...
T Consensus 4 ~~~~~-------~~~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-~~~~~~~~ 75 (430)
T 3i4j_A 4 VFYRS-------SKPYPVAVRGEGVFLYDDAGRRYLDGSSGALVANIGHGRAEVGERMAAQAARLPFVHGS-QFSSDVLE 75 (430)
T ss_dssp BCCSS-------SSCCCEEEEEEBTEEEETTSCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTT-TCEEHHHH
T ss_pred cccCC-------CCCCceEEeeecCEEEECCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhccccccc-ccCCHHHH
Confidence 46676 23789999999999999999999999999999999999999999999999886654432 34667888
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250 148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 227 (514)
Q Consensus 148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~ 227 (514)
+++++|++.++ .+.++|+|++||+||++.|+++++.++...+.+++++||+++++|||.+..+.++++.+.++..+...
T Consensus 76 ~l~~~la~~~~-~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 154 (430)
T 3i4j_A 76 EYAGRLARFVG-LPTFRFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPL 154 (430)
T ss_dssp HHHHHHHHHTT-CTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC------------------------
T ss_pred HHHHHHHHhCC-CCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCc
Confidence 99999999874 45789999999999999999999988777777788999999999999999988888876666555544
Q ss_pred CC--cccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccC-CCCcccCChhHHHHHHHHHHhc
Q 010250 228 AP--FVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIG-AGGVIPPPATYFEKVQAVVKKY 304 (514)
Q Consensus 228 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~-~~G~~~p~~~~L~~l~~l~~~~ 304 (514)
.+ .+..++.++.|+. ...++++|++++.+.+++++++|++||++| ++|+++++++||++|+++|++|
T Consensus 155 ~~~~~~~~~~~~~~~~~----------~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~ 224 (430)
T 3i4j_A 155 MRPEAWPKLPKPDPARN----------GAEDAEGLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEA 224 (430)
T ss_dssp -CGGGSCEECCCCTTSC----------HHHHHTHHHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHH
T ss_pred CCCCCceEcCCCcccch----------hhHHHHHHHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHc
Confidence 44 4555565554442 345678899988765556899999999999 9999999999999999999999
Q ss_pred CCEEEEechhcCcccccccceeccc-CCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHH
Q 010250 305 DILFIADEVICAFGRLGTMFGCDKY-SIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPV 383 (514)
Q Consensus 305 gillI~DEv~tG~gr~G~~~~~~~~-gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl 383 (514)
|++||+||||+||||+|++++++++ ++.||++||||++++|++|+|++++++++++.+.... +.+.+++||++||+
T Consensus 225 ~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t~sK~l~~G~~r~G~~~~~~~i~~~~~~~~---~~~~~~~t~~~~~~ 301 (430)
T 3i4j_A 225 GIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAVLGKGLAAGYAPLAGLLAAPQVYETVMGGS---GAFMHGFTYAGHPV 301 (430)
T ss_dssp TCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEEECGGGTTTSSCCEEEEECHHHHHHHHHTT---CBCCCCCTTTTCHH
T ss_pred CCEEEEechhhCCCcccchhhhhhhcCCCCcEEEEcccccCCccccEEEEECHHHHHHHhccC---CcccccCCCCCCHH
Confidence 9999999999999999998889999 9999999999999988789999999999999987531 23567889999999
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH
Q 010250 384 SCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC 462 (514)
Q Consensus 384 ~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 462 (514)
++++++++|+.++++++.++++++++++++.|+++ .+++.+..+++.|+++++++.+.. ...++.. ......+.+.|
T Consensus 302 ~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~l 379 (430)
T 3i4j_A 302 SVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQVRGTGLLLGVVLGDLA-TGQAFET-PGIASRIGAAA 379 (430)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEC--------------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEecccc-ccCCCcc-HHHHHHHHHHH
Confidence 99999999999888889999999999999999987 467888899999999999986322 1111100 01145688999
Q ss_pred HHCCcEEEee--------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 463 EKHGMLVRVS--------GDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 463 ~~~Gv~~~~~--------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+++||++.+. ++.+||+|++.+|+++|++++++|+++++++
T Consensus 380 ~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 380 LKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALLAGALEDV 428 (430)
T ss_dssp HHTTEECC-----------CEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 9999999876 4679999999999999999999999998754
No 15
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=100.00 E-value=3.3e-58 Score=480.52 Aligned_cols=382 Identities=30% Similarity=0.485 Sum_probs=303.5
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++.+++|+++||.||++||||.+|+++++|||+||+|++|+.++++++.+++. ..+.+...+++++|++++ +
T Consensus 47 ~~~~~~~~~g~~~~d~~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~~~~--~~~~~~~~~l~~~la~~~---g 121 (433)
T 1z7d_A 47 IPVVLKRAKGVFVYDVNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICSR--AFFSVPLGICERYLTNLL---G 121 (433)
T ss_dssp EEEEEEEEEBTEEEETTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCCT--TSEEHHHHHHHHHHHHHH---T
T ss_pred CCceEEeeecCEEEECCCCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCCCccC--CcCCHHHHHHHHHHHhhc---C
Confidence 68899999999999999999999999999999999999999999999988654332 225667889999999997 3
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHh-hc-CCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNN-AL-GRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 239 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~-~~-~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 239 (514)
.++|+|++||+||++.|+++++.|.. .. ..+++++||+++++|||++..++++++.+.++.++.+..+.+..++.+
T Consensus 122 ~~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~-- 199 (433)
T 1z7d_A 122 YDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYD-- 199 (433)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECTT--
T ss_pred CCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCCC--
Confidence 68999999999999999999876531 11 234568999999999999988888777655554444332333222221
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250 240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319 (514)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr 319 (514)
++++|++++. .+++++|++||+++++|++++++++|++|+++|++||++||+||||+||||
T Consensus 200 ----------------d~~~le~~l~---~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~ 260 (433)
T 1z7d_A 200 ----------------DLEALEEELK---DPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGR 260 (433)
T ss_dssp ----------------CHHHHHHHHT---STTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTT
T ss_pred ----------------CHHHHHHHhC---CCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCc
Confidence 2577888774 256899999999999999999999999999999999999999999999999
Q ss_pred ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 399 (514)
Q Consensus 320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~ 399 (514)
+|.+++++++++.||+++|||++++|++|+|++++++++++.+.. ..+++||++||++++++.++|+.+++++
T Consensus 261 ~g~~~~~~~~~~~~di~t~sK~l~~G~~~~G~v~~~~~~~~~l~~-------~~~~~t~~~~~~~~aaa~aal~~~~~~~ 333 (433)
T 1z7d_A 261 TGKLLCVHHYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIKP-------GEHGSTYGGNPLAASICVEALNVLINEK 333 (433)
T ss_dssp TSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTCCT-------TCCCCTTTTCHHHHHHHHHHHHHHHHTT
T ss_pred CCcchhhHhcCCCCCEEEECccccCCCCCeEEEEECHHHHhhhcc-------ccccccCCCCHHHHHHHHHHHHHHHhcc
Confidence 999888899999999999999999876899999999999887752 2477899999999999999999998778
Q ss_pred HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCEEE
Q 010250 400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIM 477 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~iR 477 (514)
+.++++++++++++.|+++ .+++.+..+++.|+++++++.+.. . ....+.+.|+++||++.+. ++.||
T Consensus 334 ~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~g~~~~i~~~~~~--~--------~~~~~~~~l~~~Gv~v~~~~~~~iR 403 (433)
T 1z7d_A 334 LCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNEL--V--------NVLDICLKLKENGLITRDVHDKTIR 403 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECTTT--C--------CHHHHHHHHHHTTEECCEETTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeeeEEEEEEccCh--h--------HHHHHHHHHHHCCeEEecCCCCEEE
Confidence 9999999999999999987 467777888999999999986431 0 1456888999999999986 46799
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250 478 MSPPFIMSPEEVDELISKYGKALKATEER 506 (514)
Q Consensus 478 i~p~~~~t~e~id~~~~~l~~~l~~~~~~ 506 (514)
++||+.+|++||++++++|+++++++.++
T Consensus 404 i~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 432 (433)
T 1z7d_A 404 LTPPLCITKEQLDECTEIIVKTVKFFDER 432 (433)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHHHC--
T ss_pred EECCcCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999998776543
No 16
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=100.00 E-value=4.2e-58 Score=482.01 Aligned_cols=429 Identities=32% Similarity=0.531 Sum_probs=349.6
Q ss_pred ccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCch
Q 010250 66 HDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKP 145 (514)
Q Consensus 66 ~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~ 145 (514)
...|+|++...... ..|+++.+++|+++||.||++||||.+++|++++||+||+|++|+.++++++. ++.+..++.+.
T Consensus 17 ~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~ 94 (449)
T 3a8u_X 17 DAHWMPYTANRNFL-RDPRLIVAAEGSWLVDDKGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLD-YSPGFQYGHPL 94 (449)
T ss_dssp GGSCCTTSCHHHHH-HSCCCEEEEEBTEEEETTCCEEEETTHHHHTCTTCBSCHHHHHHHHHHTTTCS-CCCSSSCCCHH
T ss_pred cccccccccccccc-CCCceEEeeecCEEEECCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhCC-CccccccCCHH
Confidence 34678877642111 25889999999999999999999999999999999999999999999998764 22222446677
Q ss_pred HHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCC
Q 010250 146 SLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFD 225 (514)
Q Consensus 146 ~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~ 225 (514)
..+++++|+++++ .+.++|+|++||+||++.|+++++.|+...+.+++++||+++++|||.+..++.+++.+.++..++
T Consensus 95 ~~~l~~~la~~~~-~~~~~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~ 173 (449)
T 3a8u_X 95 SFQLAEKITDLTP-GNLNHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFG 173 (449)
T ss_dssp HHHHHHHHHTTSS-TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTC
T ss_pred HHHHHHHHHHhCC-CCCCEEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccC
Confidence 8899999999874 467899999999999999999998877666666778999999999999988888877766666666
Q ss_pred CCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC
Q 010250 226 LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD 305 (514)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~g 305 (514)
+..+.+..+++|..|+.++.+.+.+.+...++++|++++.+..++++++|++||+++++|++.|+++|+++|+++|++||
T Consensus 174 ~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~ 253 (449)
T 3a8u_X 174 QPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHN 253 (449)
T ss_dssp CCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHT
T ss_pred CCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhC
Confidence 55556666666655553321222233455567889988876543578999999999999999999999999999999999
Q ss_pred CEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccC--CCCcccccCCCCCcHH
Q 010250 306 ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSN--TLGSFSHGFTYSGHPV 383 (514)
Q Consensus 306 illI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~--~~~~~~~~~t~~~~pl 383 (514)
++||+||||+||||+|..+.++++++.||++++||++++|++|+|++++++++++.+..... ....+.+++|+++||+
T Consensus 254 ~~li~Dev~~~~g~~g~~~~~~~~~~~~di~s~sK~l~~G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~ 333 (449)
T 3a8u_X 254 ILLVFDEVITGFGRTGSMFGADSFGVTPDLMCIAKQVTNGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPV 333 (449)
T ss_dssp CEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCCCCTTTTCHH
T ss_pred CEEEEeccccCccccCcchhhhhcCCCCCEEEEcccccCCCCceEEEEECHHHHHHhhccCcccccccccccCCCcccHH
Confidence 99999999999999998778888999999999999999887899999999999998875211 1123356789999999
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH
Q 010250 384 SCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE 463 (514)
Q Consensus 384 ~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 463 (514)
+++++.++|+.++++++.++++++++++++.|+++.+++.+..+++.|+++++++....... ......+.+.|+
T Consensus 334 ~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~------~~~~~~~~~~l~ 407 (449)
T 3a8u_X 334 ACAAGLAALCLLQKENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDA------IVRPFEAGMALW 407 (449)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTTBS------SHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCcccc------cccHHHHHHHHH
Confidence 99999999999887789999999999999999887556777778899999999986532110 001224778888
Q ss_pred HCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 464 KHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 464 ~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
++||++.+.++.|||+||+.+|+++|++++++|+++++++
T Consensus 408 ~~Gv~v~~~g~~iRis~~~~~t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 408 KAGFYVRFGGDTLQFGPTFNSKPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp HHTEECEEETTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred HCCcEEecCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 9999999988889999999999999999999999988653
No 17
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=100.00 E-value=1e-56 Score=470.03 Aligned_cols=378 Identities=28% Similarity=0.461 Sum_probs=318.4
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++.+++|+++||.||++||||.+|+++++|||+||+|++|+.++++++.+++.. .+.+...+++++|++++ +
T Consensus 58 ~~~~~~~~~G~~~~d~~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~~~~--~~~~~~~~l~~~la~~~---g 132 (439)
T 2oat_A 58 LPVALERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRA--FYNNVLGEYEEYITKLF---N 132 (439)
T ss_dssp CSCEEEEEEBTEEEETTCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCCCTT--SEESSHHHHHHHHHHHH---T
T ss_pred CCeeEEeeecCEEEECCCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCcccCc--cCCHHHHHHHHHHHHhc---C
Confidence 688999999999999999999999999999999999999999999999886544322 24567899999999987 3
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHh-hcC-CCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNN-ALG-RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 239 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~-~~~-~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 239 (514)
.++|+|++||+||++.|+++++.|.. ..+ .+++++||+++++|||++..++++++.+.++.++.+..+.+..++++
T Consensus 133 ~~~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~-- 210 (439)
T 2oat_A 133 YHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYN-- 210 (439)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECSS--
T ss_pred CCEEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCCC--
Confidence 68999999999999999999976532 111 34568999999999999988888777655555554333333333221
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250 240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319 (514)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr 319 (514)
++++|++++. .+++++|++||+++++|+++++++++++|+++|++||++||+||||+||||
T Consensus 211 ----------------d~~~le~~l~---~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~ 271 (439)
T 2oat_A 211 ----------------DLPALERALQ---DPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLAR 271 (439)
T ss_dssp ----------------CHHHHHHHTT---STTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTT
T ss_pred ----------------CHHHHHHHhC---CCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcc
Confidence 2577887774 247899999999999999999999999999999999999999999999999
Q ss_pred ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 399 (514)
Q Consensus 320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~ 399 (514)
+|++++++++++.||++++||++++|++|+|++++++++++.+.. ..+++||++||++++++.++|+.+++++
T Consensus 272 ~g~~~~~~~~~~~~Di~t~sK~l~~G~~~~G~v~~~~~~~~~l~~-------~~~~~t~~~~~~~~aaa~aal~~~~~~~ 344 (439)
T 2oat_A 272 TGRWLAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKP-------GEHGSTYGGNPLGCRVAIAALEVLEEEN 344 (439)
T ss_dssp TSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTSCT-------TSSCCSSTTCHHHHHHHHHHHHHHHHTT
T ss_pred CCcchhHHHhCCCCcEEEecccccCCCCCeEEEEECHHHHhccCC-------CCcccCCCcCHHHHHHHHHHHHHHhhhh
Confidence 999888899999999999999999886899999999999887752 2577899999999999999999998888
Q ss_pred HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCEEEE
Q 010250 400 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIMM 478 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~iRi 478 (514)
+.++++++++++++.|+++ .++.+..+++.|+++++++.+... . ....+.+.|+++||++.+. ++.|||
T Consensus 345 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~g~~~~v~l~~~~~-~--------~~~~l~~~l~~~Gv~v~~~~~~~iRi 414 (439)
T 2oat_A 345 LAENADKLGIILRNELMKL-PSDVVTAVRGKGLLNAIVIKETKD-W--------DAWKVCLRLRDNGLLAKPTHGDIIRF 414 (439)
T ss_dssp HHHHHHHHHHHHHHHHTTS-CTTTEEEEEEETTEEEEEECCCSS-C--------CHHHHHHHHHHTTEECCBSSSSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHh-cCCCcEEEEeeeeEEEEEEecCcc-H--------HHHHHHHHHHHCCeEEecCCCCEEEE
Confidence 9999999999999999987 567777889999999999864310 0 1456888999999999986 467999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 479 SPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 479 ~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
+||+.+|++||++++++|++++++
T Consensus 415 ~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 415 APPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred ECccCCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998753
No 18
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=4.5e-56 Score=464.48 Aligned_cols=393 Identities=23% Similarity=0.333 Sum_probs=314.2
Q ss_pred CCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC
Q 010250 81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 160 (514)
Q Consensus 81 ~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~ 160 (514)
..|+++++++|+++||.|||+||||.+++|+++|||+||+|++|+.+++++... ++.+.+...+|+++|++.++
T Consensus 36 ~~p~~~~~~~G~~~~d~~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~----~~~~~~~~~~l~~~la~~~~-- 109 (434)
T 3l44_A 36 GAPIAMERGKGAYFWDVDGNKYIDYLAAYGPIITGHAHPHITKAITTAAENGVL----YGTPTALEVKFAKMLKEAMP-- 109 (434)
T ss_dssp SCCCCEEEEEBTEEEETTCCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSC----CSSCCHHHHHHHHHHHHHCT--
T ss_pred CCCceEEEeecCEEEECCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcC----CCCCCHHHHHHHHHHHHhCC--
Confidence 478999999999999999999999999999999999999999999999987532 13467788999999999975
Q ss_pred CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcc
Q 010250 161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW 240 (514)
Q Consensus 161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
+.++|+|++||+||++.|+++++.+ +++++||+++++|||++..++..++.+....... ..+.+.....+...
T Consensus 110 ~~~~v~~~~sGsea~~~ai~~a~~~------~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~ 182 (434)
T 3l44_A 110 ALDKVRFVNSGTEAVMTTIRVARAY------TGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTP-DSAGVPQSIAQEVI 182 (434)
T ss_dssp TCSEEEEESSHHHHHHHHHHHHHHH------HCCCEEEEETTCCCCSSGGGGBC-------CCCB-SSTTCCHHHHTTEE
T ss_pred CCCEEEEeCchHHHHHHHHHHHHHh------hCCCEEEEEcCccCCCcHHHHhhcCCcccccCCC-CcCCCCCcCCCceE
Confidence 5789999999999999999999876 4678999999999999988887776543211110 00000000000000
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 320 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~ 320 (514)
..+ ++++++|++++.+. ++++++|++||+++++|+++|+++||++|+++|++||++||+||||+|| |+
T Consensus 183 ~~~----------~~d~~~le~~l~~~-~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~ 250 (434)
T 3l44_A 183 TVP----------FNNVETLKEALDKW-GHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RF 250 (434)
T ss_dssp EEC----------TTCHHHHHHHHHHH-GGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TS
T ss_pred ecC----------cccHHHHHHHHHhC-CCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-ec
Confidence 111 11357888888654 2579999999999999999999999999999999999999999999999 99
Q ss_pred cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250 321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI 400 (514)
Q Consensus 321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~ 400 (514)
|..++++++++.||++||||++++| +|+|++++++++++.+... +.+.+++||++||+++++++++|+.++++++
T Consensus 251 g~~~~~~~~~~~~di~t~sK~~~~G-~~iG~~~~~~~i~~~~~~~----~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~ 325 (434)
T 3l44_A 251 MYGGAQDLLGVTPDLTALGKVIGGG-LPIGAYGGKKEIMEQVAPL----GPAYQAGTMAGNPASMASGIACLEVLQQEGL 325 (434)
T ss_dssp SSSCHHHHHTCCCSEEEEEGGGGTT-SSCEEEEECHHHHTTBTTT----SSBCCCCTTTTCHHHHHHHHHHHHHHTSTTH
T ss_pred cccHHHHHcCCCCCeeehhhhhcCC-cCeeeEEEcHHHHHhhccC----CCcccCCCCCcCHHHHHHHHHHHHHHHcccH
Confidence 9988899999999999999999987 8999999999999888632 2356788999999999999999999988889
Q ss_pred HHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCC--CCCccchHHHHHHHHHHCCcEEEeeC-CEE
Q 010250 401 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEP--FPPEWGIGAYFGAQCEKHGMLVRVSG-DNI 476 (514)
Q Consensus 401 ~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~i 476 (514)
.++++++++++++.|+++ ..++.+..+++.|+++++++.+....... ..........+.+.|+++||++++.+ ..+
T Consensus 326 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~ 405 (434)
T 3l44_A 326 YEKLDELGATLEKGILEQAAKHNIDITLNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAPSKYEAW 405 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCSSTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCEEEEeeccEEEEEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEeecCCCcE
Confidence 999999999999999987 45677778999999999998643211000 00011124568889999999999876 458
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 477 MMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 477 Ri~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
|++ +.+|++||++++++|+++++++.+
T Consensus 406 rl~--~~~t~e~i~~~l~~l~~~l~~~~~ 432 (434)
T 3l44_A 406 FLT--TEHTKEDIEYTIEAVGRAFAALAD 432 (434)
T ss_dssp ECC--TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEe--cccCHHHHHHHHHHHHHHHHHHHh
Confidence 885 899999999999999999987643
No 19
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=100.00 E-value=8.8e-56 Score=461.65 Aligned_cols=411 Identities=22% Similarity=0.331 Sum_probs=311.5
Q ss_pred cccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcccc
Q 010250 58 STTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS 137 (514)
Q Consensus 58 ~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~ 137 (514)
+..+++.+...++|++. +......|+++++++|+++||.|||+||||.+++++++|||+||+|++|+.++++++..+
T Consensus 12 ~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~G~~~~d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~-- 88 (429)
T 4e77_A 12 AQAQQLIPGGVNSPVRA-FTGVGGIPLFIERADGAYLFDVDGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSF-- 88 (429)
T ss_dssp HHHHHHSGGGCSSGGGG-TTTTCSCCCCEEEEEBTEEEETTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCC--
T ss_pred HHHHhhcCCCcCccccc-ccccCCCCceEEEeecCEEEECCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCccc--
Confidence 33444544444444332 222234789999999999999999999999999999999999999999999999875422
Q ss_pred ccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC
Q 010250 138 FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL 217 (514)
Q Consensus 138 ~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~ 217 (514)
+.+.+...+++++|++.++ +.++++|+|||+||++.|+++++.+ +++.+||+++++|||.+...+..++.
T Consensus 89 --~~~~~~~~~la~~l~~~~~--~~~~v~~~~sGsea~~~al~~a~~~------~~~~~ii~~~~~yhg~~~~~~~~~~~ 158 (429)
T 4e77_A 89 --GAPTEMEVKMAQLVTDLVP--TMDMVRMVNSGTEATMSAIRLARGY------TGRDKIIKFEGCYHGHADCLLVKAGS 158 (429)
T ss_dssp --SSCCHHHHHHHHHHHHHST--TCSEEEEESSHHHHHHHHHHHHHHH------HCCCEEEEETTCCCC-----------
T ss_pred --CCCCHHHHHHHHHHHhhCC--CCCEEEEeCcHHHHHHHHHHHHHHh------hCCCEEEEEcCccCCCChhhhhhcCC
Confidence 3467888999999999975 5789999999999999999999876 45789999999999998866655443
Q ss_pred ccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHH
Q 010250 218 PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKV 297 (514)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l 297 (514)
....... +..+.+.....+...+.+ ++++++|++++.+. ++++++|++||+++++|++.++++||++|
T Consensus 159 ~~~~~~~-~~~~~~~~~~~~~~~~~~----------~~d~~~le~~l~~~-~~~~~~vi~ep~~~~~g~~~~~~~~l~~l 226 (429)
T 4e77_A 159 GALTLGQ-PNSPGVPTDFAKHTLTCT----------YNDLASVRQAFEQY-PQEVACIIVEPVAGNMNCIPPLPEFLPGL 226 (429)
T ss_dssp --------CCCTTSCGGGGTTEEEEC----------TTCHHHHHHHHHHS-TTTEEEEEECSSBCTTSCBCCCTTHHHHH
T ss_pred cccccCC-CCcCCCCCccCCceeecC----------CCCHHHHHHHHHhc-CCCEEEEEECCccCCCCCcCCCHHHHHHH
Confidence 2211100 000111000000111111 11367888888653 35799999999999999999999999999
Q ss_pred HHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCC
Q 010250 298 QAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 377 (514)
Q Consensus 298 ~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t 377 (514)
+++|++||++||+||||+|| |+|..++.+++++.||+++|||++++| +|+|++++++++++.+... +...+++|
T Consensus 227 ~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~~pdi~t~sK~~~~G-~~~G~~~~~~~~~~~l~~~----~~~~~~~t 300 (429)
T 4e77_A 227 RALCDEFGALLIIDEVMTGF-RVALAGAQDYYHVIPDLTCLGKIIGGG-MPVGAFGGRREVMNALAPT----GPVYQAGT 300 (429)
T ss_dssp HHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTCCCSEEEEEGGGGTT-SCCEEEEECHHHHTTBTTT----SSBCC--C
T ss_pred HHHHHHcCCEEEEeccccCc-ccCcchHHHhcCCCCCeeeecccccCC-CCeEEEEECHHHHHHhccC----CCccccCC
Confidence 99999999999999999999 999988899999999999999999987 8999999999999888642 23457889
Q ss_pred CCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCC----CCcc
Q 010250 378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPF----PPEW 452 (514)
Q Consensus 378 ~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~----~~~~ 452 (514)
|++||++++++.++|+.++++++.++++++++++++.|+++ ..++.+..+++.|+++++++.+.... .++ ..+.
T Consensus 301 ~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~ 379 (429)
T 4e77_A 301 LSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEENIPLVVNHVGGMFGLFFTNADTV-TCYQDVMNCDV 379 (429)
T ss_dssp CCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEECCSSSCC-CSHHHHHTSCH
T ss_pred CCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeEEEEEEccCccc-ccccccccccH
Confidence 99999999999999999987889999999999999999886 45677778999999999998754210 000 0011
Q ss_pred chHHHHHHHHHHCCcEEEeeCC-EEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 453 GIGAYFGAQCEKHGMLVRVSGD-NIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 453 ~~~~~~~~~l~~~Gv~~~~~g~-~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
.....+.+.|+++||++.+.+. .+|+ ++.+|++||++++++|++++++
T Consensus 380 ~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 380 ERFKRFFHLMLEEGVYLAPSAFEAGFM--SLAHSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp HHHHHHHHHHHHTTEECCSSTTSCEEC--CTTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCeEEeecCCCCEEE--eccCCHHHHHHHHHHHHHHHHh
Confidence 1246788899999999998763 4554 5899999999999999998753
No 20
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=100.00 E-value=2.6e-55 Score=452.80 Aligned_cols=374 Identities=31% Similarity=0.513 Sum_probs=321.2
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++.+++|+++||.||++||||.+++++++|||+||+|++|+.++++++.+++. ..+.+...+++++|++.++
T Consensus 18 ~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~l~~~la~~~~--- 92 (395)
T 3nx3_A 18 FDIVLEKGQGVYLFDDKAKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLHTSN--LYYNENIAAAAKNLAKASA--- 92 (395)
T ss_dssp CSCBEEEEEBTEEEETTCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCSCCCT--TSBCHHHHHHHHHHHHHHT---
T ss_pred CCceEEeeeeeEEEECCCCEEEECCCcHHhccCCCCCHHHHHHHHHHHHhcccccc--ccCCHHHHHHHHHHHHhcC---
Confidence 78899999999999999999999999999999999999999999999987654432 2356788999999999873
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
.++++|++||+||++.|+++++.+....+ +++++||+++++|||.+..+.++++.+.++..+.+....+..++.+
T Consensus 93 ~~~v~~~~gg~ea~~~al~~~~~~~~~~g-~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 167 (395)
T 3nx3_A 93 LERVFFTNSGTESIEGAMKTARKYAFNKG-VKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYN---- 167 (395)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHHHTT-CTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTT----
T ss_pred CCeEEEeCCHHHHHHHHHHHHHHHhhccC-CCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCC----
Confidence 57999999999999999999987765554 4578999999999999999988888766655444333333333221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G 321 (514)
++++|++++. +++++|++||+++++|.++|+++++++|+++|++||++||+||||+||||+|
T Consensus 168 --------------d~~~l~~~l~----~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g 229 (395)
T 3nx3_A 168 --------------DISSVEKLVN----EKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSG 229 (395)
T ss_dssp --------------CHHHHHTTCC----TTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS
T ss_pred --------------CHHHHHHhcc----CCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCC
Confidence 1466766653 5789999999999999999999999999999999999999999999999999
Q ss_pred ccceecccCCCCchhchhhhhcCCcccceeEEeCHHH-HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEV-SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI 400 (514)
Q Consensus 322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i-~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~ 400 (514)
..++.+++++.||++++||++++| +|+|++++++++ ++.+.+ ..+++|+++||++++++.++|+.++++++
T Consensus 230 ~~~~~~~~~~~~d~~t~sK~~~~G-~~~G~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~aa~aal~~~~~~~~ 301 (395)
T 3nx3_A 230 KFFAYEHAQILPDIMTSAKALGCG-LSVGAFVINQKVASNSLEA-------GDHGSTYGGNPLVCAGVNAVFEIFKEEKI 301 (395)
T ss_dssp SSSGGGGGTCCCSEEEECGGGTTT-SCCEEEEECHHHHHHHSCT-------TCCSSCBSCCHHHHHHHHHHHHHHHHTTH
T ss_pred cchhHHhcCCCCCEEEecccccCC-CceEEEEEchhhhhhhcCC-------cccCCCCCCCHHHHHHHHHHHHHHHhhHH
Confidence 988889999999999999999987 799999999998 887752 35778999999999999999998887889
Q ss_pred HHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEE
Q 010250 401 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMM 478 (514)
Q Consensus 401 ~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi 478 (514)
.++++++++++++.|+++ ..++.+..+++.|+++++++.+.. ....+.+.|+++|+++.+.+ +.|||
T Consensus 302 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~~~~~l~~~Gi~v~~~~~~~iRi 370 (395)
T 3nx3_A 302 LENVNKLTPYLEQSLDELINEFDFCKKRKGLGFMQGLSLDKSV-----------KVAKVIQKCQENALLLISCGENDLRF 370 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTTS-----------CHHHHHHHHHHTTEECEEETTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeEEEEeEEEEEEEEeCCcc-----------hHHHHHHHHHHCCCEEecCCCCEEEE
Confidence 999999999999999886 456788889999999999986531 14568889999999999874 67999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 479 SPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 479 ~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
+|++.+|++|+++++++|++++++
T Consensus 371 ~~~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 371 LPPLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998753
No 21
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=100.00 E-value=3.5e-60 Score=495.65 Aligned_cols=412 Identities=20% Similarity=0.258 Sum_probs=327.7
Q ss_pred ccccccccccccccccccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHH
Q 010250 43 LARFYGTDASSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLV 122 (514)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~ 122 (514)
..|+......+++..+..+++.+..+..|++.. ..+|+++++++|+|+||+|||+||||++++++++|||+||+|+
T Consensus 47 ~~~~~~~~~~s~~l~~~~~~~~~~g~~~~~~~~----~~~p~~~~~~~G~~l~D~dG~~yiD~~~~~~~~~lGh~~p~V~ 122 (465)
T 2yky_A 47 RNTFARDNPVSAGHHERARRSMPGGNTRSILFH----RPFPLVIAQGTGSRFQDVDGHAYVNFLGEYTAGLFGHSHPVIR 122 (465)
Confidence 344543344455556666677666554454331 1369999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEec
Q 010250 123 AAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202 (514)
Q Consensus 123 ~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~ 202 (514)
+|+.+|++++.. +..+++...+|+++|+++++ +.++|+|+|||+||++.|+|+++.+ +++++||++++
T Consensus 123 ~Av~~q~~~~~~----~~~~~~~~~~Lae~L~~~~p--~~~~v~~~nSGseA~~~Aik~ar~~------tgr~~ii~~~~ 190 (465)
T 2yky_A 123 AAVERALAVGLN----LSTQTENEALFAEAVCDRFP--SIDLVRFTNSGTEANLMALATATAI------TGRKTVLAFDG 190 (465)
Confidence 999999987422 13366788999999999974 5689999999999999999999866 57889999999
Q ss_pred CCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccC
Q 010250 203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIG 282 (514)
Q Consensus 203 ~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~ 282 (514)
+|||++..++ ++ +. .. +.+. . .. .+.++++++|++++.+. ++++++|++||+++
T Consensus 191 ~yHG~~~~~~--sg-~~-~~--g~~~-~--~~----------------~~~~~d~~~l~~~l~~~-~~~~aavi~epv~~ 244 (465)
T 2yky_A 191 GYHGGLLNFA--SG-HA-PT--NAPY-H--VV----------------LGVYNDVEGTADLLKRH-GHDCAAILVEPMLG 244 (465)
Confidence 9999998777 33 11 10 1100 0 00 11224567888887643 35799999999999
Q ss_pred CCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHh
Q 010250 283 AGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVI 362 (514)
Q Consensus 283 ~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l 362 (514)
++|+++|+++||++|+++|++||++||+||||+ | |+|++++++++|+.||++||||++++| +|+|++++++++++.+
T Consensus 245 ~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~-r~g~~~a~~~~gv~pDi~t~sK~lg~G-~piG~v~~~~~i~~~l 321 (465)
T 2yky_A 245 AGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-S-RLSGGGAQEMLGISADLTTLGKYIGGG-MSFGAFGGRRDLMERF 321 (465)
Confidence 999999999999999999999999999999999 6 999988999999999999999999998 8999999999999988
Q ss_pred hhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccC
Q 010250 363 HSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADN 441 (514)
Q Consensus 363 ~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~ 441 (514)
.+. ..+.+.+++||++||++|++++++|+.++++++.+++++++++++++|+++ .+++++..+++.|+|++++|.+.
T Consensus 322 ~~~--~~g~~~~~~T~~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~ 399 (465)
T 2yky_A 322 DPA--RDGAFAHAGTFNNNILTMSAGHAALTQIYTRQAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRA 399 (465)
Confidence 641 012345788999999999999999999988889999999999999999987 45677788999999999998742
Q ss_pred CCCC--CCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 442 KSPN--EPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 442 ~~~~--~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
.... .....+......+.+.|+++||++.+.+... ||+.+|++||++++++|+++++++.
T Consensus 400 ~~~~~~~~~~~d~~~~~~~~~~ll~~GV~v~p~~~~~---~s~~~t~edid~~l~~l~~~l~~~~ 461 (465)
T 2yky_A 400 PIRSAGDVRAADQQLKELFFFHMLRKGIYLAPRGMYA---LSLEIADAGRDAFAEALADFIGEQR 461 (465)
Confidence 1100 0000011124568889999999998765322 7799999999999999999987764
No 22
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=100.00 E-value=1.9e-56 Score=471.84 Aligned_cols=393 Identities=21% Similarity=0.354 Sum_probs=302.5
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccc-ccccc--CCchHHHHHHHHHHhcC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYH-SFWNR--TTKPSLDLAKELLEMFT 158 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~-~~~~~--~~~~~~ela~~L~~~~~ 158 (514)
+|.++.+++|+|+||.|||+||||++|+++++|||+||+|++|+.+|+....+.+ +.++. ..+...+++++|+++++
T Consensus 45 ~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~l~~~~~ 124 (472)
T 1ohv_A 45 FFCNYEESRGNYLVDVDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLSVAP 124 (472)
T ss_dssp CCBCGGGCBBTEEEBTTSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTTSCBTTHHHHHHHTGGGGCC
T ss_pred CCceEEEEEcCEEEeCCCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHhCC
Confidence 5667899999999999999999999999999999999999999999875421111 11111 23344455555665553
Q ss_pred cCCCCeEEEeCChhHHHHHHHHHHHHHHhh--cC----------------CCC--ccEEEEEecCCcccceeeeecCCCc
Q 010250 159 ASKMAKVFFTNSGSEANDTQVKLVWYYNNA--LG----------------RPN--KKKFIARQKSYHGSTLIAASLSGLP 218 (514)
Q Consensus 159 ~~~~~~v~~~~sGseA~~~Alk~a~~~~~~--~~----------------~~~--~~~ii~~~~~yHG~t~~~~~~s~~~ 218 (514)
.+.++|+|+|||+|||+.|+|+++.|++. ++ .++ |++||+++++|||++.+++++++.+
T Consensus 125 -~~~~~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~ 203 (472)
T 1ohv_A 125 -KGMSQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSK 203 (472)
T ss_dssp -TTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSC
T ss_pred -CCcCEEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCc
Confidence 36789999999999999999999877531 11 134 5899999999999999999888865
Q ss_pred cccCCCCCCCCcccccCCCCcccCCCCCCC-h-hHHHHHHHHHHHHHHHHhCC--CcEEEEEEccccCCCCcccCChhHH
Q 010250 219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGET-E-EEYSTRLANNLEDLILKEGP--ETIAAFIAEPVIGAGGVIPPPATYF 294 (514)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~le~li~~~~~--~~~aavivEpv~~~~G~~~p~~~~L 294 (514)
.++.. +.+...+.++++|. ++++..... . +.+...++++|++++....+ .++++|++||+++++|+++|+++||
T Consensus 204 ~~~~~-~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l 281 (472)
T 1ohv_A 204 AIHKI-DIPSFDWPIAPFPR-LKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFF 281 (472)
T ss_dssp HHHHT-TSCCCCCCEECCCC-CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHH
T ss_pred ccccc-CCCCCCCcccCCCc-ccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHH
Confidence 43221 11212222333432 222111000 0 11223467888888875321 2799999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEechhcCcccccccceecccCCC--Cchhchhhh-hcCCcccceeEEeCHHHHHHhhhccCCCCc
Q 010250 295 EKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK--PDLVSFAKA-LSSAYMPIGAILVSPEVSEVIHSQSNTLGS 371 (514)
Q Consensus 295 ~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~--pDiv~~sK~-l~gG~~pig~v~~~~~i~~~l~~~~~~~~~ 371 (514)
++|+++|++||++||+||||+||||+|.+++++++|+. ||++||||+ |+|| ++ + ++++. .+ ..
T Consensus 282 ~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~sK~~l~GG-~~----~-~~~~~-~~-------~~ 347 (472)
T 1ohv_A 282 RKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKMMTGG-FF----H-KEEFR-PN-------AP 347 (472)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEEEECGGGSSEE-EE----E-CGGGS-CS-------SS
T ss_pred HHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEEEEccccccCC-cc----C-chhhc-cc-------cc
Confidence 99999999999999999999999999988889999987 999999999 6765 33 2 55542 11 24
Q ss_pred ccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCC-ceeEEEeeeeeEEEEEccCCCCCCCCC
Q 010250 372 FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFP 449 (514)
Q Consensus 372 ~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~ 449 (514)
+.+++|+++||+++++++++|+.++++++.+++++++++|+++|+++ .+++ .+..+++.|+|+++++.+.
T Consensus 348 ~~~~~T~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~g~~~~~~~~~~-------- 419 (472)
T 1ohv_A 348 YRIFNTWLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTFCSFDTPDE-------- 419 (472)
T ss_dssp SSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEETTEEEEECSSH--------
T ss_pred ccccCccCccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCCceEEEEEeCCh--------
Confidence 46788999999999999999999988889999999999999999987 3566 4778899999999977531
Q ss_pred CccchHHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 450 PEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 450 ~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
.....+...|+++||++.+.+ +.|||+|++.+|++||++++++|++++++
T Consensus 420 ---~~~~~~~~~l~~~Gv~~~~~g~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 470 (472)
T 1ohv_A 420 ---SIRNKLISIARNKGVMLGGCGDKSIRFRPTLVFRDHHAHLFLNIFSDILAD 470 (472)
T ss_dssp ---HHHHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred ---hHHHHHHHHHHHCCeEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 124568889999999999875 68999999999999999999999998864
No 23
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=100.00 E-value=3.6e-55 Score=458.29 Aligned_cols=395 Identities=23% Similarity=0.404 Sum_probs=322.0
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++++++|+++||.||++||||.++.++++|||+||+|++|+.++++++.+++ +..++.+...+++++|++.++ .+
T Consensus 25 ~~~~~~~~~G~~v~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~~l~~~la~~~~-~~ 102 (439)
T 3dxv_A 25 FPLAISGGRGARLIEENGRELIDLSGAWGAASLGYGHPAIVAAVSAAAANPAGAT-ILSASNAPAVTLAERLLASFP-GE 102 (439)
T ss_dssp SCCEEEEEEBTEEEETTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSCSCSC-SSSSEEHHHHHHHHHHHHTTT-CT
T ss_pred CCceEEEeeeCEEEeCCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCcc-ccccCCHHHHHHHHHHHHhCC-CC
Confidence 7889999999999999999999999999999999999999999999998865432 234567788999999999874 34
Q ss_pred C-CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcc--ccCCCCCCCCcccccCCCC
Q 010250 162 M-AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPA--LHQKFDLPAPFVLHTDCPH 238 (514)
Q Consensus 162 ~-~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~~ 238 (514)
. ++++|++||+||++.|+++++.+ .++++||+++++|||.+..++.+++.+. ++..+.+..+.+..+++++
T Consensus 103 ~~~~v~~~~ggsea~~~al~~~~~~------~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (439)
T 3dxv_A 103 GTHKIWFGHSGSDANEAAYRAIVKA------TGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRP 176 (439)
T ss_dssp TTEEEEEESSHHHHHHHHHHHHHHH------HSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSC
T ss_pred CCCEEEEeCCHHHHHHHHHHHHHHH------hCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCc
Confidence 5 79999999999999999998765 3567899999999999998888887655 5544443333333344433
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc
Q 010250 239 YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 318 (514)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g 318 (514)
.+.. ... ..++++|++++.+..++++++|++||+++++|.+.|+++|+++|+++|++||++||+||+|+|||
T Consensus 177 ~~~~----~~~----~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g 248 (439)
T 3dxv_A 177 YRND----PTG----DAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLA 248 (439)
T ss_dssp BTTB----TTS----HHHHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTT
T ss_pred cccc----ccH----HHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 2111 111 11578888888544456899999999999999999999999999999999999999999999999
Q ss_pred cccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc
Q 010250 319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER 398 (514)
Q Consensus 319 r~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~ 398 (514)
|+|..++.+++++.||+++|||++++| +|+|++++++++++.+.. ..+++|+ ++|+++++++++|+.++++
T Consensus 249 ~~g~~~~~~~~~~~~di~s~sK~~~~G-~riG~~~~~~~~~~~~~~-------~~~~~t~-~~~~~~~aa~aal~~~~~~ 319 (439)
T 3dxv_A 249 RSGRLHCFEHEGFVPDILVLGKGLGGG-LPLSAVIAPAEILDCASA-------FAMQTLH-GNPISAAAGLAVLETIDRD 319 (439)
T ss_dssp TTSSSSGGGGTTCCCSEEEECGGGGTT-SCCEEEEEEHHHHTSCSS-------SSCCTTT-TCHHHHHHHHHHHHHHHHT
T ss_pred cCchhhHHHhcCCCCCEEEEcchhcCC-cceEEEEECHHHHhhhcC-------CCcCCCc-ccHHHHHHHHHHHHHHHhc
Confidence 999988889999999999999999987 699999999999887763 2567899 9999999999999998888
Q ss_pred cHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---C
Q 010250 399 NIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---D 474 (514)
Q Consensus 399 ~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~ 474 (514)
++.++++++++++++.|+++ ..++.+..+++.|+++++++........+ .......+.+.|+++|+++.+.+ +
T Consensus 320 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~Gv~v~~~~~~~~ 396 (439)
T 3dxv_A 320 DLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLACGMELVCDRQSREP---ARAETAKLIYRAYQLGLVVYYVGMNGN 396 (439)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEEEETTTTEE---CHHHHHHHHHHHHHHTEECEEESTTSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCC---CHHHHHHHHHHHHHCCcEEeecCCCCC
Confidence 89999999999999999987 45788888999999999988643221111 11135668889999999999876 6
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 475 NIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 475 ~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
.+||+|++.+|+++|++++++|+++++++.
T Consensus 397 ~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 426 (439)
T 3dxv_A 397 VLEFTPPLTITETDIHKALDLLDRAFSELS 426 (439)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 799999999999999999999999998764
No 24
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=100.00 E-value=1.9e-55 Score=459.17 Aligned_cols=412 Identities=23% Similarity=0.327 Sum_probs=322.1
Q ss_pred cccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcccc
Q 010250 58 STTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS 137 (514)
Q Consensus 58 ~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~ 137 (514)
+..+++.+....++++. +......|+++++++|+++||.|||+||||.+++|+++|||+||+|++|+.++++++...
T Consensus 12 ~~~~~~~~~g~~~~~~~-~~~~~~~p~~~~~~~G~~~~d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~-- 88 (429)
T 3k28_A 12 EEAQDLMPGGVNSPVRA-FKSVGMNPLFMERGKGSKVYDIDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSF-- 88 (429)
T ss_dssp HHHTTTSGGGSSSGGGG-CGGGTCCCCCEEEEEBTEEEETTCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCC--
T ss_pred HHHHhhcCCCcCccccc-ccccCCCCceEEEeecCEEEECCCCEEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCc--
Confidence 33445555544333332 111134789999999999999999999999999999999999999999999999875431
Q ss_pred ccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC
Q 010250 138 FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL 217 (514)
Q Consensus 138 ~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~ 217 (514)
+.+++...+|+++|++.++ +.++++|++||+||++.|+++++.+ +++++||+++++|||++..++..++.
T Consensus 89 --~~~~~~~~~l~~~la~~~~--~~~~v~~~~~Gsea~~~ai~~a~~~------~~~~~vi~~~~~yhg~~~~~~~~~g~ 158 (429)
T 3k28_A 89 --GAPTEIENKLAKLVIERVP--SIEIVRMVNSGTEATMSALRLARGY------TGRNKILKFIGCYHGHGDSLLIKAGS 158 (429)
T ss_dssp --SSCCHHHHHHHHHHHHHST--TCSEEEEESSHHHHHHHHHHHHHHH------HTCCEEEEEETCCCCSCGGGCSSCCT
T ss_pred --CCCCHHHHHHHHHHHHhCC--CCCEEEEeCChHHHHHHHHHHHHHh------hCCCEEEEECCCcCCCcHHHHHhcCC
Confidence 3467788999999999974 5789999999999999999999876 46789999999999999888877765
Q ss_pred ccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHH
Q 010250 218 PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKV 297 (514)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l 297 (514)
+....... ..+.+.....+.... +.++++++|++++.+. ++++++|++||+++++|++.|+++||++|
T Consensus 159 ~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~d~~~le~~l~~~-~~~~~~vi~ep~~~~~G~~~~~~~~l~~l 226 (429)
T 3k28_A 159 GVATLGLP-DSPGVPEGVAKNTIT----------VAYNDLESVKYAFEQF-GDDIACVIVEPVAGNMGVVPPQPGFLEGL 226 (429)
T ss_dssp TC-----C-CCTTCCHHHHTTEEE----------EETTCHHHHHHHHHHH-GGGEEEEEECSSBCTTSCBCCCTTHHHHH
T ss_pred cccccCCC-CcCCCCCcccCceee----------cCCCCHHHHHHHHHhC-CCCEEEEEEcCCCCCCCcccCCHHHHHHH
Confidence 33211110 001000000000000 0011367888887653 35799999999999999999999999999
Q ss_pred HHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCC
Q 010250 298 QAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 377 (514)
Q Consensus 298 ~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t 377 (514)
+++|++||++||+||||+|| |+|.+++++++++.||++||||++++| +|+|++++++++++.+... +...+++|
T Consensus 227 ~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~~G-~~iG~~~~~~~~~~~~~~~----~~~~~~~t 300 (429)
T 3k28_A 227 REVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGVTPDLTCLGKVIGGG-LPVGAYGGKAEIMRQVAPS----GPIYQAGT 300 (429)
T ss_dssp HHHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTCCCSEEEECGGGGTT-SCCEEEEECHHHHTTBTTT----SSBCCCCT
T ss_pred HHHHHHcCCEEEEecccccc-ccCcchHHHHhCCCCceehhhhhhcCC-CCeEEEEEcHHHHhhhccC----CCccccCC
Confidence 99999999999999999999 999888889999999999999999887 8999999999999888632 23457889
Q ss_pred CCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCC--CCCccch
Q 010250 378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEP--FPPEWGI 454 (514)
Q Consensus 378 ~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~--~~~~~~~ 454 (514)
|++||+++++++++|+.++ +++.++++++++++++.|+++ ..++.+..+++.|+++++++.+....... ...+...
T Consensus 301 ~~~~~~a~aaa~aal~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (429)
T 3k28_A 301 LSGNPLAMAAGYETLVQLT-PESYVEFERKAEMLEAGLRKAAEKHGIPHHINRAGSMIGIFFTDEPVINYDAAKSSNLQF 379 (429)
T ss_dssp TTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHH
T ss_pred CCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEeeccEEEEEEecCCcccccccccccHHH
Confidence 9999999999999999776 678999999999999999987 45677888999999999998653211000 0011123
Q ss_pred HHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 455 GAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 455 ~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
...+.+.|+++||++.+.+ +.+|++ +.+|++++++++++|+++++++
T Consensus 380 ~~~~~~~l~~~Gv~v~~~~~~~~r~~--~~~t~e~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 380 FAAYYREMVEQGVFLPPSQFEGLFLS--TVHSDADIEATIAAAEIAMSKL 427 (429)
T ss_dssp HHHHHHHHHHTTEECCSSTTSCBCCC--TTCCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHCCeEEecCCCCCEEEE--CCCCHHHHHHHHHHHHHHHHHH
Confidence 4678889999999999865 458875 8999999999999999998654
No 25
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=100.00 E-value=2e-54 Score=451.83 Aligned_cols=402 Identities=26% Similarity=0.475 Sum_probs=326.9
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++.+++|+++||.||++||||.++.++.+|||+||+|++|+.++++++.+.+ .+++.+...+++++|+++++ .+
T Consensus 25 ~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~l~~~la~~~~-~~ 101 (433)
T 1zod_A 25 EPMIIERAKGSFVYDADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLF--SEMLSRPVVDLATRLANITP-PG 101 (433)
T ss_dssp CSSCCCEEEBTEEECTTCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCCCC--TTCCCHHHHHHHHHHHHHSC-TT
T ss_pred CCceEEEeecCEEEeCCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCcccc--cccCCHHHHHHHHHHHHhCC-CC
Confidence 5788999999999999999999999999999999999999999999998764322 24456778899999999874 35
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
.++|+|++||+||++.|+++++.+ +++++||+++++|||.+..++++++.+ +...+......+..++.|..++
T Consensus 102 ~~~v~~~~gg~ea~~~a~~~~~~~------~~~~~vi~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~ 174 (433)
T 1zod_A 102 LDRALLLSTGAESNEAAIRMAKLV------TGKYEIVGFAQSWHGMTGAAASATYSA-GRKGVGPAAVGSFAIPAPFTYR 174 (433)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHH------HTCCEEEEETTCCCCSSHHHHHTCCSS-CCSSSCCCCTTEEEECCCCTTS
T ss_pred cCEEEEeCchHHHHHHHHHHHHHh------hCCCeEEEECCCcCCCChhHHhhcCCc-cccccCCCCCCceEecCCcccc
Confidence 689999999999999999988755 346789999999999998888776654 2333433334455566655444
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G 321 (514)
.++.. +.+.+...++++|++++.+..++++++|++||+++++|+++|+++|+++|+++|++||++||+||||+||||+|
T Consensus 175 ~~~~~-~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g 253 (433)
T 1zod_A 175 PRFER-NGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTG 253 (433)
T ss_dssp CCCEE-TTEECHHHHHHHHHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS
T ss_pred cccCC-chhhhHHHHHHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCc
Confidence 33211 11122344578898888765445789999999999999999999999999999999999999999999999999
Q ss_pred ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV 401 (514)
Q Consensus 322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~ 401 (514)
..++++++++.||++++||++++| +|+|++++++++++.+... .+.+++|+++||++++++.++|+.++++++.
T Consensus 254 ~~~~~~~~~~~~di~s~sK~~~~G-~~ig~~~~~~~~~~~~~~~-----~~~~~~t~~~~~~~~~a~~aal~~~~~~~~~ 327 (433)
T 1zod_A 254 TMFACQRDGVTPDILTLSKTLGAG-LPLAAIVTSAAIEERAHEL-----GYLFYTTHVSDPLPAAVGLRVLDVVQRDGLV 327 (433)
T ss_dssp SSSTHHHHTCCCSEEEECHHHHTT-SSCEEEEECHHHHHHHHHT-----TCCCCCTTTTCHHHHHHHHHHHHHHHHTTHH
T ss_pred hHhHHhhcCCCCCEEEecccccCC-CCeeEEEEhHHHHHhhccC-----CCCCCCCCCcCHHHHHHHHHHHHHHHhCCHH
Confidence 877888889999999999999987 8999999999999988742 2345689999999999999999998888899
Q ss_pred HHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-----CE
Q 010250 402 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----DN 475 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-----~~ 475 (514)
++++++++++++.|+++ ..++.+..+++.|+++++++.+......+ .......+.+.|+++||++.+++ +.
T Consensus 328 ~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~---~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~ 404 (433)
T 1zod_A 328 ARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRTKEP---ADGLGAKITRECMNLGLSMNIVQLPGMGGV 404 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEEEETTTTEE---CTTHHHHHHHHHHHTTEECCEECCTTSCCE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCC---ChHHHHHHHHHHHHCCCeEeccCCCCCCCE
Confidence 99999999999999887 34677778899999999988642211000 01125568889999999998864 77
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 476 IMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 476 iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
|||+|++.+|+++|++++++|+++++++
T Consensus 405 lRi~~~~~~t~~~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 405 FRIAPPLTVSEDEIDLGLSLLGQAIERA 432 (433)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCcCCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999988654
No 26
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=100.00 E-value=1.1e-54 Score=452.92 Aligned_cols=391 Identities=20% Similarity=0.328 Sum_probs=315.5
Q ss_pred CCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC
Q 010250 81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 160 (514)
Q Consensus 81 ~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~ 160 (514)
..|+++++++|+++||.||++||||.+++|+++|||+||+|++|+.++++++.++ ..+.+...+++++|++.++
T Consensus 33 ~~p~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~----~~~~~~~~~la~~l~~~~~-- 106 (427)
T 3fq8_A 33 GQPIVFDRVKDAYAWDVDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSF----GAPCALENVLAEMVNDAVP-- 106 (427)
T ss_dssp SCCCCEEEEEBTEEEETTSCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCC----SSCCHHHHHHHHHHHHHST--
T ss_pred CCCceEEEeeeCEEEECCCCEEEECCCchhhhccCCCCHHHHHHHHHHHHhCCCc----CCCCHHHHHHHHHHHHhCC--
Confidence 4789999999999999999999999999999999999999999999999876432 2367788999999999975
Q ss_pred CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcc
Q 010250 161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW 240 (514)
Q Consensus 161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
+.++++|++||+||++.|+|+++.+ +++++||+++++|||++..+...++.+.....+. ..+.+.....++..
T Consensus 107 ~~~~v~~~~ggsea~~~al~~a~~~------~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 179 (427)
T 3fq8_A 107 SIEMVRFVNSGTEACMAVLRIMRAY------TGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLP-SSPGVPKKTTANTL 179 (427)
T ss_dssp TCSEEEEESSHHHHHHHHHHHHHHH------HCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCC-SCSSSCHHHHTTEE
T ss_pred CCCEEEEeCCHHHHHHHHHHHHHHh------hCCCEEEEECCCcCCCCHHHHHhcCCcccccCCC-CCCCCCCcccCcee
Confidence 5789999999999999999999877 4567999999999999888777766543211110 01111000000000
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 320 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~ 320 (514)
.. .++++++|++++.+. ++++++|++||+++++|++.++++||++|+++|++||++||+||||+|| |+
T Consensus 180 ~~----------~~~d~~~le~~l~~~-~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~ 247 (427)
T 3fq8_A 180 TT----------PYNDLEAVKALFAEN-PGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RI 247 (427)
T ss_dssp EE----------ETTCHHHHHHHHHHS-TTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TT
T ss_pred ec----------CCCCHHHHHHHHHhC-CCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-cc
Confidence 00 011367888888653 3579999999999999999999999999999999999999999999999 99
Q ss_pred cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250 321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI 400 (514)
Q Consensus 321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~ 400 (514)
|..++.+++++.||++++||++++| +|+|++++++++++.+... +.+.+++|+++||++++++.++|+.++++++
T Consensus 248 g~~~~~~~~~~~~di~t~sK~~~~G-~~~G~~~~~~~~~~~~~~~----~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~ 322 (427)
T 3fq8_A 248 AYGGVQEKFGVTPDLTTLGKIIGGG-LPVGAYGGKREIMQLVAPA----GPMYQAGTLSGNPLAMTAGIKTLELLRQPGT 322 (427)
T ss_dssp BTTHHHHHTTCCCSEEEECGGGGTT-SSCEEEEECHHHHTTBTTT----SSBCCCCTTTTCHHHHHHHHHHHHHHTSTTH
T ss_pred CcchhhHhcCCCCChhhhhhhhhCC-cceEEEEEcHHHHHhhccC----CCccccCCCCcCHHHHHHHHHHHHHHHhcCH
Confidence 9888889999999999999999987 8999999999999988642 2446788999999999999999999988889
Q ss_pred HHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCC-C-CCCccchHHHHHHHHHHCCcEEEeeCCEEE
Q 010250 401 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNE-P-FPPEWGIGAYFGAQCEKHGMLVRVSGDNIM 477 (514)
Q Consensus 401 ~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iR 477 (514)
.++++++++++++.|+++ ...+....+++.|+++++++.+...... . ...+......+.+.|+++||++.+.+. .|
T Consensus 323 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~-~r 401 (427)
T 3fq8_A 323 YEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQF-EA 401 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT-SC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHHHHCCcEEecCCC-CC
Confidence 999999999999999887 4556667789999999999865321100 0 001112345688899999999988764 26
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 478 MSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 478 i~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
+.+++.+|++||++++++|++++++
T Consensus 402 ~~~~~~~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 402 GFTSLAHTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEeeCcCCHHHHHHHHHHHHHHHHh
Confidence 6677999999999999999998864
No 27
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=100.00 E-value=1.8e-54 Score=450.61 Aligned_cols=378 Identities=29% Similarity=0.516 Sum_probs=316.2
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++.+++|+++||.||++||||.+++|++++||+||+|++|+.++++++.+++. ..+.+...+++++|++++ +
T Consensus 39 ~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~--~~~~~~~~~l~~~la~~~---g 113 (420)
T 2pb2_A 39 ADFIPVKGKGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWHTSN--VFTNEPALRLGRKLIDAT---F 113 (420)
T ss_dssp CCSCEEEEEBTEEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCCT--TSCCHHHHHHHHHHHHHS---S
T ss_pred CCceEEeeecCEEEECCCCEEEEccccccccccCCCCHHHHHHHHHHHHhcccccC--ccCCHHHHHHHHHHHhhC---C
Confidence 78899999999999999999999999999999999999999999999987654332 235677899999999987 3
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
.++|+|++||+||++.|+++++.|+...+.+++++||+++++|||.+..++..++.+.++.++.+..+.+..++.+
T Consensus 114 ~~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~---- 189 (420)
T 2pb2_A 114 AERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFN---- 189 (420)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECTT----
T ss_pred CCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecCC----
Confidence 5799999999999999999998766555556667999999999999988877777655444444333333333221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G 321 (514)
++++|++++. +++++|++||+++++|+++++++++++|+++|++||++||+||+|+||||+|
T Consensus 190 --------------d~~~le~~i~----~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g 251 (420)
T 2pb2_A 190 --------------DLHAVKAVMD----DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTG 251 (420)
T ss_dssp --------------CHHHHHHHCC----TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTS
T ss_pred --------------CHHHHHHHhc----cCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCC
Confidence 1567777664 4789999999999999888999999999999999999999999999999999
Q ss_pred ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV 401 (514)
Q Consensus 322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~ 401 (514)
+.++++.+++.||+++|||++++| +|+|++++++++++.+.. ..++.||++||++++++.++|+.++++++.
T Consensus 252 ~~~~~~~~~~~~diit~sK~l~~G-~~iG~~~~~~~l~~~l~~-------~~~~~t~~~~~~~~aa~~a~L~~~~~~~~~ 323 (420)
T 2pb2_A 252 DLFAYMHYGVTPDILTSAKALGGG-FPVSAMLTTQEIASAFHV-------GSHGSTYGGNPLACAVAGAAFDIINTPEVL 323 (420)
T ss_dssp SSSHHHHHTCCCSEEEECGGGGTT-SCCEEEEECHHHHTTCC-----------CCEECCCHHHHHHHHHHHHHHSSHHHH
T ss_pred cHHHHHhcCCCCCeEEecccccCC-CceEEEEEhHHHHHhhcC-------CCcCcccCcCHHHHHHHHHHHHHHHhccHH
Confidence 887778889999999999999987 799999999998877652 246788999999999999999998877889
Q ss_pred HHHHHHHHHHHhhhhhcc-CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEe
Q 010250 402 EQVNKIAPKFQDGVKAFS-DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMS 479 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l~-~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~ 479 (514)
++++++++++++.|+++. +++.+..+++.|+++++++...... ....+.+.|+++||++.+.+ +.|||+
T Consensus 324 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---------~~~~l~~~l~~~Gi~v~~~~~~~iRl~ 394 (420)
T 2pb2_A 324 QGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAELKPKYKG---------RARDFLYAGAEAGVMVLNAGADVMRFA 394 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECGGGTT---------CHHHHHHHHHHTTEECEESSTTEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEEEecceEEEEEECCCchH---------HHHHHHHHHHHCCCEEEeCCCCEEEEE
Confidence 999999999999998863 4567777889999999998642100 14568889999999999874 679999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 480 PPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 480 p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
||+.+|++|+++++++|+++++++
T Consensus 395 ~~~~~t~eei~~~~~~l~~~l~~~ 418 (420)
T 2pb2_A 395 PSLVVEEADIHEGMQRFAQAVGKV 418 (420)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998754
No 28
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=100.00 E-value=1.7e-54 Score=454.55 Aligned_cols=393 Identities=21% Similarity=0.338 Sum_probs=316.8
Q ss_pred eEEEeeeCcEEEe-CCCCEEEEccCCcccccCCCCCHHHH-H-HHHH---HHhcCCccccccccCCchHHHHHHHHHHhc
Q 010250 84 LVIEKSEGSYVYD-VNGKKYLDSLAGLWCTALGGSEPRLV-A-AATA---QLNTLPFYHSFWNRTTKPSLDLAKELLEMF 157 (514)
Q Consensus 84 ~~~~~~~G~~~~d-~dG~~ylD~~s~~~~~~lGh~~p~v~-~-A~~~---~l~~~~~~~~~~~~~~~~~~ela~~L~~~~ 157 (514)
+.+.+++|+++|| .||++||||.+++|+++|||+||+|+ + |+.+ +++++.+++. ..+++...+++++|++++
T Consensus 37 ~~~~~~~g~~~~d~~~g~~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~~~~~~~--~~~~~~~~~la~~la~~~ 114 (449)
T 2cjg_A 37 LDLTRSGGSYLVDAITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNS--DVYSVAMARFVETFARVL 114 (449)
T ss_dssp BCTTTCBBTEEEBTTTCCEEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTCCCCTT--TCCCHHHHHHHHHHHHHH
T ss_pred EEEeeeeeCEEEECCCCcEEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCCCc--ccCCHHHHHHHHHHHHhc
Confidence 3346999999999 99999999999999999999999999 9 9999 8887654332 236677899999999998
Q ss_pred CcCCCCeEEEeCChhHHHHHHHHHHHHHHhhc----C--CCCccEEEEEecCCcccceeeeecCCC-ccccCCCCCCCCc
Q 010250 158 TASKMAKVFFTNSGSEANDTQVKLVWYYNNAL----G--RPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDLPAPF 230 (514)
Q Consensus 158 ~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~----~--~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~~~~~~~~~~~ 230 (514)
+..+.++|+|++||+||++.|+++++.|...+ + .+++++||+++++|||++..++++++. +.++.++.+..+.
T Consensus 115 ~~~~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (449)
T 2cjg_A 115 GDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWP 194 (449)
T ss_dssp CCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCC
T ss_pred CCCCCCEEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCC
Confidence 53467899999999999999999998765311 1 123679999999999999998888876 4444445433333
Q ss_pred ccccCCCCcccCCCCCCChhH---HHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCE
Q 010250 231 VLHTDCPHYWRYAHPGETEEE---YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 307 (514)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gil 307 (514)
+..++.++. +..... ....++++|++++.+. .+++++|++||+++++|+++++++||++|+++|++||++
T Consensus 195 ~~~~~~~d~------~~~~~~~~~~~~~~~~~le~~i~~~-~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~l 267 (449)
T 2cjg_A 195 RIDAPYMRP------GLDEPAMAALEAEALRQARAAFETR-PHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDAL 267 (449)
T ss_dssp EECCCCCCT------TCCHHHHHHHHHHHHHHHHHHHHHS-TTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCE
T ss_pred cEEEcCCCc------hhhccccchhhHHHHHHHHHHHHhc-CCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcE
Confidence 333333320 011001 1234567788888643 357899999999999999999999999999999999999
Q ss_pred EEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHH
Q 010250 308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV 387 (514)
Q Consensus 308 lI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aa 387 (514)
||+||||+||||+|.+++++++++.||++++||++ |+|++++++++++.+.+. ......+++|+++||+++++
T Consensus 268 li~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l-----~iG~~~~~~~~~~~l~~~--~~~~~~~~~t~~~n~~~~~a 340 (449)
T 2cjg_A 268 LIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFGKKT-----QVCGVMAGRRVDEVADNV--FAVPSRLNSTWGGNLTDMVR 340 (449)
T ss_dssp EEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGG-----SSEEEEECGGGGGSTTCT--TTSTTSSCCSSSSCHHHHHH
T ss_pred EEEeccccCCCccCcceeecccCCCceEEEecCcc-----cEEEEEECHHHhhhhhhc--ccCCcccccCCCCCHHHHHH
Confidence 99999999999999988888899999999999998 899999999988764320 00123577899999999999
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCc-eeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC
Q 010250 388 AIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPI-IGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH 465 (514)
Q Consensus 388 a~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~-~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 465 (514)
+.++|+.++++++.++++++++++++.|+++ .+++. +..+++.|+++.+++.+.. ....+.+.|+++
T Consensus 341 a~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~~~~~l~~~ 409 (449)
T 2cjg_A 341 ARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMCAFSLPTTA-----------DRDELIRQLWQR 409 (449)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEEETTEEEEECSSHH-----------HHHHHHHHHHHT
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEeeccEEEEEEECChH-----------HHHHHHHHHHHC
Confidence 9999999887889999999999999999987 34665 7788999999999875311 245688899999
Q ss_pred CcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 466 GMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 466 Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
||++.+.+ +.|||+|++.+|+++|++++++|+++++++
T Consensus 410 Gv~v~~~g~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 410 AVIVLPAGADTVRFRPPLTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp TEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 99999876 679999999999999999999999998653
No 29
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=100.00 E-value=3.4e-52 Score=434.46 Aligned_cols=408 Identities=27% Similarity=0.483 Sum_probs=321.8
Q ss_pred ccCCccccccCCCCCCeE-EEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchH
Q 010250 68 MLAPFTAGWQSTDVHPLV-IEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPS 146 (514)
Q Consensus 68 ~~~p~~~~~~~~~~~p~~-~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~ 146 (514)
.|+|++... .+.|++ +.+++|+++||.||++|||+.++.|++++||++|+|++|+.+++++...++ +.+.+.+..
T Consensus 13 ~~~~~~~~~---~~~~~~~~~~~~g~~~~d~~g~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~ 88 (429)
T 1s0a_A 13 ILHPFTSMT---SPLPVYPVVSAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVM-FGGITHAPA 88 (429)
T ss_dssp BCCTTCCSS---SCCCCEEEEEEEBTEEEETTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCC-CSSEECHHH
T ss_pred hcccccccc---ccCCceeEEeeeeeEEEeCCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccc-ccccCCHHH
Confidence 456655432 125655 999999999999999999999999999999999999999999998754321 112345667
Q ss_pred HHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcc-ccCCCC
Q 010250 147 LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPA-LHQKFD 225 (514)
Q Consensus 147 ~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~-~~~~~~ 225 (514)
.+++++|+++++ .+.++|+|++||+||++.|+++++.+...++.+ +++||+++++|||++..++.+++... ++..+.
T Consensus 89 ~~l~~~la~~~~-~~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~~-~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~ 166 (429)
T 1s0a_A 89 IELCRKLVAMTP-QPLECVFLADSGSVAVEVAMKMALQYWQAKGEA-RQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWK 166 (429)
T ss_dssp HHHHHHHHHHSC-TTCCEEEEESSHHHHHHHHHHHHHHHHHHHTCC-CCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGT
T ss_pred HHHHHHHHHhCC-CCCCEEEEeCCHHHHHHHHHHHHHHHhcccCCC-CCeEEEECCCCCCCchhhhhhcCCchhhccccc
Confidence 899999999974 367899999999999999999887664333333 56899999999999887777665432 233333
Q ss_pred CCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHhc
Q 010250 226 LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKY 304 (514)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv-~~~~G~~~p~~~~L~~l~~l~~~~ 304 (514)
...+.+..+++|..... +.+.+.++++|++++.+. ++++++|++||+ ++++|.++|+++++++|+++|++|
T Consensus 167 ~~~~~~~~~~~~~~~~~-------~~~~~~d~~~l~~~l~~~-~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~ 238 (429)
T 1s0a_A 167 GYLPENLFAPAPQSRMD-------GEWDERDMVGFARLMAAH-RHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDRE 238 (429)
T ss_dssp TTSCCCEEECCCCSBC--------CCCCGGGGHHHHHHHHHH-TTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHH
T ss_pred CCCCCceEeCCCccccc-------ccchHHHHHHHHHHHHhC-CCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHc
Confidence 22233334444321000 011223467888887643 247899999999 999999999999999999999999
Q ss_pred CCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHH
Q 010250 305 DILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVS 384 (514)
Q Consensus 305 gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~ 384 (514)
|++||+||+|+|||++|..++++++++.||++++||+|+||++|+|++++++++++.+.... .+.+.+++|+++|+++
T Consensus 239 ~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~t~sK~l~~G~~~iG~~~~~~~~~~~l~~~~--~~~~~~~~t~~~n~~~ 316 (429)
T 1s0a_A 239 GILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETISNGE--AGCFMHGPTFMGNPLA 316 (429)
T ss_dssp TCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTSSSCCEEEEECHHHHHHHHTST--TSSCSCCCTTTTCHHH
T ss_pred CCEEEEeehhhCCcccchHHHhhhcCCCCCEEEecccccCCCccceEEEeCHHHHHHhhcCC--CcccccCCCCCCCHHH
Confidence 99999999999999999877788889999999999999987689999999999998886421 1123366799999999
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH
Q 010250 385 CAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK 464 (514)
Q Consensus 385 ~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 464 (514)
++++.++|+.++++++.++++++++++++.|+++...+.+..+++.|+++++++.... ....+...|++
T Consensus 317 ~~a~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~l~~~l~~ 385 (429)
T 1s0a_A 317 CAAANASLAILESGDWQQQVADIEVQLREQLAPARDAEMVADVRVLGAIGVVETTHPV-----------NMAALQKFFVE 385 (429)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGGGCTTEEEEEEETTEEEEEESSCB-----------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEeeEEEEEEECCcc-----------cHHHHHHHHHH
Confidence 9999999999887788999999999999999887445666678889999999885421 13457788999
Q ss_pred CCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 465 HGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 465 ~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
+||++.+.++.|||+|++.+|++|+++++++|++++++
T Consensus 386 ~Gi~v~~~~~~iRis~~~~~t~e~i~~~~~~l~~~~~~ 423 (429)
T 1s0a_A 386 QGVWIRPFGKLIYLMPPYIILPQQLQRLTAAVNRAVQD 423 (429)
T ss_dssp TTEECCCBTTEEEECCCTTCCHHHHHHHHHHHHHHTSS
T ss_pred CCCEEeccCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 99999988889999999999999999999999988754
No 30
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=100.00 E-value=1.6e-52 Score=437.56 Aligned_cols=405 Identities=22% Similarity=0.347 Sum_probs=312.7
Q ss_pred cccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcccc
Q 010250 58 STTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS 137 (514)
Q Consensus 58 ~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~ 137 (514)
+..+++.+..+.++.+..|. ++|+++.+++|+++||.||++||||.++++++++||+||+|++|+.++++++..+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~-- 91 (434)
T 2epj_A 17 ERTKELFPGGVNSPVRAAVK---PYPFYVKRGEGAYLYTVDGARIVDLVLAYGPLILGHKHPRVLEAVEEALARGWLY-- 91 (434)
T ss_dssp HHHTTTSGGGSSSGGGGGCS---SSCCCEEEEEBTEEEETTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCC--
T ss_pred HHHHhhcCCCcCcccccccC---CCCeeEEeeecCEEEECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhCCCC--
Confidence 33445555443333332221 3689999999999999999999999999999999999999999999999874321
Q ss_pred ccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC
Q 010250 138 FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL 217 (514)
Q Consensus 138 ~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~ 217 (514)
+.+.+...+++++|+++++ +.++|+|++||+||++.|+++|+.+ .++++||+++++|||.+..+++.++.
T Consensus 92 --~~~~~~~~~l~~~la~~~~--~~~~v~~~~sgseA~~~al~~ar~~------~~~~~vi~~~~~yhg~~~~~~~~~~~ 161 (434)
T 2epj_A 92 --GAPGEAEVLLAEKILGYVK--RGGMIRFVNSGTEATMTAIRLARGY------TGRDLILKFDGCYHGSHDAVLVAAGS 161 (434)
T ss_dssp --SSCCHHHHHHHHHHHHHHC--TTCEEEEESSHHHHHHHHHHHHHHH------HCCCEEEEEETCCCCSSGGGSEECC-
T ss_pred --CCCCHHHHHHHHHHHHhCC--CCCEEEEeCCHHHHHHHHHHHHHHh------hCCCeEEEEcCCcCCCCHHHHHhcCC
Confidence 3466778899999999874 5789999999999999999998766 34678999999999998777665543
Q ss_pred ccccCC----CCCCC---CcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCC
Q 010250 218 PALHQK----FDLPA---PFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPP 290 (514)
Q Consensus 218 ~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~ 290 (514)
...... .+.+. ..+..++. +++++|++++.+.. +++++|++||+++++|.+.|+
T Consensus 162 ~~~~~~~p~~~g~~~~~~~~~~~~~~------------------~d~~~le~~l~~~~-~~~~~vi~ep~~~~~G~~~~~ 222 (434)
T 2epj_A 162 AAAHYGVPTSAGVPEAVARLTLVTPY------------------NDVEALERVFAEYG-DRIAGVIVEPVIANAGVIPPR 222 (434)
T ss_dssp -----CEESSTTCCHHHHTTEEEEET------------------TCHHHHHHHHHHHG-GGEEEEEECSSBCSSSCBCCC
T ss_pred CccccCCCCCCCCCCcccCceEecCC------------------CCHHHHHHHHHhCC-CCEEEEEEeCCcCCCCccCCC
Confidence 211100 01000 00111110 12578888886532 479999999999999999999
Q ss_pred hhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCC
Q 010250 291 ATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLG 370 (514)
Q Consensus 291 ~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~ 370 (514)
++|+++|+++|++||++||+||||+|| |+|..++++++++.||+++|||++++| +|+|++++++++++.+... +
T Consensus 223 ~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~di~s~sK~l~~G-~~~G~v~~~~~~~~~l~~~----~ 296 (434)
T 2epj_A 223 REFLAALQRLSRESGALLILDEVVTGF-RLGLEGAQGYFNIEGDIIVLGKIIGGG-FPVGAVAGSREVMSLLTPQ----G 296 (434)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTTHHHHHHTCCCSEEEEEGGGGTT-SSCEEEEECHHHHTTBTTT----S
T ss_pred HHHHHHHHHHHHHcCCEEEEEcchhce-eCCcchhhHHhCCCCCeeeecchhcCC-cceeeeeecHHHHHhhccC----C
Confidence 999999999999999999999999999 888878888899999999999999997 8999999999998887631 2
Q ss_pred cccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCC--C
Q 010250 371 SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNE--P 447 (514)
Q Consensus 371 ~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~--~ 447 (514)
...+++||++||++++++.++|+.++++++.++++++++++++.|+++ .++++...+++.|+++++++.+...... .
T Consensus 297 ~~~~~~t~~~~~~~~aa~~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~ 376 (434)
T 2epj_A 297 KVFNAGTFNAHPITMAAGLATLKALEEEPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQLFIGVEEVSNAAQA 376 (434)
T ss_dssp SBCCCCTTTTCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEETCSCCSSHHHH
T ss_pred CcccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeCCCcccchhc
Confidence 234678999999999999999999988889999999999999999886 3345556788999999999864210000 0
Q ss_pred CCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 448 FPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 448 ~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
..........+.+.|+++||++.+++.. |+.+++.+|++|+++++++|+++++++
T Consensus 377 ~~~~~~~~~~~~~~l~~~Gv~v~~~~~~-~~~~~~~~t~e~i~~~l~~l~~~l~~~ 431 (434)
T 2epj_A 377 RKADKKFYVKLHEEMLRRGVFIAPSNLE-AVFTGLPHQGEALEIAVEGLRSSLKTV 431 (434)
T ss_dssp TTSCHHHHHHHHHHHHHTTEECCSSTTS-CEECCTTCSHHHHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHCCeEEeccCCC-cEEEeccCCHHHHHHHHHHHHHHHHHH
Confidence 0000112456888999999999886532 445668999999999999999998765
No 31
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=100.00 E-value=1.6e-51 Score=428.83 Aligned_cols=386 Identities=23% Similarity=0.352 Sum_probs=301.7
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++.+++|+++||.||++||||.+++|++++||+||+|++|+.++++++..+ +++.+...+++++|+++++ +
T Consensus 34 ~p~~~~~~~g~~~~d~~g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~----~~~~~~~~~l~~~l~~~~~--~ 107 (424)
T 2e7u_A 34 TPPFLVRGEGAYVWDADGNRYLDYVMSWGPLILGHAHPKVLARVRETLERGLTF----GAPSPLEVALAKKVKRAYP--F 107 (424)
T ss_dssp CCCCEEEEEBTEEEETTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCC----SSCCHHHHHHHHHHHHHCT--T
T ss_pred CCeeEEeeecCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCCC----CCCCHHHHHHHHHHHHhCC--C
Confidence 689999999999999999999999999999999999999999999999874321 3466778999999999974 5
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC-CCcccccCCCCcc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP-APFVLHTDCPHYW 240 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~-~~~~~~~~~~~~~ 240 (514)
.++|+|++||+||++.|+++|+.+ +++++||+++++|||.+..++..++..... +..+ ...+.....+..+
T Consensus 108 ~~~v~~~~~g~ea~~~al~~ar~~------~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~--~~~p~~~g~~~~~~~~~~ 179 (424)
T 2e7u_A 108 VDLVRFVNSGTEATMSALRLARGY------TGRPYIVKFRGNYHGHADGLLVEAGSGALT--LGVPSSAGVPEEYAKLTL 179 (424)
T ss_dssp CCEEEEESSHHHHHHHHHHHHHHH------HCCCEEEEETTCCCCCCGGGSEECCSSSCC--BCEESSTTCCHHHHTTEE
T ss_pred CCEEEEeCCHHHHHHHHHHHHHHh------hCCCEEEEECCCcCCCcHHHHHhcCCcccc--cCCCCCCCCCCccCCceE
Confidence 789999999999999999998766 346789999999999987766554432110 0000 0000000000000
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 320 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~ 320 (514)
..++ +++++|++++.+. ++++++|++||+++++|.+.|+++|+++|+++ ++||++||+||+|+|| |+
T Consensus 180 ~~~~----------~d~~~le~~l~~~-~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~ 246 (424)
T 2e7u_A 180 VLEY----------NDPEGLREVLKRR-GEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RL 246 (424)
T ss_dssp EECT----------TCHHHHHHHHHHH-GGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TS
T ss_pred eCCC----------CCHHHHHHHHHhC-CCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-cc
Confidence 1110 1257888887643 24789999999999999999999999999999 9999999999999999 88
Q ss_pred cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-cc
Q 010250 321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RN 399 (514)
Q Consensus 321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~ 399 (514)
|..++.+++++.||+++|||++++| +|+|++++++++++.+... +...+++||++||++++++.++|+.+++ ++
T Consensus 247 g~~~~~~~~~~~~di~s~sK~l~~G-~~~G~~~~~~~~~~~~~~~----~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 321 (424)
T 2e7u_A 247 AFGGATELLGLKPDLVTLGKILGGG-LPAAAYAGRREIMEKVAPL----GPVYQAGTLSGNPLAMAAGLATLELLEENPG 321 (424)
T ss_dssp STTHHHHHHTCCCSEEEECGGGGTT-SSCEEEEECHHHHTTBTTT----SSBCCCCTTCSCHHHHHHHHHHHHHHHHCTH
T ss_pred chhHHHHHhCCCcchhhhhhhhhCC-cceEEEEEcHHHHhhhccc----CCcccCCCCCCCHHHHHHHHHHHHHHHhccH
Confidence 8878888899999999999999987 8999999999999887631 2235778999999999999999999887 78
Q ss_pred HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCC--CCCCccchHHHHHHHHHHCCcEEEeeCCEE
Q 010250 400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNE--PFPPEWGIGAYFGAQCEKHGMLVRVSGDNI 476 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~i 476 (514)
+.++++++++++++.|+++ .+++++..+++.|+++++++.+...... ...........+.+.|+++||++.+++..
T Consensus 322 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~- 400 (424)
T 2e7u_A 322 YYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSNFE- 400 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSSSS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccCCC-
Confidence 9999999999999999887 3456666788999999999864210000 00001112456888999999999876532
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 477 MMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 477 Ri~p~~~~t~e~id~~~~~l~~~l 500 (514)
|+.+++.+|+++|++++++|++++
T Consensus 401 ~~~~~~~~t~~~i~~~l~~l~~~l 424 (424)
T 2e7u_A 401 AAFLSVAHREEDVEKTLEALRKAL 424 (424)
T ss_dssp CEECCTTCCHHHHHHHHHHHHHHC
T ss_pred ceEeeccCCHHHHHHHHHHHHHhC
Confidence 344569999999999999998763
No 32
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=100.00 E-value=1e-50 Score=422.22 Aligned_cols=386 Identities=31% Similarity=0.544 Sum_probs=308.0
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCC-CHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGS-EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 160 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~-~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~ 160 (514)
.|+++.+++|+++||.||++||||.++.|++++||+ ||+|++|+.+++++..++.. ..++.+...+++++|+++++..
T Consensus 24 ~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~~l~~~la~~~~~~ 102 (419)
T 2eo5_A 24 FPLVIDHGEGVWIYDVDGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLAHAAA-NDFYNIPQLELAKKLVTYSPGN 102 (419)
T ss_dssp CCCCEEEEEBTEEEETTSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSCCCSC-SCSCCHHHHHHHHHHHHHSSCS
T ss_pred CCceEEeeecCEEEECCCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCccccc-cccCCHHHHHHHHHHHHhCCCC
Confidence 678899999999999999999999999999999999 99999999999987643211 1245667889999999987432
Q ss_pred CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-cccCCCCCCCCcccccCCCCc
Q 010250 161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHY 239 (514)
Q Consensus 161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~ 239 (514)
..++|+|++||+||++.|+++++.+ + +++||+++++|||.+..++++++.+ .++..+......+..++.++.
T Consensus 103 ~~~~v~~~~gg~ea~~~ai~~~~~~------~-~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 175 (419)
T 2eo5_A 103 FQKKVFFSNSGTEAIEASIKVVKNT------G-RKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNP 175 (419)
T ss_dssp SCEEEEEESSHHHHHHHHHHHHHTT------S-CCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCS
T ss_pred cCCEEEEeCchHHHHHHHHHHHHHh------h-CCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCcc
Confidence 1579999999999999999988633 2 5789999999999998888777754 444444433334555566555
Q ss_pred ccCCCCCC----ChhHHHHHHHHHHH-HHHHHhC-CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEech
Q 010250 240 WRYAHPGE----TEEEYSTRLANNLE-DLILKEG-PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV 313 (514)
Q Consensus 240 ~~~~~~~~----~~~~~~~~~~~~le-~li~~~~-~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv 313 (514)
|+.++... +.+++. .++++|+ +++.+.. ++++++|++||+++++|.++++++++++|+++|++||++||+|||
T Consensus 176 ~~~~~g~~~~~~~~~~~~-~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~ 254 (419)
T 2eo5_A 176 YRNPWHINGYENPSELVN-RVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEV 254 (419)
T ss_dssp SSCTTCCCTTTCHHHHHH-HHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECT
T ss_pred ccccccccccccchhhHH-HHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 54322110 001222 4578888 8776421 146899999999999999999999999999999999999999999
Q ss_pred hcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHH
Q 010250 314 ICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALK 393 (514)
Q Consensus 314 ~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~ 393 (514)
|+|||++|..++++++++.||+++|||++++|++|+|+++++++++ .+ . + .+++|+++|+++++++.++|+
T Consensus 255 ~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~~G~~riG~~~~~~~~~-~~-~-----~--~~~~t~~~n~~~~~aa~aal~ 325 (419)
T 2eo5_A 255 QMGLGRTGKLFAIENFNTVPDVITLAKALGGGIMPIGATIFRKDLD-FK-P-----G--MHSNTFGGNALACAIGSKVID 325 (419)
T ss_dssp TTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTTSCCEEEEEEGGGC-CC--------------CCCCCHHHHHHHHHHHH
T ss_pred ccCCccCcchhhHHhcCCCCCEEEecccccCCccceEEEEEchHhh-cC-C-----c--ccCCCCCCCHHHHHHHHHHHH
Confidence 9999999987778888999999999999998768999999999877 55 2 1 456799999999999999999
Q ss_pred HHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC
Q 010250 394 IYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG 473 (514)
Q Consensus 394 ~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g 473 (514)
.+++ +.+++++++++|.+.|+++ +..+++.|+++++++.... .... +...|+++||++.+.+
T Consensus 326 ~~~~--~~~~~~~~~~~l~~~L~~~-----~~~~~~~g~~~~i~~~~~~----------~~~~-~~~~l~~~Gv~v~~~~ 387 (419)
T 2eo5_A 326 IVKD--LLPHVNEIGKIFAEELQGL-----ADDVRGIGLAWGLEYNEKK----------VRDR-IIGESFKRGLLLLPAG 387 (419)
T ss_dssp HHHH--HHHHHHHHHHHHHHHHTTS-----SSEEEEETTEEEEECSCHH----------HHHH-HHHHHHHTTEECEEET
T ss_pred HHHH--HHHHHHHHHHHHHHHHHHh-----hhheEeeeEEEEEEEecCc----------cHHH-HHHHHHHCCCEEecCC
Confidence 8765 8899999999999999775 3467889999999874210 1245 7888999999999875
Q ss_pred -CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 474 -DNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 474 -~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+.+||+|++.+|++++++++++|+++++++
T Consensus 388 ~~~lRis~~~~~t~e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 388 RSAIRVIPPLVISEEEAKQGLDILKKVIKVV 418 (419)
T ss_dssp TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 689999999999999999999999988653
No 33
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=3.6e-50 Score=413.83 Aligned_cols=371 Identities=28% Similarity=0.492 Sum_probs=313.9
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++.+++|+++||.||++||||.+++++.+|||+||+|.+|+.++++++.+++.. .+.+...+++++|+++++
T Consensus 18 ~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~la~~~g--- 92 (392)
T 3ruy_A 18 LPIVISKAEGVWVEDPEGNRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLTSRA--FHSDQLGPWYEKVAKLTN--- 92 (392)
T ss_dssp CSCEECEEEBTEEECTTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTT--SEETTHHHHHHHHHHHHT---
T ss_pred CCceEEeeeeCEEEeCCCCEEEEcCCChhhhccCCCCHHHHHHHHHHHHhccccccc--cCCHHHHHHHHHHHHhcC---
Confidence 789999999999999999999999999999999999999999999999876554322 356778899999999973
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHH--HhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYY--NNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 239 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~--~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 239 (514)
.++++|++||++|++.|+++++.+ ......+++++||+.+++|||.+..+.++++.+.++..+.+..+.+..++..
T Consensus 93 ~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 170 (392)
T 3ruy_A 93 KEMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYG-- 170 (392)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTT--
T ss_pred CCEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcc--
Confidence 679999999999999999988754 1122224567999999999999988888887766665555333332222211
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250 240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319 (514)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr 319 (514)
++++|++++. +++++|+++|+++++|.+.|+++|+++|+++|++||++||+||+|+|||+
T Consensus 171 ----------------d~~~l~~~l~----~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~ 230 (392)
T 3ruy_A 171 ----------------DLEALKAAIT----PNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGR 230 (392)
T ss_dssp ----------------CHHHHHHHCC----TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTT
T ss_pred ----------------cHHHHHHHhc----cCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCc
Confidence 2577777764 57999999999999999999999999999999999999999999999999
Q ss_pred ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 399 (514)
Q Consensus 320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~ 399 (514)
+|..++.+.+++.||+++|||+|+||++|+|++++++++++.+.. ..++++++.++++++++.++|+.+++++
T Consensus 231 ~g~~~~~~~~~~~~d~~~~SK~l~gG~~~~G~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~ 303 (392)
T 3ruy_A 231 TGKVFACDWDNVTPDMYILGKALGGGVFPISCAAANRDILGVFEP-------GSHGSTFGGNPLACAVSIAALEVLEEEK 303 (392)
T ss_dssp TSSSSGGGGGTCCCSEEEECGGGGTTTSCCEEEEECHHHHTTCCT-------TSSCCSSTTCHHHHHHHHHHHHHHHHTT
T ss_pred cccchhhhccCCCCCEEEEchhhhCChhhhEEEEECHHHHhhhcc-------CCcCCCCCCCHHHHHHHHHHHHHHHhhh
Confidence 999888888999999999999999987899999999999887752 3567789999999999999999887788
Q ss_pred HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEE
Q 010250 400 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMM 478 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi 478 (514)
+.++++++++++++.|+++ ..+.+..+++.|.++.+.+.. . ...+.+.|.++||++.+++ +.+|+
T Consensus 304 ~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~g~~~~~~~~~-~------------~~~l~~~l~~~gi~v~~~~~~~iRi 369 (392)
T 3ruy_A 304 LTERSLQLGEKLVGQLKEI-DNPMITEVRGKGLFIGIELNE-P------------ARPYCEQLKAAGLLCKETHENVIRI 369 (392)
T ss_dssp HHHHHHHHHHHHHHHHTTC-CCTTEEEEEEETTEEEEEESS-C------------SHHHHHHHHTTTEECCCBTTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHh-cCCCceEEEeeeeEEEEEEcc-h------------HHHHHHHHHHCCcEEecCCCCEEEE
Confidence 9999999999999999887 336677888899999998754 1 2457888999999999875 67999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHH
Q 010250 479 SPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 479 ~p~~~~t~e~id~~~~~l~~~l 500 (514)
+|++.+|++|+++++++|++++
T Consensus 370 ~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 370 APPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999876
No 34
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=100.00 E-value=9.7e-50 Score=412.26 Aligned_cols=379 Identities=29% Similarity=0.502 Sum_probs=318.9
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++.+++|+++||.||++||||.++++++++||+||+|.+|+.++++++.+... ..+.+...+++++|++++ +
T Consensus 21 ~~~~~~~~~g~~~~~~~g~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~l~~~la~~~---~ 95 (406)
T 4adb_A 21 APFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGN--GYTNEPVLRLAKKLIDAT---F 95 (406)
T ss_dssp CSSCEEEEEBTEEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCT--TSCCHHHHHHHHHHHHHS---S
T ss_pred CCceEEeeccCEEEeCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhcccccC--CcCCHHHHHHHHHHHhhC---C
Confidence 78899999999999999999999999999999999999999999999987544322 235677889999999997 4
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
.++++|++||++|++.|+++++.++...+.+++++||+.+++||+....+...++.+.+...+.+....+..++.+
T Consensus 96 ~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 171 (406)
T 4adb_A 96 ADRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYN---- 171 (406)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTT----
T ss_pred CCeEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCC----
Confidence 5699999999999999999987765555656778999999999999888888887766554444332333222221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G 321 (514)
++++|++++. +++++|+++|++++||+++++.+++++|+++|++||++||+||+|+|||++|
T Consensus 172 --------------d~~~l~~~l~----~~~~~v~~~p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g 233 (406)
T 4adb_A 172 --------------DINSASALID----DSTCAVIVEPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTG 233 (406)
T ss_dssp --------------CHHHHHTTCS----TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTS
T ss_pred --------------cHHHHHHHhc----CCeEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc
Confidence 1466666653 5789999999999999998899999999999999999999999999999999
Q ss_pred ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV 401 (514)
Q Consensus 322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~ 401 (514)
..++.+.+++.||+++|||++++| +|+|++++++++++.+.. ..++++++.++++++++.++|+.++++++.
T Consensus 234 ~~~~~~~~~~~~d~~t~sK~~~~G-~r~G~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 305 (406)
T 4adb_A 234 ELYAYMHYGVTPDLLTTAKALGGG-FPVGALLATEECARVMTV-------GTHGTTYGGNPLASAVAGKVLELINTPEML 305 (406)
T ss_dssp SSSHHHHHTCCCSEEEECGGGGTT-SCCEEEEECHHHHHTCCT-------TSSCCSSTTCHHHHHHHHHHHHHHSSHHHH
T ss_pred hhHHHHhcCCCCCEEEechhhcCC-CCeEEEEEcHHHHhhhcc-------CCcCCCCCCCHHHHHHHHHHHHHHHhcCHH
Confidence 988888899999999999999977 899999999999888763 356789999999999999999988777889
Q ss_pred HHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEe
Q 010250 402 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMS 479 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~ 479 (514)
++++++++++++.|+++ ..++....+++.|+++++.+.+.... ....+.+.|.++||++.+.+ +.+|++
T Consensus 306 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---------~~~~~~~~l~~~gi~v~~~~~~~iRi~ 376 (406)
T 4adb_A 306 NGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYAG---------QAKQISQEAAKAGVMVLIAGGNVVRFA 376 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECTTTTT---------CHHHHHHHHHHTTEECEESSTTEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEEeCCcHH---------HHHHHHHHHHHCCcEEeecCCCeEEEE
Confidence 99999999999999887 33466778888999999998653210 14568899999999999875 679999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 480 PPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 480 p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
|++.+|++++++++++|+++++++.
T Consensus 377 ~~~~~~~e~i~~~~~~l~~~l~~~~ 401 (406)
T 4adb_A 377 PALNVSEEEVTTGLDRFAAACEHFV 401 (406)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999997764
No 35
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=100.00 E-value=1.9e-50 Score=424.29 Aligned_cols=384 Identities=23% Similarity=0.316 Sum_probs=286.8
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
+|+++.+++|+++||.||++||||.+++|++++||+||+|++|+.+++++...+ +.+.+...++++++++.++ +
T Consensus 39 ~p~~~~~~~G~~~~d~~g~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~----~~~~~~~~~la~~l~~~~~--~ 112 (453)
T 2cy8_A 39 HGLFISDAQGVHKTDVDGNVYLDFFGGHGALVLGHGHPRVNAAIAEALSHGVQY----AASHPLEVRWAERIVAAFP--S 112 (453)
T ss_dssp CCCCEEEEEBTEEEETTCCEEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTCSS----CSSCHHHHHHHHHHHHHCT--T
T ss_pred CCceEEEeecCEEEECCCCEEEECcccHhhcccCCCCHHHHHHHHHHHHhCCCC----CCCCHHHHHHHHHHHhhCC--C
Confidence 689999999999999999999999999999999999999999999999874321 3467788899999999874 5
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCC--CCCCC---CcccccCC
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK--FDLPA---PFVLHTDC 236 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~--~~~~~---~~~~~~~~ 236 (514)
.++|+|++||+||++.|+++|+.+ .++++||+++++|||.+...+..++.. +... .+.+. +.+..++.
T Consensus 113 ~~~v~~~~gg~eA~~~al~~ar~~------~~~~~vi~~~~~yhg~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~ 185 (453)
T 2cy8_A 113 IRKLRFTGSGTETTLLALRVARAF------TGRRMILRFEGHYHGWHDFSASGYNSH-FDGQPAPGVLPETTANTLLIRP 185 (453)
T ss_dssp CSEEEEESCHHHHHHHHHHHHHHH------HCCCEEEEECC-----------------------------CGGGEEEECT
T ss_pred CCEEEEeCCHHHHHHHHHHHHHHh------hCCCEEEEEcCCcCCCchhhHhhcCCc-cCCCcCCCCCccccCceeecCC
Confidence 789999999999999999998765 245689999999999988776644320 0000 01110 01111110
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC
Q 010250 237 PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA 316 (514)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG 316 (514)
+++++|++++.+.. +++++|++||+++++|.++|+++|+++|+++|++||++||+||+|+|
T Consensus 186 ------------------~d~~~le~~l~~~~-~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g 246 (453)
T 2cy8_A 186 ------------------DDIEGMREVFANHG-SDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISG 246 (453)
T ss_dssp ------------------TCHHHHHHHHHHHG-GGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTT
T ss_pred ------------------CCHHHHHHHHHhcC-CCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCccc
Confidence 12578888886532 47899999999998999999999999999999999999999999999
Q ss_pred cccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH-H
Q 010250 317 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI-Y 395 (514)
Q Consensus 317 ~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~-~ 395 (514)
| |+|..++.+++++.||++++||++++| +|+|++++++++++.+.... .+...+++||++||++++++.++|+. +
T Consensus 247 ~-~~g~~~~~~~~~~~~di~s~sK~l~~G-~~~G~v~~~~~~~~~l~~~~--~~~~~~~~t~~~n~~~~aa~~aal~~~~ 322 (453)
T 2cy8_A 247 F-RVGNHGMQALLDVQPDLTCLAKASAGG-LPGGILGGREDVMGVLSRGS--DRKVLHQGTFTGNPITAAAAIAAIDTIL 322 (453)
T ss_dssp T-TTCTTHHHHHHTCCCSEEEEEGGGGTT-SSCEEEEECHHHHTTSSSCC-----------CCCCHHHHHHHHHHHHHHH
T ss_pred c-ccCchhhhHHhCCCCcEEEEChhhhCC-cceEEEechHHHHHHhcccc--CCCceeCCCCCCCHHHHHHHHHHHHHHh
Confidence 9 888877888899999999999999987 89999999999988875310 01234678999999999999999998 8
Q ss_pred hhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEcc-----CCC---CCCCCCCccchHHHHHHHHHHCC
Q 010250 396 KERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFAD-----NKS---PNEPFPPEWGIGAYFGAQCEKHG 466 (514)
Q Consensus 396 ~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~-----~~~---~~~~~~~~~~~~~~~~~~l~~~G 466 (514)
++++.++++++++++++.|+++ .+++++..+++.|+++++++.+ ... -.............+...|+++|
T Consensus 323 -~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G 401 (453)
T 2cy8_A 323 -EDDVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEG 401 (453)
T ss_dssp -HTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTT
T ss_pred -hhhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHCC
Confidence 7789999999999999999887 3456666788999999999864 100 00000001112456888999999
Q ss_pred cEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 467 MLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 467 v~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
|++.+.+ .+| +++.+|+++|++++++|+++++++.+
T Consensus 402 v~v~~~~-~~~--l~~~~t~~~i~~~l~~l~~~l~~~~~ 437 (453)
T 2cy8_A 402 VDIGGRG-SVF--LSAQHEREHVEHLVTTFDRVLDRLAD 437 (453)
T ss_dssp EECBTTT-EEE--CCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEeCCC-CEE--eeccCCHHHHHHHHHHHHHHHHHHHh
Confidence 9996543 455 46999999999999999999987643
No 36
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=100.00 E-value=8.7e-48 Score=400.32 Aligned_cols=396 Identities=26% Similarity=0.479 Sum_probs=312.4
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++.+++|+++||.||++||||.++.++.++||.+|+|++|+.+++++....+. ...+.+...++++.|++++++..
T Consensus 23 ~~~~~~~~~g~~~~d~~g~~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~-~~~~~~~~~~l~~~la~~~~~~~ 101 (426)
T 1sff_A 23 HPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCF-QVLAYEPYLELCEIMNQKVPGDF 101 (426)
T ss_dssp EEEEEEEEEBTEEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCT-TTEECHHHHHHHHHHHHHSSCSS
T ss_pred CCceEEecccCEEEeCCCCEEEEcccChhhcccCCCCHHHHHHHHHHHHhCCCccc-cccCCHHHHHHHHHHHHhCCccc
Confidence 57899999999999999999999999999899999999999999999976543211 12356677899999999984322
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-cccCCCCCCCCcccccCCCCcc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYW 240 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
.++|+|++||+||++.++++++.+. ++.+||+++++|||....++.+++.+ .++..+++....+..++++..+
T Consensus 102 ~~~v~~~~g~~~a~~~~~~~a~~~~------~~~~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~ 175 (426)
T 1sff_A 102 AKKTLLVTTGSEAVENAVKIARAAT------KRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPL 175 (426)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHHH------TCCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGG
T ss_pred ccEEEEeCchHHHHHHHHHHHHHhh------CCCeEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccc
Confidence 2799999999999999999776552 23489999999999987666665543 2333443322233344444322
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHh-CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~~~-~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr 319 (514)
+. .....++++|++.+.+. .++++++|+++|+++++|.+.++++++++|+++|++||++||+||+|+||++
T Consensus 176 ~~--------~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~ 247 (426)
T 1sff_A 176 HG--------ISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGR 247 (426)
T ss_dssp GT--------BCHHHHHHHHHHHHHHTCCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTT
T ss_pred cc--------cchHHHHHHHHHHHHhccCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCc
Confidence 10 01123467888887642 1247899999999888998999999999999999999999999999999999
Q ss_pred ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 399 (514)
Q Consensus 320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~ 399 (514)
+|..++++.+++.||+++|||++++| +|+|++++++++++.+.. ..+.+|++.|+++++++.++|+.+++++
T Consensus 248 ~g~~~~~~~~~~~~di~s~sK~~~~G-lriG~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~a~~aal~~~~~~~ 319 (426)
T 1sff_A 248 TGTLFAMEQMGVAPDLTTFAKSIAGG-FPLAGVTGRAEVMDAVAP-------GGLGGTYAGNPIACVAALEVLKVFEQEN 319 (426)
T ss_dssp TSSSSGGGGTTSCCSEEEECGGGGTS-SCCEEEEEEHHHHTTSCT-------TSBCCSSSSCHHHHHHHHHHHHHHHHTT
T ss_pred ccchhhhhhcCCCCCEEEEcccccCC-CceEEEEEcHHHHhhhcc-------CCcCcCCCCCHHHHHHHHHHHHHHHhcC
Confidence 99877778888899999999999987 899999999998877752 2356789999999999999999988778
Q ss_pred HHHHHHHHHHHHHhhhhhcc-CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CE
Q 010250 400 IVEQVNKIAPKFQDGVKAFS-DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DN 475 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l~-~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~ 475 (514)
+.++++++++++++.|+++. .++.+..+++.|.++++++........+ .......+.+.|+++||++.+++ +.
T Consensus 320 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~l~~~l~~~gi~v~~~~~~~~~ 396 (426)
T 1sff_A 320 LLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNKP---DAKLTAEIVARARDKGLILLSCGPYYNV 396 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEETTEEEEEEBGGGCTTSB---CHHHHHHHHHHHHHTTEECEEESTTSCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCC---ChHHHHHHHHHHHHCCcEEecCCCCCCE
Confidence 99999999999999998873 4666667788899999998642111000 01124568888999999999875 67
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 476 IMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 476 iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+||++++.+|++++++++++|+++++++
T Consensus 397 iRi~~~~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 397 LRILVPLTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998654
No 37
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=100.00 E-value=2.5e-46 Score=385.93 Aligned_cols=374 Identities=28% Similarity=0.545 Sum_probs=300.8
Q ss_pred CCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC
Q 010250 81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 160 (514)
Q Consensus 81 ~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~ 160 (514)
..|+++.+++|+++||.||++||||.+++|++++||++|+|.+|+.+++++....+.. .+.+...+++++|++++
T Consensus 21 ~~~~~~~~~~g~~~~d~~g~~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~la~~~--- 95 (397)
T 2ord_A 21 RFPATFVYGKGSWIYDEKGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIHCSNL--FWNRPQMELAELLSKNT--- 95 (397)
T ss_dssp CCSCEEEEEEBTEEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCTT--SEEHHHHHHHHHHHHTT---
T ss_pred CCCceEEeeecCEEEECCCCEEEECCccccccccCCCCHHHHHHHHHHHHhcccCccc--cCCHHHHHHHHHHHHhc---
Confidence 4789999999999999999999999999999999999999999999999875443221 24567789999999987
Q ss_pred CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcc
Q 010250 161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW 240 (514)
Q Consensus 161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
+.++++|++||++|++.|+++++.+... +.+++++||+++++|||.+..++...+.+.++.++.+....+..++..
T Consensus 96 g~~~v~~~~gg~~a~~~al~~~~~~~~~-~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~--- 171 (397)
T 2ord_A 96 FGGKVFFANTGTEANEAAIKIARKYGKK-KSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEFN--- 171 (397)
T ss_dssp TSCEEEEESSHHHHHHHHHHHHHHHHHH-HCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECTT---
T ss_pred CCCeEEEeCCHHHHHHHHHHHHHHHhhc-CCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecCC---
Confidence 3579999999999999999988654322 123456899999999998876655555443222332222222222211
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250 241 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 320 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~ 320 (514)
++++|++.+. +++++|+++|+++++|.+.++.+++++|+++|++||++||+||+|+||+++
T Consensus 172 ---------------d~~~l~~~l~----~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~ 232 (397)
T 2ord_A 172 ---------------NVEDLRRKMS----EDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRT 232 (397)
T ss_dssp ---------------CHHHHHHHCC----TTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTT
T ss_pred ---------------CHHHHHHHhh----cCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccC
Confidence 2467777664 478999999999999987888899999999999999999999999999999
Q ss_pred cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250 321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI 400 (514)
Q Consensus 321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~ 400 (514)
|..+..+.+++.||+++|||++++| +|+|+++++++++ .+.. ..++.+++.++++++++.++|+.++++++
T Consensus 233 g~~~~~~~~~~~~d~~s~sK~~~~G-~r~G~~~~~~~~~-~l~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 303 (397)
T 2ord_A 233 GKLFAYQKYGVVPDVLTTAKGLGGG-VPIGAVIVNERAN-VLEP-------GDHGTTFGGNPLACRAGVTVIKELTKEGF 303 (397)
T ss_dssp SSSSHHHHHTCCCSEEEECGGGGTT-SCCEEEEECSTTC-CCCT-------TSSCCSSTTCHHHHHHHHHHHHHHTSTTH
T ss_pred ccchhhhhhCCCCCeeeeccccCCC-cCeEEEEEchHhc-ccCC-------CCcCCCCCCCHHHHHHHHHHHHHHHhCCH
Confidence 8766667778889999999999977 7999999998876 5431 24567889999999999999998877788
Q ss_pred HHHHHHHHHHHHhhhhhcc-CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEE
Q 010250 401 VEQVNKIAPKFQDGVKAFS-DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMM 478 (514)
Q Consensus 401 ~~~~~~~~~~l~~~L~~l~-~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi 478 (514)
.++++++++++++.|+++. +.+.+..+++.|.++.+++.+.. ....+.+.|+++||++.+.+ +.+||
T Consensus 304 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~l~~~l~~~gi~v~~~~~~~iRi 372 (397)
T 2ord_A 304 LEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFREEV-----------SNREVATKCFENKLLVVPAGNNTIRF 372 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTTS-----------CHHHHHHHHHHTTEECEEETTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCceEEEEEEeEEEEEEECChH-----------HHHHHHHHHHHCCCEEccCCCCEEEE
Confidence 9999999999999998863 45666667888999999886421 14568889999999999874 67999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 479 SPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 479 ~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
+|++.++++|+++++++|++++++
T Consensus 373 s~~~~~~~e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 373 LPPLTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred ECCcCCCHHHHHHHHHHHHHHHhh
Confidence 999999999999999999988753
No 38
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=100.00 E-value=6e-44 Score=367.77 Aligned_cols=366 Identities=28% Similarity=0.502 Sum_probs=294.2
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
+|+++.+++|+++||.+|++||||.++.+++++||.+|+|.+|+.+++++...++.. .+.+...+++++++++++ .+
T Consensus 27 ~~~~~~~~~g~~~~d~~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~la~~~~-~~ 103 (395)
T 1vef_A 27 HDLLIVRGQGARVWDAEGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQT--LPTPMRGEFYRTLTAILP-PE 103 (395)
T ss_dssp CSSCEEEEEBTEEEETTSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTT--SCCHHHHHHHHHHHHTSC-TT
T ss_pred CCccEEecccCEEEeCCCCEEEEccCccccccCCCCCHHHHHHHHHHHHhCCCCccc--cCCHHHHHHHHHHHHhcC-CC
Confidence 788899999999999999999999999999999999999999999999875433222 245678899999999874 35
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
.+++++++||++|++.+++.++.+. ++++||+++++||+....+....+.......+.+....+..++.
T Consensus 104 ~~~v~~~~gg~~a~~~al~~~~~~~------~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~----- 172 (395)
T 1vef_A 104 LNRVFPVNSGTEANEAALKFARAHT------GRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY----- 172 (395)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHH------SCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-----
T ss_pred cCEEEEcCcHHHHHHHHHHHHHHHh------CCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCC-----
Confidence 6799999999999999999875432 35689999999999876655555543222111111111111111
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G 321 (514)
.++++|++.+. +++++|+++|+++++|.+.++++++++|.++|++||++||+||+|+||++.|
T Consensus 173 -------------~d~~~l~~~i~----~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g 235 (395)
T 1vef_A 173 -------------NDVEALKRAVD----EETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTG 235 (395)
T ss_dssp -------------TCHHHHHHHCC----TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS
T ss_pred -------------CcHHHHHHHhc----cCEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCC
Confidence 12567777664 4689999999999999999999999999999999999999999999999888
Q ss_pred ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV 401 (514)
Q Consensus 322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~ 401 (514)
..+..+.+++.||+++|||++++| +|+|++++++++++.+.. ..++++++.++++++++.++|+.+.++++.
T Consensus 236 ~~~~~~~~~~~~d~~s~sK~~~~g-~~~G~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~a~~~al~~~~~~~~~ 307 (395)
T 1vef_A 236 KRFAFEHFGIVPDILTLAKALGGG-VPLGVAVMREEVARSMPK-------GGHGTTFGGNPLAMAAGVAAIRYLERTRLW 307 (395)
T ss_dssp SSSTHHHHTCCCSEEEECGGGGTT-SSCEEEEEEHHHHHTSCT-------TSSCCSSTTCHHHHHHHHHHHHHHHHHTTH
T ss_pred chhHhhhcCCCCCEEEEcccccCC-CceEEEEehHHHHhhhcc-------CCcCCCcCCCHHHHHHHHHHHHHHHhCCHH
Confidence 776677788889999999999987 899999999998877653 135578889999999999999988777789
Q ss_pred HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEeeC-CEEEEe
Q 010250 402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG-DNIMMS 479 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g-~~iRi~ 479 (514)
++++++++++++.|+++. .+.+..+++.|.++.+.+... ...+.+.|. ++||++.+.+ +.+||+
T Consensus 308 ~~~~~~~~~l~~~l~~~~-~~~~~~~~~~g~~~~~~~~~~-------------~~~l~~~l~~~~gi~v~~~~~~~iRi~ 373 (395)
T 1vef_A 308 ERAAELGPWFMEKLRAIP-SPKIREVRGMGLMVGLELKEK-------------AAPYIARLEKEHRVLALQAGPTVIRFL 373 (395)
T ss_dssp HHHHHHHHHHHHHHHTSC-CTTEEEEEEETTEEEEEESSC-------------SHHHHHHHHHHHCEECEESSTTEEEEC
T ss_pred HHHHHHHHHHHHHHHHhh-cCceEEEEEEEEEEEEEEcCh-------------HHHHHHHHHHHCCeEEecCCCCEEEEe
Confidence 999999999999998873 244555677888999988531 234778888 9999999864 679999
Q ss_pred CCCCCCHHHHHHHHHHHHHHH
Q 010250 480 PPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 480 p~~~~t~e~id~~~~~l~~~l 500 (514)
+++.+|++++++++++|++++
T Consensus 374 ~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 374 PPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp CCTTCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHh
Confidence 999999999999999998875
No 39
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=3.3e-42 Score=352.02 Aligned_cols=364 Identities=30% Similarity=0.533 Sum_probs=287.3
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
.|+++.+++|+++||.+|+.||||.++.+.+++||.+|++.+++.+++++....... .+.....++++.|+++++. .
T Consensus 10 ~~~~~~~~~g~~~~~~~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~--y~~~~~~~l~~~la~~~g~-~ 86 (375)
T 2eh6_A 10 LPVKFVRGKGVYLYDEEGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNL--YENPWQEELAHKLVKHFWT-E 86 (375)
T ss_dssp EEEEEEEEEBTEEEETTCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCTT--BCCHHHHHHHHHHHHTSSS-C
T ss_pred CCccEEeeecCEEEeCCCCEEEEcCCcccccccCCCCHHHHHHHHHHHHhccccCcc--cCCHHHHHHHHHHHhhcCC-C
Confidence 788999999999999999999999999887899999999999999998764322111 2345678899999998732 2
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
+++++++||++|++.++++++.+.. .+.+++++|++.+++||+....+...++.+....++.+..+.+..++.+
T Consensus 87 -~~v~~~~g~t~a~~~~~~~~~~~~~-~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 160 (375)
T 2eh6_A 87 -GKVFFANSGTESVEAAIKLARKYWR-DKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKLN---- 160 (375)
T ss_dssp -EEEEEESSHHHHHHHHHHHHHHHHH-HTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECTT----
T ss_pred -CeEEEeCchHHHHHHHHHHHHHHhc-cCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCCc----
Confidence 8999999999999999997654421 1235567999999999998776666555443222222111112111111
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G 321 (514)
++++|++.+. +++++|+++|+++++|.+.++++++++|.++|++||+++|+||+|+|||+.|
T Consensus 161 --------------d~~~l~~~l~----~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~ 222 (375)
T 2eh6_A 161 --------------DIDSVYKLLD----EETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTG 222 (375)
T ss_dssp --------------CHHHHHTTCC----TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS
T ss_pred --------------hHHHHHHHhc----CCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCC
Confidence 1466666553 4689999999999999998999999999999999999999999999999888
Q ss_pred ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV 401 (514)
Q Consensus 322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~ 401 (514)
..+..+.++..+|+++|||.+++| +++|++++++++++.+.. ..++.+++.++++++++.++|+.++ ++.
T Consensus 223 ~~~~~~~~~~~~d~~s~SK~~~~g-~~~G~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~--~~~ 292 (375)
T 2eh6_A 223 EFYAYQHFNLKPDVIALAKGLGGG-VPIGAILAREEVAQSFTP-------GSHGSTFGGNPLACRAGTVVVDEVE--KLL 292 (375)
T ss_dssp SSSGGGGGTCCCSEEEECGGGGTT-SCCEEEEEEHHHHTTCCT-------TSCCCSSTTCHHHHHHHHHHHHHHH--HHH
T ss_pred cchhhhhcCCCCCEEEEcccccCC-CCeEEEEEcHHHHhhhcC-------CCCCCCCCCCHHHHHHHHHHHHHHH--HHH
Confidence 666667778889999999999987 899999999998877653 1356788889999999999998775 678
Q ss_pred HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEeC
Q 010250 402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSP 480 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p 480 (514)
++++++++++++.|+++. . ..+++.|.++++++..+ ...+.+.|.++||.+.+.+ +.+|+++
T Consensus 293 ~~~~~~~~~l~~~L~~~~---~-~~~~~~g~~~~~~~~~~-------------~~~~~~~l~~~gi~~~~~~~~~iRi~~ 355 (375)
T 2eh6_A 293 PHVREVGNYFKEKLKELG---K-GKVKGRGLMLGLELERE-------------CKDYVLKALEKGLLINCTAGKVLRFLP 355 (375)
T ss_dssp HHHHHHHHHHHHHHHHTT---S-SEEEEETTEEEEECSSC-------------CHHHHHHHHHTTEECEEETTTEEEECC
T ss_pred HHHHHHHHHHHHHHHHHh---c-CCceEEEEEEEEEEcCc-------------HHHHHHHHHHCCCEEecCCCCEEEEEC
Confidence 899999999999998762 1 34567788888887531 2347788889999999864 6799999
Q ss_pred CCCCCHHHHHHHHHHHHHH
Q 010250 481 PFIMSPEEVDELISKYGKA 499 (514)
Q Consensus 481 ~~~~t~e~id~~~~~l~~~ 499 (514)
++.++++++++++++|+++
T Consensus 356 ~~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 356 PLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp CTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHh
Confidence 9999999999999999875
No 40
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=7.4e-36 Score=310.92 Aligned_cols=348 Identities=16% Similarity=0.165 Sum_probs=261.9
Q ss_pred eEEE-eeeCcEEEeCCCCEEEEccCCcccccCC-CCCHHHHHHHHHHHhcCCc-c--ccccccCCchHHHHHHHHHHhcC
Q 010250 84 LVIE-KSEGSYVYDVNGKKYLDSLAGLWCTALG-GSEPRLVAAATAQLNTLPF-Y--HSFWNRTTKPSLDLAKELLEMFT 158 (514)
Q Consensus 84 ~~~~-~~~G~~~~d~dG~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~l~~~~~-~--~~~~~~~~~~~~ela~~L~~~~~ 158 (514)
.++. +++|+++|| ||++||||.+| .++| |.+|+|++|+.+++++... + +....+..+...+++++|++++
T Consensus 48 ~~~~~~~~g~~~~~-~g~~~id~~~~---~~lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~- 122 (427)
T 2w8t_A 48 IVMEQVKSPTEAVI-RGKDTILLGTY---NYMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFY- 122 (427)
T ss_dssp CCCSEEEETTEEEE-TTEEEEECSCC---CTTCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHH-
T ss_pred eeccccCCCceEee-CCceEEEEECc---ccccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHh-
Confidence 3567 999999999 99999999998 5799 6999999999999976321 1 2222345677889999999998
Q ss_pred cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC
Q 010250 159 ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH 238 (514)
Q Consensus 159 ~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 238 (514)
+.+++++++||++|+..+++.+. ++.+.|+++..+|+....++...+.... .+ |
T Consensus 123 --g~~~~i~~~sGs~a~~~al~~l~---------~~gd~vl~~~~~h~~~~~~~~~~g~~~~------------~~--~- 176 (427)
T 2w8t_A 123 --GTTGAIVFSTGYMANLGIISTLA---------GKGEYVILDADSHASIYDGCQQGNAEIV------------RF--R- 176 (427)
T ss_dssp --TCSEEEEESCHHHHHHHHHHHHS---------CTTCEEEEETTCCHHHHHHHHHSCSEEE------------EE--C-
T ss_pred --CCCceEEecCcHHHHHHHHHHhc---------CCCCEEEECCcccHHHHHHHHHcCCeeE------------Ee--C-
Confidence 34689999999999999988752 2334455566777776555554443211 01 1
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc-
Q 010250 239 YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF- 317 (514)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~- 317 (514)
++++++|++++.+..+.++++|+++++++++|.+.+ +++|+++|++||++||+||+|+++
T Consensus 177 ---------------~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~----l~~l~~l~~~~g~~li~Dea~~~~~ 237 (427)
T 2w8t_A 177 ---------------HNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAP----LKEMVAVAKKHGAMVLVDEAHSMGF 237 (427)
T ss_dssp ---------------TTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTTTTT
T ss_pred ---------------CCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccc
Confidence 012578888887532226899999999999999887 999999999999999999999964
Q ss_pred -ccccccceecccCCCCc----hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHH
Q 010250 318 -GRLGTMFGCDKYSIKPD----LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEAL 392 (514)
Q Consensus 318 -gr~G~~~~~~~~gv~pD----iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal 392 (514)
+++|.. ..+++++.|| +.++||+++ .+.|++++++++++.+.... . ...++++.+|+.++++.++|
T Consensus 238 ~~~~g~~-~~~~~~~~~~~di~~~s~sK~~g---~~gG~v~~~~~l~~~l~~~~---~--~~~~~~~~~~~~~aa~~~al 308 (427)
T 2w8t_A 238 FGPNGRG-VYEAQGLEGQIDFVVGTFSKSVG---TVGGFVVSNHPKFEAVRLAC---R--PYIFTASLPPSVVATATTSI 308 (427)
T ss_dssp SSTTSCC-HHHHTTCTTCCSEEEEESSSTTC---SCCEEEEECCTTGGGGGGTC---H--HHHSSCCCCHHHHHHHHHHH
T ss_pred cCCCCCc-hHhhcCCCcCCcEEEecchhhhc---cCCCEEEeCHHHHHHHHHhc---c--cccccCCCCHHHHHHHHHHH
Confidence 333433 4566777766 558999996 45699999999988886421 1 12346678899999999999
Q ss_pred HHHhh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE
Q 010250 393 KIYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR 470 (514)
Q Consensus 393 ~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~ 470 (514)
+.+++ +++.++++++++++++.|+++ +.++.. .+ .|.++.+.+.+.. ....+.+.|+++||++.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~~~~~-----------~~~~l~~~L~~~Gi~v~ 374 (427)
T 2w8t_A 309 RKLMTAHEKRERLWSNARALHGGLKAM-GFRLGT--ETCDSAIVAVMLEDQE-----------QAAMMWQALLDGGLYVN 374 (427)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHHHHHHH-TCEESC--SSCCSSEEEEEESSHH-----------HHHHHHHHHHHTTEECE
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHc-CCcccC--CCCCCCEEEEEECCHH-----------HHHHHHHHHHHCCeEEe
Confidence 98865 578899999999999999886 332221 22 5778888875311 24568899999999998
Q ss_pred eeC--------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 471 VSG--------DNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 471 ~~g--------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
+.. +.|||+++..+|++||++++++|+++++++.
T Consensus 375 ~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~~ 416 (427)
T 2w8t_A 375 MARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAVG 416 (427)
T ss_dssp EECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHT
T ss_pred eeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 752 3699999999999999999999999987643
No 41
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=5.9e-36 Score=310.97 Aligned_cols=359 Identities=10% Similarity=0.030 Sum_probs=258.7
Q ss_pred CCeEEEeeeCcEEEeCC--CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-
Q 010250 82 HPLVIEKSEGSYVYDVN--GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT- 158 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~d--G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~- 158 (514)
.+++..+++|+++||.+ |++||||..+ .+..+.+|+|++|+.++++...+.+.. ...+...++++++.+.++
T Consensus 41 ~~~~~~~g~g~~~~d~~~~g~~~i~~~~~---~~~~~~~~~v~~a~~~~~~~~~~~y~~--~~~~l~~~l~~~l~~~~g~ 115 (421)
T 3l8a_A 41 TTRPDRLNQFTYKWKTSENNPELLQMWVA---DMDFLPVPEIKEAIINYGREHIFGYNY--FNDDLYQAVIDWERKEHDY 115 (421)
T ss_dssp SCCCCCTTTTBTTTGGGTTCTTCEECCSS---CCCSCCCHHHHHHHHHHHHHCCSSCBC--CCHHHHHHHHHHHHHHHCC
T ss_pred CcccccCCCCCccccccCCCCCeeecccC---CCCCCCCHHHHHHHHHHHhcCCcCCCC--CCHHHHHHHHHHHHHHhCC
Confidence 45677899999999999 8999999766 445558999999999999864332221 124555667777777653
Q ss_pred cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC
Q 010250 159 ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH 238 (514)
Q Consensus 159 ~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 238 (514)
..+.++|+|++||+||++.|++.++ ..+++||+.+++||+........+.... ...+.. ...
T Consensus 116 ~~~~~~v~~~~g~~ea~~~a~~~~~--------~~gd~Vi~~~~~y~~~~~~~~~~g~~~~-~~~~~~---------~~~ 177 (421)
T 3l8a_A 116 AVVKEDILFIDGVVPAISIALQAFS--------EKGDAVLINSPVYYPFARTIRLNDHRLV-ENSLQI---------ING 177 (421)
T ss_dssp CCCGGGEEEESCHHHHHHHHHHHHS--------CTEEEEEEEESCCHHHHHHHHHTTEEEE-EEECEE---------ETT
T ss_pred CCCHHHEEEcCCHHHHHHHHHHHhc--------CCCCEEEECCCCcHHHHHHHHHCCCEEE-eccccc---------cCC
Confidence 1356789999999999999999874 3457899999999997654433222111 000000 000
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc
Q 010250 239 YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 318 (514)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g 318 (514)
.|. .++++|++.+.+ +++++|+++++++++| +.+++++|++|+++|++||++||+||+|++|+
T Consensus 178 ~~~-------------~d~~~le~~i~~---~~~~~vil~~p~nptG-~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~ 240 (421)
T 3l8a_A 178 RFE-------------IDFEQLEKDIID---NNVKIYLLCSPHNPGG-RVWDNDDLIKIAELCKKHGVILVSDEIHQDLA 240 (421)
T ss_dssp EEE-------------CCHHHHHHHHHH---TTEEEEEEESSBTTTT-BCCCHHHHHHHHHHHHHHTCEEEEECTTTTCB
T ss_pred Cee-------------eCHHHHHHHhhc---cCCeEEEECCCCCCCC-CcCCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence 011 015788888763 3688899999999999 55677889999999999999999999999999
Q ss_pred cccccc-ee-----cccCCCCchhchhhhhcCCcccceeEEeC-HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHH
Q 010250 319 RLGTMF-GC-----DKYSIKPDLVSFAKALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEA 391 (514)
Q Consensus 319 r~G~~~-~~-----~~~gv~pDiv~~sK~l~gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aa 391 (514)
++|..+ .+ +..+..+++.+++|+++.+++|+|+++++ +++++.+... .....++++|+++++++.++
T Consensus 241 ~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~------~~~~~~~~~n~~~~~a~~aa 314 (421)
T 3l8a_A 241 LFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYR------QLANNQHEVPTVGMIATQAA 314 (421)
T ss_dssp CTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHH------HHHTTCSCCCHHHHHHHHHH
T ss_pred cCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHH------HHhcccCCCCHHHHHHHHHH
Confidence 988532 11 22344466778999998333899999998 8998888642 12334568899999999999
Q ss_pred HHHHhh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEE-EEEccCCCCCCCCCCccchHHHHHHHHHH-CCc
Q 010250 392 LKIYKE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILG-TEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGM 467 (514)
Q Consensus 392 l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv 467 (514)
++..++ +++.++++++.+++++.|+++ +.+..+++.|.++. +++...... ...+.+.|++ +||
T Consensus 315 l~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~i~~~~~~~~~~~~v~~~~~~~~----------~~~l~~~l~~~~gi 381 (421)
T 3l8a_A 315 FQYGKPWLEELKTVIEGNIKLVIKELEAK---TKIKVMEPEGTYLVWLDFSAYAIA----------QPQLSEKLQNEAKV 381 (421)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHHHHH---CSCEEECCSBSSEEEEECGGGTCC----------TTHHHHHHHHTTCE
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHHhC---CCceEeCCCeeEEEEEeccccCCC----------HHHHHHHHHHhCCE
Confidence 985332 356677888888888888776 44556677777766 777642111 2246778875 599
Q ss_pred EEEee-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 468 LVRVS-------GDNIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 468 ~~~~~-------g~~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
++.++ .+.+||+++ +++++|++++++|+++++
T Consensus 382 ~v~~g~~f~~~~~~~iRi~~~--~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 382 VLNDGAHFGKEGKYFARLNVA--TPKNTVQEALSRIISVFG 420 (421)
T ss_dssp ECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHC-
T ss_pred EEECchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 99863 367999976 699999999999998874
No 42
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=3.9e-33 Score=286.79 Aligned_cols=349 Identities=17% Similarity=0.262 Sum_probs=259.3
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCC-CCCHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhc
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALG-GSEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMF 157 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~ 157 (514)
.|..+.+++|.+++| ||++||||.++ +++| |++|++.+++.+++.+.... +.+..+..+...++++.+++++
T Consensus 26 ~~~~~~~~~g~~v~~-~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 101 (399)
T 3tqx_A 26 SERIITSPQNAEIKV-GEKEVLNFCAN---NYLGLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFL 101 (399)
T ss_dssp CCCCBCSCSSSEEEE-TTEEEEECSSC---CTTSCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHH
T ss_pred ccccccCCCCceEee-CCeeEEEeecc---CcccccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHH
Confidence 345678999999999 99999999998 7899 79999999999999764332 1222345667789999999998
Q ss_pred CcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC
Q 010250 158 TASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP 237 (514)
Q Consensus 158 ~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 237 (514)
+ .++.+++++|++|+..+++.+. .+++.|++ ...+|+.........+..... ++..
T Consensus 102 ~---~~~~i~~~sGt~a~~~~l~~~~--------~~gd~v~~-~~~~~~~~~~~~~~~g~~~~~------------~~~~ 157 (399)
T 3tqx_A 102 G---TDDTILYSSCFDANGGLFETLL--------GPEDAIIS-DELNHASIIDGIRLCKAQRYR------------YKNN 157 (399)
T ss_dssp T---CSEEEEESCHHHHHHTTHHHHC--------CTTCEEEE-ETTCCHHHHHHHHSCCSEEEE------------ECTT
T ss_pred C---CCcEEEECchHHHHHHHHHHhc--------CCCCEEEE-CCcccHHHHHHHHHcCCceeE------------eCCC
Confidence 3 3568888899999999998763 22345555 555556554444444432211 1110
Q ss_pred CcccCCCCCCChhHHHHHHHHHHHHHHHHhCC--CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc
Q 010250 238 HYWRYAHPGETEEEYSTRLANNLEDLILKEGP--ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 315 (514)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~--~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t 315 (514)
+.++|++++.+... .++++|+++++++++|.+.+ +++|.++|++||+++|+||+|.
T Consensus 158 ------------------d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~ 215 (399)
T 3tqx_A 158 ------------------AMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIAD----LKSICDLADKYNALVMVDDSHA 215 (399)
T ss_dssp ------------------CTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTT
T ss_pred ------------------CHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCcc
Confidence 13567777765322 26889999999999999887 9999999999999999999994
Q ss_pred -Cc-ccccccceecccCC--CCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHH
Q 010250 316 -AF-GRLGTMFGCDKYSI--KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAI 389 (514)
Q Consensus 316 -G~-gr~G~~~~~~~~gv--~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~ 389 (514)
|+ ++.|.. ..+.+++ .+|++ +++|+++ | .+.|++++++++++.+.... .....+.+.++++++++.
T Consensus 216 ~~~~~~~~~~-~~~~~~~~~~~di~~~s~sK~~~-g-~~gG~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 287 (399)
T 3tqx_A 216 VGFIGENGRG-TPEYCGVADRVDILTGTLGKALG-G-ASGGYTSGHKEIIEWLRNRS-----RPYLFSNTVAPVIVATSL 287 (399)
T ss_dssp TTTSSTTSCC-HHHHHTCTTCCSEEEEESSSSSC-S-SCCEEEEECHHHHHHHHHHC-----HHHHSSCCCCHHHHHHHH
T ss_pred ccccCCCCCc-hHHhhCCCCCCcEEEecchHhcc-c-CceEEEEcCHHHHHHHHHhC-----cceeccCCCcHHHHHHHH
Confidence 54 444432 4566676 68988 7899998 4 57799999999998887421 112235567899999999
Q ss_pred HHHHHH-h-hccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCc
Q 010250 390 EALKIY-K-ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM 467 (514)
Q Consensus 390 aal~~~-~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 467 (514)
++++.+ + .+++.++++++++++.+.|+++ ..+.. .+.|.++.+.+.+.. ....+.+.|.++||
T Consensus 288 ~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~---~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~gi 352 (399)
T 3tqx_A 288 KVLELLKTEGPQLRKQLQENSRYFRAGMEKL-GFQLV---PGNHPIIPVMLGDAQ-----------LATNMADHLLQEGI 352 (399)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH-TCCBC---CCSSSEEEEEEECHH-----------HHHHHHHHHHHTTE
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHHHHHc-CCCcC---CCCCCEEEEEeCCHH-----------HHHHHHHHHHHCCC
Confidence 999987 3 2567889999999999999887 33322 456778888775321 24568899999999
Q ss_pred EEEee-------C-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 468 LVRVS-------G-DNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 468 ~~~~~-------g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
++.+. + +.+||+++..+|++++++++++|+++++++
T Consensus 353 ~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 353 YVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp ECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred EEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence 99853 2 369999999999999999999999998754
No 43
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=100.00 E-value=1.5e-34 Score=299.22 Aligned_cols=339 Identities=17% Similarity=0.179 Sum_probs=253.7
Q ss_pred EeeeCcEEEeCCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCc---cccccccCCchHHHHHHHHHHhcCcCCC
Q 010250 87 EKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPF---YHSFWNRTTKPSLDLAKELLEMFTASKM 162 (514)
Q Consensus 87 ~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~---~~~~~~~~~~~~~ela~~L~~~~~~~~~ 162 (514)
.++.+.+++|.+|++||||.++ +++|+ .||+|++|+.+++++... .+....+..+...++++++++++ +.
T Consensus 46 ~~~~~~~~~~~~g~~~ld~~s~---~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~---g~ 119 (409)
T 3kki_A 46 KNGKHLVLGKQASPDDIILQSN---DYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFT---GF 119 (409)
T ss_dssp TTSSCTTCCCCCCTTSEECCCS---CTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHH---TC
T ss_pred cCCCeeeeCCCCCCceEEeecc---CccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHh---CC
Confidence 3667788899999999999887 66777 689999999999987432 22233345566788999999997 34
Q ss_pred CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccC
Q 010250 163 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRY 242 (514)
Q Consensus 163 ~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (514)
+.++++++|++|++.+++... ++.+.|+++..+|+....++...+..... ++.
T Consensus 120 ~~~i~~~sGt~a~~~~l~~~~---------~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~------------~~~------ 172 (409)
T 3kki_A 120 DECLLSQSGWNANVGLLQTIC---------QPNTNVYIDFFAHMSLWEGARYANAQAHP------------FMH------ 172 (409)
T ss_dssp SEEEEESCHHHHHHHHHHHHC---------CTTCEEEEETTSCHHHHHHHHHTTCEEEE------------ECT------
T ss_pred CeEEEecchHHHHHHHHHHhc---------CCCCEEEECCCcCHHHHHHHHHcCCeEEE------------ecC------
Confidence 578889999999999998763 23344455666676665555444432210 000
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC--cccc
Q 010250 243 AHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA--FGRL 320 (514)
Q Consensus 243 ~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG--~gr~ 320 (514)
.++++|++++.+. ++++|+++++++++|.+.+ +++|+++|++||++||+||+|++ +|++
T Consensus 173 ------------~d~~~le~~l~~~---~~~~vi~~~~~nptG~~~~----l~~l~~la~~~~~~li~De~~~~g~~g~~ 233 (409)
T 3kki_A 173 ------------NNCDHLRMLIQRH---GPGIIVVDSIYSTLGTIAP----LAELVNISKEFGCALLVDESHSLGTHGPN 233 (409)
T ss_dssp ------------TCHHHHHHHHHHH---CSCEEEEESBCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTTTTTSSGG
T ss_pred ------------CCHHHHHHHHHhc---CCeEEEECCCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCccccccCCC
Confidence 1257888888753 2479999999999998887 99999999999999999999997 7888
Q ss_pred cccceecccCC--CCch--hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh
Q 010250 321 GTMFGCDKYSI--KPDL--VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK 396 (514)
Q Consensus 321 G~~~~~~~~gv--~pDi--v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~ 396 (514)
|..+. ..+++ .+|+ .++||++++| .|++++++++++.+.... ....++...++++++++.++++.++
T Consensus 234 g~~~~-~~~~~~~~~di~~~s~sK~~~~~---gg~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~aa~~aal~~~~ 304 (409)
T 3kki_A 234 GAGLL-AELGLTREVHFMTASLAKTFAYR---AGAIWCNNEVNRCVPFIS-----YPAIFSSTLLPYEAAGLETTLEIIE 304 (409)
T ss_dssp GCCHH-HHHTCGGGCSEEEEESSSTTCSS---CEEEEESSSGGGTHHHHC-----HHHHHSBCCCHHHHHHHHHHHHHHH
T ss_pred CCcch-hhcCCCCCCCEEEeecchhhCCC---ceEEEECHHHHHHHHHhC-----cCccccCCCcHHHHHHHHHHHHHHh
Confidence 76544 55566 4677 5789999876 489999999888776421 1112234478899999999999886
Q ss_pred h-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---
Q 010250 397 E-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--- 472 (514)
Q Consensus 397 ~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--- 472 (514)
+ +++.++++++++++++.|+++ ...+ .+.|.++++.+.+.. ....+.+.|+++||++.+.
T Consensus 305 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~----~~~~~~~~~~~~~~~-----------~~~~~~~~L~~~Gv~v~~~~~~ 368 (409)
T 3kki_A 305 SADNRRQHLDRMARKLRIGLSQL-GLTI----RSESQIIGLETGDER-----------NTEKVRDYLESNGVFGSVFCRP 368 (409)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHTT-TCCC----CCSSSEEEEEEESHH-----------HHHHHHHHHHHTTEECEEECTT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHc-CCcc----CCCCCEEEEEeCCHH-----------HHHHHHHHHHHCCceEeeeCCC
Confidence 5 467889999999999999876 3222 246788888875421 2456888999999998642
Q ss_pred ----C-CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 473 ----G-DNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 473 ----g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
+ +.|||+++..+|+++|++++++|+++++.
T Consensus 369 ~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 369 ATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp SSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhc
Confidence 2 46999999999999999999999998864
No 44
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=1.3e-33 Score=291.07 Aligned_cols=350 Identities=19% Similarity=0.241 Sum_probs=257.4
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCccc---cccccCCchHHHHHHHHHHhc
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFYH---SFWNRTTKPSLDLAKELLEMF 157 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~~---~~~~~~~~~~~ela~~L~~~~ 157 (514)
.|.++.+++|+++||.||++||||.++ +++|| .+|++.+++.+++++....+ .+..+..+...++++.|++++
T Consensus 27 ~~~~~~~~~g~~~~~~~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 103 (401)
T 1fc4_A 27 EERIITSAQQADITVADGSHVINFCAN---NYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL 103 (401)
T ss_dssp CCCCBCSCSSSEEEBTTSCEEEECCCS---CTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH
T ss_pred eeeeeccCCCceEEeeCCccEEEeecc---CcccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHh
Confidence 567789999999999999999999988 67997 89999999999987633221 111123566789999999998
Q ss_pred CcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC
Q 010250 158 TASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP 237 (514)
Q Consensus 158 ~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 237 (514)
+ .++.+++++|++|++.+++.+. ++.+.|.+...+|+....++...|.... .++.
T Consensus 104 g---~~~~i~~~sGs~a~~~~~~~~~---------~~gd~v~~~~~~~~~~~~~~~~~g~~~~------------~~~~- 158 (401)
T 1fc4_A 104 G---MEDAILYSSCFDANGGLFETLL---------GAEDAIISDALNHASIIDGVRLCKAKRY------------RYAN- 158 (401)
T ss_dssp T---CSEEEEESCHHHHHHTTHHHHC---------CTTCEEEEETTCCHHHHHHHHTSCSEEE------------EECT-
T ss_pred C---CCcEEEeCChHHHHHHHHHHHc---------CCCCEEEEcchhHHHHHHHHHHcCCceE------------EECC-
Confidence 3 3367788999999999988763 2223444555566655444433332211 1110
Q ss_pred CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCC--cEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc
Q 010250 238 HYWRYAHPGETEEEYSTRLANNLEDLILKEGPE--TIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 315 (514)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~--~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t 315 (514)
.+.++|++++.+..++ ++++|+++++++++|.+.+ +++|.++|++||+++|+||+|.
T Consensus 159 -----------------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~li~De~~~ 217 (401)
T 1fc4_A 159 -----------------NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIAN----LKGVCDLADKYDALVMVDDSHA 217 (401)
T ss_dssp -----------------TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECC----HHHHHHHHHHTTEEEEEECTTT
T ss_pred -----------------CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCC----HHHHHHHHHHcCCEEEEECccc
Confidence 0146778777643211 5788999999999998887 9999999999999999999995
Q ss_pred -Cc-ccccccceecccCCC--Cchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHH
Q 010250 316 -AF-GRLGTMFGCDKYSIK--PDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAI 389 (514)
Q Consensus 316 -G~-gr~G~~~~~~~~gv~--pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~ 389 (514)
|+ +++|..+ .+.+++. .|++ +++|.++|+. .|++++++++++.+.... ..+..+++.++++++++.
T Consensus 218 ~g~~~~~g~~~-~~~~~~~~~~di~~~s~sK~~~~~~--gG~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~a~~ 289 (401)
T 1fc4_A 218 VGFVGENGRGS-HEYCDVMGRVDIITGTLGKALGGAS--GGYTAARKEVVEWLRQRS-----RPYLFSNSLAPAIVAASI 289 (401)
T ss_dssp TTTSSTTSCCH-HHHTTCTTCCSEEEEESSSTTCSSS--CEEEEECHHHHHHHHHHC-----HHHHHSCCCCHHHHHHHH
T ss_pred ccccCCCCCcc-HHHcCCCcCCcEEEecchhhccCCC--CEEEEcCHHHHHHHHHhC-----cCceeCCCCCHHHHHHHH
Confidence 87 3566543 3345554 4777 7899997652 589999999998886421 112346678999999999
Q ss_pred HHHHHHhh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcE
Q 010250 390 EALKIYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGML 468 (514)
Q Consensus 390 aal~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~ 468 (514)
++|+.+++ +++.++++++++++.+.|+++ ...+. .+.|.++.+.+.+.. ....+.+.|.++||+
T Consensus 290 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~---~~~~~~~~~~~~~~~-----------~~~~l~~~l~~~gi~ 354 (401)
T 1fc4_A 290 KVLEMVEAGSELRDRLWANARQFREQMSAA-GFTLA---GADHAIIPVMLGDAV-----------VAQKFARELQKEGIY 354 (401)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHHHHT-TCCBC---CSSSSEEEEEEECHH-----------HHHHHHHHHHHTTEE
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCccc---CCCCCEEEEEcCChH-----------HHHHHHHHHHHCCcE
Confidence 99998764 467889999999999999886 33332 357788888875311 245688899999999
Q ss_pred EEeeC--------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 469 VRVSG--------DNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 469 ~~~~g--------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+.++. +.+||+++..+|++++++++++|+++++++
T Consensus 355 v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 397 (401)
T 1fc4_A 355 VTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQL 397 (401)
T ss_dssp CCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred EeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 98652 359999998899999999999999988654
No 45
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=9.8e-32 Score=275.57 Aligned_cols=356 Identities=11% Similarity=0.062 Sum_probs=249.9
Q ss_pred eEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCC
Q 010250 84 LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKM 162 (514)
Q Consensus 84 ~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~ 162 (514)
++..+++|+++||.+|++||||..+ .+..+.+|+|.+|+.+++.+..+.+.. ...+...++++.+.+.++ +...
T Consensus 11 ~~~~~~~g~~~~d~~g~~~i~~~~~---~~~~~~~~~v~~a~~~~~~~~~~~y~~--~~~~l~~~la~~l~~~~g~~~~~ 85 (391)
T 3dzz_A 11 HVPKRQGNSIKWGVLKEKELPMWIA---EMDFKIAPEIMASMEEKLKVAAFGYES--VPAEYYKAVADWEEIEHRARPKE 85 (391)
T ss_dssp SCCCCCTTBTTTTTCCTTCEECCSS---CCSSCCCHHHHHHHHHHHTTCCCCCBC--CCHHHHHHHHHHHHHHHSCCCCG
T ss_pred hhccCCCCccceeccCCCceecccc---CCCCCCCHHHHHHHHHHHhcCcCCCCC--CCHHHHHHHHHHHHHHhCCCCCH
Confidence 5677899999999999999999877 444458999999999999764322111 133455667777776653 1346
Q ss_pred CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC---CCc
Q 010250 163 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC---PHY 239 (514)
Q Consensus 163 ~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~---~~~ 239 (514)
+++++++||++|++.+++.+. .++++|++.+++||+........+.... .++. ...
T Consensus 86 ~~i~~~~g~~~a~~~~~~~l~--------~~gd~vl~~~~~~~~~~~~~~~~g~~~~-------------~~~~~~~~~~ 144 (391)
T 3dzz_A 86 DWCVFASGVVPAISAMVRQFT--------SPGDQILVQEPVYNMFYSVIEGNGRRVI-------------SSDLIYENSK 144 (391)
T ss_dssp GGEEEESCHHHHHHHHHHHHS--------CTTCEEEECSSCCHHHHHHHHHTTCEEE-------------ECCCEEETTE
T ss_pred HHEEECCCHHHHHHHHHHHhC--------CCCCeEEECCCCcHHHHHHHHHcCCEEE-------------EeeeeecCCc
Confidence 799999999999999999873 3457899999999987544333222111 0111 000
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250 240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319 (514)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr 319 (514)
|. .++++|++.+.+ .++++|+++..++++|.+. +++.+++|.++|++||+++|+||+|+++++
T Consensus 145 ~~-------------~d~~~l~~~l~~---~~~~~v~i~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~ 207 (391)
T 3dzz_A 145 YS-------------VNWADLEEKLAT---PSVRMMVFCNPHNPIGYAW-SEEEVKRIAELCAKHQVLLISDEIHGDLVL 207 (391)
T ss_dssp EE-------------CCHHHHHHHHTS---TTEEEEEEESSBTTTTBCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCBC
T ss_pred ee-------------ecHHHHHHHHhc---cCceEEEEECCCCCCCccc-CHHHHHHHHHHHHHCCCEEEEecccccccC
Confidence 00 115778877752 3567777777788888765 557799999999999999999999999988
Q ss_pred ccc-cceecccCC-CCc----hhchhhhhcCCcccceeEEeC-HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHH
Q 010250 320 LGT-MFGCDKYSI-KPD----LVSFAKALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEAL 392 (514)
Q Consensus 320 ~G~-~~~~~~~gv-~pD----iv~~sK~l~gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal 392 (514)
.|. ......++. .+| +.+++|+++.+++++|+++++ +++++.+... .....+++.++++++++.+++
T Consensus 208 ~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l 281 (391)
T 3dzz_A 208 TDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEES------FFLAGIGEPNLLAIPAAIAAY 281 (391)
T ss_dssp SSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHH------HHHHTCSSCCTTHHHHHHHHH
T ss_pred CCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHH------HHhhccCCCCHHHHHHHHHHH
Confidence 875 333333332 277 457899997333899999997 8998888642 122346678899999999888
Q ss_pred HHHh--hccHHHHHHHHHHHHHhhhhh-ccCCCceeEEEeee-eeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCc
Q 010250 393 KIYK--ERNIVEQVNKIAPKFQDGVKA-FSDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGM 467 (514)
Q Consensus 393 ~~~~--~~~~~~~~~~~~~~l~~~L~~-l~~~~~~~~v~g~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv 467 (514)
+... .++..++++++.+++.+.|++ +.. +......+ .+..+.+..... ....+.+.|+ ++||
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~gi 348 (391)
T 3dzz_A 282 EEGHDWLRELKQVLRDNFAYAREFLAKEVPE---VKVLDSNASYLAWVDISALGM----------NAEDFCKYLREKTGL 348 (391)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHHHHHCTT---SEECCCCBSSEEEEECGGGCS----------CHHHHHHHHHHHHCE
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHhhCCC---cEEeccCceEEEEEehhhcCC----------CHHHHHHHHHHhCCE
Confidence 7632 235677788888888888887 432 22222333 344566654211 1456788885 8999
Q ss_pred EEEeeC-------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 468 LVRVSG-------DNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 468 ~~~~~g-------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
++.++. +.+|++++ +++++|++++++|+++++++
T Consensus 349 ~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 349 IISAGNGYRGNGHEFVRINLA--CPKELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp ECEESGGGCTTGGGEEEEECC--SCHHHHHHHHHHHHHHHHTC
T ss_pred EEeCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 998742 57999965 79999999999999988654
No 46
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=4.2e-31 Score=272.03 Aligned_cols=348 Identities=17% Similarity=0.210 Sum_probs=254.3
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhc
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMF 157 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~ 157 (514)
.|+++.+++|+++| .||+.||||.+| .++|+ .+|++.+++.+++++.... +....+..+...++++++++++
T Consensus 26 ~~~~~~~~~g~~~~-~~g~~~idl~~~---~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 101 (398)
T 3a2b_A 26 YFRPIQSKQDTEVK-IDGRRVLMFGSN---SYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYV 101 (398)
T ss_dssp SSCCBCSCSSSEEE-ETTEEEEECSCS---CTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH
T ss_pred ceeeecCCCCceEE-ECCceEEEeecc---cccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHh
Confidence 66788999999999 999999999988 45888 8999999999998763321 1122335577788999999987
Q ss_pred CcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC
Q 010250 158 TASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP 237 (514)
Q Consensus 158 ~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 237 (514)
+ .+++++++||++|++.+++.+. .+++.|++.++. |+.....+...|.... .++..
T Consensus 102 g---~~~v~~~~ggt~a~~~~~~~~~--------~~gd~V~~~~p~-~~~~~~~~~~~g~~~~------------~v~~~ 157 (398)
T 3a2b_A 102 G---KEAAILFSTGFQSNLGPLSCLM--------GRNDYILLDERD-HASIIDGSRLSFSKVI------------KYGHN 157 (398)
T ss_dssp T---CSEEEEESSHHHHHHHHHHHSS--------CTTCEEEEETTC-CHHHHHHHHHSSSEEE------------EECTT
T ss_pred C---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEECCcc-CHHHHHHHHHcCCceE------------EeCCC
Confidence 3 4699999999999999998763 233456665555 4544444433332211 11111
Q ss_pred CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC-
Q 010250 238 HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA- 316 (514)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG- 316 (514)
+.++|++++.+..++++++|+++++++++|.+.+ +++|.++|++||+++|+||+|+.
T Consensus 158 ------------------d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~----~~~l~~~~~~~~~~li~De~~~~~ 215 (398)
T 3a2b_A 158 ------------------NMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVN----LPELTSIANEFDAAVMVDDAHSLG 215 (398)
T ss_dssp ------------------CHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTTTT
T ss_pred ------------------CHHHHHHHHHhhccCCceEEEEeCCCCCCCCccC----HHHHHHHHHHcCcEEEEECCCccc
Confidence 1478888886432226789999999999998876 99999999999999999999973
Q ss_pred -cccccccceecccCCC--Cchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHH
Q 010250 317 -FGRLGTMFGCDKYSIK--PDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEA 391 (514)
Q Consensus 317 -~gr~G~~~~~~~~gv~--pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aa 391 (514)
+++.+... .+.+++. +|++ +++|.++..+ |++++++++++.+... ...+..+...+++.++++.++
T Consensus 216 ~~~~~~~~~-~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~a~~~~~ 286 (398)
T 3a2b_A 216 VIGHKGAGT-ASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDADVIDFLKHN-----ARSVMFSASMTPASVASTLKA 286 (398)
T ss_dssp TSSGGGCCH-HHHHTCGGGCSEEEEESSSTTCSSC---EEEEECHHHHHHHHHH-----CHHHHSSBCCCHHHHHHHHHH
T ss_pred ccCCCCCch-HhhcCCCcCCeEEEecccccccCCC---cEEEeCHHHHHHHHHh-----cccceecCCCCHHHHHHHHHH
Confidence 34444332 3445554 6888 7899987422 8899999998888641 012345666778888788888
Q ss_pred HHHHhh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE
Q 010250 392 LKIYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR 470 (514)
Q Consensus 392 l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~ 470 (514)
|+.++. ++..++++++++++.+.|+++ ...+. .+.|.++++.+.+.. ....+.+.|.++||.+.
T Consensus 287 l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~---~~~g~~~~~~~~~~~-----------~~~~l~~~l~~~gi~v~ 351 (398)
T 3a2b_A 287 LEIIQNEPEHIEKLWKNTDYAKAQLLDH-GFDLG---ATESPILPIFIRSNE-----------KTFWVTKMLQDDGVFVN 351 (398)
T ss_dssp HHHHHHCTHHHHHHHHHHHHHHHHHHHT-TCCBC---SCCSSEEEEECCCHH-----------HHHHHHHHHHHTTEECE
T ss_pred HHHHhhCHHHHHHHHHHHHHHHHHHHhc-CCCcC---CCCCCEEEEEcCCHH-----------HHHHHHHHHHHCCcEEE
Confidence 887654 367889999999999999886 33332 345778888774210 24568889999999998
Q ss_pred eeC--------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 471 VSG--------DNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 471 ~~g--------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
++. +.+|++++..+|++++++++++|+++++++
T Consensus 352 ~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~ 392 (398)
T 3a2b_A 352 PVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQA 392 (398)
T ss_dssp EECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred eeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 752 569999988889999999999999998754
No 47
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=4.1e-31 Score=270.66 Aligned_cols=343 Identities=17% Similarity=0.225 Sum_probs=251.7
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCC-CCCHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhc
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALG-GSEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMF 157 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~ 157 (514)
.|.++.+++|+++| .+|++||||.++ .++| +.+|++.+++.+++++.... +.+..+..+...++++.|++++
T Consensus 22 ~~~~~~~~~g~~~~-~~g~~~id~~~~---~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~ 97 (384)
T 1bs0_A 22 RRYPVAQGAGRWLV-ADDRQYLNFSSN---DYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL 97 (384)
T ss_dssp CCCCCSBCSSSEEE-ETTEEEEECSCC---CTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH
T ss_pred ccccccCCCCceEE-ECCceEEEeecc---CccCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh
Confidence 56778999999999 799999999988 4588 58999999999998763221 1121234577789999999998
Q ss_pred CcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC
Q 010250 158 TASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP 237 (514)
Q Consensus 158 ~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 237 (514)
+ .++++++++|++|+..+++.+. ++.+.|+++..+|+.+...+...|.... .++..
T Consensus 98 g---~~~~i~~~sGt~a~~~~~~~~~---------~~gd~v~~~~~~~~~~~~~~~~~g~~~~------------~~~~~ 153 (384)
T 1bs0_A 98 G---YSRALLFISGFAANQAVIAAMM---------AKEDRIAADRLSHASLLEAASLSPSQLR------------RFAHN 153 (384)
T ss_dssp T---CSEEEEESCHHHHHHHHHHHHC---------CTTCEEEEETTCCHHHHHHHHTSSSEEE------------EECTT
T ss_pred C---CCcEEEeCCcHHHHHHHHHHhC---------CCCcEEEEcccccHHHHHHHHHcCCCEE------------EeCCC
Confidence 3 4578899999999999998752 2334556666777776555544443211 11110
Q ss_pred CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-C
Q 010250 238 HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-A 316 (514)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G 316 (514)
+.++|++++.+.. +.+++|+++++++++|.+.+ +++|.++|++||+++|+||+|. |
T Consensus 154 ------------------d~~~l~~~l~~~~-~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~~~ 210 (384)
T 1bs0_A 154 ------------------DVTHLARLLASPC-PGQQMVVTEGVFSMDGDSAP----LAEIQQVTQQHNGWLMVDDAHGTG 210 (384)
T ss_dssp ------------------CHHHHHHHHHSCC-SSCEEEEEESBCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTTTT
T ss_pred ------------------CHHHHHHHHHhcC-CCCeEEEEeCCCCCCCCccC----HHHHHHHHHHcCcEEEEECCcccc
Confidence 1477888876432 23689999999999999887 9999999999999999999996 4
Q ss_pred c-ccccccceecccCCCCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHH
Q 010250 317 F-GRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALK 393 (514)
Q Consensus 317 ~-gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~ 393 (514)
+ +++|..+. +.++..+|++ +++|.++. +.|++++++++++.+.... .....+++.++++++++.++|+
T Consensus 211 ~~~~~~~~~~-~~~~~~~di~~~s~sK~~~~---~GG~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~al~ 281 (384)
T 1bs0_A 211 VIGEQGRGSC-WLQKVKPELLVVTFGKGFGV---SGAAVLCSSTVADYLLQFA-----RHLIYSTSMPPAQAQALRASLA 281 (384)
T ss_dssp TSSGGGCCHH-HHTTCCCSEEEEESSSTTSS---CCEEEEECHHHHHHHHHHC-----HHHHSSBCCCHHHHHHHHHHHH
T ss_pred eecCCCCchH-HhcCCCCcEEEeeccchhhc---cCcEEEeCHHHHHHHHHhc-----hhhhcCCCCCHHHHHHHHHHHH
Confidence 3 44554332 5566678988 78999873 4489999999988876421 1223455789999999999999
Q ss_pred HHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE
Q 010250 394 IYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR 470 (514)
Q Consensus 394 ~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~ 470 (514)
.+++ +++.++++++++++.+.|+++ ...+ ..+.|.++++.+.+.. ....+.+.|.++||.+.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~---~~~~~~~~~~~~~~~~-----------~~~~l~~~l~~~gi~v~ 346 (384)
T 1bs0_A 282 VIRSDEGDARREKLAALITRFRAGVQDL-PFTL---ADSCSAIQPLIVGDNS-----------RALQLAEKLRQQGCWVT 346 (384)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCEE---CSCCSSBCCEEEESHH-----------HHHHHHHHHHHTTEECC
T ss_pred HHhccccHHHHHHHHHHHHHHHHHHHhc-CCcc---cCCCCCEEEEEeCCHH-----------HHHHHHHHHHHCCcEEE
Confidence 8763 467888999999999999875 2111 1245667777764210 24568889999999998
Q ss_pred eeC--------CEEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250 471 VSG--------DNIMMSPPFIMSPEEVDELISKYGKA 499 (514)
Q Consensus 471 ~~g--------~~iRi~p~~~~t~e~id~~~~~l~~~ 499 (514)
+.. +.+||+++..+|++++++++++|+++
T Consensus 347 ~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 347 AIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp EECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred eecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 652 46999999889999999999999764
No 48
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=6e-32 Score=275.93 Aligned_cols=350 Identities=12% Similarity=0.081 Sum_probs=241.0
Q ss_pred eEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-CCC
Q 010250 84 LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKM 162 (514)
Q Consensus 84 ~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~ 162 (514)
+-..+++|+++||.||++||||.+|. +.++ .+|+|.+|+.+++.+..+.+.. .+ .+....+++.+.+.++. .+.
T Consensus 7 ~~~~~~~g~~~~d~~g~~~idl~~~~--~~~~-~~~~v~~a~~~~~~~~~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~ 81 (377)
T 3fdb_A 7 IEDLRARNTMKWTRYGQGVLPLWVAE--SDFS-TCPAVLQAITDAVQREAFGYQP-DG-SLLSQATAEFYADRYGYQARP 81 (377)
T ss_dssp HHHHHHTCCHHHHSSCTTSEECCSSC--CCSC-CCHHHHHHHHHHHHTTCCSSCC-SS-CCHHHHHHHHHHHHHCCCCCG
T ss_pred HHHhcCCCCceeeccCCCeeeecccC--CCCC-CCHHHHHHHHHHHHcCCCCCCC-CC-HHHHHHHHHHHHHHhCCCCCH
Confidence 33458999999999999999998883 3444 8999999999999863222221 22 45555666666554321 346
Q ss_pred CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccC
Q 010250 163 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRY 242 (514)
Q Consensus 163 ~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (514)
+++++++||++|++.+++.+. .++++|++.+++||+........+.... .++....
T Consensus 82 ~~i~~t~g~~~a~~~~~~~~~--------~~gd~vl~~~~~~~~~~~~~~~~g~~~~-------------~~~~~~~--- 137 (377)
T 3fdb_A 82 EWIFPIPDVVRGLYIAIDHFT--------PAQSKVIVPTPAYPPFFHLLSATQREGI-------------FIDATGG--- 137 (377)
T ss_dssp GGEEEESCHHHHHHHHHHHHS--------CTTCCEEEEESCCTHHHHHHHHHTCCEE-------------EEECTTS---
T ss_pred HHEEEeCChHHHHHHHHHHhc--------CCCCEEEEcCCCcHhHHHHHHHcCCEEE-------------EccCCCC---
Confidence 799999999999999998763 2346899999999997644333222111 1111100
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc-
Q 010250 243 AHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG- 321 (514)
Q Consensus 243 ~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G- 321 (514)
.++++|++.+.+ +..+.+++.| ++++|.+. +.+.+++|+++|++||+++|+||+|+++++.|
T Consensus 138 ------------~d~~~l~~~l~~---~~~~v~i~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~ 200 (377)
T 3fdb_A 138 ------------INLHDVEKGFQA---GARSILLCNP-YNPLGMVF-APEWLNELCDLAHRYDARVLVDEIHAPLVFDGQ 200 (377)
T ss_dssp ------------CCHHHHHHHHHT---TCCEEEEESS-BTTTTBCC-CHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSC
T ss_pred ------------CCHHHHHHHhcc---CCCEEEEeCC-CCCCCCCC-CHHHHHHHHHHHHHcCCEEEEEcccchhhcCCC
Confidence 125788888763 2345555555 77778765 56779999999999999999999999988877
Q ss_pred cc----ceecccCCCCchhchhhhhcCCcccceeEEe-CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh
Q 010250 322 TM----FGCDKYSIKPDLVSFAKALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK 396 (514)
Q Consensus 322 ~~----~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~ 396 (514)
.. ...+..+..+++.++||.++.+++++|++++ ++++++.+.. ..+..+++.++++++++.++|+..+
T Consensus 201 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~ 273 (377)
T 3fdb_A 201 HTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQ-------LSPVIKDGASTLGLIAAEAAYRYGT 273 (377)
T ss_dssp CCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHH-------SCHHHHCCCCHHHHHHHHHHHHHCH
T ss_pred CCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHH-------HHHhhcCCCCHHHHHHHHHHHhccH
Confidence 21 1222222334566899999644489998776 7888888864 2344567889999999999988532
Q ss_pred h--ccHHHHHHHHHHHHHhhhhh-ccCCCceeEEEeeeee-EEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEe
Q 010250 397 E--RNIVEQVNKIAPKFQDGVKA-FSDSPIIGEIRGTGLI-LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRV 471 (514)
Q Consensus 397 ~--~~~~~~~~~~~~~l~~~L~~-l~~~~~~~~v~g~g~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~ 471 (514)
+ ++..++++++.+++.+.|++ +.. +....+.+.+ .++.+....... .+...|+++ ||++.+
T Consensus 274 ~~~~~~~~~~~~~~~~l~~~L~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~~gi~v~~ 339 (377)
T 3fdb_A 274 DFLNQEVAYLKNNHDFLLHEIPKRIPG---AKITPMQATYLMWIDFRDTTIEG-----------SPSEFFIEKAKVAMND 339 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTT---CEECCCSBCSEEEEECTTSCCCS-----------CHHHHHHHHHCEECEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCC---ceEecCCeeEEEEEECcccCCCH-----------HHHHHHHHhCCEEecC
Confidence 2 45677888888888888877 332 2223334444 457775432111 255666665 999986
Q ss_pred e-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 472 S-------GDNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 472 ~-------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
+ .+.+|++++ .++++|++++++|++++++
T Consensus 340 g~~~~~~~~~~~Ris~~--~~~e~i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 340 GAWFGEDGTGFCRLNFA--TSREVLEEAIDRMAKAVSH 375 (377)
T ss_dssp GGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHHTT
T ss_pred ChhccCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHhh
Confidence 4 367999965 5999999999999998754
No 49
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.97 E-value=2.5e-30 Score=264.38 Aligned_cols=352 Identities=9% Similarity=0.050 Sum_probs=233.8
Q ss_pred CeEEEeeeCcEEEeCC-CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-C
Q 010250 83 PLVIEKSEGSYVYDVN-GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-S 160 (514)
Q Consensus 83 p~~~~~~~G~~~~d~d-G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~ 160 (514)
+++..+++|+++||.+ |+++|||.++. ..+ +.+|+|.+|+.+++.+..+.+.. ...+...++++.+.+.++. .
T Consensus 6 ~~~~~~~~g~~~~d~~~~~~~i~l~~~~--~~~-~~~~~v~~a~~~~~~~~~~~y~~--~~~~~~~~l~~~l~~~~g~~~ 80 (383)
T 3kax_A 6 KTVNRRGTHSIKWDTYKNEELIHAWIAD--MDF-EVPQPIQTALKKRIEHPIFGYTL--PPENIGDIICNWTKKQYNWDI 80 (383)
T ss_dssp -------------CCCSSSCCEECCCSS--CSS-CCCHHHHHHHHHHHHSCCCCCCC--CCTTHHHHHHHHHHHHHCCCC
T ss_pred ceeeccCCCceeeeccCCCCeeeccccc--CCC-CCCHHHHHHHHHHHhcCCCCCCC--CCHHHHHHHHHHHHHHhCCCC
Confidence 4567899999999954 58999998873 334 48999999999999763322211 1456677888888887641 3
Q ss_pred CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC---
Q 010250 161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--- 237 (514)
Q Consensus 161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--- 237 (514)
+.+++++++||++|++.+++.+. .++++|++.+++||+........+. ... .++..
T Consensus 81 ~~~~v~~~~g~~~a~~~~~~~l~--------~~gd~vl~~~~~~~~~~~~~~~~g~-~~~------------~~~~~~~~ 139 (383)
T 3kax_A 81 QKEWIVFSAGIVPALSTSIQAFT--------KENESVLVQPPIYPPFFEMVTTNNR-QLC------------VSPLQKQN 139 (383)
T ss_dssp CGGGEEEESCHHHHHHHHHHHHC--------CTTCEEEECSSCCHHHHHHHHHTTC-EEE------------ECCCEEET
T ss_pred ChhhEEEcCCHHHHHHHHHHHhC--------CCCCEEEEcCCCcHHHHHHHHHcCC-EEE------------eccceecC
Confidence 46789999999999999999873 3357899999999987644333221 111 01110
Q ss_pred CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc
Q 010250 238 HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 317 (514)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~ 317 (514)
..|. .++++|++.+. +++++|+++..++++|.+. +.+.+++|.++|++||+++|+||+|+++
T Consensus 140 ~~~~-------------~d~~~l~~~l~----~~~~~v~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~ 201 (383)
T 3kax_A 140 DTYA-------------IDFEHLEKQFQ----QGVKLMLLCSPHNPIGRVW-KKEELTKLGSLCTKYNVIVVADEIHSDI 201 (383)
T ss_dssp TEEE-------------CCHHHHHHHHT----TTCCEEEEESSBTTTTBCC-CHHHHHHHHHHHHHHTCEEEEECTTTTC
T ss_pred CcEE-------------EcHHHHHHHhC----cCCeEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHCCCEEEEEcccccc
Confidence 0010 01577887772 3455666666678888755 5678999999999999999999999999
Q ss_pred ccccccc-eecc-----cCCCCchhchhhhhc-CCcccceeEEe-CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHH
Q 010250 318 GRLGTMF-GCDK-----YSIKPDLVSFAKALS-SAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAI 389 (514)
Q Consensus 318 gr~G~~~-~~~~-----~gv~pDiv~~sK~l~-gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~ 389 (514)
++.|..+ .... .+..+++.++||.++ +| +++|++++ ++++++.+... .....+++.++++++++.
T Consensus 202 ~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~ 274 (383)
T 3kax_A 202 IYADHTHTPFASLSEELAARTITCMAPSKTFNIAG-LQASIIIIPNEKLRQAFTSI------QYRQGFHGLNIFAYTAMQ 274 (383)
T ss_dssp BCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGG-GCCEEEECCCHHHHHHHHHH------HHHTTCCCCCHHHHHHHH
T ss_pred ccCCCCceeHhhcCccccCcEEEEEEChhhccCcc-hhheEEEeCCHHHHHHHHHH------HhhcccCCCCHHHHHHHH
Confidence 8877532 1111 233344567899998 45 89999998 68888887642 122235578999999999
Q ss_pred HHHHHHh--hccHHHHHHHHHHHHHhhhhh-ccCCCceeEEEeeeeeE-EEEEccCCCCCCCCCCccchHHHHHHHHH-H
Q 010250 390 EALKIYK--ERNIVEQVNKIAPKFQDGVKA-FSDSPIIGEIRGTGLIL-GTEFADNKSPNEPFPPEWGIGAYFGAQCE-K 464 (514)
Q Consensus 390 aal~~~~--~~~~~~~~~~~~~~l~~~L~~-l~~~~~~~~v~g~g~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~ 464 (514)
++++..+ -++..++++++.+++.+.|++ +. .+..+.+.+.++ .+.+..... ....+.+.|+ +
T Consensus 275 ~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~ 341 (383)
T 3kax_A 275 SAYTECNDWLNEIRFYIEDNAKFACEYIKDHIP---TLSVMKPEGSFLLWIDCSALNL----------SQDERTKLLEEK 341 (383)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCT---TCEECCCSBSSEEEEECGGGCC----------CHHHHHHHHHHT
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhCC---CceEecCCceEEEEEEccccCC----------CHHHHHHHHHhh
Confidence 8887532 134567788888888888876 32 233334444444 477654211 1456788887 6
Q ss_pred CCcEEEee-------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 465 HGMLVRVS-------GDNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 465 ~Gv~~~~~-------g~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
+||++.++ .+.+|+++. .++++|++++++|++++
T Consensus 342 ~gi~v~~g~~~~~~~~~~iRi~~~--~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 342 GKIIVEPGEKYGLGGEEHIGINIG--CPRSVLEEILNRLRHTF 382 (383)
T ss_dssp SCEECEESGGGCTTCTTEEEEECS--SCHHHHHHHHHHHHHHH
T ss_pred CCEEeECchhhcCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 89999874 267999955 69999999999998876
No 50
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.97 E-value=4.5e-29 Score=256.17 Aligned_cols=353 Identities=10% Similarity=0.009 Sum_probs=223.6
Q ss_pred eEEEeeeCcEEEeCCCC-----EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCc-hHHHHHHHHHHhc
Q 010250 84 LVIEKSEGSYVYDVNGK-----KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTK-PSLDLAKELLEMF 157 (514)
Q Consensus 84 ~~~~~~~G~~~~d~dG~-----~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~-~~~ela~~L~~~~ 157 (514)
++-.+++|+++||.+|+ +||||.++. ..+| .+|+|.+|+.++++.....+.. ...+ ....+++.+.+.+
T Consensus 7 ~~~~~~~~~~~~d~~~~~~~~~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~y~~--~~~~~lr~~la~~l~~~~ 81 (390)
T 1d2f_A 7 VVDRHGTWCTQWDYVADRFGTADLLPFTISD--MDFA-TAPCIIEALNQRLMHGVFGYSR--WKNDEFLAAIAHWFSTQH 81 (390)
T ss_dssp -----------------------CEECCSSS--CSSC-CCHHHHHHHHHHHTTCCCCCCC--SCCHHHHHHHHHHHHHHS
T ss_pred cccccCCCccchhhhccccCCCCeeEeeecC--CCCC-CCHHHHHHHHHHHhCCCCCCCC--CChHHHHHHHHHHHHHhc
Confidence 34568999999999998 789997664 4577 7899999999998753221111 1223 4444555554443
Q ss_pred C-cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC
Q 010250 158 T-ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC 236 (514)
Q Consensus 158 ~-~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 236 (514)
+ ..+.+++++++||++|++.+++.+. .++++|++.+++||+........ |.... .++.
T Consensus 82 g~~~~~~~v~~t~g~~~al~~~~~~l~--------~~gd~vl~~~p~y~~~~~~~~~~-g~~~~------------~v~~ 140 (390)
T 1d2f_A 82 YTAIDSQTVVYGPSVIYMVSELIRQWS--------ETGEGVVIHTPAYDAFYKAIEGN-QRTVM------------PVAL 140 (390)
T ss_dssp CCCCCGGGEEEESCHHHHHHHHHHHSS--------CTTCEEEEEESCCHHHHHHHHHT-TCEEE------------EEEC
T ss_pred CCCCCHHHEEEcCCHHHHHHHHHHHhc--------CCCCEEEEcCCCcHHHHHHHHHC-CCEEE------------Eeec
Confidence 2 1345789999999999999998763 23478999999999976443322 21111 1111
Q ss_pred C---CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEech
Q 010250 237 P---HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV 313 (514)
Q Consensus 237 ~---~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv 313 (514)
. ..|. .++++|++.+.+ .++++|++...++++|.+. +.+++++|.++|++||+++|+||+
T Consensus 141 ~~~~~~~~-------------~d~~~l~~~l~~---~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~ 203 (390)
T 1d2f_A 141 EKQADGWF-------------CDMGKLEAVLAK---PECKIMLLCSPQNPTGKVW-TCDELEIMADLCERHGVRVISDEI 203 (390)
T ss_dssp EECSSSEE-------------CCHHHHHHHHTS---TTEEEEEEESSCTTTCCCC-CTTHHHHHHHHHHHTTCEEEEECT
T ss_pred ccCCCccc-------------cCHHHHHHHhcc---CCCeEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCCEEEEEcc
Confidence 0 0011 115777777752 2466666555577778765 568999999999999999999999
Q ss_pred hcCcccccccceecccCCCC---c-hhchhhhhc-CCcccceeEEeC-HHHHHHhhhccCCCCcccc-cCCC-CCcHHHH
Q 010250 314 ICAFGRLGTMFGCDKYSIKP---D-LVSFAKALS-SAYMPIGAILVS-PEVSEVIHSQSNTLGSFSH-GFTY-SGHPVSC 385 (514)
Q Consensus 314 ~tG~gr~G~~~~~~~~gv~p---D-iv~~sK~l~-gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~-~~t~-~~~pl~~ 385 (514)
|+++++.|..+. ....+.+ | +.++||.++ .| +++|+++++ +++++.+... .. ..++ +.+++++
T Consensus 204 ~~~~~~~g~~~~-~~~~~~~~~~d~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 274 (390)
T 1d2f_A 204 HMDMVWGEQPHI-PWSNVARGDWALLTSGSKSFNIPA-LTGAYGIIENSSSRDAYLSA-------LKGRDGLSSPSVLAL 274 (390)
T ss_dssp TTTCBCSSSCCC-CGGGTCCSSEEEEECSHHHHTCGG-GCCEEEEECSHHHHHHHHHH-------HHTTSCCCSCCHHHH
T ss_pred ccccccCCCCCc-CHHHcchhhHhhccCccHhhcccC-hhheEEEECCHHHHHHHHHH-------HhhhcccCCCCHHHH
Confidence 999877765321 1222322 3 778999997 55 899999985 7888877631 23 3455 6789999
Q ss_pred HHHHHHHHHHhh--ccHHHHHHHHHHHHHhhhhh-ccCCCceeEEEeeee-eEEEEEccCCCCCCCCCCccchHHHHHHH
Q 010250 386 AVAIEALKIYKE--RNIVEQVNKIAPKFQDGVKA-FSDSPIIGEIRGTGL-ILGTEFADNKSPNEPFPPEWGIGAYFGAQ 461 (514)
Q Consensus 386 aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~-l~~~~~~~~v~g~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (514)
+++.++++..++ ++..++++++.+++.+.|++ +... ..+++.|. +.++++..... ....+.+.
T Consensus 275 ~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~---~~~~~~~~~~~~~~~~~~~~----------~~~~l~~~ 341 (390)
T 1d2f_A 275 TAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPEL---NWQIPQSTYLAWLDLRPLNI----------DDNALQKA 341 (390)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSC---CCCCCSBCSEEEEECGGGCC----------CHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCC---EEecCCccEEEEEEccccCC----------CHHHHHHH
Confidence 999888874221 34566777888888888876 4322 22334444 44677754210 13457788
Q ss_pred HH-HCCcEEEee-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 462 CE-KHGMLVRVS-------GDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 462 l~-~~Gv~~~~~-------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
|. ++||++.++ .+.+||+++. ++++|++++++|+++++++
T Consensus 342 l~~~~gi~v~~g~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~~~ 389 (390)
T 1d2f_A 342 LIEQEKVAIMPGYTYGEEGRGFVRLNAGC--PRSKLEKGVAGLINAIRAV 389 (390)
T ss_dssp HHHTTCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCEEeeCccccCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHhh
Confidence 88 689999874 2579999764 6899999999999988653
No 51
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.97 E-value=3.1e-30 Score=264.35 Aligned_cols=352 Identities=10% Similarity=0.034 Sum_probs=243.4
Q ss_pred eEEEeeeCcEEEeCCCCEE-----EEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC
Q 010250 84 LVIEKSEGSYVYDVNGKKY-----LDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT 158 (514)
Q Consensus 84 ~~~~~~~G~~~~d~dG~~y-----lD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~ 158 (514)
++..+++|+++||.+|++| |||.++ .+..+.+|+|.+|+.+++.+..+.+. .+..+...++++++.+.++
T Consensus 11 ~~~~~~~g~~~~d~~~~~~~~~~~i~l~~~---~~~~~~~~~v~~a~~~~~~~~~~~y~--~~~~~~~~~l~~~l~~~~g 85 (391)
T 4dq6_A 11 IVDRSNNFSSKWSEMEKKYGTNDLLPMWVA---DMDFKAAPCIIDSLKNRLEQEIYGYT--TRPDSYNESIVNWLYRRHN 85 (391)
T ss_dssp CCCCTTTTBHHHHCHHHHHSCSCSEECCSS---SCSSCCCHHHHHHHHHHHTTCCCCCB--CCCHHHHHHHHHHHHHHHC
T ss_pred ccccccCCceeeeecccccCCCCceecccc---CCCCCCCHHHHHHHHHHHhCCCCCCC--CCCHHHHHHHHHHHHHHhC
Confidence 4456889999999987666 999877 44445799999999999976432221 1245666778888888764
Q ss_pred c-CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC
Q 010250 159 A-SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP 237 (514)
Q Consensus 159 ~-~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 237 (514)
. .+.+++++++||++|++.+++.+. .++++|++.+++||+........+.... .++..
T Consensus 86 ~~~~~~~v~~~~g~~~a~~~~~~~~~--------~~gd~vl~~~~~~~~~~~~~~~~g~~~~-------------~~~~~ 144 (391)
T 4dq6_A 86 WKIKSEWLIYSPGVIPAISLLINELT--------KANDKIMIQEPVYSPFNSVVKNNNRELI-------------ISPLQ 144 (391)
T ss_dssp CCCCGGGEEEESCHHHHHHHHHHHHS--------CTTCEEEECSSCCTHHHHHHHHTTCEEE-------------ECCCE
T ss_pred CCCcHHHeEEcCChHHHHHHHHHHhC--------CCCCEEEEcCCCCHHHHHHHHHcCCeEE-------------eeeee
Confidence 1 346789999999999999999873 3357899999999997644433222111 01110
Q ss_pred ----CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEech
Q 010250 238 ----HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV 313 (514)
Q Consensus 238 ----~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv 313 (514)
..|+ .++++|++.+. + +++|+++..++++|.+. +++.+++|+++|++||+++|+||+
T Consensus 145 ~~~~~~~~-------------~d~~~l~~~l~----~-~~~v~i~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~ 205 (391)
T 4dq6_A 145 KLENGNYI-------------MDYEDIENKIK----D-VKLFILCNPHNPVGRVW-TKDELKKLGDICLKHNVKIISDEI 205 (391)
T ss_dssp ECTTSCEE-------------CCHHHHHHHCT----T-EEEEEEESSBTTTTBCC-CHHHHHHHHHHHHHTTCEEEEECT
T ss_pred ecCCCceE-------------eeHHHHHHHhh----c-CCEEEEECCCCCCCcCc-CHHHHHHHHHHHHHcCCEEEeecc
Confidence 0011 01467777664 2 66676666688888765 567799999999999999999999
Q ss_pred hcCcccccccc-eeccc-----CCCCchhchhhhhcCCcccceeEEeCH-HHHHHhhhccCCCCcccccCCCCCcHHHHH
Q 010250 314 ICAFGRLGTMF-GCDKY-----SIKPDLVSFAKALSSAYMPIGAILVSP-EVSEVIHSQSNTLGSFSHGFTYSGHPVSCA 386 (514)
Q Consensus 314 ~tG~gr~G~~~-~~~~~-----gv~pDiv~~sK~l~gG~~pig~v~~~~-~i~~~l~~~~~~~~~~~~~~t~~~~pl~~a 386 (514)
|++|++.|... ....+ +....+.+++|.++.+++++|++++++ ++++.+... ..+..+++.++++++
T Consensus 206 ~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 279 (391)
T 4dq6_A 206 HSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDA------FTRIDIKRNNCFSLV 279 (391)
T ss_dssp TTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHH------HHHTTCCCCCHHHHH
T ss_pred ccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHHHHHHH------HHhhcCCCCCHHHHH
Confidence 99998777532 12111 111234478999973338999999875 888887642 123346678999999
Q ss_pred HHHHHHHHHh--hccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeE-EEEEccCCCCCCCCCCccchHHHHHHHHH
Q 010250 387 VAIEALKIYK--ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLIL-GTEFADNKSPNEPFPPEWGIGAYFGAQCE 463 (514)
Q Consensus 387 aa~aal~~~~--~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 463 (514)
++.++++..+ -++..++++++.+++.+.|++. .+.+..+.+.+.++ ++++..... ....+.+.|.
T Consensus 280 a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~ 347 (391)
T 4dq6_A 280 ATEASYNNGESWLESFLEYLESNIDFAIKYINEN--MPKLKVRKPEGTYLLWVDFSALGL----------SDEELESILV 347 (391)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH--CTTSEECCCSBSSEEEEECGGGCC----------CHHHHHHHHH
T ss_pred HHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhh--CCCCEecCCCccEEEEEEhhhcCC----------CHHHHHHHHH
Confidence 9999887532 1345677778888888888762 12233334445544 477754211 1456888999
Q ss_pred HC-CcEEEee-------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 464 KH-GMLVRVS-------GDNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 464 ~~-Gv~~~~~-------g~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
++ ||++.++ .+.+|++++ +++++|++++++|++++
T Consensus 348 ~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 348 QKGKVALNQGNSFGIGGSGYQRINLA--CPRSMLEEALIRIKNAI 390 (391)
T ss_dssp HTTCEECEEGGGGCTTCTTEEEEECC--SCHHHHHHHHHHHHHHH
T ss_pred HhCCEEeeCchhhCCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 98 9999874 267999965 79999999999999876
No 52
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.97 E-value=1.6e-29 Score=260.16 Aligned_cols=351 Identities=13% Similarity=0.074 Sum_probs=236.3
Q ss_pred EEEeeeCcEEEeCCCC-------EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHh-
Q 010250 85 VIEKSEGSYVYDVNGK-------KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEM- 156 (514)
Q Consensus 85 ~~~~~~G~~~~d~dG~-------~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~- 156 (514)
+..+++|+++||.+|+ .++||.++. ..++ .+|.|.+++.++++.....+. .. ..++.+.++++
T Consensus 9 ~~~~~~g~~~~d~~g~~~g~~~~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~y~-----~~-~~~l~~~la~~l 79 (399)
T 1c7n_A 9 ISRKNLGSLKWDLMYSQNPEVGNEVVPLSVAD--MEFK-NPPELIEGLKKYLDETVLGYT-----GP-TEEYKKTVKKWM 79 (399)
T ss_dssp CCCTTTTBHHHHHHHHHCTTCCTTCCCCCSSS--CSSC-CCHHHHHHHHHHHHHCCCSSB-----CC-CHHHHHHHHHHH
T ss_pred ccccCCCccccccchhhccccCCCceeeeecC--CCCC-CCHHHHHHHHHHHhcCCCCCC-----CC-cHHHHHHHHHHH
Confidence 4458999999999884 789997764 3455 689999999999865322111 11 34555555554
Q ss_pred ---cC-cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCccc
Q 010250 157 ---FT-ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVL 232 (514)
Q Consensus 157 ---~~-~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~ 232 (514)
++ +.+.+++++++||++|++.+++.+. ..+++|++.+++||+........ |....
T Consensus 80 ~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~--------~~gd~vl~~~p~~~~~~~~~~~~-g~~~~------------ 138 (399)
T 1c7n_A 80 KDRHQWDIQTDWIINTAGVVPAVFNAVREFT--------KPGDGVIIITPVYYPFFMAIKNQ-ERKII------------ 138 (399)
T ss_dssp HHHHCCCCCGGGEEEESSHHHHHHHHHHHHC--------CTTCEEEECSSCCTHHHHHHHTT-TCEEE------------
T ss_pred HHHhCCCCChhhEEEcCCHHHHHHHHHHHhc--------CCCCEEEEcCCCcHhHHHHHHHc-CCEEE------------
Confidence 32 1346789999999999999998763 23468999999999976443322 21111
Q ss_pred ccCCC-C--cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEE
Q 010250 233 HTDCP-H--YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFI 309 (514)
Q Consensus 233 ~~~~~-~--~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI 309 (514)
.++.. . .|. .++++|++.+.+ .++++|++...++++|.+. +++++++|.++|++||+++|
T Consensus 139 ~~~~~~~~g~~~-------------~d~~~l~~~l~~---~~~~~v~~~~~~nptG~~~-~~~~l~~i~~~~~~~~~~li 201 (399)
T 1c7n_A 139 ECELLEKDGYYT-------------IDFQKLEKLSKD---KNNKALLFCSPHNPVGRVW-KKDELQKIKDIVLKSDLMLW 201 (399)
T ss_dssp ECCCEEETTEEE-------------CCHHHHHHHHTC---TTEEEEEEESSBTTTTBCC-CHHHHHHHHHHHHHSSCEEE
T ss_pred ecccccCCCCEE-------------EcHHHHHHHhcc---CCCcEEEEcCCCCCCCcCc-CHHHHHHHHHHHHHcCCEEE
Confidence 11110 0 011 115777777752 3466777666677788754 67899999999999999999
Q ss_pred EechhcCccccccc-ceeccc-----CCCCchhchhhhhc-CCcccceeEEeC-HHHHHHhhhccCCCCcccccCCC-CC
Q 010250 310 ADEVICAFGRLGTM-FGCDKY-----SIKPDLVSFAKALS-SAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTY-SG 380 (514)
Q Consensus 310 ~DEv~tG~gr~G~~-~~~~~~-----gv~pDiv~~sK~l~-gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~-~~ 380 (514)
+||+|++|++.|.. .....+ +....+.++||.++ .| +++|+++++ +++++.+... ....++ +.
T Consensus 202 ~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~-------~~~~~~~~~ 273 (399)
T 1c7n_A 202 SDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAG-MGMSNIIIKNPDIRERFTKS-------RDATSGMPF 273 (399)
T ss_dssp EECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGG-GCCEEEECCCHHHHHHHHHH-------HHHTTCCCC
T ss_pred EEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccc-hheEEEEECCHHHHHHHHHH-------HhhcccCCC
Confidence 99999998777642 222222 22223457899998 45 899999996 6788887642 222334 56
Q ss_pred cHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHhhhhh-ccCCCceeEEEeeeee-EEEEEccCCCCCCCCCCccchHH
Q 010250 381 HPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDGVKA-FSDSPIIGEIRGTGLI-LGTEFADNKSPNEPFPPEWGIGA 456 (514)
Q Consensus 381 ~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~-l~~~~~~~~v~g~g~~-~~i~~~~~~~~~~~~~~~~~~~~ 456 (514)
++++++++.++|+...+ ++..++++++.+++.+.|++ +.. +..+++.|.+ .++++..... ...
T Consensus 274 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~---~~~~~~~~~~~~~~~~~~~~~----------~~~ 340 (399)
T 1c7n_A 274 TTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPE---IKAPLIEGTYLQWIDFRALKM----------DHK 340 (399)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTT---SBCCCCSBSSEEEEECGGGCC----------CHH
T ss_pred CHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCC---CeEecCCceEEEEEEcccCCC----------CHH
Confidence 89999999888874211 24566677888888888876 422 2223344544 4577754210 144
Q ss_pred HHHHHHH-HCCcEEEee-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 457 YFGAQCE-KHGMLVRVS-------GDNIMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 457 ~~~~~l~-~~Gv~~~~~-------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
.+.+.|+ ++||++.++ .+.|||+++. ++++|++++++|.++++++.+
T Consensus 341 ~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~~~~ 395 (399)
T 1c7n_A 341 AMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA--PSSVIQESLERLNKALKDLKN 395 (399)
T ss_dssp HHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHhCCEEEeCccccCCCCCCeEEEEecc--CHHHHHHHHHHHHHHHHHHHh
Confidence 5778887 689999874 2579999764 589999999999999987654
No 53
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.96 E-value=4.7e-28 Score=251.84 Aligned_cols=358 Identities=12% Similarity=0.024 Sum_probs=230.1
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccc---cCCchHHHHHHHHHHhcCc-CCCC-eEEEeCChhHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWN---RTTKPSLDLAKELLEMFTA-SKMA-KVFFTNSGSEA 174 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~---~~~~~~~ela~~L~~~~~~-~~~~-~v~~~~sGseA 174 (514)
..+|||.+|.. .+| .+|+|.+|+.+++++.......+. +..+....+++.+.+.++. .+.+ ++++++||++|
T Consensus 37 ~~~i~l~~~~~--~~~-~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a 113 (429)
T 1yiz_A 37 YKPLNLGQGFP--DYH-APKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEA 113 (429)
T ss_dssp HCCEECCSSSC--SSC-CCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHH
T ss_pred CCEEEecCCCC--CCC-CCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHH
Confidence 35899988753 567 689999999999976321111111 1223333444444443331 3457 89999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250 175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254 (514)
Q Consensus 175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
++.+++.+. ..+++|++.+++||+....... .|.................. ...|.
T Consensus 114 ~~~~~~~~~--------~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~--~~~~~------------- 169 (429)
T 1yiz_A 114 LYATIQGHV--------DEGDEVIIIEPFFDCYEPMVKA-AGGIPRFIPLKPNKTGGTIS--SADWV------------- 169 (429)
T ss_dssp HHHHHHHHC--------CTTCEEEEEESCCTTHHHHHHH-TTCEEEEEECBCCCSSSSEE--GGGCB-------------
T ss_pred HHHHHHHhc--------CCCCEEEEcCCCchhHHHHHHH-cCCEEEEEeCCccccccccc--ccCcc-------------
Confidence 999999873 2346899999999997543322 22111100000000000000 00000
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eec----cc
Q 010250 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCD----KY 329 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~----~~ 329 (514)
.++++|++.+. +++++|+++++++++|.+. +++++++|+++|++||+++|+||+|++|++.|..+ .+. .+
T Consensus 170 ~d~~~l~~~l~----~~~~~v~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~ 244 (429)
T 1yiz_A 170 LDNNELEALFN----EKTKMIIINTPHNPLGKVM-DRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMW 244 (429)
T ss_dssp CCHHHHHHHCC----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTG
T ss_pred cCHHHHHHHhc----cCceEEEECCCCCCCCccC-CHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCc
Confidence 11466776663 4678888888888889775 57899999999999999999999999987766421 221 23
Q ss_pred CCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH-----Hhhc----cH
Q 010250 330 SIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI-----YKER----NI 400 (514)
Q Consensus 330 gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~-----~~~~----~~ 400 (514)
+..+++.++||.++.+++|+|++++++++++.+.. ..+..+++.++++++++.++|+. ...+ +.
T Consensus 245 ~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 317 (429)
T 1yiz_A 245 ERTITIGSAGKTFSLTGWKIGWAYGPEALLKNLQM-------VHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSI 317 (429)
T ss_dssp GGEEEEEEHHHHHTCGGGCCEEEESCHHHHHHHHH-------HHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHH
T ss_pred CceEEEecchhccCCCCcceEEEEeCHHHHHHHHH-------HHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHH
Confidence 34455668999998433899999999999988863 23446788899999999999987 3212 34
Q ss_pred HHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCC-CCCCccchHHHHHHHHH-HCCcEEEee------
Q 010250 401 VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNE-PFPPEWGIGAYFGAQCE-KHGMLVRVS------ 472 (514)
Q Consensus 401 ~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~l~-~~Gv~~~~~------ 472 (514)
.++++++++++.+.|+++ . +.......|.++++++.....+.. +..........+.+.|+ ++||++.++
T Consensus 318 ~~~~~~~~~~l~~~L~~~-g--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~ 394 (429)
T 1yiz_A 318 SGELMAKRDYMASFLAEV-G--MNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSE 394 (429)
T ss_dssp HHHHHHHHHHHHHHHHHH-T--CEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCG
T ss_pred HHHHHHHHHHHHHHHHhC-C--CcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCC
Confidence 556777777888888765 2 221122246788888764311000 00000012445777776 799999863
Q ss_pred ------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 473 ------GDNIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 473 ------g~~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
.+.|||+++ .++++|++++++|+++++
T Consensus 395 ~~~~~~~~~iRis~~--~~~e~i~~~l~~l~~~l~ 427 (429)
T 1yiz_A 395 PNKHLGEDFVRYCFF--KKDENLQKAAEILRKWKG 427 (429)
T ss_dssp GGGGGTTTEEEEECC--SCHHHHHHHHHHHHHHSC
T ss_pred cccCCCCCeEEEEec--CCHHHHHHHHHHHHHhcc
Confidence 357999976 599999999999998764
No 54
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.96 E-value=9.8e-28 Score=247.48 Aligned_cols=345 Identities=17% Similarity=0.134 Sum_probs=237.1
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc----Cc-CCCCeEEEeCChh
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----TA-SKMAKVFFTNSGS 172 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~----~~-~~~~~v~~~~sGs 172 (514)
.|+.+|||.+|.. ...||.+|.|.+++.+++++..... .+. ......++.+.+++++ +. ...+++++++||+
T Consensus 32 ~g~~~idl~~g~~-~~~~~~~~~v~~a~~~~~~~~~~~~-~y~-~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t 108 (407)
T 2zc0_A 32 KGVKLISLAAGDP-DPELIPRAVLGEIAKEVLEKEPKSV-MYT-PANGIPELREELAAFLKKYDHLEVSPENIVITIGGT 108 (407)
T ss_dssp SSCCCEECCSCCC-CTTTSCHHHHHHHHHHHHHHCGGGG-SCC-CTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHH
T ss_pred CCCceEeCCCCCC-CchhCCHHHHHHHHHHHHhhccccc-cCC-CCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHH
Confidence 3788999988865 3568899999999999987642111 111 1222355666666655 31 3457899999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250 173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY 252 (514)
Q Consensus 173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (514)
+|++.+++.++ ..+++|++.+++||+...... ..|... ..++.... +
T Consensus 109 ~a~~~~~~~~~--------~~gd~vl~~~p~~~~~~~~~~-~~g~~~------------~~v~~~~~------~------ 155 (407)
T 2zc0_A 109 GALDLLGRVLI--------DPGDVVITENPSYINTLLAFE-QLGAKI------------EGVPVDND------G------ 155 (407)
T ss_dssp HHHHHHHHHHC--------CTTCEEEEEESCCHHHHHHHH-TTTCEE------------EEEEEETT------E------
T ss_pred HHHHHHHHHhc--------CCCCEEEEeCCChHHHHHHHH-HcCCEE------------EEcccCCC------C------
Confidence 99999999874 234789999999998753322 222111 11111000 0
Q ss_pred HHHHHHHHHHHHHHh--CCCcEEEE-EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-ceecc
Q 010250 253 STRLANNLEDLILKE--GPETIAAF-IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGCDK 328 (514)
Q Consensus 253 ~~~~~~~le~li~~~--~~~~~aav-ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~~~ 328 (514)
.++++|++.+.+. ...++++| +++..++++|.+. +.+++++|.++|++||+++|+||+|+++.+.|.. .....
T Consensus 156 --~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 232 (407)
T 2zc0_A 156 --MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTM-SMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKA 232 (407)
T ss_dssp --ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGG
T ss_pred --CCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCC-CHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhh
Confidence 1257787777521 11256776 4566678888765 5789999999999999999999999988766653 22323
Q ss_pred cCCC---CchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH--h---hccH
Q 010250 329 YSIK---PDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY--K---ERNI 400 (514)
Q Consensus 329 ~gv~---pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~--~---~~~~ 400 (514)
++.. .++.++||.++.| +++|++++++++++.+... ....+++.++++++++.++|+.. + -++.
T Consensus 233 ~~~~~~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 304 (407)
T 2zc0_A 233 LDNEGRVIVAGTLSKVLGTG-FRIGWIIAEGEILKKVLMQ-------KQPIDFCAPAISQYIALEYLKRGYFEKYHLEGA 304 (407)
T ss_dssp GCSSCCEEEEEESTTTTCTT-SCCEEEECCHHHHHHHHHH-------HTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTH
T ss_pred cCCCCCEEEEcccccccCCC-cceEEEecCHHHHHHHHHH-------HHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHH
Confidence 3222 3455789999966 8999999999999888642 33456777899999988888753 2 1356
Q ss_pred HHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee------
Q 010250 401 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS------ 472 (514)
Q Consensus 401 ~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~------ 472 (514)
.++++++.+++.+.|++. ....... ...|.++++.+.+.. ....+.+.|.++ ||++.++
T Consensus 305 ~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~~~~~~~~~~~~~-----------~~~~l~~~l~~~~gi~v~~g~~~~~~ 371 (407)
T 2zc0_A 305 LLGYKEKRDIMLKALENHLPNAEFTK--PIAGMFVMFFLPEGA-----------DGISFANELMEREGVVVVPGKPFYTD 371 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSCBCC--CSBSSEEEEECSTTC-----------CHHHHHHHHHHHTCEECBCSGGGCSS
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEec--CCCcEEEEEEcCCCC-----------CHHHHHHHHHHhCCeEEECchhccCC
Confidence 777888888999988763 2222221 234667778775311 145678888888 9999863
Q ss_pred ---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 473 ---GDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 473 ---g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
.+.+||+++.. |+++|++++++|+++++++
T Consensus 372 ~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~ 404 (407)
T 2zc0_A 372 ESGKNAIRLNFSRP-SKEEIPIGIKKLAKLYKEK 404 (407)
T ss_dssp SCCTTEEEEECSSS-CTTHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHHHH
Confidence 25799998766 8999999999999998765
No 55
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.96 E-value=9.6e-28 Score=243.28 Aligned_cols=338 Identities=13% Similarity=0.108 Sum_probs=222.9
Q ss_pred CeEEEeeeCcEEEe-CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250 83 PLVIEKSEGSYVYD-VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 161 (514)
Q Consensus 83 p~~~~~~~G~~~~d-~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~ 161 (514)
++++.+|.+.+.++ .+|+++|||.+|. ++++ .+|+|.+|+.++++....+ +.....++++.++++++ .+
T Consensus 8 ~~~~~~g~~~~~~~~~~~~~~idl~~~~--~~~~-~~~~v~~a~~~~~~~~~~y------~~~~~~~l~~~la~~~~-~~ 77 (361)
T 3ftb_A 8 GDLMIHGGDIYTEGVFKGRELLDYSSNI--NPLG-IPKSFLNNIDEGIKNLGVY------PDVNYRRLNKSIENYLK-LK 77 (361)
T ss_dssp --------------------CEETTCCC--CTTC-SCHHHHTTHHHHHHGGGSC------CCTTCHHHHHHHHHHHT-CC
T ss_pred CccccCCCCHHHHhhcCCCCEEEecCCC--CCCC-CCHHHHHHHHHHHHHhcCC------CCccHHHHHHHHHHHhC-CC
Confidence 35555665555544 4899999999885 4566 6899999999998764222 23445789999999884 35
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
.+++++++||++|++.+++.+ ++|++.+++||+........+.... .++....
T Consensus 78 ~~~i~~~~g~t~al~~~~~~~------------d~vi~~~~~~~~~~~~~~~~g~~~~-------------~~~~~~~-- 130 (361)
T 3ftb_A 78 DIGIVLGNGASEIIELSISLF------------EKILIIVPSYAEYEINAKKHGVSVV-------------FSYLDEN-- 130 (361)
T ss_dssp SCEEEEESSHHHHHHHHHTTC------------SEEEEEESCCTHHHHHHHHTTCEEE-------------EEECCTT--
T ss_pred cceEEEcCCHHHHHHHHHHHc------------CcEEEecCChHHHHHHHHHcCCeEE-------------EeecCcc--
Confidence 679999999999999998753 6899999999987544333221111 1111100
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G 321 (514)
. + + +++++++.+.+ ..+.++..| ++++|.+. +.+.+++|.++|++||+++|+||+|+++++.+
T Consensus 131 ~---~-----~---~~~~l~~~l~~----~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~ 193 (361)
T 3ftb_A 131 M---C-----I---DYEDIISKIDD----VDSVIIGNP-NNPNGGLI-NKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDP 193 (361)
T ss_dssp S---C-----C---CHHHHHHHTTT----CSEEEEETT-BTTTTBCC-CHHHHHHHHHHHHHHTCEEEEECSSGGGTCCT
T ss_pred c---C-----C---CHHHHHHhccC----CCEEEEeCC-CCCCCCCC-CHHHHHHHHHHhhhcCCEEEEECcchhhcCCc
Confidence 0 0 0 03667776642 334444555 66677655 56779999999999999999999999886642
Q ss_pred ccceecccCCCCchh---chhhhhcCCcccceeEE-eCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh
Q 010250 322 TMFGCDKYSIKPDLV---SFAKALSSAYMPIGAIL-VSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE 397 (514)
Q Consensus 322 ~~~~~~~~gv~pDiv---~~sK~l~gG~~pig~v~-~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~ 397 (514)
........+..++++ +++|.++.+++++|+++ +++++++.+.. ...+++.|+++++++.++|+..+.
T Consensus 194 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~~~ 264 (361)
T 3ftb_A 194 SSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKA---------KQNPWNINCFAEMAAINCLKDTNY 264 (361)
T ss_dssp TSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHT---------TSCTTCSCHHHHHHHHHTSSCHHH
T ss_pred ccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHh---------hCCCCCCCHHHHHHHHHHhcCHHH
Confidence 222233333334433 68999873338999998 89999998873 223678899999999988873211
Q ss_pred -ccHHHHHHHHHHHHHhhhhhccCCCcee-EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---
Q 010250 398 -RNIVEQVNKIAPKFQDGVKAFSDSPIIG-EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--- 472 (514)
Q Consensus 398 -~~~~~~~~~~~~~l~~~L~~l~~~~~~~-~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--- 472 (514)
++..++++++.+++.+.|+++ +.+. ..++.|.++.+.+... ....+.+.|.++||++.++
T Consensus 265 ~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~l~~~gi~v~~g~~~ 329 (361)
T 3ftb_A 265 IEESLLWIKKERKRFIEELNKI---GFIKRVFSPHANFVLCRLENI------------SGEKLYDSLLKEDIVIRRCCNF 329 (361)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHS---SSEEEEECCSSSEEEEEESSS------------CHHHHHHHHHTTTEECEECTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHhC---CCCceecCCCCeEEEEEcCCC------------CHHHHHHHHHHCCeEEeeCccC
Confidence 345666777777888877765 4454 5667788888887541 1456888999999999874
Q ss_pred ----CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 473 ----GDNIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 473 ----g~~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
.+.+|++++ ++++++++++.|++..+
T Consensus 330 ~~~~~~~iRis~~---~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 330 IGLDDSFVRFAIK---DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp TTCCTTEEEEECC---CHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEcC---CHHHHHHHHHHHHHHHh
Confidence 357999954 88899998888887654
No 56
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.96 E-value=3.6e-29 Score=257.97 Aligned_cols=363 Identities=13% Similarity=0.040 Sum_probs=232.9
Q ss_pred eEEEeeeCcEEEeCCCC---EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc-cccccccCCchHHHHHHHHHHhcCc
Q 010250 84 LVIEKSEGSYVYDVNGK---KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFTA 159 (514)
Q Consensus 84 ~~~~~~~G~~~~d~dG~---~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~-~~~~~~~~~~~~~ela~~L~~~~~~ 159 (514)
.++.+++|.++++.+++ ++|||.+|.. ++++ .+|+|++|+.+++++... .+....+..+...++++++.+.++.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~id~~~g~~-~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~ 97 (407)
T 3nra_A 20 EVRQSAAGLEALIRGAPIEGRPVDFSHGDV-DAHE-PTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGA 97 (407)
T ss_dssp -------CCTTTCCSCCCCSCCEETTSCCT-TTSC-CCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTS
T ss_pred HHHHHhhhhHHHhhcCCCCCceeeecCcCC-CCCC-CcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCC
Confidence 35678888887765555 5999998743 2334 689999999999875322 1111123456777888888887642
Q ss_pred C-CC-CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC
Q 010250 160 S-KM-AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP 237 (514)
Q Consensus 160 ~-~~-~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 237 (514)
. .. +++++++||++|++.+++.+. .++++|++.+++|++........ |........... + ..+
T Consensus 98 ~~~~~~~i~~~~g~~~a~~~~~~~l~--------~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~~-~-----~~~ 162 (407)
T 3nra_A 98 PVDARDGLIITPGTQGALFLAVAATV--------ARGDKVAIVQPDYFANRKLVEFF-EGEMVPVQLDYV-S-----ADE 162 (407)
T ss_dssp CCCTTTSEEEESHHHHHHHHHHHTTC--------CTTCEEEEEESCCTHHHHHHHHT-TCEEEEEEBCCC-S-----SCC
T ss_pred CCCCCCcEEEeCCcHHHHHHHHHHhC--------CCCCEEEEcCCcccchHHHHHHc-CCEEEEeecccc-c-----ccC
Confidence 1 12 689999999999999998653 34568999999999865333322 211110000000 0 000
Q ss_pred CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc
Q 010250 238 HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 317 (514)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~ 317 (514)
+.+. .++++|++.+.+ +..+.+++.| ++++|.+. +.+++++|.++|++||+++|+||+|+++
T Consensus 163 ~~~~-------------~d~~~l~~~l~~---~~~~v~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~Dea~~~~ 224 (407)
T 3nra_A 163 TRAG-------------LDLTGLEEAFKA---GARVFLFSNP-NNPAGVVY-SAEEIGQIAALAARYGATVIADQLYSRL 224 (407)
T ss_dssp SSCC-------------BCHHHHHHHHHT---TCCEEEEESS-CTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTS
T ss_pred cCCC-------------cCHHHHHHHHhh---CCcEEEEcCC-CCCCCccc-CHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence 1111 125778887763 2334445555 77778655 6788999999999999999999999988
Q ss_pred ccccccc-eecccC-----CCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHH
Q 010250 318 GRLGTMF-GCDKYS-----IKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEA 391 (514)
Q Consensus 318 gr~G~~~-~~~~~g-----v~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aa 391 (514)
++.|+.+ .....+ ...++.++||.++.+++++|++++++++++.+.. .....+++.++++++++.++
T Consensus 225 ~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~a~~~~ 297 (407)
T 3nra_A 225 RYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAIIARMEK-------LQAIVSLRAAGYSQAVLRGW 297 (407)
T ss_dssp BCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHHHHHHH-------HHHHHTSSSCHHHHGGGGGT
T ss_pred ccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHHHHHHH-------HHhhhccCCChHHHHHHHHH
Confidence 7777543 233322 2233557899998333899999999999988864 23445777788888887777
Q ss_pred HHHHh--hccHHHHHHHHHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCc
Q 010250 392 LKIYK--ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGM 467 (514)
Q Consensus 392 l~~~~--~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv 467 (514)
|+... -++..++++++.+++.+.|+++ +.+..+.+. |.++.+.+..... ....+.+.|++ +||
T Consensus 298 l~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~gi 364 (407)
T 3nra_A 298 FDEAPGWMEDRIARHQAIRDELLHVLRGC---EGVFARTPQAGSYLFPRLPKLAV----------APAEFVKILRLQAGV 364 (407)
T ss_dssp TCCCTTHHHHHHHHHHHHHHHHHHHHHTS---TTCBCCCCSBSSEECCBCCCBSS----------CHHHHHHHHHHHHCE
T ss_pred HhccchHHHHHHHHHHHHHHHHHHHHhcC---CCceeccCCeeEEEEEeCCCCCC----------CHHHHHHHHHHhCCE
Confidence 65211 1234566777777888877765 222222233 3555555543110 14567788865 599
Q ss_pred EEEee-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 468 LVRVS-------GDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 468 ~~~~~-------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
++.++ .+.||++++ .|+++|++++++|+++++++
T Consensus 365 ~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~~~~l~~~~~~~ 405 (407)
T 3nra_A 365 VVTPGTEFSPHTADSVRLNFS--QDHEAAVAAARRIVTLVERY 405 (407)
T ss_dssp ECEEGGGTCTTCTTBEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred EEeCchhhCCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHHHh
Confidence 99864 257999976 49999999999999998754
No 57
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.96 E-value=8.5e-28 Score=245.38 Aligned_cols=334 Identities=14% Similarity=0.079 Sum_probs=224.7
Q ss_pred CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc----CcC-CCC-eEEEeCC
Q 010250 97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----TAS-KMA-KVFFTNS 170 (514)
Q Consensus 97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~----~~~-~~~-~v~~~~s 170 (514)
.+|+++|||.+|.. .+| .+|.+.+|+.+++++... + .+. ......++.+.+++++ +.. ..+ ++++++|
T Consensus 22 ~~g~~~idl~~~~~--~~~-~~~~v~~a~~~~~~~~~~-~-~y~-~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g 95 (376)
T 2dou_A 22 ERGVGLIDLSIGST--DLP-PPEAPLKALAEALNDPTT-Y-GYC-LKSCTLPFLEEAARWYEGRYGVGLDPRREALALIG 95 (376)
T ss_dssp HTTCCCEECSSCCC--CCC-CCHHHHHHHHHHTTCGGG-S-SCC-CHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESS
T ss_pred ccCCCEEeccCCCC--CCC-CCHHHHHHHHHHHhCCCc-C-CCC-CCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCC
Confidence 46889999988863 577 589999999999865211 1 111 1123456777776665 321 234 8999999
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChh
Q 010250 171 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 250 (514)
Q Consensus 171 GseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (514)
|++|++.+++.+. .++++|++.+++||+........ |.... .++.++.|..
T Consensus 96 ~~~a~~~~~~~l~--------~~gd~vl~~~p~y~~~~~~~~~~-g~~~~------------~~~~~~~~~~-------- 146 (376)
T 2dou_A 96 SQEGLAHLLLALT--------EPEDLLLLPEVAYPSYFGAARVA-SLRTF------------LIPLREDGLA-------- 146 (376)
T ss_dssp HHHHHHHHHHHHC--------CTTCEEEEESSCCHHHHHHHHHT-TCEEE------------EECBCTTSSB--------
T ss_pred cHHHHHHHHHHhc--------CCCCEEEECCCCcHhHHHHHHHc-CCEEE------------EeeCCCCCCC--------
Confidence 9999999998763 23468999999999976543332 21111 1111111110
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eeccc
Q 010250 251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKY 329 (514)
Q Consensus 251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~ 329 (514)
++++|++.+. +++++|+++..++++|.+. +.+++++|.++|++||+++|+||+|+++.+.|... .....
T Consensus 147 -----d~~~l~~~l~----~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 216 (376)
T 2dou_A 147 -----DLKAVPEGVW----REAKVLLLNYPNNPTGAVA-DWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALP 216 (376)
T ss_dssp -----CGGGSCHHHH----HHEEEEEECSSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGST
T ss_pred -----CHHHHHHhhc----cCceEEEECCCCCCcCccC-CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcC
Confidence 1355666554 2466777765577778764 67899999999999999999999999887666321 12222
Q ss_pred ---CCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHH
Q 010250 330 ---SIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQV 404 (514)
Q Consensus 330 ---gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~ 404 (514)
+...++.++||.++.+++++|++++++++++.+... ....+++.++++++++.++|+..++ ++..+++
T Consensus 217 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 289 (376)
T 2dou_A 217 GAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERV-------KGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVY 289 (376)
T ss_dssp TGGGTEEEEEEHHHHHTCGGGCCEEEEECHHHHHHHHHH-------HHHHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred CCCCcEEEEecchhhcCChhheeEEEecCHHHHHHHHHH-------HHhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 222334579999973338999999999999888642 3345667789999998888864211 2345667
Q ss_pred HHHHHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------CCEE
Q 010250 405 NKIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------GDNI 476 (514)
Q Consensus 405 ~~~~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------g~~i 476 (514)
+++.+++.+.|+++ +..+.+ .|.++++++.+.. ....+.+.|.++||++.++ .+.+
T Consensus 290 ~~~~~~l~~~L~~~-----~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~ 353 (376)
T 2dou_A 290 RERALGMAEALKGV-----LSLLPPRATMYLWGRLPEGV-----------DDLEFGLRLVERGVALAPGRGFGPGGKGFV 353 (376)
T ss_dssp HHHHHHHHHHHTTT-----SEECCCCBSSEEEEECCTTC-----------CHHHHHHHHHHTTEECEEGGGGCGGGTTEE
T ss_pred HHHHHHHHHHHHHh-----cCccCCCeeEEEEEECCCCC-----------CHHHHHHHHHHCCEEEcCchhhCCCCCCeE
Confidence 77777787777654 112223 3556777775321 1346888999999999874 3579
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 477 MMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 477 Ri~p~~~~t~e~id~~~~~l~~~l 500 (514)
||+++ .++++|++++++|++++
T Consensus 354 Ris~~--~~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 354 RIALV--RPLEELLEAAKRIREAL 375 (376)
T ss_dssp EEECC--SCHHHHHHHHHHHHHTC
T ss_pred EEEec--CCHHHHHHHHHHHHHHh
Confidence 99965 48999999999998764
No 58
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.96 E-value=6.7e-28 Score=245.59 Aligned_cols=323 Identities=15% Similarity=0.154 Sum_probs=223.2
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-----cCCCCeEEEeCChh
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-----ASKMAKVFFTNSGS 172 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-----~~~~~~v~~~~sGs 172 (514)
+|+.++||.++.. .+|+ +|.+.+++.+++++....+. ......++.+.+++++. ..+.+++++++||+
T Consensus 27 ~g~~~i~l~~~~~--~~~~-~~~v~~a~~~~~~~~~~~y~----~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~ 99 (370)
T 2z61_A 27 EGKKVIHLEIGEP--DFNT-PKPIVDEGIKSLKEGKTHYT----DSRGILELREKISELYKDKYKADIIPDNIIITGGSS 99 (370)
T ss_dssp TTCCCEECCCCSC--SSCC-CHHHHHHHHHHHHTTCCSCC----CTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHH
T ss_pred cCCCEEEccCCCC--CCCC-CHHHHHHHHHHHHcCccCCC----CCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCChH
Confidence 4788999988753 5776 89999999999876322111 11123455555555542 13457899999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250 173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY 252 (514)
Q Consensus 173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (514)
+|++.+++.+. .++++|++.+++||+........ |... ..++
T Consensus 100 ~a~~~~~~~~~--------~~gd~vl~~~p~~~~~~~~~~~~-g~~~------------~~v~----------------- 141 (370)
T 2z61_A 100 LGLFFALSSII--------DDGDEVLIQNPCYPCYKNFIRFL-GAKP------------VFCD----------------- 141 (370)
T ss_dssp HHHHHHHHHHC--------CTTCEEEEESSCCTHHHHHHHHT-TCEE------------EEEC-----------------
T ss_pred HHHHHHHHHhc--------CCCCEEEEeCCCchhHHHHHHHc-CCEE------------EEeC-----------------
Confidence 99999999873 23478999999999976443322 2111 0011
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceeccc-CC
Q 010250 253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKY-SI 331 (514)
Q Consensus 253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~-gv 331 (514)
.+.++|++.+. +++++|+++.+++++|.+.+ ++ |.++|++||+++|+||+|+++.+.|.......+ +.
T Consensus 142 --~d~~~l~~~l~----~~~~~v~~~~p~nptG~~~~----~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 210 (370)
T 2z61_A 142 --FTVESLEEALS----DKTKAIIINSPSNPLGEVID----RE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDEN 210 (370)
T ss_dssp --SSHHHHHHHCC----SSEEEEEEESSCTTTCCCCC----HH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTT
T ss_pred --CCHHHHHHhcc----cCceEEEEcCCCCCcCcccC----HH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCC
Confidence 01467777664 35677777777888898877 45 999999999999999999988666643333222 11
Q ss_pred -CCch--hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH-Hhh--ccHHHHHH
Q 010250 332 -KPDL--VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI-YKE--RNIVEQVN 405 (514)
Q Consensus 332 -~pDi--v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~-~~~--~~~~~~~~ 405 (514)
..|+ .+++|.++.+++++|++++++++++.+.. ..+..+++.++++++++.++|+. .++ +++.++++
T Consensus 211 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 283 (370)
T 2z61_A 211 LEKTILINGFSKLYAMTGWRIGYVISNDEIIEAILK-------LQQNLFISAPTISQYAALKAFEKETEREINSMIKEFD 283 (370)
T ss_dssp CSSEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHH-------HHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecChhccCCccceEEEEEECHHHHHHHHH-------HHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 2243 37899997333899999999999988863 23445778899999999888875 222 34677888
Q ss_pred HHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEE
Q 010250 406 KIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIM 477 (514)
Q Consensus 406 ~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iR 477 (514)
++.+++.+.|+++ ...... ...|.++++++.. . ...+.+.|+ ++||.+.++ .+.+|
T Consensus 284 ~~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~~-~------------~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~R 347 (370)
T 2z61_A 284 RRRRLVLKYVKDF-GWEVNN--PIGAYYVFPNIGE-D------------GREFAYKLLKEKFVALTPGIGFGSKGKNYIR 347 (370)
T ss_dssp HHHHHHHHHHHHT-TCBCCC--CCBTTEECCBCSS-C------------HHHHHHHHHHHHCEECEEGGGGCGGGSSBEE
T ss_pred HHHHHHHHHHHHc-CCeecC--CCcceEEEEecCC-C------------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEE
Confidence 8899999999876 322221 1124445555532 1 345778887 789999874 35799
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 478 MSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 478 i~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
++++ +++++|++++++|+++++
T Consensus 348 i~~~--~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 348 ISYA--NSYENIKEGLERIKEFLN 369 (370)
T ss_dssp EECC--SCHHHHHHHHHHHHHHHC
T ss_pred EEEe--CCHHHHHHHHHHHHHHHh
Confidence 9977 799999999999998764
No 59
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.96 E-value=1.3e-27 Score=244.87 Aligned_cols=342 Identities=11% Similarity=0.060 Sum_probs=229.0
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-CCCCeEEEeCChhHHHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKMAKVFFTNSGSEAND 176 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~~v~~~~sGseA~~ 176 (514)
+|+.++||.+|.. .+| .+|.+.+++.+++++....+....+..+....+++.+.+.++. .+.+++++++||++|++
T Consensus 28 ~g~~~i~l~~~~~--~~~-~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~ 104 (388)
T 1j32_A 28 EGIDVCSFSAGEP--DFN-TPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIF 104 (388)
T ss_dssp TTCCCEECCCSSC--SSC-CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHH
T ss_pred cCCCEEECCCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHH
Confidence 6889999988853 466 5899999999998653211111111233344444444443321 24578999999999999
Q ss_pred HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC--cccCCCCCCChhHHHH
Q 010250 177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH--YWRYAHPGETEEEYST 254 (514)
Q Consensus 177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 254 (514)
.+++.++ .++++|++.+++||+...... ..|... ..++... .|.
T Consensus 105 ~~~~~~~--------~~gd~vl~~~~~~~~~~~~~~-~~g~~~------------~~v~~~~~~~~~------------- 150 (388)
T 1j32_A 105 NLMLAMI--------EPGDEVIIPAPFWVSYPEMVK-LAEGTP------------VILPTTVETQFK------------- 150 (388)
T ss_dssp HHHHHHC--------CTTCEEEEESSCCTHHHHHHH-HTTCEE------------EEECCCGGGTTC-------------
T ss_pred HHHHHhc--------CCCCEEEEcCCCChhHHHHHH-HcCCEE------------EEecCCcccCCC-------------
Confidence 9999873 234689999999998754322 222111 1111110 010
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc----eec--c
Q 010250 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF----GCD--K 328 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~----~~~--~ 328 (514)
.+.++|++.+. +++++|+++++++++|.+. +++.+++|.++|++||+++|+||+|+++.+.|..+ ... .
T Consensus 151 ~d~~~l~~~l~----~~~~~v~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 225 (388)
T 1j32_A 151 VSPEQIRQAIT----PKTKLLVFNTPSNPTGMVY-TPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEA 225 (388)
T ss_dssp CCHHHHHHHCC----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHH
T ss_pred CCHHHHHHhcC----cCceEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccc
Confidence 11467776664 3577788777788888775 56899999999999999999999999887666421 111 1
Q ss_pred cCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHH
Q 010250 329 YSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNK 406 (514)
Q Consensus 329 ~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~ 406 (514)
++..+++.+++|.++.+++++|++++++++++.+.. ....++++.+++++.++.++|+...+ +++.+++++
T Consensus 226 ~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 298 (388)
T 1j32_A 226 YERSVVCSGFAKTYAMTGWRVGFLAGPVPLVKAATK-------IQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAE 298 (388)
T ss_dssp HHTEEEEEESTTTTTCTTTCCEEEECCHHHHHHHHH-------HHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHH
T ss_pred cCCEEEEeechhccCCcccceEEEEeCHHHHHHHHH-------HHhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence 334455668999997333899999999999888863 23446788889999988888873221 345677888
Q ss_pred HHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee-----CCEEEEe
Q 010250 407 IAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-----GDNIMMS 479 (514)
Q Consensus 407 ~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~-----g~~iRi~ 479 (514)
+++++.+.|+++....+. .+. |.+.++.+.... . ....+.+.|.+ +||.+.++ .+.+|++
T Consensus 299 ~~~~l~~~L~~~~g~~~~---~~~~~~~~~~~~~~~~--~--------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis 365 (388)
T 1j32_A 299 RRRYMLDALNAMPGLECP---KPDGAFYMFPSIAKTG--R--------SSLDFCSELLDQHQVATVPGAAFGADDCIRLS 365 (388)
T ss_dssp HHHHHHHHHHTCTTCBCC---CCCBTTEECCBCGGGT--C--------CHHHHHHHHHHHHCEECEEGGGGTCTTBEEEE
T ss_pred HHHHHHHHHhhCCCCccc---CCCeeEEEEEecCCCC--C--------CHHHHHHHHHHhCCEEEeChhhhCCCCcEEEE
Confidence 888898888775322221 222 333444443210 0 14567788876 79999875 3679999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 480 PPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 480 p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
++ +++++|++++++|+++++++
T Consensus 366 ~~--~~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 366 YA--TDLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp CC--SCHHHHHHHHHHHHHHHHHH
T ss_pred ec--CCHHHHHHHHHHHHHHHHHh
Confidence 65 79999999999999988654
No 60
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.96 E-value=4.7e-27 Score=241.98 Aligned_cols=334 Identities=17% Similarity=0.174 Sum_probs=229.7
Q ss_pred CCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250 98 NGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE 173 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse 173 (514)
||++|+||.++ .++|+ .+|+|.+|+.+++++.... +....+..+...+++++|+++++. +..++.++|++
T Consensus 44 ~g~~~i~~~~~---~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~---~~~i~~~sG~~ 117 (401)
T 2bwn_A 44 GKQDITVWCGN---DYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQK---EAALVFSSAYN 117 (401)
T ss_dssp CEEEEEECSCS---CTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTC---SEEEEESCHHH
T ss_pred CCCcEEEeeCC---CcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCC---CcEEEECCcHH
Confidence 68999999886 45565 3789999999998763221 112223456778999999999842 34555588888
Q ss_pred HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHH
Q 010250 174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS 253 (514)
Q Consensus 174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (514)
++..+++++... .+++.|++.++.|++.. ..+...|... ..++..
T Consensus 118 a~~~~~~~l~~~------~~gd~Vl~~~~~~~~~~-~~~~~~g~~~------------~~v~~~---------------- 162 (401)
T 2bwn_A 118 ANDATLSTLRVL------FPGLIIYSDSLNHASMI-EGIKRNAGPK------------RIFRHN---------------- 162 (401)
T ss_dssp HHHHHHHHHHHH------STTCEEEEETTCCHHHH-HHHHHSCCCE------------EEECTT----------------
T ss_pred HHHHHHHHHhcC------CCCCEEEECchhhHHHH-HHHHHcCCeE------------EEEcCC----------------
Confidence 999998864311 12356766665555433 2222222211 111110
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-C-cccccccceecccCC
Q 010250 254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-A-FGRLGTMFGCDKYSI 331 (514)
Q Consensus 254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G-~gr~G~~~~~~~~gv 331 (514)
+.++|++++.+..++++++|+++++++++|.+.| +++|.++|++||+++|+||+|+ | ||+.|..+. ..+++
T Consensus 163 --d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~-~~~~~ 235 (401)
T 2bwn_A 163 --DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGP----IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVA-ERDGL 235 (401)
T ss_dssp --CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHH-HHHTC
T ss_pred --CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCC----HHHHHHHHHHcCCEEEEeccccccccCCCCceee-eccCc
Confidence 1578888887654346789999999999999887 9999999999999999999999 3 466665443 44554
Q ss_pred --CCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh---ccHHHHH
Q 010250 332 --KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQV 404 (514)
Q Consensus 332 --~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~~~~ 404 (514)
.+|++ ++||+++.. -|++++++++++.+.... .. ..++.+.++++++++.++++.+++ +++.+++
T Consensus 236 ~~~~~i~~~s~sK~~~~~---GG~~~~~~~~~~~l~~~~---~~--~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~ 307 (401)
T 2bwn_A 236 MHRIDIFNGTLAKAYGVF---GGYIAASARMVDAVRSYA---PG--FIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQ 307 (401)
T ss_dssp GGGCSEEEEESSSTTCSC---CEEEEECHHHHHHHHHHC---HH--HHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred cccCcEEEeechhhccCC---CCEEecCHHHHHHHHHhC---cC--ceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 24554 799999852 278888999888876311 01 112334467888889999998865 3678889
Q ss_pred HHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------C-CE
Q 010250 405 NKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------G-DN 475 (514)
Q Consensus 405 ~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g-~~ 475 (514)
+++++++.+.|+++ ...+.. ..|.++.+.+.+.. ....+.+.|+ ++||.+.+. + +.
T Consensus 308 ~~~~~~l~~~L~~~-g~~~~~---~~~~~~~~~~~~~~-----------~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~ 372 (401)
T 2bwn_A 308 QMHAKVLKMRLKAL-GMPIID---HGSHIVPVVIGDPV-----------HTKAVSDMLLSDYGVYVQPINFPTVPRGTER 372 (401)
T ss_dssp HHHHHHHHHHHHHH-TCCBCC---CSSSCEEEECCCHH-----------HHHHHHHHHHHHHCEECCEECTTTSCTTCCE
T ss_pred HHHHHHHHHHHHHC-CCcccC---CCCCeEEEEeCChH-----------HHHHHHHHHHhcCCEEEeecCCCCCCCCCce
Confidence 99999999999886 433332 23457777764210 2456778886 789999764 2 47
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 476 IMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 476 iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
+|++++..+|++|+++++++|++++++
T Consensus 373 iRis~~~~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 373 LRFTPSPVHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp EEECCCTTSCHHHHHHHHHHHHHHC--
T ss_pred EEEEeeCCCCHHHHHHHHHHHHHHHHh
Confidence 999999989999999999999988754
No 61
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.96 E-value=2e-28 Score=251.62 Aligned_cols=352 Identities=11% Similarity=0.031 Sum_probs=236.4
Q ss_pred CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc--
Q 010250 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-- 159 (514)
Q Consensus 82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-- 159 (514)
.|+....+.+.+++|.+|+++|||.+|. ..++ .+|.|.+|+.++++....|... .+..+....+++.+.+.++.
T Consensus 12 ~~~~~~~~~~~~~~~~~g~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~y~~~-~g~~~lr~~la~~l~~~~g~~~ 87 (396)
T 3jtx_A 12 YPFARLHEAMQGISAPEGMEAVPLHIGE--PKHP-TPKVITDALTASLHELEKYPLT-AGLPELRQACANWLKRRYDGLT 87 (396)
T ss_dssp CHHHHHHHHTTTCCCCTTCCCEECSCCS--CCSC-CCHHHHHHHHHTGGGGGSCCCT-TCCHHHHHHHHHHHHHHTTTCC
T ss_pred ChHHHHHHHHHhhhhccCCCeEEeCCcC--CCCC-CCHHHHHHHHHHhhhccCCCCC-CCcHHHHHHHHHHHHHhcCCCC
Confidence 3344446677778899999999999886 3455 6899999999988654333211 22345556667776665532
Q ss_pred CCCC-eEEEeCChhHHHHHHHHHHHHHHhhcCCCC----ccEEEEEecCCcccceeeeecCCCccccCCCCCCCCccccc
Q 010250 160 SKMA-KVFFTNSGSEANDTQVKLVWYYNNALGRPN----KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHT 234 (514)
Q Consensus 160 ~~~~-~v~~~~sGseA~~~Alk~a~~~~~~~~~~~----~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~ 234 (514)
.+.+ ++++++||++|++.+++.+. .++ +++|++.+++||+........+.... .+
T Consensus 88 ~~~~~~i~~t~g~~~al~~~~~~~~-------~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~-------------~v 147 (396)
T 3jtx_A 88 VDADNEILPVLGSREALFSFVQTVL-------NPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIH-------------FA 147 (396)
T ss_dssp CCTTTSEEEESSHHHHHHHHHHHHC-------CC---CCCCEEEEEESCCHHHHHHHHHTTCEEE-------------EE
T ss_pred CCCCCeEEEcCCcHHHHHHHHHHHh-------CCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEE-------------Ee
Confidence 2356 89999999999999998873 132 26899999999987654333222111 01
Q ss_pred CC-CCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEech
Q 010250 235 DC-PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV 313 (514)
Q Consensus 235 ~~-~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv 313 (514)
+. ++.|.. ++++|++.+.. ++++|+++..++++|.+. +.+.+++|.++|++||+++|+||+
T Consensus 148 ~~~~~g~~~-------------d~~~l~~~~~~----~~~~v~l~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~ 209 (396)
T 3jtx_A 148 NCPAPSFNP-------------DWRSISEEVWK----RTKLVFVCSPNNPSGSVL-DLDGWKEVFDLQDKYGFIIASDEC 209 (396)
T ss_dssp ECCTTTCCC-------------CGGGSCHHHHH----TEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHCCEEEEECT
T ss_pred ecCCCCCcc-------------CHHHHHHhhcc----CcEEEEEECCCCCCCCcC-CHHHHHHHHHHHHHcCCEEEEEcc
Confidence 11 000100 13556666653 455666655577778765 456799999999999999999999
Q ss_pred hcCccccc-ccceec--------ccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHH
Q 010250 314 ICAFGRLG-TMFGCD--------KYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVS 384 (514)
Q Consensus 314 ~tG~gr~G-~~~~~~--------~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~ 384 (514)
|++|.+.| ...... .++...++.++||.++.+++++|++++++++++.+.. ..+..+++.++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 282 (396)
T 3jtx_A 210 YSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLL-------YRTYHGSAMSIPV 282 (396)
T ss_dssp TTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECHHHHHHHHH-------HHHHHTCCCCHHH
T ss_pred ccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCHHHHHHHHH-------HHhhcccCCCHHH
Confidence 99988777 333221 1344455668999876544899999999999988864 2344577889999
Q ss_pred HHHHHHHHHHHh-hccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH
Q 010250 385 CAVAIEALKIYK-ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE 463 (514)
Q Consensus 385 ~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 463 (514)
++++.++|+..+ -++..++++++.+.+.+.|+++ .+.. ....|.++++.+.... ...+...|+
T Consensus 283 ~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~--~~~~~~~~~~~~~~~~------------~~~~~~~l~ 346 (396)
T 3jtx_A 283 QRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQV--FDVK--LPDASFYIWLKVPDGD------------DLAFARNLW 346 (396)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTT--SCCC--CCSSSSEEEEECTTSC------------HHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc--CCcc--CCCeeEEEEEECCCCC------------HHHHHHHHH
Confidence 999988886311 1234566677777777777654 1111 1223667777775411 345777775
Q ss_pred -HCCcEEEee-------------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 464 -KHGMLVRVS-------------GDNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 464 -~~Gv~~~~~-------------g~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
++||++.++ .+.|||++. .++++|++++++|++++
T Consensus 347 ~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 347 QKAAIQVLPGRFLARDTEQGNPGEGYVRIALV--ADVATCVKAAEDIVSLY 395 (396)
T ss_dssp HHHCEECEEGGGGCCCCTTCCTTTTEEEEECC--SCHHHHHHHHHHHHHHC
T ss_pred HHCCEEEeCChHhCCcccccCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 569999763 257999954 49999999999998764
No 62
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.92 E-value=8.7e-31 Score=269.31 Aligned_cols=357 Identities=10% Similarity=0.055 Sum_probs=232.6
Q ss_pred CeEEEeeeCcEEEeCCCC--EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-c
Q 010250 83 PLVIEKSEGSYVYDVNGK--KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-A 159 (514)
Q Consensus 83 p~~~~~~~G~~~~d~dG~--~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~ 159 (514)
+++..+++|+++||.+|+ .+|||.++. ..++ .+|++.+|+.+++++....+.. ...+....+++++.+.++ .
T Consensus 12 ~~~~~~~~g~~~~d~~g~~~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~y~~--~~~~l~~~la~~l~~~~g~~ 86 (392)
T 3b1d_A 12 TAPNRLSHHTYKWKETETDPQLLPAWIAD--MDFE-VMPEVKQAIHDYAEQLVYGYTY--ASDELLQAVLDWEKSEHQYS 86 (392)
Confidence 345677999999999999 999997774 2455 5899999999998653221111 122333344444443332 1
Q ss_pred CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250 160 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 239 (514)
Q Consensus 160 ~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 239 (514)
.+.++|++++||++|++.+++.+. .++++|++.+++||+........+.... .++..+
T Consensus 87 ~~~~~v~~~~g~~~a~~~~~~~~~--------~~gd~vl~~~p~~~~~~~~~~~~g~~~~-------------~~~~~~- 144 (392)
T 3b1d_A 87 FDKEDIVFVEGVVPAISIAIQAFT--------KEGEAVLINSPVYPPFARSVRLNNRKLV-------------SNSLKE- 144 (392)
Confidence 345789999999999999999874 2346899999999998654433221110 011100
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250 240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319 (514)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr 319 (514)
+ ...| ..++++|++.+.+ .++++|+++..++++|.+ ++++++++|+++|++||+++|+||+|++|++
T Consensus 145 -------~-~g~~-~~d~~~l~~~l~~---~~~~~v~~~~~~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~ 211 (392)
T 3b1d_A 145 -------E-NGLF-QIDFEQLENDIVE---NDVKLYLLCNPHNPGGRV-WEREVLEQIGHLCQKHHVILVSDEIHQDLTL 211 (392)
Confidence 0 0000 1234667666642 245667777777778876 4567899999999999999999999999977
Q ss_pred cccc----ceecc--cCCCCchhchhhhhc-CCcccceeEEeCH-HHHHHhhhccCCCCcccccCCC-CCcHHHHHHHHH
Q 010250 320 LGTM----FGCDK--YSIKPDLVSFAKALS-SAYMPIGAILVSP-EVSEVIHSQSNTLGSFSHGFTY-SGHPVSCAVAIE 390 (514)
Q Consensus 320 ~G~~----~~~~~--~gv~pDiv~~sK~l~-gG~~pig~v~~~~-~i~~~l~~~~~~~~~~~~~~t~-~~~pl~~aaa~a 390 (514)
.|.. +.... .+..+++.++||+++ +| +|+|++++++ ++++.+... ....++ +.++++++++.+
T Consensus 212 ~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~ 283 (392)
T 3b1d_A 212 FGHEHVSFNTVSPDFKDFALVLSSATKTFNIAG-TKNSYAIIENPTLCAQFKHQ-------QLVNNHHEVSSLGYIATET 283 (392)
Confidence 7632 22222 344466778999998 45 8999999875 588877631 222333 468899999988
Q ss_pred HHHHHhh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeE-EEEEccCCCCCCCCCCccchHHHHHHHHH-HCC
Q 010250 391 ALKIYKE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLIL-GTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHG 466 (514)
Q Consensus 391 al~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G 466 (514)
+|+..++ ++..++++++.+++.+.|++. .+.+..+++.|.++ ++++..... ....+.+.|+ ++|
T Consensus 284 ~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~i~~~~~~~----------~~~~l~~~l~~~~g 351 (392)
T 3b1d_A 284 AYRYGKPWLVALKAVLEENIQFAVEYFAQE--APRLKVMKPQGTYLIWLDFSDYGL----------TDDALFTLLHDQAK 351 (392)
Confidence 8874221 234555666666666666541 23334445566655 466643110 0234667786 789
Q ss_pred cEEEee-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 467 MLVRVS-------GDNIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 467 v~~~~~-------g~~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
|++.++ .+.+||+ +..++++|++++++|+++++
T Consensus 352 i~v~~g~~f~~~~~~~iRi~--~~~~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 352 VILNRGSDYGSEGELHARLN--IAAPKSLVEEICKRIVCCLP 391 (392)
Confidence 999864 2469999 55678999999999998874
No 63
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.96 E-value=2.1e-27 Score=243.85 Aligned_cols=340 Identities=13% Similarity=0.136 Sum_probs=220.9
Q ss_pred CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHH
Q 010250 97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEAN 175 (514)
Q Consensus 97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~ 175 (514)
.+|++||||.+|. ..++. +|+|++++.+++++....+....+..+....+++.+.+.++ +.+.++|++++||++|+
T Consensus 28 ~~g~~~i~l~~g~--~~~~~-~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al 104 (391)
T 3h14_A 28 EAGRRIIHMEVGQ--PGTGA-PRGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGF 104 (391)
T ss_dssp HTTCCCEECCCSS--CSSCS-CHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHH
T ss_pred hcCCCeEEccCCC--CCCCC-CHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHH
Confidence 4789999999886 34553 88999999999875322111111122333444444443332 13567999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250 176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255 (514)
Q Consensus 176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (514)
+.+++.+. ..+++|++.+++|++........ |... ..++......+. .
T Consensus 105 ~~~~~~l~--------~~gd~vl~~~p~~~~~~~~~~~~-g~~~------------~~v~~~~~~~~~-----------~ 152 (391)
T 3h14_A 105 LLAFTALF--------DSGDRVGIGAPGYPSYRQILRAL-GLVP------------VDLPTAPENRLQ-----------P 152 (391)
T ss_dssp HHHHHHHC--------CTTCEEEEEESCCHHHHHHHHHT-TCEE------------EEEECCGGGTTS-----------C
T ss_pred HHHHHHhc--------CCCCEEEEcCCCCccHHHHHHHc-CCEE------------EEeecCcccCCC-----------C
Confidence 99998773 23478999999999875333222 2111 011111000000 0
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCch
Q 010250 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL 335 (514)
Q Consensus 256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDi 335 (514)
++++|++. ++++|+++..++++|.+. +.+.+++|.++|++||+++|+||+|++|.+.|....... ..+++
T Consensus 153 d~~~l~~~-------~~~~v~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~--~~~~~ 222 (391)
T 3h14_A 153 VPADFAGL-------DLAGLMVASPANPTGTML-DHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALE--LTDEC 222 (391)
T ss_dssp CHHHHTTS-------CCSEEEEESSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGG--TCSSS
T ss_pred CHHHHHhc-------CCeEEEECCCCCCCCccC-CHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhh--cCCCE
Confidence 13444432 345666666677888765 557799999999999999999999999877765322222 23343
Q ss_pred h---chhhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHH
Q 010250 336 V---SFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPK 410 (514)
Q Consensus 336 v---~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~ 410 (514)
+ ++||.++ .| +++|++++++++++.+.. .....+++.++++++++.++++..+ -++..++++++.++
T Consensus 223 i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 294 (391)
T 3h14_A 223 YVINSFSKYFSMTG-WRVGWMVVPEDQVRVVER-------IAQNMFICAPHASQVAALAALDCDAELQANLDVYKANRKL 294 (391)
T ss_dssp EEEEESSSTTCCTT-SCCEEEECCGGGHHHHHH-------HHHHTTCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred EEEEechhccCCcc-ceeEEEEeCHHHHHHHHH-------HHhhhccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 3 7899997 55 899999999999888863 2345677889999999888887111 12456677778888
Q ss_pred HHhhhhhccCCCceeEEEeee-eeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee--------CCEEEEeC
Q 010250 411 FQDGVKAFSDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS--------GDNIMMSP 480 (514)
Q Consensus 411 l~~~L~~l~~~~~~~~v~g~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~--------g~~iRi~p 480 (514)
+.+.|+++ +....+++.| .++.+.+..... ....+.+.|+++ ||++.++ .+.||+++
T Consensus 295 l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~ 361 (391)
T 3h14_A 295 MLERLPKA---GFTRIAPPDGAFYVYADVSDLTD----------DSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSY 361 (391)
T ss_dssp HHHHHHHH---TCCCBCCCCBTTEEEEECTTTCS----------CHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEEC
T ss_pred HHHHHHHc---CCCcccCCCeeEEEEEecCccCC----------CHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEe
Confidence 88888776 2222223333 556666653111 145677887775 9999863 24799996
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 481 PFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 481 ~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
+. ++++|++++++|++++++..
T Consensus 362 ~~--~~~~i~~~l~~l~~~~~~~~ 383 (391)
T 3h14_A 362 AR--ATADIEEGLDRLEAFMQARG 383 (391)
T ss_dssp CS--CHHHHHHHHHHHHHHHHHC-
T ss_pred cC--CHHHHHHHHHHHHHHHHHhc
Confidence 54 89999999999999887544
No 64
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.96 E-value=4.8e-28 Score=249.17 Aligned_cols=343 Identities=15% Similarity=0.101 Sum_probs=234.6
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ 178 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A 178 (514)
++++|||.+|.. ...||.+|++.+++.+++++.......+. ......++.+.++++++ .+.++|++++||++|++.+
T Consensus 31 ~~~~i~l~~g~~-~~~~~~~~~v~~a~~~~~~~~~~~~~~y~-~~~~~~~l~~~la~~~g-~~~~~v~~~~g~~~al~~~ 107 (397)
T 2zyj_A 31 RPGILSFAGGLP-APELFPKEEAAEAAARILREKGEVALQYS-PTEGYAPLRAFVAEWIG-VRPEEVLITTGSQQALDLV 107 (397)
T ss_dssp STTCEEESSCCC-CGGGCCHHHHHHHHHHHHHHHHHHHTSCC-CTTCCHHHHHHHHHHHT-SCGGGEEEESHHHHHHHHH
T ss_pred CCCceecCCCCC-CchhCCHHHHHHHHHHHHHhcchhhhCCC-CCCCCHHHHHHHHHHhC-CChhhEEEeccHHHHHHHH
Confidence 456899988865 44688999999999999875211000111 22345788888888874 4457899999999999999
Q ss_pred HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250 179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258 (514)
Q Consensus 179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (514)
++.+. .++++|++.+++||+........ |.... .++... + ..+++
T Consensus 108 ~~~~~--------~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~------------~~~~~~-----------~---~~d~~ 152 (397)
T 2zyj_A 108 GKVFL--------DEGSPVLLEAPSYMGAIQAFRLQ-GPRFL------------TVPAGE-----------E---GPDLD 152 (397)
T ss_dssp HHHHC--------CTTCEEEEEESCCHHHHHHHHTT-CCEEE------------EEEEET-----------T---EECHH
T ss_pred HHHhC--------CCCCEEEEeCCCcHHHHHHHHHc-CCEEE------------ecCcCC-----------C---CCCHH
Confidence 98763 23468999999999976443322 21110 111100 0 01257
Q ss_pred HHHHHHHHhCCCcEEEE-EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-ceecccCCC---C
Q 010250 259 NLEDLILKEGPETIAAF-IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGCDKYSIK---P 333 (514)
Q Consensus 259 ~le~li~~~~~~~~aav-ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~~~~gv~---p 333 (514)
+|++.+.+. ++++| ++...++.+|.+. +.+++++|.++|++||+++|+||+|+++++.|.. .....++.. +
T Consensus 153 ~l~~~l~~~---~~~~v~~~~~~~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 228 (397)
T 2zyj_A 153 ALEEVLKRE---RPRFLYLIPSFQNPTGGLT-PLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYP 228 (397)
T ss_dssp HHHHHHHHC---CCSCEEECCBSCTTTCCBC-CHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCC
T ss_pred HHHHHHhhc---CCeEEEECCCCcCCCCCcC-CHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCC
Confidence 888887642 34555 4555677778764 6789999999999999999999999998776653 222223222 2
Q ss_pred c---hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh---hccHHHHHHHH
Q 010250 334 D---LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK---ERNIVEQVNKI 407 (514)
Q Consensus 334 D---iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~---~~~~~~~~~~~ 407 (514)
+ +.+++|.++.| +++|++++++++++.+... .+..+++.++++++++.++|+... -++..++++++
T Consensus 229 ~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 300 (397)
T 2zyj_A 229 GVIYLGSFSKVLSPG-LRVAFAVAHPEALQKLVQA-------KQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREK 300 (397)
T ss_dssp CEEEEEESTTTTCGG-GCCEEEECCHHHHHHHHHH-------HHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHH
T ss_pred eEEEEeccccccccc-ceeEEEecCHHHHHHHHHH-------HHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 2 44789999955 8999999999998888631 233456678999998888886421 12345666777
Q ss_pred HHHHHhhhhhc-cCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---------CCEE
Q 010250 408 APKFQDGVKAF-SDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---------GDNI 476 (514)
Q Consensus 408 ~~~l~~~L~~l-~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------g~~i 476 (514)
.+++.+.|++. .. .+..+ ...|.++++++.... ....+.+.|.++||++.++ .+.+
T Consensus 301 ~~~l~~~L~~~~~~--g~~~~~~~~g~~~~~~~~~~~-----------~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~i 367 (397)
T 2zyj_A 301 AQAMLHALDREVPK--EVRYTRPKGGMFVWMELPKGL-----------SAEGLFRRALEENVAFVPGGPFFANGGGENTL 367 (397)
T ss_dssp HHHHHHHHHHHSCT--TSEECCCSBSSEEEEECSTTC-----------CHHHHHHHHHHTTEEEEESGGGCTTSCCTTEE
T ss_pred HHHHHHHHHHHCCC--CeEEccCCccEEEEEEcCCCC-----------CHHHHHHHHHHCCCEEechHHhcCCCCCCCeE
Confidence 77788877753 21 12211 234677788875311 1456888999999999863 3579
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 477 MMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 477 Ri~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
||+++.. |+++|++++++|+++++++.+
T Consensus 368 Ris~~~~-~~~~i~~~~~~l~~~l~~~~~ 395 (397)
T 2zyj_A 368 RLSYATL-DREGIAEGVRRLGRALKGLLA 395 (397)
T ss_dssp EEECSSS-CHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCC-CHHHHHHHHHHHHHHHHHHHh
Confidence 9998764 899999999999999977653
No 65
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.95 E-value=4.7e-27 Score=238.96 Aligned_cols=327 Identities=13% Similarity=0.079 Sum_probs=231.2
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ 178 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A 178 (514)
.+.+|||.++. +.++ .+|+|++|+.+++.+.... ..+.....++++.++++++....++++|++||++|++.+
T Consensus 29 ~~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~----~y~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~ 101 (367)
T 3euc_A 29 SHGLVKLDAME--NPYR-LPPALRSELAARLGEVALN----RYPVPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISML 101 (367)
T ss_dssp CTTCEECCSSC--CCCC-CCHHHHHHHHHHHHHHHTT----CSCCCCHHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHHH
T ss_pred CCCeeEccCCC--CCCC-CCHHHHHHHHHHhhhhhhh----cCCCCcHHHHHHHHHHHhCCCCcceEEEcCCHHHHHHHH
Confidence 36789998875 4455 7899999999998742110 112234678999999988432457999999999999999
Q ss_pred HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250 179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258 (514)
Q Consensus 179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (514)
++.+. ..+++|++.+++|++........+.. . ..++....|. .+++
T Consensus 102 ~~~~~--------~~gd~Vl~~~~~~~~~~~~~~~~g~~-~------------~~v~~~~~~~-------------~d~~ 147 (367)
T 3euc_A 102 ALAAA--------RPGAKVMAPVPGFVMYAMSAQFAGLE-F------------VGVPLRADFT-------------LDRG 147 (367)
T ss_dssp HHHTC--------CTTCEEEEEESCSCCSCHHHHTTTCE-E------------EEEECCTTSC-------------CCHH
T ss_pred HHHHc--------CCCCEEEEcCCCHHHHHHHHHHcCCe-E------------EEecCCCCCC-------------CCHH
Confidence 98763 23468999999999875443322211 1 1111111111 1157
Q ss_pred HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc--CCEEEEechhcCcccccccceecccCCCCchh
Q 010250 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY--DILFIADEVICAFGRLGTMFGCDKYSIKPDLV 336 (514)
Q Consensus 259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~--gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv 336 (514)
+|++.+... ++++|+++..++++|.+. +.+.+++|.++|++| |+++|+||+|++|+..+.....+.++...++.
T Consensus 148 ~l~~~l~~~---~~~~v~~~~~~nptG~~~-~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~ 223 (367)
T 3euc_A 148 AMLAAMAEH---QPAIVYLAYPNNPTGNLF-DAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMR 223 (367)
T ss_dssp HHHHHHHHH---CCSEEEEESSCTTTCCCC-CHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEE
T ss_pred HHHHHhhcc---CCCEEEEcCCCCCCCCCC-CHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEe
Confidence 788887642 345677777788888765 567799999999999 99999999999886544333334444445566
Q ss_pred chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHhhh
Q 010250 337 SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQDGV 415 (514)
Q Consensus 337 ~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L 415 (514)
++||. +.+++++|++++++++++.+... ..+++.++++++++.++|+..+. ++..++++++.+++.+.|
T Consensus 224 s~sK~-~~~G~r~G~~~~~~~~~~~~~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l 293 (367)
T 3euc_A 224 TVSKL-GLAGIRLGYVAGDPQWLEQLDKV---------RPPYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGM 293 (367)
T ss_dssp ECCCT-TSCSCCEEEEEECHHHHHHHGGG---------CCSSCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhh-cccccCceeeeeCHHHHHHHHHh---------CCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 89998 44348999999999999888642 23677899999999999876221 345677778888888888
Q ss_pred hhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-------CEEEEeCCCCCCHHH
Q 010250 416 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-------DNIMMSPPFIMSPEE 488 (514)
Q Consensus 416 ~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-------~~iRi~p~~~~t~e~ 488 (514)
+++ +.+....+.|.++.+.+. . ...+.+.|.++||++.++. +.||++.. |++|
T Consensus 294 ~~~---~g~~~~~~~~~~~~~~~~--~------------~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~---~~~~ 353 (367)
T 3euc_A 294 AAH---GGVTVFPSAANFLLARVP--D------------AAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVS---TPEE 353 (367)
T ss_dssp HTS---TTCEECCCSSSEEEEECS--C------------HHHHHHHHHTTTEECEECGGGCGGGTTEEEEECC---CHHH
T ss_pred HhC---CCcEECCCCCeEEEEECC--C------------HHHHHHHHHHCCeEEEECCccCCCCCCEEEEecC---CHHH
Confidence 765 333334556777777764 1 3457788999999998642 57999943 9999
Q ss_pred HHHHHHHHHHHH
Q 010250 489 VDELISKYGKAL 500 (514)
Q Consensus 489 id~~~~~l~~~l 500 (514)
+++++++|++++
T Consensus 354 i~~~~~~l~~~l 365 (367)
T 3euc_A 354 NAQFLEAFAASL 365 (367)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999999998876
No 66
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.95 E-value=2.3e-27 Score=246.50 Aligned_cols=350 Identities=15% Similarity=0.134 Sum_probs=232.9
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc----Cc--CCCCeEEEeCChh
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----TA--SKMAKVFFTNSGS 172 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~----~~--~~~~~v~~~~sGs 172 (514)
++.+|||.+|.. ...||.+|+|.+++.++++........+. ......++.+.+++++ +. .+.+++++++||+
T Consensus 42 ~~~~idl~~g~~-~~~~~~~~~v~~a~~~~~~~~~~~~~~y~-~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~ 119 (425)
T 1vp4_A 42 DKDAISFGGGVP-DPETFPRKELAEIAKEIIEKEYHYTLQYS-TTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQ 119 (425)
T ss_dssp STTCEECCCCSC-CGGGSCHHHHHHHHHHHHHHSHHHHTSCC-CTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHH
T ss_pred CCCceeCCCCCC-CcccCCHHHHHHHHHHHHhhcchhhcCCC-CCCCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHH
Confidence 456899998875 34588999999999999875310000011 1112344445555444 31 3457899999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250 173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY 252 (514)
Q Consensus 173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (514)
+|++.+++.+. .++++|++.+++||+........ |.... .++... +
T Consensus 120 ~al~~~~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~------------~v~~~~-----------~-- 165 (425)
T 1vp4_A 120 QALDLIGKLFL--------DDESYCVLDDPAYLGAINAFRQY-LANFV------------VVPLED-----------D-- 165 (425)
T ss_dssp HHHHHHHHHHC--------CTTCEEEEEESCCHHHHHHHHTT-TCEEE------------EEEEET-----------T--
T ss_pred HHHHHHHHHhC--------CCCCEEEEeCCCcHHHHHHHHHc-CCEEE------------EeccCC-----------C--
Confidence 99999998763 23478999999999976443322 21110 111100 0
Q ss_pred HHHHHHHHHHHHHHhC----CCcEEEEE-EccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-cee
Q 010250 253 STRLANNLEDLILKEG----PETIAAFI-AEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGC 326 (514)
Q Consensus 253 ~~~~~~~le~li~~~~----~~~~aavi-vEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~ 326 (514)
..++++|++.+.+.. ..++++|+ +...++.+|.+. +.+++++|.++|++||+++|+||+|++|.+.|.. ...
T Consensus 166 -~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~ 243 (425)
T 1vp4_A 166 -GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTT-SLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPI 243 (425)
T ss_dssp -EECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCH
T ss_pred -CCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcC-CHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCH
Confidence 012577887776410 12577764 555567778664 6789999999999999999999999988776653 222
Q ss_pred cccCCCCc---hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH--hh--cc
Q 010250 327 DKYSIKPD---LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY--KE--RN 399 (514)
Q Consensus 327 ~~~gv~pD---iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~--~~--~~ 399 (514)
..++..++ +.++||.++.| +|+|++++++++++.+... ....+++.|+++++++.++|+.. ++ ++
T Consensus 244 ~~~~~~~~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 315 (425)
T 1vp4_A 244 FKIGGPERVVLLNTFSKVLAPG-LRIGMVAGSKEFIRKIVQA-------KQSADLCSPAITHRLAARYLERYDLLEQLKP 315 (425)
T ss_dssp HHHHCTTTEEEEEESTTTTCGG-GCEEEEECCHHHHHHHHHH-------HHHHHSSCCHHHHHHHHHHHHHSCHHHHTHH
T ss_pred HHhCCCCCEEEEeccccccccc-cceEEEeeCHHHHHHHHHH-------hhhhcCCCCHHHHHHHHHHHhcCCHHHHHHH
Confidence 22222222 34789999955 8999999999998888631 23345667899999999998763 11 34
Q ss_pred HHHHHHHHHHHHHhhhhhc-cCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----
Q 010250 400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----- 472 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----- 472 (514)
..++++++.+++.+.|++. ...+.+..+ ...|.++++.+.+... ...+.+.|.++||++.++
T Consensus 316 ~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~-----------~~~l~~~l~~~gi~v~~g~~f~~ 384 (425)
T 1vp4_A 316 TIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGFD-----------TWEMFEYAKRKKVFYVPGRVFKV 384 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTCC-----------TTTTHHHHHHHTEECEEGGGGCT
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCCCCC-----------HHHHHHHHHHCCCEEECchhhcC
Confidence 5667778888888888764 221122222 3446788888753211 113667888889999863
Q ss_pred ----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250 473 ----GDNIMMSPPFIMSPEEVDELISKYGKALKATEER 506 (514)
Q Consensus 473 ----g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~ 506 (514)
.+.|||+++.. ++++|++++++|+++++++.++
T Consensus 385 ~~~~~~~iRis~~~~-~~e~i~~~l~~l~~~l~~~~~~ 421 (425)
T 1vp4_A 385 YDEPSPSMRLSFCLP-PDEKIVEGIKRLREVVLEYGKE 421 (425)
T ss_dssp TCCCCSEEEEECSSS-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHHHHHhh
Confidence 25799998764 8999999999999999876543
No 67
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.95 E-value=2.4e-27 Score=241.07 Aligned_cols=328 Identities=14% Similarity=0.158 Sum_probs=221.5
Q ss_pred EeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHH
Q 010250 95 YDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEA 174 (514)
Q Consensus 95 ~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA 174 (514)
++.||+++|||.++. +++| .+|++.+++.+++++...| +.....++.+.|+++++ .+.+++++++||++|
T Consensus 19 ~~~~~~~~idl~~~~--~~~~-~~~~v~~a~~~~~~~~~~y------~~~~~~~l~~~la~~~~-~~~~~v~~~~g~~~a 88 (364)
T 1lc5_A 19 LGISPDQLLDFSANI--NPLG-MPVSVKRALIDNLDCIERY------PDADYFHLHQALARHHQ-VPASWILAGNGETES 88 (364)
T ss_dssp HTSCGGGSEECSSCC--CTTC-CCHHHHHHHHHTGGGGGSC------CCTTCHHHHHHHHHHHT-SCGGGEEEESSHHHH
T ss_pred cCCCccceEEecccc--CCCC-CCHHHHHHHHHHHHHhhcC------CCCCHHHHHHHHHHHHC-cCHHHEEECCCHHHH
Confidence 346889999998875 4577 7899999999988653222 12235788999999884 345789999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC--cccCCCCCCChhHH
Q 010250 175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH--YWRYAHPGETEEEY 252 (514)
Q Consensus 175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 252 (514)
++.+++.+ ++ ++|++.+++||+........ |.... .++... .|.
T Consensus 89 l~~~~~~~---------~g-d~vl~~~p~y~~~~~~~~~~-g~~~~------------~v~~~~~~~~~----------- 134 (364)
T 1lc5_A 89 IFTVASGL---------KP-RRAMIVTPGFAEYGRALAQS-GCEIR------------RWSLREADGWQ----------- 134 (364)
T ss_dssp HHHHHHHH---------CC-SEEEEEESCCTHHHHHHHHT-TCEEE------------EEECCGGGTTC-----------
T ss_pred HHHHHHHc---------CC-CeEEEeCCCcHHHHHHHHHc-CCeEE------------EEeCCcccccc-----------
Confidence 99999876 23 68999999999976443332 21111 111110 000
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecc---c
Q 010250 253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDK---Y 329 (514)
Q Consensus 253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~---~ 329 (514)
. +++++.+..++..+.++++| ++++|.+ .+.+++++|.++|++||+++|+||+|++|++.|... .+. +
T Consensus 135 ----~--l~~~~~~~~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~ 205 (364)
T 1lc5_A 135 ----L--TDAILEALTPDLDCLFLCTP-NNPTGLL-PERPLLQAIADRCKSLNINLILDEAFIDFIPHETGF-IPALKDN 205 (364)
T ss_dssp ----C--CTTHHHHCCTTCCEEEEESS-CTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCS-GGGCTTC
T ss_pred ----h--hHHHHHhccCCCCEEEEeCC-CCCCCCC-CCHHHHHHHHHHhhhcCcEEEEECcChhhccCccch-hhHhccC
Confidence 0 12222222222334455667 6666765 467899999999999999999999999886544321 222 2
Q ss_pred CCCCchhchhhhhcCCcccceeEE-eCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHH
Q 010250 330 SIKPDLVSFAKALSSAYMPIGAIL-VSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKI 407 (514)
Q Consensus 330 gv~pDiv~~sK~l~gG~~pig~v~-~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~ 407 (514)
+....+.+++|.++.+++++|+++ +++++++.+... ..+++.|+++++++.++|+..+ -++..++++++
T Consensus 206 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 276 (364)
T 1lc5_A 206 PHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQ---------QMPWSVNALAALAGEVALQDSAWQQATWHWLREE 276 (364)
T ss_dssp TTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHH---------SCTTCSCHHHHHHHHHGGGCHHHHHHHHHHHHHH
T ss_pred CCEEEEEECchhhcCCccceEEEEECCHHHHHHHHHh---------CCCCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 222234478999983338999999 999999888742 1367789999999888886421 12345667777
Q ss_pred HHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------CCEEEEeC
Q 010250 408 APKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------GDNIMMSP 480 (514)
Q Consensus 408 ~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------g~~iRi~p 480 (514)
.+++.+.|+++ +.+...++.|.++.+.+.+. . ..+.+.|.++||.+.++ .+.+||+.
T Consensus 277 ~~~l~~~L~~~---~~~~~~~~~g~~~~~~~~~~--~-----------~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~ 340 (364)
T 1lc5_A 277 GARFYQALCQL---PLLTVYPGRANYLLLRCERE--D-----------IDLQRRLLTQRILIRSCANYPGLDSRYYRVAI 340 (364)
T ss_dssp HHHHHHHHHTS---TTEEECCCSSSEEEEEESCT--T-----------CCHHHHHHTTTEECEECTTSTTCCTTEEEEEC
T ss_pred HHHHHHHHhcC---CCCEECCCCCeEEEEECCCc--H-----------HHHHHHHHHCCcEEeeCcccCCCCCCEEEEEe
Confidence 77787777654 33333455677888877531 1 12668888999999874 25799993
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Q 010250 481 PFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 481 ~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
.+++|++++++.|++.++++
T Consensus 341 ---~~~~~~~~l~~~l~~~~~~~ 360 (364)
T 1lc5_A 341 ---RSAAQNERLLAALRNVLTGI 360 (364)
T ss_dssp ---CCHHHHHHHHHHHHHHC---
T ss_pred ---CCHHHHHHHHHHHHHHhhcc
Confidence 47899999999998887654
No 68
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.95 E-value=8e-27 Score=236.91 Aligned_cols=322 Identities=13% Similarity=0.076 Sum_probs=222.5
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ 178 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A 178 (514)
++++|||.+|. ++++ .+|+|++|+.++++....+ +.....++.++++++++ .+.+++++++||++|++.+
T Consensus 31 ~~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~y------~~~~~~~lr~~la~~~~-~~~~~v~~~~g~t~a~~~~ 100 (363)
T 3ffh_A 31 LTKITKLSSNE--NPLG-TSKKVAAIQANSSVETEIY------PDGWASSLRKEVADFYQ-LEEEELIFTAGVDELIELL 100 (363)
T ss_dssp CSCCEECSSCS--CTTC-CCHHHHHHHHTCBSCCCBC----------CHHHHHHHHHHHT-CCGGGEEEESSHHHHHHHH
T ss_pred CCceEEccCCC--CCCC-CCHHHHHHHHHHHHHhhcC------CCcchHHHHHHHHHHhC-CChhhEEEeCCHHHHHHHH
Confidence 46899998874 4566 6899999999877653322 23345788999999884 3457999999999999999
Q ss_pred HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250 179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258 (514)
Q Consensus 179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (514)
++... ..+++|++.+++|++........+... ..++....+. .+++
T Consensus 101 ~~~~~--------~~gd~vl~~~~~~~~~~~~~~~~g~~~-------------~~v~~~~~~~-------------~d~~ 146 (363)
T 3ffh_A 101 TRVLL--------DTTTNTVMATPTFVQYRQNALIEGAEV-------------REIPLLQDGE-------------HDLE 146 (363)
T ss_dssp HHHHC--------STTCEEEEEESSCHHHHHHHHHHTCEE-------------EEEECCTTSC-------------CCHH
T ss_pred HHHHc--------cCCCEEEEcCCChHHHHHHHHHcCCEE-------------EEecCCCCCC-------------cCHH
Confidence 98763 335689999999998654333222111 1111111111 0146
Q ss_pred HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCc----
Q 010250 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPD---- 334 (514)
Q Consensus 259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pD---- 334 (514)
++++.+. +++++|+++.+++++|.+.+ .+.+.+|.+.|++ |+++|+||+|++|++ |+..........+|
T Consensus 147 ~l~~~i~----~~~~~v~~~~p~nptG~~~~-~~~l~~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~ 219 (363)
T 3ffh_A 147 GMLNAID----EKTTIVWICNPNNPTGNYIE-LADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLII 219 (363)
T ss_dssp HHHHHCC----TTEEEEEEESSCTTTCCCCC-HHHHHHHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEE
T ss_pred HHHHhcc----cCCCEEEEeCCCCCcCCCcC-HHHHHHHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEE
Confidence 6766653 35778888777888898765 3444445444444 999999999998877 65433322222334
Q ss_pred hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHh
Q 010250 335 LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQD 413 (514)
Q Consensus 335 iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~ 413 (514)
+.++||.++.+++++|++++++++++.+... ..+++.++++++++.++|+..+. ++..++++++.+++.+
T Consensus 220 ~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ 290 (363)
T 3ffh_A 220 TRTFSKIYGLASARVGYGIADKEIIRQLNIV---------RPPFNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEA 290 (363)
T ss_dssp EEESSSTTCCSSCCCEEEEECHHHHHHHHHT---------CCSCCCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeechhhhcCchhceeeeecCHHHHHHHHHh---------CCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 4478999973338999999999999988742 13678899999999999973321 3456777778888888
Q ss_pred hhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCCCHHH
Q 010250 414 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSPEE 488 (514)
Q Consensus 414 ~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~t~e~ 488 (514)
.|+++. .+...++.|.++.+.+.. . ...+.+.|.++||++.++ ++.+|++++ |++|
T Consensus 291 ~l~~~~---g~~~~~~~~~~~~~~~~~-~------------~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~~ 351 (363)
T 3ffh_A 291 FAKRFE---KVKLYPANGNFVLIDLGI-E------------AGTIFSYLEKNGYITRSGAALGFPTAVRITIG---KEED 351 (363)
T ss_dssp HHHHCT---TCEECCCCSSEEEEECSS-C------------HHHHHHHHHHTTEECEETTTTTCTTEEEEECC---CHHH
T ss_pred HHhhCC---CceECCCCCeEEEEECCC-C------------HHHHHHHHHHCCeEEEeCccCCCCCeEEEECC---CHHH
Confidence 887631 222335567777777653 1 456888999999999874 367999954 9999
Q ss_pred HHHHHHHHHHH
Q 010250 489 VDELISKYGKA 499 (514)
Q Consensus 489 id~~~~~l~~~ 499 (514)
+++++++|+++
T Consensus 352 i~~~~~~l~~~ 362 (363)
T 3ffh_A 352 NSAVIALLEKL 362 (363)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 69
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.95 E-value=1.9e-27 Score=245.92 Aligned_cols=342 Identities=13% Similarity=0.117 Sum_probs=224.1
Q ss_pred CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc----Cc-CCC-CeEEEeCC
Q 010250 97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----TA-SKM-AKVFFTNS 170 (514)
Q Consensus 97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~----~~-~~~-~~v~~~~s 170 (514)
.+|+++|||.+|. ..+| .+|.|.+++.+++++.... . +. +.....++.+.+++++ +. .+. +++++++|
T Consensus 34 ~~g~~~idl~~g~--~~~~-~~~~v~~a~~~~~~~~~~~-~-y~-~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g 107 (412)
T 2x5d_A 34 RRGEDIIDLSMGN--PDGP-TPPHIVEKLCTVAQREDTH-G-YS-TSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIG 107 (412)
T ss_dssp HTTCCCEECSSCC--CCSC-CCHHHHHHHHHTC------------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESC
T ss_pred hcCCCEEecCCCC--CCCC-CCHHHHHHHHHHHhCCCCC-C-CC-CCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCC
Confidence 5789999998886 3567 7899999999988653110 0 11 1222345555665555 32 234 58999999
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChh
Q 010250 171 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 250 (514)
Q Consensus 171 GseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (514)
|++|++.+++.+. .++++|++.+++||+........ |... ..++... + .
T Consensus 108 ~~~a~~~~~~~~~--------~~gd~Vl~~~p~~~~~~~~~~~~-g~~~------------~~~~~~~--------~--~ 156 (412)
T 2x5d_A 108 SKEGLAHLMLATL--------DHGDTILVPNPSYPIHIYGAVIA-GAQV------------RSVPLVP--------G--I 156 (412)
T ss_dssp HHHHHHHHHHHHC--------CTTCEEEEEESCCHHHHHHHHHH-TCEE------------EEEECST--------T--S
T ss_pred hHHHHHHHHHHhC--------CCCCEEEEcCCCchhHHHHHHHc-CCEE------------EEeecCC--------c--c
Confidence 9999999998763 23468999999999976443322 2111 0111100 0 0
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-ceecc-
Q 010250 251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGCDK- 328 (514)
Q Consensus 251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~~~- 328 (514)
.+. .++++|++.+. + ++++|++...++.+|.+ .+.+++++|.++|++||+++|+||+|+++.+.|.. .....
T Consensus 157 ~~~-~d~~~l~~~i~---~-~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~ 230 (412)
T 2x5d_A 157 DFF-NELERAIRESI---P-KPRMMILGFPSNPTAQC-VELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQV 230 (412)
T ss_dssp CHH-HHHHHHHHTEE---S-CCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGS
T ss_pred CCC-CCHHHHHHhcc---c-CceEEEECCCCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhc
Confidence 111 23456655553 2 34445553335666765 46789999999999999999999999988766642 12221
Q ss_pred ---cCCCCchhchhhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHH
Q 010250 329 ---YSIKPDLVSFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVE 402 (514)
Q Consensus 329 ---~gv~pDiv~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~ 402 (514)
.+....+.++||.++ .| +++|++++++++++.+.. .....+++.++++++++.++|+..++ +++.+
T Consensus 231 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 302 (412)
T 2x5d_A 231 PGAKDIAVEFFTLSKSYNMAG-WRIGFMVGNPELVSALAR-------IKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAR 302 (412)
T ss_dssp TTGGGTEEEEEECC-CCSCTT-SCCEEEEECHHHHHHHHH-------HHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHH
T ss_pred cCccCcEEEEecCccccCCcc-cceEEEEcCHHHHHHHHH-------HHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHH
Confidence 222233457899997 45 899999999999988863 23345778899999999988874321 34677
Q ss_pred HHHHHHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee-------C
Q 010250 403 QVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-------G 473 (514)
Q Consensus 403 ~~~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~-------g 473 (514)
+++++.+++.+.|+++ ...+. .+. |.++++.+...... .....+...|++ +||++.++ .
T Consensus 303 ~~~~~~~~l~~~L~~~-g~~~~---~~~~g~~~~~~~~~~~~~--------~~~~~~~~~l~~~~gi~v~~g~~f~~~~~ 370 (412)
T 2x5d_A 303 QYQQRRDVLVKGLREA-GWMVE---NPKASMYVWAKIPEPYAH--------LGSLEFAKKLLQDAKVSVSPGIGFGDYGD 370 (412)
T ss_dssp HHHHHHHHHHHHHHHH-TCCCC---CCSBSSEEEEECCTTTGG--------GCHHHHHHHHHHHHCEECEEGGGGCGGGT
T ss_pred HHHHHHHHHHHHHHHC-CCEec---CCCeeeEEEEEcCCccCC--------CCHHHHHHHHHHHCCEEEeCchhhCCCCC
Confidence 7888889999988876 33322 233 55677777421100 013457778765 69999864 3
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 474 DNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 474 ~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+.|||+++. ++++|++++++|.++++++
T Consensus 371 ~~iRis~~~--~~~~l~~~l~~l~~~l~~~ 398 (412)
T 2x5d_A 371 DHVRFALIE--NRDRLRQAVRGIKAMFRAD 398 (412)
T ss_dssp TEEEEECCS--CHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEecC--CHHHHHHHHHHHHHHHHhc
Confidence 579999775 8999999999999998764
No 70
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.5e-27 Score=246.04 Aligned_cols=358 Identities=11% Similarity=0.085 Sum_probs=229.2
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcC--CccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTL--PFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEA 174 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~--~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA 174 (514)
.|+.+|||.+|.. .++ .+|.|.+++.+++++. ..|.. ..+..+....+++.+.+.++ ..+.++|++++||++|
T Consensus 55 ~~~~~i~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~a 130 (447)
T 3b46_A 55 QGRELINLGQGFF--SYS-PPQFAIKEAQKALDIPMVNQYSP-TRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEG 130 (447)
T ss_dssp TTSCCEECCCCSC--SSC-CCHHHHHHHHHHTTSGGGGSCCC-TTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHH
T ss_pred cCCCeEEccCCCC--CCC-CCHHHHHHHHHHHhCcCCCCCCC-CCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHH
Confidence 5678999988853 455 6899999999998752 11211 11122333344444433332 1234689999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250 175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254 (514)
Q Consensus 175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
++.+++.+. ..+++|++.+++||+........+. ......................|.
T Consensus 131 l~~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~g~-~~~~v~~~~~~~~~~~~~~~~~~~------------- 188 (447)
T 3b46_A 131 ILSCLMGLL--------NAGDEVIVFEPFFDQYIPNIELCGG-KVVYVPINPPKELDQRNTRGEEWT------------- 188 (447)
T ss_dssp HHHHHHHHC--------CTTCEEEEEESCCTTHHHHHHHTTC-EEEEEEEECCGGGGTSCBCSTTSE-------------
T ss_pred HHHHHHHHc--------CCCCEEEEeCCCchhHHHHHHHcCC-EEEEEeCCCccccccccccccCcc-------------
Confidence 999999873 3357899999999987543322221 111000000000000000000011
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce---e--ccc
Q 010250 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG---C--DKY 329 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~---~--~~~ 329 (514)
.++++|++.+. +++++|+++..++.+|.+. +++++++|.++|++||+++|+||+|+++.+.|.... . +.+
T Consensus 189 ~d~~~l~~~l~----~~~~~v~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~ 263 (447)
T 3b46_A 189 IDFEQFEKAIT----SKTKAVIINTPHNPIGKVF-TREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIG 263 (447)
T ss_dssp ECHHHHHTTCC----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHH
T ss_pred cCHHHHHHhhc----cCCeEEEEeCCCCCCCccc-CHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCC
Confidence 11466666553 4577788887788888765 578999999999999999999999999877663211 1 123
Q ss_pred CCCCchhchhhhhcCCcccceeEEe-CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc----cHHHHH
Q 010250 330 SIKPDLVSFAKALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER----NIVEQV 404 (514)
Q Consensus 330 gv~pDiv~~sK~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~----~~~~~~ 404 (514)
+..+++.++||.++.+++++|++++ ++++++.+.. ..+..+++.++++++++.++|+....+ ++.+++
T Consensus 264 ~~~i~i~S~sK~~~~~G~riG~~~~~~~~l~~~l~~-------~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~ 336 (447)
T 3b46_A 264 QLTLTVGSAGKSFAATGWRIGWVLSLNAELLSYAAK-------AHTRICFASPSPLQEACANSINDALKIGYFEKMRQEY 336 (447)
T ss_dssp TTEEEEEEHHHHTTCTTSCCEEEECSCHHHHHHHHH-------HHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred CcEEEEecCchhcCCcchhhEEEEeCCHHHHHHHHH-------HHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHH
Confidence 5555566899999833389999999 9999988863 133457788899999999999876322 356778
Q ss_pred HHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCC-CCC---ccchHHHHHHHHH-HCCcEEEee-------
Q 010250 405 NKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEP-FPP---EWGIGAYFGAQCE-KHGMLVRVS------- 472 (514)
Q Consensus 405 ~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~-~~~---~~~~~~~~~~~l~-~~Gv~~~~~------- 472 (514)
+++++++.+.|+++ ..... ....|.++++++.....+... ++. .......++..|. ++||++.++
T Consensus 337 ~~~~~~l~~~L~~~-g~~~~--~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~ 413 (447)
T 3b46_A 337 INKFKIFTSIFDEL-GLPYT--APEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKE 413 (447)
T ss_dssp HHHHHHHHHHHHHH-TCCEE--CCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGG
T ss_pred HHHHHHHHHHHHHC-CCeec--CCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCC
Confidence 88888888888876 33322 233467778887542111000 000 0012446777776 589999864
Q ss_pred -----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250 473 -----GDNIMMSPPFIMSPEEVDELISKYGK 498 (514)
Q Consensus 473 -----g~~iRi~p~~~~t~e~id~~~~~l~~ 498 (514)
.+.|||+++ .++++|++++++|++
T Consensus 414 ~~~~~~~~iRls~~--~~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 414 HEKAAENLLRFAVC--KDDAYLENAVERLKL 442 (447)
T ss_dssp GGGGGTTEEEEECC--SCHHHHHHHHHHGGG
T ss_pred ccCCCCCEEEEEEe--CCHHHHHHHHHHHHH
Confidence 357999965 589999999999876
No 71
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.95 E-value=7.6e-27 Score=239.32 Aligned_cols=339 Identities=12% Similarity=0.095 Sum_probs=226.4
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-CCCCe-EEEeCChhHHHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKMAK-VFFTNSGSEANDT 177 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~~-v~~~~sGseA~~~ 177 (514)
+.++||.++. ..+| .+|++.+++.+++++....+....+..+....+++.+.+.++. .+.++ +++++||++|++.
T Consensus 26 ~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~ 102 (389)
T 1gd9_A 26 KDVISLGIGE--PDFD-TPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLM 102 (389)
T ss_dssp SSCEECCCCS--CSSC-CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHH
T ss_pred cCeEecCCCC--CCCC-CCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHH
Confidence 3578998775 3466 6899999999998763221111111223334444444443331 24578 9999999999999
Q ss_pred HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC--cccCCCCCCChhHHHHH
Q 010250 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH--YWRYAHPGETEEEYSTR 255 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 255 (514)
+++.+. .++++|++.+++||+....... .|... ..++... .|. .
T Consensus 103 ~~~~~~--------~~gd~vl~~~~~~~~~~~~~~~-~g~~~------------~~v~~~~~~~~~-------------~ 148 (389)
T 1gd9_A 103 GLSAFL--------KDGEEVLIPTPAFVSYAPAVIL-AGGKP------------VEVPTYEEDEFR-------------L 148 (389)
T ss_dssp HHTTTC--------CTTCEEEEEESCCTTHHHHHHH-HTCEE------------EEEECCGGGTTC-------------C
T ss_pred HHHHhC--------CCCCEEEEcCCCchhHHHHHHH-CCCEE------------EEeccCCccCCC-------------C
Confidence 998763 2357899999999997543322 22111 1111110 010 0
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc-cceeccc-CC-C
Q 010250 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MFGCDKY-SI-K 332 (514)
Q Consensus 256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~-~~~~~~~-gv-~ 332 (514)
++++|++.+. +++++|+++..++.+|.+. +++.+++|.++|++||+++|+||+|+++.+.|. ......+ +. .
T Consensus 149 d~~~l~~~l~----~~~~~v~~~~~~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 223 (389)
T 1gd9_A 149 NVDELKKYVT----DKTRALIINSPCNPTGAVL-TKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFE 223 (389)
T ss_dssp CHHHHHHHCC----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGG
T ss_pred CHHHHHHhcC----cCceEEEEECCCCCCCcCC-CHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCC
Confidence 1467777664 2567777777788788764 578999999999999999999999998877665 2222222 21 2
Q ss_pred Cch--hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh----ccHHHHHHH
Q 010250 333 PDL--VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE----RNIVEQVNK 406 (514)
Q Consensus 333 pDi--v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~----~~~~~~~~~ 406 (514)
.|+ .+++|.++.+++|+|++++++++++.+.. ..+..+++.++++++++.++|+...+ +++.+++++
T Consensus 224 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 296 (389)
T 1gd9_A 224 RTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVK-------FQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDR 296 (389)
T ss_dssp GEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHH-------HHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CEEEEecChhhcCCcccceEEEEECHHHHHHHHH-------HHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHH
Confidence 354 36899997333899999999999988864 23445778889999999888875433 345677888
Q ss_pred HHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEEE
Q 010250 407 IAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMM 478 (514)
Q Consensus 407 ~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iRi 478 (514)
+.+++.+.|+++ ...+.. ...|.++++.+..... ....+.+.|+ ++||++.++ .+.+||
T Consensus 297 ~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi 363 (389)
T 1gd9_A 297 RRKLVWKRLNEM-GLPTVK--PKGAFYIFPRIRDTGL----------TSKKFSELMLKEARVAVVPGSAFGKAGEGYVRI 363 (389)
T ss_dssp HHHHHHHHHHHT-TCCCCC--CCBTTEECCBCGGGTC----------CHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEE
T ss_pred HHHHHHHHHHHc-CCeecC--CCeeeEEEEeccCCCC----------CHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEE
Confidence 888888888876 333321 1224455556542110 1456778887 899999874 357999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 479 SPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 479 ~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
+++ .++++|++++++|++++++
T Consensus 364 ~~~--~~~~~i~~~l~~l~~~~~~ 385 (389)
T 1gd9_A 364 SYA--TAYEKLEEAMDRMERVLKE 385 (389)
T ss_dssp ECC--SCHHHHHHHHHHHHHHHHH
T ss_pred Eec--CCHHHHHHHHHHHHHHHHh
Confidence 965 4999999999999998864
No 72
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.95 E-value=1.3e-26 Score=241.15 Aligned_cols=349 Identities=14% Similarity=0.087 Sum_probs=236.8
Q ss_pred EEeCCCCEEEEccCCcccc-cCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc----CCCCeEEEe
Q 010250 94 VYDVNGKKYLDSLAGLWCT-ALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA----SKMAKVFFT 168 (514)
Q Consensus 94 ~~d~dG~~ylD~~s~~~~~-~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~----~~~~~v~~~ 168 (514)
..+.+|+.+|||..|.... +-.+.+|.|++|+.+++++.... . ..+.....++.+.+++++.. ...++++++
T Consensus 48 ~~~~~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~-~--y~~~~g~~~lr~~la~~~~~~~~~~~~~~v~~t 124 (427)
T 3dyd_A 48 VKPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYN-G--YAPSIGFLSSREEIASYYHCPEAPLEAKDVILT 124 (427)
T ss_dssp CCCCTTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSS-S--CCCTTCCHHHHHHHHHHHCBTTBCCCGGGEEEE
T ss_pred hcccCCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCC-C--CCCCCCcHHHHHHHHHHHhhcCCCCChHHEEEe
Confidence 3445689999999886321 12347899999999998763211 0 11233456788888888742 246799999
Q ss_pred CChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCC
Q 010250 169 NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPG 246 (514)
Q Consensus 169 ~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 246 (514)
+||++|++.+++.+. .++++|++.+++|++........+.... .++.. ..|.
T Consensus 125 ~g~t~al~~~~~~l~--------~~gd~vl~~~p~~~~~~~~~~~~g~~~~-------------~~~~~~~~~~~----- 178 (427)
T 3dyd_A 125 SGCSQAIDLCLAVLA--------NPGQNILVPRPGFSLYKTLAESMGIEVK-------------LYNLLPEKSWE----- 178 (427)
T ss_dssp SSHHHHHHHHHHHHC--------CTTCEEEEEESCCTHHHHHHHHTTCEEE-------------EEEEEGGGTTE-----
T ss_pred cCcHHHHHHHHHHhc--------CCCCEEEEcCCCchhHHHHHHHcCCEEE-------------EEecccccCCC-----
Confidence 999999999999874 3457899999999987644333222111 00100 0000
Q ss_pred CChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-e
Q 010250 247 ETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-G 325 (514)
Q Consensus 247 ~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~ 325 (514)
.+++++++.+. + ++.+|++...++++|.+. +++.+++|.++|++||+++|+||+|++|++.|..+ .
T Consensus 179 --------~d~~~l~~~l~---~-~~~~v~i~~p~nptG~~~-~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~ 245 (427)
T 3dyd_A 179 --------IDLKQLEYLID---E-KTACLIVNNPSNPCGSVF-SKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEP 245 (427)
T ss_dssp --------ECHHHHHSSCC---T-TEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCC
T ss_pred --------CCHHHHHHHhc---c-CCCEEEEECCCCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCcc
Confidence 01456665553 2 345555555577888754 67889999999999999999999999998888643 4
Q ss_pred ecccCCCCchh---chhhhhcCCcccceeEEeC-------HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH
Q 010250 326 CDKYSIKPDLV---SFAKALSSAYMPIGAILVS-------PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY 395 (514)
Q Consensus 326 ~~~~gv~pDiv---~~sK~l~gG~~pig~v~~~-------~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~ 395 (514)
...++..++++ ++||.++.+++|+|+++++ +++++.+.. ....+++.++++++++.++|+..
T Consensus 246 ~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~--------~~~~~~~~~~~~~~a~~~~L~~~ 317 (427)
T 3dyd_A 246 LATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVK--------LSQRILGPCTIVQGALKSILCRT 317 (427)
T ss_dssp GGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHH--------HHHHHCCSCHHHHHHHHHHHHHS
T ss_pred HHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHHHHH--------HHhccCCCCHHHHHHHHHHHHhc
Confidence 45555566666 7899876544899999987 467777653 12236788999999999998842
Q ss_pred hh---ccHHHHHHHHHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEE
Q 010250 396 KE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVR 470 (514)
Q Consensus 396 ~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~ 470 (514)
.+ ++..++++++.+++.+.|+++ +.+..+.+. |.++.+.+.....+. .. ....+...|+ ++||++.
T Consensus 318 ~~~~~~~~~~~~~~~~~~l~~~L~~~---~g~~~~~p~~g~~~~~~l~~~~~~~-----~~-~~~~~~~~l~~~~gV~v~ 388 (427)
T 3dyd_A 318 PGEFYHNTLSFLKSNADLCYGALAAI---PGLRPVRPSGAMYLMVGIEMEHFPE-----FE-NDVEFTERLVAEQSVHCL 388 (427)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHS---TTEEEECCSBTTEEEEEECGGGCTT-----CS-SHHHHHHHHHHHHCEECE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcC---CCceecCCCeeEEEEEecCHhhcCC-----CC-CHHHHHHHHHHHCCEEEE
Confidence 22 345677788888888888765 434434333 556666765321110 00 1345667775 8999998
Q ss_pred ee-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 471 VS-----GDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 471 ~~-----g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
++ .+.+|++ +.+++++|++++++|.++++++
T Consensus 389 ~g~~~~~~~~iRis--~~~~~e~i~~~l~~l~~~l~~~ 424 (427)
T 3dyd_A 389 PATCFEYPNFIRVV--ITVPEVMMLEACSRIQEFCEQH 424 (427)
T ss_dssp EGGGGTCTTEEEEE--SCSCHHHHHHHHHHHHHHHHHH
T ss_pred CCcccCCCCeEEEE--ECCCHHHHHHHHHHHHHHHHHh
Confidence 75 3679999 5689999999999999998764
No 73
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.95 E-value=7.3e-27 Score=236.24 Aligned_cols=337 Identities=14% Similarity=0.098 Sum_probs=234.2
Q ss_pred eeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEe
Q 010250 89 SEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFT 168 (514)
Q Consensus 89 ~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~ 168 (514)
.+|.++++.+|+++|||.+|. ++++ .+|+|++++.++++....+ +.....++.+.++++++ .+.++++++
T Consensus 5 ~~~~~~~~~~~~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~y------~~~~~~~l~~~la~~~~-~~~~~i~~~ 74 (354)
T 3ly1_A 5 PESAAFTAPSTDNPIRINFNE--NPLG-MSPKAQAAARDAVVKANRY------AKNEILMLGNKLAAHHQ-VEAPSILLT 74 (354)
T ss_dssp ----CCCCCCSSSCEECSSCC--CSSC-CCHHHHHHHHHTGGGTTSC------CHHHHHHHHHHHHHHTT-SCGGGEEEE
T ss_pred cccccccCCCCCceEEccCCC--CCCC-CCHHHHHHHHHHHhhCcCC------CCCchHHHHHHHHHHhC-CChHHEEEe
Confidence 456778889999999999875 5565 7899999999988763322 33456789999999984 346799999
Q ss_pred CChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCC
Q 010250 169 NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET 248 (514)
Q Consensus 169 ~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (514)
+||++|++.+++.+. ..+++|++.+++|++........+. .. ..++....+.
T Consensus 75 ~g~~~a~~~~~~~l~--------~~gd~vl~~~~~~~~~~~~~~~~g~-~~------------~~~~~~~~~~------- 126 (354)
T 3ly1_A 75 AGSSEGIRAAIEAYA--------SLEAQLVIPELTYGDGEHFAKIAGM-KV------------TKVKMLDNWA------- 126 (354)
T ss_dssp SHHHHHHHHHHHHHC--------CTTCEEEEESSSCTHHHHHHHHTTC-EE------------EEECCCTTSC-------
T ss_pred CChHHHHHHHHHHHh--------CCCCeEEECCCCchHHHHHHHHcCC-EE------------EEecCCCCCC-------
Confidence 999999999998763 2346899999999987543332221 11 1111111111
Q ss_pred hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-e-
Q 010250 249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-C- 326 (514)
Q Consensus 249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~- 326 (514)
.++++|++.+.+. +++++|+++..++++|.+.+ .+.+++|.++| +||+++|+||+|+++++.|.... .
T Consensus 127 ------~d~~~l~~~l~~~--~~~~~v~l~~p~nptG~~~~-~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~ 196 (354)
T 3ly1_A 127 ------FDIEGLKAAVAAY--SGPSIVYLVNPNNPTGTITP-ADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFRSISP 196 (354)
T ss_dssp ------CCHHHHHHHHHTC--SSCEEEEEESSCTTTCCCCC-HHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHH
T ss_pred ------CCHHHHHHHhccC--CCCCEEEEeCCCCCcCCCcC-HHHHHHHHHhC-CCCeEEEEeccHHHhccccccCCHHH
Confidence 0157788877631 24566666666777887764 45566677777 69999999999998877664221 1
Q ss_pred --ccc-CCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHH
Q 010250 327 --DKY-SIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVE 402 (514)
Q Consensus 327 --~~~-gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~ 402 (514)
..+ +....+.+++|.++.+++++|++++++++++.+... ...++.|+++++++.++|+..+ -++..+
T Consensus 197 ~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 267 (354)
T 3ly1_A 197 MITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRY---------VAGEKINFSGVDAALASMNDSAFITYSKK 267 (354)
T ss_dssp HHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHHHHGGG---------TTCSCCCHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HhhhcCCCEEEEeeChhhccChhhhheeeecCHHHHHHHHHh---------cCCCCCCHHHHHHHHHHhcCHHHHHHHHH
Confidence 112 222334478999973338999999999999988742 1236788999999988887432 134567
Q ss_pred HHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE----eeCCEEEE
Q 010250 403 QVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----VSGDNIMM 478 (514)
Q Consensus 403 ~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~g~~iRi 478 (514)
+++++.+++.+.|+++ .... .++.|.++++.+.. . ...+.+.|.++||++. ...+.+|+
T Consensus 268 ~~~~~~~~l~~~l~~~-~~~~---~~~~~~~~~~~~~~-~------------~~~~~~~l~~~gi~v~g~~~~~~~~iRi 330 (354)
T 3ly1_A 268 SNDVSRQILLKALEDL-KLPY---LPSEGNFVFHQLVV-P------------LKDYQTHMADAGVLIGRAFPPADNWCRI 330 (354)
T ss_dssp HHHHHHHHHHHHHHHH-TCCB---CCCCSSEEEEECSS-C------------HHHHHHHHHHTTEECCCCCTTCTTEEEE
T ss_pred HHHHHHHHHHHHHHHC-CCeE---CCCCceEEEEECCC-C------------HHHHHHHHHHCCEEEeecCCCCCCEEEE
Confidence 7888888888888876 3222 24567777777753 1 4568888999999987 12357999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 479 SPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 479 ~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
+. .+++|+++++++|++++++
T Consensus 331 s~---~~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 331 SL---GTPQEMQWVADTMREFRKK 351 (354)
T ss_dssp EC---CCHHHHHHHHHHHHHHHHT
T ss_pred Ec---CCHHHHHHHHHHHHHHHHh
Confidence 93 3899999999999988753
No 74
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.95 E-value=6.8e-27 Score=241.65 Aligned_cols=334 Identities=13% Similarity=0.104 Sum_probs=225.9
Q ss_pred CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-----cCCCCeEEEeCCh
Q 010250 97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-----ASKMAKVFFTNSG 171 (514)
Q Consensus 97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-----~~~~~~v~~~~sG 171 (514)
.+|++++||.++.. .++ .+|++.+++ +++++....+. ......++.+.+++++. +.+.+++++++||
T Consensus 40 ~~g~~~i~l~~~~~--~~~-~~~~v~~a~-~~l~~~~~~y~----~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~ 111 (409)
T 2gb3_A 40 KRGVRIHHLNIGQP--DLK-TPEVFFERI-YENKPEVVYYS----HSAGIWELREAFASYYKRRQRVDVKPENVLVTNGG 111 (409)
T ss_dssp HTTCEEEECSSCCC--CSC-CCTHHHHHH-HHTCCSSCCCC----CTTCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHH
T ss_pred hcCCCEEeccCCCC--CCC-CCHHHHHHH-HHHhcCCCCCC----CCCCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCH
Confidence 36889999988754 456 578999999 88865321111 11123455555555542 1345789999999
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC--cccCCCCCCCh
Q 010250 172 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH--YWRYAHPGETE 249 (514)
Q Consensus 172 seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 249 (514)
++|++.+++.+. .++++|++.+++||+....... .|.... .++... .|..
T Consensus 112 t~a~~~~~~~~~--------~~gd~Vl~~~~~~~~~~~~~~~-~g~~~~------------~v~~~~~~~~~~------- 163 (409)
T 2gb3_A 112 SEAILFSFAVIA--------NPGDEILVLEPFYANYNAFAKI-AGVKLI------------PVTRRMEEGFAI------- 163 (409)
T ss_dssp HHHHHHHHHHHC--------CTTCEEEEEESCCTHHHHHHHH-HTCEEE------------EEECCGGGTSCC-------
T ss_pred HHHHHHHHHHhC--------CCCCEEEEcCCCchhHHHHHHH-cCCEEE------------EeccCCCCCCcc-------
Confidence 999999998773 3357899999999987543222 221111 011100 0000
Q ss_pred hHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceeccc
Q 010250 250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKY 329 (514)
Q Consensus 250 ~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~ 329 (514)
+++|++.+. +++++|+++++++.+|.+. +++++++|.++|++||+++|+||+|+++++.|..... ..
T Consensus 164 -------~~~l~~~l~----~~~~~v~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~-~~ 230 (409)
T 2gb3_A 164 -------PQNLESFIN----ERTKGIVLSNPCNPTGVVY-GKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASA-LS 230 (409)
T ss_dssp -------CTTGGGGCC----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCG-GG
T ss_pred -------HHHHHHhhC----cCCeEEEECCCCCCCCCCc-CHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCc-cc
Confidence 134544443 3577788887788888765 5689999999999999999999999988776643332 22
Q ss_pred CC-CCchh--chhhhhcCCcccceeEEeCH-HHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--hccHHHH
Q 010250 330 SI-KPDLV--SFAKALSSAYMPIGAILVSP-EVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQ 403 (514)
Q Consensus 330 gv-~pDiv--~~sK~l~gG~~pig~v~~~~-~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~~~~~~~ 403 (514)
++ ..|++ +++|.++.+++++|++++++ ++++.+... ...++ +.++++++++.++|+... -+++.++
T Consensus 231 ~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~~-------~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~ 302 (409)
T 2gb3_A 231 IESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKL-------AQGRL-APPLLEQIGSVGLLNLDDSFFDFVRET 302 (409)
T ss_dssp SCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHHH-------HHHSC-CCCHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred cCCCCEEEEecchhccCCccceEEEEEECcHHHHHHHHHH-------HhccC-CCCHHHHHHHHHHHhccHHHHHHHHHH
Confidence 33 34665 68999973338999999998 898887631 23344 778999998888885321 1345777
Q ss_pred HHHHHHHHHhhhhhccCCCc-eeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC------CcEEEee----
Q 010250 404 VNKIAPKFQDGVKAFSDSPI-IGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH------GMLVRVS---- 472 (514)
Q Consensus 404 ~~~~~~~l~~~L~~l~~~~~-~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------Gv~~~~~---- 472 (514)
++++.+++.+.|+++ ...+ .. ...|.+..+.+.. . ....+.+.|+++ ||++.++
T Consensus 303 ~~~~~~~l~~~L~~~-g~~~~~~--~~~~~~~~~~~~~-~-----------~~~~l~~~l~~~~~~~~~gi~v~~g~~f~ 367 (409)
T 2gb3_A 303 YRERVETVLKKLEEH-GLKRFTK--PSGAFYITAELPV-E-----------DAEEFARWMLTDFNMDGETTMVAPLRGFY 367 (409)
T ss_dssp HHHHHHHHHHHHHHT-TCCCBCC--CSBSSEEEEECSS-S-----------CHHHHHHHHHHSCCBTTEEEECEEGGGGC
T ss_pred HHHHHHHHHHHHHHc-CceeeeC--CCeeEEEEEEeCC-C-----------CHHHHHHHHHhccccccCcEEEeCchHhC
Confidence 888888898888876 3333 21 2235566666641 1 145678888887 9999864
Q ss_pred ------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 473 ------GDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 473 ------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
.+.+|++++ +++++|++++++|+++++++.
T Consensus 368 ~~~~~~~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~ 403 (409)
T 2gb3_A 368 LTPGLGKKEIRIACV--LEKDLLSRAIDVLMEGLKMFC 403 (409)
T ss_dssp SSTTTTSSEEEEECC--SCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHHHhh
Confidence 357999976 899999999999999997764
No 75
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.95 E-value=7.8e-27 Score=238.66 Aligned_cols=328 Identities=16% Similarity=0.114 Sum_probs=226.9
Q ss_pred EEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHH
Q 010250 102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKL 181 (514)
Q Consensus 102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~ 181 (514)
+|||.+|.. .++ .+|.+.+++.+++++...| . ......++.+.|+++++ .+.+++++++||++|++.+++.
T Consensus 27 ~i~l~~~~~--~~~-~~~~v~~a~~~~~~~~~~y----~-~~~~~~~l~~~la~~~~-~~~~~v~~~~g~~~a~~~~~~~ 97 (381)
T 1v2d_A 27 AVNLGQGFP--SNP-PPPFLLEAVRRALGRQDQY----A-PPAGLPALREALAEEFA-VEPESVVVTSGATEALYVLLQS 97 (381)
T ss_dssp CEECCCCSC--SSC-CCHHHHHHHHHHTTTSCSC----C-CTTCCHHHHHHHHHHHT-SCGGGEEEESSHHHHHHHHHHH
T ss_pred eEEecCCCC--CCC-CCHHHHHHHHHHHHHhcCC----C-CCCCCHHHHHHHHHhcC-CChhhEEEcCChHHHHHHHHHH
Confidence 789988753 466 6899999999998762211 1 12235788999999874 3456899999999999999988
Q ss_pred HHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC---CcccCCCCCCChhHHHHHHHH
Q 010250 182 VWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP---HYWRYAHPGETEEEYSTRLAN 258 (514)
Q Consensus 182 a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 258 (514)
+. .++++|++.+++||+..... ...|... ..++.+ ..|. .+++
T Consensus 98 ~~--------~~gd~Vl~~~~~~~~~~~~~-~~~g~~~------------~~v~~~~~~~~~~-------------~d~~ 143 (381)
T 1v2d_A 98 LV--------GPGDEVVVLEPFFDVYLPDA-FLAGAKA------------RLVRLDLTPEGFR-------------LDLS 143 (381)
T ss_dssp HC--------CTTCEEEEEESCCTTHHHHH-HHTTCEE------------EEEECEEETTEEE-------------CCHH
T ss_pred hC--------CCCCEEEEcCCCchhHHHHH-HHcCCEE------------EEEeCCCCCccCC-------------cCHH
Confidence 73 34578999999999975322 2222111 111111 1111 1145
Q ss_pred HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-ceec--ccCCCCch
Q 010250 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGCD--KYSIKPDL 335 (514)
Q Consensus 259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~~--~~gv~pDi 335 (514)
+|++.+. +++++|+++.+++.+|.+. +.+++++|.++|++||+++|+||+|+++.. |.. .... .++..+++
T Consensus 144 ~l~~~l~----~~~~~v~~~~~~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~~~~~~~~~ 217 (381)
T 1v2d_A 144 ALEKALT----PRTRALLLNTPMNPTGLVF-GERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREFAPERTFTV 217 (381)
T ss_dssp HHHTTCC----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHHCTTTEEEE
T ss_pred HHHHhcC----cCCEEEEECCCCCCCCCcc-CHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHhcCCCEEEE
Confidence 6665553 3578888888888888765 568999999999999999999999998744 431 1111 34555666
Q ss_pred hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--h--ccHHHHHHHHHHHH
Q 010250 336 VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--E--RNIVEQVNKIAPKF 411 (514)
Q Consensus 336 v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~--~~~~~~~~~~~~~l 411 (514)
.+++|.++.+++++|++++++++++.+... .+..+++.++++++++.++|+... + +++.++++++++++
T Consensus 218 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l 290 (381)
T 1v2d_A 218 GSAGKRLEATGYRVGWIVGPKEFMPRLAGM-------RQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLL 290 (381)
T ss_dssp EEHHHHTTCGGGCCEEEECCTTTHHHHHHH-------HHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred eechhhcCCcccceEEEEeCHHHHHHHHHH-------HhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHH
Confidence 789999873338999999999998887631 233467788999999999998652 2 34677888888999
Q ss_pred HhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---------CCEEEEeCCC
Q 010250 412 QDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---------GDNIMMSPPF 482 (514)
Q Consensus 412 ~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------g~~iRi~p~~ 482 (514)
.+.|+++ ...+.. ...|.++++.+.+. . +...+.++||++.++ .+.+||+++.
T Consensus 291 ~~~L~~~-g~~~~~--~~~~~~~~~~~~~~-----------~----~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~ 352 (381)
T 1v2d_A 291 AGGLRAM-GLRVYV--PEGTYFLMAELPGW-----------D----AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK 352 (381)
T ss_dssp HHHHHHT-TCCEEC--CSBSSEEEEECTTC-----------C----HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS
T ss_pred HHHHHHC-CCEecC--CCcceEEEEecChH-----------h----HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC
Confidence 9988874 322221 11255666766421 0 446778999999864 3579999765
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHH
Q 010250 483 IMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 483 ~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
++++|++++++|++++++.++
T Consensus 353 --~~~~i~~~~~~l~~~l~~~r~ 373 (381)
T 1v2d_A 353 --TEEELHLALERLGRVVNSPRE 373 (381)
T ss_dssp --CHHHHHHHHHHHHHHC-----
T ss_pred --CHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999877654
No 76
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.95 E-value=1.1e-26 Score=238.63 Aligned_cols=332 Identities=14% Similarity=0.109 Sum_probs=226.0
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc----Cc-CCCCeEEEeCChh
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----TA-SKMAKVFFTNSGS 172 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~----~~-~~~~~v~~~~sGs 172 (514)
.|+.++||.++.. .+|+ +|.+.+++.+++++....+. ......++.+.+++++ +. ...+++++++||+
T Consensus 39 ~g~~~i~l~~~~~--~~~~-~~~v~~a~~~~~~~~~~~y~----~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t 111 (389)
T 1o4s_A 39 KGEDVINLTAGEP--DFPT-PEPVVEEAVRFLQKGEVKYT----DPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAK 111 (389)
T ss_dssp TTCCCEECCCSSC--SSCC-CHHHHHHHHHHHTTCCCCCC----CTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHH
T ss_pred cCCCEEEccCCCC--CCCC-CHHHHHHHHHHHhcCCCCCC----CCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHH
Confidence 5788999988753 5675 89999999999876322111 1112345555555544 21 2457899999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC--cccCCCCCCChh
Q 010250 173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH--YWRYAHPGETEE 250 (514)
Q Consensus 173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 250 (514)
+|++.+++.+. .++++|++.+++|++....... .|... ..++... .|.
T Consensus 112 ~al~~~~~~l~--------~~gd~Vl~~~~~~~~~~~~~~~-~g~~~------------~~v~~~~~~~~~--------- 161 (389)
T 1o4s_A 112 QALFNAFMALL--------DPGDEVIVFSPVWVSYIPQIIL-AGGTV------------NVVETFMSKNFQ--------- 161 (389)
T ss_dssp HHHHHHHHHHC--------CTTCEEEEEESCCTTHHHHHHH-TTCEE------------EEEECCGGGTTC---------
T ss_pred HHHHHHHHHhC--------CCCCEEEEcCCCchhHHHHHHH-cCCEE------------EEEecCCccCCC---------
Confidence 99999998763 2346899999999987543322 22111 1111110 010
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccC
Q 010250 251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS 330 (514)
Q Consensus 251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~g 330 (514)
.++++|++.+. +++++|+++..++.+|.+. +++++++|.++|++||+++|+||+|+++.+.|.......+.
T Consensus 162 ----~d~~~l~~~l~----~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~ 232 (389)
T 1o4s_A 162 ----PSLEEVEGLLV----GKTKAVLINSPNNPTGVVY-RREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVS 232 (389)
T ss_dssp ----CCHHHHHHTCC----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHC
T ss_pred ----CCHHHHHHhcc----cCceEEEEcCCCCCCCCCC-CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcC
Confidence 01466766653 3567777777788888764 57899999999999999999999999886665322222221
Q ss_pred --CCCch--hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHH
Q 010250 331 --IKPDL--VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNK 406 (514)
Q Consensus 331 --v~pDi--v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~ 406 (514)
-..|+ .+++|.++.+++++|++++++++++.+.. ....++++.+++++.++.++|+.. .+++.+++++
T Consensus 233 ~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~~~~~l~~-------~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~ 304 (389)
T 1o4s_A 233 EGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSK-------IQSHTTSCINTVAQYAALKALEVD-NSYMVQTFKE 304 (389)
T ss_dssp SSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHH-------HHHHHTCSCCHHHHHHHHHHTTCC-CHHHHHHHHH
T ss_pred CCCCcEEEEeechhhcCCcccceEEEEeCHHHHHHHHH-------HhhhcccCCCHHHHHHHHHHHhcc-HHHHHHHHHH
Confidence 12343 47899997333899999999999888863 234457778899888888877632 3456788889
Q ss_pred HHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-----CCEEEEeC
Q 010250 407 IAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-----GDNIMMSP 480 (514)
Q Consensus 407 ~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-----g~~iRi~p 480 (514)
+++++.+.|+++ ...... ...|.++.+.+. . ....+.+.|+ ++||.+.++ ++.+|+++
T Consensus 305 ~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~-~------------~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~ 368 (389)
T 1o4s_A 305 RKNFVVERLKKM-GVKFVE--PEGAFYLFFKVR-G------------DDVKFCERLLEEKKVALVPGSAFLKPGFVRLSF 368 (389)
T ss_dssp HHHHHHHHHHHT-TCCCCC--CSBSSEEEEECS-S------------CHHHHHHHHHHHHCEECEEGGGGTCTTEEEEEC
T ss_pred HHHHHHHHHHhc-CCeeec--CCcceEEEEeCC-C------------CHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEE
Confidence 999999999876 333321 112555666664 1 1345778887 889999875 25899997
Q ss_pred CCCCCHHHHHHHHHHHHHHHH
Q 010250 481 PFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 481 ~~~~t~e~id~~~~~l~~~l~ 501 (514)
+ .++++|++++++|.++++
T Consensus 369 ~--~~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 369 A--TSIERLTEALDRIEDFLN 387 (389)
T ss_dssp C--SCHHHHHHHHHHHHHHHT
T ss_pred e--CCHHHHHHHHHHHHHHHh
Confidence 6 499999999999998764
No 77
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.95 E-value=2.3e-27 Score=242.02 Aligned_cols=333 Identities=11% Similarity=0.006 Sum_probs=222.1
Q ss_pred CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-CCCCeEEEeCChhHHH
Q 010250 97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKMAKVFFTNSGSEAN 175 (514)
Q Consensus 97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~~v~~~~sGseA~ 175 (514)
.+| ++|||.+|. ..++ .+|.|.+|+.+++.....|.. ..+..+...++++.+.+.++. .+.+++++++||++|+
T Consensus 21 ~~g-~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~y~~-~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al 95 (376)
T 3ezs_A 21 PKK-RGLDLGIGE--PQFE-TPKFIQDALKNHTHSLNIYPK-SAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVL 95 (376)
T ss_dssp CSS-CCCBCSSCC--CCSC-CCHHHHHHHHTTGGGGGSCCC-TTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHH
T ss_pred ccC-CEEEeCCCC--CCCC-CCHHHHHHHHHhhhhcCCCCC-CCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHH
Confidence 467 899998886 4566 689999999988744322211 112334555566666555442 2568999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250 176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255 (514)
Q Consensus 176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (514)
+.+++.+. .+.++++|++.+++||+........+.... .++........
T Consensus 96 ~~~~~~~~------~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~-------------~~~~~~~~~~~------------ 144 (376)
T 3ezs_A 96 FNFPSFVL------FDYQNPTIAYPNPFYQIYEGAAKFIKAKSL-------------LMPLTKENDFT------------ 144 (376)
T ss_dssp HHHHHHHT------TTCSSCEEEEEESCCTHHHHHHHHTTCEEE-------------EEECCGGGTSC------------
T ss_pred HHHHHHHc------CCCCCCEEEEecCCcHhHHHHHHHcCCEEE-------------EcccCCCCCcc------------
Confidence 99998874 111157899999999987544332221111 01111000000
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceec--------
Q 010250 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCD-------- 327 (514)
Q Consensus 256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~-------- 327 (514)
. ++++.+.. ++.+|++...++++|.+. +.+.+++|.++|++||+++|+||+|++|.+.|......
T Consensus 145 -~-~l~~~~~~----~~~~v~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 217 (376)
T 3ezs_A 145 -P-SLNEKELQ----EVDLVILNSPNNPTGRTL-SLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGN 217 (376)
T ss_dssp -C-CCCHHHHH----HCSEEEECSSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTC
T ss_pred -h-hHHhhhcc----CCCEEEEcCCCCCcCCCC-CHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccc
Confidence 0 23333332 234555544477778665 56789999999999999999999999987777443321
Q ss_pred -ccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHH
Q 010250 328 -KYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVN 405 (514)
Q Consensus 328 -~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~ 405 (514)
.++....+.++||.++.+++++|++++++++++.+.. ..+..+++.++++++++.++|+..+. ++..++++
T Consensus 218 ~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 290 (376)
T 3ezs_A 218 EAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLEKYKA-------FRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYA 290 (376)
T ss_dssp TTCTTEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHH-------HHTTTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHH
T ss_pred cccCcEEEEecchhccCCccceeEEEeeCHHHHHHHHH-------HHhhhcCCCChHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 2344345568999996333899999999999998874 23445778899999999988874211 23455666
Q ss_pred HHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee---------CCE
Q 010250 406 KIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS---------GDN 475 (514)
Q Consensus 406 ~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~---------g~~ 475 (514)
++.+++.+.|+ .+. .+..|.++++.+.+ ...+.+.|.+ +||++.++ .+.
T Consensus 291 ~~~~~l~~~l~-----~~~--~~~~~~~~~~~~~~--------------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~ 349 (376)
T 3ezs_A 291 NNLKLARKIFK-----NTL--IYPYSFYVYLPVQN--------------GENFAKTLYQNEGIITLPALYLGRNRIGADY 349 (376)
T ss_dssp HHHHHHHHHST-----TCC--CCSBSSEEEEECSC--------------HHHHHHHHHHHHCCBCEEGGGGCSTTTTTTE
T ss_pred HHHHHHHHHhc-----CCC--CCCcceEEEEECCC--------------HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCe
Confidence 66666666665 111 33557777777751 3457788887 89999863 357
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 476 IMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 476 iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
+||+++ .|+++|++++++|++++++
T Consensus 350 iRis~~--~~~~~i~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 350 VRLALV--YDTPLLEKPLEIIETYREN 374 (376)
T ss_dssp EEEECC--SCHHHHHHHHHHHHHHHCC
T ss_pred EEEEEc--CCHHHHHHHHHHHHHHHHh
Confidence 999965 4999999999999998754
No 78
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.95 E-value=8.4e-27 Score=240.65 Aligned_cols=345 Identities=12% Similarity=0.066 Sum_probs=227.5
Q ss_pred CCCCEEEEccCCcccc-cCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHH
Q 010250 97 VNGKKYLDSLAGLWCT-ALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEA 174 (514)
Q Consensus 97 ~dG~~ylD~~s~~~~~-~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA 174 (514)
.+|+.++||.++..+. .++ .+|++.+++.+++++....+....+..+....+++.+.+.++ +.+.+++++++||++|
T Consensus 35 ~~g~~~i~l~~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a 113 (406)
T 1xi9_A 35 KKGIKVIRLNIGDPVKFDFQ-PPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEA 113 (406)
T ss_dssp HTTCCCEECCCCCGGGTTCC-CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHH
T ss_pred HcCCCEEEecCCCCCcCCCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHH
Confidence 3688899998886532 566 579999999999876431111111122333444444443322 2345789999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCChhHH
Q 010250 175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEY 252 (514)
Q Consensus 175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 252 (514)
++.+++.+. .++++|++.+++||+....... .|... ..++.. ..|.
T Consensus 114 l~~~~~~l~--------~~gd~Vl~~~~~~~~~~~~~~~-~g~~~------------~~v~~~~~~~~~----------- 161 (406)
T 1xi9_A 114 LQLIFGALL--------DPGDEILVPGPSYPPYTGLVKF-YGGKP------------VEYRTIEEEDWQ----------- 161 (406)
T ss_dssp HHHHHHHHC--------CTTCEEEEEESCCHHHHHHHHH-TTCEE------------EEEEEEGGGTSE-----------
T ss_pred HHHHHHHhC--------CCCCEEEEcCCCCccHHHHHHH-cCCEE------------EEeecCCCcCCc-----------
Confidence 999998773 2357899999999987543322 22111 011110 0010
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCC
Q 010250 253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK 332 (514)
Q Consensus 253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~ 332 (514)
.++++|++.+. +++++|+++++++.+|.+. +++++++|.++|++||+++|+||+|+++.+.+.......++-.
T Consensus 162 --~d~~~l~~~l~----~~~~~v~i~~p~nptG~~~-~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 234 (406)
T 1xi9_A 162 --PDIDDIRKKIT----DRTKAIAVINPNNPTGALY-DKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKD 234 (406)
T ss_dssp --ECHHHHHHHCC----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSS
T ss_pred --CCHHHHHHhhC----cCceEEEEECCCCCCCCCc-CHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCC
Confidence 11467777664 3577777877788888764 6689999999999999999999999988664333333333311
Q ss_pred C-chh--chhhhhcCCcccceeEE--eCH----HHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHH
Q 010250 333 P-DLV--SFAKALSSAYMPIGAIL--VSP----EVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIV 401 (514)
Q Consensus 333 p-Div--~~sK~l~gG~~pig~v~--~~~----~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~ 401 (514)
. |++ +++|.++.+++++|+++ +++ ++++.+... .... ++.++++++++.++|+...+ +++.
T Consensus 235 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l~~~l~~~-------~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~ 306 (406)
T 1xi9_A 235 VPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRL-------ARIR-LCPNTPAQFAAIAGLTGPMDYLKEYM 306 (406)
T ss_dssp SCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHHHHHHHH-------HHHT-CCSCSHHHHHHHHHHHSCCHHHHHHH
T ss_pred ceEEEEeccccccCCCccEEEEEEEecCchhHHHHHHHHHHH-------HHhh-cCCCHHHHHHHHHHHhCCcHHHHHHH
Confidence 1 344 57899974338999999 888 898888641 1112 66788899988888863222 3456
Q ss_pred HHHHHHHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------
Q 010250 402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS------- 472 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~------- 472 (514)
++++++++++.+.|+++ +.+..+.+. |.+..+.+..... . ....+.+.|+ ++||++.++
T Consensus 307 ~~~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~l~~~l~~~~gi~v~~g~~f~~~~ 374 (406)
T 1xi9_A 307 KKLKERRDYIYKRLNEI---PGISTTKPQGAFYIFPKIEVGPW-K--------NDKEFVLDVLHNAHVLFVHGSGFGEYG 374 (406)
T ss_dssp HHHHHHHHHHHHHHHTS---TTEECCCCCBSSEECCEECSCSC-S--------SHHHHHHHHHHHHCEECEEGGGGCGGG
T ss_pred HHHHHHHHHHHHHHHhC---CCCeeecCCeeEEEEEecCccCC-C--------CHHHHHHHHHHhCCEEEeCchhcCCCC
Confidence 77888888888888765 222222233 4445556642100 0 1455777887 899999875
Q ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 473 GDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 473 g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
.+.+||+++ +++++|++++++|+++++++
T Consensus 375 ~~~lRis~~--~~~~~i~~~~~~l~~~l~~~ 403 (406)
T 1xi9_A 375 AGHFRAVFL--PPIEILEEAMDRFEKFMKER 403 (406)
T ss_dssp TTBEEEECC--SCHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEec--CCHHHHHHHHHHHHHHHHHH
Confidence 357999976 89999999999999998765
No 79
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.95 E-value=6.3e-27 Score=241.62 Aligned_cols=336 Identities=10% Similarity=0.066 Sum_probs=224.4
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc----Cc-CCC-CeEEEeCCh
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----TA-SKM-AKVFFTNSG 171 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~----~~-~~~-~~v~~~~sG 171 (514)
.|+++|||.+|.. .+| .+|.|.+++.+++++... . .+. ......++.+.+++++ +. .+. +++++++||
T Consensus 45 ~g~~~idl~~g~~--~~~-~~~~v~~a~~~~~~~~~~-~-~y~-~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~ 118 (404)
T 2o1b_A 45 GPLPLINMAVGIP--DGP-TPQGIIDHFQKALTIPEN-Q-KYG-AFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGT 118 (404)
T ss_dssp CSSCCEECCCCSC--SSC-CCHHHHHHHHHHTTCHHH-H-SCC-CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSH
T ss_pred CCCCEEecCCcCC--CCC-CCHHHHHHHHHHHhCCCC-C-CCC-CCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCc
Confidence 5788999988864 577 689999999998864210 0 011 1122345555555554 42 122 689999999
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChh
Q 010250 172 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEE 250 (514)
Q Consensus 172 seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 250 (514)
++|++.+++.+. .++++|++.+++||+........ |.... .++.. +.|..
T Consensus 119 ~~al~~~~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~------------~v~~~~~~~~~-------- 169 (404)
T 2o1b_A 119 KNGLVAVPTCVI--------NPGDYVLLPDPGYTDYLAGVLLA-DGKPV------------PLNLEPPHYLP-------- 169 (404)
T ss_dssp HHHHHHHHHHHC--------CTTCEEEEEESCCSSHHHHHHHT-TCEEE------------EEECCTTTCCC--------
T ss_pred HHHHHHHHHHhc--------CCCCEEEEcCCCchhHHHHHHHC-CCEEE------------EeccCcccCcC--------
Confidence 999999998763 23478999999999976443322 21111 11110 01110
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccccee-cc-
Q 010250 251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC-DK- 328 (514)
Q Consensus 251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~-~~- 328 (514)
++++|++.+. +++++|+++..++++|.+. +.+++++|.++|++||+++|+||+|++|.+.|..... ..
T Consensus 170 -----d~~~l~~~l~----~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~ 239 (404)
T 2o1b_A 170 -----DWSKVDSQII----DKTKLIYLTYPNNPTGSTA-TKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASE 239 (404)
T ss_dssp -----CGGGSCHHHH----HHEEEEEECSSCTTTCCCC-CHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGST
T ss_pred -----CHHHHHHhhc----cCceEEEEcCCCCCCCccC-CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcC
Confidence 1355666664 2467777776677778764 6789999999999999999999999988665532111 11
Q ss_pred --cCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHH
Q 010250 329 --YSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQV 404 (514)
Q Consensus 329 --~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~ 404 (514)
++....+.+++|.++.+++++|++++++++++.+.. .....+++.++++++++.++|+..++ ++..+++
T Consensus 240 ~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 312 (404)
T 2o1b_A 240 NGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKK-------YQTHTNAGMFGALQDAAIYALNHYDDFLEEQSNVF 312 (404)
T ss_dssp THHHHEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHH-------HHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred CCCCCEEEEEecchhccCchhheEeEecCHHHHHHHHH-------HHhhccCCCCHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 122233457899997333899999999999988863 13345678899999999888876321 3456677
Q ss_pred HHHHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCE
Q 010250 405 NKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDN 475 (514)
Q Consensus 405 ~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~ 475 (514)
+++.+++.+.|+++ ... .+.+. |.++++.+.+.. ....+.+.|+ ++||++.++ .+.
T Consensus 313 ~~~~~~l~~~L~~~-g~~---~~~~~~g~~~~~~~~~~~-----------~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~ 377 (404)
T 2o1b_A 313 KTRRDRFEAMLAKA-DLP---FVHAKGGIYVWLETPPGY-----------DSEQFEQFLVQEKSILVAPGKPFGENGNRY 377 (404)
T ss_dssp HHHHHHHHHHHHHT-TCC---EECCCBSSEEEEECCTTC-----------CHHHHHHHHHHHHCEECEESGGGCGGGTTE
T ss_pred HHHHHHHHHHHHhc-CCe---ecCCCcceEEEEeCCCCC-----------CHHHHHHHHHHHCCEEEeCchhhCcCCCCe
Confidence 78888888888775 222 22333 455777775311 1345777776 579999874 357
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 476 IMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 476 iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
+||+++. ++++|++++++|++++++
T Consensus 378 iRis~~~--~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 378 VRISLAL--DDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp EEEECCS--CTTHHHHHHHHHHGGGGG
T ss_pred EEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 9999764 889999999999987754
No 80
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.95 E-value=2.5e-26 Score=240.47 Aligned_cols=345 Identities=12% Similarity=0.108 Sum_probs=231.5
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc----CcCCCCeEEEeCChhHH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----TASKMAKVFFTNSGSEA 174 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~----~~~~~~~v~~~~sGseA 174 (514)
+..+|||.+|... ..++.++++.+++.+++++.......+. +.....+|.+.|++++ +..+.++|++++||++|
T Consensus 75 ~~~~i~l~~g~p~-~~~~p~~~v~~a~~~~l~~~~~~~~~Y~-~~~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~a 152 (448)
T 3aow_A 75 TSDIISLAGGLPN-PKTFPKEIIRDILVEIMEKYADKALQYG-TTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQA 152 (448)
T ss_dssp TSSSEECCCCCCC-GGGSCHHHHHHHHHHHHHHSHHHHHSCC-CTTCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHH
T ss_pred CCCcEeCCCCCCC-chhCCHHHHHHHHHHHHHhhhHHHhCCC-CCCCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHH
Confidence 4568999988764 3457889999999999876321000111 1222345555555554 32145799999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250 175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254 (514)
Q Consensus 175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
++.+++++. ..++.|++.+++|++....... .|... ..++.... +
T Consensus 153 l~~~~~~l~--------~~Gd~Vlv~~p~y~~~~~~~~~-~g~~~------------~~v~~~~~------g-------- 197 (448)
T 3aow_A 153 LDLIGRVFL--------NPGDIVVVEAPTYLAALQAFNF-YEPQY------------IQIPLDDE------G-------- 197 (448)
T ss_dssp HHHHHHHHC--------CTTCEEEEEESCCHHHHHHHHT-TCCEE------------EEEEEETT------E--------
T ss_pred HHHHHHHHc--------CCCCEEEEeCCChHHHHHHHHH-cCCEE------------EEeccCCC------C--------
Confidence 999999873 2347899999999997543322 12111 11111000 0
Q ss_pred HHHHHHHHHHHHh--CCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc----eec
Q 010250 255 RLANNLEDLILKE--GPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF----GCD 327 (514)
Q Consensus 255 ~~~~~le~li~~~--~~~~~aavivEp-v~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~----~~~ 327 (514)
.++++|++++... ...++++|++.| .++.+|.+ .+.+++++|.++|++||+++|+||+|+++.+.|... ..+
T Consensus 198 ~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~-~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~ 276 (448)
T 3aow_A 198 MKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVT-MNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALD 276 (448)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGC
T ss_pred CCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCC-CCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcC
Confidence 1257788777521 113577775554 46667766 567899999999999999999999999886666421 222
Q ss_pred ccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH--hh--ccHHHH
Q 010250 328 KYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY--KE--RNIVEQ 403 (514)
Q Consensus 328 ~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~--~~--~~~~~~ 403 (514)
..+...++.+|||.++.| +|+|++++++++++.+... ....+++.++++++++.++|+.. .+ +++.+.
T Consensus 277 ~~~~vi~~~S~SK~~~~G-lriG~v~~~~~l~~~l~~~-------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~ 348 (448)
T 3aow_A 277 NEGRVIYLGTFSKILAPG-FRIGWMVGDPGIIRKMEIA-------KQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKF 348 (448)
T ss_dssp TTSCEEEEEESTTTTCGG-GCCEEEEECHHHHHHHHHH-------HHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCCEEEEccchhhcccc-ccEEEEEeCHHHHHHHHHH-------HHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 223334566899999855 8999999999999888642 23346677899999888888742 11 234566
Q ss_pred HHHHHHHHHhhhhhc-cCCCceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---------
Q 010250 404 VNKIAPKFQDGVKAF-SDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--------- 472 (514)
Q Consensus 404 ~~~~~~~l~~~L~~l-~~~~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--------- 472 (514)
++++.+++.+.|++. .. .+..+. ..|+++++.+.+.. ....+.+.|.++||++.++
T Consensus 349 ~~~~~~~l~~~L~~~~~~--g~~~~~p~~g~~~~v~~~~~~-----------~~~~l~~~l~~~gV~v~pg~~f~~~~~~ 415 (448)
T 3aow_A 349 YKPRRDAMLEALEEFMPE--GVKWTKPEGGMFIWVTLPDGI-----------DSKKMLERAIKKGVAYVPGEAFYAHRDV 415 (448)
T ss_dssp HHHHHHHHHHHHHHHCCT--TCEECCCSBSSEEEEECSTTC-----------CHHHHHHHHHHTTEECEEGGGGSTTCCC
T ss_pred HHHHHHHHHHHHHHhCCC--CeEEeCCCccEEEEEEcCCCC-----------CHHHHHHHHHHCCcEEEcchhhcCCCCC
Confidence 667778888888763 21 122222 23677788875321 1456888999999999873
Q ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 473 GDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 473 g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
.+.+|++++. .++++|++++++|.+++++.
T Consensus 416 ~~~iRls~~~-~~~e~i~~~~~~L~~~l~~~ 445 (448)
T 3aow_A 416 KNTMRLNFTY-VDEDKIMEGIKRLAETIKEE 445 (448)
T ss_dssp CSEEEEECSS-SCTHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCC-CCHHHHHHHHHHHHHHHHHH
Confidence 2569999775 48999999999999998754
No 81
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.95 E-value=4.7e-27 Score=244.88 Aligned_cols=353 Identities=11% Similarity=0.060 Sum_probs=230.3
Q ss_pred EeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc------c---cccccCCchHHHHHHHHHHhcC-------
Q 010250 95 YDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY------H---SFWNRTTKPSLDLAKELLEMFT------- 158 (514)
Q Consensus 95 ~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~------~---~~~~~~~~~~~ela~~L~~~~~------- 158 (514)
||.++|.+.++..|...+.++ +|.+.+++.++.....+. . ..+. ......+|++.|++++.
T Consensus 31 y~~~~~p~~~i~lg~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~-~~~g~~~l~~~la~~~~~~~~~~~ 107 (435)
T 3piu_A 31 YHEVHNTNGIIQMGLAENQLC--FDLLESWLAKNPEAAAFKKNGESIFAELALFQ-DYHGLPAFKKAMVDFMAEIRGNKV 107 (435)
T ss_dssp CBTTTBTTSBEECSSCCCCSS--HHHHHHHHHHCTTGGGTEETTEECHHHHHHCC-CTTCCHHHHHHHHHHHHHHTTTSS
T ss_pred CCcccCCCCeEEecccccccc--HHHHHHHHHhCccccccccccccccccccccC-CCCCcHHHHHHHHHHHHHhhCCCC
Confidence 778888777766676666666 688888887765532211 0 1111 12223577777777663
Q ss_pred cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC
Q 010250 159 ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH 238 (514)
Q Consensus 159 ~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 238 (514)
....+++++++||++|++.+++.++ ..++.|++.+++|++.........|..... ++...
T Consensus 108 ~~~~~~v~~~~gg~~a~~~~~~~l~--------~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~------------~~~~~ 167 (435)
T 3piu_A 108 TFDPNHLVLTAGATSANETFIFCLA--------DPGEAVLIPTPYYPGFDRDLKWRTGVEIVP------------IHCTS 167 (435)
T ss_dssp CCCGGGEEEEEHHHHHHHHHHHHHC--------CTTCEEEEEESCCTTHHHHTTTTTCCEEEE------------EECCG
T ss_pred CCCHHHEEEcCChHHHHHHHHHHhc--------CCCCeEEECCCccccHHHHHHHhcCCEEEE------------eeCCC
Confidence 0246799999999999999998874 334689999999987654332123322111 11110
Q ss_pred --cccCCCCCCChhHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechh
Q 010250 239 --YWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVI 314 (514)
Q Consensus 239 --~~~~~~~~~~~~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~ 314 (514)
.|+ .++++|++++.+. ...++++|++++.++++|.+. +.+.+++|+++|++||+++|+||+|
T Consensus 168 ~~~~~-------------~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~Dea~ 233 (435)
T 3piu_A 168 SNGFQ-------------ITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTM-TRNELYLLLSFVEDKGIHLISDEIY 233 (435)
T ss_dssp GGTSC-------------CCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTT
T ss_pred ccCCc-------------CCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCC-CHHHHHHHHHHHHHcCCEEEEeccc
Confidence 011 0257777777642 223677888887788888755 5678999999999999999999999
Q ss_pred cCccccccccee-ccc----CCC-----Cc----hhchhhhhc-CCcccceeEEe-CHHHHHHhhhccCCCCcccccCCC
Q 010250 315 CAFGRLGTMFGC-DKY----SIK-----PD----LVSFAKALS-SAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTY 378 (514)
Q Consensus 315 tG~gr~G~~~~~-~~~----gv~-----pD----iv~~sK~l~-gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~ 378 (514)
+++++.|..+.. ... ++. +| +.++||+++ +| +|+|++++ ++++.+.+.. +..++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~---------~~~~~ 303 (435)
T 3piu_A 234 SGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK---------MSSFG 303 (435)
T ss_dssp GGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGG-GCEEEEEESCHHHHHHHHH---------HGGGS
T ss_pred cccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCc-eeEEEEEeCCHHHHHHHHH---------HhhcC
Confidence 988777754321 111 111 44 447899997 45 89999999 5677777753 22345
Q ss_pred CCcHHHHHHHHHHHHHHh---h--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeee-eeEEEEEccCCCCCCCCCCcc
Q 010250 379 SGHPVSCAVAIEALKIYK---E--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEW 452 (514)
Q Consensus 379 ~~~pl~~aaa~aal~~~~---~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g-~~~~i~~~~~~~~~~~~~~~~ 452 (514)
..++++++++.++++..+ + ++..++++++.+++++.|+++ .+ ..+.+.+ +++++.+....... ..
T Consensus 304 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---g~-~~~~~~~g~~~~~~l~~~~~~~-----~~ 374 (435)
T 3piu_A 304 LVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS---GI-SCLNGNAGLFCWVDMRHLLRSN-----TF 374 (435)
T ss_dssp CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---TC-EECCCCSSSEEEEECGGGSSSS-----SH
T ss_pred CCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CC-cccCCCeeEEEEEEcccccccC-----Cc
Confidence 567888888777776322 1 234667777778888888765 22 2223344 78888886532110 11
Q ss_pred chHHHHHHHHHHC-CcEEEee-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 453 GIGAYFGAQCEKH-GMLVRVS-------GDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 453 ~~~~~~~~~l~~~-Gv~~~~~-------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
.....+...|+++ ||++.++ .+.+||+++.. |+++|++++++|+++++++.
T Consensus 375 ~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~-~~e~i~~~l~~l~~~l~~~~ 433 (435)
T 3piu_A 375 EAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANL-PERTLDLAMQRLKAFVGEYY 433 (435)
T ss_dssp HHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSS-CHHHHHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCC-CHHHHHHHHHHHHHHHHHHh
Confidence 1244577888777 9999863 25799998655 99999999999999987653
No 82
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.95 E-value=8.3e-26 Score=230.18 Aligned_cols=324 Identities=14% Similarity=0.116 Sum_probs=223.2
Q ss_pred EEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc-----CcCCCCeEEEeCChhHHHHH
Q 010250 103 LDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF-----TASKMAKVFFTNSGSEANDT 177 (514)
Q Consensus 103 lD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~-----~~~~~~~v~~~~sGseA~~~ 177 (514)
|||.+|.. ++| .+|++.+++.+++++.......+ +.....++.+.+++++ .+.+.+++++++||++|++.
T Consensus 33 idl~~~~~--~~~-~~~~v~~a~~~~~~~~~~~~~~y--~~~~~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~ 107 (369)
T 3cq5_A 33 IRLNTNEN--PYP-PSEALVADLVATVDKIATELNRY--PERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQ 107 (369)
T ss_dssp EECSSCCC--CSC-CCHHHHHHHHHHHHHHGGGTTSC--CCTTCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHH
T ss_pred eeccCCCC--CCC-CCHHHHHHHHHHHHhcccccccC--CCccHHHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHH
Confidence 89988853 567 78999999999987631111111 1112246667776662 12345789999999999999
Q ss_pred HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
+++.+. .++++|++.+++||+........ |.... .++..+.|. .++
T Consensus 108 ~~~~l~--------~~gd~Vl~~~~~y~~~~~~~~~~-g~~~~------------~v~~~~~~~-------------~d~ 153 (369)
T 3cq5_A 108 LLQAFG--------GPGRTALGFQPSYSMHPILAKGT-HTEFI------------AVSRGADFR-------------IDM 153 (369)
T ss_dssp HHHHHC--------STTCEEEEEESSCTHHHHHHHHT-TCEEE------------EEECCTTSS-------------CCH
T ss_pred HHHHhc--------CCCCEEEEcCCChHHHHHHHHHc-CCEEE------------EecCCcCCC-------------CCH
Confidence 998763 23478999999999875433322 21111 111111111 014
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccccee-cccC-CCCch
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC-DKYS-IKPDL 335 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~-~~~g-v~pDi 335 (514)
+++++.+.+. ++++|+++++++++|.+.+ ++++.++|+.+++++|+||+|+++++....... +.++ ...++
T Consensus 154 ~~l~~~i~~~---~~~~v~~~~~~nptG~~~~----~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~ 226 (369)
T 3cq5_A 154 DVALEEIRAK---QPDIVFVTTPNNPTGDVTS----LDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVS 226 (369)
T ss_dssp HHHHHHHHHH---CCSEEEEESSCTTTCCCCC----HHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEE
T ss_pred HHHHHHhhcc---CCCEEEEeCCCCCCCCCCC----HHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEE
Confidence 7777777642 3567788888888998876 788889999999999999999988643222221 2233 33445
Q ss_pred hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhh
Q 010250 336 VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDG 414 (514)
Q Consensus 336 v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~ 414 (514)
.+++|.++.+++|+|++++++++++.+... ..+++.++++++++.++|+..+ -++..++++++.+++.+.
T Consensus 227 ~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 297 (369)
T 3cq5_A 227 RTMSKAFDFAGGRLGYFVANPAFIDAVMLV---------RLPYHLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAAR 297 (369)
T ss_dssp EESSSTTSCGGGCCEEEEECTHHHHHHHTT---------SCTTCSCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHH
T ss_pred EechHhcCCcccceEEEEeCHHHHHHHHHc---------CCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 678999973338999999999998888742 2356788999999999987532 145677888888899888
Q ss_pred hhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--CCEEEEeCCCCCCHHHHHHH
Q 010250 415 VKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--GDNIMMSPPFIMSPEEVDEL 492 (514)
Q Consensus 415 L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--g~~iRi~p~~~~t~e~id~~ 492 (514)
|++. . +...++.|.++.+.+.. ....+.+.|.++||++.++ .+.+|++++ +++|++++
T Consensus 298 L~~~-g---~~~~~~~~~~~~~~~~~-------------~~~~l~~~l~~~gi~v~~~~~~~~iRis~~---~~~~i~~~ 357 (369)
T 3cq5_A 298 LEEL-G---YAVVPSESNFVFFGDFS-------------DQHAAWQAFLDRGVLIRDVGIAGHLRTTIG---VPEENDAF 357 (369)
T ss_dssp HHHH-T---CEEECCSSSEEEEECCS-------------SHHHHHHHHHHTTEECBCCSCTTEEEEECC---CHHHHHHH
T ss_pred HHhC-C---CEECCCCCeEEEEECCC-------------CHHHHHHHHHHCCEEEEECCCCCeEEEEeC---CHHHHHHH
Confidence 8774 2 22234567777776641 1345778899999999876 367999975 89999999
Q ss_pred HHHHHHHHH
Q 010250 493 ISKYGKALK 501 (514)
Q Consensus 493 ~~~l~~~l~ 501 (514)
+++|+++++
T Consensus 358 ~~~l~~~~~ 366 (369)
T 3cq5_A 358 LDAAAEIIK 366 (369)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999988763
No 83
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.95 E-value=6.4e-26 Score=232.30 Aligned_cols=335 Identities=12% Similarity=0.052 Sum_probs=222.1
Q ss_pred EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCC-eEEEeCChhHHHHHH
Q 010250 101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEANDTQ 178 (514)
Q Consensus 101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~-~v~~~~sGseA~~~A 178 (514)
.+|||.++.. .+| .+|.+.+++.++++.....+....+..+....+++.+.+.++ +.+.+ ++++++||++|++.+
T Consensus 31 ~~i~l~~~~~--~~~-~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~ 107 (386)
T 1u08_A 31 QAINLSQGFP--DFD-GPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAA 107 (386)
T ss_dssp TCEECCCSSC--SSC-CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHH
T ss_pred CeEEecCCCC--CCC-CCHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHH
Confidence 4799988753 466 689999999999875211111111123333444444444343 23456 899999999999999
Q ss_pred HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC-cccCCCCCCChhHHHHHHH
Q 010250 179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGETEEEYSTRLA 257 (514)
Q Consensus 179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 257 (514)
++.+. .++++|++.+++||+....... .|... ..++... .|. .++
T Consensus 108 ~~~~~--------~~gd~vl~~~p~~~~~~~~~~~-~g~~~------------~~v~~~~~~~~-------------~d~ 153 (386)
T 1u08_A 108 ITALV--------RNGDEVICFDPSYDSYAPAIAL-SGGIV------------KRMALQPPHFR-------------VDW 153 (386)
T ss_dssp HHHHC--------CTTCEEEEEESCCTTHHHHHHH-TTCEE------------EEEECCTTTCC-------------CCH
T ss_pred HHHhC--------CCCCEEEEeCCCchhHHHHHHH-cCCEE------------EEeecCcccCc-------------CCH
Confidence 98763 2356899999999987543222 22111 1111110 011 114
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc----eec-ccCCC
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF----GCD-KYSIK 332 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~----~~~-~~gv~ 332 (514)
++|++.+. +++++|+++..++.+|.+. +.+++++|.++|++||+++|+||+|++|.+.|... ... .++..
T Consensus 154 ~~l~~~l~----~~~~~v~l~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 228 (386)
T 1u08_A 154 QEFAALLS----ERTRLVILNTPHNPSATVW-QQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERA 228 (386)
T ss_dssp HHHHHHCC----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTE
T ss_pred HHHHHhhc----ccCEEEEEeCCCCCCCccC-CHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcE
Confidence 67776663 4577788877788888765 56899999999999999999999999887666421 111 23444
Q ss_pred CchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHH
Q 010250 333 PDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPK 410 (514)
Q Consensus 333 pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~ 410 (514)
..+.+++|.++.+++++|++++++++++.+.. ..+..+++.++++++++.++|+..++ +++.++++++.++
T Consensus 229 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 301 (386)
T 1u08_A 229 VAVSSFGKTYHMTGWKVGYCVAPAPISAEIRK-------VHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDI 301 (386)
T ss_dssp EEEEEHHHHTTCGGGCCEEEECCHHHHHHHHH-------HHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHH
T ss_pred EEEecchhhcCCcccceEEEEcCHHHHHHHHH-------HHHhhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 44568999998433899999999999888863 13335778888888888888875321 3567788888888
Q ss_pred HHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee---------CCEEEEeC
Q 010250 411 FQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS---------GDNIMMSP 480 (514)
Q Consensus 411 l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~---------g~~iRi~p 480 (514)
+.+.|+++ ...+. ....|.++++++..... . ....+.+.|+ ++||++.++ .+.+||++
T Consensus 302 l~~~L~~~-g~~~~--~~~~g~~~~~~~~~~~~-~--------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~ 369 (386)
T 1u08_A 302 LVNALNES-RLEIL--PCEGTYFLLVDYSAVST-L--------DDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCF 369 (386)
T ss_dssp HHHHTTSS-SCEEC--CCCBSSEEEEECTTTCC-S--------CHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEEC
T ss_pred HHHHHHHC-CCeec--CCCceEEEEEecCCCCC-C--------CHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEE
Confidence 88888765 22111 11235677787753210 0 1345777776 689999863 24699997
Q ss_pred CCCCCHHHHHHHHHHHHH
Q 010250 481 PFIMSPEEVDELISKYGK 498 (514)
Q Consensus 481 ~~~~t~e~id~~~~~l~~ 498 (514)
+ .++++|++++++|++
T Consensus 370 ~--~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 370 A--KKESTLLAAAERLRQ 385 (386)
T ss_dssp C--SCHHHHHHHHHHHTT
T ss_pred c--CCHHHHHHHHHHHhh
Confidence 5 589999999998864
No 84
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.95 E-value=7e-26 Score=232.84 Aligned_cols=343 Identities=13% Similarity=0.052 Sum_probs=226.6
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-cc---cc-ccCCchHHHHHHHHHHhcCcCCCCeEEEeCChh
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HS---FW-NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGS 172 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~~---~~-~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGs 172 (514)
+|+.+++|..+. .|+.+|++++|+.+++++.... +. .+ ..+.+...++++.|+++++..+.++++|++||+
T Consensus 20 ~g~~~i~l~~~~----~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t 95 (406)
T 1kmj_A 20 NGLPLAYLDSAA----SAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTT 95 (406)
T ss_dssp TTEECEECCTTT----CCCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHH
T ss_pred CCCceEEecCCc----cCCCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEeCChh
Confidence 555444443331 2468999999999999764211 10 00 013455678999999998532357899999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCCh
Q 010250 173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETE 249 (514)
Q Consensus 173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (514)
+|++.+++.++.++ . .++++|++.+++||+..... ....|... ..++.+..+.
T Consensus 96 ~a~~~~~~~~~~~~---~-~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~------------~~~~~~~~~~-------- 151 (406)
T 1kmj_A 96 EGINLVANSWGNSN---V-RAGDNIIISQMEHHANIVPWQMLCARVGAEL------------RVIPLNPDGT-------- 151 (406)
T ss_dssp HHHHHHHHHTHHHH---C-CTTCEEEEETTCCGGGTHHHHHHHHHHTCEE------------EEECBCTTSC--------
T ss_pred HHHHHHHHHhhhhc---C-CCCCEEEEecccchHHHHHHHHHHHhCCCEE------------EEEecCCCCC--------
Confidence 99999999874321 1 23578999999999864221 11112111 1111111110
Q ss_pred hHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceeccc
Q 010250 250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKY 329 (514)
Q Consensus 250 ~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~ 329 (514)
.++++|++.+. +++++|+++++++.+|.+.+ +++|.++|++||+++|+||+|+ +|.. .+...
T Consensus 152 -----~d~~~l~~~l~----~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~~~~-~g~~--~~~~~-- 213 (406)
T 1kmj_A 152 -----LQLETLPTLFD----EKTRLLAITHVSNVLGTENP----LAEMITLAHQHGAKVLVDGAQA-VMHH--PVDVQ-- 213 (406)
T ss_dssp -----BCGGGHHHHCC----TTEEEEEEESBCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTT-TTTS--CCCHH--
T ss_pred -----cCHHHHHHHhc----cCCeEEEEeCCCccccCcCC----HHHHHHHHHHcCCEEEEEchhh-cCCC--CCccc--
Confidence 01356666663 46889999999999998887 9999999999999999999997 4443 11222
Q ss_pred CCCCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCc--------------ccccCCCCCcHHHHHHHH-HHH
Q 010250 330 SIKPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS--------------FSHGFTYSGHPVSCAVAI-EAL 392 (514)
Q Consensus 330 gv~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~--------------~~~~~t~~~~pl~~aaa~-aal 392 (514)
...+|++ +++|.++. .++|++++++++++.+......... .....+.+.+++.+++++ +++
T Consensus 214 ~~~~d~~~~s~~K~~g~--~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al 291 (406)
T 1kmj_A 214 ALDCDFYVFSGHKLYGP--TGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAAL 291 (406)
T ss_dssp HHTCSEEEEEGGGTTSC--TTCEEEEECHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHH
T ss_pred ccCCCEEEEEchhccCC--CCcEEEEEeHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHH
Confidence 2347876 58898843 3389999999998887632100000 001122344556666555 788
Q ss_pred HHHhhc---cHHHHHHHHHHHHHhhhhhccCCCceeEEEe--eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCc
Q 010250 393 KIYKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG--TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM 467 (514)
Q Consensus 393 ~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g--~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 467 (514)
+.+.+. ++.++++++.+++.+.|+++. .+..... .|.++.+.+... ....+.+.|.++||
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~gi 356 (406)
T 1kmj_A 292 EYVSALGLNNIAEYEQNLMHYALSQLESVP---DLTLYGPQNRLGVIAFNLGKH------------HAYDVGSFLDNYGI 356 (406)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHTTST---TEEEESCTTCCSEEEEEETTC------------CHHHHHHHHHHTTE
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCCCcCCEEEEEECCC------------CHHHHHHHHhhCCc
Confidence 877643 567788888899998887752 2222223 577777776421 03457788999999
Q ss_pred EEEeeC-------------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 468 LVRVSG-------------DNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 468 ~~~~~g-------------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
.+.++. +.+|++++..+|++|+++++++|+++++.+
T Consensus 357 ~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 357 AVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp ECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence 998642 579999999899999999999999988653
No 85
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.95 E-value=3.2e-26 Score=235.40 Aligned_cols=337 Identities=11% Similarity=0.090 Sum_probs=223.8
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc----cccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChh
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF----YHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGS 172 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~----~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGs 172 (514)
+|+.+|||.+| .+....+|+|.+|+.+++++... .+....+..+....+++.+.+.++ +.+.+++++++||+
T Consensus 33 ~~~~~i~l~~~---~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~ 109 (398)
T 3ele_A 33 GKENVYDFSIG---NPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAA 109 (398)
T ss_dssp CGGGCEECCSC---CCCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHH
T ss_pred CCCCeEEeecC---CCCCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHH
Confidence 35789999887 33334789999999999876321 111111223444555555555443 23568999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhH
Q 010250 173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEE 251 (514)
Q Consensus 173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 251 (514)
+|++.+++.+. .+++++|++.+++|++........+. .. ..++.. +.|.
T Consensus 110 ~al~~~~~~l~-------~~g~d~vl~~~p~~~~~~~~~~~~g~-~~------------~~v~~~~~~~~---------- 159 (398)
T 3ele_A 110 ASLSICFRALT-------SDAYDEFITIAPYFPEYKVFVNAAGA-RL------------VEVPADTEHFQ---------- 159 (398)
T ss_dssp HHHHHHHHHHC-------CSTTCEEEEESSCCTHHHHHHHHTTC-EE------------EEECCCTTTSS----------
T ss_pred HHHHHHHHHHc-------CCCCCEEEEeCCCchhhHHHHHHcCC-EE------------EEEecCCcCCc----------
Confidence 99999999873 13337899999999987543332221 11 111111 0011
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh------cCCEEEEechhcCcccccccce
Q 010250 252 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK------YDILFIADEVICAFGRLGTMFG 325 (514)
Q Consensus 252 ~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~------~gillI~DEv~tG~gr~G~~~~ 325 (514)
.++++|++.+. +++.+|++...++++|.+. +.+.+++|.++|++ ||+++|+||+|++|.+.|....
T Consensus 160 ---~d~~~l~~~l~----~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~ 231 (398)
T 3ele_A 160 ---IDFDALEERIN----AHTRGVIINSPNNPSGTVY-SEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVP 231 (398)
T ss_dssp ---CCHHHHHHTCC----TTEEEEEECSSCTTTCCCC-CHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCC
T ss_pred ---CCHHHHHHHhC----cCCCEEEEcCCCCCCCCCC-CHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcC
Confidence 01466766653 3567777766678888765 55779999999999 9999999999999877774322
Q ss_pred --ecccCCCCchhchhhhhc-CCcccceeEEeCHHHHH------HhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh
Q 010250 326 --CDKYSIKPDLVSFAKALS-SAYMPIGAILVSPEVSE------VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK 396 (514)
Q Consensus 326 --~~~~gv~pDiv~~sK~l~-gG~~pig~v~~~~~i~~------~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~ 396 (514)
.+.++....+.++||.++ .| +++|++++++++++ .+.. ......+++.+++++.++.+.++
T Consensus 232 ~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~a~~~~l~--- 301 (398)
T 3ele_A 232 FVTKYYDNTLVCYSYSKSLSLPG-ERIGYVLVPDEVYDKAELYAAVCG------AGRALGYVCAPSLFQKMIVKCQG--- 301 (398)
T ss_dssp CGGGTCSSEEEEEESTTTSSCTT-TCCEEEECCTTSTTHHHHHHHHHH------HHHHTTCCCSCHHHHHHHTTCTT---
T ss_pred ChHhhcCCeEEEEehhhcCCCcc-ceeEEEEEcchhhhHHHHHHHHHH------HhhhccccCCCHHHHHHHHHHhc---
Confidence 233333333447899998 55 89999999987433 2221 01122356677777777665554
Q ss_pred hccHHHHHHHHHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---
Q 010250 397 ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--- 472 (514)
Q Consensus 397 ~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--- 472 (514)
+....++++++++++.+.|+++ .... +... |.++++.+.... ...+.+.|.++||++.++
T Consensus 302 ~~~~~~~~~~~~~~l~~~L~~~-g~~~---~~~~~~~~~~~~~~~~~------------~~~~~~~l~~~gi~v~~g~~~ 365 (398)
T 3ele_A 302 ATGDINAYKENRDLLYEGLTRI-GYHC---FKPDGAFYMFVKALEDD------------SNAFCEKAKEEDVLIVAADGF 365 (398)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHH-TCCE---ECCSBSSEEEEECSSSC------------HHHHHHHHHTTTEECEESGGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHc-CCee---cCCCeeEEEEEEcCCCC------------HHHHHHHHHHCCEEEeCcccc
Confidence 3446788999999999999876 2222 2223 444677664221 456778899999999875
Q ss_pred --CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 473 --GDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 473 --g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
.+.+||++ .+++++|++++++|+++++++
T Consensus 366 ~~~~~iRis~--~~~~e~i~~~l~~l~~~l~~~ 396 (398)
T 3ele_A 366 GCPGWVRISY--CVDREMIKHSMPAFEKIYKKY 396 (398)
T ss_dssp TCTTEEEEEC--CSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEe--cCCHHHHHHHHHHHHHHHHHh
Confidence 36799995 479999999999999998764
No 86
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.95 E-value=2.6e-26 Score=237.39 Aligned_cols=342 Identities=13% Similarity=0.063 Sum_probs=223.5
Q ss_pred EEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-CCCC-eEEEeCChhHHHHHHH
Q 010250 102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKMA-KVFFTNSGSEANDTQV 179 (514)
Q Consensus 102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~-~v~~~~sGseA~~~Al 179 (514)
+|||.++. ..+| .+|.+.+++.+++++....+....+..+....+++.+.+.++. ...+ ++++++||++|++.++
T Consensus 27 ~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~ 103 (411)
T 2o0r_A 27 AVNLGQGF--PDED-GPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAV 103 (411)
T ss_dssp CEESSCSS--CSSC-CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHH
T ss_pred eeeccCcC--CCCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHH
Confidence 78998875 3466 6899999999999763111111111223334444444443331 2456 8999999999999999
Q ss_pred HHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC---cccCCCCCCChhHHHHHH
Q 010250 180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH---YWRYAHPGETEEEYSTRL 256 (514)
Q Consensus 180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 256 (514)
+.+. .++++|++.+++||+...... ..|... ..++... .|. .+
T Consensus 104 ~~~~--------~~gd~Vl~~~~~y~~~~~~~~-~~g~~~------------~~v~~~~~~~~~~-------------~d 149 (411)
T 2o0r_A 104 LGLV--------EPGSEVLLIEPFYDSYSPVVA-MAGAHR------------VTVPLVPDGRGFA-------------LD 149 (411)
T ss_dssp HHHC--------CTTCEEEEEESCCTTHHHHHH-HTTCEE------------EEEECEEETTEEE-------------CC
T ss_pred HHhc--------CCCCEEEEeCCCcHhHHHHHH-HcCCEE------------EEeeccccccCCC-------------CC
Confidence 8773 234789999999999753322 222211 1111100 011 11
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-ceecc----cCC
Q 010250 257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGCDK----YSI 331 (514)
Q Consensus 257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~~~----~gv 331 (514)
+++|++.+. +++++|+++.+++++|.+. +.+++++|.++|++||+++|+||+|+++++.|.. ..... .+.
T Consensus 150 ~~~l~~~l~----~~~~~v~l~~~~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 224 (411)
T 2o0r_A 150 ADALRRAVT----PRTRALIINSPHNPTGAVL-SATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAER 224 (411)
T ss_dssp HHHHHHHCC----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGG
T ss_pred HHHHHHhhc----cCceEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCC
Confidence 467777664 3577888888888888764 5789999999999999999999999988776642 22222 222
Q ss_pred CCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHH
Q 010250 332 KPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAP 409 (514)
Q Consensus 332 ~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~ 409 (514)
...+.+++|.++.+++|+|++++++++++.+... ....+++.++++++++.++|+..++ +++.++++++.+
T Consensus 225 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 297 (411)
T 2o0r_A 225 TITISSAAKMFNCTGWKIGWACGPAELIAGVRAA-------KQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRD 297 (411)
T ss_dssp EEEEEEHHHHTTCTTTCEEEEECCHHHHHHHHHH-------HHHHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred EEEEeechhhcCCccceEEEEeeCHHHHHHHHHH-------HhhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 3334578999983338999999999998887631 2334667778888888888875322 346777888888
Q ss_pred HHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee----------------
Q 010250 410 KFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS---------------- 472 (514)
Q Consensus 410 ~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~---------------- 472 (514)
++.+.|+++ ...+. ....|.++++.+..... . ....+.+.|+ ++||++.++
T Consensus 298 ~l~~~L~~~-g~~~~--~~~~g~~~~~~~~~~~~-~--------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~ 365 (411)
T 2o0r_A 298 RLAAGLTEI-GFAVH--DSYGTYFLCADPRPLGY-D--------DSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQAD 365 (411)
T ss_dssp HHHHHHHHH-TCEEC--CCCBSSEEEEECGGGTC-C--------CHHHHHHHHHHHHSEECEEGGGGSCCC--------C
T ss_pred HHHHHHHHc-CCEec--CCCeeEEEEEecCCCCC-C--------CHHHHHHHHHHhCCEEEcChhhhCCCcccccccccc
Confidence 888888875 22221 12235677888754210 0 1345777776 679998753
Q ss_pred --CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250 473 --GDNIMMSPPFIMSPEEVDELISKYGKALKATEER 506 (514)
Q Consensus 473 --g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~ 506 (514)
.+.+||++. .++++|++++++|++++++....
T Consensus 366 ~~~~~iRis~~--~~~e~i~~~~~~l~~~~~~~~~~ 399 (411)
T 2o0r_A 366 VWNHLVRFTFC--KRDDTLDEAIRRLSVLAERPATG 399 (411)
T ss_dssp CGGGCEEEECC--SCHHHHHHHHHHHGGGGC-----
T ss_pred CCCCeEEEEec--CCHHHHHHHHHHHHHHHhccCcC
Confidence 235999964 58999999999999987765543
No 87
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.94 E-value=4e-26 Score=231.70 Aligned_cols=326 Identities=14% Similarity=0.099 Sum_probs=222.9
Q ss_pred CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250 97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 176 (514)
Q Consensus 97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~ 176 (514)
.+|+.+|||.++. +.++ .+|+|++|+.++++...... ...+.....++.+.|+++++ .+.+++++++||++|++
T Consensus 23 ~~~~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~--~~y~~~~~~~lr~~la~~~g-~~~~~i~~t~g~~~al~ 96 (360)
T 3hdo_A 23 PDIASWIKLNTNE--NPYP-PSPEVVKAILEELGPDGAAL--RIYPSASSQKLREVAGELYG-FDPSWIIMANGSDEVLN 96 (360)
T ss_dssp SCCTTSEECSSCC--CSSC-CCHHHHHHHHHHHTTTCGGG--GSCCCSSCHHHHHHHHHHHT-CCGGGEEEESSHHHHHH
T ss_pred ccccceeeccCCC--CCCC-CCHHHHHHHHHHHhcccchh--hcCCCCchHHHHHHHHHHhC-cCcceEEEcCCHHHHHH
Confidence 4778999998875 3455 78999999999997642111 11122334788999999884 45679999999999999
Q ss_pred HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHH
Q 010250 177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 256 (514)
Q Consensus 177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (514)
.+++... ..+++|++.+++|++........+.... .++..+.|.
T Consensus 97 ~~~~~l~--------~~gd~Vl~~~p~~~~~~~~~~~~g~~~~-------------~v~~~~~~~--------------- 140 (360)
T 3hdo_A 97 NLIRAFA--------AEGEEIGYVHPSYSYYGTLAEVQGARVR-------------TFGLTGDFR--------------- 140 (360)
T ss_dssp HHHHHHC--------CTTCEEEEESSSCTHHHHHHHHHTCEEE-------------EECBCTTSS---------------
T ss_pred HHHHHHh--------CCCCEEEEcCCChHHHHHHHHHCCCEEE-------------EeeCCCCCC---------------
Confidence 9998763 2347899999999987543333222111 111111111
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh
Q 010250 257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV 336 (514)
Q Consensus 257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv 336 (514)
+ ++++....+ .+++++..++++|.+.+ +++|+++|+++|+++|+||+|++|+..+.....+.++....+.
T Consensus 141 ~---~~l~~~~~~---~~v~i~~p~nptG~~~~----~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~ 210 (360)
T 3hdo_A 141 I---AGFPERYEG---KVFFLTTPNAPLGPSFP----LEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTR 210 (360)
T ss_dssp B---TTCCSSBCS---SEEEEESSCTTTCCCCC----HHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEE
T ss_pred H---HHHHhhcCC---CEEEEeCCCCCCCCCcC----HHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEe
Confidence 0 111111121 25555556788888887 7899999999999999999999874332221223333333445
Q ss_pred chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHhhh
Q 010250 337 SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQDGV 415 (514)
Q Consensus 337 ~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L 415 (514)
+++|.++.+++++|++++++++++.+... ..+++.++++++++.++|+..+. ++..++++++.+++.+.|
T Consensus 211 s~sK~~g~~G~r~G~~~~~~~~~~~~~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L 281 (360)
T 3hdo_A 211 TLSKSYSLAGMRIGLAIARPEVIAALDKI---------RDHYNLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTEL 281 (360)
T ss_dssp ESTTTTSCTTSCCEEEECCHHHHHHHHHH---------SCSCCSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHhhcCCccceeeEeeCHHHHHHHHHh---------CCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999874338999999999999988742 13577899999999999885221 345677888888888888
Q ss_pred hhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-----CEEEEeCCCCCCHHHHH
Q 010250 416 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----DNIMMSPPFIMSPEEVD 490 (514)
Q Consensus 416 ~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-----~~iRi~p~~~~t~e~id 490 (514)
+++ . +...++.|.++.+.+... ....+.+.|.++||++++.+ +.+|++. .+++|++
T Consensus 282 ~~~-~---~~~~~~~~~~~~~~~~~~------------~~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~---~~~~e~~ 342 (360)
T 3hdo_A 282 RSI-G---YDVIPSQGNYLFATPPDR------------DGKRVYDGLYARKVLVRHFSDPLLAHGMRISI---GTREEME 342 (360)
T ss_dssp HHT-T---CEECCCSSSEEEEECTTC------------CHHHHHHHHHHTTEECBCCCSTTTTTSEEEEC---CCHHHHH
T ss_pred HHC-C---CEEcCCCccEEEEECCCC------------CHHHHHHHHHHCCEEEEECCCCCCCCEEEEEc---CCHHHHH
Confidence 775 2 122345677777765421 14567889999999998754 5799994 3999999
Q ss_pred HHHHHHHHHHHH
Q 010250 491 ELISKYGKALKA 502 (514)
Q Consensus 491 ~~~~~l~~~l~~ 502 (514)
+++++|++..+.
T Consensus 343 ~l~~al~~~~~~ 354 (360)
T 3hdo_A 343 QTLAALKEIGEG 354 (360)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHhcc
Confidence 999999887654
No 88
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.94 E-value=6.2e-26 Score=236.21 Aligned_cols=348 Identities=11% Similarity=0.032 Sum_probs=233.0
Q ss_pred eeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhcCc-----CCC
Q 010250 89 SEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFTA-----SKM 162 (514)
Q Consensus 89 ~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~~~-----~~~ 162 (514)
+....+++.+|+.+|||.+|.. .++ .+|+|++|+.+++.... ..+. ......++.+.+++++.. ...
T Consensus 33 ~~~~~~~~~~g~~~i~l~~~~~--~~~-~~~~v~~a~~~~~~~~~~~~y~----~~~g~~~lr~~la~~~~~~~g~~~~~ 105 (437)
T 3g0t_A 33 ALVTNLEKATGTKFCRMEMGVP--GLP-APQIGIETEIQKLREGVASIYP----NLDGLPELKQEASRFAKLFVNIDIPA 105 (437)
T ss_dssp HHHHHHHHHHTCCCEECCCCSC--CSC-CCHHHHHHHHHHHHHTGGGSCC----CTTCCHHHHHHHHHHHHHHHCCCCCG
T ss_pred HHHHHHHHhcCCCEEeccCcCC--CCC-CCHHHHHHHHHHHhCCcCcCCC----CCCChHHHHHHHHHHHHHhhCCCCCc
Confidence 3445566778999999998863 455 78999999999987522 1111 111124555555555421 245
Q ss_pred CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCcc--EEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC-CCc
Q 010250 163 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK--KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC-PHY 239 (514)
Q Consensus 163 ~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~--~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~-~~~ 239 (514)
+++++++||++|++.+++.+... .+ ++ +|++.+++|++........+.... .++. ++.
T Consensus 106 ~~i~~t~g~t~al~~~~~~l~~~-----~~-gd~~~Vl~~~p~~~~~~~~~~~~g~~~~-------------~v~~~~~~ 166 (437)
T 3g0t_A 106 RACVPTVGSMQGCFVSFLVANRT-----HK-NREYGTLFIDPGFNLNKLQCRILGQKFE-------------SFDLFEYR 166 (437)
T ss_dssp GGEEEESHHHHHHHHHHHHHTTS-----CT-TCSCCEEEEESCCHHHHHHHHHHTCCCE-------------EEEGGGGC
T ss_pred ccEEEeCCHHHHHHHHHHHHhcC-----CC-CCccEEEEeCCCcHhHHHHHHHcCCEEE-------------EEeecCCC
Confidence 78999999999999999876200 13 34 799999999987544433222111 0111 000
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250 240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319 (514)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr 319 (514)
+ ..++++|++.+.. ++..+.+++.| ++++|.+. +.+.+++|.++|++||+++|+||+|+++..
T Consensus 167 ------------~-~~d~~~l~~~l~~--~~~~~v~l~~p-~nptG~~~-~~~~l~~i~~~a~~~~~~li~De~~~~~~~ 229 (437)
T 3g0t_A 167 ------------G-EKLREKLESYLQT--GQFCSIIYSNP-NNPTWQCM-TDEELRIIGELATKHDVIVIEDLAYFGMDF 229 (437)
T ss_dssp ------------T-THHHHHHHHHHTT--TCCCEEEEESS-CTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCCT
T ss_pred ------------C-ccCHHHHHHHHhc--CCceEEEEeCC-CCCCCCcC-CHHHHHHHHHHHHHCCcEEEEEcchhhccc
Confidence 0 1235778777732 22334445566 67777665 567799999999999999999999997754
Q ss_pred cccc---------ceecc-cCCCCchhchhhhhc-CCcccceeEEeCHHHHH-H-----------------hhhccCCCC
Q 010250 320 LGTM---------FGCDK-YSIKPDLVSFAKALS-SAYMPIGAILVSPEVSE-V-----------------IHSQSNTLG 370 (514)
Q Consensus 320 ~G~~---------~~~~~-~gv~pDiv~~sK~l~-gG~~pig~v~~~~~i~~-~-----------------l~~~~~~~~ 370 (514)
.+.. ..... .+....+.+++|.++ .| +++|++++++++++ . +.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 301 (437)
T 3g0t_A 230 RKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAG-QRIGVLMISGKLYEREYPDLEESFGRLRFGEALSS------- 301 (437)
T ss_dssp TSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGG-GCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHT-------
T ss_pred CCCcCcccccchhhccCCCCCcEEEEEcCccCCCCcc-ceeEEEEECHHHhhhhhhcccccccccchhHHHHH-------
Confidence 4321 11111 222122447899988 45 89999999999988 6 53
Q ss_pred cccccCCCCCcHHHHHHHHHHHHHHh-----hccHHHHHHHHHHHHHhhhhhccCCCce----eEEE-eeeeeEEEEEcc
Q 010250 371 SFSHGFTYSGHPVSCAVAIEALKIYK-----ERNIVEQVNKIAPKFQDGVKAFSDSPII----GEIR-GTGLILGTEFAD 440 (514)
Q Consensus 371 ~~~~~~t~~~~pl~~aaa~aal~~~~-----~~~~~~~~~~~~~~l~~~L~~l~~~~~~----~~v~-g~g~~~~i~~~~ 440 (514)
......+++.++++++++.++|+... -++..++++++.+++.+.|+++ ..... .... ..|.++++.+..
T Consensus 302 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (437)
T 3g0t_A 302 SALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN-GFNIVYDKDGNEPLADGFYFTVGYKG 380 (437)
T ss_dssp THHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT-TEEESSCEETTEECCSSSEEEEEETT
T ss_pred HHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCEEeccccCCCCCceeEEEEEecCC
Confidence 22344577889999999999998765 2456788888889999988876 21111 0023 456777777751
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-------CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 441 NKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-------DNIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-------~~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
. ....+.+.|.++||.+.+.. +.+|++++. .|+++|++++++|+++++
T Consensus 381 ~------------~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~-~~~e~i~~~~~~l~~~~~ 435 (437)
T 3g0t_A 381 M------------DSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSL-LPESQFPDLEKRLQMLNA 435 (437)
T ss_dssp C------------CHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSS-SCGGGHHHHHHHHHHHHH
T ss_pred C------------CHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEec-CCHHHHHHHHHHHHHHHh
Confidence 1 14568899999999998764 679999874 499999999999998764
No 89
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.94 E-value=1.7e-25 Score=228.97 Aligned_cols=332 Identities=14% Similarity=0.062 Sum_probs=218.1
Q ss_pred CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhh----c-CC
Q 010250 117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNA----L-GR 191 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~----~-~~ 191 (514)
.+|++.+++.+++......+..+....+...+++++++++++ .+.+++++++||++|++.+++.++..... . ..
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~ 120 (397)
T 3f9t_A 42 VLPITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGSLLN-NKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSK 120 (397)
T ss_dssp CCTHHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHHHTT-CTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhC-CCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccC
Confidence 579999999999876432222221234556678899999874 34678999999999999999988643110 0 11
Q ss_pred CCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCc
Q 010250 192 PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPET 271 (514)
Q Consensus 192 ~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~ 271 (514)
.++++|++.+++|++........ |... ..++....++ .++++|++.+.+. +
T Consensus 121 ~~gd~vl~~~~~~~~~~~~~~~~-g~~~------------~~v~~~~~~~-------------~d~~~l~~~i~~~---~ 171 (397)
T 3f9t_A 121 NEHPKIIVPITAHFSFEKGREMM-DLEY------------IYAPIKEDYT-------------IDEKFVKDAVEDY---D 171 (397)
T ss_dssp CSSCEEEEETTCCTHHHHHHHHH-TCEE------------EEECBCTTSS-------------BCHHHHHHHHHHS---C
T ss_pred CCCeEEEECCcchhHHHHHHHHc-Ccee------------EEEeeCCCCc-------------CCHHHHHHHHhhc---C
Confidence 23578888888888754322222 2111 1111111111 1257888888642 4
Q ss_pred EEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc--ccccc---------cceecccCCCCchhchhh
Q 010250 272 IAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF--GRLGT---------MFGCDKYSIKPDLVSFAK 340 (514)
Q Consensus 272 ~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~--gr~G~---------~~~~~~~gv~pDiv~~sK 340 (514)
+++|+++++++.+|.+.+ +++|.++|++||+++|+||+|+++ +.+|. .+.... ++...+.+++|
T Consensus 172 ~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K 246 (397)
T 3f9t_A 172 VDGIIGIAGTTELGTIDN----IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHK 246 (397)
T ss_dssp CCEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTT
T ss_pred CeEEEEECCCCCCCCCCC----HHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEcccc
Confidence 567777777888888876 999999999999999999999864 33332 222333 55445557789
Q ss_pred hhcCCcccceeEEeCHH-HHHHhhhccCCCCc----ccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhh
Q 010250 341 ALSSAYMPIGAILVSPE-VSEVIHSQSNTLGS----FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV 415 (514)
Q Consensus 341 ~l~gG~~pig~v~~~~~-i~~~l~~~~~~~~~----~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L 415 (514)
.+++| .++|+++++++ +.+.+......... ...+.+.+.+++++.++++.+....-++..++++++++++.+.|
T Consensus 247 ~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L 325 (397)
T 3f9t_A 247 MGHCP-IPSGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKL 325 (397)
T ss_dssp TTCCC-SSCEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCC-CCceEEEEeCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88776 69999988655 44444221110000 00123334466677777666654333567788889999999999
Q ss_pred hhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--CEEEEeCCCCCCHHHHHHHH
Q 010250 416 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIMMSPPFIMSPEEVDELI 493 (514)
Q Consensus 416 ~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--~~iRi~p~~~~t~e~id~~~ 493 (514)
+++ ....+.. ..+.++.+.+.+ ...+.+.|.++||++.++. +.+||+++..+|++++++++
T Consensus 326 ~~~-g~~~~~~--~~~~~~~~~~~~--------------~~~~~~~l~~~gi~v~~~~~~~~~Ri~~~~~~~~e~i~~~~ 388 (397)
T 3f9t_A 326 KEN-NFKPVIE--PILNIVAIEDED--------------YKEVCKKLRDRGIYVSVCNCVKALRIVVMPHIKREHIDNFI 388 (397)
T ss_dssp HHT-TCCBSSC--CSSSEEEEECTT--------------HHHHHHHHHHTTCBCEECSSSSEEEEECCTTCCHHHHHHHH
T ss_pred HHC-CCEEEcC--CCccEEEEEeCC--------------HHHHHHHHHhCCeEEeccCCCCEEEEEEcCCCCHHHHHHHH
Confidence 887 4333322 334555555432 3458889999999998875 68999999889999999999
Q ss_pred HHHHHHHH
Q 010250 494 SKYGKALK 501 (514)
Q Consensus 494 ~~l~~~l~ 501 (514)
++|+++++
T Consensus 389 ~~l~~~l~ 396 (397)
T 3f9t_A 389 EILNSIKR 396 (397)
T ss_dssp HHHHHHC-
T ss_pred HHHHHhhC
Confidence 99998764
No 90
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.94 E-value=3.9e-26 Score=232.86 Aligned_cols=299 Identities=18% Similarity=0.187 Sum_probs=210.8
Q ss_pred chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCC
Q 010250 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK 223 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~ 223 (514)
....++.+.+++++...+.+++++++||++|++.+++.+. .++++|++.+++|++........ |....
T Consensus 63 ~g~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~--------~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~--- 130 (375)
T 3op7_A 63 EGSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLI--------EPGDHVISLYPTYQQLYDIPKSL-GAEVD--- 130 (375)
T ss_dssp TCCHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHC--------CTTCEEEEEESSCTHHHHHHHHT-TCEEE---
T ss_pred CChHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhc--------CCCCEEEEeCCCchhHHHHHHHc-CCEEE---
Confidence 3357899999998744466899999999999999998763 34578999999999865332222 21110
Q ss_pred CCCCCCcccccCCC--CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250 224 FDLPAPFVLHTDCP--HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 301 (514)
Q Consensus 224 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~ 301 (514)
.++.+ ..|. .++++|++.+. +++++|+++++++++|.+. +++++++|.++|
T Consensus 131 ---------~v~~~~~~~~~-------------~d~~~l~~~l~----~~~~~v~~~~~~nptG~~~-~~~~l~~i~~la 183 (375)
T 3op7_A 131 ---------LWQIEEENGWL-------------PDLEKLRQLIR----PTTKMICINNANNPTGAVM-DRTYLEELVEIA 183 (375)
T ss_dssp ---------EEEEEGGGTTE-------------ECHHHHHHHCC----TTCCEEEEESSCTTTCCCC-CHHHHHHHHHHH
T ss_pred ---------EEeccccCCCC-------------CCHHHHHHhhc----cCCeEEEEcCCCCCCCCCC-CHHHHHHHHHHH
Confidence 01100 0000 01467777664 3567888888888888765 678899999999
Q ss_pred HhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCc
Q 010250 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 381 (514)
Q Consensus 302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~ 381 (514)
++||+++|+||+|+++++.+.....+.++..+++.++||.++.+++++|++++++++++.+.. ..+..+++.+
T Consensus 184 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~~~~~~-------~~~~~~~~~~ 256 (375)
T 3op7_A 184 SEVGAYILSDEVYRSFSELDVPSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAANHQVTDILRD-------YRDYTMICAG 256 (375)
T ss_dssp HTTTCEEEEECCSCCCSSSCCCCHHHHCTTEEEEEESSSSSSCGGGCCEEEECCHHHHHHHTT-------TGGGTTSCCC
T ss_pred HHcCCEEEEEcccccccccCCCchhhhcCCEEEEeEChhhcCCcccceEEEEeCHHHHHHHHH-------HHhhhccCCC
Confidence 999999999999998876643333455666677778999997333899999999999998863 2445678889
Q ss_pred HHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHH
Q 010250 382 PVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYF 458 (514)
Q Consensus 382 pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~ 458 (514)
+++++++.++++..++ ++..++++++.+.+.+.|++. +.+..+... |.+..+.+.... ....+
T Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 322 (375)
T 3op7_A 257 VFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEEE---PLVSYIRPAVVSTSFVKIAVDM-----------PMEDF 322 (375)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHC---TTEEECCCSSSSCEEEEECCSS-----------CHHHH
T ss_pred cHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhhC---CCceEecCCCeEEEeEEcCCCC-----------CHHHH
Confidence 9999999888875432 234555677777777777664 333333333 334555554321 13456
Q ss_pred HHHH-HHCCcEEEeeC-----CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 459 GAQC-EKHGMLVRVSG-----DNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 459 ~~~l-~~~Gv~~~~~g-----~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
...+ .++||.+.++. +.+|++ +..++++|++++++|+++++++.
T Consensus 323 ~~~ll~~~gi~v~~g~~~~~~~~iRi~--~~~~~~~i~~~l~~l~~~l~~~~ 372 (375)
T 3op7_A 323 CLQLLQEHGVLLVPGNRFERDGYVRLG--FACEQETLIKGLEKLSQFLRRFD 372 (375)
T ss_dssp HHHHHHHHCEECEEGGGGTCTTEEEEC--CCSCHHHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHhCCEEEeChhhhCCCCeEEEE--ecCCHHHHHHHHHHHHHHHHHHh
Confidence 6666 58899998753 679999 56777999999999999987653
No 91
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.94 E-value=1.2e-25 Score=232.34 Aligned_cols=348 Identities=12% Similarity=0.104 Sum_probs=230.1
Q ss_pred CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-c-c--cccc-CCchHHHHHHHHHHhcCcCCCCeEEEeCCh
Q 010250 97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-H-S--FWNR-TTKPSLDLAKELLEMFTASKMAKVFFTNSG 171 (514)
Q Consensus 97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~-~--~~~~-~~~~~~ela~~L~~~~~~~~~~~v~~~~sG 171 (514)
.+|+.+++|.++.. ++.+|+|.+++.+++++.... + . .++. ..+...++.+.|+++++..+.+++++++||
T Consensus 24 ~~g~~~i~l~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~ 99 (420)
T 1t3i_A 24 INGHPLVYLDNAAT----SQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNA 99 (420)
T ss_dssp ETTEECEECBTTTC----CCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSH
T ss_pred cCCCceEEecCCcc----CCCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCCh
Confidence 36788888876632 478999999999998763211 1 0 0110 134567889999999853245789999999
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccce--e-eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCC
Q 010250 172 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTL--I-AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET 248 (514)
Q Consensus 172 seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~--~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (514)
++|++.+++.++... . .++++|++.+++||+... . .....|... ..++.+..+.
T Consensus 100 t~a~~~~~~~~~~~~---~-~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~------- 156 (420)
T 1t3i_A 100 TEAINLVAYSWGMNN---L-KAGDEIITTVMEHHSNLVPWQMVAAKTGAVL------------KFVQLDEQES------- 156 (420)
T ss_dssp HHHHHHHHHHTHHHH---C-CTTCEEEEETTCCGGGTHHHHHHHHHHCCEE------------EEECBCTTSS-------
T ss_pred HHHHHHHHHHhhhcc---c-CCCCEEEECcchhHHHHHHHHHHHHhcCcEE------------EEeccCCCCC-------
Confidence 999999999873210 1 234789999999999531 1 111112111 1111111111
Q ss_pred hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecc
Q 010250 249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDK 328 (514)
Q Consensus 249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~ 328 (514)
.++++|++.+. +++++|+++++++.+|.+.+ +++|.++|++||+++|+||+|+ +|... +....
T Consensus 157 ------~d~~~l~~~l~----~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~~~~~--~~~~~ 219 (420)
T 1t3i_A 157 ------FDLEHFKTLLS----EKTKLVTVVHISNTLGCVNP----AEEIAQLAHQAGAKVLVDACQS-APHYP--LDVQL 219 (420)
T ss_dssp ------BCHHHHHHHCC----TTEEEEEEESBCTTTCBBCC----HHHHHHHHHHTTCEEEEECTTT-TTTSC--CCHHH
T ss_pred ------cCHHHHHHhhC----CCceEEEEeCCcccccCcCC----HHHHHHHHHHcCCEEEEEhhhc-cCCcc--Cchhh
Confidence 11466776664 46889999999999998887 9999999999999999999997 44331 12222
Q ss_pred cCCCCchhch--hhhhcCCcccceeEEeCHHHHHHhhhccCCCCc-------------ccccCCCCCcHHHHHHHHH-HH
Q 010250 329 YSIKPDLVSF--AKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS-------------FSHGFTYSGHPVSCAVAIE-AL 392 (514)
Q Consensus 329 ~gv~pDiv~~--sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~-------------~~~~~t~~~~pl~~aaa~a-al 392 (514)
+ .+|++++ +|.++. .++|++++++++++.+......... .....+.+.+++.++++++ ++
T Consensus 220 ~--~~di~~~s~sK~~~~--~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al 295 (420)
T 1t3i_A 220 I--DCDWLVASGHKMCAP--TGIGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAV 295 (420)
T ss_dssp H--TCSEEEEEGGGTTSC--TTCEEEEECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHH
T ss_pred c--CCCEEEEehhhhcCC--CceEEEEEchHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHH
Confidence 3 3788765 495543 3489999999998887642110000 0011233456666666655 77
Q ss_pred HHHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEEE---eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250 393 KIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR---GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 466 (514)
Q Consensus 393 ~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~---g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 466 (514)
+.+.+ +++.++.+++.+++.+.|+++....+..... +.|.++.+.+... ....+.+.|.++|
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~g 363 (420)
T 1t3i_A 296 DYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGL------------HASDVATMVDQDG 363 (420)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETTB------------CHHHHHHHHHTTT
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEEEECCC------------CHHHHHHHHHHCC
Confidence 87765 4567888888999999988752222211111 2477888876421 1345778899999
Q ss_pred cEEEee-------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 467 MLVRVS-------------GDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 467 v~~~~~-------------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
|.+.++ .+.+|++++..+|++|+++++++|+++++.+.
T Consensus 364 i~v~~~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~~ 414 (420)
T 1t3i_A 364 IAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRFFS 414 (420)
T ss_dssp EECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred eEEeeccccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 999876 35799999988999999999999999987654
No 92
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.94 E-value=2.7e-26 Score=234.84 Aligned_cols=337 Identities=14% Similarity=0.097 Sum_probs=228.0
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcccc----ccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS----FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE 173 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~----~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse 173 (514)
++..|+|.. ..|+.+|+|++|+.+++........ .+....+...++.+.|+++++ .+.+++++++||++
T Consensus 15 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g-~~~~~v~~~~g~t~ 87 (390)
T 1elu_A 15 ANKTYFNFG------GQGILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFN-VDPNTITITDNVTT 87 (390)
T ss_dssp TTSEECCTT------TCCCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTT-SCGGGEEEESSHHH
T ss_pred CCeEEecCC------ccCCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcC-CCHHHEEEeCChHH
Confidence 456677742 3678899999999999875321110 111112556789999999984 34568999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCC
Q 010250 174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGET 248 (514)
Q Consensus 174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 248 (514)
|++.+++.++ . .++++|++.+++||+..... ....|... ..++.+ ..+.
T Consensus 88 a~~~~~~~~~------~-~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~~~------- 141 (390)
T 1elu_A 88 GCDIVLWGLD------W-HQGDEILLTDCEHPGIIAIVQAIAARFGITY------------RFFPVAATLNQG------- 141 (390)
T ss_dssp HHHHHHHHSC------C-CTTCEEEEETTCCHHHHHHHHHHHHHHCCEE------------EEECCGGGSSSS-------
T ss_pred HHHHHHhCCC------C-CCCCEEEEecCcccHHHHHHHHHHHHhCcEE------------EEEcCCCCCCcc-------
Confidence 9999998762 1 33578999999999865321 11112111 111111 0110
Q ss_pred hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH----hcCCEEEEechhcCcccccccc
Q 010250 249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK----KYDILFIADEVICAFGRLGTMF 324 (514)
Q Consensus 249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~----~~gillI~DEv~tG~gr~G~~~ 324 (514)
.++++|++.+. +++++|+++++++++|.+.+ +++|.++|+ +||+++|+||+|+ +|..+
T Consensus 142 ------~d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~~~~~li~Dea~~-~g~~~--- 203 (390)
T 1elu_A 142 ------DAAAVLANHLG----PKTRLVILSHLLWNTGQVLP----LAEIMAVCRRHQGNYPVRVLVDGAQS-AGSLP--- 203 (390)
T ss_dssp ------CHHHHHHTTCC----TTEEEEEEESBCTTTCCBCC----HHHHHHHHHHCCSSSCCEEEEECTTT-BTTBC---
T ss_pred ------chHHHHHHhcC----CCceEEEEeccccCCceecC----HHHHHHHHhhhhhhcCcEEEEEcccc-cCCcC---
Confidence 12455655553 46889999999999998887 999999999 9999999999997 65442
Q ss_pred eecccCCCCchhc--hhhhhcCCcccceeEEeCHHHHHHhhhccCCCCc---------c------cccCCCCCcHHHHHH
Q 010250 325 GCDKYSIKPDLVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS---------F------SHGFTYSGHPVSCAV 387 (514)
Q Consensus 325 ~~~~~gv~pDiv~--~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~---------~------~~~~t~~~~pl~~aa 387 (514)
.+.....+|+++ ++|.+.|| .++|++++++++++.+.......+. + ....+.+.+++++++
T Consensus 204 -~~~~~~~~d~~~~s~~K~~~~~-~g~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 281 (390)
T 1elu_A 204 -LDFSRLEVDYYAFTGHKWFAGP-AGVGGLYIHGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAG 281 (390)
T ss_dssp -CCTTTSCCSEEEEESSSTTCCC-TTCEEEEECTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHH
T ss_pred -CChhhcCCCEEEccccccccCC-CceEEEEECHHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHH
Confidence 122234578876 88977776 6899999999988776532100000 0 011123457788888
Q ss_pred HHHHHHHHhhcc----HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH
Q 010250 388 AIEALKIYKERN----IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE 463 (514)
Q Consensus 388 a~aal~~~~~~~----~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 463 (514)
+.++++.+.+.+ +.++++++++++.+.|+++.+..+....++.|.++.+.+.... ....+.+.|.
T Consensus 282 ~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~ 350 (390)
T 1elu_A 282 LLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTVDSPL-----------GHRAIVQKLE 350 (390)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEECSSS-----------CHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEEEEcCCCC-----------CHHHHHHHHH
Confidence 888888776533 5778888888998888875222111111356778888774211 1456788899
Q ss_pred HCCcEEEeeC--CEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250 464 KHGMLVRVSG--DNIMMSPPFIMSPEEVDELISKYGK 498 (514)
Q Consensus 464 ~~Gv~~~~~g--~~iRi~p~~~~t~e~id~~~~~l~~ 498 (514)
++||.+.++. +.|||+++..+|++|+++++++|++
T Consensus 351 ~~gi~v~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~ 387 (390)
T 1elu_A 351 EQRIYLRTIADPDCIRACCHYITDEEEINHLLARLAD 387 (390)
T ss_dssp HTTEECEEETTTTEEEEECCTTCCHHHHHHHHHHHTT
T ss_pred HCCEEEEecCCCCeEEEecccCCCHHHHHHHHHHHHh
Confidence 9999999875 6899999999999999999999875
No 93
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.94 E-value=4e-26 Score=237.40 Aligned_cols=346 Identities=10% Similarity=0.072 Sum_probs=226.9
Q ss_pred CEEEEccCCcccccCCCCCHHH--HHHHHHHHhc-CCccccccccCCchHHHHHHHHHHhc----CcCCCCe---EEEeC
Q 010250 100 KKYLDSLAGLWCTALGGSEPRL--VAAATAQLNT-LPFYHSFWNRTTKPSLDLAKELLEMF----TASKMAK---VFFTN 169 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v--~~A~~~~l~~-~~~~~~~~~~~~~~~~ela~~L~~~~----~~~~~~~---v~~~~ 169 (514)
+.++||.+|... .+|+ +|.+ ++++.+++.. ....+ . ......++.+.|++++ .+.+.++ +++++
T Consensus 47 ~~~i~l~~g~~~-~~~~-~~~~~~~~a~~~~~~~~~~~~y---~-~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~ 120 (430)
T 2x5f_A 47 STTYNATIGMAT-NKDG-KMFASSLDAMFNDLTPDEIFPY---A-PPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTN 120 (430)
T ss_dssp TCSEECCCSSCE-ETTE-ECCCHHHHTTBSSCCGGGTSSC---C-CTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEES
T ss_pred CCcEEeeeeecc-CCCC-chhhHHHHHHHHhcCccccccc---C-CCCCCHHHHHHHHHHHhccCcccCCCccceEEEcC
Confidence 468999888643 5885 6766 7777766643 11111 1 1112456666666665 1234567 99999
Q ss_pred ChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC-cccCCCCCCC
Q 010250 170 SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGET 248 (514)
Q Consensus 170 sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 248 (514)
||++|++.+++.+. ..+++|++.+++||+.........|.... .++... .|.
T Consensus 121 g~~~al~~~~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~------------~~~~~~~~~~------- 173 (430)
T 2x5f_A 121 ALTHGLSLVGDLFV--------NQDDTILLPEHNWGNYKLVFNTRNGANLQ------------TYPIFDKDGH------- 173 (430)
T ss_dssp HHHHHHHHHHHHHC--------CTTCEEEEESSCCTHHHHHHTTTTCCEEE------------EECCBCTTSC-------
T ss_pred CchHHHHHHHHHHh--------CCCCEEEEcCCcCccHHHHHHHhcCCeEE------------EEeccCccCC-------
Confidence 99999999998763 23478999999999975433320121111 111110 011
Q ss_pred hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh-----cCCEEEEechhcCccccccc
Q 010250 249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK-----YDILFIADEVICAFGRLGTM 323 (514)
Q Consensus 249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~-----~gillI~DEv~tG~gr~G~~ 323 (514)
.++++|++.+.....+..++++++| ++++|.+ .+.+++++|.++|++ ||+++|+||+|++|.+.|..
T Consensus 174 ------~d~~~l~~~l~~~~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~ 245 (430)
T 2x5f_A 174 ------YTTDSLVEALQSYNKDKVIMILNYP-NNPTGYT-PTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVY 245 (430)
T ss_dssp ------BCSHHHHHHHHHCCSSEEEEEECSS-CTTTCCC-CCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSC
T ss_pred ------cCHHHHHHHHHhcCCCCEEEEEcCC-CCCCCCc-CCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCccc
Confidence 0147788887653323344455666 7777865 567899999999999 99999999999998776652
Q ss_pred c-ee--cccCCCCc------hhchhhhhcCCcccceeEEe---CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHH
Q 010250 324 F-GC--DKYSIKPD------LVSFAKALSSAYMPIGAILV---SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEA 391 (514)
Q Consensus 324 ~-~~--~~~gv~pD------iv~~sK~l~gG~~pig~v~~---~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aa 391 (514)
+ .. ...+..++ +.++||.++.+++++|++++ ++++++.+.... ....++.+++.++++++++.++
T Consensus 246 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~a~~~~ 322 (430)
T 2x5f_A 246 TQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKV---KGLIRSNISSGPLPTQSAVKHV 322 (430)
T ss_dssp CSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHHHHHHHHH---HHHHHTTTSSCCHHHHHHHHHH
T ss_pred chHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHHHHHHHHH---hhhhhcccCCCChHHHHHHHHH
Confidence 2 21 22233444 33789999743389999999 999988886421 0011225778899999999999
Q ss_pred HH-H---Hhh-ccHHHHHHHHHHHHHhhhhhcc-CCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH
Q 010250 392 LK-I---YKE-RNIVEQVNKIAPKFQDGVKAFS-DSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK 464 (514)
Q Consensus 392 l~-~---~~~-~~~~~~~~~~~~~l~~~L~~l~-~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 464 (514)
|+ . .++ ++..++++++.+++.+.|++.. ..+ +....+. |.++++.+. .. ....+.+.|.+
T Consensus 323 l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g-~~~~~~~~g~~~~~~~~-~~-----------~~~~~~~~l~~ 389 (430)
T 2x5f_A 323 LKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSH-WQAYDFNSGYFMAIKVH-DV-----------DPEALRKHLID 389 (430)
T ss_dssp HHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTT-EEECCCCBSSEEEEEES-SS-----------CHHHHHHHHHH
T ss_pred HccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC-ceeeCCCceEEEEeCCC-CC-----------CHHHHHHHHHH
Confidence 98 3 222 2367777888888888887321 122 2222333 455778775 11 14457788887
Q ss_pred -CCcEEEee-CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 465 -HGMLVRVS-GDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 465 -~Gv~~~~~-g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+||++.++ .+.+||+++. .++++|++++++|+++++++
T Consensus 390 ~~gi~v~~g~~~~iRis~~~-~~~e~i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 390 KYSIGVIALNATDIRIAFSC-VEKDDIPHVFDSIAKAIDDL 429 (430)
T ss_dssp HHCEECEECSSSEEEEEGGG-SCGGGHHHHHHHHHHHHHHH
T ss_pred hCCEEEecCCCCeEEEEEec-CCHHHHHHHHHHHHHHHHhc
Confidence 99999986 4579999875 59999999999999998654
No 94
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.94 E-value=1e-25 Score=230.59 Aligned_cols=337 Identities=13% Similarity=0.098 Sum_probs=222.9
Q ss_pred EEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChh
Q 010250 93 YVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGS 172 (514)
Q Consensus 93 ~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGs 172 (514)
.++|++++.+.++...++..+++|..++..+.+ .+++++++++++. . +.++|++||+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~---------------------~~~~~~l~~~~~~-~-~~v~~~~sgt 61 (379)
T 3ke3_A 5 LRQDIDPNGLLEYSVVYTDRALNHMSKAFQEVM---------------------NDLLSNLKTVYNA-E-AAVIIPGSGT 61 (379)
T ss_dssp ---CCSTTSCCCCCSSCCTTSCCTTSHHHHHHH---------------------HHHHHHHHHHHTC-S-EEEEEESCHH
T ss_pred hhccCCHHHHHHHHHhccCCCCCCCCHHHHHHH---------------------HHHHHHHHHHhCC-C-CEEEEcCChh
Confidence 578899999999987776667888877655332 3455667777643 2 6789999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeec-CCCccccCCCCCCCCcccccCCCC----cccCCCCCC
Q 010250 173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL-SGLPALHQKFDLPAPFVLHTDCPH----YWRYAHPGE 247 (514)
Q Consensus 173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 247 (514)
+|++++++.+ .++++||+++++|||.+...+.. .+.+. .+..++.+. .|+.+.
T Consensus 62 ~a~~~~~~~~---------~~gd~vi~~~~~~~~~~~~~~~~~~g~~~----------~~~~~~~~~~g~~~~~~~~--- 119 (379)
T 3ke3_A 62 YGMEAVARQL---------TIDEDCLIIRNGWFSYRWTQILEKGKFAK----------SSTVLTAERTEDTEAPKPF--- 119 (379)
T ss_dssp HHHHHHHHHH---------CTTCEEEEEECSHHHHHHHHHHHHHCCSS----------EEEEEECEESSCCSSCCCE---
T ss_pred HHHHHHHHhC---------CCCCeEEEEeCCchhHHHHHHHHHhCCCC----------ceEEEeccccccccccCCC---
Confidence 9999988654 24578999999999975433221 11100 001111110 011000
Q ss_pred ChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceec
Q 010250 248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCD 327 (514)
Q Consensus 248 ~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~ 327 (514)
...+++++++++.+. ++++|++..+++.+|.+. +.+++++|+++|++||+++|+||+|+ | +..+..+
T Consensus 120 -----~~~d~~~l~~~i~~~---~~~~v~~~~~~~~~G~~~-~~~~l~~i~~~~~~~~~~li~D~~~~--g--~~~~~~~ 186 (379)
T 3ke3_A 120 -----APVDIETAVAKIKED---KSAIVYAPHVETSSGIIL-SEEYIKALSEAVHSVGGLLVIDCIAS--G--CVWLDMK 186 (379)
T ss_dssp -----ECCCHHHHHHHHHHH---TCSEEEEESEETTTTEEC-CHHHHHHHHHHHHHTTCEEEEECTTC--T--TCCCCHH
T ss_pred -----CCCCHHHHHHHHhhc---CCcEEEEEeecCCCceeC-CHHHHHHHHHHHHHcCCEEEEEeccc--C--Ccccccc
Confidence 001257788887542 345677777777778665 57899999999999999999999997 3 3355566
Q ss_pred ccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCccc--------------cc---CCCCCcHHHHHHHHH
Q 010250 328 KYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS--------------HG---FTYSGHPVSCAVAIE 390 (514)
Q Consensus 328 ~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~--------------~~---~t~~~~pl~~aaa~a 390 (514)
.++++..+.+++|+|+|+ .++|++++++++++.+..... ..+. .+ ++++.++.++++..+
T Consensus 187 ~~~~d~~~~s~~K~l~~~-~g~g~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~a 263 (379)
T 3ke3_A 187 ELGIDVLISAPQKGWSST-PCAGLVMLSAAAIKKVESTES--NCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRD 263 (379)
T ss_dssp HHTCSEEEECTTTTTCSC-CCEEEEEECHHHHHHHHTCCC--SCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHH
T ss_pred ccCCCEEEecchhhcCCC-CceEEEEECHHHHHhhhcCCC--CceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHH
Confidence 667655555667999876 578999999999988864211 1111 11 234667888888889
Q ss_pred HHHHHhhc---cHHHHHHHHHHHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250 391 ALKIYKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 466 (514)
Q Consensus 391 al~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 466 (514)
+|+.+.++ ++.++.+++.+++++.|+++ ...+.... ...+.+..+.+.+. ...+...|.++|
T Consensus 264 al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~~~~~i~~~~~~~~-------------~~~~~~~L~~~G 329 (379)
T 3ke3_A 264 AILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESVAAEGFEAPGVVVSYTERD-------------DMHKGSAFAEAG 329 (379)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBCTTCBCSSEEEEECSCH-------------HHHSSHHHHHTT
T ss_pred HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCCccccCceEEEEccCCc-------------chHHHHHHHHCC
Confidence 99988764 56788888999999999876 22222110 01122233322110 111256788999
Q ss_pred cEEEee----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 467 MLVRVS----------GDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 467 v~~~~~----------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
|++.++ ++.||++++..+|++||++++++|+++++++.
T Consensus 330 i~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 330 LQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp CCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred eEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 998764 46799999999999999999999999987664
No 95
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.94 E-value=3.3e-25 Score=229.62 Aligned_cols=361 Identities=13% Similarity=0.059 Sum_probs=226.4
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC--ccccccccCCchHHHHHHHHHHhcCc-CCC-CeEEEeCChhHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP--FYHSFWNRTTKPSLDLAKELLEMFTA-SKM-AKVFFTNSGSEAN 175 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~--~~~~~~~~~~~~~~ela~~L~~~~~~-~~~-~~v~~~~sGseA~ 175 (514)
..+|||..|. ..++ .+|.|++++.+++.... ..+....+..+....+++.+.+.++. ... +++++++||++|+
T Consensus 28 ~~~i~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~ 104 (422)
T 3fvs_A 28 HDVVNLGQGF--PDFP-PPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGAL 104 (422)
T ss_dssp SCCEECCCSS--CSSC-CCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHH
T ss_pred CCceEeCCCC--CCCC-CCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHH
Confidence 4679998875 3343 68999999999987632 11111111233444555555544321 223 5899999999999
Q ss_pred HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250 176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255 (514)
Q Consensus 176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (514)
+.+++.+. .++++|++.+++||+........+. ..............-..+....|+ .
T Consensus 105 ~~~~~~~~--------~~gd~vl~~~p~~~~~~~~~~~~g~-~~~~~~~~~~~~~~G~~~~~~~~~-------------~ 162 (422)
T 3fvs_A 105 FTAFQALV--------DEGDEVIIIEPFFDCYEPMTMMAGG-RPVFVSLKPGPIQNGELGSSSNWQ-------------L 162 (422)
T ss_dssp HHHHHHHC--------CTTCEEEEEESCCTTHHHHHHHTTC-EEEEEECBCCCCCSSSCCBGGGSB-------------C
T ss_pred HHHHHHHc--------CCCCEEEEcCCCchhhHHHHHHcCC-EEEEEecccccccccccccccCCC-------------C
Confidence 99998773 3456899999999997543332221 111000000000000000000111 0
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eecccC----
Q 010250 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYS---- 330 (514)
Q Consensus 256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~g---- 330 (514)
++++|++.+. +++++|+++..++++|.+. +++.+++|.++|++||+++|+||+|++|.+.|... ....+.
T Consensus 163 d~~~l~~~~~----~~~~~v~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 237 (422)
T 3fvs_A 163 DPMELAGKFT----SRTKALVLNTPNNPLGKVF-SREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWE 237 (422)
T ss_dssp CHHHHHTTCC----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGG
T ss_pred CHHHHHhhcC----CCceEEEECCCCCCCCcCC-CHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccC
Confidence 1456665553 3677888888888888776 67889999999999999999999999988777522 222222
Q ss_pred CCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH-------hh--ccHH
Q 010250 331 IKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY-------KE--RNIV 401 (514)
Q Consensus 331 v~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~-------~~--~~~~ 401 (514)
...++.++||.++.+++++|++++++++++.+.. ..+..+++.++++++++.++|+.. ++ +++.
T Consensus 238 ~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 310 (422)
T 3fvs_A 238 RTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRT-------VHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFP 310 (422)
T ss_dssp GEEEEEEHHHHHTCGGGCCEEEECCHHHHHHHHH-------HHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHH
T ss_pred cEEEEecchhccCCccceEEEEEeCHHHHHHHHH-------HHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHH
Confidence 1233447899997333899999999999988863 234567888999999999988751 11 2356
Q ss_pred HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCC--CCCCCCCccchHHHHHHHHH-HCCcEEEee------
Q 010250 402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKS--PNEPFPPEWGIGAYFGAQCE-KHGMLVRVS------ 472 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~------ 472 (514)
++++++.+++.+.|+++ ++.......|.++++++..... ...+..........+...++ ++||++.++
T Consensus 311 ~~~~~~~~~l~~~L~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~ 387 (422)
T 3fvs_A 311 QAMQRCRDHMIRSLQSV---GLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSV 387 (422)
T ss_dssp HHHHHHHHHHHHHHHTT---TCEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCH
T ss_pred HHHHHHHHHHHHHHHHc---CCeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCC
Confidence 67777888888888765 2222233456677777653110 00000000011334566554 579998863
Q ss_pred ------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 473 ------GDNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 473 ------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
.+.+||+ +..|+++|++++++|++++++
T Consensus 388 ~~~~~~~~~iRis--~~~~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 388 PHQKHFDHYIRFC--FVKDEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp HHHTTSCSEEEEE--CCCCHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCCCeEEEE--ecCCHHHHHHHHHHHHHHHhh
Confidence 2569999 566999999999999998754
No 96
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.94 E-value=4.2e-25 Score=223.16 Aligned_cols=326 Identities=10% Similarity=0.036 Sum_probs=209.7
Q ss_pred EeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEE
Q 010250 87 EKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVF 166 (514)
Q Consensus 87 ~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~ 166 (514)
.+++|.+++|.+|+++|||.++. ++++ .+|+|.+++.+++.....+ +.....++.+.|+++++ .+.++++
T Consensus 2 ~~~~g~~~~~~~g~~~id~~~~~--~~~~-~~~~v~~a~~~~~~~~~~y------~~~~~~~lr~~la~~~~-~~~~~i~ 71 (350)
T 3fkd_A 2 IFGHGDEGITPLSSEIVNFSTTV--WTDG-DKDHLEKHLVENLNCIRHY------PEPDAGTLRQMLAKRNS-VDNNAIL 71 (350)
T ss_dssp --------------CCEECSCCS--CCCS-CCHHHHHHHHHTGGGGGSC------CCTTCHHHHHHHHHHTT-CCGGGEE
T ss_pred cccccchHhhhccccEEEccCCC--CCCC-CCHHHHHHHHHhHhHHhcC------CCCcHHHHHHHHHHHhC-cCHHHEE
Confidence 46889999999999999999885 4566 7899999999887443222 22223688999999874 4557999
Q ss_pred EeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC-CCcccCCCC
Q 010250 167 FTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC-PHYWRYAHP 245 (514)
Q Consensus 167 ~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 245 (514)
+++||++|++.+++.+ . +++|++.+++|++........+. .. ..++. +..
T Consensus 72 ~t~g~~~al~~~~~~l---------~-gd~Vi~~~p~~~~~~~~~~~~g~-~~------------~~v~~~~~~------ 122 (350)
T 3fkd_A 72 VTNGPTAAFYQIAQAF---------R-GSRSLIAIPSFAEYEDACRMYEH-EV------------CFYPSNEDI------ 122 (350)
T ss_dssp EESHHHHHHHHHHHHT---------T-TCEEEEEESCCHHHHHHHHHTTC-EE------------EEEETTSCG------
T ss_pred EcCCHHHHHHHHHHHH---------C-CCEEEEeCCCcHHHHHHHHHcCC-eE------------EEEecCCcc------
Confidence 9999999999999876 2 56899999999987533332221 11 11111 000
Q ss_pred CCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC-CEEEEechhcCcccccccc
Q 010250 246 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD-ILFIADEVICAFGRLGTMF 324 (514)
Q Consensus 246 ~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~g-illI~DEv~tG~gr~G~~~ 324 (514)
+ .+ ..+++.+|+++..++++|.+.+ ++++.++++.++ .++|+||+|++|+..+...
T Consensus 123 ----~--------~~-------~~~~~~~v~i~~p~nptG~~~~----~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~ 179 (350)
T 3fkd_A 123 ----G--------EA-------DFSNMDFCWLCNPNNPDGRLLQ----RTEILRLLNDHPDTTFVLDQSYVSFTTEEVIR 179 (350)
T ss_dssp ----G--------GS-------CCTTCSEEEEESSCTTTCCCCC----HHHHHHHHHHCTTSEEEEECTTTTSCSSCCCC
T ss_pred ----c--------cC-------ccCCCCEEEEeCCCCCcCCCCC----HHHHHHHHHhCCCCEEEEECchhhhccCcchh
Confidence 0 00 0023445666666777887776 445555555544 5999999999887766432
Q ss_pred e--ecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--hccH
Q 010250 325 G--CDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNI 400 (514)
Q Consensus 325 ~--~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~~~~ 400 (514)
. .+.++....+.++||.++.+++++|++++++++++.+... ..+++.++++++++.++|+... .+.+
T Consensus 180 ~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 250 (350)
T 3fkd_A 180 PADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAF---------STPWAVNALAIEAAKFILIHPAQFTLPI 250 (350)
T ss_dssp GGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTT---------CCTTCSCHHHHHHHHHHHHCTTTTCCCH
T ss_pred hHHhhcCCCEEEEecCchhccCcchheEeEEeCHHHHHHHHHh---------CCCCCCCHHHHHHHHHHHhCHHHHHHHH
Confidence 2 1112211223378999983338999999999999988742 2356788999999998888543 1233
Q ss_pred HHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee-------
Q 010250 401 VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS------- 472 (514)
Q Consensus 401 ~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~------- 472 (514)
.+ ..++.+++.+.|+++ +.+....+.|.++.+.+.... ...+.+.|.+ +||.+.++
T Consensus 251 ~~-~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~------------~~~l~~~L~~~~gi~v~~g~~f~~~~ 314 (350)
T 3fkd_A 251 RK-WQRNTVDFITALNRL---DGVEVHPSGTTFFLLRLKKGT------------AAELKKYMLEEYNMLIRDASNFRGLD 314 (350)
T ss_dssp HH-HHHHHHHHHHHHHHS---TTEEECCCSSSEEEEEESSSC------------HHHHHHHHHHTTCEECEECTTSTTCC
T ss_pred HH-HHHHHHHHHHHHhcC---CCcEECCCCCcEEEEECCCCC------------HHHHHHHHHHHCCEEEEeCccCCCCC
Confidence 33 347788888888765 333334556777777775421 4568888998 99999875
Q ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 473 GDNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 473 g~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
.+.|||+. .+++++++++++|++.+++
T Consensus 315 ~~~iRis~---~~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 315 ESYVRITT---QRPAQNQLFIKALETFLEK 341 (350)
T ss_dssp TTEEEEEC---CCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEEc---CCHHHHHHHHHHHHHHHHH
Confidence 35799994 4889999999988877653
No 97
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.94 E-value=3.9e-26 Score=235.98 Aligned_cols=348 Identities=9% Similarity=0.046 Sum_probs=221.8
Q ss_pred CCCEEEEccCCcccccCCC--CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC-----CCCeEEE--e
Q 010250 98 NGKKYLDSLAGLWCTALGG--SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS-----KMAKVFF--T 168 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh--~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~-----~~~~v~~--~ 168 (514)
+|+.++||.+|....+.|+ .+|.|.+|+.+++.+....+. + .+.....++.+.+++++... ..++|++ +
T Consensus 28 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~-y-~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t 105 (412)
T 1ajs_A 28 PDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHE-Y-LPILGLAEFRTCASRLALGDDSPALQEKRVGGVQS 105 (412)
T ss_dssp CCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCC-C-CCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEE
T ss_pred CCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccC-C-CCCCCCHHHHHHHHHHHhcCCCCccCCCcEEEEEC
Confidence 4778999999865455555 358999999988733111111 1 12333467888888877321 3578999 9
Q ss_pred CChhHHHHHHHHHHHHHHhhcCCCCc----cEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcccC
Q 010250 169 NSGSEANDTQVKLVWYYNNALGRPNK----KKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYWRY 242 (514)
Q Consensus 169 ~sGseA~~~Alk~a~~~~~~~~~~~~----~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 242 (514)
+||++|++.+++++..+. +++ ++|++.+++||+........+..... .++. ++.|.
T Consensus 106 ~gg~~a~~~~~~~~~~~~-----~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~------------~~~~~~~~~~~- 167 (412)
T 1ajs_A 106 LGGTGALRIGAEFLARWY-----NGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIR------------SYRYWDTEKRG- 167 (412)
T ss_dssp EHHHHHHHHHHHHHHHHS-----SSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEE------------EEECEETTTTE-
T ss_pred CCcHHHHHHHHHHHHHhC-----cCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeE------------EEeeecCCCCc-
Confidence 999999999988664331 221 68999999999976444333221011 1111 01111
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc-
Q 010250 243 AHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG- 321 (514)
Q Consensus 243 ~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G- 321 (514)
.++++|++.+.+..+ ++.++++...++.+|. .++.+++++|.++|++||+++|+||+|++|++.|
T Consensus 168 ------------~d~~~l~~~l~~~~~-~~~~v~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~ 233 (412)
T 1ajs_A 168 ------------LDLQGFLSDLENAPE-FSIFVLHACAHNPTGT-DPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNL 233 (412)
T ss_dssp ------------ECHHHHHHHHHHSCT-TCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCH
T ss_pred ------------cCHHHHHHHHHhCCC-CcEEEEECCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcc
Confidence 115778887765433 3445544444455565 4577999999999999999999999999998876
Q ss_pred --ccceecccCCCCc----hhchhhhhcCCcccceeEEe---CHHHHHHhhhccCCCCcccccCCCC-CcHHHHHHHHHH
Q 010250 322 --TMFGCDKYSIKPD----LVSFAKALSSAYMPIGAILV---SPEVSEVIHSQSNTLGSFSHGFTYS-GHPVSCAVAIEA 391 (514)
Q Consensus 322 --~~~~~~~~gv~pD----iv~~sK~l~gG~~pig~v~~---~~~i~~~l~~~~~~~~~~~~~~t~~-~~pl~~aaa~aa 391 (514)
..+.+..+...+| +.++||.++..++|+|++++ ++++++.+...- .. .+..++. .++++++++.++
T Consensus 234 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~a~~~~ 309 (412)
T 1ajs_A 234 EKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQM---QK-IVRVTWSNPPAQGARIVART 309 (412)
T ss_dssp HHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHH---HH-HHHTTTSSCCSHHHHHHHHH
T ss_pred cccchHHHHHhccCCcEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHH---HH-HHhcccCCCChHHHHHHHHH
Confidence 3333332221234 34789999873389999999 887544432100 01 1334555 488999999998
Q ss_pred HHHHh--------hccHHHHHHHHHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHH
Q 010250 392 LKIYK--------ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQC 462 (514)
Q Consensus 392 l~~~~--------~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 462 (514)
|+... -+++.++++++++++.+.|+++.....+..+... |.+..+.+. ...+...+
T Consensus 310 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l 374 (412)
T 1ajs_A 310 LSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLN---------------PKQVEYLI 374 (412)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCC---------------HHHHHHHH
T ss_pred HcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCCC---------------HHHHHHHH
Confidence 87542 1456788888999999999876200011111222 333333221 23344566
Q ss_pred HHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 463 EKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 463 ~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
.++||++.++ +|+++.. +|++++++++++|++++++
T Consensus 375 ~~~gv~v~~~---~Ris~~~-~~~~~i~~~~~~l~~~l~~ 410 (412)
T 1ajs_A 375 NQKHIYLLPS---GRINMCG-LTTKNLDYVATSIHEAVTK 410 (412)
T ss_dssp HTTCEECCTT---SEEEGGG-CCTTTHHHHHHHHHHHHHH
T ss_pred HhCCEEecCC---cEEEeee-CCHHHHHHHHHHHHHHHHh
Confidence 7899999863 6999653 5999999999999998864
No 98
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.94 E-value=5e-26 Score=238.04 Aligned_cols=351 Identities=9% Similarity=0.043 Sum_probs=227.3
Q ss_pred CcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcccccc-ccCCchHHHHHHHHHHhcC---cCCCCeEE
Q 010250 91 GSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFW-NRTTKPSLDLAKELLEMFT---ASKMAKVF 166 (514)
Q Consensus 91 G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~-~~~~~~~~ela~~L~~~~~---~~~~~~v~ 166 (514)
+.+..+.+|+++|||.+|. ..++ .+|+|++|+.+++++....+... ..+.....+|.+.+++++. +...++++
T Consensus 60 ~~~~~~~~~~~~i~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~g~~~~~~~i~ 136 (449)
T 3qgu_A 60 KAHQEKNPDAKIISLGIGD--TTEP-LPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIF 136 (449)
T ss_dssp HHHHHHCTTCCCEECSSCC--CCCC-CCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHHTTTTCCGGGEE
T ss_pred HHHHhhCCCCCEEEeeCCC--CCCC-CCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHHcCCCCCHHHEE
Confidence 3333334789999999884 3344 68999999999998532111111 1122345788888888862 23457999
Q ss_pred EeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCC
Q 010250 167 FTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPG 246 (514)
Q Consensus 167 ~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (514)
|++|+++++..+ .... .++++|++.+++|++........+....... .. ...+..++....
T Consensus 137 ~t~G~~~al~~~-~~l~--------~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~-~~--~~~~~~~~~~~~------- 197 (449)
T 3qgu_A 137 ISDGSKCDIARI-QMMF--------GSKPTVAVQDPSYPVYVDTSVMMGMTGDHNG-TG--FDGIEYMVCNPD------- 197 (449)
T ss_dssp EESCHHHHHHHH-HHHH--------CSSSCEEEEESCCTHHHHHHHHHTCSCCBCS-SS--BTTEEEEECCGG-------
T ss_pred EccCHHHHHHHH-HHHh--------CCCCEEEEcCCCChhHHHHHHHcCCcccccc-cc--cceeEEEecccc-------
Confidence 999999999988 3332 3457899999999998654444332211100 00 000111111110
Q ss_pred CChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-ce
Q 010250 247 ETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FG 325 (514)
Q Consensus 247 ~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~ 325 (514)
+.+ ..++++ . .++++|+++..++++|.+. +.+.+++|+++|++||+++|+||+|++|++.|.. ..
T Consensus 198 ---~~~----~~~~~~----~--~~~~~v~l~~p~NPtG~~~-~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~ 263 (449)
T 3qgu_A 198 ---NHF----FPDLSK----A--KRTDIIFFCSPNNPTGAAA-TRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKT 263 (449)
T ss_dssp ---GTT----CCCGGG----C--CCCSEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSS
T ss_pred ---cCC----cCChhH----c--CCCCEEEEeCCCCCCCCcC-CHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCC
Confidence 000 011111 1 2445666666677777654 6788999999999999999999999998777642 22
Q ss_pred eccc----CCCCchhchhhhhc-CCcccceeEEeCHHHHH--------HhhhccCCCCcccccCCCCCcHHHHHHHHHHH
Q 010250 326 CDKY----SIKPDLVSFAKALS-SAYMPIGAILVSPEVSE--------VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEAL 392 (514)
Q Consensus 326 ~~~~----gv~pDiv~~sK~l~-gG~~pig~v~~~~~i~~--------~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal 392 (514)
...+ ++..++.++||+++ .| +|+|++++++++++ .+.. .....+++.++++++++.++|
T Consensus 264 ~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l 335 (449)
T 3qgu_A 264 IYEIPGADEVAIETCSFSKYAGFTG-VRLGWTVVPKALKYANGEPVHADWNR-------VMTTCFNGASNIVQAGGLACL 335 (449)
T ss_dssp GGGSTTGGGTEEEEEECSGGGTCTT-CCCEEEECCTTCBCTTSCBHHHHHHH-------HHHHSCCCCCHHHHHHHHHHT
T ss_pred HhhccCCCCcEEEEecchhhcCCcc-ceeEEEecCHHHHhhhhhhHHHHHHH-------HhhcccCCCCHHHHHHHHHHH
Confidence 2222 22233557999998 45 89999999988765 2221 123345578899999999888
Q ss_pred HHHh---hccHHHHHHHHHHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-Cc
Q 010250 393 KIYK---ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GM 467 (514)
Q Consensus 393 ~~~~---~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv 467 (514)
+... .+++.++++++.+++++.|+++ ...+ ..+ .|.++++.+. .. ....+.+.|+++ ||
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~---~~~~~~~~~~~~~~-~~-----------~~~~~~~~l~~~~gI 399 (449)
T 3qgu_A 336 QPEGLKEMNAMIKFYKENAQILKTTFTEM-GFSV---YGGDDAPYIWVGFP-GK-----------PSWDVFAEILERCNI 399 (449)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCE---EESSSSSEEEEECT-TS-----------CHHHHHHHHHHHHCE
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCee---eCCCCeeEEEEECC-CC-----------CHHHHHHHHHHHCCE
Confidence 6521 2456788888999999999876 2222 223 3667777775 11 134577777775 99
Q ss_pred EEEee-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 468 LVRVS-------GDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 468 ~~~~~-------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
++.++ .+.|||+ +..++++|++++++|++++++-
T Consensus 400 ~v~pg~~f~~~~~~~iRis--~~~~~e~i~~~l~~l~~~~~~~ 440 (449)
T 3qgu_A 400 VTTPGSGYGPAGEGFVRAS--AFGSRENILEAVRRFKEAYGKR 440 (449)
T ss_dssp ECEEGGGGCGGGTTEEEEE--CCSCHHHHHHHHHHHHHHHC--
T ss_pred EEecchHhCCCCCCeEEEE--ecCCHHHHHHHHHHHHHHHHhc
Confidence 99864 2679999 6779999999999999988643
No 99
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.94 E-value=1.5e-25 Score=232.84 Aligned_cols=343 Identities=10% Similarity=0.077 Sum_probs=223.0
Q ss_pred EEEEccCCcccccCCCCCHHHHHHHHHHHhc---------CCccccccccCCchHHHHHHHHHHhcCc-------CCCCe
Q 010250 101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNT---------LPFYHSFWNRTTKPSLDLAKELLEMFTA-------SKMAK 164 (514)
Q Consensus 101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~---------~~~~~~~~~~~~~~~~ela~~L~~~~~~-------~~~~~ 164 (514)
.++||.++. +++| +|.+.+++.++... .... ..+. ......++.+.+++++.. .+.++
T Consensus 37 ~~i~l~~~~--~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~Y~-~~~g~~~lr~~la~~~~~~~g~~~~~~~~~ 110 (428)
T 1iay_A 37 GVIQMGLAE--NQLC--LDLIEDWIKRNPKGSICSEGIKSFKAI-ANFQ-DYHGLPEFRKAIAKFMEKTRGGRVRFDPER 110 (428)
T ss_dssp SBEECSSCC--CCSS--HHHHHHHHHHCTTSSTTC----CHHHH-HHCC-CTTCCHHHHHHHHHHHHHHTTTCSCCCTTS
T ss_pred ceeeecccc--chhh--HHHHHHHHHhccccccccccccccHhh-cCCC-CCCCcHHHHHHHHHHHHHhcCCCCCCChhh
Confidence 478887664 5666 47888888754310 0000 0111 111135666666666531 34678
Q ss_pred EEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccC
Q 010250 165 VFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRY 242 (514)
Q Consensus 165 v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 242 (514)
+++++||++|++.+++.+. ..+++|++.+++||+.........|... ..++.. ..|.
T Consensus 111 i~~~~G~~~ai~~~~~~~~--------~~gd~Vl~~~p~y~~~~~~~~~~~g~~~------------~~v~~~~~~~~~- 169 (428)
T 1iay_A 111 VVMAGGATGANETIIFCLA--------DPGDAFLVPSPYYPAFNRDLRWRTGVQL------------IPIHCESSNNFK- 169 (428)
T ss_dssp CEEEEHHHHHHHHHHHHHC--------CTTCEEEEESSCCTTHHHHTTTTTCCEE------------EEECCCTTTTTC-
T ss_pred EEEccChHHHHHHHHHHhC--------CCCCeEEEccCCCcchHHHHHHhcCCEE------------EEeecCCccCCc-
Confidence 9999999999999998773 2346899999999987543222223211 111111 0111
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250 243 AHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 320 (514)
Q Consensus 243 ~~~~~~~~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~ 320 (514)
.+++++++.+.+. ...++++|+++..++++|.+. +++++++|.++|++||+++|+||+|+++++.
T Consensus 170 ------------~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~ 236 (428)
T 1iay_A 170 ------------ITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTL-DKDTLKSVLSFTNQHNIHLVCDEIYAATVFD 236 (428)
T ss_dssp ------------CCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHTTTCEEEEECTTGGGCCS
T ss_pred ------------CCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcC-CHHHHHHHHHHHHHCCeEEEEeccccccccC
Confidence 0146777776542 223566666665567778764 7799999999999999999999999987666
Q ss_pred cccc-eeccc-------CCCCc----hhchhhhhcCCcccceeEEe-CHHHHHHhhhccCCCCcccccCCCCCcHHHHHH
Q 010250 321 GTMF-GCDKY-------SIKPD----LVSFAKALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV 387 (514)
Q Consensus 321 G~~~-~~~~~-------gv~pD----iv~~sK~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aa 387 (514)
|..+ ....+ ++.+| +.++||+++.+++|+|++++ ++++++.+... ..+++.+++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~a 307 (428)
T 1iay_A 237 TPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKM---------SSFGLVSTQTQYF 307 (428)
T ss_dssp SSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHH---------HTTSCCCHHHHHH
T ss_pred CCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHH---------HhcccCCHHHHHH
Confidence 5422 11111 23477 44789999733389999999 68888887631 2346678899988
Q ss_pred HHHHHHHHh---h--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHH
Q 010250 388 AIEALKIYK---E--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQ 461 (514)
Q Consensus 388 a~aal~~~~---~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (514)
+.++|+... + +++.++++++++++.+.|+++ ...+ +++ .|.++++++...... ........+.+.
T Consensus 308 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~---~~~~~g~~~~~~~~~~~~~-----~~~~~~~~l~~~ 378 (428)
T 1iay_A 308 LAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIKC---LKNNAGLFCWMDLRPLLRE-----STFDSEMSLWRV 378 (428)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCB---CCCSSSSEEEEECGGGCSS-----SSHHHHHHHHHH
T ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcc---cCCCeeEEEEEechhhcCC-----CchhHHHHHHHH
Confidence 888886432 1 356778888889999988876 3222 223 467788887642110 001124467888
Q ss_pred HHHC-CcEEEeeC-------CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 462 CEKH-GMLVRVSG-------DNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 462 l~~~-Gv~~~~~g-------~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
|+++ ||++.+++ +.+||+++ .++++++++++++|++++++
T Consensus 379 l~~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~ 426 (428)
T 1iay_A 379 IINDVKLNVSPGSSFECQEPGWFRVCFA-NMDDGTVDIALARIRRFVGV 426 (428)
T ss_dssp HHHTSCEECEEGGGGTCSSSSEEEEECS-SSCHHHHHHHHHHHHHHHHT
T ss_pred HHHhCCEEEeCchhhCCCCCCEEEEEEe-cCCHHHHHHHHHHHHHHHhc
Confidence 8876 99998752 47999987 58999999999999988753
No 100
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.94 E-value=4.4e-25 Score=224.21 Aligned_cols=324 Identities=12% Similarity=0.150 Sum_probs=223.0
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ 178 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A 178 (514)
++.+|||.++. ++++ .+|+|++|+.++++....| +.....++.+.|+++++ .+.+++++++||++|++.+
T Consensus 29 ~~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~y------~~~~~~~lr~~la~~~~-~~~~~v~~~~g~~~a~~~~ 98 (365)
T 3get_A 29 VKEVIKLASNE--NPFG-TPPKAIECLRQNANKAHLY------PDDSMIELKSTLAQKYK-VQNENIIIGAGSDQVIEFA 98 (365)
T ss_dssp CSCCEECSSCC--CTTC-SCHHHHHHHHHHGGGTTSC------CCTTCHHHHHHHHHHHT-CCGGGEEEESSHHHHHHHH
T ss_pred CCceEEecCCC--CCCC-CCHHHHHHHHHHHHhhccC------CCCChHHHHHHHHHHhC-CCcceEEECCCHHHHHHHH
Confidence 37899998875 4566 7899999999998754322 12223688899999884 3467999999999999999
Q ss_pred HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250 179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258 (514)
Q Consensus 179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (514)
++... ..+++|++.+++|++........+.... .++.+ . +.+ .+++
T Consensus 99 ~~~l~--------~~gd~vl~~~~~~~~~~~~~~~~g~~~~-------------~v~~~--------~---~~~--~d~~ 144 (365)
T 3get_A 99 IHSKL--------NSKNAFLQAGVTFAMYEIYAKQCGAKCY-------------KTQSI--------T---HNL--DEFK 144 (365)
T ss_dssp HHHHC--------CTTCEEEECSSCCTHHHHHHHHHTCEEE-------------ECSSS--------S---CCH--HHHH
T ss_pred HHHHh--------CCCCEEEEeCCChHHHHHHHHHcCCEEE-------------EEecC--------C---CCC--CCHH
Confidence 98763 3357899999999876543332221111 11110 0 112 4467
Q ss_pred HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc--cc-ccc-eec---ccCC
Q 010250 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR--LG-TMF-GCD---KYSI 331 (514)
Q Consensus 259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr--~G-~~~-~~~---~~gv 331 (514)
++++.+. +++++|+++..++++|.+.+ .+.+++|.++| ++|+++|+||+|+++.. .| ... ... .++.
T Consensus 145 ~l~~~l~----~~~~~v~~~~p~nptG~~~~-~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (365)
T 3get_A 145 KLYETHK----DEIKLIFLCLPNNPLGECLD-ASEATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDN 218 (365)
T ss_dssp HHHHHTT----TTEEEEEEESSCTTTCCCCC-HHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTT
T ss_pred HHHHHhC----CCCCEEEEcCCCCCCCCCcC-HHHHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCC
Confidence 7777764 45777777666777787664 45566666666 67999999999997752 22 211 111 1222
Q ss_pred CCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHH
Q 010250 332 KPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPK 410 (514)
Q Consensus 332 ~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~ 410 (514)
...+.+++|.++.+++++|++++++++++.+... ..+++.++++++++.++|+..+ -++..++++++.++
T Consensus 219 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 289 (365)
T 3get_A 219 VLYLGTFSKLYGLGGLRIGYGIANANIISAFYKL---------RAPFNVSNLALKAAVAAMDDDEFTEKTLENNFSQMEL 289 (365)
T ss_dssp EEEEEESSSTTSCTTTCCEEEEECHHHHHHHHHH---------SCTTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeecchHhcCcchheEEEEcCHHHHHHHHHh---------cCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 2233478999873338999999999999988742 2346688999999988887432 13456777788888
Q ss_pred HHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC----CEEEEeCCCCCCH
Q 010250 411 FQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG----DNIMMSPPFIMSP 486 (514)
Q Consensus 411 l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g----~~iRi~p~~~~t~ 486 (514)
+.+.|+++ . +....+.|.++++.+.... ...+.+.|.++||.+.++. +.+|+++. ++
T Consensus 290 l~~~l~~~-g---~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~~~gi~v~~g~~~~~~~iRis~~---~~ 350 (365)
T 3get_A 290 YKEFAKKH-N---IKIIDSYTNFITYFFDEKN------------STDLSEKLLKKGIIIRNLKSYGLNAIRITIG---TS 350 (365)
T ss_dssp HHHHHHHT-T---CEECCCSSSEEEEECSSSC------------HHHHHHHHHTTTEECEECGGGTCSEEEEECC---CH
T ss_pred HHHHHHhC-C---CEECCCCCeEEEEECCCCC------------HHHHHHHHHHCCEEEEECccCCCCEEEEEcC---CH
Confidence 88888775 2 2223456777777775421 4568889999999998864 67999953 89
Q ss_pred HHHHHHHHHHHHHH
Q 010250 487 EEVDELISKYGKAL 500 (514)
Q Consensus 487 e~id~~~~~l~~~l 500 (514)
+|+++++++|++++
T Consensus 351 ~~i~~l~~~l~~~l 364 (365)
T 3get_A 351 YENEKFFTEFDKIL 364 (365)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998875
No 101
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.94 E-value=3.9e-26 Score=234.46 Aligned_cols=340 Identities=11% Similarity=0.066 Sum_probs=213.0
Q ss_pred EEeCCCCEEEEccCCcccccCC--CCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC-----CCCeEE
Q 010250 94 VYDVNGKKYLDSLAGLWCTALG--GSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS-----KMAKVF 166 (514)
Q Consensus 94 ~~d~dG~~ylD~~s~~~~~~lG--h~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~-----~~~~v~ 166 (514)
+.+..|+.+|||.+|.+.++.| +.+|.|.+++.+++++... +. ..+.....++.+.|++++... ..++|+
T Consensus 20 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~--y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~ 96 (396)
T 2q7w_A 20 FRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETT-KN--YLGIDGIPEFGRCTQELLFGKGSALINDKRAR 96 (396)
T ss_dssp --------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCC-CC--CCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEE
T ss_pred HhccCCCCceecccccccCCCCCccCcHHHHHHHHhhcCcccc-cC--CCCCCCCHHHHHHHHHHHhcCCCCccccccEE
Confidence 3344577899999997666666 5679999999998765311 11 112333567777777776221 257899
Q ss_pred E--eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccC
Q 010250 167 F--TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRY 242 (514)
Q Consensus 167 ~--~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 242 (514)
+ ++||++|++.+++++..+ .++++|++.+++||+........+.... .++.. +.|.
T Consensus 97 ~~~~~g~~~a~~~~~~~~~~~------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~-------------~~~~~~~~~~~- 156 (396)
T 2q7w_A 97 TAQTPGGTGALRVAADFLAKN------TSVKRVWVSNPSWPNHKSVFNSAGLEVR-------------EYAYYDAENHT- 156 (396)
T ss_dssp EEEESHHHHHHHHHHHHHHHH------SCCCEEEEEESCCTHHHHHHHHTTCEEE-------------EEECEETTTTE-
T ss_pred EEecccchhhHHHHHHHHHHh------CCCCEEEEcCCCchhHHHHHHHcCCceE-------------EEecccCCCCC-
Confidence 8 999999999999877533 2356899999999997644433222111 11110 0011
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc-
Q 010250 243 AHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG- 321 (514)
Q Consensus 243 ~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G- 321 (514)
.++++|++.+.+.. .+.+++++...++.+|.+ .+.+++++|.++|++||+++|+||+|++|++.|
T Consensus 157 ------------~d~~~l~~~l~~~~-~~~~~v~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~ 222 (396)
T 2q7w_A 157 ------------LDFDALINSLNEAQ-AGDVVLFHGCCHNPTGID-PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLE 222 (396)
T ss_dssp ------------ECHHHHHHHHTTCC-TTCEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHH
T ss_pred ------------cCHHHHHHHHHhCC-CCCEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEecccccccCCcc
Confidence 11577887775432 234556655556666754 567899999999999999999999999987654
Q ss_pred -ccceecccCCCCc----hhchhhhhc-CCcccceeEEe---CHH----HHHHhhhccCCCCcccccCCC-CCcHHHHHH
Q 010250 322 -TMFGCDKYSIKPD----LVSFAKALS-SAYMPIGAILV---SPE----VSEVIHSQSNTLGSFSHGFTY-SGHPVSCAV 387 (514)
Q Consensus 322 -~~~~~~~~gv~pD----iv~~sK~l~-gG~~pig~v~~---~~~----i~~~l~~~~~~~~~~~~~~t~-~~~pl~~aa 387 (514)
.......+...+| +.++||.++ .| +|+|++++ +++ +++.+.. .+..++ ..+++++++
T Consensus 223 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~a 293 (396)
T 2q7w_A 223 EDAEGLRAFAAMHKELIVASSYSXNFGLYN-ERVGACTLVAADSETVDRAFSQMKA--------AIRANYSNPPAHGASV 293 (396)
T ss_dssp HHTHHHHHHHHHCSCEEEEEECTTTTTCGG-GCCEEEEEECSSHHHHHHHHHHHHH--------HHHTTTSSCCHHHHHH
T ss_pred chhHHHHHHHhcCCcEEEEEeccccccccc-cccceEEEEcCCHHHHHHHHHHHHH--------HHhhccCCCCcHHHHH
Confidence 2223332222223 336899998 45 89999997 564 4444431 112344 348889988
Q ss_pred HHHHHHHH------h--hccHHHHHHHHHHHHHhhhhhcc---CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHH
Q 010250 388 AIEALKIY------K--ERNIVEQVNKIAPKFQDGVKAFS---DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGA 456 (514)
Q Consensus 388 a~aal~~~------~--~~~~~~~~~~~~~~l~~~L~~l~---~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~ 456 (514)
+.++|+.. . -+++.++++++.+++.+.|+++. ..... ....|.+.++.+. ..
T Consensus 294 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~~~~~~~~~~~~---------------~~ 356 (396)
T 2q7w_A 294 VATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFI--IKQNGMFSFSGLT---------------KE 356 (396)
T ss_dssp HHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHH--HHCCSSEEECCCC---------------HH
T ss_pred HHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccee--cCCCceEEEecCC---------------HH
Confidence 88888643 1 12356678888888888888762 12211 1122344333321 13
Q ss_pred HHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 457 YFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 457 ~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
.+...+.++||++.++ +||+++. .|++++++++++|++++
T Consensus 357 ~~~~~l~~~gv~v~~~---~Ris~~~-~~~e~i~~~~~~l~~~l 396 (396)
T 2q7w_A 357 QVLRLREEFGVYAVAS---GRVNVAG-MTPDNMAPLCEAIVAVL 396 (396)
T ss_dssp HHHHHHHHHCEECCTT---CEEEGGG-CCTTTHHHHHHHHHHHC
T ss_pred HHHHHHHhcCeeecCC---ceEEEee-cCHHHHHHHHHHHHhcC
Confidence 4556677899998763 7999874 49999999999998753
No 102
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.93 E-value=1.8e-24 Score=220.93 Aligned_cols=338 Identities=16% Similarity=0.134 Sum_probs=230.2
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV 179 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al 179 (514)
+.|+|..+ -++.+|++.+|+.+++.. ++.. ...+...+++++++++++....+.+++++||++|++.++
T Consensus 20 ~~~l~~~~------~~~~~~~v~~a~~~~~~~--~~~~---~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~ 88 (386)
T 2dr1_A 20 KYKLFTAG------PVACFPEVLEIMKVQMFS--HRSK---EYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASI 88 (386)
T ss_dssp CSEECCSS------SCCCCHHHHHHTTSCCCC--TTSH---HHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHH
T ss_pred cceeecCC------CcCCcHHHHHHHhccccc--ccCH---HHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHH
Confidence 46888743 345789999988776643 1211 124566788999999875322467999999999999999
Q ss_pred HHHHHHHhhcCCCCccEEEEEecCCcccce-eeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250 180 KLVWYYNNALGRPNKKKFIARQKSYHGSTL-IAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258 (514)
Q Consensus 180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (514)
+.+. .++++|++.+++||+... ......|... ..++.+..+. .+.+
T Consensus 89 ~~l~--------~~gd~vl~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~-------------~d~~ 135 (386)
T 2dr1_A 89 RNGV--------SKGGKVLVTIIGAFGKRYKEVVESNGRKA------------VVLEYEPGKA-------------VKPE 135 (386)
T ss_dssp HHHS--------CTTCEEEEEESSHHHHHHHHHHHHTTCEE------------EEEECCTTCC-------------CCHH
T ss_pred HHhh--------cCCCeEEEEcCCchhHHHHHHHHHhCCce------------EEEecCCCCC-------------CCHH
Confidence 8763 345789999999998321 1111112111 1111111111 1157
Q ss_pred HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhch
Q 010250 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF 338 (514)
Q Consensus 259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~ 338 (514)
+|++.+.+. +++++|+++++++.+|.+.+ +++|.++|++||+++|+||+|+ +|... +... ...+|++++
T Consensus 136 ~l~~~l~~~--~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~~~~~--~~~~--~~~~di~~~ 204 (386)
T 2dr1_A 136 DLDDALRKN--PDVEAVTITYNETSTGVLNP----LPELAKVAKEHDKLVFVDAVSA-MGGAD--IKFD--KWGLDVVFS 204 (386)
T ss_dssp HHHHHHHHC--TTCCEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTT-BTTBC--CCTT--TTTCSEEEE
T ss_pred HHHHHHhcC--CCCcEEEEEeecCCcchhCC----HHHHHHHHHHcCCeEEEEcccc-ccCcc--cccc--ccCCcEEEE
Confidence 788877541 35678888899999998876 9999999999999999999997 43321 1222 234688765
Q ss_pred h--hhhcCCcccceeEEeCHHHHHHhhhcc---CCC------Ccc--cccCCCCCcHHHHHHHHHHHHHHhhc----cHH
Q 010250 339 A--KALSSAYMPIGAILVSPEVSEVIHSQS---NTL------GSF--SHGFTYSGHPVSCAVAIEALKIYKER----NIV 401 (514)
Q Consensus 339 s--K~l~gG~~pig~v~~~~~i~~~l~~~~---~~~------~~~--~~~~t~~~~pl~~aaa~aal~~~~~~----~~~ 401 (514)
| |+++++ .++|++++++++++.+.... ... ... ....+++.++++++++.++|+.+.+. ++.
T Consensus 205 s~sK~~~~~-~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~ 283 (386)
T 2dr1_A 205 SSQKAFGVP-PGLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWL 283 (386)
T ss_dssp ETTSTTCCC-SSCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred eccccccCC-CceEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 5 999986 36899999999888774210 000 000 11335567888999999999987654 567
Q ss_pred HHHHHHHHHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCE
Q 010250 402 EQVNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDN 475 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~ 475 (514)
++++++++++.+.|+++ ........ ...+.++.+.+.... ....+.+.|.++||.+.++ .+.
T Consensus 284 ~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~gi~v~~~~~~~~~~~ 351 (386)
T 2dr1_A 284 EMYEKRAKMVREGVREI-GLDILAEPGHESPTITAVLTPPGI-----------KGDEVYEAMRKRGFELAKGYGSVKEKT 351 (386)
T ss_dssp HHHHHHHHHHHHHHHHT-TCCBSSCTTCBCSSEEEEECCTTC-----------CHHHHHHHHHHTTEECEECCGGGTTTE
T ss_pred HHHHHHHHHHHHHHHHc-CCeeCcCccccCCceEEEEcCCCC-----------CHHHHHHHHHHCCeEEecCccccCCCE
Confidence 88899999999999876 33322210 114667777775211 1456888999999999874 367
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 476 IMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 476 iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
+|++++..+|++|+++++++|+++++++..
T Consensus 352 iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 381 (386)
T 2dr1_A 352 FRIGHMGYMKFEDIQEMLDNLREVINELKK 381 (386)
T ss_dssp EEEECCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 999998889999999999999999877643
No 103
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.93 E-value=8.8e-25 Score=225.47 Aligned_cols=356 Identities=9% Similarity=0.012 Sum_probs=221.0
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc-cccccccCCchHHHHHHHHHHhcCc-CCC-CeEEEeCChhHHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFTA-SKM-AKVFFTNSGSEAND 176 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~-~~~~~~~~~~~~~ela~~L~~~~~~-~~~-~~v~~~~sGseA~~ 176 (514)
..+|||..|. ..++ .+|+|.+|+.+++..... .+....+..+....+++.+.+.++. ... +++++++||++|++
T Consensus 23 ~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~ 99 (410)
T 3e2y_A 23 PSVVNLGQGF--PDIS-PPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLF 99 (410)
T ss_dssp TTSEECSSCC--CCSC-CCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHH
T ss_pred CCeEEecCCC--CCCC-CCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHH
Confidence 4568887774 2343 689999999999875311 1111011223333444444433321 234 68999999999999
Q ss_pred HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHH
Q 010250 177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 256 (514)
Q Consensus 177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (514)
.+++.+. .++++|++.+++|++........ |.................. ....|. .+
T Consensus 100 ~~~~~~~--------~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~g~~~-~~~~~~-------------~d 156 (410)
T 3e2y_A 100 NSIQGLV--------DPGDEVIIMVPFYDCYEPMVRMA-GAVPVFIPLRSKPTDGMKW-TSSDWT-------------FD 156 (410)
T ss_dssp HHHHHHC--------CTTCEEEEEESCCTTHHHHHHHT-TCEEEEEECEECCCCSSCC-BGGGEE-------------CC
T ss_pred HHHHHhc--------CCCCEEEEeCCCchhhHHHHHHc-CCEEEEEeccccccccccc-cccCCc-------------CC
Confidence 9998773 34568999999999875433222 2111100000000000000 000000 11
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eecccCCC---
Q 010250 257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYSIK--- 332 (514)
Q Consensus 257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~gv~--- 332 (514)
++++++.+. +++++|++++.++++|.+. +++.+++|.++|++||+++|+||+|++|++.|..+ ....+...
T Consensus 157 ~~~l~~~~~----~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 231 (410)
T 3e2y_A 157 PRELESKFS----SKTKAIILNTPHNPLGKVY-TRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWER 231 (410)
T ss_dssp HHHHHTTCC----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGG
T ss_pred HHHHHhhcC----CCceEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCe
Confidence 456665553 4678888888888888765 56789999999999999999999999998877532 22222211
Q ss_pred -CchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH-------h--hccHHH
Q 010250 333 -PDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY-------K--ERNIVE 402 (514)
Q Consensus 333 -pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~-------~--~~~~~~ 402 (514)
.++.++||.++.+++++|++++++++++.+.. .....+++.++++++++.++|+.. . -++..+
T Consensus 232 ~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 304 (410)
T 3e2y_A 232 TITIGSAGKTFSVTGWKLGWSIGPAHLIKHLQT-------VQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPK 304 (410)
T ss_dssp EEEEEEHHHHSSCGGGCCEEEECCHHHHHHHHH-------HHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHH
T ss_pred EEEEecchhhcCCCCceEEEEEECHHHHHHHHH-------HHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHH
Confidence 33447899998333899999999999988863 244568888999999999988741 1 123456
Q ss_pred HHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH-HHCCcEEEeeC--------
Q 010250 403 QVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVSG-------- 473 (514)
Q Consensus 403 ~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~g-------- 473 (514)
+++++.+++.+.|+++ ++.......|.++++++...................+...+ .++||++.+++
T Consensus 305 ~~~~~~~~l~~~L~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~ 381 (410)
T 3e2y_A 305 ELEVKRDRMVRLLNSV---GLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSK 381 (410)
T ss_dssp HHHHHHHHHHHHHHTT---TCEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTH
T ss_pred HHHHHHHHHHHHHHHC---CCeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCC
Confidence 6777777888877765 33223334566777777643211100000001123455544 57799998632
Q ss_pred ----CEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250 474 ----DNIMMSPPFIMSPEEVDELISKYGK 498 (514)
Q Consensus 474 ----~~iRi~p~~~~t~e~id~~~~~l~~ 498 (514)
+.|||+ +..++++|++++++|++
T Consensus 382 ~~~~~~iRis--~~~~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 382 PHFEKLVRFC--FIKKDSTLDAAEEIFRA 408 (410)
T ss_dssp HHHTTEEEEE--CCCCHHHHHHHHHHHHT
T ss_pred CCCCCEEEEE--EcCCHHHHHHHHHHHHh
Confidence 569999 67799999999999875
No 104
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.93 E-value=5.1e-25 Score=228.20 Aligned_cols=344 Identities=17% Similarity=0.169 Sum_probs=223.9
Q ss_pred CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHh--cCCcc-----ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeC
Q 010250 97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN--TLPFY-----HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTN 169 (514)
Q Consensus 97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~--~~~~~-----~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~ 169 (514)
.++..|||+.++ |+.+|+|++++.+++. +.... +.+.....+...+++++|+++++ .+.++++|++
T Consensus 20 ~~~~iyld~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~~~~~v~~~~ 92 (423)
T 3lvm_A 20 MKLPIYLDYSAT------TPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVG-ADPREIVFTS 92 (423)
T ss_dssp CCSSEECBTTTC------CCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHT-CCGGGEEEES
T ss_pred cCCCEeecCCCc------CCCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcC-CCCCeEEEeC
Confidence 456789997654 4679999999999887 32111 00101123455788899999884 3456899999
Q ss_pred ChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee--cCCCccccCCCCCCCCcccccCCCCcccCCCCCC
Q 010250 170 SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS--LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGE 247 (514)
Q Consensus 170 sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~--~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (514)
||++|++.+++.+..+.. ..+++|++.++.|++....... ..|... ..++....+.
T Consensus 93 ggt~a~~~a~~~l~~~~~----~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~------ 150 (423)
T 3lvm_A 93 GATESDNLAIKGAANFYQ----KKGKHIITSKTEHKAVLDTCRQLEREGFEV------------TYLAPQRNGI------ 150 (423)
T ss_dssp SHHHHHHHHHHHHHHHHT----TTCCEEEEETTSCHHHHHHHHHHHHTTCEE------------EEECCCTTSC------
T ss_pred ChHHHHHHHHHHHHHhhc----cCCCEEEECCccchHHHHHHHHHHHcCCEE------------EEeccCCCCc------
Confidence 999999999997754321 2357899999999886433221 112111 1111111110
Q ss_pred ChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceec
Q 010250 248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCD 327 (514)
Q Consensus 248 ~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~ 327 (514)
.++++|++.+. +++++|+++++++++|.+.+ +++|+++|++||++||+||+++ +|.. ...
T Consensus 151 -------~d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~-~~~~----~~~ 210 (423)
T 3lvm_A 151 -------IDLKELEAAMR----DDTILVSIMHVNNEIGVVQD----IAAIGEMCRARGIIYHVDATQS-VGKL----PID 210 (423)
T ss_dssp -------CCHHHHHHHCC----TTEEEEECCSBCTTTCBBCC----HHHHHHHHHHHTCEEEEECTTT-TTTS----CCC
T ss_pred -------cCHHHHHHhcC----CCcEEEEEeCCCCCCccccC----HHHHHHHHHHcCCEEEEEhhhh-cCCC----CcC
Confidence 01467777664 46899999999999998887 9999999999999999999987 3322 223
Q ss_pred ccCCCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHH
Q 010250 328 KYSIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQ 403 (514)
Q Consensus 328 ~~gv~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~ 403 (514)
.....+|++++| |.+++ .++|++++++++++.+.......+......+...++.+++++.++++.+.+ +++.++
T Consensus 211 ~~~~~~di~~~s~sK~~g~--~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~ 288 (423)
T 3lvm_A 211 LSQLKVDLMSFSGHKIYGP--KGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMER 288 (423)
T ss_dssp TTTSCCSEEEEESTTTTSC--SSCEEEEECBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcCCCEEEechHHhcCC--CCeEEEEEeccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334457888755 95543 469999999887665542110000000112345567788888788887765 567788
Q ss_pred HHHHHHHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----------
Q 010250 404 VNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---------- 472 (514)
Q Consensus 404 ~~~~~~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------- 472 (514)
++++++++++.|+++....+.... ...+.++.+.+.... ...+.+.|.+ +.+.++
T Consensus 289 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~l~~~l~~--i~v~~g~~~~~~~~~~ 354 (423)
T 3lvm_A 289 LRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVE------------GESLIMALKD--LAVSSGSACTSASLEP 354 (423)
T ss_dssp HHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEETTSC------------HHHHHHHTTT--EECBCCCC-----CCC
T ss_pred HHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEeCCCC------------HHHHHHHHhh--heeccCccccCCCccc
Confidence 888899999988765221111110 011345566653211 3446666655 555542
Q ss_pred --------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 473 --------------GDNIMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 473 --------------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
.+.|||+++..+|++||++++++|+++++++.+
T Consensus 355 ~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~~~~ 401 (423)
T 3lvm_A 355 SYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRD 401 (423)
T ss_dssp CHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence 267999999999999999999999999987764
No 105
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.93 E-value=1e-24 Score=223.66 Aligned_cols=331 Identities=14% Similarity=0.111 Sum_probs=225.8
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCC-eEEEeCChhHHHHH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMA-KVFFTNSGSEANDT 177 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~-~v~~~~sGseA~~~ 177 (514)
++.|+|..+ -++.+|+|.+|+.+++.. .+.. ...+...+++++++++++. +.+ ++++++||++|++.
T Consensus 33 ~~~~l~~~~------~~~~~~~v~~a~~~~~~~--~~~~---~~~~~~~~~~~~la~~~g~-~~~~~v~~t~g~t~al~~ 100 (393)
T 1vjo_A 33 PSRLLLGPG------PSNAHPSVLQAMNVSPVG--HLDP---AFLALMDEIQSLLRYVWQT-ENPLTIAVSGTGTAAMEA 100 (393)
T ss_dssp CCCEECSSS------CCCCCHHHHHHHSSCCCC--TTSH---HHHHHHHHHHHHHHHHHTC-CCSCEEEESSCHHHHHHH
T ss_pred ccceeccCC------CCCCCHHHHHHHhccccc--ccCH---HHHHHHHHHHHHHHHHhCC-CCCcEEEEeCchHHHHHH
Confidence 456888543 246789999998877653 1211 1235567888999988743 446 89999999999999
Q ss_pred HHHHHHHHHhhcCCCCccEEEEEecCCccccee-eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHH
Q 010250 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI-AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 256 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (514)
+++.++ .++++|++.+++||+.+.. .....|... ..++.+..+. .+
T Consensus 101 ~~~~~~--------~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~-------------~d 147 (393)
T 1vjo_A 101 TIANAV--------EPGDVVLIGVAGYFGNRLVDMAGRYGADV------------RTISKPWGEV-------------FS 147 (393)
T ss_dssp HHHHHC--------CTTCEEEEEESSHHHHHHHHHHHHTTCEE------------EEEECCTTCC-------------CC
T ss_pred HHHhcc--------CCCCEEEEEcCChhHHHHHHHHHHcCCce------------EEEecCCCCC-------------CC
Confidence 999874 3456899999999983211 111112111 1111111110 11
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh
Q 010250 257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV 336 (514)
Q Consensus 257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv 336 (514)
+++|++.+.+. ++++|+++++++.+|.+.+ +++|.++|++||+++|+||+|+ +|... .......+|++
T Consensus 148 ~~~l~~~l~~~---~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~-~g~~~----~~~~~~~~di~ 215 (393)
T 1vjo_A 148 LEELRTALETH---RPAILALVHAETSTGARQP----LEGVGELCREFGTLLLVDTVTS-LGGVP----IFLDAWGVDLA 215 (393)
T ss_dssp HHHHHHHHHHH---CCSEEEEESEETTTTEECC----CTTHHHHHHHHTCEEEEECTTT-TTTSC----CCTTTTTCSEE
T ss_pred HHHHHHHHhhC---CceEEEEeccCCCcceecc----HHHHHHHHHHcCCEEEEECCcc-ccCcC----CcccccCccEE
Confidence 57788877642 3567888899899998876 8999999999999999999998 76432 22234467888
Q ss_pred chh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCcccc------------cCCC-CCcHHHHHHHHHHHHHHhh---c
Q 010250 337 SFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSH------------GFTY-SGHPVSCAVAIEALKIYKE---R 398 (514)
Q Consensus 337 ~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~------------~~t~-~~~pl~~aaa~aal~~~~~---~ 398 (514)
+.| |+++++. ++|++++++++++.+.........+.+ ..++ +.++++++++.++|+.+.+ +
T Consensus 216 ~~s~sK~l~~~~-~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~ 294 (393)
T 1vjo_A 216 YSCSQKGLGCSP-GASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLA 294 (393)
T ss_dssp ECCSSSTTCSCS-SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHH
T ss_pred EEcCcccccCCC-ceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHH
Confidence 655 9999885 999999999998887532101111111 1234 6688899999999988754 3
Q ss_pred cHHHHHHHHHHHHHhhhhhccCCCceeEEEe--eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee---
Q 010250 399 NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG--TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS--- 472 (514)
Q Consensus 399 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g--~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~--- 472 (514)
++.++++++++++.+.|+++ ...+... .+ .+.+..+.++... ....+.+.|.++ ||.+.++
T Consensus 295 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~~gi~v~~g~~~ 361 (393)
T 1vjo_A 295 NCWQRHQKNVEYLWERLEDI-GLSLHVE-KEYRLPTLTTVCIPDGV-----------DGKAVARRLLNEHNIEVGGGLGE 361 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCCBSSC-GGGBCSSEEEEECCTTC-----------CHHHHHHHHHHHHCEECEECCGG
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCcccCC-ccccCCcEEEEEcCCCC-----------CHHHHHHHHHhhCCEEEecCccc
Confidence 56788999999999999876 3333221 11 2345566653211 145688889888 9999874
Q ss_pred --CCEEEEeC-CCCCCHHHHHHHHHHHHHHH
Q 010250 473 --GDNIMMSP-PFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 473 --g~~iRi~p-~~~~t~e~id~~~~~l~~~l 500 (514)
.+.+||++ ++..+++++++++++|++++
T Consensus 362 ~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 362 LAGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp GTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 36799995 56678889999999998875
No 106
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.93 E-value=4.5e-25 Score=223.80 Aligned_cols=316 Identities=15% Similarity=0.132 Sum_probs=212.8
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ 178 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A 178 (514)
.+++|||.+|. +++|+ +|.+ + +.....| +.....++.+.|+++++ .+.+++++++||+||++.+
T Consensus 28 ~~~~i~l~~~~--~~~~~-~~~v--a----~~~~~~Y------~~~~~~~lr~~la~~~~-~~~~~v~~~~G~~~ai~~~ 91 (356)
T 1fg7_A 28 GNGDVWLNANE--YPTAV-EFQL--T----QQTLNRY------PECQPKAVIENYAQYAG-VKPEQVLVSRGADEGIELL 91 (356)
T ss_dssp TTCSEECSSCC--CSSCC-CCCC--C----CCCTTSC------CCSSCHHHHHHHHHHHT-SCGGGEEEESHHHHHHHHH
T ss_pred CCceEEeeCCC--CCCCC-CHhH--h----hhhhccC------CCccHHHHHHHHHHHhC-CChHHEEEcCCHHHHHHHH
Confidence 35689998885 67897 4555 2 2222112 22225788999999884 3457899999999999999
Q ss_pred HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250 179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258 (514)
Q Consensus 179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (514)
++.+. .+++++|++.+++||+........+. ... .++..+.|. .+++
T Consensus 92 ~~~~~-------~~g~d~Vl~~~p~~~~~~~~~~~~g~-~~~------------~v~~~~~~~-------------~d~~ 138 (356)
T 1fg7_A 92 IRAFC-------EPGKDAILYCPPTYGMYSVSAETIGV-ECR------------TVPTLDNWQ-------------LDLQ 138 (356)
T ss_dssp HHHHC-------CTTTCEEEECSSSCTHHHHHHHHHTC-EEE------------ECCCCTTSC-------------CCHH
T ss_pred HHHHh-------CCCCCEEEEeCCChHHHHHHHHHcCC-EEE------------EeeCCCCCC-------------CCHH
Confidence 98763 13337899999999997644433221 111 111111111 0135
Q ss_pred HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccccee-cccCCCCchhc
Q 010250 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC-DKYSIKPDLVS 337 (514)
Q Consensus 259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~-~~~gv~pDiv~ 337 (514)
++++.+. ++++|++...++++|.+. +.+++++|.++|+ ||+++|+||+|++|++....... +.++....+.+
T Consensus 139 ~l~~~i~-----~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s 211 (356)
T 1fg7_A 139 GISDKLD-----GVKVVYVCSPNNPTGQLI-NPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRT 211 (356)
T ss_dssp HHHTSCT-----TEEEEEEESSCTTTCCCC-CHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEE
T ss_pred HHHHHhc-----CCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEec
Confidence 5555442 456666666778888765 5789999999999 99999999999988632222221 22222223447
Q ss_pred hhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHhh
Q 010250 338 FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK---ERNIVEQVNKIAPKFQDG 414 (514)
Q Consensus 338 ~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~---~~~~~~~~~~~~~~l~~~ 414 (514)
+||.++.+++++|++++++++++.+... ..+|+.|+++++++.++|+... -++..++++++++++.+.
T Consensus 212 ~sK~~g~~G~r~G~~~~~~~~~~~l~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 282 (356)
T 1fg7_A 212 LSKAFALAGLRCGFTLANEEVINLLMKV---------IAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAA 282 (356)
T ss_dssp SSSTTCCGGGCCEEEEECHHHHHHHHHH---------SCSSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHhhcCchhhhEEEEeCHHHHHHHHHh---------cCCCCCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHH
Confidence 8999873338999999999999888742 2356788999999998886533 234567778888888888
Q ss_pred hhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC------CEEEEeCCCCCCHHH
Q 010250 415 VKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG------DNIMMSPPFIMSPEE 488 (514)
Q Consensus 415 L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g------~~iRi~p~~~~t~e~ 488 (514)
|+++.. +....++.|.++.+.+. . ...+.+.|.++||++++.| +.+|++++ +++|
T Consensus 283 L~~~~~--~~~~~~~~~~~~~~~~~--~------------~~~l~~~L~~~gI~v~~~g~~~~~~~~iRis~~---~~~e 343 (356)
T 1fg7_A 283 LKEIPC--VEQVFDSETNYILARFK--A------------SSAVFKSLWDQGIILRDQNKQPSLSGCLRITVG---TREE 343 (356)
T ss_dssp HHHSTT--EEEECCCSSSEEEEEET--T------------HHHHHHHHHHTTEECEECTTSTTCTTEEEEECC---CHHH
T ss_pred HHhCCC--ceEECCCCCeEEEEECC--C------------HHHHHHHHHHCCEEEEECCCCCCCCCeEEEEeC---CHHH
Confidence 877521 12223455777777774 1 3457888999999999832 47999964 7899
Q ss_pred HHHHHHHHHH
Q 010250 489 VDELISKYGK 498 (514)
Q Consensus 489 id~~~~~l~~ 498 (514)
+++++++|++
T Consensus 344 ~~~~~~~l~~ 353 (356)
T 1fg7_A 344 SQRVIDALRA 353 (356)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999998875
No 107
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.93 E-value=1.3e-25 Score=228.27 Aligned_cols=330 Identities=14% Similarity=0.131 Sum_probs=224.5
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC---c--cccccccCCchHHHHHHH-HHHhcCcCCCCeEEEeCChhH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP---F--YHSFWNRTTKPSLDLAKE-LLEMFTASKMAKVFFTNSGSE 173 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~---~--~~~~~~~~~~~~~ela~~-L~~~~~~~~~~~v~~~~sGse 173 (514)
-.|||+.+ +.++.+|++.+|+.+++.... + .+.....+.+...++++. ++++++. +.++|++||++
T Consensus 9 ~i~ld~~~-----~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~---~~v~~~~g~t~ 80 (371)
T 2e7j_A 9 FINIDPLQ-----TGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGC---DVARVTNGARE 80 (371)
T ss_dssp CEECCHHH-----HTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTS---SEEEEESSHHH
T ss_pred cEEecccc-----cCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCC---CEEEEeCChHH
Confidence 45677632 356689999999999886542 1 111112345677899999 9999843 28999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccC--CCCcccCCCCCCChhH
Q 010250 174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTD--CPHYWRYAHPGETEEE 251 (514)
Q Consensus 174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 251 (514)
|++.+++.+. .++++|++.+++||+..... ...|... ..++ ....+.
T Consensus 81 a~~~~~~~~~--------~~gd~vl~~~~~~~~~~~~~-~~~g~~~------------~~v~~~~~~~~~---------- 129 (371)
T 2e7j_A 81 AKFAVMHSLA--------KKDAWVVMDENCHYSSYVAA-ERAGLNI------------ALVPKTDYPDYA---------- 129 (371)
T ss_dssp HHHHHHHHHC--------CTTCEEEEETTCCHHHHHHH-HHTTCEE------------EEECCCCTTTCC----------
T ss_pred HHHHHHHHHh--------CCCCEEEEccCcchHHHHHH-HHcCCeE------------EEeecccCCCCC----------
Confidence 9999999873 34578999999999875442 2222211 1111 110010
Q ss_pred HHHHHHHHHHHHHHHhCC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccC
Q 010250 252 YSTRLANNLEDLILKEGP-ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS 330 (514)
Q Consensus 252 ~~~~~~~~le~li~~~~~-~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~g 330 (514)
.++++|++.+.+... +++++|+++++++++|.+.+ +++|.++|++||+++|+||+|+. |..+ .....+
T Consensus 130 ---~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~----~~~i~~~~~~~~~~li~D~a~~~-~~~~--~~~~~~- 198 (371)
T 2e7j_A 130 ---ITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPD----VKKIAKVCSEYDVPLLVNGAYAI-GRMP--VSLKEI- 198 (371)
T ss_dssp ---CCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCC----HHHHHHHHHTTTCCEEEECTTTB-TTBC--CCHHHH-
T ss_pred ---cCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccCC----HHHHHHHHHHcCCeEEEECcccc-CCCC--CChhhc-
Confidence 115778888764321 36788999999999998887 89999999999999999999984 3332 222233
Q ss_pred CCCchh--chhhhhcCCcccceeEEeCHHHHHH-hhhccCCCCcccccC-----CCCCcHHHHHHHHHHHHHHhhccHHH
Q 010250 331 IKPDLV--SFAKALSSAYMPIGAILVSPEVSEV-IHSQSNTLGSFSHGF-----TYSGHPVSCAVAIEALKIYKERNIVE 402 (514)
Q Consensus 331 v~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~-l~~~~~~~~~~~~~~-----t~~~~pl~~aaa~aal~~~~~~~~~~ 402 (514)
.+|++ +++|+++++ .++|++++++++++. +..... .... ++..++..++++.++++.+.+ ++.+
T Consensus 199 -~~di~~~s~sK~~~~~-~~~G~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~ 270 (371)
T 2e7j_A 199 -GADFIVGSGHKSMAAS-GPIGVMGMKEEWAEIVLRRSEK-----YKNKEVELLGCTARGATIITLMASFPHVRE-RIKR 270 (371)
T ss_dssp -TCSEEEEEHHHHSSCC-SSCEEEEECTTTTTTTTCBCSS-----CTTSBGGGTTCCCCSHHHHHHHHHHHHHHH-HGGG
T ss_pred -CCCEEEecCCcCCCCC-CCcEEEEEechhhhhhcccccc-----CcccccccccCCcCHHHHHHHHHHHHHHHH-HHHH
Confidence 36766 568999988 599999999988776 653110 0111 455678888888888988766 6778
Q ss_pred HH--HHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe--------e
Q 010250 403 QV--NKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV--------S 472 (514)
Q Consensus 403 ~~--~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~--------~ 472 (514)
++ +++++++.+.|+++ ...+.....+.+.++.+.+. . ...+.+.|.++||.+.+ +
T Consensus 271 ~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~--~------------~~~~~~~l~~~gi~~~~~~~~~~~~g 335 (371)
T 2e7j_A 271 WDEEVEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAE--V------------LYEISKKAKGGRFFLYRELKSRKIHG 335 (371)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECH--H------------HHHHHHHSSSGGGHHHHHHHHTTEEC
T ss_pred HHHHHHHHHHHHHHHHHc-CcEEecCCCccCceEEEECC--C------------HHHHHHHHHHCCEEEEeccccccccC
Confidence 88 89999999999876 32222211113667777764 1 34577788888988765 1
Q ss_pred --CCEEE-EeCCCC-CCHHHHHHHHHHHHHHHHH
Q 010250 473 --GDNIM-MSPPFI-MSPEEVDELISKYGKALKA 502 (514)
Q Consensus 473 --g~~iR-i~p~~~-~t~e~id~~~~~l~~~l~~ 502 (514)
.+.+| ++++.. +|++++++++++|++++++
T Consensus 336 ~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~ 369 (371)
T 2e7j_A 336 IKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEK 369 (371)
T ss_dssp SCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHh
Confidence 35689 998877 8999999999999998864
No 108
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.93 E-value=4.4e-25 Score=228.25 Aligned_cols=345 Identities=13% Similarity=0.052 Sum_probs=215.7
Q ss_pred CCEEEEccCCcccccCCC--CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250 99 GKKYLDSLAGLWCTALGG--SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 176 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh--~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~ 176 (514)
|+.+|||..|....+-|+ .+|.|.+|+.+......+.+....+..+....+++++.....+...+++++++||++|++
T Consensus 36 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~al~ 115 (413)
T 3t18_A 36 REAVINAALGTLLDDKGKIIALPSVYDRLDEMDRSHIASYAPIEGEKDYRKIVIDTLFGPYKPEGYISAIATPGGTGAIR 115 (413)
T ss_dssp GGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHH
T ss_pred ccceEeccccCccCCCCCcCChHHHHHHHHhcCcccccCcCCCCCCHHHHHHHHHHHhcccCccccCcEEEcCccHHHHH
Confidence 567899988854333343 466787777653221111111111233344445555544332223349999999999999
Q ss_pred HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC-CCcccCCCCCCChhHHHHH
Q 010250 177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC-PHYWRYAHPGETEEEYSTR 255 (514)
Q Consensus 177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (514)
.+++... ..++.|++.+++|++........+.... .++. +..|. .
T Consensus 116 ~~~~~~~--------~~gd~Vl~~~p~~~~~~~~~~~~g~~~~-------------~~~~~~~~~~-------------~ 161 (413)
T 3t18_A 116 SAIFSYL--------DEGDPLICHDYYWAPYRKICEEFGRNFK-------------TFEFFTDDFA-------------F 161 (413)
T ss_dssp HHHHHHC--------CSSCEEEEESSCCTHHHHHHHHHTCEEE-------------EECCBCTTSS-------------B
T ss_pred HHHHHhc--------CCCCEEEECCCCcccHHHHHHHhCCeEE-------------EeeccCCCCC-------------c
Confidence 9998763 3356899999999887543332222111 1111 00011 1
Q ss_pred HHHHHHHHHHHh-CCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHH------hcCCEEEEechhcCccccccc---c
Q 010250 256 LANNLEDLILKE-GPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVK------KYDILFIADEVICAFGRLGTM---F 324 (514)
Q Consensus 256 ~~~~le~li~~~-~~~~~aavivEpv-~~~~G~~~p~~~~L~~l~~l~~------~~gillI~DEv~tG~gr~G~~---~ 324 (514)
++++|++.+.+. .++..++++++.. ++++|.+. +.+.+++|.++|+ +||+++|+||+|.+|++.|.. +
T Consensus 162 d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~-~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~ 240 (413)
T 3t18_A 162 NIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSL-SDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKF 240 (413)
T ss_dssp CHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCC-CHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGG
T ss_pred CHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHH
Confidence 157777777542 1124446666644 78888765 5567999999999 999999999999999888752 2
Q ss_pred eecccCCCCch--h---chhhhhcCCcccceeEEe---CHHHHHHhhhccCCCCccc-ccCCCCCcHHHHHHHHHHHHHH
Q 010250 325 GCDKYSIKPDL--V---SFAKALSSAYMPIGAILV---SPEVSEVIHSQSNTLGSFS-HGFTYSGHPVSCAVAIEALKIY 395 (514)
Q Consensus 325 ~~~~~gv~pDi--v---~~sK~l~gG~~pig~v~~---~~~i~~~l~~~~~~~~~~~-~~~t~~~~pl~~aaa~aal~~~ 395 (514)
.....++.+|+ + +|||.++.+++++|++++ ++++++.+.... ... .+.....++++++++.++++..
T Consensus 241 ~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~a~~~~l~~~ 316 (413)
T 3t18_A 241 FEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSKEIIEEFEASL----AHSARCNWSNGTHAAQNILIELERAE 316 (413)
T ss_dssp GGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCHHHHHHHHHHH----HHHHHHHTSSCCHHHHHHHHHTTSHH
T ss_pred HHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCCHHHHHHHHHHH----HHhhhccccCCChHHHHHHHHHhcCh
Confidence 23334555663 2 799999843389999999 999998886421 111 1122456788888887776532
Q ss_pred h-----h--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeee-eeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCc
Q 010250 396 K-----E--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM 467 (514)
Q Consensus 396 ~-----~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 467 (514)
. + +++.++++++.+++.+.|+++ ..... ...| .+..+.+.+ ...+.+.|.++||
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~---~~~~~~~~~~~~~~--------------~~~~~~~l~~~gv 378 (413)
T 3t18_A 317 NKKIYEQELVDLRNMLKSRADVFVTAAKEN-KLTMI---PYFGGFFTFIPTDK--------------AFDIVKDLEKENI 378 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCB---CCCSSSCEEEECSC--------------HHHHHHHHHHTTE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCcc---CCCceEEEEeCCCC--------------HHHHHHHHHhCCE
Confidence 1 1 245677888888888888876 32222 2233 344444311 3457788999999
Q ss_pred EEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 468 LVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 468 ~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
++.++++.+||+++. .+++++ +++|.++++++.
T Consensus 379 ~v~~g~~~iRis~~~-~~~~~~---l~~l~~~l~~~~ 411 (413)
T 3t18_A 379 FTIPSAKGIRVAICG-VGEEKI---PKLVQRLAFYTN 411 (413)
T ss_dssp ECEECSSEEEECTTT-SCGGGH---HHHHHHHHHHHH
T ss_pred EEecCCCceEEEEee-CCHHHH---HHHHHHHHHHHh
Confidence 999988899999773 455555 888888877654
No 109
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.93 E-value=1.3e-25 Score=230.44 Aligned_cols=339 Identities=12% Similarity=0.070 Sum_probs=220.9
Q ss_pred CCCEEEEccCCcccccCC--CCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC--CCCeEEE--eCCh
Q 010250 98 NGKKYLDSLAGLWCTALG--GSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS--KMAKVFF--TNSG 171 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lG--h~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~--~~~~v~~--~~sG 171 (514)
.|+.+|||.+|.+.++.| +.+|.|.+|+.+++++... +. + .+.....++.+.+++++... ..++|+| ++||
T Consensus 24 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~-y-~~~~g~~~lr~~la~~~~~~~~~~~~v~~~~~~g~ 100 (394)
T 2ay1_A 24 PRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETT-KT-Y-AGLSGEPEFQKAMGELILGDGLKSETTATLATVGG 100 (394)
T ss_dssp CCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCC-CC-C-CCSSCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHH
T ss_pred CCccccccccceeeCCCCCccCcHHHHHHHHHhcCCccc-CC-C-CCCCCcHHHHHHHHHHHhCCCCCcccEEEEecCCc
Confidence 466789999997655556 5689999999998764211 11 1 12233467777777775222 4578999 9999
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCCh
Q 010250 172 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETE 249 (514)
Q Consensus 172 seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 249 (514)
++|++.++++++.+ .++++|++.+++||+........+.... .++.. +.|.
T Consensus 101 ~~a~~~~~~~~~~~------~~gd~vl~~~p~~~~~~~~~~~~g~~~~-------------~~~~~~~~~~~-------- 153 (394)
T 2ay1_A 101 TGALRQALELARMA------NPDLRVFVSDPTWPNHVSIMNFMGLPVQ-------------TYRYFDAETRG-------- 153 (394)
T ss_dssp HHHHHHHHHHHHHH------CTTCCEEEEESCCHHHHHHHHHHTCCEE-------------EEECEETTTTE--------
T ss_pred hhHHHHHHHHHHhc------CCCCEEEEcCCCChhHHHHHHHcCCceE-------------EEecccccCCc--------
Confidence 99999999987643 2346799999999997654433322111 01110 0010
Q ss_pred hHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc--ccceec
Q 010250 250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG--TMFGCD 327 (514)
Q Consensus 250 ~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G--~~~~~~ 327 (514)
.+.+++++.+.+. +...+++++...++++|.+ .+.+++++|.++|++||+++|+||+|++|++.| ......
T Consensus 154 -----~d~~~l~~~l~~~-~~~~~~~~~~~~~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 226 (394)
T 2ay1_A 154 -----VDFEGMKADLAAA-KKGDMVLLHGCCHNPTGAN-LTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTR 226 (394)
T ss_dssp -----ECHHHHHHHHHTC-CTTCEEEEESSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHH
T ss_pred -----cCHHHHHHHHHhC-CCCCEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHH
Confidence 1157788877643 2245677777777888865 567899999999999999999999999987654 222222
Q ss_pred cc-CCCCchh---chhhhhc-CCcccceeEEe---CHHHHHHhhhccCCCCcccccCCCC-CcHHHHHHHHHHHHHH---
Q 010250 328 KY-SIKPDLV---SFAKALS-SAYMPIGAILV---SPEVSEVIHSQSNTLGSFSHGFTYS-GHPVSCAVAIEALKIY--- 395 (514)
Q Consensus 328 ~~-gv~pDiv---~~sK~l~-gG~~pig~v~~---~~~i~~~l~~~~~~~~~~~~~~t~~-~~pl~~aaa~aal~~~--- 395 (514)
.+ ...+|++ ++||.++ .| +|+|++++ ++++++.+.... .. .+..++. .++++++++.++|+..
T Consensus 227 ~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~l~~~~---~~-~~~~~~~~~~~~~~~a~~~~l~~~~l~ 301 (394)
T 2ay1_A 227 LIASRIPEVLIAASCSKNFGIYR-ERTGCLLALCADAATRELAQGAM---AF-LNRQTYSFPPFHGAKIVSTVLTTPELR 301 (394)
T ss_dssp HHHHHCSSEEEEEECTTTTTCGG-GCEEEEEEECSSHHHHHHHHHHH---HH-HHHTTTSSCCCHHHHHHHHHHHSHHHH
T ss_pred HHhhcCCCEEEEEeccCCCcCcC-CccceEEEEeCCHHHHHHHHHHH---HH-HHhhhcCCCChHHHHHHHHHhcChHHH
Confidence 12 1234433 6899998 45 89999998 676654443210 00 1123443 4888898888888743
Q ss_pred ---h--hccHHHHHHHHHHHHHhhhhhcc---CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCc
Q 010250 396 ---K--ERNIVEQVNKIAPKFQDGVKAFS---DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM 467 (514)
Q Consensus 396 ---~--~~~~~~~~~~~~~~l~~~L~~l~---~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 467 (514)
. -+++.++++++++++.+.|+++. ...... ...|.++++.+. ...+...+.++||
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~~~g~~~~~~~~---------------~~~~~~~l~~~gi 364 (394)
T 2ay1_A 302 ADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVA--EHRGMFSRLGAT---------------PEQVKRIKEEFGI 364 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHH--HCCSSEEECCCC---------------HHHHHHHHHHHCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEc--CCceEEEeeCCC---------------HHHHHHHHHhCCE
Confidence 1 23467788888888888888762 122211 122455444331 1246667778999
Q ss_pred EEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250 468 LVRVSGDNIMMSPPFIMSPEEVDELISKYGKA 499 (514)
Q Consensus 468 ~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~ 499 (514)
++.++ +||+++ .+|++++++++++|+++
T Consensus 365 ~v~~~---~Ris~~-~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 365 YMVGD---SRINIA-GLNDNTIPILARAIIEV 392 (394)
T ss_dssp ECCTT---CEEEGG-GCCTTTHHHHHHHHHHH
T ss_pred EecCC---CeEEee-cCCHhhHHHHHHHHHHc
Confidence 98763 699976 47999999999999875
No 110
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.93 E-value=1.4e-24 Score=223.56 Aligned_cols=342 Identities=15% Similarity=0.099 Sum_probs=222.3
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhc-CCc-cc-cccccCCchHHHHH----HHHHHhcCcCCCCeEEEeCChh
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNT-LPF-YH-SFWNRTTKPSLDLA----KELLEMFTASKMAKVFFTNSGS 172 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~-~~~-~~-~~~~~~~~~~~ela----~~L~~~~~~~~~~~v~~~~sGs 172 (514)
++|||+.++.. ++ +|+|.+|+.+++.+ ... +. ..+....+....++ ++++++++. + ...+++++|+
T Consensus 23 ~~~i~~~~~~~--~~---~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~-~-~~~i~~~sGt 95 (407)
T 2dkj_A 23 REGLELIASEN--FV---SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGA-A-WANVQPHSGS 95 (407)
T ss_dssp HTSEECCTTCC--CC---CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC-S-EEECCCSSHH
T ss_pred hcceeeccCCC--CC---CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCC-C-cceEEecchH
Confidence 46899988863 33 89999999999864 222 21 11110111111222 477777732 2 2336678899
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccc--eeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCCh
Q 010250 173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGST--LIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETE 249 (514)
Q Consensus 173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t--~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 249 (514)
+|++.+++.++ .++++|++.+++|++.. ...+...|.... ....++. +.+.
T Consensus 96 ~a~~~~~~~~~--------~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~----------~~~~~~~~~~~~-------- 149 (407)
T 2dkj_A 96 QANMAVYMALM--------EPGDTLMGMDLAAGGHLTHGSRVNFSGKLYK----------VVSYGVRPDTEL-------- 149 (407)
T ss_dssp HHHHHHHHHHC--------CTTCEEEEECGGGTCCGGGTCTTSHHHHHSE----------EEEECCCTTTSS--------
T ss_pred HHHHHHHHHhc--------CCCCEEEEecccccCccchHHHHHhcCceEE----------EEecCCCcccCc--------
Confidence 99999999873 34568999999998763 222222221000 0001100 0111
Q ss_pred hHHHHHHHHHHHHHHHHhCCCcEEEEEE-ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC-cccccccceec
Q 010250 250 EEYSTRLANNLEDLILKEGPETIAAFIA-EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA-FGRLGTMFGCD 327 (514)
Q Consensus 250 ~~~~~~~~~~le~li~~~~~~~~aaviv-Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG-~gr~G~~~~~~ 327 (514)
.++++|++.+.+. ++++|++ +|.++ .+.+ +++|.++|++||+++|+||+|++ +...|....
T Consensus 150 -----~d~~~l~~~l~~~---~~~~v~~~~p~~~---~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~-- 212 (407)
T 2dkj_A 150 -----IDLEEVRRLALEH---RPKVIVAGASAYP---RFWD----FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPN-- 212 (407)
T ss_dssp -----CCHHHHHHHHHHH---CCSEEEECCSSCC---SCCC----HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCC--
T ss_pred -----cCHHHHHHHHhhc---CCeEEEEeccccC---CCCC----HHHHHHHHHHcCCEEEEEccccccccccCccCC--
Confidence 1257788877632 3455665 77775 3333 99999999999999999999984 433443221
Q ss_pred ccCCCCchh--chhhhhcCCcccceeEEeC-HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh---ccHH
Q 010250 328 KYSIKPDLV--SFAKALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIV 401 (514)
Q Consensus 328 ~~gv~pDiv--~~sK~l~gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~ 401 (514)
... .+|++ +++|+|+| .++|+++++ +++++.+.... .++.+.+.++..++++.++++.+.+ +++.
T Consensus 213 ~~~-~~di~~~s~sK~l~g--~~~G~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~ 283 (407)
T 2dkj_A 213 PLP-YAHVVTSTTHKTLRG--PRGGLILSNDPELGKRIDKLI------FPGIQGGPLEHVIAGKAVAFFEALQPEFKEYS 283 (407)
T ss_dssp CTT-TCSEEEEESSGGGCC--CSCEEEEESCHHHHHHHHHHH------TTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred ccc-cccEEEEeccccCCC--CCceEEEECCHHHHHHHHhhh------cccccCCCcHHHHHHHHHHHHHHHHhhHHHHH
Confidence 112 26877 68999986 467999999 89988876421 2334455677777778888887643 4578
Q ss_pred HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---------
Q 010250 402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--------- 472 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--------- 472 (514)
++++++++++.+.|+++ ..++... ++.|.++.+.+..... ....+.+.|.++||++.++
T Consensus 284 ~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~gi~v~~~~~~~~~~~~ 351 (407)
T 2dkj_A 284 RLVVENAKRLAEELARR-GYRIVTG-GTDNHLFLVDLRPKGL----------TGKEAEERLDAVGITVNKNAIPFDPKPP 351 (407)
T ss_dssp HHHHHHHHHHHHHHHHT-TCEEGGG-SCSSSEEEEECGGGTC----------CHHHHHHHHHHTTEECEECCCTTCSSCT
T ss_pred HHHHHHHHHHHHHHHhC-CceeecC-CCCceEEEEECcccCC----------CHHHHHHHHHHcCceecCCcCccccccc
Confidence 88899999999999876 3332211 3457788888764210 1445778899999999863
Q ss_pred --CCEEEEeCCC----CCCHHHHHHHHHHHHHHHHH-----HHHHHHHhhh
Q 010250 473 --GDNIMMSPPF----IMSPEEVDELISKYGKALKA-----TEERVKELKS 512 (514)
Q Consensus 473 --g~~iRi~p~~----~~t~e~id~~~~~l~~~l~~-----~~~~~~~~~~ 512 (514)
.+.+|++++. .+|++|+++++++|++++++ +++++.++.+
T Consensus 352 ~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 402 (407)
T 2dkj_A 352 RVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLEGPSEALREEVRRLAL 402 (407)
T ss_dssp TTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred cCCCceeeecccccccCCCHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 2469999765 38999999999999999988 7777766644
No 111
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.93 E-value=1.4e-24 Score=228.12 Aligned_cols=358 Identities=14% Similarity=0.152 Sum_probs=214.3
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT 177 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~ 177 (514)
.|+.||||.+++++ |.|.+++.+++...... ++ ..+...+++++|+++++ .++++|++||++|++.
T Consensus 41 ~g~~ylD~~~~~~~-------~~v~~a~~~~~~~~~~~---y~-~~~~~~~l~~~la~~~~---~~~v~~t~ggt~A~~~ 106 (467)
T 1ax4_A 41 SSAVYIDLLTDSGT-------NAMSDHQWAAMITGDEA---YA-GSRNYYDLKDKAKELFN---YDYIIPAHQGRGAENI 106 (467)
T ss_dssp GGGCSEECSCSSSC-------CCEEHHHHHHHHTCCCC---SS-SCHHHHHHHHHHHHHHC---CCEEEEESSHHHHHHH
T ss_pred CCceeeecccCcCC-------HHHHHHHHHHHhhcccc---cc-cCccHHHHHHHHHHHcC---CCcEEEcCCcHHHHHH
Confidence 47889999888653 78888888887643211 11 34556789999999983 4799999999999999
Q ss_pred HHHHHHHHHhhcCCCCcc--EEEEEecCCc-ccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250 178 QVKLVWYYNNALGRPNKK--KFIARQKSYH-GSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~--~ii~~~~~yH-G~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
|+++++.++.. +++. .||+. .+| +.+...+...|........ +.......+..|.+ .
T Consensus 107 al~~~~~~~~~---~Gd~~~~viv~--~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~~~~~~~~-----------~ 166 (467)
T 1ax4_A 107 LFPVLLKYKQK---EGKAKNPVFIS--NFHFDTTAAHVELNGCKAINIVT----EKAFDSETYDDWKG-----------D 166 (467)
T ss_dssp HHHHHHHHHHH---TTCCSSCEEEE--SSCCHHHHHHHHHTTCEEEECBC----GGGGCTTSCCTTTT-----------C
T ss_pred HHHHHHHhhcc---CCCccceEEEe--ccccchhhHHHhccCCceecccc----cccccccccCCccc-----------c
Confidence 99998754322 2222 15554 455 5544444443332111000 00000000000110 0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC--c--------ccccccc
Q 010250 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA--F--------GRLGTMF 324 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG--~--------gr~G~~~ 324 (514)
.++++|++++.+...+++++|++++++|++|..+++.++|++|+++|++||++||+||++.. . +..|...
T Consensus 167 ~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~ 246 (467)
T 1ax4_A 167 FDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATI 246 (467)
T ss_dssp BCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCH
T ss_pred cCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCch
Confidence 12578888887543246899999999998855677789999999999999999999998752 0 2222110
Q ss_pred eecccC----CCCchh--chhhhhcCCcccceeEE-eC-H-HHHHHhhhccCCCCcccccCCCCCcHHHHHHHHH-HHHH
Q 010250 325 GCDKYS----IKPDLV--SFAKALSSAYMPIGAIL-VS-P-EVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIE-ALKI 394 (514)
Q Consensus 325 ~~~~~g----v~pDiv--~~sK~l~gG~~pig~v~-~~-~-~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~a-al~~ 394 (514)
...+ ..+|++ +++|+++ +|+|+++ ++ + ++++.+..... .+....++++++..+.++.+ +++.
T Consensus 247 --~~~~~~~~~~~d~~~~s~sK~~g---~~~Gg~~~~~d~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~~~l~~ 318 (467)
T 1ax4_A 247 --KEVIFDMYKYADALTMSAKKDPL---LNIGGLVAIRDNEEIFTLARQRCV---PMEGFVTYGGLAGRDMAAMVQGLEE 318 (467)
T ss_dssp --HHHHHHHGGGCSEEEEETTSTTC---CSSCEEEEESSCHHHHHHHHHHHH---HHTCSTTTTTCCHHHHHHHHHHHHH
T ss_pred --hhhhhhhccccceEEEeccccCC---CCcceEEEeCCHHHHHHHHHhhcc---ccccccccCCccchHHHHHHHHHHH
Confidence 0000 124665 4567664 4666544 56 5 78777643110 01112345555544443333 5665
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH-HHCCcEEEee-
Q 010250 395 YKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVS- 472 (514)
Q Consensus 395 ~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~- 472 (514)
+.+++..++..++++++.+.|++. +.+++... .|.++.+.+..-. +. .+........+...| .++||.+.+.
T Consensus 319 ~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~--~~~~~~~~~~~~~-~~--~~~~~~~~~~l~~~L~~~~gv~v~~~g 392 (467)
T 1ax4_A 319 GTEEEYLHYRIGQVKYLGDRLREA-GIPIQYPT--GGHAVFVDCKKLV-PQ--IPGDQFPAQAVINALYLESGVRAVEIG 392 (467)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHT-TCCBCSSC--CSSEEEEESTTTC-TT--SCGGGCHHHHHHHHHHHHHCEECEEES
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhC-CCCcccCC--CceEEEEehhhhc-cc--cccCCCCHHHHHHHHHHhcCceeeecC
Confidence 443345556667788888888763 33433222 2444455521100 00 000001245678888 8899998872
Q ss_pred ----------C-------CEEEEeCC-CCCCHHHHHHHHHHHHHHHHHH
Q 010250 473 ----------G-------DNIMMSPP-FIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 473 ----------g-------~~iRi~p~-~~~t~e~id~~~~~l~~~l~~~ 503 (514)
| +.|||++| ..+|++||++++++|+++++++
T Consensus 393 ~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~ 441 (467)
T 1ax4_A 393 SFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKF 441 (467)
T ss_dssp HHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHH
T ss_pred ccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHhh
Confidence 2 57999999 5599999999999999988764
No 112
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.93 E-value=3e-24 Score=218.93 Aligned_cols=322 Identities=15% Similarity=0.115 Sum_probs=219.0
Q ss_pred CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCC--CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCc
Q 010250 117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKM--AKVFFTNSGSEANDTQVKLVWYYNNALGRPNK 194 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~--~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~ 194 (514)
-+|+|++|+.+++... .. ....+...+++++++++++. .. +++++++||++|++ +++.+. .++
T Consensus 13 ~~~~v~~a~~~~~~~~--~~---~~~~~~~~~~~~~la~~~~~-~~~~~~v~~~~g~t~al~-~~~~~~--------~~g 77 (384)
T 3zrp_A 13 IKEDVLVAGLENNVGF--TS---KEFVEALAYSLKGLRYVMGA-SKNYQPLIIPGGGTSAME-SVTSLL--------KPN 77 (384)
T ss_dssp CCHHHHHHTTCCSCCT--TS---HHHHHHHHHHHHHHHHHHTC-CTTSEEEEEESCHHHHHH-HGGGGC--------CTT
T ss_pred CCHHHHHHhhcccccc--cc---HHHHHHHHHHHHHHHHHhCC-CCCCcEEEEcCCcHHHHH-HHHhhc--------CCC
Confidence 4788888887765421 11 11235567888999998853 33 78999999999999 887553 345
Q ss_pred cEEEEEecCCcccceeee-ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEE
Q 010250 195 KKFIARQKSYHGSTLIAA-SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIA 273 (514)
Q Consensus 195 ~~ii~~~~~yHG~t~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~a 273 (514)
++||+.+++||+.....+ ...|.. +..++.+..+. .++++|++.+.+ .+++
T Consensus 78 d~vi~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~~-------------~d~~~l~~~i~~---~~~~ 129 (384)
T 3zrp_A 78 DKILVVSNGVFGDRWEQIFKRYPVN------------VKVLRPSPGDY-------------VKPGEVEEEVRK---SEYK 129 (384)
T ss_dssp CEEEEECSSHHHHHHHHHHTTSSCE------------EEEECCSTTCC-------------CCHHHHHHHHHH---SCEE
T ss_pred CEEEEecCCcchHHHHHHHHHcCCc------------EEEecCCCCCC-------------CCHHHHHHHHHh---CCCc
Confidence 789999999998543222 111211 11122211110 125788888864 2588
Q ss_pred EEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCccccee
Q 010250 274 AFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGA 351 (514)
Q Consensus 274 avivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig~ 351 (514)
+|+++++++++|.+.| +++|.++|++||+++|+||+|+ +|.. .... ....+|+++ ++|+++|+ .++|+
T Consensus 130 ~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~~~~--~~~~--~~~~~d~~~~s~~K~~~~~-~g~g~ 199 (384)
T 3zrp_A 130 LVALTHVETSTGVREP----VKDVINKIRKYVELIVVDGVSS-VGAE--EVKA--EEWNVDVYLTASQKALGSA-AGLGL 199 (384)
T ss_dssp EEEEESEETTTTEECC----HHHHHHHHGGGEEEEEEECTTT-TTTS--CCCT--TTTTCSEEEEETTSTTCCC-SSEEE
T ss_pred EEEEeCCCCCCceECc----HHHHHHHHHhcCCEEEEECccc-ccCc--cccc--cccCCCEEEecCcccccCC-CceEE
Confidence 9999999999998887 9999999999999999999997 4322 1112 223467775 45999876 67999
Q ss_pred EEeCHHHHHHh-hhccCC--------C----Cccc--ccCCC-CCcHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHH
Q 010250 352 ILVSPEVSEVI-HSQSNT--------L----GSFS--HGFTY-SGHPVSCAVAIEALKIYKER---NIVEQVNKIAPKFQ 412 (514)
Q Consensus 352 v~~~~~i~~~l-~~~~~~--------~----~~~~--~~~t~-~~~pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l~ 412 (514)
+++++++++.+ ...... . ..+. ....+ +.++.++++..++++.+.+. ++.++++++++++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~ 279 (384)
T 3zrp_A 200 LLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIR 279 (384)
T ss_dssp EEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred EEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 99999998877 211000 0 0000 22223 44666777777888876543 57788899999999
Q ss_pred hhhhhccCCCceeEE--EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC----CEEEEeCCCCCCH
Q 010250 413 DGVKAFSDSPIIGEI--RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG----DNIMMSPPFIMSP 486 (514)
Q Consensus 413 ~~L~~l~~~~~~~~v--~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g----~~iRi~p~~~~t~ 486 (514)
+.|+++ ...+.... ...+.++.+.+... ....+.+.|.++||.+.++. +.||++++..+|+
T Consensus 280 ~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~gi~v~~g~~~~~~~iRi~~~~~~~~ 346 (384)
T 3zrp_A 280 AGLEAL-GLEIVARRPESYSNTVTGVILKVA------------DPQKVLAGTVNEGVEFAPGVHPAFKYFRIGHMGWVTP 346 (384)
T ss_dssp HHHHHT-TCCBSCSSGGGBCSSEEEEECSSS------------CHHHHHHHHHTTTCCCEECCCTTCCEEEEECCSSCCH
T ss_pred HHHHHC-CCeEccCcccccCccEEEEECCCC------------CHHHHHHHHHHCCEEEecCCCCCcCEEEEeccccCCH
Confidence 999876 33322211 12355666766531 14568899999999999876 7799999989999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 010250 487 EEVDELISKYGKALKATE 504 (514)
Q Consensus 487 e~id~~~~~l~~~l~~~~ 504 (514)
+|+++++++|+++++++.
T Consensus 347 e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 347 NDAIIAISVIERTLRKLG 364 (384)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 999999999999998754
No 113
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.93 E-value=2.8e-24 Score=223.61 Aligned_cols=347 Identities=8% Similarity=0.041 Sum_probs=218.7
Q ss_pred EEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcccccc-ccCCchHHHHHHHHHHhcC---cCCCCeEEEeC
Q 010250 94 VYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFW-NRTTKPSLDLAKELLEMFT---ASKMAKVFFTN 169 (514)
Q Consensus 94 ~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~-~~~~~~~~ela~~L~~~~~---~~~~~~v~~~~ 169 (514)
..+.+|+.+|||.+| .+.-..+|.|++|+.+++++....+... ..+.....+|.+.+++++. ....++++|++
T Consensus 50 ~~~~~~~~~i~l~~~---~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~ 126 (432)
T 3ei9_A 50 LLKYPDAQVISLGIG---DTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSD 126 (432)
T ss_dssp HHHCTTCCCEECSSC---CCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEES
T ss_pred hhcCCCCCeEEccCC---CCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHccCCCCcceEEECC
Confidence 344568899999988 4444589999999999998643222111 1123345678888887751 23457899999
Q ss_pred ChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCCh
Q 010250 170 SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETE 249 (514)
Q Consensus 170 sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (514)
|+++++..+..++ .+++.|++.+++|++.............+. ........+..+++...
T Consensus 127 G~~~al~~l~~l~---------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~---------- 186 (432)
T 3ei9_A 127 GAKCDISRLQVMF---------GSNVTIAVQDPSYPAYVDSSVIMGQTGQFN-TDVQKYGNIEYMRCTPE---------- 186 (432)
T ss_dssp CHHHHHHHHHHHH---------CTTCCEEEEESCCTHHHHHHHHHTCSCCEE-TTTTEETTCEEEECCGG----------
T ss_pred ChHHHHHHHHHHc---------CCCCEEEEeCCCCHHHHHHHHHcCCccccc-ccccccCceEEeccCcc----------
Confidence 9999998743332 245789999999999754443332211110 00000001111111100
Q ss_pred hHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceeccc
Q 010250 250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKY 329 (514)
Q Consensus 250 ~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~ 329 (514)
..+ ..++++ . .++.+|+++..++++|.+. +.+.|++|.++|++||+++|+||+|++|...+.......+
T Consensus 187 ~~~----~~~l~~-----~-~~~~~v~l~~p~NPtG~~~-~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~ 255 (432)
T 3ei9_A 187 NGF----FPDLST-----V-GRTDIIFFCSPNNPTGAAA-TREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEI 255 (432)
T ss_dssp GTT----SCCGGG-----C-CCCSEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGS
T ss_pred cCC----cCChhh-----C-CCCCEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhc
Confidence 000 011221 1 2344455555567777654 5678999999999999999999999988555443222222
Q ss_pred -C---CCCchhchhhhhc-CCcccceeEEeCHHH--------HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH-
Q 010250 330 -S---IKPDLVSFAKALS-SAYMPIGAILVSPEV--------SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY- 395 (514)
Q Consensus 330 -g---v~pDiv~~sK~l~-gG~~pig~v~~~~~i--------~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~- 395 (514)
+ ....+.++||.++ .| +++|++++++++ ++.+.. .....+++.++++++++.++++..
T Consensus 256 ~~~~~~~i~~~S~SK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~ 327 (432)
T 3ei9_A 256 PGAEEVAMETASFSNYAGFTG-VRLGWTVIPKKLLYSDGFPVAKDFNR-------IICTCFNGASNISQAGALACLTPEG 327 (432)
T ss_dssp TTGGGTEEEEEESHHHHCTTT-TCCEEEECCTTCBCTTSCBHHHHHHH-------HHHHSCCCSCHHHHHHHHHHSSHHH
T ss_pred CCCCCeEEEEecchhccCCcc-cceEEEEEChHHhhcchHHHHHHHHH-------HhccccCCCCHHHHHHHHHHHhccc
Confidence 1 1122447999998 45 899999999887 566542 122345567889999888887521
Q ss_pred h--hccHHHHHHHHHHHHHhhhhhccCCCceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEe
Q 010250 396 K--ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRV 471 (514)
Q Consensus 396 ~--~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~ 471 (514)
. -+++.++++++.+++++.|+++ .... .. ..|.++++.+.... ...+...|++ .||++.+
T Consensus 328 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~---~~~~~~~~~~~~~~~~~------------~~~~~~~ll~~~gv~v~~ 391 (432)
T 3ei9_A 328 LEAMHKVIGFYKENTNIIIDTFTSL-GYDV---YGGKNAPYVWVHFPNQS------------SWDVFAEILEKTHVVTTP 391 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT-TCCE---EECSSSSEEEEECTTSC------------HHHHHHHHHHHHCEECEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC-Ccee---cCCCcceEEEEECCCCC------------HHHHHHHHHHHCCEEEeC
Confidence 1 1456778888889999988876 2222 22 24667777775211 3346666665 5999986
Q ss_pred e-------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 472 S-------GDNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 472 ~-------g~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
+ .+.|||+ +..++++|++++++|++.-
T Consensus 392 g~~f~~~~~~~iRis--~~~~~e~l~~~l~rl~~~~ 425 (432)
T 3ei9_A 392 GSGFGPGGEGFVRVS--AFGHRENILEACRRFKQLY 425 (432)
T ss_dssp GGGGCGGGTTEEEEE--CCSCHHHHHHHHHHHHHHH
T ss_pred chHhCCCCCCEEEEE--ecCCHHHHHHHHHHHHHHh
Confidence 4 3579999 6789999999999998653
No 114
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.92 E-value=8.5e-25 Score=223.76 Aligned_cols=324 Identities=14% Similarity=0.126 Sum_probs=218.2
Q ss_pred CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccE
Q 010250 117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 196 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ 196 (514)
.+|+|++|+.+++.. +++. ...+...+++++++++++....+++++++||++|++.+++.+. .++++
T Consensus 34 ~~~~v~~a~~~~~~~--~~~~---~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~--------~~gd~ 100 (393)
T 3kgw_A 34 LAPRVLAAGSLRMIG--HMQK---EMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLL--------EPGDS 100 (393)
T ss_dssp CCHHHHHHTTCCCCC--TTSH---HHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHC--------CTTCE
T ss_pred CCHHHHHHhcccccC--cccH---HHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcC--------CCCCE
Confidence 578888888765422 1111 1234567889999998854433469999999999999999773 34578
Q ss_pred EEEEecCCcccce-eeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEE
Q 010250 197 FIARQKSYHGSTL-IAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAF 275 (514)
Q Consensus 197 ii~~~~~yHG~t~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aav 275 (514)
|++...+|||... ......|... ..++.+..+ ..++++|++.+.+. ++++|
T Consensus 101 vl~~~~~~~~~~~~~~~~~~g~~~------------~~~~~~~~~-------------~~d~~~l~~~i~~~---~~~~v 152 (393)
T 3kgw_A 101 FLTGTNGIWGMRAAEIADRIGARV------------HQMIKKPGE-------------HYTLQEVEEGLAQH---KPVLL 152 (393)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCEE------------EEEECCTTC-------------CCCHHHHHHHHHHH---CCSEE
T ss_pred EEEEeCCchhHHHHHHHHHcCCce------------EEEeCCCCC-------------CCCHHHHHHHHhhC---CCcEE
Confidence 9998888876431 1111222111 111111110 01257888888642 46788
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeEE
Q 010250 276 IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAIL 353 (514)
Q Consensus 276 ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~ 353 (514)
+++++++.+|.+.+ +++|+++|++||+++|+||+|+ +| +..+..+.+ .+|+++++ |+++|+ .++|+++
T Consensus 153 ~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~-~g--~~~~~~~~~--~~d~~~~s~sK~~~~~-~g~g~~~ 222 (393)
T 3kgw_A 153 FLVHGESSTGVVQP----LDGFGELCHRYQCLLLVDSVAS-LG--GVPIYMDQQ--GIDIMYSSSQKVLNAP-PGISLIS 222 (393)
T ss_dssp EEESEETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-TT--TSCCCTTTT--TCCEEEEESSSTTCCC-SSCEEEE
T ss_pred EEeccCCcchhhcc----HHHHHHHHHHcCCEEEEECCcc-cc--Ccccchhhc--CCCEEEecCcccccCC-CceeEEE
Confidence 88888999998877 8999999999999999999997 43 112333333 35776655 999876 6799999
Q ss_pred eCHHHHHHhhhccCCCCcc----------------cccCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhh
Q 010250 354 VSPEVSEVIHSQSNTLGSF----------------SHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDG 414 (514)
Q Consensus 354 ~~~~i~~~l~~~~~~~~~~----------------~~~~t~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~ 414 (514)
+++++++.+.........+ ....+++.++.+++++.++++.+.+ +++.++++++++++.+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 302 (393)
T 3kgw_A 223 FNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKH 302 (393)
T ss_dssp ECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred ECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 9999999886432111111 0112345578888888888887765 45688899999999999
Q ss_pred hhhccCCCcee-E-EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee-----CCEEEEeC-CCCCC
Q 010250 415 VKAFSDSPIIG-E-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS-----GDNIMMSP-PFIMS 485 (514)
Q Consensus 415 L~~l~~~~~~~-~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~-----g~~iRi~p-~~~~t 485 (514)
|+++ ...... . ....+.+..+.+.+.. ....+.+.|+++ ||++.++ ++.+|+++ ++.+|
T Consensus 303 L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~ 370 (393)
T 3kgw_A 303 LQEM-GLKFFVKDPEIRLPTITTVTVPAGY-----------NWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNAT 370 (393)
T ss_dssp HHHT-TCCBSSSSGGGBCSSEEEEECCTTB-----------CHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCC
T ss_pred HHHc-CCeeccCChhhcCCeEEEEeCCCCC-----------CHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCC
Confidence 9886 322211 1 1122455566664321 145688888888 9999863 36799998 77789
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 010250 486 PEEVDELISKYGKALKAT 503 (514)
Q Consensus 486 ~e~id~~~~~l~~~l~~~ 503 (514)
++|+++++++|+++++++
T Consensus 371 ~~~i~~~~~~l~~~l~~~ 388 (393)
T 3kgw_A 371 TENVDRVAEALREALQHC 388 (393)
T ss_dssp HHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999998764
No 115
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.92 E-value=7.9e-25 Score=226.67 Aligned_cols=345 Identities=9% Similarity=0.040 Sum_probs=217.7
Q ss_pred CCEEEEccCCcccccCCC--CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-CCCC---eEEEeCChh
Q 010250 99 GKKYLDSLAGLWCTALGG--SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKMA---KVFFTNSGS 172 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh--~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~---~v~~~~sGs 172 (514)
|+.+|||..|....+-++ .+|.|.+++.+........+. +.....++.+.+++++.. .+.+ ++++++||+
T Consensus 37 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~----~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~ 112 (418)
T 3rq1_A 37 RENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEHVGYA----PIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGT 112 (418)
T ss_dssp GGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHHHSCC----CTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHH
T ss_pred CCCeEECCCCcccCCCCCccccHHHHHHHHHhcccccCCCC----CCCChHHHHHHHHHHHhcccCccccccEEECCchH
Confidence 557788877743211222 467777776553321111111 111234455555554311 1245 899999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC-CCcccCCCCCCChhH
Q 010250 173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC-PHYWRYAHPGETEEE 251 (514)
Q Consensus 173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 251 (514)
+|+..+++... ..+++|++.+++|++........+.... .+++ +..|.
T Consensus 113 ~al~~~~~~l~--------~~gd~Vl~~~p~~~~~~~~~~~~g~~~~-------------~v~~~~~~~~---------- 161 (418)
T 3rq1_A 113 GGIHHLIHNYT--------EPGDEVLTADWYWGAYRVICSDTGRTLV-------------TYSLFDEHNN---------- 161 (418)
T ss_dssp HHHHHHHHHHS--------CTTCEEEEESSCCTHHHHHHHHTTCEEE-------------EECSBCTTSS----------
T ss_pred HHHHHHHHHhc--------CCCCEEEECCCCchhHHHHHHHcCCEEE-------------EEeeeCCCCC----------
Confidence 99999998763 3357899999999987644333222111 1111 00011
Q ss_pred HHHHHHHHHHHHHHHh-CCCcEEEEEEc-cccCCCCcccCChhHHHHHHHHHH------hcCCEEEEechhcCcccccc-
Q 010250 252 YSTRLANNLEDLILKE-GPETIAAFIAE-PVIGAGGVIPPPATYFEKVQAVVK------KYDILFIADEVICAFGRLGT- 322 (514)
Q Consensus 252 ~~~~~~~~le~li~~~-~~~~~aavivE-pv~~~~G~~~p~~~~L~~l~~l~~------~~gillI~DEv~tG~gr~G~- 322 (514)
.++++|++.+.+. .++..++++++ |.++++|.+. +.+.+++|.++|+ +||+++|+||+|.+|++.|.
T Consensus 162 ---~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~-~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~ 237 (418)
T 3rq1_A 162 ---FNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSI-EDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDE 237 (418)
T ss_dssp ---BCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCC-CHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHH
T ss_pred ---cCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHH
Confidence 1157777777542 11234456665 5377888665 5567999999999 89999999999999987764
Q ss_pred --cceecccCCCCch---h--chhhhhcCCcccceeEEe---CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHH
Q 010250 323 --MFGCDKYSIKPDL---V--SFAKALSSAYMPIGAILV---SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEAL 392 (514)
Q Consensus 323 --~~~~~~~gv~pDi---v--~~sK~l~gG~~pig~v~~---~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal 392 (514)
.+.....++.+|+ + +|||.++.+++++|++++ ++++++.+..... ....+.....++++++++.++|
T Consensus 238 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~~l 314 (418)
T 3rq1_A 238 VRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNK---STSRATWSNICRPAMRTMANIV 314 (418)
T ss_dssp HHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHH---HHHHHHTSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHH---HHHhhccCCCchHHHHHHHHHh
Confidence 2233444566663 2 689998754489999999 9999888864210 0011122356788888887777
Q ss_pred HHH------hh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH
Q 010250 393 KIY------KE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK 464 (514)
Q Consensus 393 ~~~------~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 464 (514)
+.. .+ +++.++++++.+++.+.|+++ ...+.. ...|.++++.+.+ ...+.+.|.+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~~--------------~~~~~~~l~~ 377 (418)
T 3rq1_A 315 ADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV-GLPMLP--YRGGFFITIPTDS--------------ANAICEELKK 377 (418)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCCCC--CCSSSEEEEECTT--------------HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCC--CCceEEEEcCCCC--------------HHHHHHHHHh
Confidence 432 11 245677888888888888876 333221 1123344444321 3457788999
Q ss_pred CCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 465 HGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 465 ~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+||++.++++.+||+.. .+++++|++++++|+++++++
T Consensus 378 ~gi~v~~g~~~iRis~~-~~~~~~i~~~~~~l~~~l~~~ 415 (418)
T 3rq1_A 378 EHIYVIALANGIRIAAC-GIPKCQMTGLAEKIYNAMKSL 415 (418)
T ss_dssp TTEECEECSSEEEEEGG-GSCHHHHTTHHHHHHHHHHHT
T ss_pred CCEEEecCCCCeEEEEe-cCCHHHHHHHHHHHHHHHHHH
Confidence 99999998889999943 369999999999999998764
No 116
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.92 E-value=9.4e-24 Score=218.33 Aligned_cols=347 Identities=11% Similarity=0.055 Sum_probs=219.9
Q ss_pred CEEEEccCCcccc-cCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-----------cCCCCeEEE
Q 010250 100 KKYLDSLAGLWCT-ALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-----------ASKMAKVFF 167 (514)
Q Consensus 100 ~~ylD~~s~~~~~-~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-----------~~~~~~v~~ 167 (514)
+.+|||.+|.... +-.+.+|++.+++.+++++.... . +. ......++.+.+++++. ..+.++|++
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~-~-y~-~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~ 109 (416)
T 1bw0_A 33 KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECN-G-YF-PTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVL 109 (416)
T ss_dssp SCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSS-S-CC-CTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEE
T ss_pred CCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccC-C-cC-CCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEE
Confidence 5689998885432 12347899999999998753211 0 11 11223456666665553 024678999
Q ss_pred eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC--cccCCCC
Q 010250 168 TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH--YWRYAHP 245 (514)
Q Consensus 168 ~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 245 (514)
++||++|++.+++.+. .++++|++.+++||+....... .|.... .++... .|.
T Consensus 110 ~~g~~~al~~~~~~l~--------~~gd~vl~~~p~y~~~~~~~~~-~g~~~~------------~v~~~~~~~~~---- 164 (416)
T 1bw0_A 110 CSGGSHGILMAITAIC--------DAGDYALVPQPGFPHYETVCKA-YGIGMH------------FYNCRPENDWE---- 164 (416)
T ss_dssp ESHHHHHHHHHHHHHC--------CTTCEEEEEESCCTHHHHHHHH-TTCEEE------------EEEEEGGGTTE----
T ss_pred eCChHHHHHHHHHHhC--------CCCCEEEEcCCCcHhHHHHHHH-cCcEEE------------EeecCcccCCC----
Confidence 9999999999998873 2347899999999997543322 221110 011000 000
Q ss_pred CCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc---
Q 010250 246 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--- 322 (514)
Q Consensus 246 ~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~--- 322 (514)
.++++|++.+. ++..++++++| ++++|.+ .+++++++|.++|++||+++|+||+|+++.+.|.
T Consensus 165 ---------~d~~~l~~~l~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~ 230 (416)
T 1bw0_A 165 ---------ADLDEIRRLKD---DKTKLLIVTNP-SNPCGSN-FSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPN 230 (416)
T ss_dssp ---------ECHHHHHHHCC---TTEEEEEEESS-CTTTCCC-CCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTT
T ss_pred ---------CCHHHHHHHhc---cCCeEEEEeCC-CCCCCcc-cCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCC
Confidence 11466776654 23345556666 6667765 4678999999999999999999999998876664
Q ss_pred -cc-eecccCCCCc-h--hchhhhhcCCcccceeEEeCHH--HHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH
Q 010250 323 -MF-GCDKYSIKPD-L--VSFAKALSSAYMPIGAILVSPE--VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY 395 (514)
Q Consensus 323 -~~-~~~~~gv~pD-i--v~~sK~l~gG~~pig~v~~~~~--i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~ 395 (514)
.+ ....++..++ + .++||.++.+++++|+++++++ +++.+.... .. .+..+++.|+++++++.++|+..
T Consensus 231 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~a~~~~l~~~ 306 (416)
T 1bw0_A 231 ATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGL---KR-VGMLVCGPCTVVQAALGEALLNT 306 (416)
T ss_dssp CCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHH---HH-HHHHHTCSCHHHHHHHHHHHHSS
T ss_pred CCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhHHHHHHHH---HH-HhccccCCCcHHHHHHHHHHhcc
Confidence 22 2222222222 2 3689997654489999998663 444333100 00 12246778899999999988742
Q ss_pred hh---ccHHHHHHHHHHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEE
Q 010250 396 KE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVR 470 (514)
Q Consensus 396 ~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~ 470 (514)
.+ ++..++++++.+++.+.|+++ +.+..+.+ .|.++++.+.....+ ... ....+...|+ ++||++.
T Consensus 307 ~~~~~~~~~~~~~~~~~~l~~~L~~~---~g~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~l~~~~gi~v~ 377 (416)
T 1bw0_A 307 PQEHLDQIVAKIEESAMYLYNHIGEC---IGLAPTMPRGAMYLMSRIDLEKYR-----DIK-TDVEFFEKLLEEENVQVL 377 (416)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTS---TTEEECCCCBTTEEEEEECGGGBS-----SCC-SHHHHHHHHHHHHCEECE
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhC---CCCcccCCCeeEEEEEeCCHHHcC-----CCC-CHHHHHHHHHHHCCEEEe
Confidence 22 345677888888888888765 33332323 366677777532100 000 1345777774 8899998
Q ss_pred ee-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 471 VS-----GDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 471 ~~-----g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
++ .+.+|+++ ..++++|++++++|.+++++.
T Consensus 378 ~g~~f~~~~~iRis~--~~~~e~l~~~l~~l~~~l~~~ 413 (416)
T 1bw0_A 378 PGTIFHAPGFTRLTT--TRPVEVYREAVERIKAFCQRH 413 (416)
T ss_dssp EGGGGTCTTEEEEEC--CSCHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCeEEEEe--cCCHHHHHHHHHHHHHHHHHh
Confidence 75 35799996 578999999999999988653
No 117
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.92 E-value=2.1e-24 Score=222.31 Aligned_cols=336 Identities=11% Similarity=0.069 Sum_probs=215.8
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccc-cCCchHHHHHHHHHHhcC-c-CCCCeEEEeCChhHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWN-RTTKPSLDLAKELLEMFT-A-SKMAKVFFTNSGSEA 174 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~-~~~~~~~ela~~L~~~~~-~-~~~~~v~~~~sGseA 174 (514)
.|+.+|||.++.. .++ .+|.|.+++.++++.........+ .+.....++.+.|++++. + ...++|++++|+++|
T Consensus 31 ~~~~~i~l~~~~~--~~~-~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~a 107 (400)
T 3asa_A 31 PQHTVINLSIGDT--TQP-LNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFYRGFVDAKEIFISDGAKVD 107 (400)
T ss_dssp TTSCCEECSSCCC--CCC-CCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHH
T ss_pred CCCceEeccCCCC--CCC-CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHcCCCCHHHEEEccChHHH
Confidence 3678999987743 344 689999999998875321111111 123345788899998841 2 345789999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250 175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254 (514)
Q Consensus 175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
++.+++++ .++++|++.+++|++....... .|... +..++.... ..+.
T Consensus 108 l~~~~~~~---------~~gd~Vl~~~p~y~~~~~~~~~-~g~~~-----------~~~~~~~~~--~~~~--------- 155 (400)
T 3asa_A 108 LFRLLSFF---------GPNQTVAIQDPSYPAYLDIARL-TGAKE-----------IIALPCLQE--NAFF--------- 155 (400)
T ss_dssp HHHHHHHH---------CSSCEEEEEESCCHHHHHHHHH-TTCSE-----------EEEEECCGG--GTTC---------
T ss_pred HHHHHHHc---------CCCCEEEECCCCcHHHHHHHHH-cCCcc-----------eEecccchh--cCcc---------
Confidence 99876543 2347899999999987533222 22210 001111100 0000
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-ceecccCCCC
Q 010250 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGCDKYSIKP 333 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~~~~gv~p 333 (514)
.++++ . +++++|+++..++++|.+ .+.+.+++|.++|++||+++|+||+|++|++.|.. .....++..+
T Consensus 156 ---~~l~~----~--~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 225 (400)
T 3asa_A 156 ---PEFPE----D--THIDILCLCSPNNPTGTV-LNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDAR 225 (400)
T ss_dssp ---CCCCT----T--CCCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGG
T ss_pred ---cChhh----c--cCccEEEEeCCCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCC
Confidence 01111 1 245566666667778876 46789999999999999999999999988766542 2222222123
Q ss_pred c----hhchhhhhc-CCcccceeEEeCHHH-------HHHhhhccCCCCcccccCCC-CCcHHHHHHHHHHHHHHhhccH
Q 010250 334 D----LVSFAKALS-SAYMPIGAILVSPEV-------SEVIHSQSNTLGSFSHGFTY-SGHPVSCAVAIEALKIYKERNI 400 (514)
Q Consensus 334 D----iv~~sK~l~-gG~~pig~v~~~~~i-------~~~l~~~~~~~~~~~~~~t~-~~~pl~~aaa~aal~~~~~~~~ 400 (514)
| +.++||.++ .| +++|++++++++ ++.+... .+..++ +.++++++++.++|+....+++
T Consensus 226 ~~~i~~~s~sK~~g~~G-lriG~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 297 (400)
T 3asa_A 226 FCAIEINSFSKPLGFAG-IRLGWTVIPQELTYADGHFVIQDWER-------FLSTTFNGASIPAQEAGVAGLSILPQLEA 297 (400)
T ss_dssp GTEEEEEECCGGGTTTT-CCCEEEECCTTCBCTTSCBHHHHHHH-------HHHHHCCCCCHHHHHHHHHHHHHTTTCHH
T ss_pred CceEEEecchhhcCCcc-hheeEEeeChhhccchhhhHHHHHHH-------HhccCccCCChHHHHHHHHHhCcHHHHHH
Confidence 4 457899997 55 899999999887 5554321 122334 5788889888888875433567
Q ss_pred HHHHHHHHHHHHhhhhhccCCCceeEEEe-eeeeEEEE-EccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee-----
Q 010250 401 VEQVNKIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTE-FADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS----- 472 (514)
Q Consensus 401 ~~~~~~~~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~----- 472 (514)
.++++++++++.+.|+++ . + ....+ .|.++++. +.+... ...+...|++ +||++.++
T Consensus 298 ~~~~~~~~~~l~~~L~~~-g--~-~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~~gv~v~~g~~f~~ 362 (400)
T 3asa_A 298 IHYYRENSDLLRKALLAT-G--F-EVFGGEHAPYLWVKPTQANIS-----------DRDLFDFFLREYHIAITPGIGFGR 362 (400)
T ss_dssp HHHHHHHHHHHHHHHHHT-T--C-EEEECSSSSEEEEECCCTTCC-----------TTTHHHHHHHHHSEECEEGGGGCG
T ss_pred HHHHHHHHHHHHHHHHHC-C--C-eeeCCCCceEEEEeccCCCCC-----------HHHHHHHHHHhCCEEEeChhHhCC
Confidence 888999999999999875 2 2 22233 36677777 542211 1125566664 59999864
Q ss_pred --CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 473 --GDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 473 --g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
.+.|||+ +..++++|++++++|++++++.
T Consensus 363 ~~~~~iRis--~~~~~e~i~~~l~~l~~~~~~~ 393 (400)
T 3asa_A 363 SGSGFVRFS--SLGKREDILAACERLQMAPALQ 393 (400)
T ss_dssp GGTTCEEEE--CCSCHHHHHHHHHHHHC-----
T ss_pred CCCCEEEEE--eeCCHHHHHHHHHHHHHHHHhh
Confidence 2569999 6889999999999999888654
No 118
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.92 E-value=3.7e-24 Score=221.22 Aligned_cols=342 Identities=16% Similarity=0.144 Sum_probs=226.6
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcC-Ccccc--cc-ccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTL-PFYHS--FW-NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE 173 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~-~~~~~--~~-~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse 173 (514)
+|+.|||+.+ .|+.+|+|.+++.+++++. ..... .+ .+..+...+++++|+++++. +.++++|++||++
T Consensus 27 ~~~~yld~~~------~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~-~~~~v~~~~g~t~ 99 (416)
T 1qz9_A 27 EGVIYLDGNS------LGARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGA-RDGEVVVTDTTSI 99 (416)
T ss_dssp TTCEECCTTT------SCCCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTC-CTTSEEECSCHHH
T ss_pred CCeEeecCCC------cCCCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCC-CcccEEEeCChhH
Confidence 4788999854 3578999999999999753 11111 11 01235667899999998843 4578999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee-cCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250 174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS-LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY 252 (514)
Q Consensus 174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (514)
+++.+++.++..... +.++ +++|+.++.+|+.+...+. +.... ..+. .+..++.
T Consensus 100 al~~al~~~~~~~~~-~~~g-d~vii~~~~~~~~~~~~~~~~~~~~--~~g~-----~~~~v~~---------------- 154 (416)
T 1qz9_A 100 NLFKVLSAALRVQAT-RSPE-RRVIVTETSNFPTDLYIAEGLADML--QQGY-----TLRLVDS---------------- 154 (416)
T ss_dssp HHHHHHHHHHHHHHH-HSTT-CCEEEEETTSCHHHHHHHHHHHHHH--CSSC-----EEEEESS----------------
T ss_pred HHHHHHHhhcccccc-cCCC-CcEEEEcCCCCCchHHHHHHHHHHh--cCCc-----eEEEeCc----------------
Confidence 999999877422100 0133 3577778888886433221 10000 0000 0111111
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCC
Q 010250 253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK 332 (514)
Q Consensus 253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~ 332 (514)
+++|++.+. +++++|+++++++++|.+.+ +++|.++|++||+++|+||+|+ +|... .....+ .
T Consensus 155 ----~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~g~~~--~~~~~~--~ 217 (416)
T 1qz9_A 155 ----PEELPQAID----QDTAVVMLTHVNYKTGYMHD----MQALTALSHECGALAIWDLAHS-AGAVP--VDLHQA--G 217 (416)
T ss_dssp ----GGGHHHHCS----TTEEEEEEESBCTTTCBBCC----HHHHHHHHHHHTCEEEEECTTT-TTTSC--CCHHHH--T
T ss_pred ----HHHHHHHhC----CCceEEEEeccccCcccccC----HHHHHHHHHHcCCEEEEEcccc-ccCcC--CChhhc--C
Confidence 256666653 36789999999999999887 9999999999999999999997 55442 122222 3
Q ss_pred Cchhch--hhhhcCCcccc-eeEEeCHHHHHHhhhccCCC-Cc---------c-----cccC-CCCCcHHHHHHHHHHHH
Q 010250 333 PDLVSF--AKALSSAYMPI-GAILVSPEVSEVIHSQSNTL-GS---------F-----SHGF-TYSGHPVSCAVAIEALK 393 (514)
Q Consensus 333 pDiv~~--sK~l~gG~~pi-g~v~~~~~i~~~l~~~~~~~-~~---------~-----~~~~-t~~~~pl~~aaa~aal~ 393 (514)
+|++++ +|.+++| .++ |++++++++++.+....... +. + .... ..+.++.+++++.++++
T Consensus 218 ~d~~~~s~~K~l~~g-~~~~g~l~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~ 296 (416)
T 1qz9_A 218 ADYAIGCTYKYLNGG-PGSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLD 296 (416)
T ss_dssp CSEEEECSSSTTCCC-TTCCCEEEECTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHH
T ss_pred CCEEEecCcccCCCC-CCCeEEEEECHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHH
Confidence 788765 5998776 677 99999999877665310000 00 0 0112 23457788888888999
Q ss_pred HHhhc---cHHHHHHHHHHHHHhhhhhc-c--CCCceeEEE--eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC
Q 010250 394 IYKER---NIVEQVNKIAPKFQDGVKAF-S--DSPIIGEIR--GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH 465 (514)
Q Consensus 394 ~~~~~---~~~~~~~~~~~~l~~~L~~l-~--~~~~~~~v~--g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 465 (514)
.+.++ ++.++++++++++.+.|+++ . +..+..... ..+.++.+.+.+ ...+.+.|.++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--------------~~~l~~~l~~~ 362 (416)
T 1qz9_A 297 VFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE--------------GYAVIQALIDR 362 (416)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTT--------------HHHHHHHHHTT
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCC--------------HHHHHHHHHhC
Confidence 87643 46788899999999999875 3 222221110 135566666532 34578889999
Q ss_pred CcEEEee-CCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHH
Q 010250 466 GMLVRVS-GDNIMMSPP-FIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 466 Gv~~~~~-g~~iRi~p~-~~~t~e~id~~~~~l~~~l~~~ 503 (514)
||.+... .+.+|++++ +.+|++|+++++++|++++++.
T Consensus 363 gi~~~~~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~~ 402 (416)
T 1qz9_A 363 GVIGDYREPRIMRFGFTPLYTTFTEVWDAVQILGEILDRK 402 (416)
T ss_dssp TEECEEETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CcEeccCCCCeEEEeCcccCCCHHHHHHHHHHHHHHHhcc
Confidence 9998764 467999987 6899999999999999988653
No 119
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.92 E-value=5e-25 Score=231.52 Aligned_cols=360 Identities=14% Similarity=0.121 Sum_probs=209.1
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ 178 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A 178 (514)
|+.||||.+++++ |+|++|+.+++..... .+ ...+...++++++++++ +.++++|++||++|++.|
T Consensus 40 ~~~ylD~~~~~~~-------~~v~~a~~~~l~~~~~---~y-~~~~~~~~l~~~la~~~---~~~~v~~t~~gt~A~~~a 105 (467)
T 2oqx_A 40 EDVFIDLLTDSGT-------GAVTQSMQAAMMRGDE---AY-SGSRSYYALAESVKNIF---GYQYTIPTHQGRGAEQIY 105 (467)
T ss_dssp GGCSEECSCCSSC-------SCCCHHHHHHTTSCCC---CS-SSCHHHHHHHHHHHHHH---CCSEEEEEC--CCSHHHH
T ss_pred CCeeEecccCCCc-------HHHHHHHHHHhccCcc---ee-ccCchhHHHHHHHHHHh---CcCcEEEcCCcHHHHHHH
Confidence 6789999887653 8999999988864321 11 23455678999999998 347999999999999999
Q ss_pred HHHHHHHH-hhcCCCCccEEEEEecCCcccceeeeec-CCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHH
Q 010250 179 VKLVWYYN-NALGRPNKKKFIARQKSYHGSTLIAASL-SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 256 (514)
Q Consensus 179 lk~a~~~~-~~~~~~~~~~ii~~~~~yHG~t~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (514)
+++++..+ ...|.+++++||.. .||+.+...... .+.... .... +.......+..+.+ ..+
T Consensus 106 l~~~~~~~~~~~G~~~~d~Ii~~--~~h~~t~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~-----------~~d 168 (467)
T 2oqx_A 106 IPVLIKKREQEKGLDRSKMVAFS--NYFFDTTQGHSQINGCTVR-NVYI---KEAFDTGVRYDFKG-----------NFD 168 (467)
T ss_dssp HHHHHHHHHHHHCCCTTTCEEEE--SSCCHHHHHHHHHTTCEEE-ECBC---TTTTCTTSCCTTTT-----------CBC
T ss_pred HHHHhccccccCCCCccceEEec--ccccccchhhhhccCccee-eccc---cccccCCCCCCccC-----------CcC
Confidence 99987431 11121211456654 688654222111 111110 0000 00000000000000 012
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC----------ccccccc---
Q 010250 257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA----------FGRLGTM--- 323 (514)
Q Consensus 257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG----------~gr~G~~--- 323 (514)
+++|++++.+...+++++|+++++++++|..+++.++|++|+++|++||++||+|++|.. .+..|..
T Consensus 169 ~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~ 248 (467)
T 2oqx_A 169 LEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQ 248 (467)
T ss_dssp HHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHH
T ss_pred HHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHH
Confidence 578888887533236889999999888644667789999999999999999999976642 1333321
Q ss_pred ceecccCCCCch--hchhhhhcCCcccce-eEEeCHH-HHHHhhhccCCCCcccccCCCCCcHHHHHHHHH-HHHHHhhc
Q 010250 324 FGCDKYSIKPDL--VSFAKALSSAYMPIG-AILVSPE-VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIE-ALKIYKER 398 (514)
Q Consensus 324 ~~~~~~gv~pDi--v~~sK~l~gG~~pig-~v~~~~~-i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~a-al~~~~~~ 398 (514)
+..+.+ ..+|+ .+++|+++ .|+| +++++++ +++.+..............+++..+..+.++++ .++...++
T Consensus 249 ~~~~~~-~~~d~~~~s~sK~~g---~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~~ 324 (467)
T 2oqx_A 249 ITRETY-KYADMLAMSAKKDAM---VPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNL 324 (467)
T ss_dssp HHHHHG-GGCSEEEEESSSTTC---CSSCEEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTCH
T ss_pred Hhhhhh-ccCCeEEEecccccC---CCCceEEEecChhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhhH
Confidence 110000 11454 46779885 3555 4556666 444332110000000011223333332222332 22322222
Q ss_pred cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEcc--CCCCCCCCCCccch-HHHHHHHH-HHCCcEEEeeC-
Q 010250 399 NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFAD--NKSPNEPFPPEWGI-GAYFGAQC-EKHGMLVRVSG- 473 (514)
Q Consensus 399 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~--~~~~~~~~~~~~~~-~~~~~~~l-~~~Gv~~~~~g- 473 (514)
+..++..++++++.+.|+++ +.+++ . ..|.++.+.+.. .... .... ...+...| .++||.+.+.+
T Consensus 325 ~~~~~~~~~~~~l~~~L~~~-~~~~~-~--~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~L~~~~gv~~~~~~~ 394 (467)
T 2oqx_A 325 DWLAYRIAQVQYLVDGLEEI-GVVCQ-Q--AGGHAAFVDAGKLLPHIP------ADQFPAQALACELYKVAGIRAVEIGS 394 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCCEE-E--ECSSCEEEEHHHHSTTSC------GGGCHHHHHHHHHHHHHCEECEEESH
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCeee-c--CCceEEEEechhhcccCC------cccccHHHHHHHHHHhcCceeccccc
Confidence 35566778889999999886 44544 3 345566676642 1110 0112 44567888 88999988733
Q ss_pred -----------------CEEEEeCCCC-CCHHHHHHHHHHHHHHHHHH
Q 010250 474 -----------------DNIMMSPPFI-MSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 474 -----------------~~iRi~p~~~-~t~e~id~~~~~l~~~l~~~ 503 (514)
+.|||+++.. +|+++|++++++|+++++++
T Consensus 395 ~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~~ 442 (467)
T 2oqx_A 395 FLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENA 442 (467)
T ss_dssp HHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHSG
T ss_pred ccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhhh
Confidence 5799999998 99999999999999998754
No 120
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.92 E-value=2.4e-24 Score=217.57 Aligned_cols=329 Identities=13% Similarity=0.055 Sum_probs=209.0
Q ss_pred EEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHH
Q 010250 102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKL 181 (514)
Q Consensus 102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~ 181 (514)
++||.++ ..|+.+|+|.+++.+++...... .+..+...+++++++++++ .+.++++|++||++|++.+++.
T Consensus 15 ~i~l~~~----~~~~~~~~v~~a~~~~~~~~~~~----~g~~~~~~~~~~~l~~~~g-~~~~~v~~~~g~t~a~~~~~~~ 85 (359)
T 1svv_A 15 PYSFVND----YSVGMHPKILDLMARDNMTQHAG----YGQDSHCAKAARLIGELLE-RPDADVHFISGGTQTNLIACSL 85 (359)
T ss_dssp CEECSCS----CSSCCCHHHHHHHHHHTTCCCCS----TTCSHHHHHHHHHHHHHHT-CTTSEEEEESCHHHHHHHHHHH
T ss_pred eEEecCC----CcCCCCHHHHHHHHHHHhhcccc----ccccHHHHHHHHHHHHHhC-CCCccEEEeCCchHHHHHHHHH
Confidence 5666543 35689999999999998752211 2356778889999999875 4567899999999999999998
Q ss_pred HHHHHhhcCCCCccEEEEEecCCccccee-eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHH
Q 010250 182 VWYYNNALGRPNKKKFIARQKSYHGSTLI-AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 260 (514)
Q Consensus 182 a~~~~~~~~~~~~~~ii~~~~~yHG~t~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 260 (514)
++ .++++|++.+++||+.... .+...|.. +..++.. .+. .++++|
T Consensus 86 ~~--------~~gd~vl~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~-~~~-------------~d~~~l 131 (359)
T 1svv_A 86 AL--------RPWEAVIATQLGHISTHETGAIEATGHK------------VVTAPCP-DGK-------------LRVADI 131 (359)
T ss_dssp HC--------CTTEEEEEETTSHHHHSSTTHHHHTTCC------------EEEECCT-TSC-------------CCHHHH
T ss_pred Hh--------CCCCEEEEcccchHHHHHHHHHhcCCCe------------eEEEeCC-CCe-------------ecHHHH
Confidence 74 2356899999999987542 11111211 1111111 111 115778
Q ss_pred HHHHHHh---CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc--ccccccceecccC--CCC
Q 010250 261 EDLILKE---GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF--GRLGTMFGCDKYS--IKP 333 (514)
Q Consensus 261 e~li~~~---~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~--gr~G~~~~~~~~g--v~p 333 (514)
++.+.+. ...++++|+++++ +++|.+.+ .+++++|+++|++||+++|+||+|.+| |+++.. ....+ ..+
T Consensus 132 ~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~--~~~~~~~~~~ 207 (359)
T 1svv_A 132 ESALHENRSEHMVIPKLVYISNT-TEVGTQYT-KQELEDISASCKEHGLYLFLDGARLASALSSPVND--LTLADIARLT 207 (359)
T ss_dssp HHHHHHSCSTTSCEEEEEEEESS-CTTSCCCC-HHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCC--CCHHHHHHHC
T ss_pred HHHHHHHHhccCCCceEEEEEcC-CCCceecC-HHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcc--hhhhhhhhcC
Confidence 8887642 1224788888887 56787665 699999999999999999999999655 554421 11111 246
Q ss_pred chhch--hhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 010250 334 DLVSF--AKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKF 411 (514)
Q Consensus 334 Div~~--sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l 411 (514)
|++++ +|. ||..++|++++++++++.+... ...++.++..++...++..+.++...-+++.++++++++++
T Consensus 208 d~~~~s~~K~--g~~~~~g~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l 280 (359)
T 1svv_A 208 DMFYIGATKA--GGMFGEALIILNDALKPNARHL-----IKQRGALMAKGWLLGIQFEVLMKDNLFFELGAHSNKMAAIL 280 (359)
T ss_dssp SEEEEECTTT--TCSSCEEEEECSGGGCTTHHHH-----HHHTTCCCTTTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHH
T ss_pred CEEEEecccC--CCCCceEEEEEcccHHHHHHHH-----HhcCCcccccchhhHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 77654 564 3335678888899887766531 00123334323222222222332111134677888899999
Q ss_pred HhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee---C-CEEEEeCCCCCCH
Q 010250 412 QDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS---G-DNIMMSPPFIMSP 486 (514)
Q Consensus 412 ~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~---g-~~iRi~p~~~~t~ 486 (514)
.+.| +..+..+... ..+.++.+.+. ..+.+.|+++ ||++... + +.|||++++.+|+
T Consensus 281 ~~~L-~~~~~~~~~~--~~~~~~~~~~~----------------~~~~~~l~~~~gi~v~~~~~~~~~~iRi~~~~~~~~ 341 (359)
T 1svv_A 281 KAGL-EACGIRLAWP--SASNQLFPILE----------------NTMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEE 341 (359)
T ss_dssp HHHH-HHTTCCBSSC--CSSSEECBEEE----------------HHHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCH
T ss_pred HHHh-ccCCeEEccC--CccceEEEEcC----------------HHHHHHHHHhcCEEEEecccCCCceEEEEccCcCCH
Confidence 9988 4433333211 12333333332 2477888888 9998542 2 4699999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 010250 487 EEVDELISKYGKALKAT 503 (514)
Q Consensus 487 e~id~~~~~l~~~l~~~ 503 (514)
+++++++++|+++++++
T Consensus 342 ~~i~~~~~~l~~~~~~~ 358 (359)
T 1svv_A 342 KECHRFVEVLKRLVAST 358 (359)
T ss_dssp HHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999887653
No 121
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.92 E-value=1.2e-23 Score=216.65 Aligned_cols=325 Identities=14% Similarity=0.148 Sum_probs=216.9
Q ss_pred CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccE
Q 010250 117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 196 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ 196 (514)
-+|+|.+|+.+++. .++.. ...+...+++++++++++....+.+++++||++|++.+++.+. .++++
T Consensus 24 ~~~~v~~a~~~~~~--~~~~~---~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~--------~~gd~ 90 (411)
T 3nnk_A 24 ADPRVLRAMSSQLI--GQYDP---AMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAI--------RPGDK 90 (411)
T ss_dssp CCHHHHHHHTSCCC--CTTCH---HHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHC--------CTTCE
T ss_pred CCHHHHHHhhcccc--ccccH---HHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhc--------CCCCE
Confidence 47888888776542 11111 1124567888999998854433348899999999999999874 34678
Q ss_pred EEEEecCCcccce-eeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEE
Q 010250 197 FIARQKSYHGSTL-IAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAF 275 (514)
Q Consensus 197 ii~~~~~yHG~t~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aav 275 (514)
|++.+++||+... ......|... ..++.+..+. .++++|++.+.+. ++++|
T Consensus 91 Vl~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~-------------~d~~~l~~~i~~~---~~~~v 142 (411)
T 3nnk_A 91 VLVPVFGRFGHLLCEIARRCRAEV------------HTIEVPWGEV-------------FTPDQVEDAVKRI---RPRLL 142 (411)
T ss_dssp EEEEECSHHHHHHHHHHHHTTCEE------------EEEECCTTCC-------------CCHHHHHHHHHHH---CCSEE
T ss_pred EEEecCCchHHHHHHHHHHcCCeE------------EEEecCCCCC-------------CCHHHHHHHHhhC---CCeEE
Confidence 9999999998421 1111122111 1111111111 0157888888642 46788
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccceeEE
Q 010250 276 IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGAIL 353 (514)
Q Consensus 276 ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig~v~ 353 (514)
+++++++.+|.+.+ +++|.++|++||+++|+||+++ +|.. .+....++ +|+++ ++|+|.|+ .++|+++
T Consensus 143 ~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~-~~~~--~~~~~~~~--~d~~~~s~~K~l~~~-~g~g~~~ 212 (411)
T 3nnk_A 143 LTVQGDTSTTMLQP----LAELGEICRRYDALFYTDATAS-LGGN--PLETDVWG--LDAVSAGMQKCLGGP-SGTSPIT 212 (411)
T ss_dssp EEESEETTTTEECC----CTTHHHHHHHHTCEEEEECTTT-BTTB--CCCTTTTT--CSEEECCSTTTTCCC-SSEEEEE
T ss_pred EEeCCCCCcceecc----HHHHHHHHHHcCCEEEEECCcc-cCCc--ccchhccC--CcEEEecCccccCCC-CceEEEE
Confidence 88999999999877 8999999999999999999987 4322 22233333 56654 56998876 5899999
Q ss_pred eCHHHHHHhhhccC----------------CCCcc------------c-ccCCCCCcHHHHHHHHHHHHHHhhc---cHH
Q 010250 354 VSPEVSEVIHSQSN----------------TLGSF------------S-HGFTYSGHPVSCAVAIEALKIYKER---NIV 401 (514)
Q Consensus 354 ~~~~i~~~l~~~~~----------------~~~~~------------~-~~~t~~~~pl~~aaa~aal~~~~~~---~~~ 401 (514)
+++++++.+..... ....+ . ....++.+..+++++.++++.+.++ ++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~ 292 (411)
T 3nnk_A 213 LSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGI 292 (411)
T ss_dssp ECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred ECHHHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHH
Confidence 99999988864310 00000 0 0112345677888888888877654 567
Q ss_pred HHHHHHHHHHHhhhhhccCCCceeE-EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee-----CC
Q 010250 402 EQVNKIAPKFQDGVKAFSDSPIIGE-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS-----GD 474 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l~~~~~~~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~-----g~ 474 (514)
++++++++++.+.|+++ ....... ....+.++.+.+.+.. ....+.+.|+++ ||.++++ ++
T Consensus 293 ~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~l~~~~gi~v~~g~~~~~~~ 360 (411)
T 3nnk_A 293 ARHKLHGDALVKGIQAM-GLETFGDLKHKMNNVLGVVIPQGI-----------NGDQARKLMLEDFGIEIGTSFGPLHGK 360 (411)
T ss_dssp HHHHHHHHHHHHHHHHT-TCCBCSCGGGBCSSEEEEECCTTC-----------CHHHHHHHHHHHHSEEEEECCGGGTTT
T ss_pred HHHHHHHHHHHHHHHHc-CCEeCCCcccccccEEEEECCCCC-----------CHHHHHHHHHHhcCeEEeCccCCCCCC
Confidence 88899999999999876 3222211 1123556677664321 145677888876 9999863 35
Q ss_pred EEEEeC-CCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 475 NIMMSP-PFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 475 ~iRi~p-~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
.|||++ +...|++||++++++|+++++++.
T Consensus 361 ~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 391 (411)
T 3nnk_A 361 VWRIGTMGYNARKDCVMTTLSALEAVLNYLK 391 (411)
T ss_dssp EEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEeCccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 799998 778899999999999999987653
No 122
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.92 E-value=1.7e-23 Score=213.31 Aligned_cols=337 Identities=19% Similarity=0.177 Sum_probs=221.0
Q ss_pred EEEEccCCcccccCCCCCHHHHHHHHHHHhcCC-ccc---cccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250 101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYH---SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 176 (514)
Q Consensus 101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~---~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~ 176 (514)
.|||+.++ |+.+|+|++|+.+++++.. ..+ ...........++.+.++++++ .+.+++++++||++|++
T Consensus 3 ~yld~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g-~~~~~v~~~~g~t~a~~ 75 (384)
T 1eg5_A 3 VYFDNNAT------TRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLG-VSPSEIFFTSCATESIN 75 (384)
T ss_dssp EECBTTTC------CCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHT-SCGGGEEEESCHHHHHH
T ss_pred EEEecCcc------CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcC-CCCCeEEEECCHHHHHH
Confidence 58887554 4789999999999987521 110 0001123455789999999884 34568999999999999
Q ss_pred HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee--ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250 177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA--SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254 (514)
Q Consensus 177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~--~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
.+++.+..+. . .++++|++.+++||+...... ...|.... .++....+.
T Consensus 76 ~~~~~~~~~~---~-~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~------------~v~~~~~~~------------- 126 (384)
T 1eg5_A 76 WILKTVAETF---E-KRKRTIITTPIEHKAVLETMKYLSMKGFKVK------------YVPVDSRGV------------- 126 (384)
T ss_dssp HHHHHHHHHT---T-TTCCEEEECTTSCHHHHHHHHHHHHTTCEEE------------ECCBCTTSC-------------
T ss_pred HHHHhhhhhc---c-CCCCEEEECCCCchHHHHHHHHHHhcCCEEE------------EEccCCCCc-------------
Confidence 9999885321 0 234689999999988643221 12222111 111111110
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC--CEEEEechhcCcccccccceecccCCC
Q 010250 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD--ILFIADEVICAFGRLGTMFGCDKYSIK 332 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~g--illI~DEv~tG~gr~G~~~~~~~~gv~ 332 (514)
.++++|++.+. +++++|+++++++++|.+.+ +++|.++|++|| +++|+||+|+ ||... .... ...
T Consensus 127 ~d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~~~li~Dea~~-~~~~~--~~~~--~~~ 193 (384)
T 1eg5_A 127 VKLEELEKLVD----EDTFLVSIMAANNEVGTIQP----VEDVTRIVKKKNKETLVHVDAVQT-IGKIP--FSLE--KLE 193 (384)
T ss_dssp BCHHHHHHHCC----TTEEEEEEESBCTTTCBBCC----HHHHHHHHHHHCTTCEEEEECTTT-TTTSC--CCCT--TTC
T ss_pred cCHHHHHHHhC----CCCeEEEEECCCCCcccccC----HHHHHHHHHhcCCceEEEEEhhhh-cCCcc--cCch--hcC
Confidence 11466776664 36788888999999998887 899999999999 9999999997 65432 2222 234
Q ss_pred Cchhchh--hhhcCCcccceeEEeCHHH--HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHH
Q 010250 333 PDLVSFA--KALSSAYMPIGAILVSPEV--SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNK 406 (514)
Q Consensus 333 pDiv~~s--K~l~gG~~pig~v~~~~~i--~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~ 406 (514)
+|++++| |.++. ..+|++++++++ ...+.. .+......+++.++++++++.++|+.+.+ +++.+++++
T Consensus 194 ~di~~~s~sK~~g~--~G~G~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~ 267 (384)
T 1eg5_A 194 VDYASFSAHKFHGP--KGVGITYIRKGVPIRPLIHG----GGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEK 267 (384)
T ss_dssp CSEEEEEGGGGTSC--TTCEEEEECTTSCCCCSBCS----SCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CCEEEecHHHhcCC--CceEEEEEcCCCcccccccc----CcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 7888655 97543 227999999875 211110 00001123567788889888899987543 456788888
Q ss_pred HHHHHHhhhhhccCCCceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------------
Q 010250 407 IAPKFQDGVKAFSDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS------------- 472 (514)
Q Consensus 407 ~~~~l~~~L~~l~~~~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~------------- 472 (514)
+.+++.+.|++. ...+..... +.+.+..+.+.+. ....+.+.|.++||.+.++
T Consensus 268 ~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~ 334 (384)
T 1eg5_A 268 LRSKLVSGLMNL-GAHIITPLEISLPNTLSVSFPNI------------RGSTLQNLLSGYGIYVSTSSACTSKDERLRHV 334 (384)
T ss_dssp HHHHHHHHHHTT-TCEECSCTTSBCTTEEEEECTTC------------CHHHHHHHHHHTTEECBC------------CH
T ss_pred HHHHHHHHhCCC-CeEEeCCcccCCCCEEEEEeCCC------------CHHHHHHHHhhCCeEEeccccccCCCCcchHH
Confidence 899999888763 221111101 1234556655421 1456778899999998863
Q ss_pred -----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 473 -----------GDNIMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 473 -----------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
.+.|||++...+|++|+++++++|+++++++.+
T Consensus 335 ~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 378 (384)
T 1eg5_A 335 LDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFLDL 378 (384)
T ss_dssp HHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC--
T ss_pred HHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 146999988889999999999999999887643
No 123
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.92 E-value=8.8e-24 Score=213.89 Aligned_cols=336 Identities=14% Similarity=0.178 Sum_probs=221.4
Q ss_pred EEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC-CCCeEEEeCChhHHHHHHHH
Q 010250 102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS-KMAKVFFTNSGSEANDTQVK 180 (514)
Q Consensus 102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~-~~~~v~~~~sGseA~~~Alk 180 (514)
++||..| +++ .+|+|++|+.+++. +... ....+...++.++++++++.. ..+++++++||++|++.+++
T Consensus 5 ~~~~~~g----p~~-~~~~v~~a~~~~~~---~~~~--~~~~~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~ 74 (366)
T 1m32_A 5 YLLLTPG----PLT-TSRTVKEAMLFDSC---TWDD--DYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLG 74 (366)
T ss_dssp CEECSSS----SCC-CCHHHHHTTCCCCC---TTSH--HHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHH
T ss_pred cccccCC----CcC-CCHHHHHHHhhhhc---CCCH--HHHHHHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHH
Confidence 5787766 333 78999999877532 1111 001256678999999998521 23579999999999999998
Q ss_pred HHHHHHhhcCCCCccEEEEEecCCccccee-eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250 181 LVWYYNNALGRPNKKKFIARQKSYHGSTLI-AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259 (514)
Q Consensus 181 ~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (514)
.++ ..+++||++++.||+.... .....|... ..++.+..+ ..++++
T Consensus 75 ~~~--------~~gd~vi~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~-------------~~d~~~ 121 (366)
T 1m32_A 75 SAL--------GPQDKVLIVSNGAYGARMVEMAGLMGIAH------------HAYDCGEVA-------------RPDVQA 121 (366)
T ss_dssp HSC--------CTTCCEEEEESSHHHHHHHHHHHHHTCCE------------EEEECCTTS-------------CCCHHH
T ss_pred Hhc--------CCCCeEEEEeCCCccHHHHHHHHHhCCce------------EEEeCCCCC-------------CCCHHH
Confidence 773 2345788888888875321 111112111 111111110 012578
Q ss_pred HHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc--
Q 010250 260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS-- 337 (514)
Q Consensus 260 le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~-- 337 (514)
|++.+.+. .++.+|++...++.+|.+.+ +++|.++|++||+++|+||+|+ +|..+ +... ...+|+++
T Consensus 122 l~~~l~~~--~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~-~~~~~--~~~~--~~~~di~~~s 190 (366)
T 1m32_A 122 IDAILNAD--PTISHIAMVHSETTTGMLNP----IDEVGALAHRYGKTYIVDAMSS-FGGIP--MDIA--ALHIDYLISS 190 (366)
T ss_dssp HHHHHHHC--TTCCEEEEESEETTTTEECC----HHHHHHHHHHHTCEEEEECTTT-TTTSC--CCTT--TTTCSEEEEE
T ss_pred HHHHHhcC--CCeEEEEEecccCCcceecC----HHHHHHHHHHcCCEEEEECCcc-ccCcC--cccc--ccCccEEEec
Confidence 88888652 13455655566667788877 9999999999999999999997 54442 1122 23478774
Q ss_pred hhhhhcCCcccceeEEeCHHHHHHhhhccCCCCc----cc-------ccCCCCCcHHHHHHHHHHHHHHhhc----cHHH
Q 010250 338 FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS----FS-------HGFTYSGHPVSCAVAIEALKIYKER----NIVE 402 (514)
Q Consensus 338 ~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~----~~-------~~~t~~~~pl~~aaa~aal~~~~~~----~~~~ 402 (514)
++|+++|+ .++|++++++++++.+......... .. ....++.++.+++++.++++.+.+. ++.+
T Consensus 191 ~~K~~~~~-~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~ 269 (366)
T 1m32_A 191 ANKCIQGV-PGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQ 269 (366)
T ss_dssp SSSTTCCC-SSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred CcccccCC-CceEEEEECHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHH
Confidence 67999776 5789999999988777532100000 00 0113577888898899999877543 4678
Q ss_pred HHHHHHHHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----CCEEE
Q 010250 403 QVNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----GDNIM 477 (514)
Q Consensus 403 ~~~~~~~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----g~~iR 477 (514)
+++++++++.+.|+++ ...+.... ...|.++.+.+.+... . ....+.+.|.++||.+.++ .+.+|
T Consensus 270 ~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~l~~~gi~v~~~~~~~~~~iR 339 (366)
T 1m32_A 270 RYQQNQRSLVAGMRAL-GFNTLLDDELHSPIITAFYSPEDPQ-Y--------RFSEFYRRLKEQGFVIYPGKVSQSDCFR 339 (366)
T ss_dssp HHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCCCTT-C--------CHHHHHHHHHHTTEECEECCCSSSCEEE
T ss_pred HHHHHHHHHHHHHHHC-CCeeccCchhcCceEEEEEcCccCC-C--------CHHHHHHHHHHCCEEEECCcCCCCCEEE
Confidence 8899999999999876 33322211 1235577887753100 0 1456888999999999874 35799
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 478 MSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 478 i~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
++++..+|++++++++++|++++++
T Consensus 340 i~~~~~~~~~~i~~~~~~l~~~~~~ 364 (366)
T 1m32_A 340 IGNIGEVYAADITALLTAIRTAMYW 364 (366)
T ss_dssp EECCSSCCHHHHHHHHHHHHHHCTT
T ss_pred EecCCCCCHHHHHHHHHHHHHHHHh
Confidence 9999889999999999999987653
No 124
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.91 E-value=2.2e-23 Score=212.35 Aligned_cols=319 Identities=14% Similarity=0.158 Sum_probs=204.6
Q ss_pred CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC-CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCcc
Q 010250 117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK-MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 195 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~-~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~ 195 (514)
-+|+|++|+.+++.. +.+. ...+...+++++++++++... .+.+++++||++|++.+++.+. .+++
T Consensus 30 ~~~~v~~a~~~~~~~--~~~~---~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~--------~~gd 96 (376)
T 3f0h_A 30 SSEEVRAIGAEQVPY--FRTT---EFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCF--------TKKD 96 (376)
T ss_dssp CCHHHHHHHTSCCCC--CSSH---HHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHC--------CTTC
T ss_pred CcHHHHHHhcCCCCC--CCCH---HHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhcc--------CCCC
Confidence 478888888766532 1111 122456778888888875322 2345558999999999998774 3456
Q ss_pred EEEEEecCCcccceee-eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEE
Q 010250 196 KFIARQKSYHGSTLIA-ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAA 274 (514)
Q Consensus 196 ~ii~~~~~yHG~t~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aa 274 (514)
+||+.+++||+..... ....+... ..++.+..+.. ++++|++.+. +++++
T Consensus 97 ~vi~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~~-------------d~~~l~~~~~----~~~~~ 147 (376)
T 3f0h_A 97 KVLVIDGGSFGHRFVQLCEIHEIPY------------VALKLEHGKKL-------------TKEKLYEYDN----QNFTG 147 (376)
T ss_dssp CEEEEESSHHHHHHHHHHHHTTCCE------------EEEECCTTCCC-------------CHHHHHTTTT----SCCCE
T ss_pred eEEEEeCChhhHHHHHHHHHcCCce------------EEEeCCCCCCC-------------CHHHHHHhhc----cCceE
Confidence 8999998888854221 11112111 11111111110 1456665432 46778
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEe
Q 010250 275 FIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILV 354 (514)
Q Consensus 275 vivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~ 354 (514)
|+++++++.+|.+.| +++|+++|++||+++|+||+|+++++. +..+.+++...+.+++|+++++ .++|++++
T Consensus 148 v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~~~~~~~~~---~~~~~~~~d~~~~s~~K~l~~~-~G~g~~~~ 219 (376)
T 3f0h_A 148 LLVNVDETSTAVLYD----TMMIGEFCKKNNMFFVCDCVSAFLADP---FNMNECGADVMITGSQKVLACP-PGISVIVL 219 (376)
T ss_dssp EEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTTTTTSC---CCHHHHTCSEEEEETTTTTCCC-SSCEEEEE
T ss_pred EEEecccCCcceecC----HHHHHHHHHHcCCEEEEEcCccccCcc---ccccccCccEEEecCcccccCC-CceEEEEE
Confidence 889988999999887 999999999999999999999855432 3344455533444677999865 67899999
Q ss_pred CHHHHHHhhhccCCCCcc-----------c-ccCCCCCcHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHhhhhhc
Q 010250 355 SPEVSEVIHSQSNTLGSF-----------S-HGFTYSGHPVSCAVAIEALKIYKER----NIVEQVNKIAPKFQDGVKAF 418 (514)
Q Consensus 355 ~~~i~~~l~~~~~~~~~~-----------~-~~~t~~~~pl~~aaa~aal~~~~~~----~~~~~~~~~~~~l~~~L~~l 418 (514)
++++++.+..... ..+ . .+..+..+..+++++.++++.+.++ ++.++.+++.+++.+.|+++
T Consensus 220 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 297 (376)
T 3f0h_A 220 APRGVERVEKSKV--RTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDL 297 (376)
T ss_dssp CHHHHHHHHTCCC--CCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred CHHHHHHhhcCCC--CceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999988864211 000 0 1123444555567777888877654 35666777777777777764
Q ss_pred cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee-----CCEEEEeCCCCCCHHHHHHH
Q 010250 419 SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS-----GDNIMMSPPFIMSPEEVDEL 492 (514)
Q Consensus 419 ~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~-----g~~iRi~p~~~~t~e~id~~ 492 (514)
....... ...+.++.+.... . ....+.+.|.++ ||.++++ ++.||++++..+|++|++++
T Consensus 298 -~~~~~~~-~~~~~~~~~~~~~-~-----------~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~ 363 (376)
T 3f0h_A 298 -PFELVSE-SPANGVTSVHPTT-A-----------NAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTL 363 (376)
T ss_dssp -SEEECCS-SBBTTEEEEEESS-S-----------CHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHH
T ss_pred -CCccCcc-ccCceEEEEeCCC-C-----------CHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHH
Confidence 1111111 1122233332211 1 145688889988 9999864 25799999999999999999
Q ss_pred HHHHHHHHH
Q 010250 493 ISKYGKALK 501 (514)
Q Consensus 493 ~~~l~~~l~ 501 (514)
+++|+++++
T Consensus 364 ~~~l~~~l~ 372 (376)
T 3f0h_A 364 VNAFKDLQK 372 (376)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998875
No 125
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.91 E-value=3.9e-23 Score=212.83 Aligned_cols=336 Identities=11% Similarity=0.043 Sum_probs=216.9
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-ccccc---cCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFWN---RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE 173 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~~~~~---~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse 173 (514)
++..|||+.++. +.+|+|++|+.++++..... +..+. ...+...++.+.++++++. +.++++|++||++
T Consensus 25 ~~~~~ld~~~~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~-~~~~v~~~~g~t~ 97 (406)
T 3cai_A 25 DGWVHFDAPAGM------LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNA-DPGGVVLGADRAV 97 (406)
T ss_dssp SSCEECBGGGCC------CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTC-CGGGEEEESCHHH
T ss_pred CCeEEEeCCCcC------CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCC-CCCeEEEeCChHH
Confidence 357899986552 57999999999998763211 11110 1234567889999998843 4568999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeec---CCCccccCCCCCCCCcccccCCC-CcccCCCCCCCh
Q 010250 174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL---SGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETE 249 (514)
Q Consensus 174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 249 (514)
+++.+++..... . .++++||+.+++|++.......+ .|... ..++.. ..+.
T Consensus 98 al~~~~~~l~~~----~-~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v------------~~v~~~~~~~~-------- 152 (406)
T 3cai_A 98 LLSLLAEASSSR----A-GLGYEVIVSRLDDEANIAPWLRAAHRYGAKV------------KWAEVDIETGE-------- 152 (406)
T ss_dssp HHHHHHHHTGGG----G-BTTCEEEEETTSCGGGTHHHHHHHHHHBCEE------------EEECCCTTTCC--------
T ss_pred HHHHHHHHHhhc----c-CCCCEEEEcCCccHHHHHHHHHHHHhcCCeE------------EEEecCcccCC--------
Confidence 999998754100 0 23468999998888753222111 11111 111111 0000
Q ss_pred hHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceeccc
Q 010250 250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKY 329 (514)
Q Consensus 250 ~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~ 329 (514)
.++++|++.+. +++++|+++++++++|.+.+ +++|.++|++||+++|+||+|+ +|... +....+
T Consensus 153 -----~d~~~l~~~l~----~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~g~~~--~~~~~~ 216 (406)
T 3cai_A 153 -----LPTWQWESLIS----KSTRLVAVNSASGTLGGVTD----LRAMTKLVHDVGALVVVDHSAA-APYRL--LDIRET 216 (406)
T ss_dssp -----CCGGGHHHHCC----TTEEEEEEESBCTTTCBBCC----CHHHHHHHHHTTCEEEEECTTT-TTTCC--CCHHHH
T ss_pred -----cCHHHHHHHhC----CCceEEEEeCCcCCccccCC----HHHHHHHHHHcCCEEEEEcccc-cCCCC--CCchhc
Confidence 01356666663 46889999999999998887 8999999999999999999997 43321 222333
Q ss_pred CCCCchhc--hhhhhcCCcccce-eEEeCHHHHHHhhhccCCCCc-cccc-CCCCCcHHHHHHHHHHHHHHhh-------
Q 010250 330 SIKPDLVS--FAKALSSAYMPIG-AILVSPEVSEVIHSQSNTLGS-FSHG-FTYSGHPVSCAVAIEALKIYKE------- 397 (514)
Q Consensus 330 gv~pDiv~--~sK~l~gG~~pig-~v~~~~~i~~~l~~~~~~~~~-~~~~-~t~~~~pl~~aaa~aal~~~~~------- 397 (514)
+ +|+++ ++|.++ + ++| ++++++++++.+.+.....+. .... .....++.+++++.++++.+.+
T Consensus 217 ~--~d~~~~s~~K~~g-~--~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~ 291 (406)
T 3cai_A 217 D--ADVVTVNAHAWGG-P--PIGAMVFRDPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARG 291 (406)
T ss_dssp C--CSEEEEEGGGGTS-C--SCEEEEESCHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCS
T ss_pred C--CCEEEeehhhhcC-C--CcCeEEEEehHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhcccccc
Confidence 3 67764 679764 3 388 899999988777532100000 0000 1234577777777788887754
Q ss_pred ----------ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCc
Q 010250 398 ----------RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM 467 (514)
Q Consensus 398 ----------~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 467 (514)
+++.++++++++++.+.|+++....+.......+.++.+.+... ....+.+.|.++||
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~L~~~gi 359 (406)
T 3cai_A 292 SRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAVHKV------------PADRVVQRLADNGI 359 (406)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCSEEEEEETTB------------CHHHHHHHHHHTTE
T ss_pred chhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCCEEEEEECCc------------CHHHHHHHHHHCCc
Confidence 34567777888888888876522111111111344667766421 14567888899999
Q ss_pred EEEeeC--------------CEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250 468 LVRVSG--------------DNIMMSPPFIMSPEEVDELISKYGK 498 (514)
Q Consensus 468 ~~~~~g--------------~~iRi~p~~~~t~e~id~~~~~l~~ 498 (514)
.+.++. +.||++++..+|++|+++++++|++
T Consensus 360 ~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 360 LAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp ECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHT
T ss_pred EEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHH
Confidence 998643 5699999988999999999999875
No 126
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.91 E-value=8.3e-23 Score=209.25 Aligned_cols=339 Identities=14% Similarity=0.107 Sum_probs=212.5
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEAND 176 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~ 176 (514)
+|+.++||.+|.. .++ .+|.+.+++.+.++.....+....+..+....+++.+...++ ....+++++++||++|++
T Consensus 29 ~~~~~i~l~~~~~--~~~-~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~ 105 (385)
T 1b5p_A 29 QGVDLVALTAGEP--DFD-TPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALF 105 (385)
T ss_dssp TTCCCEECCCSSC--SSC-CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHH
T ss_pred cCCCEEEecCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHH
Confidence 3566789877742 344 478999999998865321111111223334444444444332 124578999999999999
Q ss_pred HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC--cccCCCCCCChhHHHH
Q 010250 177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH--YWRYAHPGETEEEYST 254 (514)
Q Consensus 177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 254 (514)
.+++... .++++|++.+++|++....... .|... ..++... .|.
T Consensus 106 ~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~-~g~~~------------~~v~~~~~~~~~------------- 151 (385)
T 1b5p_A 106 NLFQAIL--------DPGDEVIVLSPYWVSYPEMVRF-AGGVV------------VEVETLPEEGFV------------- 151 (385)
T ss_dssp HHHHHHC--------CTTCEEEEEESCCTHHHHHHHH-TTCEE------------EEEECCGGGTTC-------------
T ss_pred HHHHHhc--------CCCCEEEEcCCCchhHHHHHHH-cCCEE------------EEeecCcccCCC-------------
Confidence 9998763 3356899999999876433222 12111 1111110 010
Q ss_pred HHHHHHHHHHHHhCCCcEEEEE-EccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCC
Q 010250 255 RLANNLEDLILKEGPETIAAFI-AEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKP 333 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aavi-vEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~p 333 (514)
.+.++|++.+. +++.+|+ +.| ++++|.+. +++.+++|.++|++||+++|+||+|+.+...|.......+.-..
T Consensus 152 ~d~~~l~~~l~----~~~~~v~~~~p-~NPtG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 225 (385)
T 1b5p_A 152 PDPERVRRAIT----PRTKALVVNSP-NNPTGAVY-PKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEH 225 (385)
T ss_dssp CCHHHHHTTCC----TTEEEEEEESS-CTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTT
T ss_pred CCHHHHHHhcC----CCCEEEEEeCC-CCCCCCCc-CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCCC
Confidence 01456666553 2344444 455 45556544 66889999999999999999999999775444221222221112
Q ss_pred chh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH---Hhh--ccHHHHHHH
Q 010250 334 DLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI---YKE--RNIVEQVNK 406 (514)
Q Consensus 334 Div--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~---~~~--~~~~~~~~~ 406 (514)
+++ +|||.++..++++|++++++++++.+... ....+++.+++++.++.++|+. ..+ ++..+++++
T Consensus 226 ~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 298 (385)
T 1b5p_A 226 TLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASV-------SRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRR 298 (385)
T ss_dssp EEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHH-------HHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEechhhcCCcccceEEEEeCHHHHHHHHHH-------HhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHH
Confidence 232 68998874338999999999998887641 2234667788888888888863 222 345677888
Q ss_pred HHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCC
Q 010250 407 IAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPP 481 (514)
Q Consensus 407 ~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~ 481 (514)
+.+++.+.|+++ ...+.. ...|.++.+.+.... . ....+.+.|.++||.+.++ .+.+||+
T Consensus 299 ~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~~~~--~--------~~~~l~~~l~~~gv~v~~g~~f~~~~~iRis-- 363 (385)
T 1b5p_A 299 RRDLLLEGLTAL-GLKAVR--PSGAFYVLMDTSPIA--P--------DEVRAAERLLEAGVAVVPGTDFAAFGHVRLS-- 363 (385)
T ss_dssp HHHHHHHHHHHH-TCCBCC--CSBTTEEEEECTTTC--S--------SHHHHHHHHHHTTEECEESGGGTCTTEEEEE--
T ss_pred HHHHHHHHHHHC-CCeecC--CCeeEEEEEecCCCC--C--------CHHHHHHHHHHCCeEEecccccCCCCeEEEE--
Confidence 888888888876 322221 112334555553211 0 1456778888999999875 2579999
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q 010250 482 FIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 482 ~~~t~e~id~~~~~l~~~l~ 501 (514)
+..++++|++++++|.++++
T Consensus 364 ~~~~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 364 YATSEENLRKALERFARVLG 383 (385)
T ss_dssp CCSCHHHHHHHHHHGGGGC-
T ss_pred ecCCHHHHHHHHHHHHHHHh
Confidence 45899999999999987764
No 127
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.91 E-value=3.2e-23 Score=212.43 Aligned_cols=339 Identities=14% Similarity=0.107 Sum_probs=220.9
Q ss_pred CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCC-eEEEeCChhHHH
Q 010250 97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMA-KVFFTNSGSEAN 175 (514)
Q Consensus 97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~-~v~~~~sGseA~ 175 (514)
.+|+.|+|..+. ++ .+|++++|+.+++... +. ....+...++.+.++++++. +.+ ++++++||++|+
T Consensus 16 ~~~~~~~~~~g~-----~~-~~~~v~~a~~~~~~~~--~~---~~~~~~~~~l~~~la~~~g~-~~~~~i~~~~g~t~a~ 83 (393)
T 2huf_A 16 VTPNKLLMGPGP-----SN-APQRVLDAMSRPILGH--LH---PETLKIMDDIKEGVRYLFQT-NNIATFCLSASGHGGM 83 (393)
T ss_dssp CCCCCEECSSSC-----CC-CCHHHHHHTTSCCCCT--TS---HHHHHHHHHHHHHHHHHHTC-CCSEEEEESSCHHHHH
T ss_pred CCCCeEEecCCC-----CC-CCHHHHHHHHhhhccC--CC---HHHHHHHHHHHHHHHHHhCC-CCCcEEEEcCcHHHHH
Confidence 356777775443 22 6899999988766431 11 11234567889999998853 333 799999999999
Q ss_pred HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee-ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250 176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA-SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254 (514)
Q Consensus 176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
+.+++.++ .++++|++.+++||+...... ...|.. +..++.+..+ .
T Consensus 84 ~~~~~~~~--------~~gd~vl~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~-------------~ 130 (393)
T 2huf_A 84 EATLCNLL--------EDGDVILIGHTGHWGDRSADMATRYGAD------------VRVVKSKVGQ-------------S 130 (393)
T ss_dssp HHHHHHHC--------CTTCEEEEEESSHHHHHHHHHHHHTTCE------------EEEEECCTTC-------------C
T ss_pred HHHHHHHh--------CCCCEEEEECCCcchHHHHHHHHHcCCe------------eEEEeCCCCC-------------C
Confidence 99998873 335689999999998421111 111211 1111111110 0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCc
Q 010250 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPD 334 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pD 334 (514)
.++++|++.+.+. ++++|+++++++++|.+.+ +++|.++|++||+++|+||+|+ +|.. ..... ...+|
T Consensus 131 ~d~~~l~~~i~~~---~~~~v~~~~~~nptG~~~~----l~~i~~~~~~~~~~li~D~a~~-~~~~--~~~~~--~~~~d 198 (393)
T 2huf_A 131 LSLDEIRDALLIH---KPSVLFLTQGDSSTGVLQG----LEGVGALCHQHNCLLIVDTVAS-LGGA--PMFMD--RWEID 198 (393)
T ss_dssp CCHHHHHHHHHHH---CCSEEEEESEETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-BTTB--CCCTT--TTTCS
T ss_pred CCHHHHHHHHhcc---CCcEEEEEccCCCccccCC----HHHHHHHHHHcCCEEEEEcccc-cCCC--Ccchh--hcCcc
Confidence 1157788877632 3567788888888998877 8999999999999999999986 5543 12222 22468
Q ss_pred hhch--hhhhcCCcccceeEEeCHHHHHHhhhccCCCCccc---------------ccCCC-CCcHHHHHHHHHHHHHHh
Q 010250 335 LVSF--AKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS---------------HGFTY-SGHPVSCAVAIEALKIYK 396 (514)
Q Consensus 335 iv~~--sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~---------------~~~t~-~~~pl~~aaa~aal~~~~ 396 (514)
++++ +|+++|+ .++|++++++++++.+........++. ...++ ..+..+++++.++++.+.
T Consensus 199 ~~~~s~sK~l~g~-~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~ 277 (393)
T 2huf_A 199 AMYTGSQKVLGAP-PGITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMAC 277 (393)
T ss_dssp EEECCSSSTTCCC-SSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHH
T ss_pred EEEECCCcccccC-CCeEEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHH
Confidence 7754 5998864 466999999999988864310001111 12232 345566666677888765
Q ss_pred h---ccHHHHHHHHHHHHHhhhhhccCCCceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEe
Q 010250 397 E---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRV 471 (514)
Q Consensus 397 ~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~ 471 (514)
+ +++.++++++++++.+.|+++ ...+..... ..+.++.+.+.... ....+.+.|.++ ||.+.+
T Consensus 278 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~L~~~~gi~v~~ 345 (393)
T 2huf_A 278 EEGLPALIARHEDCAKRLYRGLQDA-GFELYADPKDRLSTVTTIKVPQGV-----------DWLKAAQYAMKTYLVEISG 345 (393)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCTTEEEEECCTTC-----------CHHHHHHHHHHHHCEECBC
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCccccCCcEEEEEcCCCC-----------CHHHHHHHHHHhCCEEEec
Confidence 4 346788889999999999876 333322110 12346666664211 145677888765 999986
Q ss_pred e-----CCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 472 S-----GDNIMMSP-PFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 472 ~-----g~~iRi~p-~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
+ .+.+|+++ ++..+++++++++++|+++++++..
T Consensus 346 g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~~ 385 (393)
T 2huf_A 346 GLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVKP 385 (393)
T ss_dssp CCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCC
T ss_pred CcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcCC
Confidence 4 35799998 5567899999999999999877654
No 128
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.91 E-value=1.4e-23 Score=220.66 Aligned_cols=351 Identities=13% Similarity=0.112 Sum_probs=229.1
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc----cccc-cccCCchHHHHHHHHHHhcCcCCCCeEEEeCChh
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF----YHSF-WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGS 172 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~----~~~~-~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGs 172 (514)
++..|||. +++|+.++.+.+++.++++.... .+.. .....+...++.++++++++. +.++|+|++|++
T Consensus 66 ~~~iyld~------~~~g~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~-~~~~v~~t~g~t 138 (465)
T 3e9k_A 66 ENAIYFLG------NSLGLQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGA-NEKEIALMNALT 138 (465)
T ss_dssp CBCEECBT------TTSCCEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTC-CGGGEEECSCHH
T ss_pred CCeEEecC------CccCCChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCC-CcCCEEEECCHH
Confidence 45678874 45788888898888887754221 1110 011224456788888888753 457999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee---ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCCh
Q 010250 173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA---SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETE 249 (514)
Q Consensus 173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~---~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (514)
+++..+++.+.. .+ ..+++||+.+++||+...... ...|..... ..+...+.+..+.
T Consensus 139 ~al~~~~~~~~~----~~-~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~-------~~v~~~~~~~~~~-------- 198 (465)
T 3e9k_A 139 VNLHLLMLSFFK----PT-PKRYKILLEAKAFPSDHYAIESQLQLHGLNIEE-------SMRMIKPREGEET-------- 198 (465)
T ss_dssp HHHHHHHHHHCC----CC-SSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHH-------HEEEECCCTTCSS--------
T ss_pred HHHHHHHHHhcc----cc-CCCCEEEEcCCcCCchHHHHHHHHHHcCCccee-------eeEEEecCCCCCc--------
Confidence 999999987631 11 235679999999998543211 111211000 0000011111111
Q ss_pred hHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceeccc
Q 010250 250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKY 329 (514)
Q Consensus 250 ~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~ 329 (514)
.+.+++++++.+.. +++++|+++.+++.+|.+.+ +++|.++|++||+++|+|++|+ +|.. ......+
T Consensus 199 -----~d~~~l~~~i~~~~-~~~~lv~~~~~~n~tG~~~~----l~~i~~la~~~g~~vi~D~a~~-~g~~--~~~~~~~ 265 (465)
T 3e9k_A 199 -----LRIEDILEVIEKEG-DSIAVILFSGVHFYTGQHFN----IPAITKAGQAKGCYVGFDLAHA-VGNV--ELYLHDW 265 (465)
T ss_dssp -----CCHHHHHHHHHHHG-GGEEEEEEESBCTTTCBBCC----HHHHHHHHHHTTCEEEEECTTT-TTTS--CCCHHHH
T ss_pred -----cCHHHHHHHHHhcC-CCeEEEEEeCcccCcceeec----HHHHHHHHHHcCCEEEEEhhhh-cCCc--CCchhhc
Confidence 11578888886542 37899999999999999987 8999999999999999999997 4332 1222223
Q ss_pred CCCCchhc--hhhhhcCCcccceeEEeCHHHHHHhhhccCCC--C----ccc--ccCC----------CCCcHHHHHHHH
Q 010250 330 SIKPDLVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNTL--G----SFS--HGFT----------YSGHPVSCAVAI 389 (514)
Q Consensus 330 gv~pDiv~--~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~--~----~~~--~~~t----------~~~~pl~~aaa~ 389 (514)
..|+++ ++|.+.+|..++|++++++++.+.+.+....+ + .+. ..++ .+.+++++++..
T Consensus 266 --~~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~ 343 (465)
T 3e9k_A 266 --GVDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLH 343 (465)
T ss_dssp --TCCEEEECSSSTTCCCTTCCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHH
T ss_pred --CCCEEEECcccccccCCCceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHH
Confidence 357664 56999654357899999998876654311000 0 000 0011 145678888888
Q ss_pred HHHHHHhh---ccHHHHHHHHHHHHHhhhhhc----------cCCCcee--EEEeeeeeEEEEEccCCCCCCCCCCccch
Q 010250 390 EALKIYKE---RNIVEQVNKIAPKFQDGVKAF----------SDSPIIG--EIRGTGLILGTEFADNKSPNEPFPPEWGI 454 (514)
Q Consensus 390 aal~~~~~---~~~~~~~~~~~~~l~~~L~~l----------~~~~~~~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~ 454 (514)
++++.+.+ +++.++..++.+++.+.|+++ ....++. +....|.++.+.+... .
T Consensus 344 aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~~--~---------- 411 (465)
T 3e9k_A 344 ASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSVP--N---------- 411 (465)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECCT--T----------
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecCC--H----------
Confidence 88988765 457888899999999999874 1111111 1123477888877521 1
Q ss_pred HHHHHHHHHHCCcEEEeeC-CEEEEeC-CCCCCHHHHHHHHHHHHHHHHHH
Q 010250 455 GAYFGAQCEKHGMLVRVSG-DNIMMSP-PFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 455 ~~~~~~~l~~~Gv~~~~~g-~~iRi~p-~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
..+.+.|.++||++...+ +.|||+| |+.+|++||++++++|++++++.
T Consensus 412 -~~l~~~L~~~Gi~v~~~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~ 461 (465)
T 3e9k_A 412 -KDVFQELEKRGVVCDKRNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSA 461 (465)
T ss_dssp -CCHHHHHHTTTEECEEETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC-
T ss_pred -HHHHHHHHHCCEEEecCCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhc
Confidence 126788999999988664 7899999 89999999999999999988653
No 129
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.91 E-value=6.1e-23 Score=212.13 Aligned_cols=308 Identities=13% Similarity=0.056 Sum_probs=192.2
Q ss_pred HHHHHHHHHHhc----C-cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCC-CCccEEEEE-ecCCcccceeeeecCCCc
Q 010250 146 SLDLAKELLEMF----T-ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGR-PNKKKFIAR-QKSYHGSTLIAASLSGLP 218 (514)
Q Consensus 146 ~~ela~~L~~~~----~-~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~-~~~~~ii~~-~~~yHG~t~~~~~~s~~~ 218 (514)
..++.+.+++++ + ..+.++|++++||++|++.+++.+.. .+. .++.+||+. +++||+............
T Consensus 77 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~----~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~ 152 (417)
T 3g7q_A 77 KTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAG----RRADGSTKKVLFPLAPEYIGYADSGLEDDLFV 152 (417)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSB----C----CCBEEEESSCCCHHHHHC-----CCEE
T ss_pred cHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcC----CCccCCcceEEEeCCCccccchhhccchhhhc
Confidence 456666666664 1 23568999999999999999998731 111 112378886 999999865432211100
Q ss_pred cccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHH
Q 010250 219 ALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKV 297 (514)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l 297 (514)
... +.+..++.. ..|.. ++++|+ + . +++++|+++..++++|.+. +.+.+++|
T Consensus 153 ----~~~---~~~~~~~~~~~~~~~-------------d~~~l~--~---~-~~~~~v~~~~p~NptG~~~-~~~~~~~l 205 (417)
T 3g7q_A 153 ----SAR---PNIELLPEGQFKYHV-------------DFEHLH--I---G-EETGMICVSRPTNPTGNVI-TDEELMKL 205 (417)
T ss_dssp ----ECC---CEEEEEGGGEEEEEC-------------CGGGCC--C---C-TTEEEEEEESSCTTTCCCC-CHHHHHHH
T ss_pred ----ccc---CcccccCCccccccc-------------CHHHhc--c---c-cCceEEEECCCCCCCCCcc-CHHHHHHH
Confidence 000 111111100 00000 023343 1 2 3566777766677788665 55779999
Q ss_pred HHHHHhcCCEEEEechhcCcccccccc-ee--cccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccc
Q 010250 298 QAVVKKYDILFIADEVICAFGRLGTMF-GC--DKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSH 374 (514)
Q Consensus 298 ~~l~~~~gillI~DEv~tG~gr~G~~~-~~--~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~ 374 (514)
.++|++||+++|+||+|..+ ..+..+ .. ...+....+.++||.+..| +++|++++++++++.+.. ..+
T Consensus 206 ~~~a~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~~~~-------~~~ 276 (417)
T 3g7q_A 206 DRLANQHNIPLVIDNAYGVP-FPGIIFSEARPLWNPNIILCMSLSKLGLPG-SRCGIIIANDKTITAIAN-------MNG 276 (417)
T ss_dssp HHHHHHTTCCEEEECTTCTT-TTCCBCSCCCCCCCTTEEEEEESGGGTCTT-SCCEEEECCHHHHHHHHH-------HHH
T ss_pred HHHHHHcCCEEEEeCCCccc-cccccccccccCCCCCEEEEEechhccCCC-cceEEEEeCHHHHHHHHH-------hhc
Confidence 99999999999999999743 211111 00 1111112245799954445 899999999999988863 244
Q ss_pred cCCCCCcHHHHHHHHHHHHHHh-----hccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCC
Q 010250 375 GFTYSGHPVSCAVAIEALKIYK-----ERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPF 448 (514)
Q Consensus 375 ~~t~~~~pl~~aaa~aal~~~~-----~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~ 448 (514)
..+++.++++++++.+.++... .+.+.++++++.+.+.+.|++. ...++.......|.++++.+.....
T Consensus 277 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~----- 351 (417)
T 3g7q_A 277 IISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWFKDLPI----- 351 (417)
T ss_dssp HHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEECTTCSS-----
T ss_pred ceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEcCCCCC-----
Confidence 5677788898888888776321 1124566777777888888763 3333322223457777888754211
Q ss_pred CCccchHHHHHHHHHHCCcEEEee--------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 449 PPEWGIGAYFGAQCEKHGMLVRVS--------------GDNIMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 449 ~~~~~~~~~~~~~l~~~Gv~~~~~--------------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
....+...|.++||.+.++ .+.|||+++. ++++|++++++|.++++++.+
T Consensus 352 -----~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~~l~~~~~ 415 (417)
T 3g7q_A 352 -----TTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP--EPDKIEAGVKILAEEIERAWR 415 (417)
T ss_dssp -----CHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS--CHHHHHHHHHHHHHHHHHHHH
T ss_pred -----CHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC--CHHHHHHHHHHHHHHHHHHHh
Confidence 1456788899999999863 2369999764 999999999999999987653
No 130
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.91 E-value=1.3e-22 Score=207.67 Aligned_cols=337 Identities=12% Similarity=0.078 Sum_probs=223.6
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ 178 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A 178 (514)
...|||..+ .++.+|.|++|+.+++... .+ ....+...++.+.++++++. +.+++++++||++|++.+
T Consensus 8 ~~~yl~~~~------~~~~~~~v~~a~~~~~~~~-~~----~~~~~~~~~l~~~la~~~g~-~~~~v~~t~g~t~a~~~~ 75 (392)
T 2z9v_A 8 DPVITLTAG------PVNAYPEVLRGLGRTVLYD-YD----PAFQLLYEKVVDKAQKAMRL-SNKPVILHGEPVLGLEAA 75 (392)
T ss_dssp CCSEECSSS------CCCCCHHHHHHTTSCCCCT-TS----HHHHHHHHHHHHHHHHHTTC-SSCCEEESSCTHHHHHHH
T ss_pred CcceeecCC------CcCCCHHHHHHHhcccccc-cc----HHHHHHHHHHHHHHHHHhCC-CCCEEEEeCCchHHHHHH
Confidence 346888643 3467899999988776541 11 11234567889999998853 357899999999999999
Q ss_pred HHHHHHHHhhcCCCCccEEEEEecCCcccceeee-ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250 179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA-SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257 (514)
Q Consensus 179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
++.+. .++++|++.+++||+.....+ ...|... ..++.+..+ ..++
T Consensus 76 ~~~~~--------~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~-------------~~d~ 122 (392)
T 2z9v_A 76 AASLI--------SPDDVVLNLASGVYGKGFGYWAKRYSPHL------------LEIEVPYNE-------------AIDP 122 (392)
T ss_dssp HHHHC--------CTTCCEEEEESSHHHHHHHHHHHHHCSCE------------EEEECCTTS-------------CCCH
T ss_pred HHHhc--------CCCCEEEEecCCcccHHHHHHHHHcCCce------------EEeeCCCCC-------------CCCH
Confidence 98873 334689999999988631111 1112111 111111110 0125
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS 337 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~ 337 (514)
++|++.+.+. +++++|+++++++++|.+.+ +++|.++|++||+++|+||+|+ +|... +.... ..+|+++
T Consensus 123 ~~l~~~l~~~--~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~g~~~--~~~~~--~~~d~~~ 191 (392)
T 2z9v_A 123 QAVADMLKAH--PEITVVSVCHHDTPSGTINP----IDAIGALVSAHGAYLIVDAVSS-FGGMK--THPED--CKADIYV 191 (392)
T ss_dssp HHHHHHHHHC--TTCCEEEEESEEGGGTEECC----HHHHHHHHHHTTCEEEEECTTT-BTTBS--CCGGG--GTCSEEE
T ss_pred HHHHHHHhcC--CCCcEEEEeccCCCCceecc----HHHHHHHHHHcCCeEEEEcccc-cCCcc--ccccc--ccceEEE
Confidence 7788877541 24678888999999998877 8999999999999999999997 54331 22222 2467775
Q ss_pred --hhhhhcCCcccceeEEeCHHHHHHhhhcc-----CCCC------cc--cccCCCCCcHHHHHHHHHHHHHHhhc---c
Q 010250 338 --FAKALSSAYMPIGAILVSPEVSEVIHSQS-----NTLG------SF--SHGFTYSGHPVSCAVAIEALKIYKER---N 399 (514)
Q Consensus 338 --~sK~l~gG~~pig~v~~~~~i~~~l~~~~-----~~~~------~~--~~~~t~~~~pl~~aaa~aal~~~~~~---~ 399 (514)
++|+++|+ .++|++++++++++.+.... ...+ .+ ......+.++.+++++.++++.+.+. +
T Consensus 192 ~s~sK~~~~~-~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~ 270 (392)
T 2z9v_A 192 TGPNKCLGAP-PGLTMMGVSERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEA 270 (392)
T ss_dssp ECSSSTTCCC-SCCEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred ecCcccccCC-CceeEEEECHHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 56988875 56799999999988775311 0000 00 00112345677777777888876543 4
Q ss_pred HHHHHHHHHHHHHhhhhhccCCCcee-E-EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee----
Q 010250 400 IVEQVNKIAPKFQDGVKAFSDSPIIG-E-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS---- 472 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l~~~~~~~-~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~---- 472 (514)
+.++++++++++++.|+++ ...+.. . ....+.++.+.+.+.. ....+.+.|.++ ||.+.++
T Consensus 271 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~L~~~~gi~v~~g~~~~ 338 (392)
T 2z9v_A 271 VWARHALTAKAMRAGVTAM-GLSVWAASDSIASPTTTAVRTPDGV-----------DEKALRQAARARYGVVFSSGRGET 338 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCBSSSSGGGBCTTEEEEECCTTC-----------CHHHHHHHHHHHHCEECEECCGGG
T ss_pred HHHHHHHHHHHHHHHHHHc-CCeeccCCccccCCceEEEECCCCC-----------CHHHHHHHHHhcCCEEEecCCCCC
Confidence 6788888999999999876 333221 1 0113556677664211 145688889887 9999874
Q ss_pred -CCEEEEeCCC-CCCHHHHHHHHHHHHHHHHHHH
Q 010250 473 -GDNIMMSPPF-IMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 473 -g~~iRi~p~~-~~t~e~id~~~~~l~~~l~~~~ 504 (514)
.+.+|+++.. .+|++|+++++++|+++++++.
T Consensus 339 ~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~~ 372 (392)
T 2z9v_A 339 LGKLTRIGHMGPTAQPIYAIAALTALGGAMNAAG 372 (392)
T ss_dssp TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred CCCeEEEeCcccccCHHHHHHHHHHHHHHHHHcC
Confidence 3679999643 7899999999999999987654
No 131
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.90 E-value=2.1e-23 Score=216.27 Aligned_cols=345 Identities=12% Similarity=0.066 Sum_probs=216.3
Q ss_pred EEccCCcccccCCCCCHHHHHHHH--HHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH--HH
Q 010250 103 LDSLAGLWCTALGGSEPRLVAAAT--AQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND--TQ 178 (514)
Q Consensus 103 lD~~s~~~~~~lGh~~p~v~~A~~--~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~--~A 178 (514)
|||..|.....+...+|.|.+++. +.++. ......|..+.....++.+.|++++. .+.+++++++|+++|+. .+
T Consensus 28 i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~-~~~~~~Yp~~~~g~~~lr~~ia~~~~-~~~~~i~~t~G~~~al~~~~~ 105 (423)
T 3ez1_A 28 LNMQRGQPADADFDLSNGLLTVLGAEDVRMD-GLDLRNYPGGVAGLPSARALFAGYLD-VKAENVLVWNNSSLELQGLVL 105 (423)
T ss_dssp EESCCCCCCHHHHHTTGGGGGSCCGGGCEET-TEETTSSCSCTTCCHHHHHHHHHHTT-SCGGGEEECSSCHHHHHHHHH
T ss_pred EecCCCCCChHhCCCcHHHHHHHhhhHHhhc-chhhhCCCCCCCChHHHHHHHHHHhC-CChhhEEEeCCcHHHHHHHHH
Confidence 565555332222333445666664 33321 11001110123345789999999874 45679999999999997 78
Q ss_pred HHHHHHHHhhcCCCC--------ccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChh
Q 010250 179 VKLVWYYNNALGRPN--------KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 250 (514)
Q Consensus 179 lk~a~~~~~~~~~~~--------~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (514)
++.... +.++ +++|++.+++|++........+.... .++... .+
T Consensus 106 ~~~l~~-----~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~-------------~v~~~~------~g---- 157 (423)
T 3ez1_A 106 TFALLH-----GVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELL-------------TVDMQS------DG---- 157 (423)
T ss_dssp HHHHHT-----CCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEE-------------EEEEET------TE----
T ss_pred HHHHhc-----cCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEE-------------eccCCC------CC----
Confidence 776541 1122 47899999999987543332221111 000000 00
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHH-HhcCCEEEEechhcCccccc-c-----
Q 010250 251 EYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVV-KKYDILFIADEVICAFGRLG-T----- 322 (514)
Q Consensus 251 ~~~~~~~~~le~li~~~~~~~~aavivEp-v~~~~G~~~p~~~~L~~l~~l~-~~~gillI~DEv~tG~gr~G-~----- 322 (514)
.++++|++.+.+ ..++++|+++| .++++|.+. +.+.+++|.++| ++||+++|+||+|+.+...+ .
T Consensus 158 ----~d~~~l~~~l~~--~~~~~~v~~~~~~~NPtG~~~-~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~ 230 (423)
T 3ez1_A 158 ----PDVDAVERLAGT--DPSVKGILFVPTYSNPGGETI-SLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPV 230 (423)
T ss_dssp ----ECHHHHHHHHHS--CTTEEEEEECSSSCTTTCCCC-CHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCC
T ss_pred ----CCHHHHHHHHhh--CCCceEEEECCCCCCCCCcCC-CHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCc
Confidence 125778887752 24678888876 466677665 456799999999 99999999999998432222 1
Q ss_pred -ccee----cccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH-Hh
Q 010250 323 -MFGC----DKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI-YK 396 (514)
Q Consensus 323 -~~~~----~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~-~~ 396 (514)
.+.. +..+....+.+|||.+.+| +++|++++++++++.+.. .....+++.+++++.++.++++. ..
T Consensus 231 ~~~~~~~~~~~~~~~i~~~S~sK~~~~G-~r~G~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~ 302 (423)
T 3ez1_A 231 NFVVLARDAGYPDRAFVFASTSKITFAG-AGLGFVASSEDNIRWLSK-------YLGAQSIGPNKVEQARHVKFLTEYPG 302 (423)
T ss_dssp CHHHHHHHHTCTTSEEEEEESTTTSCSS-SSCEEEEECHHHHHHHHH-------HHHHSCSCCCHHHHHHHHHHHHHSTT
T ss_pred chhhhhhccCCCCeEEEEeCchhhccCC-cceEEEEeCHHHHHHHHH-------HHhhhccCCCHHHHHHHHHHHHhccc
Confidence 1111 1112222355899985555 899999999999988864 23446778889998888888775 11
Q ss_pred ---h--ccHHHHHHHHHHHHHhhhhh-ccCCC-cee-EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcE
Q 010250 397 ---E--RNIVEQVNKIAPKFQDGVKA-FSDSP-IIG-EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGML 468 (514)
Q Consensus 397 ---~--~~~~~~~~~~~~~l~~~L~~-l~~~~-~~~-~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~ 468 (514)
+ ++..+.++++.+.+.+.|.+ +...+ .+. .....|.++++.+.... ...+.+.|.++||+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~------------~~~~~~~l~~~gv~ 370 (423)
T 3ez1_A 303 GLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEPV------------ADRVVKLAEAAGVS 370 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSSC------------HHHHHHHHHHTTEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCCc------------HHHHHHHHHHCCcE
Confidence 1 12334444555555565644 23333 222 12345778888886421 45677889999999
Q ss_pred EEee-----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 469 VRVS-----------GDNIMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 469 ~~~~-----------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
+.++ .+.|||+++.. ++++|++++++|.++++++..
T Consensus 371 v~~~g~~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~~~ 417 (423)
T 3ez1_A 371 LTPAGATYPAGQDPHNRNLRLAPTRP-PVEEVRTAMQVVAACIRLATE 417 (423)
T ss_dssp CCCTTTTSSTTCCSSSCEEEECCSSS-CHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCcccccCCCCCCCCeEEEEcCCC-CHHHHHHHHHHHHHHHHHHHH
Confidence 9872 25799998655 999999999999999987654
No 132
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.90 E-value=1.7e-22 Score=211.51 Aligned_cols=351 Identities=16% Similarity=0.120 Sum_probs=212.6
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT 177 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~ 177 (514)
.|+.||||.++.++..+ .+++.+++. ... ..+. ..+...+|++.|++++ +.+++++++||++|++.
T Consensus 40 ~~~~ylD~~~~~~~~~~---~~~~~~a~~----~~~---~~y~-~~~~~~~l~~~la~~~---~~~~~~~~~~gt~a~~~ 105 (456)
T 2ez2_A 40 SKDIYIDLLTDSGTNAM---SDKQWAGMM----MGD---EAYA-GSENFYHLERTVQELF---GFKHIVPTHQGRGAENL 105 (456)
T ss_dssp GGGCSEECSCSSSCCCC---CHHHHHHHT----TCC---CCSS-SCHHHHHHHHHHHHHH---CCSEEEEESSHHHHHHH
T ss_pred cccceeeeccccCCccC---CHHHHHHhh----cch---hhcc-cChhHHHHHHHHHHHh---CCCcEEEeCCcHHHHHH
Confidence 46789999887554322 466666654 211 1112 3456788999999998 34689999999999999
Q ss_pred HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
+++.+. .++ + |+.+++||+.+...+...|......... +... ......|.+ ..++
T Consensus 106 al~~l~-------~~g--d-i~~~~~~~~~~~~~~~~~G~~~~~v~~~---~~~~-~~~~~~~~~-----------~~d~ 160 (456)
T 2ez2_A 106 LSQLAI-------KPG--Q-YVAGNMYFTTTRYHQEKNGAVFVDIVRD---EAHD-AGLNIAFKG-----------DIDL 160 (456)
T ss_dssp HHHHHC-------CTT--C-EEEESSCCHHHHHHHHHTTCEEEECBCG---GGGC-TTCCCSCTT-----------CBCH
T ss_pred HHHHhC-------CCC--C-EeccccccchhHHHHHHcCCEEEEeccc---cccc-ccccccccC-----------CCCH
Confidence 998773 133 2 7888999887655554444322111100 0000 000000000 0125
Q ss_pred HHHHHHHHHhCCCcEEEEEEc-cccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC----------cccccccce-
Q 010250 258 NNLEDLILKEGPETIAAFIAE-PVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA----------FGRLGTMFG- 325 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivE-pv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG----------~gr~G~~~~- 325 (514)
++|++++.......+++|+++ |.|+.+|. +.+.+++++|+++|++||+++|+||+|+. +++.|..+.
T Consensus 161 ~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~-~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~ 239 (456)
T 2ez2_A 161 KKLQKLIDEKGAENIAYICLAVTVNLAGGQ-PVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAE 239 (456)
T ss_dssp HHHHHHHHHHCGGGEEEEEEESSBTTTTSB-CCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHH
T ss_pred HHHHHHHHhccccceeEEEEeccCCCCCCc-cCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhh
Confidence 788888875432356888888 55557885 56789999999999999999999999983 335553221
Q ss_pred -ecccCCCCchhchh-hhhcCCcccceeEEe-CHHHHHHhhhccCCCCccccc-CCCC-CcHHHHHH-HHHHHHHHhhcc
Q 010250 326 -CDKYSIKPDLVSFA-KALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHG-FTYS-GHPVSCAV-AIEALKIYKERN 399 (514)
Q Consensus 326 -~~~~gv~pDiv~~s-K~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~-~t~~-~~pl~~aa-a~aal~~~~~~~ 399 (514)
.+..+..+|++++| |.++++. ..|++++ ++++++.+.... ...++ .++. .++..+++ +.+.++.++ ++
T Consensus 240 ~~~~~~~~~d~~~~S~kk~~~~~-~gG~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~a~a~~~~~~~~-~~ 313 (456)
T 2ez2_A 240 IVHEMFSYADGCTMSGKKDCLVN-IGGFLCMNDDEMFSSAKELV----VVYEGMPSYGGLAGRDMEAMAIGLREAMQ-YE 313 (456)
T ss_dssp HHHHHHTTCSEEEEETTTTTCCS-SCEEEEESCHHHHHHHHHHH----HHHTCCTTTTTCCHHHHHHHHHHHHHHTC-HH
T ss_pred hhhhhcccCCEEEEeCcccCCCC-ceeEEEECCHHHHHHHHHHH----hhccCcccccCcchhHHHHHHHHHHHHhH-HH
Confidence 01223447888774 6565421 3677887 688887765311 00111 1222 23333333 555554432 35
Q ss_pred HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEcc--CCCCCCCCCCccch-HHHHHHHH-HHCCcEEEee---
Q 010250 400 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFAD--NKSPNEPFPPEWGI-GAYFGAQC-EKHGMLVRVS--- 472 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~--~~~~~~~~~~~~~~-~~~~~~~l-~~~Gv~~~~~--- 472 (514)
+.++.+++.+++++.|+++ +.+++.. ..|.++.+.+.. .... ...+ ...+...| .++||.+.+.
T Consensus 314 ~~~~~~~~~~~l~~~L~~~-g~~~~~p--~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~L~~~~gv~~~~~g~~ 384 (456)
T 2ez2_A 314 YIEHRVKQVRYLGDKLKAA-GVPIVEP--VGGHAVFLDARRFCEHLT------QDEFPAQSLAASIYVETGVRSMERGII 384 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCBCSS--CCSSEEEEEHHHHTTTSC------GGGCHHHHHHHHHHHHHSEECEEESHH
T ss_pred HHHHHHHHHHHHHHHHhcC-CCccccC--CCceEEEEEhHHhcCCCC------hhhccHHHHHHHHHHhcCeeeeccccc
Confidence 6777788888888888874 3333222 235566666532 1100 1112 34456677 6889986431
Q ss_pred ---------------CCEEEEeCCCC-CCHHHHHHHHHHHHHHHHHH
Q 010250 473 ---------------GDNIMMSPPFI-MSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 473 ---------------g~~iRi~p~~~-~t~e~id~~~~~l~~~l~~~ 503 (514)
.+.|||++++. +|+++|++++++|++++++.
T Consensus 385 ~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~~ 431 (456)
T 2ez2_A 385 SAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHK 431 (456)
T ss_dssp HHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHHTG
T ss_pred ccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhhh
Confidence 15799999987 89999999999999988653
No 133
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.90 E-value=2.1e-22 Score=214.40 Aligned_cols=340 Identities=14% Similarity=0.078 Sum_probs=207.3
Q ss_pred CCCHHHHHHHHHHHhcCCc----cccccccCCchHHHHHHHHHHhcCcC-CCCeE--EEeCChhHHHHHHHHHHHHHHhh
Q 010250 116 GSEPRLVAAATAQLNTLPF----YHSFWNRTTKPSLDLAKELLEMFTAS-KMAKV--FFTNSGSEANDTQVKLVWYYNNA 188 (514)
Q Consensus 116 h~~p~v~~A~~~~l~~~~~----~~~~~~~~~~~~~ela~~L~~~~~~~-~~~~v--~~~~sGseA~~~Alk~a~~~~~~ 188 (514)
|+++.+.+++.+++..... .+..+........+++++++++++.. ..+++ +|++||++|++.++++++.+..+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~ 186 (514)
T 3mad_A 107 HGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARA 186 (514)
T ss_dssp CCCHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhh
Confidence 3567777777776653211 11111112233455667778877422 11466 99999999999999999755322
Q ss_pred cCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC
Q 010250 189 LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG 268 (514)
Q Consensus 189 ~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~ 268 (514)
.....+++||+..++|++....... .|.. +..+++...++ .++++|++++.
T Consensus 187 ~~g~~~d~Vi~~~~~~~~~~~~~~~-~G~~------------v~~v~~~~~~~-------------~d~~~Le~~i~--- 237 (514)
T 3mad_A 187 TKGITAPEAVVPVSAHAAFDKAAQY-FGIK------------LVRTPLDADYR-------------ADVAAMREAIT--- 237 (514)
T ss_dssp HHCCSSCEEEEETTSCTHHHHHHHH-HTCE------------EEEECBCTTSC-------------BCHHHHHHHCC---
T ss_pred hcCCCCCeEEEeCccchHHHHHHHH-cCCe------------eEEeeeCCCCC-------------CCHHHHHHHhc---
Confidence 1112346888888888875322221 1211 11122211111 11577777764
Q ss_pred CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc-----ccccc---cceecccCCCCchhchhh
Q 010250 269 PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF-----GRLGT---MFGCDKYSIKPDLVSFAK 340 (514)
Q Consensus 269 ~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~-----gr~G~---~~~~~~~gv~pDiv~~sK 340 (514)
+++++|+++++++++|.+.+ +++|+++|++||++||+||+|+|+ +++|. .+.....|++..+.+++|
T Consensus 238 -~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K 312 (514)
T 3mad_A 238 -PNTVVVAGSAPGYPHGVVDP----IPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLEGVTSVSADTHK 312 (514)
T ss_dssp -TTEEEEEEETTCTTTCCCCC----HHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTSTTCCEEEECTTT
T ss_pred -cCCEEEEEeCCCCCCccccC----HHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcccccCCCCcEEEECchh
Confidence 46889999999999998876 999999999999999999999976 34444 233344455322335669
Q ss_pred hhcCCcccceeEEeCHHHHHHhhhcc--CCCC-----cccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Q 010250 341 ALSSAYMPIGAILVSPEVSEVIHSQS--NTLG-----SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQD 413 (514)
Q Consensus 341 ~l~gG~~pig~v~~~~~i~~~l~~~~--~~~~-----~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~ 413 (514)
.+.+| .++|+++++++.+....... ...+ ....++++..+.+++.+++..+....-+++.+++.++++++.+
T Consensus 313 ~l~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~ 391 (514)
T 3mad_A 313 YGYGA-KGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKA 391 (514)
T ss_dssp TTCCC-SSCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCC-CCeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 87776 68999999877654432100 0000 0012222222234444444444332224678888899999999
Q ss_pred hhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--CCEEEEeCC-CCCCHHHHH
Q 010250 414 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--GDNIMMSPP-FIMSPEEVD 490 (514)
Q Consensus 414 ~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--g~~iRi~p~-~~~t~e~id 490 (514)
.|+++....++... ..++.+..... ....+.+.|.++||++... ++.+|++++ ...++++|+
T Consensus 392 ~L~~~~g~~~~~~~---~~~~~~~~~~~------------~~~~l~~~L~~~Gi~v~g~~~~~~~Ri~~~~~~~~~e~i~ 456 (514)
T 3mad_A 392 GVRAIPSLKILGDP---LWVIAVASDEL------------NIYQVMEEMAGRGWRLNGLHRPPAFHVALTLRHTEPGVVD 456 (514)
T ss_dssp HHHTSTTCEESSCC---SSEEEEECSSS------------CHHHHHHHHHTTTCBCEEETTTTEEEEECCGGGGSTTHHH
T ss_pred HHhhCCCeEEeCCC---eEEEEEeCCCC------------CHHHHHHHHHhcCCEeccCCCCCeEEEEEecCCCCHHHHH
Confidence 99876332222211 23445543211 1456889999999988433 467999987 455679999
Q ss_pred HHHHHHHHHHHHHHH
Q 010250 491 ELISKYGKALKATEE 505 (514)
Q Consensus 491 ~~~~~l~~~l~~~~~ 505 (514)
+++++|+++++++.+
T Consensus 457 ~~l~~L~~~l~~~~~ 471 (514)
T 3mad_A 457 RFLADLQDAVAQVRA 471 (514)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999987654
No 134
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.90 E-value=3.9e-23 Score=208.59 Aligned_cols=326 Identities=15% Similarity=0.138 Sum_probs=200.9
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV 179 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al 179 (514)
..+|||.++ +.++.+|+|++|+.+++.. +. .. .+..+...+++++++++++ ...+++|++||++|++.++
T Consensus 7 ~~~id~~~~----~~~~~~~~v~~a~~~~~~~--~~-~~-~~~~~~~~~l~~~la~~~g--~~~~v~~~~~gt~a~~~al 76 (356)
T 1v72_A 7 PPALGFSSD----NIAGASPEVAQALVKHSSG--QA-GP-YGTDELTAQVKRKFCEIFE--RDVEVFLVPTGTAANALCL 76 (356)
T ss_dssp CCCCBCSCG----GGCCCCHHHHHHHHHTTSS--CC-CS-TTCSHHHHHHHHHHHHHHT--SCCEEEEESCHHHHHHHHH
T ss_pred CceEeeccC----CccCCCHHHHHHHHhhccC--cc-cc-cccchHHHHHHHHHHHHhC--CCCcEEEeCCccHHHHHHH
Confidence 468999876 2367899999999988632 11 11 2245667889999999985 2345899999999999999
Q ss_pred HHHHHHHhhcCCCCccEEEEEecCCcccceee--eecC--CCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250 180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIA--ASLS--GLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255 (514)
Q Consensus 180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~--~~~s--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (514)
+.++ ..++.|++.+ .+|+.+... +... |... ..++.+ .+. .
T Consensus 77 ~~~~--------~~gd~vi~~~-~~~~~~~~~~~~~~~~~g~~~------------~~v~~~-~~~-------------~ 121 (356)
T 1v72_A 77 SAMT--------PPWGNIYCHP-ASHINNDECGAPEFFSNGAKL------------MTVDGP-AAK-------------L 121 (356)
T ss_dssp HTSC--------CTTEEEEECT-TSHHHHSSTTHHHHHTTSCEE------------EECCCG-GGC-------------C
T ss_pred HHhc--------CCCCEEEEcC-ccchhhhhchHHHHHhCCcEE------------EEecCC-CCe-------------E
Confidence 8763 2234566554 455544322 2222 2211 111111 010 1
Q ss_pred HHHHHHH-HHHHh---CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc--cccccceeccc
Q 010250 256 LANNLED-LILKE---GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG--RLGTMFGCDKY 329 (514)
Q Consensus 256 ~~~~le~-li~~~---~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g--r~G~~~~~~~~ 329 (514)
++++|++ .+.+. ...++++|++++.++ +|.+ ++.+++++|+++|++||+++|+||+|..+. ..|.. ...+
T Consensus 122 d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~ 197 (356)
T 1v72_A 122 DIVRLRERTREKVGDVHTTQPACVSITQATE-VGSI-YTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCS--PAEM 197 (356)
T ss_dssp CHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCC-CCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCC--TTTT
T ss_pred cHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCcc-CCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCC--HHHh
Confidence 2567777 66431 112688999998654 7754 577999999999999999999999997431 11211 1112
Q ss_pred C--CCCchhc--hhhhhcCCcccce--eEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc---cH
Q 010250 330 S--IKPDLVS--FAKALSSAYMPIG--AILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER---NI 400 (514)
Q Consensus 330 g--v~pDiv~--~sK~l~gG~~pig--~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~---~~ 400 (514)
+ ...|+++ ++|+ | .|+| ++++++++++.+.... . ..+........ ++.++++.++++ ++
T Consensus 198 ~~~~~~d~~~~s~sK~--g--~~~G~g~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~---~~~~~~~~l~~~~~~~~ 265 (356)
T 1v72_A 198 TWKAGVDALSFGATKN--G--VLAAEAIVLFNTSLATEMSYRR----K-RAGHLSSKMRF---LSAQIDAYLTDDLWLRN 265 (356)
T ss_dssp TGGGTCCEEEECCGGG--T--CSSCEEEEESSGGGHHHHHHHH----H-HTTCCCSSTHH---HHHHHHHHTSTTHHHHH
T ss_pred hhhhcCCEEEEecccC--C--CcCccEEEEECHHHHhhHHHHh----h-ccCchhhhHHH---HHHHHHHHHHhhhHHHH
Confidence 1 1356554 6787 3 4777 6667899888765310 0 11111221222 233344544432 34
Q ss_pred HHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---CCEEE
Q 010250 401 VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GDNIM 477 (514)
Q Consensus 401 ~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~~iR 477 (514)
.++.+++++++++.|+++....+. ....+.++.+.+. ..+.+.|.++||.+.++ .+.+|
T Consensus 266 ~~~~~~~~~~l~~~L~~~~g~~~~--~~~~~~~~~~~~~----------------~~~~~~l~~~gi~v~~g~~~~~~iR 327 (356)
T 1v72_A 266 ARKANAAAQRLAQGLEGLGGVEVL--GGTEANILFCRLD----------------SAMIDALLKAGFGFYHDRWGPNVVR 327 (356)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEEEE--SCCCSSEEEEEEC----------------HHHHHHHHHTTCBCBCSSSSTTEEE
T ss_pred HHHHHHHHHHHHHHHhhCCCcEEc--cCCCccEEEEEcC----------------HHHHHHHHhcCeEEeccccCCCeEE
Confidence 667778888888888764221111 1123445555542 13778889999999854 36799
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 478 MSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 478 i~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
+++++.+|++++++++++|++++++..
T Consensus 328 i~~~~~~~~~~i~~~~~~l~~~l~~~~ 354 (356)
T 1v72_A 328 FVTSFATTAEDVDHLLNQVRLAADRTQ 354 (356)
T ss_dssp EECCTTCCHHHHHHHHHHHHHTC----
T ss_pred EEecCCCCHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999876543
No 135
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.90 E-value=4.1e-22 Score=206.92 Aligned_cols=304 Identities=13% Similarity=0.138 Sum_probs=202.0
Q ss_pred CCchHHHHHHHHHHhcCcCC--------CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee
Q 010250 142 TTKPSLDLAKELLEMFTASK--------MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS 213 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~--------~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~ 213 (514)
..+....+++.+.+.++... .++|++++|+++|++.+++... ..+++|++.+++|++.......
T Consensus 80 ~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~ 151 (425)
T 2r2n_A 80 IPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMII--------NPGDNVLLDEPAYSGTLQSLHP 151 (425)
T ss_dssp CHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHC--------CTTCEEEEESSCCHHHHHHHGG
T ss_pred CHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhC--------CCCCEEEEeCCCcHHHHHHHHH
Confidence 33455566666655543211 2689999999999999998873 2347899999999987543322
Q ss_pred cCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC--------CCcEEEEEEcc-ccCCC
Q 010250 214 LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG--------PETIAAFIAEP-VIGAG 284 (514)
Q Consensus 214 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~--------~~~~aavivEp-v~~~~ 284 (514)
. |.... .++... + ..+.++|++++.+.. ..++++|++.| .++.+
T Consensus 152 ~-g~~~~------------~v~~~~-----------~---~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPt 204 (425)
T 2r2n_A 152 L-GCNII------------NVASDE-----------S---GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPT 204 (425)
T ss_dssp G-TCEEE------------EECEET-----------T---EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTT
T ss_pred c-CCEEE------------EeCcCC-----------C---CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCC
Confidence 2 21110 011100 0 012577888875321 13466777755 56777
Q ss_pred CcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eeccc---CCCCchhchhhhhcCCcccceeEEeCHHHHH
Q 010250 285 GVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKY---SIKPDLVSFAKALSSAYMPIGAILVSPEVSE 360 (514)
Q Consensus 285 G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~---gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~ 360 (514)
|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|... ....+ +....+.+|||.++.| +++|++++++++++
T Consensus 205 G~~-~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~G-lRiG~~~~~~~l~~ 282 (425)
T 2r2n_A 205 GNS-LTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSG-LRIGFLTGPKPLIE 282 (425)
T ss_dssp CCC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCST-TCCEEEEEEHHHHH
T ss_pred CCc-CCHHHHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhccCc-cceEEEecCHHHHH
Confidence 866 467889999999999999999999999886666421 11112 2223344799999855 89999999999988
Q ss_pred HhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-------ccHHHHHHHHHHHHHhhhhhc-cCCCcee-EEEeee
Q 010250 361 VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-------RNIVEQVNKIAPKFQDGVKAF-SDSPIIG-EIRGTG 431 (514)
Q Consensus 361 ~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-------~~~~~~~~~~~~~l~~~L~~l-~~~~~~~-~v~g~g 431 (514)
.+.. .....+++.++++++++.++|+.+.+ +++.++++++.+++.+.|++. .. +.. .....|
T Consensus 283 ~l~~-------~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~--~~~~~~p~~g 353 (425)
T 2r2n_A 283 RVIL-------HIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTG--LAEWHVPAAG 353 (425)
T ss_dssp HHHH-------HHHTTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS--SEEECCCSBS
T ss_pred HHHH-------HHHHhcCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CeEEeCCCce
Confidence 8863 23345678899999999998886432 234556666777777777653 21 111 123456
Q ss_pred eeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 432 LILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------GDNIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 432 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------g~~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
.++++++..... ..+.+.+.|.++||.+.++ .+.+||++.. .++++|++++++|+++++
T Consensus 354 ~~~~~~~~~~~~----------~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~l~ 422 (425)
T 2r2n_A 354 MFLWIKVKGIND----------VKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS-ASPEQMDVAFQVLAQLIK 422 (425)
T ss_dssp SEEEEEETTCSC----------CHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSS-CCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCC----------HHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHHHHH
Confidence 778888864211 1223567888999999863 2579999653 699999999999999886
Q ss_pred H
Q 010250 502 A 502 (514)
Q Consensus 502 ~ 502 (514)
+
T Consensus 423 ~ 423 (425)
T 2r2n_A 423 E 423 (425)
T ss_dssp H
T ss_pred H
Confidence 4
No 136
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.90 E-value=1.8e-22 Score=210.65 Aligned_cols=309 Identities=16% Similarity=0.113 Sum_probs=194.1
Q ss_pred HHHHHHHHHHhc----C-cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCc-------------cEEEEE-ecCCcc
Q 010250 146 SLDLAKELLEMF----T-ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK-------------KKFIAR-QKSYHG 206 (514)
Q Consensus 146 ~~ela~~L~~~~----~-~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~-------------~~ii~~-~~~yHG 206 (514)
..++.+.|++++ + ..+.++|+|++||++|++.+++.+.. ++. .+||+. +++|++
T Consensus 85 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~-------~gd~~~~~~~~~~g~~~~vi~~~~p~~~~ 157 (444)
T 3if2_A 85 DSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGG-------AFVNEHSQDKESKSVDKSILLPLTPEYIG 157 (444)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSE-------EEECC-------CEEEEEEEESSSSCCGG
T ss_pred CHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhC-------CCccccccccccccccceEEEeCCCCccc
Confidence 355666666654 1 23568999999999999999987631 111 046654 888988
Q ss_pred cceeeeecCCCccccCCCCCCCCcccccCCCC-----cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcccc
Q 010250 207 STLIAASLSGLPALHQKFDLPAPFVLHTDCPH-----YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI 281 (514)
Q Consensus 207 ~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~ 281 (514)
.......... ....+ +.+..++... .|. .++++|++.+.+.. +++++|+++..+
T Consensus 158 ~~~~~~~~~~----~~~~~---~~~~~~~~~~~~g~~~~~-------------~d~~~l~~~l~~~~-~~~~~v~i~~p~ 216 (444)
T 3if2_A 158 YSDVHVEGQH----FAAVL---PHIDEVTHDGEEGFFKYR-------------VDFEALENLPALKE-GRIGAICCSRPT 216 (444)
T ss_dssp GTTCCSSSCC----EEECC---CEEEEEEETTEEEEEEEE-------------CCHHHHHTCHHHHT-TCEEEEEEESSC
T ss_pred hhhcccccch----hhccC---ceEEecccccccCccccC-------------CCHHHHHHHHHhcC-CCceEEEeCCCC
Confidence 7543211000 00000 1111111110 000 01467777654333 346666665556
Q ss_pred CCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-e--cccCCCCchhchhhhhcCCcccceeEEeCHHH
Q 010250 282 GAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-C--DKYSIKPDLVSFAKALSSAYMPIGAILVSPEV 358 (514)
Q Consensus 282 ~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~--~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i 358 (514)
+++|.+. +.+.+++|.++|++||+++|+||+|..+ ..+..+. . ...+...++.++||.+..| +++|++++++++
T Consensus 217 nptG~~~-~~~~l~~i~~~a~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G-~r~G~~~~~~~l 293 (444)
T 3if2_A 217 NPTGNVL-TDEEMAHLAEIAKRYDIPLIIDNAYGMP-FPNIIYSDAHLNWDNNTILCFSLSKIGLPG-MRTGIIVADAKV 293 (444)
T ss_dssp TTTCCCC-CHHHHHHHHHHHHHTTCCEEEECTTCTT-TTCCBCSCCCCCCCTTEEEEEESTTTTCGG-GCCEEEECCHHH
T ss_pred CCCCCcC-CHHHHHHHHHHHHHCCCEEEEECCCCCc-ccccccccccccCCCCEEEEechhhccCCC-CceEEEEECHHH
Confidence 7778755 5677999999999999999999999732 1111110 0 1122223355799974445 899999999999
Q ss_pred HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-----hccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeee
Q 010250 359 SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-----ERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGL 432 (514)
Q Consensus 359 ~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-----~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~ 432 (514)
++.+.. ..+..+++.++++++++.+.++... .+.+.++++++.+.+.+.|.+. ....+.......|.
T Consensus 294 ~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~ 366 (444)
T 3if2_A 294 IEAVSA-------MNAVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAI 366 (444)
T ss_dssp HHHHHH-------HHHHHHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSS
T ss_pred HHHHHH-------HHHhccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccE
Confidence 988864 2344567778888888887776322 1235566777777787777653 33332222234577
Q ss_pred eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---------------CEEEEeCCCCCCHHHHHHHHHHHH
Q 010250 433 ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---------------DNIMMSPPFIMSPEEVDELISKYG 497 (514)
Q Consensus 433 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---------------~~iRi~p~~~~t~e~id~~~~~l~ 497 (514)
++++.+..... ....+...|.++||.+.++. +.|||+++. ++++|++++++|.
T Consensus 367 ~~~~~~~~~~~----------~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~--~~e~i~~~l~~l~ 434 (444)
T 3if2_A 367 FLWLWFKDLPI----------STLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA--DEQTLIDGIKVIG 434 (444)
T ss_dssp EEEEEETTCSS----------CHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS--CHHHHHHHHHHHH
T ss_pred EEEEEcCCCCC----------CHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC--CHHHHHHHHHHHH
Confidence 88888864211 14567888999999998641 369999875 9999999999999
Q ss_pred HHHHHHH
Q 010250 498 KALKATE 504 (514)
Q Consensus 498 ~~l~~~~ 504 (514)
++++++.
T Consensus 435 ~~~~~~~ 441 (444)
T 3if2_A 435 EVVRELY 441 (444)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9987654
No 137
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.90 E-value=8.4e-23 Score=210.26 Aligned_cols=327 Identities=13% Similarity=0.067 Sum_probs=213.4
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV 179 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al 179 (514)
+.||||.++... ++ |++++++.++++...+. +.+...++++.++++++ .+++++++||++|++.++
T Consensus 30 ~~~id~~~~~~~--~~---~~v~~a~~~~~~~~~y~------~~~~~~~l~~~la~~~~---~~~~v~~~~Gt~a~~~~l 95 (399)
T 2oga_A 30 VPFLDLKAAYEE--LR---AETDAAIARVLDSGRYL------LGPELEGFEAEFAAYCE---TDHAVGVNSGMDALQLAL 95 (399)
T ss_dssp BCSCCHHHHHHH--TH---HHHHHHHHHHHHHTCCS------SSHHHHHHHHHHHHHTT---SSEEEEESCHHHHHHHHH
T ss_pred CcccccCcCCCC--CC---HHHHHHHHHHHhcCCCC------CchhHHHHHHHHHHHHC---CCeEEEecCHHHHHHHHH
Confidence 568999877543 33 99999999998753211 23566889999999973 347899999999999999
Q ss_pred HHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC-cccCCCCCCChhHHHHHHHH
Q 010250 180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGETEEEYSTRLAN 258 (514)
Q Consensus 180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 258 (514)
+.+. . .++++|++.+++|++.... +...|.... .++... .+. .+++
T Consensus 96 ~~~~------~-~~gd~vl~~~~~~~~~~~~-~~~~g~~~~------------~~~~~~~~~~-------------~d~~ 142 (399)
T 2oga_A 96 RGLG------I-GPGDEVIVPSHTYIASWLA-VSATGATPV------------PVEPHEDHPT-------------LDPL 142 (399)
T ss_dssp HHTT------C-CTTCEEEEESSSCTHHHHH-HHHTTCEEE------------EECBCSSSSS-------------BCHH
T ss_pred HHhC------C-CCcCEEEECCCccHHHHHH-HHHCCCEEE------------EEecCCCCCC-------------cCHH
Confidence 8762 1 3346899999999985432 222222111 111110 011 1146
Q ss_pred HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhch
Q 010250 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF 338 (514)
Q Consensus 259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~ 338 (514)
+|++.+. +++++|+++ +.+|.+.+ +++|.++|++||+++|+||+|+ +|..... ..++..+|++++
T Consensus 143 ~l~~~i~----~~~~~v~~~---n~tG~~~~----l~~i~~l~~~~~~~li~Dea~~-~g~~~~~---~~~~~~~di~~~ 207 (399)
T 2oga_A 143 LVEKAIT----PRTRALLPV---HLYGHPAD----MDALRELADRHGLHIVEDAAQA-HGARYRG---RRIGAGSSVAAF 207 (399)
T ss_dssp HHHHHCC----TTEEEECCB---CGGGCCCC----HHHHHHHHHHHTCEECEECTTC-TTCEETT---EETTCTTCEEEE
T ss_pred HHHHhcC----CCCeEEEEe---CCcCCccC----HHHHHHHHHHcCCEEEEECccc-ccCccCC---eecccccCEEEE
Confidence 7776664 356777743 34576665 9999999999999999999997 3322111 123333688877
Q ss_pred ----hhhhcCCcccceeEEeC-HHHHHHhhhccCCC--Ccc---cccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHH
Q 010250 339 ----AKALSSAYMPIGAILVS-PEVSEVIHSQSNTL--GSF---SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIA 408 (514)
Q Consensus 339 ----sK~l~gG~~pig~v~~~-~~i~~~l~~~~~~~--~~~---~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~ 408 (514)
+|.+++.+ ++|+++++ +++++.+......- ..+ ..+.++..++++++++.++++.++ .+.++.+++.
T Consensus 208 S~~~sK~~~~~G-~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~--~~~~~~~~~~ 284 (399)
T 2oga_A 208 SFYPGKNLGCFG-DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHLD--SWNGRRSALA 284 (399)
T ss_dssp ECCTTSSSCCSS-CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHHH
T ss_pred eCCCCccCCcCC-ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 49998733 78888886 88877765321000 001 113345668999999988888664 3567777888
Q ss_pred HHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--------------
Q 010250 409 PKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-------------- 473 (514)
Q Consensus 409 ~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-------------- 473 (514)
+++++.|+++....+.... .+.+.++.+.+... ....+.+.|.++||.+++..
T Consensus 285 ~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~ 352 (399)
T 2oga_A 285 AEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRTE------------RRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEA 352 (399)
T ss_dssp HHHHHHTTTCTTCBCCCCCTTEECCCSSEEEECS------------SHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTS
T ss_pred HHHHHHhccCCCccccCCCCCCcceeEEEEEECC------------CHHHHHHHHHHCCCceecCCCCccccchhhcccC
Confidence 8888888775322111100 12222222333211 14568889999999987532
Q ss_pred --------------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 474 --------------DNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 474 --------------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
+.|||+++..+|++|+++++++|+++++++
T Consensus 353 ~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~l 396 (399)
T 2oga_A 353 PPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAERV 396 (399)
T ss_dssp CCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHSC
T ss_pred CCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 359999999999999999999999988654
No 138
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.90 E-value=9.1e-23 Score=205.38 Aligned_cols=320 Identities=15% Similarity=0.103 Sum_probs=212.6
Q ss_pred CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC-CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCcc
Q 010250 117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS-KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 195 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~-~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~ 195 (514)
.+|+|++|+.+++.. +. +....+...++.+.++++++.. +.+++++++||++|++.+++.+. + +
T Consensus 11 ~~~~v~~a~~~~~~~--~~---~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~---------~-d 75 (353)
T 2yrr_A 11 IPERVQKALLRPMRG--HL---DPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLD---------R-G 75 (353)
T ss_dssp CCHHHHGGGGSCCCC--TT---CHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCS---------C-C
T ss_pred CCHHHHHHHhccccc--cc---CHHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhc---------C-C
Confidence 579999998877654 11 1112345678999999988532 35789999999999999998663 2 6
Q ss_pred EEEEEecCCccccee-eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEE
Q 010250 196 KFIARQKSYHGSTLI-AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAA 274 (514)
Q Consensus 196 ~ii~~~~~yHG~t~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aa 274 (514)
+|++.+++||+.... .....|... ..++.+..+. .++++|++.+.+. ++++
T Consensus 76 ~vl~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~-------------~d~~~l~~~l~~~---~~~~ 127 (353)
T 2yrr_A 76 PVLVLVNGAFSQRVAEMAALHGLDP------------EVLDFPPGEP-------------VDPEAVARALKRR---RYRM 127 (353)
T ss_dssp CEEEEECSHHHHHHHHHHHHTTCCE------------EEEECCTTSC-------------CCHHHHHHHHHHS---CCSE
T ss_pred cEEEEcCCCchHHHHHHHHHcCCce------------EEEeCCCCCC-------------CCHHHHHHHHHhC---CCCE
Confidence 799999999985211 111112111 1111111110 1157788877642 4567
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccceeE
Q 010250 275 FIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGAI 352 (514)
Q Consensus 275 vivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig~v 352 (514)
|+++++++++|.+.+ +++|.++|++||+++|+||+|+ +|... .....+ .+|+++ ++|+++|+ .++|++
T Consensus 128 v~~~~~~nptG~~~~----~~~i~~l~~~~~~~li~D~a~~-~~~~~--~~~~~~--~~d~~~~s~~K~~~~~-~g~G~~ 197 (353)
T 2yrr_A 128 VALVHGETSTGVLNP----AEAIGALAKEAGALFFLDAVTT-LGMLP--FSMRAM--GVDYAFTGSQKCLSAP-PGLAPI 197 (353)
T ss_dssp EEEESEETTTTEECC----HHHHHHHHHHHTCEEEEECTTT-TTTSC--CCHHHH--TCSEEECCTTSTTCCC-SSCEEE
T ss_pred EEEEccCCCcceecC----HHHHHHHHHHcCCeEEEEcCcc-ccccc--cccccc--CceEEEecCcccccCC-CceEEE
Confidence 888889999998877 8999999999999999999994 76542 222223 357765 46988875 468999
Q ss_pred EeCHHHHHHhhh-ccCCC------Ccc-cccCCCCCcHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHhhhhhccCC
Q 010250 353 LVSPEVSEVIHS-QSNTL------GSF-SHGFTYSGHPVSCAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAFSDS 421 (514)
Q Consensus 353 ~~~~~i~~~l~~-~~~~~------~~~-~~~~t~~~~pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~ 421 (514)
++++++++.+.. ..... +.. .....++.++.+++++.++++.+.+. ++.++++++++++.+.|+++ +.
T Consensus 198 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 276 (353)
T 2yrr_A 198 AASLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GF 276 (353)
T ss_dssp EECHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred EECHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 999998877641 00000 000 01123345677777778888877543 46788888999999999875 32
Q ss_pred CceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCCCHHHHH-HHHHH
Q 010250 422 PIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSPEEVD-ELISK 495 (514)
Q Consensus 422 ~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~t~e~id-~~~~~ 495 (514)
.........+.++.+.+.+.. ....+.+.|.++||.+.++ .+.+|++++...+++|++ +++++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~ 345 (353)
T 2yrr_A 277 RPYPKASPLPTVLVVRPPEGV-----------DADRLVRALYAEGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKA 345 (353)
T ss_dssp EESCSSSBCTTEEEEECCTTC-----------CHHHHHHHHHHTTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHH
T ss_pred ccccCccCCCeEEEEECCCCC-----------CHHHHHHHHHHCCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHH
Confidence 222111113445566663211 1456888999999999864 257999987788999999 99999
Q ss_pred HHHHHH
Q 010250 496 YGKALK 501 (514)
Q Consensus 496 l~~~l~ 501 (514)
|+++++
T Consensus 346 l~~~l~ 351 (353)
T 2yrr_A 346 LDRALA 351 (353)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998875
No 139
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.90 E-value=4.5e-22 Score=202.36 Aligned_cols=339 Identities=14% Similarity=0.132 Sum_probs=215.1
Q ss_pred EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccc----cccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250 101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYH----SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 176 (514)
Q Consensus 101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~----~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~ 176 (514)
.|||+.++ +..+|.+++++.+++.+..... .......+...+++++++++++. +.+++++++||++|++
T Consensus 2 iyld~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~i~~~~g~~~a~~ 74 (382)
T 4hvk_A 2 AYFDYTSA------KPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNG-GGGTVVFTSGATEANN 74 (382)
T ss_dssp CBCBTTTC------CCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTC-TTEEEEEESSHHHHHH
T ss_pred EeecCCCc------CCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCC-CcCeEEEECCchHHHH
Confidence 37787554 3578999999999987632211 10011234556888999998743 4578999999999999
Q ss_pred HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeec--CCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250 177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL--SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254 (514)
Q Consensus 177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
.+++.+..+.. .+++.||+.++.|++.......+ .|... ..++....+.
T Consensus 75 ~~~~~~~~~~~----~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~------------- 125 (382)
T 4hvk_A 75 LAIIGYAMRNA----RKGKHILVSAVEHMSVINPAKFLQKQGFEV------------EYIPVGKYGE------------- 125 (382)
T ss_dssp HHHHHHHHHHG----GGCCEEEEETTCCHHHHHHHHHHHHTTCEE------------EEECBCTTSC-------------
T ss_pred HHHHHhhhhhc----CCCCEEEECCCCcHHHHHHHHHHHhcCCEE------------EEeccCCCCC-------------
Confidence 99997643211 12467888888887654322111 12111 1111111110
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCc
Q 010250 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPD 334 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pD 334 (514)
.++++|++.+. +++++|+++++++++|.+.+ +++|.++|++||+ +|+||+|+ +|.. .+....++ +|
T Consensus 126 ~d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~-li~D~a~~-~~~~--~~~~~~~~--~d 191 (382)
T 4hvk_A 126 VDVSFIDQKLR----DDTILVSVQHANNEIGTIQP----VEEISEVLAGKAA-LHIDATAS-VGQI--EVDVEKIG--AD 191 (382)
T ss_dssp BCHHHHHHHCC----TTEEEEECCSBCTTTCBBCC----HHHHHHHHSSSSE-EEEECTTT-BTTB--CCCHHHHT--CS
T ss_pred cCHHHHHHHhc----cCceEEEEECCCCCceeeCC----HHHHHHHHHHcCE-EEEEhHHh-cCCC--CCCchhcC--CC
Confidence 11467777664 46789999999999998877 9999999999999 99999997 4322 12222223 57
Q ss_pred hhc--hhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHH
Q 010250 335 LVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPK 410 (514)
Q Consensus 335 iv~--~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~ 410 (514)
+++ ++|.++ + .++|+++++++. .+.+................++.++++..++++.+.+ +++.++.+++.++
T Consensus 192 ~~~~s~~K~~g-~-~g~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~ 267 (382)
T 4hvk_A 192 MLTISSNDIYG-P-KGVGALWIRKEA--KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDR 267 (382)
T ss_dssp EEEEESGGGTS-C-TTCEEEEEETTC--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeHHHhcC-C-CceEEEEEcCcc--CcCcccccCCCcCccccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 664 569543 2 458888887764 2221000000000111334567778877788876554 4567888888999
Q ss_pred HHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----------------
Q 010250 411 FQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------------- 472 (514)
Q Consensus 411 l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------------- 472 (514)
+.+.|+++....+.... ...+.++.+.+.... ...+.+.|.++||.+.++
T Consensus 268 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~ 335 (382)
T 4hvk_A 268 IIDNVLKIEESYLNGHPEKRLPNNVNVRFSYIE------------GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMAC 335 (382)
T ss_dssp HHHHHTTSTTEEECSCSSSBCTTEEEEEETTCC------------HHHHHHHHHHTTCBCBCC--------CCCHHHHHT
T ss_pred HHHHHhcCCCeEEeCCccccCCCEEEEEECCCC------------HHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHc
Confidence 99988765221111100 111235555553211 456788999999998864
Q ss_pred -------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 473 -------GDNIMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 473 -------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
.+.||+++...+|++|+++++++|+++++++.+
T Consensus 336 g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~ 375 (382)
T 4hvk_A 336 GLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp TCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 367999999889999999999999999877653
No 140
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.89 E-value=6.8e-23 Score=212.40 Aligned_cols=342 Identities=11% Similarity=0.029 Sum_probs=214.0
Q ss_pred CCEEEEccCCcccccCCCCC--HHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhcCcC-----CCC--eEEEe
Q 010250 99 GKKYLDSLAGLWCTALGGSE--PRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFTAS-----KMA--KVFFT 168 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~--p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~~~~-----~~~--~v~~~ 168 (514)
+..+|||..|.+..+.|+.+ |.|.+|+.++++... +.+. +.....++.+.+++++... ..+ +++++
T Consensus 48 ~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~----~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t 123 (420)
T 4f4e_A 48 RPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYL----PIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQA 123 (420)
T ss_dssp CSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCC----CTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEE
T ss_pred CCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCC----CCCCcHHHHHHHHHHhcCCCccccccCceEEEEC
Confidence 44689999997777788766 899999999987621 1111 1122345555555554211 245 89999
Q ss_pred CChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcccCCCCC
Q 010250 169 NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYWRYAHPG 246 (514)
Q Consensus 169 ~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 246 (514)
+||++|++.++++.... .++++|++.+++|++........+.... .+++ +..+.
T Consensus 124 ~G~t~al~~~~~~~~~~------~~gd~Vlv~~p~~~~~~~~~~~~g~~~~-------------~v~~~~~~~~~----- 179 (420)
T 4f4e_A 124 LGGTGALKIGADFLRTL------NPKAKVAISDPSWENHRALFDMAGFEVV-------------AYPYYDAKTNG----- 179 (420)
T ss_dssp EHHHHHHHHHHHHHHHH------CTTCCEEEEESCCHHHHHHHHHTTCCEE-------------EEECEETTTTE-----
T ss_pred CccHHHHHHHHHHHHHh------CCCCEEEEeCCCcHhHHHHHHHcCCeEE-------------EeeeeccccCc-----
Confidence 99999999998765322 3456899999999987544433322211 1111 00000
Q ss_pred CChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc--cc
Q 010250 247 ETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--MF 324 (514)
Q Consensus 247 ~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~--~~ 324 (514)
.++++|++.+.+. ++++.+++++..++++|.+. +.+.+++|.++|++||+++|+||+|.+|+..+. ..
T Consensus 180 --------~d~~~l~~~l~~~-~~~~~~v~i~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~ 249 (420)
T 4f4e_A 180 --------VNFDGMLAALNGY-EPGTIVVLHACCHNPTGVDL-NDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAA 249 (420)
T ss_dssp --------ECHHHHHHHHTTC-CTTCEEEEECSSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGH
T ss_pred --------cCHHHHHHHHHhC-CCCCEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhH
Confidence 0157788877643 24567888888888888654 668899999999999999999999999876542 11
Q ss_pred eec-ccCCCCchh---chhhhhcCCcccceeEEe---CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH--
Q 010250 325 GCD-KYSIKPDLV---SFAKALSSAYMPIGAILV---SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY-- 395 (514)
Q Consensus 325 ~~~-~~gv~pDiv---~~sK~l~gG~~pig~v~~---~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~-- 395 (514)
... ..+..++++ +|||.++..++++|++++ ++++++.+.... .......+.+.+++++.++.++++..
T Consensus 250 ~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~l 326 (420)
T 4f4e_A 250 AVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQL---KRVIRTNYSNPPTHGGAIVAAVLASPEL 326 (420)
T ss_dssp HHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHH---HHHHHTTTSSCCSHHHHHHHHHHHCHHH
T ss_pred HHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHH---HHHHhcccCCCCHHHHHHHHHHhcCHHH
Confidence 211 112223322 689998842389999864 566655432110 01111233445666766666656431
Q ss_pred ----h--hccHHHHHHHHHHHHHhhhhhccC-CCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcE
Q 010250 396 ----K--ERNIVEQVNKIAPKFQDGVKAFSD-SPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGML 468 (514)
Q Consensus 396 ----~--~~~~~~~~~~~~~~l~~~L~~l~~-~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~ 468 (514)
+ -+++.++++++++++.+.|+++.. ..+.......|.+.++.+. ...+...+.++||+
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~---------------~~~~~~~l~~~gI~ 391 (420)
T 4f4e_A 327 RASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLT---------------SAQVDRLREEFGIY 391 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCCC---------------HHHHHHHHHHHCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCCC---------------HHHHHHHHHhCCEE
Confidence 1 135677888889999999987621 1111111223444433331 23466777889999
Q ss_pred EEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 469 VRVSGDNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 469 ~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
+.+.+ |+++. .+++++|++++++|++++
T Consensus 392 v~~~~---Ris~~-~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 392 AVSTG---RICVA-ALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp CCTTS---EEEGG-GCCTTTHHHHHHHHHHHH
T ss_pred ecCCC---eEEEe-cCCHHHHHHHHHHHHHHh
Confidence 98764 88864 458888999999999876
No 141
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.89 E-value=1.9e-22 Score=203.25 Aligned_cols=318 Identities=13% Similarity=0.042 Sum_probs=210.8
Q ss_pred CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccE
Q 010250 117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 196 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ 196 (514)
.+|+|++|+.+++... .+ ....+...++.++++++++. +.+.+++++||++|++.+++.++ .++++
T Consensus 12 ~~~~v~~a~~~~~~~~-~~----~~~~~~~~~l~~~la~~~g~-~~~~i~~~~g~t~a~~~~~~~~~--------~~gd~ 77 (352)
T 1iug_A 12 LHPKALEALARPQLHH-RT----EAAREVFLKARGLLREAFRT-EGEVLILTGSGTLAMEALVKNLF--------APGER 77 (352)
T ss_dssp CCHHHHHHHHSCCCCT-TS----HHHHHHHHHHHHHHHHHHTC-SSEEEEEESCHHHHHHHHHHHHC--------CTTCE
T ss_pred CCHHHHHHhccCCCCc-cC----HHHHHHHHHHHHHHHHHhCC-CCceEEEcCchHHHHHHHHHhcc--------CCCCe
Confidence 5799999998876521 11 11234457899999998853 34689999999999999998873 23468
Q ss_pred EEEEecCCcccceeee-ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEE
Q 010250 197 FIARQKSYHGSTLIAA-SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAF 275 (514)
Q Consensus 197 ii~~~~~yHG~t~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aav 275 (514)
|++.+++|++...... ...|... ..++.+..+..+ .+++++ +++++|
T Consensus 78 vl~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~~d-------------~~~l~~-------~~~~~v 125 (352)
T 1iug_A 78 VLVPVYGKFSERFYEIALEAGLVV------------ERLDYPYGDTPR-------------PEDVAK-------EGYAGL 125 (352)
T ss_dssp EEEEECSHHHHHHHHHHHHTTCEE------------EEEECCTTCCCC-------------TTTSCC-------SSCSEE
T ss_pred EEEEeCCchhHHHHHHHHHcCCce------------EEEeCCCCCCCC-------------HHHHhc-------cCCcEE
Confidence 9999999998641111 1112111 111111111000 123322 245678
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHhc--CCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCccccee
Q 010250 276 IAEPVIGAGGVIPPPATYFEKVQAVVKKY--DILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGA 351 (514)
Q Consensus 276 ivEpv~~~~G~~~p~~~~L~~l~~l~~~~--gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig~ 351 (514)
+++.+++.+|.+.+ +++|.++|++| |+++|+||+|+ +|... +....+ .+|+++ ++|++.|+ .++|+
T Consensus 126 ~~~~~~nptG~~~~----l~~i~~l~~~~~~~~~li~D~a~~-~~~~~--~~~~~~--~~d~~~~s~~K~~~~~-~g~G~ 195 (352)
T 1iug_A 126 LLVHSETSTGALAD----LPALARAFKEKNPEGLVGADMVTS-LLVGE--VALEAM--GVDAAASGSQKGLMCP-PGLGF 195 (352)
T ss_dssp EEESEETTTTEECC----HHHHHHHHHHHCTTCEEEEECTTT-BTTBC--CCSGGG--TCSEEEEESSSTTCCC-SCEEE
T ss_pred EEEEecCCcceecC----HHHHHHHHHhhCCCCEEEEECCcc-ccCcc--eecccc--CeeEEEecCcccccCC-CceeE
Confidence 88888999998877 99999999999 99999999996 54431 222222 367775 56988875 46899
Q ss_pred EEeCHHHHHHhhhccCCC------Ccc-cccCCCCCcHHHHHHHHHHHHHHhhc--cHHHHHHHHHHHHHhhhhhccCCC
Q 010250 352 ILVSPEVSEVIHSQSNTL------GSF-SHGFTYSGHPVSCAVAIEALKIYKER--NIVEQVNKIAPKFQDGVKAFSDSP 422 (514)
Q Consensus 352 v~~~~~i~~~l~~~~~~~------~~~-~~~~t~~~~pl~~aaa~aal~~~~~~--~~~~~~~~~~~~l~~~L~~l~~~~ 422 (514)
+++++++++.+....... ... ....+++.++.+++++.++++.+++. ++.++++++++++.+.|+++ +..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 274 (352)
T 1iug_A 196 VALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEG-GLR 274 (352)
T ss_dssp EEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred EEECHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCc
Confidence 999998776521100000 000 01123456778888888888877653 56778888899999999875 322
Q ss_pred ceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCCCHHHHHHHHHHHH
Q 010250 423 IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSPEEVDELISKYG 497 (514)
Q Consensus 423 ~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~t~e~id~~~~~l~ 497 (514)
+.... ..+.++.+.+.+.. ....+.+.|.++||.+.++ .+.+||+++...|++|+++++++|+
T Consensus 275 ~~~~~-~~~~~~~~~~~~~~-----------~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 342 (352)
T 1iug_A 275 PVPKR-FSPAVAAFYLPEGV-----------PYARVKEAFAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFR 342 (352)
T ss_dssp ESCSS-BCTTCEEEECCTTC-----------CHHHHHHHHHTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHH
T ss_pred ccccc-cCCeEEEEEcCCCC-----------CHHHHHHHHHHCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHH
Confidence 21111 24667777764211 1456888999999999875 3679999988889999999999999
Q ss_pred HHHHHH
Q 010250 498 KALKAT 503 (514)
Q Consensus 498 ~~l~~~ 503 (514)
++++++
T Consensus 343 ~~~~~~ 348 (352)
T 1iug_A 343 EVLEEI 348 (352)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988654
No 142
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.89 E-value=2.9e-22 Score=206.77 Aligned_cols=331 Identities=15% Similarity=0.098 Sum_probs=214.9
Q ss_pred cCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEE-EeCChhHHHHHHHHHHHHHHhhcCC
Q 010250 113 ALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVF-FTNSGSEANDTQVKLVWYYNNALGR 191 (514)
Q Consensus 113 ~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~-~~~sGseA~~~Alk~a~~~~~~~~~ 191 (514)
+|+++++.+.+++.+++.+....+.. ....+...+++++++++++. ..+.++ +++||++|++.+++.+.
T Consensus 14 ~~~p~p~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~l~~~la~~~g~-~~~~~~~~~~s~t~al~~~~~~l~-------- 83 (416)
T 3isl_A 14 IMTPGPVEVDPRVLRVMSTPVVGQFD-PAFTGIMNETMEMLRELFQT-KNRWAYPIDGTSRAGIEAVLASVI-------- 83 (416)
T ss_dssp ECSSSSCCCCHHHHHHTTSCCCCTTS-HHHHHHHHHHHHHHHHHTTC-CCSEEEEEESCHHHHHHHHHHHHC--------
T ss_pred eecCCCcCcCHHHHHHhcccCCCCcc-HHHHHHHHHHHHHHHHHhCC-CCCcEEEecCcHHHHHHHHHHHhc--------
Confidence 46666666666666666543221110 11234567889999998853 345554 89999999999998763
Q ss_pred CCccEEEEEecCCccccee-eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCC
Q 010250 192 PNKKKFIARQKSYHGSTLI-AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPE 270 (514)
Q Consensus 192 ~~~~~ii~~~~~yHG~t~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~ 270 (514)
.++++||+.+++||+.... .....|... ..++.+..+. .++++|++.+.+.
T Consensus 84 ~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~-------------~d~~~l~~~i~~~--- 135 (416)
T 3isl_A 84 EPEDDVLIPIYGRFGYLLTEIAERYGANV------------HMLECEWGTV-------------FDPEDIIREIKKV--- 135 (416)
T ss_dssp CTTCEEEEEESSHHHHHHHHHHHHTTCEE------------EEEECCTTCC-------------CCHHHHHHHHHHH---
T ss_pred CCCCEEEEecCCcccHHHHHHHHhcCCee------------EEEecCCCCC-------------CCHHHHHHHHhhC---
Confidence 3467899999999983321 122222211 1111111100 1257888887642
Q ss_pred cEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCccc
Q 010250 271 TIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMP 348 (514)
Q Consensus 271 ~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~p 348 (514)
++++|+++.+++.+|.+.+ +++|.++|++||+++|+||+|+ +|.. ...... ..+|+++ ++|++.|+ .+
T Consensus 136 ~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~~~~--~~~~~~--~~~d~~~~s~~K~l~g~-~g 205 (416)
T 3isl_A 136 KPKIVAMVHGETSTGRIHP----LKAIGEACRTEDALFIVDAVAT-IGGC--EVKVDE--WKIDAAIGGTQKCLSVP-SG 205 (416)
T ss_dssp CCSEEEEESEETTTTEECC----CHHHHHHHHHTTCEEEEECTTT-TTTS--CCCTTT--TTCSEEECCSSSTTCCC-SS
T ss_pred CCcEEEEEccCCCCceecC----HHHHHHHHHHcCCEEEEECCcc-ccCC--Ccchhh--cCCCEEEecCccccCCC-CC
Confidence 3578888899999998887 8999999999999999999997 4322 112222 2367765 45988876 68
Q ss_pred ceeEEeCHHHHHHhhhcc------------------CCCCc------------ccccC-CCCCcHHHHHHHHHHHHHHhh
Q 010250 349 IGAILVSPEVSEVIHSQS------------------NTLGS------------FSHGF-TYSGHPVSCAVAIEALKIYKE 397 (514)
Q Consensus 349 ig~v~~~~~i~~~l~~~~------------------~~~~~------------~~~~~-t~~~~pl~~aaa~aal~~~~~ 397 (514)
+|++++++++++.+.... ..... ..... ..+.+..+++++.++++.+.+
T Consensus 206 ~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 285 (416)
T 3isl_A 206 MAPITYNERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLE 285 (416)
T ss_dssp EEEEEECHHHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEECHHHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 999999999988876321 00000 01111 224467777777788887665
Q ss_pred c---cHHHHHHHHHHHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee
Q 010250 398 R---NIVEQVNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS 472 (514)
Q Consensus 398 ~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~ 472 (514)
. ++.++++++++++.+.|+++ ...+.... ...+.++.+.+.+.. ....+.+.|.++ ||.+.++
T Consensus 286 ~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~L~~~~gi~v~~g 353 (416)
T 3isl_A 286 EGLETRFERHRHHEAALAAGIKAM-GLRLFGDDSCKMPVVTCVEIPGGI-----------DGESVRDMLLAQFGIEIASS 353 (416)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCTTEEEEECCTTC-----------CHHHHHHHHHHHHCEECBCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCccccCCcEEEEeCCCCC-----------CHHHHHHHHHHhCCEEEecC
Confidence 3 57888899999999999875 33222111 112456667664321 145688888887 9999853
Q ss_pred -----CCEEEEeCCCCCCHHH-HHHHHHHHHHHHHHH
Q 010250 473 -----GDNIMMSPPFIMSPEE-VDELISKYGKALKAT 503 (514)
Q Consensus 473 -----g~~iRi~p~~~~t~e~-id~~~~~l~~~l~~~ 503 (514)
++.+|++++...+++| |++++++|+++++++
T Consensus 354 ~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~ 390 (416)
T 3isl_A 354 FGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRH 390 (416)
T ss_dssp CSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHc
Confidence 3579999866666666 999999999998765
No 143
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.89 E-value=8.4e-22 Score=197.49 Aligned_cols=314 Identities=14% Similarity=0.139 Sum_probs=211.6
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT 177 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~ 177 (514)
+.+++|||.++. +++| .+|.+.+++.++++....| +.....++.+.++++++ ...+++++++|+++++..
T Consensus 14 ~~~~~i~l~~n~--~~~~-~~~~v~~a~~~~~~~~~~y------~~~~~~~lr~~la~~~~-~~~~~i~~t~G~~~~l~~ 83 (337)
T 3p1t_A 14 AAAQAVCLAFNE--NPEA-VEPRVQAAIAAAAARINRY------PFDAEPRVMRKLAEHFS-CPEDNLMLVRGIDECFDR 83 (337)
T ss_dssp CCCCCEECSSCC--CCSC-CCHHHHHHHHHHGGGTTSC------CTTHHHHHHHHHHHHHT-SCGGGEEEESHHHHHHHH
T ss_pred CCCCceEeeCCC--CCCC-CCHHHHHHHHHhhhhhccC------CCCchHHHHHHHHHHhC-cCHHHEEEeCCHHHHHHH
Confidence 456799998875 5677 6899999999988764332 34566889999999984 345789999999999999
Q ss_pred HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
+++.+ ++++|++.+++|++....... .|... ..++....|. .+.
T Consensus 84 ~~~~~----------~gd~vl~~~p~~~~~~~~~~~-~g~~~------------~~v~~~~~~~-------------~d~ 127 (337)
T 3p1t_A 84 ISAEF----------SSMRFVTAWPGFDGYRARIAV-SGLRH------------FEIGLTDDLL-------------LDP 127 (337)
T ss_dssp HHHHS----------TTSEEEEESSSCSHHHHHHTT-SCCEE------------EEECBCTTSS-------------BCH
T ss_pred HHHhc----------CCCeEEEeCCCcHHHHHHHHH-cCCEE------------EEecCCCCCC-------------CCH
Confidence 98764 246899999999886533222 12111 1111111111 013
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS 337 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~ 337 (514)
+++++. . ++.++++...++++|.+.+ ++++.++|+++++ +|+||+|.+|+..+... ....+....+.+
T Consensus 128 ~~l~~~-----~-~~~~v~i~~p~nptG~~~~----~~~l~~l~~~~~~-~ivDea~~~~~~~~~~~-~~~~~~~i~~~S 195 (337)
T 3p1t_A 128 NDLAQV-----S-RDDCVVLANPSNPTGQALS----AGELDQLRQRAGK-LLIDETYVDYSSFRARG-LAYGENELVFRS 195 (337)
T ss_dssp HHHTTC-----C-TTEEEEEESSCTTTCCCCC----HHHHHHHHHHCSE-EEEECTTGGGSSCSSSC-CCCBTTEEEEEE
T ss_pred HHHHhh-----c-CCCEEEEeCCCCCCCCCCC----HHHHHHHHHhCCc-EEEECCChhhccccccc-cccCCCEEEEee
Confidence 444432 2 3356666666778888887 7899999999997 56699999876544321 111111112336
Q ss_pred hhhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhhh
Q 010250 338 FAKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDGV 415 (514)
Q Consensus 338 ~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~L 415 (514)
+||.++ .| +++|++++++++++.+... ..+++.++++++++.++|+... -++..+++.++.+++.+.|
T Consensus 196 ~sK~~g~~G-~r~G~~~~~~~~~~~l~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L 265 (337)
T 3p1t_A 196 FSKSYGLAG-LRLGALFGPSELIAAMKRK---------QWFCNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADAL 265 (337)
T ss_dssp SSSTTCCTT-TCCEEEECCHHHHHHHHTT---------SCTTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhccCcc-hheEEEEeCHHHHHHHHhh---------cCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 889997 45 8999999999999988731 2356678888888888776432 1344566677778888888
Q ss_pred hhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-----CEEEEeCCCCCCHHHHH
Q 010250 416 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----DNIMMSPPFIMSPEEVD 490 (514)
Q Consensus 416 ~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-----~~iRi~p~~~~t~e~id 490 (514)
+++ .... ....|.++.+.+.+ ...+.+.|.++||.+.++. +.+|++. .++++++
T Consensus 266 ~~~-g~~~---~~~~~~~~~~~~~~--------------~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~---~~~~~~~ 324 (337)
T 3p1t_A 266 RGL-GYRV---ASSEANFVLVENAA--------------GERTLRFLRERGIQVKDAGQFGLHHHIRISI---GREEDND 324 (337)
T ss_dssp HHT-TCCB---CCCSSSEEEEECTT--------------THHHHHHHHHTTEECEEGGGGTCCSEEEEEC---CCHHHHH
T ss_pred HHC-cCEE---CCCCCeEEEEEcCC--------------HHHHHHHHHHCCeEEEECccCCCCCeEEEec---CCHHHHH
Confidence 775 2222 23456666665432 1246678889999998753 6799994 3899999
Q ss_pred HHHHHHHHHH
Q 010250 491 ELISKYGKAL 500 (514)
Q Consensus 491 ~~~~~l~~~l 500 (514)
+++++|++.+
T Consensus 325 ~l~~al~~~~ 334 (337)
T 3p1t_A 325 RLLAALAEYS 334 (337)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999988765
No 144
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.89 E-value=2.9e-22 Score=206.06 Aligned_cols=331 Identities=14% Similarity=0.104 Sum_probs=209.7
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHh-cCCccc---cccccCCchHHHHH----HHHHHhcCcCCCCeEEEeCCh
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLN-TLPFYH---SFWNRTTKPSLDLA----KELLEMFTASKMAKVFFTNSG 171 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~-~~~~~~---~~~~~~~~~~~ela----~~L~~~~~~~~~~~v~~~~sG 171 (514)
+.++|+.++ +++ +|+|++|+.+++. .....+ .++.+ .....+++ ++++++++. + ...++++||
T Consensus 24 ~~~~~~~~~---~~~---~~~v~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~r~~la~~~g~-~-~~~i~~~sG 94 (405)
T 2vi8_A 24 AKIELIASE---NFV---SRAVMEAQGSVLTNKYAEGYPGRRYYGG-CEYVDIVEELARERAKQLFGA-E-HANVQPHSG 94 (405)
T ss_dssp HSEECCTTC---CCC---CHHHHHHHTSGGGGCCCCEETTEESSSC-CHHHHHHHHHHHHHHHHHHTC-S-EEECCCSSH
T ss_pred cceeeccCc---ccC---CHHHHHHHHHHhhcccccCCCCcccccc-chHHHHHHHHHHHHHHHHhCC-C-ceEEEecCc
Confidence 457887655 444 8999999999985 432211 11111 12234444 588888742 2 234556888
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccce-ee-eecCCCccccCCCCCCCCcccccCC-CCcccCCCCCCC
Q 010250 172 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTL-IA-ASLSGLPALHQKFDLPAPFVLHTDC-PHYWRYAHPGET 248 (514)
Q Consensus 172 seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~-~~-~~~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 248 (514)
++|++.+++.++ .++++|++.+++|++... .. ....|.. . .+..++. +..+.
T Consensus 95 t~a~~~a~~~~~--------~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~-----~-----~~~~~~~~~~~~~------- 149 (405)
T 2vi8_A 95 AQANMAVYFTVL--------EHGDTVLGMNLSHGGHLTHGSPVNFSGVQ-----Y-----NFVAYGVDPETHV------- 149 (405)
T ss_dssp HHHHHHHHHHHC--------CTTCEEEEECGGGTCCTTTTCTTSHHHHH-----S-----EEEEECBCTTTCS-------
T ss_pred HHHHHHHHHHhc--------CCCCEEEEecccccchhcccchhhhccce-----e-----EEEecccccccCC-------
Confidence 999999999873 335678888877654421 11 1111110 0 0000110 00111
Q ss_pred hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecc
Q 010250 249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDK 328 (514)
Q Consensus 249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~ 328 (514)
.++++|++.+.+. ++++|++.|.+ .|... .+++|+++|++||+++|+||+|+ +|+.+... ..
T Consensus 150 ------~d~~~l~~~i~~~---~~~~v~~~~~~--~~~~~----~l~~i~~l~~~~~~~li~Dea~~-~g~~~~~~--~~ 211 (405)
T 2vi8_A 150 ------IDYDDVREKARLH---RPKLIVAAAAA--YPRII----DFAKFREIADEVGAYLMVDMAHI-AGLVAAGL--HP 211 (405)
T ss_dssp ------BCHHHHHHHHHHH---CCSEEEECCSS--CCSCC----CHHHHHHHHHHHTCEEEEECTTT-HHHHHTTS--SC
T ss_pred ------cCHHHHHHHHHhc---CCeEEEEeCCC--CCccC----CHHHHHHHHHHcCCEEEEEcccc-ccccccCc--CC
Confidence 1257788877642 24566665432 23222 28999999999999999999998 66554321 11
Q ss_pred cCC-CCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCC-cHHHHHHHHHHHHHHhh---ccHH
Q 010250 329 YSI-KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSG-HPVSCAVAIEALKIYKE---RNIV 401 (514)
Q Consensus 329 ~gv-~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~-~pl~~aaa~aal~~~~~---~~~~ 401 (514)
..+ .+|++ +++|+++|+ .. |++++++++++.+... ...+++++ ++..++++.++++.+.+ +++.
T Consensus 212 ~~~~~~di~~~s~sK~~~g~-~g-G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~ 282 (405)
T 2vi8_A 212 NPVPYAHFVTTTTHKTLRGP-RG-GMILCQEQFAKQIDKA-------IFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYA 282 (405)
T ss_dssp CSTTTCSEEEEESSSTTCCC-SC-EEEEECHHHHHHHHHH-------HTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred CccccCCEEEEeccccCCCC-CC-eEEEEcHHHHHHHHhh-------hcccccCCCCHHHHHHHHHHHHHHHhhhHHHHH
Confidence 222 47877 688999864 33 9999999998887642 11223333 67777777788887654 4678
Q ss_pred HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---------
Q 010250 402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--------- 472 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--------- 472 (514)
++++++++++.+.|+++ +..+... .+.+.++.+.+..... ....+.+.|.++||.+.++
T Consensus 283 ~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~gi~v~~g~~~~~~~~~ 350 (405)
T 2vi8_A 283 KRVVDNAKRLASALQNE-GFTLVSG-GTDNHLLLVDLRPQQL----------TGKTAEKVLDEVGITVNKNTIPYDPESP 350 (405)
T ss_dssp HHHHHHHHHHHHHHHHT-TCEEGGG-SCSSSEEEEECGGGTC----------CHHHHHHHHHHHTEECEEECCTTCSSCT
T ss_pred HHHHHHHHHHHHHHHhC-CCeEecC-CCCceEEEEEccCCCC----------CHHHHHHHHHHcCceeccCcCccccCCC
Confidence 88999999999999876 3322211 1346777888753210 1445778888999999874
Q ss_pred --CCEEEEeCCC----CCCHHHHHHHHHHHHHHHHHH
Q 010250 473 --GDNIMMSPPF----IMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 473 --g~~iRi~p~~----~~t~e~id~~~~~l~~~l~~~ 503 (514)
.+.+|++++. .++++|+++++++|+++++++
T Consensus 351 ~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~ 387 (405)
T 2vi8_A 351 FVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNV 387 (405)
T ss_dssp TTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCT
T ss_pred CCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhcc
Confidence 2469999886 688999999999999998655
No 145
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.89 E-value=5.2e-22 Score=199.32 Aligned_cols=311 Identities=15% Similarity=0.149 Sum_probs=203.0
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc--CCCCeEEEeCChhHHHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA--SKMAKVFFTNSGSEANDT 177 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~--~~~~~v~~~~sGseA~~~ 177 (514)
.+++||.++.. .++ .+|++.+|+.+++.+... + ..+.....++.+.|++++.. .+.+++++++||++|++.
T Consensus 19 ~~~i~l~~~~~--~~~-~~~~v~~a~~~~~~~~~~-~---~y~~~~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~ 91 (335)
T 1uu1_A 19 RDKTYLALNEN--PFP-FPEDLVDEVFRRLNSDAL-R---IYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYV 91 (335)
T ss_dssp CCSEEESSCCC--SSC-CCHHHHHHHHHTCCGGGG-G---SCCCSSCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHH
T ss_pred CcceECCCCCC--CCC-CCHHHHHHHHHHhhhhhh-h---cCCCCchHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHH
Confidence 45788887743 465 689999999998743111 1 11222357888999988741 245789999999999999
Q ss_pred HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257 (514)
Q Consensus 178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
+++.+ +++|++. ++||+........ |.... .++....|..+ +
T Consensus 92 ~~~~~-----------gd~Vl~~-p~y~~~~~~~~~~-g~~~~------------~v~~~~~~~~d-------------~ 133 (335)
T 1uu1_A 92 MMLMF-----------DRSVFFP-PTYSCYRIFAKAV-GAKFL------------EVPLTKDLRIP-------------E 133 (335)
T ss_dssp HHHHS-----------SEEEECS-SSCHHHHHHHHHH-TCEEE------------ECCCCTTSCCC-------------C
T ss_pred HHHHh-----------CCcEEEC-CCcHHHHHHHHHc-CCeEE------------EeccCCCCCCC-------------H
Confidence 99764 3578888 9999875433222 21111 11111111100 1
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-ecccCCCCchh
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYSIKPDLV 336 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~~gv~pDiv 336 (514)
++| ++..+.++++| ++.+|.+.+ .+++.++++.+| ++|+||+|++|+. +.... .+.++....+.
T Consensus 134 ~~l--------~~~~~v~l~~p-~nptG~~~~----~~~l~~l~~~~~-~li~De~~~~~~~-~~~~~~~~~~~~~i~~~ 198 (335)
T 1uu1_A 134 VNV--------GEGDVVFIPNP-NNPTGHVFE----REEIERILKTGA-FVALDEAYYEFHG-ESYVDFLKKYENLAVIR 198 (335)
T ss_dssp CCC--------CTTEEEEEESS-CTTTCCCCC----HHHHHHHHHTTC-EEEEECTTHHHHC-CCCGGGGGTCSSEEEEE
T ss_pred HHc--------CCCCEEEEeCC-CCCCCCCCC----HHHHHHHHHhCC-EEEEECcchhhcc-hhHHHHhhhCCCEEEEe
Confidence 112 12334444677 667777665 445555555558 9999999997743 21111 12222223345
Q ss_pred chhhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhh
Q 010250 337 SFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDG 414 (514)
Q Consensus 337 ~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~ 414 (514)
++||.++ .| +++|++++++++++.+... ..+++.|+++++++.++|+..+ -++..++++++++++.+.
T Consensus 199 s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 268 (335)
T 1uu1_A 199 TFSKAFSLAA-QRVGYVVASEKFIDAYNRV---------RLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSA 268 (335)
T ss_dssp ESTTTTTCGG-GCCEEEEECHHHHHHHHHH---------SCTTCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhcCCcc-cCeEEEEeCHHHHHHHHHh---------cCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 7899987 45 8999999999999888742 1346788999999999887532 235677888888999998
Q ss_pred hhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHH
Q 010250 415 VKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELIS 494 (514)
Q Consensus 415 L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~ 494 (514)
|+++ .... ....|.++++.+.. . ....+.+.|.++||++.+..+.+|+++ .+++|++++++
T Consensus 269 L~~~-g~~~---~~~~~~~~~~~~~~-~-----------~~~~~~~~l~~~gi~v~~~~~~iRis~---~~~~~i~~~~~ 329 (335)
T 1uu1_A 269 LREM-GYRI---TDSRGNFVFVFMEK-E-----------EKERLLEHLRTKNVAVRSFREGVRITI---GKREENDMILR 329 (335)
T ss_dssp HHHH-TCCB---CCCCSSEEEEECCT-H-----------HHHHHHHHHHHHTEEEEEETTEEEEEC---CCHHHHHHHHH
T ss_pred HHHC-CcEE---cCCCCeEEEEECCC-C-----------CHHHHHHHHHHCCEEEEECCCeEEEEe---CCHHHHHHHHH
Confidence 8876 3222 23346677776642 0 144678889999999999778899995 35788999999
Q ss_pred HHHHH
Q 010250 495 KYGKA 499 (514)
Q Consensus 495 ~l~~~ 499 (514)
+|+++
T Consensus 330 ~l~~~ 334 (335)
T 1uu1_A 330 ELEVF 334 (335)
T ss_dssp HHHCC
T ss_pred HHHhh
Confidence 88753
No 146
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.89 E-value=3.7e-22 Score=204.71 Aligned_cols=324 Identities=15% Similarity=0.132 Sum_probs=213.0
Q ss_pred CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCC-eEEEeCChhHHHHHHHHHHHHHHhhcCCCCcc
Q 010250 117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMA-KVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 195 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~-~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~ 195 (514)
-+|++++|+.+++.. .++. .+.....++.+.++++++. +.+ ++++++||++|++.+++.+. .+++
T Consensus 29 ~~~~v~~a~~~~~~~--~~~~---~~~~~~~~l~~~la~~~~~-~~~~~v~~~~g~t~al~~~~~~~~--------~~gd 94 (396)
T 2ch1_A 29 CSKRVLTAMTNTVLS--NFHA---ELFRTMDEVKDGLRYIFQT-ENRATMCVSGSAHAGMEAMLSNLL--------EEGD 94 (396)
T ss_dssp CCHHHHHHTTSCCCC--TTCH---HHHHHHHHHHHHHHHHHTC-CCSCEEEESSCHHHHHHHHHHHHC--------CTTC
T ss_pred CCHHHHHHhcccccc--CCCh---hHHHHHHHHHHHHHHHhCC-CCCcEEEECCcHHHHHHHHHHHhc--------CCCC
Confidence 468888887665432 1111 1123467899999999853 445 79999999999999998873 3356
Q ss_pred EEEEEecCCcccce-eeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEE
Q 010250 196 KFIARQKSYHGSTL-IAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAA 274 (514)
Q Consensus 196 ~ii~~~~~yHG~t~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aa 274 (514)
+|++.+++|++... ......|... ..++.+..+. .++++|++.+.+. ++++
T Consensus 95 ~vl~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~-------------~d~~~l~~~l~~~---~~~~ 146 (396)
T 2ch1_A 95 RVLIAVNGIWAERAVEMSERYGADV------------RTIEGPPDRP-------------FSLETLARAIELH---QPKC 146 (396)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCEE------------EEEECCTTSC-------------CCHHHHHHHHHHH---CCSE
T ss_pred eEEEEcCCcccHHHHHHHHHcCCce------------EEecCCCCCC-------------CCHHHHHHHHHhC---CCCE
Confidence 89999999998631 1112222211 1111111111 1157788877642 3567
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeE
Q 010250 275 FIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAI 352 (514)
Q Consensus 275 vivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v 352 (514)
|+++++++.+|.+.+ +++|.++|++||+++|+||+|+ +|.. ..... ...+|++++| |.++++ .++|++
T Consensus 147 v~~~~~~nptG~~~~----~~~i~~l~~~~~~~li~Dea~~-~g~~--~~~~~--~~~~d~~~~s~~K~~~~~-~g~g~~ 216 (396)
T 2ch1_A 147 LFLTHGDSSSGLLQP----LEGVGQICHQHDCLLIVDAVAS-LCGV--PFYMD--KWEIDAVYTGAQKVLGAP-PGITPI 216 (396)
T ss_dssp EEEESEETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-BTTB--CCCTT--TTTCCEEECCCC-CCCCC-SSCEEE
T ss_pred EEEECCCCCCceecC----HHHHHHHHHHcCCEEEEEcccc-ccCC--ccchh--hcCcCEEEEcCCccccCC-CCeEEE
Confidence 788888888898877 8999999999999999999997 6543 22222 2346877655 998876 578999
Q ss_pred EeCHHHHHHhhhccCCCCccc---------------cc-CCCCCcHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHh
Q 010250 353 LVSPEVSEVIHSQSNTLGSFS---------------HG-FTYSGHPVSCAVAIEALKIYKER---NIVEQVNKIAPKFQD 413 (514)
Q Consensus 353 ~~~~~i~~~l~~~~~~~~~~~---------------~~-~t~~~~pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~ 413 (514)
++++++++.+.....+.+.+. .. ..++.+..+++++.++|+.+.++ ++.++++++++++.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~ 296 (396)
T 2ch1_A 217 SISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYE 296 (396)
T ss_dssp EECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred EECHHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 999998887753211111101 01 12345667788888888876433 467888889999999
Q ss_pred hhhhccCCCceeEEE--eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee-----CCEEEEeC-CCCC
Q 010250 414 GVKAFSDSPIIGEIR--GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS-----GDNIMMSP-PFIM 484 (514)
Q Consensus 414 ~L~~l~~~~~~~~v~--g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~-----g~~iRi~p-~~~~ 484 (514)
.|+++ +..+..... ..+.++.+.+.... ....+.+.|.++ ||.+.++ .+.+|+++ ++.+
T Consensus 297 ~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~ 364 (396)
T 2ch1_A 297 GLGKM-GLDIFVKDPRHRLPTVTGIMIPKGV-----------DWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECS 364 (396)
T ss_dssp HHHHH-TCCBSSCSGGGBCTTEEEEECCTTC-----------CHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGC
T ss_pred HHHHC-CCeeccCCccccCCceEEEEcCCCC-----------CHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcC
Confidence 99876 333322110 12345666663211 145677888875 9999863 36799998 5678
Q ss_pred CHHHHHHHHHHHHHHHHHHH
Q 010250 485 SPEEVDELISKYGKALKATE 504 (514)
Q Consensus 485 t~e~id~~~~~l~~~l~~~~ 504 (514)
+++|+++++++|+++++++.
T Consensus 365 ~~e~i~~~~~~l~~~l~~~~ 384 (396)
T 2ch1_A 365 TVQKIQFYLYGFKESLKATH 384 (396)
T ss_dssp SHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999987654
No 147
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.89 E-value=1.1e-21 Score=201.12 Aligned_cols=281 Identities=14% Similarity=0.143 Sum_probs=188.9
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP 218 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~ 218 (514)
+.+...+++++|+++++. ++.++++||++|++.+++.+. .++++|++.++.||+..... ....+..
T Consensus 50 ~~~~~~~l~~~la~~~~~---~~~i~~~sGt~a~~~~~~~~~--------~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~ 118 (386)
T 1cs1_A 50 GNPTRDVVQRALAELEGG---AGAVLTNTGMSAIHLVTTVFL--------KPGDLLVAPHDCYGGSYRLFDSLAKRGCYR 118 (386)
T ss_dssp CCHHHHHHHHHHHHHHTC---SEEEEESSHHHHHHHHHHHHC--------CTTCEEEEETTCCHHHHHHHHHHHTTTSCE
T ss_pred CCccHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHHh--------CCCCEEEEecCCcHhHHHHHHHHHHhcCCE
Confidence 445667889999998843 256666888999999998763 34578999999998743211 0111110
Q ss_pred cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250 219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 298 (514)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~ 298 (514)
+..++.. +.+++++.+. +++++|+++++++++|.+.+ +++|+
T Consensus 119 ------------~~~~~~~------------------d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----l~~i~ 160 (386)
T 1cs1_A 119 ------------VLFVDQG------------------DEQALRAALA----EKPKLVLVESPSNPLLRVVD----IAKIC 160 (386)
T ss_dssp ------------EEEECTT------------------CHHHHHHHHH----TCCSEEEEECSCTTTCCCCC----HHHHH
T ss_pred ------------EEEeCCC------------------CHHHHHHhhc----cCCcEEEEeCCCCCCCcccC----HHHHH
Confidence 1111110 2577888775 35678999999999999886 99999
Q ss_pred HHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccc-eeEEeCH-HHHHHhhhccCCCCcccc
Q 010250 299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPI-GAILVSP-EVSEVIHSQSNTLGSFSH 374 (514)
Q Consensus 299 ~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pi-g~v~~~~-~i~~~l~~~~~~~~~~~~ 374 (514)
++|++||+++|+||+|+++... ... .+ .+|++ +++|++++++.++ |++++++ ++++.+.. ..+
T Consensus 161 ~l~~~~~~~li~De~~~~~~~~-~~~---~~--~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~-------~~~ 227 (386)
T 1cs1_A 161 HLAREVGAVSVVDNTFLSPALQ-NPL---AL--GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAW-------WAN 227 (386)
T ss_dssp HHHHHTTCEEEEECTTTCTTTC-CGG---GG--TCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHH-------HHH
T ss_pred HHHHHcCCEEEEECCCcccccC-Ccc---cc--CceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHH-------HHH
Confidence 9999999999999999976432 111 22 35665 6899998875666 8888886 78888763 233
Q ss_pred cCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-----CCcee----------EEEeeeeeEEEEEc
Q 010250 375 GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----------EIRGTGLILGTEFA 439 (514)
Q Consensus 375 ~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----------~v~g~g~~~~i~~~ 439 (514)
+.+...++++++++.++++.+. ...++..++.+.+.+.|+++.. .+.+. ..++.|.++.+.+.
T Consensus 228 ~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (386)
T 1cs1_A 228 NIGVTGGAFDSYLLLRGLRTLV--PRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELD 305 (386)
T ss_dssp HHTCBCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES
T ss_pred hcCCCCCHHHHHHHHhcccHHH--HHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEEC
Confidence 4456678998888877776543 2344455555566555554311 11110 12456888888875
Q ss_pred cCCCCCCCCCCccchHHHHHHHHHHCCcEEEe---e----------------------------CCEEEEeCCCCCCHHH
Q 010250 440 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV---S----------------------------GDNIMMSPPFIMSPEE 488 (514)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~---~----------------------------g~~iRi~p~~~~t~e~ 488 (514)
+. ...+...|.++||+++. + .+.||+++++..++++
T Consensus 306 ~~-------------~~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~ 372 (386)
T 1cs1_A 306 GD-------------EQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDL 372 (386)
T ss_dssp SC-------------HHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHH
T ss_pred CC-------------HHHHHHHHHhCCcceEcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHH
Confidence 31 23466778889998873 1 2579999999878888
Q ss_pred HHHHHHHHHHH
Q 010250 489 VDELISKYGKA 499 (514)
Q Consensus 489 id~~~~~l~~~ 499 (514)
|+.+.++|+++
T Consensus 373 i~~l~~al~~~ 383 (386)
T 1cs1_A 373 IADLENGFRAA 383 (386)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 77777776654
No 148
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.89 E-value=3.9e-22 Score=207.23 Aligned_cols=361 Identities=15% Similarity=0.111 Sum_probs=206.6
Q ss_pred CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccc-cccc---cCCchHHHHHHHHHHhcCcCCCCeEEEeCChh
Q 010250 97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYH-SFWN---RTTKPSLDLAKELLEMFTASKMAKVFFTNSGS 172 (514)
Q Consensus 97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~-~~~~---~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGs 172 (514)
.+|..|||+.++. +.+|+|++|+.+++.....+. ..+. ...+...++.++|+++++. +.++++|++||+
T Consensus 16 ~~~~~~Ld~~~~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~-~~~~v~~~~g~t 88 (432)
T 3a9z_A 16 PNRKVYMDYNATT------PLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGG-KPQDIIFTSGGT 88 (432)
T ss_dssp --CCEECBTTTCC------CCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTC-CGGGEEEESCHH
T ss_pred CCCcEEeeCCccC------CCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCC-CcCeEEEeCChH
Confidence 3678899986552 679999999999987632111 1110 1123446889999998853 456899999999
Q ss_pred HHHHHHHHHHHH-HHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCC----CCCcccccCCCC-cccCCCCC
Q 010250 173 EANDTQVKLVWY-YNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDL----PAPFVLHTDCPH-YWRYAHPG 246 (514)
Q Consensus 173 eA~~~Alk~a~~-~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~ 246 (514)
+|++.+++.+.. +......+ +++|++.+++||++.....+....+.....+.. ....+..++... .++
T Consensus 89 ~a~~~~~~~~~~~~~~~~~~~-gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~----- 162 (432)
T 3a9z_A 89 ESNNLVIHSTVRCFHEQQTLQ-GRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQ----- 162 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSS-----
T ss_pred HHHHHHHHHHHhhhhhccccC-CccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCC-----
Confidence 999999998742 21100012 368999999999863222222211111000000 001111222211 100
Q ss_pred CChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC----------CEEEEechhcC
Q 010250 247 ETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD----------ILFIADEVICA 316 (514)
Q Consensus 247 ~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~g----------illI~DEv~tG 316 (514)
.++++|++.+. +++++|+++++++++|.+.+ +++|.++|++|| +++|+||+|.
T Consensus 163 --------~d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~~~~~~~~~~~livDea~~- 225 (432)
T 3a9z_A 163 --------VEVEDILAAVR----PTTCLVTIMLANNETGVIMP----ISEISRRIKALNQIRAASGLPRVLVHTDAAQA- 225 (432)
T ss_dssp --------CCHHHHHHTCC----TTEEEEECCSBCTTTCBBCC----HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTT-
T ss_pred --------cCHHHHHHhcc----CCceEEEEECcccCcccccC----HHHHHHHHHhcCcccccccCCceEEEEEchhh-
Confidence 11466666553 36889999999999999887 899999999999 9999999995
Q ss_pred cccccccceecccCCCCchhc--hhhhhcCCcccceeEEeCHHH-HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHH
Q 010250 317 FGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGAILVSPEV-SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALK 393 (514)
Q Consensus 317 ~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig~v~~~~~i-~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~ 393 (514)
+|+.. . +.....+|+++ ++|.+ | .++|++++++++ ...+.+.....+......+++.++.+++++.++++
T Consensus 226 ~~~~~--~--~~~~~~~d~~~~s~~K~~--g-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~ 298 (432)
T 3a9z_A 226 LGKRR--V--DVEDLGVDFLTIVGHKFY--G-PRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAAD 298 (432)
T ss_dssp TTTSC--C--CHHHHCCSEEEEEGGGTT--C-CSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHH
T ss_pred hCCcc--c--ChhhcCCCEEEEehhHhc--C-CcceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHH
Confidence 55432 1 21123478765 58976 3 469999998875 22222100000000111234567888888888888
Q ss_pred HHhh--ccHHHHHHHHHHHHHhhhhhccCCCce--eE---EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH----
Q 010250 394 IYKE--RNIVEQVNKIAPKFQDGVKAFSDSPII--GE---IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC---- 462 (514)
Q Consensus 394 ~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~--~~---v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l---- 462 (514)
.+++ +++.++++++++++.+.|+++....+. .. .+..+.+..+.+.+.... ...+...+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~i~ 368 (432)
T 3a9z_A 299 LVSENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLR----------GYMVLAQCQTLL 368 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTCC----------HHHHHHHCSSEE
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCCc----------HHHHHHHhcCeE
Confidence 7655 457788889999999999875221111 10 123355667777542100 12222222
Q ss_pred -------------------HHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 463 -------------------EKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 463 -------------------~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
...|+......+.|||+++..+|++|+++++++|+++++++.
T Consensus 369 ~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~ 429 (432)
T 3a9z_A 369 ASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLE 429 (432)
T ss_dssp CBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EeccccccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 122221111236799999988899999999999999987543
No 149
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.89 E-value=1.4e-22 Score=209.22 Aligned_cols=339 Identities=11% Similarity=0.058 Sum_probs=214.2
Q ss_pred CCCEEEEccCCcccccCCC--CCHHHHHHHHH-HHhcCCccccccccCCchHHHHHHHHHHhcCc-----CCCCeEEE--
Q 010250 98 NGKKYLDSLAGLWCTALGG--SEPRLVAAATA-QLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-----SKMAKVFF-- 167 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh--~~p~v~~A~~~-~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-----~~~~~v~~-- 167 (514)
+|+.++||.+|....+-|+ .+|.|.+|+.+ +++.... +. + .+.....++.+.+++++.. ...++|++
T Consensus 27 ~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~-~~-y-~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~ 103 (412)
T 1yaa_A 27 QRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYN-HE-Y-LGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQ 103 (412)
T ss_dssp CCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCC-CC-C-CCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEE
T ss_pred CCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccc-cC-C-CCCCCcHHHHHHHHHHHhcCCCCCCCcceEEEEe
Confidence 4677899998865444454 46899999998 8763211 00 1 1223346677777776621 13578999
Q ss_pred eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcccCCCC
Q 010250 168 TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYWRYAHP 245 (514)
Q Consensus 168 ~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 245 (514)
++||++|++.+++++... .++++|++.+++|++........+.. . ..++. +..+.
T Consensus 104 t~g~~~a~~~~~~~~~~~------~~gd~Vl~~~p~~~~~~~~~~~~g~~-~------------~~v~~~~~~~~~---- 160 (412)
T 1yaa_A 104 SLSGTGALHISAKFFSKF------FPDKLVYLSKPTWANHMAIFENQGLK-T------------ATYPYWANETKS---- 160 (412)
T ss_dssp EEHHHHHHHHHHHHHHHH------CTTCCEEEEESCCTTHHHHHHTTTCC-E------------EEEECEETTTTE----
T ss_pred ccchHhHHHHHHHHHHHh------CCCCEEEEeCCCCccHHHHHHHcCce-E------------EEEeeecCCCCc----
Confidence 999999999997766533 23468999999999975433322211 1 01111 00011
Q ss_pred CCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc---c
Q 010250 246 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG---T 322 (514)
Q Consensus 246 ~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G---~ 322 (514)
.++++|++.+.+.. ...+++++...++++|.+ .+.+.+++|.++|++||+++|+||+|.+|++.| .
T Consensus 161 ---------~d~~~l~~~l~~~~-~~~~~~~~~~p~nPtG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~ 229 (412)
T 1yaa_A 161 ---------LDLNGFLNAIQKAP-EGSIFVLHSCAHNPTGLD-PTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKD 229 (412)
T ss_dssp ---------ECHHHHHHHHHHSC-TTCEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHH
T ss_pred ---------cCHHHHHHHHHhCC-CCCEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEecccccccCCcccch
Confidence 12577888776432 234555545556666754 467889999999999999999999999886654 2
Q ss_pred ccee-cccCCCC----ch--hchhhhhcCCcccceeEE--e-----CHH----HHHHhhhccCCCCcccccCCCCCcHHH
Q 010250 323 MFGC-DKYSIKP----DL--VSFAKALSSAYMPIGAIL--V-----SPE----VSEVIHSQSNTLGSFSHGFTYSGHPVS 384 (514)
Q Consensus 323 ~~~~-~~~gv~p----Di--v~~sK~l~gG~~pig~v~--~-----~~~----i~~~l~~~~~~~~~~~~~~t~~~~pl~ 384 (514)
.... ......+ ++ .++||.++..++++|+++ + +++ +++.+.. .....+.+.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~-------~~~~~~~~~~~~~ 302 (412)
T 1yaa_A 230 AYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAK-------IIRSEVSNPPAYG 302 (412)
T ss_dssp THHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHH-------HHHTTTSSCCHHH
T ss_pred hHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHH-------HHhhccCCCChHH
Confidence 2222 1111223 22 368999987238999998 7 566 6766653 1112233457888
Q ss_pred HHHHHHHHHHHh--------hccHHHHHHHHHHHHHhhhhhcc---CCCceeEEEeee-eeEEEEEccCCCCCCCCCCcc
Q 010250 385 CAVAIEALKIYK--------ERNIVEQVNKIAPKFQDGVKAFS---DSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEW 452 (514)
Q Consensus 385 ~aaa~aal~~~~--------~~~~~~~~~~~~~~l~~~L~~l~---~~~~~~~v~g~g-~~~~i~~~~~~~~~~~~~~~~ 452 (514)
++++.++|+... -+++.++++++++++.+.|+++. ...+. ...+ .+..+.+.
T Consensus 303 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---~~~~~~~~~~~~~------------- 366 (412)
T 1yaa_A 303 AKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHI---VNQCGMFSFTGLT------------- 366 (412)
T ss_dssp HHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHH---HHCCSSEEECCCC-------------
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeee---ccCceEEEeeCCC-------------
Confidence 888888887542 23567788888899999998762 12222 1223 33222111
Q ss_pred chHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 453 GIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 453 ~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
...+...+.++||++.+ .+||+++. .|++++++++++|+++++.
T Consensus 367 --~~~~~~~l~~~gi~v~~---~~Ris~~~-~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 367 --PQMVKRLEETHAVYLVA---SGRASIAG-LNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp --HHHHHHHHHHHCEECCT---TSEEEGGG-CCTTTHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHhCCEEecc---CcEEEEcc-CCHhHHHHHHHHHHHHHHh
Confidence 23354555678999876 57999763 5999999999999988753
No 150
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.89 E-value=1.6e-22 Score=207.57 Aligned_cols=338 Identities=12% Similarity=0.062 Sum_probs=210.3
Q ss_pred CCEEEEccCCcccccCCCCC--HHHHHHHHH-HHhcCCc-cccccccCCchHHHHHHHHHHhcCcC-----CCC--eEEE
Q 010250 99 GKKYLDSLAGLWCTALGGSE--PRLVAAATA-QLNTLPF-YHSFWNRTTKPSLDLAKELLEMFTAS-----KMA--KVFF 167 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~--p~v~~A~~~-~l~~~~~-~~~~~~~~~~~~~ela~~L~~~~~~~-----~~~--~v~~ 167 (514)
...++||..|.+..+.|+.+ |+|.+|+.+ +++.... .+. ......++.+.+++++... ..+ ++++
T Consensus 25 ~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~----~~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~ 100 (397)
T 3fsl_A 25 RSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYL----PMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQ 100 (397)
T ss_dssp CSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCC----CTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEE
T ss_pred CCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCC----CCCchHHHHHHHHHHHhcCCcccccccceEEEE
Confidence 34689999997666777765 999999999 8875221 111 1122345556666655221 346 8999
Q ss_pred eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcccCCCC
Q 010250 168 TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYWRYAHP 245 (514)
Q Consensus 168 ~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 245 (514)
++||++|++.++++.... .++++|++.+++|++........+.... .++. ++.+.
T Consensus 101 t~g~~~a~~~~~~~~~~~------~~gd~vl~~~p~~~~~~~~~~~~g~~~~-------------~~~~~~~~~~~---- 157 (397)
T 3fsl_A 101 TLGGSGALKVGADFLKRY------FPESGVWVSDPTWENHVAIFAGAGFEVS-------------TYPWYDEATNG---- 157 (397)
T ss_dssp ESHHHHHHHHHHHHHHHH------CTTCCEEEESSCCHHHHHHHHHTTCCEE-------------EECCEETTTTE----
T ss_pred cCCcHHHHHHHHHHHHhc------CCCCeEEEeCCCchhHHHHHHHcCCceE-------------EEeeeeccCCc----
Confidence 999999999998765322 3456899999999987544333222111 1111 00010
Q ss_pred CCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc--cc
Q 010250 246 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG--TM 323 (514)
Q Consensus 246 ~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G--~~ 323 (514)
.++++|++.+.+.. +++.++++...++++|.+. +.+.+++|.++|++||+++|+||+|++|...+ ..
T Consensus 158 ---------~d~~~l~~~l~~~~-~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~ 226 (397)
T 3fsl_A 158 ---------VRFNDLLATLKTLQ-AGSIVLLHPCCHNPTGADL-TNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDA 226 (397)
T ss_dssp ---------ECHHHHHHHHTTCC-TTCEEEECSSSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGG
T ss_pred ---------CcHHHHHHHHHhCC-CCCEEEEeCCCCCCCCcCC-CHHHHHHHHHHHHhCCEEEEEecCchhhccCccccc
Confidence 01577888776432 3567777777777788654 56779999999999999999999999886542 11
Q ss_pred ceeccc-CCCCc---hhchhhhhc-CCcccceeEEe---CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH
Q 010250 324 FGCDKY-SIKPD---LVSFAKALS-SAYMPIGAILV---SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY 395 (514)
Q Consensus 324 ~~~~~~-gv~pD---iv~~sK~l~-gG~~pig~v~~---~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~ 395 (514)
.....+ +..++ +.++||.++ .| +++|++++ ++++++.+.... .......+...++++++++.++++..
T Consensus 227 ~~~~~~~~~~~~~i~~~S~SK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~ 302 (397)
T 3fsl_A 227 YAIRAIASAGLPALVSNSFSKIFSLYG-ERVGGLSVMCEDAEAAGRVLGQL---KATVRRNYSSPPNFGAQVVAAVLNDE 302 (397)
T ss_dssp HHHHHHHHTTCCEEEEEECTTTTTCGG-GCCEEEEEECSSHHHHHHHHHHH---HHHHHTTTSSCCSHHHHHHHHHHTSH
T ss_pred HHHHHHHhcCCCEEEEecccccccCcC-CCeeEEEEecCCHHHHHHHHHHH---HHHHHhccCCCCHHHHHHHHHHhcCH
Confidence 111111 22222 336899988 45 89999974 556665443210 01111223344666666666555421
Q ss_pred ------h--hccHHHHHHHHHHHHHhhhhhcc---CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH
Q 010250 396 ------K--ERNIVEQVNKIAPKFQDGVKAFS---DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK 464 (514)
Q Consensus 396 ------~--~~~~~~~~~~~~~~l~~~L~~l~---~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 464 (514)
. -+++.++++++.+++.+.|+++. ..... ....|.+..+.+. ...+...+.+
T Consensus 303 ~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~~~~~~~~~~~~---------------~~~~~~~l~~ 365 (397)
T 3fsl_A 303 ALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYL--LNQRGMFSYTGLS---------------AAQVDRLREE 365 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHH--HHCCSSEEECCCC---------------HHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceee--cCCceEEEecCCC---------------HHHHHHHHHh
Confidence 1 13567888889999999998762 12211 1122334333321 2346667788
Q ss_pred CCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250 465 HGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKA 499 (514)
Q Consensus 465 ~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~ 499 (514)
+||++.+++ ||++. .+++++|++++++|+++
T Consensus 366 ~gi~v~~g~---Ris~~-~~~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 366 FGVYLIASG---RMCVA-GLNTANVQRVAKAFAAV 396 (397)
T ss_dssp TCEECCTTC---EEEGG-GCCTTTHHHHHHHHHHH
T ss_pred CCEEECCCC---eEEEE-ecCHhhHHHHHHHHHhh
Confidence 999998765 88863 45778899999999875
No 151
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.89 E-value=1.9e-21 Score=201.16 Aligned_cols=305 Identities=13% Similarity=0.104 Sum_probs=200.9
Q ss_pred ccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCC
Q 010250 112 TALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGR 191 (514)
Q Consensus 112 ~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~ 191 (514)
..++|.+|+.++++.. ....+.+. ....+...+++++++++++ .+++++++||++|++.+++.+.
T Consensus 28 ~~~~~~~~~~~~~~~~--~~~~~~y~--~~~~~~~~~l~~~la~~~g---~~~~~~~~~gt~a~~~al~~l~-------- 92 (412)
T 2cb1_A 28 AAYGFKTLEEGQERFA--TGEGYVYA--RQKDPTAKALEERLKALEG---ALEAVVLASGQAATFAALLALL-------- 92 (412)
T ss_dssp SBCCCSSHHHHHHHHH--HCCSCSBT--TTCCHHHHHHHHHHHHHHT---CSEEEEESSHHHHHHHHHHTTC--------
T ss_pred ceeecCChHHHHHHhc--cccCcCcC--CCCChHHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHHh--------
Confidence 4577877776665544 22222111 1234667889999999983 4589999999999999998763
Q ss_pred CCccEEEEEecCCcccceee---eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC
Q 010250 192 PNKKKFIARQKSYHGSTLIA---ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG 268 (514)
Q Consensus 192 ~~~~~ii~~~~~yHG~t~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~ 268 (514)
.++++|++.++.|++..... ....|.. +..++. + .++|++.+.
T Consensus 93 ~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~------------~~~~~~-------------~------~~~l~~~i~--- 138 (412)
T 2cb1_A 93 RPGDEVVAAKGLFGQTIGLFGQVLSLMGVT------------VRYVDP-------------E------PEAVREALS--- 138 (412)
T ss_dssp CTTCEEEEETTCCHHHHHHHHHTTTTTTCE------------EEEECS-------------S------HHHHHHHCC---
T ss_pred CCCCEEEEeCCCchhHHHHHHHHHHHcCCE------------EEEECC-------------C------HHHHHHHhc---
Confidence 33568999999887643211 1111111 111111 0 367777664
Q ss_pred CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCc
Q 010250 269 PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAY 346 (514)
Q Consensus 269 ~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~ 346 (514)
+++++|++|++++++|.+.+ +++|.++|++||+++|+||+|++++... ...+..+|+++ ++|.+++++
T Consensus 139 -~~~~~v~~~~~~n~~G~~~~----l~~i~~l~~~~~~~li~D~~~~~~~~~~-----~~~~~~~di~~~S~~K~~~~~~ 208 (412)
T 2cb1_A 139 -AKTRAVFVETVANPALLVPD----LEALATLAEEAGVALVVDNTFGAAGALC-----RPLAWGAHVVVESLTKWASGHG 208 (412)
T ss_dssp -TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHTCEEEEECGGGTTTTSC-----CGGGGTCSEEEEETTTTTTCSS
T ss_pred -cCCeEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEECCCccccccC-----CccccCCeEEEECCcccccCCC
Confidence 46889999999999999886 9999999999999999999998653221 22234578876 789998765
Q ss_pred ccceeEEeCH----------------------------HHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc
Q 010250 347 MPIGAILVSP----------------------------EVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER 398 (514)
Q Consensus 347 ~pig~v~~~~----------------------------~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~ 398 (514)
.++|++++.+ ++.+.++... .....+..+|.+++.+...++.+.
T Consensus 209 ~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~------~~~~g~~~~~~~a~~~~~~l~~l~-- 280 (412)
T 2cb1_A 209 SVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLG------LSLCGMALSPFNAYLLFQGLETVA-- 280 (412)
T ss_dssp CCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHH------TTTTCCCCCHHHHHHHHHHGGGHH--
T ss_pred CcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHH------HHhcCCCCChHHhHHHHcCCchHH--
Confidence 7889887644 3333333210 011223557888888777776553
Q ss_pred cHHHHHHHHHHHHHhhhhhccCCCcee-E--------------EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH
Q 010250 399 NIVEQVNKIAPKFQDGVKAFSDSPIIG-E--------------IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE 463 (514)
Q Consensus 399 ~~~~~~~~~~~~l~~~L~~l~~~~~~~-~--------------v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 463 (514)
...++..++.+++.+.|.+......+. . .++.|.++.+.+ . . .+.+...|.
T Consensus 281 ~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~-~-~------------~~~~~~~l~ 346 (412)
T 2cb1_A 281 LRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL-G-D------------LERASRFLG 346 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC-S-S------------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe-C-C------------HHHHHHHHH
Confidence 335566678888888887652222110 0 035677888888 3 2 234556677
Q ss_pred HCCcEEEee-------------------------------CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250 464 KHGMLVRVS-------------------------------GDNIMMSPPFIMSPEEVDELISKYGK 498 (514)
Q Consensus 464 ~~Gv~~~~~-------------------------------g~~iRi~p~~~~t~e~id~~~~~l~~ 498 (514)
+.|+.+ .. .+.||++.....++++|+.++++|++
T Consensus 347 ~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 347 AIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp HCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred hCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 788886 32 25699999999999999999988864
No 152
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.89 E-value=2.1e-21 Score=197.75 Aligned_cols=339 Identities=14% Similarity=0.136 Sum_probs=214.9
Q ss_pred EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-ccccc---cCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250 101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFWN---RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 176 (514)
Q Consensus 101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~~~~~---~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~ 176 (514)
.|||+.++ |+.+|+|++|+.+++.+.... ++.+. ...+...++.+.++++++. +.+++++++||++|++
T Consensus 2 ~yld~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~-~~~~v~~~~g~t~a~~ 74 (382)
T 4eb5_A 2 AYFDYTSA------KPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNG-GGGTVVFTSGATEANN 74 (382)
T ss_dssp CBCBTTTC------CCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTC-TTEEEEEESSHHHHHH
T ss_pred eeeccCCC------CCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCC-CCCeEEEcCchHHHHH
Confidence 37887655 468999999999998753111 11010 1234567889999998853 3468999999999999
Q ss_pred HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeec--CCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250 177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL--SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254 (514)
Q Consensus 177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
.+++.+..+.. .+++.|++.+++|++.......+ .|.. +..++....+.
T Consensus 75 ~~~~~l~~~~~----~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~~------------- 125 (382)
T 4eb5_A 75 LAIIGYAMRNA----RKGKHILVSAVEHMSVINPAKFLQKQGFE------------VEYIPVGKYGE------------- 125 (382)
T ss_dssp HHHHHHHHHHG----GGCCEEEEETTCCHHHHHHHHHHTTTTCE------------EEEECBCTTSC-------------
T ss_pred HHHHHHHhhcc----CCCCEEEECCCcchHHHHHHHHHHhCCcE------------EEEeccCCCCc-------------
Confidence 99998752211 12357999999988763322211 1211 11111111110
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCc
Q 010250 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPD 334 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pD 334 (514)
.++++|++.+. +++++|+++.+++++|.+.+ +++|.++|++||++ |+||+|+ +|... .....+ .+|
T Consensus 126 ~d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~-i~D~a~~-~g~~~--~~~~~~--~~d 191 (382)
T 4eb5_A 126 VDVSFIDQKLR----DDTILVSVQHANNEIGTIQP----VEEISEVLAGKAAL-HIDATAS-VGQIE--VDVEKI--GAD 191 (382)
T ss_dssp BCHHHHHHHCC----TTEEEEECCSBCTTTCBBCC----HHHHHHHHTTSSEE-EEECTTT-BTTBC--CCHHHH--TCS
T ss_pred cCHHHHHHHhc----CCCeEEEEeccCCCccccCC----HHHHHHHHHHCCCE-EEEcchh-cCCcc--cCcccc--CCC
Confidence 11467776664 35788999999999998887 89999999999999 9999997 65331 112222 467
Q ss_pred hhc--hhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHH
Q 010250 335 LVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPK 410 (514)
Q Consensus 335 iv~--~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~ 410 (514)
+++ ++|.++. .++|+++++++. .+.+.....+........+.++..++++.++++.+.+ +++.++++++.++
T Consensus 192 i~~~s~sK~~g~--~g~G~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~ 267 (382)
T 4eb5_A 192 MLTISSNDIYGP--KGVGALWIRKEA--KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDR 267 (382)
T ss_dssp EEEEETGGGTCC--SSCEEEEEETTC--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeehHHhcCC--CceEEEEEcccc--ccCceecCCCccccccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 764 5696432 347888888763 1211000000000111234566677777778887654 3567778888888
Q ss_pred HHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----------------
Q 010250 411 FQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------------- 472 (514)
Q Consensus 411 l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------------- 472 (514)
+.+.|+++....+.... ...+.++.+.+... ....+.+.|.++||.+.++
T Consensus 268 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~ 335 (382)
T 4eb5_A 268 IIDNVLKIEESYLNGHPEKRLPNNVNVRFSYI------------EGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMAC 335 (382)
T ss_dssp HHHHHTTSTTEEECSCSSSBCTTEEEEEETTS------------CHHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHT
T ss_pred HHHHHhhCCCeEEeCCcccCCCCEEEEEeCCc------------CHHHHHHHHHHCCEEEeccccccCCCCcccHHHHHc
Confidence 88888765211111100 01244666666421 1456788888999998863
Q ss_pred -------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 473 -------GDNIMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 473 -------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
.+.|||+++..+|++++++++++|+++++++.+
T Consensus 336 g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 336 GLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp TCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 257999988889999999999999999877654
No 153
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.89 E-value=3.8e-22 Score=205.31 Aligned_cols=284 Identities=15% Similarity=0.102 Sum_probs=186.6
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee---ecCCCc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA---SLSGLP 218 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~---~~s~~~ 218 (514)
+.+...+++++++++++ .+++++++||++|++.+++.+. .++++||+.++.||+...... ...|..
T Consensus 62 ~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~~l~~~~--------~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~ 130 (398)
T 2rfv_A 62 GNPTTDALEKKLAVLER---GEAGLATASGISAITTTLLTLC--------QQGDHIVSASAIYGCTHAFLSHSMPKFGIN 130 (398)
T ss_dssp CCHHHHHHHHHHHHHHT---CSEEEEESSHHHHHHHHHHHHC--------CTTCEEEEESSSCHHHHHHHHTHHHHTTCE
T ss_pred CChHHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEcCCCcccHHHHHHHHHHHcCCE
Confidence 56777899999999984 3478889999999999998773 335789999999988643221 111211
Q ss_pred cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250 219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 298 (514)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~ 298 (514)
+..++.. +++++++.+. +++++|+++++++++|.+.+ +++|.
T Consensus 131 ------------~~~v~~~------------------d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----l~~i~ 172 (398)
T 2rfv_A 131 ------------VRFVDAA------------------KPEEIRAAMR----PETKVVYIETPANPTLSLVD----IETVA 172 (398)
T ss_dssp ------------EEEECTT------------------SHHHHHHHCC----TTEEEEEEESSBTTTTBCCC----HHHHH
T ss_pred ------------EEEeCCC------------------CHHHHHHhcC----CCCeEEEEECCCCCCCcccC----HHHHH
Confidence 1111111 1466666653 36889999999999999886 99999
Q ss_pred HHHHhcCCEEEEechhcCcccccccceecccCCCCch--hchhhhhcCCcccc-eeEEeCHHHHH-HhhhccCCCCcccc
Q 010250 299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL--VSFAKALSSAYMPI-GAILVSPEVSE-VIHSQSNTLGSFSH 374 (514)
Q Consensus 299 ~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDi--v~~sK~l~gG~~pi-g~v~~~~~i~~-~l~~~~~~~~~~~~ 374 (514)
++|++||+++|+||+|+.+ ..+... .++ +|+ .+++|.+++++.|+ |++++++++++ .+.. +.+
T Consensus 173 ~l~~~~~~~li~De~~~~~-~~~~~~---~~~--~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~-------~~~ 239 (398)
T 2rfv_A 173 GIAHQQGALLVVDNTFMSP-YCQQPL---QLG--ADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFV-------GLK 239 (398)
T ss_dssp HHHHHTTCEEEEECTTTCT-TTCCGG---GGT--CSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHT-------HHH
T ss_pred HHHHHcCCEEEEECCCccc-ccCCch---hhC--CcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHH-------HHH
Confidence 9999999999999999832 333221 223 565 47889998755788 99999998876 5542 233
Q ss_pred cC-CCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-----------cCCCceeE----EEeeeeeEEEEE
Q 010250 375 GF-TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-----------SDSPIIGE----IRGTGLILGTEF 438 (514)
Q Consensus 375 ~~-t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-----------~~~~~~~~----v~g~g~~~~i~~ 438 (514)
.. +.+.++++++++.++|+.+.+ ..++..++.+.+.+.|++. ...|.+.. .++.|.++.+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~ 317 (398)
T 2rfv_A 240 DITGGCMSPFNAWLTLRGVKTLGI--RMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEI 317 (398)
T ss_dssp HTTCCCCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEE
T ss_pred hCCCCCCCHHHHHHHHhhhhhHHH--HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEE
Confidence 33 456789999999988875432 2344444555555555432 11121111 124688888888
Q ss_pred ccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----------------------------CCEEEEeCCCCCCHHHHH
Q 010250 439 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------------------------GDNIMMSPPFIMSPEEVD 490 (514)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------------------------g~~iRi~p~~~~t~e~id 490 (514)
.+.. .....+...+...|+.+.++ .+.|||+++...++++|+
T Consensus 318 ~~~~----------~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~ 387 (398)
T 2rfv_A 318 AGGL----------EAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIIN 387 (398)
T ss_dssp TTHH----------HHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHH
T ss_pred cCCH----------HHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHH
Confidence 6310 01222333333334443221 357999999999999999
Q ss_pred HHHHHHHHH
Q 010250 491 ELISKYGKA 499 (514)
Q Consensus 491 ~~~~~l~~~ 499 (514)
.++++|+++
T Consensus 388 ~l~~al~~~ 396 (398)
T 2rfv_A 388 DLEHAIRKA 396 (398)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 988888653
No 154
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.89 E-value=1.6e-22 Score=209.74 Aligned_cols=343 Identities=10% Similarity=0.032 Sum_probs=215.6
Q ss_pred EEEccCCccccc-CCCCCHHHHHHHHHHHh--cCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHH--H
Q 010250 102 YLDSLAGLWCTA-LGGSEPRLVAAATAQLN--TLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAN--D 176 (514)
Q Consensus 102 ylD~~s~~~~~~-lGh~~p~v~~A~~~~l~--~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~--~ 176 (514)
.|||..|..... ++ .+|.+++++.+++. ...... .| .......++.+.|+++++ .+.++|++++++++++ .
T Consensus 34 ~i~l~~g~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~-~Y-~~~~G~~~lr~~ia~~~~-~~~~~i~~t~G~~~al~l~ 109 (422)
T 3d6k_A 34 SLDLTRGKPSAEQLD-LSNDLLSLPGGDFRTKDGVDCR-NY-GGLLGIADIRELWAEALG-LPADLVVAQDGSSLNIMFD 109 (422)
T ss_dssp CEECCCCSCCHHHHH-TTGGGGGCSTTCCBCTTCCBTT-SS-CCSSCCHHHHHHHHHHHT-CCGGGEEECSSCHHHHHHH
T ss_pred eEeCCCCCCChhhCC-CcHHHHHHHHHHHhhccchhhh-CC-CCCCCCHHHHHHHHHHhC-CChhHEEEecchHHHHHHH
Confidence 688877743100 22 34567777665531 110010 11 122235788888888874 4567999999999997 5
Q ss_pred HHHHHHHHHHhhcCCCC--------ccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCC
Q 010250 177 TQVKLVWYYNNALGRPN--------KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET 248 (514)
Q Consensus 177 ~Alk~a~~~~~~~~~~~--------~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (514)
.+++.... ...++ +++|++.+++|++........+.... .++...
T Consensus 110 ~~~~~l~~----~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~-------------~v~~~~---------- 162 (422)
T 3d6k_A 110 LISWSYTW----GNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMI-------------NVPMTD---------- 162 (422)
T ss_dssp HHHHHHHH----CCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEE-------------EEEEET----------
T ss_pred HHHHHhcC----cccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEE-------------ecCCCC----------
Confidence 55555431 10011 34799999999988644333222111 011000
Q ss_pred hhHHHHHHHHHHHHHHHHhCCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHHH-hcCCEEEEechhc--Ccccccccc
Q 010250 249 EEEYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVK-KYDILFIADEVIC--AFGRLGTMF 324 (514)
Q Consensus 249 ~~~~~~~~~~~le~li~~~~~~~~aavivEp-v~~~~G~~~p~~~~L~~l~~l~~-~~gillI~DEv~t--G~gr~G~~~ 324 (514)
+. .++++|++.+.. .++++|++.| .++++|.+ .+.+++++|.++|+ +||+++|+||+|. +|+..|..+
T Consensus 163 -~g---~d~~~l~~~l~~---~~~~~v~~~~~~~NPtG~~-~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~ 234 (422)
T 3d6k_A 163 -EG---PDMGVVRELVKD---PQVKGMWTVPVFGNPTGVT-FSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIV 234 (422)
T ss_dssp -TE---ECHHHHHHHHTS---TTEEEEEECCSSCTTTCCC-CCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCC
T ss_pred -CC---CCHHHHHHHHhc---CCCeEEEEcCCCCCCCCCC-CCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCC
Confidence 00 125777777742 3577777555 46667765 46789999999999 9999999999997 465544321
Q ss_pred -ee-------cccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH-
Q 010250 325 -GC-------DKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY- 395 (514)
Q Consensus 325 -~~-------~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~- 395 (514)
.. +..+...++.+|||.+..| +++|++++++++++.+.. .....+++.++++++++.++|+..
T Consensus 235 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~G-lriG~~~~~~~l~~~l~~-------~~~~~~~~~~~~~q~a~~~~l~~~~ 306 (422)
T 3d6k_A 235 HNVIEFAQAAGNPNRFWFMSSTSKITHAG-SGVSFFASSKENIEWYAS-------HANVRGIGPNKLNQLAHAQFFGDVA 306 (422)
T ss_dssp CCHHHHHHHTTCTTCEEEEEESTTTSCTT-SSCEEEECCHHHHHHHHH-------HHHHHCSCCCHHHHHHHHHHHCSHH
T ss_pred cChhhHhhccCCCCcEEEEcChhhhcCcc-cceEEEEeCHHHHHHHHH-------HHHhhcCCCCHHHHHHHHHHHhCcc
Confidence 22 1223334455899984445 899999999999988863 233456778899999888887631
Q ss_pred --hh--ccHHHHHHHHHHHHHhhhhhc-cCCCceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEE
Q 010250 396 --KE--RNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV 469 (514)
Q Consensus 396 --~~--~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~ 469 (514)
.+ ++..+.++++.+.+.+.|.+. ...+.+..+. ..|.++++.+.... ...+...|.++||++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~~------------~~~~~~~l~~~gV~v 374 (422)
T 3d6k_A 307 GLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPGT------------ASRVVELAKEAGIAL 374 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTTC------------HHHHHHHHHHTTEEC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCCC------------HHHHHHHHHHCCeEE
Confidence 11 223455566667777777653 2223222222 24677888885320 345778889999999
Q ss_pred Eee-----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 470 RVS-----------GDNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 470 ~~~-----------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
.++ .+.|||+++. ++++++++++++|+++++++.
T Consensus 375 ~~~g~~f~~~~~~~~~~iRis~~~-~~~e~i~~~~~~l~~~l~~~~ 419 (422)
T 3d6k_A 375 TGAGSSFPLHNDPNNENIRLAPSL-PPVAELEVAMDGFATCVLMAA 419 (422)
T ss_dssp CCTTTTSGGGCCTTSCEEEECCSS-SCHHHHHHHHHHHHHHHHHHH
T ss_pred EcCccccCCCCCCCCCeEEEecCC-CCHHHHHHHHHHHHHHHHHHH
Confidence 872 2469999776 899999999999999987654
No 155
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.88 E-value=2.3e-21 Score=204.24 Aligned_cols=333 Identities=13% Similarity=0.101 Sum_probs=210.5
Q ss_pred CCCCCHHHHHHHHHHHhcCCcccc--ccccCCchHHHHHHHHHHhcCcCCCC-eEEEeCChhHHHHHHHHHHHHHHhhcC
Q 010250 114 LGGSEPRLVAAATAQLNTLPFYHS--FWNRTTKPSLDLAKELLEMFTASKMA-KVFFTNSGSEANDTQVKLVWYYNNALG 190 (514)
Q Consensus 114 lGh~~p~v~~A~~~~l~~~~~~~~--~~~~~~~~~~ela~~L~~~~~~~~~~-~v~~~~sGseA~~~Alk~a~~~~~~~~ 190 (514)
.+|.+|++++++.++...+..+.. ...+..+...+++++++++++ .+ .++++++|++|+..|+++++.+...++
T Consensus 75 ~~~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g---~~~~~~~~~ggt~a~~~al~~~~~~~~~~G 151 (474)
T 1wyu_B 75 TMKYNPKLHEEAARLFADLHPYQDPRTAQGALRLMWELGEYLKALTG---MDAITLEPAAGAHGELTGILIIRAYHEDRG 151 (474)
T ss_dssp CCCCCCHHHHHHHHTTSSCCTTSCGGGCHHHHHHHHHHHHHHHHHHT---CSEEECCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred cccCCHHHHHHHHHHHHhcCCCCchhhChHHHHHHHHHHHHHHHHHC---CCceeecChHHHHHHHHHHHHHHHHHHhcC
Confidence 457789999988876322111110 011223456778888888873 33 355789999999999999887654445
Q ss_pred C-CCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC
Q 010250 191 R-PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP 269 (514)
Q Consensus 191 ~-~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~ 269 (514)
. +++++||+.+ .+|+....++...|... ..+++...++ .++++|++.+.
T Consensus 152 d~~~r~~Vlv~~-~~h~~~~~~~~~~G~~v------------v~v~~~~~~~-------------~d~~~L~~~i~---- 201 (474)
T 1wyu_B 152 EGRTRRVVLVPD-SAHGSNPATASMAGYQV------------REIPSGPEGE-------------VDLEALKRELG---- 201 (474)
T ss_dssp CTTTCCEEEEET-TSCTHHHHHHHHTTCEE------------EEECBCTTSS-------------BCHHHHHHHCS----
T ss_pred CccCCCEEEEeC-CcChhhHHHHHHCCCEE------------EEecCCCCCC-------------cCHHHHHHhhC----
Confidence 3 4556777766 66676655544433221 1122211111 11577777664
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhch--hhhhcC---
Q 010250 270 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSS--- 344 (514)
Q Consensus 270 ~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~--sK~l~g--- 344 (514)
+++++|+++..+ ..|.+. +.+++|.++|++||+++|+||+|.. +..|.. ....+ .+|++++ +|.+++
T Consensus 202 ~~t~~v~~~~pn-~~G~~~---~~l~~i~~l~~~~g~~li~Dea~~~-~~~g~~-~~~~~--g~di~~~s~~K~~~~p~g 273 (474)
T 1wyu_B 202 PHVAALMLTNPN-TLGLFE---RRILEISRLCKEAGVQLYYDGANLN-AIMGWA-RPGDM--GFDVVHLNLHKTFTVPHG 273 (474)
T ss_dssp TTEEEEEECSSC-TTSCCC---TTHHHHHHHHHHHTCEEEEEGGGGG-GTTTTC-CHHHH--TCSEEECCTTTTTCCCCT
T ss_pred CCceEEEEECCC-CCcccC---CCHHHHHHHHHHcCCEEEEeCchhh-hhccCC-CcccC--CCcEEEEeCccccccCCC
Confidence 467888888754 578773 2299999999999999999999963 233321 11222 3788866 798763
Q ss_pred -CcccceeEEeCHHHHHHhhhc-----cC-------CCCcccccCCCCCcHHHHHHHHHHHHHHhhccH---HHHHHHHH
Q 010250 345 -AYMPIGAILVSPEVSEVIHSQ-----SN-------TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI---VEQVNKIA 408 (514)
Q Consensus 345 -G~~pig~v~~~~~i~~~l~~~-----~~-------~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~---~~~~~~~~ 408 (514)
|+.++|++++++++++.+... +. .........++++++++++++.+.++.+..+.+ .+++.+++
T Consensus 274 ~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~ 353 (474)
T 1wyu_B 274 GGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNA 353 (474)
T ss_dssp TSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEEcHHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 336899999999987766410 00 000000112345788888888888876544444 77788899
Q ss_pred HHHHhhhhhccCCCceeEEEeeeee--EEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee------CCEEEEeC
Q 010250 409 PKFQDGVKAFSDSPIIGEIRGTGLI--LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS------GDNIMMSP 480 (514)
Q Consensus 409 ~~l~~~L~~l~~~~~~~~v~g~g~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~------g~~iRi~p 480 (514)
+++.+.|+++ ...+.. +.+.+ +.+.+.. . . ....+.+.|.++|+.+... .+.+||++
T Consensus 354 ~~l~~~L~~~-g~~~~~---~~~~~~~~~~~~~~-~--~--------~~~~l~~~L~~~Gi~~~~~~~~~~~~~~lRis~ 418 (474)
T 1wyu_B 354 RYLKELLKEK-GYRVPY---DGPSMHEFVAQPPE-G--F--------RALDLAKGLLELGFHPPTVYFPLIVKEALMVEP 418 (474)
T ss_dssp HHHHHHHHHT-TCBCSS---CSSCCSCEEEBCST-T--C--------CHHHHHHHHHHTTCCCCEESCSTTSTTCEEECC
T ss_pred HHHHHHHhhc-CcEecC---CCCcceEEEEEcCC-C--C--------CHHHHHHHHHHCCccccccccccccCCEEEEEe
Confidence 9999999875 332211 11111 2333311 0 0 1456888999999986321 35799999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH
Q 010250 481 PFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 481 ~~~~t~e~id~~~~~l~~~l~~ 502 (514)
+..+|++++++++++|++++++
T Consensus 419 ~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 419 TETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp CTTSCHHHHHHHHHHHHHHHTS
T ss_pred ecCCCHHHHHHHHHHHHHHHHh
Confidence 9888999999999999998865
No 156
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.88 E-value=1.8e-22 Score=209.65 Aligned_cols=303 Identities=10% Similarity=0.089 Sum_probs=200.1
Q ss_pred chHHHHHHHHHHhcCcCCCCeEEEeCChhHHH--HHHHHHHHHHHhhcCCC---------CccEEEEEecCCcccceeee
Q 010250 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEAN--DTQVKLVWYYNNALGRP---------NKKKFIARQKSYHGSTLIAA 212 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~--~~Alk~a~~~~~~~~~~---------~~~~ii~~~~~yHG~t~~~~ 212 (514)
....+|.+.|++++. ...++|++++|+++|+ +.+++.... +.+ .+++|++.+++|++......
T Consensus 78 ~g~~~lr~~ia~~~~-~~~~~i~~t~G~~~al~~~~~~~~l~~-----~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~ 151 (427)
T 3ppl_A 78 DGIVDIRQIWADLLG-VPVEQVLAGDASSLNIMFDVISWSYIF-----GNNDSVQPWSKEETVKWICPVPGYDRHFSITE 151 (427)
T ss_dssp SCCHHHHHHHHHHHT-SCGGGEEECSSCHHHHHHHHHHHHHHH-----CCTTCSSCGGGSSCCEEEEEESCCHHHHHHHH
T ss_pred CCcHHHHHHHHHHhC-CCcceEEEeCCcHHHHHHHHHHHHHhc-----cCCcccccccCCCCCEEEEcCCCcHHHHHHHH
Confidence 345788888888874 4567999999999999 577776542 102 15789999999998754333
Q ss_pred ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcc-ccCCCCcccCCh
Q 010250 213 SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPA 291 (514)
Q Consensus 213 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEp-v~~~~G~~~p~~ 291 (514)
..+.... .++... + ..++++|++.+. ..++++|++.| .++++|.+.+ .
T Consensus 152 ~~g~~~~-------------~v~~~~-----------~---g~d~~~l~~~l~---~~~~~~v~~~p~~~NPtG~~~~-~ 200 (427)
T 3ppl_A 152 RFGFEMI-------------SVPMNE-----------D---GPDMDAVEELVK---NPQVKGMWVVPVFSNPTGFTVT-E 200 (427)
T ss_dssp HTTCEEE-------------EEEEET-----------T---EECHHHHHHHTT---STTEEEEEECCSSCTTTCCCCC-H
T ss_pred HcCCEEE-------------EeCCCC-----------C---CCCHHHHHHHHh---cCCCeEEEECCCCCCCCCccCC-H
Confidence 2221110 011100 0 012567777663 24678888886 4667787664 5
Q ss_pred hHHHHHHHHH-HhcCCEEEEechhcCcccccccc-eec---------ccCCCCchhchhhhhcCCcccceeEEeCHHHHH
Q 010250 292 TYFEKVQAVV-KKYDILFIADEVICAFGRLGTMF-GCD---------KYSIKPDLVSFAKALSSAYMPIGAILVSPEVSE 360 (514)
Q Consensus 292 ~~L~~l~~l~-~~~gillI~DEv~tG~gr~G~~~-~~~---------~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~ 360 (514)
+.+++|.++| ++||+++|+||+|+++...+... ... ..+....+.+|||.+..| +++|++++++++++
T Consensus 201 ~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G-~r~G~~~~~~~l~~ 279 (427)
T 3ppl_A 201 DVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAG-AGVSFFLTSAENRK 279 (427)
T ss_dssp HHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTT-SSCEEEECCHHHHH
T ss_pred HHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcC-ccEEEEEcCHHHHH
Confidence 6699999999 99999999999999853333210 111 223334455899985555 89999999999998
Q ss_pred HhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH---hh--ccHHHHHHHHHHHHHhhhhh-ccCCCcee-EEEeeeee
Q 010250 361 VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY---KE--RNIVEQVNKIAPKFQDGVKA-FSDSPIIG-EIRGTGLI 433 (514)
Q Consensus 361 ~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~---~~--~~~~~~~~~~~~~l~~~L~~-l~~~~~~~-~v~g~g~~ 433 (514)
.+.. .....+++.+++++.++.++++.. .+ ++..+.++++.+.+.+.|.+ +...+.+. .....|.+
T Consensus 280 ~~~~-------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~ 352 (427)
T 3ppl_A 280 WYTG-------HAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYF 352 (427)
T ss_dssp HHHH-------HHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSC
T ss_pred HHHH-------HhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEE
Confidence 8864 233456778888888887777531 11 23455566666666666654 22222121 11224677
Q ss_pred EEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 434 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----------GDNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 434 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
+++.+.+.. ...+.+.|.++||.+.++ .+.+||+++.. ++++|++++++|.+++++
T Consensus 353 ~~~~~~~~~------------~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~-~~~~i~~~~~~l~~~l~~ 419 (427)
T 3ppl_A 353 ISLDVVPGT------------ASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLP-PVEELEVAMDGVATCVLL 419 (427)
T ss_dssp EEEECSTTC------------HHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSS-CHHHHHHHHHHHHHHHHH
T ss_pred EEEECCcch------------HHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCC-CHHHHHHHHHHHHHHHHH
Confidence 888875421 445778899999999872 25699998544 999999999999999987
Q ss_pred HH
Q 010250 503 TE 504 (514)
Q Consensus 503 ~~ 504 (514)
+.
T Consensus 420 ~~ 421 (427)
T 3ppl_A 420 AA 421 (427)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 157
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.88 E-value=1.5e-22 Score=207.83 Aligned_cols=343 Identities=15% Similarity=0.116 Sum_probs=192.4
Q ss_pred EEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc----cccccccCCchHHHHHHHHHHhcCcCCCCeEEEe
Q 010250 93 YVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF----YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFT 168 (514)
Q Consensus 93 ~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~----~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~ 168 (514)
+.++.++..|||+.++ +..+|++++++.+++.+... .+.......+...+++++++++++. +.++++++
T Consensus 14 ~~~~~~~~iyld~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~~~~v~~~ 86 (400)
T 3vax_A 14 LVPRGSHMTYLDAAAT------TRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSA-EPDELIFT 86 (400)
T ss_dssp --------CCCCCCCC------SSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTC-CGGGEEEE
T ss_pred CCcccCCcEEecCCCC------CCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCC-CCCcEEEe
Confidence 3455677889998665 24689999999999864210 0110011234567888999998743 45789999
Q ss_pred CChhHHHHHHHHHHHHHHhhcCCCCcc-EEEEEecCCcccceeeeec--CCCccccCCCCCCCCcccccCCCCcccCCCC
Q 010250 169 NSGSEANDTQVKLVWYYNNALGRPNKK-KFIARQKSYHGSTLIAASL--SGLPALHQKFDLPAPFVLHTDCPHYWRYAHP 245 (514)
Q Consensus 169 ~sGseA~~~Alk~a~~~~~~~~~~~~~-~ii~~~~~yHG~t~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (514)
+||++|++.+++.+..+... +++ .||+.+..|++.......+ .|.. +..++....+.
T Consensus 87 ~g~t~al~~~~~~l~~~~~~----~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~~---- 146 (400)
T 3vax_A 87 SGATESNNIALLGLAPYGER----TGRRHIITSAIEHKAVLEPLEHLAGRGFE------------VDFLTPGPSGR---- 146 (400)
T ss_dssp SCHHHHHHHHHHTTHHHHHH----HTCCEEEEETTSCHHHHHHHHHHHTTTCE------------EEEECCCTTCC----
T ss_pred CCHHHHHHHHHHHHHHhhcc----CCCCEEEECccccHhHHHHHHHHHhcCCe------------EEEEccCCCCC----
Confidence 99999999999977432211 234 7888777776643222111 1211 11112111111
Q ss_pred CCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce
Q 010250 246 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG 325 (514)
Q Consensus 246 ~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~ 325 (514)
.++++|++.+. +++++|+++++++++|.+.+ +++|.++|++||+++|+||+|+ +|...
T Consensus 147 ---------~d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~-~~~~~---- 204 (400)
T 3vax_A 147 ---------ISVEGVMERLR----PDTLLVSLMHVNNETGVIQP----VAELAQQLRATPTYLHVDAAQG-YGKVP---- 204 (400)
T ss_dssp ---------CCHHHHHTTCC----TTEEEEECCSBCTTTCBBCC----HHHHHHHHTTSSCEEEEECTTT-TTTSG----
T ss_pred ---------cCHHHHHHhcC----CCceEEEEECCCCCceeeCc----HHHHHHHHHhcCCEEEEEhhhh-cCCCC----
Confidence 01466666553 46889999999999998887 8999999999999999999997 43321
Q ss_pred ecccCCCCchhch--hhhhcCCcccceeEE-eCHH-HH---HHhhhccCCCCccc-ccCCCCCcHHHHHHHHHHHHHHhh
Q 010250 326 CDKYSIKPDLVSF--AKALSSAYMPIGAIL-VSPE-VS---EVIHSQSNTLGSFS-HGFTYSGHPVSCAVAIEALKIYKE 397 (514)
Q Consensus 326 ~~~~gv~pDiv~~--sK~l~gG~~pig~v~-~~~~-i~---~~l~~~~~~~~~~~-~~~t~~~~pl~~aaa~aal~~~~~ 397 (514)
.+..+. +|++++ +| +.|+ .++|+++ ++++ +. ..+.+.... +... .......++.++++..++++.+.+
T Consensus 205 ~~~~~~-~d~~~~s~~K-~~g~-~g~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 280 (400)
T 3vax_A 205 GDLTTP-IDMISISGHK-IGAP-KGVGALVTRRREEMDDERVPLEPIMFG-GGQERKLRPGTLPVPLIMGLAEAAKIFEA 280 (400)
T ss_dssp GGGGSC-CSEEEEETGG-GTSC-SSCEEEEECBCSSSTTCBCCCCCSSCS-SCTGGGTSCSCCCHHHHHHHHHHHHHHHH
T ss_pred cChhhc-CcEEEEeHHH-hCCC-CceEEEEEecchhccccccccCceecC-CCceeeeecCCCCHHHHHHHHHHHHHHHh
Confidence 222233 788765 59 4443 4688888 7762 21 111110000 0000 112334567777777788887654
Q ss_pred --ccHHHHHHHHHHHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--
Q 010250 398 --RNIVEQVNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-- 472 (514)
Q Consensus 398 --~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-- 472 (514)
+++.++.+++++++.+.|+ +....+.... ...+.++.+.+... ....+.+.|. +||.++++
T Consensus 281 ~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~L~-~gi~v~~g~~ 346 (400)
T 3vax_A 281 EHAQWQVAAQDLRSRLLAGLA-STSFQVNGDQDHVVPHILNLSFEDV------------DAEAFLVTLK-DLVAVATGSA 346 (400)
T ss_dssp SHHHHHHHHHHHHHHHHHHHT-TTTCEECSCTTSBCTTEEEEECTTC------------CHHHHHHHHH-HHHHHTTTTE
T ss_pred hHHHHHHHHHHHHHHHHHhhC-CCCEEEeCCcccCCCCEEEEEeCCC------------CHHHHHHHHh-cCcEEEeccc
Confidence 4677888888899988887 4222111110 11234555655421 1456778888 88877642
Q ss_pred ----------------------CCEEEEeC-CCCCCHHHHHHHHHHHHHHHHH
Q 010250 473 ----------------------GDNIMMSP-PFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 473 ----------------------g~~iRi~p-~~~~t~e~id~~~~~l~~~l~~ 502 (514)
.+.|||++ +...|++++++++++|++++++
T Consensus 347 ~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 347 STSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp EEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC--------------------
T ss_pred ccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 26799999 8889999999999999988753
No 158
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.88 E-value=6.9e-21 Score=196.00 Aligned_cols=283 Identities=11% Similarity=0.044 Sum_probs=187.8
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee---ecCCCc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA---SLSGLP 218 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~---~~s~~~ 218 (514)
..+...+++++++++++ .+++++++||++|+..+++.+. .++++|++.++.||+...... ...+..
T Consensus 63 ~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~~l~~~~--------~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~ 131 (398)
T 1gc0_A 63 SNPTLNLLEARMASLEG---GEAGLALASGMGAITSTLWTLL--------RPGDEVLLGNTLYGCTFAFLHHGIGEFGVK 131 (398)
T ss_dssp CCHHHHHHHHHHHHHHT---CSEEEEESSHHHHHHHHHHHHC--------CTTCEEEEESSCCSHHHHHHHHTGGGGTCE
T ss_pred CChHHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHHh--------cCCCEEEEeCCCchhHHHHHHHHHHHcCCE
Confidence 45667889999999874 3478899999999999998773 335689999999988643221 111111
Q ss_pred cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250 219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 298 (514)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~ 298 (514)
+..++.. +.+++++.+. +++++|++|++++++|.+.+ +++|+
T Consensus 132 ------------~~~~~~~------------------d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----l~~i~ 173 (398)
T 1gc0_A 132 ------------LRHVDMA------------------DLQALEAAMT----PATRVIYFESPANPNMHMAD----IAGVA 173 (398)
T ss_dssp ------------EEEECTT------------------CHHHHHHHCC----TTEEEEEEESSCTTTCCCCC----HHHHH
T ss_pred ------------EEEECCC------------------CHHHHHHhcC----CCCeEEEEECCCCCCccccc----HHHHH
Confidence 1111110 1466766664 46899999999999998886 99999
Q ss_pred HHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccc-eeEEeCHHHHH-HhhhccCCCCccccc-
Q 010250 299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPI-GAILVSPEVSE-VIHSQSNTLGSFSHG- 375 (514)
Q Consensus 299 ~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pi-g~v~~~~~i~~-~l~~~~~~~~~~~~~- 375 (514)
++|++||+++|+||+|+.+ ..+... .++....+.+++|.+++++.|+ |++++++++++ .+.. ..++
T Consensus 174 ~l~~~~~~~li~D~~~~~~-~~~~~~---~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~-------~~~~~ 242 (398)
T 1gc0_A 174 KIARKHGATVVVDNTYCTP-YLQRPL---ELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQ-------GLKDM 242 (398)
T ss_dssp HHHGGGTCEEEEECTTTHH-HHCCGG---GGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHT-------HHHHH
T ss_pred HHHHHcCCEEEEECCCccc-ccCCch---hhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHH-------Hhhcc
Confidence 9999999999999999833 333221 2343333447889999866787 88888988765 4442 2233
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-----CC---------cee-EEEeeeeeEEEEEcc
Q 010250 376 FTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SP---------IIG-EIRGTGLILGTEFAD 440 (514)
Q Consensus 376 ~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~---------~~~-~v~g~g~~~~i~~~~ 440 (514)
.+...+|++++++.++++.+. ...++..++.+.+.+.|+++.. ++ +.. ..++.|.++.+.+..
T Consensus 243 ~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 320 (398)
T 1gc0_A 243 TGAVLSPHDAALLMRGIKTLN--LRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG 320 (398)
T ss_dssp TCCCCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETT
T ss_pred CCCCCCHHHHHHHHhccchHH--HHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC
Confidence 345678999888888887543 2344555556666666654310 01 000 013567788887752
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHCCcEEEe---e----------------------------CCEEEEeCCCCCCHHHH
Q 010250 441 NKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV---S----------------------------GDNIMMSPPFIMSPEEV 489 (514)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~---~----------------------------g~~iRi~p~~~~t~e~i 489 (514)
. .......+.+.|+.... + .+.|||++++..++++|
T Consensus 321 ~-------------~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i 387 (398)
T 1gc0_A 321 G-------------IGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLL 387 (398)
T ss_dssp H-------------HHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHH
T ss_pred C-------------HHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHH
Confidence 1 12344566677776643 1 25799999999999999
Q ss_pred HHHHHHHHHH
Q 010250 490 DELISKYGKA 499 (514)
Q Consensus 490 d~~~~~l~~~ 499 (514)
+.+.++|+++
T Consensus 388 ~~l~~al~~~ 397 (398)
T 1gc0_A 388 ADVQQALKAS 397 (398)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9998888764
No 159
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.3e-21 Score=207.36 Aligned_cols=334 Identities=14% Similarity=0.086 Sum_probs=206.3
Q ss_pred CCCHHHHHHHHHHHhcCCccccc----cccCCchHHHHHHHHHHhcCcC-CCCeEEEeCChhHHHHHHHHHHHHHHhhcC
Q 010250 116 GSEPRLVAAATAQLNTLPFYHSF----WNRTTKPSLDLAKELLEMFTAS-KMAKVFFTNSGSEANDTQVKLVWYYNNALG 190 (514)
Q Consensus 116 h~~p~v~~A~~~~l~~~~~~~~~----~~~~~~~~~ela~~L~~~~~~~-~~~~v~~~~sGseA~~~Alk~a~~~~~~~~ 190 (514)
++++.+.+++.+++......+.+ +.+......+++++++++++.. +.+.+++++||++|+..+++.++.+.....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~ 154 (497)
T 3mc6_A 75 HGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHR 154 (497)
T ss_dssp CCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHS
T ss_pred CCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcC
Confidence 35689999999988764322111 1112344456777788887533 356899999999999999999876533211
Q ss_pred CCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC-cccCCCCCCChhHHHHHHHHHHHHHHHHhCC
Q 010250 191 RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGETEEEYSTRLANNLEDLILKEGP 269 (514)
Q Consensus 191 ~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~le~li~~~~~ 269 (514)
...+++|++..++|.. ...+....|... ..+++.. .++. ++++|++++.
T Consensus 155 g~~~~~Vi~~~~~h~~-~~~~~~~~G~~~------------~~v~~~~~~~~~-------------d~~~l~~~i~---- 204 (497)
T 3mc6_A 155 GITEPEIIAPVTAHAG-FDKAAYYFGMKL------------RHVELDPTTYQV-------------DLGKVKKFIN---- 204 (497)
T ss_dssp CCSSCEEEEETTSCHH-HHHHHHHSCCEE------------EEECBCTTTCSB-------------CTTTTGGGCC----
T ss_pred CCCCceEEEeCCccHH-HHHHHHHcCCeE------------EEEecCcccCcC-------------CHHHHHHHHh----
Confidence 1123567776665544 333333333211 1112111 1111 1245555553
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc-----c--c--cceecccCCCCchhc--h
Q 010250 270 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL-----G--T--MFGCDKYSIKPDLVS--F 338 (514)
Q Consensus 270 ~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~-----G--~--~~~~~~~gv~pDiv~--~ 338 (514)
+++++|+++..++.+|.+.+ +++|+++|++||++||+||+|+|+.+. | . .+.....|+ |+++ +
T Consensus 205 ~~~~~v~~~~p~nptG~~~~----l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~--d~~~~s~ 278 (497)
T 3mc6_A 205 KNTVLLVGSAPNFPHGIADD----IEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGV--TSISCDT 278 (497)
T ss_dssp SSEEEEEEETTCTTTCCCCS----CTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTC--CEEEEET
T ss_pred hCCEEEEEECCCCCCCcCCC----HHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCC--cEEEECc
Confidence 46889999999988998876 899999999999999999999876442 1 1 122233343 6665 4
Q ss_pred hhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccC-----CC--CCcHHHHHHHHHHHHHHhh---ccHHHHHHHHH
Q 010250 339 AKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF-----TY--SGHPVSCAVAIEALKIYKE---RNIVEQVNKIA 408 (514)
Q Consensus 339 sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~-----t~--~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~ 408 (514)
.|.+.+| .++|+++++++.+....... .....++ ++ +.+....++..++++.+.+ +++.+++.++.
T Consensus 279 ~K~l~~~-~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~ 354 (497)
T 3mc6_A 279 HKYGFAP-KGSSVIMYRNSDLRMHQYYV---NPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAA 354 (497)
T ss_dssp TTTTCCC-SSCEEEECSSHHHHTTTSCC---BTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcCCC-CCceeEEecCHHHHhhhhcc---cccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 5887666 78999999877655432110 0001111 11 1122233444455555544 34567788888
Q ss_pred HHHHhhhhh-ccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--CEEEEeCCCCCC
Q 010250 409 PKFQDGVKA-FSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIMMSPPFIMS 485 (514)
Q Consensus 409 ~~l~~~L~~-l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--~~iRi~p~~~~t 485 (514)
+++++.|++ +.+..++.. ..+.++.+..... ....+.+.|.++||.+.... ..+|++++ .+|
T Consensus 355 ~~l~~~L~~~~~g~~~~~~--~~~~~v~~~~~~~------------~~~~l~~~L~~~Gi~v~~~~~~~~~ri~~~-~~t 419 (497)
T 3mc6_A 355 MKFKKYIQENIPDLDIMGN--PRYSVISFSSKTL------------NIHELSDRLSKKGWHFNALQKPVALHMAFT-RLS 419 (497)
T ss_dssp HHHHHHHHHSCTTCEECSC--CCSSEEEEECTTT------------THHHHHHHHHTTTCBCEECCSSCCEEEECC-TTT
T ss_pred HHHHHHHHhcCCCEEEecC--CCeeEEEEeCCCC------------CHHHHHHHHHhCCEEEecCCCCCeEEEEEe-CCC
Confidence 999999987 433322221 3344555543211 14568899999999887643 45899988 789
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 010250 486 PEEVDELISKYGKALKATE 504 (514)
Q Consensus 486 ~e~id~~~~~l~~~l~~~~ 504 (514)
++++++++++|+++++++.
T Consensus 420 ~e~i~~~~~~L~~~l~~~~ 438 (497)
T 3mc6_A 420 AHVVDEICDILRTTVQELK 438 (497)
T ss_dssp TCTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998764
No 160
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.87 E-value=4.8e-21 Score=196.76 Aligned_cols=281 Identities=13% Similarity=0.106 Sum_probs=185.4
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 221 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~ 221 (514)
..+...+++++|+++++ .+++++++||++|++.+++.+. ..+++||+.++.||+.........
T Consensus 64 ~~~~~~~l~~~la~~~g---~~~~~~~~sGt~A~~~al~~~~--------~~gd~Vi~~~~~y~~~~~~~~~~~------ 126 (392)
T 3qhx_A 64 GNPTRTALEAALAAVED---AAFGRAFSSGMAAADCALRAML--------RPGDHVVIPDDAYGGTFRLIDKVF------ 126 (392)
T ss_dssp CCHHHHHHHHHHHHHTT---CSEEEEESSHHHHHHHHHHHHC--------CTTCEEEEETTCCHHHHHHHHHTG------
T ss_pred CChHHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEeCCCcchHHHHHHHHH------
Confidence 45567789999999873 4589999999999999999763 345789999999987532211000
Q ss_pred CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250 222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 301 (514)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~ 301 (514)
..++ ..+..++.. +++++++.+. +++++|++|++++++|.+.+ +++|+++|
T Consensus 127 ~~~g---~~~~~v~~~------------------d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----l~~i~~la 177 (392)
T 3qhx_A 127 TGWN---VEYTPVALA------------------DLDAVRAAIR----PTTRLIWVETPTNPLLSIAD----IAGIAQLG 177 (392)
T ss_dssp GGGT---CEEEEECTT------------------CHHHHHHHCC----TTEEEEEEESSCTTTCCCCC----HHHHHHHH
T ss_pred HhcC---cEEEEeCCC------------------CHHHHHHhhC----CCCeEEEEECCCCCCcEEec----HHHHHHHH
Confidence 0001 001111111 1466776664 47899999999999999877 99999999
Q ss_pred HhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCc-ccceeEEeC-HHHHHHhhhccCCCCcccccCC
Q 010250 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAY-MPIGAILVS-PEVSEVIHSQSNTLGSFSHGFT 377 (514)
Q Consensus 302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~-~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t 377 (514)
++||+++|+||+|+.+ . .....+..+|+++ ++|.+++++ .++|+++++ +++++.+.. ..+..+
T Consensus 178 ~~~g~~li~D~~~~~~-~-----~~~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~-------~~~~~g 244 (392)
T 3qhx_A 178 ADSSAKVLVDNTFASP-A-----LQQPLSLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAF-------LQNGAG 244 (392)
T ss_dssp HHHTCEEEEECTTTCT-T-----TCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHH-------HHHHHC
T ss_pred HHcCCEEEEECCCccc-c-----cCChHHhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHH-------HHHhcC
Confidence 9999999999999732 1 2233345678886 889999854 578888887 688877763 233456
Q ss_pred CCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEE------------------EeeeeeEEEEEc
Q 010250 378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI------------------RGTGLILGTEFA 439 (514)
Q Consensus 378 ~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v------------------~g~g~~~~i~~~ 439 (514)
+..+|+.+++++..++.+.. ..++..++.+.+.+.|++. +.+..+ +|.|.++++++.
T Consensus 245 ~~~~~~~~~~~~~~l~~l~~--~~~~~~~~~~~l~~~L~~~---~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~ 319 (392)
T 3qhx_A 245 AVPGPFDAYLTMRGLKTLVL--RMQRHSENAAAVAEFLAEH---PAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMR 319 (392)
T ss_dssp CCCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHTC---TTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEET
T ss_pred CCCCHHHHHHHHhhhhHHHH--HHHHHHHHHHHHHHHHhcC---CCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeC
Confidence 77789998888887775532 2455666666676666653 222222 567889999996
Q ss_pred cCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------------------------CCEEEEeCCCCCCHHHHHHHHH
Q 010250 440 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------------------------GDNIMMSPPFIMSPEEVDELIS 494 (514)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------------------------g~~iRi~p~~~~t~e~id~~~~ 494 (514)
... ..+..+...|...|+.+..+ .+.|||+.....++++|+.+.+
T Consensus 320 ~~~----------~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~~~i~~l~~ 389 (392)
T 3qhx_A 320 AGR----------TAAEQLCAKTNIFILAESLGSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIEDVADLLDDLKQ 389 (392)
T ss_dssp TCH----------HHHHHHHHHCSSSEECSCCCCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCSSCHHHHHHHHHH
T ss_pred CcH----------HHHHHHHHhCCCceECCCCCCCCceeeCcccccccccCHHHcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 421 02444555555444433211 2458998666555555555544
Q ss_pred HH
Q 010250 495 KY 496 (514)
Q Consensus 495 ~l 496 (514)
+|
T Consensus 390 al 391 (392)
T 3qhx_A 390 AL 391 (392)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 161
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.87 E-value=2.2e-20 Score=188.09 Aligned_cols=331 Identities=14% Similarity=0.080 Sum_probs=204.9
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV 179 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al 179 (514)
.++|||.++.. .. .+|++++++.+..... . . .++.+...+++++|+++++ .+.+++++||++|+..++
T Consensus 3 ~~~i~~~~~~~---~~-p~~~~~~a~~~~~~~~-~---~-y~~~~~~~~l~~~la~~~g---~~~~~~~~~gt~a~~~~~ 70 (347)
T 1jg8_A 3 HMMIDLRSDTV---TK-PTEEMRKAMAQAEVGD-D---V-YGEDPTINELERLAAETFG---KEAALFVPSGTMGNQVSI 70 (347)
T ss_dssp --CEECSCGGG---CC-CCHHHHHHHHTCCCCC-G---G-GTCCHHHHHHHHHHHHHHT---CSEEEEESCHHHHHHHHH
T ss_pred ceEEEeccccC---CC-CCHHHHHHHhcCCCCC-c---c-cCCChHHHHHHHHHHHHhC---CceEEEecCcHHHHHHHH
Confidence 45789888743 33 5688888886543211 1 1 1234556789999999873 468899999999999998
Q ss_pred HHHHHHHhhcCCCCccEEEEEecCCcccce-e-eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250 180 KLVWYYNNALGRPNKKKFIARQKSYHGSTL-I-AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257 (514)
Q Consensus 180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~-~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
+... ..+++|++.+++|..... . .....|.... .+ .+..+. .++
T Consensus 71 ~~~~--------~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~------------~v-~~~~~~-------------~d~ 116 (347)
T 1jg8_A 71 MAHT--------QRGDEVILEADSHIFWYEVGAMAVLSGVMPH------------PV-PGKNGA-------------MDP 116 (347)
T ss_dssp HHHC--------CTTCEEEEETTCHHHHSSTTHHHHHTCCEEE------------EE-CEETTE-------------ECH
T ss_pred HHhc--------CCCCEEEEcCcchhhhccccchhhccCeEEE------------Ee-cCCCCc-------------cCH
Confidence 7653 234678887777643211 0 1111121110 01 000000 014
Q ss_pred HHHHHHHHHhC--CCcEEEEEEccccCCC-CcccCChhHHHHHHHHHHhcCCEEEEechhcCccc---ccccceecccCC
Q 010250 258 NNLEDLILKEG--PETIAAFIAEPVIGAG-GVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR---LGTMFGCDKYSI 331 (514)
Q Consensus 258 ~~le~li~~~~--~~~~aavivEpv~~~~-G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr---~G~~~~~~~~gv 331 (514)
++|++.+.... .+++++|+++++++++ |.+. +.+.+++|.++|++||+++|+||+|. ++. .|. ....+..
T Consensus 117 ~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~-~~~~l~~i~~~a~~~~~~li~D~a~~-~~~~~~~~~--~~~~~~~ 192 (347)
T 1jg8_A 117 DDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVV-PLENIKEICTIAKEHGINVHIDGARI-FNASIASGV--PVKEYAG 192 (347)
T ss_dssp HHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCC-CHHHHHHHHHHHHHHTCEEEEEETTH-HHHHHHHCC--CHHHHHH
T ss_pred HHHHHHhccccccccCceEEEEeccccccCCccC-cHHHHHHHHHHHHHCCCEEEeehhhh-hcchhhcCC--ChHHhcc
Confidence 67777664210 1257889999888877 7554 56789999999999999999999875 321 121 1111111
Q ss_pred CCch--hchhhhhcCCccccee-EEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHH
Q 010250 332 KPDL--VSFAKALSSAYMPIGA-ILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIA 408 (514)
Q Consensus 332 ~pDi--v~~sK~l~gG~~pig~-v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~ 408 (514)
..|. ++++|++++ |+|+ +++++++++.+.... . ..++++..+++.++++..+++... +. .++..++.
T Consensus 193 ~~d~~~~s~sK~l~~---~~G~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~l~~~~-~~-~~~~~~~~ 262 (347)
T 1jg8_A 193 YADSVMFCLSKGLCA---PVGSVVVGDRDFIERARKAR----K-MLGGGMRQAGVLAAAGIIALTKMV-DR-LKEDHENA 262 (347)
T ss_dssp TCSEEEEESSSTTCC---SSCEEEEECHHHHHHHHHHH----H-HHTCCCSSTHHHHHHHHHHHHHSS-TT-HHHHHHHH
T ss_pred cccEEEEecccccCC---CceEEEEcCHHHHHHHHHHH----H-HcCCchhHHHHHHHHHHHHHHHHH-HH-HHHHHHHH
Confidence 2343 368999975 4674 567888877664310 1 223444556677777777776532 22 34445567
Q ss_pred HHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHH
Q 010250 409 PKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPE 487 (514)
Q Consensus 409 ~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e 487 (514)
+++.+.|+++ ...+.. ....|.++.+.+..... ....+.+.|.++||.+.+.+ +.+|++++..+|++
T Consensus 263 ~~l~~~L~~~-~~~~~~-~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~gi~v~~~~~~~iRl~~~~~~~~e 330 (347)
T 1jg8_A 263 RFLALKLKEI-GYSVNP-EDVKTNMVILRTDNLKV----------NAHGFIEALRNSGVLANAVSDTEIRLVTHKDVSRN 330 (347)
T ss_dssp HHHHHHHHHH-TCBCCG-GGCCSSEEEEECTTSSS----------CHHHHHHHHHHHTEECEEEETTEEEEECCTTSCHH
T ss_pred HHHHHHHHhc-Cceecc-CCCcceEEEEEcccccC----------CHHHHHHHHHHCCCEEecCCCCeEEEEeCCCCCHH
Confidence 8888888776 322111 12245566777642110 14568888999999998764 57999998889999
Q ss_pred HHHHHHHHHHHHHHH
Q 010250 488 EVDELISKYGKALKA 502 (514)
Q Consensus 488 ~id~~~~~l~~~l~~ 502 (514)
|+++++++|++++++
T Consensus 331 ~i~~~~~~l~~~l~~ 345 (347)
T 1jg8_A 331 DIEEALNIFEKLFRK 345 (347)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988764
No 162
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.87 E-value=4.4e-22 Score=212.50 Aligned_cols=370 Identities=14% Similarity=0.046 Sum_probs=206.7
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC----cCCCCeEEEeCChhHH
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT----ASKMAKVFFTNSGSEA 174 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~----~~~~~~v~~~~sGseA 174 (514)
|.+|++...+++....++.+|++++++.+++....++.. ..+..+....+++.+.+.+. ..+.+++++++||++|
T Consensus 98 g~~~~~~~i~l~~g~~~~~~~~~v~a~~~~~~~~~y~~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~a 176 (533)
T 3f6t_A 98 EDKFLIDAVNYCHTELGLNRDKVVAEWVNGAVANNYPVP-DRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAA 176 (533)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHTCSCCSS-SSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHH
T ss_pred cccccHhheeccCCCCCcCCcHHHHHHHHHHHhCCCCCC-cccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHH
Confidence 444444444444456667789999999888865322211 12234455556666644411 1123689999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC----CcccCCCCCCChh
Q 010250 175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP----HYWRYAHPGETEE 250 (514)
Q Consensus 175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 250 (514)
+..+++...... .. ..+++|++.+++|++........+.... .++++ +.|.
T Consensus 177 l~~~~~~l~~~~--l~-~~gd~Viv~~p~~~~~~~~~~~~g~~~~-------------~v~~~~~~~~~~~--------- 231 (533)
T 3f6t_A 177 IVYAFHSLAENH--LL-KKGDKIAINEPIFTPYLRIPELKDYELV-------------EVDLHSYEKNDWE--------- 231 (533)
T ss_dssp HHHHHHHHHHTT--SS-CTTCEEEEESSCCHHHHTSGGGGGSEEE-------------EECCCEETTTTSE---------
T ss_pred HHHHHHHhhhhh--cc-CCcCEEEEcCCCcHHHHHHHHHcCCeEE-------------EEEecCCcccCCC---------
Confidence 999998632110 01 2346899999999886543322211110 11110 0011
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH-hcCCEEEEechhcCcccccccceeccc
Q 010250 251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK-KYDILFIADEVICAFGRLGTMFGCDKY 329 (514)
Q Consensus 251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~-~~gillI~DEv~tG~gr~G~~~~~~~~ 329 (514)
.+.++|++++. .++.+|+++..++++|.+. +.+.+++|.++|+ +||+++|+||+|.+|...+........
T Consensus 232 ----~d~~~l~~~l~----~~~k~v~l~~p~NPtG~~~-~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~ 302 (533)
T 3f6t_A 232 ----IEPNEIEKLKD----PSIKALIVVNPTNPTSKEF-DTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVP 302 (533)
T ss_dssp ----ECHHHHHHHSC----TTEEEEEEESSCTTTCBCC-CHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSG
T ss_pred ----CCHHHHHHHhC----CCCeEEEEeCCCCCCcccc-CHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCC
Confidence 01466776653 3566666655566677655 5678999999999 699999999999988654322211112
Q ss_pred CCCCchhchhhhhcCCcccceeEEeCHH-----HHHHhhh---------cc---C-------------CCCcccccCCCC
Q 010250 330 SIKPDLVSFAKALSSAYMPIGAILVSPE-----VSEVIHS---------QS---N-------------TLGSFSHGFTYS 379 (514)
Q Consensus 330 gv~pDiv~~sK~l~gG~~pig~v~~~~~-----i~~~l~~---------~~---~-------------~~~~~~~~~t~~ 379 (514)
+....+.+|||.++..++++|+++++++ +++.+.+ .+ . .........+.+
T Consensus 303 ~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~ 382 (533)
T 3f6t_A 303 YNTMLVYSYSKLFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAG 382 (533)
T ss_dssp GGEEEEEESHHHHTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCS
T ss_pred CCEEEEecCcccCCCcccceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccC
Confidence 2223455899998743389999999776 4332200 00 0 000112223445
Q ss_pred CcHHHHHH-HHHHHHHHh-----------hccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCC--C
Q 010250 380 GHPVSCAV-AIEALKIYK-----------ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSP--N 445 (514)
Q Consensus 380 ~~pl~~aa-a~aal~~~~-----------~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~--~ 445 (514)
.++.++++ ++.++..+. .+.+.+.++++.+.+.+.|. + ++......-|.+..+.+...... .
T Consensus 383 ~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~---~~~~~~~~~g~~~~~~l~~~~~~~~g 458 (533)
T 3f6t_A 383 LSTPQQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-A---PKDETDTNTHYYSLIDIYRLAEKIYG 458 (533)
T ss_dssp CCHHHHHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-C---CCCCSTTBCCSEEEEEHHHHHHHHHC
T ss_pred CChHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-C---CccccCCCceEEEEEehHhhhhhccc
Confidence 55555554 222333332 12346667777778888775 4 21111122345555655420000 0
Q ss_pred CCCC----CccchHHHHHHHHHHCCcEEEee------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 010250 446 EPFP----PEWGIGAYFGAQCEKHGMLVRVS------GDNIMMSPPFIMSPEEVDELISKYGKALKATEERVK 508 (514)
Q Consensus 446 ~~~~----~~~~~~~~~~~~l~~~Gv~~~~~------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~~ 508 (514)
..+. ......+.+...+.++||++.++ .+.|||+. ..+++++|++++++|.++++++.++.+
T Consensus 459 ~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~-a~~~~e~i~~~i~~L~~~l~~~~~~~~ 530 (533)
T 3f6t_A 459 KEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQ-ANLPTEDYALIGKQVLELLKEYYEEFK 530 (533)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEES-SSSCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHhhccCCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEE-eeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 00001222334445789998763 35799995 236999999999999999988766543
No 163
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.87 E-value=1.7e-20 Score=194.06 Aligned_cols=330 Identities=15% Similarity=0.110 Sum_probs=190.6
Q ss_pred EEEccCCcccccCCCCCHHHHHHHHHHHh-cCCccc---ccccc--CCchHHHHH-HHHHHhcCcCCCCeE-EEeCChhH
Q 010250 102 YLDSLAGLWCTALGGSEPRLVAAATAQLN-TLPFYH---SFWNR--TTKPSLDLA-KELLEMFTASKMAKV-FFTNSGSE 173 (514)
Q Consensus 102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~-~~~~~~---~~~~~--~~~~~~ela-~~L~~~~~~~~~~~v-~~~~sGse 173 (514)
.+++.++ .+. .+|+|++|+.+++. .....+ .++.+ ..+...+++ +++++.+ +.+.+ ++++||++
T Consensus 34 ~i~l~~~---~~~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~---~~~~~~v~~~~Gs~ 105 (425)
T 3ecd_A 34 QVELIAS---ENI--VSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLF---NAGHANVQPHSGAQ 105 (425)
T ss_dssp SEECCTT---CCC--CCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHH---TCSEEECCCSSHHH
T ss_pred ceeeecc---cCC--CCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHh---CCCCceeecCchHH
Confidence 4666555 222 39999999999884 322111 11111 123456666 6666766 34455 45999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCccEEEEEecCCccc-ceeeee-cCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChh
Q 010250 174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGS-TLIAAS-LSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEE 250 (514)
Q Consensus 174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~-t~~~~~-~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 250 (514)
|++.+++.+. .++++|++.+++|++. ..+... ..+... . ...++.. +.+.
T Consensus 106 a~~~al~~~~--------~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~-~---------~~~~~~~~~~~~--------- 158 (425)
T 3ecd_A 106 ANGAVMLALA--------KPGDTVLGMSLDAGGHLTHGAKPALSGKWF-N---------ALQYGVSRDTML--------- 158 (425)
T ss_dssp HHHHHHHHHC--------CTTCEEEEECC------------------C-E---------EEEECCCTTTSS---------
T ss_pred HHHHHHHHcc--------CCCCEEEEcccccccceecchhhhhcccce-e---------eeecCCCcccCc---------
Confidence 9999998773 3457899999999883 222211 111100 0 0001110 0011
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEEc-cccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-Ccccccccceecc
Q 010250 251 EYSTRLANNLEDLILKEGPETIAAFIAE-PVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDK 328 (514)
Q Consensus 251 ~~~~~~~~~le~li~~~~~~~~aavivE-pv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~ 328 (514)
.++++|++++.+. ++++|+++ |.++ .. ..+++|+++|++||+++|+||+|. |+.+.|......
T Consensus 159 ----~d~~~l~~~i~~~---~~~~v~~~~~~~~---~~----~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~- 223 (425)
T 3ecd_A 159 ----IDYDQVEALAQQH---KPSLIIAGFSAYP---RK----LDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPV- 223 (425)
T ss_dssp ----CCHHHHHHHHHHH---CCSEEEEECSCCC---SC----CCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGG-
T ss_pred ----cCHHHHHHHHhhc---CCcEEEEccccCC---Cc----CCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCch-
Confidence 1257888887643 34566666 5543 23 338999999999999999999964 554444432211
Q ss_pred cCCCCchh--chhhhhcCCcccceeEEeC-HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH-Hhh--ccHHH
Q 010250 329 YSIKPDLV--SFAKALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI-YKE--RNIVE 402 (514)
Q Consensus 329 ~gv~pDiv--~~sK~l~gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~-~~~--~~~~~ 402 (514)
. .+|++ +++|+++| .++|+++++ +++.+.+... ..++.+.+.++..++++.+++.. +++ +++.+
T Consensus 224 -~-~~di~~~s~sK~l~g--~~~g~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~ 293 (425)
T 3ecd_A 224 -E-HAHVVTSTTHKTLRG--PRGGFVLTNDEEIAKKINSA------VFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYID 293 (425)
T ss_dssp -G-TCSEEEEESSGGGCC--CSCEEEEESCHHHHHHHHHH------HC-----CCCHHHHHHHHHHHHHHTSHHHHHHHH
T ss_pred -h-cCcEEEecCCcccCC--CCcEEEEeCCHHHHHHHHhh------hCccccCCccHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 1 15776 46699965 578999987 5677766531 12222223334333434444433 322 35778
Q ss_pred HHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE----ee------
Q 010250 403 QVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----VS------ 472 (514)
Q Consensus 403 ~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~------ 472 (514)
+++++++++++.|++. ...+... .+.+.++.+.+..... ....+.+.|.++||++. +.
T Consensus 294 ~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~gi~v~~~~~p~~~~~~~ 361 (425)
T 3ecd_A 294 RVLANAQALGDVLKAG-GVDLVTG-GTDNHLLLVDLRPKGL----------KGAQVEQALERAGITCNKNGIPFDPEKPT 361 (425)
T ss_dssp HHHHHHHHHHHHHHHT-TCEEGGG-SCSSSEEEEECGGGTC----------CHHHHHHHHHHTTEECEECCCTTCSSCTT
T ss_pred HHHHHHHHHHHHHHhC-CCeeccC-CCCceEEEEEeCCCCC----------CHHHHHHHHHHcCCEecccccCCCCCCCC
Confidence 8899999999999874 2211110 1345667777653221 14557788889999998 32
Q ss_pred -CCEEEEeCCCCC----CHHHHHHHHHHHHHHHHHH
Q 010250 473 -GDNIMMSPPFIM----SPEEVDELISKYGKALKAT 503 (514)
Q Consensus 473 -g~~iRi~p~~~~----t~e~id~~~~~l~~~l~~~ 503 (514)
.+.+|++++... ++++|++++++|++++++.
T Consensus 362 ~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 362 ITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp TCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CccceeccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence 136999976554 4999999999999998765
No 164
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.86 E-value=1.4e-20 Score=199.45 Aligned_cols=359 Identities=14% Similarity=0.133 Sum_probs=208.9
Q ss_pred CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccc---cCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250 97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWN---RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE 173 (514)
Q Consensus 97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~---~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse 173 (514)
..+..|+|+..+ ++.+|.+++++...+-+.. .+. +. .......++.++|+++++....+.++|++||++
T Consensus 98 ~~~~~yl~~~~~------~~~~~~v~~~~~~~~~n~~-~~~-~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~ 169 (497)
T 2qma_A 98 TQHPDCIAHLHT------PPLMPAVAAEAMIAALNQS-MDS-WDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQ 169 (497)
T ss_dssp TTSTTBCSSSCC------CCBHHHHHHHHHHHHHCCC-TTC-GGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHH
T ss_pred CCCCCeeEeCCC------CCcHHHHHHHHHHHhhccc-ccc-hhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchH
Confidence 355678887655 4468888888866553321 111 11 012223344556888874332378999999999
Q ss_pred HHHHHHHHHHHHHh---------hcCCCC--ccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccC
Q 010250 174 ANDTQVKLVWYYNN---------ALGRPN--KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRY 242 (514)
Q Consensus 174 A~~~Alk~a~~~~~---------~~~~~~--~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (514)
|+..|++.+|.+.. ..|.+. ++..|+.+...|.+...+....+... ..+..++....++.
T Consensus 170 a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~---------~~v~~v~~~~~~~~ 240 (497)
T 2qma_A 170 SNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGE---------KAVMTVDANADGTM 240 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCG---------GGEEEECBCTTSSB
T ss_pred HHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCc---------ccEEEEecCCCCcC
Confidence 99999999865422 112111 23244445555655433333322100 01122222211111
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhC--CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250 243 AHPGETEEEYSTRLANNLEDLILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 320 (514)
Q Consensus 243 ~~~~~~~~~~~~~~~~~le~li~~~~--~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~ 320 (514)
++++|++.+.+.. ...+.+|++...++.+|.+.| +++|.++|++||+++|+|++|+|+...
T Consensus 241 -------------d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~----l~~I~~l~~~~~~~l~vD~a~~~~~~~ 303 (497)
T 2qma_A 241 -------------DITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDD----LDFIADMAVKHDMWMHVDGAYGGALIL 303 (497)
T ss_dssp -------------CGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEEETTGGGGGG
T ss_pred -------------CHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCC----HHHHHHHHHHcCCEEEEehhhhHHHHh
Confidence 1466777775431 112457777766777788766 999999999999999999999987655
Q ss_pred cccceecccCC-CCchhch--hhhhcCCcccceeEEeCHH-HHHHhhhccCCCCccc-ccCCCCCcHHHH----------
Q 010250 321 GTMFGCDKYSI-KPDLVSF--AKALSSAYMPIGAILVSPE-VSEVIHSQSNTLGSFS-HGFTYSGHPVSC---------- 385 (514)
Q Consensus 321 G~~~~~~~~gv-~pDiv~~--sK~l~gG~~pig~v~~~~~-i~~~l~~~~~~~~~~~-~~~t~~~~pl~~---------- 385 (514)
.. +.....++ .+|++++ +|+++++ +++|+++++++ .++.+.... .+. .+.+...++..+
T Consensus 304 ~~-~~~~~~gi~~~D~i~~s~hK~l~~p-~~~G~l~~~~~~~~~~~~~~~----~yl~~~~~~~~~~~~~~~~~~r~~~a 377 (497)
T 2qma_A 304 SS-HKSRLKGVERAHSISVDFHKLFYQT-ISCGALLVNDKSNFKFLLHHA----DYLNREHDELPNLVDKSIATTKRFDA 377 (497)
T ss_dssp ST-TGGGGTTGGGCSEEEEETTTTTCCC-SSCEEEEESCGGGGGGGCC------------------------CCSCCCTH
T ss_pred Cc-chHhhcCcccCCEEEEcchhccCCC-cceEEEEEeCHHHHHHhcCCc----hhcCCccccCCCccccCCCCCCchhH
Confidence 44 33334566 6898876 7999888 69999998754 344432110 111 111111222211
Q ss_pred HHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH
Q 010250 386 AVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC 462 (514)
Q Consensus 386 aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 462 (514)
.+..++++.+.. +++.++..++++++.+.|+++....++. ...+.++.+.+.+... ........+...|
T Consensus 378 l~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~--~~~~~~v~f~~~~~~~------~~~~l~~~l~~~l 449 (497)
T 2qma_A 378 LKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFELLA--EPSLSTVLFRATHETA------DLDELNKALRLEA 449 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECS--CCSSSEEEEEECCSSS------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEc--CCCceEEEEEEcCCcc------CHHHHHHHHHHHH
Confidence 122334554433 2467788889999999998753222211 2234567777653211 0111244577888
Q ss_pred HHCCcEEEee----C-CEEEEeC-CCCCCHHHHHHHHHHHHHHHHHH
Q 010250 463 EKHGMLVRVS----G-DNIMMSP-PFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 463 ~~~Gv~~~~~----g-~~iRi~p-~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
.++|+++.+. + ..+|+++ +..+|++||++++++|+++++++
T Consensus 450 ~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 496 (497)
T 2qma_A 450 LTRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINMLAVEL 496 (497)
T ss_dssp HHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred HhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 8999887642 2 3699997 78899999999999999887653
No 165
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.86 E-value=1.3e-21 Score=199.08 Aligned_cols=309 Identities=14% Similarity=0.144 Sum_probs=194.5
Q ss_pred HHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEE
Q 010250 121 LVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIAR 200 (514)
Q Consensus 121 v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~ 200 (514)
+.+++.+.+....+ .+.+...++++.++++++ .+++++++||++|++.+++.+. . ..+++|++.
T Consensus 21 ~~~~~~~~~~~~~~------~~~~~~~~l~~~la~~~~---~~~~~~~~~gt~a~~~~~~~~~------~-~~gd~v~~~ 84 (374)
T 3uwc_A 21 YLNDLREFIKTADF------TLGAELEKFEKRFAALHN---APHAIGVGTGTDALAMSFKMLN------I-GAGDEVITC 84 (374)
T ss_dssp HHHHHHHHHHHTCC------SSCHHHHHHHHHHHHHTT---CSEEEEESCHHHHHHHHHHHTT------C-CTTCEEEEE
T ss_pred HHHHHHHHHHcCCc------ccChhHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHcC------C-CCCCEEEEC
Confidence 66666666654321 245667899999999983 4589999999999999998761 1 345789999
Q ss_pred ecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccc
Q 010250 201 QKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPV 280 (514)
Q Consensus 201 ~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv 280 (514)
+++||+....... .|... ..++....+.. +++++++.+. +++++|+ |.
T Consensus 85 ~~~~~~~~~~~~~-~g~~~------------~~~~~~~~~~~-------------d~~~l~~~~~----~~~~~v~--~~ 132 (374)
T 3uwc_A 85 ANTFIASVGAIVQ-AGATP------------VLVDSENGYVI-------------DPEKIEAAIT----DKTKAIM--PV 132 (374)
T ss_dssp SSSCHHHHHHHHH-TTCEE------------EEECBCTTSSB-------------CGGGTGGGCC----TTEEEEC--CB
T ss_pred CCccHHHHHHHHH-cCCEE------------EEEecCCCCCc-------------CHHHHHHhCC----CCceEEE--Ee
Confidence 9999887533322 22111 01111111110 1244555443 3566666 44
Q ss_pred cCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh----hhhcC-CcccceeEEeC
Q 010250 281 IGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA----KALSS-AYMPIGAILVS 355 (514)
Q Consensus 281 ~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s----K~l~g-G~~pig~v~~~ 355 (514)
+.+|.+.+ +++|.++|++||+++|+||+|+.+.. +.....+..+|++++| |++++ | . .|+++++
T Consensus 133 -n~~G~~~~----~~~i~~~~~~~~~~li~D~~~~~g~~----~~~~~~~~~~d~~~~s~~~~K~l~~~g-~-~g~~~~~ 201 (374)
T 3uwc_A 133 -HYTGNIAD----MPALAKIAKKHNLHIVEDACQTILGR----INDKFVGSWGQFACFSLHPLKNLNVWS-D-AGVIITH 201 (374)
T ss_dssp -CGGGCCCC----HHHHHHHHHHTTCEEEEECTTCTTCE----ETTEETTSSSSEEEEECSSSSSSCCSS-C-CEEEEES
T ss_pred -CCcCCcCC----HHHHHHHHHHcCCEEEEeCCCccCce----eCCeeccccccEEEEeCCCCCcCCccc-e-eEEEEeC
Confidence 45677665 99999999999999999999983211 2234445557998877 99987 5 2 6777765
Q ss_pred -HHHHHHhhhccCCCC--cc---cccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-CCceeEEE
Q 010250 356 -PEVSEVIHSQSNTLG--SF---SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-SPIIGEIR 428 (514)
Q Consensus 356 -~~i~~~l~~~~~~~~--~~---~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-~~~~~~v~ 428 (514)
+++.+.+........ .+ ..+.++..+++.++++...++.+ +++.++.+++.+++++.|+++.. ..+.....
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 279 (374)
T 3uwc_A 202 SDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLMNQL--ETITEKRRGIAHLYDQSFVDLSEFIDVPVRRE 279 (374)
T ss_dssp CHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHGGGH--HHHHHHHHHHHHHHHHHTGGGTTTEECCCCCT
T ss_pred CHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccCCCeEEeccCCC
Confidence 466666553211000 01 12334455677777766655544 34678888888999998887632 11111100
Q ss_pred -eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC----------------------------CEEEEe
Q 010250 429 -GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG----------------------------DNIMMS 479 (514)
Q Consensus 429 -g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g----------------------------~~iRi~ 479 (514)
+...+..+.+... ....+.+.|.++||.+++.. +.||++
T Consensus 280 ~~~~~~~~~~~~~~------------~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~ 347 (374)
T 3uwc_A 280 GVYHVFHIYVLRVK------------YRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLP 347 (374)
T ss_dssp TEECCCSSEEEEET------------THHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEEC
T ss_pred CCceeeEEEEEEcC------------CHHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEcc
Confidence 1111111211111 14568889999999987653 569999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHH
Q 010250 480 PPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 480 p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
++..+|++||++++++|++++++
T Consensus 348 ~~~~~t~edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 348 AHPYLTEEEINYIIKKVREFYLE 370 (374)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998864
No 166
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.86 E-value=3.3e-21 Score=194.94 Aligned_cols=328 Identities=13% Similarity=0.089 Sum_probs=199.4
Q ss_pred CEEEE-ccCCcccccCCC-CCHHHHHHHHHHHhcCC--ccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHH
Q 010250 100 KKYLD-SLAGLWCTALGG-SEPRLVAAATAQLNTLP--FYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAN 175 (514)
Q Consensus 100 ~~ylD-~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~--~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~ 175 (514)
|+|+| |.++ .+||+ .||.+.+++.++++... .....+ ++.+...+|+++|+++++ .+..++++||++|+
T Consensus 3 ~~~~~~~~~~---~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~y-~~~~~~~~l~~~la~~~~---~~~~i~~~~G~~a~ 75 (357)
T 3lws_A 3 NRLRTSFQQT---TGQISGHGKRNVGVLKTAFAAVADEMASDQY-GTGAIIEPFEQKFADVLG---MDDAVFFPSGTMAQ 75 (357)
T ss_dssp CHHHHHHHTC---SEESSBSSCCBHHHHHHHHTTSCTTCBCEET-TEETTHHHHHHHHHHHHT---CSEEEEESCHHHHH
T ss_pred chhhhHHHhh---cccccCCCCCCHHHHHHHHHHhhcccCcccc-cCChHHHHHHHHHHHHhC---CCcEEEecCcHHHH
Confidence 45666 3333 66776 58888888888877632 111222 234567899999999983 35677889999999
Q ss_pred HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250 176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY 252 (514)
Q Consensus 176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (514)
+.+++.+... +++++|+.++.+|...... ....+... ..++.+ .+.
T Consensus 76 ~~al~~~~~~-------gd~~~vi~~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~-~~~----------- 124 (357)
T 3lws_A 76 QVALRIWSDE-------TDNRTVAYHPLCHLEIHEQDGLKELHPIET------------ILVGAA-DRL----------- 124 (357)
T ss_dssp HHHHHHHHHH-------HTCCEEEECTTCHHHHSSTTHHHHHSSCEE------------EECSCT-TSC-----------
T ss_pred HHHHHHHhhc-------CCCcEEEecccceeeeeccchhhhccCcEE------------EEecCC-CCC-----------
Confidence 9999887532 2222666677776643221 11111111 001100 000
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccccCCC-CcccCChhHHHHHHHHHHhcCCEEEEechhc-----Cccccccccee
Q 010250 253 STRLANNLEDLILKEGPETIAAFIAEPVIGAG-GVIPPPATYFEKVQAVVKKYDILFIADEVIC-----AFGRLGTMFGC 326 (514)
Q Consensus 253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~-G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-----G~gr~G~~~~~ 326 (514)
.++++|+++ ++ +++|++++.++++ |. .++.+++++|.++|++||++||+||+|. ++|+....+.
T Consensus 125 --~d~~~l~~~-----~~-~~~v~~~~p~np~~G~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~- 194 (357)
T 3lws_A 125 --MTLDEIKAL-----PD-IACLLLELPQREIGGV-APAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA- 194 (357)
T ss_dssp --CCHHHHHTC-----CS-CSEEEEESSBGGGTSB-CCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH-
T ss_pred --cCHHHHhcC-----cC-cceEEEEcccccCCce-eCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH-
Confidence 114555544 22 6677888777665 64 5678899999999999999999999875 1222211111
Q ss_pred cccCCCCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHH
Q 010250 327 DKYSIKPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQV 404 (514)
Q Consensus 327 ~~~gv~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~ 404 (514)
...|++ +++|+++|. ..|++++++++++.+.... ....+..+..++. ++++.++|+... +..++.
T Consensus 195 ----~~~d~~~~s~sK~~~~~--~gg~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~l~~~~--~~~~~~ 261 (357)
T 3lws_A 195 ----GLFDSIYISFYKGLGGI--AGAILAGPAAFCQTARIWK----RRYGGDLISLYPY-IVSADYYYELRK--DRMGQY 261 (357)
T ss_dssp ----TTSSEEEEESSSTTCCS--SCEEEEECHHHHHHHHHHH----HHTTCCCSCCHHH-HHHHHHHHHHHT--TCHHHH
T ss_pred ----hcCCEEEEeccccCCCC--ceEEEEcCHHHHHHHHHHH----HHhcCCcccchHH-HHHHHHHHHHHH--HHHHHH
Confidence 123544 789999663 2288889999988875311 1111223333444 344556676532 224456
Q ss_pred HHHHHHHHhhhhhccCCCceeE--EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC----C--EE
Q 010250 405 NKIAPKFQDGVKAFSDSPIIGE--IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG----D--NI 476 (514)
Q Consensus 405 ~~~~~~l~~~L~~l~~~~~~~~--v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g----~--~i 476 (514)
.++++++.+.|+++ +.+.. ....+.++.+++..... .....+.+.|.++||++.++. + .+
T Consensus 262 ~~~~~~l~~~L~~~---~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~ 329 (357)
T 3lws_A 262 YEQAKQLAEQFNAL---PGVHTTPEVPVSNMFHLHFDGQAA---------DISPKLEQVQEETGLGFVGYLVDKDGYCST 329 (357)
T ss_dssp HHHHHHHHHHHHTS---TTEEEESSSCSSSEEEEEEESCHH---------HHHHHHHHHHHHHCEESCSCCEECSSEEEE
T ss_pred HHHHHHHHHHHHhC---CCCeeccCCCcceEEEEEecCChH---------HHHHHHHHHHHhcCeEEecccccCCCceEE
Confidence 77788888888765 22221 12346677777754210 013467788999999988641 2 58
Q ss_pred EEeCC---CCCCHHHHHHHHHHHHHHH
Q 010250 477 MMSPP---FIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 477 Ri~p~---~~~t~e~id~~~~~l~~~l 500 (514)
|++.. +..++++|++++++|.+++
T Consensus 330 r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 330 EISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp EEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred EEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 88754 3468999999999998765
No 167
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.86 E-value=1.3e-20 Score=191.66 Aligned_cols=318 Identities=17% Similarity=0.146 Sum_probs=199.1
Q ss_pred CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccE
Q 010250 117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 196 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ 196 (514)
-+|++++|+.++++....+ +.+...++++.|+++++ .+++++++||++|++.+++.++.+ . .++++
T Consensus 11 ~~~~v~~a~~~~~~~~~~~------~~~~~~~l~~~la~~~~---~~~v~~~~ggt~al~~~~~~~~~~----~-~~gd~ 76 (375)
T 2fnu_A 11 LDKEDKKAVLEVLNSKQLT------QGKRSLLFEEALCEFLG---VKHALVFNSATSALLTLYRNFSEF----S-ADRNE 76 (375)
T ss_dssp CCHHHHHHHHHHHTSSCCS------SSHHHHHHHHHHHHHHT---CSEEEEESCHHHHHHHHHHHSSCC----C-TTSCE
T ss_pred CCHHHHHHHHHHHHcCccc------CChHHHHHHHHHHHHhC---CCeEEEeCCHHHHHHHHHHHhccc----C-CCCCE
Confidence 5899999999999763211 34567889999999983 348999999999999999876210 1 23468
Q ss_pred EEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 010250 197 FIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFI 276 (514)
Q Consensus 197 ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavi 276 (514)
|++.+++||+....... .|.... .++..... ..++++|++.+. +++++|+
T Consensus 77 Vl~~~~~~~~~~~~~~~-~g~~~~------------~~~~~~~~-------------~~d~~~l~~~i~----~~~~~v~ 126 (375)
T 2fnu_A 77 IITTPISFVATANMLLE-SGYTPV------------FAGIKNDG-------------NIDELALEKLIN----ERTKAIV 126 (375)
T ss_dssp EEECSSSCTHHHHHHHH-TTCEEE------------ECCBCTTS-------------SBCGGGSGGGCC----TTEEEEE
T ss_pred EEECCCccHhHHHHHHH-CCCEEE------------EeccCCCC-------------CCCHHHHHhhcC----cCceEEE
Confidence 99999999987543322 221111 01110000 001345555443 3455544
Q ss_pred EccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chh--hhhcCCcccceeE
Q 010250 277 AEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFA--KALSSAYMPIGAI 352 (514)
Q Consensus 277 vEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~s--K~l~gG~~pig~v 352 (514)
+... +|.+.+ +++|.++|++||+++|+||+|+ +|..... ...+..+|++ +++ |.++.| +|++
T Consensus 127 ~~~~---tG~~~~----l~~i~~l~~~~~~~li~D~a~~-~~~~~~~---~~~~~~~~i~~~s~s~~K~~~~g---~g~~ 192 (375)
T 2fnu_A 127 SVDY---AGKSVE----VESVQKLCKKHSLSFLSDSSHA-LGSEYQN---KKVGGFALASVFSFHAIKPITTA---EGGA 192 (375)
T ss_dssp EECG---GGCCCC----HHHHHHHHHHHTCEEEEECTTC-TTCEETT---EETTSSSSEEEEECCTTSSSCCS---SCEE
T ss_pred EeCC---cCCccC----HHHHHHHHHHcCCEEEEECccc-cCCeECC---eeccccCCeEEEeCCCCCCcccc---CceE
Confidence 4333 577766 8999999999999999999997 4332211 1223223554 677 988543 6777
Q ss_pred Ee-C-HHHHHHhhhccCCCC------c---ccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCC
Q 010250 353 LV-S-PEVSEVIHSQSNTLG------S---FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS 421 (514)
Q Consensus 353 ~~-~-~~i~~~l~~~~~~~~------~---~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~ 421 (514)
++ + +++++.+........ . ...+.++..+++.++++...++.+ ++..++.+++.+++.+.|+++...
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~ 270 (375)
T 2fnu_A 193 VVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKA--PFLMQKREEAALTYDRIFKDNPYF 270 (375)
T ss_dssp EEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTH--HHHHHHHHHHHHHHHHHHTTCSSE
T ss_pred EEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcCCCc
Confidence 77 3 778777654210000 0 012233456788777776655443 246788888899999988875221
Q ss_pred CceeE---EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--------------------------
Q 010250 422 PIIGE---IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------------------------- 472 (514)
Q Consensus 422 ~~~~~---v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------------------------- 472 (514)
.+... ..+.+.++.+.+.... ......+.+.|.++||.++..
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 341 (375)
T 2fnu_A 271 TPLHPLLKDKSSNHLYPILMHQKF---------FTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFY 341 (375)
T ss_dssp EESGGGCSSCCCCSCEEEEECGGG---------GGGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHH
T ss_pred cccCCCCCCCcceEEEEEEeCccc---------cchHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHH
Confidence 11110 0122334456654310 001456888899999998721
Q ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 473 GDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 473 g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
.+.||++++..+|++|+++++++|+++++++
T Consensus 342 ~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 342 HAEISLPCHANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp HHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred hCEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 1469999998899999999999999988654
No 168
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.86 E-value=4.7e-20 Score=192.69 Aligned_cols=319 Identities=14% Similarity=0.096 Sum_probs=191.8
Q ss_pred CCHHHHHHHHHHHh-cCCccc---cccccCCc--hHHHHH-HHHHHhcCcCCCCeEEE-eCChhHHHHHHHHHHHHHHhh
Q 010250 117 SEPRLVAAATAQLN-TLPFYH---SFWNRTTK--PSLDLA-KELLEMFTASKMAKVFF-TNSGSEANDTQVKLVWYYNNA 188 (514)
Q Consensus 117 ~~p~v~~A~~~~l~-~~~~~~---~~~~~~~~--~~~ela-~~L~~~~~~~~~~~v~~-~~sGseA~~~Alk~a~~~~~~ 188 (514)
.+|+|++|+.+++. .....+ .++.+... ...+++ +++++++ +.+.+.+ ++||++|++.+++.++
T Consensus 57 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~---g~~~~~v~~~sGs~a~~~a~~~~~----- 128 (447)
T 3h7f_A 57 VPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALF---GAEFANVQPHSGAQANAAVLHALM----- 128 (447)
T ss_dssp CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH---TCSEEECCCSSHHHHHHHHHHHHC-----
T ss_pred CCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHc---CCCceEEEeCCHHHHHHHHHHHhc-----
Confidence 49999999999885 332221 12222211 225566 8888887 3445666 9999999999998774
Q ss_pred cCCCCccEEEEEecCCcccc-eee-eecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHHHHHHHHHHH
Q 010250 189 LGRPNKKKFIARQKSYHGST-LIA-ASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLANNLEDLIL 265 (514)
Q Consensus 189 ~~~~~~~~ii~~~~~yHG~t-~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~li~ 265 (514)
..+++|++.+++|++.. .+. ....+.. +. ....+.. ..+ ..++++|++++.
T Consensus 129 ---~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~-----~~-----~~~~~~~~~~~-------------~~d~~~l~~~i~ 182 (447)
T 3h7f_A 129 ---SPGERLLGLDLANGGHLTHGMRLNFSGKL-----YE-----NGFYGVDPATH-------------LIDMDAVRATAL 182 (447)
T ss_dssp ---CTTCEEEEECGGGTCCGGGTCTTSHHHHS-----SE-----EEEECCCTTTC-------------SCCHHHHHHHHH
T ss_pred ---CCCCEEEecCcccccccchhhhhhhcCCe-----eE-----EEEcCcCcccC-------------CcCHHHHHHHHH
Confidence 33568999999987732 111 1111100 00 0001110 000 112578888876
Q ss_pred HhCCCcEEEEEE-ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchh--chhhh
Q 010250 266 KEGPETIAAFIA-EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLV--SFAKA 341 (514)
Q Consensus 266 ~~~~~~~aaviv-Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv--~~sK~ 341 (514)
+..+ .+|++ .|.+++++ ++++|+++|++||++||+||+|. |+.+.|..... .. ..|++ +++|+
T Consensus 183 ~~~~---~~i~~~~~~~~~~~-------~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~--~~-~~di~~~s~sK~ 249 (447)
T 3h7f_A 183 EFRP---KVIIAGWSAYPRVL-------DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSP--VP-HADVVSTTVHKT 249 (447)
T ss_dssp HHCC---SEEEEECSSCCSCC-------CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCS--TT-TCSEEEEESSGG
T ss_pred hcCC---eEEEEcCCCCCCcc-------CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCC--CC-CCcEEEecCCcC
Confidence 5332 34555 67665543 49999999999999999999974 55444432211 11 24666 56899
Q ss_pred hcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCc-HHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhh
Q 010250 342 LSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH-PVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKA 417 (514)
Q Consensus 342 l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~-pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~ 417 (514)
++| ++.|++++++++++.+... ...+++++. ...++++.+++..+.+ +++.+++.++++++.+.|++
T Consensus 250 l~G--~~gG~i~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 320 (447)
T 3h7f_A 250 LGG--GRSGLIVGKQQYAKAINSA-------VFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMA 320 (447)
T ss_dssp GCC--CSCEEEEECGGGHHHHHHH-------HTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCC--CCeEEEEECHHHHHHHhhh-------cCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 975 6889999999988887642 122233332 3334444455554432 34677888888888888876
Q ss_pred c----cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE----ee-------CCEEEEeCCC
Q 010250 418 F----SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----VS-------GDNIMMSPPF 482 (514)
Q Consensus 418 l----~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~-------g~~iRi~p~~ 482 (514)
. ...+.+.. ...+.++.+++..... ....+...|.++||++. +. ++.+|+.+|.
T Consensus 321 ~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~ 389 (447)
T 3h7f_A 321 PDVAKAGVSVVSG-GTDVHLVLVDLRDSPL----------DGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPA 389 (447)
T ss_dssp HHHHHTTCEEGGG-SCSSSEEEEECTTSSC----------CHHHHHHHHHHTTEECBC-------------CEEEEECHH
T ss_pred ccccCCCeEEecC-CCCCCEEEEEcCCCCC----------CHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHH
Confidence 4 12222110 0123455566543211 13445566777799987 32 2569998876
Q ss_pred C----CCHHHHHHHHHHHHHHHHH
Q 010250 483 I----MSPEEVDELISKYGKALKA 502 (514)
Q Consensus 483 ~----~t~e~id~~~~~l~~~l~~ 502 (514)
. ++++|+++++++|++++++
T Consensus 390 ~~~~~~~~eei~~~~~~l~~~l~~ 413 (447)
T 3h7f_A 390 LATRGFGDTEFTEVADIIATALAT 413 (447)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHS
T ss_pred HhhCCCCHHHHHHHHHHHHHHHhc
Confidence 5 7899999999999999853
No 169
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.85 E-value=3.9e-20 Score=189.43 Aligned_cols=314 Identities=13% Similarity=0.114 Sum_probs=205.7
Q ss_pred CHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEE
Q 010250 118 EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF 197 (514)
Q Consensus 118 ~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~i 197 (514)
+|++++++.+++++..+ .+.+...++++.++++++ .+++++++||++|++.+++.+. . .++++|
T Consensus 19 ~~~~~~a~~~~~~~~~~------~~~~~~~~l~~~la~~~~---~~~~~~~~~gt~al~~~~~~~~------~-~~gd~V 82 (393)
T 1mdo_A 19 GAEELAAVKTVLDSGWI------TTGPKNQELEAAFCRLTG---NQYAVAVSSATAGMHIALMALG------I-GEGDEV 82 (393)
T ss_dssp CHHHHHHHHHHHHHTCC------SSSHHHHHHHHHHHHHHC---CSEEEEESCHHHHHHHHHHHTT------C-CTTCEE
T ss_pred CHHHHHHHHHHHhcCCc------CCChHHHHHHHHHHHHhC---CCcEEEecChHHHHHHHHHHcC------C-CCCCEE
Confidence 58899999999876422 134567889999999983 4589999999999999998761 1 335689
Q ss_pred EEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 010250 198 IARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFI 276 (514)
Q Consensus 198 i~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavi 276 (514)
++.+++|++.... +...|.... .++.. +.+. .++++|++.+. +++++|+
T Consensus 83 l~~~~~~~~~~~~-~~~~g~~~~------------~v~~~~~~~~-------------~d~~~l~~~l~----~~~~~v~ 132 (393)
T 1mdo_A 83 ITPSMTWVSTLNM-IVLLGANPV------------MVDVDRDTLM-------------VTPEHIEAAIT----PQTKAII 132 (393)
T ss_dssp EEESSSCHHHHHH-HHHTTCEEE------------EECBCTTTCC-------------BCHHHHHHHCC----TTEEEEC
T ss_pred EeCCCccHhHHHH-HHHCCCEEE------------EEeccCCcCC-------------CCHHHHHHhcC----CCceEEE
Confidence 9999999886432 222222111 11111 0000 11467776664 3577888
Q ss_pred EccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhchh----hhhcCCccccee
Q 010250 277 AEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVSFA----KALSSAYMPIGA 351 (514)
Q Consensus 277 vEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~~s----K~l~gG~~pig~ 351 (514)
+.+. .|.+.+ +++|.++|++||+++|+||+|+ |+...|.. ++. +|++++| |++++| ++|+
T Consensus 133 ~~~~---~G~~~~----~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~-----~~~-~d~~~~S~~k~K~l~~~--~~g~ 197 (393)
T 1mdo_A 133 PVHY---AGAPAD----LDAIYALGERYGIPVIEDAAHATGTSYKGRH-----IGA-RGTAIFSFHAIKNITCA--EGGI 197 (393)
T ss_dssp CBCG---GGCCCC----HHHHHHHHHHHTCCBCEECTTCTTCEETTEE-----TTS-SSEEEEECCTTSSSCSS--SCEE
T ss_pred EeCC---CCCcCC----HHHHHHHHHHcCCeEEEECccccCCeECCee-----cCC-CCeEEEeCCCCCccccc--cceE
Confidence 7763 455554 9999999999999999999998 44333321 232 7888766 899874 6888
Q ss_pred EEeC-HHHHHHhhhccCCCC--------------cc---cccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Q 010250 352 ILVS-PEVSEVIHSQSNTLG--------------SF---SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQD 413 (514)
Q Consensus 352 v~~~-~~i~~~l~~~~~~~~--------------~~---~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~ 413 (514)
++++ +++++.+........ .+ ..|..+..+++.++++.+.++.++ +..++.+++.+++++
T Consensus 198 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~--~~~~~~~~~~~~l~~ 275 (393)
T 1mdo_A 198 VVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLD--ALNARRAAIAAQYHQ 275 (393)
T ss_dssp EEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 8886 788877754211000 00 011113457888888777776543 456777788888888
Q ss_pred hhhhccCCCce--e--EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC----------------
Q 010250 414 GVKAFSDSPII--G--EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---------------- 473 (514)
Q Consensus 414 ~L~~l~~~~~~--~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---------------- 473 (514)
.|+++. ..+. . ..++.+.++.+.+.+..... ....+.+.|.++||.+++..
T Consensus 276 ~L~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--------~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~ 346 (393)
T 1mdo_A 276 AMADLP-FQPLSLPSWEHIHAWHLFIIRVDEARCGI--------TRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTL 346 (393)
T ss_dssp HHHTSS-CEECCCCSSCEECCCSCEEEECCHHHHSS--------CHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTC
T ss_pred HHhcCC-cccccCCCCCCCceeEEEEEEeccccccc--------CHHHHHHHHHhCCCCcccccCccccChhhhccCCcc
Confidence 887752 1111 0 12334456777775310000 14568889999999887521
Q ss_pred ----------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 474 ----------DNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 474 ----------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
..||+++...+|++|+++++++|+++++..
T Consensus 347 ~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 386 (393)
T 1mdo_A 347 TLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAGQG 386 (393)
T ss_dssp CCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred CChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 269999888899999999999999887543
No 170
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.85 E-value=1.2e-19 Score=188.27 Aligned_cols=323 Identities=9% Similarity=0.066 Sum_probs=203.9
Q ss_pred ccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCC
Q 010250 112 TALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGR 191 (514)
Q Consensus 112 ~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~ 191 (514)
..++ .+|++.+++.+.++... | ........++.+.|+++++ .+++++++||++|++.+++.+.
T Consensus 26 p~~~-~p~~~~~a~~~~~~~~~-y----~~~~~~~~~l~~~la~~~~---~~~v~~~~ggt~al~~~l~~l~-------- 88 (424)
T 2po3_A 26 PNRI-DRARLYERLDRALDSQW-L----SNGGPLVREFEERVAGLAG---VRHAVATCNATAGLQLLAHAAG-------- 88 (424)
T ss_dssp CCCC-CHHHHHHHHHHHHHHTC-C----SSSCHHHHHHHHHHHHHHT---SSEEEEESCHHHHHHHHHHHHT--------
T ss_pred CCCC-ChHHHHHHHHHHHhcCC-c----ccCCHHHHHHHHHHHHHhC---CCeEEEeCCHHHHHHHHHHHcC--------
Confidence 3455 36789999999887532 1 1113567889999999983 4689999999999999998762
Q ss_pred CCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC-cccCCCCCCChhHHHHHHHHHHHHHHHHhCCC
Q 010250 192 PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGETEEEYSTRLANNLEDLILKEGPE 270 (514)
Q Consensus 192 ~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~ 270 (514)
+ +++|++.+++|++...... ..|.... .++... .|. .++++|++.+. +
T Consensus 89 ~-gd~Vlv~~~~~~~~~~~~~-~~G~~~~------------~v~~~~~~~~-------------~d~~~l~~~i~----~ 137 (424)
T 2po3_A 89 L-TGEVIMPSMTFAATPHALR-WIGLTPV------------FADIDPDTGN-------------LDPDQVAAAVT----P 137 (424)
T ss_dssp C-CSEEEEESSSCTHHHHHHH-HTTCEEE------------EECBCTTTSS-------------BCHHHHGGGCC----T
T ss_pred C-CCEEEECCCccHHHHHHHH-HcCCEEE------------EEecCCCcCC-------------cCHHHHHHhhC----c
Confidence 3 3789999999998754322 2222111 111100 010 01456665553 3
Q ss_pred cEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhchh----hhhcCC
Q 010250 271 TIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVSFA----KALSSA 345 (514)
Q Consensus 271 ~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~~s----K~l~gG 345 (514)
++++|++.+ .+|...+ +++|.++|++||+++|+||+|+ |+...|.. .+..+|++++| |+|++
T Consensus 138 ~~~~v~~~~---~tG~~~~----l~~i~~la~~~~~~li~Dea~~~g~~~~~~~-----~~~~~di~~~S~sk~K~l~~- 204 (424)
T 2po3_A 138 RTSAVVGVH---LWGRPCA----ADQLRKVADEHGLRLYFDAAHALGCAVDGRP-----AGSLGDAEVFSFHATKAVNA- 204 (424)
T ss_dssp TEEEEEEEC---GGGCCCC----HHHHHHHHHHTTCEEEEECTTCTTCEETTEE-----TTSSSSEEEEECCTTSSSCC-
T ss_pred CCcEEEEEC---CCCCcCC----HHHHHHHHHHcCCEEEEECccccCCeECCee-----cccccCEEEEeCCCCCCccC-
Confidence 566776643 3565544 9999999999999999999999 77654432 22225776554 88877
Q ss_pred cccceeEEeC-HHHHHHhhhccCCC--Ccc---cccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc
Q 010250 346 YMPIGAILVS-PEVSEVIHSQSNTL--GSF---SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS 419 (514)
Q Consensus 346 ~~pig~v~~~-~~i~~~l~~~~~~~--~~~---~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~ 419 (514)
.++|+++++ +++++.+....... ..+ ..+.++..+++.+++++..++.++ ++.++.+++.+++++.|+++.
T Consensus 205 -~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~~~~~~--~~~~~~~~~~~~l~~~L~~~~ 281 (424)
T 2po3_A 205 -FEGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTSLDAFP--EVIDRNRRNHAAYREHLADLP 281 (424)
T ss_dssp -SSCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHTCSCT
T ss_pred -CCCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccCC
Confidence 588999998 88887765321100 000 112233446777777776665543 367777788888888887642
Q ss_pred CCCceeEEEe-e--eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-C-C--------------------
Q 010250 420 DSPIIGEIRG-T--GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-G-D-------------------- 474 (514)
Q Consensus 420 ~~~~~~~v~g-~--g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g-~-------------------- 474 (514)
...+.....+ . ..++.+.+.+..... ....+.+.|.++||.+.+. + .
T Consensus 282 g~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r 353 (424)
T 2po3_A 282 GVLVADHDRHGLNNHQYVIVEIDEATTGI--------HRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTER 353 (424)
T ss_dssp TEEECCGGGGSCCCCCCEEEEECHHHHSS--------CHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHH
T ss_pred CccccCCCCCCccccEEEEEEECCccchh--------hHHHHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHH
Confidence 1111110111 1 134556654210000 1456778899999998752 1 0
Q ss_pred ----EEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250 475 ----NIMMSPPFIMSPEEVDELISKYGKALKATEER 506 (514)
Q Consensus 475 ----~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~ 506 (514)
.||+.....+|++|+++++++|++++++..+.
T Consensus 354 ~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~~~~~~ 389 (424)
T 2po3_A 354 LAARVLSLPTGTAIGDDDIRRVADLLRLCATRGREL 389 (424)
T ss_dssp HHTTEEEECCSTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCEEEeeCCCCCCHHHHHHHHHHHHHHHhhhHHH
Confidence 17777668999999999999999998766543
No 171
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.85 E-value=1.2e-20 Score=188.74 Aligned_cols=276 Identities=14% Similarity=0.090 Sum_probs=182.4
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee---cCCCccccCCC
Q 010250 148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS---LSGLPALHQKF 224 (514)
Q Consensus 148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~---~s~~~~~~~~~ 224 (514)
+++++|+++++ .+++++++||++|++.+++.+. .++++|++.++.||+....... ..|...
T Consensus 2 ~l~~~la~~~g---~~~~i~~~sG~~a~~~~~~~~~--------~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~----- 65 (331)
T 1pff_A 2 ALEGKIAKLEH---AEACAATASGMGAIAASVWTFL--------KAGDHLISDDCLYGCTHALFEHQLRKFGVEV----- 65 (331)
T ss_dssp HHHHHHHHHHT---CSEEEEESSHHHHHHHHHHHHC--------CTTCEEEEESCCCHHHHHHHHTHHHHTTCEE-----
T ss_pred hHHHHHHHHhC---CCeEEEeCChHHHHHHHHHHhc--------CCCCEEEEcCCCcchHHHHHHHHHHhcCCEE-----
Confidence 57788888874 2477888889999999998663 2346899999999886432211 112111
Q ss_pred CCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh-
Q 010250 225 DLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK- 303 (514)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~- 303 (514)
..++.. +.+++++.+. +++++|+++++++++|.+.+ +++|.++|++
T Consensus 66 -------~~~~~~------------------d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----~~~i~~~~~~~ 112 (331)
T 1pff_A 66 -------DFIDMA------------------VPGNIEKHLK----PNTRIVYFETPANPTLKVID----IEDAVKQARKQ 112 (331)
T ss_dssp -------EEECTT------------------STTHHHHTCC----TTEEEEEEESSCTTTCCCCC----HHHHHHHHTTS
T ss_pred -------EEeCCC------------------CHHHHHHhhc----CCCeEEEEECCCCCcCcccC----HHHHHHHHhhh
Confidence 111110 1355666553 46889999999999999886 9999999999
Q ss_pred cCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCccc-ceeEEeCH-HHHHHhhhccCCCCccccc-CCC
Q 010250 304 YDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMP-IGAILVSP-EVSEVIHSQSNTLGSFSHG-FTY 378 (514)
Q Consensus 304 ~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~p-ig~v~~~~-~i~~~l~~~~~~~~~~~~~-~t~ 378 (514)
||+++|+||+|+ .|..... . .++ +|++ +++|.+++++.+ +|++++++ ++++.+.. ...+ .+.
T Consensus 113 ~~~~li~D~a~~-~~~~~~~--~-~~~--~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~-------~~~~~~~~ 179 (331)
T 1pff_A 113 KDILVIVDNTFA-SPILTNP--L-DLG--VDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQ-------GIKDITGA 179 (331)
T ss_dssp SSCEEEEECTTT-HHHHCCG--G-GGT--CSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHT-------CCCCCCCC
T ss_pred cCCEEEEECCCc-ccccCCh--h-hcC--CcEEEEECccccCCCCCceEEEEEeCcHHHHHHHHH-------HHHhhcCC
Confidence 999999999997 3232211 1 233 5655 688999986567 78999998 89888874 2333 456
Q ss_pred CCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHhh--hhh-----ccCCCcee----EEEeeeeeEEEEEccCCCCC
Q 010250 379 SGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDG--VKA-----FSDSPIIG----EIRGTGLILGTEFADNKSPN 445 (514)
Q Consensus 379 ~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~--L~~-----l~~~~~~~----~v~g~g~~~~i~~~~~~~~~ 445 (514)
..+++++.++.++++.+.. +...++.....+++++. +.+ +...+.+. ..++.|.++.+.+.+
T Consensus 180 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----- 254 (331)
T 1pff_A 180 IISPHDAWLITRGTLTLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDG----- 254 (331)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS-----
T ss_pred CCCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC-----
Confidence 6788888887777775532 22344444444444432 111 11111110 123467788887741
Q ss_pred CCCCCccchHHHHHHHHHHCCcEEEee-------------------------------CCEEEEeCCCCCCHHHHHHHHH
Q 010250 446 EPFPPEWGIGAYFGAQCEKHGMLVRVS-------------------------------GDNIMMSPPFIMSPEEVDELIS 494 (514)
Q Consensus 446 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------------------------------g~~iRi~p~~~~t~e~id~~~~ 494 (514)
...+...|.++||+++.. .+.||++++...|+++|+.+++
T Consensus 255 ---------~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~ 325 (331)
T 1pff_A 255 ---------LEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQ 325 (331)
T ss_dssp ---------HHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHH
T ss_pred ---------HHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHH
Confidence 234667888899976432 2579999999999999999999
Q ss_pred HHHHH
Q 010250 495 KYGKA 499 (514)
Q Consensus 495 ~l~~~ 499 (514)
+|+++
T Consensus 326 ~l~~~ 330 (331)
T 1pff_A 326 ALDLV 330 (331)
T ss_dssp HHHTC
T ss_pred HHHHh
Confidence 88754
No 172
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.85 E-value=6e-21 Score=197.12 Aligned_cols=319 Identities=16% Similarity=0.128 Sum_probs=182.7
Q ss_pred CCHHHHHHHHHHHhc-CCccc---cccc--cCCchHHHHH-HHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhc
Q 010250 117 SEPRLVAAATAQLNT-LPFYH---SFWN--RTTKPSLDLA-KELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNAL 189 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~-~~~~~---~~~~--~~~~~~~ela-~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~ 189 (514)
.||+|++|+.+++.+ ....+ ..+. ...+...+++ +++++.++. +.+. ++++||++|++.+++.+.
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~-v~~~sGs~a~~~a~~~~~------ 113 (420)
T 3gbx_A 42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGA-DYAN-VQPHSGSQANFAVYTALL------ 113 (420)
T ss_dssp CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTC-SEEE-CCCSSHHHHHHHHHHHHC------
T ss_pred CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCC-CCce-eEecCcHHHHHHHHHHhc------
Confidence 699999999999843 21111 1111 1123334444 667777632 2223 346889999999998763
Q ss_pred CCCCccEEEEEecCCcccceeee--ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh
Q 010250 190 GRPNKKKFIARQKSYHGSTLIAA--SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE 267 (514)
Q Consensus 190 ~~~~~~~ii~~~~~yHG~t~~~~--~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~ 267 (514)
..++.|++.++.|++...... ...+... .....+....+ ..++++|++++.+.
T Consensus 114 --~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~----------~~~~~~~~~~~-------------~~d~~~l~~~i~~~ 168 (420)
T 3gbx_A 114 --QPGDTVLGMNLAQGGHLTHGSPVNFSGKLY----------NIVPYGIDESG-------------KIDYDEMAKLAKEH 168 (420)
T ss_dssp --CTTCEEEEEEEC------------CHHHHS----------EEEEEEECTTC-------------SCCHHHHHHHHHHH
T ss_pred --CCCCEEEecchhhcceeccchhhhhcccce----------eEEeccCCccC-------------CcCHHHHHHHHHhc
Confidence 335678887777655321111 1111000 00000000000 01257888888653
Q ss_pred CCCcEEEEEE-ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhc--hhhhhc
Q 010250 268 GPETIAAFIA-EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVS--FAKALS 343 (514)
Q Consensus 268 ~~~~~aaviv-Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~--~sK~l~ 343 (514)
++++|++ +|.++ ...+ +++|+++|++||+++|+||+|+ |+.+.|..... .. .+|+++ ++|+++
T Consensus 169 ---~~~~v~~~~~~~~---~~~~----l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~--~~-~~di~~~s~sK~~~ 235 (420)
T 3gbx_A 169 ---KPKMIIGGFSAYS---GVVD----WAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNP--VP-HAHVVTTTTHKTLA 235 (420)
T ss_dssp ---CCSEEEECCTTCC---SCCC----HHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCS--TT-TSSEEEEESSGGGC
T ss_pred ---CCeEEEEecCccC---CccC----HHHHHHHHHHcCCEEEEECCcchhceecccCCcc--cc-cCCEEEeecccCCC
Confidence 3456666 45543 3443 9999999999999999999975 55444432211 11 278887 679998
Q ss_pred CCcccceeEEeCH---HHHHHhhhccCCCCcccccCCCCCc-HHHHHHHHHHHHHH-hh--ccHHHHHHHHHHHHHhhhh
Q 010250 344 SAYMPIGAILVSP---EVSEVIHSQSNTLGSFSHGFTYSGH-PVSCAVAIEALKIY-KE--RNIVEQVNKIAPKFQDGVK 416 (514)
Q Consensus 344 gG~~pig~v~~~~---~i~~~l~~~~~~~~~~~~~~t~~~~-pl~~aaa~aal~~~-~~--~~~~~~~~~~~~~l~~~L~ 416 (514)
| .+.|++++++ ++++.+... .+.++++.+ ...++++.+++... ++ +++.+++.++.+++++.|+
T Consensus 236 g--~~gg~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 306 (420)
T 3gbx_A 236 G--PRGGLILAKGGDEELYKKLNSA-------VFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFL 306 (420)
T ss_dssp S--CSCEEEEESSCCHHHHHHHHHH-------HC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C--CCceEEEEcCCcHHHHHHhhhh-------cCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHH
Confidence 5 3458888887 777777631 222223332 33333333344333 22 3567888889999999998
Q ss_pred hccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe-------e----CCEEEEeCCCC--
Q 010250 417 AFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV-------S----GDNIMMSPPFI-- 483 (514)
Q Consensus 417 ~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~-------~----g~~iRi~p~~~-- 483 (514)
+. ...++. ....+.++.+.+..... ....+.+.|.++||++.+ . .+.+||+++..
T Consensus 307 ~~-g~~~~~-~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~ 374 (420)
T 3gbx_A 307 NR-GYKVVS-GGTENHLFLLDLVDKNL----------TGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTR 374 (420)
T ss_dssp HT-TCEEGG-GSCSSSEEEEECGGGTC----------CHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHH
T ss_pred hc-CCeecc-CCCCCeEEEEEcCCCCC----------CHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcc
Confidence 74 221111 01245566777654221 144577788889999987 1 13599998765
Q ss_pred --CCHHHHHHHHHHHHHHHHH
Q 010250 484 --MSPEEVDELISKYGKALKA 502 (514)
Q Consensus 484 --~t~e~id~~~~~l~~~l~~ 502 (514)
+++++|++++++|++++++
T Consensus 375 ~~~~~~~i~~~~~~l~~~l~~ 395 (420)
T 3gbx_A 375 RGFKEAEVKELAGWMCDVLDN 395 (420)
T ss_dssp TTCCHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHHHHHhC
Confidence 5689999999999998864
No 173
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.85 E-value=6.9e-21 Score=195.21 Aligned_cols=313 Identities=13% Similarity=0.147 Sum_probs=199.9
Q ss_pred CHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEE
Q 010250 118 EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF 197 (514)
Q Consensus 118 ~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~i 197 (514)
+|++.+++.+.+....+ ..+.+...++++.++++++ .+++++++||++|++.+++.+. . ..+++|
T Consensus 35 ~~~~~~a~~~~~~~~~~-----~~~~~~~~~l~~~la~~~~---~~~~i~~~~gt~al~~~l~~~~------~-~~gd~v 99 (391)
T 3dr4_A 35 DGNERDYVLECMDTTWI-----SSVGRFIVEFEKAFADYCG---VKHAIACNNGTTALHLALVAMG------I-GPGDEV 99 (391)
T ss_dssp CSSHHHHHHHHHHHTCC-----SSCSHHHHHHHHHHHHHHT---CSEEEEESSHHHHHHHHHHHHT------C-CTTCEE
T ss_pred CHHHHHHHHHHHHcCCc-----cCCChHHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHcC------C-CCcCEE
Confidence 36788888887765321 1245677899999999983 4589999999999999999872 1 345789
Q ss_pred EEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 010250 198 IARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFI 276 (514)
Q Consensus 198 i~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavi 276 (514)
++.+++|++........+.... .++.. ..|.. ++++|++.+. +++++|+
T Consensus 100 l~~~~~~~~~~~~~~~~g~~~~-------------~~~~~~~~~~~-------------d~~~l~~~~~----~~~~~v~ 149 (391)
T 3dr4_A 100 IVPSLTYIASANSVTYCGATPV-------------LVDNDPRTFNL-------------DAAKLEALIT----PRTKAIM 149 (391)
T ss_dssp EEESSSCTHHHHHHHHTTCEEE-------------EECBCTTTCSB-------------CGGGSGGGCC----TTEEEEC
T ss_pred EECCCchHHHHHHHHHCCCEEE-------------EEecCccccCc-------------CHHHHHHhcC----CCceEEE
Confidence 9999999987544332221111 11111 00110 1244555443 3577777
Q ss_pred EccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh----hhhcCCcccceeE
Q 010250 277 AEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA----KALSSAYMPIGAI 352 (514)
Q Consensus 277 vEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s----K~l~gG~~pig~v 352 (514)
+. +..|.+.+ +++|.++|++||+++|+||+|+ +|.. +.-...+..+|++++| |+|++| +.|++
T Consensus 150 ~~---n~tG~~~~----~~~i~~l~~~~~~~li~D~a~~-~g~~---~~~~~~~~~~di~~~S~s~~K~l~~g--~gg~~ 216 (391)
T 3dr4_A 150 PV---HLYGQICD----MDPILEVARRHNLLVIEDAAEA-VGAT---YRGKKSGSLGDCATFSFFGNAIITTG--EGGMI 216 (391)
T ss_dssp CB---CGGGCCCC----HHHHHHHHHHTTCEEEEECTTC-TTCE---ETTEETTSSSSEEEEECBTTSSSCCB--SCEEE
T ss_pred EE---CCCCChhh----HHHHHHHHHHcCCEEEEECccc-ccce---ECCeeecccCCEEEEECCCCCcCCcC--CeEEE
Confidence 43 35566655 9999999999999999999997 3221 1111233346787776 999874 47777
Q ss_pred EeC-HHHHHHhhhccCC-------CCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCce
Q 010250 353 LVS-PEVSEVIHSQSNT-------LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPII 424 (514)
Q Consensus 353 ~~~-~~i~~~l~~~~~~-------~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~ 424 (514)
+++ +++.+.+...... ......+..+..+++.+++++..++.++ ++.++.+++.+++++.|+++ ...+.
T Consensus 217 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~~~~~--~~~~~~~~~~~~l~~~L~~~-g~~~~ 293 (391)
T 3dr4_A 217 TTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQLERVD--EHLAARERVVGWYEQKLARL-GNRVT 293 (391)
T ss_dssp EESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHHHHGGG-TTSEE
T ss_pred EECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhhcC-Ccccc
Confidence 775 5566665431100 0001122335667777777776665443 46788888889999999876 33222
Q ss_pred eE-----EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-------------------------C
Q 010250 425 GE-----IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-------------------------D 474 (514)
Q Consensus 425 ~~-----v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-------------------------~ 474 (514)
.. ....+.++.+.+.+.... ....+.+.|.++||.+++.. .
T Consensus 294 ~~~~~~~~~~~~~~~~i~~~~~~~~---------~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 364 (391)
T 3dr4_A 294 KPHVALTGRHVFWMYTVRLGEGLST---------TRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVD 364 (391)
T ss_dssp CCCCCTTSCCCCSSEEEEECSSCSS---------CHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHH
T ss_pred CcCCCCCCcceeEEEEEEECCccch---------hHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhC
Confidence 11 122233456666532110 14568899999999988542 3
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 475 NIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 475 ~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
.||+.+...+|+|||++++++|++++
T Consensus 365 ~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 365 GLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred eEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 58999999999999999999998754
No 174
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.85 E-value=3e-19 Score=184.26 Aligned_cols=330 Identities=15% Similarity=0.114 Sum_probs=190.9
Q ss_pred EEEccCCcccccCCCCCHHHHHHHHHHHhc-CCccc---cccccCCchHHH----HHHHHHHhcCcCCCCeEEEeCChhH
Q 010250 102 YLDSLAGLWCTALGGSEPRLVAAATAQLNT-LPFYH---SFWNRTTKPSLD----LAKELLEMFTASKMAKVFFTNSGSE 173 (514)
Q Consensus 102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~-~~~~~---~~~~~~~~~~~e----la~~L~~~~~~~~~~~v~~~~sGse 173 (514)
.+++.++. + +.+|+|++|+.+++.+ ....+ .++. ......+ +.+++++.++. +.++ +++++|++
T Consensus 27 ~i~l~~~~---~--~~~~~v~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~g~-~~~~-i~~~sGt~ 98 (417)
T 3n0l_A 27 GLEMIASE---N--FTLPEVMEVMGSILTNKYAEGYPGKRYYG-GCEFVDEIETLAIERCKKLFNC-KFAN-VQPNSGSQ 98 (417)
T ss_dssp SEECCTTC---C--CCCHHHHHHHTBGGGGCCCCEETTEESSS-CCHHHHHHHHHHHHHHHHHHTC-SEEE-CCCSSHHH
T ss_pred Ceeeeccc---C--CCCHHHHHHHhhhhhccccccCCCccccc-cchHHHHHHHHHHHHHHHHhCC-CCcc-eEeccHHH
Confidence 46665442 2 2489999999998843 32111 1111 2222233 34467777632 3233 45677899
Q ss_pred HHHHHHHHHHHHHhhcCCCCccEEEEEecCCccccee--eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhH
Q 010250 174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI--AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE 251 (514)
Q Consensus 174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~--~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (514)
|++.+++.+. ..+++|++.+++|++.... .....+.. + ....++....+.
T Consensus 99 a~~~~~~~~~--------~~gd~vl~~~~~~~~~~~~~~~~~~~g~~-----~-----~~~~~~~~~~~~---------- 150 (417)
T 3n0l_A 99 ANQGVYAALI--------NPGDKILGMDLSHGGHLTHGAKVSSSGKM-----Y-----ESCFYGVELDGR---------- 150 (417)
T ss_dssp HHHHHHHHHS--------CTTCEEEEECC----------------CC-----S-----EEEEECCCTTSS----------
T ss_pred HHHHHHHHhc--------CCCCEEEecccccccccchhhhhhhhcce-----e-----eeEeccCCCCCC----------
Confidence 9999998874 3457899999999875321 11111110 0 001111111111
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccC
Q 010250 252 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYS 330 (514)
Q Consensus 252 ~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~g 330 (514)
.++++|++.+.+. ++++|++.+.+ .|.+.+ +++|+++|++||+++|+||+|+ |+...|.... ...
T Consensus 151 ---~d~~~l~~~i~~~---~~~~v~~~~~~--~G~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~--~~~ 216 (417)
T 3n0l_A 151 ---IDYEKVREIAKKE---KPKLIVCGASA--YARVID----FAKFREIADEIGAYLFADIAHIAGLVVAGEHPS--PFP 216 (417)
T ss_dssp ---CCHHHHHHHHHHH---CCSEEEECCSS--CCSCCC----HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCC--CTT
T ss_pred ---cCHHHHHHHHHhc---CCeEEEECCcc--cCccCC----HHHHHHHHHHcCCEEEEECccchhhhhcccCCC--ccc
Confidence 1257888888643 23455554433 376665 9999999999999999999975 3322222110 001
Q ss_pred CCCchhchh--hhhcCCcccceeEEeC-HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh---ccHHHHH
Q 010250 331 IKPDLVSFA--KALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQV 404 (514)
Q Consensus 331 v~pDiv~~s--K~l~gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~~~~ 404 (514)
..|++++| |+|+| .++|+++++ +++++.+... ..++.+.+.++..+++..++++...+ +++.+++
T Consensus 217 -~~di~~~s~sK~l~g--~~~G~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~ 287 (417)
T 3n0l_A 217 -YAHVVSSTTHKTLRG--PRGGIIMTNDEELAKKINSA------IFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQV 287 (417)
T ss_dssp -TCSEEEEESSTTTCS--CSCEEEEESCHHHHHHHHHH------HTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred -cceEEEeeCccccCC--CCeeEEEECCHHHHHHHhhh------hCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 25787655 99965 567999998 7888887642 12333444566666666666765332 3567778
Q ss_pred HHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----------C
Q 010250 405 NKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----------G 473 (514)
Q Consensus 405 ~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----------g 473 (514)
.++.+++.+.|++. ....... ...+.++.+.+..... ....+.+.|.++||.+.+. .
T Consensus 288 ~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~ 355 (417)
T 3n0l_A 288 RTNAQVLANVLMDR-KFKLVSD-GTDNHLVLMSFLDREF----------SGKDADLALGNAGITANKNTVPGEIRSPFIT 355 (417)
T ss_dssp HHHHHHHHHHHHHT-TCEEGGG-SCSSSEEEEECTTSSS----------CHHHHHHHHHHTTEECEECCCTTCCSCTTTC
T ss_pred HHHHHHHHHHHHhC-CceeccC-CCCceEEEEEcccCCC----------CHHHHHHHHHHcCeEEeccccCCCCcccCCC
Confidence 88888888888763 2221110 0123355566543211 1445778888999998743 1
Q ss_pred CEEEEeCCC----CCCHHHHHHHHHHHHHHHHH
Q 010250 474 DNIMMSPPF----IMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 474 ~~iRi~p~~----~~t~e~id~~~~~l~~~l~~ 502 (514)
+.+|++++. .+++++|++++++|++++++
T Consensus 356 ~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 388 (417)
T 3n0l_A 356 SGLRLGTPALTARGFKEKEMEIVSNYIADILDD 388 (417)
T ss_dssp SEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred CeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 459998763 36799999999999999864
No 175
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.85 E-value=5.9e-20 Score=188.46 Aligned_cols=252 Identities=11% Similarity=0.014 Sum_probs=164.4
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP 218 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~ 218 (514)
+.+...+++++|+++++ .+++++++||++|++.+++.+. ..+++||+.++.||+..... ....|..
T Consensus 57 ~~~~~~~l~~~la~~~g---~~~~i~~~sG~~ai~~~~~~~~--------~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~ 125 (389)
T 3acz_A 57 GNPTVEQFEEMVCSIEG---AAGSAAFGSGMGAISSSTLAFL--------QKGDHLIAGDTLYGCTVSLFTHWLPRFGIE 125 (389)
T ss_dssp CCHHHHHHHHHHHHHHT---CSEEEEESSHHHHHHHHHTTTC--------CTTCEEEEESSCCHHHHHHHHHHHHHTTCE
T ss_pred CChHHHHHHHHHHHHhC---CCeEEEeCCHHHHHHHHHHHHh--------CCCCEEEEeCCCchHHHHHHHHHHHHcCCE
Confidence 45667899999999973 3478899999999999998653 33568999999998853221 1111211
Q ss_pred cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250 219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 298 (514)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~ 298 (514)
. ..++.. +.+++++.+. +++++|++|++++++|.+.+ +++|.
T Consensus 126 ~------------~~v~~~------------------d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----l~~i~ 167 (389)
T 3acz_A 126 V------------DLIDTS------------------DVEKVKAAWK----PNTKMVYLESPANPTCKVSD----IKGIA 167 (389)
T ss_dssp E------------EEECTT------------------CHHHHHHTCC----TTEEEEEEESSCTTTCCCCC----HHHHH
T ss_pred E------------EEECCC------------------CHHHHHHhcC----CCCeEEEEECCCCCCCeecC----HHHHH
Confidence 1 111110 1466666553 46889999999999999887 99999
Q ss_pred HHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccc-eeEEeCH-HHHHHhhhccCCCCcccc
Q 010250 299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPI-GAILVSP-EVSEVIHSQSNTLGSFSH 374 (514)
Q Consensus 299 ~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pi-g~v~~~~-~i~~~l~~~~~~~~~~~~ 374 (514)
++|++||+++|+||+|+++ ..+.. .+..+|++ +++|.++|++.++ |++++++ ++++.+... ..
T Consensus 168 ~~~~~~~~~livD~~~~~~-~~~~~-----~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~-------~~ 234 (389)
T 3acz_A 168 VVCHERGARLVVDATFTSP-CFLKP-----LELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFY-------RK 234 (389)
T ss_dssp HHHHHHTCEEEEECTTTCT-TTCCG-----GGTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHH-------HH
T ss_pred HHHHHcCCEEEEECCCccc-cccCc-----cccCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHH-------HH
Confidence 9999999999999999854 22222 23457887 6889999876787 9999998 888877641 11
Q ss_pred cCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-----------cCCCcee----EEEeeeeeEEEEEc
Q 010250 375 GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-----------SDSPIIG----EIRGTGLILGTEFA 439 (514)
Q Consensus 375 ~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-----------~~~~~~~----~v~g~g~~~~i~~~ 439 (514)
......+|..+.++++.++.+.. ..++..++.+.+.+.|++. ..+|... ..++.|.++.+.+.
T Consensus 235 ~~g~~~~~~~~~~~~~~l~~l~~--r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~ 312 (389)
T 3acz_A 235 DAGSLMAPMDAFLCARGMKTLPI--RMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMK 312 (389)
T ss_dssp HHCCCCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES
T ss_pred hcCCCCCHHHHHHHHcCccHHHH--HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEEC
Confidence 12334578888888887765432 2333444444555544432 1111110 11456788888875
Q ss_pred cCCCCCCCCCCccchHHHHHHHHHHCCcEEEe
Q 010250 440 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV 471 (514)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~ 471 (514)
. .......+.+.|+++..
T Consensus 313 ~--------------~~~~~~~l~~~~i~~~~ 330 (389)
T 3acz_A 313 S--------------FEAAKKLMEHLKVCTLA 330 (389)
T ss_dssp S--------------HHHHHHHHTTCSSSEEB
T ss_pred C--------------HHHHHHHHHhCCCcEEC
Confidence 3 12244556667777654
No 176
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.85 E-value=1.5e-20 Score=191.48 Aligned_cols=314 Identities=16% Similarity=0.154 Sum_probs=196.1
Q ss_pred ccCCCCCHHH----HHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHh
Q 010250 112 TALGGSEPRL----VAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNN 187 (514)
Q Consensus 112 ~~lGh~~p~v----~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~ 187 (514)
.++|+++|.+ .+++.+.+.... ..+.+...++++.++++++ .++++|++||++|++.+++.+.
T Consensus 6 ~~l~~~~~~~~~~~~~a~~~~~~~~~------~~~~~~~~~l~~~la~~~~---~~~~i~~~sgt~al~~~l~~l~---- 72 (373)
T 3frk_A 6 ASFKPMHDEIEYEIKFKFEEIYKRNW------FILGDEDKKFEQEFADYCN---VNYCIGCGNGLDALHLILKGYD---- 72 (373)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHTC------CSSSHHHHHHHHHHHHHHT---SSEEEEESCHHHHHHHHHHHTT----
T ss_pred cCCCcccCCCCHHHHHHHHHHHHCCC------ccCCchHHHHHHHHHHHhC---CCeEEEeCCHHHHHHHHHHHcC----
Confidence 4566665554 455555544332 1245667899999999983 4589999999999999998761
Q ss_pred hcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHHHHHHHHHHHH
Q 010250 188 ALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLANNLEDLILK 266 (514)
Q Consensus 188 ~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~li~~ 266 (514)
. ..+++|++.+++|++...... ..|.... .++.. +.+.. ++++|++.+.
T Consensus 73 --~-~~gd~Vi~~~~~~~~~~~~~~-~~g~~~~------------~~~~~~~~~~~-------------d~~~l~~~l~- 122 (373)
T 3frk_A 73 --I-GFGDEVIVPSNTFIATALAVS-YTGAKPI------------FVEPDIRTYNI-------------DPSLIESAIT- 122 (373)
T ss_dssp --C-CTTCEEEEETTSCTHHHHHHH-HHSCEEE------------EECEETTTTEE-------------CGGGTGGGCC-
T ss_pred --C-CCcCEEEECCCCcHHHHHHHH-HcCCEEE------------EEeccccccCc-------------CHHHHHHhcC-
Confidence 1 335689999999988643322 2221111 01110 00110 1345555443
Q ss_pred hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh----hhh
Q 010250 267 EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA----KAL 342 (514)
Q Consensus 267 ~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s----K~l 342 (514)
+++++|+ | ++..|...+ +++|.++|++||+++|+||+|+ +|.. +.....+..+|++++| |++
T Consensus 123 ---~~~~~v~--~-~n~~G~~~~----l~~i~~l~~~~~~~li~D~a~~-~g~~---~~~~~~~~~~d~~~~S~~~~K~l 188 (373)
T 3frk_A 123 ---EKTKAII--A-VHLYGQPAD----MDEIKRIAKKYNLKLIEDAAQA-HGSL---YKGMKVGSLGDAAGFSFYPAKNL 188 (373)
T ss_dssp ---TTEEEEE--E-ECCTTCCCC----HHHHHHHHHHHTCEEEEECTTC-TTCE---ETTEETTSSSSEEEEECCTTSSS
T ss_pred ---CCCeEEE--E-ECCCcCccc----HHHHHHHHHHcCCEEEEECCcc-cCCE---ECCEeccccccEEEEeCcCCCcc
Confidence 3567777 3 345677665 9999999999999999999997 3221 2223445557888877 999
Q ss_pred cC-CcccceeEEeC-HHHHHHhhhccCC-----CCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhh
Q 010250 343 SS-AYMPIGAILVS-PEVSEVIHSQSNT-----LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV 415 (514)
Q Consensus 343 ~g-G~~pig~v~~~-~~i~~~l~~~~~~-----~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L 415 (514)
++ | ..|+++++ +++.+.+...... ......++++..+++.++.+...++.++ ++.++.+++.+++++.|
T Consensus 189 ~~~g--~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~~~~~--~~~~~~~~~~~~~~~~l 264 (373)
T 3frk_A 189 GSLG--DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKLKYLD--KWNEERRKIAQKYIAGI 264 (373)
T ss_dssp CCSS--SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHHHC
T ss_pred Cccc--eeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHh
Confidence 87 5 26777775 5566655431110 0111234556678888887777666543 46778888888888888
Q ss_pred hhcc-CCCceeEEEeeee--eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-------------------
Q 010250 416 KAFS-DSPIIGEIRGTGL--ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG------------------- 473 (514)
Q Consensus 416 ~~l~-~~~~~~~v~g~g~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g------------------- 473 (514)
+++. ..+.... ..... .+.+... ....+.+.|.++||.+++..
T Consensus 265 ~~~~~~~~~~~~-~~~~~~~~~~~~~~--------------~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~ 329 (373)
T 3frk_A 265 NNPNVIIPVEAD-YAKHVWYTFVIRSE--------------KRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGN 329 (373)
T ss_dssp CCTTEECCCCCT-TEECCCSSEEEEES--------------SHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTS
T ss_pred ccCceEeccCCC-CCceeeEEEEEEeC--------------CHHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCC
Confidence 7652 1110000 01111 1222221 14568899999999987422
Q ss_pred ---------CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 474 ---------DNIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 474 ---------~~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
..||++....+|++||+++++.|+++..
T Consensus 330 ~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~ 366 (373)
T 3frk_A 330 FPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKL 366 (373)
T ss_dssp SHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC-
T ss_pred CHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhh
Confidence 4699999999999999999999987654
No 177
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.84 E-value=1.8e-20 Score=195.87 Aligned_cols=340 Identities=10% Similarity=0.046 Sum_probs=198.7
Q ss_pred CCCE-EEEccCCcccccCC-CCCHHHHHHHHHHHhcC----CccccccccCCchHHHHHHHHHHhcCcCC-----CCeEE
Q 010250 98 NGKK-YLDSLAGLWCTALG-GSEPRLVAAATAQLNTL----PFYHSFWNRTTKPSLDLAKELLEMFTASK-----MAKVF 166 (514)
Q Consensus 98 dG~~-ylD~~s~~~~~~lG-h~~p~v~~A~~~~l~~~----~~~~~~~~~~~~~~~ela~~L~~~~~~~~-----~~~v~ 166 (514)
|++. .+||..| .++. +++|.+.+++.+++..+ ......+. +.....++.+.+++++.+.. .++++
T Consensus 46 ~~~~~~i~l~~g---~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~-~~~G~~~lr~~ia~~l~g~~~~~~~~~~i~ 121 (448)
T 3meb_A 46 DTNPKKVNLGVG---AYRDESGKPWILPAVKEAEAIISSDLSKYNKEYP-PVAGFPLFLEAAQFLMFGKDSKAAQEGRIA 121 (448)
T ss_dssp CCCTTCEEESSC---CCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCC-CTTCCHHHHHHHHHHHHCTTCHHHHTTCEE
T ss_pred CCCCCeEEeecc---cccCCCCCEechHHHHHHHHHHhhcccCCCCCCC-CCcchHHHHHHHHHHhcCCCccccCcCcEE
Confidence 4443 6888777 4433 34555555555552211 11111111 22234567777777652222 47899
Q ss_pred E--eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee----ecCCCccccCCCCCCCCcccccCCCC--
Q 010250 167 F--TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA----SLSGLPALHQKFDLPAPFVLHTDCPH-- 238 (514)
Q Consensus 167 ~--~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~----~~s~~~~~~~~~~~~~~~~~~~~~~~-- 238 (514)
+ ++||++|++.++.+.... .++++|++.+++|++...... .. |... ..+++.+
T Consensus 122 ~~~t~ggt~al~l~~~~~~~~------~~gd~Vlv~~p~~~~~~~~~~~~~~~~-G~~v------------~~~~~~~~~ 182 (448)
T 3meb_A 122 SCQSLSGTGSLHIGFEFLHLW------MPKAEFYMPSTTWPNHYGIYDKVFNKL-KVPY------------KEYTYLRKD 182 (448)
T ss_dssp EEEESHHHHHHHHHHHHHHHH------CTTCCEEEESSCCTHHHHHHHHHHCTT-TSCC------------EEECCBCTT
T ss_pred EEECCcHHHHHHHHHHHHHHh------CCCCEEEECCCCCHhHHHHHHhhHHhC-CCeE------------EEEeccccc
Confidence 9 999999999876654322 234689999999987643332 22 2111 1111100
Q ss_pred -cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc
Q 010250 239 -YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 317 (514)
Q Consensus 239 -~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~ 317 (514)
.|. .+++++++.+.+.. ++..++++...++++|.+ ++.+.+++|.++|++||+++|+||+|.+|
T Consensus 183 ~~~~-------------~d~e~l~~~l~~~~-~~~~~v~~~~p~NPtG~~-~~~~~l~~i~~l~~~~~~~li~Deay~~~ 247 (448)
T 3meb_A 183 GELE-------------IDFSNTKKDIQSAP-EKSIFLFHACAHNPSGID-FTEAQWKELLPIMKEKKHIAFFDSAYQGF 247 (448)
T ss_dssp SCSS-------------BCHHHHHHHHHHSC-TTCEEEEESSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEEESCTTT
T ss_pred cCCC-------------cCHHHHHHHHHhCC-CCcEEEEeCCCCCCCCcC-CCHHHHHHHHHHHHHCCCEEEEecccccc
Confidence 011 01577888776532 334555555556677765 46688999999999999999999999998
Q ss_pred ccccc---cceeccc-CCCCc---hhchhhhhcCCcccceeE--Ee--------C-H----HHHHHhhhccCCCCccccc
Q 010250 318 GRLGT---MFGCDKY-SIKPD---LVSFAKALSSAYMPIGAI--LV--------S-P----EVSEVIHSQSNTLGSFSHG 375 (514)
Q Consensus 318 gr~G~---~~~~~~~-gv~pD---iv~~sK~l~gG~~pig~v--~~--------~-~----~i~~~l~~~~~~~~~~~~~ 375 (514)
+..+. .+....+ +..++ +.+|||.++..++++|++ ++ + + ++++.+.. ....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~-------~~~~ 320 (448)
T 3meb_A 248 ATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTL-------QIRK 320 (448)
T ss_dssp SSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHH-------HHHT
T ss_pred cCCCcccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHH-------HHhc
Confidence 76541 1222221 23345 336899887433899997 65 3 4 55555542 1122
Q ss_pred CCCCCcHHHHHHHHHHHHHHh--------hccHHHHHHHHHHHHHhhhhhccCCCc------eeEEEeeee-eEEEEEcc
Q 010250 376 FTYSGHPVSCAVAIEALKIYK--------ERNIVEQVNKIAPKFQDGVKAFSDSPI------IGEIRGTGL-ILGTEFAD 440 (514)
Q Consensus 376 ~t~~~~pl~~aaa~aal~~~~--------~~~~~~~~~~~~~~l~~~L~~l~~~~~------~~~v~g~g~-~~~i~~~~ 440 (514)
.+.+.+.+++.++.++|+... -+++.++++++++++.+.|+++ ..+. .......+. +..+.+.
T Consensus 321 ~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~- 398 (448)
T 3meb_A 321 TWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKR-KTPGPGSKGTWDHILTAIGMFTFTGLT- 398 (448)
T ss_dssp TTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCSTTTCCCTHHHHCCSSEEECCCC-
T ss_pred ccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCCcCcccccceeCCCceEEEecCCC-
Confidence 344556677777777664311 1345678888888898888875 1111 111112222 2222221
Q ss_pred CCCCCCCCCCccchHHHHHHHH-HHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 441 NKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
. .+...+ .++||++.++. .||+.. .+++++|++++++|.+++++
T Consensus 399 --------------~-~~~~~ll~~~gV~v~~G~--gRis~a-~~~~~~i~~~~~~l~~~l~~ 443 (448)
T 3meb_A 399 --------------P-EHVDYLKEKWSIYLVKAG--GRMSMC-GLTESNCDYVAEAIHDAVTK 443 (448)
T ss_dssp --------------H-HHHHHHHHHHCEEECSGG--GEEEGG-GCCTTTHHHHHHHHHHHHHH
T ss_pred --------------H-HHHHHHHHhCCEEEeCCC--cEEEEe-cCCHHHHHHHHHHHHHHHHh
Confidence 1 233444 67799998743 288852 34788899999999998863
No 178
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.84 E-value=1.9e-19 Score=184.17 Aligned_cols=318 Identities=10% Similarity=0.080 Sum_probs=199.2
Q ss_pred CHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEE
Q 010250 118 EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF 197 (514)
Q Consensus 118 ~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~i 197 (514)
.|++++++.++++...+. ..+.+...++++.++++++ .++.++++||++|++.+++.+. . ..+++|
T Consensus 16 ~~~~~~a~~~~l~~~~~~----~~~~~~~~~l~~~la~~~~---~~~~i~~~sGt~al~~~l~~l~------~-~~gd~V 81 (388)
T 1b9h_A 16 DDAERNGLVRALEQGQWW----RMGGDEVNSFEREFAAHHG---AAHALAVTNGTHALELALQVMG------V-GPGTEV 81 (388)
T ss_dssp CHHHHHHHHHHHHTSCCB----TTTCSHHHHHHHHHHHHTT---CSEEEEESCHHHHHHHHHHHTT------C-CTTCEE
T ss_pred CHHHHHHHHHHHHcCCee----ecCCHHHHHHHHHHHHHhC---CCeEEEeCCHHHHHHHHHHHcC------C-CCcCEE
Confidence 389999999999764221 1234567889999999984 3466777789999999998762 1 234689
Q ss_pred EEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC-cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 010250 198 IARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFI 276 (514)
Q Consensus 198 i~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavi 276 (514)
|+.+++||+....... .|... ..++... .|. .++++|++.+. +++++|+
T Consensus 82 i~~~~~~~~~~~~~~~-~g~~~------------~~v~~~~~~~~-------------~d~~~l~~~i~----~~~~~v~ 131 (388)
T 1b9h_A 82 IVPAFTFISSSQAAQR-LGAVT------------VPVDVDAATYN-------------LDPEAVAAAVT----PRTKVIM 131 (388)
T ss_dssp EEESSSCTHHHHHHHH-TTCEE------------EEECBCTTTCC-------------BCHHHHHHHCC----TTEEEEC
T ss_pred EECCCccHHHHHHHHH-cCCEE------------EEEecCCCcCC-------------CCHHHHHHhcC----cCceEEE
Confidence 9999999987543222 22111 1111110 011 11467777663 3566666
Q ss_pred EccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhchh--hhhcCCcccceeEE
Q 010250 277 AEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAIL 353 (514)
Q Consensus 277 vEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~ 353 (514)
|++. .|.+.+ +++|.++|++||+++|+||+|+ |+...|.. ...++ ..++.+|| |+++|| ++|+++
T Consensus 132 --~~n~-tG~~~~----l~~i~~la~~~~~~li~D~a~~~g~~~~~~~--~~~~~-~i~~~S~s~~K~l~g~--~~G~~~ 199 (388)
T 1b9h_A 132 --PVHM-AGLMAD----MDALAKISADTGVPLLQDAAHAHGARWQGKR--VGELD-SIATFSFQNGKLMTAG--EGGAVV 199 (388)
T ss_dssp --CBCG-GGCCCC----HHHHHHHHHHHTCCBCEECTTCTTCEETTEE--GGGSS-SCEEEECCTTSSSCSS--SCEEEE
T ss_pred --EeCC-ccCcCC----HHHHHHHHHHcCCEEEEecchhcCCccCCee--ccccc-ceEEEEccCCCcccCC--CeEEEE
Confidence 5554 576765 9999999999999999999998 33333321 22222 12334555 788774 688899
Q ss_pred eCHH-H--HHHhhhccCC-----CCcc---cccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCC
Q 010250 354 VSPE-V--SEVIHSQSNT-----LGSF---SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSP 422 (514)
Q Consensus 354 ~~~~-i--~~~l~~~~~~-----~~~~---~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~ 422 (514)
++++ + ++.+...... ...+ ..++++..+++.++++.+.++.++ +..++.+++.+++.+.|+++....
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~l~--~~~~~~~~~~~~l~~~L~~~~~~~ 277 (388)
T 1b9h_A 200 FPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLARLD--EQIAVRDERWTLLSRLLGAIDGVV 277 (388)
T ss_dssp ECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHHTSTTCE
T ss_pred ECCHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccCCCcc
Confidence 8875 6 5655321100 0001 112334467777777666666554 356777888889988888752221
Q ss_pred ceeE----EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-------------------------
Q 010250 423 IIGE----IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG------------------------- 473 (514)
Q Consensus 423 ~~~~----v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g------------------------- 473 (514)
.... .+..+.++.+.+.... ......+.+.|.++||.++++.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (388)
T 1b9h_A 278 PQGGDVRADRNSHYMAMFRIPGLT---------EERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARR 348 (388)
T ss_dssp ECCCCTTCCBCCCSEEEEECTTCC---------HHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHT
T ss_pred ccCCCcCCCccceEEEEEEeCCcC---------cccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCcccccccccC
Confidence 1110 0123567777765310 0014568889999999997431
Q ss_pred ---------CEEEEeCCCCC-CHHHHHHHHHHHHHHHHH
Q 010250 474 ---------DNIMMSPPFIM-SPEEVDELISKYGKALKA 502 (514)
Q Consensus 474 ---------~~iRi~p~~~~-t~e~id~~~~~l~~~l~~ 502 (514)
..|||+....+ |++||+++++.|++++++
T Consensus 349 ~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 349 CPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp CHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 14888877778 999999999999988754
No 179
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.84 E-value=4.3e-20 Score=188.30 Aligned_cols=323 Identities=13% Similarity=0.069 Sum_probs=201.8
Q ss_pred CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc---CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCC
Q 010250 117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA---SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPN 193 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~---~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~ 193 (514)
-+|+|++|+.+.+... ++.. ......++.+++++.+.. .+.++++|++||++|++.+++.+... ..+
T Consensus 16 ~~~~v~~a~~~~~~~~--~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~----~~~- 85 (385)
T 2bkw_A 16 LSGAVQKALDVPSLGH--TSPE---FVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILS----KAP- 85 (385)
T ss_dssp CCHHHHHTTSCCCCCT--TSHH---HHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCT----TCS-
T ss_pred chHHHHHHHhcccccc--CCHH---HHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhcc----CCC-
Confidence 3577777765544321 1100 112345677778877742 12478999999999999999876200 013
Q ss_pred ccEEEEE-ecCCcccceeeeecCCCccccCCCCCCCCcccccCC-CCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCc
Q 010250 194 KKKFIAR-QKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC-PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPET 271 (514)
Q Consensus 194 ~~~ii~~-~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~ 271 (514)
+++||++ .+.||......+...|.. +..++. +..++ .++++|++++.+ ++
T Consensus 86 gd~vlv~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~~~-------------~d~~~l~~~l~~---~~ 137 (385)
T 2bkw_A 86 NKNVLVVSTGTFSDRFADCLRSYGAQ------------VDVVRPLKIGES-------------VPLELITEKLSQ---NS 137 (385)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHTTCE------------EEEECCSSTTSC-------------CCHHHHHHHHHH---SC
T ss_pred CCeEEEEcCCcchHHHHHHHHHcCCc------------eEEEecCCCCCC-------------CCHHHHHHHHhc---CC
Confidence 3577777 445666432222222211 111222 11111 115778888764 24
Q ss_pred EEEEEEccccCCCCcccCChhHHHHHHHHHHhc--CCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcc
Q 010250 272 IAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY--DILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYM 347 (514)
Q Consensus 272 ~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~--gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~ 347 (514)
+++|+++++++++|.+.+ +++|.++|++| |+++|+||+|+ +|.. .+... ...+|+++ ++|+++|+ .
T Consensus 138 ~~~v~~~~~~nptG~~~~----l~~i~~~~~~~~~~~~li~D~a~~-~~~~--~~~~~--~~~~d~~~~s~~K~~~~~-~ 207 (385)
T 2bkw_A 138 YGAVTVTHVDTSTAVLSD----LKAISQAIKQTSPETFFVVDAVCS-IGCE--EFEFD--EWGVDFALTASQKAIGAP-A 207 (385)
T ss_dssp CSEEEEESEETTTTEECC----HHHHHHHHHHHCTTSEEEEECTTT-TTTS--CCCTT--TTTCSEEEEESSSTTCCC-S
T ss_pred CCEEEEEccCCCcCeEcC----HHHHHHHHHhhCCCCEEEEECccc-cCCc--ccccc--ccCceEEEecCccccccC-C
Confidence 668888999999999887 99999999999 99999999997 4432 12222 23467775 46998875 4
Q ss_pred cceeEEeCHHHHH-Hhhhc----cCCC-----------Ccccc--cC-CCCCcHHHHHHHHHHHHHHhhc---cHHHHHH
Q 010250 348 PIGAILVSPEVSE-VIHSQ----SNTL-----------GSFSH--GF-TYSGHPVSCAVAIEALKIYKER---NIVEQVN 405 (514)
Q Consensus 348 pig~v~~~~~i~~-~l~~~----~~~~-----------~~~~~--~~-t~~~~pl~~aaa~aal~~~~~~---~~~~~~~ 405 (514)
++|++++++++++ .+... .... ..+.. +. .+..++.+++++.++++.+.+. ++.++++
T Consensus 208 G~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~ 287 (385)
T 2bkw_A 208 GLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHR 287 (385)
T ss_dssp CEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred cceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 6799999998877 54210 0000 00111 11 1356778888888888877543 4578888
Q ss_pred HHHHHHHhhh-hhccCCCceeEE--E-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee------CCE
Q 010250 406 KIAPKFQDGV-KAFSDSPIIGEI--R-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS------GDN 475 (514)
Q Consensus 406 ~~~~~l~~~L-~~l~~~~~~~~v--~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~------g~~ 475 (514)
++++++.+.| +++ ...+.... . ..+.++.+.+.+ ...+.+.|.++||.+.++ .+.
T Consensus 288 ~~~~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~l~~~gi~v~~g~~~~~~~~~ 352 (385)
T 2bkw_A 288 EMSDWFKDSLVNGL-QLTSVSRYPSNMSAHGLTAVYVAD--------------PPDVIAFLKSHGVVIAGGIHKDIGPKY 352 (385)
T ss_dssp HHHHHHHHHHHTTT-CCEESSCSSSTTBCSSCEEEECSC--------------HHHHHHHHHHTTEECBCCCCTTTGGGE
T ss_pred HHHHHHHHHHHHhc-CceecccCcccccCCceEEEecCC--------------HHHHHHHHHHCCeEEeCCCCcccCCCE
Confidence 8999999999 765 22211100 0 235666776532 345778888999999864 246
Q ss_pred EEEe-CC---CCCCHHHHHHHHHHHHHHHHH
Q 010250 476 IMMS-PP---FIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 476 iRi~-p~---~~~t~e~id~~~~~l~~~l~~ 502 (514)
+|++ .+ +.+|++|+++++++|++++++
T Consensus 353 iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 353 IRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp EEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred EEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 9999 43 357999999999999988753
No 180
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.84 E-value=7.1e-21 Score=196.38 Aligned_cols=333 Identities=13% Similarity=0.097 Sum_probs=203.0
Q ss_pred CEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC-----CCeEEE--eCCh
Q 010250 100 KKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK-----MAKVFF--TNSG 171 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~-----~~~v~~--~~sG 171 (514)
..+|||.+| .+++. ++|.+.+++.++.....+.+ .+.....++.+.+++++.+.. .+++.+ +++|
T Consensus 41 ~~~i~l~~g---~~~d~~~~~~v~~a~~~a~~~~~~~y----~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g 113 (409)
T 4eu1_A 41 KRKVNLSIG---VYRDDADQPFVLECVKQATLGTNMDY----APVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGG 113 (409)
T ss_dssp SSCEECCCS---SCCCTTSCCCCCHHHHTCCCCSCCCC----CCTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHH
T ss_pred cCceeeeee---EEECCCCCEeecHHHHhcCccccccC----CCCCCcHHHHHHHHHHHcCCCchhhccCceeeeecccc
Confidence 457899887 55443 67888888887733222111 122333577777777652222 456754 9999
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcccCCCCCCCh
Q 010250 172 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYWRYAHPGETE 249 (514)
Q Consensus 172 seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 249 (514)
++|++.+..+++.+. .++++|++.+++|++........ |.... .++. ++.|.
T Consensus 114 ~ga~~~~~~~~~~~~-----~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~------------~~~~~~~~~~~-------- 167 (409)
T 4eu1_A 114 TGALRIGGDLLNRFV-----ANCNRIYGPDVGYPNHESIFAKA-GMELT------------PYSYYDPATKG-------- 167 (409)
T ss_dssp HHHHHHHHHHGGGTS-----SSCCEEEEESSCCTHHHHHHHHT-TCEEE------------EECCEETTTTE--------
T ss_pred hHHHHHHHHHHHHhc-----CCCCEEEEeCCCcHhHHHHHHHc-CCeEE------------EEEeecCcCCc--------
Confidence 999999877654321 23478999999998764333222 21111 1111 00011
Q ss_pred hHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc---ccee
Q 010250 250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT---MFGC 326 (514)
Q Consensus 250 ~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~---~~~~ 326 (514)
.++++|++.+.+.. ++.+++++...++++|.+. +.+.+++|.++|++||+++|+||+|.+|+..+. ....
T Consensus 168 -----~d~~~l~~~l~~~~-~~~~~i~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~ 240 (409)
T 4eu1_A 168 -----LNLAGMLECLDKAP-EGSVILVHACAHNPTGVDP-THDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVP 240 (409)
T ss_dssp -----ECHHHHHHHHHHSC-TTCEEEEESSSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHH
T ss_pred -----CcHHHHHHHHHhCC-CCcEEEEECCCCCCCCCCC-CHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHH
Confidence 12578888876532 3445555444466666544 567899999999999999999999998876552 1222
Q ss_pred -cccCCCCchh---chhhhhcCCcccceeE---EeCHH----HHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH
Q 010250 327 -DKYSIKPDLV---SFAKALSSAYMPIGAI---LVSPE----VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY 395 (514)
Q Consensus 327 -~~~gv~pDiv---~~sK~l~gG~~pig~v---~~~~~----i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~ 395 (514)
...+..++++ +|||.++..++++|++ +++++ +++.+.. .....+++.+++++.++.++|+..
T Consensus 241 ~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~ 313 (409)
T 4eu1_A 241 RHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLAL-------LIRPMYNNPPLYGAWVVSSILKDP 313 (409)
T ss_dssp HHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHH-------HHHHHHSSCCHHHHHHHHHHHHCH
T ss_pred HHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHH-------HHhhhcCCCChHHHHHHHHHhCCH
Confidence 2224456654 6899987433899995 56777 5555442 122345566788888888877632
Q ss_pred -------h-hccHHHHHHHHHHHHHhhhhhccCCCc-eeEEEeeeeeEEE-EEccCCCCCCCCCCccchHHHHHHHHH-H
Q 010250 396 -------K-ERNIVEQVNKIAPKFQDGVKAFSDSPI-IGEIRGTGLILGT-EFADNKSPNEPFPPEWGIGAYFGAQCE-K 464 (514)
Q Consensus 396 -------~-~~~~~~~~~~~~~~l~~~L~~l~~~~~-~~~v~g~g~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~l~-~ 464 (514)
+ .++..++++++.+++.+.|+++ ..+. +......|.++.+ .+. .+ +...++ +
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~---------------~~-~~~~ll~~ 376 (409)
T 4eu1_A 314 QLTALWKKELKQMSSRIAEVRKRLVSELKAC-GSVHDWSHIERQVGMMAYTGLT---------------RE-QVELLRSE 376 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCSCCHHHHHSCSSEEECCCC---------------HH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCcceecCCceEEEEeCCC---------------HH-HHHHHHHc
Confidence 1 2356778888889999988875 1111 1111223333322 111 12 344554 6
Q ss_pred CCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 465 HGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 465 ~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
+||++.+++ ||+.. ..++++|++++++|++++
T Consensus 377 ~gv~v~p~~---Ri~~~-~~~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 377 YHIYMTLNG---RAAVS-GLNSTNVEYVSQAIHNVT 408 (409)
T ss_dssp HCEECCTTC---EEEGG-GCCTTTHHHHHHHHHHHH
T ss_pred CCEEEcCCC---EEEEE-ecCHhhHHHHHHHHHHHh
Confidence 799998753 66653 467788999999998775
No 181
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.84 E-value=3.9e-19 Score=188.33 Aligned_cols=344 Identities=13% Similarity=0.093 Sum_probs=205.9
Q ss_pred CCHHHHHHHHHHHhcCCc----cccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCC
Q 010250 117 SEPRLVAAATAQLNTLPF----YHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGR 191 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~----~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~ 191 (514)
-++++++++.+++..... .+....+..+....+++.+.+..+ +.+.+++++++||++|+..+++... .
T Consensus 107 ~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-------~ 179 (500)
T 3tcm_A 107 FSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLI-------R 179 (500)
T ss_dssp SCHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHC-------C
T ss_pred CCHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHc-------C
Confidence 577788888888876421 111112233444445555544432 2356799999999999999998762 0
Q ss_pred CCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCChhHHHHHHHHHHHHHHHHh--
Q 010250 192 PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEYSTRLANNLEDLILKE-- 267 (514)
Q Consensus 192 ~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~le~li~~~-- 267 (514)
..++.|++.+++|++........+.... .+++. ..|. .++++|++.+.+.
T Consensus 180 ~~gd~Vlv~~p~y~~~~~~~~~~g~~~~-------------~~~~~~~~~~~-------------~d~~~l~~~l~~~~~ 233 (500)
T 3tcm_A 180 NEKDGILVPIPQYPLYSASIALHGGALV-------------PYYLNESTGWG-------------LETSDVKKQLEDARS 233 (500)
T ss_dssp STTEEEEEEESCCTHHHHHHHHTTCEEE-------------EEECBTTTTSB-------------CCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHhHHHHHHHcCCEEE-------------EEecccccCCC-------------CCHHHHHHHHHHHHh
Confidence 1346899999999887544333222111 11110 0011 1257788877642
Q ss_pred CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc-cc-ee----cccCC-CC--c-hh-
Q 010250 268 GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MF-GC----DKYSI-KP--D-LV- 336 (514)
Q Consensus 268 ~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~-~~-~~----~~~gv-~p--D-iv- 336 (514)
...++.+|++...++++|.+. +.+.+++|.++|++||+++|+||+|.++...+. .+ .+ ..++. .. + ++
T Consensus 234 ~~~~~k~ivl~~p~NPtG~~~-s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~ 312 (500)
T 3tcm_A 234 RGINVRALVVINPGNPTGQVL-AEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSY 312 (500)
T ss_dssp TTCEEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEE
T ss_pred cCCCceEEEEECCCCCCcccC-CHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEE
Confidence 112454544444466667554 567899999999999999999999997644321 11 11 12222 12 2 33
Q ss_pred -chhhhh-cCCcccceeEEe---CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHH-----------HHhh-cc
Q 010250 337 -SFAKAL-SSAYMPIGAILV---SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALK-----------IYKE-RN 399 (514)
Q Consensus 337 -~~sK~l-~gG~~pig~v~~---~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~-----------~~~~-~~ 399 (514)
+|||++ +-.++++|++++ ++++++.+... ...+++.++++++++..+++ ..++ +.
T Consensus 313 ~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 384 (500)
T 3tcm_A 313 QSVSKGYYGECGKRGGYFEITGFSAPVREQIYKI--------ASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDG 384 (500)
T ss_dssp EESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHH--------HHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHH
T ss_pred ecCCccCCCCCccceEEEEEeCCCHHHHHHHHHH--------HhcccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHH
Confidence 789998 322289999998 88998888641 12345667777777777664 2222 35
Q ss_pred HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeE-EEEEccCCCCCCCC-CCccchHHHH-HHHHHHCCcEEEee----
Q 010250 400 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLIL-GTEFADNKSPNEPF-PPEWGIGAYF-GAQCEKHGMLVRVS---- 472 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~-~i~~~~~~~~~~~~-~~~~~~~~~~-~~~l~~~Gv~~~~~---- 472 (514)
+.++++++++++.+.|+++ +.+......|.++ .+.+..+....... .........+ ...|.++||++.++
T Consensus 385 ~~~~l~~~~~~l~~~L~~~---~g~~~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~ 461 (500)
T 3tcm_A 385 ILASLARRAKALEHAFNKL---EGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFG 461 (500)
T ss_dssp HHHHHHHHHHHHHHHHHTS---TTEECCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTC
T ss_pred HHHHHHHHHHHHHHHHhcC---CCcEEecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccC
Confidence 6778888889999988876 3333333344433 32332110000000 0000001223 35566789999864
Q ss_pred ---C-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010250 473 ---G-DNIMMSPPFIMSPEEVDELISKYGKALKATEERV 507 (514)
Q Consensus 473 ---g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~ 507 (514)
+ ..||++. ..++++|++++++|.++++++.++.
T Consensus 462 ~~~g~~~iRis~--~~~~e~i~~~i~~l~~~~~~~~~~~ 498 (500)
T 3tcm_A 462 QVPGTWHFRCTI--LPQEDKIPAVISRFTVFHEAFMSEY 498 (500)
T ss_dssp CCTTCCBEEEES--CSCTTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEE--CCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 3599995 4899999999999999998877654
No 182
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.83 E-value=2.5e-19 Score=180.90 Aligned_cols=317 Identities=13% Similarity=0.050 Sum_probs=200.2
Q ss_pred CCHHHHHHHHHHHhcCC--ccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCc
Q 010250 117 SEPRLVAAATAQLNTLP--FYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK 194 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~--~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~ 194 (514)
-+|++++++.+.+.... .++. .....+...++.++++++++..+.+++++++||++|+..+++... +.
T Consensus 15 ~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~---------~~ 84 (362)
T 3ffr_A 15 LYPTVRQHMITALDEKIGVISHR-SKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCV---------EK 84 (362)
T ss_dssp CCTTHHHHHHHHHHTTTTTSCTT-SHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHC---------SS
T ss_pred CCHHHHHHHHHHhcCCccCcCCC-CHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhcc---------CC
Confidence 47899999988876533 1111 111224556788888888754345789999999999999998762 23
Q ss_pred cEEEEEecCCccccee-eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEE
Q 010250 195 KKFIARQKSYHGSTLI-AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIA 273 (514)
Q Consensus 195 ~~ii~~~~~yHG~t~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~a 273 (514)
++++....+++.... .....|... ..++.+..+.. ++++|+ . .+++.
T Consensus 85 -~~i~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~~-------------d~~~l~-----~-~~~~~ 132 (362)
T 3ffr_A 85 -KSFHCVNGSFSKRFYEFAGELGREA------------YKEEAAFGKGF-------------YPADIT-----V-PADAE 132 (362)
T ss_dssp -EEEEEECSHHHHHHHHHHHHTTCEE------------EEEECCTTCCC-------------CGGGCC-----C-CTTCC
T ss_pred -cEEEEcCcHHHHHHHHHHHHhCCCe------------EEEecCCCCCC-------------CHHHHh-----c-cCCcc
Confidence 666666666663211 111112111 11111111110 023444 1 24567
Q ss_pred EEEEccccCCCCcccCChhHHHHHHHHHHhc-CCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccce
Q 010250 274 AFIAEPVIGAGGVIPPPATYFEKVQAVVKKY-DILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIG 350 (514)
Q Consensus 274 avivEpv~~~~G~~~p~~~~L~~l~~l~~~~-gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig 350 (514)
+|+++++++.+|.+.+ +++|.++|++| |+++|+||+|+ +|... .+... .|+++ ++|.++++ ..+|
T Consensus 133 ~v~~~~~~nptG~~~~----l~~i~~la~~~p~~~li~D~a~~-~~~~~----~~~~~--~d~~~~s~~K~~~~~-~G~g 200 (362)
T 3ffr_A 133 IICLTHNETSSGVSMP----VEDINTFRDKNKDALIFVDAVSS-LPYPK----FDWTK--IDSVFFSVQKCFGLP-AGLG 200 (362)
T ss_dssp EEEEESEETTTTEECC----HHHHTTSGGGSTTSEEEEECTTT-TTSSC----CCTTS--CSEEEEETTSTTCCC-SCCE
T ss_pred EEEEEcCCCCcceeCC----HHHHHHHHHhCCCCEEEEecccc-cCCcc----cChhH--CcEEEEecccccCCC-CceE
Confidence 7778888888998887 99999999999 99999999987 32211 11111 67765 56999854 4568
Q ss_pred eEEeCHHHHHHhhhccC--CCCcc-----------cccC-CCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHh
Q 010250 351 AILVSPEVSEVIHSQSN--TLGSF-----------SHGF-TYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQD 413 (514)
Q Consensus 351 ~v~~~~~i~~~l~~~~~--~~~~~-----------~~~~-t~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~ 413 (514)
++++++++++.+..... ....+ ..+. .++.+..++.++.++++.+.+ +++.++.+++.+++.+
T Consensus 201 ~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~ 280 (362)
T 3ffr_A 201 VWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINT 280 (362)
T ss_dssp EEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 88999998877754210 00000 0011 344566677777788886654 3467778888888888
Q ss_pred hhhhccCCCcee--EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCCCH
Q 010250 414 GVKAFSDSPIIG--EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSP 486 (514)
Q Consensus 414 ~L~~l~~~~~~~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~t~ 486 (514)
.|+++....... .....+.++.+.+.+ . ...+.+.|.++||.+.++ ++.||+++....++
T Consensus 281 ~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-~------------~~~~~~~l~~~gi~~~~g~~~~~~~~iRis~~~~~~~ 347 (362)
T 3ffr_A 281 YIESSKVFSFGVEDAKLRSMTTIVANTTM-L------------PGEINKILEPFDMAVGAGYGSKKETQIRIANFPAHSL 347 (362)
T ss_dssp HHHHCSSEEESSSCGGGBCSSEEEEEESS-C------------HHHHHHHHGGGTEEEEECSGGGTTTEEEEECCTTSCH
T ss_pred HHHHccCceeccCChhhcCCceEEEecCC-C------------HHHHHHHHHHCCeEEecCccccCCCEEEEECCCCCCH
Confidence 888762211111 001124456666653 1 456888999999999863 35799999888999
Q ss_pred HHHHHHHHHHHHHH
Q 010250 487 EEVDELISKYGKAL 500 (514)
Q Consensus 487 e~id~~~~~l~~~l 500 (514)
+++++++++|++.+
T Consensus 348 e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 348 EQVHKLVQTLKEKI 361 (362)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998754
No 183
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.83 E-value=2.7e-20 Score=188.27 Aligned_cols=312 Identities=12% Similarity=0.030 Sum_probs=187.5
Q ss_pred CHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEE
Q 010250 118 EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF 197 (514)
Q Consensus 118 ~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~i 197 (514)
+|+|++|+.+.+... . .++.+...+++++++++++ .+..++++||++|++.+++.+... ++..+
T Consensus 28 ~p~v~~ai~~~~~~~-----~-~~~~~~~~~l~~~la~~~~---~~~~i~~~~g~~a~~~a~~~~~~~-------g~~~v 91 (359)
T 3pj0_A 28 LTEALQNIDDNLESD-----I-YGNGAVIEDFETKIAKILG---KQSAVFFPSGTMAQQIALRIWADR-------KENRR 91 (359)
T ss_dssp HHHHTTTSCTTCBCC-----B-TTBSHHHHHHHHHHHHHHT---CSEEEEESCHHHHHHHHHHHHHHH-------HTCCE
T ss_pred CHHHHHHHHhhcccC-----c-ccCCHHHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHHHhc-------CCCcE
Confidence 577777776643321 1 1244567899999999873 355677899999999999987532 23346
Q ss_pred EEEecCCccccee--ee-ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEE
Q 010250 198 IARQKSYHGSTLI--AA-SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAA 274 (514)
Q Consensus 198 i~~~~~yHG~t~~--~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aa 274 (514)
|+.++.+|..... .. ...|.... .++.+ .+. .++++|+++ .+++++
T Consensus 92 vi~~~~~~~~~~~~~~~~~~~g~~~~------------~v~~~-~~~-------------~d~~~l~~~-----~~~~~~ 140 (359)
T 3pj0_A 92 VAYHPLSHLEIHEQDGLKELQQITPL------------LLGTA-NQL-------------LTIDDIKSL-----REPVSS 140 (359)
T ss_dssp EEECTTCHHHHSSTTHHHHHHCCEEE------------ECSCT-TSC-------------CCHHHHHTC-----SSCCSE
T ss_pred EEEeccceeeehhcchHHHhcCceEE------------ecCCc-CCC-------------cCHHHHHhc-----cCCceE
Confidence 6666666654321 11 11121110 11111 000 014556554 246778
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc--cccccceecccCCCCchh--chhhhhcCCcccce
Q 010250 275 FIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG--RLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIG 350 (514)
Q Consensus 275 vivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g--r~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pig 350 (514)
|++++.+++.|...++.+++++|.++|++||++||+||++..+. ..|.. ...+....|++ +++|+++++ .. |
T Consensus 141 v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~sK~~~~~-~g-g 216 (359)
T 3pj0_A 141 VLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKS--AEEICALFDSVYVSFYKGIGGI-AG-A 216 (359)
T ss_dssp EEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCC--HHHHHTTCSEEEEESSSTTCCS-SC-E
T ss_pred EEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCC--HHHhhccCCEEEEeccccCCCc-ce-E
Confidence 88887766553345677899999999999999999999986221 11111 11111234665 788998875 23 6
Q ss_pred eEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEE--E
Q 010250 351 AILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI--R 428 (514)
Q Consensus 351 ~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v--~ 428 (514)
++++++++++.+.... ....+.++..++.+ +++.++++... +..++..++++++.+.|+++ +.+... .
T Consensus 217 ~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~-~a~~~~l~~~~--~~~~~~~~~~~~l~~~L~~~---~g~~~~~~~ 286 (359)
T 3pj0_A 217 ILAGNDDFVQEAKIWK----RRYGGDLISLYPYI-LSADYYFEKRI--GKMAEYFEAAKGLAERFNSC---SGVKTVPEV 286 (359)
T ss_dssp EEEECHHHHHHHHHHH----HHTTCCCSCCHHHH-HHHHHHHHHHG--GGHHHHHHHHHHHHHHHHTS---TTEEEESSS
T ss_pred EEECCHHHHHHHHHHH----HHhCCCcchhHHHH-HHHHHHHHHHH--HHhHHHHHHHHHHHHHHhhC---CCceeeccC
Confidence 7788999998876310 11122334444444 44446666442 34556778888888888875 222211 2
Q ss_pred eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-------CEEEEeCC---CCCCHHHHHHHHHHHHH
Q 010250 429 GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-------DNIMMSPP---FIMSPEEVDELISKYGK 498 (514)
Q Consensus 429 g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-------~~iRi~p~---~~~t~e~id~~~~~l~~ 498 (514)
..+.++.+.+.... ......+.+.|.++||++.++. ..+|++.. ...+.+++++++++|.+
T Consensus 287 ~~~~~~~~~~~~~~---------~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~ 357 (359)
T 3pj0_A 287 PVSNMFHVYFENSA---------DEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEK 357 (359)
T ss_dssp CSSSEEEEEESSCH---------HHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHH
T ss_pred CcceEEEEEecCcc---------chhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHh
Confidence 34455666664321 0114567888999999988642 34888643 34689999999999876
Q ss_pred H
Q 010250 499 A 499 (514)
Q Consensus 499 ~ 499 (514)
+
T Consensus 358 ~ 358 (359)
T 3pj0_A 358 E 358 (359)
T ss_dssp H
T ss_pred c
Confidence 5
No 184
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.83 E-value=1.7e-19 Score=183.31 Aligned_cols=312 Identities=15% Similarity=0.150 Sum_probs=196.7
Q ss_pred ccCCCCCHHH----HHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHh
Q 010250 112 TALGGSEPRL----VAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNN 187 (514)
Q Consensus 112 ~~lGh~~p~v----~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~ 187 (514)
..+|+++|.+ .+++.+++.... ..+.+...++++.++++++ .+++++++||++|++.|++.+.
T Consensus 5 ~~~~~~~~~~~~~v~~a~~~~~~~~~------~~~~~~~~~l~~~la~~~~---~~~~~~~~sGt~al~~al~~~~---- 71 (367)
T 3nyt_A 5 IDLKNQQARIKDKIDAGIQRVLRHGQ------YILGPEVTELEDRLADFVG---AKYCISCANGTDALQIVQMALG---- 71 (367)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHCC------CSSCHHHHHHHHHHHHHHT---CSEEEEESCHHHHHHHHHHHTT----
T ss_pred ccccccccccCHHHHHHHHHHHhcCC------ccCChHHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHhC----
Confidence 3456666554 455555544331 1244667899999999983 4589999999999999998772
Q ss_pred hcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHHHHHHHHHHHH
Q 010250 188 ALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLANNLEDLILK 266 (514)
Q Consensus 188 ~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~li~~ 266 (514)
. .++++|++..++|++........+..+. .++.. +.|.. +++++++.+.
T Consensus 72 --~-~~gd~Vi~~~~~~~~~~~~~~~~G~~~~-------------~~~~~~~~~~~-------------d~~~l~~~i~- 121 (367)
T 3nyt_A 72 --V-GPGDEVITPGFTYVATAETVALLGAKPV-------------YVDIDPRTYNL-------------DPQLLEAAIT- 121 (367)
T ss_dssp --C-CTTCEEEEESSSCTHHHHHHHHTTCEEE-------------EECBCTTTCSB-------------CGGGTGGGCC-
T ss_pred --C-CCcCEEEECCCccHHHHHHHHHcCCEEE-------------EEecCCccCCc-------------CHHHHHHhcC-
Confidence 1 3356899999998886544332222111 11111 00110 1345555552
Q ss_pred hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhchh----hh
Q 010250 267 EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVSFA----KA 341 (514)
Q Consensus 267 ~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~~s----K~ 341 (514)
+++++|++++ ..|...+ +++|.++|++||+++|+||+|+ |....|+ ..+...|++++| |.
T Consensus 122 ---~~~~~v~~~~---~~G~~~~----~~~i~~la~~~~~~li~D~a~~~g~~~~~~-----~~~~~~di~~~Sf~~~K~ 186 (367)
T 3nyt_A 122 ---PRTKAIIPVS---LYGQCAD----FDAINAIASKYGIPVIEDAAQSFGASYKGK-----RSCNLSTVACTSFFPSAP 186 (367)
T ss_dssp ---TTEEEECCBC---GGGCCCC----HHHHHHHHHHTTCCBEEECTTTTTCEETTE-----ETTSSSSEEEEECCTTSS
T ss_pred ---cCCcEEEeeC---CccChhh----HHHHHHHHHHcCCEEEEECccccCCeECCe-----eccCCCCEEEEECCCCCc
Confidence 4677877443 3455554 9999999999999999999997 3322232 222223888776 99
Q ss_pred hcC-CcccceeEEe-CHHHHHHhhhccCC-----CCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhh
Q 010250 342 LSS-AYMPIGAILV-SPEVSEVIHSQSNT-----LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDG 414 (514)
Q Consensus 342 l~g-G~~pig~v~~-~~~i~~~l~~~~~~-----~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~ 414 (514)
+++ | . .|++++ ++++++.+...... ......++++..+++.++++++.++.++ ++.++.+++.+++++.
T Consensus 187 l~~~g-~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~--~~~~~~~~~~~~~~~~ 262 (367)
T 3nyt_A 187 LGCYG-D-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEIFE--EEIALRQKVAAEYDLS 262 (367)
T ss_dssp SCCSS-C-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHHH
T ss_pred CCCcC-c-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence 988 6 3 677777 57787776542110 0001224677889999999998888663 4677888888999999
Q ss_pred hhhcc-CCCcee-EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-------------------
Q 010250 415 VKAFS-DSPIIG-EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG------------------- 473 (514)
Q Consensus 415 L~~l~-~~~~~~-~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g------------------- 473 (514)
|+++. ..+... .......++.+.+.+ .+.+.+.|.++||.+++..
T Consensus 263 L~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (367)
T 3nyt_A 263 LKQVGIGTPFIEVNNISVYAQYTVRMDN--------------RESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPV 328 (367)
T ss_dssp HHHTTCCCCCCCTTEECCCSSEEEECSS--------------HHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHH
T ss_pred hccCCeeccCCCCCCceeeEEEEEEeCC--------------HHHHHHHHHHCCCceeccCCCccccChhhhccCCCChH
Confidence 98761 112111 111111223333221 4567889999999876321
Q ss_pred ------CEEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250 474 ------DNIMMSPPFIMSPEEVDELISKYGKA 499 (514)
Q Consensus 474 ------~~iRi~p~~~~t~e~id~~~~~l~~~ 499 (514)
..||+......|++||+++++.|++.
T Consensus 329 ~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 329 GDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp HHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred HHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 25888888889999999999988754
No 185
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.83 E-value=6e-20 Score=189.76 Aligned_cols=287 Identities=14% Similarity=0.093 Sum_probs=180.4
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee---cCCCc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS---LSGLP 218 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~---~s~~~ 218 (514)
..+...+++++|+++++ .+.+++++||++|++.+++.+. ..+++||+.++.||+....... ..|..
T Consensus 79 ~~p~~~~l~~~la~~~g---~~~~~~~~sG~~Ai~~al~~l~--------~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~ 147 (414)
T 3ndn_A 79 GNPTVSVFEERLRLIEG---APAAFATASGMAAVFTSLGALL--------GAGDRLVAARSLFGSCFVVCSEILPRWGVQ 147 (414)
T ss_dssp CCHHHHHHHHHHHHHHT---CSEEEEESSHHHHHHHHHHTTC--------CTTCEEEEESCCCHHHHHHHHTHHHHTTCE
T ss_pred CChHHHHHHHHHHHHHC---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEcCCccchHHHHHHHHHHHcCcE
Confidence 45677899999999873 4689999999999999998653 3457899999999985322111 01111
Q ss_pred cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250 219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 298 (514)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~ 298 (514)
+..++.. ++++|++.+. +++++|++|++++++|.+.+ +++|+
T Consensus 148 ------------~~~v~~~------------------d~~~l~~ai~----~~t~~v~le~p~NptG~~~~----l~~i~ 189 (414)
T 3ndn_A 148 ------------TVFVDGD------------------DLSQWERALS----VPTQAVFFETPSNPMQSLVD----IAAVT 189 (414)
T ss_dssp ------------EEEECTT------------------CHHHHHHHTS----SCCSEEEEESSCTTTCCCCC----HHHHH
T ss_pred ------------EEEeCCC------------------CHHHHHHhcC----CCCeEEEEECCCCCCCcccc----HHHHH
Confidence 1111111 1467777664 35778999999999998876 99999
Q ss_pred HHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCc-ccceeEEeCHHHHH-HhhhccCCCCcccccC
Q 010250 299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAY-MPIGAILVSPEVSE-VIHSQSNTLGSFSHGF 376 (514)
Q Consensus 299 ~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~-~pig~v~~~~~i~~-~l~~~~~~~~~~~~~~ 376 (514)
++|++||+++|+||+|+ .|. .+....+|....+.+++|.+++++ .++|+++++++.+. .+... ...++.
T Consensus 190 ~la~~~g~~livDe~~~-~~~---~~~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~-----~~~~g~ 260 (414)
T 3ndn_A 190 ELAHAAGAKVVLDNVFA-TPL---LQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKL-----MRHTGP 260 (414)
T ss_dssp HHHHHTTCEEEEECTTT-HHH---HCCCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHH-----HHHHCC
T ss_pred HHHHHcCCEEEEECCCc-ccc---cCCchhcCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHH-----HHHcCC
Confidence 99999999999999997 222 222224455334446889998843 78899999988765 44421 012222
Q ss_pred CCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCce----------eEEEeeeeeEEEEEccC
Q 010250 377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPII----------GEIRGTGLILGTEFADN 441 (514)
Q Consensus 377 t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~----------~~v~g~g~~~~i~~~~~ 441 (514)
+ .+|..++.++..++.+.. ..++..++.+.+.+.|++.. .+|.. ...+|.|.++++++...
T Consensus 261 ~--~~~~~a~~~~~~l~~l~~--r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~ 336 (414)
T 3ndn_A 261 A--MSAFNAWVLLKGLETLAI--RVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCP 336 (414)
T ss_dssp C--CCHHHHHHHHHHGGGHHH--HHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSC
T ss_pred C--CCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCC
Confidence 2 367777777766665432 34555666666666665431 11111 11356789999999642
Q ss_pred CCCCCCCCCccchHHHHHHHHHHCCcEEEee----------------------------CCEEEEeCCCCCCHHHHHHHH
Q 010250 442 KSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------------------------GDNIMMSPPFIMSPEEVDELI 493 (514)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------------------------g~~iRi~p~~~~t~e~id~~~ 493 (514)
.. .....+..|...|...++.+..+ .+.||++. ..|+++.++
T Consensus 337 ~~------~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsv----G~e~~~dli 406 (414)
T 3ndn_A 337 ED------VAKQRAFEVLDKMRLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISV----GLEDTDDLI 406 (414)
T ss_dssp GG------GHHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEEC----CSSCHHHHH
T ss_pred cc------ccHHHHHHHHHhCccceEcCCCCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEe----CcCCHHHHH
Confidence 00 00012344555555444333211 24688884 346677777
Q ss_pred HHHHHHH
Q 010250 494 SKYGKAL 500 (514)
Q Consensus 494 ~~l~~~l 500 (514)
+.|+++|
T Consensus 407 ~dl~~al 413 (414)
T 3ndn_A 407 ADIDRAL 413 (414)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 7777765
No 186
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.83 E-value=1.4e-19 Score=186.58 Aligned_cols=281 Identities=15% Similarity=0.124 Sum_probs=184.1
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCccccee---eeecCCCcc
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI---AASLSGLPA 219 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~---~~~~s~~~~ 219 (514)
.+...++++.++++++ .+++++++||++|+..+++... ..+++|++.++.|++.... .....|...
T Consensus 61 ~~~~~~l~~~ia~~~g---~~~~i~~~~g~~ai~~~~~~l~--------~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~ 129 (404)
T 1e5e_A 61 NPTVSNLEGKIAFLEK---TEACVATSSGMGAIAATVLTIL--------KAGDHLISDECLYGCTHALFEHALTKFGIQV 129 (404)
T ss_dssp CHHHHHHHHHHHHHHT---CSEEEEESSHHHHHHHHHHHHC--------CTTCEEEEESCCCHHHHHHHHTHHHHTTCEE
T ss_pred ChHHHHHHHHHHHHhC---CCcEEEeCChHHHHHHHHHHHh--------CCCCEEEEeCCCchhHHHHHHHHHHHcCCEE
Confidence 4556689999999873 3589999999999999998653 2346899999999875321 111122111
Q ss_pred ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHH
Q 010250 220 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA 299 (514)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~ 299 (514)
..++.. +.++|++.+. +++++|+++.+++++|.+.+ +++|.+
T Consensus 130 ------------~~v~~~------------------d~~~l~~~i~----~~t~~v~l~~p~NptG~v~~----l~~i~~ 171 (404)
T 1e5e_A 130 ------------DFINTA------------------IPGEVKKHMK----PNTKIVYFETPANPTLKIID----MERVCK 171 (404)
T ss_dssp ------------EEECTT------------------STTHHHHHCC----TTEEEEEEESSCTTTCCCCC----HHHHHH
T ss_pred ------------EEECCC------------------CHHHHHHhcC----CCCcEEEEECCCCCCCcccC----HHHHHH
Confidence 111110 1356666653 46889999999999998886 999999
Q ss_pred HHHh-cCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccc-eeEEeCHHHHH-HhhhccCCCCcccc
Q 010250 300 VVKK-YDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPI-GAILVSPEVSE-VIHSQSNTLGSFSH 374 (514)
Q Consensus 300 l~~~-~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pi-g~v~~~~~i~~-~l~~~~~~~~~~~~ 374 (514)
+|++ ||+++|+||+|+++... ... + + ..|++ +++|.++++++++ |++++++++++ .+... ..
T Consensus 172 la~~~~~~~li~De~~~~~~~~-~~~--~-~--~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~-------~~ 238 (404)
T 1e5e_A 172 DAHSQEGVLVIADNTFCSPMIT-NPV--D-F--GVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVG-------IK 238 (404)
T ss_dssp HHHTSTTCEEEEECTTTCTTTC-CGG--G-G--TCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTC-------CC
T ss_pred HHHhhcCCEEEEECCCchhhhC-Ccc--c-c--CCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHH-------HH
Confidence 9999 99999999999965321 221 2 2 35665 6889999866887 99999999887 77631 22
Q ss_pred cC-CCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-----------cCCCcee----EEEeeeeeEEEEE
Q 010250 375 GF-TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-----------SDSPIIG----EIRGTGLILGTEF 438 (514)
Q Consensus 375 ~~-t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-----------~~~~~~~----~v~g~g~~~~i~~ 438 (514)
.. +...+++++.++.++++.+. ...++..++.+.+.+.|++. ..+|.+. ..++.|.++.+++
T Consensus 239 ~~~g~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~ 316 (404)
T 1e5e_A 239 DITGSVISPHDAWLITRGLSTLN--IRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFIL 316 (404)
T ss_dssp CCCCCCCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEE
T ss_pred hCCCCCCCHHHHHHHHHhHhHHH--HHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEe
Confidence 22 34578888888888887542 12333334444444444322 1111111 1235588888877
Q ss_pred ccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe---e----------------------------CCEEEEeCCCCCCHH
Q 010250 439 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV---S----------------------------GDNIMMSPPFIMSPE 487 (514)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~---~----------------------------g~~iRi~p~~~~t~e 487 (514)
.+. .....+.+.+.|+++.. + .+.|||++.. |
T Consensus 317 ~~~-------------~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~----e 379 (404)
T 1e5e_A 317 KSG-------------FEGAKKLLDNLKLITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI----E 379 (404)
T ss_dssp TTH-------------HHHHHHHHHTCSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS----S
T ss_pred CCC-------------HHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC----C
Confidence 531 12344566677875442 1 2569999765 8
Q ss_pred HHHHHHHHHHHHHHHHH
Q 010250 488 EVDELISKYGKALKATE 504 (514)
Q Consensus 488 ~id~~~~~l~~~l~~~~ 504 (514)
+++++++.|+++++.+.
T Consensus 380 ~~~~li~~l~~al~~~~ 396 (404)
T 1e5e_A 380 DADELIADFKQGLDALL 396 (404)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 99999999999887543
No 187
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.83 E-value=4.6e-19 Score=182.01 Aligned_cols=326 Identities=12% Similarity=0.103 Sum_probs=201.3
Q ss_pred CHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEE
Q 010250 118 EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF 197 (514)
Q Consensus 118 ~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~i 197 (514)
+|++.+++.+.++.. ++ ....+...++++.|+++++ .+++++++||++|++.+++.+. . .++++|
T Consensus 11 ~~~v~~a~~~~~~~~-~~----~~~g~~~~~l~~~la~~~~---~~~v~~~~ggt~al~~~~~~l~------~-~~gd~V 75 (394)
T 1o69_A 11 GGNELKYIEEVFKSN-YI----APLGEFVNRFEQSVKDYSK---SENALALNSATAALHLALRVAG------V-KQDDIV 75 (394)
T ss_dssp -CCHHHHHHHHHHHT-TT----SCTTHHHHHHHHHHHHHHC---CSEEEEESCHHHHHHHHHHHTT------C-CTTCEE
T ss_pred CHHHHHHHHHHHHcC-Cc----cCCChHHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHcC------C-CCCCEE
Confidence 467888988888652 11 1012446789999999983 4789999999999999998761 1 335689
Q ss_pred EEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEE
Q 010250 198 IARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIA 277 (514)
Q Consensus 198 i~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aaviv 277 (514)
++.+++|++....... .|... ..++....|. .++++|++.+.+.. +++++|++
T Consensus 76 l~~~~~~~~~~~~~~~-~g~~~------------~~v~~~~~~~-------------~d~~~l~~~i~~~~-~~~~~v~~ 128 (394)
T 1o69_A 76 LASSFTFIASVAPICY-LKAKP------------VFIDCDETYN-------------IDVDLLKLAIKECE-KKPKALIL 128 (394)
T ss_dssp EEESSSCGGGTHHHHH-TTCEE------------EEECBCTTSS-------------BCHHHHHHHHHHCS-SCCCEEEE
T ss_pred EECCCccHHHHHHHHH-cCCEE------------EEEEeCCCCC-------------cCHHHHHHHHhccc-CCceEEEE
Confidence 9999999987543332 22111 1111111111 11577888776421 24677777
Q ss_pred ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhch--hhhhcCCcccceeEEe
Q 010250 278 EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVSF--AKALSSAYMPIGAILV 354 (514)
Q Consensus 278 Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~~--sK~l~gG~~pig~v~~ 354 (514)
++. .|...+ +++|.++|++||+++|+||+|+ |+...|.... . ++ ..|+.++ +|.+++ ..+|++++
T Consensus 129 ~~~---~G~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~-~-~~-~~~~~s~s~~K~l~~--~~~G~~~~ 196 (394)
T 1o69_A 129 THL---YGNAAK----MDEIVEICKENDIVLIEDAAEALGSFYKNKALG-T-FG-EFGVYSYNGNKIITT--SGGGMLIG 196 (394)
T ss_dssp ECG---GGCCCC----HHHHHHHHHHTTCEEEEECTTCTTCEETTEETT-S-SS-SEEEEECCTTSSSCC--SSCEEEEE
T ss_pred ECC---CCChhh----HHHHHHHHHHcCCEEEEECcCcccceeCCcccc-c-cc-CcEEEEEeCCccCCC--CCceEEEE
Confidence 763 454444 9999999999999999999998 6654443211 1 11 3577788 577875 46999999
Q ss_pred C-HHHHHHhhhccCCC-------CcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeE
Q 010250 355 S-PEVSEVIHSQSNTL-------GSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGE 426 (514)
Q Consensus 355 ~-~~i~~~l~~~~~~~-------~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~ 426 (514)
+ +++++.+....... .....+..+..+++.++.+++.++.+++ ..++.+++.+++.+.|+++ ..+...
T Consensus 197 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~~--~~~~~~~~~~~l~~~L~~~--~~~~~~ 272 (394)
T 1o69_A 197 KNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLEQ--RVLKKREIYEWYKEFLGEY--FSFLDE 272 (394)
T ss_dssp SCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHTTT--EECCCC
T ss_pred CCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhccc--ccccCC
Confidence 5 78888775421110 0011223334577888877776665543 6788888899999988764 111111
Q ss_pred EE--eeee-eEEEEEccCC---CCC-----CCCCC--ccchHHHHHHHHHHCCcEEEeeC--------------------
Q 010250 427 IR--GTGL-ILGTEFADNK---SPN-----EPFPP--EWGIGAYFGAQCEKHGMLVRVSG-------------------- 473 (514)
Q Consensus 427 v~--g~g~-~~~i~~~~~~---~~~-----~~~~~--~~~~~~~~~~~l~~~Gv~~~~~g-------------------- 473 (514)
.. ..+. ++.+.+.... ... ..+.. .......+.+.|.++||.+++..
T Consensus 273 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~ 352 (394)
T 1o69_A 273 LENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNS 352 (394)
T ss_dssp CTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHH
T ss_pred CCCCcceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHH
Confidence 00 0121 3556654210 000 00000 00124568889999999987541
Q ss_pred -----CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 474 -----DNIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 474 -----~~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
..+++.....+|++|+++++++|+++++
T Consensus 353 ~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~ 385 (394)
T 1o69_A 353 ELFFQKGICLPSGTAMSKDDVYEISKLILKSIK 385 (394)
T ss_dssp HHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred HHHhcCeEEccCCCCCCHHHHHHHHHHHHHHHh
Confidence 2345555667999999999999988764
No 188
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.83 E-value=1.3e-19 Score=187.82 Aligned_cols=240 Identities=15% Similarity=0.086 Sum_probs=159.8
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee---ecCCCc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA---SLSGLP 218 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~---~~s~~~ 218 (514)
..+...+++++|+++++ .+..++++||++|++.+++.++ ..+++||+..+.||+...... ...|..
T Consensus 56 ~~~~~~~l~~~la~~~g---~~~~v~~~sGt~A~~~~l~~~~--------~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~ 124 (421)
T 2ctz_A 56 MNPTVDVLEKRLAALEG---GKAALATASGHAAQFLALTTLA--------QAGDNIVSTPNLYGGTFNQFKVTLKRLGIE 124 (421)
T ss_dssp BCHHHHHHHHHHHHHHT---CSEEEEESSHHHHHHHHHHHHC--------CTTCEEEECSCCCHHHHHHHHTHHHHTTCE
T ss_pred CChHHHHHHHHHHHHhC---CCceEEecCHHHHHHHHHHHHh--------CCCCEEEEeCCCchHHHHHHHHHHHHcCCE
Confidence 34567889999999984 3467888999999999998763 345789999999998654321 111211
Q ss_pred cccCCCCCCCCccccc-CCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHH
Q 010250 219 ALHQKFDLPAPFVLHT-DCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKV 297 (514)
Q Consensus 219 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l 297 (514)
. ..+ +.. +.+++++.+. +++++|++|++++++|.+.+ +++|
T Consensus 125 ~------------~~~~~~~------------------d~~~l~~~i~----~~~~~v~~~~~~n~~G~~~~----l~~i 166 (421)
T 2ctz_A 125 V------------RFTSREE------------------RPEEFLALTD----EKTRAWWVESIGNPALNIPD----LEAL 166 (421)
T ss_dssp E------------EECCTTC------------------CHHHHHHHCC----TTEEEEEEESSCTTTCCCCC----HHHH
T ss_pred E------------EEECCCC------------------CHHHHHHhhc----cCCeEEEEECCCCCCCcccC----HHHH
Confidence 1 111 110 1467777664 46899999999999998887 9999
Q ss_pred HHHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccceeEEeC---HHH----HHHhhhccC-
Q 010250 298 QAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAILVS---PEV----SEVIHSQSN- 367 (514)
Q Consensus 298 ~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pig~v~~~---~~i----~~~l~~~~~- 367 (514)
.++|++||+++|+||+|+++|..+..+ +..+|++ +++|.+++++.++|++++. +++ .+.+.+...
T Consensus 167 ~~~a~~~g~~livD~~~~~~g~~~~~~-----~~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g 241 (421)
T 2ctz_A 167 AQAAREKGVALIVDNTFGMGGYLLRPL-----AWGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPG 241 (421)
T ss_dssp HHHHHHHTCEEEEECGGGGGGTSCCGG-----GGTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGG
T ss_pred HHHHHHcCCEEEEECCcccccccCCcc-----ccCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccch
Confidence 999999999999999996677655433 3457988 6889999855788887774 222 222321000
Q ss_pred CCCc----------------c--cccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEE--
Q 010250 368 TLGS----------------F--SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI-- 427 (514)
Q Consensus 368 ~~~~----------------~--~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v-- 427 (514)
..+. + ..+.....+|+.++++...++.+.+ ..++..++.+++.+.|++. |.+..+
T Consensus 242 ~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~--r~~~~~~~a~~l~~~L~~~---p~v~~v~~ 316 (421)
T 2ctz_A 242 YHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGMETLSL--RAERHVENTLHLAHWLLEQ---PQVAWVNY 316 (421)
T ss_dssp GTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHTC---TTEEEEEC
T ss_pred hhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcchHHH--HHHHHHHhHHHHHHHHHhC---CCeeEEEC
Confidence 0000 0 0112235678888888887776532 2445556777777777664 333322
Q ss_pred -----------------EeeeeeEEEEEcc
Q 010250 428 -----------------RGTGLILGTEFAD 440 (514)
Q Consensus 428 -----------------~g~g~~~~i~~~~ 440 (514)
++.|.++.|++..
T Consensus 317 p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~ 346 (421)
T 2ctz_A 317 PGLPHHPHHDRAQKYFKGKPGAVLTFGLKG 346 (421)
T ss_dssp TTSTTCTTHHHHHHHHTTCCCSEEEEEETT
T ss_pred CCCCCCCCHHHHHHhccCCCceEEEEEeCC
Confidence 4778899999864
No 189
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.82 E-value=1.3e-19 Score=186.31 Aligned_cols=233 Identities=15% Similarity=0.147 Sum_probs=157.6
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeec----CCC
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL----SGL 217 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~----s~~ 217 (514)
.++...+|+++|+++.+ .+.+++++||++|++++++++ ..+++||+.++.|||........ .+.
T Consensus 65 ~~p~~~~l~~~la~l~g---~~~~~~~~sG~~Ai~~~~~l~---------~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~ 132 (400)
T 3nmy_A 65 HNPTRFAYERCVAALEG---GTRAFAFASGMAATSTVMELL---------DAGSHVVAMDDLYGGTFRLFERVRRRTAGL 132 (400)
T ss_dssp CCHHHHHHHHHHHHHHT---CSEEEEESSHHHHHHHHHTTS---------CTTCEEEEESSCCHHHHHHHHHTHHHHHCC
T ss_pred CCHHHHHHHHHHHHHhC---CCCEEEecCHHHHHHHHHHHc---------CCCCEEEEeCCCchHHHHHHHHhhHhhcCe
Confidence 45667889999999873 358999999999999854433 23468999999998754222111 111
Q ss_pred ccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHH
Q 010250 218 PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKV 297 (514)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l 297 (514)
. +..++.. +.+++++.+. +++++|++|++++++|.+.+ +++|
T Consensus 133 ~------------~~~v~~~------------------d~~~l~~~i~----~~~~~v~~e~~~np~G~~~~----l~~i 174 (400)
T 3nmy_A 133 D------------FSFVDLT------------------DPAAFKAAIR----ADTKMVWIETPTNPMLKLVD----IAAI 174 (400)
T ss_dssp E------------EEEECTT------------------SHHHHHHHCC----TTEEEEEEESSCTTTCCCCC----HHHH
T ss_pred E------------EEEECCC------------------CHHHHHHHhc----cCCCEEEEECCCCCCCeeec----HHHH
Confidence 1 1111111 1466776664 47899999999999999886 9999
Q ss_pred HHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCccccee--EEe-CHHHHHHhhhccCCCCcccc
Q 010250 298 QAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGA--ILV-SPEVSEVIHSQSNTLGSFSH 374 (514)
Q Consensus 298 ~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~--v~~-~~~i~~~l~~~~~~~~~~~~ 374 (514)
+++|++||+++|+||+|+.. ... ....+|.++.+.+++|.++|++.++|+ ++. ++++.+.+.. ..+
T Consensus 175 ~~la~~~g~~livDe~~~~~-~~~---~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~-------~~~ 243 (400)
T 3nmy_A 175 AVIARKHGLLTVVDNTFASP-MLQ---RPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAF-------LQN 243 (400)
T ss_dssp HHHHHHTTCEEEEECTTTHH-HHC---CGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHH-------HHH
T ss_pred HHHHHHcCCEEEEECCCccc-ccC---ChhhcCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHH-------HHH
Confidence 99999999999999999621 111 112234433344589999986567766 443 6778777753 233
Q ss_pred cCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEE------------------EeeeeeEEE
Q 010250 375 GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI------------------RGTGLILGT 436 (514)
Q Consensus 375 ~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v------------------~g~g~~~~i 436 (514)
..+...+|+.++.++..++.+.. ..++..++.+.+.+.|++. |.+..+ +|.|.+++|
T Consensus 244 ~~g~~~~~~~a~~~l~~l~~l~~--r~~~~~~~a~~l~~~L~~~---p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~ 318 (400)
T 3nmy_A 244 SIGGVQGPFDSFLALRGLKTLPL--RMRAHCENALALAQWLETH---PAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSI 318 (400)
T ss_dssp HHCCBCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHTTC---TTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEE
T ss_pred hcCCCCCHHHHHHHHHhHhHHHH--HHHHHHHHHHHHHHHHHcC---CCEeEEECCCCCCCcCHHHHHHhCCCCCceEEE
Confidence 34566789888888887776532 3455666667777666543 445544 778999999
Q ss_pred EEcc
Q 010250 437 EFAD 440 (514)
Q Consensus 437 ~~~~ 440 (514)
++..
T Consensus 319 ~l~~ 322 (400)
T 3nmy_A 319 VLKG 322 (400)
T ss_dssp EETT
T ss_pred EeCC
Confidence 9964
No 190
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.82 E-value=1.4e-19 Score=184.60 Aligned_cols=323 Identities=14% Similarity=0.060 Sum_probs=187.8
Q ss_pred CCC-EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250 98 NGK-KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 176 (514)
Q Consensus 98 dG~-~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~ 176 (514)
.|+ .++|+..+-+ --.-+|++++++. .. ..+.....++++.++++++....+++++++||++|++
T Consensus 25 ~g~~~v~~~~~~~~---~~~~~~~v~~a~~----~~-------~~~~~~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~ 90 (374)
T 2aeu_A 25 KGRDALYDLSGLSG---GFLIDEKDKALLN----TY-------IGSSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAIL 90 (374)
T ss_dssp TCGGGCEECSSCCC---CCCCCHHHHHHHT----ST-------THHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred cCccceeeecccCC---CCCCCHHHHHHHH----Hh-------cCchHHHHHHHHHHHHHhCCCCcceEEEEcChHHHHH
Confidence 354 4667654421 1124677887775 11 1122334567777777764212378999999999999
Q ss_pred HHHHHHHHHHhhcCCCCccEEEEEecCCcccce--eeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250 177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTL--IAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254 (514)
Q Consensus 177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~--~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
.+++.+ + +++||+.+++||+... ......|... ..+
T Consensus 91 ~~~~~~---------~-gd~Vl~~~~~y~~~~~~~~~~~~~g~~~------------~~v-------------------- 128 (374)
T 2aeu_A 91 ATILAL---------K-PKKVIHYLPELPGHPSIERSCKIVNAKY------------FES-------------------- 128 (374)
T ss_dssp HHHHHH---------C-CSEEEEECSSSSCCTHHHHHHHHTTCEE------------EEE--------------------
T ss_pred HHHHhC---------C-CCEEEEecCCCCccHHHHHHHHHcCcEE------------EEe--------------------
Confidence 999854 2 4689999999998532 1111112111 000
Q ss_pred HHHHHHHHHHHHhCCCcEEE-EEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCC
Q 010250 255 RLANNLEDLILKEGPETIAA-FIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKP 333 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aa-vivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~p 333 (514)
.+.+++++. . +++++ |+++++++++|. +...+++|.++|++||+++|+||++..+ ..|...........+
T Consensus 129 ~d~~~l~~~----~-~~~~~~v~~~~p~nptG~---~~~~l~~i~~l~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~ 199 (374)
T 2aeu_A 129 DKVGEILNK----I-DKDTLVIITGSTMDLKVI---ELENFKKVINTAKNKEAIVFVDDASGAR-VRLLFNQPPALKLGA 199 (374)
T ss_dssp SCHHHHHTT----C-CTTEEEEEECBCTTSCBC---CHHHHHHHHHHHHHHTCCEEEECTTHHH-HHHHTTCCCHHHHTC
T ss_pred CCHHHHHhc----C-CCccEEEEEccCCCCCCC---CcccHHHHHHHHHHcCCEEEEECCcccc-cccccccCCccccCC
Confidence 013566554 2 35677 888988888884 3355999999999999999999988633 211111000112246
Q ss_pred chh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 010250 334 DLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKF 411 (514)
Q Consensus 334 Div--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l 411 (514)
|++ +++|.|+| +++|++++++++++.+... ......+.+++.++++.++|+.+..+ ..++..++.+.+
T Consensus 200 di~~~S~sK~l~g--~~~G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~ 269 (374)
T 2aeu_A 200 DLVVTSTDKLMEG--PRGGLLAGKKELVDKIYIE-------GTKFGLEAQPPLLAGIYRALKNFNLE-RIRKAFERAKNF 269 (374)
T ss_dssp SEEEEETTSSSSS--CSCEEEEEEHHHHHHHHHH-------HHTTTCBCCHHHHHHHHHHHHHCCHH-HHHHHHHHHHHC
T ss_pred cEEEecCcccccC--cceEEEEECHHHHHHHHHh-------hccccCCCCHHHHHHHHHHHHHHhHH-HHHHHHHHHHHH
Confidence 877 48899875 6899999999999888642 11122356788999999998865321 233333333333
Q ss_pred ----Hhhhhh-ccCC----CceeEEEeeeeeEEEE-EccCCCCCCCCCCccchHHHHH-HHHHHCCcEEEee------CC
Q 010250 412 ----QDGVKA-FSDS----PIIGEIRGTGLILGTE-FADNKSPNEPFPPEWGIGAYFG-AQCEKHGMLVRVS------GD 474 (514)
Q Consensus 412 ----~~~L~~-l~~~----~~~~~v~g~g~~~~i~-~~~~~~~~~~~~~~~~~~~~~~-~~l~~~Gv~~~~~------g~ 474 (514)
++.|.+ +... ++.....+.|.++... +.... .......++ ..+.++||++.++ .+
T Consensus 270 ~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~~~~--------~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~ 341 (374)
T 2aeu_A 270 DLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTI--------NIKKLIEIGFNLLKNYGIITITVAGMPGASK 341 (374)
T ss_dssp CCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHH--------HHHHHHHHHHHHHHHHCEECSTTSSSCSSCC
T ss_pred HHHHHHHHHHhhhhhhhccCcceeeCCceEEEEeecccccc--------cccchHHHHHHHHHhCCEEEecCCCCCCCCC
Confidence 344432 1111 1221234556554432 11000 000011244 4455789998764 23
Q ss_pred EEEEeCCC-CCCHHHHHHHHHHHHHHHHHH
Q 010250 475 NIMMSPPF-IMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 475 ~iRi~p~~-~~t~e~id~~~~~l~~~l~~~ 503 (514)
.+||+++. ..++++++++++.|+++++++
T Consensus 342 ~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~ 371 (374)
T 2aeu_A 342 SLRIDLTSRDAERIDDNYIIKAIVESIKMA 371 (374)
T ss_dssp SEEEETTSGGGGGSCHHHHHHHHHHHHHHH
T ss_pred eEEEEcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 69999753 233344788888887777654
No 191
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.81 E-value=1.9e-18 Score=178.77 Aligned_cols=322 Identities=12% Similarity=0.112 Sum_probs=196.3
Q ss_pred CHHHHHHHHHHHhcCCcc-ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccE
Q 010250 118 EPRLVAAATAQLNTLPFY-HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 196 (514)
Q Consensus 118 ~p~v~~A~~~~l~~~~~~-~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ 196 (514)
+|++++++.+++++.... +....+..+...+++++++++++ .+++++++||++|++.+++.+. . ..+++
T Consensus 15 ~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g---~~~~i~~~~gt~al~~~~~~~~------~-~~gd~ 84 (418)
T 2c81_A 15 SDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNG---VPYCVPTTSGSTALMLALEALG------I-GEGDE 84 (418)
T ss_dssp CHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHT---CSEEEEESCHHHHHHHHHHHTT------C-CTTCE
T ss_pred CHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHcC------C-CCcCE
Confidence 689999999999764322 11112344557899999999873 3478899999999999998762 1 23468
Q ss_pred EEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC-cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEE
Q 010250 197 FIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAF 275 (514)
Q Consensus 197 ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aav 275 (514)
|++.+++|++....... .|.... .++... .|. .++++|++.+. +++++|
T Consensus 85 Vl~~~~~~~~~~~~~~~-~g~~~~------------~~~~~~~~~~-------------~d~~~l~~~i~----~~~~~v 134 (418)
T 2c81_A 85 VIVPSLTWIATATAVLN-VNALPV------------FVDVEADTYC-------------IDPQLIKSAIT----DKTKAI 134 (418)
T ss_dssp EEEESSSCTHHHHHHHH-TTCEEE------------EECBCTTTCS-------------BCHHHHGGGCC----TTEEEE
T ss_pred EEECCCccHhHHHHHHH-cCCEEE------------EEecCCCCCC-------------cCHHHHHHhhC----CCCeEE
Confidence 99999999987543322 221110 111110 011 01456665553 357777
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc-ccccceecccCCCCchh--ch--hhhhcCCcccce
Q 010250 276 IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR-LGTMFGCDKYSIKPDLV--SF--AKALSSAYMPIG 350 (514)
Q Consensus 276 ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr-~G~~~~~~~~gv~pDiv--~~--sK~l~gG~~pig 350 (514)
+++. ..|...+ +++|.++|++||+++|+||+|+.+.. .|.. .+..+|++ +| +|.+++| ++|
T Consensus 135 ~~~~---~~G~~~~----~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~-----~~~~~~~~~~s~s~~K~~~~g--~~g 200 (418)
T 2c81_A 135 IPVH---LFGSMAN----MDEINEIAQEHNLFVIEDCAQSHGSVWNNQR-----AGTIGDIGAFSCQQGKVLTAG--EGG 200 (418)
T ss_dssp CCBC---CTTCCCC----HHHHHHHHHHTTCEEEEECTTCTTCEETTEE-----TTSSSSEEEEECCTTSSSCSS--SCE
T ss_pred EEeC---CcCCccc----HHHHHHHHHHCCCEEEEECcccccCccCCEe-----cccccceEEEeccCCcccCCC--CeE
Confidence 7654 3566554 99999999999999999999986532 2221 22223544 55 8999874 789
Q ss_pred eEEeC-HHHHHHhhhccCCCC-----------ccc--------ccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Q 010250 351 AILVS-PEVSEVIHSQSNTLG-----------SFS--------HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPK 410 (514)
Q Consensus 351 ~v~~~-~~i~~~l~~~~~~~~-----------~~~--------~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~ 410 (514)
+++++ +++++.+........ .+. .+..+..+++.++.+...++.+ ++..++.+++.++
T Consensus 201 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~--~~~~~~~~~~~~~ 278 (418)
T 2c81_A 201 IIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQEL--DDKNAIREKNAMF 278 (418)
T ss_dssp EEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHTTH--HHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 99984 787776653111000 011 1111223455554444444433 2456777777888
Q ss_pred HHhhhhhccCCCceeEEEe--eee--eEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcE---EEee----------
Q 010250 411 FQDGVKAFSDSPIIGEIRG--TGL--ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GML---VRVS---------- 472 (514)
Q Consensus 411 l~~~L~~l~~~~~~~~v~g--~g~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~---~~~~---------- 472 (514)
+.+.|+++....+.....+ ... ++.+.+.+..... .....+.+.|.++ ||. +++.
T Consensus 279 l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~ 351 (418)
T 2c81_A 279 LNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDPVKFGG-------LNADQFCEILREKLNMGTFYLHPPYLPVHKNPLF 351 (418)
T ss_dssp HHHHHTTSTTEEECCCCTTEEECCCSEEEEEECGGGTTT-------CCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTC
T ss_pred HHHHhccCCCcccCCCCCCCcccccEEEEEEEccccccc-------cCHHHHHHHHHHcCCCCcccccccccccccCchh
Confidence 8888876522111111111 112 3445664310000 0145688899998 999 7642
Q ss_pred ---------------------C----------CEEEEeCCCCC-CHHHHHHHHHHHHHHHHH
Q 010250 473 ---------------------G----------DNIMMSPPFIM-SPEEVDELISKYGKALKA 502 (514)
Q Consensus 473 ---------------------g----------~~iRi~p~~~~-t~e~id~~~~~l~~~l~~ 502 (514)
+ +.||++++..+ |+|||++++++|++++++
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~ 413 (418)
T 2c81_A 352 CPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAILLAEPSHLSLLVDAVAELARK 413 (418)
T ss_dssp CGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHT
T ss_pred cccccccccccccccccccccCCChHHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHHh
Confidence 1 36999999899 999999999999988764
No 192
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.81 E-value=3.9e-18 Score=174.68 Aligned_cols=323 Identities=15% Similarity=0.153 Sum_probs=200.0
Q ss_pred cccccCCC--CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHH
Q 010250 109 LWCTALGG--SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYN 186 (514)
Q Consensus 109 ~~~~~lGh--~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~ 186 (514)
++..+++. -+|++++++.++++...++ +.+...++++.++++++ .+++++++||++|++.+++.++. .
T Consensus 3 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~------~~~~~~~l~~~la~~~~---~~~~i~~~sGt~a~~~al~~~~~-~ 72 (390)
T 3b8x_A 3 MINYPLASSTWDDLEYKAIQSVLDSKMFT------MGEYVKQYETQFAKTFG---SKYAVMVSSGSTANLLMIAALFF-T 72 (390)
T ss_dssp --CBCSCCCCCCHHHHHHHHHHHHHTCCS------SCHHHHHHHHHHHHHHT---CSEEEEESCHHHHHHHHHHHTTS-S
T ss_pred ceeccCCCCCCCHHHHHHHHHHHHcCCCC------CChHHHHHHHHHHHHHC---CCcEEEECCHHHHHHHHHHHHHh-h
Confidence 34445664 3789999999998764221 34667889999999984 34799999999999999987631 0
Q ss_pred hhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC-cccCCCCCCChhHHHHHHHHHHHHHHH
Q 010250 187 NALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGETEEEYSTRLANNLEDLIL 265 (514)
Q Consensus 187 ~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~le~li~ 265 (514)
...+..++++||+...+||+....... .|... ..++... .|. .++++|++.+.
T Consensus 73 ~~~~~~~g~~Vi~~~~~~~~~~~~~~~-~g~~~------------~~~~~~~~~~~-------------~d~~~l~~~i~ 126 (390)
T 3b8x_A 73 KKPRLKKGDEIIVPAVSWSTTYYPLQQ-YGLRV------------KFVDIDINTLN-------------IDIESLKEAVT 126 (390)
T ss_dssp SSCSCCTTCEEEEESSSCHHHHHHHHH-TTCEE------------EEECBCTTTCS-------------BCHHHHHHHCC
T ss_pred hhcCCCCcCEEEECCCCcHHHHHHHHH-cCCEE------------EEEecCccccC-------------cCHHHHHHHhC
Confidence 000113356899999999987543332 22111 0111110 011 11467777664
Q ss_pred HhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhh----h
Q 010250 266 KEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAK----A 341 (514)
Q Consensus 266 ~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK----~ 341 (514)
+++++|++.+. .|...+ +++|.++|++||+++|+||+|+ +|... ....+|..+|+.+++| .
T Consensus 127 ----~~~~~v~~~~~---~g~~~~----~~~i~~l~~~~~~~li~D~a~~-~g~~~---~~~~~g~~~~~~~~s~~~~k~ 191 (390)
T 3b8x_A 127 ----DSTKAILTVNL---LGNPNN----FDEINKIIGGRDIILLEDNCES-MGATF---NNKCAGTFGLMGTFSSFYSNH 191 (390)
T ss_dssp ----TTEEEEEEECG---GGCCCC----HHHHHHHHTTSCCEEEEECTTC-TTCEE---TTEETTSSSSEEEEECCTTSS
T ss_pred ----cCCeEEEEECC---ccChhh----HHHHHHHHHHcCCEEEEECcCc-ccCEE---CCcccccccceEEEEccCCCC
Confidence 35666666432 244433 9999999999999999999998 32221 2245677788888775 4
Q ss_pred hcCCcccceeEEeCH-HHHHHhhhccCCC--C-------------------cc---cccCCCCCcHHHHHHHHHHHHHHh
Q 010250 342 LSSAYMPIGAILVSP-EVSEVIHSQSNTL--G-------------------SF---SHGFTYSGHPVSCAVAIEALKIYK 396 (514)
Q Consensus 342 l~gG~~pig~v~~~~-~i~~~l~~~~~~~--~-------------------~~---~~~~t~~~~pl~~aaa~aal~~~~ 396 (514)
+++| ..|++++++ ++.+.+......- + .+ ..|+++..+++.++++++.++.++
T Consensus 192 ~~~g--~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~ 269 (390)
T 3b8x_A 192 IATM--EGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQLKKLP 269 (390)
T ss_dssp SCSS--SCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHHHHHH
T ss_pred CccC--CceEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHHHHHHH
Confidence 4332 247777775 6665543211000 0 00 123445578899999988887664
Q ss_pred hccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeee--eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--
Q 010250 397 ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGL--ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-- 472 (514)
Q Consensus 397 ~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-- 472 (514)
+..++.+++.+++.+.|+++....+.... ..+. .+.+.+..... . ....+.+.|.++||.+++.
T Consensus 270 --~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~-~--------~~~~l~~~L~~~gI~v~~~~~ 337 (390)
T 3b8x_A 270 --RFISVRRKNAEYFLDKFKDHPYLDVQQET-GESSWFGFSFIIKKDSG-V--------IRKQLVENLNSAGIECRPIVT 337 (390)
T ss_dssp --HHHHHHHHHHHHHHHHHTTCSSEEECCCC-SBCCCCEEEEEECTTSC-C--------CHHHHHHHHHHTTBCCBCSTT
T ss_pred --HHHHHHHHHHHHHHHHhcCCCCcccCCCC-CCcccEEEEEEecCcCc-c--------cHHHHHHHHHHCCCCeeeecC
Confidence 56788888899999988765221111100 1222 24445542100 0 1456788899999987741
Q ss_pred -----C-----------------------CEEEEeCCCCCCHHHHHHHHHHH
Q 010250 473 -----G-----------------------DNIMMSPPFIMSPEEVDELISKY 496 (514)
Q Consensus 473 -----g-----------------------~~iRi~p~~~~t~e~id~~~~~l 496 (514)
. ..|||+....+|++||+++++.|
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 338 GNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp SSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred CchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 1 14899999999999999999876
No 193
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.80 E-value=4.6e-18 Score=179.92 Aligned_cols=342 Identities=13% Similarity=0.062 Sum_probs=203.0
Q ss_pred CCHHHHHHHHHHHhcCC----ccccccccCCchHHHHHHHHHHhcC--cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcC
Q 010250 117 SEPRLVAAATAQLNTLP----FYHSFWNRTTKPSLDLAKELLEMFT--ASKMAKVFFTNSGSEANDTQVKLVWYYNNALG 190 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~----~~~~~~~~~~~~~~ela~~L~~~~~--~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~ 190 (514)
.+.++.+++.+.+.... ..++...+..+....+++.+.+..+ +...+++++++|+++|+..++++..
T Consensus 102 ~P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~------- 174 (498)
T 3ihj_A 102 FPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILV------- 174 (498)
T ss_dssp SCHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHC-------
T ss_pred CCHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHc-------
Confidence 36677788877776532 1112122334455666666665532 1246899999999999999998763
Q ss_pred CCC---ccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCChhHHHHHHHHHHHHHHH
Q 010250 191 RPN---KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEYSTRLANNLEDLIL 265 (514)
Q Consensus 191 ~~~---~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~le~li~ 265 (514)
.++ ++.|++..+.|.......... |.... .+++. ..|. .++++|++.+.
T Consensus 175 ~~gd~~~d~Vlv~~p~y~~~~~~~~~~-g~~~v------------~~~~~~~~~~~-------------~d~~~le~~l~ 228 (498)
T 3ihj_A 175 SGGGKSRTGVMIPIPQYPLYSAVISEL-DAIQV------------NYYLDEENCWA-------------LNVNELRRAVQ 228 (498)
T ss_dssp CCCGGGSEEEEEEESCCTHHHHHHHHT-TCEEE------------EEECBGGGTTB-------------CCHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCchhHHHHHHHc-CCEEE------------EeeccccccCC-------------CCHHHHHHHHH
Confidence 122 358999999998765333222 21111 01110 0111 11578888887
Q ss_pred HhCCC-cEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc--cceeccc--CCC------Cc
Q 010250 266 KEGPE-TIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--MFGCDKY--SIK------PD 334 (514)
Q Consensus 266 ~~~~~-~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~--~~~~~~~--gv~------pD 334 (514)
..... ++.+|++...++++|.+. +.+.+++|.++|++||+++|+||+|..+...+. ...+... +.. ..
T Consensus 229 ~~~~~~~~k~i~l~np~NPTG~v~-s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 307 (498)
T 3ihj_A 229 EAKDHCDPKVLCIINPGNPTGQVQ-SRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVE 307 (498)
T ss_dssp HHTTTSEEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCC
T ss_pred hhhccCCCeEEEEECCCCCCCCcC-CHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCcee
Confidence 54222 355555555566677554 567899999999999999999999987644332 1111110 011 11
Q ss_pred h---hchhhhhc--CCcccceeEE---eCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHH-----------HH
Q 010250 335 L---VSFAKALS--SAYMPIGAIL---VSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALK-----------IY 395 (514)
Q Consensus 335 i---v~~sK~l~--gG~~pig~v~---~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~-----------~~ 395 (514)
+ -+|||.+. .| +++|+++ .++++++.+... .....+.+.++++++.++++ .+
T Consensus 308 ~i~~~S~SK~~~G~~G-~R~G~~~~~~~~~~l~~~l~~~--------~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~ 378 (498)
T 3ihj_A 308 LASFHSTSKGYMGECG-YRGGYMEVINLHPEIKGQLVKL--------LSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFS 378 (498)
T ss_dssp EEEEEESSSSTTCCSS-SCCEEEEEESCCHHHHHHHHHH--------HHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHH
T ss_pred EEEEeccccccccCcc-cceEEEEEecCCHHHHHHHHHH--------HhccCCCCHHHHHHHHHHhcCCccCcccHHHHH
Confidence 2 26899995 35 8999998 588998888641 12334556677666655552 22
Q ss_pred hh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeee-EEEEEccCCCCCCCC-CCccchHHH-HHHHHHHCCcEEEe
Q 010250 396 KE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI-LGTEFADNKSPNEPF-PPEWGIGAY-FGAQCEKHGMLVRV 471 (514)
Q Consensus 396 ~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~-~~i~~~~~~~~~~~~-~~~~~~~~~-~~~~l~~~Gv~~~~ 471 (514)
++ +.+.++++++.+++.+.|+++ +.+......|.+ .++.+.......... ......... +...|.++||++.+
T Consensus 379 ~~~~~~~~~l~~~~~~l~~~L~~~---~g~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p 455 (498)
T 3ihj_A 379 REKESVLGNLAKKAKLTEDLFNQV---PGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVP 455 (498)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTS---TTEECCCCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC---CCcEecCCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEe
Confidence 22 345678888888898888875 333333334443 333443110000000 000001222 34556678999987
Q ss_pred e-------C-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250 472 S-------G-DNIMMSPPFIMSPEEVDELISKYGKALKATEER 506 (514)
Q Consensus 472 ~-------g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~ 506 (514)
+ + ..+|++ +..+++++++++++|.+++++..++
T Consensus 456 G~~f~~~~~~~~~Ris--~~~~~e~l~~~i~~L~~~~~~~~~~ 496 (498)
T 3ihj_A 456 GSGFGQREGTYHFRMT--ILPPVEKLKTVLQKVKDFHINFLEK 496 (498)
T ss_dssp GGGTCCCTTCCBEEEE--CCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCCCCCEEEEE--eCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3 1 369999 4689999999999999999887654
No 194
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.80 E-value=7.8e-18 Score=179.02 Aligned_cols=328 Identities=14% Similarity=0.079 Sum_probs=190.4
Q ss_pred chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHh----hcCCCC-ccEEEEEecCCcccceeeeecCCCc
Q 010250 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNN----ALGRPN-KKKFIARQKSYHGSTLIAASLSGLP 218 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~----~~~~~~-~~~ii~~~~~yHG~t~~~~~~s~~~ 218 (514)
....++.++++++++. +.+.++|++|||||+..|++.++.+.. ..+..+ .+..|+.....|.+...+....|..
T Consensus 148 ~le~~~~~~la~l~g~-~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~g 226 (515)
T 2jis_A 148 LMEEEVLRKLRALVGW-SSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLG 226 (515)
T ss_dssp HHHHHHHHHHHHHHTC-SSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHhCC-CCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcCCC
Confidence 3345667778888753 246899999999999999999875421 112100 1214444444566544433332221
Q ss_pred cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHH
Q 010250 219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEK 296 (514)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~ 296 (514)
. ..+..++....++ .+.++|++.+.+. ...++++|++...++..|.+.| +++
T Consensus 227 ~---------~~v~~v~~~~~~~-------------~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~----l~~ 280 (515)
T 2jis_A 227 T---------DSVRVVKADERGK-------------MVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP----LEA 280 (515)
T ss_dssp G---------GGEEEECBCTTSC-------------BCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHH
T ss_pred C---------CcEEEEecCCCCc-------------CCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC----HHH
Confidence 0 0122222221111 1157788877642 1235788888888888898877 999
Q ss_pred HHHHHHhcCCEEEEechhcCcccccccceecccCC-CCchhch--hhhhcCCcccceeEEeCHH--HHHHhhh-ccCCC-
Q 010250 297 VQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI-KPDLVSF--AKALSSAYMPIGAILVSPE--VSEVIHS-QSNTL- 369 (514)
Q Consensus 297 l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv-~pDiv~~--sK~l~gG~~pig~v~~~~~--i~~~l~~-~~~~~- 369 (514)
|.++|++||+++|+|++|+++......+.....++ .+|++++ .|.++++ +++|+++++++ +++.... .....
T Consensus 281 I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p-~g~G~l~~~~~~~~~~~~~~~~~~yl~ 359 (515)
T 2jis_A 281 IADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAG-LQCSALLLQDTSNLLKRCHGSQASYLF 359 (515)
T ss_dssp HHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESCCSCHHHHHHCC------
T ss_pred HHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCC-CCeeEEEEeChHHHHHHHhcCCchhcc
Confidence 99999999999999999997755443333334455 6898876 7998876 58999999876 6554211 00000
Q ss_pred C--c----ccccCCC------CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEE
Q 010250 370 G--S----FSHGFTY------SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTE 437 (514)
Q Consensus 370 ~--~----~~~~~t~------~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~ 437 (514)
+ . ....+++ ....+.+.++++++....-+++.++..++++++.+.|+++.+..++.. .....+.+.
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~--~~~~~v~f~ 437 (515)
T 2jis_A 360 QQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVME--PEFVNVCFW 437 (515)
T ss_dssp ---CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSC--CSSSEEEEE
T ss_pred CCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC--CCeeEEEEE
Confidence 0 0 0000111 112344444555543222235677888889999999987632222221 112334443
Q ss_pred EccCCCCCCCCCCcc-----chHHHHHHHHHHCCcEEEe----eC--CEEEEeC-CCCCCHHHHHHHHHHHHHHHH
Q 010250 438 FADNKSPNEPFPPEW-----GIGAYFGAQCEKHGMLVRV----SG--DNIMMSP-PFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 438 ~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~Gv~~~~----~g--~~iRi~p-~~~~t~e~id~~~~~l~~~l~ 501 (514)
+.+.......-..+. .....+.+.+.+.|++... .+ +.||+++ +..+|++||++++++|+++++
T Consensus 438 ~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~ 513 (515)
T 2jis_A 438 FVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQ 513 (515)
T ss_dssp ECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred EeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 322100000000010 0122366788889976532 12 4699999 788999999999999988764
No 195
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.80 E-value=1.2e-18 Score=178.81 Aligned_cols=281 Identities=16% Similarity=0.163 Sum_probs=175.3
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCccccee---eeecCCCcc
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI---AASLSGLPA 219 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~---~~~~s~~~~ 219 (514)
.+...+++++|+++++ .+++++++||+||++.+++ .. ..+++||+.++.||+.... .+...|.
T Consensus 54 ~~~~~~lr~~la~~~g---~~~~i~~~sGt~a~~~al~-~~--------~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~-- 119 (393)
T 1n8p_A 54 NPNRENLERAVAALEN---AQYGLAFSSGSATTATILQ-SL--------PQGSHAVSIGDVYGGTHRYFTKVANAHGV-- 119 (393)
T ss_dssp CHHHHHHHHHHHHHTT---CSEEEEESCHHHHHHHHHH-TS--------CSSCEEEEESSCCHHHHHHHHHTSTTTCS--
T ss_pred ChhHHHHHHHHHHHhC---CCcEEEECChHHHHHHHHH-Hc--------CCCCEEEEeCCCchHHHHHHHHHHHHcCc--
Confidence 4556788999999873 3478888999999999998 42 2346899999999874321 1111111
Q ss_pred ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHH
Q 010250 220 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA 299 (514)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~ 299 (514)
.+..++. .+ +++++++. +++++|+++++++++|.+.+ +++|.+
T Consensus 120 ----------~v~~v~~------------------~d-~~l~~~i~----~~t~lv~~~~~~nptG~~~~----l~~i~~ 162 (393)
T 1n8p_A 120 ----------ETSFTND------------------LL-NDLPQLIK----ENTKLVWIETPTNPTLKVTD----IQKVAD 162 (393)
T ss_dssp ----------CCEEESS------------------HH-HHHHHHSC----SSEEEEEECSSCTTTCCCCC----HHHHHH
T ss_pred ----------EEEEeCC------------------Ch-HHHHHhcc----cCceEEEEECCCCCcceecC----HHHHHH
Confidence 0111110 03 55666553 46889999999999999887 999999
Q ss_pred HHHhc----CCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccc-eeEEeC-HHHHHHhhhccCCCCc
Q 010250 300 VVKKY----DILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPI-GAILVS-PEVSEVIHSQSNTLGS 371 (514)
Q Consensus 300 l~~~~----gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pi-g~v~~~-~~i~~~l~~~~~~~~~ 371 (514)
+|++| |+++|+||+|+++.+ .... ...+|++ +++|.++++++++ |+++++ +++++.+....
T Consensus 163 la~~~~~~~~~~livD~a~~~~~~-~~~~-----~~~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~----- 231 (393)
T 1n8p_A 163 LIKKHAAGQDVILVVDNTFLSPYI-SNPL-----NFGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQ----- 231 (393)
T ss_dssp HHHHHTTTTTCEEEEECTTTHHHH-CCGG-----GGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHH-----
T ss_pred HHHHhCCCCCCEEEEeCCcccccc-CCHH-----HcCCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHH-----
Confidence 99999 999999999986543 2221 1236777 6889999755788 888885 78888776421
Q ss_pred ccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC------CCcee----------EEEe-e-eee
Q 010250 372 FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD------SPIIG----------EIRG-T-GLI 433 (514)
Q Consensus 372 ~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~------~~~~~----------~v~g-~-g~~ 433 (514)
..++. ..++..++++..+++.+.. ..++..++.+.+.+.|++... +|.+. ..++ . |.+
T Consensus 232 ~~~g~--~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i 307 (393)
T 1n8p_A 232 NAIGA--IPSPFDAWLTHRGLKTLHL--RVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGM 307 (393)
T ss_dssp HHHCC--CCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSE
T ss_pred HhcCC--CCCHHHHHHHHhccchHHH--HHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccE
Confidence 11222 3357777777777765432 233344444555555543210 11110 0123 5 778
Q ss_pred EEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE----------e------------------eCCEEEEeCCCCCC
Q 010250 434 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----------V------------------SGDNIMMSPPFIMS 485 (514)
Q Consensus 434 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----------~------------------~g~~iRi~p~~~~t 485 (514)
++|.+.... .....+...+...++.+. | ..+.||++.....+
T Consensus 308 ~~~~l~~~~----------~~~~~~l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~ 377 (393)
T 1n8p_A 308 ISFRIKGGA----------EAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDT 377 (393)
T ss_dssp EEEEESSCH----------HHHHHHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCH
T ss_pred EEEEeCCcH----------HHHHHHHhhCCcceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCH
Confidence 899886320 013334444332222111 0 02469999999999
Q ss_pred HHHHHHHHHHHHHH
Q 010250 486 PEEVDELISKYGKA 499 (514)
Q Consensus 486 ~e~id~~~~~l~~~ 499 (514)
+++|+.+.++|+++
T Consensus 378 ~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 378 DDLLEDIKQALKQA 391 (393)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999888888754
No 196
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.79 E-value=2.7e-18 Score=176.38 Aligned_cols=336 Identities=13% Similarity=0.058 Sum_probs=193.8
Q ss_pred EEEccCCcccccCCCC--CHHHHHHHHHHHhc-CCccccccccCCchHHHHHHHHHHhcCc-----CCCCeEEE--eCCh
Q 010250 102 YLDSLAGLWCTALGGS--EPRLVAAATAQLNT-LPFYHSFWNRTTKPSLDLAKELLEMFTA-----SKMAKVFF--TNSG 171 (514)
Q Consensus 102 ylD~~s~~~~~~lGh~--~p~v~~A~~~~l~~-~~~~~~~~~~~~~~~~ela~~L~~~~~~-----~~~~~v~~--~~sG 171 (514)
.|||..|......++. .|.+.+++.+.+.. ....+. ......++.+.+++++.. ...+++++ ++||
T Consensus 30 ~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~----~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~ 105 (401)
T 7aat_A 30 KMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYL----PIAGLADFTRASAELALGENSEAFKSGRYVTVQGISG 105 (401)
T ss_dssp CEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCC----CTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHH
T ss_pred ceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCC----CCCCCHHHHHHHHHHhcCCCccccccCceEEEecCcc
Confidence 6888877432333432 34678877776653 111111 111234555666655521 12578877 9999
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCCh
Q 010250 172 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETE 249 (514)
Q Consensus 172 seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 249 (514)
++|+..+++.+..+. ..+++|++.+++|++........ |.... .++.. ..+.
T Consensus 106 ~~al~~~~~~l~~~~-----~~gd~Vlv~~p~~~~~~~~~~~~-g~~~~------------~~~~~~~~~~~-------- 159 (401)
T 7aat_A 106 TGSLRVGANFLQRFF-----KFSRDVYLPKPSWGNHTPIFRDA-GLQLQ------------AYRYYDPKTCS-------- 159 (401)
T ss_dssp HHHHHHHHHHHHHHC-----TTCCEEEEEESCCTTHHHHHHHT-TCEEE------------EEECEETTTTE--------
T ss_pred hHHHHHHHHHHHHhc-----cCCCEEEEcCCCchhHHHHHHHc-CCeeE------------eeeeeccccCc--------
Confidence 999999998765331 22468999999998864332222 21110 11110 0011
Q ss_pred hHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc---ccee
Q 010250 250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT---MFGC 326 (514)
Q Consensus 250 ~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~---~~~~ 326 (514)
.+++++++.+.+. .+++.++++...++++|.+ .+.+.+++|.++|++||+++|+||+|.+|+..+. .+..
T Consensus 160 -----~d~~~l~~~l~~~-~~~~~~v~i~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~ 232 (401)
T 7aat_A 160 -----LDFTGAMEDISKI-PEKSIILLHACAHNPTGVD-PRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWAL 232 (401)
T ss_dssp -----ECHHHHHHHHTTS-CTTCEEEEESSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHH
T ss_pred -----cCHHHHHHHHHhC-CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHH
Confidence 0145566666543 3456777777778888865 4678899999999999999999999998866542 1222
Q ss_pred ccc-CCCCch---hchhhhhcCCcccceeEEe---CHHHH----HHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH-
Q 010250 327 DKY-SIKPDL---VSFAKALSSAYMPIGAILV---SPEVS----EVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI- 394 (514)
Q Consensus 327 ~~~-gv~pDi---v~~sK~l~gG~~pig~v~~---~~~i~----~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~- 394 (514)
..+ +..+++ .++||.++..++++|++++ +++.. ..+.. .....+.+.+..++.++..+++.
T Consensus 233 ~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~ 305 (401)
T 7aat_A 233 RHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKI-------LIRPMYSNPPMNGARIASLILNTP 305 (401)
T ss_dssp HHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHH-------HHHHHHSSCCHHHHHHHHHHHHCH
T ss_pred HHHHhcCCcEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHH-------HHHhccCCCChHHHHHHHHHhCCH
Confidence 211 233444 3789998743389999876 66633 33331 11112333344555555444421
Q ss_pred ------Hh-hccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeee-EEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250 395 ------YK-ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI-LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 466 (514)
Q Consensus 395 ------~~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 466 (514)
.+ -++..++++++++++.+.|+++...+.+......+.+ ..+.+. .+.+...+.++|
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~ll~~~g 370 (401)
T 7aat_A 306 ELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLK---------------PEQVERLTKEFS 370 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCC---------------HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecCCcceEEecCCC---------------HHHHHHHHHhCC
Confidence 11 1345678888888898888876211111111222333 232221 233434456789
Q ss_pred cEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 467 MLVRVSGDNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 467 v~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
|.+.+. +|++... .|+++|++++++|++++
T Consensus 371 i~v~~~---~Ris~~~-~~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 371 IYMTKD---GRISVAG-VASSNVGYLAHAIHQVT 400 (401)
T ss_dssp EECCTT---CEEEGGG-CCTTTHHHHHHHHHHHH
T ss_pred EeccCC---CeEEecc-CChhhHHHHHHHHHHHh
Confidence 998743 6888643 56667999999998875
No 197
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.79 E-value=6.7e-18 Score=175.79 Aligned_cols=333 Identities=14% Similarity=0.104 Sum_probs=199.1
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT 177 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~ 177 (514)
+|+.+|.|.... -+|++.+++.+++....++ +.+...++++.|+++++ .+++++++||++|++.
T Consensus 29 ~~~~~i~~~~~~-------~~~~~~~a~~~~~~~~~~~------~~~~~~~l~~~la~~~g---~~~~i~~~sGt~a~~~ 92 (437)
T 3bb8_A 29 AGKSVVPPSGKV-------IGTKELQLMVEASLDGWLT------TGRFNDAFEKKLGEYLG---VPYVLTTTSGSSANLL 92 (437)
T ss_dssp TTTSCBCSCCCC-------CCHHHHHHHHHHHHHCCCB------SCHHHHHHHHHHHHHHT---CSEEEEESCHHHHHHH
T ss_pred CCCccccCCCCC-------CCHHHHHHHHHHHHcCCcC------CChHHHHHHHHHHHHHC---CCcEEEeCCHHHHHHH
Confidence 466666653221 1589999999998764322 33567889999999984 3479999999999999
Q ss_pred HHHHHHHHHhh-cCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHH
Q 010250 178 QVKLVWYYNNA-LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTR 255 (514)
Q Consensus 178 Alk~a~~~~~~-~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 255 (514)
+++.+..+... ..-..+++|++..++|++....... .|.... .++.. ..|..
T Consensus 93 al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~~~-~g~~~~------------~v~~~~~~~~~------------- 146 (437)
T 3bb8_A 93 ALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPTIQ-NGLIPV------------FVDVDIPTYNV------------- 146 (437)
T ss_dssp HHHHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHHHH-TTCEEE------------ECCEETTTTEE-------------
T ss_pred HHHHhhhcccccccCCCcCEEEECCCCcHHHHHHHHH-cCCEEE------------EEeccCccCCc-------------
Confidence 99876211000 0012346899999999887543332 221110 01110 00110
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCc
Q 010250 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPD 334 (514)
Q Consensus 256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pD 334 (514)
++++|++.+. +++++|++... .|...+ +++|.++|++||+++|+||+|+ |....+ ..++..+|
T Consensus 147 d~~~l~~~i~----~~~~~v~~~~~---~g~~~~----~~~i~~l~~~~~~~li~D~a~~~g~~~~~-----~~~~~~~d 210 (437)
T 3bb8_A 147 NASLIEAAVS----DKTKAIMIAHT---LGNLFD----LAEVRRVADKYNLWLIEDCCDALGSTYDG-----KMAGTFGD 210 (437)
T ss_dssp CGGGHHHHCC----TTEEEEEEECG---GGCCCC----HHHHHHHHHHHTCEEEEECTTCTTCEETT-----EETTSSSS
T ss_pred CHHHHHHhcC----CCCeEEEEeCC---CCChhc----HHHHHHHHHHcCCEEEEECccccCceECC-----eecccccC
Confidence 1356666553 34666666322 233333 9999999999999999999998 332211 23444478
Q ss_pred hhch----hhhhcCCcccceeEEeCHHHHHH-hhh---ccCC----------------------CCcc-------cccCC
Q 010250 335 LVSF----AKALSSAYMPIGAILVSPEVSEV-IHS---QSNT----------------------LGSF-------SHGFT 377 (514)
Q Consensus 335 iv~~----sK~l~gG~~pig~v~~~~~i~~~-l~~---~~~~----------------------~~~~-------~~~~t 377 (514)
++++ +|+|+|| ..|+++++++.+.. +.. .... ...+ ..++.
T Consensus 211 ~~~~s~~~~k~l~~g--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 288 (437)
T 3bb8_A 211 IGTVSFYPAKHITMG--EGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYN 288 (437)
T ss_dssp EEEEECSTTSSSCCS--SCEEEEESCHHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCB
T ss_pred EEEEECcCCcCCCCC--CeEEEEeCCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccCcc
Confidence 8644 3678664 57888888554333 221 0000 0000 02223
Q ss_pred CCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEE---Eeeee-eEEEEEccCCCCCCCCCCccc
Q 010250 378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI---RGTGL-ILGTEFADNKSPNEPFPPEWG 453 (514)
Q Consensus 378 ~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v---~g~g~-~~~i~~~~~~~~~~~~~~~~~ 453 (514)
+..+++.+++++++|+.+ ++..++.+++.+++++.|+++......... +..+. .+.+.+......
T Consensus 289 ~~~~~~~aa~~l~~l~~~--~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 357 (437)
T 3bb8_A 289 LKITDMQAACGLAQLERI--EEFVEKRKANFKYLKDALQSCADFIELPEATENSDPSWFGFPITLKEDSGV--------- 357 (437)
T ss_dssp CCCBHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHGGGGTTTEECCCCCTTEECCCSSEEEEECGGGSS---------
T ss_pred cCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhccCCccccCCCCCCCceeeEEEEEEECCcCcC---------
Confidence 345688898898888765 345666688888999998876221111000 01121 122333221000
Q ss_pred hHHHHHHHHHHCCcEEEeeC-----------------------------CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 454 IGAYFGAQCEKHGMLVRVSG-----------------------------DNIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 454 ~~~~~~~~l~~~Gv~~~~~g-----------------------------~~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
....+.+.|.++||.++... +.||++....+|++||++++++|+++++
T Consensus 358 ~~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 358 SRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp CHHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 14568889999999987431 1389998889999999999999988754
No 198
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.79 E-value=6.5e-18 Score=175.67 Aligned_cols=284 Identities=16% Similarity=0.130 Sum_probs=180.4
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCccccee---eeecCCCc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI---AASLSGLP 218 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~---~~~~s~~~ 218 (514)
..+...+++++|+++++ .++.++++||++|+..+++... ..+++||+.++.|++.... .+...|..
T Consensus 112 ~~~~~~~l~~~lA~l~g---~~~~v~~~sG~~Ai~~al~~l~--------~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~ 180 (445)
T 1qgn_A 112 GNPTTVVLEEKISALEG---AESTLLMASGMCASTVMLLALV--------PAGGHIVTTTDCYRKTRIFIETILPKMGIT 180 (445)
T ss_dssp CCHHHHHHHHHHHHHHT---CSEEEEESCHHHHHHHHHHHHS--------CSSCEEEEETTSCHHHHHHHHHTGGGGTCE
T ss_pred CChHHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHHh--------CCCCEEEEcCCCchhHHHHHHHHHHHcCCE
Confidence 45667889999999874 3477888999999999998653 2346899999888774321 11111111
Q ss_pred cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250 219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 298 (514)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~ 298 (514)
+..++.. +++++++.+.. +++++|++|++++++|.+.+ +++|.
T Consensus 181 ------------v~~v~~~------------------d~~~l~~ai~~---~tv~lV~le~p~NptG~v~d----l~~I~ 223 (445)
T 1qgn_A 181 ------------ATVIDPA------------------DVGALELALNQ---KKVNLFFTESPTNPFLRCVD----IELVS 223 (445)
T ss_dssp ------------EEEECSS------------------CHHHHHHHHHH---SCEEEEEEESSCTTTCCCCC----HHHHH
T ss_pred ------------EEEeCCC------------------CHHHHHHHhcc---CCCCEEEEeCCCCCCCcccC----HHHHH
Confidence 1111110 15778888763 34489999999999999887 99999
Q ss_pred HHHHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCc-ccceeEEeCHHHHHHhhhccCCCCccccc
Q 010250 299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAY-MPIGAILVSPEVSEVIHSQSNTLGSFSHG 375 (514)
Q Consensus 299 ~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~-~pig~v~~~~~i~~~l~~~~~~~~~~~~~ 375 (514)
++|++||+++|+||+|+.. .. .......+|+++ ++|.++|++ .++|++++++++++.+... ...
T Consensus 224 ~la~~~g~~livD~a~~~~-~~-----~~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~-------~~~ 290 (445)
T 1qgn_A 224 KLCHEKGALVCIDGTFATP-LN-----QKALALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNL-------HHI 290 (445)
T ss_dssp HHHHHTTCEEEEECTTTCT-TT-----CCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHH-------HHH
T ss_pred HHHHHcCCEEEEECCCccc-cc-----CCccccCCEEEEECCcccccccccceEEEEEECHHHHHHHHHH-------HHH
Confidence 9999999999999999732 11 122345678885 789998742 3689999999998887632 111
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-----CCce----------eEEEeeeeeEEEEEcc
Q 010250 376 FTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPII----------GEIRGTGLILGTEFAD 440 (514)
Q Consensus 376 ~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~----------~~v~g~g~~~~i~~~~ 440 (514)
.....+|+.+..++..++.+.. ..++..++.+++.+.|++... +|.. ...++.|.++.|.+..
T Consensus 291 ~g~~~~~~~a~~~~~~l~~l~~--r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~ 368 (445)
T 1qgn_A 291 LGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDG 368 (445)
T ss_dssp HCCCCCHHHHHHHHHHGGGHHH--HHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESS
T ss_pred hCCCCCHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECC
Confidence 1223467777766666665432 234445556666666665411 1110 1123578899999864
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHCCcEEEe----------------------------eCCEEEEeCCCCCCHHHHHHH
Q 010250 441 NKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV----------------------------SGDNIMMSPPFIMSPEEVDEL 492 (514)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~----------------------------~g~~iRi~p~~~~t~e~id~~ 492 (514)
.. .....+...|...++.++. ..+.|||+.. .||++.+
T Consensus 369 ~~----------~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG----~Edid~l 434 (445)
T 1qgn_A 369 DL----------LTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG----VEDFDDL 434 (445)
T ss_dssp CH----------HHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC----SSCHHHH
T ss_pred CH----------HHHHHHHHhCCCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHH
Confidence 21 0123343433312221110 1257999943 5789999
Q ss_pred HHHHHHHHHH
Q 010250 493 ISKYGKALKA 502 (514)
Q Consensus 493 ~~~l~~~l~~ 502 (514)
++.|++++++
T Consensus 435 i~~L~~al~~ 444 (445)
T 1qgn_A 435 KADILQALDS 444 (445)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999998864
No 199
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.79 E-value=7.8e-19 Score=183.89 Aligned_cols=282 Identities=18% Similarity=0.222 Sum_probs=179.3
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCccccee---eeecCCCcc
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI---AASLSGLPA 219 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~---~~~~s~~~~ 219 (514)
.+...+++++++++++ .++++++++|++|+..+++++ ..+++||+.++.||+.... .....|..
T Consensus 132 ~~~~~~l~~~la~~~g---~~~~i~~~sGt~al~~~l~~~---------~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~- 198 (464)
T 1ibj_A 132 NPTRDALESLLAKLDK---ADRAFCFTSGMAALSAVTHLI---------KNGEEIVAGDDVYGGSDRLLSQVVPRSGVV- 198 (464)
T ss_dssp CHHHHHHHHHHHHHHT---CSEEEEESSHHHHHHHHHTTS---------CTTCEEEEESSCCHHHHHHHHHTSGGGTCE-
T ss_pred CHHHHHHHHHHHHHhC---CCeEEEECCHHHHHHHHHHHh---------CCCCEEEEECCCchhHHHHHHHHHHHcCCE-
Confidence 4467889999999873 458899999999998887532 3356899999999886321 01111111
Q ss_pred ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHH
Q 010250 220 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA 299 (514)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~ 299 (514)
+..++.. +.++|++.+. +++++|+++++++.+|.+.+ +++|.+
T Consensus 199 -----------v~~v~~~------------------d~~~l~~~i~----~~tk~v~l~~p~NptG~v~~----l~~i~~ 241 (464)
T 1ibj_A 199 -----------VKRVNTT------------------KLDEVAAAIG----PQTKLVWLESPTNPRQQISD----IRKISE 241 (464)
T ss_dssp -----------EEEECTT------------------SHHHHHHHCC----SSEEEEEECSSCTTTCCCCC----HHHHHH
T ss_pred -----------EEEeCCC------------------CHHHHHHHhc----cCceEEEEeCCCCCCCEeec----HHHHHH
Confidence 1111110 1467776664 46899999999999998886 999999
Q ss_pred HHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCC-cccceeEEeC-HHHHHHhhhccCCCCccccc
Q 010250 300 VVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSA-YMPIGAILVS-PEVSEVIHSQSNTLGSFSHG 375 (514)
Q Consensus 300 l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG-~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~ 375 (514)
+|++||+++|+||+|+. |.... ..+ ..+|++ +++|.++|+ ++++|+++++ +++++.+... ...
T Consensus 242 la~~~gi~livDea~~~-g~~~~--~~~---~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~-------~~~ 308 (464)
T 1ibj_A 242 MAHAQGALVLVDNSIMS-PVLSR--PLE---LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFL-------QNS 308 (464)
T ss_dssp HHHTTTCEEEEECTTTC-TTTCC--GGG---TTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHH-------HHH
T ss_pred HHHHcCCEEEEECCCcc-cccCC--hhh---cCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHH-------HHh
Confidence 99999999999999973 22111 112 346777 588999872 2688999998 4787777531 111
Q ss_pred CCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHhhh-------hhccCCCcee----EEEeeeeeEEEEEccCC
Q 010250 376 FTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDGV-------KAFSDSPIIG----EIRGTGLILGTEFADNK 442 (514)
Q Consensus 376 ~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L-------~~l~~~~~~~----~v~g~g~~~~i~~~~~~ 442 (514)
..++.+++++.++.++++.+.. +...+++....+++++.- ..+..+|.+. ..++.|.++.+++.+.
T Consensus 309 ~g~~~~~~~~~a~~~al~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~~- 387 (464)
T 1ibj_A 309 EGSGLAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSV- 387 (464)
T ss_dssp TTCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSCH-
T ss_pred cCCCCCHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECCH-
Confidence 2334578888888887764321 222344444455554321 1122222111 1234677888887310
Q ss_pred CCCCCCCCccchHHHHHHHHHHCCcEEEee----------------------------CCEEEEeCCCCCCHHHHHHHHH
Q 010250 443 SPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------------------------GDNIMMSPPFIMSPEEVDELIS 494 (514)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------------------------g~~iRi~p~~~~t~e~id~~~~ 494 (514)
.....+.+.|...|+.++.+ .+.|||++++ ||++++++
T Consensus 388 ----------~~~~~~~~~L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~----edi~~li~ 453 (464)
T 1ibj_A 388 ----------ALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI----EDVDDLIS 453 (464)
T ss_dssp ----------HHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS----SCHHHHHH
T ss_pred ----------HHHHHHHHhcCcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC----CCHHHHHH
Confidence 01334666665566655432 2469999775 89999999
Q ss_pred HHHHHHHH
Q 010250 495 KYGKALKA 502 (514)
Q Consensus 495 ~l~~~l~~ 502 (514)
.|++++++
T Consensus 454 ~L~~al~~ 461 (464)
T 1ibj_A 454 DLDIAFKT 461 (464)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHhh
Confidence 99998864
No 200
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.79 E-value=1.6e-17 Score=176.22 Aligned_cols=328 Identities=13% Similarity=0.082 Sum_probs=188.2
Q ss_pred HHHHHHHHHHhcCcCC-CCeEEEeCChhHHHHHHHHHHHHHHh----hcCCC-CccEEEEEecCCcccceeeeecCCCcc
Q 010250 146 SLDLAKELLEMFTASK-MAKVFFTNSGSEANDTQVKLVWYYNN----ALGRP-NKKKFIARQKSYHGSTLIAASLSGLPA 219 (514)
Q Consensus 146 ~~ela~~L~~~~~~~~-~~~v~~~~sGseA~~~Alk~a~~~~~----~~~~~-~~~~ii~~~~~yHG~t~~~~~~s~~~~ 219 (514)
..++.++++++++... .+.++|++|||||+..|++.++.+.. ..|.. .++.+|+.....|.+...+....+...
T Consensus 134 e~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g~g~ 213 (504)
T 2okj_A 134 EQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGT 213 (504)
T ss_dssp HHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCG
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHHcCCCc
Confidence 3445577788774321 46899999999999999999875321 11100 012234444445554433332222100
Q ss_pred ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHHH
Q 010250 220 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKV 297 (514)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~l 297 (514)
..+..++....++. ++++|++.+.+. ...++++|++...++..|.+.| +++|
T Consensus 214 ---------~~v~~v~~~~~~~~-------------d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~----l~~I 267 (504)
T 2okj_A 214 ---------DNVILIKCNERGKI-------------IPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP----IQEI 267 (504)
T ss_dssp ---------GGEEEECBCTTSCB-------------CHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC----HHHH
T ss_pred ---------ccEEEEecCCCCCC-------------CHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC----HHHH
Confidence 01122222211111 157788877642 1225788888888788888876 9999
Q ss_pred HHHHHhcCCEEEEechhcCcccccccceecccCC-CCchhchh--hhhcCCcccceeEEeCH-HHHHHhhhccCCCCccc
Q 010250 298 QAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI-KPDLVSFA--KALSSAYMPIGAILVSP-EVSEVIHSQSNTLGSFS 373 (514)
Q Consensus 298 ~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv-~pDiv~~s--K~l~gG~~pig~v~~~~-~i~~~l~~~~~~~~~~~ 373 (514)
.++|++||+++++|++|.|+......+.....++ .+|+++++ |.++++ +++|++++++ +++........ .+.
T Consensus 268 ~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p-~~~g~l~~~~~~~~~~~~~~~~---~~l 343 (504)
T 2okj_A 268 ADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMCA---GYL 343 (504)
T ss_dssp HHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCC---SSS
T ss_pred HHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCC-cceEEEEEECHHHHHHHhcCCC---ccc
Confidence 9999999999999999997644322222233344 57888765 988877 6899999976 46554221100 111
Q ss_pred c-cCC----------------CCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEE
Q 010250 374 H-GFT----------------YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGT 436 (514)
Q Consensus 374 ~-~~t----------------~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i 436 (514)
. +.+ ...+.+.+.++++++..-.-+++.++..++++++.+.|+++.+..++........++.+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f 423 (504)
T 2okj_A 344 FQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCF 423 (504)
T ss_dssp CCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEE
T ss_pred cCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEE
Confidence 0 000 11235666666555542222346777888889999988775222222110123344455
Q ss_pred EEccCCCCCCCCCCc-----cchHHHHHHHHHHCCcE-EE--ee-C--CEEEEeCC-CCCCHHHHHHHHHHHHHHHHHH
Q 010250 437 EFADNKSPNEPFPPE-----WGIGAYFGAQCEKHGML-VR--VS-G--DNIMMSPP-FIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 437 ~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~Gv~-~~--~~-g--~~iRi~p~-~~~t~e~id~~~~~l~~~l~~~ 503 (514)
.+.+..........+ ......+.+.|.++|++ +. +. + +.+|+++. ..+|++||++++++|+++++++
T Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 424 WYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 502 (504)
T ss_dssp EECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC-
T ss_pred EEeCccccccccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 443211000000000 01245677889999964 33 22 3 36999985 7789999999999999887543
No 201
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.78 E-value=7.2e-18 Score=173.66 Aligned_cols=282 Identities=15% Similarity=0.135 Sum_probs=178.4
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCcc
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPA 219 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~~ 219 (514)
++...++++.|+++++. +..++++||++|+..+++ .. ..+++||+.++.|++..... ....|..
T Consensus 66 ~p~~~~l~~~la~~~g~---~~~i~~~sG~~ai~~~~~-l~--------~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~- 132 (403)
T 3cog_A 66 NPTRNCLEKAVAALDGA---KYCLAFASGLAATVTITH-LL--------KAGDQIICMDDVYGGTNRYFRQVASEFGLK- 132 (403)
T ss_dssp CHHHHHHHHHHHHHHTC---SEEEEESCHHHHHHHHHT-TS--------CTTCEEEEESSCCHHHHHHHHHTGGGGTCE-
T ss_pred CchHHHHHHHHHHHhCC---CcEEEECCHHHHHHHHHH-Hh--------CCCCEEEEeCCCcchHHHHHHHHHHHcCCE-
Confidence 45567899999998742 367778889999999987 42 33568999999998843211 1111111
Q ss_pred ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHH
Q 010250 220 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA 299 (514)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~ 299 (514)
+..++.. +.+++++.+. +++++|++|++++++|.+.+ +++|.+
T Consensus 133 -----------v~~v~~~------------------d~~~l~~~i~----~~t~~v~~~~p~nptG~~~~----l~~i~~ 175 (403)
T 3cog_A 133 -----------ISFVDCS------------------KIKLLEAAIT----PETKLVWIETPTNPTQKVID----IEGCAH 175 (403)
T ss_dssp -----------EEEECTT------------------SHHHHHHHCC----TTEEEEEEESSCTTTCCCCC----HHHHHH
T ss_pred -----------EEEECCC------------------CHHHHHHhcC----cCCeEEEEECCCCCCCeeeC----HHHHHH
Confidence 1111110 1466666654 46889999999999999887 999999
Q ss_pred HHHhcC-CEEEEechhcCcccccccceecccCCCCchh--chhhhhcC-CcccceeEEeC-HHHHHHhhhccCCCCcccc
Q 010250 300 VVKKYD-ILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSS-AYMPIGAILVS-PEVSEVIHSQSNTLGSFSH 374 (514)
Q Consensus 300 l~~~~g-illI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~g-G~~pig~v~~~-~~i~~~l~~~~~~~~~~~~ 374 (514)
+|++|| +++|+||+|+++. .+.. .+..+|++ +++|.++| |..++|+++++ +++++.+... ..
T Consensus 176 la~~~g~~~livD~~~~~~~-~~~~-----~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~-------~~ 242 (403)
T 3cog_A 176 IVHKHGDIILVVDNTFMSPY-FQRP-----LALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFL-------QN 242 (403)
T ss_dssp HHTSSSCCEEEEECTTTCTT-TCCT-----TTTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHH-------HH
T ss_pred HHHHcCCCEEEEECCCcccc-cCCc-----cccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHH-------HH
Confidence 999999 9999999998542 2221 22457877 68899987 32468999984 7888877631 23
Q ss_pred cCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHhh--h-----hhccCCCcee----EEEeeeeeEEEEEccC
Q 010250 375 GFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDG--V-----KAFSDSPIIG----EIRGTGLILGTEFADN 441 (514)
Q Consensus 375 ~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~--L-----~~l~~~~~~~----~v~g~g~~~~i~~~~~ 441 (514)
..+...+|+.+.++..+++.+.. +...++.....+++.+. + ..+..+|... ..++.|.++.+.+...
T Consensus 243 ~~g~~~~~~~~~~~~~~l~~l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~~ 322 (403)
T 3cog_A 243 SLGAVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGT 322 (403)
T ss_dssp HHCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSC
T ss_pred hcCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecCC
Confidence 33455688888888877765432 22233344444444332 0 0111222111 1235688888887531
Q ss_pred CCCCCCCCCccchHHHHHHHHHHCCcEEEe---e----------------------------CCEEEEeCCCCCCHHHHH
Q 010250 442 KSPNEPFPPEWGIGAYFGAQCEKHGMLVRV---S----------------------------GDNIMMSPPFIMSPEEVD 490 (514)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~---~----------------------------g~~iRi~p~~~~t~e~id 490 (514)
.......+.+.|+++.. + .+.||+++.+..++++|+
T Consensus 323 -------------~~~~~~~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~ 389 (403)
T 3cog_A 323 -------------LQHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLE 389 (403)
T ss_dssp -------------HHHHHHHHHHCSSSEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHH
T ss_pred -------------HHHHHHHHHhCCcceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHH
Confidence 12244556677775431 0 256999988877777777
Q ss_pred HHHHHHHHHH
Q 010250 491 ELISKYGKAL 500 (514)
Q Consensus 491 ~~~~~l~~~l 500 (514)
.+.++|++++
T Consensus 390 ~l~~al~~~~ 399 (403)
T 3cog_A 390 DLDQALKAAH 399 (403)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhh
Confidence 7776666543
No 202
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.77 E-value=1.8e-16 Score=165.73 Aligned_cols=344 Identities=11% Similarity=0.037 Sum_probs=194.3
Q ss_pred CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCC-----eEEEeCChhHHHHHHHHHHHHHHhh---
Q 010250 117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMA-----KVFFTNSGSEANDTQVKLVWYYNNA--- 188 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~-----~v~~~~sGseA~~~Alk~a~~~~~~--- 188 (514)
.+|.+.+++.+.++........+........++.++++++++. +.+ .+++++||+||+..++..++.....
T Consensus 54 ~~~~v~e~~~~a~~~~~~~~~~~~~~~~l~~~~~~~la~l~g~-~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~ 132 (452)
T 2dgk_A 54 DDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHA-PAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRME 132 (452)
T ss_dssp CCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTC-CCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHhccCCCChhhChhHHHHHHHHHHHHHHHhCC-CcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999998888653222111112234455677777888743 222 4899999999999999887642211
Q ss_pred -cCCC-CccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC-cccCCCCCCChhHHHHHHHHHHHHHHH
Q 010250 189 -LGRP-NKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGETEEEYSTRLANNLEDLIL 265 (514)
Q Consensus 189 -~~~~-~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~le~li~ 265 (514)
.|.+ .+.+||+.+ .|.....+....|... ..++... .|+. ++++|++.+.
T Consensus 133 ~~G~~~~~~~vi~~~--~h~~~~~~~~~~G~~v------------~~v~~~~~~~~~-------------d~~~l~~~i~ 185 (452)
T 2dgk_A 133 AAGKPTDKPNLVCGP--VQICWHKFARYWDVEL------------REIPMRPGQLFM-------------DPKRMIEACD 185 (452)
T ss_dssp HTTCCCSCCEEEESS--CCHHHHHHHHHTTCEE------------EECCCBTTBCSC-------------CHHHHHHHCC
T ss_pred hcCCCCCCcEEEECC--CcHHHHHHHHHcCceE------------EEEecCCCCCeE-------------CHHHHHHHHh
Confidence 1211 134666655 6665433333333211 1111111 1111 1467777664
Q ss_pred HhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc------CCEEEEechhcCccc--ccccceecccCC-CCchh
Q 010250 266 KEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY------DILFIADEVICAFGR--LGTMFGCDKYSI-KPDLV 336 (514)
Q Consensus 266 ~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~------gillI~DEv~tG~gr--~G~~~~~~~~gv-~pDiv 336 (514)
+++.+|++...++..|.+.| +++|.++|++| |+++++|++|.++.. ........ +.+ ..|.+
T Consensus 186 ----~~t~~v~~~~~~n~tG~~~~----l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~d~~ 256 (452)
T 2dgk_A 186 ----ENTIGVVPTFGVTYTGNYEF----PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWD-FRLPRVKSI 256 (452)
T ss_dssp ----TTEEEEECBBSCTTTCBBCC----HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCS-TTSTTEEEE
T ss_pred ----hCCEEEEEEcCCcCCcccCC----HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhh-cCCCCCcEE
Confidence 34666776666667888876 99999999996 999999999987532 11111111 111 24666
Q ss_pred ch--hhhhcCCcccceeEEeCHH-HH-HHhhhccCCCCccc----ccCCCCC-cHHHHHHHHHHHHHHhhccHHHHHHHH
Q 010250 337 SF--AKALSSAYMPIGAILVSPE-VS-EVIHSQSNTLGSFS----HGFTYSG-HPVSCAVAIEALKIYKERNIVEQVNKI 407 (514)
Q Consensus 337 ~~--sK~l~gG~~pig~v~~~~~-i~-~~l~~~~~~~~~~~----~~~t~~~-~pl~~aaa~aal~~~~~~~~~~~~~~~ 407 (514)
++ .|.+.+| +++|+++++++ ++ +.+.......+... ..++..+ ..+++.+++..+..-.-++..++..++
T Consensus 257 ~~~~hK~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~ 335 (452)
T 2dgk_A 257 SASGHKFGLAP-LGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQV 335 (452)
T ss_dssp EEETTTTTCCC-SSCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECcccccCCC-CCeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 55 4855555 78999999653 33 44321111111000 0011111 233333343333211113456777888
Q ss_pred HHHHHhhhhhccCCCceeEEE--eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe----e----CCEEE
Q 010250 408 APKFQDGVKAFSDSPIIGEIR--GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV----S----GDNIM 477 (514)
Q Consensus 408 ~~~l~~~L~~l~~~~~~~~v~--g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~----~----g~~iR 477 (514)
++++.+.|+++....++.... ....++.+.+.+.... .. ....+.+.|.++|+.+.. . ...+|
T Consensus 336 a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~~~------~~-~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lR 408 (452)
T 2dgk_A 336 AAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDP------GY-TLYDLSERLRLRGWQVPAFTLGGEATDIVVMR 408 (452)
T ss_dssp HHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTCCC------SC-CHHHHHHHHHHTTCBCCEEECSTTCTTCEEEE
T ss_pred HHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCcccc------cC-CHHHHHHHHHhcCCeeeeeeCCcccCCeEEEE
Confidence 888888888762221111100 2345666666532100 00 135688899999996542 1 13699
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 478 MSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 478 i~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
++.....|++|++++++.|+++++.+.+
T Consensus 409 is~~~~~t~e~id~li~~l~~~~~~~~~ 436 (452)
T 2dgk_A 409 IMCRRGFEMDFAELLLEDYKASLKYLSD 436 (452)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9988888999999999999999876654
No 203
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.76 E-value=1.3e-18 Score=181.56 Aligned_cols=290 Identities=13% Similarity=0.049 Sum_probs=175.9
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 221 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~ 221 (514)
+.....++.+.+++ ++. + +.+++++||++|+..+++.+. .++++|++.+++|++........+..+.+.
T Consensus 55 ~~~~~~~~~~~la~-~g~-~-~~v~~~~G~t~a~~~~~~a~~--------~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v 123 (446)
T 2x3l_A 55 PEEVILKSMKQVEK-HSD-Y-DGYFLVNGTTSGILSVIQSFS--------QKKGDILMARNVHKSVLHALDISQQEGHFI 123 (446)
T ss_dssp CSSHHHHHHHHHCS-CTT-E-EEEEESSHHHHHHHHHHHTTT--------TSSSCEEECTTCCHHHHHHHHHHTCCEEEC
T ss_pred cchHHHHHHHHHHh-cCC-C-ceEEEeCCHHHHHHHHHHHhc--------CCCCEEEEecCccHHHHHHHHHcCCeEEEE
Confidence 34455677888888 742 2 578899999999999998763 345678888888776543332222221110
Q ss_pred CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250 222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 301 (514)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~ 301 (514)
. ......|. ... ..+.++| + . .++++|++.+ ++..|.+.+ +++|.++|
T Consensus 124 ~-----------~~~~~~~~--~~~-------~~d~~~l---~---~-~~~~~v~~~~-~n~~G~~~~----l~~I~~l~ 171 (446)
T 2x3l_A 124 E-----------THQSPLTN--HYN-------KVNLSRL---N---N-DGHKLVVLTY-PNYYGETFN----VEEVIKSL 171 (446)
T ss_dssp E-----------EEECTTTS--SEE-------EEEC--------------CCEEEEES-SCTTSCCCC----HHHHHHHH
T ss_pred e-----------CeeccccC--cCC-------CCCHHHH---c---C-CCceEEEEEC-CCCCeEecC----HHHHHHHH
Confidence 0 00000000 000 0001222 1 1 2455666666 455788876 99999999
Q ss_pred HhcCCEEEEechhcC-cccccccceecccCCCCchhch--hhhhcCCcccceeEEeCHHHHH--HhhhccCCCCcccccC
Q 010250 302 KKYDILFIADEVICA-FGRLGTMFGCDKYSIKPDLVSF--AKALSSAYMPIGAILVSPEVSE--VIHSQSNTLGSFSHGF 376 (514)
Q Consensus 302 ~~~gillI~DEv~tG-~gr~G~~~~~~~~gv~pDiv~~--sK~l~gG~~pig~v~~~~~i~~--~l~~~~~~~~~~~~~~ 376 (514)
++||+++|+||+|++ +...+. ........+|+++. +|.++++ .++|++++++++++ .+... .....
T Consensus 172 ~~~~~~livDea~~~~~~f~~~--~~~~~~~g~Di~~~S~~K~l~~~-~g~g~l~~~~~~i~~~~~~~~------~~~~~ 242 (446)
T 2x3l_A 172 HQLNIPVLIDEAHGAHFGLQGF--PDSTLNYQADYVVQSFHKTLPAL-TMGSVLYIHKNAPYRENIIEY------LSYFQ 242 (446)
T ss_dssp HHTTCCEEEECTTCTTTTSTTS--CCCGGGGTCSEEEECHHHHSSSC-TTCEEEEEETTCTTHHHHHHH------HHHHS
T ss_pred HhcCCeEEEcchhhhhhccCCC--CCChHHcCCCEEEECCccccccc-cccEEEEEcCCcCCHHHHHHH------HHHHc
Confidence 999999999999986 222222 12222233688764 5988876 57899999887654 33210 01112
Q ss_pred CCCCcHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccc
Q 010250 377 TYSGHPVSCAVAIEALKIYKERN---IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWG 453 (514)
Q Consensus 377 t~~~~pl~~aaa~aal~~~~~~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~ 453 (514)
+.+.+...+++..++++.+++.+ +.++..++.+++++. .+ .+.. ...+..+.+.+...
T Consensus 243 ~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~--g~---~~~~--~~~~~~l~i~~~~~------------ 303 (446)
T 2x3l_A 243 TSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK--GF---EMLQ--VDDPLKLLIKYEGF------------ 303 (446)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH--TC---EEEE--CSSTTEEEEECTTS------------
T ss_pred CCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc--CC---EECc--CCCCeEEEEEeCCc------------
Confidence 44456666666667777776532 677777777777765 22 1111 00122344544310
Q ss_pred hHHHHHHHHHHCCcEEE-eeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 454 IGAYFGAQCEKHGMLVR-VSGDNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 454 ~~~~~~~~l~~~Gv~~~-~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
....+.+.|.++||.+. ++.+.+|++++..+|++++ +++++|+++++.+
T Consensus 304 ~~~~l~~~L~~~GI~v~~~g~~~iRi~~~~~~t~e~i-~l~~aL~~~~~~~ 353 (446)
T 2x3l_A 304 TGHDIQNWFMNAHIYLELADDYQALAILPLWHHDDTY-LFDSLLRKIEDMI 353 (446)
T ss_dssp CHHHHHHHHHHTTEEESEECSSCEEEECCCCCTTCCC-CHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHCCCEEEecCCCEEEEEeecCCCHHHH-HHHHHHHHHHHhh
Confidence 14567888999999998 4446799999988999999 9999999887543
No 204
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.74 E-value=5.1e-17 Score=173.53 Aligned_cols=363 Identities=13% Similarity=0.105 Sum_probs=198.5
Q ss_pred EEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHh-cCc----CCCCeEEEeCChhHHHH
Q 010250 102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEM-FTA----SKMAKVFFTNSGSEAND 176 (514)
Q Consensus 102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~-~~~----~~~~~v~~~~sGseA~~ 176 (514)
++||..| ..++.+|.+++++.+++.. ..|... .+..+...++++...+. +.. .+.++|++++|+++|+.
T Consensus 106 ~i~l~~g----~~~~~~~~~~~al~~~~~~-~~Y~~~-~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~ 179 (546)
T 2zy4_A 106 SLSYVRD----QLGLDPAAFLHEMVDGILG-CNYPVP-PRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMA 179 (546)
T ss_dssp HHHHHHH----TSCCCHHHHHHHHHHHHHT-CSCCSS-SSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHH
T ss_pred hhecccC----CCCCCChHHHHHHHHhhhc-CCCCCC-cCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHH
Confidence 4555444 4567888899998888753 222211 12334444555544322 211 13479999999999999
Q ss_pred HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecC-CCccccCCCCCCCCcccccCCC--CcccCCCCCCChhHHH
Q 010250 177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLS-GLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEYS 253 (514)
Q Consensus 177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 253 (514)
.++++.... ... ..++.|++.+++|++....+.... +... ..+++. ..|.
T Consensus 180 ~~~~~l~~~--~l~-~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~------------~~v~~~~~~~~~------------ 232 (546)
T 2zy4_A 180 YIFESLKLN--GLL-KAGDKVAIGMPVFTPYIEIPELAQYALEE------------VAINADPSLNWQ------------ 232 (546)
T ss_dssp HHHHHHHHT--TSS-CTTCEEEEEESCCHHHHHHHHSTTSCCEE------------EEEECBGGGTTB------------
T ss_pred HHHHHhhhh--hcC-CCCCEEEEeCCCCccHHHHHHHcCCCcEE------------EEEecCcccCCC------------
Confidence 999864210 001 234689999999999864432211 1110 111110 0011
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH--HhcCCEEEEechhcCcccccccceecccCC
Q 010250 254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV--KKYDILFIADEVICAFGRLGTMFGCDKYSI 331 (514)
Q Consensus 254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~--~~~gillI~DEv~tG~gr~G~~~~~~~~gv 331 (514)
.++++|++++ . .++.+|++...++++|.+. +.+.+++|.++| ++||+++|+||+|.+|...+........+.
T Consensus 233 -~d~~~l~~~~---~-~~~k~v~l~~p~NPtG~~~-~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~ 306 (546)
T 2zy4_A 233 -YPDSELDKLK---D-PAIKIFFCVNPSNPPSVKM-DQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPEN 306 (546)
T ss_dssp -CCHHHHGGGG---S-TTEEEEEEESSCSSSCBCC-CHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGG
T ss_pred -CCHHHHHHhh---C-CCCeEEEEECCCCCCCccC-CHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCC
Confidence 0135565543 2 3456666555677777655 567899999999 889999999999998854221111111111
Q ss_pred CCchhchhhhhcCCcccceeEEeCHH-HHHHhhhcc------------CC----C-------------CcccccCCCCCc
Q 010250 332 KPDLVSFAKALSSAYMPIGAILVSPE-VSEVIHSQS------------NT----L-------------GSFSHGFTYSGH 381 (514)
Q Consensus 332 ~pDiv~~sK~l~gG~~pig~v~~~~~-i~~~l~~~~------------~~----~-------------~~~~~~~t~~~~ 381 (514)
...+.+|||.++..++++|+++++++ +++.+.... .. + +......+.+.+
T Consensus 307 ~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s 386 (546)
T 2zy4_A 307 TLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLS 386 (546)
T ss_dssp EEEEEESTTTTTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSC
T ss_pred EEEEEeCccccCCCCcceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCC
Confidence 11234789988643389999999875 777663110 00 0 000001123344
Q ss_pred HHHHHH-HHHHH-HHHhh-----ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCC--CCCCCC----
Q 010250 382 PVSCAV-AIEAL-KIYKE-----RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNK--SPNEPF---- 448 (514)
Q Consensus 382 pl~~aa-a~aal-~~~~~-----~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~--~~~~~~---- 448 (514)
.+.+.+ ++.++ ..+++ +.+.+.++++.+.+.+.|. + ++......-|.++++++.... .....+
T Consensus 387 ~~~Q~a~a~~a~~all~~~~~~~~~~r~~~~~r~~~l~~~L~-~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl 462 (546)
T 2zy4_A 387 TPQQVQMALFSLFALMDEADEYKHTLKQLIRRRETTLYRELG-M---PPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWA 462 (546)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHGGGT-S---SCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcC-C---CcccCCCCeeEEEEEEHHHhhcccccHHHHHHh
Confidence 444443 22111 22221 2345556666666666664 2 111111233556677764200 000000
Q ss_pred CCccchHHHHHHHHHHCCcEEEeeC------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 010250 449 PPEWGIGAYFGAQCEKHGMLVRVSG------DNIMMSPPFIMSPEEVDELISKYGKALKATEERVK 508 (514)
Q Consensus 449 ~~~~~~~~~~~~~l~~~Gv~~~~~g------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~~ 508 (514)
.........+.+.+.++||.+.|+. +.+||+.. ..+++++++++++|++++++..++.+
T Consensus 463 ~~~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~~~~~~~ 527 (546)
T 2zy4_A 463 VKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLA-NLNEYEYAAIGRALRKMADELYAEYS 527 (546)
T ss_dssp HHHCCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEEESS-SSCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hccCCHHHHHHHHHHHCCEEEeCccccCCCCCeEEEEec-cCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000012346677889999999852 46999964 45899999999999999887765443
No 205
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.73 E-value=1.3e-15 Score=161.69 Aligned_cols=359 Identities=14% Similarity=0.059 Sum_probs=194.1
Q ss_pred CCHHHH-HHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC-CCCeEEEeCChhHHHHHHHHHHHHHH----hhcC
Q 010250 117 SEPRLV-AAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS-KMAKVFFTNSGSEANDTQVKLVWYYN----NALG 190 (514)
Q Consensus 117 ~~p~v~-~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~-~~~~v~~~~sGseA~~~Alk~a~~~~----~~~~ 190 (514)
.+|.++ +++...++...+.+...........+++++++++++.. +.+.++|++||++|+..|+..++... +..|
T Consensus 107 ~~~~~~~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G 186 (511)
T 3vp6_A 107 DIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKG 186 (511)
T ss_dssp CHHHHHHHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHC
T ss_pred cHHHHHHHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcC
Confidence 345444 55666665433221111111233344556667766432 23589999999999999999887531 1112
Q ss_pred CC-CccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh--
Q 010250 191 RP-NKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE-- 267 (514)
Q Consensus 191 ~~-~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~-- 267 (514)
-+ ..+.+|+.+...|.+...+....|... ..+..++....++ .++++|++.+.+.
T Consensus 187 ~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~---------~~~~~v~~d~~~~-------------~d~~~Le~~i~~~~~ 244 (511)
T 3vp6_A 187 MAAVPKLVLFTSEQSHYSIKKAGAALGFGT---------DNVILIKCNERGK-------------IIPADFEAKILEAKQ 244 (511)
T ss_dssp GGGSCCEEEEEETTSCTHHHHHHHHTTSCG---------GGEEEECBCTTSC-------------BCHHHHHHHHHHHHH
T ss_pred cccCCCeEEEECCCchHHHHHHHHHcCCCC---------CcEEEeecCCCCc-------------cCHHHHHHHHHHHHh
Confidence 11 123455555556665444443333210 0111122211111 1258888888643
Q ss_pred CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCC-CCchhch--hhhhcC
Q 010250 268 GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI-KPDLVSF--AKALSS 344 (514)
Q Consensus 268 ~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv-~pDiv~~--sK~l~g 344 (514)
....+.+|++...++..|.+.| |++|.++|++||+++++|++|.|.......+.....|+ ..|.+++ .|.+++
T Consensus 245 ~g~~~~~vv~~~~~~~~G~vd~----l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~ 320 (511)
T 3vp6_A 245 KGYVPFYVNATAGTTVYGAFDP----IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGV 320 (511)
T ss_dssp TTCEEEEEEEEBSCSSSCCBCC----HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCC
T ss_pred cCCCcEEEEEecCCCCCccccc----HHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCC
Confidence 2233778888888888898876 99999999999999999999985422222121222233 3577754 598887
Q ss_pred CcccceeEEeCH-HHHHHhhhc-cCCCCc-------------ccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHH
Q 010250 345 AYMPIGAILVSP-EVSEVIHSQ-SNTLGS-------------FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAP 409 (514)
Q Consensus 345 G~~pig~v~~~~-~i~~~l~~~-~~~~~~-------------~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~ 409 (514)
+ ...|++++++ +++...... ...... +....+.....+++.+++.++..-.-+++.++..++.+
T Consensus 321 p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~ 399 (511)
T 3vp6_A 321 L-LQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAE 399 (511)
T ss_dssp C-SCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C-cCeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 6 5678888765 444443211 111000 00000001223444444433321112456788888899
Q ss_pred HHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCc-----cchHHHHHHHHHHCCcEEEe---e-C--CEEEE
Q 010250 410 KFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPE-----WGIGAYFGAQCEKHGMLVRV---S-G--DNIMM 478 (514)
Q Consensus 410 ~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~Gv~~~~---~-g--~~iRi 478 (514)
++++.|+++.+..++........++.+.+.+........... ......+.+.|.++|+++.. . + +.+|+
T Consensus 400 ~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi 479 (511)
T 3vp6_A 400 YLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRM 479 (511)
T ss_dssp HHHHHHHSCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEE
Confidence 999999865222221100123444555543321110000000 01134578889999965442 1 2 25999
Q ss_pred eC-CCCCCHHHHHHHHHHHHHHHHH
Q 010250 479 SP-PFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 479 ~p-~~~~t~e~id~~~~~l~~~l~~ 502 (514)
+. ....|++||+.+++.|++.-+.
T Consensus 480 ~~~~~~~t~~di~~ll~~i~~~~~~ 504 (511)
T 3vp6_A 480 VISNPAATQSDIDFLIEEIERLGQD 504 (511)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred EecCCCCCHHHHHHHHHHHHHHHHh
Confidence 98 5778999999999999877654
No 206
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.72 E-value=4e-16 Score=163.30 Aligned_cols=293 Identities=13% Similarity=0.042 Sum_probs=173.9
Q ss_pred hHHHHHHHHHHhcCcCCCCeEEEeCChh-HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCC
Q 010250 145 PSLDLAKELLEMFTASKMAKVFFTNSGS-EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK 223 (514)
Q Consensus 145 ~~~ela~~L~~~~~~~~~~~v~~~~sGs-eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~ 223 (514)
...++.++++++++. +.+ ++|+++|+ .++..++..++.+. +++.||+.+. .|.+...++...|.....
T Consensus 134 ~~~~~~~~la~~~g~-~~~-~~~t~g~te~a~~~al~~~~~~~------~~~~vi~~~~-~h~s~~~~~~~~G~~~~~-- 202 (456)
T 2z67_A 134 LTNKILESFFKQLGL-NVH-AIATPISTGMSISLCLSAARKKY------GSNVVIYPYA-SHKSPIKAVSFVGMNMRL-- 202 (456)
T ss_dssp HHHHHHHHHHHHTTC-CCE-EEEESSCHHHHHHHHHHHHHHHH------CCCEEEEECC-CCHHHHHHHHHTTCEEEE--
T ss_pred HHHHHHHHHHHHcCC-CCC-EEEeCcHHHHHHHHHHHHHHHhc------CCCEEEEECC-CcHHHHHHHHHcCCCceE--
Confidence 345677888888743 223 99999999 46666777654321 2345666666 555433333322321110
Q ss_pred CCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHH-HHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250 224 FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLI-LKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302 (514)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li-~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~ 302 (514)
+...+....++ .++++|++++ ......++.+|++...++..|.+.| +++|.++|+
T Consensus 203 -------v~~~~~~~~~~-------------~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~----l~~I~~la~ 258 (456)
T 2z67_A 203 -------VETVLDGDRVY-------------VPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD----IVEIAKICE 258 (456)
T ss_dssp -------ECCEEETTEEE-------------CCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC----HHHHHHHHH
T ss_pred -------EEEeccCCCCC-------------cCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC----HHHHHHHHH
Confidence 00000011111 1257888888 3211124556655555567788877 999999999
Q ss_pred hcCCEEEEechhcCcccccc-cceecc-cCCCCchhch--hhhhcCCcccceeEEe-CHHHHHHhhhccCCCCcccccCC
Q 010250 303 KYDILFIADEVICAFGRLGT-MFGCDK-YSIKPDLVSF--AKALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFT 377 (514)
Q Consensus 303 ~~gillI~DEv~tG~gr~G~-~~~~~~-~gv~pDiv~~--sK~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t 377 (514)
+||+++|+||++.++. .|. ...... .+ .+|++++ .|.+.++ +++|++++ ++++++.+.+. ..+.
T Consensus 259 ~~g~~v~vD~A~~~~~-~g~~~~~~~~~~~-~~D~~~~s~hK~~~~p-~g~G~l~~~~~~~~~~l~~~-------~~g~- 327 (456)
T 2z67_A 259 NYDIPHIINGAYAIQN-NYYLEKLKKAFKY-RVDAVVSSSDKNLLTP-IGGGLVYSTDAEFIKEISLS-------YPGR- 327 (456)
T ss_dssp HHTCCEEEECTTTTTC-HHHHHHHHHHHTS-CCSEEEEEHHHHHCCC-SSCEEEEESCHHHHHHHHTT-------SCSC-
T ss_pred HcCCcEEEECcchHHH-HHhhHHHHHhhCC-CCCEEEEcCCCCcCCC-CCeEEEEEcCHHHHhhcCcC-------CCCC-
Confidence 9999999999987552 221 111111 12 5787765 6987766 78999999 57888777531 1222
Q ss_pred CCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhcc---CCCceeEEEeeeeeEEEEEccCCCCCCCCCCc
Q 010250 378 YSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFS---DSPIIGEIRGTGLILGTEFADNKSPNEPFPPE 451 (514)
Q Consensus 378 ~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~---~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~ 451 (514)
.++++ ..++.+++..+.. +++.++..++.+++.+.|+++. ...+.. .. .++.+.+....
T Consensus 328 ~~~~~--~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~~---~~-~~v~~~~~~~~--------- 392 (456)
T 2z67_A 328 ASATP--VVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLD---VE-SPIASCISVNS--------- 392 (456)
T ss_dssp BCSHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCC---CC-CSSEEEEECSS---------
T ss_pred CCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCEecC---CC-CeEEEEEeccc---------
Confidence 22233 2233344444332 3467888889999999998773 322221 11 34455552111
Q ss_pred cchHHHHHHHHHHCCc---EEE------------e-eCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 452 WGIGAYFGAQCEKHGM---LVR------------V-SGDNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 452 ~~~~~~~~~~l~~~Gv---~~~------------~-~g~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
....+.+.|.++|+ -+. . ....+|++..+.+|++|||+++++|++++
T Consensus 393 --~~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 393 --DPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp --CHHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred --HHHHHHHHHHHcCCCcceEEeecCccccccccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 02357788889885 232 1 13579999888899999999999998754
No 207
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.71 E-value=1.7e-15 Score=160.45 Aligned_cols=344 Identities=14% Similarity=0.032 Sum_probs=192.4
Q ss_pred CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC-CCC---eEEEeCChhHHHHHHHHHHHHHHhh----
Q 010250 117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS-KMA---KVFFTNSGSEANDTQVKLVWYYNNA---- 188 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~-~~~---~v~~~~sGseA~~~Alk~a~~~~~~---- 188 (514)
.+|.+.+++.+.+.........+....+...++.++++++++.. ..+ ...+++||+||+..++..++..+..
T Consensus 68 ~~~~v~~~l~~~~~~~~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~ 147 (502)
T 3hbx_A 68 MEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKA 147 (502)
T ss_dssp CCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhccCCCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHh
Confidence 58899999998876532221111112333445667788877432 012 3457999999999999877533211
Q ss_pred cCC-CCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc-ccCCCCCCChhHHHHHHHHHHHHHHHH
Q 010250 189 LGR-PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY-WRYAHPGETEEEYSTRLANNLEDLILK 266 (514)
Q Consensus 189 ~~~-~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~le~li~~ 266 (514)
.|. ..+..||+.+.+ |.+...+....|... ..+++... ++ .++++|++.+.
T Consensus 148 ~G~~~~~~~vi~~~~~-h~s~~~~~~~~G~~~------------~~v~~~~~~~~-------------~d~~~l~~~i~- 200 (502)
T 3hbx_A 148 EGKPVDKPNIVTGANV-QVCWEKFARYFEVEL------------KEVKLSEGYYV-------------MDPQQAVDMVD- 200 (502)
T ss_dssp TTCCCSCCEEEEETTC-CHHHHHHHHHTTCEE------------EEECCBTTBCS-------------CCHHHHHHHCC-
T ss_pred cCCCCCCcEEEEcCCc-hHHHHHHHHHcCcee------------EEEecCCCcCc-------------CCHHHHHHHHh-
Confidence 121 123356665555 443332332233211 11111110 11 01466776664
Q ss_pred hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc------CCEEEEechhcCccc--ccccceecccCCCCchhch
Q 010250 267 EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY------DILFIADEVICAFGR--LGTMFGCDKYSIKPDLVSF 338 (514)
Q Consensus 267 ~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~------gillI~DEv~tG~gr--~G~~~~~~~~gv~pDiv~~ 338 (514)
+++.+|++...++..|.+.| +++|.++|++| |+++++|++|.|+.. ..........-...|.+++
T Consensus 201 ---~~t~~v~~~~~~n~tG~~~~----l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~ 273 (502)
T 3hbx_A 201 ---ENTICVAAILGSTLNGEFED----VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINV 273 (502)
T ss_dssp ---TTEEEEEEEBSCTTTCCBCC----HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEE
T ss_pred ---hCCEEEEEecCCCCCCcccC----HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEE
Confidence 34566666666666788877 99999999999 999999999986531 1111111111112465543
Q ss_pred --hhhhcCCcccceeEEeC-HHHH-HHhhhccCCCCcccccCC--CCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHH
Q 010250 339 --AKALSSAYMPIGAILVS-PEVS-EVIHSQSNTLGSFSHGFT--YSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAP 409 (514)
Q Consensus 339 --sK~l~gG~~pig~v~~~-~~i~-~~l~~~~~~~~~~~~~~t--~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~ 409 (514)
.|.+.++ ..+|+++.+ ++.+ +.+.......+......+ ++.+....++..++++.+.. .+..++..++.+
T Consensus 274 s~hK~l~~p-~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~ 352 (502)
T 3hbx_A 274 SGHKYGLVY-AGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMI 352 (502)
T ss_dssp ETTTTTCCC-SSCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccccCCC-CCeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4766555 678887775 4433 222111111111110111 22222233444455554433 345677788888
Q ss_pred HHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------C-CEEEEeCC
Q 010250 410 KFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------G-DNIMMSPP 481 (514)
Q Consensus 410 ~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------g-~~iRi~p~ 481 (514)
+|.+.|+++....++.. .....++.+.+.+.... ....+.+.|.++|+++... + ..+|++..
T Consensus 353 ~l~~~L~~~~~~~~~~~-~~~~~~v~f~~~~~~~~---------~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~ 422 (502)
T 3hbx_A 353 VLREGLEKTERFNIVSK-DEGVPLVAFSLKDSSCH---------TEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIR 422 (502)
T ss_dssp HHHHHHHTTTCEEECSC-SSSSSEEEEEESSCSSC---------CHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECC
T ss_pred HHHHHHHhCCCEEEEeC-CCCceEEEEEecCCCcC---------CHHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeC
Confidence 99998887622111111 01344666766542110 1346888999999986421 1 35999998
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 482 FIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 482 ~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
..+|++|++.+++.|+++++++.+
T Consensus 423 ~~~t~edid~li~~L~~~l~~l~~ 446 (502)
T 3hbx_A 423 EDFSRTLAERLVIDIEKVMRELDE 446 (502)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999987653
No 208
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.71 E-value=2.4e-17 Score=166.56 Aligned_cols=317 Identities=11% Similarity=0.029 Sum_probs=187.2
Q ss_pred CCCHHHHHHHHHHHhcCC----ccccc---cccCCchHHHHHHHHHHhcCcCCCCeEEEeCCh-hHHHHHHHHHHHHHHh
Q 010250 116 GSEPRLVAAATAQLNTLP----FYHSF---WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSG-SEANDTQVKLVWYYNN 187 (514)
Q Consensus 116 h~~p~v~~A~~~~l~~~~----~~~~~---~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sG-seA~~~Alk~a~~~~~ 187 (514)
..+|.|++|+.+.+++.. ..+.. .....+...+++++++++++....+++++++++ ++|++.++....
T Consensus 13 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~~~~~~l~---- 88 (360)
T 1w23_A 13 ALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNLL---- 88 (360)
T ss_dssp CCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHC----
T ss_pred CCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHHHHHHHHhc----
Confidence 368999999999886420 00000 111223466888999998854334589999887 999999887652
Q ss_pred hcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHH-HHHH
Q 010250 188 ALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED-LILK 266 (514)
Q Consensus 188 ~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~-li~~ 266 (514)
.+.++...|......|.....+ ...| ... .++...... ..+.+++++ .+
T Consensus 89 --~~~~~g~~vi~~~~~~~~~~~~-~~~g-~~~------------~v~~~~~~~------------~~d~~~l~~~~i-- 138 (360)
T 1w23_A 89 --TKGTIGNYVLTGSWSEKALKEA-KLLG-ETH------------IAASTKANS------------YQSIPDFSEFQL-- 138 (360)
T ss_dssp --CTTCEEEEEECSHHHHHHHHHH-HTTS-EEE------------EEEECGGGT------------SCSCCCGGGCCC--
T ss_pred --CCCCcccEEEecchhHHHHHHH-HHhC-CeE------------EeecccccC------------cCCccchHhhcc--
Confidence 1112223333322222221111 1111 110 111100000 001234444 33
Q ss_pred hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcC
Q 010250 267 EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSS 344 (514)
Q Consensus 267 ~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~g 344 (514)
.+++++|++..+++.+|.+.+ +|+++||+++|+||+|+.+... ..... . |+++ ++|.++.
T Consensus 139 --~~~~k~v~~~~~~nptG~~~~---------~i~~~~~~~li~D~a~~~~~~~---~~~~~--~--di~~~s~sK~~~~ 200 (360)
T 1w23_A 139 --NENDAYLHITSNNTIYGTQYQ---------NFPEINHAPLIADMSSDILSRP---LKVNQ--F--GMIYAGAQKNLGP 200 (360)
T ss_dssp --CTTEEEEEEESEETTTTEECS---------SCCCCCSSCEEEECTTTTTSSC---CCGGG--C--SEEEEETTTTTSC
T ss_pred --CCCCCEEEEeCCCCCcceecc---------cccccCCceEEEechhhcCCCC---cCccc--C--CEEEEEcccccCC
Confidence 245778888888888898765 2233899999999999843221 11111 1 6664 5698864
Q ss_pred CcccceeEEeCHHHHHHhhhccCCCCccc-------ccCCC-CCcHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHH
Q 010250 345 AYMPIGAILVSPEVSEVIHSQSNTLGSFS-------HGFTY-SGHPVSCAVAIEALKIYKE----RNIVEQVNKIAPKFQ 412 (514)
Q Consensus 345 G~~pig~v~~~~~i~~~l~~~~~~~~~~~-------~~~t~-~~~pl~~aaa~aal~~~~~----~~~~~~~~~~~~~l~ 412 (514)
.++|++++++++++.+.... +... .+.++ +.+..+++++.++++.+.+ +++.++++++.+++.
T Consensus 201 --~G~G~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~ 275 (360)
T 1w23_A 201 --SGVTVVIVKKDLLNTKVEQV---PTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIY 275 (360)
T ss_dssp --TTCEEEEEEHHHHCSCCTTC---CGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred --CCcEEEEEcHHHHhhcccCC---cchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 34899999999877664311 0000 12333 3356666777788887654 246778888888888
Q ss_pred hhhhhccCCCceeEE--E-ee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CEEEEeCCCCCC
Q 010250 413 DGVKAFSDSPIIGEI--R-GT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNIMMSPPFIMS 485 (514)
Q Consensus 413 ~~L~~l~~~~~~~~v--~-g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~iRi~p~~~~t 485 (514)
+.|+++.. +.... . .. +.++.+.+.+. .....+.+.|.++||.+.++. +.||+++....|
T Consensus 276 ~~L~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~~gi~~~~~~~~~~~iRis~~~~~~ 342 (360)
T 1w23_A 276 DTIDESNG--FYVGHAEKGSRSLMNVTFNLRNE-----------ELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAVP 342 (360)
T ss_dssp HHHHTTTT--SSEESSCGGGBCSSEEEEECSSH-----------HHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSC
T ss_pred HHHHHccC--cccccCCchhccCcEEEEEcCCC-----------ccHHHHHHHHHHCCeeeecCCCCCCeEEEEecCCCC
Confidence 88887621 21110 1 12 34677766421 014457788899999987653 569999988889
Q ss_pred HHHHHHHHHHHHHHHHH
Q 010250 486 PEEVDELISKYGKALKA 502 (514)
Q Consensus 486 ~e~id~~~~~l~~~l~~ 502 (514)
++++++++++|++++++
T Consensus 343 ~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 343 IDACIALRELMIQFKEN 359 (360)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999987753
No 209
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.71 E-value=2e-16 Score=162.70 Aligned_cols=334 Identities=11% Similarity=0.073 Sum_probs=193.1
Q ss_pred EEEEccCCcccccCCC--CCHHHHHHHHHHH-hc-CCccccccccCCchHHHHHHHHHHhcCcC-----CCC--eEEEeC
Q 010250 101 KYLDSLAGLWCTALGG--SEPRLVAAATAQL-NT-LPFYHSFWNRTTKPSLDLAKELLEMFTAS-----KMA--KVFFTN 169 (514)
Q Consensus 101 ~ylD~~s~~~~~~lGh--~~p~v~~A~~~~l-~~-~~~~~~~~~~~~~~~~ela~~L~~~~~~~-----~~~--~v~~~~ 169 (514)
..|||..|.....-|. ..+.|.+|.. .+ +. ..+.+. +.....+|.+.+++++... ..+ .++.++
T Consensus 30 ~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~----~~~G~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~ 104 (405)
T 3k7y_A 30 EKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYL----LGNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCI 104 (405)
T ss_dssp SCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCC----TTSSCHHHHHHHHHHHHCSSCTTTTTTCEEEEEEE
T ss_pred CcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCC----CCCCcHHHHHHHHHHHcCCCCccccccceEEEEcC
Confidence 4688876643233342 4677888766 43 22 222111 1222345555555544111 223 368999
Q ss_pred ChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcccCCCCCC
Q 010250 170 SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYWRYAHPGE 247 (514)
Q Consensus 170 sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 247 (514)
+|++|+..++++.... .+ +.|++.+++|.+........+.... .+++ +..|.
T Consensus 105 G~~~al~~~~~~l~~~------~~-d~Vlv~~P~y~~~~~~~~~~g~~~~-------------~v~~~~~~~~~------ 158 (405)
T 3k7y_A 105 GGTGAIFVLLEFLKML------NV-ETLYVTNPPYINHVNMIESRGFNLK-------------YINFFDYNLID------ 158 (405)
T ss_dssp HHHHHHHHHHHHHHTT------TC-CEEEEESSCCHHHHHHHHTTTCEEE-------------EECCEETTTTE------
T ss_pred chHHHHHHHHHHHHhc------CC-CEEEEeCCCCHhHHHHHHHcCCeEE-------------EEeccccccCC------
Confidence 9999999999876511 14 8999999999887544333222111 1111 00011
Q ss_pred ChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc---c
Q 010250 248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT---M 323 (514)
Q Consensus 248 ~~~~~~~~~~~~le~li~~~~~~~~aavivEp-v~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~---~ 323 (514)
.++++|++.+.+. .+..++++.| .+|.+|.+ .+++.+++|.++|++||+++|+||+|.+|...+. .
T Consensus 159 -------~d~~~l~~~l~~~--~~~~~i~l~~~~~NPTG~~-~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~ 228 (405)
T 3k7y_A 159 -------INYDLFLNDLRNI--PNGSSVILQISCYNPCSVN-IEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDV 228 (405)
T ss_dssp -------ECHHHHHHHHHHS--CSSCEEEECCSSCTTTCCC-CCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGG
T ss_pred -------cCHHHHHHHHHhC--CCCeEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccch
Confidence 1147777777642 1234566655 46878865 5678999999999999999999999998854321 1
Q ss_pred ceecc-cCCCCchh---chhhhhc-CCcccceeEEe---CHHHHHHhhhccCCCCcccccCCCC-CcHHHHHHHHHHHHH
Q 010250 324 FGCDK-YSIKPDLV---SFAKALS-SAYMPIGAILV---SPEVSEVIHSQSNTLGSFSHGFTYS-GHPVSCAVAIEALKI 394 (514)
Q Consensus 324 ~~~~~-~gv~pDiv---~~sK~l~-gG~~pig~v~~---~~~i~~~l~~~~~~~~~~~~~~t~~-~~pl~~aaa~aal~~ 394 (514)
..... ....+.++ +|||.++ .| +++|++++ ++++++.+...- .. ....+++ .+.+++.++.++|+.
T Consensus 229 ~~~~~~~~~~~~~i~~~S~SK~~~l~G-lRiG~~~~~~~~~~~~~~~~~~l---~~-~~~~~~~~~~~~~q~~~~~~l~~ 303 (405)
T 3k7y_A 229 LLIRKFEEKNIAFSVCQSFSKNMSLYG-ERAGALHIVCKNQEEKKIVFNNL---CF-IVRKFYSSPVIHTNRILCQLLNN 303 (405)
T ss_dssp HHHHHHHTTTCCEEEEEECTTTSCCTT-TTEEEEEEECSSHHHHHHHHHHH---HH-HHHTTTSSCCHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCCcEEEEeeCCccCCCcc-ccceEEEEEeCCHHHHHHHHHHH---HH-HHhcccCCCcHHHHHHHHHHhCC
Confidence 11111 12223333 6899887 34 99999754 677665543210 00 1112333 345666666666642
Q ss_pred H------hh--ccHHHHHHHHHHHHHhhhh----hccCCCc-eeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHH
Q 010250 395 Y------KE--RNIVEQVNKIAPKFQDGVK----AFSDSPI-IGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGA 460 (514)
Q Consensus 395 ~------~~--~~~~~~~~~~~~~l~~~L~----~l~~~~~-~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 460 (514)
- .+ ..+.++++++++.+.+.|+ ++. .+. ....... |+++++.+.. .++.
T Consensus 304 ~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g-~~~~~~~~~p~gg~f~~~~l~~----------------~~~~ 366 (405)
T 3k7y_A 304 QNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYN-LNYDWNVYKKQRGLFSFVPLLA----------------KIAE 366 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGT-CCCCGGGGSSCCSSEEECGGGG----------------GGTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC-CCCCCccccCCceEEEecCCCH----------------HHHH
Confidence 1 11 2345667888888888888 651 110 1112233 4444443321 1224
Q ss_pred HHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 461 QCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 461 ~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
.|.++||++.|++ ||+.. ..++++|++++++|.++++
T Consensus 367 ~L~~~gV~v~p~~---Ris~a-~~~~~~i~~~~~~i~~~~~ 403 (405)
T 3k7y_A 367 HLKTHHIYIINNG---RINVS-GITKNNVDYIADKICLSLS 403 (405)
T ss_dssp TTTTTTEECCTTS---EEEGG-GCCTTHHHHHHHHHHHHHH
T ss_pred HHHHCCEeecCCC---eEEEe-ccCHHHHHHHHHHHHHHHh
Confidence 4578899999865 88831 3688999999999999875
No 210
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.71 E-value=9.7e-17 Score=165.41 Aligned_cols=350 Identities=11% Similarity=0.063 Sum_probs=189.4
Q ss_pred EEEccCCcccccCCCC--CHHHHHHHHHHHhcC-CccccccccCCchHHHHHHHHHHhcCc----CCCCeEEEeCChhHH
Q 010250 102 YLDSLAGLWCTALGGS--EPRLVAAATAQLNTL-PFYHSFWNRTTKPSLDLAKELLEMFTA----SKMAKVFFTNSGSEA 174 (514)
Q Consensus 102 ylD~~s~~~~~~lGh~--~p~v~~A~~~~l~~~-~~~~~~~~~~~~~~~ela~~L~~~~~~----~~~~~v~~~~sGseA 174 (514)
-+|+.-|.+-..-|.. .|.|.+|....++.. .+.+. +.....+|.+.+++++.+ .+.....-+.+|+.|
T Consensus 46 kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~----p~~G~p~lr~aia~~~~g~~~~~~~~~~~qt~ggtga 121 (420)
T 4h51_A 46 KANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYL----PISGYQPFIDEAVKIIYGNTVELENLVAVQTLSGTGA 121 (420)
T ss_dssp CEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCC----CTTCCHHHHHHHHHHHHC---CGGGEEEEEEEHHHHH
T ss_pred CEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCC----CcCChHHHHHHHHHHhcCCCccccccceeeecCchHH
Confidence 3555544433444532 367888876666542 22111 223335565666554311 122234457899999
Q ss_pred HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250 175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254 (514)
Q Consensus 175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
...++.++... ...+.+.|++.+++|..+.......++.+.....+. . +..+ .
T Consensus 122 ~~~a~~~l~~~----~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~------~----~~~~-------------~ 174 (420)
T 4h51_A 122 VSLGAKLLTRV----FDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYY------D----PKTV-------------S 174 (420)
T ss_dssp HHHHHHHHTTT----SCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECE------E----GGGT-------------E
T ss_pred HHHHHHHHHHh----cCCCCCEEEEecCCchhHHHHHHHcCCeEEEeeccc------c----cccc-------------C
Confidence 98888766321 112356799999999776543333333221100000 0 0000 0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc---cceecc-cC
Q 010250 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT---MFGCDK-YS 330 (514)
Q Consensus 255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~---~~~~~~-~g 330 (514)
.+.+.+.+.+....+ ...+++..+.+|.+|. .++++.+++|.++|+++++++|+||+|.||...+. .+.... .+
T Consensus 175 ~d~~~~~~~l~~~~~-~~~vll~~~p~NPtG~-~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~ 252 (420)
T 4h51_A 175 LNFEGMKKDILAAPD-GSVFILHQCAHNPTGV-DPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFAR 252 (420)
T ss_dssp ECHHHHHHHHHHSCS-SCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHH
T ss_pred CCHHHHHHHHhccCC-CcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHh
Confidence 013445555554443 4455666666666674 45789999999999999999999999999954332 111111 11
Q ss_pred CCCchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCC-cHHHHHHHHHHHHH--H----hh--c
Q 010250 331 IKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSG-HPVSCAVAIEALKI--Y----KE--R 398 (514)
Q Consensus 331 v~pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~-~pl~~aaa~aal~~--~----~~--~ 398 (514)
..+.++ +|||.++-.++++|++++..+..+.......+. ......+++. +..++.++...+.. + ++ +
T Consensus 253 ~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l-~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~ 331 (420)
T 4h51_A 253 RGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVM-DSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELS 331 (420)
T ss_dssp TTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHH-HHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred hCceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHH-HHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 222333 689976653399999887543322221100000 0011233433 33444444444421 1 11 2
Q ss_pred cHHHHHHHHHHHHHhhhhhcc-CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEE
Q 010250 399 NIVEQVNKIAPKFQDGVKAFS-DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM 477 (514)
Q Consensus 399 ~~~~~~~~~~~~l~~~L~~l~-~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iR 477 (514)
.+.++++++++.|.+.|+++. ......-....|+|..+-+. ...++.|.++||++.+.| |
T Consensus 332 ~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gls----------------~e~v~~L~e~~Vy~~~~g---R 392 (420)
T 4h51_A 332 AMAERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGLS----------------KAQCEYCQNHNIFITVSG---R 392 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCCC----------------HHHHHHHHHTTEECCTTC---E
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEecCcC----------------HHHHHHHHhCCEEEcCCC---E
Confidence 456778888888888888761 11110011234554432221 123467889999887765 8
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 478 MSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 478 i~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
|+.. ..+++.|+.++++|.++++++.+
T Consensus 393 is~A-gl~~~ni~~~a~aI~~vvr~i~r 419 (420)
T 4h51_A 393 ANMA-GLTHETALMLAQTINDAVRNVNR 419 (420)
T ss_dssp EEGG-GCCHHHHHHHHHHHHHHHC----
T ss_pred EEec-cCCHHHHHHHHHHHHHHHHHhhc
Confidence 8842 47999999999999999987754
No 211
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.70 E-value=2.9e-16 Score=161.16 Aligned_cols=317 Identities=12% Similarity=0.052 Sum_probs=186.7
Q ss_pred CCHHHHHHHHHHHhcCCc-cccccccCCchHHHHHHHHHHhcCcCCCCeEEE-eCChhHHHHHHHHHHHHHHhhcCCCCc
Q 010250 117 SEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFF-TNSGSEANDTQVKLVWYYNNALGRPNK 194 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~-~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~-~~sGseA~~~Alk~a~~~~~~~~~~~~ 194 (514)
.+|+|++|+.+....... .+. +....+...++.++++++++....++++| ++||++|++.+++.+. .+
T Consensus 51 ~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~--------~~- 120 (398)
T 2fyf_A 51 VRLEQLQTLTTTAAALFGTSHR-QAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLI--------DK- 120 (398)
T ss_dssp CCHHHHHGGGTTTTTTTTSCTT-SHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTC--------SS-
T ss_pred CCHHHHHHHhhcCCCccCcCcC-CHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhc--------CC-
Confidence 578899988763211110 111 11112345788899999885432358998 9999999999998763 11
Q ss_pred cEEEEEecCCcccceeee-ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEE
Q 010250 195 KKFIARQKSYHGSTLIAA-SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIA 273 (514)
Q Consensus 195 ~~ii~~~~~yHG~t~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~a 273 (514)
. ++.....+|+...... ...+ ++ ..+..++.++.+. . + .+ + . ++++
T Consensus 121 g-v~~v~~~~~~~~~~~~~~~~~-------~g---~~~~~v~~~~g~~---~----~-------~~----i---~-~~~~ 167 (398)
T 2fyf_A 121 R-SLHLTYGEFSAKFASAVSKNP-------FV---GEPIIITSDPGSA---P----E-------PQ----T---D-PSVD 167 (398)
T ss_dssp C-EEEEECSHHHHHHHHHHHHCT-------TS---CCCEEEECCTTCC---C----C-------CC----C---C-TTCS
T ss_pred C-eEEEeCCHHHHHHHHHHHHhC-------CC---CceEEEecCCCCC---C----C-------cc----c---c-CCCC
Confidence 2 3333666775421111 1000 00 0011111111000 0 0 00 1 1 3456
Q ss_pred EEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCccccee
Q 010250 274 AFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGA 351 (514)
Q Consensus 274 avivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig~ 351 (514)
+|++...++.+|.+.+ +++|.++ ||+++|+||+|+.+... . +.. .+|+++ ++|.++.++ .+|+
T Consensus 168 ~v~~~~~~nptG~~~~----~~~i~~~---~~~~vivD~a~~~~~~~---~--~~~--~~di~~~s~sK~~~~~g-g~g~ 232 (398)
T 2fyf_A 168 VIAWAHNETSTGVAVA----VRRPEGS---DDALVVIDATSGAGGLP---V--DIA--ETDAYYFAPQKNFASDG-GLWL 232 (398)
T ss_dssp EEEEESEETTTTEECC----CCCCTTC---C-CEEEEECTTTTTTSC---C--CGG--GCSEEEECTTSTTCSCS-SEEE
T ss_pred EEEEeCcCCCcceecc----hHHhhhh---cCCeEEEEeccccCCcc---c--Ccc--cCcEEEEecCcccCCCC-ceEE
Confidence 6777777888898887 4455554 89999999999843221 1 111 267775 559988762 5899
Q ss_pred EEeCHHHHHHhhhcc---CCCCccc----------ccCCC-CCcHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHh
Q 010250 352 ILVSPEVSEVIHSQS---NTLGSFS----------HGFTY-SGHPVSCAVAIEALKIYKER----NIVEQVNKIAPKFQD 413 (514)
Q Consensus 352 v~~~~~i~~~l~~~~---~~~~~~~----------~~~t~-~~~pl~~aaa~aal~~~~~~----~~~~~~~~~~~~l~~ 413 (514)
+++++++++.+.... .....+. .+.++ +.+..+++++.++|+.+.+. ++.++.+++++++.+
T Consensus 233 l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~ 312 (398)
T 2fyf_A 233 AIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYS 312 (398)
T ss_dssp EEECHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHH
T ss_pred EEECHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 999999888764210 0000000 12333 34566677777888876543 357788888889999
Q ss_pred hhhhccCCCcee-EEEeeee-eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCCCH
Q 010250 414 GVKAFSDSPIIG-EIRGTGL-ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSP 486 (514)
Q Consensus 414 ~L~~l~~~~~~~-~v~g~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~t~ 486 (514)
.|+++....+.. ...+.+. ++.+.+.+.. ....+.+.|.++||.++++ ++.||+++...+|+
T Consensus 313 ~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~~~~t~ 381 (398)
T 2fyf_A 313 WAQERPYTTPFVTDPGLRSQVVGTIDFVDDV-----------DAGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEP 381 (398)
T ss_dssp HHHHSTTEEESCCSGGGBCSSEEEEEECTTS-----------CHHHHHHHHHHTTCBCCSCCTTTCSSEEEEECCTTSCH
T ss_pred HHHHcCCceeccCChhhcCCcEEEEECCCCC-----------CHHHHHHHHHHCCcEEecCcccCCCCEEEEEecCCCCH
Confidence 888762211110 0001233 7777774311 1456888999999999753 35799998888899
Q ss_pred HHHHHHHHHHHHHHHH
Q 010250 487 EEVDELISKYGKALKA 502 (514)
Q Consensus 487 e~id~~~~~l~~~l~~ 502 (514)
+|+++++++|++++++
T Consensus 382 e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 382 DDVSALTECVDWVVER 397 (398)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999988754
No 212
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.70 E-value=6e-16 Score=163.06 Aligned_cols=327 Identities=13% Similarity=0.069 Sum_probs=186.0
Q ss_pred CCCHHHHHHHHHHHhcCC-ccc---cccccC---CchHHHHHHHHHHhcCcCCCC---eEEEeCChhHHHHHHHHHHHHH
Q 010250 116 GSEPRLVAAATAQLNTLP-FYH---SFWNRT---TKPSLDLAKELLEMFTASKMA---KVFFTNSGSEANDTQVKLVWYY 185 (514)
Q Consensus 116 h~~p~v~~A~~~~l~~~~-~~~---~~~~~~---~~~~~ela~~L~~~~~~~~~~---~v~~~~sGseA~~~Alk~a~~~ 185 (514)
..+|.|++|+.+.+.+.. ..+ ..+++. ........++++++++. +.+ ..+..+||++|+..++....
T Consensus 55 ~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~-~~~~~~~~V~~~sGs~an~~~~~all-- 131 (483)
T 1rv3_A 55 FASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGL-DPQCWGVNVQPYSGSPANFAVYTALV-- 131 (483)
T ss_dssp CCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTC-CTTTEEEECCCSSHHHHHHHHHHHHT--
T ss_pred CCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCC-CcccCceEEEECCcHHHHHHHHHHhc--
Confidence 358999999998886521 111 122211 11223344788888743 232 22556677789888887653
Q ss_pred HhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC---CcccCCCCCCChhHHHHHHHHHHHH
Q 010250 186 NNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP---HYWRYAHPGETEEEYSTRLANNLED 262 (514)
Q Consensus 186 ~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~le~ 262 (514)
..+++||+.+..|.|................+ ..+..++++ ..+. .++++|++
T Consensus 132 ------~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G-----~~~~~v~~~~~~~~~~-------------iD~d~le~ 187 (483)
T 1rv3_A 132 ------EPHGRIMGLDLPDGGHLTHGFMTDKKKISATS-----IFFESMAYKVNPDTGY-------------IDYDRLEE 187 (483)
T ss_dssp ------CTTCEEEEECGGGTCCGGGCCBCSSCBCSHHH-----HHSEEEEECBCTTTCS-------------BCHHHHHH
T ss_pred ------CCCCEEEEecCccCcCcchhhhhcccCccccc-----ceEEEEECccccCCCc-------------CCHHHHHH
Confidence 34578999988876653111100000000000 000111110 1111 12578888
Q ss_pred HHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhc--hh
Q 010250 263 LILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVS--FA 339 (514)
Q Consensus 263 li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~--~s 339 (514)
++.+. ++.+|++ ...+.+ .+.+ +++|+++|++||++||+||+|. |+-..|.. . ...+ ..|+++ ++
T Consensus 188 ~i~~~---~tklIi~-~~sn~~-~~~d----l~~i~~ia~~~g~~livD~ah~~g~~~~~~~-~-~p~~-~~div~~s~~ 255 (483)
T 1rv3_A 188 NARLF---HPKLIIA-GTSCYS-RNLD----YGRLRKIADENGAYLMADMAHISGLVVAGVV-P-SPFE-HCHVVTTTTH 255 (483)
T ss_dssp HHHHH---CCSEEEE-CCSSCC-SCCC----HHHHHHHHHHTTCEEEEECTTTHHHHHHTSS-C-CGGG-TCSEEEEESS
T ss_pred HHhhc---CCcEEEE-eCCcCC-CcCC----HHHHHHHHHHcCCEEEEEccchhcccccCCC-C-CCCC-CCcEEEecCc
Confidence 88643 3456667 444444 4444 9999999999999999999986 33222211 0 0011 357775 45
Q ss_pred hhhcCCcccceeEEeCHH---------------HHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh---ccHH
Q 010250 340 KALSSAYMPIGAILVSPE---------------VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIV 401 (514)
Q Consensus 340 K~l~gG~~pig~v~~~~~---------------i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~ 401 (514)
|+|+| ++.|+++++++ +.+.+... ...+...+.+....++..++++.+.+ +++.
T Consensus 256 K~l~G--prgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~------~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~ 327 (483)
T 1rv3_A 256 KTLRG--CRAGMIFYRRGVRSVDPKTGKEILYNLESLINSA------VFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQ 327 (483)
T ss_dssp GGGCC--CSCEEEEEECSBCC-------CCBCCHHHHHHHH------HTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred ccCCC--CCceEEEEcchhhhhccccCcchhhHHHHHhhhh------cCCcccCCccHHHHHHHHHHHHHHhChhHHHHH
Confidence 99976 57799998874 33333321 01111112233444444566766543 3567
Q ss_pred HHHHHHHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE----ee----
Q 010250 402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----VS---- 472 (514)
Q Consensus 402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~---- 472 (514)
+++.++.+++.+.|+++ +..++.. +. ..+..+++..... ....+.+.|.+.||.+. |+
T Consensus 328 ~~~~~~~~~l~~~L~~~-g~~~~~~--~~~~~~~~v~~~~~g~----------~~~~~~~~L~~~gI~v~~~~~pg~~~~ 394 (483)
T 1rv3_A 328 RQVVANCRALSAALVEL-GYKIVTG--GSDNHLILVDLRSKGT----------DGGRAEKVLEACSIACNKNTCPGDKSA 394 (483)
T ss_dssp HHHHHHHHHHHHHHHHT-TCEEGGG--SCSSSEEEEEGGGGTC----------CHHHHHHHHHHTTEECEEECCSSCSCT
T ss_pred HHHHHHHHHHHHHHHhc-CCEeccC--CCCCceEEEeccCCCC----------CHHHHHHHHHhCCcEEecCCCCCCCcC
Confidence 78888999999999875 3322221 11 1344555543210 14457778889999988 53
Q ss_pred --CCEEEEeCCCCCC----HHHHHHHHHHHHHHHHH
Q 010250 473 --GDNIMMSPPFIMS----PEEVDELISKYGKALKA 502 (514)
Q Consensus 473 --g~~iRi~p~~~~t----~e~id~~~~~l~~~l~~ 502 (514)
.+.|||+.+...| ++|+++++++|.++++.
T Consensus 395 ~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 395 LRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp TSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 2479999886556 99999999999988865
No 213
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.70 E-value=2.2e-16 Score=163.57 Aligned_cols=234 Identities=15% Similarity=0.134 Sum_probs=147.4
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP 218 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~ 218 (514)
..+...+|+++|+++++ .+.+++++||++|+..+++.+. ..++.||+.++.|++..... +...|..
T Consensus 80 ~~p~~~~le~~lA~l~g---~~~~v~~~sG~~Ai~~al~al~--------~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~ 148 (430)
T 3ri6_A 80 SNPTVEDLEQRLKNLTG---ALGVLALGSGMAAISTAILTLA--------RAGDSVVTTDRLFGHTLSLFQKTLPSFGIE 148 (430)
T ss_dssp CCHHHHHHHHHHHHHHT---CSEEEEESCHHHHHHHHHHHHC--------CTTCEEEEETTCCHHHHHHHHTHHHHTTCE
T ss_pred CCHHHHHHHHHHHHHHC---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEcCCCchhHHHHHHHHHHHcCCE
Confidence 45667889999999873 4568899999999999998763 34578999999998754211 1111211
Q ss_pred cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250 219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 298 (514)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~ 298 (514)
+..++.. +++++++.+. +++++|++|.+++++|.+.+ +++|.
T Consensus 149 ------------~~~v~~~------------------d~~~l~~ai~----~~t~~v~~e~p~NptG~~~d----l~~i~ 190 (430)
T 3ri6_A 149 ------------VRFVDVM------------------DSLAVEHACD----ETTKLLFLETISNPQLQVAD----LEALS 190 (430)
T ss_dssp ------------EEEECTT------------------CHHHHHHHCC----TTEEEEEEESSCTTTCCCCC----HHHHH
T ss_pred ------------EEEeCCC------------------CHHHHHHhhC----CCCeEEEEECCCCCCCeecC----HHHHH
Confidence 1111110 1466766664 46889999999999998887 99999
Q ss_pred HHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEe--CH-HH-----------------
Q 010250 299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILV--SP-EV----------------- 358 (514)
Q Consensus 299 ~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~--~~-~i----------------- 358 (514)
++|++||+++|+||+++ .+. ......+|.+..+.+++|.++|+...+|++++ .+ .+
T Consensus 191 ~la~~~g~~livD~a~~-~~~---~~~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~ 266 (430)
T 3ri6_A 191 KVVHAKGIPLVVDTTMT-PPY---LLEAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMA 266 (430)
T ss_dssp HHHHTTTCCEEEECTTS-CTT---TCCGGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGH
T ss_pred HHHHHcCCEEEEECCCc-ccc---cCChHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhh
Confidence 99999999999999997 222 22222344432333577999985345565554 22 11
Q ss_pred -HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEE---------
Q 010250 359 -SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR--------- 428 (514)
Q Consensus 359 -~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~--------- 428 (514)
++.+.. ..........+|+.+..++..++.+.. ..++..++...+.+.|++. |.+..|.
T Consensus 267 ~i~~~~~------~~~~~~g~~~~~~~a~l~l~~l~~l~~--r~~~~~~na~~la~~L~~~---p~v~~V~~P~l~~~p~ 335 (430)
T 3ri6_A 267 FLYKARK------EVFQNLGPSLSPHNAYLQSLGLETMAL--RIERSCQNAQELAHWLLSI---PQVKCVNHPSLPDSPF 335 (430)
T ss_dssp HHHHHHH------THHHHHCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHTTC---TTCEEEECTTSTTSTT
T ss_pred HHHHHHH------HHHHhcCCCCCHHHHHHHHhhhhhHHH--HHHHHHHHHHHHHHHHhCC---CCccEEECCCCCCCcc
Confidence 122111 001111223467777777777766542 3455666777777777654 4444443
Q ss_pred --------eeee-eEEEEEc
Q 010250 429 --------GTGL-ILGTEFA 439 (514)
Q Consensus 429 --------g~g~-~~~i~~~ 439 (514)
|.|. +++|++.
T Consensus 336 ~~~~~~~~g~Gg~~lsf~l~ 355 (430)
T 3ri6_A 336 YAIAKRQFRYAGSILTFELE 355 (430)
T ss_dssp HHHHHHHCSSCCSEEEEECS
T ss_pred HHHHHHhCCCCceEEEEEEC
Confidence 4466 9999986
No 214
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.69 E-value=1.9e-15 Score=159.22 Aligned_cols=345 Identities=11% Similarity=0.009 Sum_probs=190.7
Q ss_pred CHH-HHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCC---------CeEEEeCChhHHHHHHHHHHHHHHh
Q 010250 118 EPR-LVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKM---------AKVFFTNSGSEANDTQVKLVWYYNN 187 (514)
Q Consensus 118 ~p~-v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~---------~~v~~~~sGseA~~~Alk~a~~~~~ 187 (514)
.|. +.+.+...++.............+...++.++++++++.... ...+|++|||+||..|+.+++....
T Consensus 91 ~~~~~~~~~~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~ 170 (481)
T 4e1o_A 91 WPSLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKI 170 (481)
T ss_dssp HHHHHHHHHHHHHCCCCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHH
Confidence 344 445555566543322111111223344455566666632211 2679999999999999999875422
Q ss_pred hc----CCC------CccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250 188 AL----GRP------NKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257 (514)
Q Consensus 188 ~~----~~~------~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
.. +.. ..+.+|+.+...|.+...+....+... ..+++...++ .++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~------------~~v~~~~~~~-------------~d~ 225 (481)
T 4e1o_A 171 LEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKM------------KFLPVDDNFS-------------LRG 225 (481)
T ss_dssp HHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEE------------EEECCCTTSC-------------CCH
T ss_pred HHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCce------------EEEEcCCCCc-------------CCH
Confidence 10 100 023456666667766544443333221 1122211111 125
Q ss_pred HHHHHHHHHhC--CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCC-CCc
Q 010250 258 NNLEDLILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI-KPD 334 (514)
Q Consensus 258 ~~le~li~~~~--~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv-~pD 334 (514)
++|++.+.+.. ...+.+|++....+..|.+.| |++|.++|++||+++++|++|.|....+..+.....|+ ..|
T Consensus 226 ~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~----l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aD 301 (481)
T 4e1o_A 226 EALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDC----LSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYAD 301 (481)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCS
T ss_pred HHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCC----HHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCC
Confidence 88888886431 122455666666667788876 99999999999999999999986433322222222344 357
Q ss_pred hhch--hhhhcCCcccceeEEeCHH-HHH-HhhhccCCCCc-----------ccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250 335 LVSF--AKALSSAYMPIGAILVSPE-VSE-VIHSQSNTLGS-----------FSHGFTYSGHPVSCAVAIEALKIYKERN 399 (514)
Q Consensus 335 iv~~--sK~l~gG~~pig~v~~~~~-i~~-~l~~~~~~~~~-----------~~~~~t~~~~pl~~aaa~aal~~~~~~~ 399 (514)
.+++ .|.+++. ...|++++++. ... .+......... +....+.....+.+.+++.++..-.-++
T Consensus 302 si~~~~hK~l~~p-~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~ 380 (481)
T 4e1o_A 302 SFTFNPSKWMMVH-FDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQA 380 (481)
T ss_dssp EEEECHHHHSSCC-SSCEEEEESBHHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEChHHhcCCC-CceEEEEEeCHHHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHH
Confidence 7765 5998876 56788877654 322 22110000000 0000111122444444444432211245
Q ss_pred HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcE-EEe---eC-C
Q 010250 400 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGML-VRV---SG-D 474 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~-~~~---~g-~ 474 (514)
+.++..++.+++++.|+++....+... ....++.+.+.... .....+.+.|.++|.+ +.+ .| .
T Consensus 381 ~~~~~~~~a~~l~~~L~~~~g~~~~~~--~~~~~v~f~~~~~~----------~~~~~l~~~L~~~g~~~~~~~~~~g~~ 448 (481)
T 4e1o_A 381 HVRHGTEMAKYFESLVRNDPSFEIPAK--RHLGLVVFRLKGPN----------SLTENVLKEIAKAGRLFLIPATIQDKL 448 (481)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTEECCSC--CCSSEEEEEESSCH----------HHHHHHHHHHHHHCSSBCEEEEETTEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEecC--CceeEEEEEeCCch----------HHHHHHHHHHHhCCeEEEEeeEECCEE
Confidence 677888899999999987633222211 12345556553211 1345688888888844 333 23 3
Q ss_pred EEEEeCCC-CCCHHHHHHHHHHHHHHHHHHH
Q 010250 475 NIMMSPPF-IMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 475 ~iRi~p~~-~~t~e~id~~~~~l~~~l~~~~ 504 (514)
.+|++... ..|++||++++++|+++++++.
T Consensus 449 ~lR~~~~~~~tt~~di~~~~~~i~~~~~~l~ 479 (481)
T 4e1o_A 449 IIRFTVTSQFTTRDDILRDWNLIRDAATLIL 479 (481)
T ss_dssp EEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 59999653 4589999999999999887653
No 215
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.69 E-value=1.9e-16 Score=164.05 Aligned_cols=297 Identities=13% Similarity=-0.011 Sum_probs=172.1
Q ss_pred CCHHHHHHHHHHHhcCCc--cccccccCCchHHHHHHHHHHhcCcCCCCeEEE---eCChhHHHHHHHHHHHHHHhhcCC
Q 010250 117 SEPRLVAAATAQLNTLPF--YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFF---TNSGSEANDTQVKLVWYYNNALGR 191 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~--~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~---~~sGseA~~~Alk~a~~~~~~~~~ 191 (514)
++++|++|+.++...... ....+..+.....+++++++++++ .+...+ ++||++|++.+++...
T Consensus 36 n~~~vl~A~~~~~~~~~~~~~~~g~~y~~~~~~~l~~~la~~~g---~~~~~~~i~~~sGt~Ai~~al~al~-------- 104 (431)
T 3ht4_A 36 NQFRVLESFGKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFG---AEAGLVRPQIISGTHAISTALFGIL-------- 104 (431)
T ss_dssp HHHHHHHHHHHTTCCGGGSCCCCTTCCSCHHHHHHHHHHHHHTT---CSEECCBTTSCSHHHHHHHHHHTTC--------
T ss_pred HHHHHHHHHHHhchhhhhcCCCCCCCCChhhHHHHHHHHHHHhC---CCcccccceeeCHHHHHHHHHHHhC--------
Confidence 567888888775321111 111222334556789999999874 334443 5699999999997542
Q ss_pred CCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCc
Q 010250 192 PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPET 271 (514)
Q Consensus 192 ~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~ 271 (514)
..+++||+.++..|+.+...+.+++. ++..+......+..++....+. .++++|++.+. ++
T Consensus 105 ~~Gd~Vl~~~~~~y~~~~~~~~l~g~--~~~~~~~~G~~~~~v~~~~~~~-------------~d~e~l~~~l~----~~ 165 (431)
T 3ht4_A 105 RPGDELLYITGKPYDTLEEIVGVRGK--GVGSFKEYNIGYNAVPLTEGGL-------------VDFEAVAAAIH----SN 165 (431)
T ss_dssp CTTCEEEECSSSCCTTHHHHTTSSSC--SSSCSGGGTCEEEECCBCTTSS-------------BCHHHHHHHCC----TT
T ss_pred CCCCEEEEeCCCCchhHHHHHhhccc--ccchHHHcCCEEEEeCCCCCCC-------------cCHHHHHhhcC----CC
Confidence 33467888874555555444443332 1111110001111222211111 12567777664 46
Q ss_pred EEEEEEcc-ccCCCCcccCChhHHHHHHHHHHh--cCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCc
Q 010250 272 IAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKK--YDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAY 346 (514)
Q Consensus 272 ~aavivEp-v~~~~G~~~p~~~~L~~l~~l~~~--~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~ 346 (514)
+++|++++ .++.+|. ..+...+++|.++|++ ||+++|+||+|+++...+... .++ .|++ +++|.++||+
T Consensus 166 tk~V~i~~sp~np~~~-~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~---~~g--~Di~~~S~sK~lgg~~ 239 (431)
T 3ht4_A 166 TKMIGIQRSKGYATRP-SFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPC---HVG--ADLMAGSLIKNPGGGI 239 (431)
T ss_dssp EEEEEEECSCTTSSSC-CCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGG---GTT--CSEEEEETTSGGGTTT
T ss_pred CeEEEEECCCCCCCCC-cCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCcc---ccC--CeEEEcCccccCCCCC
Confidence 88999996 3334333 3355669999999999 999999999998764433322 123 4655 6889999853
Q ss_pred -ccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-C-CCc
Q 010250 347 -MPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-D-SPI 423 (514)
Q Consensus 347 -~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-~-~~~ 423 (514)
.+.|++++++++++.+...... ...+.+.+.++..+.+++..++.+ +...++..+++.++.+.|+++. . .|.
T Consensus 240 ~~~GG~v~~~~~li~~l~~~~~~---~~~g~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~a~~l~~~L~~~g~~v~p~ 314 (431)
T 3ht4_A 240 VKTGGYIVGKEQYVEACAYRLTS---PGIGAEAGASLYSLQEMYQGFFLA--PHVAGQALKGAIFTAAFLEKLGMNTSPA 314 (431)
T ss_dssp CSSCEEEEECHHHHHHHHHHHSC---TTTTTSCSCCCSCSHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTCCEESC
T ss_pred CCceEEEEecHHHHHHHHHHhcc---CCcccccCccHHHHHHHHhHhhhH--HHHHHHHHHHHHHHHHHHHhCcCEecCC
Confidence 4567888999998888642111 112223333222233344555544 3456778888888988888762 1 111
Q ss_pred eeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250 424 IGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 466 (514)
Q Consensus 424 ~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 466 (514)
...++.++++.+.+.+.. ....+++.|++..
T Consensus 315 -~~~~~~~li~~i~l~~~~-----------~~~~~~~~l~~~~ 345 (431)
T 3ht4_A 315 -WNAPRTDLIQSVQFDDKD-----------RMIAFCQAIQYAS 345 (431)
T ss_dssp -TTSCCSSSCCEEECCCHH-----------HHHHHHHHHHHTS
T ss_pred -CCCCCccEEEEEEeCCHH-----------HHHHHHHHHHhcC
Confidence 123445667888875321 3556788888764
No 216
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.68 E-value=1.1e-15 Score=160.30 Aligned_cols=321 Identities=14% Similarity=0.098 Sum_probs=175.4
Q ss_pred CCHHHHHHHHHHHhc-CCcc---ccccccC--CchHH-HHHHHHHHhcCcCCCC---eEEEeCChhHHHHHHHHHHHHHH
Q 010250 117 SEPRLVAAATAQLNT-LPFY---HSFWNRT--TKPSL-DLAKELLEMFTASKMA---KVFFTNSGSEANDTQVKLVWYYN 186 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~-~~~~---~~~~~~~--~~~~~-ela~~L~~~~~~~~~~---~v~~~~sGseA~~~Alk~a~~~~ 186 (514)
.+|+|++|+...+.+ ...+ ..++++. .+..+ ...++++++++. ..+ ..++++||++||..++....
T Consensus 66 ~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~-~~~~~~~~v~~~sGt~An~~al~al~--- 141 (490)
T 2a7v_A 66 CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDL-DPAQWGVNVQPYSGSPANLAVYTALL--- 141 (490)
T ss_dssp CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTC-CTTTEEEECCCSSHHHHHHHHHHHHC---
T ss_pred CCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCC-CcccCceEEeCCchHHHHHHHHHHHc---
Confidence 489999999988743 3222 1222322 11222 223788888843 222 24567799999999998663
Q ss_pred hhcCCCCccEEEEEecCCcccce-e------eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250 187 NALGRPNKKKFIARQKSYHGSTL-I------AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259 (514)
Q Consensus 187 ~~~~~~~~~~ii~~~~~yHG~t~-~------~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (514)
..+++||+.+..|.|... + .+..++.. +. .++++. + . +....++++
T Consensus 142 -----~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~-----~~-------~~~~~v----d--~----~~~~iD~d~ 194 (490)
T 2a7v_A 142 -----QPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIF-----FE-------SMPYKL----N--P----KTGLIDYNQ 194 (490)
T ss_dssp -----CSCEECCC-------------------------------------------CCB----C--T----TTCSBCHHH
T ss_pred -----CCCCEecccCccccccccchhhhcchhHHHcCCe-----EE-------EEeccc----c--c----ccCCcCHHH
Confidence 335678887776644311 1 11222210 00 000000 0 0 001123688
Q ss_pred HHHHHHHhCCCcEEEEEE-ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhc
Q 010250 260 LEDLILKEGPETIAAFIA-EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVS 337 (514)
Q Consensus 260 le~li~~~~~~~~aaviv-Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~ 337 (514)
|++++....+ .+|++ .|.++ ...+ +++|+++|++||++|++|++|. |+...|.. . ..+. ..|+++
T Consensus 195 le~~l~~~~~---klIi~~~s~~~---~~~d----l~~i~~ia~~~g~~livD~Ah~~glv~~g~~-~-~~~~-~aDiv~ 261 (490)
T 2a7v_A 195 LALTARLFRP---RLIIAGTSAYA---RLID----YARMREVCDEVKAHLLADMAHISGLVAAKVI-P-SPFK-HADIVT 261 (490)
T ss_dssp HHHHHHHHCC---SEEEECCSSCC---SCCC----HHHHHHHHHHTTCEEEEECGGGHHHHHTTSS-C-CGGG-TCSEEE
T ss_pred HHHHHhhcCC---cEEEEcCCCCC---Cccc----HHHHHHHHHHcCCEEEEccccccccccCCcC-C-CCCC-CCCEEE
Confidence 8888865432 34555 34443 2333 9999999999999999999986 33222211 1 1111 247764
Q ss_pred --hhhhhcCCcccceeEEeCHH---------------HHHHhhhccCCCCcccccCCCCC-cHHHHHHHHHHHHHHhh--
Q 010250 338 --FAKALSSAYMPIGAILVSPE---------------VSEVIHSQSNTLGSFSHGFTYSG-HPVSCAVAIEALKIYKE-- 397 (514)
Q Consensus 338 --~sK~l~gG~~pig~v~~~~~---------------i~~~l~~~~~~~~~~~~~~t~~~-~pl~~aaa~aal~~~~~-- 397 (514)
++|+|+| .+.|+++++++ +.+.+... ...++.++ ++...++..++++.+.+
T Consensus 262 ~S~hK~l~G--p~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~-------~~~g~qggp~~~~iaAla~Al~~~~~~~ 332 (490)
T 2a7v_A 262 TTTHKTLRG--ARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFA-------VFPSLQGGPHNHAIAAVAVALKQACTPM 332 (490)
T ss_dssp EESSGGGCS--CSCEEEEEECSEEEEETTTEEEEECCCHHHHHHH-------HTTTTCCSCCHHHHHHHHHHHHHHHSHH
T ss_pred ECCcccCcc--ccchheeeccchhcccccccchhhHHHHHHHHHH-------hcccCCCCchHHHHHHHHHHHHHHhhhh
Confidence 6799976 46688888764 34444421 11122222 34444444456665532
Q ss_pred -ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----
Q 010250 398 -RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---- 472 (514)
Q Consensus 398 -~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---- 472 (514)
++..+++.++.++|++.|++. ...++.. .....++.+++.+... .+..+.+.|.+.||.+...
T Consensus 333 ~~~~~~~~~~na~~L~~~L~~~-G~~v~~~-~t~t~lv~vdl~~~g~----------~~~~~~~~L~~~GI~v~~~~~p~ 400 (490)
T 2a7v_A 333 FREYSLQVLKNARAMADALLER-GYSLVSG-GTDNHLVLVDLRPKGL----------DGARAERVLELVSITANKNTCPG 400 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCEEGGG-SCSSSEEEEECTTTTC----------CHHHHHHHHHHTTEECEEECCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-CcEEecC-CCCCeEEEEEeCCCCC----------CHHHHHHHHHhCCeEEecCccCC
Confidence 356788889999999999875 3222210 0112455666643211 1455778888999998732
Q ss_pred ------CCEEEEeCCC----CCCHHHHHHHHHHHHHHHHH
Q 010250 473 ------GDNIMMSPPF----IMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 473 ------g~~iRi~p~~----~~t~e~id~~~~~l~~~l~~ 502 (514)
...||+..|. .++++|++++++.|.+++..
T Consensus 401 d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~ 440 (490)
T 2a7v_A 401 DRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNI 440 (490)
T ss_dssp CCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHHh
Confidence 2569996543 57899999999999988863
No 217
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.67 E-value=1e-15 Score=157.96 Aligned_cols=285 Identities=13% Similarity=0.127 Sum_probs=171.7
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP 218 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~ 218 (514)
..+...+++++|+++++ .+.+++++||++|+..+++... ..+++||+.++.|++..... +...|..
T Consensus 80 ~~p~~~~le~~lA~l~g---~~~~i~~ssGt~Ai~~al~~l~--------~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~ 148 (415)
T 2fq6_A 80 GTLTHFSLQQAMCELEG---GAGCVLFPCGAAAVANSILAFI--------EQGDHVLMTNTAYEPSQDFCSKILSKLGVT 148 (415)
T ss_dssp CCHHHHHHHHHHHHHHT---CSEEEEESSHHHHHHHHHHTTC--------CTTCEEEEETTSCHHHHHHHHHTGGGGTCE
T ss_pred CCchHHHHHHHHHHHhC---CCeEEEeCCHHHHHHHHHHHHh--------CCCCEEEEeCCCchHHHHHHHHHHHHcCcE
Confidence 44667889999999874 3567888999999999987542 23468999998888753111 1111111
Q ss_pred cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250 219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 298 (514)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~ 298 (514)
+..++.. +++++++++. +++++|++|.++++.|.+.+ +++|.
T Consensus 149 ------------v~~v~~~------------------d~~~le~ai~----~~tklV~~e~~~NptG~v~d----l~~I~ 190 (415)
T 2fq6_A 149 ------------TSWFDPL------------------IGADIVKHLQ----PNTKIVFLESPGSITMEVHD----VPAIV 190 (415)
T ss_dssp ------------EEEECTT------------------CGGGGGGGCC----TTEEEEEEESSCTTTCCCCC----HHHHH
T ss_pred ------------EEEECCC------------------CHHHHHHhhc----cCCcEEEEECCCCCCCEeec----HHHHH
Confidence 0111110 1355665553 35789999999999999987 99999
Q ss_pred HHHHh--cCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcc-cceeEEeCHHHHHHhhhccCCCCccc
Q 010250 299 AVVKK--YDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYM-PIGAILVSPEVSEVIHSQSNTLGSFS 373 (514)
Q Consensus 299 ~l~~~--~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~-pig~v~~~~~i~~~l~~~~~~~~~~~ 373 (514)
++|++ ||+++|+|++|+. +..+... ....|++ +++|.+++++. .+|++++++++++.+.... ..
T Consensus 191 ~la~~~~~g~~livD~a~a~-~~~~~p~-----~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~-----~~ 259 (415)
T 2fq6_A 191 AAVRSVVPDAIIMIDNTWAA-GVLFKAL-----DFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENA-----YL 259 (415)
T ss_dssp HHHHHHCTTCEEEEECTTTT-TTSSCGG-----GGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHH-----HH
T ss_pred HHHHhhcCCCEEEEECCCcc-cccCCcc-----ccCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHH-----Hh
Confidence 99999 9999999999972 2222111 2346877 56799988533 3688888888877776321 11
Q ss_pred ccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEE
Q 010250 374 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEF 438 (514)
Q Consensus 374 ~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~ 438 (514)
.| ...+|..+..++.+++.+.. ..++..++...+.+.|++.. .+|... ..++.|.++.|.+
T Consensus 260 ~G--~~~~~~~a~~~~~~l~~l~~--r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l 335 (415)
T 2fq6_A 260 MG--QMVDADTAYITSRGLRTLGV--RLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVL 335 (415)
T ss_dssp TT--CCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEE
T ss_pred cC--CCCCHHHHHHHHhhhhHHHH--HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEE
Confidence 12 23457766666666665532 23444455555555554431 012110 0124678889988
Q ss_pred ccCCCCCCCCCCccchHHHHHHHHHHCCc----------EEE----------------eeCCEEEEeCCCCCCHHHHHHH
Q 010250 439 ADNKSPNEPFPPEWGIGAYFGAQCEKHGM----------LVR----------------VSGDNIMMSPPFIMSPEEVDEL 492 (514)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv----------~~~----------------~~g~~iRi~p~~~~t~e~id~~ 492 (514)
...... .....+...+.-.++ ... ..++.|||+..+..++++|+.+
T Consensus 336 ~g~~~~--------~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l 407 (415)
T 2fq6_A 336 KKKLNN--------EELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADL 407 (415)
T ss_dssp SSCCCH--------HHHHHHHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHH
T ss_pred CCCCCH--------HHHHHHHHhCCcCeEeccCCCCceeEEecCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHH
Confidence 642000 001112222111110 000 0135799999998898888888
Q ss_pred HHHHHH
Q 010250 493 ISKYGK 498 (514)
Q Consensus 493 ~~~l~~ 498 (514)
.++|++
T Consensus 408 ~~al~~ 413 (415)
T 2fq6_A 408 DAGFAR 413 (415)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 887764
No 218
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.67 E-value=2.4e-16 Score=159.52 Aligned_cols=328 Identities=12% Similarity=0.065 Sum_probs=192.1
Q ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc-------cccccccCCchHHHHHHHHHHhcCcCCCC-eE-EEeC
Q 010250 99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-------YHSFWNRTTKPSLDLAKELLEMFTASKMA-KV-FFTN 169 (514)
Q Consensus 99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~-------~~~~~~~~~~~~~ela~~L~~~~~~~~~~-~v-~~~~ 169 (514)
++.|+|..+. ...+|+|++|+.+.+.+... ....+....+...+++++++++++. ..+ ++ ++++
T Consensus 3 ~~~~l~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~-~~~~~~i~~t~ 75 (362)
T 2c0r_A 3 ERAYNFNAGP------AALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGN-PTGYKVLFIQG 75 (362)
T ss_dssp CCCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTC-CSSEEEEEESS
T ss_pred cceeeccCCC------CCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCC-CCCcEEEEECC
Confidence 4567765432 23689999999998754210 0000111223456788888888743 232 54 6779
Q ss_pred ChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccce-eeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCC
Q 010250 170 SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTL-IAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPG 246 (514)
Q Consensus 170 sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 246 (514)
||++|+..+++... ..+++||+.+..+++... ......|.... ++.+ ..+... +
T Consensus 76 g~t~a~~~~~~~l~--------~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~-------------v~~~~~~~~~~~-~- 132 (362)
T 2c0r_A 76 GASTQFAMIPMNFL--------KEGQTANYVMTGSWASKALKEAKLIGDTHV-------------AASSEASNYMTL-P- 132 (362)
T ss_dssp HHHHHHHHHHHHHC--------CTTCEEEEEECSHHHHHHHHHHHHHSCEEE-------------EEECGGGTTCSC-C-
T ss_pred CchHHHHHHHHhcC--------CCCCeEEEEecCcHhHHHHHHHHHhCCeEE-------------EecccccccccC-C-
Confidence 99999999998663 234678877766555321 11111121110 0100 000000 0
Q ss_pred CChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccccee
Q 010250 247 ETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC 326 (514)
Q Consensus 247 ~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~ 326 (514)
+ .++++ + . +++.+|++.+.++.+|.+.++ +++| ||+++|+||+|. +|.. ..
T Consensus 133 -~--------~~~~~--i---~-~~t~~v~~~~~~n~tG~~~~~---l~~i------~~~~vivD~a~~-~~~~--~~-- 183 (362)
T 2c0r_A 133 -K--------LQEIQ--L---Q-DNAAYLHLTSNETIEGAQFKA---FPDT------GSVPLIGDMSSD-ILSR--PF-- 183 (362)
T ss_dssp -C--------GGGCC--C---C-TTEEEEEEESEETTTTEECSS---CCCC------TTSCEEEECTTT-TTSS--CC--
T ss_pred -C--------HHHcc--c---C-CCcCEEEEeCCcCccceeccc---cccc------CCCEEEEEChhh-ccCC--cc--
Confidence 0 11111 1 2 356777777667888885332 5555 899999999997 4322 11
Q ss_pred cccCCCCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcc------cc-cCCCCCcHHHHHHHHHHHHHHhh
Q 010250 327 DKYSIKPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF------SH-GFTYSGHPVSCAVAIEALKIYKE 397 (514)
Q Consensus 327 ~~~gv~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~------~~-~~t~~~~pl~~aaa~aal~~~~~ 397 (514)
+.... |++ +++|.++. ..+|++++++++++.+..... ..+ .. ...++.++.+++++.++|+.+.+
T Consensus 184 ~~~~~--d~~~~s~~K~~g~--~G~G~l~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~ 257 (362)
T 2c0r_A 184 DLNQF--GLVYAGAQKNLGP--SGVTVVIVREDLVAESPKHLP--TMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEE 257 (362)
T ss_dssp CGGGC--SEEEEETTTTTCC--SSCEEEEEEGGGSSSCCTTSC--GGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHH
T ss_pred chhHC--cEEEEeccccccC--cCcEEEEEcHHHHhhccccCc--hHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHH
Confidence 11112 665 56799863 338999999988766642100 000 01 12345667788888889987654
Q ss_pred ----ccHHHHHHHHHHHHHhhhhhccCC-CceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe
Q 010250 398 ----RNIVEQVNKIAPKFQDGVKAFSDS-PIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV 471 (514)
Q Consensus 398 ----~~~~~~~~~~~~~l~~~L~~l~~~-~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~ 471 (514)
+...++.+++++++.+.|+++... ...... ...+.++.+.+.+. .....+.+.|.++||.+.+
T Consensus 258 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~L~~~gi~~~~ 326 (362)
T 2c0r_A 258 RGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLASE-----------ELEKEFVKASEQEGFVGLK 326 (362)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSCH-----------HHHHHHHHHHHHTTEESCB
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCCc-----------chHHHHHHHHHHCCCeecc
Confidence 346778888888999988876211 111100 11233445554321 0245688889999998765
Q ss_pred e---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 472 S---GDNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 472 ~---g~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
+ .+.||++....+|+||++++++.|++.+++
T Consensus 327 g~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~~~ 360 (362)
T 2c0r_A 327 GHRSVGGLRASIYNAVPYESCEALVQFMEHFKRS 360 (362)
T ss_dssp CCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 3 246999987778999999999999988754
No 219
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.66 E-value=1.3e-14 Score=152.95 Aligned_cols=344 Identities=10% Similarity=-0.002 Sum_probs=182.3
Q ss_pred HHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC--------CCeEEEeCChhHHHHHHHHHHHHHHhhc-CC
Q 010250 121 LVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK--------MAKVFFTNSGSEANDTQVKLVWYYNNAL-GR 191 (514)
Q Consensus 121 v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~--------~~~v~~~~sGseA~~~Alk~a~~~~~~~-~~ 191 (514)
+.+++...++.....+...........+++++++++++... ...++|++|||||+..|+..++...... +.
T Consensus 90 ~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~ 169 (486)
T 1js3_A 90 LADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQA 169 (486)
T ss_dssp HHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhc
Confidence 55666666654322211111122333345566677764321 2468999999999999998886431110 00
Q ss_pred C-C--------ccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHH
Q 010250 192 P-N--------KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 262 (514)
Q Consensus 192 ~-~--------~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~ 262 (514)
. + .+.+|+.....|.+...+....|... ..+++...++ .++++|++
T Consensus 170 ~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v------------~~v~~d~~~~-------------~d~~~L~~ 224 (486)
T 1js3_A 170 ASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKL------------KAIPSDGKFA-------------MRASALQE 224 (486)
T ss_dssp HSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEE------------EEECCCTTSC-------------CCHHHHHH
T ss_pred cCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCce------------EEeecCCCCC-------------CCHHHHHH
Confidence 0 1 12234444444444333322222211 1122211111 11578888
Q ss_pred HHHHhC--CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCC-CCchhc--
Q 010250 263 LILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI-KPDLVS-- 337 (514)
Q Consensus 263 li~~~~--~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv-~pDiv~-- 337 (514)
.+.+.. ...+.+|++....+..|.+.| +++|.++|++||+++++|++|.++-.....+.....++ ..|.++
T Consensus 225 ~i~~~~~~g~~p~~vv~~~~~n~tG~~~~----l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~ 300 (486)
T 1js3_A 225 ALERDKAAGLIPFFVVATLGTTSCCSFDN----LLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFN 300 (486)
T ss_dssp HHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEEC
T ss_pred HHHHHHhCCCCceEEEEeCCCCCCCCCCC----HHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEc
Confidence 886432 112335555545566787766 99999999999999999999986432221111111232 357665
Q ss_pred hhhhhcCCcccceeEEeCHH-H-HHHhhhccCCCCc----------ccc---cCCCCCcHHHHHHHHHHHHHHhhccHHH
Q 010250 338 FAKALSSAYMPIGAILVSPE-V-SEVIHSQSNTLGS----------FSH---GFTYSGHPVSCAVAIEALKIYKERNIVE 402 (514)
Q Consensus 338 ~sK~l~gG~~pig~v~~~~~-i-~~~l~~~~~~~~~----------~~~---~~t~~~~pl~~aaa~aal~~~~~~~~~~ 402 (514)
.+|.++.+ +.+|+++++++ . .+.+......... +.. ..+.....+++.+++..+..-.-+++.+
T Consensus 301 ~hK~~~~p-~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~ 379 (486)
T 1js3_A 301 PHKWLLVN-FDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIR 379 (486)
T ss_dssp HHHHSSCC-SSCEEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcCCC-cceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHH
Confidence 46988776 68899998654 2 4444211000000 000 0011122344444444332111134567
Q ss_pred HHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----C-CEEE
Q 010250 403 QVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----G-DNIM 477 (514)
Q Consensus 403 ~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----g-~~iR 477 (514)
+..++.+++.+.|+++....++. ...+.++.+.+.... .....+.+.|.++|+++... + ..+|
T Consensus 380 ~~~~~a~~l~~~L~~~~~~~~~~--~~~~~~v~f~~~~~~----------~~~~~l~~~L~~~g~~~~~~~~~~~~~~lR 447 (486)
T 1js3_A 380 KHVQLSHEFEAFVLQDPRFEVCA--EVTLGLVCFRLKGSD----------GLNEALLERINSARKIHLVPCRLRGQFVLR 447 (486)
T ss_dssp HHHHHHHHHHHHHHHCTTEEECS--CCCSSEEEEEESSCH----------HHHHHHHHHHHHHTSCBCEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCeEEeC--CCceeEEEEEecChH----------HHHHHHHHHHHhcCCEEEEEEEECCEEEEE
Confidence 77888888998888752221111 123445555553210 12456788888888654321 2 3699
Q ss_pred EeC-CCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250 478 MSP-PFIMSPEEVDELISKYGKALKATEER 506 (514)
Q Consensus 478 i~p-~~~~t~e~id~~~~~l~~~l~~~~~~ 506 (514)
++. ....|++||++++++|+++++++.++
T Consensus 448 i~~~~~~~t~~di~~~~~~l~~~~~~~~~~ 477 (486)
T 1js3_A 448 FAICSRKVESGHVRLAWEHIRGLAAELLAA 477 (486)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 995 34478999999999999998776543
No 220
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.66 E-value=4.5e-15 Score=155.99 Aligned_cols=317 Identities=12% Similarity=0.012 Sum_probs=177.0
Q ss_pred hHHHHHHHHHHhcCcCC--------CCeEEEeCChhHHHHHHHHHHHHHHhhc---CCCC-------ccEEEEEecCCcc
Q 010250 145 PSLDLAKELLEMFTASK--------MAKVFFTNSGSEANDTQVKLVWYYNNAL---GRPN-------KKKFIARQKSYHG 206 (514)
Q Consensus 145 ~~~ela~~L~~~~~~~~--------~~~v~~~~sGseA~~~Alk~a~~~~~~~---~~~~-------~~~ii~~~~~yHG 206 (514)
...++.++++++++... ....+|++|||+||..|+..++...... ..++ .+.+|+.+...|-
T Consensus 114 lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~ 193 (475)
T 3k40_A 114 LEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHS 193 (475)
T ss_dssp HHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCH
T ss_pred HHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchH
Confidence 33445556667663221 1268999999999999999997543211 0011 1345666666776
Q ss_pred cceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC--CCcEEEEEEccccCCC
Q 010250 207 STLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG--PETIAAFIAEPVIGAG 284 (514)
Q Consensus 207 ~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~--~~~~aavivEpv~~~~ 284 (514)
+...+....|... ..+++... . .++++|++.|.+.. ...+.+|++.-..+..
T Consensus 194 s~~~~~~~~g~~~------------~~v~~d~~-------------~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~ 247 (475)
T 3k40_A 194 SVERAGLLGGVKL------------RSVQSENH-------------R-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNS 247 (475)
T ss_dssp HHHHHHHHHTCEE------------EEECCBTT-------------B-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTT
T ss_pred HHHHHHHHcCCce------------EEEECCCC-------------C-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCC
Confidence 6544444333221 11221110 1 22688888886531 1224555555556667
Q ss_pred CcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCC-CCchhch--hhhhcCCcccceeEEeCHH-H-H
Q 010250 285 GVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI-KPDLVSF--AKALSSAYMPIGAILVSPE-V-S 359 (514)
Q Consensus 285 G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv-~pDiv~~--sK~l~gG~~pig~v~~~~~-i-~ 359 (514)
|.+.| +++|.++|++||+++++|++|.+....+..+.....++ ..|.+++ .|.+++. ..+|++++++. . .
T Consensus 248 G~~~~----l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p-~g~g~l~~~~~~~l~ 322 (475)
T 3k40_A 248 CAFDY----LDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVN-FDCSAMWLKDPSWVV 322 (475)
T ss_dssp CCBCC----HHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESSGGGC-
T ss_pred cCcCC----HHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCC-CceEEEEEeCHHHHH
Confidence 88876 99999999999999999999975322222111112243 3577765 5988876 57788887653 3 2
Q ss_pred HHhhhccCCCCccccc-------CCC-CCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEEE
Q 010250 360 EVIHSQSNTLGSFSHG-------FTY-SGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR 428 (514)
Q Consensus 360 ~~l~~~~~~~~~~~~~-------~t~-~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~ 428 (514)
+.+.....+......+ .+. .+-+.......++|+.+.. +++.++..++.+++++.|+++....++..
T Consensus 323 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~-- 400 (475)
T 3k40_A 323 NAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAE-- 400 (475)
T ss_dssp --------------------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSC--
T ss_pred HHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC--
Confidence 2222111000000000 011 1112222333344444433 45677888899999999987633222211
Q ss_pred eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE-e---eC-CEEEEeCC-CCCCHHHHHHHHHHHHHHHHH
Q 010250 429 GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR-V---SG-DNIMMSPP-FIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 429 g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~-~---~g-~~iRi~p~-~~~t~e~id~~~~~l~~~l~~ 502 (514)
....++.+.+.... .....+.+.|.++|.+.. + .| ..+|++.. ...|++||++++++|++++++
T Consensus 401 ~~~~iv~f~~~~~~----------~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~ 470 (475)
T 3k40_A 401 INMGLVCFRLKGSN----------ERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFTQSEDMEYSWKEVSAAADE 470 (475)
T ss_dssp CBTTEEEEEESSCH----------HHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEeCCch----------HHHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 23345556554211 134568888888886543 2 23 35999964 345899999999999998876
Q ss_pred HH
Q 010250 503 TE 504 (514)
Q Consensus 503 ~~ 504 (514)
+.
T Consensus 471 ~~ 472 (475)
T 3k40_A 471 ME 472 (475)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 221
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.65 E-value=8.6e-15 Score=149.26 Aligned_cols=318 Identities=13% Similarity=0.089 Sum_probs=192.4
Q ss_pred CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHH-HHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCcc
Q 010250 117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKEL-LEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 195 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L-~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~ 195 (514)
..|++++++.+.++...++ ...+...++++.+ +++++ ..+++++++||++|+..+++.+. . ..++
T Consensus 14 ~~~~i~~a~~~~~~~~~~~-----~~~~~~~~l~~~~~a~~~g--~~~~~v~~~sgt~al~~al~~l~------~-~~Gd 79 (377)
T 3ju7_A 14 PVIEYLDELKEIDASHIYT-----NYGPINQRFEQTIMSGFFQ--NRGAVTTVANATLGLMAAIQLKK------R-KKGK 79 (377)
T ss_dssp CGGGGHHHHHHHHHHTCCS-----SSCHHHHHHHHHHHHHTST--TCSEEEEESCHHHHHHHHHHHHS------C-TTCC
T ss_pred CcHHHHHHHHHHHHcCCcc-----cCCHHHHHHHHHHHHHHhC--CCCeEEEeCCHHHHHHHHHHHcC------C-CCcC
Confidence 4678899999988764322 1134567899999 99874 14689999999999999998751 1 3357
Q ss_pred EEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEE
Q 010250 196 KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAA 274 (514)
Q Consensus 196 ~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aa 274 (514)
+||+.+..|.+........+..+. .++.. +.|. .+++++++.+.... .++.+
T Consensus 80 ~Vi~~~~~~~~~~~~~~~~G~~~~-------------~v~~~~~~~~-------------~d~~~l~~~i~~~~-~~tk~ 132 (377)
T 3ju7_A 80 YALMPSFTFPATPLAAIWCGLEPY-------------FIDISIDDWY-------------MDKTVLWDKIEELK-EEVAI 132 (377)
T ss_dssp EEEEESSSCTHHHHHHHHTTCEEE-------------EECBCTTTCS-------------BCHHHHHHHHHHHG-GGEEE
T ss_pred EEEECCCCcHHHHHHHHHcCCEEE-------------EEecCCccCC-------------cCHHHHHHHHhcCC-CCceE
Confidence 899999998775432222211111 11110 1111 11577888773211 12666
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceeccc-CCCCchhchh----hhhcCCcccc
Q 010250 275 FIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKY-SIKPDLVSFA----KALSSAYMPI 349 (514)
Q Consensus 275 vivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~-gv~pDiv~~s----K~l~gG~~pi 349 (514)
|+ |++ ..|...+ +++|.++|+ ||+++|+|++|+ +|.. +..... +...|+.++| |.+++| ..
T Consensus 133 v~--~~~-~~G~~~~----~~~i~~la~-~~~~vi~D~a~a-~g~~---~~~~~~g~~~~d~~~~S~~~~K~l~~g--~g 198 (377)
T 3ju7_A 133 VV--PYA-TFGSWMN----LEEYEELEK-KGVPVVVDAAPG-FGLM---NGGMHYGQDFSGMIIYSFHATKPFGIG--EG 198 (377)
T ss_dssp EC--CBC-GGGBCCC----CHHHHHHHH-TTCCBEEECTTC-TTCE---ETTEETTTTCSSEEEEECBTTSSSCCB--SC
T ss_pred EE--EEC-CCCCccC----HHHHHHHHh-cCCEEEEECCCc-cCCe---ECCEeccCCCCcEEEEECCCCCcCCCC--Cc
Confidence 66 333 3466665 899999999 999999999997 5422 111122 1224666554 998874 45
Q ss_pred eeEEe-CHHHHHHhhhccCC-----CCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCC--
Q 010250 350 GAILV-SPEVSEVIHSQSNT-----LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-- 421 (514)
Q Consensus 350 g~v~~-~~~i~~~l~~~~~~-----~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~-- 421 (514)
|+++. ++++.+.+...... ......+..+..+++.++.+++.++.++ ...++.+++.+++.+.|+++...
T Consensus 199 G~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~l~--~~~~~~~~~~~~~~~~L~~~~~~~~ 276 (377)
T 3ju7_A 199 GLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMKKWD--DKLKERTRISEWYKQLLQSNGLMKK 276 (377)
T ss_dssp EEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHHHHHHTTTTTT
T ss_pred EEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhcCCCCccc
Confidence 66666 56776666532110 0011224456677888888888776553 45677778888888888776321
Q ss_pred CceeEE--EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--------------------------C
Q 010250 422 PIIGEI--RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--------------------------G 473 (514)
Q Consensus 422 ~~~~~v--~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--------------------------g 473 (514)
+..... .....++.+.+.+.. ..+.+.+.|.++||.++.. .
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 345 (377)
T 3ju7_A 277 GWQLQKTEAVIQQFMPILCPEEV-----------RNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAK 345 (377)
T ss_dssp TCBCCCCSCBCCSSEEEECCTTS-----------CHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHH
T ss_pred cccCCCCCcceEEEEEEEeCChh-----------hHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHh
Confidence 111100 001112233332210 1456889999999987631 0
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 474 DNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 474 ~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
..||+......|++|++++++.|++++..
T Consensus 346 ~~l~lp~~~~~t~~di~~v~~~l~~~~~~ 374 (377)
T 3ju7_A 346 RIVSLPLWEGMTKEIVEQIVICLGQKVVS 374 (377)
T ss_dssp HEEEECCCTTCCHHHHHHHHHHHTC----
T ss_pred CEEECCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 35888877789999999999999888764
No 222
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.64 E-value=6.2e-16 Score=158.55 Aligned_cols=273 Identities=12% Similarity=0.085 Sum_probs=162.4
Q ss_pred HHHHHHHHHhcCc----CCC-CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCcc----EEEEEecCCcccceeeeecCCC
Q 010250 147 LDLAKELLEMFTA----SKM-AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK----KFIARQKSYHGSTLIAASLSGL 217 (514)
Q Consensus 147 ~ela~~L~~~~~~----~~~-~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~----~ii~~~~~yHG~t~~~~~~s~~ 217 (514)
.+|.+.+++++.. ... ++|++++++++|+..+++.... + ++ .|++.+++|.+........ |.
T Consensus 71 ~~lr~aia~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~-------~-Gd~~~~~Vlv~~P~y~~~~~~~~~~-g~ 141 (391)
T 3bwn_A 71 PELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALSS-------L-ARSQPVSVVAAAPFYSTYVEETTYV-RS 141 (391)
T ss_dssp HHHHHHHHHHHHHHCSBCCSSSEEEEEEHHHHHHHHHHHHHHH-------T-SSSSSEEEEECSSCCTHHHHHHHTT-CB
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEeCChHHHHHHHHHHhcC-------C-CCCCcceEEEcCCCchhHHHHHHHc-CC
Confidence 5677777766531 123 5899999999999999987641 2 34 7999999998764332221 11
Q ss_pred ccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHH
Q 010250 218 PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKV 297 (514)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l 297 (514)
... .++.. .+.++ . .++.+|++...++.+|.+.+ +|
T Consensus 142 ~~~------------~~~~d-------------------~~~l~------~-~~~k~v~l~~p~NPtG~~~~------~l 177 (391)
T 3bwn_A 142 GMY------------KWEGD-------------------AWGFD------K-KGPYIELVTSPNNPDGTIRE------TV 177 (391)
T ss_dssp TTE------------EEEEE-------------------STTCC------C-CSCEEEEEESSCTTTCCCCC------CC
T ss_pred eEE------------EecCC-------------------HHHcC------C-CCCEEEEECCCCCCCchhHH------HH
Confidence 110 00000 01111 1 23445544444556676653 23
Q ss_pred HHHHHhcC--CEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccceeEEe-CHHHHHHhhhccCCCCcc
Q 010250 298 QAVVKKYD--ILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSF 372 (514)
Q Consensus 298 ~~l~~~~g--illI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~ 372 (514)
.+ ++|+ +++|+||+|. ++.. ..... ..+ .+++ +|||.++..++++|++++ ++++++.+...
T Consensus 178 ~~--~~~~~~~~ii~De~y~-~~~~-~~l~~-~~~--~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~------- 243 (391)
T 3bwn_A 178 VN--RPDDDEAKVIHDFAYY-WPHY-TPITR-RQD--HDIMLFTFSKITGHAGSRIGWALVKDKEVAKKMVEY------- 243 (391)
T ss_dssp C-------CCCEEEEECTTC-STTT-SCCCC-CBC--CSEEEEEHHHHHSCGGGCEEEEEECCHHHHHHHHHH-------
T ss_pred HH--HhhcCCCEEEEeCCCC-CCCC-Ccccc-CCC--CeEEEEechhhcCCCccceEEEEecCHHHHHHHHHH-------
Confidence 33 2266 9999999996 2211 11111 111 2333 789988743389999997 88998887641
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHh---------h---ccHHHHHHHHHHHHHhhhhhccCCCcee---E--------EEe
Q 010250 373 SHGFTYSGHPVSCAVAIEALKIYK---------E---RNIVEQVNKIAPKFQDGVKAFSDSPIIG---E--------IRG 429 (514)
Q Consensus 373 ~~~~t~~~~pl~~aaa~aal~~~~---------~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~---~--------v~g 429 (514)
....+++.+++++.++.++|+... + +++.+.++++.+++.+.|+++....+.. . ...
T Consensus 244 ~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~ 323 (391)
T 3bwn_A 244 IIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLES 323 (391)
T ss_dssp HHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECC
T ss_pred hcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccCCC
Confidence 122245678888888888887532 1 2356677778888888887652111100 0 122
Q ss_pred eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 430 TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS------GDNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 430 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
.|+++++.+.+.. .+...+.++||.+.++ .+.+||+ +..+++++++++++|.+++++
T Consensus 324 ~g~~~~~~~~~~~--------------~~~~~l~~~gV~v~pg~~fg~~~~~iRis--~~~~~e~i~~~~~~L~~~~~~ 386 (391)
T 3bwn_A 324 YPAFAWLGTKEET--------------DLVSELRRHKVMSRAGERCGSDKKHVRVS--MLSREDVFNVFLERLANMKLI 386 (391)
T ss_dssp CCSEEEEEESSSC--------------CHHHHHHHTTEECEEGGGGTCCTTEEEEE--SCSCHHHHHHHHHHHHSCC--
T ss_pred cceEEEecCCcHH--------------HHHHHHHHCCEEEccCCCCCCCCCEEEEE--ecCCHHHHHHHHHHHHHHHHh
Confidence 3456777775311 1456778899999874 3579999 456899999999999988754
No 223
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.62 E-value=1.7e-14 Score=148.29 Aligned_cols=293 Identities=11% Similarity=0.042 Sum_probs=167.8
Q ss_pred CCHHHHHHHHHHHhc-CCcc-ccccccCCchHHHHHHHHHHhcCcCCCCeEEE---eCChhHHHHHHHHHHHHHHhhcCC
Q 010250 117 SEPRLVAAATAQLNT-LPFY-HSFWNRTTKPSLDLAKELLEMFTASKMAKVFF---TNSGSEANDTQVKLVWYYNNALGR 191 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~-~~~~-~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~---~~sGseA~~~Alk~a~~~~~~~~~ 191 (514)
|+++|++|+.+.... ..+. ++.+........+|++.++++++ .+.+++ ++||++|+..+++...
T Consensus 30 n~~~vl~a~~~~~~~~~~~~~~~~~~y~~~~~~~Le~~lA~l~g---~e~alv~p~~~sGt~Ai~~al~all-------- 98 (409)
T 3jzl_A 30 NQAKVLDAFQENKVSDFHFHPSTGYGYDDEGRDTLERVYATVFK---TEAALVRPQIISGTHAISTVLFGIL-------- 98 (409)
T ss_dssp HHHHHHHHHHHTTCCGGGGCCCCTTCTTCHHHHHHHHHHHHHHT---CSEEEEETTSCSHHHHHHHHHHHHC--------
T ss_pred hHHHHHHHHHHhhhhhhccCCCcCCCCChhHHHHHHHHHHHHhC---CCcEEEECCCccHHHHHHHHHHHhc--------
Confidence 467788888775421 1111 11222233446789999999984 355666 8999999999988653
Q ss_pred CCccEEEEEe-cCCcccceeeeecCCC-ccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC
Q 010250 192 PNKKKFIARQ-KSYHGSTLIAASLSGL-PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP 269 (514)
Q Consensus 192 ~~~~~ii~~~-~~yHG~t~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~ 269 (514)
..++.||+.+ +.|.+.... +...+. ......++ ..+..++....++ .+++++++.+.
T Consensus 99 ~~GD~Vl~~~~~~y~~~~~~-~~~~g~~~~~l~~~G---~~~~~v~~~~~g~-------------~d~e~l~~ai~---- 157 (409)
T 3jzl_A 99 RPDDELLYITGQPYDTLEEI-VGIRKQGQGSLKDFH---IGYSSVPLLENGD-------------VDFPRIAKKMT---- 157 (409)
T ss_dssp CTTCEEEECSSSCCTTHHHH-HTSSSSSSSCTGGGT---CEEEECCCCTTSC-------------CCHHHHHHHCC----
T ss_pred CCCCEEEEeCCCCcHhHHHH-HhcccchhhHHHHcC---CEEEEeCCCCCCC-------------cCHHHHHHhcc----
Confidence 3346788887 666654311 000000 00000011 1111222211111 11466766653
Q ss_pred CcEEEEEEcc----ccCCCCcccCChhHHHHHHHHHHh--cCCEEEEechhcCcccccccceecccCCCCchh--chhhh
Q 010250 270 ETIAAFIAEP----VIGAGGVIPPPATYFEKVQAVVKK--YDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKA 341 (514)
Q Consensus 270 ~~~aavivEp----v~~~~G~~~p~~~~L~~l~~l~~~--~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~ 341 (514)
+++++|++++ ++++.|.+.+ +++|.++|++ ||+++|+||+|..+ ..+ .+......|++ +++|.
T Consensus 158 ~~tklV~i~~s~g~p~nptg~v~~----l~~I~~la~~~~~~~~livD~a~~~~-~~~----~~p~~~g~Div~~S~sK~ 228 (409)
T 3jzl_A 158 PKTKMIGIQRSRGYADRPSFTIEK----IKEMIVFVKNINPEVIVFVDNCYGEF-VEY----QEPPEVGADIIAGSLIKN 228 (409)
T ss_dssp TTEEEEEEECSCTTSSSCCCCHHH----HHHHHHHHHHHCTTCEEEEECTTCTT-TSS----CCSGGGTCSEEEEETTSG
T ss_pred CCCeEEEEECCCCCCCCCcCcccc----HHHHHHHHHhhCCCCEEEEeCCcccc-ccc----CCccccCCeEEEECcccc
Confidence 4688999998 8888888876 9999999999 99999999998733 211 11112235776 57899
Q ss_pred hcCCccc-ceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC
Q 010250 342 LSSAYMP-IGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD 420 (514)
Q Consensus 342 l~gG~~p-ig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~ 420 (514)
++|++.+ .|++++++++++.+....... ..+.+.+..+..+.+++..++.+ +...++..+++.++.+.|+++.
T Consensus 229 lgg~~~~~GG~v~~~~~li~~l~~~~~~~---~~g~~~g~~~~~~~~~l~gl~~~--~~r~~~~~~~a~~la~~L~~~g- 302 (409)
T 3jzl_A 229 PGGGLAKTGGYIAGKEALVDLCGYRLTTP---GIGREAGASLYSLLEMYQGFFLA--PHVTAQAIKGARFTAAMLAEFG- 302 (409)
T ss_dssp GGTTTCSSCEEEEECHHHHHHHHHHHSCT---TTGGGCCCCTTCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTT-
T ss_pred CCccCCceEEEEEeCHHHHHHHHHHhccc---cccccccccHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHHHHHhCC-
Confidence 9986444 477889999999886521111 11122222221123344444433 2456778888889999998761
Q ss_pred CCce--eEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCc
Q 010250 421 SPII--GEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM 467 (514)
Q Consensus 421 ~~~~--~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 467 (514)
..+. ....+..+++.+.+.+. .....+++.|+....
T Consensus 303 ~~v~p~~~~~~~~~i~~i~l~~~-----------~~~~~~~~~L~~~~~ 340 (409)
T 3jzl_A 303 VEADPVWDAPRTDLIQSVSFHNK-----------EKMVAFAQAIQAASP 340 (409)
T ss_dssp CEEESCTTSCCSSSCCEEECSCH-----------HHHHHHHHHHHHTSS
T ss_pred CcccCCCCCCCccEEEEEEeCCH-----------HHHHHHHHHHHhcCc
Confidence 1110 00111223666766432 135668888887753
No 224
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.57 E-value=1.5e-13 Score=150.50 Aligned_cols=322 Identities=13% Similarity=0.084 Sum_probs=173.2
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEE-eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFF-TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 221 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~-~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~ 221 (514)
.....++.+.++++++ .+..+| ++++++|+.+++.... ..+++||+..++|+....+.+.++|.....
T Consensus 172 ~~~i~e~e~~lA~~~g---ae~~i~v~nGtt~an~~ai~al~--------~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~ 240 (730)
T 1c4k_A 172 EGPAVAAEKHAARVYN---ADKTYFVLGGSSNANNTVTSALV--------SNGDLVLFDRNNHKSVYNSALAMAGGRPVY 240 (730)
T ss_dssp BTHHHHHHHHHHHHTT---CSEEEEESSHHHHHHHHHHHHHC--------CTTCEEEEETTCCHHHHHHHTTTTCCEEEE
T ss_pred hHHHHHHHHHHHHHHC---CCcEEEECCHHHHHHHHHHHHhc--------CCCCEEEEcCCchHHHHHHHHHHCCCEEEE
Confidence 3456789999999984 344454 5555699999988763 234577777766544332213333322110
Q ss_pred CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh------CCCc-EEEEEEccccCCCCcccCChhHH
Q 010250 222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE------GPET-IAAFIAEPVIGAGGVIPPPATYF 294 (514)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~------~~~~-~aavivEpv~~~~G~~~p~~~~L 294 (514)
... . .+.|... ...+.+.+ +.+.|++++.+. .+.. .++++.+|. ..|.+.+ +
T Consensus 241 v~~--------~---~~~~~i~-g~id~e~L---~~~~le~~i~~~~~~~~~t~~~vklviv~~pn--~~G~v~d----l 299 (730)
T 1c4k_A 241 LQT--------N---RNPYGFI-GGIYDSDF---DEKKIRELAAKVDPERAKWKRPFRLAVIQLGT--YDGTIYN----A 299 (730)
T ss_dssp ECE--------E---ECTTCCE-EEECGGGS---CHHHHHHHTTTSSHHHHTCSCCBSEEEEESBC--TTSEEEC----H
T ss_pred EeC--------C---ccccCcc-CCCCHHHH---hhhHHHHHhhcCCcccccccCCCeEEEEECCC--CCCeecC----H
Confidence 000 0 0000000 00000100 012336666432 1011 345666663 4688876 9
Q ss_pred HHHHHHHHhcCCEEEEechhcC-ccccc--c---cceecccCCC-Cc-hh--chhhhhcCCcccce-eEEeCHHHH----
Q 010250 295 EKVQAVVKKYDILFIADEVICA-FGRLG--T---MFGCDKYSIK-PD-LV--SFAKALSSAYMPIG-AILVSPEVS---- 359 (514)
Q Consensus 295 ~~l~~l~~~~gillI~DEv~tG-~gr~G--~---~~~~~~~gv~-pD-iv--~~sK~l~gG~~pig-~v~~~~~i~---- 359 (514)
++|.++|++||++||+||+|.+ ++..+ . ....+.++.+ |+ ++ +++|+|+| .+.| +++.+++.+
T Consensus 300 ~~I~~la~~~g~~livDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g--~~~gg~I~v~~~~l~g~~ 377 (730)
T 1c4k_A 300 HEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAG--FSQTSQIHKKDSHIKGQL 377 (730)
T ss_dssp HHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSC--CTTCEEEEEECGGGTTST
T ss_pred HHHHHHHHHcCCeEEEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCCC--CCCEEEEEecchhhcCcc
Confidence 9999999999999999999973 22111 1 1112223432 22 44 57899876 4444 453443321
Q ss_pred -----HHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhh-ccCCCceeE-E-E
Q 010250 360 -----EVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKA-FSDSPIIGE-I-R 428 (514)
Q Consensus 360 -----~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~-l~~~~~~~~-v-~ 428 (514)
..+.. .+....+.+.++..+++..++++.+.. +++.+++.++.+++++.|++ +....+... . .
T Consensus 378 ~~i~~~~~~~------~~~~~~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~ 451 (730)
T 1c4k_A 378 RYCDHKHFNN------SFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVN 451 (730)
T ss_dssp TCCCHHHHHH------HHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEET
T ss_pred cccCHHHHHH------HHHHhCCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccc
Confidence 11111 011122445566666666677776654 35678888889999999987 422211110 0 0
Q ss_pred -------------------------------e--eee--e----EEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEE
Q 010250 429 -------------------------------G--TGL--I----LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV 469 (514)
Q Consensus 429 -------------------------------g--~g~--~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~ 469 (514)
+ .+. + +.+..+........+......+..+.+.|.++||.+
T Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v 531 (730)
T 1c4k_A 452 GKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIP 531 (730)
T ss_dssp TEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCC
T ss_pred cccccccccccccccchhhccCccchhccccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEE
Confidence 0 010 0 222221100000000000012566888999999998
Q ss_pred EeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 470 RVSG-DNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 470 ~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
...+ ..+|++++..+|+++++.++++|.+..+...
T Consensus 532 ~~~~~~~ir~~~s~g~t~e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 532 EKSDLNSILFLMTPAETPAKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp SEECSSEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCeEEEEeCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 7655 5699999999999999999999998876553
No 225
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.55 E-value=3.9e-13 Score=138.63 Aligned_cols=294 Identities=12% Similarity=0.049 Sum_probs=166.4
Q ss_pred CCHHHHHHHHHHHhcCC-cc-ccccccCCchHHHHHHHHHHhcCcCCCCeEEE---eCChhHHHHHHHHHHHHHHhhcCC
Q 010250 117 SEPRLVAAATAQLNTLP-FY-HSFWNRTTKPSLDLAKELLEMFTASKMAKVFF---TNSGSEANDTQVKLVWYYNNALGR 191 (514)
Q Consensus 117 ~~p~v~~A~~~~l~~~~-~~-~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~---~~sGseA~~~Alk~a~~~~~~~~~ 191 (514)
|+++|++|+.+...... +. ...+........+++++++++++ .+.+++ ++||++|+..++....
T Consensus 45 n~~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~g~~~Le~~lA~l~g---~e~alv~p~~~sGt~A~~~al~all-------- 113 (427)
T 3hvy_A 45 NQLKVLKAFQEERISESHFTNSSGYGYNDIGRDSLDRVYANIFN---TESAFVRPHFVNGTHAIGAALFGNL-------- 113 (427)
T ss_dssp HHHHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHT---CSEEEEETTCCSHHHHHHHHHHHTC--------
T ss_pred hHHHHHHHHHHHHHHHHhcccCcCCCCCchhHHHHHHHHHHHhC---CCceEEeCCCCcHHHHHHHHHHHhc--------
Confidence 45778888777532110 00 11122233346788999999984 455666 8999999999887653
Q ss_pred CCccEEEEEe-cCCcccc-eeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC
Q 010250 192 PNKKKFIARQ-KSYHGST-LIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP 269 (514)
Q Consensus 192 ~~~~~ii~~~-~~yHG~t-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~ 269 (514)
..++.||+.+ +.|++.. ....+..........++ ..+..++. +.+. .+.+++++++.+.
T Consensus 114 ~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G---~~~~~v~~-~~~~-------------~d~e~l~~~i~~~-- 174 (427)
T 3hvy_A 114 RPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYG---VKYKMVDL-KDGK-------------VDINTVKEELKKD-- 174 (427)
T ss_dssp CTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGT---CEEEECCC-BTTB-------------CCHHHHHHHHHHC--
T ss_pred CCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcC---CEEEEecC-CCCC-------------cCHHHHHHHhhCC--
Confidence 3457888888 7787653 11000000000000011 01111121 1110 1257788877631
Q ss_pred CcEEEEEEcc----ccCCCCcccCChhHHHHHHHHHHh--cCCEEEEechhcCcccccccceecccCCCCchh--chhhh
Q 010250 270 ETIAAFIAEP----VIGAGGVIPPPATYFEKVQAVVKK--YDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKA 341 (514)
Q Consensus 270 ~~~aavivEp----v~~~~G~~~p~~~~L~~l~~l~~~--~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~ 341 (514)
+++++|++++ +.++.|.+.+ +++|+++|++ ||+++|+||+|..+...... .....|++ +++|.
T Consensus 175 ~~tklV~i~~s~gyp~nptg~v~d----l~~i~~ia~~~~~g~~livD~a~~~~~~~~~p-----~~~gaDiv~~S~sK~ 245 (427)
T 3hvy_A 175 DSIKLIHIQRSTGYGWRKSLRIAE----IAEIIKSIREVNENVIVFVDNCYGEFVEEKEP-----TDVGADIIAGSLIKN 245 (427)
T ss_dssp TTEEEEEEESSCCSSSSCCCCHHH----HHHHHHHHHHHCSSSEEEEECTTCTTTSSSCG-----GGGTCSEEEEETTSG
T ss_pred CCCEEEEEECCCCCCCCccccHHH----HHHHHHHHHHhCCCCEEEEECCccccccCCCC-----cccCCeEEEECCccc
Confidence 3578999999 7788887765 9999999999 89999999998743111111 11234766 57899
Q ss_pred hcCCccc-ceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC
Q 010250 342 LSSAYMP-IGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD 420 (514)
Q Consensus 342 l~gG~~p-ig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~ 420 (514)
++|++.+ .|++++++++++.+....... ..+.+.+.++..+..++..++.+ +...++..++..++.+.|+++..
T Consensus 246 lgg~g~~~GG~i~~~~~li~~l~~~~~~~---~~g~~~~~~~~~a~~~~~gl~~~--~~r~~~~~~~a~~la~~L~~~g~ 320 (427)
T 3hvy_A 246 IGGGIATTGGYIAGKEEYVTQATFRVTVP---GIGGECGSTFGVMRSLYEGLFMA--PHVTIEAVKGAVFCARIMELAGF 320 (427)
T ss_dssp GGTTTCCSCEEEEECHHHHHHHHHHHSCT---TTGGGCCCCTTCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccccccceEEEEEECHHHHHHHHHHhhcC---CcccccCCCHHHHHHHHHhHhHH--HHHHHHHHHHHHHHHHHHHhCCC
Confidence 9986444 477888999999887521111 11112222122233344444433 24567788888889888887611
Q ss_pred --CCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250 421 --SPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 466 (514)
Q Consensus 421 --~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 466 (514)
+|. ..-.+..+++.+.+.+.. ....|++.++...
T Consensus 321 ~V~p~-~~~~~~~li~~~~l~~~~-----------~~~~f~~~l~~~~ 356 (427)
T 3hvy_A 321 DVLPK-YNDKRTDIIQAIKFNDEK-----------KLIDFIKGIQTAS 356 (427)
T ss_dssp EEESC-TTSCCSSSEEEEECSSHH-----------HHHHHHHHHHHTC
T ss_pred eecCC-CCCCCceEEEEEeCCCHH-----------HHHHHHHHhcccc
Confidence 010 000112226777764321 3556777777653
No 226
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.54 E-value=4.5e-13 Score=138.17 Aligned_cols=289 Identities=12% Similarity=0.051 Sum_probs=164.9
Q ss_pred CHHHHHHHHHHHh--c-CCccccccccCCchHHHHHHHHHHhcCcCCCCeEEE---eCChhHHHHHHHHHHHHHHhhcCC
Q 010250 118 EPRLVAAATAQLN--T-LPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFF---TNSGSEANDTQVKLVWYYNNALGR 191 (514)
Q Consensus 118 ~p~v~~A~~~~l~--~-~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~---~~sGseA~~~Alk~a~~~~~~~~~ 191 (514)
.++|++|+.+... . ... ...+........+|+++++++++ .+..++ ++||++|+..++....
T Consensus 45 ~~~Vl~A~~~~~~~~~~~~~-~~gy~y~~~~~~~Le~~lA~l~g---~e~alv~p~~~sGt~Ai~~al~all-------- 112 (427)
T 3i16_A 45 QLKVLNAFQEERISEAHFTN-SSGYGYGDIGRDSLDAVYARVFN---TESALVRPHFVNGTHALGAALFGNL-------- 112 (427)
T ss_dssp HHHHHHHHHHTTCCGGGSCC-CCTTCTTCHHHHHHHHHHHHHHT---CSEEEEETTCCSHHHHHHHHHHHHC--------
T ss_pred HHHHHHHHHHhchhHHhcCC-CCCCCCCHHHHHHHHHHHHHHhC---CcceEEeCCCccHHHHHHHHHHHHh--------
Confidence 4677777766421 1 111 11222233346788999999984 345566 8999999999987653
Q ss_pred CCccEEEEEe-cCCcccc-eeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC
Q 010250 192 PNKKKFIARQ-KSYHGST-LIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP 269 (514)
Q Consensus 192 ~~~~~ii~~~-~~yHG~t-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~ 269 (514)
..+++||+.+ +.|++.. ..+...++.......++ ..+..++....+ ..+++++++++.+ .
T Consensus 113 ~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G---~~~~~v~~~~~g-------------~~D~e~l~~~l~~--~ 174 (427)
T 3i16_A 113 RPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFG---INYKQVDLKEDG-------------KPNLEEIEKVLKE--D 174 (427)
T ss_dssp CTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGT---CEEEECCCCTTS-------------SCCHHHHHHHHHT--C
T ss_pred CCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcC---CEEEEecCccCC-------------CcCHHHHHHHhhC--C
Confidence 2346788887 6776653 11111000000000011 011111211000 1125778887753 1
Q ss_pred CcEEEEEEcc----ccCCCCcccCChhHHHHHHHHHHh--cCCEEEEechhcCcccccccceecccCCCCchh--chhhh
Q 010250 270 ETIAAFIAEP----VIGAGGVIPPPATYFEKVQAVVKK--YDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKA 341 (514)
Q Consensus 270 ~~~aavivEp----v~~~~G~~~p~~~~L~~l~~l~~~--~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~ 341 (514)
+++++|++++ ++++.|.+.+ +++|.++|++ ||+++|+||+|..+...... .....|++ +++|.
T Consensus 175 ~~tklV~i~~s~~~p~nptg~i~d----l~~i~~la~~~~~g~~livD~a~~~~~~~~~p-----~~~gaDiv~~S~sK~ 245 (427)
T 3i16_A 175 ESITLVHIQRSTGYGWRRALLIED----IKSIVDCVKNIRKDIICFVDNCYGEFMDTKEP-----TDVGADLIAGSLIKN 245 (427)
T ss_dssp TTEEEEEEECSCCSSSSCCCCHHH----HHHHHHHHHHHCTTSEEEEECTTTTTSSSSCG-----GGGTCSEEEEETTSG
T ss_pred CCCEEEEEEcCCCCCCCCcccHHH----HHHHHHHHHHhCCCCEEEEECCCccccccCCc-----cccCCeEEEecCccc
Confidence 3688999999 7888888866 9999999999 99999999999743211111 11234766 57899
Q ss_pred hcCCc-ccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHH-HHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc
Q 010250 342 LSSAY-MPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVS-CAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS 419 (514)
Q Consensus 342 l~gG~-~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~-~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~ 419 (514)
++|++ ...|++++++++++.+....... ..+.+.+. .+. +..++..++.+ +...++..+++.++.+.|+++
T Consensus 246 lgg~g~~~gG~i~~~~~li~~l~~~~~~~---~~g~~~~~-~~~~a~~~l~gl~~~--~~r~~~~~~~a~~la~~L~~~- 318 (427)
T 3i16_A 246 IGGGIAPTGGYLAGTKDCIEKTSYRLTVP---GIGGECGS-TFGVVRSMYQGLFLA--PHISMEALKGAILCSRIMELA- 318 (427)
T ss_dssp GGTTTCCSCEEEEECHHHHHHHHHHHSCT---TTGGGCCC-CTTCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHT-
T ss_pred CCCCCCceEEEEEECHHHHHHHHHhcccC---ccCccCCc-cHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhC-
Confidence 99865 34578889999999887521110 11111111 022 33333344433 345677888888888888876
Q ss_pred CCCceeEEEee-----eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250 420 DSPIIGEIRGT-----GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 466 (514)
Q Consensus 420 ~~~~~~~v~g~-----g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 466 (514)
+... ..+. .+++.+.+.+.. .+..|++.|+...
T Consensus 319 --g~~V-~p~~~~~~~~~i~~i~l~~~~-----------~~~~f~~~l~~~~ 356 (427)
T 3i16_A 319 --GFEV-MPKYDEKRSDIIQSIKFNDKD-----------KLIEFCKGIQTGS 356 (427)
T ss_dssp --TCEE-ESCTTSCCSSSCEEEECSSHH-----------HHHHHHHHHHHTC
T ss_pred --CCee-cCCCCCCCccEEEEEEECCHH-----------HHHHHHHHHhhcC
Confidence 2110 1112 226777775321 3567888888764
No 227
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.52 E-value=7.6e-14 Score=145.12 Aligned_cols=290 Identities=11% Similarity=0.092 Sum_probs=160.9
Q ss_pred CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee----ecCCCc
Q 010250 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA----SLSGLP 218 (514)
Q Consensus 143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~----~~s~~~ 218 (514)
.+...++.++++++++. +.++++++++|+.++++++..++ . .++++||+.+..|+... ..+ ...|..
T Consensus 107 ~~~~~~~~~~la~~~g~-~~~~i~~~~g~taa~ea~~~a~~-~------~~gd~Viv~~~~h~s~~-~~~~~~a~~~G~~ 177 (438)
T 1wyu_A 107 LQATFEYQTMIAELAGL-EIANASMYDGATALAEGVLLALR-E------TGRMGVLVSQGVHPEYR-AVLRAYLEAVGAK 177 (438)
T ss_dssp HHHHHHHHHHHHHHHTS-SEECSCBSSHHHHHHHHHHHHHH-H------HTCCEEEEETTSCHHHH-HHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHhCC-CccceEEeCcHHHHHHHHHHHHh-c------CCCCEEEEcCccCHhHH-HHHHHHHHHCCCE
Confidence 35567888999998843 33456789988855555543332 1 13467888776664432 111 111211
Q ss_pred cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250 219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 298 (514)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~ 298 (514)
. ..++. +.++.+ +++ + . +++++|++... +..|.+.+ +++|.
T Consensus 178 v------------~~v~~-~~~~~d----------------~~~-i---~-~~t~~v~i~~p-n~tG~~~~----l~~i~ 218 (438)
T 1wyu_A 178 L------------LTLPL-EGGRTP----------------LPE-V---G-EEVGAVVVQNP-NFLGALED----LGPFA 218 (438)
T ss_dssp E------------EEECC-BTTBCC----------------CCC-C---C-TTEEEEEEESS-CTTSBCCC----HHHHH
T ss_pred E------------EEEcC-cCCccC----------------HHH-h---C-CCeEEEEEECC-CCCeEEec----HHHHH
Confidence 1 11111 111110 111 2 1 34666666665 77888876 99999
Q ss_pred HHHHhcCCEEEEech-hcCcccccccceecccCCCCchhchh-hhhc----CCcccceeEEeCHHHHHHhhhcc-----C
Q 010250 299 AVVKKYDILFIADEV-ICAFGRLGTMFGCDKYSIKPDLVSFA-KALS----SAYMPIGAILVSPEVSEVIHSQS-----N 367 (514)
Q Consensus 299 ~l~~~~gillI~DEv-~tG~gr~G~~~~~~~~gv~pDiv~~s-K~l~----gG~~pig~v~~~~~i~~~l~~~~-----~ 367 (514)
++|++||+++|+|-- ++ +|..... ..+ .+|+++++ |.++ .|+..+|++++++++++.+.... .
T Consensus 219 ~la~~~g~~vivd~d~~a-~g~~~~~---~~~--g~D~~~~s~kk~~~~~~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~~ 292 (438)
T 1wyu_A 219 EAAHGAGALFVAVADPLS-LGVLKPP---GAY--GADIAVGDGQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVD 292 (438)
T ss_dssp HHHHHTTCEEEEECCTTG-GGTBCCH---HHH--TCSEEEEECTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEB
T ss_pred HHHHHcCCEEEEEechhh-ccCcCCC---ccC--CCCEEEECCcccCCCccCCCCCeeEEEEcHHHHHhCCCceeccccc
Confidence 999999999996622 32 3322111 122 36888764 6432 12147899999998877653110 0
Q ss_pred CCC--cc------------cccCCCCC---cHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEE
Q 010250 368 TLG--SF------------SHGFTYSG---HPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEI 427 (514)
Q Consensus 368 ~~~--~~------------~~~~t~~~---~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v 427 (514)
..+ .+ ....|++. +.++..++...++.+.+ +++.++..++.+++.+.|+++....+...
T Consensus 293 ~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~- 371 (438)
T 1wyu_A 293 VEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTP- 371 (438)
T ss_dssp TTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSC-
T ss_pred cCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCC-
Confidence 000 00 00123322 23332222223444433 34567788888899998887632221111
Q ss_pred EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEE--Eee----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250 428 RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV--RVS----GDNIMMSPPFIMSPEEVDELISKYGKAL 500 (514)
Q Consensus 428 ~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~--~~~----g~~iRi~p~~~~t~e~id~~~~~l~~~l 500 (514)
...+..+.+.... ....+.+.|.++|+.+ .+. .+.||+++...+|++|+++++++|++++
T Consensus 372 --~~~~~~~~~~~~~-----------~~~~~~~~L~~~gi~v~~~~~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 372 --KPFFNEFALALPK-----------DPEAVRRALAERGFHGATPVPREYGENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp --SSBCSEEEEECSS-----------CHHHHHHHHHHTTCCCCEECCTTSCSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred --CCeEEEEEEeCCC-----------CHHHHHHHHHHCCceeccccccccCCCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 1222222232110 1456888999999998 433 4679999988899999999999998764
No 228
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.51 E-value=2.4e-14 Score=145.12 Aligned_cols=330 Identities=11% Similarity=-0.002 Sum_probs=189.0
Q ss_pred CCCCCHHHHHHHHHHHhcCCcc-cccc------ccCCchHHHHHHHHHHhcCcCCCCeEEE-eCChhHHHHHHHHHHHHH
Q 010250 114 LGGSEPRLVAAATAQLNTLPFY-HSFW------NRTTKPSLDLAKELLEMFTASKMAKVFF-TNSGSEANDTQVKLVWYY 185 (514)
Q Consensus 114 lGh~~p~v~~A~~~~l~~~~~~-~~~~------~~~~~~~~ela~~L~~~~~~~~~~~v~~-~~sGseA~~~Alk~a~~~ 185 (514)
.+.-+|+|++|+.+.+.+.... .+.. ....+...+..+.|+++++..+..+|+| +.|||+|++.+++.....
T Consensus 21 ~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~~~ 100 (377)
T 3e77_A 21 QSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGL 100 (377)
T ss_dssp SCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHGGG
T ss_pred cCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhccCC
Confidence 4456899999999987542110 0100 0012345566778888885433357888 589999999999865310
Q ss_pred HhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHH
Q 010250 186 NNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLIL 265 (514)
Q Consensus 186 ~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~ 265 (514)
..+++++....+.++...... + +.++. .+..++++..+.. . +++++..+
T Consensus 101 ------~~Gd~v~~~~~g~~~~~~~~~-a-------~~~G~---~~~~~~~~~~~~~-~------------~~~~~~~i- 149 (377)
T 3e77_A 101 ------KAGRCADYVVTGAWSAKAAEE-A-------KKFGT---INIVHPKLGSYTK-I------------PDPSTWNL- 149 (377)
T ss_dssp ------STTCEEEECCCSHHHHHHHHH-H-------TTTSE---EEECSCCCSSSCS-C------------CCGGGCCC-
T ss_pred ------CCCCeEEEEECCHHHHHHHHH-H-------HHhCC---ceEEeccCCCcCC-C------------CChHHhcc-
Confidence 113567766666665421100 0 00110 0011111111000 0 01122112
Q ss_pred HhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhc
Q 010250 266 KEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALS 343 (514)
Q Consensus 266 ~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~ 343 (514)
. +++.+|.+-.+.+..|++.| + +|+++|+++++|-+|+ +|.. ..-++.++ ++++| |.+
T Consensus 150 --~-~~t~lV~~~h~et~tG~~~p----i-----i~~~~~~~~~vD~~q~-~g~~--~id~~~~~----~~~~s~~K~~- 209 (377)
T 3e77_A 150 --N-PDASYVYYCANETVHGVEFD----F-----IPDVKGAVLVCDMSSN-FLSK--PVDVSKFG----VIFAGAQKNV- 209 (377)
T ss_dssp --C-TTCSCEEEESEETTTTEECS----S-----CCCCTTCCEEEECTTT-TTSS--CCCGGGCS----EEEEEGGGTT-
T ss_pred --C-CCccEEEEeCccCchheEch----h-----hhccCCCEEEEEcccc-cCCC--CCchhhcC----EEEEeccccc-
Confidence 2 34555555555556688887 3 4789999999999998 5433 33334444 34444 999
Q ss_pred CCcccceeEEeCHHHHHHhhhccCCC---C-cccccCCCCC-cHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHhh
Q 010250 344 SAYMPIGAILVSPEVSEVIHSQSNTL---G-SFSHGFTYSG-HPVSCAVAIEALKIYKER----NIVEQVNKIAPKFQDG 414 (514)
Q Consensus 344 gG~~pig~v~~~~~i~~~l~~~~~~~---~-~~~~~~t~~~-~pl~~aaa~aal~~~~~~----~~~~~~~~~~~~l~~~ 414 (514)
|+ ..+|++++++++.+.+.+..... . ....+.+++. +..+..+..++|+.+.+. ++.++.+++.++++++
T Consensus 210 gp-~G~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~ 288 (377)
T 3e77_A 210 GS-AGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEI 288 (377)
T ss_dssp SC-TTCEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred CC-CccEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHH
Confidence 44 56899999988765443211000 0 0011233333 444555666788887654 3567888888999999
Q ss_pred hhhccCCCc-eeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CEEEEeCCCCCCHHHH
Q 010250 415 VKAFSDSPI-IGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNIMMSPPFIMSPEEV 489 (514)
Q Consensus 415 L~~l~~~~~-~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~iRi~p~~~~t~e~i 489 (514)
|+++....+ ..+. ...+.++.|.+++.... .++...+...+.++||.+.++. ..+|++....+|+|||
T Consensus 289 L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~-------~~~~~~~l~~l~~~Gi~~~~g~~~~g~iRiS~~~~~t~edI 361 (377)
T 3e77_A 289 IDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGD-------DALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDV 361 (377)
T ss_dssp HHTSTTSEECCSCGGGBCSSEEEEEESSTTCC-------HHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHH
T ss_pred HHhcCCceecCCCHHHcCCcEEEEEcCCCCCc-------hhHHHHHHHHHHHCCcEEeCCCCcCCEEEEECCCCCCHHHH
Confidence 887632110 0011 11233567777542210 1122346677788999986541 4599999999999999
Q ss_pred HHHHHHHHHHHHH
Q 010250 490 DELISKYGKALKA 502 (514)
Q Consensus 490 d~~~~~l~~~l~~ 502 (514)
|.+++.|++++++
T Consensus 362 d~l~~al~~~~~~ 374 (377)
T 3e77_A 362 QKLAAFMKKFLEM 374 (377)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988764
No 229
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.51 E-value=5.7e-14 Score=145.58 Aligned_cols=325 Identities=12% Similarity=-0.004 Sum_probs=183.0
Q ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhc-CCcc--ccccc-cCCchHHHHHHHHHHhcCc-----CCCCeEEEe
Q 010250 98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNT-LPFY--HSFWN-RTTKPSLDLAKELLEMFTA-----SKMAKVFFT 168 (514)
Q Consensus 98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~-~~~~--~~~~~-~~~~~~~ela~~L~~~~~~-----~~~~~v~~~ 168 (514)
+.+..+||..|.. .++ .++.+.+++.+.+.. .... +.... + .....+|.+.|++++.. ...++++++
T Consensus 54 ~~~~~i~l~~g~~--~~~-~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G-~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t 129 (427)
T 2hox_A 54 IQGCSADVASGDG--LFL-EEYWKQHKEASAVLVSPWHRMSYFFNPVS-NFISFELEKTIKELHEVVGNAAAKDRYIVFG 129 (427)
T ss_dssp CTTCCEECCSCCC--GGG-HHHHTTSHHHHCEEECTTTTCSSSCSSCC-TTCCHHHHHHHHHHHHHHTCBCCTTCEEEEE
T ss_pred CCCceEEecCcCC--CCC-CCHHHHHhHHhhhhcCCcccccCCCCCCC-ccchHHHHHHHHHHHHHhCCcCCCCCEEEEe
Confidence 3455678766632 232 345677777776632 1111 11111 1 11145666666666531 245799999
Q ss_pred CChhHHHHHHHHHHHHHHh-hcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCC
Q 010250 169 NSGSEANDTQVKLVWYYNN-ALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGE 247 (514)
Q Consensus 169 ~sGseA~~~Alk~a~~~~~-~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (514)
+|+++|+..+++....... .+. ..++.|++.+++|.+........+.... . |..
T Consensus 130 ~G~~~al~~~~~~l~~~~~~~~~-~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~---------~----------~~~----- 184 (427)
T 2hox_A 130 VGVTQLIHGLVISLSPNMTATPD-APESKVVAHAPFYPVFREQTKYFDKKGY---------V----------WAG----- 184 (427)
T ss_dssp SHHHHHHHHHHHHHSCCTTTCTT-SCCEEEEECSSCCHHHHHHHHHSCBTTE---------E----------EEE-----
T ss_pred CCHHHHHHHHHHHHhhccccccC-CCCCEEEEeCCCcccHHHHHHHcCCeee---------e----------ecC-----
Confidence 9999999999987610000 000 3346899999999776433322221110 0 000
Q ss_pred ChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceec
Q 010250 248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCD 327 (514)
Q Consensus 248 ~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~ 327 (514)
+.++|++.+. +++.+|++...++.+|.+.+ +.+ + ++..|.||.+-+ . .....
T Consensus 185 --------d~~~l~~~~~----~~~k~v~l~~p~NPtG~~~~--~~l-------~--~~~~i~d~~~~~----~-~~s~~ 236 (427)
T 2hox_A 185 --------NAANYVNVSN----PEQYIEMVTSPNNPEGLLRH--AVI-------K--GCKSIYDMVYYW----P-HYTPI 236 (427)
T ss_dssp --------EGGGGTTCSC----GGGEEEEEESSCTTTCCCCC--CSS-------T--TCEEEEECTTCS----T-TTSCC
T ss_pred --------CHHHHHHhhc----CCceEEEEcCCCCCcccccH--HHH-------c--CCCEEEeecccC----C-CCCcc
Confidence 0234444332 13344444444556666655 322 2 566788887632 1 11111
Q ss_pred ccCCCCchh--chhhhhcCCcccceeEEe-CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-------
Q 010250 328 KYSIKPDLV--SFAKALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE------- 397 (514)
Q Consensus 328 ~~gv~pDiv--~~sK~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~------- 397 (514)
......+++ +|||.++..++++|++++ ++++++.+... ....+++.+++++.++.++|+...+
T Consensus 237 ~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~-------~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~ 309 (427)
T 2hox_A 237 KYKADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNY-------MTKNTEGTPRETQLRSLKVLKEVVAMVKTQKG 309 (427)
T ss_dssp CSCBCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHH-------HHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCCceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHH-------HHhcCCCCCHHHHHHHHHHhhcchhhhccccc
Confidence 111123444 689988743389999999 58998888641 2223456778888877777764321
Q ss_pred --c----cHHHHHHHHHHHHHhhhhhccCCCc-----------eeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHH
Q 010250 398 --R----NIVEQVNKIAPKFQDGVKAFSDSPI-----------IGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFG 459 (514)
Q Consensus 398 --~----~~~~~~~~~~~~l~~~L~~l~~~~~-----------~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 459 (514)
+ ...++++++.+++.+.|+++....+ +.... .-|+++++.+..+. ..++
T Consensus 310 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~~~-------------~~~~ 376 (427)
T 2hox_A 310 TMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEE-------------DKDC 376 (427)
T ss_dssp STTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSGG-------------GCSH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECCCcH-------------HHHH
Confidence 1 2356677778888888876522111 00111 22566777875311 1144
Q ss_pred HHH-HHCCcEEEee------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250 460 AQC-EKHGMLVRVS------GDNIMMSPPFIMSPEEVDELISKYGKALK 501 (514)
Q Consensus 460 ~~l-~~~Gv~~~~~------g~~iRi~p~~~~t~e~id~~~~~l~~~l~ 501 (514)
..+ .++||.++++ .+.+|++. ..++++|++++++|.++++
T Consensus 377 ~~ll~~~gI~v~pg~~f~~~~~~~Ris~--~~~~e~l~~~l~~l~~~~~ 423 (427)
T 2hox_A 377 YQTFQNGRINTQNGVGFEASSRYVRLSL--IKTQDDFDQLMYYLKDMVK 423 (427)
T ss_dssp HHHHHHTTEECEEGGGGTSCTTEEEEEC--SSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHCCEEEcCCCccCCCCCEEEEEe--cCCHHHHHHHHHHHHHHHh
Confidence 555 4789999874 35799994 5699999999999998874
No 230
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.49 E-value=7.3e-13 Score=133.69 Aligned_cols=329 Identities=11% Similarity=-0.002 Sum_probs=185.8
Q ss_pred EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-cccc-----c-cCCchHHHHHHHHHHhcCcCCCCeEEE-eCChh
Q 010250 101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFW-----N-RTTKPSLDLAKELLEMFTASKMAKVFF-TNSGS 172 (514)
Q Consensus 101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~~~~-----~-~~~~~~~ela~~L~~~~~~~~~~~v~~-~~sGs 172 (514)
+.+.|..|.. --+|+|++|+.+.+.+.... .+.+ + ...+...+..+.+++++...+..+|+| ++|||
T Consensus 5 ~~~~f~pgpt-----~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T 79 (361)
T 3m5u_A 5 RKINFSAGPS-----TLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGAS 79 (361)
T ss_dssp CCEECCSSSC-----CCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHH
T ss_pred ceEeecCCCC-----CCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHH
Confidence 4445555532 14899999999887532110 0100 0 012445566778888885433457888 99999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250 173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY 252 (514)
Q Consensus 173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (514)
||++.+++... ++ +++.....+.++....... +.++ ..+..++++.. .... ..
T Consensus 80 ~a~n~~~~~~~--------~~-~~~~~i~~~~~~~~~~~~a--------~~~G---~~v~~~~~~~~--g~~~-~~---- 132 (361)
T 3m5u_A 80 LQFAMIPMNLA--------LN-GVCEYANTGVWTKKAIKEA--------QILG---VNVKTVASSEE--SNFD-HI---- 132 (361)
T ss_dssp HHHHHHHHHHC--------CS-SCEEEEECSHHHHHHHHHH--------HHTT---CCEEEEEECTT--TTSC-SC----
T ss_pred HHHHHHHHhcC--------CC-CeEEEEeCCHHHHHHHHHH--------HHcC---CceEEEecccC--cCCC-cC----
Confidence 99999998652 22 3343333334443211000 0001 00111111110 0000 00
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCC
Q 010250 253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK 332 (514)
Q Consensus 253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~ 332 (514)
.++ + +. +++.+|.+-.+.+..|++.|. +++ +|+++++|-+|+ +|.. . ++..+
T Consensus 133 ----~~~-~--l~----~~t~lv~~~~~e~~tG~~~~~---------i~~-~~~~~~vD~~q~-~g~~--~--id~~~-- 184 (361)
T 3m5u_A 133 ----PRV-E--FS----DNADYAYICSNNTIYGTQYQN---------YPK-TKTPLIVDASSD-FFSR--K--VDFSN-- 184 (361)
T ss_dssp ----CCC-C--CC----TTSSEEEEESEETTTTEECSS---------CCC-CSSCEEEECGGG-TTSS--C--CCCTT--
T ss_pred ----Chh-h--cC----CCCCEEEEeCCCCCcceeCCc---------ccc-cCCEEEEEcccc-cCCC--C--CCccc--
Confidence 011 2 21 234455554444555887652 333 499999999998 5433 2 22222
Q ss_pred Cchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCcc------cccCCCC-CcHHHHHHHHHHHHHHhhc-c---
Q 010250 333 PDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF------SHGFTYS-GHPVSCAVAIEALKIYKER-N--- 399 (514)
Q Consensus 333 pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~------~~~~t~~-~~pl~~aaa~aal~~~~~~-~--- 399 (514)
.|++++| |.+ |. ..+|++++++++.+.+.+...+ ..+ ..+.+++ .|..+..+..++++.+.+. +
T Consensus 185 ~d~~~~s~~K~~-gp-~G~g~l~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~ 261 (361)
T 3m5u_A 185 IALFYGGVQKNA-GI-SGLSCIFIRKDMLERSKNKQIP-SMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDK 261 (361)
T ss_dssp EEEEEEETTTTS-SC-TTCEEEEEEHHHHHHHHTCCCC-GGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHH
T ss_pred CCEEEEechhcc-CC-CccEEEEEcHHHHhhhcCCCCC-ceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHH
Confidence 4777776 888 44 5689999999998877641000 000 1223333 3445566666889988765 3
Q ss_pred HHHHHHHHHHHHHhhhhhccCC-CceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---C
Q 010250 400 IVEQVNKIAPKFQDGVKAFSDS-PIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---D 474 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l~~~-~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~ 474 (514)
+.++.+++.++++++|+++... ...... .....++.+.+++.. .....+...|.++||.+..+. .
T Consensus 262 i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~----------~~~~~~~~~L~~~gI~~~~g~~~~g 331 (361)
T 3m5u_A 262 VHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKNK----------DLEPLFVKEAEEAGMIGLKGHRILG 331 (361)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESSCT----------THHHHHHHHHHHTTEECCBCCTTTC
T ss_pred HHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCCch----------hhhHHHHHHHHHCCCEEecCCCccC
Confidence 5677888889999998876311 110110 112235666665311 012346688889999986542 4
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 475 NIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 475 ~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
.+|+++...+|++|||.+++.|++..++
T Consensus 332 ~iRiS~~~~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 332 GIRASIYNALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp SEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEccCCCCHHHHHHHHHHHHHHHHh
Confidence 5999999999999999999999988754
No 231
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.48 E-value=6.6e-14 Score=142.63 Aligned_cols=331 Identities=11% Similarity=0.038 Sum_probs=183.6
Q ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc--------cccccccCCchHHHHHHHHHHhcCcCCCCeEEE-eCC
Q 010250 100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF--------YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFF-TNS 170 (514)
Q Consensus 100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~--------~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~-~~s 170 (514)
+.|||..+... -+|+|++|+.+.+.+... .+. .....+...+..+.|+++++..+.++|+| ++|
T Consensus 27 ~~yl~~agpt~------~p~~V~~a~~~~~~~~~~n~~s~~~~~h~-~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~ 99 (386)
T 3qm2_A 27 QVFNFSSGPAM------LPAEVLKLAQQELCDWHGLGTSVMEISHR-GKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGG 99 (386)
T ss_dssp CCEECCSSSCC------CCHHHHHHHTCC------------------------CCHHHHHHHHHHHTCCTTEEEEEEESC
T ss_pred cCccccCCCCC------CCHHHHHHHHHHHHhccccCccccccCCC-CHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCC
Confidence 46788654422 589999999877643211 111 01123455677888888885433357888 689
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCCh
Q 010250 171 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETE 249 (514)
Q Consensus 171 GseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 249 (514)
||||++.+++... ..+++++....+.++....... +.++ .+..++++ ..+...
T Consensus 100 ~T~a~n~ai~~l~--------~~gd~v~~~~~~~~~~~~~~~a--------~~~G----~v~~v~~~~~~~G~~------ 153 (386)
T 3qm2_A 100 GRGQFAGVPLNLL--------GDKTTADYVDAGYWAASAIKEA--------KKYC----APQIIDAKITVDGKR------ 153 (386)
T ss_dssp TTHHHHHHHHHHC--------TTCCEEEEEESSHHHHHHHHHH--------TTTS----EEEEEECEEEETTEE------
T ss_pred chHHHHHHHHhcc--------CCCCeEEEEeCCHHHHHHHHHH--------HHhC----CeEEEecCcccCCCC------
Confidence 9999999998653 2235666666556554211000 0011 01111111 000000
Q ss_pred hHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcc-cCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecc
Q 010250 250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVI-PPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDK 328 (514)
Q Consensus 250 ~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~-~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~ 328 (514)
.++++++..+. +++++|.+-.+.+..|++ .| +++|. +|+++++|-+|+ +|.. ..-++.
T Consensus 154 -----~~~~~~~~~l~----~~t~lV~~~h~et~tG~~i~p----i~~i~-----~g~~~~vDa~qs-~g~~--pidv~~ 212 (386)
T 3qm2_A 154 -----AVKPMREWQLS----DNAAYLHYCPNETIDGIAIDE----TPDFG-----PEVVVTADFSST-ILSA--PLDVSR 212 (386)
T ss_dssp -----EECCGGGCCCC----TTCSCEEECSEETTTTEECCC----CCCCC-----TTCCEEEECTTT-TTSS--CCCGGG
T ss_pred -----CCchHHHhhcC----CCCcEEEEECCcCCcCEecCc----hhhhc-----CCCEEEEEcccc-cCCC--CCCccc
Confidence 00122332222 345567766666677886 65 55553 899999999998 6433 233344
Q ss_pred cCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCC---C-cccccCCC-CCcHHHHHHHHHHHHHHhhc----c
Q 010250 329 YSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTL---G-SFSHGFTY-SGHPVSCAVAIEALKIYKER----N 399 (514)
Q Consensus 329 ~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~---~-~~~~~~t~-~~~pl~~aaa~aal~~~~~~----~ 399 (514)
+++ +..+--|.+ |. ..+|++++++++.+.+.+..... + ....+..+ ..|..+..+..++++.+.+. +
T Consensus 213 ~~~--~~~s~hK~l-GP-~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~ 288 (386)
T 3qm2_A 213 YGV--IYAGAQKNI-GP-AGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAA 288 (386)
T ss_dssp CSE--EEEETTTTT-CC-TTEEEEEEEGGGCSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHH
T ss_pred cCE--EEEeccccc-CC-CccEEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHH
Confidence 432 222333988 44 56899999998765443210000 0 00011222 22334555556777776553 3
Q ss_pred HHHHHHHHHHHHHhhhhhccCCCcee---EE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--
Q 010250 400 IVEQVNKIAPKFQDGVKAFSDSPIIG---EI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-- 473 (514)
Q Consensus 400 ~~~~~~~~~~~l~~~L~~l~~~~~~~---~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-- 473 (514)
+.++.+++.++++++|+++ ++.. +. .....++.|.+++.. ....+...|.++||.+..+.
T Consensus 289 i~~~~~~l~~~l~~~l~~~---~~~~~~~~~~~rs~~iv~f~~~~~~-----------~~~~~~~~L~~~gI~~~~g~~~ 354 (386)
T 3qm2_A 289 MHKINQQKAELLYGVIDNS---DFYRNDVAQANRSRMNVPFQLADNT-----------LDKVFLEESFAAGLHALKGHRV 354 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTC---SSEECCBCGGGBCSSEEEEEESSGG-----------GHHHHHHHHHHTTEECCBCCTT
T ss_pred HHHHHHHHHHHHHHHHHHC---CCcccCCCHHHcCceEEEEECCCcc-----------ccHHHHHHHHHCCCEEeCCCCC
Confidence 5678888889999998876 2211 11 112235666665311 12346677889999886541
Q ss_pred -CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250 474 -DNIMMSPPFIMSPEEVDELISKYGKALKA 502 (514)
Q Consensus 474 -~~iRi~p~~~~t~e~id~~~~~l~~~l~~ 502 (514)
..+|+++...+|++|||.+++.|++..++
T Consensus 355 ~~~iRiS~~~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 355 VGGMRASIYNAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred cCeEEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 35999998889999999999999987754
No 232
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.47 E-value=2.2e-12 Score=142.37 Aligned_cols=318 Identities=12% Similarity=0.055 Sum_probs=175.1
Q ss_pred chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCC
Q 010250 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK 223 (514)
Q Consensus 144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~ 223 (514)
....++.+.+++.++.. +.++++|++++|+..++.... ..+++||+..++|+..... +..+|.....
T Consensus 205 g~v~~~ee~la~l~G~d--~~i~~~~Gtt~a~~~~i~al~--------~~GD~Vlv~~~~h~s~~~~-~~~~G~~~v~-- 271 (755)
T 2vyc_A 205 GAFGESEKYAARVFGAD--RSWSVVVGTSGSNRTIMQACM--------TDNDVVVVDRNCHKSIEQG-LMLTGAKPVY-- 271 (755)
T ss_dssp HHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHHC--------CTTCEEEEESSCCHHHHHH-HHHHCCEEEE--
T ss_pred cHHHHHHHHHHHHhCCC--ceEEECCcHHHHHHHHHHHhc--------CCCCEEEECCCchHHHHHH-HHHcCCEEEE--
Confidence 34567777888887421 234556656788999988763 3346788877776543222 2223321110
Q ss_pred CCCCCCcccccCCC-CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCC------c-EEEEEEccccCCCCcccCChhHHH
Q 010250 224 FDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLANNLEDLILKEGPE------T-IAAFIAEPVIGAGGVIPPPATYFE 295 (514)
Q Consensus 224 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~------~-~aavivEpv~~~~G~~~p~~~~L~ 295 (514)
++.. +.|.. ....+.+. .+.++|++.+.+.... + .+++++.| +..|.+.+ ++
T Consensus 272 ----------v~~~~~~~g~-~g~i~~~~---~d~e~le~~i~~~~~~k~~~~~~~klvil~~p--n~~G~v~d----l~ 331 (755)
T 2vyc_A 272 ----------MVPSRNRYGI-IGPIYPQE---MQPETLQKKISESPLTKDKAGQKPSYCVVTNC--TYDGVCYN----AK 331 (755)
T ss_dssp ----------ECCCBCTTSC-BCCCCGGG---GSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS--CTTSEEEC----HH
T ss_pred ----------EeCCCCcccc-ccccCcCC---CCHHHHHHHHHhCccccccccCCCeEEEEECC--CCCceecC----HH
Confidence 0000 00000 00000000 0257888888642110 1 25666666 34688876 99
Q ss_pred HHHHHHHhcCCEEEEechhcCcccccccc--eecccCCCCch------h--chhhhhcCCccc-ceeEEeCHH---H-HH
Q 010250 296 KVQAVVKKYDILFIADEVICAFGRLGTMF--GCDKYSIKPDL------V--SFAKALSSAYMP-IGAILVSPE---V-SE 360 (514)
Q Consensus 296 ~l~~l~~~~gillI~DEv~tG~gr~G~~~--~~~~~gv~pDi------v--~~sK~l~gG~~p-ig~v~~~~~---i-~~ 360 (514)
+|.++|++||++||+||+|.+.-..+..+ .....+...|+ + +++|+|+| .+ .|+++++++ + ..
T Consensus 332 ~I~~ia~~~~~~livDeA~~~~~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g--~~~g~~i~~~~~~~~i~~~ 409 (755)
T 2vyc_A 332 EAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA--LSQASYIHVREGRGAINFS 409 (755)
T ss_dssp HHHHHHTTTCSEEEEECTTCTTGGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSC--CTTCEEEEEECCBTCCCHH
T ss_pred HHHHHHHHcCCEEEEECcCchhcccCcccCCcchhcCCcCCccCCCeEEEECccccccC--cCCeeeeeecCcccccCHH
Confidence 99999999999999999997431222111 01112300232 3 56799876 34 456666543 1 12
Q ss_pred HhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHhhhhhccC---------CCcee--E
Q 010250 361 VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAFSD---------SPIIG--E 426 (514)
Q Consensus 361 ~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~---------~~~~~--~ 426 (514)
.+.. .+....+.+.+...+++..++++.+..+ ++.+++.++.++++++|+++.. ..... .
T Consensus 410 ~~~~------~~~~~~s~sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~ 483 (755)
T 2vyc_A 410 RFNQ------AYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEV 483 (755)
T ss_dssp HHHH------HHHHTSCSSCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSE
T ss_pred HHHH------HHHHhCCCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchh
Confidence 2221 1111124455677777777788877543 5788889999999999987622 11110 1
Q ss_pred EEe---------------------------------------ee------eeEEEEEccCCCCCCCCCCccchHHHHHHH
Q 010250 427 IRG---------------------------------------TG------LILGTEFADNKSPNEPFPPEWGIGAYFGAQ 461 (514)
Q Consensus 427 v~g---------------------------------------~g------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (514)
+.+ .| ..+.+.......+. .+....-.+..+.+.
T Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G-~~~~~g~~~~~l~~~ 562 (755)
T 2vyc_A 484 VTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDG-ELEETGVPAALVTAW 562 (755)
T ss_dssp EECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTS-SBCSSCCCHHHHHHH
T ss_pred ccccccccccccccccchhccchhhhhccCcccccccccccCCCccccCCeEEEEEcCCCCCCC-CccccCCcHHHHHHH
Confidence 100 01 12223222110000 000000113567788
Q ss_pred HHHCCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250 462 CEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKAT 503 (514)
Q Consensus 462 l~~~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~ 503 (514)
|.++||.+...+ +.+|+..+...|+++++.++++|.+..+..
T Consensus 563 L~~~gI~~e~~~~~~v~~~~~~g~t~~~~~~l~~al~~~~~~~ 605 (755)
T 2vyc_A 563 LGRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHY 605 (755)
T ss_dssp HHTTTCCCSEECSSEEEEECCTTCCTTTTHHHHHHHHHHHHHH
T ss_pred HHHCCCEEeecCCCeEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 888999887544 569999999999999999999998887654
No 233
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.40 E-value=4.1e-11 Score=121.69 Aligned_cols=296 Identities=14% Similarity=0.105 Sum_probs=175.0
Q ss_pred CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241 (514)
Q Consensus 162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
....++.|++|-++.+++..+... ++++.++||+ ...-|-+.+.++.++|.....-. |.+. ++.+
T Consensus 134 ~~~~flVnGsTgg~lamilaa~r~----~rpg~d~VIv-pRn~HKSv~kAliL~Gl~Pv~V~-----p~~d----~~~~- 198 (501)
T 3hl2_A 134 VANCFVVPMATGMSLTLCFLTLRH----KRPKAKYIIW-PRIDQKSCFKSMITAGFEPVVIE-----NVLE----GDEL- 198 (501)
T ss_dssp CCEEEEESSCHHHHHHHHHHHHHH----HCTTCCEEEE-ECCCCHHHHHHHHHTTCEEEEEC-----EEEE----TTEE-
T ss_pred CCcEEEECcHHHHHHHHHHHHcCc----ccCCCCEEEE-ecchHHHHHHHHHHcCCeEEEEe-----eeec----cccc-
Confidence 345666777776777776665422 1233356666 67788888888777775322110 0000 0000
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G 321 (514)
..+++++|++|++.+++.+++|+..|.+..++...+ +++|.++|++||+++++||+|.+.-...
T Consensus 199 ------------~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~dd----I~eIaeIch~~gIpllVDeAhGah~~~~ 262 (501)
T 3hl2_A 199 ------------RTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDR----LEELAVICANYDIPHIVNNAYGVQSSKC 262 (501)
T ss_dssp ------------EECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCC----HHHHHHHHHHHTCCEEEECTTCTTCHHH
T ss_pred ------------CCCHHHHHHHHHhcCCCcEEEEEecCCCCCCccccc----HHHHHHHHHHcCCeEEEeCcchhhhhhh
Confidence 112688999998876678888888776554444444 9999999999999999999986442222
Q ss_pred ccceecccCC-CCchhchh--hhhcCCcccceeEE--e-CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH
Q 010250 322 TMFGCDKYSI-KPDLVSFA--KALSSAYMPIGAIL--V-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY 395 (514)
Q Consensus 322 ~~~~~~~~gv-~pDiv~~s--K~l~gG~~pig~v~--~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~ 395 (514)
..+..+.+.. ..|+++.| |.+- .|+|+.+ . ++++++.+.. ..-++.+++|.. ..+.++..+
T Consensus 263 ~~lp~sA~~~GrAD~vVqS~HK~ll---vpIGG~ii~~~d~e~l~~~~~--------~yPGr~S~Spsl--dl~~tLL~l 329 (501)
T 3hl2_A 263 MHLIQQGARVGRIDAFVQSLDKNFM---VPVGGAIIAGFNDSFIQEISK--------MYPGRASASPSL--DVLITLLSL 329 (501)
T ss_dssp HHHHHHHHHHSCCCEEEEEHHHHHC---CCSSCEEEEESCHHHHHHHHH--------TSCSCBCSHHHH--HHHHHHHHH
T ss_pred hhhHHHHHhcCCCcEEEecccccce---eecCceEEEeCCHHHHHHHHH--------hCCCCCCCcHHH--HHHHHHHHH
Confidence 1111122222 47888877 6442 5555433 3 5677777653 111344555543 233333333
Q ss_pred hh---ccHHHHHHHHHHHHHhhhhhcc-CCC-ceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcE--
Q 010250 396 KE---RNIVEQVNKIAPKFQDGVKAFS-DSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGML-- 468 (514)
Q Consensus 396 ~~---~~~~~~~~~~~~~l~~~L~~l~-~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~-- 468 (514)
-. .++.++..++.++|+++|+++. .++ .+.+......-+++.+...... .......+...|..++|-
T Consensus 330 Gr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~------~~~~~t~~gs~Lf~r~vsG~ 403 (501)
T 3hl2_A 330 GSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEH------RDKAVTQLGSMLFTRQVSGA 403 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTT------TSCHHHHHHHHHHHTTCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEeccccccc------ccccHHHHHHHHHhcCCCcc
Confidence 32 4567888888999999999873 222 1212222223345555432111 111245677888887643
Q ss_pred -EEee--------------C--------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010250 469 -VRVS--------------G--------DNIMMSPPFIMSPEEVDELISKYGKALKATEERV 507 (514)
Q Consensus 469 -~~~~--------------g--------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~ 507 (514)
+.+. | ..+-++...-++++|||.++++|++++.++.++.
T Consensus 404 Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~~ 465 (501)
T 3hl2_A 404 RVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKER 465 (501)
T ss_dssp EEECTTCCEEETTEEESSTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC--
T ss_pred eeecCCCceEECCeeecCcccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 2211 1 3577888888999999999999999998877544
No 234
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.40 E-value=2.8e-11 Score=131.60 Aligned_cols=316 Identities=13% Similarity=0.121 Sum_probs=179.1
Q ss_pred CCchHHHHHHHHHHhcCcCCCCeEEEeCCh-hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccc
Q 010250 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSG-SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPAL 220 (514)
Q Consensus 142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sG-seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~ 220 (514)
+.....++++++++++ +.++++|.++| +.||.+++.... ..+++||+.. ..|.+...++.++|....
T Consensus 193 ~~g~i~eaE~~lA~~f---Ga~~a~~v~nGts~An~~ai~al~--------~pGD~VLv~r-~~H~S~~~~l~lsGa~pv 260 (715)
T 3n75_A 193 HSGPHKEAEQYIARVF---NADRSYMVTNGTSTANKIVGMYSA--------PAGSTILIDR-NCHKSLTHLMMMSDVTPI 260 (715)
T ss_dssp TBTHHHHHHHHHHHHH---TCSEEEEESSHHHHHHHHHHHHHC--------CTTCEEEEES-SCCHHHHHHHHHSCCEEE
T ss_pred CcHHHHHHHHHHHHHh---CCCCceEECcHHHHHHHHHHHHhC--------CCCCEEEECC-CccHHHHHHHHHcCCEEE
Confidence 4455778899999998 44677777777 589888887663 2345666555 445554444555553221
Q ss_pred cCCCCCCCCcccccCCCCcccCCCCCC-ChhHHHHHHHHHHHHHHHHhCCCc--EEEEEEccccCCCCcccCChhHHHHH
Q 010250 221 HQKFDLPAPFVLHTDCPHYWRYAHPGE-TEEEYSTRLANNLEDLILKEGPET--IAAFIAEPVIGAGGVIPPPATYFEKV 297 (514)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~le~li~~~~~~~--~aavivEpv~~~~G~~~p~~~~L~~l 297 (514)
.-.... +.| ..++. +... .+.++|++++.+....+ .++|+++| +..|.+.+ +++|
T Consensus 261 ~v~~~~-----------~~~--gi~~~i~~~~---~d~e~Le~~l~~~~~~k~p~~vivt~p--n~~G~v~d----l~~I 318 (715)
T 3n75_A 261 YFRPTR-----------NAY--GILGGIPQSE---FQHATIAKRVKETPNATWPVHAVITNS--TYDGLLYN----TDFI 318 (715)
T ss_dssp EECCCB-----------CTT--CCBCCCCGGG---GSHHHHHHHHHHSTTCCSCSEEEEESS--CTTSEEEC----HHHH
T ss_pred EEeccc-----------ccc--ccccCccccc---CCHHHHHHHHhhCcCccCceEEEEECC--CCCCccCC----HHHH
Confidence 100000 000 00000 0000 01578888887532111 25777788 66788887 9999
Q ss_pred HHHHHhcCCEEEEechhcCcccccccce-ecc--cCCCCchh-----chhhhhcCCcccceeEEeCHHH-HHHhhhccCC
Q 010250 298 QAVVKKYDILFIADEVICAFGRLGTMFG-CDK--YSIKPDLV-----SFAKALSSAYMPIGAILVSPEV-SEVIHSQSNT 368 (514)
Q Consensus 298 ~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~--~gv~pDiv-----~~sK~l~gG~~pig~v~~~~~i-~~~l~~~~~~ 368 (514)
.++|++++ +|+||+|.+.-..+..+. ... .+..+|++ +++|+|+|- -..|++.++.++ .+.+..
T Consensus 319 ~ela~~~~--livDEAH~~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gl-tqgs~i~v~~~i~~~~~~~---- 391 (715)
T 3n75_A 319 KKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAF-SQASMIHVKGDVNEETFNE---- 391 (715)
T ss_dssp HHHCCCSE--EEEECTTCTTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCC-TTCEEEEEESCCCHHHHHH----
T ss_pred HHHhCcCc--EEEccccccccccCCccccccccccCcCCCEEEEEEecccccccCC-CCeeEEEeCchhhHHHHHH----
Confidence 99998774 799999973212232211 111 12236754 578998861 134666665543 222321
Q ss_pred CCcccccCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhccC------CCcee--EEEe--------
Q 010250 369 LGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSD------SPIIG--EIRG-------- 429 (514)
Q Consensus 369 ~~~~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~------~~~~~--~v~g-------- 429 (514)
.+....|.+.+++.+++..++++.+++ +++.+++.++.++++++|+++.. ..... .+.+
T Consensus 392 --~~~~~~STSpsy~~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (715)
T 3n75_A 392 --AYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRS 469 (715)
T ss_dssp --HHHHTSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCT
T ss_pred --HHHhhcCCCchHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCc
Confidence 112335667888888888889988763 45789999999999999987731 00000 0000
Q ss_pred -----------ee------eeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCEEEEeCCCCCCHHHHHH
Q 010250 430 -----------TG------LILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIMMSPPFIMSPEEVDE 491 (514)
Q Consensus 430 -----------~g------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~iRi~p~~~~t~e~id~ 491 (514)
.+ +=+.+....-... ..+....-.+..+.+.|.++||.+-.. .+.|-+-.+...|++++++
T Consensus 470 ~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~-G~~~~~Gi~g~~~~~~L~~~~I~~E~~d~~~vl~l~s~g~~~~~~~~ 548 (715)
T 3n75_A 470 DSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKD-GTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALS 548 (715)
T ss_dssp TCCTTCCTTCCSSSEEECTTEEEEECSCBCTT-SCBCSSCCCHHHHHHHHHHTTCCCSEEETTEEEEECCTTCCHHHHHH
T ss_pred ccccccccccccCcccCCCeEEEEEcCCCCCC-CccccCCCcHHHHHHHHHHCCCEEEecCCCcEEEEeCCCCCHHHHHH
Confidence 00 0011111110000 000000112456778888899988654 4566666667889999999
Q ss_pred HHHHHHHHHH
Q 010250 492 LISKYGKALK 501 (514)
Q Consensus 492 ~~~~l~~~l~ 501 (514)
++++|.+.-+
T Consensus 549 L~~aL~~~~~ 558 (715)
T 3n75_A 549 LLRALTDFKR 558 (715)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9988876654
No 235
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.30 E-value=1.1e-10 Score=119.94 Aligned_cols=308 Identities=12% Similarity=0.082 Sum_probs=168.0
Q ss_pred HHHHHHHHHhcCcCCCCeEEEeCChh-HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCC
Q 010250 147 LDLAKELLEMFTASKMAKVFFTNSGS-EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFD 225 (514)
Q Consensus 147 ~ela~~L~~~~~~~~~~~v~~~~sGs-eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~ 225 (514)
..+.+.+.++++-......++.|++| .++..++..++.. . ++.++||+. ..-|-+...++.+.|.....-.
T Consensus 101 ~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~----~-~~~~~viv~-r~aHkSv~kAl~l~Gl~p~~v~-- 172 (450)
T 3bc8_A 101 NSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHK----R-PKAKYIIWP-RIDQKSCFKSMVTAGFEPVVIE-- 172 (450)
T ss_dssp HHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHH----C-TTCCEEEEE-CCCCHHHHHHHHHTTCEEEEEC--
T ss_pred HHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchh----h-cCCCEEEEE-CCcHHHHHHHHHHcCCeeEEEE--
Confidence 34555566655433344568888887 5555555555532 1 123456655 4589888888877775322110
Q ss_pred CCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC
Q 010250 226 LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD 305 (514)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~g 305 (514)
+ .+.++.+ ..+.+.|+++|.+..++.+++|++.|.+...|.+.+ +++|.++|++||
T Consensus 173 ---~----~~~~~~~-------------~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~dd----l~~Ia~ia~~~g 228 (450)
T 3bc8_A 173 ---N----VLEGDEL-------------RTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR----LEELAVICANYD 228 (450)
T ss_dssp ---C----EEETTEE-------------ECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC----HHHHHHHHHHHT
T ss_pred ---e----eecCccC-------------CcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecC----HHHHHHHHHHCC
Confidence 0 0000000 112688999998765457888999887665555655 999999999999
Q ss_pred CEEEEechhcCcccccccceecccCC-CCchhchh--hhhcCCcccceeEEe-CHHHHHHhhhccCCCCcccccCCCCCc
Q 010250 306 ILFIADEVICAFGRLGTMFGCDKYSI-KPDLVSFA--KALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGH 381 (514)
Q Consensus 306 illI~DEv~tG~gr~G~~~~~~~~gv-~pDiv~~s--K~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~ 381 (514)
++|++||+|.+.-+....+..+.+.. ..|.+++| |.+... ...+++.. +++..+.+.. .+. .+.+.+
T Consensus 229 i~l~VD~A~G~~~~~~~~l~~~a~~~~~AD~~v~S~HK~l~a~-~~~~~l~~rd~~~~~~~~~------~~~--g~~s~S 299 (450)
T 3bc8_A 229 IPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVP-VGGAIIAGFNEPFIQDISK------MYP--GRASAS 299 (450)
T ss_dssp CCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHSCC-SSCEEEEESCHHHHHHHHH------HSC--SCBCSH
T ss_pred CeEEEECCCchhhhhhHhHHHHHhcccCCCEEEECCccCCCch-hccEEEEecCHHHHHHHHH------Hhh--cCCccc
Confidence 99999999975422211111111111 46888776 766543 44566665 5566665542 111 122234
Q ss_pred HH-HHHHHHHHHHHHhhc---cHHHHHHHHHHHHHhhhhhcc---CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccch
Q 010250 382 PV-SCAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAFS---DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGI 454 (514)
Q Consensus 382 pl-~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~---~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~ 454 (514)
|. .+.+. +..+-.+ ++.++..++.+++++.|+++. ...+.. ....+.-..+.+..-... .+.+
T Consensus 300 psL~l~~~---l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~-~~~~~~~~~~~l~~~~~~-----~~~D- 369 (450)
T 3bc8_A 300 PSLDVLIT---LLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQ-TPHNPISLAMTLKTIDGH-----HDKA- 369 (450)
T ss_dssp HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCC-CTTCSSEEEEECTTTSSS-----SSCH-
T ss_pred HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecC-CccCCCcceeeccccccc-----ccCC-
Confidence 42 22222 2222222 234445677788888888774 322221 100010012222211100 0111
Q ss_pred HHHHHHHHHHCCc---EEE-------------e---------eCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250 455 GAYFGAQCEKHGM---LVR-------------V---------SGDNIMMSPPFIMSPEEVDELISKYGKALKATEE 505 (514)
Q Consensus 455 ~~~~~~~l~~~Gv---~~~-------------~---------~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~ 505 (514)
...+.-.+...|+ -+. . ....|-+..+...+++|+++++++|++.+++.++
T Consensus 370 ~tkl~i~~~~~g~sG~~v~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~ 445 (450)
T 3bc8_A 370 VTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRK 445 (450)
T ss_dssp HHHHHHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CceeEEEecCCCCccceeeecccccchhHHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2234445555552 221 0 1245777777889999999999999998766544
No 236
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=98.72 E-value=6.3e-07 Score=90.80 Aligned_cols=322 Identities=15% Similarity=0.098 Sum_probs=165.3
Q ss_pred CCHHHHHHHHHHHh-cCCcc---ccccccC--CchHHHHHH-HHHHhcCcCCCCe-E-EEeCChhHHHHHHHHHHHHHHh
Q 010250 117 SEPRLVAAATAQLN-TLPFY---HSFWNRT--TKPSLDLAK-ELLEMFTASKMAK-V-FFTNSGSEANDTQVKLVWYYNN 187 (514)
Q Consensus 117 ~~p~v~~A~~~~l~-~~~~~---~~~~~~~--~~~~~ela~-~L~~~~~~~~~~~-v-~~~~sGseA~~~Alk~a~~~~~ 187 (514)
..|.|++|+-..+. ++.-+ .++|++. .+..+.|+. +..++|.....+. | +=.-||+.||.++.....
T Consensus 66 ~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All---- 141 (490)
T 3ou5_A 66 CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALL---- 141 (490)
T ss_dssp CCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHC----
T ss_pred CCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHc----
Confidence 35666666655543 22221 1334333 233444543 4556664221111 1 224589999998887664
Q ss_pred hcCCCCccEEEEEecCCccc-cee------eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHH
Q 010250 188 ALGRPNKKKFIARQKSYHGS-TLI------AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 260 (514)
Q Consensus 188 ~~~~~~~~~ii~~~~~yHG~-t~~------~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 260 (514)
.+.++|+.++-..-|+ |.+ ..+.++. + |.. ++++ ...+ -...|.+.+
T Consensus 142 ----~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~--~---~~~-------~~Y~------vd~~----t~~IDyd~~ 195 (490)
T 3ou5_A 142 ----QPHDRIMGLDLPDGGHLTHGYMSDVKRISATSI--F---FES-------MPYK------LNPK----TGLIDYNQL 195 (490)
T ss_dssp ----C-CCCEECBC----------------------------------------CBC------EETT----TTEECHHHH
T ss_pred ----CCCCEEEecccCCCCcccccccCCCcccccccc--c---ccc-------cccc------cCCC----CCcccHHHH
Confidence 3356788776544333 111 1112221 0 110 0000 0000 011235888
Q ss_pred HHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhchh
Q 010250 261 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVSFA 339 (514)
Q Consensus 261 e~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~~s 339 (514)
+++..+..| ..||+-...-. ...+ +++++++|++.|++|++|-+|. |+--.| .+. ..+.. .|+||.+
T Consensus 196 ~~~A~~~kP---klIi~G~SaY~---r~id---~~~~reIAd~vGA~Lm~DmAHiaGLVA~g-~~p-sP~~~-ADvVTtT 263 (490)
T 3ou5_A 196 ALTARLFRP---RLIIAGTSAYA---RLID---YARMREVCDEVKAHLLADMAHISGLVAAK-VIP-SPFKH-ADIVTTT 263 (490)
T ss_dssp HHHHHHHCC---SEEEECCSSCC---SCCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTT-SSC-CGGGT-CSEEEEE
T ss_pred HHHHhhcCC---CeEEECCccCc---cccC---HHHHHHHHhhcccEEEechhhhhhhhccc-ccC-Ccccc-ceEEecc
Confidence 888877665 35555433211 2222 8999999999999999999976 542222 111 11222 6888765
Q ss_pred --hhhcCCcccceeEEeCH---------------HHHHHhhhccCCCCcccccCCCCCcHHHHHHHHH-HHHH-Hhh--c
Q 010250 340 --KALSSAYMPIGAILVSP---------------EVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIE-ALKI-YKE--R 398 (514)
Q Consensus 340 --K~l~gG~~pig~v~~~~---------------~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~a-al~~-~~~--~ 398 (514)
|.|.| -+-|.+++++ ++.+.+... ..- +..+++-+-..||.+ ++.. +.. .
T Consensus 264 THKTLrG--PrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~a------VFP-g~qggp~~h~IAAkAVaf~Ea~~p~fk 334 (490)
T 3ou5_A 264 THKTLRG--ARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFA------VFP-SLQGGPHNHAIAAVAVALKQACTPMFR 334 (490)
T ss_dssp SSSTTCS--CSCEEEEEECSEEEECC--CCEEECCCHHHHHHH------HTT-TTCSSCCHHHHHHHHHHHHHHHSHHHH
T ss_pred ccccccC--CCceEEEeccccccccccccchhHHHHHHHHHhh------cCc-cccccchHHHHHHHHHHHHHHHhHhHH
Confidence 99998 4667777765 344555431 111 233333222333332 3433 222 3
Q ss_pred cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee------
Q 010250 399 NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS------ 472 (514)
Q Consensus 399 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~------ 472 (514)
+..+++.++.+.|.+.|.+. .+.++..- -...++.+++.+... .+......|.+.||.+-..
T Consensus 335 ~Ya~qVv~NAkaLA~~L~~~-G~~vvsGg-TdnHlvLvDl~~~g~----------tG~~ae~~Le~agItvNkN~iP~D~ 402 (490)
T 3ou5_A 335 EYSLQVLKNARAMADALLER-GYSLVSGG-TDNHLVLVDLRPKGL----------DGARAERVLELVSITANKNTCPGDR 402 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCEEGGGS-CSSSEEEEECGGGTC----------CHHHHHHHHHHTTEECEEECCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCeeecCC-CCceEEEEeccccCC----------CHHHHHHHHHHcCcEECCCCCCCCC
Confidence 45777888888888888765 33333211 012244555543221 1455667788889887521
Q ss_pred ----CCEEEEeCCC----CCCHHHHHHHHHHHHHHHH
Q 010250 473 ----GDNIMMSPPF----IMSPEEVDELISKYGKALK 501 (514)
Q Consensus 473 ----g~~iRi~p~~----~~t~e~id~~~~~l~~~l~ 501 (514)
.+.|||.-|. ...++|++++.+.|.+++.
T Consensus 403 sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 403 SAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp CSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 2469998773 4678999999998888764
No 237
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=39.61 E-value=38 Score=30.49 Aligned_cols=52 Identities=10% Similarity=0.169 Sum_probs=30.6
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCC---CCcc-cCChhHHHHHHHHHHhcCCEEE
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGA---GGVI-PPPATYFEKVQAVVKKYDILFI 309 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~---~G~~-~p~~~~L~~l~~l~~~~gillI 309 (514)
+.|++++..........|++.|.... .|.+ .....|-+.++++|+++|+.+|
T Consensus 112 ~~l~~~i~~~~~~g~~vil~tp~p~~~~~~~~~~~~~~~y~~~~~~vA~~~~v~~i 167 (233)
T 1k7c_A 112 AYLENAAKLFTAKGAKVILSSQTPNNPWETGTFVNSPTRFVEYAELAAEVAGVEYV 167 (233)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCCCCTTTTSSCCCCCCHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCccccCCCccccchHHHHHHHHHHHHHhCCeEE
Confidence 34444444321122356777776432 2332 3344678889999999998887
No 238
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=37.30 E-value=34 Score=30.44 Aligned_cols=37 Identities=24% Similarity=0.209 Sum_probs=30.2
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEE
Q 010250 270 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA 310 (514)
Q Consensus 270 ~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~ 310 (514)
-..++||+|-+.+..|.... ++++.+++++||+.+|.
T Consensus 158 l~Pa~vicEi~~~~dG~mar----~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 158 LQPAGVICELVRDEDGLMMR----LDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp SCSBEEEEEBBCTTTCCBCB----HHHHHHHHHHHTCCEEE
T ss_pred CCceEEEEEEeECCCCCcCC----HHHHHHHHHHcCCcEEE
Confidence 35689999977456677766 89999999999998883
No 239
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=35.63 E-value=78 Score=30.22 Aligned_cols=52 Identities=23% Similarity=0.227 Sum_probs=33.1
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCcccCC--hhHHHHHHHHHHhcCCEEEEec
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPP--ATYFEKVQAVVKKYDILFIADE 312 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~--~~~L~~l~~l~~~~gillI~DE 312 (514)
++++.+.++.+-+.+..-+-.. .+|....+ -+.++++.++|+++|+.+|+|=
T Consensus 72 ~~~~~l~~~~G~N~VRi~~~~~---~~~~~~~~~~~~~ld~~v~~a~~~Gi~VilD~ 125 (327)
T 3pzt_A 72 DSLKWLRDDWGITVFRAAMYTA---DGGYIDNPSVKNKVKEAVEAAKELGIYVIIDW 125 (327)
T ss_dssp HHHHHHHHHTCCSEEEEEEESS---TTSTTTCGGGHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHhcCCCEEEEEeEEC---CCCcccCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 4566655555666677655421 22333222 2567888999999999999884
No 240
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=35.62 E-value=41 Score=23.14 Aligned_cols=30 Identities=20% Similarity=0.313 Sum_probs=23.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 010250 483 IMSPEEVDELISKYGKALKATEERVKELKS 512 (514)
Q Consensus 483 ~~t~e~id~~~~~l~~~l~~~~~~~~~~~~ 512 (514)
.-.++++|.+++.+.+.++.+.++...++.
T Consensus 19 GY~~~EVD~FLd~v~~~~~~l~~e~~~L~~ 48 (57)
T 2wuj_A 19 GYDEDEVNEFLAQVRKDYEIVLRKKTELEA 48 (57)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 347899999999999998888776666543
No 241
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=33.88 E-value=53 Score=29.22 Aligned_cols=37 Identities=16% Similarity=0.186 Sum_probs=29.4
Q ss_pred CcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHhcCCEEEE
Q 010250 270 ETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKYDILFIA 310 (514)
Q Consensus 270 ~~~aavivEpv-~~~~G~~~p~~~~L~~l~~l~~~~gillI~ 310 (514)
-..++||+|=+ .+..|.... ++++.+++++||+.+|.
T Consensus 157 l~Pa~vicEiv~~~~dG~mar----~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 157 LQPAGAICEIVSQKDEGSMAH----TDELRVFADEHGLALIT 194 (206)
T ss_dssp SCSBEEEEEBBCSSSTTSBCC----HHHHHHHHHHHTCEEEE
T ss_pred CCceEEEEEEeeeCCCCCcCC----HHHHHHHHHHcCCcEEE
Confidence 35689999983 445676766 89999999999999883
No 242
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=28.44 E-value=72 Score=28.63 Aligned_cols=36 Identities=11% Similarity=0.165 Sum_probs=28.8
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEE
Q 010250 270 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA 310 (514)
Q Consensus 270 ~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~ 310 (514)
-..++||+|-+ +..|.... ++++.+++++||+.+|.
T Consensus 166 l~Pa~vicEi~-~~dG~mar----~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 166 FKPAGVLCELT-NDDGTMAR----APECIEFANKHNMALVT 201 (217)
T ss_dssp SCSCEEEEEBB-CTTSSBCC----HHHHHHHHHHTTCEEEE
T ss_pred CCceEEEEEEe-CCCCCccC----HHHHHHHHHHcCCCEEE
Confidence 35688999866 55577766 89999999999998883
No 243
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=26.62 E-value=78 Score=28.59 Aligned_cols=36 Identities=11% Similarity=0.136 Sum_probs=29.4
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEE
Q 010250 270 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA 310 (514)
Q Consensus 270 ~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~ 310 (514)
-..++||+|=++- .|.... ++++.+++++||+.+|.
T Consensus 177 l~Pa~VicEi~~d-dG~mar----~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 177 LVPITTICEMMGD-DGNAMS----KNETKRYAEKHNLIYLS 212 (227)
T ss_dssp SCSEEEEEEEBCT-TSSBCC----HHHHHHHHHHHTCCEEE
T ss_pred CCceEEEEEEeCC-CCCcCC----HHHHHHHHHHcCCcEEE
Confidence 4578999998854 466766 89999999999998883
No 244
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=26.53 E-value=76 Score=26.61 Aligned_cols=56 Identities=18% Similarity=0.250 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH-HHHHhcCCE-EEEechhc
Q 010250 257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ-AVVKKYDIL-FIADEVIC 315 (514)
Q Consensus 257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~-~l~~~~gil-lI~DEv~t 315 (514)
.+.|.+++.+ .++..|+++-..++.|...+.....++.. .+++++++. ..+||-+|
T Consensus 44 ~~~l~~li~~---~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~T 101 (150)
T 1vhx_A 44 LSRLSELIKD---YTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLT 101 (150)
T ss_dssp HHHHHHHHTT---SEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSC
T ss_pred HHHHHHHHHH---cCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCC
Confidence 4778888864 35666777644455555443322223333 455566875 45799876
No 245
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=24.14 E-value=1.8e+02 Score=27.04 Aligned_cols=53 Identities=21% Similarity=0.199 Sum_probs=32.6
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCcccCC--hhHHHHHHHHHHhcCCEEEEech
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPP--ATYFEKVQAVVKKYDILFIADEV 313 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~--~~~L~~l~~l~~~~gillI~DEv 313 (514)
++++.+..+.+-+.+..-+-- ..+|....+ .+.|+++.+.|+++|+.+|+|=-
T Consensus 47 ~~~~~l~~~~G~N~VRip~~~---~~~~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H 101 (303)
T 7a3h_A 47 ESMKWLRDDWGINVFRAAMYT---SSGGYIDDPSVKEKVKEAVEAAIDLDIYVIIDWH 101 (303)
T ss_dssp HHHHHHHHHTCCCEEEEEEES---STTSTTTCTTHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHhcCCCEEEEEEEe---CCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 455554434455666665542 122333222 25677889999999999999854
No 246
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=20.56 E-value=65 Score=29.50 Aligned_cols=19 Identities=21% Similarity=0.489 Sum_probs=15.9
Q ss_pred HHHHHHHHHhcCCEEEEec
Q 010250 294 FEKVQAVVKKYDILFIADE 312 (514)
Q Consensus 294 L~~l~~l~~~~gillI~DE 312 (514)
.++++++|++||+.||+++
T Consensus 85 a~~l~~l~~~~~~~liInd 103 (243)
T 3o63_A 85 CEILADAAHRYGALFAVND 103 (243)
T ss_dssp HHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHhhCCEEEEeC
Confidence 4679999999999888844
No 247
>2fqm_A Phosphoprotein, P protein; negative strand RNA virus, polymerase, replication, cofactor, viral protein; 2.30A {Vesicular stomatitis indiana virus} SCOP: d.378.1.1
Probab=20.51 E-value=1.5e+02 Score=21.09 Aligned_cols=31 Identities=10% Similarity=0.178 Sum_probs=26.3
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250 474 DNIMMSPPFIMSPEEVDELISKYGKALKATE 504 (514)
Q Consensus 474 ~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~ 504 (514)
..+++.||...|.++-+.-...|+.+.+..+
T Consensus 18 KsL~Lf~P~gLt~~Q~~QW~~TIeav~qSak 48 (75)
T 2fqm_A 18 KTLRLTLPEGLSGEQKSQWMLTIKAVVQSAK 48 (75)
T ss_dssp EEEEEECCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEeCCCCccHHHHHHHHHHHHHHHhhhc
Confidence 5699999999999999998888888776543
No 248
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=20.14 E-value=2.5e+02 Score=20.12 Aligned_cols=53 Identities=6% Similarity=0.037 Sum_probs=28.7
Q ss_pred HHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCccc
Q 010250 146 SLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGS 207 (514)
Q Consensus 146 ~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~ 207 (514)
..++.+.+.++-...+..-|++|.+|.-+..++-.+.. .+-+.+... ++|..+
T Consensus 26 ~~~l~~~~~~l~~~~~~~ivv~C~~g~rs~~aa~~L~~--------~G~~~v~~l-GG~~~w 78 (85)
T 2jtq_A 26 LKEVKERIATAVPDKNDTVKVYCNAGRQSGQAKEILSE--------MGYTHVENA-GGLKDI 78 (85)
T ss_dssp HHHHHHHHHHHCCCTTSEEEEEESSSHHHHHHHHHHHH--------TTCSSEEEE-EETTTC
T ss_pred HHHHHHHHHHhCCCCCCcEEEEcCCCchHHHHHHHHHH--------cCCCCEEec-cCHHHH
Confidence 34566666655222233456778888877666655442 122345555 666554
No 249
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=20.14 E-value=1.2e+02 Score=27.50 Aligned_cols=37 Identities=14% Similarity=0.109 Sum_probs=29.1
Q ss_pred CcEEEEEEccccCC----------CCcccCChhHHHHHHHHHHhcCCEEEE
Q 010250 270 ETIAAFIAEPVIGA----------GGVIPPPATYFEKVQAVVKKYDILFIA 310 (514)
Q Consensus 270 ~~~aavivEpv~~~----------~G~~~p~~~~L~~l~~l~~~~gillI~ 310 (514)
-..++||+|-++-. .|.... ++++.+++++||+.+|.
T Consensus 166 l~PagVicEi~~~~~~~~~~~~~~dG~mar----~~~l~~fA~~h~L~iit 212 (233)
T 1k4i_A 166 KRPVAVISEIVDDGQEVEGRAVRAAPGMLR----GDECVAFARRWGLKVCT 212 (233)
T ss_dssp CCSBEEEEEBEECCEECTTSSCEESCEECC----HHHHHHHHHHTTCEEEE
T ss_pred CCceEEEEEeCCCcccccccccCCCCCcCC----HHHHHHHHHHcCCcEEE
Confidence 45689999877541 466766 89999999999998884
No 250
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=20.00 E-value=1.8e+02 Score=27.07 Aligned_cols=53 Identities=13% Similarity=0.128 Sum_probs=32.0
Q ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCcccCCh---hHHHHHHHHHHhcCCEEEEech
Q 010250 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPA---TYFEKVQAVVKKYDILFIADEV 313 (514)
Q Consensus 258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~---~~L~~l~~l~~~~gillI~DEv 313 (514)
++++.+.++.+-+.+..-+. +. ..|....+. +.|+++.+.|+++|+.+|+|--
T Consensus 46 ~d~~~l~~~~G~N~vRi~~~-~~--~~~~~~~~~~~l~~ld~~v~~a~~~Gl~vild~h 101 (306)
T 2cks_A 46 SSLDALAYDWKADIIRLSMY-IQ--EDGYETNPRGFTDRMHQLIDMATARGLYVIVDWH 101 (306)
T ss_dssp HHHHHHHHTSCCSEEEEEEE-SS--TTSGGGCHHHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEEee-ec--CCCcccCHHHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 45555544445556666443 11 123222222 4577889999999999999843
Done!