Query 010251
Match_columns 514
No_of_seqs 222 out of 2050
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 23:10:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010251.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010251hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qdm_A Prophytepsin; aspartic 100.0 8.2E-87 2.8E-91 711.5 42.2 476 31-514 1-478 (478)
2 3psg_A Pepsinogen; hydrolase(a 100.0 1.1E-71 3.9E-76 577.7 36.5 367 30-514 1-370 (370)
3 2x0b_A Renin; hydrolase-hormon 100.0 6.7E-71 2.3E-75 573.6 36.7 374 28-514 6-383 (383)
4 1tzs_A Cathepsin E; hydrolase, 100.0 1.7E-64 5.9E-69 520.7 35.8 331 76-514 12-342 (351)
5 3k1w_A Renin; protease, altern 100.0 2.6E-64 8.9E-69 517.1 35.8 332 75-514 6-340 (341)
6 3cms_A Chymosin B; hydrolase, 100.0 4.6E-64 1.6E-68 511.7 37.2 321 76-514 3-323 (323)
7 1dpj_A Proteinase A; proteinas 100.0 6.4E-64 2.2E-68 512.0 38.2 326 77-514 3-329 (329)
8 4aa9_A Chymosin; hydrolase, as 100.0 4.1E-64 1.4E-68 511.3 34.2 319 78-514 2-320 (320)
9 1htr_B Gastricsin; aspartyl pr 100.0 8.9E-64 3E-68 510.9 34.0 325 78-514 4-329 (329)
10 1am5_A Pepsin, acid proteinase 100.0 1.3E-63 4.5E-68 508.6 34.2 322 78-514 3-324 (324)
11 1miq_A Plasmepsin; aspartic pr 100.0 6.9E-63 2.4E-67 512.7 34.9 321 75-514 50-374 (375)
12 3qvc_A Histo-aspartic protease 100.0 1.6E-62 5.5E-67 519.8 35.6 321 75-514 125-449 (451)
13 2bju_A Plasmepsin II; aspartic 100.0 5.2E-62 1.8E-66 515.4 35.0 322 75-514 126-450 (453)
14 1yg9_A Aspartic protease BLA G 100.0 2E-61 6.8E-66 493.7 32.9 318 76-514 6-329 (330)
15 1mpp_A Pepsin; hydrolase(acid 100.0 2.2E-61 7.6E-66 499.3 32.1 326 75-514 6-355 (361)
16 2apr_A Rhizopuspepsin; hydrola 100.0 4.6E-59 1.6E-63 475.3 37.9 311 83-514 11-324 (325)
17 3c9x_A Trichoderma reesei aspa 100.0 8.8E-59 3E-63 474.0 36.4 313 83-513 11-329 (329)
18 1oew_A Endothiapepsin; hydrola 100.0 1.2E-58 4.2E-63 472.9 34.8 311 84-513 12-329 (329)
19 3fv3_A SAPP1P-secreted asparti 100.0 1.2E-57 4.1E-62 467.3 34.8 313 77-514 3-329 (339)
20 1j71_A Candidapepsin, aspartic 100.0 1.4E-57 4.8E-62 466.0 34.9 309 77-514 3-324 (334)
21 1ibq_A Aspergillopepsin; aspar 100.0 3.5E-57 1.2E-61 461.4 37.2 309 85-514 12-325 (325)
22 2qzx_A Candidapepsin-5; aspart 100.0 2.1E-57 7.3E-62 466.1 35.9 314 77-514 3-331 (342)
23 1izd_A Aspartic proteinase; su 100.0 2.8E-57 9.4E-62 461.7 34.8 306 85-514 13-323 (323)
24 1bxo_A Protein (penicillopepsi 100.0 2.9E-57 9.9E-62 461.6 30.6 306 85-514 13-323 (323)
25 3pvk_A Candidapepsin-2; hydrol 100.0 8.3E-57 2.8E-61 461.5 34.2 315 77-514 3-331 (342)
26 1wkr_A Polyporopepsin; hydrola 100.0 1.7E-56 5.8E-61 459.1 34.3 312 77-514 3-333 (340)
27 3lpj_A Beta-secretase 1; alzhe 100.0 7.8E-56 2.7E-60 471.4 28.9 325 80-514 67-420 (455)
28 2ewy_A Beta-secretase 2; BACE2 100.0 1.2E-54 4.1E-59 452.3 32.4 324 80-514 6-355 (383)
29 3vf3_A Beta-secretase 1; struc 100.0 2.2E-54 7.6E-59 453.2 30.4 323 81-514 22-374 (402)
30 2qp8_A Beta-secretase 1; BACE1 100.0 4.7E-54 1.6E-58 449.7 32.0 323 80-514 14-367 (395)
31 3aup_A SBG7S, BG, basic 7S glo 100.0 2.8E-53 9.5E-58 445.0 27.4 324 77-514 10-387 (403)
32 3vla_A EDGP; extracellular, in 100.0 1E-52 3.5E-57 441.2 26.4 327 76-513 8-398 (413)
33 1t6e_X Xylanase inhibitor; two 100.0 1.9E-49 6.4E-54 412.9 22.3 324 78-514 4-373 (381)
34 1b5f_A Protein (cardosin A); h 100.0 2.3E-48 8E-53 379.2 27.4 237 77-317 3-239 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 9.6E-45 3.3E-49 354.0 27.6 241 168-514 1-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 1.8E-23 6.3E-28 174.1 10.9 93 77-169 3-96 (97)
37 1b5f_B Protein (cardosin A); h 99.8 4.9E-21 1.7E-25 156.3 9.2 87 427-514 1-87 (87)
38 3rfi_A Asp; PSI, saposin, hydr 99.6 2.3E-16 7.8E-21 133.5 4.0 106 316-423 3-108 (108)
39 2qyp_A Proactivator polypeptid 97.2 0.00013 4.5E-09 59.0 2.2 49 383-434 3-51 (91)
40 4ddj_A Saposin-A, protein A; s 97.2 0.0002 6.7E-09 56.9 3.1 41 385-425 3-43 (83)
41 3bqp_A Proactivator polypeptid 97.1 0.00019 6.4E-09 56.4 2.5 47 385-434 2-48 (80)
42 1of9_A Pore-forming peptide am 96.5 0.0011 3.8E-08 51.7 2.7 40 385-425 2-41 (77)
43 2gtg_A Proactivator polypeptid 96.4 0.0017 5.8E-08 51.3 3.2 41 384-424 3-43 (83)
44 1l9l_A Granulysin; saposin fol 96.4 0.0015 5E-08 50.6 2.6 38 386-424 2-39 (74)
45 1nkl_A NK-lysin; saposin fold, 96.0 0.0025 8.5E-08 49.8 1.8 39 386-424 2-40 (78)
46 1n69_A Saposin B; lipid bindin 95.9 0.0039 1.3E-07 49.1 2.9 40 385-424 3-43 (81)
47 2js9_A Saposin-like protein fa 95.0 0.0021 7.3E-08 52.6 -1.8 53 382-436 18-70 (99)
48 2i1a_A DNA damage-inducible pr 92.9 0.15 5.2E-06 44.4 6.0 91 85-200 23-115 (148)
49 2i1a_A DNA damage-inducible pr 91.7 0.41 1.4E-05 41.6 7.2 26 486-511 109-134 (148)
50 2qyp_A Proactivator polypeptid 91.5 0.17 5.9E-06 40.3 4.2 39 320-358 46-84 (91)
51 3s8i_A Protein DDI1 homolog 1; 89.9 0.5 1.7E-05 41.3 6.0 90 87-200 23-114 (148)
52 3bqp_A Proactivator polypeptid 89.6 0.26 8.8E-06 37.9 3.5 37 320-356 43-79 (80)
53 1nkl_A NK-lysin; saposin fold, 89.5 0.13 4.5E-06 39.8 1.7 37 320-356 41-77 (78)
54 1of9_A Pore-forming peptide am 88.5 0.13 4.5E-06 39.7 1.1 36 320-355 42-77 (77)
55 2gtg_A Proactivator polypeptid 88.0 0.19 6.4E-06 39.2 1.7 37 320-356 45-81 (83)
56 3s8i_A Protein DDI1 homolog 1; 85.9 1.2 4.1E-05 38.9 5.9 26 486-511 108-133 (148)
57 2js9_A Saposin-like protein fa 85.9 0.23 8E-06 40.4 1.2 36 320-355 63-98 (99)
58 4ddj_A Saposin-A, protein A; s 82.8 0.46 1.6E-05 36.9 1.6 36 321-356 46-82 (83)
59 1n69_A Saposin B; lipid bindin 82.7 0.44 1.5E-05 37.0 1.5 36 320-356 45-80 (81)
60 1l9l_A Granulysin; saposin fol 82.0 0.62 2.1E-05 35.6 2.0 33 320-352 41-73 (74)
61 3vcm_P Prorenin; aspartic prot 76.8 2 6.9E-05 28.9 3.1 24 29-52 7-30 (43)
62 2hs1_A HIV-1 protease; ultra-h 75.5 3.5 0.00012 33.3 4.7 29 90-120 10-38 (99)
63 1fmb_A EIAV protease; hydrolas 75.0 2.9 9.9E-05 34.1 4.2 26 89-116 9-34 (104)
64 3ec0_A Protease; HIV-2, inhibi 69.0 5.8 0.0002 32.0 4.6 29 90-120 10-38 (99)
65 3liy_A Protease; hydrolase, hy 66.5 4.8 0.00016 33.3 3.6 32 90-121 12-46 (116)
66 2hah_A Protease, retropepsin; 60.8 7.7 0.00026 32.2 3.9 26 90-118 16-41 (116)
67 3sqf_A Protease; folded monome 54.7 13 0.00043 30.8 4.2 29 90-120 11-39 (114)
68 1htr_P Progastricsin (Pro segm 54.2 5.6 0.00019 26.1 1.7 23 30-52 2-24 (43)
69 1tzs_P Activation peptide from 53.5 5 0.00017 24.9 1.3 23 29-51 2-24 (35)
70 3slz_A GAG-Pro-POL polyprotein 47.3 21 0.00073 30.2 4.6 30 88-119 22-51 (132)
71 3ka2_A [L-Ala51;Gly51']HIV-1 p 40.1 24 0.00081 32.3 4.0 28 89-118 9-36 (203)
72 2rsp_A RSV protease; hydrolase 38.4 29 0.00099 29.1 4.0 24 95-120 27-50 (124)
73 3s64_A AC-SLP-1, saposin-like 36.7 13 0.00044 29.2 1.4 41 315-355 47-87 (87)
74 1bxo_A Protein (penicillopepsi 31.2 51 0.0017 31.9 5.2 42 254-305 3-44 (323)
75 1ibq_A Aspergillopepsin; aspar 29.6 54 0.0018 31.7 5.0 41 255-305 3-43 (325)
76 1izd_A Aspartic proteinase; su 28.4 61 0.0021 31.4 5.2 41 255-305 4-44 (323)
77 3s64_A AC-SLP-1, saposin-like 28.3 10 0.00035 29.8 -0.5 37 384-422 9-45 (87)
78 1mpp_A Pepsin; hydrolase(acid 22.2 50 0.0017 32.4 3.2 44 254-305 4-49 (361)
79 1b5f_A Protein (cardosin A); h 21.9 94 0.0032 28.5 4.9 38 78-117 181-226 (239)
80 1oew_A Endothiapepsin; hydrola 21.3 61 0.0021 31.4 3.6 43 255-305 3-46 (329)
81 3aup_A SBG7S, BG, basic 7S glo 21.0 77 0.0026 31.7 4.4 42 77-118 218-276 (403)
82 3c9x_A Trichoderma reesei aspa 20.1 67 0.0023 31.1 3.6 43 255-305 3-46 (329)
No 1
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=8.2e-87 Score=711.46 Aligned_cols=476 Identities=70% Similarity=1.241 Sum_probs=400.4
Q ss_pred EEEeeeeeccchhhhhccCcccchhh-cccccccccccCCCCC-CCCcceEeceeccCceEEEEEEEcCCCceEEEEecC
Q 010251 31 VRIGLRKKKLDQINRLVGQTVSKEEE-TMRTPVRRYNLHGSLG-DSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDT 108 (514)
Q Consensus 31 ~ripL~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~-~~~~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDT 108 (514)
+||||+|+++.++.+.+.+....... +++ ++. ... .++...+||.|+.+.+|+++|+||||||+|+|+|||
T Consensus 1 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DT 73 (478)
T 1qdm_A 1 VRIALKKRPIDRNSRVATGLSGGEEQPLLS----GAN---PLRSEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDT 73 (478)
T ss_dssp CEEEEEECCCCHHHHHHHHTC-----------------------CCSSCSGGGCCGGGCCEEEEEEETTTTEEEEEEEET
T ss_pred CeeeeeeccchHHHHHhcchhhhhHHHHHh----hcc---cccCcCCCceEEeEeccCCEEEEEEEECCCCeEEEEEEcC
Confidence 48999999999988877654322111 221 110 011 123567999999999999999999999999999999
Q ss_pred CCCceeeeCCCCCCCcccccCCcccCCCCCceeecCeEEEEEeccceEEEEEEEEEEEECCEEecceeEEEEEecccccc
Q 010251 109 GSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITF 188 (514)
Q Consensus 109 GSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~~G~~~~D~v~igg~~v~~~~fg~~~~~~~~~~ 188 (514)
||+++||+|..|..+..|..|+.|+|++|+||+..++.|.+.|++|++.|.+++|+|++++..++++.||++....+..|
T Consensus 74 GSs~lWV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~f 153 (478)
T 1qdm_A 74 GSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITF 153 (478)
T ss_dssp TCCCCEEEBTTCCSCGGGGGSCCBCGGGCTTCBCCCCEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCBSHH
T ss_pred CCcceEEecCCCCCCccccCCCCCCcccCCCeeeCCcEEEEEcCCCCeEEEEEEEEEEECCeEECCEEEEEEEecCCccc
Confidence 99999999999964568999999999999999999999999999999999999999999999999999999998766556
Q ss_pred cccccceEEeecccccccCCCCchHHHHHHcCCCCCCEEEEEecCCCCCCCCcEEEECCcCCCCcccceEEEecccCCce
Q 010251 189 LAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYW 268 (514)
Q Consensus 189 ~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGg~D~s~~~g~l~~~pl~~~~~w 268 (514)
....++||||||++..+.....|++++|++||.|++++||+||.+..+...+|+|+|||+|+++|.|+++|+|+...++|
T Consensus 154 ~~~~~dGIlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w 233 (478)
T 1qdm_A 154 LVAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYW 233 (478)
T ss_dssp HHCSSSEEEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTE
T ss_pred ccccccceecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeE
Confidence 66788999999999988777889999999999999999999998864334589999999999999999999999988999
Q ss_pred EEEEceEEECCeeecccCCCceEEEcCCCCCcccCHHHHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccc
Q 010251 269 QFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKI 348 (514)
Q Consensus 269 ~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~ 348 (514)
.|.+++|.|+++.+.++..++.+||||||+++++|++++++|.+++++.+.....|+..+.+||..++++++++.+|.++
T Consensus 234 ~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~v 313 (478)
T 1qdm_A 234 QFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKI 313 (478)
T ss_dssp EEEECCEEETTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHH
T ss_pred EEEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhh
Confidence 99999999999987767778999999999999999999999999999998888999999999999999999999999999
Q ss_pred cccCcccccCCCCcccccceeeeccCCCCCCCCCCCcccchhhhHHHHHHHHHHhhchhhHHHHhhhhccccCCCCCCCC
Q 010251 349 CSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGE 428 (514)
Q Consensus 349 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 428 (514)
|.++++|.+++.++.++++++|++++..+++. ..++.+|.+|+|++.|+|+.|+.|.|+++|+++++++|+.++...|.
T Consensus 314 C~~iglC~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~ 392 (478)
T 1qdm_A 314 CSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNG-LRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGE 392 (478)
T ss_dssp HHHTTCC----------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSC
T ss_pred hccccccccCcccccccccccccccccccccc-ccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCe
Confidence 99999999999999999999999988665543 46789999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCCCCcEEEEECCEEEEeCcCcceEEeccCccceeEeeeEecccCCCCCCeeEecHhhhcceEEEEECCCCeE
Q 010251 429 SAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSI 508 (514)
Q Consensus 429 ~~~~C~~~~~~P~l~f~fgg~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rI 508 (514)
|.++|+.+..+|+|+|+|||+.|+|+|++|+++..++....|+++|+..+++++.++.||||++|||++|++||++++||
T Consensus 393 ~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rI 472 (478)
T 1qdm_A 393 SAVDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRI 472 (478)
T ss_dssp CEECGGGGTTCCCEEEEETTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEE
T ss_pred EEeecccccccccEEEEECCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEE
Confidence 99999988899999999999999999999999876554568999999888766667899999999999999999999999
Q ss_pred EEEecC
Q 010251 509 GFAEAA 514 (514)
Q Consensus 509 Gfa~a~ 514 (514)
|||+|+
T Consensus 473 GfA~a~ 478 (478)
T 1qdm_A 473 GFAKAA 478 (478)
T ss_dssp EEEEEC
T ss_pred EEEeCC
Confidence 999986
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=1.1e-71 Score=577.73 Aligned_cols=367 Identities=42% Similarity=0.772 Sum_probs=322.8
Q ss_pred eEEEeeeeeccchhhhhccCcccchhhcccccccccccCCCCCCC---CcceEeceeccCceEEEEEEEcCCCceEEEEe
Q 010251 30 LVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDS---DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIF 106 (514)
Q Consensus 30 ~~ripL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~l 106 (514)
++||||+|.++.|+.+.+.+..++ +|+. |+++++.+.... ....+||.|+.|.+|+++|+||||||+|+|+|
T Consensus 1 ~~~ipl~~~~s~r~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~ 75 (370)
T 3psg_A 1 LVKVPLVRKKSLRQNLIKDGKLKD---FLKT--HKHNPASKYFPEAAALIGDEPLENYLDTEYFGTIGIGTPAQDFTVIF 75 (370)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHH---HHHH--CCCCGGGGTCTTSCCSSCCCTTGGGTTCCEEEEEEETTTTEEEEEEE
T ss_pred CEEEEeEEcCcHHHHHHhcCcHHH---HHhh--hhcchhhhhccccccccceecceeccCCEEEEEEEEcCCCCEEEEEE
Confidence 479999999999999988887665 4442 233322221111 34678999999999999999999999999999
Q ss_pred cCCCCceeeeCCCCCCCcccccCCcccCCCCCceeecCeEEEEEeccceEEEEEEEEEEEECCEEecceeEEEEEecccc
Q 010251 107 DTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASI 186 (514)
Q Consensus 107 DTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~~G~~~~D~v~igg~~v~~~~fg~~~~~~~~ 186 (514)
||||+++||+|..|. +..|..++.|++++|+||+..++.|.+.|++|++.|.+++|+|++++..++++.||++....+.
T Consensus 76 DTGSs~lWV~s~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~ 154 (370)
T 3psg_A 76 DTGSSNLWVPSVYCS-SLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGS 154 (370)
T ss_dssp ETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCG
T ss_pred eCCCCccEEECCCCC-CcccCCCCCCCCccCcCcEECCcEEEEEeCCceEEEEEEEEEEeeCCcccCCeEEEEEEeeccc
Confidence 999999999999996 6689999999999999999999999999999999999999999999999999999999987666
Q ss_pred cccccccceEEeecccccccCCCCchHHHHHHcCCCCCCEEEEEecCCCCCCCCcEEEECCcCCCCcccceEEEecccCC
Q 010251 187 TFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKG 266 (514)
Q Consensus 187 ~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGg~D~s~~~g~l~~~pl~~~~ 266 (514)
.|....++||||||++..+.....|++++|++||.|++++||+||.+.. ..+|+|+|||+|+++|.|+++|+|+.+.+
T Consensus 155 ~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~--~~~G~l~fGg~D~~~y~g~l~~~pv~~~~ 232 (370)
T 3psg_A 155 FLYYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSND--DSGSVVLLGGIDSSYYTGSLNWVPVSVEG 232 (370)
T ss_dssp GGGGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-------CEEEEETCCCGGGBSSCCEEEECSEET
T ss_pred ccccCCccceeccCCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCC--CCCeEEEEEeeChHhcCCcceeecccccc
Confidence 6777789999999999998888889999999999999999999999862 34899999999999999999999999999
Q ss_pred ceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHHHHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcc
Q 010251 267 YWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQ 346 (514)
Q Consensus 267 ~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~ 346 (514)
+|.|.+++|.|+++.+. +..++.|+|||||+++++|++++++|.+++++.
T Consensus 233 ~w~v~l~~i~v~g~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~----------------------------- 282 (370)
T 3psg_A 233 YWQITLDSITMDGETIA-CSGGCQAIVDTGTSLLTGPTSAIANIQSDIGAS----------------------------- 282 (370)
T ss_dssp TEEEEECEEESSSSEEE-CTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCE-----------------------------
T ss_pred eeEEEEeEEEECCEEEe-cCCCceEEEcCCCCcEECCHHHHHHHHHHhCCc-----------------------------
Confidence 99999999999998775 567899999999999999999999999999765
Q ss_pred cccccCcccccCCCCcccccceeeeccCCCCCCCCCCCcccchhhhHHHHHHHHHHhhchhhHHHHhhhhccccCCCCCC
Q 010251 347 KICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPN 426 (514)
Q Consensus 347 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 426 (514)
+...
T Consensus 283 ----------------------------------------------------------------------------~~~~ 286 (370)
T 3psg_A 283 ----------------------------------------------------------------------------ENSD 286 (370)
T ss_dssp ----------------------------------------------------------------------------ECTT
T ss_pred ----------------------------------------------------------------------------ccCC
Confidence 0135
Q ss_pred CCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceEEeccCccceeEeeeEecccCCCCCCeeEecHhhhcceEEEEECCCC
Q 010251 427 GESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNL 506 (514)
Q Consensus 427 ~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~ 506 (514)
|.|.++|+....+|+|+|+|+|++++|++++|+++ .. +.|+++|+..+.+++.++.||||++|||++|+|||++++
T Consensus 287 g~~~v~C~~~~~lP~i~f~~~g~~~~l~~~~yi~~-~~---~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~ 362 (370)
T 3psg_A 287 GEMVISCSSIDSLPDIVFTIDGVQYPLSPSAYILQ-DD---DSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANN 362 (370)
T ss_dssp CCEECCGGGGGGCCCEEEEETTEEEEECHHHHEEE-CS---SCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTT
T ss_pred CcEEEECCCcccCCcEEEEECCEEEEECHHHhccc-CC---CEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCC
Confidence 67999999888899999999999999999999998 22 469999998876555566899999999999999999999
Q ss_pred eEEEEecC
Q 010251 507 SIGFAEAA 514 (514)
Q Consensus 507 rIGfa~a~ 514 (514)
|||||+|+
T Consensus 363 riGfA~a~ 370 (370)
T 3psg_A 363 KVGLAPVA 370 (370)
T ss_dssp EEEEEEBC
T ss_pred EEEEEEcC
Confidence 99999996
No 3
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=6.7e-71 Score=573.65 Aligned_cols=374 Identities=40% Similarity=0.732 Sum_probs=299.8
Q ss_pred CceEEEeeeeeccchhhhhccCc-ccchhhcccccccccccCCCCCCCCcceEeceeccCceEEEEEEEcCCCceEEEEe
Q 010251 28 DGLVRIGLRKKKLDQINRLVGQT-VSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIF 106 (514)
Q Consensus 28 ~~~~ripL~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~l 106 (514)
++++||||+|+++.++.+.+.+. ..+ +++.+...++...+ ......+||.|+.+.+|+++|+||||||+|+|+|
T Consensus 6 ~~~~~i~l~k~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~ 80 (383)
T 2x0b_A 6 TTFKRIFLKRMPSIRESLKERGVDMAR---LGPEWSQPMKRLTL--GNTTSSVILTNYMDTQYYGEIGIGTPPQTFKVVF 80 (383)
T ss_dssp --------------------------------------------------CEEEEEEETTTEEEEEEEETTTTEEEEEEE
T ss_pred CcEEEEEEEECCcHHHHHHHhCchHHH---HHHhhccccccccc--cCCcceEeeeecCCCEEEEEEEECCCCcEEEEEE
Confidence 34789999999988888777665 322 33211100011000 0124569999999999999999999999999999
Q ss_pred cCCCCceeeeCCCCCC-CcccccCCcccCCCCCceeecCeEEEEEeccceEEEEEEEEEEEECCEEecceeEEEEEeccc
Q 010251 107 DTGSSNLWVPSAKCYF-SVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEAS 185 (514)
Q Consensus 107 DTGSs~~WV~~~~C~~-~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~~G~~~~D~v~igg~~v~~~~fg~~~~~~~ 185 (514)
||||+++||+|..|.. ...|..|+.|++++|+||+..++.|.++|++|+++|.+++|+|++++..++ +.||++....+
T Consensus 81 DTGSs~lWV~s~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~g 159 (383)
T 2x0b_A 81 DTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITVT-QMFGEVTEMPA 159 (383)
T ss_dssp ETTCCCEEEEBTTSCTTSHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEEEEEEEEEEEETTEEEE-EEEEEEEECCH
T ss_pred eCCCCCeEEeccCCCCCcccccCCCCCCCCCCCcEEECCcEEEEEcCCccEEEEEEeeEEEEcCceEE-EEEEEEEecCC
Confidence 9999999999999952 358999999999999999999999999999999999999999999999999 99999998776
Q ss_pred ccccccccceEEeecccccccCCCCchHHHHHHcCCCCCCEEEEEecCCCCCC--CCcEEEECCcCCCCcccceEEEecc
Q 010251 186 ITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGE--EGGEIVFGGVDPDHYKGEHTYVPVT 263 (514)
Q Consensus 186 ~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~--~~G~L~fGg~D~s~~~g~l~~~pl~ 263 (514)
..|....++||||||++..+.....|++++|++||.|++++||+||++..... .+|+|+|||+|+++|.|+++|+|+.
T Consensus 160 ~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~ 239 (383)
T 2x0b_A 160 LPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI 239 (383)
T ss_dssp HHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBS
T ss_pred cccccCCCceEeccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcC
Confidence 66667789999999999998878889999999999999999999998863221 3899999999999999999999999
Q ss_pred cCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHHHHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhcc
Q 010251 264 KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAET 343 (514)
Q Consensus 264 ~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~ 343 (514)
+.++|.|.+++|.|+++.+. +..++.||+||||+++++|.+++++|.+++++.
T Consensus 240 ~~~~w~v~l~~i~v~~~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~-------------------------- 292 (383)
T 2x0b_A 240 KTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLMEALGAK-------------------------- 292 (383)
T ss_dssp STTSCEEEECEEEESSCCCB-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCE--------------------------
T ss_pred CCceEEEEEeEEEeCCceEE-cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCc--------------------------
Confidence 99999999999999998753 667899999999999999999999999999765
Q ss_pred CcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCcccchhhhHHHHHHHHHHhhchhhHHHHhhhhccccCCC
Q 010251 344 QPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLP 423 (514)
Q Consensus 344 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~ 423 (514)
+
T Consensus 293 -------------------------------------------------------------------------------~ 293 (383)
T 2x0b_A 293 -------------------------------------------------------------------------------K 293 (383)
T ss_dssp -------------------------------------------------------------------------------E
T ss_pred -------------------------------------------------------------------------------c
Confidence 1
Q ss_pred CCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceEEeccCccceeEeeeEecccCCCCCCeeEecHhhhcceEEEEEC
Q 010251 424 SPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDY 503 (514)
Q Consensus 424 ~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~ 503 (514)
..|.|.++|+....+|+|+|+|+|++|+|+|++|+++....+...|+++|+..+.+++.++.||||++|||++|+|||+
T Consensus 294 -~~g~~~v~C~~~~~~P~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~ 372 (383)
T 2x0b_A 294 -RLFDYVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDR 372 (383)
T ss_dssp -CSSCEEEEGGGTTTCCCEEEEETTEEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEET
T ss_pred -cCCcEEEeccccccCceEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEEC
Confidence 2467899999888999999999999999999999998654444689999998876655667999999999999999999
Q ss_pred CCCeEEEEecC
Q 010251 504 GNLSIGFAEAA 514 (514)
Q Consensus 504 ~~~rIGfa~a~ 514 (514)
+++|||||+|+
T Consensus 373 ~~~rIGfA~a~ 383 (383)
T 2x0b_A 373 RNNRIGFALAR 383 (383)
T ss_dssp TTTEEEEEEEC
T ss_pred CCCEEeEEEcC
Confidence 99999999986
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.7e-64 Score=520.69 Aligned_cols=331 Identities=48% Similarity=0.885 Sum_probs=293.5
Q ss_pred cceEeceeccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCcccccCCcccCCCCCceeecCeEEEEEeccce
Q 010251 76 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA 155 (514)
Q Consensus 76 ~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs 155 (514)
...+||.|+.+.+|+++|+||||||+++|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 12 ~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 90 (351)
T 1tzs_A 12 SAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCT-SPACKTHSRFQPSQSSTYSQPGQSFSIQYGTGS 90 (351)
T ss_dssp --CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCBCCSCEEEEESSSCE
T ss_pred ccceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-ccccCCCCcCCcccCcceEECCCEEEEEeCCCC
Confidence 4458999999999999999999999999999999999999999996 468999999999999999999999999999999
Q ss_pred EEEEEEEEEEEECCEEecceeEEEEEecccccccccccceEEeecccccccCCCCchHHHHHHcCCCCCCEEEEEecCCC
Q 010251 156 ISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDI 235 (514)
Q Consensus 156 ~~G~~~~D~v~igg~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~ 235 (514)
+.|.+++|+|++++..++++.||++....+..|....++||||||++..+.....+++++|++||.|.+++||+||.+..
T Consensus 91 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~ 170 (351)
T 1tzs_A 91 LSGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNP 170 (351)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC
T ss_pred eEEEEEEeEEEECCeEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCCC
Confidence 99999999999999999999999998876655666788999999999888777889999999999999999999998864
Q ss_pred CCCCCcEEEECCcCCCCcccceEEEecccCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHHHHHHHHHHhc
Q 010251 236 EGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIG 315 (514)
Q Consensus 236 ~~~~~G~L~fGg~D~s~~~g~l~~~pl~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~~~~~l~~~i~ 315 (514)
.....|+|+|||+|+++|.|+++|+|+...++|.|.+++|.|+++.+. +..+..++|||||+++++|.+++++|.++++
T Consensus 171 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~ 249 (351)
T 1tzs_A 171 EGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMF-CSEGCQAIVDTGTSLITGPSDKIKQLQNAIG 249 (351)
T ss_dssp --CTTCEEEETSCCGGGBCSCCEEEECSEETTEEEEEEEEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHHHHHT
T ss_pred CCCCCCEEEECCCCHHHcCCceEEEecCCCceEEEEeCEEEECCceEE-cCCCceEEeccCCcceeCCHHHHHHHHHHhC
Confidence 333479999999999999999999999988999999999999998753 5577899999999999999999999999987
Q ss_pred cCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCcccchhhhHHH
Q 010251 316 ASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAV 395 (514)
Q Consensus 316 ~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (514)
+..
T Consensus 250 ~~~----------------------------------------------------------------------------- 252 (351)
T 1tzs_A 250 AAP----------------------------------------------------------------------------- 252 (351)
T ss_dssp CEE-----------------------------------------------------------------------------
T ss_pred Ccc-----------------------------------------------------------------------------
Confidence 650
Q ss_pred HHHHHHHhhchhhHHHHhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceEEeccCccceeEeeeE
Q 010251 396 IWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFT 475 (514)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~y~~~~~~~~~~~C~~~~~ 475 (514)
.. +.|.++|+....+|+|+|+|+|++++|++++|+++....+...|+++|+
T Consensus 253 ----------------------------~~-g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~yi~~~~~~~~~~C~~~~~ 303 (351)
T 1tzs_A 253 ----------------------------VD-GEYAVECANLNVMPDVTFTINGVPYTLSPTAYTLLDFVDGMQFCSSGFQ 303 (351)
T ss_dssp ----------------------------CS-SSEEECGGGGGGSCCEEEEETTEEEEECTTTSEECC-----CCEEESEE
T ss_pred ----------------------------cC-CeEEEeCCCCccCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEE
Confidence 11 5688999987789999999999999999999999765433468999998
Q ss_pred ecccCCCCCCeeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 476 AFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 476 ~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
..+.+.+.++.||||++|||++|++||++++|||||+++
T Consensus 304 ~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~ 342 (351)
T 1tzs_A 304 GLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAV 342 (351)
T ss_dssp ECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred ECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECC
Confidence 876554455789999999999999999999999999985
No 5
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=2.6e-64 Score=517.10 Aligned_cols=332 Identities=43% Similarity=0.836 Sum_probs=297.8
Q ss_pred CcceEeceeccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCC-CcccccCCcccCCCCCceeecCeEEEEEecc
Q 010251 75 DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYF-SVSCYFHSKYKSSHSSTYKRNGTSAAIQYGT 153 (514)
Q Consensus 75 ~~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~-~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~ 153 (514)
+...+||.|+.|.+|+++|+||||||+++|++||||+++||+|..|.. ...|..++.|+|++|+||+..++.|.+.|++
T Consensus 6 ~~~~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~ 85 (341)
T 3k1w_A 6 TTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYST 85 (341)
T ss_dssp BCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEEETT
T ss_pred CCccccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeECCCEEEEEECC
Confidence 566899999999999999999999999999999999999999999952 3479889999999999999999999999999
Q ss_pred ceEEEEEEEEEEEECCEEecceeEEEEEecccccccccccceEEeecccccccCCCCchHHHHHHcCCCCCCEEEEEecC
Q 010251 154 GAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNR 233 (514)
Q Consensus 154 gs~~G~~~~D~v~igg~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~ 233 (514)
|++.|.+++|+|+|++..+ ++.||++....+..|....++||||||++..+.....|++++|++||.|.+++||+||.+
T Consensus 86 gs~~G~~~~D~v~ig~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~ 164 (341)
T 3k1w_A 86 GTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNR 164 (341)
T ss_dssp EEEEEEEEEEEEEETTEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECC
T ss_pred cEEEEEEEEEEEEECCcee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEeC
Confidence 9999999999999999999 999999998766546667789999999998887778899999999999999999999998
Q ss_pred CC--CCCCCcEEEECCcCCCCcccceEEEecccCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHHHHHHHH
Q 010251 234 DI--EGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQIN 311 (514)
Q Consensus 234 ~~--~~~~~G~L~fGg~D~s~~~g~l~~~pl~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~~~~~l~ 311 (514)
.. .....|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.+++..+. +..+..++|||||+++++|++++++|+
T Consensus 165 ~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~ 243 (341)
T 3k1w_A 165 DSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLM 243 (341)
T ss_dssp CC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHH
T ss_pred CCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEECCEEee-cCCCCEEEEECCCChhcCCHHHHHHHH
Confidence 64 123489999999999999999999999999999999999999998753 456789999999999999999999999
Q ss_pred HHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCcccchhh
Q 010251 312 HAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSAC 391 (514)
Q Consensus 312 ~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (514)
+++++..
T Consensus 244 ~~~~~~~------------------------------------------------------------------------- 250 (341)
T 3k1w_A 244 EALGAKK------------------------------------------------------------------------- 250 (341)
T ss_dssp HHHTCEE-------------------------------------------------------------------------
T ss_pred HHcCCee-------------------------------------------------------------------------
Confidence 9997650
Q ss_pred hHHHHHHHHHHhhchhhHHHHhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceEEeccCccceeE
Q 010251 392 EMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCI 471 (514)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~y~~~~~~~~~~~C~ 471 (514)
...| |.++|+....+|+|+|+|+|++++|+|++|+++........|+
T Consensus 251 --------------------------------~~~g-~~~~C~~~~~~p~i~f~f~g~~~~l~~~~~~~~~~~~~~~~C~ 297 (341)
T 3k1w_A 251 --------------------------------RLFD-YVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCT 297 (341)
T ss_dssp --------------------------------CSSC-EEEEGGGGGGCCCEEEEETTEEEEECHHHHBCCSCCCTTSEEE
T ss_pred --------------------------------cCCC-eEEeCCCCCcCCcEEEEECCEEEEECHHHheeEccCCCCCeEE
Confidence 1235 9999998778999999999999999999999976544457899
Q ss_pred eeeEecccCCCCCCeeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 472 SGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 472 ~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
++|...+.++..++.||||++|||++|++||++++|||||+|+
T Consensus 298 ~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 298 LAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp BSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 9999877655556789999999999999999999999999986
No 6
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=4.6e-64 Score=511.74 Aligned_cols=321 Identities=42% Similarity=0.784 Sum_probs=289.8
Q ss_pred cceEeceeccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCcccccCCcccCCCCCceeecCeEEEEEeccce
Q 010251 76 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA 155 (514)
Q Consensus 76 ~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs 155 (514)
...+||.|+.+.+|+++|+||||||+++|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 3 ~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 81 (323)
T 3cms_A 3 VASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTGS 81 (323)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEE
T ss_pred cceeeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCC-cccccCCCCCCCccCCCeEECCcEEEEEeCCCC
Confidence 4568999999999999999999999999999999999999999995 568999999999999999999999999999999
Q ss_pred EEEEEEEEEEEECCEEecceeEEEEEecccccccccccceEEeecccccccCCCCchHHHHHHcCCCCCCEEEEEecCCC
Q 010251 156 ISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDI 235 (514)
Q Consensus 156 ~~G~~~~D~v~igg~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~ 235 (514)
+.|.+++|+|++++..++++.||++....+..|....++||||||++..+.....+++++|++||.|.+++||+||.+..
T Consensus 82 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~ 161 (323)
T 3cms_A 82 MQGILGYDTVTVSNIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNG 161 (323)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTS
T ss_pred eEEEEEEEEEEECCeEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHHHHHCCCCCCCEEEEEECCCC
Confidence 99999999999999999999999999876544555678999999999988778889999999999999999999998863
Q ss_pred CCCCCcEEEECCcCCCCcccceEEEecccCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHHHHHHHHHHhc
Q 010251 236 EGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIG 315 (514)
Q Consensus 236 ~~~~~G~L~fGg~D~s~~~g~l~~~pl~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~~~~~l~~~i~ 315 (514)
. .|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+. +..+..++|||||+++++|++++++|.++++
T Consensus 162 ~---~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 237 (323)
T 3cms_A 162 Q---ESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVA-CEGGCQAILDTGTSKLVGPSSDILNIQQAIG 237 (323)
T ss_dssp S---CEEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE-STTCEEEEECTTCCSEEECHHHHHHHHHHHT
T ss_pred C---CEEEEECCCChhhccCceEEEECccCCeEEEEEeeEEECCEEee-cCCCcEEEEecCCccEeCCHHHHHHHHHHhC
Confidence 2 39999999999999999999999989999999999999998775 4567899999999999999999999999987
Q ss_pred cCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCcccchhhhHHH
Q 010251 316 ASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAV 395 (514)
Q Consensus 316 ~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (514)
+..
T Consensus 238 ~~~----------------------------------------------------------------------------- 240 (323)
T 3cms_A 238 ATQ----------------------------------------------------------------------------- 240 (323)
T ss_dssp CEE-----------------------------------------------------------------------------
T ss_pred Cee-----------------------------------------------------------------------------
Confidence 650
Q ss_pred HHHHHHHhhchhhHHHHhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceEEeccCccceeEeeeE
Q 010251 396 IWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFT 475 (514)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~y~~~~~~~~~~~C~~~~~ 475 (514)
...+.|.++|+....+|+|+|+|+|++++|+|++|+++ ....|+++|+
T Consensus 241 ----------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~----~~~~C~~~i~ 288 (323)
T 3cms_A 241 ----------------------------NQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPSAYTSQ----DQGFCTSGFQ 288 (323)
T ss_dssp ----------------------------ETTTEEEECTTCTTTSCCEEEEETTEEEEECHHHHEEE----ETTEEEESEE
T ss_pred ----------------------------cCCCcEEEECCCCccCceEEEEECCEEEEECHHHhccC----CCCEEEEEEE
Confidence 12456889999888899999999999999999999998 2358999888
Q ss_pred ecccCCCCCCeeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 476 AFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 476 ~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
..+ .++.||||++|||++|++||++++|||||+++
T Consensus 289 ~~~----~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 289 SEN----HSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp EC-------CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eCC----CCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 654 34689999999999999999999999999986
No 7
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=6.4e-64 Score=511.96 Aligned_cols=326 Identities=44% Similarity=0.850 Sum_probs=293.1
Q ss_pred ceEeceeccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCcccccCCcccCCCCCceeecCeEEEEEeccceE
Q 010251 77 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAI 156 (514)
Q Consensus 77 ~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~ 156 (514)
..+||.|+.+.+|+++|+||||||+++|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|++
T Consensus 3 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~ 81 (329)
T 1dpj_A 3 HDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECG-SLACFLHSKYDHEASSSYKANGTEFAIQYGTGSL 81 (329)
T ss_dssp EEEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEE
T ss_pred cceeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCC-CcccCCcCcCCcccCcCeEECCcEEEEEECCceE
Confidence 468999999999999999999999999999999999999999996 4479889999999999999999999999999999
Q ss_pred EEEEEEEEEEECCEEecceeEEEEEecccccccccccceEEeecccccccCCCCchHHHHHHcCCCCCCEEEEEecCCCC
Q 010251 157 SGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIE 236 (514)
Q Consensus 157 ~G~~~~D~v~igg~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~ 236 (514)
.|.+++|+|++++..++++.||++....+..|....++||||||++..+.....+++++|++||+|++++||+||.+...
T Consensus 82 ~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~ 161 (329)
T 1dpj_A 82 EGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSK 161 (329)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGG
T ss_pred EEEEEEEEEEECCeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCC
Confidence 99999999999999999999999998765445566789999999998887778889999999999999999999987531
Q ss_pred -CCCCcEEEECCcCCCCcccceEEEecccCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHHHHHHHHHHhc
Q 010251 237 -GEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIG 315 (514)
Q Consensus 237 -~~~~G~L~fGg~D~s~~~g~l~~~pl~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~~~~~l~~~i~ 315 (514)
...+|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+. ..+..++|||||+++++|++++++|.++++
T Consensus 162 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 239 (329)
T 1dpj_A 162 DTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAE--LESHGAAIDTGTSLITLPSGLAEMINAEIG 239 (329)
T ss_dssp TCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE--CSSCEEEECTTCSCEEECHHHHHHHHHHHT
T ss_pred CCCCCcEEEEcCCChhhcCCceEEEEcCCCceEEEEeeeEEECCeEec--CCCccEEeeCCCCcEECCHHHHHHHHHHhC
Confidence 23479999999999999999999999989999999999999998764 356799999999999999999999999986
Q ss_pred cCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCcccchhhhHHH
Q 010251 316 ASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAV 395 (514)
Q Consensus 316 ~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (514)
+.
T Consensus 240 ~~------------------------------------------------------------------------------ 241 (329)
T 1dpj_A 240 AK------------------------------------------------------------------------------ 241 (329)
T ss_dssp CE------------------------------------------------------------------------------
T ss_pred Cc------------------------------------------------------------------------------
Confidence 54
Q ss_pred HHHHHHHhhchhhHHHHhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceEEeccCccceeEeeeE
Q 010251 396 IWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFT 475 (514)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~y~~~~~~~~~~~C~~~~~ 475 (514)
....+.|.++|+....+|+|+|+|+|++++|+|++|+++.. ..|+++|.
T Consensus 242 ---------------------------~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~----~~C~~~~~ 290 (329)
T 1dpj_A 242 ---------------------------KGWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTLEVS----GSCISAIT 290 (329)
T ss_dssp ---------------------------ECTTSSEEECGGGGGGCCCEEEEETTEEEEECTTTSEEEET----TEEEECEE
T ss_pred ---------------------------cCCCCeEEEECCCCCcCCcEEEEECCEEEEECHHHhEecCC----CEEEEEEE
Confidence 01256789999987789999999999999999999999754 47999998
Q ss_pred ecccCCCCCCeeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 476 AFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 476 ~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
..+.+.+.++.||||++|||++|++||++++|||||+++
T Consensus 291 ~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 291 PMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp ECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 876554456799999999999999999999999999986
No 8
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=4.1e-64 Score=511.34 Aligned_cols=319 Identities=43% Similarity=0.799 Sum_probs=285.4
Q ss_pred eEeceeccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCcccccCCcccCCCCCceeecCeEEEEEeccceEE
Q 010251 78 IVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAIS 157 (514)
Q Consensus 78 ~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~~ 157 (514)
.+||.|+.|.+|+++|+||||||+++|++||||+++||+|..|. ...|..++.|+|++|+|++..++.|.+.|++|++.
T Consensus 2 ~~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 80 (320)
T 4aa9_A 2 REPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCK-SNVCKNHHRFDPRKSSTFRNLGKPLSIHYGTGSME 80 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred CccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCC-ccccCCCCCCCCCCCcCeEcCCcEEEEEECCcEEE
Confidence 47899999999999999999999999999999999999999996 56899999999999999999999999999999999
Q ss_pred EEEEEEEEEECCEEecceeEEEEEecccccccccccceEEeecccccccCCCCchHHHHHHcCCCCCCEEEEEecCCCCC
Q 010251 158 GFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEG 237 (514)
Q Consensus 158 G~~~~D~v~igg~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~ 237 (514)
|.+++|+|++++..++++.||++....+..|....++||||||++..+.....+++++|++||.|++++||+||.+.
T Consensus 81 G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~--- 157 (320)
T 4aa9_A 81 GFLGYDTVTVSNIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVARDLFSVYMDRN--- 157 (320)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSS---
T ss_pred EEEEEEEEEECCEeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHHhCCCCCCceEEEEeCCC---
Confidence 99999999999999999999999987665566677899999999998877788999999999999999999999985
Q ss_pred CCCcEEEECCcCCCCcccceEEEecccCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHHHHHHHHHHhccC
Q 010251 238 EEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS 317 (514)
Q Consensus 238 ~~~G~L~fGg~D~s~~~g~l~~~pl~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~~~~~l~~~i~~~ 317 (514)
...|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.++++.+. +..+..++|||||+++++|++++++|.+++++.
T Consensus 158 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~ 236 (320)
T 4aa9_A 158 GQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVA-CVGGCQAILDTGTSVLFGPSSDILKIQMAIGAT 236 (320)
T ss_dssp SSCCEEEETCCCGGGEEEEEEEEECSSBTTBEEEECEEEETTEEEE-STTCEEEEECTTCSSEEEEHHHHHHHHHHTTCE
T ss_pred CCCeEEEEcccCHHHccCceEEEEcccCCceEEEEeEEEECCEEec-cCCCcEEEEECCCCcEECCHHHHHHHHHHhCCc
Confidence 2389999999999999999999999999999999999999998875 446789999999999999999999999998765
Q ss_pred cccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCcccchhhhHHHHH
Q 010251 318 GVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIW 397 (514)
Q Consensus 318 ~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (514)
.
T Consensus 237 ~------------------------------------------------------------------------------- 237 (320)
T 4aa9_A 237 E------------------------------------------------------------------------------- 237 (320)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHhhchhhHHHHhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceEEeccCccceeEeeeEec
Q 010251 398 MQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAF 477 (514)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~y~~~~~~~~~~~C~~~~~~~ 477 (514)
...+.|.++|+....+|+|+|+|+|++++|++++|+.+. ...|+++|...
T Consensus 238 --------------------------~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~~----~~~C~~~i~~~ 287 (320)
T 4aa9_A 238 --------------------------NRYGEFDVNCGNLRSMPTVVFEINGRDYPLSPSAYTSKD----QGFCTSGFQGD 287 (320)
T ss_dssp --------------------------CTTSCEEECGGGGGGCCCEEEEETTEEEEECHHHHEEEE----TTEEEESEEEE
T ss_pred --------------------------cCCCcEEEeCCCCCcCceEEEEECCEEEEECHHHhccCC----CCeEEEEEEcC
Confidence 124679999998778999999999999999999999762 25899988762
Q ss_pred ccCCCCCCeeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 478 DVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 478 ~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
..++.||||++|||++|++||++++|||||+||
T Consensus 288 ----~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 288 ----NNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp ----TTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ----CCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 234679999999999999999999999999986
No 9
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=8.9e-64 Score=510.89 Aligned_cols=325 Identities=43% Similarity=0.839 Sum_probs=292.5
Q ss_pred eEeceeccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCcccccCCcccCCCCCceeecCeEEEEEeccceEE
Q 010251 78 IVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAIS 157 (514)
Q Consensus 78 ~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~~ 157 (514)
.+||+ +.+.+|+++|+||||||+++|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|++.
T Consensus 4 ~~~l~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 81 (329)
T 1htr_B 4 YEPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLT 81 (329)
T ss_dssp CCGGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred eeeeE-EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-CcccCCCCcCCCccCCCeEECCcEEEEEeCCCCeE
Confidence 47888 88999999999999999999999999999999999995 45799899999999999999999999999999999
Q ss_pred EEEEEEEEEECCEEecceeEEEEEecccccccccccceEEeecccccccCCCCchHHHHHHcCCCCCCEEEEEecCCCCC
Q 010251 158 GFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEG 237 (514)
Q Consensus 158 G~~~~D~v~igg~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~ 237 (514)
|.+++|+|++++..++++.||++....+..|....++||||||++..+.....|++++|++||.|.+++||+||.+...
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~- 160 (329)
T 1htr_B 82 GFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQG- 160 (329)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCS-
T ss_pred EEEEeeeEEEcceEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCC-
Confidence 9999999999999999999999987766556567889999999999887778899999999999999999999988632
Q ss_pred CCCcEEEECCcCCCCcccceEEEecccCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHHHHHHHHHHhccC
Q 010251 238 EEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS 317 (514)
Q Consensus 238 ~~~G~L~fGg~D~s~~~g~l~~~pl~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~~~~~l~~~i~~~ 317 (514)
...|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+..+..+..++|||||+++++|++++++|.+++++.
T Consensus 161 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 240 (329)
T 1htr_B 161 SSGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQ 240 (329)
T ss_dssp SEEEEEEESSCCGGGEEEEEEEEEBCSSSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCE
T ss_pred CCCcEEEEcccCHHHcCCceEEEECCCCceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHHHHHHHHHHhCCe
Confidence 23799999999999999999999999899999999999999987643456789999999999999999999999998765
Q ss_pred cccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCcccchhhhHHHHH
Q 010251 318 GVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIW 397 (514)
Q Consensus 318 ~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (514)
.
T Consensus 241 ~------------------------------------------------------------------------------- 241 (329)
T 1htr_B 241 E------------------------------------------------------------------------------- 241 (329)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred e-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHhhchhhHHHHhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceEEeccCccceeEeeeEec
Q 010251 398 MQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAF 477 (514)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~y~~~~~~~~~~~C~~~~~~~ 477 (514)
...+.|.++|+....+|+|+|+|+|++++|+|++|+++.. +.|+++|+..
T Consensus 242 --------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~----g~C~~~~~~~ 291 (329)
T 1htr_B 242 --------------------------DEYGQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYILSNN----GYCTVGVEPT 291 (329)
T ss_dssp --------------------------CTTSCEEECGGGGGGSCCEEEEETTEEEEECHHHHEEECS----SCEEESEEEE
T ss_pred --------------------------cCCCeEEEeCCCcccCCcEEEEECCEEEEECHHHhcccCC----CEEEEEEEEC
Confidence 1245688999987789999999999999999999999854 3899999877
Q ss_pred ccCCCCCC-eeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 478 DVAPPRGP-LWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 478 ~~~~~~~~-~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
+.+.+.++ .||||++|||++|++||++++|||||+++
T Consensus 292 ~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 292 YLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp CCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 65444556 89999999999999999999999999986
No 10
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=1.3e-63 Score=508.57 Aligned_cols=322 Identities=41% Similarity=0.758 Sum_probs=291.3
Q ss_pred eEeceeccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCcccccCCcccCCCCCceeecCeEEEEEeccceEE
Q 010251 78 IVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAIS 157 (514)
Q Consensus 78 ~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~~ 157 (514)
.+||.|+.+.+|+++|+||||||+++|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|++.
T Consensus 3 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~ 81 (324)
T 1am5_A 3 TEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCS-AQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMR 81 (324)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEE
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-cccccCCCcCCCccCCCeEeCCcEEEEEECCCCeE
Confidence 47999999999999999999999999999999999999999996 45799899999999999999999999999999999
Q ss_pred EEEEEEEEEECCEEecceeEEEEEecccccccccccceEEeecccccccCCCCchHHHHHHcCCCCCCEEEEEecCCCCC
Q 010251 158 GFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEG 237 (514)
Q Consensus 158 G~~~~D~v~igg~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~ 237 (514)
|.+++|+|++++..++++.||++....+..|....++||||||++..+.....|++++|++||.|.+++||+||.+..
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~-- 159 (324)
T 1am5_A 82 GILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGG-- 159 (324)
T ss_dssp EEEEEEEEESSSSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTT--
T ss_pred EEEEECceeECCcEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHHhcCCCCCCEEEEEecCCC--
Confidence 999999999999999999999999876655556778999999999888777889999999999999999999998863
Q ss_pred CCCcEEEECCcCCCCcccceEEEecccCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHHHHHHHHHHhccC
Q 010251 238 EEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS 317 (514)
Q Consensus 238 ~~~G~L~fGg~D~s~~~g~l~~~pl~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~~~~~l~~~i~~~ 317 (514)
...|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+. +.+ ..++|||||+++++|++++++|.+++++.
T Consensus 160 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 237 (324)
T 1am5_A 160 ANGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAA-CEG-CQAIVDTGTSKIVAPVSALANIMKDIGAS 237 (324)
T ss_dssp CSCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECC-CCC-EEEEECTTCSSEEECTTTHHHHHHHHTCE
T ss_pred CCCcEEEECccCHHHcCCceEEEecCCCcEEEEEEeEEEECCceee-ccC-ceEEEecCCccEECCHHHHHHHHHHhCCc
Confidence 2389999999999999999999999988999999999999998764 334 89999999999999999999999988542
Q ss_pred cccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCcccchhhhHHHHH
Q 010251 318 GVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIW 397 (514)
Q Consensus 318 ~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (514)
T Consensus 238 -------------------------------------------------------------------------------- 237 (324)
T 1am5_A 238 -------------------------------------------------------------------------------- 237 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhchhhHHHHhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceEEeccCccceeEeeeEec
Q 010251 398 MQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAF 477 (514)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~y~~~~~~~~~~~C~~~~~~~ 477 (514)
...|.|.++|+....+|+|+|+|+|++++|+|++|+++. ...|+++|+..
T Consensus 238 --------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~----~~~C~~~~~~~ 287 (324)
T 1am5_A 238 --------------------------ENQGEMMGNCASVQSLPDITFTINGVKQPLPPSAYIEGD----QAFCTSGLGSS 287 (324)
T ss_dssp --------------------------ECCCCEECCTTSSSSSCCEEEEETTEEEEECHHHHEEES----SSCEEECEEEC
T ss_pred --------------------------ccCCcEEEeCCCcccCCcEEEEECCEEEEECHHHhcccC----CCeEEEEEEEC
Confidence 014568899998888999999999999999999999985 35899999887
Q ss_pred ccCCCCCCeeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 478 DVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 478 ~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
+.+.+.++.||||++|||++|++||++++|||||+++
T Consensus 288 ~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 288 GVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp CSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred ccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 6544455789999999999999999999999999986
No 11
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=6.9e-63 Score=512.75 Aligned_cols=321 Identities=35% Similarity=0.676 Sum_probs=288.5
Q ss_pred CcceEeceeccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCcccccCCcccCCCCCceeecCeEEEEEeccc
Q 010251 75 DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTG 154 (514)
Q Consensus 75 ~~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~g 154 (514)
....+||.|+.+.+|+++|+||||||++.|+|||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|
T Consensus 50 ~~~~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 128 (375)
T 1miq_A 50 ENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCN-SSGCSIKNLYDSSKSKSYEKDGTKVDITYGSG 128 (375)
T ss_dssp TTBCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCC-SSGGGGSCCBCGGGCTTCEEEEEEEEEEETTE
T ss_pred CcceEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCC-cccccCCCcCCCccCCceEECCcEEEEEeCCC
Confidence 34568999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred eEEEEEEEEEEEECCEEecceeEEEEEe----cccccccccccceEEeecccccccCCCCchHHHHHHcCCCCCCEEEEE
Q 010251 155 AISGFFSQDNVKVGDLVVKNQDFIEATK----EASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFW 230 (514)
Q Consensus 155 s~~G~~~~D~v~igg~~v~~~~fg~~~~----~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~ 230 (514)
++.|.+++|+|++|+..+++ .||++.. .. .|....++||||||++..+.....|++++|++||.|.+++||+|
T Consensus 129 s~~G~~~~Dtv~ig~~~v~~-~Fg~~~~~~~~~~--~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~ 205 (375)
T 1miq_A 129 TVKGFFSKDLVTLGHLSMPY-KFIEVTDTDDLEP--IYSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFY 205 (375)
T ss_dssp EEEEEEEEEEEEETTEEEEE-EEEEEEECGGGTT--HHHHSCCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEE
T ss_pred eEEEEEEEEEEEEcCceECc-EEEEEEecccccc--ccccCCCceEEeCCCCcccccCCCCHHHHHHhccCcCCCEEEEE
Confidence 99999999999999999999 9999998 43 35556789999999999888788899999999999999999999
Q ss_pred ecCCCCCCCCcEEEECCcCCCCcccceEEEecccCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHHHHHHH
Q 010251 231 LNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQI 310 (514)
Q Consensus 231 l~~~~~~~~~G~L~fGg~D~s~~~g~l~~~pl~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~~~~~l 310 (514)
|.+.. ..+|+|+|||+|+++|.|+++|+|+...++|.|.++ |.|+++.+ .++.++|||||+++++|++++++|
T Consensus 206 L~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~-i~v~g~~~----~~~~aiiDSGTs~~~lP~~~~~~l 278 (375)
T 1miq_A 206 LPVHD--VHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLD-VHFGKQTM----EKANVIVDSGTTTITAPSEFLNKF 278 (375)
T ss_dssp CCTTC--TTEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEE-EEETTEEE----EEEEEEECTTBSSEEECHHHHHHH
T ss_pred ecCCC--CCCeEEEEcccCHHHcCCceEEEecCCCceEEEEEE-EEECCEEc----ccceEEecCCCccEEcCHHHHHHH
Confidence 98863 258999999999999999999999999999999999 99999876 567899999999999999999999
Q ss_pred HHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCcccchh
Q 010251 311 NHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSA 390 (514)
Q Consensus 311 ~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (514)
.+++++..
T Consensus 279 ~~~~~~~~------------------------------------------------------------------------ 286 (375)
T 1miq_A 279 FANLNVIK------------------------------------------------------------------------ 286 (375)
T ss_dssp HHHHTCEE------------------------------------------------------------------------
T ss_pred HHHhCCcc------------------------------------------------------------------------
Confidence 99987640
Q ss_pred hhHHHHHHHHHHhhchhhHHHHhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceEEeccCcccee
Q 010251 391 CEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQC 470 (514)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~y~~~~~~~~~~~C 470 (514)
+...+.|.++|+. ..+|+|+|+|+|++++|+|++|+++....+...|
T Consensus 287 --------------------------------~~~~g~~~~~C~~-~~~P~i~f~f~g~~~~l~~~~yi~~~~~~g~~~C 333 (375)
T 1miq_A 287 --------------------------------VPFLPFYVTTCDN-KEMPTLEFKSANNTYTLEPEYYMNPILEVDDTLC 333 (375)
T ss_dssp --------------------------------CTTSSCEEEETTC-TTCCCEEEECSSCEEEECGGGSEEESSSSSCSEE
T ss_pred --------------------------------cCCCCeEEEECCC-CCCCcEEEEECCEEEEECHHHhEeeccCCCCCeE
Confidence 1235678999997 7899999999999999999999998654334689
Q ss_pred EeeeEecccCCCCCCeeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 471 ISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 471 ~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
+++|+..+.+ .+.||||++|||++|++||++++|||||+++
T Consensus 334 ~~~~~~~~~~---~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 334 MITMLPVDID---SNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp EESEEECCSS---SSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEEEECCCC---CCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 9999876531 2689999999999999999999999999985
No 12
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.6e-62 Score=519.78 Aligned_cols=321 Identities=32% Similarity=0.585 Sum_probs=289.3
Q ss_pred CcceEeceeccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCcccccCCcccCCCCCceeecCeEEEEEeccc
Q 010251 75 DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTG 154 (514)
Q Consensus 75 ~~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~g 154 (514)
....+||.|+.+.+|+++|+||||||+++|++||||+++||+|..|. +..|..++.|+|+.|+|++..++.|.+.|++|
T Consensus 125 ~~~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~-s~~C~~~~~ydps~SsT~~~~~~~f~i~YgdG 203 (451)
T 3qvc_A 125 EFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT-SESCESKNHYDSSKSKTYEKDDTPVKLTSKAG 203 (451)
T ss_dssp --CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEECSSE
T ss_pred cCCccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-ccccCCCCCCCCCCCcccccCCCEEEEEECCC
Confidence 45678999999999999999999999999999999999999999996 57899999999999999999999999999999
Q ss_pred eEEEEEEEEEEEECCEEecceeEEEEEe----cccccccccccceEEeecccccccCCCCchHHHHHHcCCCCCCEEEEE
Q 010251 155 AISGFFSQDNVKVGDLVVKNQDFIEATK----EASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFW 230 (514)
Q Consensus 155 s~~G~~~~D~v~igg~~v~~~~fg~~~~----~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~ 230 (514)
++.|.++.|+|++|+..++ +.||++.. ..+ |....++||||||++..+.....|++++|++||.|++++||+|
T Consensus 204 s~~G~~~~Dtv~igg~~v~-~~Fg~a~~t~~~~~~--f~~~~~dGILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~ 280 (451)
T 3qvc_A 204 TISGIFSKDLVTIGKLSVP-YKFIEMTEIVGFEPF--YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIY 280 (451)
T ss_dssp EEEEEEEEEEEEETTEEEE-EEEEEEEEEEECTTH--HHHSCCCEEEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEEE
T ss_pred EEEEEEEEEEEEECCEEEE-EEEEEEEeccccCCC--ccCCCCCEEEecCCCcccccCCCCHHHHHHHcCCCCCCEEEEE
Confidence 9999999999999999999 99999988 544 5556789999999999887778899999999999999999999
Q ss_pred ecCCCCCCCCcEEEECCcCCCCcccceEEEecccCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHHHHHHH
Q 010251 231 LNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQI 310 (514)
Q Consensus 231 l~~~~~~~~~G~L~fGg~D~s~~~g~l~~~pl~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~~~~~l 310 (514)
|.+.. ..+|+|+|||+|+++|.|+++|+|+.+.++|.|.++ |.|++. +.....++|||||+++++|++++++|
T Consensus 281 L~~~~--~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~v~l~-I~Vgg~----~~~~~~aiiDSGTt~i~lP~~~~~~i 353 (451)
T 3qvc_A 281 LPPEN--KNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNV----SSKKANVILDSATSVITVPTEFFNQF 353 (451)
T ss_dssp CCTTC--TTEEEEEESSCCGGGEEEEEEEEECSSTTSSEEEEE-EEETTE----EEEEEEEEECTTBSSEEECHHHHHHH
T ss_pred EcCCC--CCCCEEEECCcchhhcCCceEEEEcccCCeeEEEEE-EEECCc----cCCCceEEEeCCCccccCCHHHHHHH
Confidence 99873 248999999999999999999999999999999999 999998 33578999999999999999999999
Q ss_pred HHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCcccchh
Q 010251 311 NHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSA 390 (514)
Q Consensus 311 ~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (514)
.+++++..
T Consensus 354 ~~~i~a~~------------------------------------------------------------------------ 361 (451)
T 3qvc_A 354 VESASVFK------------------------------------------------------------------------ 361 (451)
T ss_dssp HTTTTCEE------------------------------------------------------------------------
T ss_pred HHHcCCee------------------------------------------------------------------------
Confidence 99987650
Q ss_pred hhHHHHHHHHHHhhchhhHHHHhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceEEeccCcccee
Q 010251 391 CEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQC 470 (514)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~y~~~~~~~~~~~C 470 (514)
....|.|.+||+ ...+|+|+|+|+|.+++|+|++|+++..+.....|
T Consensus 362 --------------------------------~~~~g~y~v~C~-~~~~P~itf~fgg~~i~lp~~~yi~~~~~~~~~~C 408 (451)
T 3qvc_A 362 --------------------------------VPFLSLYVTTCG-NTKLPTLEYRSPNKVYTLEPKQYLEPLENIFSALC 408 (451)
T ss_dssp --------------------------------CTTSSCEEEETT-CTTCCCEEEEETTEEEEECHHHHEEECTTTSTTEE
T ss_pred --------------------------------cCCCCeEEeeCC-cCcCCcEEEEECCEEEEEcHHHheeecccCCCCeE
Confidence 012567999999 77899999999999999999999998765445789
Q ss_pred EeeeEecccCCCCCCeeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 471 ISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 471 ~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
+++|+..+.+ ++.||||++|||++|+|||++++|||||+|+
T Consensus 409 ~~~i~~~~~~---~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 409 MLNIVPIDLE---KNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp EECEEECCCS---TTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEEEeCCCC---CCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 9999875421 4689999999999999999999999999986
No 13
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=5.2e-62 Score=515.38 Aligned_cols=322 Identities=35% Similarity=0.657 Sum_probs=288.1
Q ss_pred CcceEeceeccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCcccccCCcccCCCCCceeecCeEEEEEeccc
Q 010251 75 DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTG 154 (514)
Q Consensus 75 ~~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~g 154 (514)
....+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|
T Consensus 126 ~~~~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~-~~~C~~~~~ydps~SsT~~~~~~~~~i~YgdG 204 (453)
T 2bju_A 126 SNDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCT-TAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSG 204 (453)
T ss_dssp CSEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-STTGGGSCCBCGGGCTTCEEEEEEEEEECSSS
T ss_pred CCCceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCC-ccccCCCCcCCCccCCceeECCcEEEEEcCCC
Confidence 34579999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred eEEEEEEEEEEEECCEEecceeEEEEEecc--cccccccccceEEeecccccccCCCCchHHHHHHcCCCCCCEEEEEec
Q 010251 155 AISGFFSQDNVKVGDLVVKNQDFIEATKEA--SITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLN 232 (514)
Q Consensus 155 s~~G~~~~D~v~igg~~v~~~~fg~~~~~~--~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~ 232 (514)
++.|.+++|+|++|+..++ +.||++.... +..|....++||||||++..+.....|++++|++||.|.+++||+||.
T Consensus 205 s~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~ 283 (453)
T 2bju_A 205 TVSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLP 283 (453)
T ss_dssp EEEEEEEEEEEEETTEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECC
T ss_pred CeEEEEEEEEEEEeCcEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeC
Confidence 9999999999999999999 9999999876 544555678999999999988777889999999999999999999999
Q ss_pred CCCCCCCCcEEEECCcCCCCcccceEEEecccCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHHHHHHHHH
Q 010251 233 RDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINH 312 (514)
Q Consensus 233 ~~~~~~~~G~L~fGg~D~s~~~g~l~~~pl~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~~~~~l~~ 312 (514)
+.. ..+|+|+|||+|+++|.|+++|+|+...++|.|.++ |.|++ .+ + .++.+||||||+++++|++++++|.+
T Consensus 284 ~~~--~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~V~l~-I~Vgg-~~--~-~~~~aIiDSGTsl~~lP~~~~~~l~~ 356 (453)
T 2bju_A 284 VHD--KHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLD-AHVGN-IM--L-EKANCIVDSGTSAITVPTDFLNKMLQ 356 (453)
T ss_dssp BTT--TBCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEE-EEETT-EE--E-EEEEEEECTTCCSEEECHHHHHHHTT
T ss_pred CCC--CCCeEEEECCCCHHHcCCceEEEecCCCceEEEEEE-EEECc-EE--e-ccccEEEcCCCCeEecCHHHHHHHHH
Confidence 862 348999999999999999999999998899999999 99999 33 2 67889999999999999999999988
Q ss_pred HhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCcccchhhh
Q 010251 313 AIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACE 392 (514)
Q Consensus 313 ~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (514)
++++.
T Consensus 357 ~i~~~--------------------------------------------------------------------------- 361 (453)
T 2bju_A 357 NLDVI--------------------------------------------------------------------------- 361 (453)
T ss_dssp TSSCE---------------------------------------------------------------------------
T ss_pred HhCCc---------------------------------------------------------------------------
Confidence 87654
Q ss_pred HHHHHHHHHHhhchhhHHHHhhhhccccCCCCCCC-CeeeeCCCCCCCCcEEEEECCEEEEeCcCcceEEeccCccceeE
Q 010251 393 MAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNG-ESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCI 471 (514)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~-~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~y~~~~~~~~~~~C~ 471 (514)
+...| .|.++|+. ..+|+|+|+|+|.+++|+|++|+++....+...|+
T Consensus 362 ------------------------------~~~~g~~~~v~C~~-~~~P~itf~fgg~~~~l~~~~yi~~~~~~g~~~C~ 410 (453)
T 2bju_A 362 ------------------------------KVPFLPFYVTLCNN-SKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCM 410 (453)
T ss_dssp ------------------------------ECTTSSCEEEETTC-TTCCCEEEECSSCEEEECHHHHEEECTTTSTTEEE
T ss_pred ------------------------------ccCCCceEEEecCC-CCCCcEEEEECCEEEEECHHHhEeecccCCCceEE
Confidence 01244 68999997 68999999999999999999999986543446899
Q ss_pred eeeEecccCCCCCCeeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 472 SGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 472 ~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
++|+..+.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 411 ~~~~~~~~~---~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 411 LNIIGLDFP---VPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp ECEEECCCS---SCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEEeCCCC---CCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 999876521 3489999999999999999999999999985
No 14
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=2e-61 Score=493.74 Aligned_cols=318 Identities=29% Similarity=0.536 Sum_probs=284.3
Q ss_pred cceEeceeccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCccc--ccCCcccCCCCCceeecCeEEEEEecc
Q 010251 76 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSC--YFHSKYKSSHSSTYKRNGTSAAIQYGT 153 (514)
Q Consensus 76 ~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C--~~~~~f~~~~SsT~~~~~~~~~~~Yg~ 153 (514)
...++|.|+.+.+|+++|+|| ||+++|+|||||+++||+|..|. ...| ..++.|+|++| ||+..++.|.+.|++
T Consensus 6 ~~~~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~~~y~~~~S-T~~~~~~~~~i~Yg~ 81 (330)
T 1yg9_A 6 PLYKLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECV-GGACVCPNLQKYEKLKP-KYISDGNVQVKFFDT 81 (330)
T ss_dssp CSCSCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCC-SGGGGSTTCCCCCCSSC-EEEEEEEEEEEETTT
T ss_pred eeEeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-CccCcccccCccCCCCC-ceEECCCEEEEEECC
Confidence 345789999999999999999 89999999999999999999996 4589 88899999999 999999999999999
Q ss_pred ceEEEEEEEEEEEECCEEecceeEEEEEecccccccccccceEEeecccccc-cCCCCchHHHHHHcCCCCCCEEEEEec
Q 010251 154 GAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS-IGKAIPVWYNMLDQGLVKEPVFSFWLN 232 (514)
Q Consensus 154 gs~~G~~~~D~v~igg~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s-~~~~~~~~~~L~~qg~i~~~~FSl~l~ 232 (514)
|++.|.+++|+|++++..++++.||++... +..|....++||||||++..+ .....|++++|++||.| +++||+||.
T Consensus 82 Gs~~G~~~~Dtv~ig~~~~~~~~fg~~~~~-~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i-~~~FS~~l~ 159 (330)
T 1yg9_A 82 GSAVGRGIEDSLTISQLTTSQQDIVLADEL-SQEVCILSADVVVGIAAPGCPNALKGKTVLENFVEENLI-APVFSIHHA 159 (330)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEEEEEE-CTHHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHTTSS-CSEEEEEEE
T ss_pred ceEEEEEEEEEEEECCEEEcCeEEEEEEEc-ccccccccCceEEEcCcchhccccCCCCHHHHHHhcCCC-CceEEEEEc
Confidence 999999999999999999999999999987 434555678999999999887 66788899999999999 999999998
Q ss_pred CCCCCCCCcEEEECCcCCCCcccceEEEecccCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHHHHHHHHH
Q 010251 233 RDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINH 312 (514)
Q Consensus 233 ~~~~~~~~G~L~fGg~D~s~~~g~l~~~pl~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~~~~~l~~ 312 (514)
+..+....|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+. ..+..+||||||+++++|++++++|.+
T Consensus 160 ~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~--~~~~~aiiDSGTs~~~lP~~~~~~l~~ 237 (330)
T 1yg9_A 160 RFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVA--PAGTQAIIDTSKAIIVGPKAYVNPINE 237 (330)
T ss_dssp ECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEE--CTTCEEEECTTCSSEEEEHHHHHHHHH
T ss_pred CCCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEEEEeCeEEECCEEEc--CCCcEEEEecCCccccCCHHHHHHHHH
Confidence 864333479999999999999999999999999999999999999998764 467899999999999999999999999
Q ss_pred HhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCcccchhhh
Q 010251 313 AIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACE 392 (514)
Q Consensus 313 ~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (514)
++++..
T Consensus 238 ~~~~~~-------------------------------------------------------------------------- 243 (330)
T 1yg9_A 238 AIGCVV-------------------------------------------------------------------------- 243 (330)
T ss_dssp HHTCEE--------------------------------------------------------------------------
T ss_pred HhCCcc--------------------------------------------------------------------------
Confidence 997650
Q ss_pred HHHHHHHHHHhhchhhHHHHhhhhccccCCCCCCC--Ce-eeeCCCCCCCCcEEEEECCEEEEeCcCcceEEeccCccce
Q 010251 393 MAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNG--ES-AVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQ 469 (514)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~--~~-~~~C~~~~~~P~l~f~fgg~~~~l~~~~y~~~~~~~~~~~ 469 (514)
...| .| .+||+....+|+|+|+|+|++++|+|++|+++. ...
T Consensus 244 -------------------------------~~~g~~~~~~~~C~~~~~~p~i~f~fgg~~~~l~~~~y~~~~----~~~ 288 (330)
T 1yg9_A 244 -------------------------------EKTTTRRICKLDCSKIPSLPDVTFVINGRNFNISSQYYIQQN----GNL 288 (330)
T ss_dssp -------------------------------EECSSCEEEEECGGGGGGSCCEEEEETTEEEEECHHHHEEEE----TTE
T ss_pred -------------------------------cCCCceEEEEEECCCccccCcEEEEECCEEEEECHHHhcccC----CCc
Confidence 0123 57 899997778999999999999999999999986 358
Q ss_pred eEeeeEecccCCCCCCeeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 470 CISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 470 C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
|+++|+.. +.++.||||++|||++|++||++++|||||+++
T Consensus 289 C~~~i~~~----~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 289 CYSGFQPC----GHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp EEESEEEE----TTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEeC----CCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 99988864 234689999999999999999999999999985
No 15
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=2.2e-61 Score=499.32 Aligned_cols=326 Identities=29% Similarity=0.516 Sum_probs=287.1
Q ss_pred CcceEeceeccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCcccccCCcccCCCCCceeecCeEEEEEeccc
Q 010251 75 DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTG 154 (514)
Q Consensus 75 ~~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~g 154 (514)
....+||.|+.+.+|+++|+||||||+++|+|||||+++||+|..|.....|..++.|+|++|+||+..++.|.+.|++|
T Consensus 6 ~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 85 (361)
T 1mpp_A 6 SVDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETDYNLNITYGTG 85 (361)
T ss_dssp CEEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEEEEEEEECSSC
T ss_pred ccceEEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEecCCeEEEEECCc
Confidence 34568999999999999999999999999999999999999999994234899999999999999999999999999999
Q ss_pred eEEEEEEEEEEEECCEEecceeEEEEEeccc-----ccccccccceEEeecccccccCC------CCchHHHHHHcCCCC
Q 010251 155 AISGFFSQDNVKVGDLVVKNQDFIEATKEAS-----ITFLAAKFDGILGLGFQEISIGK------AIPVWYNMLDQGLVK 223 (514)
Q Consensus 155 s~~G~~~~D~v~igg~~v~~~~fg~~~~~~~-----~~~~~~~~~GIlGLg~~~~s~~~------~~~~~~~L~~qg~i~ 223 (514)
++.|.+++|+|+|++..++++.||++....+ ..|....++||||||++..+... ..+++++|++||.|.
T Consensus 86 s~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~ 165 (361)
T 1mpp_A 86 GANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLIS 165 (361)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSS
T ss_pred eEEEEEEEEEEEECCEEEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccccccccccccCCCHHHHHHHcCCCC
Confidence 9999999999999999999999999998755 34555678999999998877543 788999999999999
Q ss_pred CCEEEEEecCCCCCCCCcEEEECCcCCCCcccceEEEecccCC----ceEEEEceEEECCeeecccCCCceEE-EcCCCC
Q 010251 224 EPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKG----YWQFEMGDVLIDGETTGYCSTGCNAI-ADSGTS 298 (514)
Q Consensus 224 ~~~FSl~l~~~~~~~~~G~L~fGg~D~s~~~g~l~~~pl~~~~----~w~v~l~~i~vgg~~~~~~~~~~~ai-iDTGTs 298 (514)
+++||+||.+. ...|+|+|||+|+++|.|+++|+|+.... +|.|.+++|.|+++.+. +..+..+| |||||+
T Consensus 166 ~~~FS~~l~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~-~~~~~~ai~iDSGTt 241 (361)
T 1mpp_A 166 SPVFSVYMNTN---DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAV-SFDGAQAFTIDTGTN 241 (361)
T ss_dssp SSEEEEECCCS---SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEE-EEEEEEEEEEETTCC
T ss_pred CcEEEEEecCC---CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeec-cCCCCEEEEECCCCC
Confidence 99999999885 23899999999999999999999997655 99999999999998764 33567899 999999
Q ss_pred CcccCHHHHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCC
Q 010251 299 LLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKS 378 (514)
Q Consensus 299 ~i~lp~~~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~ 378 (514)
++++|++++++|.+++++..
T Consensus 242 ~~~lP~~~~~~l~~~~~~~~------------------------------------------------------------ 261 (361)
T 1mpp_A 242 FFIAPSSFAEKVVKAALPDA------------------------------------------------------------ 261 (361)
T ss_dssp SEEEEHHHHHHHHHHHCTTC------------------------------------------------------------
T ss_pred ceeCCHHHHHHHHHHhCCcc------------------------------------------------------------
Confidence 99999999999999997640
Q ss_pred CCCCCCcccchhhhHHHHHHHHHHhhchhhHHHHhhhhccccCCCCCCCCeeeeCCCCCCC-CcEEEEE--C-----CEE
Q 010251 379 SDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSM-PNVSFTI--G-----GKV 450 (514)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~-P~l~f~f--g-----g~~ 450 (514)
+...+.|.++|+....+ |+|+|+| + |++
T Consensus 262 --------------------------------------------~~~~g~~~~~C~~~~~~~p~i~f~f~~g~~~~~g~~ 297 (361)
T 1mpp_A 262 --------------------------------------------TESQQGYTVPCSKYQDSKTTFSLVLQKSGSSSDTID 297 (361)
T ss_dssp --------------------------------------------EEETTEEEEEHHHHTTCCCEEEEEEECTTCSSCEEE
T ss_pred --------------------------------------------cCCCCcEEEECCCcccCCCcEEEEEEcCCcCCCCeE
Confidence 11245688999877778 9999999 8 899
Q ss_pred EEeCcCcceEEeccCccceeEeeeEecccCCCCCCeeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 451 FDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 451 ~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
++|+|++|+++... +...|+++|+.. .++.||||++|||++|++||++++|||||+++
T Consensus 298 ~~i~~~~y~~~~~~-~~~~C~~~i~~~-----~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 355 (361)
T 1mpp_A 298 VSVPISKMLLPVDK-SGETCMFIVLPD-----GGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLA 355 (361)
T ss_dssp EEEEGGGGEEECSS-SSCEEEESEEEE-----SSSCCEEEHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEECHHHhEEecCC-CCCeeEEEEEeC-----CCCCEEEChHHhccEEEEEECCCCEEEEEEcc
Confidence 99999999998643 235899888854 23589999999999999999999999999985
No 16
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=4.6e-59 Score=475.26 Aligned_cols=311 Identities=35% Similarity=0.656 Sum_probs=272.1
Q ss_pred eccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCcccccCCcccCCCCCceeecCeEEEEEeccce-EEEEEE
Q 010251 83 NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA-ISGFFS 161 (514)
Q Consensus 83 n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs-~~G~~~ 161 (514)
++.+.+|+++|+||||||+++|+|||||+++||+|..|..+ |..++.|+|++|+||+..++.|.+.|++|+ +.|.++
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c--~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~~G~~~ 88 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC--GSGQTKYDPNQSSTYQADGRTWSISYGDGSSASGILA 88 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC--CTTSCCBCGGGCTTCEEEEEEEEEECTTSCEEEEEEE
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH--hcCCCCCCcccCCCeeeCCCEEEEEECCCCCEEEEEE
Confidence 45688999999999999999999999999999999999733 677889999999999999999999999998 899999
Q ss_pred EEEEEECCEEecceeEEEEEecccccccccccceEEeeccccccc-CCCCchHHHHHHcCCCCCCEEEEEecCCCCCCCC
Q 010251 162 QDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI-GKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEG 240 (514)
Q Consensus 162 ~D~v~igg~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~-~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~ 240 (514)
+|+|++++..++++.||++....+. |....++||||||++..+. ....+++++|++||+|.+++||+||.+.. ....
T Consensus 89 ~D~v~~g~~~v~~~~fg~~~~~~~~-f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~-~~~~ 166 (325)
T 2apr_A 89 KDNVNLGGLLIKGQTIELAKREAAS-FASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKAK-NGGG 166 (325)
T ss_dssp EEEEEETTEEEEEEEEEEEEEECHH-HHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSSEEEEEECCGG-GTCC
T ss_pred EEEEEECCEEECcEEEEEEeccCcc-cccCCCceEEEeCCcccccccCCCCHHHHHHhcCCCCCceEEEEecCCC-CCCC
Confidence 9999999999999999999876553 5455689999999998764 35778999999999999999999997642 1248
Q ss_pred cEEEECCcCCCCcccceEEEecc-cCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHHHHHHHHHHhccCcc
Q 010251 241 GEIVFGGVDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGV 319 (514)
Q Consensus 241 G~L~fGg~D~s~~~g~l~~~pl~-~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~~~~~l~~~i~~~~~ 319 (514)
|+|+|||+|+++|.|+++|+|+. ..++|.|.+++|.||+ .+ +.....++|||||+++++|+++|+++.+++.+.-
T Consensus 167 G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~-~~--~~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~- 242 (325)
T 2apr_A 167 GEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGT-ST--VASSFDGILDTGTTLLILPNNIAASVARAYGASD- 242 (325)
T ss_dssp EEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETT-EE--EECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEE-
T ss_pred CEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECC-Ee--cCCCceEEEecCCccEECCHHHHHHHHHHHhccc-
Confidence 99999999999999999999996 5789999999999999 33 3567899999999999999999999999986540
Q ss_pred cccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCcccchhhhHHHHHHH
Q 010251 320 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQ 399 (514)
Q Consensus 320 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (514)
T Consensus 243 -------------------------------------------------------------------------------- 242 (325)
T 2apr_A 243 -------------------------------------------------------------------------------- 242 (325)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhchhhHHHHhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceEEeccCccceeEeeeEeccc
Q 010251 400 NKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDV 479 (514)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~ 479 (514)
+ ..+.|.++|+. ..+|+|+|+|+|.+++|++++|+++.. ...|++.|+..+
T Consensus 243 -----------------------~-~~g~~~~~C~~-~~~p~i~f~f~g~~~~ip~~~~~~~~~---~~~C~~~i~~~~- 293 (325)
T 2apr_A 243 -----------------------N-GDGTYTISCDT-SAFKPLVFSINGASFQVSPDSLVFEEF---QGQCIAGFGYGN- 293 (325)
T ss_dssp -----------------------C-SSSCEEECSCG-GGCCCEEEEETTEEEEECGGGGEEEEE---TTEEEESEEEES-
T ss_pred -----------------------C-CCCeEEEECCC-CCCCcEEEEECCEEEEECHHHEEEcCC---CCeEEEEEEcCC-
Confidence 0 01568899984 348999999998899999999998654 368999887543
Q ss_pred CCCCCCeeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 480 APPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 480 ~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
++.||||++|||++|++||++++|||||+++
T Consensus 294 ----~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 294 ----WGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp ----SSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ----CCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 3579999999999999999999999999986
No 17
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=8.8e-59 Score=473.96 Aligned_cols=313 Identities=30% Similarity=0.482 Sum_probs=270.3
Q ss_pred eccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCcccccCCcccCCCCCceee-cCeEEEEEeccce-EEEEE
Q 010251 83 NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKR-NGTSAAIQYGTGA-ISGFF 160 (514)
Q Consensus 83 n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~-~~~~~~~~Yg~gs-~~G~~ 160 (514)
.+.+.+|+++|+||||||+++|+|||||+++||+|..|. ...|..++.|+|++|+||+. .++.|.+.|++|+ +.|.+
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~~~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~ 89 (329)
T 3c9x_A 11 DSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETP-KSSATGHAIYTPSKSSTSKKVSGASWSISYGDGSSSSGDV 89 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCGGGCTTCEECTTCBEEEECTTSCEEEEEE
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCC-ccccCCCCcCCcccCcCceEcCCCeEEEEeCCCCcEEEEE
Confidence 356889999999999999999999999999999999996 33566789999999999999 6899999999998 89999
Q ss_pred EEEEEEECCEEecceeEEEEEecccccccccccceEEeeccccccc---CCCCchHHHHHHcCCCCCCEEEEEecCCCCC
Q 010251 161 SQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI---GKAIPVWYNMLDQGLVKEPVFSFWLNRDIEG 237 (514)
Q Consensus 161 ~~D~v~igg~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~---~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~ 237 (514)
++|+|++++..++++.||++....+..+....++||||||++..+. ....+++++|+++ |.+++||+||.+.
T Consensus 90 ~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~l~~~--- 164 (329)
T 3c9x_A 90 YTDKVTIGGFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASS--LAEPLFTADLRHG--- 164 (329)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHTT--SSSSEEEEECCSS---
T ss_pred EEEEEEECCEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHHHh--cCCCEEEEEecCC---
Confidence 9999999999999999999998655333335789999999988775 2467899999986 8899999999874
Q ss_pred CCCcEEEECCcCCCCcccceEEEecc-cCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHHHHHHHHHHhcc
Q 010251 238 EEGGEIVFGGVDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGA 316 (514)
Q Consensus 238 ~~~G~L~fGg~D~s~~~g~l~~~pl~-~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~~~~~l~~~i~~ 316 (514)
..|+|+|||+|+++|.|+++|+|+. ..++|.|.+++|.|+++.+ +.....+||||||+++++|++++++|.+++.+
T Consensus 165 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~ 241 (329)
T 3c9x_A 165 -QNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKL--NRNSIDGIADTGTTLLLLDDNVVDAYYANVQS 241 (329)
T ss_dssp -SCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCC--CSCCEEEEECTTCCSEEECHHHHHHHHTTCTT
T ss_pred -CCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEec--cCCCceEEEECCCCcEeCCHHHHHHHHHhCCC
Confidence 2899999999999999999999996 5789999999999999865 35678999999999999999999999988743
Q ss_pred CcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCcccchhhhHHHH
Q 010251 317 SGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVI 396 (514)
Q Consensus 317 ~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (514)
..
T Consensus 242 a~------------------------------------------------------------------------------ 243 (329)
T 3c9x_A 242 AQ------------------------------------------------------------------------------ 243 (329)
T ss_dssp CE------------------------------------------------------------------------------
T ss_pred cE------------------------------------------------------------------------------
Confidence 30
Q ss_pred HHHHHHhhchhhHHHHhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceEEeccCccceeEeeeEe
Q 010251 397 WMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTA 476 (514)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~y~~~~~~~~~~~C~~~~~~ 476 (514)
.....+.|.++|+ ..+|+|+|+|+|++++|++++|+++..+.+...|++.|+.
T Consensus 244 -------------------------~~~~~~~~~~~C~--~~~P~i~f~f~g~~~~ip~~~~~~~~~~~~~~~C~~~i~~ 296 (329)
T 3c9x_A 244 -------------------------YDNQQEGVVFDCD--EDLPSFSFGVGSSTITIPGDLLNLTPLEEGSSTCFGGLQS 296 (329)
T ss_dssp -------------------------EETTTTEEEEETT--CCCCCEEEEETTEEEEECGGGGEEEESSTTCSEEEESEEE
T ss_pred -------------------------EcCCCCEEEEECC--CCCCcEEEEECCEEEEECHHHeeeeccCCCCCeEEEEEEc
Confidence 0012467889998 4799999999999999999999987543334689998875
Q ss_pred cccCCCCCCeeEecHhhhcceEEEEECCCCeEEEEec
Q 010251 477 FDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEA 513 (514)
Q Consensus 477 ~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a 513 (514)
.+ .++.||||++|||++|++||++++|||||+.
T Consensus 297 ~~----~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 297 SS----GIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp CT----TTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred CC----CCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 42 3468999999999999999999999999984
No 18
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.2e-58 Score=472.89 Aligned_cols=311 Identities=30% Similarity=0.469 Sum_probs=267.9
Q ss_pred ccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCcccccCCcccCCCCCceee-cCeEEEEEeccce-EEEEEE
Q 010251 84 FMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKR-NGTSAAIQYGTGA-ISGFFS 161 (514)
Q Consensus 84 ~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~-~~~~~~~~Yg~gs-~~G~~~ 161 (514)
+.+.+|+++|+||||||+++|+|||||+++||+|..|. ...| .++.|+|++|+||+. .++.|.+.|++|+ +.|.++
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~-~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~~ 89 (329)
T 1oew_A 12 SLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETT-ASEV-XQTIYTPSKSTTAKLLSGATWSISYGDGSSSSGDVY 89 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-GGGC--CCCBCGGGCTTCEEEEEEEEEEECTTSCEEEEEEE
T ss_pred CCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCC-cccc-ccCccCCccCccceecCCCeEEEEeCCCCcEEEEEE
Confidence 35789999999999999999999999999999999996 3355 788999999999998 6899999999998 899999
Q ss_pred EEEEEECCEEecceeEEEEEecccccccccccceEEeeccccccc---CCCCchHHHHHHcCCCCCCEEEEEecCCCCCC
Q 010251 162 QDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI---GKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGE 238 (514)
Q Consensus 162 ~D~v~igg~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~---~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~ 238 (514)
+|+|++++..++++.||++....+..+....++||||||++..+. ....+++++|+++ |.+++||+||.+.
T Consensus 90 ~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~---- 163 (329)
T 1oew_A 90 TDTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS--LDSPVFTADLGYH---- 163 (329)
T ss_dssp EEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTT--SSSSEEEEECCSS----
T ss_pred EEEEEECCEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHHh--ccCcEEEEEccCC----
Confidence 999999999999999999998665433335789999999988775 2467899999987 8899999999874
Q ss_pred CCcEEEECCcCCCCcccceEEEecc-cCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHHHHHHHHHHhccC
Q 010251 239 EGGEIVFGGVDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS 317 (514)
Q Consensus 239 ~~G~L~fGg~D~s~~~g~l~~~pl~-~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~~~~~l~~~i~~~ 317 (514)
..|+|+|||+|+++|.|+++|+|+. ..++|.|.+++|.|+++.+. ..+..++|||||+++++|++++++|++++.+.
T Consensus 164 ~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a 241 (329)
T 1oew_A 164 APGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFK--STSIDGIADTGTTLLYLPATVVSAYWAQVSGA 241 (329)
T ss_dssp SCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCE--EEEEEEEECTTCCSEEECHHHHHHHHTTSTTC
T ss_pred CCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeecc--CCCceEEEeCCCCCEECCHHHHHHHHHhCCCc
Confidence 2899999999999999999999996 67899999999999997653 35678999999999999999999999887433
Q ss_pred cccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCcccchhhhHHHHH
Q 010251 318 GVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIW 397 (514)
Q Consensus 318 ~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (514)
.
T Consensus 242 ~------------------------------------------------------------------------------- 242 (329)
T 1oew_A 242 K------------------------------------------------------------------------------- 242 (329)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred E-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHhhchhhHHHHhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceEEeccCccceeEeeeEec
Q 010251 398 MQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAF 477 (514)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~y~~~~~~~~~~~C~~~~~~~ 477 (514)
.....+.|.++|+ ..+|+|+|+|||++++|++++|+++....+...|++.|+..
T Consensus 243 ------------------------~~~~~g~~~~~C~--~~~P~i~f~fgg~~~~ip~~~~~~~~~~~~~~~C~~~i~~~ 296 (329)
T 1oew_A 243 ------------------------SSSSVGGYVFPCS--ATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSS 296 (329)
T ss_dssp ------------------------EETTTTEEEEETT--CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEES
T ss_pred ------------------------EcCCCCEEEEECC--CCCCcEEEEECCEEEEECHHHeeeeecCCCCCeEEEEEEeC
Confidence 0012467889998 47999999999999999999999875433346899988754
Q ss_pred ccCCCCCCeeEecHhhhcceEEEEEC-CCCeEEEEec
Q 010251 478 DVAPPRGPLWILGDVFMGRYHTVFDY-GNLSIGFAEA 513 (514)
Q Consensus 478 ~~~~~~~~~~iLG~~fl~~~y~vfD~-~~~rIGfa~a 513 (514)
+ .++.||||++|||++|++||+ +++|||||++
T Consensus 297 ~----~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 297 A----GIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp T----TTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred C----CCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 3 346899999999999999999 9999999984
No 19
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.2e-57 Score=467.35 Aligned_cols=313 Identities=28% Similarity=0.475 Sum_probs=272.8
Q ss_pred ceEeceeccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCC--CCCCcccccCCcccCCCCCceeecCeEEEEEeccc
Q 010251 77 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAK--CYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTG 154 (514)
Q Consensus 77 ~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~--C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~g 154 (514)
..+||.|. +.+|+++|+||||||+++|++||||+++||++.. |..+..|..++.|++++|+||+..++.|.+.|++|
T Consensus 3 i~~~l~~~-~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g 81 (339)
T 3fv3_A 3 ISLSLINE-GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLGAAFTIRYGDG 81 (339)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEEEEEEEEECTTS
T ss_pred eeeEEEcC-CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeCCceEEEEECCC
Confidence 45788876 6789999999999999999999999999999654 65445899999999999999999999999999999
Q ss_pred -eEEEEEEEEEEEECCEEecceeEEEEEecccccccccccceEEeeccccccc----------CCCCchHHHHHHcCCCC
Q 010251 155 -AISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI----------GKAIPVWYNMLDQGLVK 223 (514)
Q Consensus 155 -s~~G~~~~D~v~igg~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~----------~~~~~~~~~L~~qg~i~ 223 (514)
.+.|.+++|+|+|++..++++.||++..... .+||||||++..+. ....+++++|++||.|+
T Consensus 82 s~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~-------~~GilGLg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~ 154 (339)
T 3fv3_A 82 STSQGTWGKDTVTINGVSITGQQIADVTQTSV-------DQGILGIGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIR 154 (339)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEEEEEEEESS-------SSCEEECSCGGGCCCBCTTSCBCSCCCCCHHHHHHHTTSCS
T ss_pred ceEEEEEEEEEEEECCEEECceEEEEEEecCC-------CceeEEecCccccccccccccccCccCCcHHHHHHHCCCCC
Confidence 5899999999999999999999999987543 49999999988753 23456999999999999
Q ss_pred CCEEEEEecCCCCCCCCcEEEECCcCCCCcccceEEEecccCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccC
Q 010251 224 EPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGP 303 (514)
Q Consensus 224 ~~~FSl~l~~~~~~~~~G~L~fGg~D~s~~~g~l~~~pl~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp 303 (514)
+++||+||.+.. ...|+|+|||+|+++|.|+++|+|+....+|.|.+++|.++++.+.. ...++|||||+++++|
T Consensus 155 ~~~fsl~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~---~~~~iiDSGtt~~~lP 229 (339)
T 3fv3_A 155 TNAYSLYLNSPS--AETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISLASVNLKGSSFSF---GDGALLDSGTTLTYFP 229 (339)
T ss_dssp SSEEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEEEEEEESSCEEEE---EEEEEECTTBSSEEEC
T ss_pred CceEEEEECCCC--CCCeEEEEeeechHHeecceEEEecccCccEEEEEEEEEECCEeecC---CccEEEeCCCCCEecC
Confidence 999999998753 34899999999999999999999999889999999999999988753 4789999999999999
Q ss_pred HHHHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCC
Q 010251 304 TTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVH 383 (514)
Q Consensus 304 ~~~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (514)
++++++|++++++.. +
T Consensus 230 ~~~~~~i~~~~~~~~---------------------------------------~------------------------- 245 (339)
T 3fv3_A 230 SDFAAQLADKAGARL---------------------------------------V------------------------- 245 (339)
T ss_dssp HHHHHHHHHHHTCEE---------------------------------------E-------------------------
T ss_pred HHHHHHHHHHcCCEE---------------------------------------c-------------------------
Confidence 999999999998650 0
Q ss_pred CcccchhhhHHHHHHHHHHhhchhhHHHHhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEE-CCEEEEeCcCcceEEe
Q 010251 384 DSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTI-GGKVFDLAPNEYVLEV 462 (514)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~f-gg~~~~l~~~~y~~~~ 462 (514)
..+...+.|.++|+. ..+|+|+|+| +|++++|++++|+++.
T Consensus 246 -------------------------------------~~~~~~~~~~~~C~~-~~~p~i~f~f~~g~~~~v~~~~~~~~~ 287 (339)
T 3fv3_A 246 -------------------------------------QVARDQYLYFIDCNT-DTSGTTVFNFGNGAKITVPNTEYVYQN 287 (339)
T ss_dssp -------------------------------------EEETTEEEEEECTTC-CCCSEEEEEETTSCEEEEEGGGGEEEC
T ss_pred -------------------------------------cccccCceEEEecCC-CCCCcEEEEECCCCEEEECHHHheeeC
Confidence 000124568899996 4689999999 5899999999999975
Q ss_pred ccCccceeEeeeEecccCCCCCCeeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 463 GEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 463 ~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
.. ..|.++|.. .+.||||++|||++|++||++++|||||+++
T Consensus 288 ~~---~~C~~~i~~-------~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~ 329 (339)
T 3fv3_A 288 GD---GTCLWGIQP-------SDDTILGDNFLRHAYLLYNLDANTISIAQVK 329 (339)
T ss_dssp SS---SCEEESEEE-------CSSCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CC---CeEEEEEEe-------CCcEEeChHHHhCEEEEEECCCCEEEEEecC
Confidence 33 579988875 2479999999999999999999999999985
No 20
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=1.4e-57 Score=466.02 Aligned_cols=309 Identities=28% Similarity=0.470 Sum_probs=270.6
Q ss_pred ceEeceeccCceEEEEEEEcCCCceEEEEecCCCCceeeeCC--CCCC------CcccccCCcccCCCCCceeecCeEEE
Q 010251 77 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSA--KCYF------SVSCYFHSKYKSSHSSTYKRNGTSAA 148 (514)
Q Consensus 77 ~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~--~C~~------~~~C~~~~~f~~~~SsT~~~~~~~~~ 148 (514)
..+||.|. +.+|+++|+||||||+++|+|||||+++||++. .|.. ...|..++.|+|++|+||+..++.|.
T Consensus 3 ~~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (334)
T 1j71_A 3 VPTTLINE-GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLNQDFS 81 (334)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEecC-CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCCCceE
Confidence 45788886 789999999999999999999999999999976 6752 23798899999999999999999999
Q ss_pred EEeccce-EEEEEEEEEEEECCEEecceeEEEEEecccccccccccceEEeecccccccC--CCCchHHHHHHcCCCCCC
Q 010251 149 IQYGTGA-ISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIG--KAIPVWYNMLDQGLVKEP 225 (514)
Q Consensus 149 ~~Yg~gs-~~G~~~~D~v~igg~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~--~~~~~~~~L~~qg~i~~~ 225 (514)
+.|++|+ +.|.+++|+|++++..++++.||++.... .++||||||++..+.. ...+++++|++||.|+++
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~ 154 (334)
T 1j71_A 82 IEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVTTTS-------VDQGIMGIGFTADEAGYNLYDNVPVTLKKQGIINKN 154 (334)
T ss_dssp EEBTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGSSTTCCCCCHHHHHHHTTSCSSS
T ss_pred EEECCCCEEEEEEEEEEEEECCEEEccEEEEEEEecC-------CCccEEEEcCCcccCccccCCcHHHHHHHCCCCCcc
Confidence 9999997 68999999999999999999999998642 4689999999876542 456789999999999999
Q ss_pred EEEEEecCCCCCCCCcEEEECCcCCCCcccceEEEecccCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHH
Q 010251 226 VFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 305 (514)
Q Consensus 226 ~FSl~l~~~~~~~~~G~L~fGg~D~s~~~g~l~~~pl~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~ 305 (514)
+||+||.+.. ...|+|+|||+|+++|.|+++|+|+.+..+|.|.+++|.|+++.+. .+..++|||||+++++|++
T Consensus 155 ~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~~iiDSGTt~~~lP~~ 229 (334)
T 1j71_A 155 AYSLYLNSED--ASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVS---TNADVVLDSGTTITYFSQS 229 (334)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEE---EEEEEEECTTCSSEEECHH
T ss_pred EEEEEeCCCC--CCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECCEecc---CCccEEEeCCCCcEecCHH
Confidence 9999998752 3489999999999999999999999988999999999999998875 3478999999999999999
Q ss_pred HHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCc
Q 010251 306 IITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDS 385 (514)
Q Consensus 306 ~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (514)
++++|.+++++..
T Consensus 230 ~~~~l~~~~~~~~------------------------------------------------------------------- 242 (334)
T 1j71_A 230 TADKFARIVGATW------------------------------------------------------------------- 242 (334)
T ss_dssp HHHHHHHHHTCEE-------------------------------------------------------------------
T ss_pred HHHHHHHHcCCcc-------------------------------------------------------------------
Confidence 9999999997650
Q ss_pred ccchhhhHHHHHHHHHHhhchhhHHHHhhhhccccCCCCCCCCee-eeCCCCCCCCcEEEEE-CCEEEEeCcCcceEEec
Q 010251 386 AMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESA-VDCDNLSSMPNVSFTI-GGKVFDLAPNEYVLEVG 463 (514)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~-~~C~~~~~~P~l~f~f-gg~~~~l~~~~y~~~~~ 463 (514)
....+.|. ++|+ .+|+|+|+| +|++++|++++|+++..
T Consensus 243 -------------------------------------~~~~~~~~~~~C~---~~p~i~f~f~~g~~~~i~~~~y~~~~~ 282 (334)
T 1j71_A 243 -------------------------------------DSRNEIYRLPSCD---LSGDAVFNFDQGVKITVPLSELILKDS 282 (334)
T ss_dssp -------------------------------------ETTTTEEECSSSC---CCSEEEEEESTTCEEEEEGGGGEEECS
T ss_pred -------------------------------------cCCCceEEEEcCC---CCCceEEEEcCCcEEEECHHHheeecC
Confidence 01134677 8998 489999999 79999999999999854
Q ss_pred cCccceeEeeeEecccCCCCCCeeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 464 EGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 464 ~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
++ ..|++.|... +.||||++|||++|++||++++|||||+++
T Consensus 283 ~~--~~C~~~i~~~-------~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (334)
T 1j71_A 283 DS--SICYFGISRN-------DANILGDNFLRRAYIVYDLDDKTISLAQVK 324 (334)
T ss_dssp SS--SCEEESEEEC-------TTCEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CC--CeeEEEEeEC-------CCcEEChHhhccEEEEEECCCCEEEEEecC
Confidence 33 3599888743 359999999999999999999999999985
No 21
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=3.5e-57 Score=461.42 Aligned_cols=309 Identities=29% Similarity=0.450 Sum_probs=268.0
Q ss_pred cCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCcccccCCcccCCCCCceeecCeEEEEEeccce-EEEEEEEE
Q 010251 85 MDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA-ISGFFSQD 163 (514)
Q Consensus 85 ~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs-~~G~~~~D 163 (514)
.+.+|+++|+|| ||+++|+|||||+++||+|..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ +.|.+++|
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 87 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELP-SSEQTGHDLYTPSSSA-TKLSGYSWDISYGDGSSASGDVYRD 87 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSC-HHHHTTSCCCBCCSSC-EECTTCBEEEECSSSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCC-ccccCCCCCCCchhcC-CccCCCEEEEEeCCCCEEEEEEEEe
Confidence 578999999999 89999999999999999999996 3456788999999999 7778999999999998 89999999
Q ss_pred EEEECCEEecceeEEEEEecccccccccccceEEeeccccccc---CCCCchHHHHHHcCCCCCCEEEEEecCCCCCCCC
Q 010251 164 NVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI---GKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEG 240 (514)
Q Consensus 164 ~v~igg~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~---~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~ 240 (514)
+|++++..++++.||++....+..+....++||||||++..+. ...++++++|+++ |.+++||+||.+. ..
T Consensus 88 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~l~~~----~~ 161 (325)
T 1ibq_A 88 TVTVGGVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQ--LDSPLFAVQLKHD----AP 161 (325)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEEEETT----EE
T ss_pred EEEECCEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHHh--cCCcEEEEEecCC----CC
Confidence 9999999999999999998765433335789999999988775 3577899999987 8899999999874 28
Q ss_pred cEEEECCcCCCCcccceEEEecc-cCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHHHHHHHHHHhccCcc
Q 010251 241 GEIVFGGVDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGV 319 (514)
Q Consensus 241 G~L~fGg~D~s~~~g~l~~~pl~-~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~~~~~l~~~i~~~~~ 319 (514)
|+|+|||+|+++|.|+++|+|+. ..++|.|.+++|.|+++.+ +..+..+||||||+++++|++++++|.+++.+..
T Consensus 162 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~- 238 (325)
T 1ibq_A 162 GVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSS--SSSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQ- 238 (325)
T ss_dssp EEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCC--BSCCEEEEECTTCCSEEECHHHHHHHHTTSTTCB-
T ss_pred ceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeec--cCCCceEEEeCCCCcEeCCHHHHHHHHHhCCCce-
Confidence 99999999999999999999996 6789999999999999865 3567899999999999999999999999884320
Q ss_pred cccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCcccchhhhHHHHHHH
Q 010251 320 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQ 399 (514)
Q Consensus 320 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (514)
T Consensus 239 -------------------------------------------------------------------------------- 238 (325)
T 1ibq_A 239 -------------------------------------------------------------------------------- 238 (325)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhchhhHHHHhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceEEeccCccceeEeeeEeccc
Q 010251 400 NKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDV 479 (514)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~ 479 (514)
.....+.|.++|+ ..+|+|+|+|+|++++|++++|+++..+.+...|++.|+..+
T Consensus 239 ----------------------~~~~~g~~~~~C~--~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~~~C~~~i~~~~- 293 (325)
T 1ibq_A 239 ----------------------ESYEAGGYVFSCS--TDLPDFTVVIGDYKAVVPGKYINYAPVSTGSSTCYGGIQSNS- 293 (325)
T ss_dssp ----------------------CCSSSSSCEEETT--CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEECT-
T ss_pred ----------------------EcCcCCeEEEEcC--CCCCcEEEEECCEEEEECHHHhcccccCCCCCeEEEEEEcCC-
Confidence 0112466889998 479999999999999999999998754323468999887542
Q ss_pred CCCCCCeeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 480 APPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 480 ~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
.++.||||++|||++|+|||++++|||||++|
T Consensus 294 ---~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 294 ---GLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp ---TTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ---CCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 34689999999999999999999999999986
No 22
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=2.1e-57 Score=466.11 Aligned_cols=314 Identities=26% Similarity=0.441 Sum_probs=271.1
Q ss_pred ceEeceeccCceEEEEEEEcCCCceEEEEecCCCCceeeeCC--CCCC------CcccccCCcccCCCCCceeecCeEEE
Q 010251 77 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSA--KCYF------SVSCYFHSKYKSSHSSTYKRNGTSAA 148 (514)
Q Consensus 77 ~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~--~C~~------~~~C~~~~~f~~~~SsT~~~~~~~~~ 148 (514)
..++|.| .+.+|+++|+||||||+++|+|||||+++||++. .|.. ...|..++.|+|++|+||+..++.|.
T Consensus 3 v~~~l~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 2qzx_A 3 VAVTLHN-EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLNTRFD 81 (342)
T ss_dssp EEEEEEE-CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEec-CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCCCcEE
Confidence 4578888 5789999999999999999999999999999866 6742 24788899999999999999999999
Q ss_pred EEeccce-EEEEEEEEEEEECCEEecceeEEEEEecccccccccccceEEeecccccccC--CCCchHHHHHHcCCCCCC
Q 010251 149 IQYGTGA-ISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIG--KAIPVWYNMLDQGLVKEP 225 (514)
Q Consensus 149 ~~Yg~gs-~~G~~~~D~v~igg~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~--~~~~~~~~L~~qg~i~~~ 225 (514)
+.|++|+ +.|.+++|+|++++..++++.||++.... ..+||||||++..+.. ...+++++|++||.|+++
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~ 154 (342)
T 2qzx_A 82 IKYGDGSYAKGKLYKDTVGIGGVSVRDQLFANVWSTS-------ARKGILGIGFQSGEATEFDYDNLPISLRNQGIIGKA 154 (342)
T ss_dssp EECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEC-------SSSCEEECSCGGGCSSSSCCCCHHHHHHHTTSSSSS
T ss_pred EEeCCCCeEEEEEEEEEEEECCEEecceEEEEEEecC-------CCcCEEEEccccccCCCccCccHHHHHHHCCCcCcc
Confidence 9999998 68999999999999999999999998642 4689999999877542 355799999999999999
Q ss_pred EEEEEecCCCCCCCCcEEEECCcCCCCcccceEEEecccCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHH
Q 010251 226 VFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 305 (514)
Q Consensus 226 ~FSl~l~~~~~~~~~G~L~fGg~D~s~~~g~l~~~pl~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~ 305 (514)
+||+||.+.. ...|+|+|||+|+++|.|+++|+|+.+..+|.|.+++|.|+++.+. .+..++|||||+++++|++
T Consensus 155 ~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~aiiDSGTt~~~lP~~ 229 (342)
T 2qzx_A 155 AYSLYLNSAE--ASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVRGRNVD---ANTNVLLDSGTTISYFTRS 229 (342)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEE---EEEEEEECTTCSSEEECHH
T ss_pred EEEEEeCCCC--CCCeEEEECccchhhEecceEEEeccCCceEEEEEeEEEECCEecC---CCcCEEEeCCCCCEEcCHH
Confidence 9999998752 3489999999999999999999999988899999999999998875 3468999999999999999
Q ss_pred HHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCc
Q 010251 306 IITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDS 385 (514)
Q Consensus 306 ~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (514)
++++|.+++++... +
T Consensus 230 ~~~~l~~~~~~~~~-------------------------------------~---------------------------- 244 (342)
T 2qzx_A 230 IVRNILYAIGAQMK-------------------------------------F---------------------------- 244 (342)
T ss_dssp HHHHHHHHHTCEEE-------------------------------------E----------------------------
T ss_pred HHHHHHHHhCCeee-------------------------------------e----------------------------
Confidence 99999999976510 0
Q ss_pred ccchhhhHHHHHHHHHHhhchhhHHHHhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEE-CCEEEEeCcCcceEEec-
Q 010251 386 AMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTI-GGKVFDLAPNEYVLEVG- 463 (514)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~f-gg~~~~l~~~~y~~~~~- 463 (514)
.+...+.|.++|+ .+|+|+|+| +|++++|++++|+++..
T Consensus 245 ------------------------------------~~~~~~~~~~~C~---~~p~i~f~f~~g~~~~i~~~~~~~~~~~ 285 (342)
T 2qzx_A 245 ------------------------------------DSAGNKVYVADCK---TSGTIDFQFGNNLKISVPVSEFLFQTYY 285 (342)
T ss_dssp ------------------------------------CTTSCEEEEECTT---CCCEEEEEETTTEEEEEEGGGGEECCBC
T ss_pred ------------------------------------ccCCCcEEEEECC---CCCcEEEEECCCcEEEEcHHHhcccccc
Confidence 0011336889998 489999999 79999999999999743
Q ss_pred --cCccceeEeeeEecccCCCCCCeeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 464 --EGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 464 --~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
......|++.+... +.||||++|||++|++||++++|||||+++
T Consensus 286 ~~~~~~~~C~~~i~~~-------~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 331 (342)
T 2qzx_A 286 TSGKPFPKCEVRIRES-------EDNILGDNFLRSAYVVYNLDDKKISMAPVK 331 (342)
T ss_dssp TTSCBCSSEEESEEEC-------SSCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred cCCCCCCccEEEEecC-------CCcEeChHhhhcEEEEEECCCCEEEEEeeC
Confidence 12235899988743 259999999999999999999999999985
No 23
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=2.8e-57 Score=461.74 Aligned_cols=306 Identities=29% Similarity=0.445 Sum_probs=266.6
Q ss_pred cCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCcccccCCcccCCCCCceeecCeEEEEEeccce-EEEEEEEE
Q 010251 85 MDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA-ISGFFSQD 163 (514)
Q Consensus 85 ~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs-~~G~~~~D 163 (514)
.+.+|+++|+|| ||+++|+|||||+++||+|..|. ...|..++.|+|++|+ ++..++.|.++|++|+ +.|.+++|
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 88 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTP-SSERSGHDYYTPGSSA-QKIDGATWSISYGDGSSASGDVYKD 88 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTCCCBCCCTTC-EEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCC-cccccCCCCCCccccC-CccCCCeEEEEcCCCCeEEEEEEEE
Confidence 578999999999 79999999999999999999996 3457788999999999 8778899999999998 89999999
Q ss_pred EEEECCEEecceeEEEEEecccccccccccceEEeeccccccc---CCCCchHHHHHHcCCCCCCEEEEEecCCCCCCCC
Q 010251 164 NVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI---GKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEG 240 (514)
Q Consensus 164 ~v~igg~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~---~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~ 240 (514)
+|++++..++++.||++....+..+....++||||||++..+. ...++++++|++| |.+++||+||.+. ..
T Consensus 89 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~L~~~----~~ 162 (323)
T 1izd_A 89 KVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS--LSEPIFAVALKHN----AP 162 (323)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEECCTT----SC
T ss_pred EEEECCEEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHh--ccCcEEEEEccCC----CC
Confidence 9999999999999999998765333335789999999998775 3577899999987 8899999999874 27
Q ss_pred cEEEECCcCCCCcccceEEEecc-cCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHHHHHHHHHHhccCcc
Q 010251 241 GEIVFGGVDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGV 319 (514)
Q Consensus 241 G~L~fGg~D~s~~~g~l~~~pl~-~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~~~~~l~~~i~~~~~ 319 (514)
|+|+|||+|+++|.|+++|+|+. ..++|.|.+++|.|++ .+ +..+..+||||||+++++|++++++|.+++.+..
T Consensus 163 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~--~~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~- 238 (323)
T 1izd_A 163 GVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DS--SSDSITGIADTGTTLLLLDDSIVDAYYEQVNGAS- 238 (323)
T ss_dssp EEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EE--ECCCEEEEECTTCCSEEECHHHHHHHHTTSTTCE-
T ss_pred CEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-cc--cCCCceEEEeCCCcceeCCHHHHHHHHHhCCCcE-
Confidence 99999999999999999999996 6789999999999999 44 4567899999999999999999999998874320
Q ss_pred cccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCcccchhhhHHHHHHH
Q 010251 320 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQ 399 (514)
Q Consensus 320 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (514)
T Consensus 239 -------------------------------------------------------------------------------- 238 (323)
T 1izd_A 239 -------------------------------------------------------------------------------- 238 (323)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhchhhHHHHhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceEEeccCccceeEeeeEeccc
Q 010251 400 NKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDV 479 (514)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~ 479 (514)
.....+.|.++|+ ..+|+|+|+|||++++|++++|+++... ...|+++|+..+
T Consensus 239 ----------------------~~~~~g~~~~~C~--~~~P~i~f~fgg~~~~i~~~~~~~~~~~--~~~C~~~i~~~~- 291 (323)
T 1izd_A 239 ----------------------YDSSQGGYVFPSS--ASLPDFSVTIGDYTATVPGEYISFADVG--NGQTFGGIQSNS- 291 (323)
T ss_dssp ----------------------EETTTTEEEEETT--CCCCCEEEEETTEEEEECHHHHEEEECS--TTEEEESEEECT-
T ss_pred ----------------------EcCcCCEEEEECC--CCCceEEEEECCEEEecCHHHeEEecCC--CCeEEEEEEcCC-
Confidence 0012467899998 4799999999999999999999987532 368999887643
Q ss_pred CCCCCCeeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 480 APPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 480 ~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
.++.||||++|||++|+|||++++|||||++|
T Consensus 292 ---~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 292 ---GIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp ---TTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ---CCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 34689999999999999999999999999986
No 24
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=2.9e-57 Score=461.60 Aligned_cols=306 Identities=27% Similarity=0.461 Sum_probs=265.1
Q ss_pred cCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCcccccCCcccCCCCCceeecCeEEEEEeccce-EEEEEEEE
Q 010251 85 MDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA-ISGFFSQD 163 (514)
Q Consensus 85 ~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs-~~G~~~~D 163 (514)
.+.+|+++|+|| ||+++|+|||||+++||+|..|. ...|..++.|+|++|+ ++..++.|.++|++|+ +.|.+++|
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 88 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELP-ASQQSGHSVYNPSATG-KELSGYTWSISYGDGSSASGNVFTD 88 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCHHHHC-EEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-chhccCCCCCCcccCC-cccCCCeEEEEeCCCCeEEEEEEEE
Confidence 578999999999 89999999999999999999996 3457788999999999 8878899999999998 89999999
Q ss_pred EEEECCEEecceeEEEEEecccccccccccceEEeecccccccC---CCCchHHHHHHcCCCCCCEEEEEecCCCCCCCC
Q 010251 164 NVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIG---KAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEG 240 (514)
Q Consensus 164 ~v~igg~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~---~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~ 240 (514)
+|++++..++++.||++....+..+....++||||||++..+.. ..++++++|+++ |.+++||+||.+. ..
T Consensus 89 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~----~~ 162 (323)
T 1bxo_A 89 SVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS--LAQPLFAVALKHQ----QP 162 (323)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG--BSSSEEEEECCSS----SC
T ss_pred EEEECCEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHh--cCCcEEEEEEeCC----CC
Confidence 99999999999999999986553333357899999999887652 467899999987 8999999999874 27
Q ss_pred cEEEECCcCCCCcccceEEEecc-cCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHHHHHHHHHHhccCcc
Q 010251 241 GEIVFGGVDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGV 319 (514)
Q Consensus 241 G~L~fGg~D~s~~~g~l~~~pl~-~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~~~~~l~~~i~~~~~ 319 (514)
|+|+|||+|+++|.|+++|+|+. ..++|.|.+++|.|++ . +..+..+||||||+++++|++++++|.+++.+..
T Consensus 163 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~---~~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~- 237 (323)
T 1bxo_A 163 GVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS-Q---SGDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQ- 237 (323)
T ss_dssp EEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT-E---EEEEEEEEECTTCSSEEECHHHHHHHHTTSTTCE-
T ss_pred ceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC-c---cCCCceEEEeCCCCceeCCHHHHHHHHHhCCCce-
Confidence 99999999999999999999996 6789999999999999 2 3456899999999999999999999999884330
Q ss_pred cccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCcccchhhhHHHHHHH
Q 010251 320 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQ 399 (514)
Q Consensus 320 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (514)
+
T Consensus 238 -------------------------------------~------------------------------------------ 238 (323)
T 1bxo_A 238 -------------------------------------Q------------------------------------------ 238 (323)
T ss_dssp -------------------------------------E------------------------------------------
T ss_pred -------------------------------------E------------------------------------------
Confidence 0
Q ss_pred HHHhhchhhHHHHhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceEEeccCccceeEeeeEeccc
Q 010251 400 NKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDV 479 (514)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~ 479 (514)
....+.|.++|+ ..+|+|+|+|+|++++|++++|+++... +...|+++|+..+
T Consensus 239 -----------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~l~~~~~~~~~~~-~~~~C~~~i~~~~- 291 (323)
T 1bxo_A 239 -----------------------DSNAGGYVFDCS--TNLPDFSVSISGYTATVPGSLINYGPSG-DGSTCLGGIQSNS- 291 (323)
T ss_dssp -----------------------ETTTTEEEECTT--CCCCCEEEEETTEEEEECHHHHEEEECS-SSSCEEESEEECT-
T ss_pred -----------------------cCcCCEEEEECC--CCCceEEEEECCEEEEECHHHeEEeccC-CCCeEEEEEECCC-
Confidence 012567899999 4799999999999999999999987532 2368999887543
Q ss_pred CCCCCCeeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 480 APPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 480 ~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
.++.||||++|||++|+|||++++|||||++|
T Consensus 292 ---~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 292 ---GIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp ---TCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ---CCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 34689999999999999999999999999986
No 25
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=8.3e-57 Score=461.55 Aligned_cols=315 Identities=28% Similarity=0.448 Sum_probs=269.0
Q ss_pred ceEeceeccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCC--CC------CCcccccCCcccCCCCCceeecCeEEE
Q 010251 77 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAK--CY------FSVSCYFHSKYKSSHSSTYKRNGTSAA 148 (514)
Q Consensus 77 ~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~--C~------~~~~C~~~~~f~~~~SsT~~~~~~~~~ 148 (514)
..+++.+. +.+|+++|+||||||+++|++||||+++||++.. |. ....|..++.|++++|+|++..++.|.
T Consensus 3 v~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 3pvk_A 3 VPVTLHNE-QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLNTPFK 81 (342)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred cceEEecC-CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecCCeEE
Confidence 35677774 7899999999999999999999999999998764 63 235898899999999999999999999
Q ss_pred EEeccce-EEEEEEEEEEEECCEEecceeEEEEEecccccccccccceEEeecccccccC-CCCchHHHHHHcCCCCCCE
Q 010251 149 IQYGTGA-ISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIG-KAIPVWYNMLDQGLVKEPV 226 (514)
Q Consensus 149 ~~Yg~gs-~~G~~~~D~v~igg~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~-~~~~~~~~L~~qg~i~~~~ 226 (514)
+.|++|+ +.|.+++|+|+|++..++++.||++.... ..+||||||++..+.. ...+++++|++||.|++++
T Consensus 82 i~Yg~gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~L~~qg~i~~~~ 154 (342)
T 3pvk_A 82 IGYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDSTS-------IDQGILGVGYKTNEAGGSYDNVPVTLKKQGVIAKNA 154 (342)
T ss_dssp EECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGCSSCSSCCHHHHHHHTTSSSSSE
T ss_pred EEecCCCeEEEEEEEEEEEECCEEecceEEEEEEccC-------CCccEEEecCccccccccCCcHHHHHHhcCCCCCce
Confidence 9999998 89999999999999999999999998643 4699999999876543 3567999999999999999
Q ss_pred EEEEecCCCCCCCCcEEEECCcCCCCcccceEEEecccCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHHH
Q 010251 227 FSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTI 306 (514)
Q Consensus 227 FSl~l~~~~~~~~~G~L~fGg~D~s~~~g~l~~~pl~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~~ 306 (514)
||+||.+.. ...|+|+|||+|+++|.|+++|+|+....+|.|.+++|.++++.+.. .+..++|||||+++++|+++
T Consensus 155 fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~--~~~~~iiDSGtt~~~lP~~~ 230 (342)
T 3pvk_A 155 YSLYLNSPD--AATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTINT--DNVDVLLDSGTTITYLQQDL 230 (342)
T ss_dssp EEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEE--EEEEEEECTTCSSEEECHHH
T ss_pred EEEEeCCCC--CCCcEEEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEecC--CCceEEEeCCCCCeecCHHH
Confidence 999998753 23799999999999999999999999888999999999999998753 34789999999999999999
Q ss_pred HHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCcc
Q 010251 307 ITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSA 386 (514)
Q Consensus 307 ~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (514)
+++|.+++++...
T Consensus 231 ~~~i~~~~~~~~~------------------------------------------------------------------- 243 (342)
T 3pvk_A 231 ADQIIKAFNGKLT------------------------------------------------------------------- 243 (342)
T ss_dssp HHHHHHHTTCEEE-------------------------------------------------------------------
T ss_pred HHHHHHHcCCeec-------------------------------------------------------------------
Confidence 9999999977610
Q ss_pred cchhhhHHHHHHHHHHhhchhhHHHHhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEEC-CEEEEeCcCcceEEeccC
Q 010251 387 MCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIG-GKVFDLAPNEYVLEVGEG 465 (514)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fg-g~~~~l~~~~y~~~~~~~ 465 (514)
......+.|.++|+ ..|+|+|+|+ |.+++|++++|+++....
T Consensus 244 ----------------------------------~~~~~~~~~~~~C~---~~p~i~f~f~~g~~~~vp~~~~~~~~~~~ 286 (342)
T 3pvk_A 244 ----------------------------------QDSNGNSFYEVDCN---LSGDVVFNFSKNAKISVPASEFAASLQGD 286 (342)
T ss_dssp ----------------------------------ECTTSCEEEEECSC---CCSEEEEEESTTCEEEEEGGGGEEC----
T ss_pred ----------------------------------ccCCCceEEEEecC---CCCceEEEECCCCEEEEcHHHheeecccc
Confidence 00011235899999 4699999997 899999999999974321
Q ss_pred ---ccceeEeeeEecccCCCCCCeeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 466 ---VAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 466 ---~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
....|++.+... +.||||++|||++|++||++++|||||+++
T Consensus 287 ~g~~~~~C~~~i~~~-------~~~ilG~~fl~~~y~vfD~~~~~igfA~~~ 331 (342)
T 3pvk_A 287 DGQPYDKCQLLFDVN-------DANILGDNFLRSAYIVYDLDDNEISLAQVK 331 (342)
T ss_dssp ------CEEESEEEC-------TTCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCcCCeeEEEEeeC-------CCeEeCHHHHhcEEEEEECCCCEEEEEecC
Confidence 126799988752 479999999999999999999999999985
No 26
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=1.7e-56 Score=459.06 Aligned_cols=312 Identities=26% Similarity=0.475 Sum_probs=266.1
Q ss_pred ceEeceeccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCcccccCCcccCCCCCceeecCeEEEEEeccceE
Q 010251 77 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAI 156 (514)
Q Consensus 77 ~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~ 156 (514)
..+||.|+ +.+|+++|+||||||+++|+|||||+++||+|. +.|+|++|+++ .++.|.+.|++|++
T Consensus 3 ~~~~l~n~-~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss~~--~~~~~~i~Yg~Gs~ 68 (340)
T 1wkr_A 3 GSVPATNQ-LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTSSA--TSDKVSVTYGSGSF 68 (340)
T ss_dssp EEEEEEEC-SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTCEE--EEEEEEEECSSCEE
T ss_pred ccEeeecc-CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCccc--cCceEEEEECCcEE
Confidence 46899997 679999999999999999999999999999752 56898887754 57899999999999
Q ss_pred EEEEEEEEEEECCEEecceeEEEEEecccccccccccceEEeeccccccc--------CCCCchHHHHHHcCCCCCCEEE
Q 010251 157 SGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI--------GKAIPVWYNMLDQGLVKEPVFS 228 (514)
Q Consensus 157 ~G~~~~D~v~igg~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~--------~~~~~~~~~L~~qg~i~~~~FS 228 (514)
+|.+++|+|+|++..++++.|||+....+ | ..++||||||++..+. ...++++++|++||+|++++||
T Consensus 69 ~G~~~~Dtv~~g~~~v~~~~fg~~~~~~~--~--~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS 144 (340)
T 1wkr_A 69 SGTEYTDTVTLGSLTIPKQSIGVASRDSG--F--DGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLA 144 (340)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEES--C--TTCSEEEECSCGGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEE
T ss_pred EEEEEEEEEEECCEEEcceEEEEEEccCC--C--cCCCcEEECCccccccccccccccccCCCHHHHHHHcCCCCCCEEE
Confidence 99999999999999999999999998644 3 3589999999988765 3467899999999999999999
Q ss_pred EEecCCC-CCCCCcEEEECCcCCCCcccceEEEeccc----CCceEEEEceEEECC-eeecccCCCceEEEcCCCCCccc
Q 010251 229 FWLNRDI-EGEEGGEIVFGGVDPDHYKGEHTYVPVTK----KGYWQFEMGDVLIDG-ETTGYCSTGCNAIADSGTSLLAG 302 (514)
Q Consensus 229 l~l~~~~-~~~~~G~L~fGg~D~s~~~g~l~~~pl~~----~~~w~v~l~~i~vgg-~~~~~~~~~~~aiiDTGTs~i~l 302 (514)
+||.+.. +....|+|+|||+|+++|.|+++|+|+.. .++|.|. ++|.|++ +.+. ....++|||||+++++
T Consensus 145 ~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~---~~~~aiiDSGTt~~~l 220 (340)
T 1wkr_A 145 VSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSIL---SSTAGIVDTGTTLTLI 220 (340)
T ss_dssp EECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEE---EEEEEEECTTBCSEEE
T ss_pred EEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEcc---CCCeEEEeCCcccccC
Confidence 9998642 12347999999999999999999999976 7899999 9999998 7663 2468999999999999
Q ss_pred CHHHHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCC
Q 010251 303 PTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGV 382 (514)
Q Consensus 303 p~~~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (514)
|++++++|.+++++..
T Consensus 221 P~~~~~~l~~~~~a~~---------------------------------------------------------------- 236 (340)
T 1wkr_A 221 ASDAFAKYKKATGAVA---------------------------------------------------------------- 236 (340)
T ss_dssp CHHHHHHHHHHHTCEE----------------------------------------------------------------
T ss_pred CHHHHHHHHHhhCCEE----------------------------------------------------------------
Confidence 9999999999887650
Q ss_pred CCcccchhhhHHHHHHHHHHhhchhhHHHHhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceEEe
Q 010251 383 HDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEV 462 (514)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~y~~~~ 462 (514)
....+.|.++|+....+|+|+|+|+|++++|+|++|+++.
T Consensus 237 ----------------------------------------~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~i~~~~yi~~~ 276 (340)
T 1wkr_A 237 ----------------------------------------DNNTGLLRLTTAQYANLQSLFFTIGGQTFELTANAQIWPR 276 (340)
T ss_dssp ----------------------------------------CTTTSSEEECHHHHHTCCCEEEEETTEEEEECTGGGBCCG
T ss_pred ----------------------------------------cCCCCeEEeeccccccCCcEEEEECCEEEEEcHHHhcccc
Confidence 1124678999986667999999999999999999999864
Q ss_pred cc-----CccceeEeeeEecccCCCCCCeeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 463 GE-----GVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 463 ~~-----~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
.. +....|.+.|..++.+...++.||||++|||++|+|||++++|||||+++
T Consensus 277 ~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 333 (340)
T 1wkr_A 277 NLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTS 333 (340)
T ss_dssp GGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECT
T ss_pred ccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecC
Confidence 32 12357998888765433344679999999999999999999999999975
No 27
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=7.8e-56 Score=471.36 Aligned_cols=325 Identities=26% Similarity=0.423 Sum_probs=263.9
Q ss_pred eceeccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCcccccCCcccCCCCCceeecCeEEEEEeccceEEEE
Q 010251 80 ALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGF 159 (514)
Q Consensus 80 ~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~~G~ 159 (514)
+|.+..+..|+++|+||||||+|+|+|||||+++||+|..| |..++.|++++|+||+..++.|.+.|++|++.|.
T Consensus 67 ~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c-----c~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 141 (455)
T 3lpj_A 67 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGE 141 (455)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred cccCCCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc-----cccCCcccCCCCCCcccCCccEEEEeCCeEEEEE
Confidence 45556678999999999999999999999999999999887 6678999999999999999999999999999999
Q ss_pred EEEEEEEECC-EEec-ceeEEEEEecccccccccccceEEeecccccccC--CCCchHHHHHHcCCCCCCEEEEEecCCC
Q 010251 160 FSQDNVKVGD-LVVK-NQDFIEATKEASITFLAAKFDGILGLGFQEISIG--KAIPVWYNMLDQGLVKEPVFSFWLNRDI 235 (514)
Q Consensus 160 ~~~D~v~igg-~~v~-~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~--~~~~~~~~L~~qg~i~~~~FSl~l~~~~ 235 (514)
+++|+|+|++ ..+. .+.|+++............++||||||++..+.. ...+++++|++|+.|+ ++||+||.+..
T Consensus 142 ~~~Dtv~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~L~~~~ 220 (455)
T 3lpj_A 142 LGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAG 220 (455)
T ss_dssp EEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCS
T ss_pred EEEEEEEECCCcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHccCCC-ceeEEEecccc
Confidence 9999999984 2222 2567877665442222367899999999988764 3788999999999997 99999997631
Q ss_pred C--------CCCCcEEEECCcCCCCcccceEEEecccCCceEEEEceEEECCeeecccC---CCceEEEcCCCCCcccCH
Q 010251 236 E--------GEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCS---TGCNAIADSGTSLLAGPT 304 (514)
Q Consensus 236 ~--------~~~~G~L~fGg~D~s~~~g~l~~~pl~~~~~w~v~l~~i~vgg~~~~~~~---~~~~aiiDTGTs~i~lp~ 304 (514)
. ....|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+.+.. ....+||||||+++++|+
T Consensus 221 ~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~ 300 (455)
T 3lpj_A 221 FPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPK 300 (455)
T ss_dssp SCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTSSSEEEEH
T ss_pred ccccccccccCCCceEEECCcCcccccCceEEEecCCCceeEEEEeEEEECCEEccccccccCCCeEEEECCCcceeCCH
Confidence 0 23489999999999999999999999999999999999999999876422 256899999999999999
Q ss_pred HHHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCC
Q 010251 305 TIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHD 384 (514)
Q Consensus 305 ~~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (514)
+++++|++++++....
T Consensus 301 ~~~~~i~~~i~~~~~~---------------------------------------------------------------- 316 (455)
T 3lpj_A 301 KVFEAAVKSIKAASST---------------------------------------------------------------- 316 (455)
T ss_dssp HHHHHHHHHHHHHTTT----------------------------------------------------------------
T ss_pred HHHHHHHHHhhhhccc----------------------------------------------------------------
Confidence 9999999999765100
Q ss_pred cccchhhhHHHHHHHHHHhhchhhHHHHhhhhccccCCCCC-CCCeeeeCCCCCC-----CCcEEEEECCE------EEE
Q 010251 385 SAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSP-NGESAVDCDNLSS-----MPNVSFTIGGK------VFD 452 (514)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~~~~~~C~~~~~-----~P~l~f~fgg~------~~~ 452 (514)
...+.. ...|.++|..... +|+|+|+|+|. +++
T Consensus 317 -----------------------------------~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~ 361 (455)
T 3lpj_A 317 -----------------------------------EKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRIT 361 (455)
T ss_dssp -----------------------------------SCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEE
T ss_pred -----------------------------------cccCcccccCcceecccccCCchhcCCcEEEEEcCCCcCceEEEE
Confidence 000000 0223578876654 89999999765 599
Q ss_pred eCcCcceEEeccCc--cceeEeeeEecccCCCCCCeeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 453 LAPNEYVLEVGEGV--AAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 453 l~~~~y~~~~~~~~--~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
|+|++|+++..+.. ...|++ |... +..+.||||++|||++|+|||++++|||||+++
T Consensus 362 l~~~~yi~~~~~~~~~~~~C~~-f~~~----~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 420 (455)
T 3lpj_A 362 ILPQQYLRPVEDVATSQDDCYK-FAIS----QSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA 420 (455)
T ss_dssp ECHHHHEEEECCTTCCSCEEEE-ECEE----EESSCEEECHHHHTTEEEEEETTTTEEEEEEET
T ss_pred ECHHHheEeccCCCCCCceEEE-Eecc----CCCCcEEEChHHhCCeEEEEECCCCEEEEEecc
Confidence 99999999865432 257996 3211 123579999999999999999999999999974
No 28
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.2e-54 Score=452.35 Aligned_cols=324 Identities=25% Similarity=0.468 Sum_probs=259.6
Q ss_pred eceeccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCcccccCCcccCCCCCceeecCeEEEEEeccceEEEE
Q 010251 80 ALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGF 159 (514)
Q Consensus 80 ~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~~G~ 159 (514)
+|++..+.+|+++|+||||||+++|+|||||+++||+|..|. .| ++.|++++|+||+..++.|.+.|++|++.|.
T Consensus 6 ~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~---~~--~~~f~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 80 (383)
T 2ewy_A 6 NLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHS---YI--DTYFDTERSSTYRSKGFDVTVKYTQGSWTGF 80 (383)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBT---TB--SCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred eccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCC---cc--ccCcccccCccceeCCceEEEEECCcEEEEE
Confidence 677777889999999999999999999999999999998884 34 5889999999999999999999999999999
Q ss_pred EEEEEEEECCEE-ec-ceeEEEEEecccccccccccceEEeeccccccc--CCCCchHHHHHHcCCCCCCEEEEEecCC-
Q 010251 160 FSQDNVKVGDLV-VK-NQDFIEATKEASITFLAAKFDGILGLGFQEISI--GKAIPVWYNMLDQGLVKEPVFSFWLNRD- 234 (514)
Q Consensus 160 ~~~D~v~igg~~-v~-~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~--~~~~~~~~~L~~qg~i~~~~FSl~l~~~- 234 (514)
+++|+|+|++.. .. .+.|++.....+.......++||||||++..+. ....+++++|++|+.| +++||+||++.
T Consensus 81 ~~~Dtv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i-~~~FS~~l~~~~ 159 (383)
T 2ewy_A 81 VGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANI-PNVFSMQMCGAG 159 (383)
T ss_dssp EEEEEEEETTTEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTC-CSCEEEEECCC-
T ss_pred EEEEEEEECCCccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHccCC-CcceEEEeeccc
Confidence 999999998632 22 356777654433211235679999999998775 4578899999999999 79999999752
Q ss_pred ----CCCCCCcEEEECCcCCCCcccceEEEecccCCceEEEEceEEECCeeecccCC---CceEEEcCCCCCcccCHHHH
Q 010251 235 ----IEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCST---GCNAIADSGTSLLAGPTTII 307 (514)
Q Consensus 235 ----~~~~~~G~L~fGg~D~s~~~g~l~~~pl~~~~~w~v~l~~i~vgg~~~~~~~~---~~~aiiDTGTs~i~lp~~~~ 307 (514)
......|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+.+... ...+||||||+++++|++++
T Consensus 160 ~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~ 239 (383)
T 2ewy_A 160 LPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKVF 239 (383)
T ss_dssp --------CCEEEEETSCCGGGCCSCEEEEECSSBTTBBCCEEEEEETTEECCCCTTTTTSSCEEECTTCSSEEEEHHHH
T ss_pred cccccCCCCCeEEEeCccchhhccCccEEEecCCCceEEEEEEEEEECCEEccccccccCCccEEEEcCCccccCCHHHH
Confidence 12234899999999999999999999999889999999999999988754322 46899999999999999999
Q ss_pred HHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCccc
Q 010251 308 TQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAM 387 (514)
Q Consensus 308 ~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (514)
++|++++++.... +
T Consensus 240 ~~l~~~i~~~~~~------------------------~------------------------------------------ 253 (383)
T 2ewy_A 240 DAVVEAVARASLI------------------------P------------------------------------------ 253 (383)
T ss_dssp HHHHHHHHHTTCS------------------------S------------------------------------------
T ss_pred HHHHHHHhhhccc------------------------c------------------------------------------
Confidence 9999999765100 0
Q ss_pred chhhhHHHHHHHHHHhhchhhHHHHhhhhccccCCCCC-CCCeeeeCCCCC-----CCCcEEEEECCE------EEEeCc
Q 010251 388 CSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSP-NGESAVDCDNLS-----SMPNVSFTIGGK------VFDLAP 455 (514)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~~~~~~C~~~~-----~~P~l~f~fgg~------~~~l~~ 455 (514)
..+.. ...|.++|.... .+|+|+|+|+|. +++|+|
T Consensus 254 ---------------------------------~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~ 300 (383)
T 2ewy_A 254 ---------------------------------EFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRITILP 300 (383)
T ss_dssp ---------------------------------CCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSSTTEEEEEEECH
T ss_pred ---------------------------------cCccccccccccccccCCcccHhhCCcEEEEECCCCCCceEEEEECh
Confidence 00000 012356776542 589999999763 799999
Q ss_pred CcceEEecc-CccceeEe-eeEecccCCCCCCeeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 456 NEYVLEVGE-GVAAQCIS-GFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 456 ~~y~~~~~~-~~~~~C~~-~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
++|+.+..+ +....|+. ++.. .++.||||++|||++|+|||++++|||||+++
T Consensus 301 ~~yi~~~~~~~~~~~C~~~~i~~------~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 355 (383)
T 2ewy_A 301 QLYIQPMMGAGLNYECYRFGISP------STNALVIGATVMEGFYVIFDRAQKRVGFAASP 355 (383)
T ss_dssp HHHEEEECCCTTCSEEEEESEEE------ESSCEEECHHHHTTEEEEEETTTTEEEEEECT
T ss_pred HHheeecccCCCCceeEEEEecC------CCCcEEEChHHhCCeeEEEECCCCeEEEEecc
Confidence 999997642 22357985 4442 12479999999999999999999999999974
No 29
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=2.2e-54 Score=453.18 Aligned_cols=323 Identities=26% Similarity=0.423 Sum_probs=259.6
Q ss_pred ceeccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCcccccCCcccCCCCCceeecCeEEEEEeccceEEEEE
Q 010251 81 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFF 160 (514)
Q Consensus 81 l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~~G~~ 160 (514)
|.+..+.+|+++|+||||||+++|+|||||+++||+|..| |..++.|+|++|+||+..++.|.+.|++|++.|.+
T Consensus 22 l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c-----~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~ 96 (402)
T 3vf3_A 22 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGEL 96 (402)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEEE
T ss_pred ccCCCCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC-----CcccCCcCcccCcccccCCCEEEEEECcEEEEEEE
Confidence 3444567899999999999999999999999999999887 66789999999999999999999999999999999
Q ss_pred EEEEEEEC-CEEecc-eeEEEEEecccccccccccceEEeecccccccCC--CCchHHHHHHcCCCCCCEEEEEecCCC-
Q 010251 161 SQDNVKVG-DLVVKN-QDFIEATKEASITFLAAKFDGILGLGFQEISIGK--AIPVWYNMLDQGLVKEPVFSFWLNRDI- 235 (514)
Q Consensus 161 ~~D~v~ig-g~~v~~-~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~--~~~~~~~L~~qg~i~~~~FSl~l~~~~- 235 (514)
++|+|+|+ +..+.. +.|+++....+.......++||||||++..+... .++++++|++|+.|+ ++||+||.+..
T Consensus 97 ~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~l~~~~~ 175 (402)
T 3vf3_A 97 GTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAGF 175 (402)
T ss_dssp EEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCC-
T ss_pred EEEEEEECCccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCc-cceEEEeecccc
Confidence 99999998 444443 3467666544322224578999999999887643 788999999999997 99999997531
Q ss_pred ----C---CCCCcEEEECCcCCCCcccceEEEecccCCceEEEEceEEECCeeecccC---CCceEEEcCCCCCcccCHH
Q 010251 236 ----E---GEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCS---TGCNAIADSGTSLLAGPTT 305 (514)
Q Consensus 236 ----~---~~~~G~L~fGg~D~s~~~g~l~~~pl~~~~~w~v~l~~i~vgg~~~~~~~---~~~~aiiDTGTs~i~lp~~ 305 (514)
. ....|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+.+.. ....++|||||+++++|.+
T Consensus 176 ~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~ 255 (402)
T 3vf3_A 176 PLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKK 255 (402)
T ss_dssp ------------EEEEESSCCGGGEEEEEEEEECSSBTTBEECEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHH
T ss_pred cccccccccCCCCEEEeCCcCcccccCceEEEeCCcCcEEEEEEeEEEECCEEecccccccCCCeEEEECCCCcccCCHH
Confidence 0 23489999999999999999999999999999999999999999876422 2568999999999999999
Q ss_pred HHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCc
Q 010251 306 IITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDS 385 (514)
Q Consensus 306 ~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (514)
++++|++++++...
T Consensus 256 ~~~~i~~~i~~~~~------------------------------------------------------------------ 269 (402)
T 3vf3_A 256 VFEAAVKSIKAASS------------------------------------------------------------------ 269 (402)
T ss_dssp HHHHHHHHHHHHTT------------------------------------------------------------------
T ss_pred HHHHHHHHHhhhcc------------------------------------------------------------------
Confidence 99999999976510
Q ss_pred ccchhhhHHHHHHHHHHhhchhhHHHHhhhhccccCCCCC-CCCeeeeCCCCC-----CCCcEEEEECCE------EEEe
Q 010251 386 AMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSP-NGESAVDCDNLS-----SMPNVSFTIGGK------VFDL 453 (514)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~~~~~~C~~~~-----~~P~l~f~fgg~------~~~l 453 (514)
....+.. ...|.++|.... .+|+|+|+|+|. +++|
T Consensus 270 ---------------------------------~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l 316 (402)
T 3vf3_A 270 ---------------------------------TEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITI 316 (402)
T ss_dssp ---------------------------------TSCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEEEEEEE
T ss_pred ---------------------------------ccccCccccccccccccccccchHhhCCceEEEEecCCCCceEEEEE
Confidence 0000000 012357887654 599999999765 5999
Q ss_pred CcCcceEEeccCc--cceeEe-eeEecccCCCCCCeeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 454 APNEYVLEVGEGV--AAQCIS-GFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 454 ~~~~y~~~~~~~~--~~~C~~-~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
+|++|+++..+.. ...|+. .+.. .++.||||++|||++|++||++++|||||+++
T Consensus 317 ~~~~yi~~~~~~~~~~~~C~~~~~~~------~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 374 (402)
T 3vf3_A 317 LPQQYLRPVEDVATSQDDCYKFAISQ------SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA 374 (402)
T ss_dssp CHHHHEEECCCGGGTTEEEEEECEEE------ESSCEEECHHHHTTEEEEEEGGGTEEEEEEET
T ss_pred CHHHheehhccCCCCCceEEEEeccC------CCCcEEEChHHhCCeEEEEECCCCEEEEEecc
Confidence 9999999865432 247995 3321 23579999999999999999999999999975
No 30
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=4.7e-54 Score=449.74 Aligned_cols=323 Identities=26% Similarity=0.419 Sum_probs=259.4
Q ss_pred eceeccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCcccccCCcccCCCCCceeecCeEEEEEeccceEEEE
Q 010251 80 ALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGF 159 (514)
Q Consensus 80 ~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~~G~ 159 (514)
+|.+..+.+|+++|+||||||+++|+|||||+++||+|..|. . .++.|++++|+||+..++.|.++|++|++.|.
T Consensus 14 ~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~---~--~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 88 (395)
T 2qp8_A 14 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP---F--LHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGE 88 (395)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT---T--CSCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred ecCCCCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCc---c--ccCCcCcccCCCceeCCceEEEEECCcEEEEE
Confidence 456666889999999999999999999999999999999884 2 36889999999999999999999999999999
Q ss_pred EEEEEEEEC-CEEec-ceeEEEEEeccccccc-ccccceEEeecccccccC--CCCchHHHHHHcCCCCCCEEEEEecCC
Q 010251 160 FSQDNVKVG-DLVVK-NQDFIEATKEASITFL-AAKFDGILGLGFQEISIG--KAIPVWYNMLDQGLVKEPVFSFWLNRD 234 (514)
Q Consensus 160 ~~~D~v~ig-g~~v~-~~~fg~~~~~~~~~~~-~~~~~GIlGLg~~~~s~~--~~~~~~~~L~~qg~i~~~~FSl~l~~~ 234 (514)
+++|+|+++ +..+. .+.|++.....+. |. ...++||||||++..+.. ...+++++|++|+.|+ ++||+||++.
T Consensus 89 ~~~Dtv~ig~g~~~~~~~~~~~~~~~~~~-f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~-~~FS~~L~~~ 166 (395)
T 2qp8_A 89 LGTDLVSIPHGPNVTVRANIAAITESDKF-FINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGA 166 (395)
T ss_dssp EEEEEEECTTSCSCEEEEEEEEEEEEESC-SCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCC
T ss_pred EEeEEEEECCCCCceEEEEEEEEEccCcc-cccccCccceEEcCchhhccCCCCCCCHHHHHHHccCCc-ceEEEEeccc
Confidence 999999998 55443 2567766544332 32 356799999999987753 5788999999999997 8999999863
Q ss_pred CC--------CCCCcEEEECCcCCCCcccceEEEecccCCceEEEEceEEECCeeecccC---CCceEEEcCCCCCcccC
Q 010251 235 IE--------GEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCS---TGCNAIADSGTSLLAGP 303 (514)
Q Consensus 235 ~~--------~~~~G~L~fGg~D~s~~~g~l~~~pl~~~~~w~v~l~~i~vgg~~~~~~~---~~~~aiiDTGTs~i~lp 303 (514)
.- ....|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|.|+++.+.+.. ....+||||||+++++|
T Consensus 167 ~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP 246 (395)
T 2qp8_A 167 GFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLP 246 (395)
T ss_dssp SSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEE
T ss_pred cccccccccccCCCcEEEECCcCcccccCceEEeccCCCceEEEEEEEEEECCEEcccCccccCCceEEEEcCCCcEecC
Confidence 10 12479999999999999999999999988999999999999998875422 24689999999999999
Q ss_pred HHHHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCC
Q 010251 304 TTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVH 383 (514)
Q Consensus 304 ~~~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (514)
++++++|++++++.... +
T Consensus 247 ~~~~~~l~~~i~~~~~~------------------------~-------------------------------------- 264 (395)
T 2qp8_A 247 KKVFEAAVKSIKAASST------------------------E-------------------------------------- 264 (395)
T ss_dssp HHHHHHHHHHHHHHTTT------------------------S--------------------------------------
T ss_pred HHHHHHHHHHHhhhccc------------------------c--------------------------------------
Confidence 99999999998765100 0
Q ss_pred CcccchhhhHHHHHHHHHHhhchhhHHHHhhhhccccCCCCC-CCCeeeeCCCCC-----CCCcEEEEECCE------EE
Q 010251 384 DSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSP-NGESAVDCDNLS-----SMPNVSFTIGGK------VF 451 (514)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~~~~~~C~~~~-----~~P~l~f~fgg~------~~ 451 (514)
..+.. ...+.++|.... .+|+|+|+|+|. ++
T Consensus 265 -------------------------------------~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~ 307 (395)
T 2qp8_A 265 -------------------------------------KFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRI 307 (395)
T ss_dssp -------------------------------------CCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEE
T ss_pred -------------------------------------cCCccccccccccccccccchHhhCCcEEEEEccCCCCceEEE
Confidence 00000 011245776543 489999999764 79
Q ss_pred EeCcCcceEEecc--CccceeE-eeeEecccCCCCCCeeEecHhhhcceEEEEECCCCeEEEEecC
Q 010251 452 DLAPNEYVLEVGE--GVAAQCI-SGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 452 ~l~~~~y~~~~~~--~~~~~C~-~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
+|+|++|+++..+ +....|+ .++... ++.||||++|||++|+|||++++|||||+++
T Consensus 308 ~l~p~~yi~~~~~~~~~~~~C~~~~i~~~------~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 367 (395)
T 2qp8_A 308 TILPQQYLRPVEDVATSQDDCYKFAISQS------STGTVMGAVIMEGFYVVFDRARKRIGFAVSA 367 (395)
T ss_dssp EECHHHHEEEECCTTCCSCEEEEECEEEE------SSCEEECHHHHTTEEEEEETTTTEEEEEEET
T ss_pred EECHHHhEeecccCCCCCceEEEEEecCC------CCcEEEChHHhCCeeEEEECCCCEEEEEecc
Confidence 9999999998653 2335897 455531 2579999999999999999999999999974
No 31
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=2.8e-53 Score=444.96 Aligned_cols=324 Identities=16% Similarity=0.254 Sum_probs=255.1
Q ss_pred ceEece-eccCceEEEEEEEcCCCceEEEEecCCCCceeeeCC-----------CCCCCcccccCCcc------cCCCCC
Q 010251 77 DIVALN-NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSA-----------KCYFSVSCYFHSKY------KSSHSS 138 (514)
Q Consensus 77 ~~~~l~-n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~-----------~C~~~~~C~~~~~f------~~~~Ss 138 (514)
..+||+ |+.+.+|+++|.||||||+|.|+|||||+++||+|. .|. +..|..+..| ++..|+
T Consensus 10 ~~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~~~Sst~~~~~C~-s~~C~~~~~~~c~~c~~~~~s~ 88 (403)
T 3aup_A 10 VVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCH-STQCSRANTHQCLSCPAASRPG 88 (403)
T ss_dssp EEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSCCCCSSCBCCCTT-BHHHHHTTCCCEEECSSSCBTT
T ss_pred EEEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCCCCCCCCCccCCC-CccccCccccCccccCCCCCCC
Confidence 468998 888999999999999999999999999999999999 664 4568777777 555443
Q ss_pred ceeecCeEEEEEec-cc-eEEEEEEEEEEEECC-----------EEecceeEEEEEecccccccccccceEEeecccccc
Q 010251 139 TYKRNGTSAAIQYG-TG-AISGFFSQDNVKVGD-----------LVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 205 (514)
Q Consensus 139 T~~~~~~~~~~~Yg-~g-s~~G~~~~D~v~igg-----------~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s 205 (514)
+....|.|.+.|+ +| ++.|.+++|+|+|++ ..++++.|||+.......+....++||||||+...+
T Consensus 89 -~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s 167 (403)
T 3aup_A 89 -CHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPIS 167 (403)
T ss_dssp -BCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEECSSSTTS
T ss_pred -CCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEECCCCCcC
Confidence 5556889999997 45 489999999999987 889999999998754322334678999999998765
Q ss_pred cCCCCchHHHHHHcCCCCCCEEEEEecCCCCCCCCcEEEECCcCCCCc--c-c-----ceEEEecccC--CceEEEEceE
Q 010251 206 IGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHY--K-G-----EHTYVPVTKK--GYWQFEMGDV 275 (514)
Q Consensus 206 ~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGg~D~s~~--~-g-----~l~~~pl~~~--~~w~v~l~~i 275 (514)
+..+|. ++.+.+++||+||.+.. ...|+|+||| |+++| . | ++.|+|+... ++|.|.+++|
T Consensus 168 ------~~~ql~-~~~~~~~~FS~~L~~~~--~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~i 237 (403)
T 3aup_A 168 ------LPNQLA-SHFGLQRQFTTCLSRYP--TSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSI 237 (403)
T ss_dssp ------HHHHHH-HHHTCCSEEEEECCSCT--TSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEEE
T ss_pred ------HHHHHH-hhcCCCCeEEEEcCCCC--CCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEEEEE
Confidence 555664 55577899999998752 2489999999 99888 5 5 9999999765 8999999999
Q ss_pred EECCeee-cccCC--------CceEEEcCCCCCcccCHHHHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcc
Q 010251 276 LIDGETT-GYCST--------GCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQ 346 (514)
Q Consensus 276 ~vgg~~~-~~~~~--------~~~aiiDTGTs~i~lp~~~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~ 346 (514)
.|+++.+ .+... ...+||||||++++||++++++|++++.+.. + .
T Consensus 238 ~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~-------------~---------~---- 291 (403)
T 3aup_A 238 RINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQL-------------P---------K---- 291 (403)
T ss_dssp EETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTS-------------C---------G----
T ss_pred EECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHh-------------c---------c----
Confidence 9999887 43221 2359999999999999999999999985430 0 0
Q ss_pred cccccCcccccCCCCcccccceeeeccCCCCCCCCCCCcccchhhhHHHHHHHHHHhhchhhHHHHhhhhccccCCCCCC
Q 010251 347 KICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPN 426 (514)
Q Consensus 347 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 426 (514)
++.+ + +...
T Consensus 292 --------------------~~~~-~--------------------------------------------------~~~~ 300 (403)
T 3aup_A 292 --------------------QAQV-K--------------------------------------------------SVAP 300 (403)
T ss_dssp --------------------GGEE-C--------------------------------------------------CCTT
T ss_pred --------------------cccc-C--------------------------------------------------CCCC
Confidence 0000 0 0011
Q ss_pred CCeeeeCCCCCCCCcEEEEECC---EEEEeCcCcceEEeccCccceeEeeeEecccCCCCCCeeEecHhhhcceEEEEEC
Q 010251 427 GESAVDCDNLSSMPNVSFTIGG---KVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDY 503 (514)
Q Consensus 427 ~~~~~~C~~~~~~P~l~f~fgg---~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~ 503 (514)
..|.++|+.+..+|+|+|+|+| ++++|++++|+++..+ ...|+ +|...+. ..++.||||+.|||++|+|||+
T Consensus 301 ~~~c~~c~~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~--~~~C~-~~~~~~~--~~~~~~ILG~~fl~~~yvvfD~ 375 (403)
T 3aup_A 301 FGLCFNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQP--GVTCL-GVMNGGM--QPRAEITLGARQLEENLVVFDL 375 (403)
T ss_dssp CSCEECGGGCCCCCCEEEEESSTTCCEEEECHHHHEEEC-----CEEE-CEEECCS--CCSSSEEECHHHHTTSCEEEET
T ss_pred CCceEECCCcCcCCcEEEEEcCCCceEEEEcccceEEEcCC--CeEEE-EEEcCCC--CCCCcEEEChHHhcCeEEEEEC
Confidence 2356789877789999999976 4999999999997543 36899 7876542 1245899999999999999999
Q ss_pred CCCeEEE-EecC
Q 010251 504 GNLSIGF-AEAA 514 (514)
Q Consensus 504 ~~~rIGf-a~a~ 514 (514)
+++|||| |+++
T Consensus 376 ~~~rIGf~A~~~ 387 (403)
T 3aup_A 376 ARSRVGFSTSSL 387 (403)
T ss_dssp TTTEEEEESSCG
T ss_pred CCCEEEEecccc
Confidence 9999999 7753
No 32
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=1e-52 Score=441.20 Aligned_cols=327 Identities=16% Similarity=0.220 Sum_probs=254.1
Q ss_pred cceEecee-ccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCC-----------CCCCcccccCCcccCCC-----CC
Q 010251 76 TDIVALNN-FMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAK-----------CYFSVSCYFHSKYKSSH-----SS 138 (514)
Q Consensus 76 ~~~~~l~n-~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~-----------C~~~~~C~~~~~f~~~~-----Ss 138 (514)
...+|++. ..+.+|+++|+||||||+|.|++||||+++||+|.. |. +..|..++.|++.. ++
T Consensus 8 ~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c~~Sst~~~v~C~-s~~C~~~~~~~~~~c~s~~~~ 86 (413)
T 3vla_A 8 ALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCR-TSQCSLSGSIACGDCFNGPRP 86 (413)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSSCCCTTCEECBTT-SHHHHHTTCCEEECCSSCCBT
T ss_pred cEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCCCCCCCcCccCCC-cccccccccCCCcccccCCCC
Confidence 34567764 567899999999999999999999999999999965 43 45677777787642 34
Q ss_pred ceeecCeEEEEEec-cce-EEEEEEEEEEEEC---------CEEecceeEEEEEecccccccccccceEEeecccccccC
Q 010251 139 TYKRNGTSAAIQYG-TGA-ISGFFSQDNVKVG---------DLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIG 207 (514)
Q Consensus 139 T~~~~~~~~~~~Yg-~gs-~~G~~~~D~v~ig---------g~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~ 207 (514)
++....|.|.+.|+ +|+ +.|++++|+|+|+ ++.++++.|||+....... ....++||||||+..++
T Consensus 87 ~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g-~~~~~dGIlGLg~~~lS-- 163 (413)
T 3vla_A 87 GCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQN-LASGVVGMAGLGRTRIA-- 163 (413)
T ss_dssp TBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTT-SCTTCCEEEECSSSSSS--
T ss_pred CCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccC-cccccccccccCCCCcc--
Confidence 56667799999995 654 7999999999996 3688899999998753221 23568999999998876
Q ss_pred CCCchHHHHHHcCCCCCCEEEEEecCCCCCCCCcEEEECCcCCCC-----cccc-eEEEecccC--------------Cc
Q 010251 208 KAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDH-----YKGE-HTYVPVTKK--------------GY 267 (514)
Q Consensus 208 ~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGg~D~s~-----~~g~-l~~~pl~~~--------------~~ 267 (514)
+..+|.+++.+ +++||+||.+. ...+|+|+|||+|..+ |.|+ ++|+|+..+ .+
T Consensus 164 ----l~sql~~~~~i-~~~FS~cL~~~--~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~ 236 (413)
T 3vla_A 164 ----LPSQFASAFSF-KRKFAMCLSGS--TSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVE 236 (413)
T ss_dssp ----HHHHHHHHHTC-CSEEEEECCSC--SSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCS
T ss_pred ----hHHHHhhhcCC-CceEEEeCCCC--CCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCce
Confidence 77889999988 89999999884 2348999999998753 7888 999999754 79
Q ss_pred eEEEEceEEECCeeecccC--------CCceEEEcCCCCCcccCHHHHHHHHHHhccCcccccchhhHHhhhhhHHHHHH
Q 010251 268 WQFEMGDVLIDGETTGYCS--------TGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEML 339 (514)
Q Consensus 268 w~v~l~~i~vgg~~~~~~~--------~~~~aiiDTGTs~i~lp~~~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~ 339 (514)
|.|+|++|.||++.+.++. +++.+||||||++++||+++|++|.++|.+.
T Consensus 237 y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~---------------------- 294 (413)
T 3vla_A 237 YFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKE---------------------- 294 (413)
T ss_dssp CEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHH----------------------
T ss_pred EEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHH----------------------
Confidence 9999999999999886432 3578999999999999999999999998764
Q ss_pred Hh--ccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCcccchhhhHHHHHHHHHHhhchhhHHHHhhhhc
Q 010251 340 IA--ETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQ 417 (514)
Q Consensus 340 ~~--~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (514)
+. ..+.......+..
T Consensus 295 ~~~~~~~~~~~~~~~~~--------------------------------------------------------------- 311 (413)
T 3vla_A 295 SAARNITRVASVAPFGA--------------------------------------------------------------- 311 (413)
T ss_dssp HHHTTCCEECCCTTCSC---------------------------------------------------------------
T ss_pred hcccCCCcCCCCCCCcc---------------------------------------------------------------
Confidence 00 0000000011122
Q ss_pred cccCCCCCCCCeeeeCCC----CCCCCcEEEEECC--EEEEeCcCcceEEeccCccceeEeeeEecccCCCCCCeeEecH
Q 010251 418 LCDRLPSPNGESAVDCDN----LSSMPNVSFTIGG--KVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGD 491 (514)
Q Consensus 418 ~c~~~~~~~~~~~~~C~~----~~~~P~l~f~fgg--~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~ 491 (514)
|+.. +|.. ...+|+|+|+|+| +.|+|++++|+++..++ ..|+ +|...+. ..++.||||+
T Consensus 312 -C~~~---------~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~--~~Cl-~~~~~~~--~~~~~~IlGd 376 (413)
T 3vla_A 312 -CFST---------DNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDN--VVCL-GVVDGGS--NLRTSIVIGG 376 (413)
T ss_dssp -EEEC---------TTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEETT--EEEE-CEEEEES--SCSSSEEECH
T ss_pred -eecc---------CCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCCC--cEEE-EEEecCC--CcccceeEeh
Confidence 2222 1111 1269999999977 89999999999986543 5798 6665542 2346899999
Q ss_pred hhhcceEEEEECCCCeEEEEec
Q 010251 492 VFMGRYHTVFDYGNLSIGFAEA 513 (514)
Q Consensus 492 ~fl~~~y~vfD~~~~rIGfa~a 513 (514)
.|||++|++||++++|||||++
T Consensus 377 ~fl~~~~vvfD~~~~riGfa~~ 398 (413)
T 3vla_A 377 HQLEDNLVQFDLATSRVGFSGT 398 (413)
T ss_dssp HHHTTEEEEEETTTTEEEEEEE
T ss_pred hhhcCeEEEEECCCCEEEEEEe
Confidence 9999999999999999999987
No 33
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=1.9e-49 Score=412.91 Aligned_cols=324 Identities=14% Similarity=0.205 Sum_probs=238.6
Q ss_pred eEece-eccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCC-------CCcccccCCcccCCCCCcee-------e
Q 010251 78 IVALN-NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCY-------FSVSCYFHSKYKSSHSSTYK-------R 142 (514)
Q Consensus 78 ~~~l~-n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~-------~~~~C~~~~~f~~~~SsT~~-------~ 142 (514)
.+|+. ++.+.+|+++|+|||| |+|||||+++||+|..|. .+..|..++.|++..+ ++. .
T Consensus 4 ~~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~~~~~~~C~s~~C~~~~~~~~~sc-~~~~~~~~~~~ 77 (381)
T 1t6e_X 4 LAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPGC-PAPSCGSDKHD 77 (381)
T ss_dssp EEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTCCCCCCBTTSHHHHHHHSSCCTTC-CCCCC------
T ss_pred EEeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCCCCCccCCCCchhccccCCCCCCC-CCccCCcCcCC
Confidence 46776 7789999999999998 999999999999995442 1456776677877533 332 2
Q ss_pred cCe-EEEEEeccceE-EEEEEEEEEEECC----EEecce----eEEEEEecccccccccccceEEeecccccccCCCCch
Q 010251 143 NGT-SAAIQYGTGAI-SGFFSQDNVKVGD----LVVKNQ----DFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPV 212 (514)
Q Consensus 143 ~~~-~~~~~Yg~gs~-~G~~~~D~v~igg----~~v~~~----~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~ 212 (514)
..| .|.++|++|+. .|.+++|+|++++ ..++++ .|||+.......+ ...++||||||+..++ +
T Consensus 78 ~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~-~~~~dGIlGLg~~~~s------~ 150 (381)
T 1t6e_X 78 KPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL-PRGSTGVAGLANSGLA------L 150 (381)
T ss_dssp CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS-CTTEEEEEECSSSTTS------H
T ss_pred CccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC-CCCCceEEEeCCCcch------h
Confidence 234 58999999984 8999999999984 466665 5699876532222 3578999999998765 6
Q ss_pred HHHHHHcCCCCCCEEEEEecCCCCCCCCcEEEECCcCCC--CcccceEEEecccC---CceEEEEceEEECCeeecccCC
Q 010251 213 WYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPD--HYKGEHTYVPVTKK---GYWQFEMGDVLIDGETTGYCST 287 (514)
Q Consensus 213 ~~~L~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGg~D~s--~~~g~l~~~pl~~~---~~w~v~l~~i~vgg~~~~~~~~ 287 (514)
..+|.+||+ .+++||+||.+. .+|+|+|||+|.. +|.|+++|+|+... .+|.|.+++|.||++.+.++..
T Consensus 151 ~~ql~~~~~-~~~~FS~~L~~~----~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~ 225 (381)
T 1t6e_X 151 PAQVASAQK-VANRFLLCLPTG----GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEG 225 (381)
T ss_dssp HHHHHHHHT-CCSEEEEECCSS----SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTT
T ss_pred HHHHhhhcc-cCceEEEEeCCC----CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecCCHH
Confidence 678999885 479999999875 3899999998765 58999999999753 4677999999999988764433
Q ss_pred ---CceEEEcCCCCCcccCHHHHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCccc
Q 010251 288 ---GCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFS 364 (514)
Q Consensus 288 ---~~~aiiDTGTs~i~lp~~~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 364 (514)
++.+||||||+++++|+++|++|.+++.+.. ...+ .+ -+....
T Consensus 226 ~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~---------~~~~----~~--g~~~~~------------------- 271 (381)
T 1t6e_X 226 ALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKAL---------AAQH----AN--GAPVAR------------------- 271 (381)
T ss_dssp CSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHH---------HHC-------------CC-------------------
T ss_pred HccCCCEEEECCCccEEeCHHHHHHHHHHHHHhh---------cccc----cc--cccccc-------------------
Confidence 4579999999999999999999999986540 0000 00 000000
Q ss_pred ccceeeeccCCCCCCCCCCCcccchhhhHHHHHHHHHHhhchhhHHHHhhhhccccCCCCCCCCeeeeCCCC--------
Q 010251 365 MGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNL-------- 436 (514)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~-------- 436 (514)
+. ....+..+|...
T Consensus 272 -----~~-----------------------------------------------------~~~~~~~~C~~~~~~~~~~~ 293 (381)
T 1t6e_X 272 -----AV-----------------------------------------------------EAVAPFGVCYDTKTLGNNLG 293 (381)
T ss_dssp -----EE-----------------------------------------------------CCCTTCSCEEEGGGCCEETT
T ss_pred -----cC-----------------------------------------------------CCCCCCCccCCCCCCccccc
Confidence 00 000011233221
Q ss_pred -CCCCcEEEEEC-CEEEEeCcCcceEEeccCccceeEeeeEecccC---CCCCCeeEecHhhhcceEEEEECCCCeEEEE
Q 010251 437 -SSMPNVSFTIG-GKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVA---PPRGPLWILGDVFMGRYHTVFDYGNLSIGFA 511 (514)
Q Consensus 437 -~~~P~l~f~fg-g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~---~~~~~~~iLG~~fl~~~y~vfD~~~~rIGfa 511 (514)
..+|+|+|+|+ |++++|++++|+++..+ ...|+ +|...+.+ .+.++.||||+.|||++|+|||++++|||||
T Consensus 294 ~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~Cl-~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA 370 (381)
T 1t6e_X 294 GYAVPNVQLGLDGGSDWTMTGKNSMVDVKQ--GTACV-AFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFS 370 (381)
T ss_dssp EECCCCEEEEETTSCEEEECHHHHEEEEET--TEEEE-SEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEE
T ss_pred CCcCCeEEEEECCCcEEEeCCCeEEEEcCC--CeEEE-EEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEe
Confidence 26899999996 59999999999998643 35798 57755421 1123589999999999999999999999999
Q ss_pred ecC
Q 010251 512 EAA 514 (514)
Q Consensus 512 ~a~ 514 (514)
+++
T Consensus 371 ~~~ 373 (381)
T 1t6e_X 371 RLP 373 (381)
T ss_dssp ECC
T ss_pred ccc
Confidence 975
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=2.3e-48 Score=379.23 Aligned_cols=237 Identities=69% Similarity=1.177 Sum_probs=217.7
Q ss_pred ceEeceeccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCcccccCCcccCCCCCceeecCeEEEEEeccceE
Q 010251 77 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAI 156 (514)
Q Consensus 77 ~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~ 156 (514)
..+||.|+.+.+|+++|+||||||+++|+|||||+++||+|..|..+..|..++.|+|++|+||+..++.+.+.|++|++
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~ 82 (239)
T 1b5f_A 3 AVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKENGTFGAIIYGTGSI 82 (239)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEE
T ss_pred ceeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCCCCCCCccCCCeeeCCcEEEEEECCCcE
Confidence 46899999999999999999999999999999999999999999545689999999999999999999999999999999
Q ss_pred EEEEEEEEEEECCEEecceeEEEEEecccccccccccceEEeecccccccCCCCchHHHHHHcCCCCCCEEEEEecCCCC
Q 010251 157 SGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIE 236 (514)
Q Consensus 157 ~G~~~~D~v~igg~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~ 236 (514)
.|.+++|+|++++..++++.||++....+..|....++||||||++..+ .|++++|++||.|.+++||+||.+..+
T Consensus 83 ~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s----~p~~~~l~~qg~i~~~~FS~~l~~~~~ 158 (239)
T 1b5f_A 83 TGFFSQDSVTIGDLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTIS----VPVWYNMLNQGLVKERRFSFWLNRNVD 158 (239)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSS----CCHHHHHHHTTCCSSSEEEEEECCSCS
T ss_pred EEEEEEEEEEECCcEEccEEEEEEEeccCccccccCcceEEecCccccc----cHHHHHHHHCCCCCCCEEEEEEeCCCC
Confidence 9999999999999999999999998876555666778999999998766 678899999999999999999988643
Q ss_pred CCCCcEEEECCcCCCCcccceEEEecccCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHHHHHHHHHHhcc
Q 010251 237 GEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGA 316 (514)
Q Consensus 237 ~~~~G~L~fGg~D~s~~~g~l~~~pl~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~~~~~l~~~i~~ 316 (514)
....|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+.++..+..++|||||+++++|++++++|.+++++
T Consensus 159 ~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 159 EEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp SSCCEEEEETSCCGGGEEEEEEEEEEEEETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred CCCCeEEEECCcChhhccCceEEEEcccCCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 34589999999999999999999999988999999999999999887666788999999999999999999999999986
Q ss_pred C
Q 010251 317 S 317 (514)
Q Consensus 317 ~ 317 (514)
.
T Consensus 239 ~ 239 (239)
T 1b5f_A 239 N 239 (239)
T ss_dssp C
T ss_pred C
Confidence 3
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=9.6e-45 Score=353.98 Aligned_cols=241 Identities=46% Similarity=0.907 Sum_probs=211.2
Q ss_pred CCEEecceeEEEEEecccccccccccceEEeecccccccCCCCchHHHHHHcCCCCCCEEEEEecCCCCCCCCcEEEECC
Q 010251 168 GDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGG 247 (514)
Q Consensus 168 gg~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGg 247 (514)
||++++++.|||+....+..|....++||||||++..+.....|++++|++||.|.+++||+||.+.......|+|+|||
T Consensus 1 gg~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg 80 (241)
T 1lya_B 1 GGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGG 80 (241)
T ss_dssp CCEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETS
T ss_pred CCeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECC
Confidence 57889999999999876655666788999999999888777889999999999999999999998864333489999999
Q ss_pred cCCCCcccceEEEecccCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHHHHHHHHHHhccCcccccchhhH
Q 010251 248 VDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTL 327 (514)
Q Consensus 248 ~D~s~~~g~l~~~pl~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~~~~~l~~~i~~~~~~~~~c~~~ 327 (514)
+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+. +..++.+++||||+++++|++++++|.+++++..
T Consensus 81 ~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~--------- 150 (241)
T 1lya_B 81 TDSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTL-CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVP--------- 150 (241)
T ss_dssp CCGGGEEEEEEEEECSSBTTBEEEEEEEEETTSCEE-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE---------
T ss_pred cCHHHcCCceEEEECccccEEEEEEeEEEECCeeEe-ccCCCEEEEECCCccccCCHHHHHHHHHHhCCee---------
Confidence 999999999999999999999999999999998753 5578899999999999999999999999987650
Q ss_pred HhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCcccchhhhHHHHHHHHHHhhchh
Q 010251 328 VDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNET 407 (514)
Q Consensus 328 ~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (514)
T Consensus 151 -------------------------------------------------------------------------------- 150 (241)
T 1lya_B 151 -------------------------------------------------------------------------------- 150 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceEEeccCccceeEeeeEecccCCCCCCee
Q 010251 408 ADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLW 487 (514)
Q Consensus 408 ~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ 487 (514)
...+.|.++|+....+|+|+|+|+|++++|+|++|+++........|+++|+..+.+++.++.|
T Consensus 151 ----------------~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ 214 (241)
T 1lya_B 151 ----------------LIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLW 214 (241)
T ss_dssp ----------------EETTEEEEEGGGGGGSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCE
T ss_pred ----------------ccCCcEEEECCCCccCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeE
Confidence 0145688999987789999999999999999999999876444468999998876554456789
Q ss_pred EecHhhhcceEEEEECCCCeEEEEecC
Q 010251 488 ILGDVFMGRYHTVFDYGNLSIGFAEAA 514 (514)
Q Consensus 488 iLG~~fl~~~y~vfD~~~~rIGfa~a~ 514 (514)
|||++|||++|+|||++++|||||+++
T Consensus 215 ilG~~fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 215 ILGDVFIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp EECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EechHHhcceEEEEECCCCEEEEEEcC
Confidence 999999999999999999999999986
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.89 E-value=1.8e-23 Score=174.05 Aligned_cols=93 Identities=58% Similarity=1.028 Sum_probs=86.9
Q ss_pred ceEeceeccCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCC-CcccccCCcccCCCCCceeecCeEEEEEeccce
Q 010251 77 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYF-SVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA 155 (514)
Q Consensus 77 ~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~-~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs 155 (514)
..+||.|+.+.+|+++|.||||||+|.|+|||||+++||++..|.. ...|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~~~y~p~~SsT~~~~~~~~~i~Yg~Gs 82 (97)
T 1lya_A 3 IPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGS 82 (97)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred ceEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCCCCCCchhCCCceeCCCcEEEEECCcE
Confidence 3589999999999999999999999999999999999999999952 248998999999999999999999999999999
Q ss_pred EEEEEEEEEEEECC
Q 010251 156 ISGFFSQDNVKVGD 169 (514)
Q Consensus 156 ~~G~~~~D~v~igg 169 (514)
+.|.+++|+|+|++
T Consensus 83 ~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 83 LSGYLSQDTVSVPC 96 (97)
T ss_dssp EEEEEEEEEEEESC
T ss_pred EEEEEEEEEEEECC
Confidence 99999999999986
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.84 E-value=4.9e-21 Score=156.35 Aligned_cols=87 Identities=72% Similarity=1.234 Sum_probs=77.1
Q ss_pred CCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceEEeccCccceeEeeeEecccCCCCCCeeEecHhhhcceEEEEECCCC
Q 010251 427 GESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNL 506 (514)
Q Consensus 427 ~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~ 506 (514)
|.|.+||+.+.++|+|+|+|+|++++|+|++|+++...+....|+++|+..+.+ +.++.||||++|||++|+|||++++
T Consensus 1 G~y~v~C~~~~~~P~i~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~-~~~~~~ILGd~Fl~~~y~vfD~~~~ 79 (87)
T 1b5f_B 1 EELQVDCNTLSSMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCISGFTAMDAT-LLGPLWILGDVFMRPYHTVFDYGNL 79 (87)
T ss_dssp CCCEECGGGGGGCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEESEEECCCB-SSSBEEEECHHHHTTEEEEEETTTT
T ss_pred CcEEEECCCCCcCCcEEEEECCEEEEECHHHhEEEccCCCCCEEEEEEEECCCC-CCCCeEEechHHhccEEEEEECCCC
Confidence 579999998888999999999999999999999987654456899999987654 4456899999999999999999999
Q ss_pred eEEEEecC
Q 010251 507 SIGFAEAA 514 (514)
Q Consensus 507 rIGfa~a~ 514 (514)
|||||+++
T Consensus 80 riGfA~~~ 87 (87)
T 1b5f_B 80 LVGFAEAA 87 (87)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcC
Confidence 99999986
No 38
>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum}
Probab=99.61 E-value=2.3e-16 Score=133.49 Aligned_cols=106 Identities=44% Similarity=0.957 Sum_probs=76.6
Q ss_pred cCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCCcccccceeeeccCCCCCCCCCCCcccchhhhHHH
Q 010251 316 ASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAV 395 (514)
Q Consensus 316 ~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (514)
|.|.++..|+.++..||..++++++++.+|..+|.+.|+|..++.+..+++++++++++..+++. .++..|.+|+|++
T Consensus 3 a~g~~~~~C~~~V~~Y~~~ii~~l~~~~~P~~iC~~lglC~~~~~~~~~~~i~~vv~~~~~~~~~--~~~~~C~~Ce~~V 80 (108)
T 3rfi_A 3 AMAIVSMECKTIVSQYGEMIWDLLVSGVRPDQVCSQAGLCFVDGAQHVSSNIKTVVERETEGSSV--GEAPLCTACEMAV 80 (108)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHTTSSCC--------------------------CCHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHcCCcCCCcccccccccccccccccccccC--CCCCcChhHHHHH
Confidence 44566778999999999999999999999999999999999999888889999998876433321 3789999999999
Q ss_pred HHHHHHHhhchhhHHHHhhhhccccCCC
Q 010251 396 IWMQNKLRRNETADQILNYVNQLCDRLP 423 (514)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~ 423 (514)
.|+|+.|+.|.|+++|+.+++++|.++|
T Consensus 81 ~~ie~~L~~N~Te~eI~~~l~k~C~~LP 108 (108)
T 3rfi_A 81 VWMQNQLKQEGTKEKVLEYVNQLCEKIP 108 (108)
T ss_dssp HHHHHHHTSHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHhhCc
Confidence 9999999999999999999999999886
No 39
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=97.17 E-value=0.00013 Score=58.99 Aligned_cols=49 Identities=24% Similarity=0.610 Sum_probs=42.5
Q ss_pred CCcccchhhhHHHHHHHHHHhhchhhHHHHhhhhccccCCCCCCCCeeeeCC
Q 010251 383 HDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCD 434 (514)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~ 434 (514)
.++..|.+|++++.+++++++.|.|+++|..+++++|..+|.. +...|.
T Consensus 3 ~~~~~C~~C~~vv~~i~~~l~~n~t~~~I~~~l~~~C~~lp~~---~~~~C~ 51 (91)
T 2qyp_A 3 VSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKS---LSEECQ 51 (91)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHTSCSS---TTTTHH
T ss_pred CCCCcchHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHCCCC---cccchH
Confidence 3578899999999999999999999999999999999999864 334564
No 40
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=97.17 E-value=0.0002 Score=56.87 Aligned_cols=41 Identities=37% Similarity=0.694 Sum_probs=38.5
Q ss_pred cccchhhhHHHHHHHHHHhhchhhHHHHhhhhccccCCCCC
Q 010251 385 SAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSP 425 (514)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 425 (514)
+..|.+|++++.+++++++.|.|+++|..++++.|..+|.+
T Consensus 3 ~~~C~~C~~~v~~~~~~l~~n~t~~~I~~~l~~~C~~lp~~ 43 (83)
T 4ddj_A 3 SLPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKP 43 (83)
T ss_dssp CHHHHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHTTSCTT
T ss_pred CCcchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHhCCCc
Confidence 56899999999999999999999999999999999999763
No 41
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=97.12 E-value=0.00019 Score=56.38 Aligned_cols=47 Identities=30% Similarity=0.675 Sum_probs=41.5
Q ss_pred cccchhhhHHHHHHHHHHhhchhhHHHHhhhhccccCCCCCCCCeeeeCC
Q 010251 385 SAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCD 434 (514)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~ 434 (514)
+..|..|++++.++++.++.|.|+++|..++++.|..+|.+ +...|.
T Consensus 2 ~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~~---~~~~C~ 48 (80)
T 3bqp_A 2 GGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP---YQKQCD 48 (80)
T ss_dssp CTTHHHHHHHHHHHHHHSCTTCCHHHHHHHHHHHGGGSCGG---GHHHHH
T ss_pred cCcchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCCCc---cchhhH
Confidence 46899999999999999999999999999999999999762 445564
No 42
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=96.54 E-value=0.0011 Score=51.72 Aligned_cols=40 Identities=23% Similarity=0.554 Sum_probs=37.2
Q ss_pred cccchhhhHHHHHHHHHHhhchhhHHHHhhhhccccCCCCC
Q 010251 385 SAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSP 425 (514)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 425 (514)
+..|..|++++..+++++..| |+++|..++++.|..+|.+
T Consensus 2 ~~~C~~C~~vv~~ve~~l~~n-t~~~I~~~l~~~C~~lp~~ 41 (77)
T 1of9_A 2 EILCNLCTGLINTLENLLTTK-GADKVKDYISSLCNKASGF 41 (77)
T ss_dssp CSSHHHHHHHHHHHHHHCSSS-CSHHHHHHHHHHHTTCSST
T ss_pred CCcchhHHHHHHHHHHHHHHC-cHHHHHHHHHHHHHcCChH
Confidence 567999999999999999999 9999999999999999753
No 43
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=96.43 E-value=0.0017 Score=51.29 Aligned_cols=41 Identities=27% Similarity=0.643 Sum_probs=38.1
Q ss_pred CcccchhhhHHHHHHHHHHhhchhhHHHHhhhhccccCCCC
Q 010251 384 DSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPS 424 (514)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 424 (514)
++..|..|++++..++.++..|.|+++|...+++.|..+|.
T Consensus 3 ~~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~ 43 (83)
T 2gtg_A 3 SDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPK 43 (83)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTSSCH
T ss_pred CCCcChhHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHCCC
Confidence 46789999999999999999999999999999999999874
No 44
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=96.41 E-value=0.0015 Score=50.63 Aligned_cols=38 Identities=16% Similarity=0.210 Sum_probs=35.9
Q ss_pred ccchhhhHHHHHHHHHHhhchhhHHHHhhhhccccCCCC
Q 010251 386 AMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPS 424 (514)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 424 (514)
..|..|+.++.+++.++ .|.|+++|...+++.|..+|.
T Consensus 2 ~~C~~C~~~v~~le~~l-~n~Te~~I~~~L~~vC~~l~~ 39 (74)
T 1l9l_A 2 RDYRTCLTIVQKLKKMV-DKPTQRSVSNAATRVCRTGRS 39 (74)
T ss_dssp HHHHHHHHHHHHHHHHC-SSCCHHHHHHHHHHGGGSSCH
T ss_pred CCChHHHHHHHHHHHHh-cccCHHHHHHHHHHHHHhCCh
Confidence 46999999999999999 999999999999999999874
No 45
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=95.96 E-value=0.0025 Score=49.83 Aligned_cols=39 Identities=18% Similarity=0.484 Sum_probs=36.9
Q ss_pred ccchhhhHHHHHHHHHHhhchhhHHHHhhhhccccCCCC
Q 010251 386 AMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPS 424 (514)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 424 (514)
..|..|++++..+++++..|.|+++|...+++.|..+|.
T Consensus 2 ~~C~~C~~iv~~ve~~l~~~~t~~~I~~~l~~~C~~lp~ 40 (78)
T 1nkl_A 2 YFCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKI 40 (78)
T ss_dssp CHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHSCS
T ss_pred CcchHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhhCch
Confidence 469999999999999999999999999999999999875
No 46
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=95.93 E-value=0.0039 Score=49.06 Aligned_cols=40 Identities=30% Similarity=0.537 Sum_probs=37.8
Q ss_pred cccchhhhHHHHHHHHHHhhchhh-HHHHhhhhccccCCCC
Q 010251 385 SAMCSACEMAVIWMQNKLRRNETA-DQILNYVNQLCDRLPS 424 (514)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~c~~~~~ 424 (514)
+..|..|+.++..+++++..|.|+ ++|..++++.|..+|.
T Consensus 3 ~~~C~~C~~~V~~ve~~l~~n~t~~~~I~~~l~~~C~~lp~ 43 (81)
T 1n69_A 3 GDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGP 43 (81)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHGGGGCT
T ss_pred CCcchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHcCc
Confidence 567999999999999999999999 9999999999999974
No 47
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=94.98 E-value=0.0021 Score=52.64 Aligned_cols=53 Identities=19% Similarity=0.349 Sum_probs=43.6
Q ss_pred CCCcccchhhhHHHHHHHHHHhhchhhHHHHhhhhccccCCCCCCCCeeeeCCCC
Q 010251 382 VHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNL 436 (514)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~ 436 (514)
..++..|..|+.++..+++.+ |.|+++|.+.+++.|..+|.....+.-.|..+
T Consensus 18 ~~~~~~C~~C~~vV~~ve~~l--n~t~~~I~~~L~~~C~~lp~~ipf~~~~C~~~ 70 (99)
T 2js9_A 18 GRSALSCQMCELVVKKYEGSA--DKDANVIKKDFDAECKKLFHTIPFGTRECDHY 70 (99)
T ss_dssp -CCSSTHHHHHHHHHHHTTTS--SCCHHHHHHHHHHHHHTGGGGSTTHHHHHHTT
T ss_pred CCCCCcchhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHcCCCcchHHHHHHHHH
Confidence 356789999999999999999 99999999999999999885433355567653
No 48
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=92.93 E-value=0.15 Score=44.39 Aligned_cols=91 Identities=16% Similarity=0.238 Sum_probs=52.8
Q ss_pred cCceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCcccccCCcccCCCCCceeecCeEEEEEeccce--EEEEEEE
Q 010251 85 MDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA--ISGFFSQ 162 (514)
Q Consensus 85 ~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs--~~G~~~~ 162 (514)
....+++++.|+. +++++++|||++.+.+..... ..+.-....+. ... ....|.|. ..|....
T Consensus 23 ~~~~~~v~v~InG--~~~~~LvDTGAs~s~is~~~a---~~lgl~~~~~~----~~~------~~a~g~g~~~~~~~~~~ 87 (148)
T 2i1a_A 23 QVPMLYINIEINN--YPVKAFVDTGAQTTIMSTRLA---KKTGLSRMIDK----RFI------GEARGVGTGKIIGRIHQ 87 (148)
T ss_dssp CCCCCEEEEEETT--EEEEEEECTTCSSCEEEHHHH---HHHTGGGGCBC----CCC-----------------CEEEEE
T ss_pred ccceEEEEEEECC--EEEEEEEECCCCccccCHHHH---HHcCCCccCCc----ceE------EEEecCCCcccccEEEE
Confidence 3567899999997 899999999999988853211 11111111111 111 01122221 3466677
Q ss_pred EEEEECCEEecceeEEEEEecccccccccccceEEeec
Q 010251 163 DNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLG 200 (514)
Q Consensus 163 D~v~igg~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg 200 (514)
+.+.+|+.... ..|.+.. ...+||||+-
T Consensus 88 ~~i~ig~~~~~-~~~~vl~---------~~~d~iLG~d 115 (148)
T 2i1a_A 88 AQVKIETQYIP-CSFTVLD---------TDIDVLIGLD 115 (148)
T ss_dssp EEEEETTEEEE-EEEEEEC---------SSCSEEECHH
T ss_pred EEEEECCEEec-eeEEEec---------CCCCeEecHH
Confidence 89999998764 5555433 1358999985
No 49
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=91.70 E-value=0.41 Score=41.59 Aligned_cols=26 Identities=15% Similarity=0.118 Sum_probs=23.7
Q ss_pred eeEecHhhhcceEEEEECCCCeEEEE
Q 010251 486 LWILGDVFMGRYHTVFDYGNLSIGFA 511 (514)
Q Consensus 486 ~~iLG~~fl~~~y~vfD~~~~rIGfa 511 (514)
..|||..||+++-+..|+.++++-|.
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEc
Confidence 46999999999999999999999774
No 50
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=91.47 E-value=0.17 Score=40.28 Aligned_cols=39 Identities=41% Similarity=0.910 Sum_probs=34.4
Q ss_pred cccchhhHHhhhhhHHHHHHHhccCcccccccCcccccC
Q 010251 320 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFD 358 (514)
Q Consensus 320 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~~~ 358 (514)
+...|+.++..|++.+++++++..+|..+|...++|..+
T Consensus 46 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~~~ 84 (91)
T 2qyp_A 46 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGT 84 (91)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHTCCHHHHHHTTTCC---
T ss_pred cccchHHHHHHHHHHHHHHHHHcCCHHHHHhhcCCCCCc
Confidence 567899999999999999999999999999999999654
No 51
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=89.86 E-value=0.5 Score=41.33 Aligned_cols=90 Identities=14% Similarity=0.266 Sum_probs=53.6
Q ss_pred ceEEEEEEEcCCCceEEEEecCCCCceeeeCCCCCCCcccccCCcccCCCCCceeecCeEEEEEeccc--eEEEEEEEEE
Q 010251 87 AQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTG--AISGFFSQDN 164 (514)
Q Consensus 87 ~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~g--s~~G~~~~D~ 164 (514)
.-|++++.|+. +++++++|||++.+.+..... ..|.-...-+. . +. . ...+-| ...|......
T Consensus 23 ~~l~v~~~Ing--~~v~~LVDTGAs~s~Is~~~A---~rlGL~~~~~~-~---~~-----~-~a~g~G~~~~~g~v~~~~ 87 (148)
T 3s8i_A 23 TMLYINCKVNG--HPLKAFVDSGAQMTIMSQACA---ERCNIMRLVDR-R---WA-----G-VAKGVGTQRIIGRVHLAQ 87 (148)
T ss_dssp CCCEEEEEETT--EEEEEEECTTCSSCEEEHHHH---HHTTCGGGEEG-G---GC-----E-ECCC---CEEEEEEEEEE
T ss_pred CEEEEEEEECC--EEEEEEEeCCCCcEeeCHHHH---HHcCCccccCc-c---ee-----E-EEEcCCccEEEEEEEEEE
Confidence 45899999987 999999999999999864321 12221100000 0 00 0 011112 2567777889
Q ss_pred EEECCEEecceeEEEEEecccccccccccceEEeec
Q 010251 165 VKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLG 200 (514)
Q Consensus 165 v~igg~~v~~~~fg~~~~~~~~~~~~~~~~GIlGLg 200 (514)
+.+|+..+. ..|.+.. ....++||||-
T Consensus 88 I~Ig~~~~~-~~~~Vle--------~~~~d~LLGmD 114 (148)
T 3s8i_A 88 IQIEGDFLQ-CSFSILE--------DQPMDMLLGLD 114 (148)
T ss_dssp EEETTEEEE-EEEEEET--------TCSSSEEECHH
T ss_pred EEECCEEEE-EEEEEeC--------CCCcCeeccHH
Confidence 999997653 4554432 12358999985
No 52
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=89.55 E-value=0.26 Score=37.94 Aligned_cols=37 Identities=24% Similarity=0.749 Sum_probs=34.3
Q ss_pred cccchhhHHhhhhhHHHHHHHhccCcccccccCcccc
Q 010251 320 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCT 356 (514)
Q Consensus 320 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~ 356 (514)
+...|+..+..|++.+++++.+..+|..+|...|+|.
T Consensus 43 ~~~~C~~~v~~y~~~ii~~l~~~~~P~~iC~~l~~C~ 79 (80)
T 3bqp_A 43 YQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACP 79 (80)
T ss_dssp GHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHTTSSC
T ss_pred cchhhHHHHHHHHHHHHHHHHHCCCHHHHHhhcCCCC
Confidence 4677999999999999999999999999999999993
No 53
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=89.52 E-value=0.13 Score=39.84 Aligned_cols=37 Identities=22% Similarity=0.575 Sum_probs=34.5
Q ss_pred cccchhhHHhhhhhHHHHHHHhccCcccccccCcccc
Q 010251 320 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCT 356 (514)
Q Consensus 320 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~ 356 (514)
+...|+..+..|++.+++++.++.+|+.+|...++|.
T Consensus 41 ~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC~ 77 (78)
T 1nkl_A 41 LRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICK 77 (78)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTCSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHCCCHHHHHhccCCCC
Confidence 5577999999999999999999999999999999993
No 54
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=88.53 E-value=0.13 Score=39.72 Aligned_cols=36 Identities=17% Similarity=0.500 Sum_probs=33.6
Q ss_pred cccchhhHHhhhhhHHHHHHHhccCcccccccCccc
Q 010251 320 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLC 355 (514)
Q Consensus 320 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c 355 (514)
+...|+.++..|++.+++++.++.+|+.+|...|+|
T Consensus 42 ~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC 77 (77)
T 1of9_A 42 IATLCTKVLDFGIDKLIQLIEDKVDANAICAKIHAC 77 (77)
T ss_dssp THHHHHHHHHHCHHHHHHHHHHTCCHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCC
Confidence 456799999999999999999999999999999998
No 55
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=88.03 E-value=0.19 Score=39.22 Aligned_cols=37 Identities=43% Similarity=1.006 Sum_probs=34.1
Q ss_pred cccchhhHHhhhhhHHHHHHHhccCcccccccCcccc
Q 010251 320 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCT 356 (514)
Q Consensus 320 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~ 356 (514)
+...|+..+..|++.+++++.+..+|..+|...|+|.
T Consensus 45 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~ 81 (83)
T 2gtg_A 45 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCS 81 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTSCC
T ss_pred chhHHHHHHHHHHHHHHHHHHHCCCHHHHHHhcCCCC
Confidence 3567999999999999999999999999999999994
No 56
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=85.93 E-value=1.2 Score=38.91 Aligned_cols=26 Identities=15% Similarity=0.124 Sum_probs=23.6
Q ss_pred eeEecHhhhcceEEEEECCCCeEEEE
Q 010251 486 LWILGDVFMGRYHTVFDYGNLSIGFA 511 (514)
Q Consensus 486 ~~iLG~~fl~~~y~vfD~~~~rIGfa 511 (514)
..|||..||+++-.+.|++++++-|.
T Consensus 108 d~LLGmD~L~~~~~~ID~~~~~L~l~ 133 (148)
T 3s8i_A 108 DMLLGLDMLRRHQCSIDLKKNVLVIG 133 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEECT
T ss_pred CeeccHHHHHhCCEEEEcCCCEEEEc
Confidence 57999999999999999999998764
No 57
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=85.91 E-value=0.23 Score=40.38 Aligned_cols=36 Identities=25% Similarity=0.578 Sum_probs=34.1
Q ss_pred cccchhhHHhhhhhHHHHHHHhccCcccccccCccc
Q 010251 320 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLC 355 (514)
Q Consensus 320 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c 355 (514)
+...|+..+..|++.+++++....+|..+|..+++|
T Consensus 63 ~~~~C~~~V~~y~~~II~~L~~~~~P~~VC~~L~lC 98 (99)
T 2js9_A 63 GTRECDHYVNSKVDPIIHELEGGTAPKDVCTKLNEC 98 (99)
T ss_dssp HHHHHHTTTTTTHHHHHHHHHHTCCTTHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCC
Confidence 556799999999999999999999999999999999
No 58
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=82.82 E-value=0.46 Score=36.94 Aligned_cols=36 Identities=39% Similarity=0.876 Sum_probs=32.9
Q ss_pred ccchhhHHhhhhhHHHHHHHhc-cCcccccccCcccc
Q 010251 321 SQECKTLVDQYGKTILEMLIAE-TQPQKICSQMGLCT 356 (514)
Q Consensus 321 ~~~c~~~~~~y~~~~~~~~~~~-~~~~~~~~~~~~c~ 356 (514)
...|+..++.|++.+++++.++ .+|..+|...|+|.
T Consensus 46 ~~~C~~~v~~y~~~ii~~l~~~~~~p~~vC~~l~lC~ 82 (83)
T 4ddj_A 46 SASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCE 82 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHTTSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHccCCHHHHHhHcCCCC
Confidence 5679999999999999999988 49999999999994
No 59
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=82.73 E-value=0.44 Score=37.01 Aligned_cols=36 Identities=31% Similarity=0.849 Sum_probs=30.4
Q ss_pred cccchhhHHhhhhhHHHHHHHhccCcccccccCcccc
Q 010251 320 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCT 356 (514)
Q Consensus 320 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c~ 356 (514)
+...|+..+.+||+.+.+++ ++.+|..+|...|+|.
T Consensus 45 ~~~~C~~~V~~y~~~ii~~l-~~~~P~~iC~~lglC~ 80 (81)
T 1n69_A 45 MADICKNYISQYSEIAIQMM-MHMQPKEICALVGFCD 80 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TTSCHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHH-hcCCHHHHHhhcCCCC
Confidence 45679999999999766654 5799999999999993
No 60
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=82.03 E-value=0.62 Score=35.65 Aligned_cols=33 Identities=21% Similarity=0.605 Sum_probs=29.6
Q ss_pred cccchhhHHhhhhhHHHHHHHhccCcccccccC
Q 010251 320 ISQECKTLVDQYGKTILEMLIAETQPQKICSQM 352 (514)
Q Consensus 320 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 352 (514)
+...|+..++.|++.++++++++.+|+.+|...
T Consensus 41 ~~~~C~~~V~~y~~~Ii~~L~~~~~P~~IC~~i 73 (74)
T 1l9l_A 41 WRDVCRNFMRRYQSRVIQGLVAGETAQQICEDL 73 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhc
Confidence 456699999999999999999999999999754
No 61
>3vcm_P Prorenin; aspartic proteases, hydrolase; HET: NAG; 2.93A {Homo sapiens}
Probab=76.83 E-value=2 Score=28.93 Aligned_cols=24 Identities=13% Similarity=-0.117 Sum_probs=20.0
Q ss_pred ceEEEeeeeeccchhhhhccCccc
Q 010251 29 GLVRIGLRKKKLDQINRLVGQTVS 52 (514)
Q Consensus 29 ~~~ripL~~~~~~~~~~~~~~~~~ 52 (514)
.++||||+|.++.++.+.+.+...
T Consensus 7 ~l~RIPL~k~kS~R~~l~e~g~~~ 30 (43)
T 3vcm_P 7 TFKRIFLKRMPSIRESLKERGVDM 30 (43)
T ss_dssp CCEEEEEEECCCHHHHHHHHTCCG
T ss_pred ceeEEeeeecccHHHHHHHcCchH
Confidence 578999999999999888876543
No 62
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=75.46 E-value=3.5 Score=33.34 Aligned_cols=29 Identities=21% Similarity=0.339 Sum_probs=25.0
Q ss_pred EEEEEEcCCCceEEEEecCCCCceeeeCCCC
Q 010251 90 FGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC 120 (514)
Q Consensus 90 ~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C 120 (514)
++.|.||. |.+.+++|||.+++.+.....
T Consensus 10 ~vtvkI~G--q~~eaLLDTGAD~TVl~~~~~ 38 (99)
T 2hs1_A 10 LVTIKIGG--QLKEALLDTGADDTIIEEMSL 38 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSEEESCCSS
T ss_pred EEEEEECC--EEEEEEeccCCCcEEEecccC
Confidence 57799998 999999999999999976544
No 63
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=74.99 E-value=2.9 Score=34.11 Aligned_cols=26 Identities=23% Similarity=0.264 Sum_probs=23.4
Q ss_pred EEEEEEEcCCCceEEEEecCCCCceeee
Q 010251 89 YFGEVSIGTPSQTFTVIFDTGSSNLWVP 116 (514)
Q Consensus 89 Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~ 116 (514)
=++.|.||. |.+.+++|||.+++.+.
T Consensus 9 P~v~v~I~G--q~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 9 PTTIVLIND--TPLNVLLDTGADTSVLT 34 (104)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEEE
T ss_pred CEEEEEECC--EEEEEEeccCCCcEEEc
Confidence 367899997 99999999999999986
No 64
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=69.01 E-value=5.8 Score=31.97 Aligned_cols=29 Identities=24% Similarity=0.286 Sum_probs=24.9
Q ss_pred EEEEEEcCCCceEEEEecCCCCceeeeCCCC
Q 010251 90 FGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC 120 (514)
Q Consensus 90 ~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C 120 (514)
++.|.||. |.+.+++|||.+++-+...+.
T Consensus 10 ~vti~I~G--q~~e~LLDTGAD~TVl~~~~~ 38 (99)
T 3ec0_A 10 VVTAYIEG--QPVEVLLDTGADDSIVAGIEL 38 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEESSCCC
T ss_pred eEEEEECC--EEEEEEEecCCCceEEcCccc
Confidence 67799998 999999999999999965444
No 65
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=66.54 E-value=4.8 Score=33.26 Aligned_cols=32 Identities=19% Similarity=0.280 Sum_probs=26.2
Q ss_pred EEEEEEc---CCCceEEEEecCCCCceeeeCCCCC
Q 010251 90 FGEVSIG---TPSQTFTVIFDTGSSNLWVPSAKCY 121 (514)
Q Consensus 90 ~~~i~IG---tPpQ~~~v~lDTGSs~~WV~~~~C~ 121 (514)
.+.|.|| +|+|.+..++|||.+++.+....+.
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~lP 46 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALFS 46 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGSC
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccCC
Confidence 4556666 7889999999999999999876663
No 66
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=60.81 E-value=7.7 Score=32.23 Aligned_cols=26 Identities=12% Similarity=0.162 Sum_probs=22.5
Q ss_pred EEEEEEcCCCceEEEEecCCCCceeeeCC
Q 010251 90 FGEVSIGTPSQTFTVIFDTGSSNLWVPSA 118 (514)
Q Consensus 90 ~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~ 118 (514)
++ |.||. |.+.+++|||.+++.+...
T Consensus 16 ~v-ikI~G--q~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 16 IL-IFVNG--YPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EE-EEETT--EEEEEEECTTCSSCEEEGG
T ss_pred EE-EEECC--EEEEEEecCCCCcEEEccc
Confidence 45 99997 9999999999999998643
No 67
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=54.67 E-value=13 Score=30.80 Aligned_cols=29 Identities=14% Similarity=0.146 Sum_probs=24.8
Q ss_pred EEEEEEcCCCceEEEEecCCCCceeeeCCCC
Q 010251 90 FGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC 120 (514)
Q Consensus 90 ~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C 120 (514)
.+.|.||. |.+.+++|||.+++-+...+.
T Consensus 11 ~vti~I~G--q~~eaLLDTGADdTVi~~~~l 39 (114)
T 3sqf_A 11 SLTLWLDD--KMFTGLINTGADVTIIKLEDW 39 (114)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEEEGGGS
T ss_pred eEEEEECC--EEEEEEEccCCCceEEecccC
Confidence 56788888 999999999999999976554
No 68
>1htr_P Progastricsin (Pro segment); aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_P
Probab=54.24 E-value=5.6 Score=26.09 Aligned_cols=23 Identities=17% Similarity=0.085 Sum_probs=18.6
Q ss_pred eEEEeeeeeccchhhhhccCccc
Q 010251 30 LVRIGLRKKKLDQINRLVGQTVS 52 (514)
Q Consensus 30 ~~ripL~~~~~~~~~~~~~~~~~ 52 (514)
++||||+|.++.++.+.+.+...
T Consensus 2 l~RIpL~K~~s~R~~l~~~g~~~ 24 (43)
T 1htr_P 2 VVKVPLKKFKSIRETMKEKGLLG 24 (43)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHH
T ss_pred eEEEeeeEcchHHHHHHHcCcHH
Confidence 68999999999988887766543
No 69
>1tzs_P Activation peptide from cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=53.50 E-value=5 Score=24.92 Aligned_cols=23 Identities=17% Similarity=0.158 Sum_probs=17.8
Q ss_pred ceEEEeeeeeccchhhhhccCcc
Q 010251 29 GLVRIGLRKKKLDQINRLVGQTV 51 (514)
Q Consensus 29 ~~~ripL~~~~~~~~~~~~~~~~ 51 (514)
+++||||+|.++.++.+.+.+..
T Consensus 2 ~l~rIpL~K~~s~r~~l~~~g~~ 24 (35)
T 1tzs_P 2 SLHRVPLRRHPSLKKKLRARSQL 24 (35)
T ss_pred cEEEEEeEEchHHHHHHHHcccH
Confidence 47899999998888877665543
No 70
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=47.30 E-value=21 Score=30.22 Aligned_cols=30 Identities=20% Similarity=0.252 Sum_probs=25.1
Q ss_pred eEEEEEEEcCCCceEEEEecCCCCceeeeCCC
Q 010251 88 QYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAK 119 (514)
Q Consensus 88 ~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~ 119 (514)
.=++.+.|+. |.+.+++|||.+++.+....
T Consensus 22 RP~v~i~I~G--~~~~~LlDTGAd~tVl~~~~ 51 (132)
T 3slz_A 22 EPRITLKVGG--QPVTFLVDTGAQHSVLTQNP 51 (132)
T ss_dssp SSEEEEEETT--EEEEEEECTTCSSCEECSCC
T ss_pred CCEEEEEECC--EEEEEEEeCCCCeEEEcccc
Confidence 3467799998 99999999999999986543
No 71
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=40.09 E-value=24 Score=32.27 Aligned_cols=28 Identities=21% Similarity=0.312 Sum_probs=24.2
Q ss_pred EEEEEEEcCCCceEEEEecCCCCceeeeCC
Q 010251 89 YFGEVSIGTPSQTFTVIFDTGSSNLWVPSA 118 (514)
Q Consensus 89 Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~ 118 (514)
-.+.|.||. |.+.+++|||.+++-+...
T Consensus 9 P~vtv~I~G--q~~e~LLDTGAD~TVl~~~ 36 (203)
T 3ka2_A 9 PLVTIRIGG--QLKEALLDTGADDTVIEEL 36 (203)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEECSC
T ss_pred CeEEEEECC--EEEEEEEecCCCceEEecc
Confidence 467899998 9999999999999998643
No 72
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=38.42 E-value=29 Score=29.06 Aligned_cols=24 Identities=13% Similarity=0.214 Sum_probs=19.9
Q ss_pred EcCCCceEEEEecCCCCceeeeCCCC
Q 010251 95 IGTPSQTFTVIFDTGSSNLWVPSAKC 120 (514)
Q Consensus 95 IGtPpQ~~~v~lDTGSs~~WV~~~~C 120 (514)
||. |.+..++|||.+++.+.....
T Consensus 27 i~g--q~~eaLLDTGAD~TVl~~~~l 50 (124)
T 2rsp_A 27 QRS--VYITALLDSGADITIISEEDW 50 (124)
T ss_dssp CSE--EEEEEEECTTCSSCEEETTTS
T ss_pred CCC--EEEEEEecCCCCcEEEecccC
Confidence 554 788999999999999986655
No 73
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=36.74 E-value=13 Score=29.18 Aligned_cols=41 Identities=27% Similarity=0.483 Sum_probs=35.0
Q ss_pred ccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCccc
Q 010251 315 GASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLC 355 (514)
Q Consensus 315 ~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~c 355 (514)
++..+.+..|+.++++|.+.+++++=+..+|..+|...+.|
T Consensus 47 ~~ip~a~k~C~~~v~~~~d~II~eLe~g~~P~~VC~~L~~C 87 (87)
T 3s64_A 47 GWLPYAEKECKALAKIEMGAIKTLLENGSAPEEICTTLHAC 87 (87)
T ss_dssp CSSTTHHHHHHHHHHHHHHHHHHHHHTTCCTTTHHHHHHCC
T ss_pred ccCCchHHHHHHHHHHhHHHHHHHHHcCCCHHHHHHHhccC
Confidence 44444567799999999999999999999999999987766
No 74
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=31.22 E-value=51 Score=31.88 Aligned_cols=42 Identities=26% Similarity=0.215 Sum_probs=30.5
Q ss_pred ccceEEEecccCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHH
Q 010251 254 KGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 305 (514)
Q Consensus 254 ~g~l~~~pl~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~ 305 (514)
.|.+...|+.....|.++ |.||.+ ...+++|||++.+++|..
T Consensus 3 ~g~v~~~~~~~~~~Y~~~---i~iG~Q-------~~~v~~DTGSs~lWv~~~ 44 (323)
T 1bxo_A 3 SGVATNTPTANDEEYITP---VTIGGT-------TLNLNFDTGSADLWVFST 44 (323)
T ss_dssp CEEEEEEECGGGSCEEEE---EEETTE-------EEEEEEETTCCCEEECBT
T ss_pred CCceeeeecCCCCEEEEE---EEECCE-------EEEEEEeCCCcceEEecC
Confidence 355666777666677654 677743 347999999999999864
No 75
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=29.59 E-value=54 Score=31.73 Aligned_cols=41 Identities=15% Similarity=0.085 Sum_probs=29.8
Q ss_pred cceEEEecccCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHH
Q 010251 255 GEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 305 (514)
Q Consensus 255 g~l~~~pl~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~ 305 (514)
|.+...|+.....|.++ |.||.+ ...+++|||++.+++|..
T Consensus 3 ~~v~~~~~~~~~~Y~~~---i~iG~Q-------~~~v~~DTGSs~lWv~~~ 43 (325)
T 1ibq_A 3 GSAVTTPQNNDEEYLTP---VTVGKS-------TLHLDFDTGSADLWVFSD 43 (325)
T ss_dssp EEEEEEECTTTSCEEEE---EEEBTE-------EEEEEEETTCCCEEEECT
T ss_pred ceEEeEEcCCCCEEEEE---EEECCE-------EEEEEEeCCCccceEeeC
Confidence 45566677666777654 667733 347999999999999864
No 76
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=28.41 E-value=61 Score=31.36 Aligned_cols=41 Identities=17% Similarity=0.149 Sum_probs=29.6
Q ss_pred cceEEEecccCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHH
Q 010251 255 GEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 305 (514)
Q Consensus 255 g~l~~~pl~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~ 305 (514)
|.+...|+.....|.++ |.||.+ ...+++|||++.+++|..
T Consensus 4 ~~v~~~~~~~~~~Y~~~---i~iG~q-------~~~v~~DTGSs~lWv~~~ 44 (323)
T 1izd_A 4 GSVTTNPTSNDEEYITQ---VTVGDD-------TLGLDFDTGSADLWVFSS 44 (323)
T ss_dssp EEEEEEECGGGCCEEEE---EEETTE-------EEEEEEETTCCCEEECBT
T ss_pred CceeeeEcCCCCEEEEE---EEECCE-------EEEEEEcCCCcceEEecC
Confidence 55566677666667654 677733 347999999999999964
No 77
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=28.26 E-value=10 Score=29.77 Aligned_cols=37 Identities=27% Similarity=0.430 Sum_probs=31.2
Q ss_pred CcccchhhhHHHHHHHHHHhhchhhHHHHhhhhccccCC
Q 010251 384 DSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRL 422 (514)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 422 (514)
++..|..|++++..++.++-+ +..+|...+.+.|...
T Consensus 9 ~~l~C~~C~~~Vk~~e~~i~~--~~~eie~~~d~~Ckk~ 45 (87)
T 3s64_A 9 NVIVCEICKMAVKLIVPEADK--DLDQLEKEFIQGCMTL 45 (87)
T ss_dssp CTTHHHHHHHHHHHHTTCSSC--SSTTHHHHHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHhccC--CHHHHHHHHHHHHHHh
Confidence 457899999999999999865 5557999999999765
No 78
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=22.15 E-value=50 Score=32.45 Aligned_cols=44 Identities=16% Similarity=0.094 Sum_probs=29.9
Q ss_pred ccceEEEeccc--CCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHH
Q 010251 254 KGEHTYVPVTK--KGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 305 (514)
Q Consensus 254 ~g~l~~~pl~~--~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~ 305 (514)
+|.+...|+.. ...|.+ .|.||.- .+...+++|||++.+++|..
T Consensus 4 ~g~~~~~~l~~~~~~~Y~~---~i~iGtP-----~q~~~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFDLEEYAI---PVSIGTP-----GQDFYLLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETTTTEEEE---EEEETTT-----TEEEEEEEETTCCCCEEEBT
T ss_pred CCccceEEeecCCCCEEEE---EEEECCC-----CcEEEEEEcCCCCCeEECCC
Confidence 45666777754 456655 4677742 23457999999999999853
No 79
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=21.89 E-value=94 Score=28.50 Aligned_cols=38 Identities=24% Similarity=0.225 Sum_probs=26.1
Q ss_pred eEeceeccCceEEEE---EEEcCC-----CceEEEEecCCCCceeeeC
Q 010251 78 IVALNNFMDAQYFGE---VSIGTP-----SQTFTVIFDTGSSNLWVPS 117 (514)
Q Consensus 78 ~~~l~n~~~~~Y~~~---i~IGtP-----pQ~~~v~lDTGSs~~WV~~ 117 (514)
.+|+.+ ...|.++ |.||.- .....+++|||++.+++|.
T Consensus 181 ~~p~~~--~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~ 226 (239)
T 1b5f_A 181 YVPVTY--QYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPT 226 (239)
T ss_dssp EEEEEE--ETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECH
T ss_pred EEEccc--CCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCH
Confidence 345544 2345554 788862 3457899999999999975
No 80
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=21.27 E-value=61 Score=31.39 Aligned_cols=43 Identities=21% Similarity=0.031 Sum_probs=28.9
Q ss_pred cceEEE-ecccCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHH
Q 010251 255 GEHTYV-PVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 305 (514)
Q Consensus 255 g~l~~~-pl~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~ 305 (514)
|.+... |......|.+ .|.||. +.+...+++|||++.+++|..
T Consensus 3 ~~v~~~~~~~~~~~Y~~---~i~iGT-----P~Q~~~v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 3 GSATTTPIDSLDDAYIT---PVQIGT-----PAQTLNLDFDTGSSDLWVFSS 46 (329)
T ss_dssp EEEEEEESSTTCCCEEE---EEEETT-----TTEEEEEEEETTCCCEEECBT
T ss_pred ceeEeeecCCCCCEEEE---EEEECC-----CCeEEEEEECCCCCCeEEecC
Confidence 344455 5555666765 467774 223457999999999999863
No 81
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=20.99 E-value=77 Score=31.70 Aligned_cols=42 Identities=10% Similarity=0.187 Sum_probs=26.3
Q ss_pred ceEeceeccCceEEEE---EEEcCC------CceE--------EEEecCCCCceeeeCC
Q 010251 77 DIVALNNFMDAQYFGE---VSIGTP------SQTF--------TVIFDTGSSNLWVPSA 118 (514)
Q Consensus 77 ~~~~l~n~~~~~Y~~~---i~IGtP------pQ~~--------~v~lDTGSs~~WV~~~ 118 (514)
..+|+.......|.++ |+||.- +..+ .+++|||++.+++|..
T Consensus 218 ~~~Pl~~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~ 276 (403)
T 3aup_A 218 AFTPLTITLQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQS 276 (403)
T ss_dssp EEEECEECTTSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHH
T ss_pred eecccccCCCCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHH
Confidence 3567765433466664 678861 1112 1899999999999753
No 82
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=20.09 E-value=67 Score=31.10 Aligned_cols=43 Identities=16% Similarity=-0.012 Sum_probs=28.6
Q ss_pred cceEEE-ecccCCceEEEEceEEECCeeecccCCCceEEEcCCCCCcccCHH
Q 010251 255 GEHTYV-PVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 305 (514)
Q Consensus 255 g~l~~~-pl~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTs~i~lp~~ 305 (514)
|.+... |......|.+ .|.||. +.+...+++|||++.+++|..
T Consensus 3 ~~v~~~~~~~~~~~Y~~---~i~iGT-----P~Q~~~v~~DTGSs~lWv~~~ 46 (329)
T 3c9x_A 3 GSAPNHPSDSADSEYIT---SVSIGT-----PAQVLPLDFDTGSSDLWVFSS 46 (329)
T ss_dssp EEEEEEESSTTCCCEEE---EEEETT-----TTEEEEEEEETTCCCEEECBT
T ss_pred cceeeecCCCCCCEEEE---EEEECC-----CCeEEEEEEcCCCCCeEEecC
Confidence 344455 5545566665 467774 223457999999999999864
Done!