RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= 010250
(514 letters)
>gnl|CDD|215405 PLN02760, PLN02760, 4-aminobutyrate:pyruvate transaminase.
Length = 504
Score = 1027 bits (2657), Expect = 0.0
Identities = 430/509 (84%), Positives = 467/509 (91%), Gaps = 6/509 (1%)
Query: 6 MVTSKLLQSSLKSQIGSFTKHFSASKSLSENLYQIPLLARFYGTDASSQKEDSTTNGFKG 65
M+ LL+SS +S + KH++A+ SL+ P AR + T+AS QKEDS NGFKG
Sbjct: 1 MIARNLLRSSARSTQVNLLKHYAATASLA------PASARIFSTEASLQKEDSEENGFKG 54
Query: 66 HDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAA 125
HDMLAPFTAGWQSTD+ PLVIEKSEGSYVYD+NGKKYLD+LAGLWCTALGGSEPRLVAAA
Sbjct: 55 HDMLAPFTAGWQSTDLEPLVIEKSEGSYVYDINGKKYLDALAGLWCTALGGSEPRLVAAA 114
Query: 126 TAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYY 185
T QLN LPFYHSFWNRTTKPSLDLAKELLEMFTA KM KVFFTNSGSEANDTQVKLVWYY
Sbjct: 115 TEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYY 174
Query: 186 NNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHP 245
NNALGRPNKKKFIAR KSYHGSTLI+ASLSGLPALHQKFDLPAPFVLHTDCPHYWR+ P
Sbjct: 175 NNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLP 234
Query: 246 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD 305
GETEEE+STRLA+NLE+LILKEGPETIAAFIAEPV+GAGGVIPPPATYFEK+QAV+KKYD
Sbjct: 235 GETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYD 294
Query: 306 ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQ 365
ILFIADEVICAFGRLGTMFGCDKY+IKPDLVS AKALSSAYMPIGA+LVSPE+S+VIHSQ
Sbjct: 295 ILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQ 354
Query: 366 SNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIG 425
SN LGSF+HGFTYSGHPVSCAVA+EALKIYKERNI E VNKIAP+FQDG+KAFS SPIIG
Sbjct: 355 SNKLGSFAHGFTYSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAFSGSPIIG 414
Query: 426 EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMS 485
EIRGTGLILGTEF DNKSPN+PFP EWG+GAYFGA+C+K GMLVRV+GDNIMMSPP I++
Sbjct: 415 EIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAGDNIMMSPPLIIT 474
Query: 486 PEEVDELISKYGKALKATEERVKELKSQQ 514
PEEVDELIS YGKALKATEERV ELKSQ+
Sbjct: 475 PEEVDELISIYGKALKATEERVAELKSQK 503
>gnl|CDD|180401 PRK06105, PRK06105, aminotransferase; Provisional.
Length = 460
Score = 660 bits (1704), Expect = 0.0
Identities = 232/441 (52%), Positives = 312/441 (70%), Gaps = 1/441 (0%)
Query: 69 LAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQ 128
L P+T + + PLVIE+ EG YVYD GK+Y++ +AGLW ALG SE RLV AA Q
Sbjct: 17 LHPYTNARRHEEEGPLVIERGEGIYVYDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQ 76
Query: 129 LNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNA 188
+ LPFYH+F +++ P +DLA++L+ M M+KVFFTNSGSEANDT VKLVWYYNNA
Sbjct: 77 MKKLPFYHTFSHKSHGPVIDLAEKLVAM-APVPMSKVFFTNSGSEANDTVVKLVWYYNNA 135
Query: 189 LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET 248
LGRP KKK I+RQ+ YHG T+ +ASL+GLP H+ FDLP +LHT CPHY+R+ PGE+
Sbjct: 136 LGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGES 195
Query: 249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILF 308
EE ++TRLAN LE LIL EGP+TIAAFI EPV+GAGGVI PP TY+EK+QAV++KYDIL
Sbjct: 196 EEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILL 255
Query: 309 IADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNT 368
+ADEVIC FGR G MFGC+ + IKPD++ +K LSS+Y P+ A+L++ +V + I +S
Sbjct: 256 VADEVICGFGRTGNMFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGK 315
Query: 369 LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR 428
+G+F HGFT SGHPV+ AVA+E L I +ER++V + + Q ++A +D P++GE+R
Sbjct: 316 IGTFGHGFTASGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRALADHPLVGEVR 375
Query: 429 GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEE 488
G GLI E +K+ PF P +GA A +HG++ R GD + PP I++ +
Sbjct: 376 GVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAMGDTLAFCPPLIITAAQ 435
Query: 489 VDELISKYGKALKATEERVKE 509
VDE++ ++G+AL V
Sbjct: 436 VDEMVDRFGRALDDVAAWVAA 456
>gnl|CDD|223239 COG0161, BioA, Adenosylmethionine-8-amino-7-oxononanoate
aminotransferase [Coenzyme metabolism].
Length = 449
Score = 535 bits (1380), Expect = 0.0
Identities = 183/443 (41%), Positives = 264/443 (59%), Gaps = 14/443 (3%)
Query: 71 PFTAGWQSTD--VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQ 128
PFT Q D P VI ++EG Y+ D++G++YLD ++GLWC G P + A Q
Sbjct: 16 PFT---QMRDPLAEPRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQ 72
Query: 129 LNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNA 188
L+ LP F T +P+++LA++L E+ + VFFT+SGSEA +T +K+ Y A
Sbjct: 73 LDKLPHVM-FGGFTHEPAIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRA 131
Query: 189 LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK-FDLPAPFVLHTDCPHYWRYAHPGE 247
G+P +KKFI+R+ YHG TL A S+ G AL +D P VLH P+ +R GE
Sbjct: 132 RGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGE 191
Query: 248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIG-AGGVIPPPATYFEKVQAVVKKYDI 306
+EE+ A+ LE LIL+ GPETIAAFI EPV+G AGG++ PP Y ++V+ + KY I
Sbjct: 192 GDEEF-AEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGI 250
Query: 307 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQS 366
L IADEV FGR G MF C+ I PD++ AK L+ Y+P+ A+L S + E
Sbjct: 251 LLIADEVATGFGRTGKMFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGD 310
Query: 367 NTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA-FSDSPIIG 425
G+F HG TYSG+P++CA A+ L I +E +++E+V +I Q G++A +D P++G
Sbjct: 311 --AGAFMHGHTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVG 368
Query: 426 EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMS 485
++RG GLI E +K+ PF E +GA A + G+L+R GD I + PP I++
Sbjct: 369 DVRGLGLIGAIELVADKATKTPF--EARVGARVRAAALERGLLIRPLGDVIYLMPPLIIT 426
Query: 486 PEEVDELISKYGKALKATEERVK 508
EE+DEL+ +AL T +
Sbjct: 427 REEIDELVDALREALDETLADLL 449
>gnl|CDD|180994 PRK07480, PRK07480, putative aminotransferase; Validated.
Length = 456
Score = 510 bits (1316), Expect = e-179
Identities = 190/453 (41%), Positives = 277/453 (61%), Gaps = 22/453 (4%)
Query: 73 TAGWQSTD----VHPL------------VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG 116
TA Q+ D +HP VI ++EG Y++D G K LD +AGLWC +G
Sbjct: 7 TAELQALDAAHHLHPFSDMKALNEKGSRVITRAEGVYLWDSEGNKILDGMAGLWCVNVGY 66
Query: 117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 176
L AA Q+ LP+Y++F+ T P+++LA +L E+ VFFTNSGSEAND
Sbjct: 67 GRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEV-APPGFNHVFFTNSGSEAND 125
Query: 177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC 236
T +++V +Y G+P KK I+R+ YHGST+ ASL G+ +H++ DLP P ++H D
Sbjct: 126 TVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQ 185
Query: 237 PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEK 296
P+++ T EE+ A LE IL+ G + +AAFI EP+ GAGGVI PPATY+ +
Sbjct: 186 PYWFGEG-GDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPE 244
Query: 297 VQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSP 356
+Q + +KYDIL +ADEVIC FGR G FG + IKPDL++ AK L+S Y+P+GA+ V
Sbjct: 245 IQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGD 304
Query: 357 EVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQV-NKIAPKFQDGV 415
V+EV+ + G F+HGFTYSGHPV+ AVA+ L+I ++ IVE+V + P Q +
Sbjct: 305 RVAEVLIEEG---GEFNHGFTYSGHPVAAAVALANLRILRDEGIVERVRDDTGPYLQKRL 361
Query: 416 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN 475
+ +D P++GE+RG GL+ E +K+ E F G+G C +G+++R GD
Sbjct: 362 RELADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAVGDR 421
Query: 476 IMMSPPFIMSPEEVDELISKYGKALKATEERVK 508
+++SPP +++ E+DEL+ K KAL AT +
Sbjct: 422 MIISPPLVITHAEIDELVEKARKALDATAAELG 454
>gnl|CDD|236026 PRK07482, PRK07482, hypothetical protein; Provisional.
Length = 461
Score = 491 bits (1265), Expect = e-171
Identities = 186/429 (43%), Positives = 273/429 (63%), Gaps = 4/429 (0%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
++E EG + D G++Y+D+ AGL+C +G + A Q L +YH++
Sbjct: 33 GRIVEGGEGIRITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHG 92
Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
T+ S+ L+K +++ A M+KV++ SGS+AN+TQ+KLVWYYNN LGRP KKK I+R +
Sbjct: 93 TEASITLSKRIIDRAPA-GMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWR 151
Query: 203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 262
YHGS ++ SL+GL HQ FDLP VLHT+ PHY+R A G +EE++S A+ LE+
Sbjct: 152 GYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEE 211
Query: 263 LILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT 322
LIL EGP+TIAAFIAEPV+G GG++PPPA Y+ +QAV+KKYDIL IADEV+ FGRLG+
Sbjct: 212 LILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGS 271
Query: 323 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 382
MFG D Y I+PDL++ AK L+SAY P+ +V +V +V+ S+ G+ HG+TYSGHP
Sbjct: 272 MFGSDHYGIEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHP 331
Query: 383 VSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK-AFSDSPIIGEIRGTGLILGTEFADN 441
+ A A+ L I + N+V ++ F+ ++ AF D P++GE+RG G++ EF +
Sbjct: 332 ICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVAD 391
Query: 442 KSPNEPFPPEWGIGAYFGAQCEKHGMLVRV--SGDNIMMSPPFIMSPEEVDELISKYGKA 499
+ PF P IG A + G++ R GD + +PP +++ E DE+++ A
Sbjct: 392 RDDRTPFDPALKIGPQVSAAALERGVIARAMPHGDILGFAPPLVLTRAEADEIVAIAKDA 451
Query: 500 LKATEERVK 508
+ R+
Sbjct: 452 VDEVLGRLL 460
>gnl|CDD|99735 cd00610, OAT_like, Acetyl ornithine aminotransferase family. This
family belongs to pyridoxal phosphate (PLP)-dependent
aspartate aminotransferase superfamily (fold I). The
major groups in this CD correspond to ornithine
aminotransferase, acetylornithine aminotransferase,
alanine-glyoxylate aminotransferase, dialkylglycine
decarboxylase, 4-aminobutyrate aminotransferase,
beta-alanine-pyruvate aminotransferase,
adenosylmethionine-8-amino-7-oxononanoate
aminotransferase, and glutamate-1-semialdehyde
2,1-aminomutase. All the enzymes belonging to this
family act on basic amino acids and their derivatives
are involved in transamination or decarboxylation.
Length = 413
Score = 423 bits (1091), Expect = e-146
Identities = 146/427 (34%), Positives = 235/427 (55%), Gaps = 31/427 (7%)
Query: 78 STDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS 137
+ +PLVI ++EG+Y+YDV+G +YLD L+G+ LG + P +V A QL L +
Sbjct: 14 TVRPYPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSL 73
Query: 138 FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF 197
+ +P+++LA+ LL + T + KVFF NSG+EA + +KL Y +KK
Sbjct: 74 GFF-YNEPAVELAELLLAL-TPEGLDKVFFVNSGTEAVEAALKLARAYTG------RKKI 125
Query: 198 IARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257
I+ + +YHG TL A SL+G F P VLH P+ +R LA
Sbjct: 126 ISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPP----------AELA 175
Query: 258 NNLEDLI--LKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 315
++LE L L+E PE +AA I EP+ G GGVI PP Y + ++ + +K+ IL IADEV
Sbjct: 176 DDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQT 235
Query: 316 AFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHG 375
FGR G MF + + ++PD+V+ K L +P+GA+L E+ + G HG
Sbjct: 236 GFGRTGKMFAFEHFGVEPDIVTLGKGLGGG-LPLGAVLGREEIMDAFP-----AGPGLHG 289
Query: 376 FTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA-FSDSPIIGEIRGTGLIL 434
T+ G+P++CA A+ L++ +E ++E ++ ++ ++ P++G++RG GL++
Sbjct: 290 GTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMI 349
Query: 435 GTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDELI 493
G E +++ PP+ + A + G+L+R SG N I + PP I++ EE+DE +
Sbjct: 350 GIELVKDRATK---PPDKELAAKIIKAALERGLLLRPSGGNVIRLLPPLIITEEEIDEGL 406
Query: 494 SKYGKAL 500
+AL
Sbjct: 407 DALDEAL 413
>gnl|CDD|235913 PRK07036, PRK07036, hypothetical protein; Provisional.
Length = 466
Score = 417 bits (1075), Expect = e-142
Identities = 159/435 (36%), Positives = 251/435 (57%), Gaps = 9/435 (2%)
Query: 75 GWQSTDVH----PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 130
W LVI ++EG YV D +G++YLD + G+WC +G + A Q
Sbjct: 22 PWHDFSSLGKEGSLVIVEAEGIYVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQAR 81
Query: 131 TLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALG 190
LP+Y F + T P+ +LA +L E+ + VF T GS A D+ ++ V YY N G
Sbjct: 82 RLPYYTPFGDMTNAPAAELAAKLAEL-APGDLNHVFLTTGGSTAVDSALRFVHYYFNVRG 140
Query: 191 RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHP-GETE 249
RP KK I R +YHGST + ASL+G A +FD + V H P+ +R P G +E
Sbjct: 141 RPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYR--RPAGMSE 198
Query: 250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFI 309
+ L + ED IL G + IAAFIAEP++G+GGVI PP Y +++ + ++YDIL+I
Sbjct: 199 AAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYI 258
Query: 310 ADEVICAFGRLGTMFGCDK-YSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNT 368
+DEV+ FGRLG F + + I+PD+++FAK L+S Y P+GA+++S + +VI +
Sbjct: 259 SDEVVTGFGRLGHFFASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDVISGPNAK 318
Query: 369 LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR 428
F+HGFTYSGHPV+CA A++ ++I + + E V ++ P F++ + + + P++G++R
Sbjct: 319 GNVFTHGFTYSGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASLRELPLVGDVR 378
Query: 429 GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEE 488
G L+ E +K P + IG C++ G+LVR ++SPP I++ +
Sbjct: 379 GDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPLEHLCVLSPPLIITRAQ 438
Query: 489 VDELISKYGKALKAT 503
+DE+++ A++ T
Sbjct: 439 IDEIVAILRAAIEET 453
>gnl|CDD|168967 PRK07481, PRK07481, hypothetical protein; Provisional.
Length = 449
Score = 379 bits (975), Expect = e-127
Identities = 150/440 (34%), Positives = 246/440 (55%), Gaps = 1/440 (0%)
Query: 68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATA 127
P + P++I + +G YVYD++GKK LD + GLW +G + + A
Sbjct: 10 FWHPMAHPAEMKARPPIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVR 69
Query: 128 QLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNN 187
QL+ L +Y +F T +++L+ EL++MF M +VFF++ GS++ +T +KL Y
Sbjct: 70 QLDELEYYSTFDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWK 129
Query: 188 ALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGE 247
G+P + KFI+ ++ YHG+ AS++G + ++ P H + P +R +
Sbjct: 130 VRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQ 189
Query: 248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 307
EE + A LE I +GP+TIAAFIAEPV GAGGVI PPA ++ V+ V ++ IL
Sbjct: 190 DPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGIL 249
Query: 308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSN 367
IADEV+ FGR G+ FG + +KPD++ AK ++S Y+P+GA +V+ +++ + ++
Sbjct: 250 LIADEVVTGFGRTGSWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIADAFEANAD 309
Query: 368 TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-SPIIGE 426
G+ HG+TYSGHPV+CA A+ L I ++ K +G++ + ++G+
Sbjct: 310 FGGAIMHGYTYSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERFELVGD 369
Query: 427 IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSP 486
+RG GL+L + +K+ EP P G ++G+LVR SG I++SPP ++
Sbjct: 370 VRGKGLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPSGTKIILSPPLVIQR 429
Query: 487 EEVDELISKYGKALKATEER 506
E+VD ++ L A +
Sbjct: 430 EDVDRIVDALDAGLSAVPFQ 449
>gnl|CDD|235823 PRK06541, PRK06541, hypothetical protein; Provisional.
Length = 460
Score = 353 bits (909), Expect = e-117
Identities = 158/439 (35%), Positives = 233/439 (53%), Gaps = 21/439 (4%)
Query: 80 DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFW 139
D VI + EG Y++D GK+YLD LAGL+ +G L AA Q TL F+ W
Sbjct: 32 DAPVPVIVRGEGCYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFF-PLW 90
Query: 140 NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIA 199
+ P+++LA E L + +VFFT GSEA ++ KL Y G+P K K I+
Sbjct: 91 SYAHPPAIELA-ERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVIS 149
Query: 200 RQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259
R +YHG+T A +++GLPA F+ P +++R G+ E + A+
Sbjct: 150 RAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADR 209
Query: 260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319
+E+ I EGP+T+AA EPV AGG PPP YFE+V+ + +YD+L ++DEVICAFGR
Sbjct: 210 IEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGR 269
Query: 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379
LG MFGC+++ PD+++ AK ++S Y P+GA++ S + E F HG+T+
Sbjct: 270 LGEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFLDGPTM---FLHGYTFG 326
Query: 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFA 439
GHPVS AVA+ L I++ +++ V P F+ ++ D PI+G++RG G G E
Sbjct: 327 GHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELV 386
Query: 440 DNKSPNEPFPPE------WGI--GAYFGAQCEKHGMLVRVS--GDN-IMMSPPFIMSPEE 488
+K+ E F + G A F A G+ R GD + ++PP I EE
Sbjct: 387 KDKATKETFTDDESERLLRGFLSPALFEA-----GLYCRADDRGDPVVQLAPPLISGQEE 441
Query: 489 VDELISKYGKALKATEERV 507
DE+ L R+
Sbjct: 442 FDEIEQILRSVLTEAWARL 460
>gnl|CDD|181707 PRK09221, PRK09221, beta alanine--pyruvate transaminase;
Provisional.
Length = 445
Score = 350 bits (900), Expect = e-116
Identities = 159/459 (34%), Positives = 241/459 (52%), Gaps = 19/459 (4%)
Query: 49 TDASSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAG 108
+ + N H M PFTA Q P ++ +EG Y D +G+K LD AG
Sbjct: 1 MPDMAAAARTDPNDLDAHWM--PFTANRQFKA-APRLLVSAEGMYYTDADGRKILDGTAG 57
Query: 109 LWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKP-SLDLAKELLEMFTASKMAKVFF 167
LWC G P +V A Q TL + +F + P + +LA+ L E+ + VFF
Sbjct: 58 LWCCNAGHGRPEIVEAVARQAATLDYAPAF--QMGHPLAFELAERLAEL-APGGLDHVFF 114
Query: 168 TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 227
TNSGSE+ DT +K+ Y+ A G+ + + I R++ YHG S+ G+ + F
Sbjct: 115 TNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGL 174
Query: 228 APFVLHTDCPHYWRYAHPGET--EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGG 285
P V H PH + + E+ LA++LE L+ TIAA I EP+ G+ G
Sbjct: 175 LPGVDHL--PHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAG 232
Query: 286 VIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSA 345
V+ PP Y ++++ + K+ IL I DEVI FGRLG F +++ + PD+++FAK L++
Sbjct: 233 VLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIITFAKGLTNG 292
Query: 346 YMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVN 405
+P+GA++ S E+ + F HG+TYS HPV+CA + L IY+E ++ E+
Sbjct: 293 AIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREEDLFERAA 352
Query: 406 KIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAY-FGAQCEK 464
++AP F+D V + P + +IR GL+ G E A P P G Y +C +
Sbjct: 353 ELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELA-------PRPGAPGARGYEAFMKCFE 405
Query: 465 HGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT 503
G+LVR +GD I +SPP I+ ++DEL+ G AL+A
Sbjct: 406 KGLLVRYTGDTIALSPPLIIEKAQIDELVDALGDALRAV 444
>gnl|CDD|171472 PRK12403, PRK12403, putative aminotransferase; Provisional.
Length = 460
Score = 341 bits (877), Expect = e-113
Identities = 168/431 (38%), Positives = 254/431 (58%), Gaps = 10/431 (2%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
P V+ + EG +++D +GK+YLD ++GLWCT LG L AAA Q+ LP+Y+ F++ T
Sbjct: 37 PRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFH-T 95
Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
T P++ ELL + +TNSGSEAN+ ++ V Y LG+P KK I R
Sbjct: 96 THPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWN 155
Query: 203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGE-TEEEYSTRLANNLE 261
YHGSTL A +L G+ +H+ L P V H D P YW YA+ GE T E+ R A LE
Sbjct: 156 GYHGSTLAATALGGMKFMHEMGGL-IPDVAHIDEP-YW-YANGGELTPAEFGRRAALQLE 212
Query: 262 DLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321
+ IL+ G E +A F+AEP GAGG+I PP +Y+ ++Q + ++YD+L ADEVI FGR G
Sbjct: 213 EKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTG 272
Query: 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 381
F + + +PD +S AK L+S Y+P+G +++S ++E + Q G F+HG TYSGH
Sbjct: 273 EWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQG---GVFAHGLTYSGH 329
Query: 382 PVSCAVAIEALKIYKERNIVEQV-NKIAPKFQDGVK-AFSDSPIIGEIRGTGLILGTEFA 439
PV+ AVAI LK ++ +V +V + P Q ++ F D P++GE++G GL+ +FA
Sbjct: 330 PVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFA 389
Query: 440 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKA 499
++K+ + F E + + G+++R + ++M+P + E+DEL+ K A
Sbjct: 390 EDKATRKRFANENDLAWRCRTIGFEEGVIIRSTLGRMIMAPALVAGRAEIDELVDKTRIA 449
Query: 500 LKATEERVKEL 510
+ T V L
Sbjct: 450 VDRTAREVGVL 460
>gnl|CDD|236027 PRK07483, PRK07483, hypothetical protein; Provisional.
Length = 443
Score = 337 bits (867), Expect = e-111
Identities = 157/432 (36%), Positives = 244/432 (56%), Gaps = 19/432 (4%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYH-SFWNR 141
V EG Y+ D GK+YLD+ G + LG S PR++AA AQ++ L + H SF+
Sbjct: 13 LPVAVAGEGIYLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFF-- 70
Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
TT+P+ LA L+ A + V+F + GSEA + +KL Y +G+P ++ FIAR+
Sbjct: 71 TTEPAEALADRLVAAAPAG-LEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARR 129
Query: 202 KSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY-WRYAHPGETEEEYSTRLANNL 260
+SYHG+TL A ++ G + F P H P Y +R GE++E Y RLA+ L
Sbjct: 130 QSYHGNTLGALAIGGNAWRREPF-APLLIEAHHVSPCYAYREQRAGESDEAYGQRLADEL 188
Query: 261 EDLILKEGPETIAAFIAEPVIGA-GGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319
E IL+ GP+T+AAF+AE V+GA G +PP YF++++ V +Y +L I DEV+C GR
Sbjct: 189 EAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGR 248
Query: 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379
GT+F C++ + PDLV+ AK L + Y PIGA+L S + + I S G F HG TY
Sbjct: 249 TGTLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIADGS---GFFQHGHTYL 305
Query: 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK-AFSDSPIIGEIRGTGLILGTEF 438
GH +CA A+ ++ E ++ V + + ++ P +G+IRG GL +G E
Sbjct: 306 GHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVEL 365
Query: 439 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR--------VSGDNIMMSPPFIMSPEEVD 490
+++ PF P + A + G++V V GD+++++PPFI++ ++D
Sbjct: 366 VADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQID 425
Query: 491 ELISKYGKALKA 502
E++ + G A+ A
Sbjct: 426 EIVERLGDAIDA 437
>gnl|CDD|223238 COG0160, GabT, 4-aminobutyrate aminotransferase and related
aminotransferases [Amino acid transport and metabolism].
Length = 447
Score = 328 bits (842), Expect = e-107
Identities = 143/432 (33%), Positives = 231/432 (53%), Gaps = 31/432 (7%)
Query: 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNR 141
PLVI ++EG+Y+YDV+G +YLD L+G+ LG + PR+V A QL L H+ R
Sbjct: 38 FPLVIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHT---R 94
Query: 142 --TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIA 199
+P ++LA++L + S + KVFF NSG+EA + +K+ Y GRP IA
Sbjct: 95 DLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYT---GRPG---VIA 148
Query: 200 RQKSYHGSTLIAASLSGLPALHQK-FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258
++HG TL A SL+G ++ F P V H P+ +R G EE
Sbjct: 149 FDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYR-CPFGIGGEECGDDALE 207
Query: 259 NLEDLI--LKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA 316
+E + L+ GPE +AA I EP+ G GG+I PP + + ++ + +++ IL IADEV
Sbjct: 208 YIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTG 267
Query: 317 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF 376
FGR G MF + + ++PD+V+ AK+L +P+ A++ E+ HG
Sbjct: 268 FGRTGKMFAFEHFGVEPDIVTLAKSL-GGGLPLSAVVGRAEI--------MDWPPGGHGG 318
Query: 377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILG 435
T+ G+PV+CA A+ L + +E N++E+ ++ +D ++ P+IG++RG GL++G
Sbjct: 319 TFGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIG 378
Query: 436 TEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFIMSPEEVDEL 492
E ++ EP + A A+ + G+L+ G + + + PP +S EE+DE
Sbjct: 379 VELVKDRDTKEPDA---ELAAKIVARAFERGLLLLTCGPHGNVLRILPPLTISDEELDEG 435
Query: 493 ISKYGKALKATE 504
+ +ALK
Sbjct: 436 LDILEEALKEAL 447
>gnl|CDD|180330 PRK05965, PRK05965, hypothetical protein; Provisional.
Length = 459
Score = 325 bits (836), Expect = e-106
Identities = 142/424 (33%), Positives = 236/424 (55%), Gaps = 3/424 (0%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
V+ ++G+ + D +G + LD+ AGLWC +G + +V AA Q+ LP+ +++
Sbjct: 29 VTVLASAKGATLTDASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFG 88
Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
++P++ LA +L E S + V+FT GS+A D+ V+ + +Y NA GRP+KK+FI+ ++
Sbjct: 89 SEPAIRLAAKLAERAPGS-LNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLER 147
Query: 203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 262
YHGS+ + A L+ LPA H+ FDLP P+ P+ +R + + + +A L
Sbjct: 148 GYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAA-LRA 206
Query: 263 LILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT 322
+ + G + +AAF EP+ G+GGVI PP + + ++ ++ ILF+ADEVI FGR G
Sbjct: 207 KVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGP 266
Query: 323 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 382
+F C+ + PDL++ AK L+S Y+P+GA+L+S V + I + HG+TYS HP
Sbjct: 267 LFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHP 326
Query: 383 VSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNK 442
VS AV +E L++Y E ++ K P+F G+ A P++G++RG GL+ E +K
Sbjct: 327 VSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVADK 386
Query: 443 SPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISKYGKALK 501
+ PF + +G++ R GD ++ +P + E D + + K L
Sbjct: 387 ATKTPFDAALDPADRIFDRAYANGLVFRAFGDGVLGFAPALCCTEGEFDLIFERTRKTLD 446
Query: 502 ATEE 505
Sbjct: 447 DVLA 450
>gnl|CDD|233000 TIGR00508, bioA, adenosylmethionine-8-amino-7-oxononanoate
transaminase. All members of the seed alignment have
been demonstrated experimentally to act as EC 2.6.1.62,
an enzyme in the biotin biosynthetic pathway. Alternate
names include 7,8-diaminopelargonic acid
aminotransferase, DAPA aminotransferase, and
adenosylmethionine-8-amino-7-oxononanoate
aminotransferase. The gene symbol is bioA in E. coli and
BIO3 in S. cerevisiae [Biosynthesis of cofactors,
prosthetic groups, and carriers, Biotin].
Length = 417
Score = 324 bits (833), Expect = e-106
Identities = 141/425 (33%), Positives = 230/425 (54%), Gaps = 23/425 (5%)
Query: 71 PFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 130
P+T + PL IE++EG Y+YD +G++Y+D ++ W G + P + AA QL+
Sbjct: 4 PYTQ--MKDALPPLPIERAEGVYLYDEDGREYIDGISSWWVNIHGHNHPEINAAIKEQLD 61
Query: 131 TLPFYHS-FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNAL 189
L H F T +P+++LA+ L+E+ T + KVFF++SGS A + +K+ Y
Sbjct: 62 KLE--HVMFGGLTHEPAIELAERLVEI-TPEGLEKVFFSDSGSVAVEVALKMALQYWQNQ 118
Query: 190 GRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPF-VLHTDCPHYWRYAHPGET 248
GRP K +F+A + YHG T A S+ + H F+ P F V+ P +R P +
Sbjct: 119 GRPGKTRFLAFRNGYHGDTFGAMSVGDVGGFHALFE-PLLFEVVFIPAPPCYRCWDPDDC 177
Query: 249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKVQAVVKKYDIL 307
E E LE L+ + E IAAFI EP++ GAGG+ P Y K++ + +Y +L
Sbjct: 178 EAEC----LAALEALLEEHADE-IAAFIVEPLVQGAGGMRFYPPEYLRKLRELCDEYGVL 232
Query: 308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSN 367
IADE+ FGR G +F C+ + PD++ +K L+ Y+P+ A L + E+ E +
Sbjct: 233 LIADEIATGFGRTGKLFACEHAGVTPDILCLSKGLTGGYLPLAATLTTDEIYEAF-YSDD 291
Query: 368 TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI 427
+F HG TY+G+P++CA A+ +L + +E + +EQV +I + + G+ D P + ++
Sbjct: 292 EGKAFMHGHTYTGNPLACAAALASLDLLEEEDWLEQVARIEAQLRAGLAPLRDHPGVADV 351
Query: 428 RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPE 487
R G I E EP+ GA + G+L+R G+ I + PP+I++ E
Sbjct: 352 RVLGAIGAVEL---VRDVEPYI-----GAKIQQFFLERGVLLRPLGNVIYLMPPYIITDE 403
Query: 488 EVDEL 492
E+++L
Sbjct: 404 ELEKL 408
>gnl|CDD|201078 pfam00202, Aminotran_3, Aminotransferase class-III.
Length = 338
Score = 311 bits (799), Expect = e-103
Identities = 128/356 (35%), Positives = 194/356 (54%), Gaps = 18/356 (5%)
Query: 85 VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTK 144
I K++G ++YDV+G++YLD L+G+ LG P++V A Q + L + SF TT+
Sbjct: 1 FITKAKGVWLYDVDGRRYLDFLSGIAVVNLGHCHPKIVQAVKEQADKL-THTSFRAFTTE 59
Query: 145 PSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSY 204
P+L LA++L + T + +VFF NSGSEAN+T +KL Y G K K IA +
Sbjct: 60 PALQLAEKLAQ-LTPGGLDRVFFMNSGSEANETAIKLARQYAKKKGATGKTKIIAFSGGF 118
Query: 205 HGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLI 264
HG TL A S++G + F P V P Y EEE A+ LI
Sbjct: 119 HGRTLGALSVTGSSGYKKGFGPSLPGVYF--LP----YPDLEAAEEE--LACADEALRLI 170
Query: 265 LKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF 324
+ IAA I EP+ G GGV+PPP + ++ + KK+ +L IADEV FGR G +F
Sbjct: 171 KAVHDDNIAAVIVEPIQGEGGVVPPPPGFLAGLREICKKHGVLLIADEVQTGFGRTGKLF 230
Query: 325 GCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVS 384
C+ Y + PD+++ AKAL+ P+ A+L + E+ + H SHG T+ G+P++
Sbjct: 231 ACEHYGVTPDIMTLAKALTGGL-PLSAVLATAEIMQAFHPG-------SHGGTFGGNPLA 282
Query: 385 CAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFAD 440
CA A+ L I ++ N+++ + + G+ A D P+IG++RG GL++ E
Sbjct: 283 CAAALAVLDIIEDENLLQNAQEKGDYLRKGLLALQDKPVIGDVRGKGLMIAIEIVK 338
>gnl|CDD|181078 PRK07678, PRK07678, aminotransferase; Validated.
Length = 451
Score = 315 bits (808), Expect = e-102
Identities = 144/428 (33%), Positives = 247/428 (57%), Gaps = 16/428 (3%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
+V+ K+EG++V D+ G +YLD ++GLWC +G L AA QL TL ++ ++
Sbjct: 30 TMVVAKAEGAWVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFP--LTQS 87
Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
+P++ LA++L E + +FF+NSGSEAN+T K+ Y+ G P++ KFI+R +
Sbjct: 88 HEPAIKLAEKLNEWLGGEYV--IFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYR 145
Query: 203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 262
+YHG+++ A + +G K++ AP LH P +R E+E+ Y ++
Sbjct: 146 AYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYR-MPGIESEDIYDLECVKEIDR 204
Query: 263 LILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT 322
++ E ETIAA I EP+I GGV+ PP Y + V+ + +K+ L I+DEVIC FGR G
Sbjct: 205 VMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGK 264
Query: 323 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 382
FG Y +KPD+++ AK ++SAY+P+ A V E+ E + F H T+ G+P
Sbjct: 265 AFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEY-EHFRHVNTFGGNP 323
Query: 383 VSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADN 441
+CA+A++ L+I + N++E+ ++ + +K + P++G+IRG GL++G E ++
Sbjct: 324 AACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVND 383
Query: 442 KSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGD------NIM-MSPPFIMSPEEVDELIS 494
K EP + + + A C++ G+++ +GD N++ +SPP ++S EE+ ++
Sbjct: 384 KETKEPADND-KVASVVAA-CKEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVG 441
Query: 495 KYGKALKA 502
AL+
Sbjct: 442 TLKTALER 449
>gnl|CDD|183999 PRK13360, PRK13360, omega amino acid--pyruvate transaminase;
Provisional.
Length = 442
Score = 309 bits (794), Expect = e-100
Identities = 151/455 (33%), Positives = 235/455 (51%), Gaps = 17/455 (3%)
Query: 53 SQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCT 112
++ T N M PFTA Q P ++ ++G Y +G++ LD AGLWC
Sbjct: 2 TENVSQTPNDLSAFWM--PFTANRQFKK-APRLLVAAKGMYYTTHDGRRVLDGTAGLWCV 58
Query: 113 ALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGS 172
G P +V A AQ L + +F K +LA + E+ + VFFTNSGS
Sbjct: 59 NAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKA-FELANRIAEIAPGG-LNHVFFTNSGS 116
Query: 173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVL 232
E+ DT +K+ Y+ A G ++ + I R++ YHG S+ G+ + F P V
Sbjct: 117 ESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVD 176
Query: 233 HTDCPHYWRYAHPGET--EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPP 290
H PH A + + E+ LA+ LE L+ TIAA I EPV G+ GV+ PP
Sbjct: 177 HL--PHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPP 234
Query: 291 ATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIG 350
Y ++++ + K+ IL I DEVI FGRLG F + + PDL++ AK L++ +P+G
Sbjct: 235 KGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTCAKGLTNGAIPMG 294
Query: 351 AILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPK 410
A+ VS E+ + F HG+TYSGHP++CA A+ L +Y+ ++ + ++AP
Sbjct: 295 AVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGLLTRAARLAPY 354
Query: 411 FQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAY-FGAQCEKHGMLV 469
++D + + D+P + +IR GL+ E A P + G AY +C + G+++
Sbjct: 355 WEDALHSLRDAPHVIDIRNLGLVGAVELA-------PRDGKPGKRAYEVFLKCFEKGLMI 407
Query: 470 RVSGDNIMMSPPFIMSPEEVDELISKYGKALKATE 504
R +GD + +SPP I+ ++DEL +ALK T
Sbjct: 408 RYTGDILALSPPLIIEEAQIDELFDILAQALKETI 442
>gnl|CDD|235884 PRK06917, PRK06917, hypothetical protein; Provisional.
Length = 447
Score = 307 bits (788), Expect = 1e-99
Identities = 144/438 (32%), Positives = 227/438 (51%), Gaps = 28/438 (6%)
Query: 85 VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHSFWNRTT 143
VI +G Y+YD NG KY D +G +G + A Q + F Y S + T+
Sbjct: 16 VISHGKGVYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQF--TS 73
Query: 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKS 203
+P+ LAK+L ++ + FF NSGSEAN+T +K+ + G K K ++R S
Sbjct: 74 EPAEKLAKKLSDLSPGD-LNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMS 132
Query: 204 YHGSTLIAASLSGLPALHQKF-----DLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258
YHG T+ A S+SG P Q+F D P P+ +R + A
Sbjct: 133 YHGITMGALSMSGHPLRRQRFVSLLEDYPT-----ISAPYCYRCPV-QKVYPTCQLACAT 186
Query: 259 NLEDLILKEGPETIAAFIAEPVIGA-GGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 317
LE I + G E IAAFIAEP+IGA G + PP Y++ ++ + YDILFIADEV+
Sbjct: 187 ELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGL 246
Query: 318 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 377
GR G MF + + ++PD+++ K L + Y PI A +VS V E I S ++ S G T
Sbjct: 247 GRTGAMFAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMS---GHT 303
Query: 378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK-AFSDSPIIGEIRGTGLILGT 436
S +P+S A A+ L+ ++ N+ E+ + G++ S IIG++RG GL++G
Sbjct: 304 LSANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGV 363
Query: 437 EFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV--------RVSGDNIMMSPPFIMSPEE 488
EF +K +PF + + + K+G+L+ GD ++++PP ++ E
Sbjct: 364 EFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTITYSE 423
Query: 489 VDELISKYGKALKATEER 506
+DEL+S + K+++ ++
Sbjct: 424 LDELLSIFAKSVEEMMQK 441
>gnl|CDD|227325 COG4992, ArgD, Ornithine/acetylornithine aminotransferase [Amino
acid transport and metabolism].
Length = 404
Score = 298 bits (765), Expect = 1e-96
Identities = 133/427 (31%), Positives = 208/427 (48%), Gaps = 58/427 (13%)
Query: 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS---F 138
P+VI + EG+YV+D G++YLD AG+ LG P LV A Q L +H F
Sbjct: 24 LPVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKL--WHVSNLF 81
Query: 139 WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 198
+N P +LA++L+E+ +VFF NSG+EAN+ +KL Y G P K K I
Sbjct: 82 YNE---PQAELAEKLVELS--PFADRVFFCNSGAEANEAALKLARKYT---GDPEKSKII 133
Query: 199 ARQKSYHGSTLIAASLSGLPALHQKF-DLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257
A + S+HG TL A S +G P + F L F + +
Sbjct: 134 AFENSFHGRTLGALSATGQPKYRKGFGPLLPGF-------RHVPF--------------- 171
Query: 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 317
N++E L E AA I EP+ G GGVIP P + + ++ + ++ L I DEV
Sbjct: 172 NDIEAL-EAAIDEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGL 230
Query: 318 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 377
GR G +F + Y ++PD+++ AKAL + PIGA+L + E++ HG T
Sbjct: 231 GRTGKLFAYEHYGVEPDILTLAKALGGGF-PIGAMLATEEIASAFT-------PGDHGST 282
Query: 378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-SPIIGEIRGTGLILGT 436
+ G+P++CAVA+ L++ E ++E V + ++ P++ E+RG GL++G
Sbjct: 283 FGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGI 342
Query: 437 EFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISK 495
E + + G+LV +G N++ PP +++ EE+DE +
Sbjct: 343 ELKEPY-----------RARDIVRALREEGVLVLPAGPNVIRFLPPLVITEEEIDEALDA 391
Query: 496 YGKALKA 502
+AL A
Sbjct: 392 LERALAA 398
>gnl|CDD|180746 PRK06916, PRK06916, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 460
Score = 293 bits (751), Expect = 5e-94
Identities = 143/440 (32%), Positives = 234/440 (53%), Gaps = 11/440 (2%)
Query: 71 PFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 130
PFT + PL+IE+ EG +YDVNG +Y D ++ +W G P L A QLN
Sbjct: 27 PFTQMKDYLEEDPLIIERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLN 86
Query: 131 TLPFYHS-FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNAL 189
+ HS PS+ LA++L+E+ + KVF+++SG+ A + +K+ + Y
Sbjct: 87 KIA--HSTLLGLANVPSILLAEKLIEV-VPEGLKKVFYSDSGATAVEIAIKMAFQYWQNK 143
Query: 190 GRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHT-DCPHYWRYAHP-GE 247
G+P K++F+ + +YHG T+ A S+ + HQ + + + P+ + Y P G
Sbjct: 144 GKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVY---SSLLFEAIKMPYPYTYRSPYGN 200
Query: 248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKVQAVVKKYDI 306
+ E + LE+L LKE E IAA I EP++ GAGG+I P Y + ++ + KY++
Sbjct: 201 DKAEIVKKHLEELEEL-LKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNV 259
Query: 307 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQS 366
LFI DEV FGR G MF C+ ++ PD+++ K L+ Y+PI + + E+ +
Sbjct: 260 LFITDEVATGFGRTGKMFACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGDY 319
Query: 367 NTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGE 426
+F HG +Y+G+P+ CAVA+ L++Y++ N++EQV + ++ +G+
Sbjct: 320 EEQKTFFHGHSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFALKHVGD 379
Query: 427 IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSP 486
IR GL++G E NK EPF +G + + GML R G+ I+ PP +
Sbjct: 380 IRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPLGNTIVFMPPLASTI 439
Query: 487 EEVDELISKYGKALKATEER 506
+E+DE++ KA+ E
Sbjct: 440 DELDEMLRILYKAISDVTEG 459
>gnl|CDD|235687 PRK06062, PRK06062, hypothetical protein; Provisional.
Length = 451
Score = 292 bits (749), Expect = 1e-93
Identities = 141/439 (32%), Positives = 224/439 (51%), Gaps = 32/439 (7%)
Query: 81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWN 140
++P+VI +EGSYV+D G++YLD + L T +G P++VAA Q L
Sbjct: 34 INPMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLC------- 86
Query: 141 RTTKPSL------DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK 194
T P+ + A+ + E ++KVFFTN G++AN+ V++ + GRP
Sbjct: 87 -TVAPAHANDARSEAARLIAER-APGDLSKVFFTNGGADANEHAVRMARLHT---GRP-- 139
Query: 195 KKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254
K ++ +SYHG T A +L+G P D V+H P +R TEEE
Sbjct: 140 -KVLSAYRSYHGGTGSAINLTGDPRRWPN-DTGRAGVVHFFGPFLYRSEFHATTEEEECE 197
Query: 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVI 314
R +LE +I EGP TIAA + E V G G++ PP Y V+ + ++ I+ IADEV+
Sbjct: 198 RALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVM 257
Query: 315 CAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSH 374
FGR G F + + + PDL++FAK ++S Y+P+G + +S ++ + +
Sbjct: 258 AGFGRTGKWFAIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATFADR-----PYPG 312
Query: 375 GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKI-APKFQDGVKAFSD-SPIIGEIRGTGL 432
G TYSGHP++CA A+ + +E IVE +I A G++ ++ P +GE+RG G+
Sbjct: 313 GLTYSGHPLACAAAVATINAMEEEGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGV 372
Query: 433 ILGTEFADNKSPNEPFPPEWGIGAY---FGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEV 489
E ++ EP P A A C++ G+L V+G+ I + PP ++ +EV
Sbjct: 373 FWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFVNGNRIHVVPPCTVTEDEV 432
Query: 490 DELISKYGKALKATEERVK 508
E ++ AL +
Sbjct: 433 REGLAILDAALAVADAATA 451
>gnl|CDD|235056 PRK02627, PRK02627, acetylornithine aminotransferase; Provisional.
Length = 396
Score = 289 bits (742), Expect = 2e-93
Identities = 130/425 (30%), Positives = 209/425 (49%), Gaps = 57/425 (13%)
Query: 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS---F 138
P+ + EG+ ++D +GK+YLD LAG+ LG P+LV A Q L H+ +
Sbjct: 21 LPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKL--IHTSNLY 78
Query: 139 WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 198
+ +P +LA++L+E+ S M KVFF NSG+EAN+ +KL Y + G K + I
Sbjct: 79 YI---EPQEELAEKLVEL---SGMDKVFFCNSGAEANEAAIKLARKYGHKKGI-EKPEII 131
Query: 199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258
+ S+HG TL S +G P + F+ P V G + N
Sbjct: 132 TAENSFHGRTLATLSATGQPKYQEGFE---PLV-------------EGFIYVPF-----N 170
Query: 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 318
++E L +T A + EP+ G GGV P Y + ++ + + IL I DEV G
Sbjct: 171 DIEALKAAITDKTAAVML-EPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMG 229
Query: 319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY 378
R G +F Y I+PD+++ AK L +PIGA+L +V++V HG T+
Sbjct: 230 RTGKLFAYQHYGIEPDIMTLAKGLGGG-VPIGAVLAKEKVADV-------FTPGDHGSTF 281
Query: 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTE 437
G+P++CA A+ ++I +E ++E ++ + ++ P I E+RG GL++G E
Sbjct: 282 GGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIE 341
Query: 438 FADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDELISKY 496
A + + G+L+ V+GDN + + PP I+S EE+DE + +
Sbjct: 342 LDRP-------------AAEIVKKALEKGLLINVTGDNVLRLLPPLIISKEEIDEAVDRL 388
Query: 497 GKALK 501
+ LK
Sbjct: 389 EEVLK 393
>gnl|CDD|235599 PRK05769, PRK05769, 4-aminobutyrate aminotransferase; Provisional.
Length = 441
Score = 262 bits (671), Expect = 3e-82
Identities = 140/446 (31%), Positives = 231/446 (51%), Gaps = 36/446 (8%)
Query: 64 KGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVA 123
+ LA T W PLVIE+ EG +V DV+G YLD AG+ T +G + P++V
Sbjct: 23 RDEKYLAQSTRRWY-----PLVIERGEGVWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVK 77
Query: 124 AATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVW 183
A Q ++S + +P+++LA+ L+E+ KVFFTNSG+E+N+ +K+
Sbjct: 78 AVKEQAEKF-LHYSLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIAR 136
Query: 184 YYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP-APFVLHTDCPHYWRY 242
Y+ GR IA ++HG T + SL+ + +K P P V+H P+ +R
Sbjct: 137 YHT---GRK---YIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRN 190
Query: 243 AHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV 300
E EE + + +ED + K+ PE +AA I EP+ G GG + PP +F++++ +
Sbjct: 191 PWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKL 250
Query: 301 VKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSE 360
KY IL I DEV GR G MF + + ++PD+++ AKA++ +P+GA++ E+
Sbjct: 251 ADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIITLAKAIAGG-LPLGAVIGRAEL-- 307
Query: 361 VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD 420
L SH T+ G+PV+ A A+ L+ +E ++E K+ + +K +
Sbjct: 308 ------MFLPPGSHANTFGGNPVAAAAALATLEELEE-GLLENAQKLGEYLRKELKELKE 360
Query: 421 S-PIIGEIRGTGLILGTEFADNKSPNEPFPPE--WGIGAYFGAQCEKHGMLVRVSGDN-I 476
IG++RG GL++G E ++ EP P + F K G+L+ +G + I
Sbjct: 361 KYEFIGDVRGLGLMIGVELVKDR--KEPDPKLRDKVLYEAF-----KRGLLLLGAGKSAI 413
Query: 477 MMSPPFIMSPEEVDELISKYGKALKA 502
+ PP I++ EE D + +A+K
Sbjct: 414 RIIPPLIITEEEADIGLEILEEAIKE 439
>gnl|CDD|233098 TIGR00707, argD, transaminase, acetylornithine/succinylornithine
family. This family of proteins, for which ornithine
aminotransferases form an outgroup, consists mostly of
proteins designated acetylornithine aminotransferase.
However, the two very closely related members from E.
coli are assigned different enzymatic activities. One is
acetylornithine aminotransferase (EC 2.6.1.11), ArgD, an
enzyme of arginine biosynthesis, while another is
succinylornithine aminotransferase, an enzyme of the
arginine succinyltransferase pathway, an
ammonia-generating pathway of arginine catabolism (See
MEDLINE:98361920). Members of this family may also act
on ornithine, like ornithine aminotransferase (EC
2.6.1.13) (see MEDLINE:90337349) and on
succinyldiaminopimelate, like
N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17,
DapC, an enzyme of lysine biosynthesis) (see
MEDLINE:99175097).
Length = 379
Score = 255 bits (654), Expect = 1e-80
Identities = 139/420 (33%), Positives = 209/420 (49%), Gaps = 52/420 (12%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
P+ I + +G+YVYDVNGK+YLD +AG+ +LG + P+LV A QL L H
Sbjct: 10 PVKIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKL--VHVSNLYY 67
Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
T+P +LA++L+E S +VFF NSG+EAN+ +KL Y G KKK IA +
Sbjct: 68 TEPQEELAEKLVE---HSGADRVFFCNSGAEANEAALKLARKYTGDKG-KEKKKIIAFEN 123
Query: 203 SYHGSTLIAASLSGLPALHQKFD-LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLE 261
S+HG T+ A S +G P + F+ L F Y Y +L+
Sbjct: 124 SFHGRTMGALSATGQPKYQKGFEPLVPGF-------SYAPYNDI------------ESLK 164
Query: 262 DLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321
I E AA I EP+ G GGV P A + + ++ + K D L I DEV GR G
Sbjct: 165 KAIDDE----TAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTG 220
Query: 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 381
F + Y I+PD+++ AK L PIGA L EV+E T G HG T+ G+
Sbjct: 221 KFFAYEHYGIEPDIITLAKGLGGGV-PIGATLAKEEVAEAF-----TPG--DHGSTFGGN 272
Query: 382 PVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADN 441
P++CA A+ L++ ++ ++E V + F++ ++ + E+RG GL+LG E
Sbjct: 273 PLACAAALAVLEVIEKERLLENVKEKGDYFKERLEELGKNYPNKEVRGKGLMLGIELEAP 332
Query: 442 KSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISKYGKAL 500
+ + G+LV +G ++ PP I++ EE+DE +S +A+
Sbjct: 333 -------------CKDIVKKALEKGLLVNCAGPKVLRFLPPLIITKEEIDEAVSALEEAI 379
>gnl|CDD|240281 PTZ00125, PTZ00125, ornithine aminotransferase-like protein;
Provisional.
Length = 400
Score = 248 bits (636), Expect = 1e-77
Identities = 138/436 (31%), Positives = 213/436 (48%), Gaps = 52/436 (11%)
Query: 80 DVHPL--VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-H 136
+ HPL V+++ +G +V+DV GKKY D L+ G P+++AA Q L
Sbjct: 9 NYHPLPVVLKRGKGVFVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSR 68
Query: 137 SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV--WYYNNALGRPNK 194
+F+N + K + ++F KV NSG+EA +T +K W Y N+
Sbjct: 69 AFYNDVLGLA---EKYITDLF---GYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQ 122
Query: 195 KKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254
K I ++ G T+ A S S P + F PFV PG +Y
Sbjct: 123 AKIIFCNGNFSGRTIGACSASTDPKCYNNF---GPFV-------------PGFELVDY-- 164
Query: 255 RLANNLEDL-ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV 313
N++E L L + P +AAFI EP+ G GVI P Y ++V + KKY++L I DE+
Sbjct: 165 ---NDVEALEKLLQDPN-VAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEI 220
Query: 314 ICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS 373
GR G + D +KPD+V KALS PI A+L + +V VI
Sbjct: 221 QTGLGRTGKLLAHDHEGVKPDIVLLGKALSGGLYPISAVLANDDVMLVIKPG-------E 273
Query: 374 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA-FSDSPIIGEIRGTGL 432
HG TY G+P++CAVA+EAL++ KE + E ++ F+DG+K SP + EIRG GL
Sbjct: 274 HGSTYGGNPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKELLKKSPWVKEIRGKGL 333
Query: 433 ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDE 491
+ F + N W + +++G+L + + DNI+ +PP +++ E++D+
Sbjct: 334 LNAIVFDHSDGVN-----AWDLCLKL----KENGLLAKPTHDNIIRFAPPLVITKEQLDQ 384
Query: 492 LISKYGKALKATEERV 507
+ K LK+ +
Sbjct: 385 ALEIIKKVLKSFDSNK 400
>gnl|CDD|180800 PRK07030, PRK07030, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 466
Score = 249 bits (637), Expect = 5e-77
Identities = 134/430 (31%), Positives = 230/430 (53%), Gaps = 42/430 (9%)
Query: 83 PLV-IEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP------FY 135
PL+ I + EG ++ D GK+YLD+++ W G + PR+ Q++ L F
Sbjct: 29 PLIPIRRGEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFS 88
Query: 136 HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 195
H +P ++L++ L+++ T +++ F+ ++GS A + +K+ ++Y G+P KK
Sbjct: 89 H-------EPVIELSERLVKI-TPPGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKK 140
Query: 196 KFIARQKSYHGSTLIAASLSGL--------PALHQKFDLPAPFVLHTDCPHYWRYAHPGE 247
+F+ SYHG TL A S+ + P L +P+P DC Y R G
Sbjct: 141 RFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSP-----DC--YLR--PEGM 191
Query: 248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKVQAVVKKYDI 306
+ EE+S R+ ++E L E + IAA I EP+I GAGG+ Y + ++ +Y +
Sbjct: 192 SWEEHSRRMFAHMEQ-TLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGV 250
Query: 307 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQS 366
I DE+ FGR GTMF C++ I+PD + +KAL+ Y+P+ A+L + V + +
Sbjct: 251 HLIHDEIAVGFGRTGTMFACEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDY 310
Query: 367 NTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGE 426
TL +F H +Y+G+P++CA A+ L I+++ N++E +A + + +D P + E
Sbjct: 311 PTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIENNRALARRMAEATAHLADHPHVAE 370
Query: 427 IRGTGLILGTEFADNKSPNEPFPPEW----GIGAYFGAQCEKHGMLVRVSGDNIMMSPPF 482
+R TG+IL E +K+ P+P W G+ Y A + G L+R G + PP+
Sbjct: 371 VRQTGMILAIEMVQDKASKTPYP--WQERRGLKVYQHAL--ERGALLRPLGSVVYFLPPY 426
Query: 483 IMSPEEVDEL 492
+++PE++D L
Sbjct: 427 VITPEQIDFL 436
>gnl|CDD|235656 PRK05964, PRK05964, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 423
Score = 241 bits (618), Expect = 1e-74
Identities = 115/429 (26%), Positives = 211/429 (49%), Gaps = 40/429 (9%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP------FYH 136
P+ I ++EG+Y+Y +G++ +D+++ W G + P + A QL+ L F H
Sbjct: 25 PIPIVRAEGAYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFTH 84
Query: 137 SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 196
+P+ LA+ L+ + T + VFF++SGS A + +K+ Y G P + +
Sbjct: 85 -------EPAERLAQRLVAL-TPGGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSR 136
Query: 197 FIARQKSYHGSTLIAASLSGLPALHQKFD--LPAPFVLHTDCPHYWRYAHPGETEEEYST 254
F++ + YHG T+ S+ +H + L + P P E+
Sbjct: 137 FLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFE--QVTAPFP-------PDGYEQATLD 187
Query: 255 RLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKVQAVVKKYDILFIADEV 313
L E L+ K E IAAFI EP++ GAGG++ Y +++ + ++ +L I DE+
Sbjct: 188 AL----EALLEKHAGE-IAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEI 242
Query: 314 ICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS 373
FGR GT+F C++ + PD++ +K L+ Y+P+ A L + E+ E +S +F
Sbjct: 243 ATGFGRTGTLFACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRA-KAFM 301
Query: 374 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI 433
H +Y+ +P++CA A +L ++++ ++E+V ++ +G++ F D P + ++R G I
Sbjct: 302 HSPSYTANPLACAAANASLDLFEDEPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAI 361
Query: 434 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELI 493
E P G A + G+L+R G+ I + PP+I++ EE+D +
Sbjct: 362 GAVELDR--------PVLERDGPALRAFALERGVLLRPLGNTIYLMPPYIITAEELDRIT 413
Query: 494 SKYGKALKA 502
+
Sbjct: 414 DAIVEVADE 422
>gnl|CDD|181234 PRK08117, PRK08117, 4-aminobutyrate aminotransferase; Provisional.
Length = 433
Score = 236 bits (605), Expect = 1e-72
Identities = 139/447 (31%), Positives = 221/447 (49%), Gaps = 59/447 (13%)
Query: 82 HP-LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWN 140
HP L + K EG Y Y V+GK+YLD +G+ +G P++V A Q + L H
Sbjct: 24 HPNLPVVKGEGCYYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKL--MHGPSG 81
Query: 141 RTTKPS-LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIA 199
S L LA+EL E+ T + FF+NSG+EA + +KL + RP I+
Sbjct: 82 VIYYESILKLAEELAEI-TPGGLDCFFFSNSGAEAIEGALKLAKHVT---KRPY---IIS 134
Query: 200 RQKSYHGSTLIAASLSGLPALHQKFDLP-------APFVLHTDCPHYWRYAHPGETEEEY 252
+HG TL A S++ + ++K+ P AP+ CP GE E
Sbjct: 135 FTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPK-------GEDPEVC 187
Query: 253 STRLANNLEDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIAD 311
+LE L + PE +AA I EPV+G GG I PP ++ +K++ + ++ IL I D
Sbjct: 188 FLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFD 247
Query: 312 EVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS 371
EV FGR G F + + PD+++ AK ++S +P+ A++ S E+ E LG
Sbjct: 248 EVQTGFGRTGEWFAAQTFGVVPDIMTIAKGIASG-LPLSAVVASKELMEQWP-----LG- 300
Query: 372 FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGT 430
SHG T+ G+PV+CA A+ L++ KE +++ N++ + ++ + P+IG++RG
Sbjct: 301 -SHGTTFGGNPVACAAALATLEVIKEEKLLDNANEMGAYALERLEVLKEKHPVIGDVRGI 359
Query: 431 GLILGTEFAD-NKSPNEPFPPEWGIGAYFGAQCEK-------HGMLVR---VSGDNIMMS 479
GL++G E D + P+ G EK G+L +G+ + M
Sbjct: 360 GLMIGIEIVDPDGEPD-------------GDAVEKILDKCLEKGLLFYLCGNAGNVLRMI 406
Query: 480 PPFIMSPEEVDELISKYGKALKATEER 506
PP ++ EE+DE + +AL E +
Sbjct: 407 PPLTVTKEEIDEGLDILDEALTEYEAK 433
>gnl|CDD|130940 TIGR01885, Orn_aminotrans, ornithine aminotransferase. This model
describes the final step in the biosynthesis of
ornithine from glutamate via the non-acetylated pathway.
Ornithine amino transferase takes L-glutamate
5-semialdehyde and makes it into ornithine, which is
used in the urea cycle, as well as in the biosynthesis
of arginine. This model includes low-GC bacteria and
eukaryotic species. The genes from two species are
annotated as putative acetylornithine aminotransferases
- one from Porphyromonas gingivalis (OMNI|PG1271), and
the other from Staphylococcus aureus (OMNI|SA0170).
After homology searching using BLAST it was determined
that these two sequences were most closely related to
ornithine aminotransferases. This model's seed includes
one characterized hit, from Bacillus subtilis
(SP|P38021).
Length = 401
Score = 225 bits (575), Expect = 1e-68
Identities = 136/432 (31%), Positives = 211/432 (48%), Gaps = 59/432 (13%)
Query: 82 HPL--VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHSF 138
HPL V K+EG +V+DV GK+YLD L+ G P++V A T Q L +F
Sbjct: 17 HPLPVVFSKAEGVHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAF 76
Query: 139 WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV--WYYNNALGRP-NKK 195
+N A+ + ++F K V N+G+EA +T +KL W Y G P N+
Sbjct: 77 YNDVFGE---FAEYVTKLFGYDK---VLPMNTGAEAVETAIKLARKWGYK-VKGIPENQA 129
Query: 196 KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255
++ + ++HG TL A S+S P F P+V PG + Y
Sbjct: 130 IIVSAKGNFHGRTLGAISMSTDPDSRTNF---GPYV-------------PGFKKIPY--- 170
Query: 256 LANNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV 313
NNLE L L++ + AFI EP+ G GV+ P Y +KV+ + K+++L IADE+
Sbjct: 171 --NNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEI 228
Query: 314 ICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS 373
GR G + D ++KPD+V KALS P+ A+L +V I
Sbjct: 229 QTGLGRTGKLLCVDHENVKPDIVLLGKALSGGVYPVSAVLADDDVMLTIKPG-------E 281
Query: 374 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI 433
HG TY G+P++CAVA+ AL++ +E + E K+ F+D +K PII E+RG GL+
Sbjct: 282 HGSTYGGNPLACAVAVAALEVLEEEKLAENAEKLGEIFRDQLKKLP-KPIITEVRGRGLL 340
Query: 434 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEK---HGMLVRVSGDNIM-MSPPFIMSPEEV 489
++K+ W + C K G+L + + NI+ ++PP +++ E++
Sbjct: 341 NAIVIDESKTGRTA----WDL-------CLKLKEKGLLAKPTHGNIIRLAPPLVITEEQL 389
Query: 490 DELISKYGKALK 501
DE + K +
Sbjct: 390 DEGLEIIKKVID 401
>gnl|CDD|235112 PRK03244, argD, acetylornithine aminotransferase; Provisional.
Length = 398
Score = 222 bits (569), Expect = 9e-68
Identities = 128/424 (30%), Positives = 195/424 (45%), Gaps = 53/424 (12%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
PL + + EG+ V+DV+GK+YLD L G+ ALG + P +V A T QL TL + +
Sbjct: 26 PLALVRGEGAVVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLF--A 83
Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
T+P + LA+ L+E+ A + +VFF NSG+EAN+ KL GR K +A +
Sbjct: 84 TEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLA----RLTGRT---KIVAAEG 136
Query: 203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 262
+HG T+ A +L+G PA F P G Y A L
Sbjct: 137 GFHGRTMGALALTGQPAKRAPF---EPLP-------------GGVEHVPYGDVDA--LAA 178
Query: 263 LILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT 322
+ + AA EP+ G GV+PPPA Y + + ++ L + DEV GR G
Sbjct: 179 AV----DDDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGA 234
Query: 323 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 382
F + PD+V+ AK L +PIGA L +++ L HG T+ G+P
Sbjct: 235 WFAHQHDGVTPDVVTLAKGLGGG-LPIGACLAFGPAADL-------LTPGLHGSTFGGNP 286
Query: 383 VSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNK 442
V+CA A+ L ++E ++ + + G++A P++ +RG GL+LG
Sbjct: 287 VACAAALAVLDTIASEGLLENAERLGEQLRAGIEAL-GHPLVDHVRGRGLLLGIVL---- 341
Query: 443 SPNEPFPPEWGIGAYFGAQCEKHGMLVR-VSGDNIMMSPPFIMSPEEVDELISKYGKALK 501
P A + G LV V+ D I ++PP I++ +VD ++ L
Sbjct: 342 --TAPVAKA------VEAAAREAGFLVNAVAPDVIRLAPPLIITDAQVDAFVAALPAILD 393
Query: 502 ATEE 505
A
Sbjct: 394 AAAA 397
>gnl|CDD|179270 PRK01278, argD, acetylornithine transaminase protein; Provisional.
Length = 389
Score = 213 bits (546), Expect = 2e-64
Identities = 115/427 (26%), Positives = 194/427 (45%), Gaps = 59/427 (13%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFW--- 139
L E+ EG ++ D +G++YLD +G+ +LG + P LV A Q L W
Sbjct: 14 DLAFERGEGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKL------WHVS 67
Query: 140 NRTTKPSLDLAKELLEMFTASKMA-KVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 198
N P + L E + A KVFFTNSG+EA + +K Y+ G P + + I
Sbjct: 68 NLYRIPE---QERLAERLVENSFADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRII 124
Query: 199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258
+ ++HG TL + G + F P V PG + +
Sbjct: 125 TFEGAFHGRTLATIAAGGQEKYLEGF---GPLV-------------PGFDQVPF-----G 163
Query: 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 318
++E L P T AA + EP+ G GG+ P P + + ++ + + +L I DEV C G
Sbjct: 164 DIEALKAAITPNT-AAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMG 222
Query: 319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY 378
R G +F + + PD+++ AK + + P+GA L + E ++ + T G +HG TY
Sbjct: 223 RTGKLFAHEWAGVTPDIMAVAKGIGGGF-PLGACLATEEAAKGM-----TPG--THGSTY 274
Query: 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD--SPIIGEIRGTGLILGT 436
G+P++ AV L + ++ V ++ + ++ D +I E+RG GL+LG
Sbjct: 275 GGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGL 334
Query: 437 EFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISK 495
+ G+L +GDN++ + PP I++ EE+DE + +
Sbjct: 335 KCVVPNRD-------------LVQALRDEGLLTVGAGDNVVRLLPPLIITEEEIDEALER 381
Query: 496 YGKALKA 502
+A ++
Sbjct: 382 LERAAES 388
>gnl|CDD|236336 PRK08742, PRK08742, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 472
Score = 210 bits (535), Expect = 4e-62
Identities = 115/437 (26%), Positives = 219/437 (50%), Gaps = 28/437 (6%)
Query: 71 PFTAGWQSTDVHPLV-IEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQL 129
P T + PLV I + EG+++ +G++YLD+++ W G +EPR+ AA AQ
Sbjct: 34 PCTQMREHPHTLPLVPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQA 93
Query: 130 NTLP------FYHSFWNRTTKPSLDLAKELLEMFTA----SKMAKVFFTNSGSEANDTQV 179
L F H P++ LA++LL + + ++KVF+ ++GS + +
Sbjct: 94 GELEQVMLAGFTHE-------PAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVAL 146
Query: 180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLH---TDC 236
K+ ++Y + G + +FIA + YHG T+ A ++ +P + + AP +L
Sbjct: 147 KMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVY---APLLLESLFAPS 203
Query: 237 PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIG-AGGVIPPPATYFE 295
P + A PG++ E+Y+ + A+ L+ L ++ P I A I EP + AGG+ Y
Sbjct: 204 PDAY-LAEPGQSAEDYALQAADALQAL-FEQSPGEICALILEPRLQCAGGMRMHHPAYLR 261
Query: 296 KVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVS 355
+ + + + IADE+ FGR GT+F C++ + PDL+ +K L+ ++P+ A+L +
Sbjct: 262 RARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLAT 321
Query: 356 PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV 415
++ + S +F H +Y+G+P++CA A+ L I+ + +++ + A +
Sbjct: 322 QQLYDAFLDDSRER-AFLHSHSYTGNPLACAAALATLDIFADDDVIARNQPTAARMTQLA 380
Query: 416 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN 475
+ P + ++R G+++ E + PFPP +G + G+++R GD
Sbjct: 381 AQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPLGDV 440
Query: 476 IMMSPPFIMSPEEVDEL 492
+ PP+ + ++ L
Sbjct: 441 LYWMPPYCVDEAQLALL 457
>gnl|CDD|181401 PRK08360, PRK08360, 4-aminobutyrate aminotransferase; Provisional.
Length = 443
Score = 206 bits (527), Expect = 3e-61
Identities = 120/432 (27%), Positives = 213/432 (49%), Gaps = 35/432 (8%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
PLV K+E + V+D+ G +Y+D L+ +G + PR+V A Q + L Y +
Sbjct: 24 PLVPVKAENAKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHY-TPIYGF 82
Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
L LA++L+E+ KV F SGS+AND +K Y ++K ++ +
Sbjct: 83 PVEPLLLAEKLIEI-APGDNPKVSFGLSGSDANDGAIKFARAYTK------RRKILSYLR 135
Query: 203 SYHGSTLIAASLSGLPALHQKFDL-PAPFVLHTDCPHYWRY---AHPGETEEEYSTRLAN 258
SY+GST A SL+GL + + V + P +R PG + E +
Sbjct: 136 SYYGSTYGAMSLTGL-DFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKE 194
Query: 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 318
E + EG +AA AEP+ G G+I PP YF+K++ ++ ++ IL + DEV G
Sbjct: 195 KFEGEVYAEG---VAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLG 251
Query: 319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY 378
R G F + + ++PD+++ K L +PI A + E+ + +L +H FT
Sbjct: 252 RTGKWFAIEHFGVEPDIITLGKPLGGG-LPISATIGRAEIMD-------SLPPLAHAFTL 303
Query: 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIA----PKFQDGVKAFSDSPIIGEIRGTGLIL 434
SG+PV+ A A+ ++ +E+N++++ K+ + ++ K +IG++RG GL++
Sbjct: 304 SGNPVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKH---ELIGDVRGIGLMI 360
Query: 435 GTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR-VSGDNIMMSPPFIMSPEEVDELI 493
G + ++ E E + + + G++V SG+ + + PP + E +DE +
Sbjct: 361 GVDLVKDRETKERAYEEAAKVVW---RAWELGLIVTFFSGNVLRIQPPLTIEKEVLDEGL 417
Query: 494 SKYGKALKATEE 505
+A++ EE
Sbjct: 418 DILEEAIEDVEE 429
>gnl|CDD|183175 PRK11522, PRK11522, putrescine--2-oxoglutarate aminotransferase;
Provisional.
Length = 459
Score = 204 bits (520), Expect = 5e-60
Identities = 122/428 (28%), Positives = 196/428 (45%), Gaps = 53/428 (12%)
Query: 92 SYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLD--- 148
+ + D G++++D L G +G P +V+A QL P + ++ LD
Sbjct: 74 NTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLH-------SQELLDPLR 126
Query: 149 --LAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHG 206
LAK L + T K+ FF NSG+E+ + +KL Y + G K FIA ++HG
Sbjct: 127 AMLAKTLAAL-TPGKLKYSFFCNSGTESVEAALKLAKAYQSPRG---KFTFIATSGAFHG 182
Query: 207 STLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILK 266
+L A S + + F P H P E T L+ K
Sbjct: 183 KSLGALSATAKSTFRKPFMPLLPGFRHV----------PFGNIEAMRTALSE------CK 226
Query: 267 EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC 326
+ + +AA I EP+ G GGVI PP Y V+ + ++ L I DEV GR G MF C
Sbjct: 227 KTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFAC 286
Query: 327 DKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA 386
+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA
Sbjct: 287 EHENVQPDILCLAKALGGGVMPIGATIATEEVFSVL-----FDNPFLHTTTFGGNPLACA 341
Query: 387 VAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKSP 444
A+ + + E+N+ Q + DG + + ++ E RG G+++ EF DN+
Sbjct: 342 AALATINVLLEQNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNE-- 399
Query: 445 NEPFPPEWGIGAYFGAQCEKHGMLVR---VSGDNIMMSPPFIMSPEEVDELISKYGKALK 501
IG F ++ + +LV + I + PP ++ E+ ++++ KAL
Sbjct: 400 ---------IGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCEQVLKAARKALA 450
Query: 502 ATEERVKE 509
A V+E
Sbjct: 451 AMRVSVEE 458
>gnl|CDD|179505 PRK02936, argD, acetylornithine aminotransferase; Provisional.
Length = 377
Score = 199 bits (509), Expect = 3e-59
Identities = 121/421 (28%), Positives = 198/421 (47%), Gaps = 58/421 (13%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
P+ I K +G+ V D NGK YLD +G+ LG P + A QL W+ +
Sbjct: 12 PIDIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQL------DDIWHVS 65
Query: 143 TKPSLDLAKELLEMFTA-SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
+ L +E+ + S VFF NSG+EAN+ +KL + K K + +
Sbjct: 66 NLFTNSLQEEVASLLAENSAGDLVFFCNSGAEANEAALKLARKHT------GKSKIVTFE 119
Query: 202 KSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLE 261
+S+HG T S +G + + F P + PG T + N+++
Sbjct: 120 QSFHGRTFGTMSATGQEKIKEGF---GPLL-------------PGFTHVPF-----NDIK 158
Query: 262 DLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321
L + E +AA + E V G GGVIP + ++VQ + KK+ L I DEV GR G
Sbjct: 159 AL-KEVMNEEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTG 217
Query: 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 381
T+F +++ + PD+V+ AK L + +P+GA++ E+ G SHG T+ G+
Sbjct: 218 TLFAYEQFGLDPDIVTVAKGLGNG-IPVGAMIGKKELGT-------AFGPGSHGSTFGGN 269
Query: 382 PVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK-AFSDSPIIGEIRGTGLILGTEFAD 440
P++ A A E L++ K+ + +E+V + F ++ + IRG GL++G E +
Sbjct: 270 PLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECTE 329
Query: 441 NKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDELISKYGKA 499
+P Q + G+LV +G N I + PP +++ EE+D+ + K
Sbjct: 330 EVAP-------------VIEQLREEGLLVLSAGPNVIRLLPPLVVTKEELDQAVYLLKKV 376
Query: 500 L 500
L
Sbjct: 377 L 377
>gnl|CDD|179933 PRK05093, argD, bifunctional
N-succinyldiaminopimelate-
aminotransferase/acetylornithine transaminase protein;
Reviewed.
Length = 403
Score = 198 bits (507), Expect = 1e-58
Identities = 130/423 (30%), Positives = 204/423 (48%), Gaps = 52/423 (12%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
+ + EGS V+D GK+Y+D G+ TALG P LV A Q L +H T
Sbjct: 23 EFIPVRGEGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKL--WHISNVFT 80
Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGR--PNKKKFIAR 200
+P+L LAK+L++ A + VFF NSG+EAN+ KL Y A R P K + IA
Sbjct: 81 NEPALRLAKKLIDATFAER---VFFANSGAEANEAAFKLARRY--ACDRHGPEKTEIIAF 135
Query: 201 QKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 260
S+HG TL S+ G P F P P T + N+L
Sbjct: 136 HNSFHGRTLFTVSVGGQPKYSDGFG-PKP---------------ADITHVPF-----NDL 174
Query: 261 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 320
+ T A + EP+ G GGVIP + + ++ + +++ L I DEV GR
Sbjct: 175 AAVKAVIDDHT-CAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRT 233
Query: 321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSG 380
G +F Y + PD+++ AKAL + PIGA+L + E++ +G +HG TY G
Sbjct: 234 GDLFAYMHYGVTPDILTSAKALGGGF-PIGAMLTTAEIASHFK-----VG--THGSTYGG 285
Query: 381 HPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFA 439
+P++CAVA I ++E V +F DG++ + + EIRG GL++G E
Sbjct: 286 NPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELK 345
Query: 440 DNKSPNEPFPPEW-GIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISKYG 497
P++ G F + G++V V+G +++ +P ++ ++DE ++++
Sbjct: 346 ----------PQYKGRARDFLNAAAEEGVMVLVAGPDVLRFAPSLVIEEADIDEGLARFE 395
Query: 498 KAL 500
KA+
Sbjct: 396 KAV 398
>gnl|CDD|132290 TIGR03246, arg_catab_astC, succinylornithine transaminase family.
Members of the seed alignment for this protein family
are the enzyme succinylornithine transaminase (EC
2.6.1.81), which catalyzes the third of five steps in
arginine succinyltransferase (AST) pathway, an
ammonia-releasing pathway of arginine degradation. All
seed alignment sequences are found within arginine
succinyltransferase operons, and all proteins that score
above 820.0 bits should function as succinylornithine
transaminase. However, a number of sequences extremely
closely related in sequence, found in different genomic
contexts, are likely to act in different biological
processes and may act on different substrates. This
model is desigated subfamily rather than equivalog,
pending further consideration, for this reason [Energy
metabolism, Amino acids and amines].
Length = 397
Score = 194 bits (495), Expect = 5e-57
Identities = 124/421 (29%), Positives = 206/421 (48%), Gaps = 48/421 (11%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
P + + EGS V+D GK+Y+D G+ ALG + P LV A Q + L +H T
Sbjct: 18 PFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKL--WHIGNGYT 75
Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
+P L LAK+L++ A K VFF NSG+EAN+ +KL Y +K + +A +
Sbjct: 76 NEPVLRLAKKLVDATFADK---VFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKN 132
Query: 203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 262
S+HG TL S+ G P Q F P P G Y N+L
Sbjct: 133 SFHGRTLFTVSVGGQPKYSQGFA-PLP---------------GGIKHAPY-----NDLAA 171
Query: 263 LILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT 322
+T A I EP+ G GGV+P + + ++ + +++ L I DEV GR G
Sbjct: 172 AKALISDKT-CAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGE 230
Query: 323 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 382
++ Y + PD+++ AKAL + PIGA+L + E++ + +G +HG TY G+P
Sbjct: 231 LYAYMHYGVTPDILTSAKALGGGF-PIGAMLTTTEIAAHL-----KVG--THGTTYGGNP 282
Query: 383 VSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFADN 441
++CAVA + L + ++ V + F DG++ + + EIRG GL++G
Sbjct: 283 LACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLT-- 340
Query: 442 KSPNEPFPPEW-GIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISKYGKA 499
+ G F + G++ ++G N++ +P ++S +++DE ++++ +A
Sbjct: 341 --------EAYQGKAKQFVNAAAEEGVIALIAGPNVVRFAPSLVISDDDIDEGLARFERA 392
Query: 500 L 500
+
Sbjct: 393 I 393
>gnl|CDD|181493 PRK08593, PRK08593, 4-aminobutyrate aminotransferase; Provisional.
Length = 445
Score = 193 bits (492), Expect = 5e-56
Identities = 121/443 (27%), Positives = 212/443 (47%), Gaps = 42/443 (9%)
Query: 82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTL----P--FY 135
+PLVI+ G+ + DV+GK Y+D LA +G + PR+V A AQ + P Y
Sbjct: 24 YPLVIDHGYGATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAYMY 83
Query: 136 HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 195
H P + LAK+L E+ +V F SGS+AND +K Y GRP
Sbjct: 84 HE-------PLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYT---GRPY-- 131
Query: 196 KFIARQKSYHGSTLIAASLSGLPA-LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254
I+ +YHGST + S+SG+ + +K+ P +H P +R E + +
Sbjct: 132 -IISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGM-YEEPDANFVE 189
Query: 255 RLANNLEDLILKEGP-ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV 313
L+++ K P + +A + E + G GG++ P YFE + +++ ILF D++
Sbjct: 190 EYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDI 249
Query: 314 ICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS 373
GR G ++I PDL+SF K+L+ MP+ AI+ E+ E +L + +
Sbjct: 250 QQGLGRTGKWSSISHFNITPDLMSFGKSLAGG-MPMSAIVGRKEIME-------SLEAPA 301
Query: 374 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGL 432
H FT +PVSCA A+ + + ++ +++++ + + + S +G++RG GL
Sbjct: 302 HLFTTGANPVSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGL 361
Query: 433 ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG-MLVRVSGDNIMMSPPFIMSPEEVDE 491
+G + +K + C +HG +++ V+G+ + PP +++ E++D
Sbjct: 362 SIGIDIVSDKKLKTRDNEAALKICNY---CFEHGVVIIAVAGNVLRFQPPLVITYEQLD- 417
Query: 492 LISKYGKALKATEERVKELKSQQ 514
AL E+ L++ +
Sbjct: 418 ------TALNTIEQAFTALEAGK 434
>gnl|CDD|235894 PRK06943, PRK06943, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 453
Score = 190 bits (484), Expect = 8e-55
Identities = 109/426 (25%), Positives = 202/426 (47%), Gaps = 20/426 (4%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
L + + EG+++YD +G++YLD+++ W G + PR+ AA QL+TL H+
Sbjct: 37 LLPVARGEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLE--HAMLAGC 94
Query: 143 T-KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
T +P+++LA E L T + FF + G+ A + +K+ ++ GR +K++F+
Sbjct: 95 THEPAIELA-ERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLA 153
Query: 202 KSYHGSTLIAASLSGLPALHQKFD---LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258
YHG T+ A ++ + +D A V D R A PGET + + R
Sbjct: 154 NGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDA----RGARPGETAADVAARALA 209
Query: 259 NLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 317
++ L E IAA I EP V A G+ +Y ++A+ +Y + IADE+
Sbjct: 210 DVRRL-FAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGC 268
Query: 318 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 377
GR GT F C++ + PD + +K +S Y+P+ +L + + + F H +
Sbjct: 269 GRTGTFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYD-DDVTRGFLHSHS 327
Query: 378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTE 437
Y+G+P++C A+ L ++ E +++ + + + + + + + P + +R G I +
Sbjct: 328 YTGNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLAAHPQVRHLRQRGTIFAFD 387
Query: 438 FADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYG 497
A + F F + +L+R G + + PP+++ +E+ L +
Sbjct: 388 VALDGDAARTFS------RRFFEAALERELLLRPIGTTVYLMPPYVLDDDEIAWLAERTR 441
Query: 498 KALKAT 503
L AT
Sbjct: 442 ATLDAT 447
>gnl|CDD|215335 PLN02624, PLN02624, ornithine-delta-aminotransferase.
Length = 474
Score = 189 bits (481), Expect = 3e-54
Identities = 116/440 (26%), Positives = 205/440 (46%), Gaps = 54/440 (12%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFWNR 141
P+V +++GS ++D GKKYLD L+ G P+++ A T Q L +F+N
Sbjct: 58 PVVFSRAKGSRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRAFYND 117
Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV--WYYNNALGRPNKKKFIA 199
+ A+ L MF + + N+G+E +T +KL W Y N+ ++
Sbjct: 118 KFP---EFAEYLTSMFGYDMVLPM---NTGAEGVETAIKLARKWGYEKKGIPKNEAIIVS 171
Query: 200 RQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259
+HG TL A S+S + F P + PG + ++ +
Sbjct: 172 CCGCFHGRTLAAISMSCDNEATRGF---GPLL-------------PGHLKVDF-----GD 210
Query: 260 LEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 317
L+ L I +E + IAAF+ EP+ G GV+ PP Y + V+ + K+++L IADE+
Sbjct: 211 LDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGL 270
Query: 318 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 377
R G M CD ++PD+V KAL +P+ A+L +V + HG T
Sbjct: 271 ARTGKMLACDWEEVRPDVVILGKALGGGVIPVSAVLADKDVML-------CIKPGEHGST 323
Query: 378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD--SPIIGEIRGTGLILG 435
+ G+P++ AVA+ AL++ ++ + E+ K+ + +D ++ +I E+RG GL+
Sbjct: 324 FGGNPLASAVAMAALQVVQDEKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNA 383
Query: 436 TEFADNKSPNEPFPPEWGIGAY-FGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELI 493
++ + AY + ++ G+L + + D I+ ++PP +S +E+ E
Sbjct: 384 VVL-NSPKLG-------PVSAYDVCLKLKERGLLAKPTHDTIIRLAPPLSISEDELQECS 435
Query: 494 SKYGKALKATEERVKELKSQ 513
L E + +L+S
Sbjct: 436 KALSDVL---EHDLPKLQSA 452
>gnl|CDD|179868 PRK04612, argD, acetylornithine transaminase protein; Provisional.
Length = 408
Score = 187 bits (476), Expect = 3e-54
Identities = 132/424 (31%), Positives = 216/424 (50%), Gaps = 49/424 (11%)
Query: 84 LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTT 143
+V+E+ +GS V+D G++YLD AG+ LG ++P LVAA T Q L +H+ +
Sbjct: 24 VVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKL--WHTSNVFYS 81
Query: 144 KPSLDLAKELLEMFTASKMA-KVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIAR-Q 201
P L LA+EL+ AS+ A KVF NSG+EAN+ +KLV + ++ GRP K+ I +
Sbjct: 82 APPLKLAEELVT---ASRFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFR 138
Query: 202 KSYHGSTLIAASLSGLPALHQKFD-LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 260
S+HG TL A + + P + ++ LP F RY N++
Sbjct: 139 GSFHGRTLAAVTATAQPKYQEGYEPLPGGF----------RYVD------------FNDV 176
Query: 261 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 320
E L +AA + EP+ G GGV+P + +V+A+ ++D L + DE+ C GR
Sbjct: 177 EALEAAMAGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRT 236
Query: 321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSG 380
GT+F + + PD+V+ AKAL + PIGA+L P+V+E + G +HG T+ G
Sbjct: 237 GTLFAHWQEQVTPDIVTLAKALGGGF-PIGAMLAGPKVAETMQ-----FG--AHGTTFGG 288
Query: 381 HPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFA 439
+P++ AVA AL+ I V + + + G++A + + ++RG GL+LG A
Sbjct: 289 NPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLA 348
Query: 440 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISKYGK 498
P G +HG+L+ +G +++ P ++ E+ + +++
Sbjct: 349 ---------PAHAGQAGAILDLAAEHGLLLLQAGPDVLRFVPALNLTDAELADGLARLRL 399
Query: 499 ALKA 502
AL
Sbjct: 400 ALAD 403
>gnl|CDD|180174 PRK05630, PRK05630, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 422
Score = 187 bits (476), Expect = 5e-54
Identities = 124/438 (28%), Positives = 214/438 (48%), Gaps = 44/438 (10%)
Query: 76 WQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY 135
+ + V ++ ++G ++ +G +D+++ W A G PRL AAA Q++T+ +
Sbjct: 16 YAAPGVRNRLVTSTDGVFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMS-H 74
Query: 136 HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 195
F T +P++ L ++LL + T + + VF+++SGS + + +K+ Y+ G P +
Sbjct: 75 VMFGGLTHEPAIKLTRKLLNL-TDNGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERT 133
Query: 196 KFIARQKSYHGSTLIAASL----SGLPAL------HQKFDLPAPFVLHTDCPHYWRYAHP 245
+ + + YHG T A S+ G+ +L Q F PAP V R + P
Sbjct: 134 RLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIF-APAPPV---------RGSSP 183
Query: 246 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKVQAVVKKY 304
E +LE LI ET+AA I EP++ GAGG+ E V+ + K+
Sbjct: 184 QEIS-----EYLRSLELLI----DETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKH 234
Query: 305 DILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHS 364
DIL IADE+ FGR G +F + PD++ KAL+ +M A L + +V+++I S
Sbjct: 235 DILLIADEIATGFGRTGELFATLAAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLI-S 293
Query: 365 QSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPII 424
N G+ HG T+ +P++CAVA +L+I + +QV +I + G+ + P +
Sbjct: 294 TPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKRIEAELIAGLSPLAHLPGV 353
Query: 425 GEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIM 484
++R G I E +P E A HG+ +R G + + PP+I
Sbjct: 354 ADVRVLGAIGVVEME------QPVDMEEATQAAV-----DHGVWLRPFGRLVYVMPPYIT 402
Query: 485 SPEEVDELISKYGKALKA 502
+ E++ ++ + A+KA
Sbjct: 403 TSEQIAQICAALAAAVKA 420
>gnl|CDD|179736 PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional.
Length = 396
Score = 182 bits (464), Expect = 1e-52
Identities = 125/432 (28%), Positives = 202/432 (46%), Gaps = 67/432 (15%)
Query: 82 HPL--VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSF 138
HPL VI ++EG +V D G +Y+D L+ G P+++ A Q + + +F
Sbjct: 20 HPLPIVISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRAF 79
Query: 139 WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV--WYYNNALGRPNKKK 196
+ P + +L + V N+G+EA +T +K W Y+ PNK +
Sbjct: 80 HSDQLGPWYEKVAKL------TGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAE 133
Query: 197 FIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 256
IA + ++HG T+ A SLS + F P + PG + Y
Sbjct: 134 IIACEGNFHGRTMAAVSLSSEEEYKRGF---GPML-------------PGIKKIPYG--- 174
Query: 257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA 316
+LE L P T AAF+ EP+ G G+ PP + + + + K+ ++LFIADE+
Sbjct: 175 --DLEALKAAITPNT-AAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTG 231
Query: 317 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF---S 373
GR G +F CD ++ PD+ KAL PI + + ++ LG F S
Sbjct: 232 LGRTGKLFACDWDNVTPDMYILGKALGGGVFPISCVAANRDI----------LGVFTPGS 281
Query: 374 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI 433
HG T+ G+P++CAV+I AL++ +E + E+ ++ F++ +K D+P+I E+RG GL
Sbjct: 282 HGSTFGGNPLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEI-DNPMIKEVRGRGLF 340
Query: 434 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEK---HGMLVRVSGDN-IMMSPPFIMSPEEV 489
+G E NEP P CE G+L + + + I +PP +++ EE+
Sbjct: 341 IGVEL------NEPARP----------YCEALKEEGLLCKETHETVIRFAPPLVITKEEL 384
Query: 490 DELISKYGKALK 501
D K L
Sbjct: 385 DWAFEKIKAVLS 396
>gnl|CDD|183486 PRK12381, PRK12381, bifunctional succinylornithine
transaminase/acetylornithine transaminase; Provisional.
Length = 406
Score = 179 bits (457), Expect = 2e-51
Identities = 129/435 (29%), Positives = 210/435 (48%), Gaps = 74/435 (17%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
P + + EGS ++D GK+Y+D G+ ALG + P L A Q + F+H+ T
Sbjct: 22 PFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASK--FWHTGNGYT 79
Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
+P L LAK+L++ A+ +VFF NSG+EAN+ +KL Y + +K +A +
Sbjct: 80 NEPVLRLAKKLID---ATFADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKN 136
Query: 203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLE- 261
++HG TL S G P Q F P P P Y N+L
Sbjct: 137 AFHGRTLFTVSAGGQPKYSQDF-APLP---------------PDIRHAAY-----NDLNS 175
Query: 262 --DLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319
LI + A I EP+ G GGVIP + + ++ + +++ L I DEV GR
Sbjct: 176 ASALI----DDQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGR 231
Query: 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379
G ++ Y + PD+++ AKAL + PIGA+L + + + V+ T+G +HG TY
Sbjct: 232 TGELYAYMHYGVTPDVLTTAKALGGGF-PIGAMLTTEKCASVM-----TVG--THGTTYG 283
Query: 380 GHPVSCAVAIEALKI---------YKERN--IVEQVNKIAPKFQDGVKAFSDSPIIGEIR 428
G+P++ AVA + L++ K+R+ VE++N I ++ FS EIR
Sbjct: 284 GNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINARYG----LFS------EIR 333
Query: 429 GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQ-CEKHGMLVRVSGDNIM-MSPPFIMSP 486
G GL++G E+ A +Q K G++V ++G N++ +P +S
Sbjct: 334 GLGLLIGCVLN----------AEYAGKAKQISQEAAKAGVMVLIAGPNVVRFAPALNISE 383
Query: 487 EEVDELISKYGKALK 501
EE+ + ++ +A +
Sbjct: 384 EEITTGLDRFARACE 398
>gnl|CDD|177748 PLN00144, PLN00144, acetylornithine transaminase.
Length = 382
Score = 177 bits (450), Expect = 1e-50
Identities = 124/434 (28%), Positives = 191/434 (44%), Gaps = 71/434 (16%)
Query: 86 IEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP----FYHSFWNR 141
+G +YDV GK+YLD AG+ ALG +P V A Q TL YH
Sbjct: 1 FVSGKGCKLYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNVYH----- 55
Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK----- 196
T P ++LAK L+ A + VFF NSG+EAN+ +K Y K
Sbjct: 56 -TIPQVELAKRLVASSFADR---VFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSA 111
Query: 197 --FIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254
F++ S+HG TL A +L+ F P + PG T EY
Sbjct: 112 TEFVSFSNSFHGRTLGALALTSKEQYRTPF---EPLM-------------PGVTFVEY-- 153
Query: 255 RLANNLE---DLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIAD 311
NLE LI K AA EPV G GG+ P + + ++A+ + L + D
Sbjct: 154 ---GNLEAARKLIQKG---KTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFD 207
Query: 312 EVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS 371
EV C GR G ++ + Y ++PD+++ AK L+ +PIGA+LV+ +V+ I+
Sbjct: 208 EVQCGLGRTGYLWAHEAYGVEPDIMTLAKPLAGG-LPIGAVLVTEKVASAINPG------ 260
Query: 372 FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK-AFSDSPIIGEIRGT 430
HG T++G P+ C A+ L + + V K ++ ++ +P + E+RG
Sbjct: 261 -DHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVRGV 319
Query: 431 GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--GDNIMMSPPFIMSPEE 488
GL++G + P C G+LV + GD + + PP ++S E
Sbjct: 320 GLLVGIQLDVPAGP-------------LVDACRDSGLLVLTAGKGDVVRLVPPLVISEAE 366
Query: 489 VDELISKYGKALKA 502
+++ + L A
Sbjct: 367 LEQAVEILADCLPA 380
>gnl|CDD|129783 TIGR00700, GABAtrnsam, 4-aminobutyrate aminotransferase,
prokaryotic type. This enzyme is a class III
pyridoxal-phosphate-dependent aminotransferase. This
model describes known bacterial examples of the enzyme.
The best archaeal matches are presumed but not trusted
to have the equivalent function. The degree of sequence
difference between this set and known eukaryotic
(mitochondrial) examples is greater than the distance to
some proteins known to have different functions, and so
separate models are built for prokaryotic and eukaryotic
sets. E. coli has two isozymes. Alternate names include
GABA transaminase, gamma-amino-N-butyrate transaminase,
and beta-alanine--oxoglutarate aminotransferase [Central
intermediary metabolism, Other].
Length = 420
Score = 177 bits (450), Expect = 3e-50
Identities = 113/426 (26%), Positives = 190/426 (44%), Gaps = 27/426 (6%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
P+ ++EG+ + DV+G + +D +G+ +G S PR+V A Q+ F H+ + T
Sbjct: 16 PVFAARAEGAILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAE--FTHTCFMVT 73
Query: 143 TKPS-LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
+ LA++L + S K F NSG+EA + VK+ Y GRP +A
Sbjct: 74 PYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSYT---GRPG---VVAFD 127
Query: 202 KSYHGSTLIAASLSGLPALHQ-KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 260
+HG T + +L+ ++ F AP V P+ +R + + LA
Sbjct: 128 HGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYR-DGLLDKQLSTDGELAAAR 186
Query: 261 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 320
++ G +AA + EPV G GG I P + + +++ I+FIADEV F R
Sbjct: 187 AIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFART 246
Query: 321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSG 380
G MF C+ +PDL++ AK+L+ +P+ + E+ + G G TY+G
Sbjct: 247 GAMFACEHEGPEPDLITTAKSLADG-LPLSGVTGRAEIMDAPAP-----GGL--GGTYAG 298
Query: 381 HPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFA 439
+P++CA A+ L I + ++E+ +I D + P IG++RG G ++ E
Sbjct: 299 NPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPRIGDVRGLGAMIAVELV 358
Query: 440 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFIMSPEEVDELISKY 496
D + P+ G+ G+L+ G I PP + E + E +
Sbjct: 359 DPGTTE----PDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPLTIGDELLSEGLDIL 414
Query: 497 GKALKA 502
L
Sbjct: 415 CAILAD 420
>gnl|CDD|180390 PRK06082, PRK06082, 4-aminobutyrate aminotransferase; Provisional.
Length = 459
Score = 176 bits (448), Expect = 1e-49
Identities = 112/420 (26%), Positives = 197/420 (46%), Gaps = 27/420 (6%)
Query: 85 VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTK 144
V+ +EG Y+ DV+GKKY+D G LG P ++ Q+ LPF S T +
Sbjct: 57 VLASAEGIYIEDVDGKKYMD-FHGNNVHQLGYGHPHVIEKVKEQMAKLPF--SPRRFTNE 113
Query: 145 PSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSY 204
+++ A++L E+ ++ +V F G+ A +KL + K ++ S+
Sbjct: 114 TAIECAEKLTEI-AGGELNRVLFAPGGTSAIGMALKLARHITG------NFKVVSLWDSF 166
Query: 205 HGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLI 264
HG++L A S+ G Q V P Y + A+ LE +I
Sbjct: 167 HGASLDAISVGGEACFRQGMGPLMAGVERI--PPAVSYRGAFPDADGSDVHYADYLEYVI 224
Query: 265 LKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF 324
KEG I AFIAE V +P A Y+++V+ + K+++L I DE+ GR G F
Sbjct: 225 EKEG--GIGAFIAEAVRNTDVQVPSKA-YWKRVREICDKHNVLLIIDEIPNGMGRTGEWF 281
Query: 325 GCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVS 384
Y I+PD++ K L +PI A++ + + + +LG ++H P+
Sbjct: 282 THQAYGIEPDILCIGKGLGGGLVPIAAMITKDKYNT---AAQISLGHYTH----EKSPLG 334
Query: 385 CAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFADNKS 443
CA A+ +++ ++ ++E+V + ++ + P+IG++RG GL+ G E ++
Sbjct: 335 CAAALATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRH 394
Query: 444 PNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDELISKYGKALKA 502
E E Y +C +G+ +VS N I +SPP I++ EE+ + ++ +A+
Sbjct: 395 TKERAYDEAEAVLY---RCLNNGLSFKVSQGNVIQLSPPLIITREELTQALAILEEAIAK 451
>gnl|CDD|180441 PRK06173, PRK06173, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 429
Score = 174 bits (444), Expect = 2e-49
Identities = 128/444 (28%), Positives = 219/444 (49%), Gaps = 49/444 (11%)
Query: 71 PFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 130
P+++ V+P +E+++G + +G++ +D ++ W G + PRL AAAT QL
Sbjct: 17 PYSSVTDPIPVYP--VERADGVMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLA 74
Query: 131 TLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALG 190
+ + F T +P+++LA++LLE+ S + K+FF +SGS A + +K+ Y A G
Sbjct: 75 KMS-HIMFGGFTHEPAVELAQKLLEILPPS-LNKIFFADSGSVAVEVAMKMALQYQQAKG 132
Query: 191 RPNKKKFIARQKSYHGSTLIAASL------------SGLPALHQKFDLPAPFVLHTDCPH 238
+ KF + YHG T A S+ LP Q F LP P +
Sbjct: 133 EVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPV--QYF-LPQPSI------- 182
Query: 239 YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKV 297
+ EE++ L+DL+ ++G E IAA I EPV+ GAGG+ TY K
Sbjct: 183 --------KFGEEWNDEAIEPLQDLLEQKGDE-IAALILEPVVQGAGGMYFYSPTYLVKA 233
Query: 298 QAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPE 357
+ + +Y +L I DE+ FGR G +F + + PD++ KAL+ Y+ + A + +
Sbjct: 234 RELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPDIMCIGKALTGGYLTLSATITTEA 293
Query: 358 VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA 417
+++ I S F HG T+ +P++CA+A E++++ E + + +I + + +
Sbjct: 294 IAQTI--CSGEAKCFMHGPTFMANPLACAIAAESIRLLLESPWQQNIQRIEAQLKQELAP 351
Query: 418 FSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM 477
++ + E+R G I E K P + F +HG+ VR G +
Sbjct: 352 AAEFDSVAEVRVLGAIGVVEM---KEPVNMAT----LQPRF----VEHGIWVRPFGKLVY 400
Query: 478 MSPPFIMSPEEVDELISKYGKALK 501
+ PPFI+SP+E+ +L S + LK
Sbjct: 401 IMPPFIISPDELSQLTSGLLRVLK 424
>gnl|CDD|234848 PRK00854, rocD, ornithine--oxo-acid transaminase; Reviewed.
Length = 401
Score = 174 bits (442), Expect = 3e-49
Identities = 125/423 (29%), Positives = 192/423 (45%), Gaps = 52/423 (12%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFWNR 141
+V+ + EG +V+D +G +YLD L+ G P+++AA Q L +F N
Sbjct: 24 DVVLTRGEGVWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFRN- 82
Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV--WYYNNALGRP-NKKKFI 198
L E L T S KV NSG+EA +T +K V W Y G P + + I
Sbjct: 83 ---DQLAPLYEELAALTGSH--KVLPMNSGAEAVETAIKAVRKWGYE-VKGVPEGQAEII 136
Query: 199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258
++HG TL S P F PF PG + A
Sbjct: 137 VCADNFHGRTLSIVGFSTDPDARGGF---GPFT-------------PGFRVVPFGD--AE 178
Query: 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 318
LE I P T+A F+ EP+ G GVI PPA YF +V+ + ++ I DE+ G
Sbjct: 179 ALEAAI---TPNTVA-FLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLG 234
Query: 319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY 378
R G + + I+ D+ KALS + P+ A+L + EV V+ HG T+
Sbjct: 235 RTGKLLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKPG-------QHGSTF 287
Query: 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEF 438
G+P++CAVA ALK+ E ++E ++ F +G+++ S I+ E+RG GL+L E
Sbjct: 288 GGNPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSIR-SNIVREVRGRGLMLAVEL 346
Query: 439 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR-VSGDNIMMSPPFIMSPEEVDELISKYG 497
PE G + ++ G+L + I ++PP +++ E+VD + +
Sbjct: 347 E----------PEAGGARQYCEALKERGLLAKDTHDHTIRLAPPLVITREQVDWALEQIA 396
Query: 498 KAL 500
K L
Sbjct: 397 KVL 399
>gnl|CDD|223080 COG0001, HemL, Glutamate-1-semialdehyde aminotransferase [Coenzyme
metabolism].
Length = 432
Score = 174 bits (443), Expect = 5e-49
Identities = 98/358 (27%), Positives = 160/358 (44%), Gaps = 65/358 (18%)
Query: 78 STDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS 137
S +P+ IE+ +G+Y+ DV+G +Y+D + G LG + P +V A QL +
Sbjct: 31 SVGGYPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLSF-- 88
Query: 138 FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF 197
T+ ++LA+ L+E + KV F NSG+EA + ++L A + K
Sbjct: 89 --GAPTELEVELAELLIERV--PSIEKVRFVNSGTEATMSAIRL------ARAYTGRDKI 138
Query: 198 IARQKSYHGS-------------TLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAH 244
I + YHG TL + S G+PA K L P+
Sbjct: 139 IKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY-------------- 184
Query: 245 PGETEEEYSTRLANNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302
N+LE L +E + IAA I EPV G GV+PP + E ++ + +
Sbjct: 185 -------------NDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTE 231
Query: 303 KYDILFIADEVICAFGRLGTMFGC--DKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSE 360
++ L I DEVI F R+ G Y ++PDL + K + +PIGA E+ E
Sbjct: 232 EHGALLIFDEVITGF-RVA--LGGAQGYYGVEPDLTTLGKIIGGG-LPIGAFGGRAEIME 287
Query: 361 VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALK-IYKERNIVEQVNKIAPKFQDGVKA 417
+ LG T SG+P++ A + L+ + E + E+++ + + +G++A
Sbjct: 288 QL----APLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRA 341
>gnl|CDD|181189 PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Validated.
Length = 428
Score = 167 bits (426), Expect = 8e-47
Identities = 124/439 (28%), Positives = 218/439 (49%), Gaps = 40/439 (9%)
Query: 71 PFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 130
P+T+ V+P + +EG + +G++ +D ++ W G + P+L AA +Q++
Sbjct: 16 PYTSMTSPLPVYP--VVSAEGCELILADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQID 73
Query: 131 TLPFYH-SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNAL 189
+ H F T P+++L ++L+ M T + VF +SGS A + +K+ Y A
Sbjct: 74 AMS--HVMFGGITHPPAIELCRKLVAM-TPQPLECVFLADSGSVAVEVAMKMALQYWQAK 130
Query: 190 GRPNKKKFIARQKSYHGSTLIAASLS----GLPALHQKFDLPAPFVLHTDCPHYWRYAHP 245
G P +++F+ + YHG T A S+ + +L++ + LP + + A
Sbjct: 131 GEP-RQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGY-LP---------ENLFAPAPQ 179
Query: 246 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGV-IPPPATYFEKVQAVVKK 303
+ E+ R L+ E IAA I EP++ GAGG+ I P + ++V+ + +
Sbjct: 180 SRFDGEWDERDIAPFARLMAAHRHE-IAAVILEPIVQGAGGMRIYHPE-WLKRVRKLCDR 237
Query: 304 YDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIH 363
IL IADE+ FGR G +F C+ I PD++ KAL+ M + A L + EV+E I
Sbjct: 238 EGILLIADEIATGFGRTGKLFACEHAGIAPDILCLGKALTGGTMTLSATLTTREVAETI- 296
Query: 364 SQSN-TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSP 422
SN G F HG T+ G+P++CAVA +L + + + +QV I + ++ + D+P
Sbjct: 297 --SNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEAQLREELAPLRDAP 354
Query: 423 IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPF 482
++ ++R G I E P + +F Q G+ +R G I + PP+
Sbjct: 355 MVADVRVLGAIGVVET------TRPVNMA-ALQRFFVEQ----GVWIRPFGKLIYLMPPY 403
Query: 483 IMSPEEVDELISKYGKALK 501
I+ PE++ L + +A++
Sbjct: 404 IILPEQLQRLTAAVNRAVQ 422
>gnl|CDD|132415 TIGR03372, putres_am_tran, putrescine aminotransferase. Members of
this family are putrescine aminotransferase, as found in
Escherichia coli, Erwinia carotovora subsp. atroseptica,
and closely related species. This pyridoxal phosphate
enzyme, as characterized in E. coli, can act also on
cadaverine and, more weakly, spermidine [Central
intermediary metabolism, Polyamine biosynthesis].
Length = 442
Score = 167 bits (423), Expect = 3e-46
Identities = 125/430 (29%), Positives = 188/430 (43%), Gaps = 53/430 (12%)
Query: 76 WQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY 135
WQ+ ++ L+ D G +++D L G +G P ++AA QL P
Sbjct: 61 WQAGGLNTLI----------DTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPL- 109
Query: 136 HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 195
HS P L + L T K+ FF NSG+E+ + +KL Y + G K
Sbjct: 110 HS--QELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRG---KF 164
Query: 196 KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255
FIA ++HG +L A S + PA + F P H E
Sbjct: 165 TFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHV----------AFGDIEAMLKA 214
Query: 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 315
L K+ + +AA I EP+ G GGVI PP Y V+A+ ++ L I DEV
Sbjct: 215 LNE------CKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQT 268
Query: 316 AFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHG 375
GR G MF C+ ++PD++ AKAL MPIGA + + V V+ F H
Sbjct: 269 GMGRTGKMFACEHEGVQPDILCLAKALGGGVMPIGATIATEAVFSVLFDN-----PFLHT 323
Query: 376 FTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-DSP-IIGEIRGTGLI 433
T+ G+P++CA A+ + E+N+ Q DG + + + P +I E RG GL+
Sbjct: 324 TTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLL 383
Query: 434 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFIMSPEEVD 490
+ EF DN+ IG F + + +LV + +N I + PP ++ E+
Sbjct: 384 MAIEFRDNE-----------IGYAFAKELFQQNILVAGTLNNAKSIRIEPPLTITIEQCA 432
Query: 491 ELISKYGKAL 500
+I AL
Sbjct: 433 LVIKAAKDAL 442
>gnl|CDD|235885 PRK06918, PRK06918, 4-aminobutyrate aminotransferase; Reviewed.
Length = 451
Score = 167 bits (424), Expect = 3e-46
Identities = 115/431 (26%), Positives = 212/431 (49%), Gaps = 27/431 (6%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
P + + G+ V DV+G +Y+D + +G S P++ A Q++ + H+ +N
Sbjct: 37 PTFAQSANGALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQ--YIHTGFNVM 94
Query: 143 TKPS-LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
++LA++L + S KV F NSG+EA + VK+ Y ++ I+
Sbjct: 95 MYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTK------RQGIISFS 148
Query: 202 KSYHGSTLIAASL-SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 260
+ +HG TL+ ++ S + F AP V P+ +R G TEE+Y +
Sbjct: 149 RGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPE-GLTEEQYDDFMIEEF 207
Query: 261 EDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319
++ + E PETIAA + EPV G GG I P + ++V+ + ++ ILF+ADE+ F R
Sbjct: 208 KNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFAR 267
Query: 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379
G F + + + PDL++ +K+L A +PI ++ E+ + S LG TY+
Sbjct: 268 TGKYFAIEHFDVVPDLITVSKSL-GAGVPISGVIGRKEIMD--ESAPGELGG-----TYA 319
Query: 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-DSPIIGEIRGTGLILGTEF 438
G P+ CA A+ L I ++ N+ ++ ++ + + IG++RG G + E
Sbjct: 320 GSPLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFEL 379
Query: 439 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFIMSPEEVDELISK 495
++ E P+ + A + K G+L+ +G I + P +++ E+++E ++
Sbjct: 380 VQDRKTKE---PDKTLTANICKEANKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTI 436
Query: 496 YGKALKATEER 506
++L+A E+
Sbjct: 437 IEESLQACYEK 447
>gnl|CDD|129792 TIGR00709, dat, 2,4-diaminobutyrate 4-transaminases. This family
consists of L-diaminobutyric acid transaminases. This
general designation covers both 2.6.1.76
(diaminobutyrate-2-oxoglutarate transaminase, which uses
glutamate as the amino donor in DABA biosynthesis), and
2.6.1.46 (diaminobutyrate--pyruvate transaminase, which
uses alanine as the amino donor). Most members with
known function are 2.6.1.76, and at least some
annotations as 2.6.1.46 in current databases at time of
model revision are incorrect. A distinct branch of this
family contains examples of 2.6.1.76 nearly all of which
are involved in ectoine biosynthesis. A related enzyme
is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also
called GABA transaminase. These enzymes all are
pyridoxal phosphate-containing class III
aminotransferase [Central intermediary metabolism,
Other].
Length = 442
Score = 164 bits (417), Expect = 2e-45
Identities = 127/445 (28%), Positives = 206/445 (46%), Gaps = 39/445 (8%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
P K++G +V DV GK+YLD LAG ALG + P + L + H+ + T
Sbjct: 22 PTAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTL-DLT 80
Query: 143 TKPSLDLAKELLEMFTASKMA-KVFFTN-SGSEANDTQVKLVWYYNNALGRPNKKKFIAR 200
T + LL + KM K+ F SG++A + +KL Y GR N I+
Sbjct: 81 TPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYT---GRTN---VISF 134
Query: 201 QKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR--YAHPGETEEEYSTR-LA 257
+HG T+ A +++G + P V PH +R + GE S
Sbjct: 135 SGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFE 194
Query: 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 317
N +ED+ + G + AA I E + G GGV+ P+ + +K++ V +K+DI I DEV F
Sbjct: 195 NFIEDV--ESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGF 252
Query: 318 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 377
GR GTMF + I+PD V +KA+ +P+ +L++PE + H T
Sbjct: 253 GRSGTMFAFEHAGIEPDFVVMSKAVGGG-LPLAVLLIAPEF--------DAWQPAGHTGT 303
Query: 378 YSGHPVSCAVAIEALKIYKE----RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI 433
+ G+ ++ EAL +K+ +N E+ +I D +K P IG +RG GL+
Sbjct: 304 FRGNQLAMVTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKEH---PCIGNVRGRGLM 360
Query: 434 LGTEFADNKSPNE---PFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFIMSPE 487
G D + + +P + + A C ++G+L+ G + P + E
Sbjct: 361 QGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGREGEVFRLLCPITIDQE 420
Query: 488 EVDELISKYGKALKATEERVKELKS 512
E +E IS++ +A+ EE + E++
Sbjct: 421 ECEEGISRFKQAV---EEALAEVRL 442
>gnl|CDD|235716 PRK06149, PRK06149, hypothetical protein; Provisional.
Length = 972
Score = 162 bits (411), Expect = 1e-42
Identities = 127/430 (29%), Positives = 208/430 (48%), Gaps = 57/430 (13%)
Query: 81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQ---LNTLPFYHS 137
P IE+ +++D+ G+ YLD + + T LG PRL AAA Q LNT +H
Sbjct: 566 ADPPQIERGWRHHLFDMAGRSYLDMVNNV--TVLGHGHPRLAAAAARQWSLLNTNSRFH- 622
Query: 138 FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF 197
+ + S LA + + VF NSGSEAND ++L W + GR +
Sbjct: 623 -YAAVAEFSERLAALAPD-----GLDTVFLVNSGSEANDLAIRLAWAAS---GRRD---V 670
Query: 198 IARQKSYHGSTLIAASLSGLPALHQKFDLPA-----PFVLHT-DCPHYWRYAHPG-ETEE 250
++ ++YHG T+ ++S A D P P +H + P+ +R G ++
Sbjct: 671 VSVLEAYHGWTVATDAVSTSIA-----DNPQALETRPDWVHPVESPNTYRGRFRGADSAA 725
Query: 251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA 310
+Y + LE+L +A FI EPV G G I P Y ++V A V+ + IA
Sbjct: 726 DYVRDVVAQLEELDASGRG--LAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIA 783
Query: 311 DEVICAFGRLGTMF-GCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTL 369
DEV +GRLG F G ++ + PD+++ AK + + + P+GA++ E++E + ++
Sbjct: 784 DEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGMGNGH-PLGAVITRREIAEALEAE---- 838
Query: 370 GSF--SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGE 426
G F S G G PVSC + + L + +E + E ++ + ++A +D P+IG
Sbjct: 839 GYFFSSTG----GSPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHPLIGA 894
Query: 427 IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH---GMLVRVSGD--NIM-MSP 480
+ G GL LG E ++ EP E A C++ G++++ +GD NI+ + P
Sbjct: 895 VHGMGLYLGVELVRDRQTLEPATEE------TAAICDRLLELGVIMQPTGDHLNILKIKP 948
Query: 481 PFIMSPEEVD 490
P + E D
Sbjct: 949 PLCLDRESAD 958
>gnl|CDD|235889 PRK06931, PRK06931, diaminobutyrate--2-oxoglutarate
aminotransferase; Provisional.
Length = 459
Score = 156 bits (397), Expect = 2e-42
Identities = 126/433 (29%), Positives = 203/433 (46%), Gaps = 32/433 (7%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNT-LPFYHSFWNR 141
PL I K++G +V DV G +YLD LAG ALG + P ++ + L + LP H+ +
Sbjct: 41 PLAIAKAQGVWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPL-HTL-DL 98
Query: 142 TTKPSLDLAKELLEMFTASKMAKVF-FTN-SGSEANDTQVKLVWYYNNALGRPNKKKFIA 199
TT ++ LL + FT SG++A + +KL Y GR N I+
Sbjct: 99 TTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYT---GRSN---VIS 152
Query: 200 RQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR--YAHPGETEEEYSTRLA 257
YHG T A +++G + + P V PH +R GE + T
Sbjct: 153 FSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYF 212
Query: 258 NNL-EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA 316
N ED+ + G AA I E + G GGV P P + +K++ V +K+ IL I DEV
Sbjct: 213 ENFIEDV--ESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAG 270
Query: 317 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF 376
F R G MF + I+PD++ +KA+ +P+ A+L I + + H
Sbjct: 271 FARTGKMFAFEHAGIEPDIIVMSKAVGGG-LPL-AVL-------GIKKEFDAWQPGGHTG 321
Query: 377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILG 435
T+ G+ ++ A + LKI KE N+ + + + + P IG +RG GL++G
Sbjct: 322 TFRGNQLAMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIG 381
Query: 436 TEFADNKSPNE---PFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFIMSPEEV 489
E D + P + +P + + A C ++G+L+ G N + + PP +++ E
Sbjct: 382 IEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGGRNGNVVRLLPPLLITQAEC 441
Query: 490 DELISKYGKALKA 502
+E I ++ +AL A
Sbjct: 442 EEFIDRFEQALLA 454
>gnl|CDD|236149 PRK08088, PRK08088, 4-aminobutyrate aminotransferase; Validated.
Length = 425
Score = 155 bits (393), Expect = 3e-42
Identities = 104/382 (27%), Positives = 180/382 (47%), Gaps = 46/382 (12%)
Query: 81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS-FW 139
+HP+ +++E V+DV G++YLD G+ G P++VAA AQL H+ F
Sbjct: 22 IHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKK--LSHTCFQ 79
Query: 140 NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIA 199
+P L+L +++ + K +GSEA + VK+ G IA
Sbjct: 80 VLAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSG------VIA 133
Query: 200 RQKSYHGSTLIAASLSGLPALHQK---------FDLPAPFVLHTDCPHYWRYAHPGETEE 250
+YHG T +L+G + + P LH G +E+
Sbjct: 134 FTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLH------------GVSED 181
Query: 251 EYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILF 308
+ + + I K PE IAA I EPV G GG + ++++A+ ++ I+
Sbjct: 182 DAIASI-----ERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIML 236
Query: 309 IADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNT 368
IADEV GR GT+F ++ + DL +FAK+++ + P+ + EV + I
Sbjct: 237 IADEVQTGAGRTGTLFAMEQMGVAADLTTFAKSIAGGF-PLAGVTGRAEVMDAI------ 289
Query: 369 LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEI 427
G TY+G+P++CA A+ LK++++ N++++ N + K +DG+ A P IG++
Sbjct: 290 -APGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDV 348
Query: 428 RGTGLILGTEFADNKSPNEPFP 449
RG G ++ E ++ ++P
Sbjct: 349 RGLGAMIAIELFEDGDHSKPNA 370
>gnl|CDD|179636 PRK03715, argD, acetylornithine transaminase protein; Provisional.
Length = 395
Score = 152 bits (386), Expect = 2e-41
Identities = 116/376 (30%), Positives = 174/376 (46%), Gaps = 85/376 (22%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQ----LNTLPFYHSF 138
+V +GS++YD NGK+YLD + G LG P +V A AQ +N P +F
Sbjct: 19 DIVFTHGKGSWLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSP---AF 75
Query: 139 WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK--- 195
+N +P LA L + S KVFF NSG+EAN+ +KL + GR +K
Sbjct: 76 YN---EPMAKLAGLLTQ---HSCFDKVFFANSGAEANEGAIKLARKW----GRKHKNGAY 125
Query: 196 KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255
+ I S+HG TL S SG P F AP V PG + E
Sbjct: 126 EIITFDHSFHGRTLATMSASGKPGWDTIF---APQV-------------PGFPKAEL--- 166
Query: 256 LANNL---EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADE 312
N++ E LI +T+A + EPV G GGVIP + ++++A+ K++ +L I DE
Sbjct: 167 --NDIASVEKLI---TDKTVAVML-EPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDE 220
Query: 313 VICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF 372
V GR GT+F + I+PD+++ K + +P+ A+L EV+ F
Sbjct: 221 VQTGCGRTGTLFAYELSGIEPDIMTLGKGIGGG-VPLAALLAKAEVA-----------VF 268
Query: 373 SH---GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA-----------F 418
G TY+G+P+ AV + ++ Q+ +AP F +GV+A
Sbjct: 269 EAGDQGGTYNGNPLMTAVGVA---------VISQL--LAPGFLEGVRARGEYLKEKLLEL 317
Query: 419 SDSPIIGEIRGTGLIL 434
S+ + RG GL+
Sbjct: 318 SEERGLEGERGEGLLR 333
>gnl|CDD|179803 PRK04260, PRK04260, acetylornithine aminotransferase; Provisional.
Length = 375
Score = 151 bits (384), Expect = 3e-41
Identities = 116/414 (28%), Positives = 189/414 (45%), Gaps = 70/414 (16%)
Query: 88 KSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 147
K+EG+Y+ D +GKKYLD +G+ T LG P++ A Q + +HS P+L
Sbjct: 17 KAEGNYLIDTDGKKYLDFSSGIGVTNLG-FHPQVQQALQKQAGLI--WHS-------PNL 66
Query: 148 ---DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSY 204
L +E+ + K FF NSG+EAN+ +K+ A G K++ I Q S+
Sbjct: 67 YLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIA---RKATG---KQEIITFQNSF 120
Query: 205 HGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLI 264
HG T + S +G + F V PH+ YA + N+L + +
Sbjct: 121 HGRTFGSMSATGQDKIKDGF---GDGV-----PHF-SYA------------IFNDL-NSV 158
Query: 265 LKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF 324
+ AA + E V G GV+P + + + ++ IL I DEV GR G ++
Sbjct: 159 KALVNKNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLY 218
Query: 325 GCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF---SHGFTYSGH 381
+ Y I+PD+ + AK L++ +P+GA+L ++S+ G+F SHG T+ G+
Sbjct: 219 AFEHYGIEPDIFTLAKGLANG-VPVGAML----------AKSSLGGAFGYGSHGSTFGGN 267
Query: 382 PVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV-KAFSDSPIIGEIRGTGLILGTEFAD 440
+S A A L I +EQ + Q+ + KA D + +RG G ++G E
Sbjct: 268 KLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVRGLGYMIGIETTA 327
Query: 441 NKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDELI 493
+ S G++V +G N I + PP ++ EE+++ I
Sbjct: 328 DLSQ-------------LVEAARDKGLIVLTAGTNVIRLLPPLTLTKEEIEQGI 368
>gnl|CDD|235892 PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate
aminotransferase; Provisional.
Length = 464
Score = 152 bits (386), Expect = 9e-41
Identities = 128/458 (27%), Positives = 205/458 (44%), Gaps = 75/458 (16%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQL-NTLPFYHSFWNR 141
PL ++++ G YV DV G++++D LAG ALG + P ++ A L + LP +
Sbjct: 46 PLALKRARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLH------ 99
Query: 142 TTKPSLDLAKELLEMFTA----------SKMAKVFFTN-SGSEANDTQVKLVWYYNNALG 190
+LDL + + F ++ AK+ F +G++A + +KLV A G
Sbjct: 100 ----TLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLV---KTATG 152
Query: 191 RPNKKKFIARQKSYHGSTLIAASLSG-----------LPALHQKFDLPAPFVLHTDCPHY 239
R F Q YHG + A SL G LP + F LP P+ CP
Sbjct: 153 RSTVLSF---QGGYHGMSQGALSLMGNLGPKKPLGALLPGVQ--F-LPYPY--DYRCP-- 202
Query: 240 WRYAHPGETEEEYSTR-LANNLEDLILKEGPE----TIAAFIAEPVIGAGGVIPPPATYF 294
+ GE + L N L+D PE AA I E V G GGVIP P +
Sbjct: 203 --FGLGGEAGVRANLHYLENLLDD------PESGVVLPAAVILEVVQGEGGVIPAPIEWL 254
Query: 295 EKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILV 354
++ + ++ I I DE+ FGR G MF + I PD+V +KA IG L
Sbjct: 255 RGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVLSKA-------IGGSL- 306
Query: 355 SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDG 414
P V +T +H T+ G+ ++ A L+ KE + E + + ++
Sbjct: 307 -PLAVVVYREWLDTWQPGAHAGTFRGNQMAMAAGSATLRYIKEHRLAEHAAAMGERLREH 365
Query: 415 VKAF-SDSPIIGEIRGTGLILGTEFAD-NKSPN-EPFPPEWG-IGAYFGAQCEKHGMLVR 470
++ D P +G++RG GL+LG E D P+ PP G + + +C + G+++
Sbjct: 366 LRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILE 425
Query: 471 VSGDN---IMMSPPFIMSPEEVDELISKYGKALKATEE 505
+ G + + PP I++ E++DE+ + +A+ A
Sbjct: 426 LGGRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAAVA 463
>gnl|CDD|235685 PRK06058, PRK06058, 4-aminobutyrate aminotransferase; Provisional.
Length = 443
Score = 150 bits (382), Expect = 2e-40
Identities = 112/430 (26%), Positives = 194/430 (45%), Gaps = 36/430 (8%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS-FWNR 141
P+ + ++ G V DV+G + +D +G+ T++G S PR+V A Q+ F H+ F
Sbjct: 39 PVYVARAGGGIVEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVAR--FTHTCFMVT 96
Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
+ + +A++L + + NSG+EA + VK+ + GR +
Sbjct: 97 PYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIA---RSYTGRQ---AVVVFD 150
Query: 202 KSYHGSTLIAASLSG--LPALHQKFDLPAPFVLHTDCPHYWRYAH-PGETEEEYSTRLAN 258
+YHG T + +L+ +P F AP V + +R EE + R
Sbjct: 151 HAYHGRTNLTMALTAKSMPYKSG-FGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAIT 209
Query: 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 318
+E + G + +AA I EP+ G GG I P + + ++ ++FIADEV F
Sbjct: 210 VIEKQV---GADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFA 266
Query: 319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY 378
R G F C+ I PDL++ AK ++ +P+ A+ E+ + H LG TY
Sbjct: 267 RTGAWFACEHEGIVPDLITTAKGIAGG-LPLSAVTGRAEIMDAPHPGG--LGG-----TY 318
Query: 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTE 437
G+PV+CA A+ A++ +E ++V + +I D ++A + IG++RG G ++ E
Sbjct: 319 GGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIE 378
Query: 438 F--ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNIMMSPPFIMSPEEVDEL 492
P+ E + A G++V G + I + PP ++ E + E
Sbjct: 379 LVKPGTTEPD----AE--LTKALAAAAHAAGVIVLTCGTYGNVIRLLPPLVIGDELLREG 432
Query: 493 ISKYGKALKA 502
+ AL
Sbjct: 433 LDVLEAALAD 442
>gnl|CDD|168145 PRK05639, PRK05639, 4-aminobutyrate aminotransferase; Provisional.
Length = 457
Score = 150 bits (379), Expect = 7e-40
Identities = 119/433 (27%), Positives = 216/433 (49%), Gaps = 40/433 (9%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
PLV ++ G+ + DV+G ++D LAG + G S P+LV A Q+ + HS T
Sbjct: 36 PLVPKRGFGALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQ--HSMIGYT 93
Query: 143 -TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
++ ++ +A++L E+ + + KV F SGS+A D +K+ + + RP FI
Sbjct: 94 HSERAIRVAEKLAEI-SPIENPKVLFGLSGSDAVDMAIKVSKF---STRRPWILAFIG-- 147
Query: 202 KSYHGSTLIAASLSGLPALHQK-FDLPAPFVLHTDCPHYWR-------YAHPGETEEEYS 253
+YHG TL A S++ + ++ F P V+ P+ +R Y P +E
Sbjct: 148 -AYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEP----DELI 202
Query: 254 TRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIAD 311
R + LE+ + P+ +AA AEP+ G G++ PP +F++++ ++ ++ IL + D
Sbjct: 203 NRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMD 262
Query: 312 EVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS 371
EV GR G F + + +KPDL+ F K ++S M + ++ E+ + L S
Sbjct: 263 EVQTGIGRTGKWFASEWFEVKPDLIIFGKGVASG-MGLSGVIGRKELMD--------LTS 313
Query: 372 FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGT 430
S T + +PV A A L+I +E N+++ K+ + + +S +IG++RG
Sbjct: 314 GSALLTPAANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGK 373
Query: 431 GLILGTEFA-DNKSPNEPFPPEWGIGAY-FGAQCEKHGMLVRVSGDNIMMSPPFIMSPEE 488
GL++G E +N P+ + A+ G +GM G+ I ++PP +++ E
Sbjct: 374 GLMIGVEIVKENGKPDPELTGKICWRAFELGLILPSYGMF----GNVIRITPPLVITKEI 429
Query: 489 VDELISKYGKALK 501
++ + +A+K
Sbjct: 430 AEKGLEIMERAIK 442
>gnl|CDD|236032 PRK07495, PRK07495, 4-aminobutyrate aminotransferase; Provisional.
Length = 425
Score = 143 bits (362), Expect = 1e-37
Identities = 101/375 (26%), Positives = 173/375 (46%), Gaps = 44/375 (11%)
Query: 87 EKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPS 146
+++E + ++D G++Y+D AG+ G PR++AA AQL+ F H+ +
Sbjct: 27 DRAENAEIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDR--FTHTCHQVVPYEN 84
Query: 147 -LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYH 205
+ LA+ L + K F +G+EA + VK+ A GR IA +H
Sbjct: 85 YVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIA---RAATGRS---AVIAFGGGFH 138
Query: 206 GSTLIAASLSGLPALHQK---------FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 256
G T + SL+G ++ + +P P LH G + E+ L
Sbjct: 139 GRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELH------------GVSVEQSLAAL 186
Query: 257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA 316
+ + P+ +AA I EPV G GG P PA + + ++ + ++ IL IADEV
Sbjct: 187 DKLFKADV---DPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTG 243
Query: 317 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF 376
F R G +F + + + DL + AK L+ + P+ A+ E+ + G G
Sbjct: 244 FARTGKLFAMEHHEVAADLTTMAKGLAGGF-PLAAVTGRAEIMDAPG-----PGGL--GG 295
Query: 377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILG 435
TY G+P+ A A L + +E ++ E+ N++ + + + + ++ P I +IRG G +
Sbjct: 296 TYGGNPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQRLASLRETVPEIADIRGPGFMNA 355
Query: 436 TEF--ADNKSPNEPF 448
EF AD+ P+ F
Sbjct: 356 VEFNDADSGLPSAEF 370
>gnl|CDD|233100 TIGR00713, hemL, glutamate-1-semialdehyde-2,1-aminomutase. This
enzyme, glutamate-1-semialdehyde-2,1-aminomutase
(glutamate-1-semialdehyde aminotransferase, GSA
aminotransferase), contains a pyridoxal phosphate
attached at a Lys residue at position 283 of the seed
alignment. It is in the family of class III
aminotransferases [Biosynthesis of cofactors, prosthetic
groups, and carriers, Heme, porphyrin, and cobalamin].
Length = 423
Score = 141 bits (357), Expect = 5e-37
Identities = 97/376 (25%), Positives = 168/376 (44%), Gaps = 45/376 (11%)
Query: 78 STDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS 137
S P + + +G+Y+YDV+G +Y+D + LG + PR+V A L +
Sbjct: 26 SVGPTPFFVARGKGAYLYDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALE----RGT 81
Query: 138 FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF 197
+ T+ + LAKE++ + + V F NSG+EA + V+L A G + K
Sbjct: 82 SYGAPTEAEILLAKEIISRVPS--VEMVRFVNSGTEATMSAVRL------ARGYTGRDKI 133
Query: 198 IARQKSYHGS--TLIAASLSGL--PALHQKFDLPAPFVLHT-DCPHYWRYAHPGETEEEY 252
I + YHG L+ + SG L +P F T P+
Sbjct: 134 IKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPY-------------- 179
Query: 253 STRLANNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA 310
N+LE L + +E E IA I EPV G GV+PP + ++A+ ++Y L I
Sbjct: 180 -----NDLEALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIF 234
Query: 311 DEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLG 370
DEV+ F R+ + + ++PDL + K + +P+GA E+ E + + G
Sbjct: 235 DEVMTGF-RVALGGAQEYFGVEPDLTTLGKIIGGG-LPVGAFGGRREIMERLAPE----G 288
Query: 371 SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV-KAFSDSPIIGEIRG 429
T SG+P++ A + LK+ E + +++++A + +G+ + D+ I +
Sbjct: 289 PVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNR 348
Query: 430 TGLILGTEFADNKSPN 445
G + F + + N
Sbjct: 349 VGSMFSLFFTEEEVTN 364
>gnl|CDD|180426 PRK06148, PRK06148, hypothetical protein; Provisional.
Length = 1013
Score = 145 bits (367), Expect = 6e-37
Identities = 115/428 (26%), Positives = 191/428 (44%), Gaps = 48/428 (11%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
P+ + G ++ D G+ YLD + C +G + PR+VAAA Q L N
Sbjct: 607 PIKFVRGWGVWLIDNRGRAYLDCFNNV-C-HVGHAHPRVVAAAARQAARL-------NTN 657
Query: 143 TK---PSL-DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 198
T+ ++ A+ L + FF NSGSEAN ++L + + I
Sbjct: 658 TRYLHDAIVAYAERLTATLPDG-LTVAFFVNSGSEANSLALRLARAHTGQ------RDAI 710
Query: 199 ARQKSYHGSTLIAASLSGLPALHQKFDLP-----APFVLHTDCPHYWRYAHPGETEEEYS 253
+YHG+T LS KF+ V + P +R + E+
Sbjct: 711 VLDHAYHGTTTELIDLSPY-----KFNRKGGKGRPDHVEVAEVPDSYR-GPERWPDAEHG 764
Query: 254 TRLANNLEDLI--LKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIAD 311
R A ++ + I + A FIAE + G I P Y +V A+V+ + IAD
Sbjct: 765 RRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIAD 824
Query: 312 EVICAFGRLGT-MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLG 370
EV FGR+G+ + + + PD+V+ K + + + P+GA++ + E+++ S N +
Sbjct: 825 EVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIGNGH-PMGAVVTTREIAD---SFDNGME 880
Query: 371 SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRG 429
F+ T+ G+PVSCA+ + L I ++ ++ +I G++ D IIG++RG
Sbjct: 881 YFN---TFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRG 937
Query: 430 TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIM-MSPPFIMSP 486
GL LG E ++ P I Y + G+L+ G DN++ + PP I S
Sbjct: 938 MGLFLGIELVTDRKTKAPAT---AIARYVKNGARERGILIGTEGPHDNVLKIRPPLIFSR 994
Query: 487 EEVDELIS 494
+ D L+
Sbjct: 995 ADADHLLE 1002
>gnl|CDD|180690 PRK06777, PRK06777, 4-aminobutyrate aminotransferase; Provisional.
Length = 421
Score = 138 bits (349), Expect = 5e-36
Identities = 105/359 (29%), Positives = 176/359 (49%), Gaps = 30/359 (8%)
Query: 87 EKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPS 146
E++E + ++DV G++Y+D AG+ G P++VAA QL+ F H+ + S
Sbjct: 27 ERAENATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQ--FTHTAYQIVPYAS 84
Query: 147 -LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYH 205
+ LA+ + + AK F +G+EA + VK+ Y GRP IA ++H
Sbjct: 85 YVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYT---GRPG---VIAFGGAFH 138
Query: 206 GSTLIAASLSGLPALHQKFDLPAP-FVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLI 264
G TL+ +L+G A ++ P P + H P+ G + EE A + + +
Sbjct: 139 GRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPN----ELHGVSVEE-----ALSSVERL 189
Query: 265 LKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT 322
K P+ +AA + EP+ G GG P + ++ + ++ IL IADEV F R G
Sbjct: 190 FKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGK 249
Query: 323 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 382
+F + Y +KPDL++ AK+L MPI A++ EV + + G G TY+G+P
Sbjct: 250 LFAMEYYDVKPDLITMAKSLGGG-MPISAVVGRAEVMD-----APAPGGL--GGTYAGNP 301
Query: 383 VSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV-KAFSDSPIIGEIRGTGLILGTEFAD 440
++ A A+ L + E + ++ + + + KA + P I +IR G ++ EF D
Sbjct: 302 LAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFND 360
>gnl|CDD|234607 PRK00062, PRK00062, glutamate-1-semialdehyde aminotransferase;
Provisional.
Length = 426
Score = 126 bits (320), Expect = 8e-32
Identities = 115/467 (24%), Positives = 187/467 (40%), Gaps = 122/467 (26%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTA-----LGGSEPRLVAAATAQLNT-----L 132
P IE+++G+Y+YDV+G +Y+D + + LG + P +V A
Sbjct: 33 PRFIERAKGAYLYDVDGNEYID-----YVGSWGPMILGHAHPEVVEAVIEAAEKGLSFGA 87
Query: 133 PFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRP 192
P T+ ++LA+ ++E+ + + V NSG+EA + ++L A G
Sbjct: 88 P---------TELEVELAELVIELVPS--IEMVRMVNSGTEATMSAIRL------ARGYT 130
Query: 193 NKKKFIARQKSYHG---STLIAASLSGLPALHQKFDL--PAPFVLHT-DCPHYWRYAHPG 246
+ K I + YHG S L+ A SG L P F HT P
Sbjct: 131 GRDKIIKFEGCYHGHADSLLVKAG-SGAATLGLPDSPGVPEDFAKHTLTAP--------- 180
Query: 247 ETEEEYSTRLANNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY 304
Y N+LE + + +E + IAA I EPV G GV+PP + E ++ + ++
Sbjct: 181 -----Y-----NDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEH 230
Query: 305 DILFIADEVICAFGRLGTMFGC--DKYSIKPDLVSFAKALSSAYMPIGAI--------LV 354
L I DEV+ F R+ G Y + PDL + K + +P+GA +
Sbjct: 231 GALLIFDEVMTGF-RVA--LGGAQGYYGVTPDLTTLGKIIGGG-LPVGAFGGRREIMEQL 286
Query: 355 SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDG 414
+P LG T SG+P++ A + LK+ KE E++ + + +G
Sbjct: 287 AP------------LGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEG 334
Query: 415 VK-AFSDSPIIGEIRGTGLILGTEFADNKSPN---------EPFPPEWGIGAYFGAQCEK 464
+K A + I + G + G F D N E F +F
Sbjct: 335 LKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERF------ARFF------ 382
Query: 465 HGMLVRVSGDNIMMSPP------FI---MSPEEVDELISKYGKALKA 502
H ML G + P F+ + E++++ + KA A
Sbjct: 383 HAMLDE--GVYL---APSQFEAGFVSAAHTDEDIEKTLEAARKAFAA 424
>gnl|CDD|233853 TIGR02407, ectoine_ectB, diaminobutyrate--2-oxoglutarate
aminotransferase. Members of this family of class III
pyridoxal-phosphate-dependent aminotransferases are
diaminobutyrate--2-oxoglutarate aminotransferase (EC
2.6.1.76) that catalyze the first step in ectoine
biosynthesis from L-aspartate beta-semialdehyde. This
family is readily separated phylogenetically from
enzymes with the same substrate and product but involved
in other process such as siderophore (SP|Q9Z3R2) or
1,3-diaminopropane (SP|P44951) biosynthesis. The family
TIGR00709 previously included both groups but has now
been revised to exclude the ectoine biosynthesis
proteins of this family. Ectoine is a compatible solute
particularly effective in conferring salt tolerance
[Cellular processes, Adaptations to atypical
conditions].
Length = 412
Score = 121 bits (305), Expect = 5e-30
Identities = 105/428 (24%), Positives = 181/428 (42%), Gaps = 63/428 (14%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
P V EK++GS ++D +GK+Y+D AG G + P+L A L HS
Sbjct: 18 PTVFEKAKGSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHS----- 72
Query: 143 TKPSLDLA----KELLEMFTASKMA------KVFFTN-SGSEANDTQVKLVWYYNNALGR 191
LD+A +E LE F + KV F +G+ A ++ +KL GR
Sbjct: 73 ----LDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLA---RKVTGR 125
Query: 192 PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE 251
N ++ ++HG TL + S++G Q +P V Y + +
Sbjct: 126 SN---VVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYL------GGDVD 176
Query: 252 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIAD 311
LED G + AA I E V G GG+ + ++++ + +++DIL I D
Sbjct: 177 TIAYFEKLLEDS--SSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVD 234
Query: 312 EVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS 371
++ GR GT F + I+PD+V +K++S +P+ L+ PE+ +
Sbjct: 235 DIQAGCGRTGTFFSFEPAGIEPDIVCLSKSISGYGLPLALTLIKPEL--------DVWKP 286
Query: 372 FSHGFTYSGHPVSCAVAIEALKIY-----KERNIVEQVNKIAPKFQDGVKAFSDSPIIGE 426
H T+ G+ ++ A AL+ Y E+ + + I + V + + +I +
Sbjct: 287 GEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRIVAEYPE--LIKQ 344
Query: 427 IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFI 483
+RG GL+ G E D + ++G+++ SG N I + PP
Sbjct: 345 VRGRGLMQGIECGDG-----------DLAGKIAKAAFENGLIIETSGPNDEVIKLLPPLT 393
Query: 484 MSPEEVDE 491
+ E + +
Sbjct: 394 IDEETLQQ 401
>gnl|CDD|101376 PRK04013, argD, acetylornithine/acetyl-lysine aminotransferase;
Provisional.
Length = 364
Score = 120 bits (301), Expect = 7e-30
Identities = 107/411 (26%), Positives = 178/411 (43%), Gaps = 72/411 (17%)
Query: 84 LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTT 143
L + + EG YV+D G++YLD +AG+ LG + P V + QL L +
Sbjct: 8 LRLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPMFEHEE 67
Query: 144 KPSLDLAKELLEMFTA-SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
K +E+LE + V+ NSG+EA + +K Y GR K+ IA
Sbjct: 68 K------EEMLEELSKWVNYEYVYMGNSGTEAVEAALKFARLYT---GR---KEIIAMTN 115
Query: 203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 262
++HG T+ A S + P + F+ P V PG + N++E
Sbjct: 116 AFHGRTMGALSATWKPKYREDFE---PLV-------------PGFKHIPF-----NDVE- 153
Query: 263 LILKEG-PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321
KE + AA I EP+ G GG++P + + ++ + + L IADEV R G
Sbjct: 154 -AAKEAITKETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTG 211
Query: 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 381
+ Y ++PD+V+ K + + +P+ L + +V HG T+ G+
Sbjct: 212 KFLAIEHYKVEPDIVTMGKGIGNG-VPVSLTLTNFDVER-----------GKHGSTFGGN 259
Query: 382 PVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADN 441
P++C L+I + +VE K KF + ++ RG GL++G
Sbjct: 260 PLACKAVAVTLRILRRERLVE---KAGEKFIE----IKGERVV-TTRGRGLMIGIVL--- 308
Query: 442 KSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDE 491
K P +G Y + + G LV +G ++ + PP I+S + ++E
Sbjct: 309 KKP---------VGKYV-EELQNRGYLVHTAGQRVIRLLPPLIISKDTMEE 349
>gnl|CDD|182078 PRK09792, PRK09792, 4-aminobutyrate transaminase; Provisional.
Length = 421
Score = 120 bits (302), Expect = 1e-29
Identities = 100/359 (27%), Positives = 170/359 (47%), Gaps = 28/359 (7%)
Query: 89 SEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPS-L 147
+E + + DV G +Y+D AG+ G P LVAA QL F H+ + S +
Sbjct: 29 AENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQ--FTHTAYQIVPYESYV 86
Query: 148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGS 207
LA+++ + S AK F +G+EA + VK+ + GRP IA +HG
Sbjct: 87 TLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHT---GRPG---VIAFSGGFHGR 140
Query: 208 TLIAASLSGLPALHQKFDLPAP-FVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILK 266
T + +L+G A ++ P P V H +P + + + +E L
Sbjct: 141 TYMTMALTGKVAPYKIGFGPFPGSVYHV--------PYPSDLHGISTQDSLDAIERLFKS 192
Query: 267 E-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG 325
+ + +AA I EPV G GG P ++ + ++ I+ IADEV F R G +F
Sbjct: 193 DIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFA 252
Query: 326 CDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSC 385
D Y+ KPDL++ AK+L+ MP+ ++ + + + LG TY+G+P++
Sbjct: 253 MDHYADKPDLMTMAKSLAGG-MPLSGVVGNANIMDA--PAPGGLGG-----TYAGNPLAV 304
Query: 386 AVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFADNKS 443
A A L I + ++ E+ N++ + ++ + +S P I +RG G ++ EF D ++
Sbjct: 305 AAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQT 363
>gnl|CDD|183493 PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase;
Provisional.
Length = 428
Score = 107 bits (270), Expect = 3e-25
Identities = 101/348 (29%), Positives = 160/348 (45%), Gaps = 48/348 (13%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
P+V+E+ +G+Y YDV+G KY+D LA G + P + A T Y +
Sbjct: 36 PVVMERGKGAYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYGT----P 91
Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
T+ ++ AK L E + + KV F NSG+EA T +++ Y GR KF
Sbjct: 92 TELEIEFAKMLKEAIPS--LEKVRFVNSGTEAVMTTIRVARAYT---GRTKIIKFAG--- 143
Query: 203 SYHGST---LIAASLSGLPALHQKFDLPAPFVLHT-DCPHYWRYAHPGETEEEYSTRLAN 258
YHG + L+AA SG P L T D P +E T N
Sbjct: 144 CYHGHSDLVLVAAG-SG------------PSTLGTPDSA-----GVPKSIAQEVITVPFN 185
Query: 259 NLEDL---ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 315
++E L + K G E +AA + EP++G G++ P + E V + + L I DEVI
Sbjct: 186 DIEALKEALDKWGDE-VAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVIT 244
Query: 316 AFGRLGTMFGC--DKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS 373
AF R M+G D ++PDL + K + +PIGA ++ E Q LG
Sbjct: 245 AF-RF--MYGGAQDLLGVEPDLTALGKIIGGG-LPIGAYGGRKDIME----QVAPLGPAY 296
Query: 374 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS 421
T +G+P S A I L++ ++ + E+++++ ++G+ ++
Sbjct: 297 QAGTMAGNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILEAAEK 344
>gnl|CDD|236437 PRK09264, PRK09264, diaminobutyrate--2-oxoglutarate
aminotransferase; Validated.
Length = 425
Score = 102 bits (256), Expect = 2e-23
Identities = 115/438 (26%), Positives = 192/438 (43%), Gaps = 83/438 (18%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTAL--GGSEPRLVAAATAQLNTLPFYHSFWN 140
P+V +K++GS++YD +GK+Y+D AG AL G + P L A L H
Sbjct: 22 PVVFDKAKGSWLYDEDGKEYIDFFAG--AGALNYGHNNPVLKQALIDYLQRDGITHG--- 76
Query: 141 RTTKPSLDLA----KELLEMFTASKMA------KVFFTN-SGSEANDTQVKLVWYYNNAL 189
LD+ +E LE F + + KV FT +G+ A + +KL
Sbjct: 77 ------LDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLA---RKVT 127
Query: 190 GRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETE 249
GR N +A +HG TL + +++G Q +P V P Y Y
Sbjct: 128 GRTN---IVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRM--P-YDGYFGGDVDT 181
Query: 250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFI 309
Y +L LED G + AA I E V G GG+ A + +++ + +K+DIL I
Sbjct: 182 LAYLEKL---LEDS--SSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLI 236
Query: 310 ADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTL 369
D++ GR GT F ++ I PD+V+ +K++S +P+ +L+ PE+ + N
Sbjct: 237 VDDIQAGCGRTGTFFSFERAGITPDIVTLSKSISGYGLPMALVLIKPELDVWKPGEHN-- 294
Query: 370 GSF---SHGFTYSGHPVSCAVAIE----------ALKIYKERNIVEQVNKIAPKFQDGVK 416
G+F + F V+ A+E +K K + E++ +IA K+
Sbjct: 295 GTFRGNNLAF------VTATAALEEYWSDDAFEKEVK-AKGELVRERLEEIAAKY----- 342
Query: 417 AFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN- 475
+ E+RG G++ G +F D + A+ ++G+++ SG
Sbjct: 343 ----PGLGAEVRGRGMMQGIDFGDG-----------ELAGKIAAEAFENGLIIETSGPED 387
Query: 476 --IMMSPPFIMSPEEVDE 491
+ + PP + EE++E
Sbjct: 388 EVVKLLPPLTIDEEELEE 405
>gnl|CDD|236224 PRK08297, PRK08297, L-lysine aminotransferase; Provisional.
Length = 443
Score = 102 bits (256), Expect = 2e-23
Identities = 115/464 (24%), Positives = 180/464 (38%), Gaps = 81/464 (17%)
Query: 79 TDVHPLV--IEKSEGSYVYDVN-GKKYLDSLAGLWCTALGGSEPRLVAA-------ATAQ 128
D LV +E+S+GSY+ D G++YLD +ALG + P L A
Sbjct: 21 VDGFDLVLDLERSQGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAA 80
Query: 129 LNTLPFYHSFWNRTTKPSL-DLAKELLEMF--TASKMA------KVFFTNSGSEA--NDT 177
LN KPS D+ + F T +++ +FF + G+ A N
Sbjct: 81 LN-------------KPSNSDVYTVEMARFVDTFARVLGDPELPHLFFVDGGALAVENAL 127
Query: 178 QVKLVW--YYNNALGRPNKK--KFIARQKSYHGSTLIAASLSG-LPALHQ---KFDLPAP 229
+V W N A G K + + ++HG + SL+ P KFD P
Sbjct: 128 KVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWP-- 185
Query: 230 FVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDL--ILKEGPETIAAFIAEPVIGAGGVI 287
D P R+ PGE EE A L + P IA FIAEP+ G GG
Sbjct: 186 ---RIDNPKL-RFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDN 241
Query: 288 PPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYM 347
+F ++ + ++D L I DEV G GT + + ++PD+V+F K
Sbjct: 242 HFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVAFGKK-----T 296
Query: 348 PIGAILVSPEVSEV---IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQV 404
+ I+ V EV + + S+ + S T+ G+ V A L++ +E +VE
Sbjct: 297 QVCGIMAGRRVDEVEDNVFAVSSRINS-----TWGGNLVDMVRARRILEVIEEDGLVENA 351
Query: 405 NKIAPKFQDG----VKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGA 460
+ F ++ +RG GL+ + +E
Sbjct: 352 ARQGEYLLARLEELAAEFPA--VVSNVRGRGLMCAFDLPTTADRDE-----------VIR 398
Query: 461 QCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDELISKYGKALKAT 503
+ + G+LV G+ I P ++ EE+D I +AL
Sbjct: 399 RLWEEGVLVLPCGERSIRFRPALTVTTEEIDAAIDALRRALPEV 442
>gnl|CDD|180471 PRK06209, PRK06209, glutamate-1-semialdehyde 2,1-aminomutase;
Provisional.
Length = 431
Score = 101 bits (254), Expect = 3e-23
Identities = 91/353 (25%), Positives = 144/353 (40%), Gaps = 73/353 (20%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
P I++ G++V+DV+G +Y++ GL LG + P +V A L
Sbjct: 31 PGFIQRGSGAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREAL-------QDGCNF 83
Query: 143 TKPS---LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYN--NALGRPNKKKF 197
T+PS LD A+ LE+ + M K F +GS+A V+L Y + + R F
Sbjct: 84 TRPSAIELDAAESFLELIDGADMVK--FCKNGSDATSAAVRLARAYTGRDLVARCADHPF 141
Query: 198 IARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257
+ + G+T ++A G+PA L F RY
Sbjct: 142 FSTDDWFIGTTPMSA---GIPASVS--ALTVTF----------RY--------------- 171
Query: 258 NNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 315
N++ L + ++ P IA I EP P + +V+ + + LFI DE+I
Sbjct: 172 NDIASLEALFEDHPGRIACVILEPATAD----EPQDGFLHEVRRLCHENGALFILDEMIT 227
Query: 316 AFGRLGTMFGCDKYSIKPDLVSFAKALS-----SA------YMPIGAILVSPEVSEVIHS 364
F R Y I PDL F KAL SA YM +G + + E +
Sbjct: 228 GF-RWHMRGAQKLYGIVPDLSCFGKALGNGFAVSALAGKREYMELGGLEHTDR--ERVFL 284
Query: 365 QSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA 417
S T G+ +H A AI + IY++ +++E++++ K GV
Sbjct: 285 LSTTHGAETHAL---------AAAIATMAIYRDEDVIERLHEQGAKLAAGVNE 328
>gnl|CDD|132295 TIGR03251, LAT_fam, L-lysine 6-transaminase. Characterized members
of this protein family are L-lysine 6-transaminase, also
called lysine epsilon-aminotransferase (LAT). The
immediate product of the reaction of this enzyme on
lysine, 2-aminoadipate 6-semialdehyde, becomes
1-piperideine 6-carboxylate, or P6C. This product may be
converted subsequently to pipecolate or
alpha-aminoadipate, lysine catabolites that may be
precursors of certain seconary metabolites.
Length = 431
Score = 92.9 bits (231), Expect = 3e-20
Identities = 107/457 (23%), Positives = 174/457 (38%), Gaps = 75/457 (16%)
Query: 79 TDVHPLV--IEKSEGSYVYDVN-GKKYLDSLAGLWCTALGGSEPRLV--AAATAQLNTLP 133
TD LV +++S GS + D G++YLD + ALG + P LV A A+L
Sbjct: 14 TDGFDLVLDLDRSRGSVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAA 73
Query: 134 FYHSFWNRTTKPS-LDLAKELLEMFTAS--------KMAKVFFTNSGSEA--NDTQVKLV 182
KPS D+ + F + + +FF G+ A N +
Sbjct: 74 V--------NKPSNSDVYTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFD 125
Query: 183 W--YYNNALGRPNKK--KFIARQKSYHGSTLIAASLSGL----PALHQKFDLPAPFVLHT 234
W +N A G P + + ++++HG + SL+ A KFD P
Sbjct: 126 WKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWP-----RI 180
Query: 235 DCPHYWRYAHPGETEEEYSTRLANNLEDL-----ILKEGPETIAAFIAEPVIGAGGVIPP 289
D P +A E L E P IA FIAEP+ G GG
Sbjct: 181 DNP----KLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHF 236
Query: 290 PATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPI 349
+ ++A+ ++D L I DEV G GT + + ++PD+V+F K +
Sbjct: 237 RPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFGKKTQ-----V 291
Query: 350 GAILVSPEVSEV---IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVE---- 402
I+ V EV + + + L S T+ G+ V A L+I +E +V+
Sbjct: 292 CGIMAGRRVDEVADNVFAVPSRLNS-----TWGGNLVDMVRATRILEIIEEERLVDNARV 346
Query: 403 QVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC 462
Q + + + F ++ RG GL+ + +E I +
Sbjct: 347 QGAHLLARLHELAAEFPH--LVSNPRGRGLMCAFDLPSTADRDEV------IRQLY---- 394
Query: 463 EKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKA 499
+ +L+ +I PP ++ EE+D I +
Sbjct: 395 REGVLLLGCGERSIRFRPPLTVTREEIDAAIDAIRRV 431
>gnl|CDD|178100 PLN02482, PLN02482, glutamate-1-semialdehyde 2,1-aminomutase.
Length = 474
Score = 92.9 bits (231), Expect = 4e-20
Identities = 96/343 (27%), Positives = 152/343 (44%), Gaps = 50/343 (14%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTA-LGGSEPRLVAAATAQLNTLPFYHSFWNR 141
P+V ++ +GSY +DV+G +Y+D + G W A +G ++ ++AA + SF
Sbjct: 82 PIVFDRVKGSYAWDVDGNEYIDYV-GSWGPAIIGHADDEVLAALAETMKK---GTSF--- 134
Query: 142 TTKPSLDLAKELLEMFTAS--KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIA 199
P L L L EM + + V F NSG+EA ++L Y ++K I
Sbjct: 135 -GAPCL-LENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAYTG------REKIIK 186
Query: 200 RQKSYHG---STLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 256
+ YHG S L+ A SG+ L LP D P P T
Sbjct: 187 FEGCYHGHADSFLVKAG-SGVATL----GLP-------DSP-----GVPKAATSATLTAP 229
Query: 257 ANNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVI 314
N+LE + + + IAA I EPV+G G I P + E ++ + K+ L + DEV+
Sbjct: 230 YNDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVM 289
Query: 315 CAFGRLGTMFGC--DKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF 372
F R+ +G + + I PDL + K + +P+GA E+ E++ G
Sbjct: 290 TGF-RIA--YGGAQEYFGITPDLTTLGKVIGGG-LPVGAYGGRREIMEMVAPA----GPM 341
Query: 373 SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV 415
T SG+P++ I LK ++ E ++KI K G+
Sbjct: 342 YQAGTLSGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGI 384
>gnl|CDD|215526 PLN02974, PLN02974, adenosylmethionine-8-amino-7-oxononanoate
transaminase.
Length = 817
Score = 92.1 bits (229), Expect = 1e-19
Identities = 92/366 (25%), Positives = 142/366 (38%), Gaps = 81/366 (22%)
Query: 145 PSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVW--YY-------NNALGRPNKK 195
P+L A+ LL ++VFF+++GS A + +K+ + + N+ +
Sbjct: 410 PALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGD 469
Query: 196 ----KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY------------ 239
K +A SYHG TL A + P+ F P Y
Sbjct: 470 LIELKVLALDGSYHGDTLGA----------MEAQAPSVFTGFLQQPWYSGRGLFLDPPTV 519
Query: 240 ------WRYAHP----GETEEEY---------------STRLANNLEDLILKE------- 267
W + P E E ST LA I ++
Sbjct: 520 GMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEAS 579
Query: 268 -GPETIAAFIAEPVI-GAGG--VIPPPATYFEKV-QAVVKKYDILFIADEVICAFGRLGT 322
IAA I EPV+ GAGG +I P F++ V + I I DEV RLG
Sbjct: 580 AKNGHIAALIIEPVLHGAGGMLLIDP---LFQRALVQVCRSRKIPVIFDEVFTGLWRLGV 636
Query: 323 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 382
+ KPD+ +AK L+ +P+ A L + EV E S HG +Y+ HP
Sbjct: 637 ESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALL-HGHSYTAHP 695
Query: 383 VSCAVAIEALKIYKE----RNIVEQVNKIAPKF-QDGVKAFSDSPIIGEIRGTGLILGTE 437
+ CA A +AL+ YK+ N++ +++ + ++ V+A S P + + G +L E
Sbjct: 696 MGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALE 755
Query: 438 FADNKS 443
S
Sbjct: 756 LDAEGS 761
>gnl|CDD|129782 TIGR00699, GABAtrns_euk, 4-aminobutyrate aminotransferase,
eukaryotic type. This enzyme is a class III
pyridoxal-phosphate-dependent aminotransferase. This
model describes known eukaryotic examples of the enzyme.
The degree of sequence difference between this set and
known bacterial examples is greater than the distance
between either set the most similar enzyme with distinct
function, and so separate models are built for
prokaryotic and eukaryotic sets. Alternate names include
GABA transaminase, gamma-amino-N-butyrate transaminase,
and beta-alanine--oxoglutarate aminotransferase [Central
intermediary metabolism, Other].
Length = 464
Score = 88.3 bits (219), Expect = 1e-18
Identities = 80/296 (27%), Positives = 130/296 (43%), Gaps = 50/296 (16%)
Query: 87 EKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTK-- 144
EKS G+Y+ DV+G + LD + + +G + P L+ AA + + NR
Sbjct: 45 EKSRGNYLVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMA----TTLINRPALGN 100
Query: 145 -PSLDLAKELLE--MFTASK-MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIAR 200
PS D AK L E + A K +V+ SGS+AN+ K + Y + R + F
Sbjct: 101 FPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEE 160
Query: 201 Q---------------------KSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH- 238
+ ++HG + S + +H K D+PA D P
Sbjct: 161 ENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIH-KLDIPA-----FDWPQA 214
Query: 239 -YWRYAHPGE------TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPA 291
+ +P E +EE R +EDLI K+ + +AA I EP+ GG
Sbjct: 215 PFPSLKYPLEEHVKENAKEE--QRCLEEVEDLI-KKWHKPVAAIIVEPIQSEGGDNHASP 271
Query: 292 TYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK--PDLVSFAKALSSA 345
+F K++ + KK+++ FI DEV G G + + +++ PD+V+F+K +A
Sbjct: 272 DFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFSKKFQTA 327
>gnl|CDD|234803 PRK00615, PRK00615, glutamate-1-semialdehyde aminotransferase;
Provisional.
Length = 433
Score = 77.9 bits (192), Expect = 2e-15
Identities = 82/361 (22%), Positives = 141/361 (39%), Gaps = 49/361 (13%)
Query: 78 STDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAA--ATAQLNTLPF 134
S + P ++ + G D GK ++D G W + + G S P++ A A+ T
Sbjct: 31 SVGITPPIVSSASGDIFIDSLGKTFID-FCGSWGSLIHGHSHPKICDAIQQGAERGT--- 86
Query: 135 YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK 194
+ T++ + A+EL K+ F +SG+EA T V+L GR
Sbjct: 87 ---SYGLTSEQEILFAEELFSYLGLEDH-KIRFVSSGTEATMTAVRLA---RGITGRSII 139
Query: 195 KKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254
KF+ YHG L G+ D ++ TD H + P
Sbjct: 140 IKFLG---CYHGHADTL--LQGISFSETSLD-TLTHLVDTDLAHPLTLSLP--------- 184
Query: 255 RLANNL---EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIAD 311
N+ + ++ G +A I EP+ GV+ P + E + ++ L I D
Sbjct: 185 --YNDFQIFQTVMNSLGHR-VAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMD 241
Query: 312 EVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS 371
EV+ F R+ Y +KPD+ + K L +P A++ + + + G+
Sbjct: 242 EVVTGF-RVAQGGAAAIYHVKPDITVYGKILGGG-LPAAAVVAHKSIMDHLAP----EGT 295
Query: 372 FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTG 431
T SG+P++ A ++ + +E+ Q++ + F SPI IR G
Sbjct: 296 IFQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFL--------SPIEEMIRSQG 347
Query: 432 L 432
Sbjct: 348 F 348
>gnl|CDD|235917 PRK07046, PRK07046, aminotransferase; Validated.
Length = 453
Score = 50.0 bits (120), Expect = 2e-06
Identities = 78/337 (23%), Positives = 133/337 (39%), Gaps = 86/337 (25%)
Query: 83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCT----ALGGSEPRLVAAATAQ-----LNT-L 132
PL + ++ G+ DV+G +Y D +C A+ G P VA A A+ L T L
Sbjct: 58 PLFVAEARGARFTDVDGHRYDD-----FCLGDTGAMFGHSPAPVARALAEQARRGLTTML 112
Query: 133 PFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNAL-GR 191
P ++ + + +EL F + + ++AN + V + A+ GR
Sbjct: 113 P---------SEDAAWVGEELARRF---GLPYWQVATTATDAN----RFVLRWARAVTGR 156
Query: 192 PNKKKFIARQKSYHGS---TLI------AASLSGLPALHQKFDLPAPFVLHTDCPHYWRY 242
P K + YHG+ + GL L Q DL A
Sbjct: 157 P---KILVFNGCYHGTVDDVFVDLVDGRPVQRPGL--LGQVHDLTA-------------- 197
Query: 243 AHPGETEEEYSTRLA--NNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 298
+TR+ N+L L L +G +AA +AEP + G++ P + E ++
Sbjct: 198 ----------TTRVVEFNDLAALEAALADG--DVAAVLAEPAMTNIGMVLPEPGFHEALR 245
Query: 299 AVVKKYDILFIADE--VICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSP 356
+ ++Y L + DE I + G G + ++PD + K ++ +P S
Sbjct: 246 ELTRRYGTLLVIDETHTISS-GPGGY---TRAHGLEPDFLVVGKPIAGG-VPCAVYGFSA 300
Query: 357 EVSEVIHS--QSNTLGSFSHGFTYSGHPVSCAVAIEA 391
E++E + S G G T S + ++ A A+ A
Sbjct: 301 ELAERAQAAKASAPPGHSGIGTTLSANALAMA-AMRA 336
>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II.
Length = 357
Score = 43.1 bits (102), Expect = 2e-04
Identities = 36/147 (24%), Positives = 55/147 (37%), Gaps = 27/147 (18%)
Query: 258 NNLEDLI--LKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 315
+ + L LKE E + G + EK+ + K+++IL + DE
Sbjct: 127 LDFDALEAALKEATEGNKVVLHTSPHNPTGTVATLEEL-EKLLDLAKEHNILLLVDE--- 182
Query: 316 AFGRLGTMFG-CDKYSIKPDL---------VSFAKALSSAYMPIGAILVSPEVSEVIHSQ 365
A+ G +FG D + + L SF+KA A +G IL + V
Sbjct: 183 AYA--GFVFGSLDAVATRALLAEGPNLLVVGSFSKAFGLAGWRVGYILGNAAV------- 233
Query: 366 SNTLGSFSHGFTYSGHPVSCAVAIEAL 392
+ L + F S H A A AL
Sbjct: 234 ISQLRKLARPFYSSTH--LQAAAAAAL 258
>gnl|CDD|99742 cd01494, AAT_I, Aspartate aminotransferase (AAT) superfamily (fold
type I) of pyridoxal phosphate (PLP)-dependent enzymes.
PLP combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine intermediate, which
depending on the reaction, is the substrate in four
kinds of reactions (1) transamination (movement of amino
groups), (2) racemization (redistribution of
enantiomers), (3) decarboxylation (removing COOH
groups), and (4) various side-chain reactions depending
on the enzyme involved. Pyridoxal phosphate (PLP)
dependent enzymes were previously classified into alpha,
beta and gamma classes, based on the chemical
characteristics (carbon atom involved) of the reaction
they catalyzed. The availability of several structures
allowed a comprehensive analysis of the evolutionary
classification of PLP dependent enzymes, and it was
found that the functional classification did not always
agree with the evolutionary history of these enzymes.
Structure and sequence analysis has revealed that the
PLP dependent enzymes can be classified into four major
groups of different evolutionary origin: aspartate
aminotransferase superfamily (fold type I), tryptophan
synthase beta superfamily (fold type II), alanine
racemase superfamily (fold type III), and D-amino acid
superfamily (fold type IV) and Glycogen phophorylase
family (fold type V).
Length = 170
Score = 40.4 bits (95), Expect = 6e-04
Identities = 41/212 (19%), Positives = 68/212 (32%), Gaps = 51/212 (24%)
Query: 148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGS 207
+L ++L + K F SG+ AN+ + AL P + I +
Sbjct: 4 ELEEKLARLLQPG-NDKAVFVPSGTGANEAALL-------ALLGP-GDEVIVDANGHGSR 54
Query: 208 TLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE 267
+AA L+G P P + G LE+L +
Sbjct: 55 YWVAAELAGAK--------PVPVP-------VDDAGYGGLDVAI--------LEEL---K 88
Query: 268 GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCD 327
+A + P +GGV+ P +++ + K+Y IL + D
Sbjct: 89 AKPNVALIVITPNTTSGGVLVPLK----EIRKIAKEYGILLLVDAASAGGAS-----PAP 139
Query: 328 KYSI---KPDLV--SFAKALSSAYMPIGAILV 354
I D+V S K L G ++V
Sbjct: 140 GVLIPEGGADVVTFSLHKNL--GGEGGGVVIV 169
>gnl|CDD|99734 cd00609, AAT_like, Aspartate aminotransferase family. This family
belongs to pyridoxal phosphate (PLP)-dependent aspartate
aminotransferase superfamily (fold I). Pyridoxal
phosphate combines with an alpha-amino acid to form a
compound called a Schiff base or aldimine intermediate,
which depending on the reaction, is the substrate in
four kinds of reactions (1) transamination (movement of
amino groups), (2) racemization (redistribution of
enantiomers), (3) decarboxylation (removing COOH
groups), and (4) various side-chain reactions depending
on the enzyme involved. Pyridoxal phosphate (PLP)
dependent enzymes were previously classified into alpha,
beta and gamma classes, based on the chemical
characteristics (carbon atom involved) of the reaction
they catalyzed. The availability of several structures
allowed a comprehensive analysis of the evolutionary
classification of PLP dependent enzymes, and it was
found that the functional classification did not always
agree with the evolutionary history of these enzymes.
The major groups in this CD corresponds to Aspartate
aminotransferase a, b and c, Tyrosine, Alanine,
Aromatic-amino-acid, Glutamine phenylpyruvate,
1-Aminocyclopropane-1-carboxylate synthase,
Histidinol-phosphate, gene products of malY and cobC,
Valine-pyruvate aminotransferase and Rhizopine
catabolism regulatory protein.
Length = 350
Score = 34.6 bits (80), Expect = 0.11
Identities = 38/223 (17%), Positives = 72/223 (32%), Gaps = 37/223 (16%)
Query: 285 GVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV----SFAK 340
G + E++ + KK+ IL I+DE G + V SF+K
Sbjct: 146 GAVLSEEE-LEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSK 204
Query: 341 ALSSAYMP---IGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE 397
+P IG ++ PE E++ +T SG A A E
Sbjct: 205 TFG---LPGLRIGYLIAPPE--ELLERLKKL-----LPYTTSGPSTLSQAAAAAALDDGE 254
Query: 398 RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTG--LILGTEFADNKSPNEPFPPEWGIG 455
++ E + + ++A + + ++ +G + + D P
Sbjct: 255 EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFL----WLD-------LPEGDDEE 303
Query: 456 AYFGAQCEKHGMLVRVSGDNIMMSPPFI-----MSPEEVDELI 493
+ G++VR F+ EE++E +
Sbjct: 304 FLE-RLLLEAGVVVRPGSAFGEGGEGFVRLSFATPEEELEEAL 345
>gnl|CDD|216634 pfam01661, Macro, Macro domain. This domain is an ADP-ribose
binding module. It is found in a number of otherwise
unrelated proteins. It is found at the C-terminus of the
macro-H2A histone protein. This domain is found in the
non-structural proteins of several types of ssRNA
viruses such as NSP3 from alphaviruses. This domain is
also found on its own in a family of proteins from
bacteria, archaebacteria, and eukaryotes.
Length = 117
Score = 32.2 bits (74), Expect = 0.16
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 12/64 (18%)
Query: 224 FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN---NLEDLILKEGPETIAAFIAEPV 280
+LPA +V+H P + H G EEE LA+ N +L + G ++IA P+
Sbjct: 50 GNLPAKYVIHAVGP---IWRHGGGEEEEEL--LASAYRNALELANELGIKSIAF----PL 100
Query: 281 IGAG 284
I G
Sbjct: 101 ISTG 104
>gnl|CDD|173322 PTZ00023, PTZ00023, glyceraldehyde-3-phosphate dehydrogenase;
Provisional.
Length = 337
Score = 31.7 bits (72), Expect = 0.83
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 157 FTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK 194
F K + +F +G NDT VKLV +Y+N G N+
Sbjct: 288 FVHDKRSSIFDVKAGIALNDTFVKLVSWYDNEWGYSNR 325
>gnl|CDD|220540 pfam10050, DUF2284, Predicted metal-binding protein (DUF2284).
Members of this family of metal-binding hypothetical
bacterial proteins have no known function.
Length = 166
Score = 30.8 bits (70), Expect = 0.89
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 477 MMSPPFIMSPEEVDELISKYGKAL 500
PP++ P+E E++ +Y KAL
Sbjct: 31 WSCPPYVPDPDEFREILREYKKAL 54
>gnl|CDD|180537 PRK06348, PRK06348, aspartate aminotransferase; Provisional.
Length = 384
Score = 31.6 bits (72), Expect = 0.90
Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 21/158 (13%)
Query: 247 ETEEEYSTRL-ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD 305
ET EE ++ LE LI +T A + P G V E++ + +YD
Sbjct: 141 ETYEEDGFQINVKKLEALI---TSKTKAIILNSPNNPTGAVFSKET--LEEIAKIAIEYD 195
Query: 306 ILFIADEVICAFG------RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVS 359
+ I+DEV F + T+ G + +I SF+K + IG ++ +P+
Sbjct: 196 LFIISDEVYDGFSFYEDFVPMATLAGMPERTIT--FGSFSKDFAMTGWRIGYVI-APDY- 251
Query: 360 EVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE 397
+I T + G +S +S AI ALK
Sbjct: 252 -II----ETAKIINEGICFSAPTISQRAAIYALKHRDT 284
>gnl|CDD|239233 cd02905, Macro_GDAP2_like, Macro domain, GDAP2_like family. The
macro domain is a high-affinity ADP-ribose binding
module found in a variety of proteins as a stand-alone
domain or in combination with other domains like in
histone macroH2A and some PARPs (poly ADP-ribose
polymerases). Some macro domains recognize poly
ADP-ribose as a ligand. Previously identified as
displaying an Appr-1"-p (ADP-ribose-1"-monophosphate)
processing activity, the macro domain may play roles in
distinct ADP-ribose pathways, such as the
ADP-ribosylation of proteins, an important
post-translational modification which occurs in DNA
repair, transcription, chromatin biology, and long-term
memory formation, among other processes. This family
contains proteins similar to human GDAP2, the
ganglioside induced differentiation associated protein
2, whose gene is expressed at a higher level in
differentiated Neuro2a cells compared with
non-differentiated cells. GDAP2 contains an N-terminal
macro domain and a C-terminal Sec14p-like lipid binding
domain. It is specifically expressed in brain and
testis.
Length = 140
Score = 30.4 bits (69), Expect = 1.2
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 224 FDLPAPFVLHTDCPHY 239
++LPA F++HT P Y
Sbjct: 65 YNLPARFIIHTVGPKY 80
>gnl|CDD|216814 pfam01965, DJ-1_PfpI, DJ-1/PfpI family. The family includes the
protease PfpI. This domain is also found in
transcriptional regulators. This N-terminal region of
the full-length AdpA proteins is necessary for
dimerisation of the molecule.
Length = 142
Score = 30.0 bits (68), Expect = 1.4
Identities = 20/77 (25%), Positives = 25/77 (32%), Gaps = 15/77 (19%)
Query: 278 EPVIGAGGV--IPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL 335
+ V G G + T + V A YD L I G G + L
Sbjct: 11 KEVKGKNGKVKVRADKT-LDDVNA--DDYDALVIP----------GGHAGAEDLRDDEKL 57
Query: 336 VSFAKALSSAYMPIGAI 352
V F K + PI AI
Sbjct: 58 VKFVKEFYESGKPIAAI 74
>gnl|CDD|173415 PTZ00124, PTZ00124, adenosine deaminase; Provisional.
Length = 362
Score = 31.0 bits (70), Expect = 1.7
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPI 423
GH + A + E + + KE++I+ +V I+ + K+ PI
Sbjct: 251 GHGIRVAESQELIDMVKEKDILLEVCPISNVLLNNAKSMDTHPI 294
>gnl|CDD|99744 cd06451, AGAT_like, Alanine-glyoxylate aminotransferase (AGAT)
family. This family belongs to pyridoxal phosphate
(PLP)-dependent aspartate aminotransferase superfamily
(fold I). The major groups in this CD correspond to
alanine-glyoxylate aminotransferase (AGAT),
serine-glyoxylate aminotransferase (SGAT), and
3-hydroxykynurenine transaminase (HKT). AGAT is a
homodimeric protein, which catalyses the transamination
of glyoxylate to glycine, and SGAT converts serine and
glyoxylate to hydroxypyruvate and glycine. HKT catalyzes
the PLP-dependent transamination of 3-hydroxykynurenine,
a potentially toxic metabolite of the kynurenine
pathway.
Length = 356
Score = 30.7 bits (70), Expect = 1.7
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 21/115 (18%)
Query: 269 PETIAAFIAEPVIGA---------GGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319
PE IA + + I A GV+ P E + A+ KK+D L I D V + G
Sbjct: 113 PEEIAEALEQHDIKAVTLTHNETSTGVLNP----LEGIGALAKKHDALLIVDAV-SSLG- 166
Query: 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMP--IGAILVSPEVSEVIHSQSNTLGSF 372
G F D++ + KAL + P +G I S E I ++ G +
Sbjct: 167 -GEPFRMDEWGVDVAYTGSQKALGA---PPGLGPIAFSERALERIKKKTKPKGFY 217
>gnl|CDD|235865 PRK06814, PRK06814, acylglycerophosphoethanolamine acyltransferase;
Provisional.
Length = 1140
Score = 31.1 bits (71), Expect = 1.8
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Query: 306 ILFIADEVICAFGRLGTMFGCDKYSIKPD 334
+LF A + G +FG KYSI PD
Sbjct: 110 LLFAA---LFLMGIHSALFGPIKYSILPD 135
>gnl|CDD|225697 COG3155, ElbB, Uncharacterized protein involved in an early stage
of isoprenoid biosynthesis [Secondary metabolites
biosynthesis, transport, and catabolism].
Length = 217
Score = 30.2 bits (68), Expect = 1.9
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 10/64 (15%)
Query: 298 QAVVKKYDIL-----FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAI 352
QA ++ D L F A + + F G + S+ PDL + A+A+ A P+G +
Sbjct: 80 QADAEELDALIVPGGFGAAKNLSDFASKGA-----ECSVDPDLKALAQAMHQAGKPLGFM 134
Query: 353 LVSP 356
++P
Sbjct: 135 CIAP 138
>gnl|CDD|222007 pfam13249, Prenyltrans_2, Prenyltransferase-like.
Length = 112
Score = 28.9 bits (65), Expect = 2.1
Identities = 16/65 (24%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Query: 345 AYMPIGAILVSPEVSEVIHSQSNTLGSF-SHGFTYSGHPVSCAVAIEALKIYKERNIVEQ 403
A +G + + SQ N G F + S S A A+ AL++ E
Sbjct: 33 ALAALGETPDVKKALAWLLSQQNPDGGFGYDPQSNSPDLSSTAYALAALELLGGEPDDEA 92
Query: 404 VNKIA 408
V K
Sbjct: 93 VEKAV 97
Score = 27.7 bits (62), Expect = 5.6
Identities = 10/43 (23%), Positives = 16/43 (37%)
Query: 362 IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQV 404
+ SQ N G + A+A+ AL E V++
Sbjct: 4 LLSQQNPDGGWGAAVGGGSDVAMTALALLALAALGETPDVKKA 46
>gnl|CDD|218162 pfam04591, DUF596, Protein of unknown function, DUF596. This
family contains several uncharacterized proteins.
Length = 69
Score = 27.7 bits (62), Expect = 2.8
Identities = 10/38 (26%), Positives = 15/38 (39%)
Query: 215 SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY 252
PA ++ D T+CP + GE E+Y
Sbjct: 28 KSFPASDEEMDPDFGIWFFTECPAGAVWVFKGENGEDY 65
>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional.
Length = 880
Score = 30.4 bits (69), Expect = 3.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 482 FIMSPEEVDELISKYGKALKATEERVKELKS 512
FI E ++ELI + K L+ + E+ S
Sbjct: 184 FIKRTENIEELIKEKEKELEEVLREINEISS 214
>gnl|CDD|184898 PRK14905, PRK14905, triosephosphate isomerase/PTS system
glucose/sucrose-specific transporter subunit IIB;
Provisional.
Length = 355
Score = 29.6 bits (66), Expect = 3.6
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 10/67 (14%)
Query: 246 GETEEEYSTRLANNLEDLILKEGPETIAA------FIA-EPV--IGAGGVIPPPATYFEK 296
GET E+ + +++ + LK G ++A FIA EPV IG GG IP A Y ++
Sbjct: 136 GETLEQKNYNISDEVLRTQLKIGLHGVSAEQLPHLFIAYEPVWAIGEGG-IPASAEYADE 194
Query: 297 VQAVVKK 303
A++K+
Sbjct: 195 KHAIIKQ 201
>gnl|CDD|236771 PRK10829, PRK10829, ribonuclease D; Provisional.
Length = 373
Score = 29.6 bits (67), Expect = 4.0
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 14/56 (25%)
Query: 348 PIGAILVSPEVSEVIHSQSNTLGSFSHGF--------------TYSGHPVSCAVAI 389
P A+L P+V++ +H+ S L F + F + G P+SC A
Sbjct: 65 PFKALLRDPQVTKFLHAGSEDLEVFLNAFGELPQPLIDTQILAAFCGRPLSCGFAS 120
>gnl|CDD|179559 PRK03321, PRK03321, putative aminotransferase; Provisional.
Length = 352
Score = 29.5 bits (67), Expect = 4.8
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 458 FGAQCEKHGMLVR-VSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERVKEL 510
F A + G++VR +G+ + ++ I +PEE D L+A L
Sbjct: 309 FAAAAAEAGVVVRPFAGEGVRVT---IGAPEENDAF-------LRAARAWRAGL 352
>gnl|CDD|234609 PRK00068, PRK00068, hypothetical protein; Validated.
Length = 970
Score = 29.6 bits (67), Expect = 5.1
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 393 KIYKERNIVEQVNKIAP 409
KI R+ ++V K+AP
Sbjct: 562 KILFNRDPRDRVEKVAP 578
>gnl|CDD|131967 TIGR02921, PEP_integral, PEP-CTERM family integral membrane
protein. Members of this protein family, found in three
different species so far, have a PEP-CTERM sequence at
the carboxyl-terminus (see model TIGR02595), but are
unusual among PEP-CTERM proteins in having multiple
predicted transmembrane segments. The function is
unknown. It is proposed that a member of the EpsH
family, to be designated exosortase (see TIGR02602),
recognizes and cleaves PEP-CTERM proteins in a manner
analogous to the cleavage of LPXTG proteins by sortase
(see Haft, et al., 2006).
Length = 952
Score = 29.2 bits (65), Expect = 6.2
Identities = 22/93 (23%), Positives = 31/93 (33%), Gaps = 14/93 (15%)
Query: 28 SASKSLSENLYQI-PLLARFYGTDASSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVI 86
A + +NL Q P FYG + MLA F +++
Sbjct: 687 GADPTRLDNLQQFQPEKVAFYGD---ILPME----------MLAAFNNLKGDQAYDAVLL 733
Query: 87 EKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEP 119
GSY + N K +A LW LG +
Sbjct: 734 LSDAGSYELEKNFKLKAAQMAPLWLVHLGETLA 766
>gnl|CDD|223694 COG0621, MiaB, 2-methylthioadenine synthetase [Translation,
ribosomal structure and biogenesis].
Length = 437
Score = 29.1 bits (66), Expect = 6.2
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 10/60 (16%)
Query: 244 HPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK 303
PGETEE++ DL+ + + + F P G P A ++V VKK
Sbjct: 306 FPGETEEDF-----EETLDLVEEVRFDRLHVFKYSPRPGT-----PAALMPDQVPEEVKK 355
>gnl|CDD|214894 smart00897, FIST, FIST N domain. The FIST N domain is a novel
sensory domain, which is present in signal transduction
proteins from Bacteria, Archaea and Eukarya. Chromosomal
proximity of FIST-encoding genes to those coding for
proteins involved in amino acid metabolism and transport
suggest that FIST domains bind small ligands, such as
amino acids.
Length = 196
Score = 28.4 bits (64), Expect = 6.7
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 72 FTAGWQSTDVHPLVIEKSEGSYVYDVNGK 100
T GW+ P V+ K+EG+ VY+++G+
Sbjct: 169 VTQGWRPIG-PPFVVTKAEGNVVYELDGE 196
>gnl|CDD|236499 PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component;
Reviewed.
Length = 924
Score = 28.9 bits (66), Expect = 8.0
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 483 IMSPEEVDELISKYGKALKATEERVKELKSQQ 514
+++ EE DE++++Y AL A E VKE +
Sbjct: 489 VITEEEADEMVNEYRDALDAGFEVVKEWRPAD 520
>gnl|CDD|185323 PRK15425, gapA, glyceraldehyde-3-phosphate dehydrogenase A;
Provisional.
Length = 331
Score = 28.5 bits (63), Expect = 8.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Query: 157 FTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK 194
F VF +G ND VKLV +Y+N G NK
Sbjct: 284 FNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNK 321
>gnl|CDD|233544 TIGR01717, AMP-nucleosdse, AMP nucleosidase. This model represents
the AMP nucleosidase from proteobacteria but also
including a sequence from Corynebacterium, a
gram-positive organism. The species from E. coli has
been most well studied.
Length = 477
Score = 28.7 bits (64), Expect = 8.4
Identities = 31/144 (21%), Positives = 51/144 (35%), Gaps = 33/144 (22%)
Query: 11 LLQSSLKSQIGSFTKHFSASKSLSENLYQIPL-------------------LARFYGTDA 51
L +S L Q+ + + S+ + ++IP LAR++ T
Sbjct: 82 LFRSYLNEQLTLLYQDYGVHISVQPSQHEIPYPYVIGAGSELEADRAGSAGLARYFPTTD 141
Query: 52 SSQKEDSTTNG----FKGHDM-LAPFTAGWQSTDVHPLVIEKSEGS-------YVYDVNG 99
+Q D +G G + LA F A Q D + G+ +V N
Sbjct: 142 LAQIGDEIADGDYIYHPGEFLPLAHFDA--QRVDFSLARLRHYTGTPVEHFQPFVLFTNY 199
Query: 100 KKYLDSLAGLWCTALGGSEPRLVA 123
+Y+D C+ L + R VA
Sbjct: 200 TRYVDEFVRWGCSQLLDPDSRYVA 223
>gnl|CDD|218390 pfam05028, PARG_cat, Poly (ADP-ribose) glycohydrolase (PARG).
Poly(ADP-ribose) glycohydrolase (PARG), is a
ubiquitously expressed exo- and endoglycohydrolase which
mediates oxidative and excitotoxic neuronal death.
Length = 339
Score = 28.4 bits (64), Expect = 8.9
Identities = 29/133 (21%), Positives = 47/133 (35%), Gaps = 46/133 (34%)
Query: 357 EVSEVIHSQ--SNTLGSFSHGFTYSGHPV------------SCAVAIEALKI-------Y 395
E ++ ++ S+ G + F ++G V + VAI+AL Y
Sbjct: 205 EAIIIVGAERFSSYTG-YGSSFRFAGDYVDKTPRDSFGRRNTRIVAIDALHFGDPYDKQY 263
Query: 396 KERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIG 455
K+ +I+ ++NK F K+ P I TG WG G
Sbjct: 264 KQESILRELNKAFCGFLSPSKSSRPLPGI----ATGN-------------------WGCG 300
Query: 456 AYFGAQCEKHGML 468
A FG E ++
Sbjct: 301 A-FGGDPELKFLI 312
>gnl|CDD|240464 cd12884, SPRY_hnRNP, SPRY domain in heterogeneous nuclear
ribonucleoprotein U-like (hnRNP) protein 1. This
domain, consisting of the distinct N-terminal PRY
subdomain followed by the SPRY subdomain, is found at
the C-terminus of heterogeneous nuclear
ribonucleoprotein U-like (hnRNP) protein 1 (also known
as HNRPUL1 ) which is a major constituent of nuclear
matrix or scaffold and binds directly to DNA sequences
through the N-terminal acidic region named serum amyloid
P (SAP). Its function is specifically modulated by
E1B-55kDa in adenovirus-infected cells. HNRPUL1 also
participates in ATR protein kinase signaling pathways
during adenovirus infection. Two transcript variants
encoding different isoforms have been found for this
gene. When associated with bromodomain-containing
protein 7 (BRD7), it activates transcription of
glucocorticoid-responsive promoter in the absence of
ligand-stimulation.
Length = 176
Score = 27.9 bits (63), Expect = 8.9
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 75 GWQSTDVHPLVIEKSEGSYVYDVNGKKYLDS 105
GW S D L + + + SY Y GKK +
Sbjct: 75 GW-SVDSSSLQLGEEKLSYGYGSTGKKSTNG 104
>gnl|CDD|236980 PRK11780, PRK11780, isoprenoid biosynthesis protein with
amidotransferase-like domain; Provisional.
Length = 217
Score = 28.2 bits (64), Expect = 9.6
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 330 SIKPDLVSFAKALSSAYMPIGAILVSP 356
++ PD+ + +A A PIG I ++P
Sbjct: 112 TVNPDVKALVRAFHQAGKPIGFICIAP 138
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.317 0.133 0.393
Gapped
Lambda K H
0.267 0.0728 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 26,268,519
Number of extensions: 2589028
Number of successful extensions: 3264
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2906
Number of HSP's successfully gapped: 143
Length of query: 514
Length of database: 10,937,602
Length adjustment: 101
Effective length of query: 413
Effective length of database: 6,457,848
Effective search space: 2667091224
Effective search space used: 2667091224
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (27.3 bits)