Query 010253
Match_columns 514
No_of_seqs 434 out of 2113
Neff 5.5
Searched_HMMs 46136
Date Thu Mar 28 22:50:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010253.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010253hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4188 Uncharacterized conser 100.0 2.1E-35 4.6E-40 265.1 7.6 156 315-514 2-159 (159)
2 KOG0719 Molecular chaperone (D 100.0 4.3E-30 9.3E-35 248.9 12.2 153 203-374 13-176 (264)
3 PF12572 DUF3752: Protein of u 99.9 1.7E-27 3.8E-32 221.3 8.9 129 371-506 18-152 (152)
4 COG0484 DnaJ DnaJ-class molecu 99.8 4.8E-21 1E-25 199.2 7.5 72 203-274 3-75 (371)
5 KOG0713 Molecular chaperone (D 99.8 9.4E-21 2E-25 193.1 6.8 92 203-296 15-108 (336)
6 KOG0712 Molecular chaperone (D 99.7 3.8E-18 8.3E-23 175.5 6.2 69 203-273 3-71 (337)
7 PRK14288 chaperone protein Dna 99.7 6.7E-18 1.5E-22 177.5 7.7 68 204-271 3-71 (369)
8 PRK14296 chaperone protein Dna 99.7 8E-18 1.7E-22 177.1 7.6 69 203-271 3-71 (372)
9 PRK14279 chaperone protein Dna 99.7 5.6E-17 1.2E-21 171.7 7.4 67 204-270 9-76 (392)
10 KOG0691 Molecular chaperone (D 99.7 9.1E-17 2E-21 163.6 8.0 74 203-276 4-78 (296)
11 PRK14286 chaperone protein Dna 99.7 8.8E-17 1.9E-21 169.2 7.9 70 203-272 3-73 (372)
12 PTZ00037 DnaJ_C chaperone prot 99.7 6.4E-17 1.4E-21 172.6 6.6 67 203-272 27-93 (421)
13 PRK14287 chaperone protein Dna 99.7 1.1E-16 2.5E-21 168.3 7.9 70 203-272 3-72 (371)
14 PRK14283 chaperone protein Dna 99.6 1.7E-16 3.6E-21 167.4 7.6 69 203-271 4-72 (378)
15 PRK14276 chaperone protein Dna 99.6 1.5E-16 3.3E-21 167.8 7.1 70 203-272 3-72 (380)
16 PRK14299 chaperone protein Dna 99.6 1.9E-16 4.1E-21 161.6 7.5 68 204-271 4-71 (291)
17 PRK14298 chaperone protein Dna 99.6 2E-16 4.3E-21 166.8 7.0 68 204-271 5-72 (377)
18 PRK14291 chaperone protein Dna 99.6 2.3E-16 5E-21 166.6 7.4 69 204-272 3-71 (382)
19 PRK14278 chaperone protein Dna 99.6 2.2E-16 4.8E-21 166.5 7.2 68 204-271 3-70 (378)
20 PF00226 DnaJ: DnaJ domain; I 99.6 3.1E-16 6.7E-21 124.3 5.9 62 205-266 1-64 (64)
21 PRK14280 chaperone protein Dna 99.6 3E-16 6.4E-21 165.4 7.5 69 204-272 4-72 (376)
22 PRK14282 chaperone protein Dna 99.6 3.6E-16 7.7E-21 164.4 7.6 70 203-272 3-74 (369)
23 PRK14285 chaperone protein Dna 99.6 3.7E-16 8E-21 164.1 7.2 69 204-272 3-72 (365)
24 PRK14277 chaperone protein Dna 99.6 4.6E-16 1E-20 164.5 7.5 69 204-272 5-74 (386)
25 PRK14294 chaperone protein Dna 99.6 5.4E-16 1.2E-20 162.9 7.9 70 203-272 3-73 (366)
26 KOG0716 Molecular chaperone (D 99.6 5.4E-16 1.2E-20 154.2 6.6 72 203-274 30-102 (279)
27 PRK14284 chaperone protein Dna 99.6 8.9E-16 1.9E-20 162.6 7.5 68 204-271 1-69 (391)
28 PRK14297 chaperone protein Dna 99.6 6.9E-16 1.5E-20 162.8 6.5 69 204-272 4-73 (380)
29 PRK14295 chaperone protein Dna 99.6 9.8E-16 2.1E-20 162.2 7.5 67 204-270 9-80 (389)
30 KOG0717 Molecular chaperone (D 99.6 7.1E-16 1.5E-20 162.1 6.3 69 203-271 7-77 (508)
31 PRK14301 chaperone protein Dna 99.6 8.8E-16 1.9E-20 161.7 7.0 68 204-271 4-72 (373)
32 PRK10767 chaperone protein Dna 99.6 1.6E-15 3.5E-20 159.5 7.5 70 203-272 3-73 (371)
33 KOG0718 Molecular chaperone (D 99.6 1E-15 2.2E-20 161.1 5.8 72 203-274 8-83 (546)
34 PRK14281 chaperone protein Dna 99.6 1.6E-15 3.5E-20 161.0 7.2 69 204-272 3-72 (397)
35 PRK10266 curved DNA-binding pr 99.6 2.6E-15 5.7E-20 154.1 7.5 67 204-270 4-70 (306)
36 TIGR02349 DnaJ_bact chaperone 99.6 2.2E-15 4.8E-20 157.5 7.0 68 205-272 1-68 (354)
37 PRK14300 chaperone protein Dna 99.6 2.2E-15 4.7E-20 158.7 6.8 69 204-272 3-71 (372)
38 PTZ00341 Ring-infected erythro 99.6 2.5E-15 5.5E-20 169.6 7.4 72 202-273 571-642 (1136)
39 PRK14292 chaperone protein Dna 99.6 3.1E-15 6.8E-20 157.3 7.0 68 204-271 2-69 (371)
40 PRK14293 chaperone protein Dna 99.6 3.6E-15 7.7E-20 157.1 7.3 68 204-271 3-70 (374)
41 KOG0715 Molecular chaperone (D 99.6 4.1E-15 9E-20 151.7 7.1 69 204-272 43-111 (288)
42 PRK14289 chaperone protein Dna 99.6 5.2E-15 1.1E-19 156.4 7.9 69 203-271 4-73 (386)
43 PRK14290 chaperone protein Dna 99.5 4.5E-15 9.8E-20 155.9 6.8 68 204-271 3-72 (365)
44 smart00271 DnaJ DnaJ molecular 99.5 2.4E-14 5.3E-19 111.6 6.1 57 204-260 1-59 (60)
45 cd06257 DnaJ DnaJ domain or J- 99.5 6E-14 1.3E-18 107.4 6.4 54 205-258 1-55 (55)
46 KOG0720 Molecular chaperone (D 99.4 1.7E-13 3.6E-18 144.5 8.5 81 192-274 225-305 (490)
47 TIGR03835 termin_org_DnaJ term 99.4 1.1E-13 2.4E-18 153.5 7.0 69 204-272 2-70 (871)
48 COG2214 CbpA DnaJ-class molecu 99.4 1.5E-13 3.2E-18 129.4 6.9 67 203-269 5-73 (237)
49 KOG0721 Molecular chaperone (D 99.4 1.7E-13 3.7E-18 132.7 6.8 71 203-273 98-169 (230)
50 PHA03102 Small T antigen; Revi 99.4 3.4E-13 7.5E-18 125.7 4.4 67 204-273 5-73 (153)
51 PRK05014 hscB co-chaperone Hsc 99.3 7.7E-12 1.7E-16 118.8 7.2 67 204-270 1-75 (171)
52 PRK01356 hscB co-chaperone Hsc 99.3 1.1E-11 2.4E-16 117.3 7.8 67 204-270 2-74 (166)
53 KOG0722 Molecular chaperone (D 99.2 5.5E-12 1.2E-16 124.7 4.1 74 200-273 29-102 (329)
54 PRK00294 hscB co-chaperone Hsc 99.2 2.7E-11 5.8E-16 115.4 8.1 69 202-270 2-78 (173)
55 KOG0624 dsRNA-activated protei 99.2 2.3E-11 5E-16 125.2 6.7 81 191-271 380-465 (504)
56 PRK03578 hscB co-chaperone Hsc 99.2 4.3E-11 9.2E-16 114.3 7.7 67 203-269 5-79 (176)
57 COG5269 ZUO1 Ribosome-associat 99.2 6.6E-11 1.4E-15 118.0 7.9 196 197-401 36-261 (379)
58 KOG0714 Molecular chaperone (D 99.1 3.5E-11 7.5E-16 118.9 4.2 67 204-270 3-71 (306)
59 PHA02624 large T antigen; Prov 99.1 5.1E-11 1.1E-15 131.2 5.4 93 204-306 11-108 (647)
60 KOG0550 Molecular chaperone (D 99.1 7.7E-11 1.7E-15 123.6 5.0 91 200-294 369-461 (486)
61 KOG1150 Predicted molecular ch 99.0 4.8E-10 1E-14 107.7 8.0 81 192-272 37-123 (250)
62 PRK09430 djlA Dna-J like membr 99.0 4.7E-10 1E-14 113.6 5.3 55 204-258 200-262 (267)
63 PTZ00100 DnaJ chaperone protei 99.0 5.8E-10 1.3E-14 99.6 4.6 51 204-257 65-115 (116)
64 COG5407 SEC63 Preprotein trans 98.8 3.4E-09 7.5E-14 111.9 5.7 73 202-274 96-174 (610)
65 PRK01773 hscB co-chaperone Hsc 98.8 7.8E-09 1.7E-13 98.6 7.1 67 204-270 2-76 (173)
66 TIGR00714 hscB Fe-S protein as 98.7 2.8E-08 6E-13 93.4 7.0 56 215-270 2-63 (157)
67 KOG1789 Endocytosis protein RM 97.9 1.4E-05 3.1E-10 91.6 6.1 53 203-257 1280-1336(2235)
68 KOG0568 Molecular chaperone (D 97.8 1.7E-05 3.7E-10 78.3 4.5 55 204-258 47-102 (342)
69 KOG0723 Molecular chaperone (D 96.5 0.004 8.7E-08 55.0 4.9 49 208-259 60-108 (112)
70 KOG3192 Mitochondrial J-type c 96.2 0.0056 1.2E-07 57.6 4.4 67 204-270 8-82 (168)
71 KOG0431 Auxilin-like protein a 95.5 0.02 4.4E-07 62.6 5.7 44 212-255 396-447 (453)
72 COG1076 DjlA DnaJ-domain-conta 94.3 0.043 9.4E-07 52.4 3.9 53 204-256 113-173 (174)
73 COG1076 DjlA DnaJ-domain-conta 93.4 0.053 1.2E-06 51.8 2.7 65 206-270 3-75 (174)
74 PF03656 Pam16: Pam16; InterP 83.7 1.8 3.9E-05 39.8 4.7 50 206-258 60-109 (127)
75 PRK05339 PEP synthetase regula 75.3 7.5 0.00016 40.1 6.5 71 2-87 17-99 (269)
76 KOG0724 Zuotin and related mol 71.2 4.1 8.8E-05 42.5 3.6 54 216-269 4-62 (335)
77 PF03618 Kinase-PPPase: Kinase 70.7 13 0.00029 38.0 7.1 72 2-88 11-94 (255)
78 PF13446 RPT: A repeated domai 43.8 38 0.00082 26.6 4.0 27 204-230 5-31 (62)
79 PF14687 DUF4460: Domain of un 35.2 70 0.0015 28.7 4.8 43 215-257 5-52 (112)
80 COG5552 Uncharacterized conser 34.3 1.3E+02 0.0027 25.5 5.7 47 203-249 2-48 (88)
81 PF11833 DUF3353: Protein of u 31.7 90 0.002 30.7 5.3 38 213-257 1-38 (194)
82 PRK02363 DNA-directed RNA poly 28.3 97 0.0021 28.6 4.5 64 1-70 3-70 (129)
83 PF10041 DUF2277: Uncharacteri 25.5 1.8E+02 0.0039 24.7 5.1 45 204-248 3-47 (78)
84 PF11731 Cdd1: Pathogenicity l 20.3 1.4E+02 0.0029 26.2 3.7 49 1-49 1-52 (93)
No 1
>KOG4188 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=2.1e-35 Score=265.07 Aligned_cols=156 Identities=49% Similarity=0.810 Sum_probs=134.2
Q ss_pred ccccccccCCchhhhhhhhcccccHHHHHhhccCCchhHHHHHhhhcCCCCCCCccccccccCCCCCCCCCCCCCCChHH
Q 010253 315 PKRDEWMTTLPPERKVRAFSLSTASQLLFLKVQCPVPLLTVTVSSLQPGGGVPMHSTKTFSRTSKEGRGDTSVWTDTPSD 394 (514)
Q Consensus 315 ~~re~WMt~LpeE~~~~~Y~~~~dm~~i~~~v~~De~Rf~~iI~~~I~~g~l~~~~~~~F~~~~~~~~~d~S~WTeTP~~ 394 (514)
+.||+|||.||+++. . +++... +++|++++..++||+|+||+||.+
T Consensus 2 pkReeWMt~lP~e~~--------------------------------~-~gl~~~-~rTFkrga~~~sgd~ssWtdtP~d 47 (159)
T KOG4188|consen 2 PKREEWMTTLPPERK--------------------------------V-FGLGQQ-SRTFKRGAREGSGDRSSWTDTPMD 47 (159)
T ss_pred chHHHHHHhCCchhc--------------------------------c-cccccc-chhhhcccccCCCcccccccCccc
Confidence 479999999999987 2 245444 799999999999999999999999
Q ss_pred HHHHHHhhhhhhhhhhhhhhchHHHhhhhhHHHHHHHHHHhhcCCcchHHHhHHHhhhhhhhhcCCCCccccccCCCCCC
Q 010253 395 RAQKAKMNYLEAYSETSALASTEEEKKGARADADLVDKYNKEKRSKSLVQKHQEEGKTRAKKKSKQQPEKEEWVGEHPWK 474 (514)
Q Consensus 395 k~~r~~~~~~~~~~~~~a~~~~~~~~~~~~~~~e~v~~~n~~~R~~SLle~Hq~k~k~~~~~~~~~~~~k~~~~~~~~~r 474 (514)
|++|+++.++..+..+.++.+.+.+..+..+++++|+.||+++|++||||+||+++.++.+ .+|...++||
T Consensus 48 ke~rak~t~~ars~sskale~~~~~~~~~~rdaeqvs~~nkkkr~eSLvEiHqkk~~sK~k---------d~~~~q~err 118 (159)
T KOG4188|consen 48 KERRAKETYLARSNSSKALESNEGENMKRSRDAEQVSKYNKKKRAESLVEIHQKKLSSKEK---------DEWKPQHERR 118 (159)
T ss_pred HHHHHHhhhhhhhhhhHHHHHhhhhhhhhhhhHHHHHHHHhhhcchHHHHHHHHHHhHHHH---------hcccCcccCC
Confidence 9999999988777777777777777777889999999999999999999999999987632 2345567899
Q ss_pred CCchhhhcccCCCC--ccccHHHHhcccCCCCCCCcccCCCC
Q 010253 475 PWDREKDLVAGRQN--IKFDSENMAEGLSSRFSSGNFQRNFL 514 (514)
Q Consensus 475 pFDRekDl~~~~~~--~~~~~~~~a~~l~sRFs~g~~~r~FL 514 (514)
|||||+||.|++++ ...+.+.+|++|++|||+|++| .||
T Consensus 119 PfdRekDlkv~r~d~n~kk~avdkak~latkFs~gk~q-rfl 159 (159)
T KOG4188|consen 119 PFDREKDLKVNRQDPNQKKDAVDKAKELATKFSSGKFQ-RFL 159 (159)
T ss_pred CccccccccccccCcchhHHHHHHHHHHHHHhccCccc-ccC
Confidence 99999999999994 4445589999999999999999 565
No 2
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=4.3e-30 Score=248.87 Aligned_cols=153 Identities=25% Similarity=0.353 Sum_probs=136.2
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCC---hhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhHHHHHhHH
Q 010253 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH---PQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEEQEKFK 279 (514)
Q Consensus 203 ~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~---~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~~~~~~~ 279 (514)
..|+|+||||..+|+..+|++||++|+|++|||+++. ..++++|++|+.||+||+|.++|+.||++|...+....
T Consensus 13 ~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~idd~~~d-- 90 (264)
T KOG0719|consen 13 KKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSIDDESGD-- 90 (264)
T ss_pred ccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCccch--
Confidence 3699999999999999999999999999999999973 46899999999999999999999999999988744322
Q ss_pred HHHhhhhhhhhhhhhcC-CCCCCchhHhhhhccCCCccccccccCCchhhh--hhhhcccc-cHHHHHhhccC----Cch
Q 010253 280 VELKAMQEGAQWRKSQG-ILMEGDDELLADMEVKAPPKRDEWMTTLPPERK--VRAFSLST-ASQLLFLKVQC----PVP 351 (514)
Q Consensus 280 ~e~~~~~~~~~wr~~fg-v~~~~d~e~~~g~~~~~e~~re~WMt~LpeE~~--~~~Y~~~~-dm~~i~~~v~~----De~ 351 (514)
-..+|..+|+.+|. |+.+++++|.+ .|..++ +|.. +.+|+.++ +|..|++++|| |++
T Consensus 91 ---~~~~~~e~~~~iyk~VteedIeef~a-~Y~gSE-----------eEk~Dl~~~Y~k~kG~m~~i~~~~l~~d~~De~ 155 (264)
T KOG0719|consen 91 ---IDEDWLEFWRAIYKKVTEEDIEEFEA-NYQGSE-----------EEKKDLLKLYNKFKGKMNRILESVLCSDPKDED 155 (264)
T ss_pred ---hhhHHHHHHHHHHhhcccccHHHHHH-HhcccH-----------HHHHHHHHHHHhcCChHHHHHHhhhcCCcccHH
Confidence 23578999999998 99999999987 887776 6664 88999877 99999999999 899
Q ss_pred hHHHHHhhhcCCCCCCCcccccc
Q 010253 352 LLTVTVSSLQPGGGVPMHSTKTF 374 (514)
Q Consensus 352 Rf~~iI~~~I~~g~l~~~~~~~F 374 (514)
||.+||+.+|.+|+|+.| +.|
T Consensus 156 R~keiid~~I~~Gev~~y--K~y 176 (264)
T KOG0719|consen 156 RFKEIIDEAIADGEVKKY--KAY 176 (264)
T ss_pred HHHHHHHHHHhcCCchhh--hhc
Confidence 999999999999999998 564
No 3
>PF12572 DUF3752: Protein of unknown function (DUF3752); InterPro: IPR022226 This domain family is found in eukaryotes, and is typically between 140 and 163 amino acids in length.
Probab=99.94 E-value=1.7e-27 Score=221.27 Aligned_cols=129 Identities=37% Similarity=0.567 Sum_probs=105.6
Q ss_pred ccccccCCCCCCCCCCCCCCChHHHHHHHHhhhhhhhhhhhhhh---chHHHhhhhhHHHHHHHHHHhhcCCcchHHHhH
Q 010253 371 TKTFSRTSKEGRGDTSVWTDTPSDRAQKAKMNYLEAYSETSALA---STEEEKKGARADADLVDKYNKEKRSKSLVQKHQ 447 (514)
Q Consensus 371 ~~~F~~~~~~~~~d~S~WTeTP~~k~~r~~~~~~~~~~~~~a~~---~~~~~~~~~~~~~e~v~~~n~~~R~~SLle~Hq 447 (514)
+++|+++...+++|+|+||+||++|++|+++.+++....+.... .......+.++++++|++||+++|++|||++||
T Consensus 18 ~R~F~~~~~~~~~d~S~WTeTP~ek~~Rl~~~~~g~~~~~~~~~~~~~~~~~~~~~~e~~~~v~~yn~k~R~~SL~e~Hq 97 (152)
T PF12572_consen 18 NRKFSKGTKSARGDRSSWTETPEEKAKRLADEVLGRSSRASASADEAEAEKRSKRDKEMAEQVKEYNEKKRGESLLEMHQ 97 (152)
T ss_pred CCccccCCCCCCCCccccccCHHHHHHhhhhcccccccccccccccchhhhhhhccHHHHHHHHHHHHHhcchhHHHHHH
Confidence 69999998777789999999999999999999988765443221 122233456678889999999999999999999
Q ss_pred HHhhhhhhhhcCCCCccccccCCCCCCCCchhhhcccCCC-CccccH--HHHhcccCCCCCC
Q 010253 448 EEGKTRAKKKSKQQPEKEEWVGEHPWKPWDREKDLVAGRQ-NIKFDS--ENMAEGLSSRFSS 506 (514)
Q Consensus 448 ~k~k~~~~~~~~~~~~k~~~~~~~~~rpFDRekDl~~~~~-~~~~~~--~~~a~~l~sRFs~ 506 (514)
+++++++++ +++++++++|||||||+||.++++ +.+++. |++|++|||||+|
T Consensus 98 ~k~k~~~~~-------~~~~~~~~~rR~FDRekDm~~~~~~~~~qr~~li~ka~~l~sRFs~ 152 (152)
T PF12572_consen 98 KKRKKKKKE-------KEEEEDDPSRRPFDREKDMAVGGRIDNAQRKELIKKAKDLGSRFSS 152 (152)
T ss_pred HHHHhhccc-------ccccCCCCCCCCCChhhhccccccCCHHHHHHHHHHHHhccccccC
Confidence 999887643 135678889999999999999999 666655 7999999999996
No 4
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.83 E-value=4.8e-21 Score=199.21 Aligned_cols=72 Identities=36% Similarity=0.557 Sum_probs=69.2
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCC-ChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhHHH
Q 010253 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEE 274 (514)
Q Consensus 203 ~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~-~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~~ 274 (514)
.+|||+||||+++||.+|||+|||+||++||||+|+ ++.|+++|+.|++||+|||||++|+.||++|.....
T Consensus 3 ~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~ 75 (371)
T COG0484 3 KRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFK 75 (371)
T ss_pred ccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccc
Confidence 489999999999999999999999999999999999 889999999999999999999999999999987765
No 5
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=9.4e-21 Score=193.05 Aligned_cols=92 Identities=35% Similarity=0.498 Sum_probs=76.4
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCC-ChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhHHHHHhHHHH
Q 010253 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEEQEKFKVE 281 (514)
Q Consensus 203 ~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~-~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~~~~~~~~e 281 (514)
.+|||+||||+++|+..+||+|||||||+||||||+ +|.|.+.|+.|+.||+|||||++|+.||.+|........ ..
T Consensus 15 ~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~--~~ 92 (336)
T KOG0713|consen 15 GRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDEN--KD 92 (336)
T ss_pred CCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhcccc--cc
Confidence 499999999999999999999999999999999999 689999999999999999999999999999966554322 11
Q ss_pred Hhhhhh-hhhhhhhcC
Q 010253 282 LKAMQE-GAQWRKSQG 296 (514)
Q Consensus 282 ~~~~~~-~~~wr~~fg 296 (514)
.....- ..-|..+|+
T Consensus 93 ~~~g~~~~~~f~~~f~ 108 (336)
T KOG0713|consen 93 GEGGGGGNDIFSAFFG 108 (336)
T ss_pred cccCCcccchHHHhhc
Confidence 111111 366777765
No 6
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.72 E-value=3.8e-18 Score=175.55 Aligned_cols=69 Identities=39% Similarity=0.595 Sum_probs=65.5
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhHH
Q 010253 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKE 273 (514)
Q Consensus 203 ~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~ 273 (514)
...||+||||.++||..|||+|||+||++||||||++ +.++|+.|+.||+|||||++|..||++|....
T Consensus 3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~--~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~ 71 (337)
T KOG0712|consen 3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD--AGEKFKEISQAYEVLSDPEKREIYDQYGEEGL 71 (337)
T ss_pred ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc--HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhh
Confidence 4789999999999999999999999999999999987 89999999999999999999999999996655
No 7
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.72 E-value=6.7e-18 Score=177.45 Aligned_cols=68 Identities=32% Similarity=0.466 Sum_probs=65.1
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCC-ChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhh
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 271 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~-~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~ 271 (514)
.|||+||||+++||.++||+|||+||++||||+|+ ++.|+++|+.|++||+||+||.+|+.||++|..
T Consensus 3 ~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~ 71 (369)
T PRK14288 3 LSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKK 71 (369)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhccc
Confidence 79999999999999999999999999999999998 567999999999999999999999999999864
No 8
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.71 E-value=8e-18 Score=177.07 Aligned_cols=69 Identities=32% Similarity=0.486 Sum_probs=66.2
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhh
Q 010253 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 271 (514)
Q Consensus 203 ~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~ 271 (514)
..|||+||||+++|+.++||+|||+||++||||+|+++.|+++|+.|++||+|||||.+|+.||++|..
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~ 71 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHA 71 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCHHHhhhhhhccch
Confidence 379999999999999999999999999999999999888999999999999999999999999999864
No 9
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.67 E-value=5.6e-17 Score=171.74 Aligned_cols=67 Identities=40% Similarity=0.606 Sum_probs=64.4
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCC-ChhHHHHHHHHHHHHHHcCChhHHHHHHHhhh
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~-~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (514)
.|||+||||+++|+.++||+|||+||++||||+|+ .+.|.++|+.|++||+|||||++|+.||+++.
T Consensus 9 ~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~ 76 (392)
T PRK14279 9 KDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRR 76 (392)
T ss_pred cCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhh
Confidence 79999999999999999999999999999999998 56799999999999999999999999999985
No 10
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.67 E-value=9.1e-17 Score=163.60 Aligned_cols=74 Identities=36% Similarity=0.552 Sum_probs=69.4
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCC-ChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhHHHHH
Q 010253 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEEQE 276 (514)
Q Consensus 203 ~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~-~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~~~~ 276 (514)
..|||.||||+.+++..+|++|||+.+|+||||||| +|.|.+.|+.|.+||+||+|+..|..||.++.......
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~~ 78 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSAQ 78 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccch
Confidence 489999999999999999999999999999999999 78999999999999999999999999999997665443
No 11
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.66 E-value=8.8e-17 Score=169.20 Aligned_cols=70 Identities=33% Similarity=0.546 Sum_probs=65.8
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCC-ChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhH
Q 010253 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (514)
Q Consensus 203 ~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~-~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (514)
..|||+||||+++|+.++||+|||+||++||||+|+ ++.|.++|+.|++||+||+||.+|+.||+++...
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g 73 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAG 73 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchh
Confidence 379999999999999999999999999999999998 4678999999999999999999999999998653
No 12
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.66 E-value=6.4e-17 Score=172.58 Aligned_cols=67 Identities=34% Similarity=0.542 Sum_probs=62.6
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhH
Q 010253 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (514)
Q Consensus 203 ~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (514)
..|||+||||+++||.++||+|||+||++||||+|++ .++|+.|++||+||+||.+|+.||.++...
T Consensus 27 ~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~---~e~F~~i~~AYevLsD~~kR~~YD~~G~~~ 93 (421)
T PTZ00037 27 NEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD---PEKFKEISRAYEVLSDPEKRKIYDEYGEEG 93 (421)
T ss_pred chhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch---HHHHHHHHHHHHHhccHHHHHHHhhhcchh
Confidence 4799999999999999999999999999999999863 589999999999999999999999998643
No 13
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.66 E-value=1.1e-16 Score=168.28 Aligned_cols=70 Identities=31% Similarity=0.518 Sum_probs=66.3
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhH
Q 010253 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (514)
Q Consensus 203 ~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (514)
..|||+||||+++|+.++||+|||+||++||||+|+.+.|+++|+.|++||++|+||.+|+.||++|...
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~ 72 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTD 72 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcc
Confidence 3799999999999999999999999999999999988889999999999999999999999999998643
No 14
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.65 E-value=1.7e-16 Score=167.38 Aligned_cols=69 Identities=32% Similarity=0.462 Sum_probs=66.2
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhh
Q 010253 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 271 (514)
Q Consensus 203 ~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~ 271 (514)
..|||+||||+++|+.++||+|||+||++||||+|+++.|+++|+.|++||++|+||.+|+.||+++..
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~ 72 (378)
T PRK14283 4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHA 72 (378)
T ss_pred cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhchhHHHHHHhhhccc
Confidence 479999999999999999999999999999999998888999999999999999999999999999864
No 15
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.65 E-value=1.5e-16 Score=167.85 Aligned_cols=70 Identities=34% Similarity=0.517 Sum_probs=66.5
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhH
Q 010253 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (514)
Q Consensus 203 ~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (514)
..|||+||||+++|+.++||+|||+||++||||+|+++.|+++|+.|++||+||+||.+|+.||+++...
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~ 72 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAG 72 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCcc
Confidence 3799999999999999999999999999999999998889999999999999999999999999998643
No 16
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.65 E-value=1.9e-16 Score=161.60 Aligned_cols=68 Identities=35% Similarity=0.524 Sum_probs=65.8
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhh
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 271 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~ 271 (514)
.|||+||||+++||.++||+|||+||++||||+|+++.++++|+.|++||++|+||.+|+.||.++..
T Consensus 4 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~ 71 (291)
T PRK14299 4 KDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTT 71 (291)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCc
Confidence 79999999999999999999999999999999999888999999999999999999999999999865
No 17
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.64 E-value=2e-16 Score=166.85 Aligned_cols=68 Identities=35% Similarity=0.560 Sum_probs=65.6
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhh
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 271 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~ 271 (514)
.|||+||||+++|+.++||+|||+||++||||+|+.+.++++|+.|++||+||+||.+|+.||++|..
T Consensus 5 ~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~ 72 (377)
T PRK14298 5 RDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHA 72 (377)
T ss_pred CCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCChhHHHHHHHHHHHHHHhcchHhhhhhhhcCcc
Confidence 79999999999999999999999999999999998888999999999999999999999999999864
No 18
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.64 E-value=2.3e-16 Score=166.58 Aligned_cols=69 Identities=36% Similarity=0.584 Sum_probs=66.1
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhH
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (514)
.|||+||||+++|+.++||+|||+||++||||+|+.+.+.++|+.|++||+||+||.+|+.||.++...
T Consensus 3 ~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~ 71 (382)
T PRK14291 3 KDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAA 71 (382)
T ss_pred CCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccc
Confidence 799999999999999999999999999999999998889999999999999999999999999998643
No 19
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.64 E-value=2.2e-16 Score=166.51 Aligned_cols=68 Identities=34% Similarity=0.537 Sum_probs=65.4
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhh
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 271 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~ 271 (514)
.|||+||||+++|+.++||+|||+||++||||+|+++.|+++|+.|++||+||+||.+|+.||.++..
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~ 70 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDP 70 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHHHhchhhhhhhhhccCCc
Confidence 69999999999999999999999999999999999888999999999999999999999999998863
No 20
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.63 E-value=3.1e-16 Score=124.35 Aligned_cols=62 Identities=40% Similarity=0.717 Sum_probs=59.6
Q ss_pred CccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChh--HHHHHHHHHHHHHHcCChhHHHHHH
Q 010253 205 CPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQ--AHQAFIKLNKAFKELQDPEKRKALD 266 (514)
Q Consensus 205 d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~--A~e~F~~I~~AY~vLsDp~kR~~YD 266 (514)
|||+||||+++++.++|+++|+++++.+|||+++... +.+.|..|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 6899999999999999999999999999999998755 8999999999999999999999998
No 21
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.63 E-value=3e-16 Score=165.42 Aligned_cols=69 Identities=32% Similarity=0.443 Sum_probs=66.2
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhH
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (514)
.|||+||||+++|+.++||+|||+|+++||||+|+.+.|+++|+.|++||+||+||.+|+.||.+|...
T Consensus 4 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~ 72 (376)
T PRK14280 4 RDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAG 72 (376)
T ss_pred CChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccHhHHHHHHhcCccc
Confidence 799999999999999999999999999999999998889999999999999999999999999998643
No 22
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.63 E-value=3.6e-16 Score=164.41 Aligned_cols=70 Identities=31% Similarity=0.523 Sum_probs=65.2
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCC--hhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhH
Q 010253 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH--PQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (514)
Q Consensus 203 ~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~--~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (514)
..|||+||||+++|+.++||+|||+|+++||||+|+. ..|+++|+.|++||+||+||.+|+.||.++...
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~ 74 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVG 74 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccc
Confidence 3799999999999999999999999999999999974 568999999999999999999999999998643
No 23
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.62 E-value=3.7e-16 Score=164.12 Aligned_cols=69 Identities=29% Similarity=0.440 Sum_probs=65.2
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCC-ChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhH
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~-~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (514)
.|||+||||+++|+.++||+|||+|+++||||+|+ .+.|.++|+.|++||+||+||.+|..||.++...
T Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~ 72 (365)
T PRK14285 3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTA 72 (365)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcch
Confidence 79999999999999999999999999999999998 4678899999999999999999999999998653
No 24
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.62 E-value=4.6e-16 Score=164.47 Aligned_cols=69 Identities=35% Similarity=0.571 Sum_probs=65.3
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCC-ChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhH
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~-~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (514)
.|||+||||+++|+.++||+|||+||++||||+|+ .+.|+++|+.|++||+||+||.+|..||.+|...
T Consensus 5 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~ 74 (386)
T PRK14277 5 KDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAA 74 (386)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhcccc
Confidence 79999999999999999999999999999999998 4678999999999999999999999999998643
No 25
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.62 E-value=5.4e-16 Score=162.86 Aligned_cols=70 Identities=33% Similarity=0.535 Sum_probs=65.8
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCC-ChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhH
Q 010253 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (514)
Q Consensus 203 ~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~-~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (514)
..|||+||||+++|+.++||+|||+||++||||+|+ .+.+.++|+.|++||+||+||.+|+.||++|...
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g 73 (366)
T PRK14294 3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEG 73 (366)
T ss_pred CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhcccc
Confidence 479999999999999999999999999999999998 4678999999999999999999999999998643
No 26
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.61 E-value=5.4e-16 Score=154.22 Aligned_cols=72 Identities=39% Similarity=0.550 Sum_probs=67.7
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCC-hhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhHHH
Q 010253 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH-PQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEE 274 (514)
Q Consensus 203 ~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~-~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~~ 274 (514)
..|+|+||||+++|+.++|||+||+|+++||||++++ |.+.++|+.|+.||.||+||.+|..||.+|.....
T Consensus 30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l~ 102 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGLK 102 (279)
T ss_pred hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHHH
Confidence 3789999999999999999999999999999999996 88999999999999999999999999999876543
No 27
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.60 E-value=8.9e-16 Score=162.59 Aligned_cols=68 Identities=35% Similarity=0.540 Sum_probs=64.5
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCC-ChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhh
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 271 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~-~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~ 271 (514)
.|||+||||+++|+.++||+|||+||++||||+|+ .+.|+++|+.|++||+||+||.+|+.||+++..
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~ 69 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKD 69 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhcccc
Confidence 48999999999999999999999999999999998 467899999999999999999999999999864
No 28
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.60 E-value=6.9e-16 Score=162.83 Aligned_cols=69 Identities=32% Similarity=0.537 Sum_probs=65.3
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCC-ChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhH
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~-~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (514)
.|||+||||+++|+.++||+|||+||++||||+|+ .+.|+++|+.|++||+||+||.+|+.||+++...
T Consensus 4 ~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~ 73 (380)
T PRK14297 4 KDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTAD 73 (380)
T ss_pred CChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCccc
Confidence 79999999999999999999999999999999998 4678999999999999999999999999998653
No 29
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.60 E-value=9.8e-16 Score=162.17 Aligned_cols=67 Identities=33% Similarity=0.482 Sum_probs=63.5
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCC-ChhHHHHHHHHHHHHHHcCChhHHHHHHH----hhh
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDE----KIK 270 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~-~~~A~e~F~~I~~AY~vLsDp~kR~~YD~----~~~ 270 (514)
.|||+||||+++|+.++||+|||+||++||||+|+ .+.|+++|+.|++||+||+||.+|+.||+ ++.
T Consensus 9 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~ 80 (389)
T PRK14295 9 KDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGN 80 (389)
T ss_pred cCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcc
Confidence 69999999999999999999999999999999998 45789999999999999999999999998 664
No 30
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.60 E-value=7.1e-16 Score=162.12 Aligned_cols=69 Identities=36% Similarity=0.638 Sum_probs=64.8
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCC--hhHHHHHHHHHHHHHHcCChhHHHHHHHhhhh
Q 010253 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH--PQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 271 (514)
Q Consensus 203 ~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~--~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~ 271 (514)
.++||+||||..+|+..+||++||+|||+||||||+. ..|++.|+.|+.||+|||||+.|+.||.+...
T Consensus 7 ~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreq 77 (508)
T KOG0717|consen 7 KRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQ 77 (508)
T ss_pred hhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHH
Confidence 3789999999999999999999999999999999985 57899999999999999999999999998763
No 31
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.60 E-value=8.8e-16 Score=161.73 Aligned_cols=68 Identities=38% Similarity=0.603 Sum_probs=64.6
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCC-ChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhh
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 271 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~-~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~ 271 (514)
.|||+||||+++|+.++||+|||+||++||||+|+ .+.|+++|+.|++||+||+||.+|+.||.++..
T Consensus 4 ~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~ 72 (373)
T PRK14301 4 RDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHA 72 (373)
T ss_pred CChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhcccc
Confidence 79999999999999999999999999999999998 467889999999999999999999999999864
No 32
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.59 E-value=1.6e-15 Score=159.46 Aligned_cols=70 Identities=36% Similarity=0.600 Sum_probs=65.4
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCC-ChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhH
Q 010253 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (514)
Q Consensus 203 ~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~-~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (514)
..|||+||||+++|+.++||+|||+||++||||+|+ .+.|.++|+.|++||++|+||.+|..||.++...
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 73 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAA 73 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccc
Confidence 379999999999999999999999999999999998 4678899999999999999999999999988643
No 33
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.59 E-value=1e-15 Score=161.08 Aligned_cols=72 Identities=31% Similarity=0.496 Sum_probs=67.2
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCCh----hHHHHHHHHHHHHHHcCChhHHHHHHHhhhhHHH
Q 010253 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHP----QAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEE 274 (514)
Q Consensus 203 ~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~----~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~~ 274 (514)
..|||.+|||+++||.+||++|||++++.|||||+.++ .|++.|+.|..||+|||||++|..||.+|..+..
T Consensus 8 e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~ 83 (546)
T KOG0718|consen 8 EIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK 83 (546)
T ss_pred hhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence 36899999999999999999999999999999999854 4899999999999999999999999999987665
No 34
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.58 E-value=1.6e-15 Score=160.97 Aligned_cols=69 Identities=33% Similarity=0.549 Sum_probs=65.1
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCC-hhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhH
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH-PQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~-~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (514)
.|||+||||+++|+..+||+|||+|+++||||+++. +.|+++|+.|++||++|+||.+|+.||.++...
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~ 72 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAG 72 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchh
Confidence 699999999999999999999999999999999984 678899999999999999999999999998653
No 35
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.57 E-value=2.6e-15 Score=154.14 Aligned_cols=67 Identities=25% Similarity=0.441 Sum_probs=64.7
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCChhHHHHHHHhhh
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (514)
.|||+||||+++++.++||+|||+|+++||||+|+.+.+.++|+.|++||++|+||.+|+.||.++.
T Consensus 4 ~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~ 70 (306)
T PRK10266 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQ 70 (306)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHhhc
Confidence 7999999999999999999999999999999999888899999999999999999999999999874
No 36
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.57 E-value=2.2e-15 Score=157.45 Aligned_cols=68 Identities=35% Similarity=0.557 Sum_probs=64.7
Q ss_pred CccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhH
Q 010253 205 CPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (514)
Q Consensus 205 d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (514)
|||+||||+++|+.++||+|||+||++||||+++.+.+.++|+.|++||++|+|+.+|..||.++...
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~ 68 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAG 68 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhhChHHHHhhhhccccc
Confidence 79999999999999999999999999999999987778999999999999999999999999988653
No 37
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.57 E-value=2.2e-15 Score=158.66 Aligned_cols=69 Identities=30% Similarity=0.452 Sum_probs=65.6
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhH
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (514)
.|||+||||+++|+.++||+|||+|+++||||+++.+.++++|+.|++||++|+|+.+|+.||.++...
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~ 71 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDA 71 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhhhHhHhhHHHhccccc
Confidence 699999999999999999999999999999999987778999999999999999999999999998643
No 38
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.57 E-value=2.5e-15 Score=169.57 Aligned_cols=72 Identities=26% Similarity=0.355 Sum_probs=67.8
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhHH
Q 010253 202 EGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKE 273 (514)
Q Consensus 202 ~~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~ 273 (514)
...+||+||||+++|+..+||+|||+||++||||+++.+.|..+|+.|++||+|||||.+|+.||.+|..+.
T Consensus 571 ~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl 642 (1136)
T PTZ00341 571 PDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGYDGI 642 (1136)
T ss_pred CCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHhhcccccc
Confidence 458999999999999999999999999999999999977889999999999999999999999999997653
No 39
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.56 E-value=3.1e-15 Score=157.30 Aligned_cols=68 Identities=34% Similarity=0.489 Sum_probs=65.5
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhh
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 271 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~ 271 (514)
.|||+||||+++|+.++||+|||+|+++||||+++.+.+.++|+.|++||++|+||.+|+.||.+|..
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~ 69 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTA 69 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCc
Confidence 59999999999999999999999999999999999888999999999999999999999999999864
No 40
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.56 E-value=3.6e-15 Score=157.13 Aligned_cols=68 Identities=28% Similarity=0.529 Sum_probs=65.5
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhh
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 271 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~ 271 (514)
.|||+||||+++|+..+||+|||+|+++||||+|+.+.+.++|+.|++||+||+||.+|+.||.++..
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~ 70 (374)
T PRK14293 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEA 70 (374)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHHHHhchHHHHHHhhcccc
Confidence 69999999999999999999999999999999999888999999999999999999999999998864
No 41
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.56 E-value=4.1e-15 Score=151.66 Aligned_cols=69 Identities=29% Similarity=0.416 Sum_probs=66.5
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhH
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (514)
.|||+||||+++|+..|||+||++||++||||.|...+|.++|+.|.+||+||+|+++|..||..+...
T Consensus 43 ~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~ 111 (288)
T KOG0715|consen 43 EDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDEEKRQEYDVYGLEQ 111 (288)
T ss_pred cchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhc
Confidence 499999999999999999999999999999999999999999999999999999999999999998654
No 42
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=5.2e-15 Score=156.45 Aligned_cols=69 Identities=32% Similarity=0.527 Sum_probs=65.2
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCC-ChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhh
Q 010253 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 271 (514)
Q Consensus 203 ~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~-~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~ 271 (514)
..|||+||||+++|+.++||+|||+||++||||+|+ .+.|.++|+.|++||++|+||.+|+.||.++..
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~ 73 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHA 73 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhccc
Confidence 379999999999999999999999999999999998 457999999999999999999999999999864
No 43
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=4.5e-15 Score=155.89 Aligned_cols=68 Identities=32% Similarity=0.573 Sum_probs=64.3
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCCh--hHHHHHHHHHHHHHHcCChhHHHHHHHhhhh
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHP--QAHQAFIKLNKAFKELQDPEKRKALDEKIKL 271 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~--~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~ 271 (514)
.|||+||||+++|+..+||+|||+|+++||||+++.. .|.++|+.|++||++|+|+.+|..||.++..
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~ 72 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTV 72 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCc
Confidence 6999999999999999999999999999999999843 6899999999999999999999999999864
No 44
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.51 E-value=2.4e-14 Score=111.63 Aligned_cols=57 Identities=40% Similarity=0.705 Sum_probs=54.1
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCC--ChhHHHHHHHHHHHHHHcCChh
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP--HPQAHQAFIKLNKAFKELQDPE 260 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~--~~~A~e~F~~I~~AY~vLsDp~ 260 (514)
.|||+||||+++++.++||++|+++++.+|||+++ .+.+.+.|+.|++||++|+||.
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCC
Confidence 48999999999999999999999999999999998 5789999999999999999985
No 45
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.48 E-value=6e-14 Score=107.41 Aligned_cols=54 Identities=44% Similarity=0.736 Sum_probs=51.9
Q ss_pred CccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCC-hhHHHHHHHHHHHHHHcCC
Q 010253 205 CPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH-PQAHQAFIKLNKAFKELQD 258 (514)
Q Consensus 205 d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~-~~A~e~F~~I~~AY~vLsD 258 (514)
|||+||||+++++.++||++|++|++++|||++.. ..+.+.|+.|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 69999999999999999999999999999999987 7789999999999999986
No 46
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.44 E-value=1.7e-13 Score=144.48 Aligned_cols=81 Identities=35% Similarity=0.514 Sum_probs=72.6
Q ss_pred HHHHHHHhccCCCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhh
Q 010253 192 FEEVTRIMGVEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 271 (514)
Q Consensus 192 ~~~v~ri~~~~~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~ 271 (514)
..++.+.+. ..|+|.||||+.+++.++|||.||++|..+|||||..+.|+++|+.|+.||++|+|+.+|..||.....
T Consensus 225 adrl~re~~--~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~~k 302 (490)
T KOG0720|consen 225 ADRLSRELN--ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIPRAEEAFKKLQVAFEVIGDSVKRKEYDLELKK 302 (490)
T ss_pred HHhhhhhhc--CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCChhHHHHHHHHHHHHHHhcchhhhhHHHHHHHH
Confidence 344445544 499999999999999999999999999999999999999999999999999999999999999998865
Q ss_pred HHH
Q 010253 272 KEE 274 (514)
Q Consensus 272 ~~~ 274 (514)
...
T Consensus 303 ene 305 (490)
T KOG0720|consen 303 ENE 305 (490)
T ss_pred HHH
Confidence 544
No 47
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.44 E-value=1.1e-13 Score=153.48 Aligned_cols=69 Identities=30% Similarity=0.465 Sum_probs=65.7
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhH
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 272 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~ 272 (514)
.|||+||||+++|+..+||++||+|+++||||+++.+.+..+|+.|++||++|+||.+|+.||.++...
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG 70 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANYDKYGHDG 70 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccc
Confidence 699999999999999999999999999999999988888999999999999999999999999988644
No 48
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.44 E-value=1.5e-13 Score=129.43 Aligned_cols=67 Identities=39% Similarity=0.567 Sum_probs=63.3
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChh--HHHHHHHHHHHHHHcCChhHHHHHHHhh
Q 010253 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQ--AHQAFIKLNKAFKELQDPEKRKALDEKI 269 (514)
Q Consensus 203 ~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~--A~e~F~~I~~AY~vLsDp~kR~~YD~~~ 269 (514)
..+||+||||.++|+..+|+++|++++++||||+|+... +.+.|+.|++||.+|+|+.+|..||..+
T Consensus 5 ~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~ 73 (237)
T COG2214 5 LLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIG 73 (237)
T ss_pred hhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhc
Confidence 479999999999999999999999999999999999543 8999999999999999999999999974
No 49
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.43 E-value=1.7e-13 Score=132.74 Aligned_cols=71 Identities=30% Similarity=0.475 Sum_probs=66.6
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCC-hhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhHH
Q 010253 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH-PQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKE 273 (514)
Q Consensus 203 ~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~-~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~ 273 (514)
..|+|+||||+++++..|||+|||+|+++|||||++. .+.++.|..|++||+.|+|+..|..|..+|+.+.
T Consensus 98 ~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PDG 169 (230)
T KOG0721|consen 98 KFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNPDG 169 (230)
T ss_pred cCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCCCC
Confidence 4799999999999999999999999999999999997 5677889999999999999999999999998765
No 50
>PHA03102 Small T antigen; Reviewed
Probab=99.37 E-value=3.4e-13 Score=125.72 Aligned_cols=67 Identities=19% Similarity=0.256 Sum_probs=61.4
Q ss_pred CCccccccCCCCC--CHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhHH
Q 010253 204 DCPYDVIGANHNM--SAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKE 273 (514)
Q Consensus 204 ~d~Y~VLGV~~~A--s~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~ 273 (514)
..+|+||||+++| |..+||+|||++++++||||++ ..++|+.|++||++|+|+.+|..||.++....
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg---~~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~ 73 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGG---DEEKMKELNTLYKKFRESVKSLRDLDGEEDSS 73 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCc---hhHHHHHHHHHHHHHhhHHHhccccccCCccc
Confidence 4579999999999 9999999999999999999974 45799999999999999999999999986543
No 51
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.27 E-value=7.7e-12 Score=118.81 Aligned_cols=67 Identities=24% Similarity=0.348 Sum_probs=59.0
Q ss_pred CCccccccCCCC--CCHHHHHHHHHHHHHhhCCCCCCCh------hHHHHHHHHHHHHHHcCChhHHHHHHHhhh
Q 010253 204 DCPYDVIGANHN--MSAENIKKRYWKLSLFVHPDKCPHP------QAHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (514)
Q Consensus 204 ~d~Y~VLGV~~~--As~~eIKkAYrkLal~~HPDK~~~~------~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (514)
.|||+||||++. ++..+|+++|+++++++|||++... .+.+.|..|++||++|+||.+|+.|+....
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~l~ 75 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLSLH 75 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHHhc
Confidence 489999999996 7889999999999999999997632 256789999999999999999999996543
No 52
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.26 E-value=1.1e-11 Score=117.28 Aligned_cols=67 Identities=22% Similarity=0.374 Sum_probs=58.9
Q ss_pred CCccccccCCCC--CCHHHHHHHHHHHHHhhCCCCCCChh----HHHHHHHHHHHHHHcCChhHHHHHHHhhh
Q 010253 204 DCPYDVIGANHN--MSAENIKKRYWKLSLFVHPDKCPHPQ----AHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (514)
Q Consensus 204 ~d~Y~VLGV~~~--As~~eIKkAYrkLal~~HPDK~~~~~----A~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (514)
.|||+||||++. ++..+|+++|++++++||||++.... +...|..|++||++|+||.+|+.|+....
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l~ 74 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLLLQ 74 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHcc
Confidence 689999999996 78999999999999999999987432 34568899999999999999999987653
No 53
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.23 E-value=5.5e-12 Score=124.71 Aligned_cols=74 Identities=27% Similarity=0.484 Sum_probs=69.2
Q ss_pred ccCCCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhHH
Q 010253 200 GVEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKE 273 (514)
Q Consensus 200 ~~~~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~ 273 (514)
-|+..|.|+||||+++++..+|.+|||+||++||||+++++.+.+.|..|..||++|.|.+.|..||-.....+
T Consensus 29 YCG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~e~k~~F~~iAtayeilkd~e~rt~ydyaldhpd 102 (329)
T KOG0722|consen 29 YCGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDPESKKLFVKIATAYEILKDNETRTQYDYALDHPD 102 (329)
T ss_pred cccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCchhhhhhhhhhcccccccchhhHHhHHHHhcCch
Confidence 46779999999999999999999999999999999999999999999999999999999999999998876543
No 54
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.22 E-value=2.7e-11 Score=115.38 Aligned_cols=69 Identities=22% Similarity=0.427 Sum_probs=61.0
Q ss_pred CCCCccccccCCCC--CCHHHHHHHHHHHHHhhCCCCCCCh------hHHHHHHHHHHHHHHcCChhHHHHHHHhhh
Q 010253 202 EGDCPYDVIGANHN--MSAENIKKRYWKLSLFVHPDKCPHP------QAHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (514)
Q Consensus 202 ~~~d~Y~VLGV~~~--As~~eIKkAYrkLal~~HPDK~~~~------~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (514)
+..|||++|||++. .+..+|+++|++|+++||||++... .+...|..|++||.+|+||.+|+.|+....
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l~ 78 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLALS 78 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 35899999999997 6789999999999999999998642 256789999999999999999999997654
No 55
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.19 E-value=2.3e-11 Score=125.19 Aligned_cols=81 Identities=31% Similarity=0.462 Sum_probs=70.5
Q ss_pred HHHHHHHHhc-cCCCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCCh----hHHHHHHHHHHHHHHcCChhHHHHH
Q 010253 191 RFEEVTRIMG-VEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHP----QAHQAFIKLNKAFKELQDPEKRKAL 265 (514)
Q Consensus 191 ~~~~v~ri~~-~~~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~----~A~e~F~~I~~AY~vLsDp~kR~~Y 265 (514)
-.+.+.|+.. ...+|||+||||.++|+..||.||||++|.+||||...+. .|+.+|.-|..|-+||+||++|+.|
T Consensus 380 Gle~Akrlkkqs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqF 459 (504)
T KOG0624|consen 380 GLERAKRLKKQSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQF 459 (504)
T ss_pred HHHHHHHHHHHhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhc
Confidence 3455556553 3468999999999999999999999999999999998864 4899999999999999999999999
Q ss_pred HHhhhh
Q 010253 266 DEKIKL 271 (514)
Q Consensus 266 D~~~~~ 271 (514)
|+.-..
T Consensus 460 DnGeDP 465 (504)
T KOG0624|consen 460 DNGEDP 465 (504)
T ss_pred cCCCCC
Confidence 987654
No 56
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.18 E-value=4.3e-11 Score=114.30 Aligned_cols=67 Identities=24% Similarity=0.375 Sum_probs=58.3
Q ss_pred CCCccccccCCCC--CCHHHHHHHHHHHHHhhCCCCCCC-hh-----HHHHHHHHHHHHHHcCChhHHHHHHHhh
Q 010253 203 GDCPYDVIGANHN--MSAENIKKRYWKLSLFVHPDKCPH-PQ-----AHQAFIKLNKAFKELQDPEKRKALDEKI 269 (514)
Q Consensus 203 ~~d~Y~VLGV~~~--As~~eIKkAYrkLal~~HPDK~~~-~~-----A~e~F~~I~~AY~vLsDp~kR~~YD~~~ 269 (514)
..|||+||||++. ++..+|+++|++|+++||||++.. +. +.+.+..|++||++|+||.+|+.|+...
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~l 79 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLHL 79 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHh
Confidence 3799999999985 688999999999999999999873 22 3455799999999999999999999754
No 57
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=99.16 E-value=6.6e-11 Score=117.98 Aligned_cols=196 Identities=20% Similarity=0.175 Sum_probs=116.8
Q ss_pred HHhccCCCCccccccCCC---CCCHHHHHHHHHHHHHhhCCCCCC---ChhHHHHHHHHHHHHHHcCChhHHHHHHHhhh
Q 010253 197 RIMGVEGDCPYDVIGANH---NMSAENIKKRYWKLSLFVHPDKCP---HPQAHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (514)
Q Consensus 197 ri~~~~~~d~Y~VLGV~~---~As~~eIKkAYrkLal~~HPDK~~---~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (514)
....+...|+|.+|||+. .+++.+|.++.++..++||||+.. +.+..+.|++|+.||+||+|+.+|..||....
T Consensus 36 d~k~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~df 115 (379)
T COG5269 36 DFKNWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSNDF 115 (379)
T ss_pred hhhhhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhcccccc
Confidence 444567789999999986 588999999999999999999974 34678999999999999999999999998754
Q ss_pred hHHHH--------HhHHHHHhhhhhhhhhhhhcCCCCCCchhH-hhhhccCCCccccccc------cC------Cc---h
Q 010253 271 LKEEQ--------EKFKVELKAMQEGAQWRKSQGILMEGDDEL-LADMEVKAPPKRDEWM------TT------LP---P 326 (514)
Q Consensus 271 ~~~~~--------~~~~~e~~~~~~~~~wr~~fgv~~~~d~e~-~~g~~~~~e~~re~WM------t~------Lp---e 326 (514)
..... +-|..+...+.....|+.-+.|+..+..+. ++ ..+.+.+.|. +. .| +
T Consensus 116 ~advppp~~~t~~~Ffe~w~pvFe~earFSkKqPvPsLg~~dss~k----eVe~FY~FW~nFdSWRtFE~lded~pdd~e 191 (379)
T COG5269 116 DADVPPPRIYTPDEFFEVWEPVFEREARFSKKQPVPSLGPSDSSLK----EVEEFYEFWSNFDSWRTFEPLDEDYPDDME 191 (379)
T ss_pred ccCCCCccCCCchhHHHHHHHHHHhhhhccccCCCCCCCCchhHHH----HHHHHHHHHHhccccccccchhhhcCcchh
Confidence 33221 123333444555556666666554443322 21 2233444442 21 22 2
Q ss_pred hhhhhhhcccccHHHHHhhccCCchhHHHHHhhhcCCCCCCCccccccccCCCCCCCCCCCCCCChHHHHHHHHh
Q 010253 327 ERKVRAFSLSTASQLLFLKVQCPVPLLTVTVSSLQPGGGVPMHSTKTFSRTSKEGRGDTSVWTDTPSDRAQKAKM 401 (514)
Q Consensus 327 E~~~~~Y~~~~dm~~i~~~v~~De~Rf~~iI~~~I~~g~l~~~~~~~F~~~~~~~~~d~S~WTeTP~~k~~r~~~ 401 (514)
++....|+..++-...-..---|--|+..+++.+... =|.- +.|.-..+.. -..+.|+-.-..+.+++..
T Consensus 192 ~rD~kry~e~KNr~~r~k~K~~DnaRl~~LV~~A~~~--DPRI--K~fkEqeK~~-k~~rkWereagar~~a~aa 261 (379)
T COG5269 192 ERDRKRYSEAKNREKRAKLKNQDNARLKRLVQIAKKR--DPRI--KSFKEQEKEM-KKIRKWEREAGARLKALAA 261 (379)
T ss_pred hhhhHHHHHhhhHHHHHhhhchhHHHHHHHHHHHHhc--Ccch--hhHHHHHHHH-HHHhccchhhhhhHHHHHH
Confidence 3334445543322222211112667777777776663 2222 3333222211 1234487766666555433
No 58
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.12 E-value=3.5e-11 Score=118.91 Aligned_cols=67 Identities=40% Similarity=0.635 Sum_probs=63.4
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCCh--hHHHHHHHHHHHHHHcCChhHHHHHHHhhh
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHP--QAHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~--~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (514)
.|||.||||.+.|+..+|++||+++++++|||+|+.+ .+..+|+.|.+||++|+|+.+|..||.++.
T Consensus 3 ~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~ 71 (306)
T KOG0714|consen 3 KDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGE 71 (306)
T ss_pred ccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCc
Confidence 7999999999999999999999999999999998876 566689999999999999999999999997
No 59
>PHA02624 large T antigen; Provisional
Probab=99.11 E-value=5.1e-11 Score=131.18 Aligned_cols=93 Identities=17% Similarity=0.134 Sum_probs=72.9
Q ss_pred CCccccccCCCCC--CHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCChhHHHHH--HHhhhhHHHHHhHH
Q 010253 204 DCPYDVIGANHNM--SAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKAL--DEKIKLKEEQEKFK 279 (514)
Q Consensus 204 ~d~Y~VLGV~~~A--s~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsDp~kR~~Y--D~~~~~~~~~~~~~ 279 (514)
.++|+||||+++| +..+||+|||+++++||||+.. +.++|+.|+.||++|+|+.+|..| |..... +..
T Consensus 11 ~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgG---deekfk~Ln~AYevL~d~~k~~r~~fd~~~~~-----~v~ 82 (647)
T PHA02624 11 KELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGG---DEEKMKRLNSLYKKLQEGVKSARQSFGTQDSS-----EIP 82 (647)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC---cHHHHHHHHHHHHHHhcHHHhhhccccccccc-----CCC
Confidence 6899999999999 9999999999999999999963 568999999999999999999999 433100 000
Q ss_pred HHHhhhhhhhhhhhhcC-CCCCCchhHh
Q 010253 280 VELKAMQEGAQWRKSQG-ILMEGDDELL 306 (514)
Q Consensus 280 ~e~~~~~~~~~wr~~fg-v~~~~d~e~~ 306 (514)
......|..+|+.|+. + .+++..+.
T Consensus 83 -~~~~~~w~~ww~~f~~k~-~EDI~c~E 108 (647)
T PHA02624 83 -TYGTPEWEQWWEEFNEKW-DEDLFCDE 108 (647)
T ss_pred -CCccccHHHHHHHhhhhh-hccchhhh
Confidence 1134678899999986 4 34444443
No 60
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.09 E-value=7.7e-11 Score=123.62 Aligned_cols=91 Identities=30% Similarity=0.394 Sum_probs=74.1
Q ss_pred ccCCCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCC--hhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhHHHHHh
Q 010253 200 GVEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH--PQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEEQEK 277 (514)
Q Consensus 200 ~~~~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~--~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~~~~~ 277 (514)
.....|||.||||..+++..+||++|+++++.+|||++.. ..++.+|+.|.+||.+|+||.+|..||......+....
T Consensus 369 kSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg~dle~~~~~ 448 (486)
T KOG0550|consen 369 KSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSGQDLEEVGSG 448 (486)
T ss_pred HhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccccchhhhcCC
Confidence 3456899999999999999999999999999999999984 47899999999999999999999999987655443322
Q ss_pred HHHHHhhhhhhhhhhhh
Q 010253 278 FKVELKAMQEGAQWRKS 294 (514)
Q Consensus 278 ~~~e~~~~~~~~~wr~~ 294 (514)
. ..+++...++.+
T Consensus 449 ~----a~~dp~~~~~a~ 461 (486)
T KOG0550|consen 449 G----AGFDPFNIFRAF 461 (486)
T ss_pred C----cCcChhhhhhhc
Confidence 1 234445555555
No 61
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.04 E-value=4.8e-10 Score=107.68 Aligned_cols=81 Identities=33% Similarity=0.530 Sum_probs=70.0
Q ss_pred HHHHHHHhcc----CCCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCC--hhHHHHHHHHHHHHHHcCChhHHHHH
Q 010253 192 FEEVTRIMGV----EGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH--PQAHQAFIKLNKAFKELQDPEKRKAL 265 (514)
Q Consensus 192 ~~~v~ri~~~----~~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~--~~A~e~F~~I~~AY~vLsDp~kR~~Y 265 (514)
-.+|.||+.. -+.|+|+||.|.+..+.++||+.||+|++.+|||||++ +.|..+|..|.+||.+|-|+..|...
T Consensus 37 ~~qIeRllrpgstyfnLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~ 116 (250)
T KOG1150|consen 37 KQQIERLLRPGSTYFNLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRC 116 (250)
T ss_pred HHHHHHHhcCCccccccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 3566777763 36899999999999999999999999999999999994 57999999999999999999988777
Q ss_pred HHhhhhH
Q 010253 266 DEKIKLK 272 (514)
Q Consensus 266 D~~~~~~ 272 (514)
+.....+
T Consensus 117 ~~~y~~a 123 (250)
T KOG1150|consen 117 LDVYTAA 123 (250)
T ss_pred HHHHHHH
Confidence 6655443
No 62
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=98.97 E-value=4.7e-10 Score=113.61 Aligned_cols=55 Identities=25% Similarity=0.409 Sum_probs=50.5
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCC--------hhHHHHHHHHHHHHHHcCC
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH--------PQAHQAFIKLNKAFKELQD 258 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~--------~~A~e~F~~I~~AY~vLsD 258 (514)
.++|+||||++++|.++||++||+|+++||||++.. +.++++|+.|++||++|+.
T Consensus 200 ~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 200 EDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred HhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 699999999999999999999999999999999742 3488999999999999974
No 63
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=98.96 E-value=5.8e-10 Score=99.60 Aligned_cols=51 Identities=25% Similarity=0.268 Sum_probs=47.4
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcC
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQ 257 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLs 257 (514)
.++|+||||+++++.++|+++||+|++++|||+. +..+.|+.|++||++|.
T Consensus 65 ~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkg---Gs~~~~~kIneAyevL~ 115 (116)
T PTZ00100 65 SEAYKILNISPTASKERIREAHKQLMLRNHPDNG---GSTYIASKVNEAKDLLL 115 (116)
T ss_pred HHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCC---CCHHHHHHHHHHHHHHh
Confidence 6899999999999999999999999999999985 45689999999999985
No 64
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=98.83 E-value=3.4e-09 Score=111.92 Aligned_cols=73 Identities=30% Similarity=0.520 Sum_probs=66.0
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCC------hhHHHHHHHHHHHHHHcCChhHHHHHHHhhhhHHH
Q 010253 202 EGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH------PQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEE 274 (514)
Q Consensus 202 ~~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~------~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~~~~~ 274 (514)
...|+|+||||+.+++..+||++||+|+.++||||.+. ..-++.++.|++||..|+|...|..|-.+|..+..
T Consensus 96 ~~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd~p 174 (610)
T COG5407 96 RGFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPDSP 174 (610)
T ss_pred cCCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCCCC
Confidence 35899999999999999999999999999999999874 24688999999999999999999999999876543
No 65
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=98.81 E-value=7.8e-09 Score=98.59 Aligned_cols=67 Identities=22% Similarity=0.369 Sum_probs=59.5
Q ss_pred CCccccccCCCC--CCHHHHHHHHHHHHHhhCCCCCCChh------HHHHHHHHHHHHHHcCChhHHHHHHHhhh
Q 010253 204 DCPYDVIGANHN--MSAENIKKRYWKLSLFVHPDKCPHPQ------AHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (514)
Q Consensus 204 ~d~Y~VLGV~~~--As~~eIKkAYrkLal~~HPDK~~~~~------A~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (514)
.|||++|||++. .+...|+++|+.|.+++|||+..... +.+....||+||.+|+||-+|+.|=....
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L~ 76 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAIIALN 76 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHhc
Confidence 699999999986 89999999999999999999986432 55678999999999999999999987654
No 66
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=98.70 E-value=2.8e-08 Score=93.37 Aligned_cols=56 Identities=29% Similarity=0.405 Sum_probs=49.1
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCCCCh------hHHHHHHHHHHHHHHcCChhHHHHHHHhhh
Q 010253 215 NMSAENIKKRYWKLSLFVHPDKCPHP------QAHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (514)
Q Consensus 215 ~As~~eIKkAYrkLal~~HPDK~~~~------~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (514)
+.+..+|+++|++++++||||+++.. .+...|..|++||++|+||.+|+.|+....
T Consensus 2 ~iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l~ 63 (157)
T TIGR00714 2 QLDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSLH 63 (157)
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 35778999999999999999997632 267889999999999999999999998765
No 67
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=97.90 E-value=1.4e-05 Score=91.65 Aligned_cols=53 Identities=28% Similarity=0.560 Sum_probs=46.2
Q ss_pred CCCccccccCCCC----CCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcC
Q 010253 203 GDCPYDVIGANHN----MSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQ 257 (514)
Q Consensus 203 ~~d~Y~VLGV~~~----As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLs 257 (514)
..+.|+||.|+-+ ...+.||++|+|||.+||||||| +..++|..|++||+.|+
T Consensus 1280 ~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNP--EGRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1280 VDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNP--EGREMFERVNKAYELLS 1336 (2235)
T ss_pred hHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCc--hHHHHHHHHHHHHHHHH
Confidence 3678999999853 34588999999999999999996 56799999999999998
No 68
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.83 E-value=1.7e-05 Score=78.32 Aligned_cols=55 Identities=24% Similarity=0.508 Sum_probs=51.2
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHH-HcCC
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFK-ELQD 258 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~-vLsD 258 (514)
..+|.||||...|+.++++.+|..|++++|||........+.|++|.+||. ||+.
T Consensus 47 ~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~adaa~f~qideafrkvlq~ 102 (342)
T KOG0568|consen 47 MECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEEADAARFIQIDEAFRKVLQE 102 (342)
T ss_pred HHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCccccHHHHHHHHHHHHHHHHH
Confidence 568999999999999999999999999999999988888899999999998 8874
No 69
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=96.51 E-value=0.004 Score=55.01 Aligned_cols=49 Identities=24% Similarity=0.371 Sum_probs=42.5
Q ss_pred ccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCCh
Q 010253 208 DVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDP 259 (514)
Q Consensus 208 ~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsDp 259 (514)
.||||+++++.+.||.++|++-+..|||+-..| -.--.|++|+++|...
T Consensus 60 lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSP---YlAsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 60 LILGVTPSLDKDKIKEAHRRIMLANHPDRGGSP---YLASKINEAKDLLEGT 108 (112)
T ss_pred HHhCCCccccHHHHHHHHHHHHHcCCCcCCCCH---HHHHHHHHHHHHHhcc
Confidence 489999999999999999999999999998655 4445799999998753
No 70
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=96.22 E-value=0.0056 Score=57.58 Aligned_cols=67 Identities=30% Similarity=0.470 Sum_probs=55.3
Q ss_pred CCccccccCCC--CCCHHHHHHHHHHHHHhhCCCCCCC------hhHHHHHHHHHHHHHHcCChhHHHHHHHhhh
Q 010253 204 DCPYDVIGANH--NMSAENIKKRYWKLSLFVHPDKCPH------PQAHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (514)
Q Consensus 204 ~d~Y~VLGV~~--~As~~eIKkAYrkLal~~HPDK~~~------~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (514)
.+||.++|... ...++-+.--|.-.+.++|||+... ..|.+....|++||.+|.||-+|+.|-....
T Consensus 8 ~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilkl~ 82 (168)
T KOG3192|consen 8 SRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLKLK 82 (168)
T ss_pred HHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 68999997654 4667777778999999999999542 2478889999999999999999999986543
No 71
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=95.51 E-value=0.02 Score=62.58 Aligned_cols=44 Identities=32% Similarity=0.487 Sum_probs=33.0
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCCCChh--------HHHHHHHHHHHHHH
Q 010253 212 ANHNMSAENIKKRYWKLSLFVHPDKCPHPQ--------AHQAFIKLNKAFKE 255 (514)
Q Consensus 212 V~~~As~~eIKkAYrkLal~~HPDK~~~~~--------A~e~F~~I~~AY~v 255 (514)
+.--.+..+|||+|||.+|.+||||.+..+ |++.|..+++||..
T Consensus 396 ltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~ 447 (453)
T KOG0431|consen 396 LTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNK 447 (453)
T ss_pred hhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHh
Confidence 344578999999999999999999988542 44556666665543
No 72
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=94.33 E-value=0.043 Score=52.37 Aligned_cols=53 Identities=25% Similarity=0.452 Sum_probs=46.9
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCC--------hhHHHHHHHHHHHHHHc
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH--------PQAHQAFIKLNKAFKEL 256 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~--------~~A~e~F~~I~~AY~vL 256 (514)
.+.|.+||+...+...+|+++|+++...+|||+... ..+.++++.|+.||+.+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 789999999999999999999999999999999542 24788899999999754
No 73
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=93.44 E-value=0.053 Score=51.77 Aligned_cols=65 Identities=23% Similarity=0.358 Sum_probs=50.5
Q ss_pred ccccccCCCCC--CHHHHHHHHHHHHHhhCCCCCCChh------HHHHHHHHHHHHHHcCChhHHHHHHHhhh
Q 010253 206 PYDVIGANHNM--SAENIKKRYWKLSLFVHPDKCPHPQ------AHQAFIKLNKAFKELQDPEKRKALDEKIK 270 (514)
Q Consensus 206 ~Y~VLGV~~~A--s~~eIKkAYrkLal~~HPDK~~~~~------A~e~F~~I~~AY~vLsDp~kR~~YD~~~~ 270 (514)
++..+|....+ ..+.++..|+.+.+.||||+....+ +-..+..++.||.+|.+|-+|..|=....
T Consensus 3 ~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~ 75 (174)
T COG1076 3 GFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLALA 75 (174)
T ss_pred cccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhc
Confidence 44444554433 3456889999999999999987432 44578999999999999999999987766
No 74
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=83.66 E-value=1.8 Score=39.76 Aligned_cols=50 Identities=24% Similarity=0.295 Sum_probs=36.1
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcCC
Q 010253 206 PYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQD 258 (514)
Q Consensus 206 ~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLsD 258 (514)
-..||||++..+.++|.+.|.+|-...+|++. +..-.-..|..|.+.|..
T Consensus 60 A~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kG---GSfYLQSKV~rAKErl~~ 109 (127)
T PF03656_consen 60 ARQILNVKEELSREEIQKRYKHLFKANDPSKG---GSFYLQSKVFRAKERLEQ 109 (127)
T ss_dssp HHHHHT--G--SHHHHHHHHHHHHHHT-CCCT---S-HHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCccCHHHHHHHHHHHHhccCCCcC---CCHHHHHHHHHHHHHHHH
Confidence 34689999999999999999999999999986 455666778888887763
No 75
>PRK05339 PEP synthetase regulatory protein; Provisional
Probab=75.31 E-value=7.5 Score=40.08 Aligned_cols=71 Identities=24% Similarity=0.412 Sum_probs=61.5
Q ss_pred ChHHHHHHHHHhCCcch------------hhHHHHHHHhhCCceeeecCCCChhHHHHHHHHHHhcCccccCCcccccCC
Q 010253 2 SPEEVVRDVLTQFPNVG------------NDLKTLLQMIDDGQAVDIRGISEKSLSKHLRKLFLSLDLKESKDRVFLRRP 69 (514)
Q Consensus 2 ~~~~~~~~~~~~~~~~~------------~~~~~ll~~~d~g~~~~~~gi~~~~~~~~l~~lf~~l~l~~~~~g~~~~~~ 69 (514)
+++.|++-.|++||++. ..+.++|..|....++.+.=|-++.||..|+.....+|+.
T Consensus 17 TAe~v~~A~l~QF~~~~~~~~~~p~v~~~~~~~~i~~~~~~~~~iV~~Tlv~~elr~~l~~~~~~~~i~----------- 85 (269)
T PRK05339 17 TAETVGRAALSQFPNVEFEEHRYPFVRTEEKADEVLEEINAERPIVFYTLVDPELREILEERCAEFGIP----------- 85 (269)
T ss_pred HHHHHHHHHHHhCCCCCeeEEEeCCcCCHHHHHHHHHHHHhcCCEEEEeCCCHHHHHHHHHHHHHcCCC-----------
Confidence 47899999999999763 4588889999888899999999999999999999988876
Q ss_pred CCCCcchhhHHHHHhhhc
Q 010253 70 TDRPTLDVVGTLIQTHME 87 (514)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~ 87 (514)
.+|++++++..-..
T Consensus 86 ----~vdll~p~i~~le~ 99 (269)
T PRK05339 86 ----CIDILGPLIAPLEQ 99 (269)
T ss_pred ----EEeccHHHHHHHHH
Confidence 57899999988633
No 76
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=71.24 E-value=4.1 Score=42.54 Aligned_cols=54 Identities=28% Similarity=0.403 Sum_probs=44.5
Q ss_pred CCHHHHHHHHHHHHHhhCCCCCC-----ChhHHHHHHHHHHHHHHcCChhHHHHHHHhh
Q 010253 216 MSAENIKKRYWKLSLFVHPDKCP-----HPQAHQAFIKLNKAFKELQDPEKRKALDEKI 269 (514)
Q Consensus 216 As~~eIKkAYrkLal~~HPDK~~-----~~~A~e~F~~I~~AY~vLsDp~kR~~YD~~~ 269 (514)
++..+|..+|+..++.+||++.. .....+.|++|.+||.+|++..+|..+|...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~~ 62 (335)
T KOG0724|consen 4 ASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDSWD 62 (335)
T ss_pred ccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhhhh
Confidence 56788999999999999999974 2245677999999999999977666777665
No 77
>PF03618 Kinase-PPPase: Kinase/pyrophosphorylase; InterPro: IPR005177 This entry represents a family of uncharacterised proteins which are predicted to function as phosphotransferases.; GO: 0005524 ATP binding, 0016772 transferase activity, transferring phosphorus-containing groups
Probab=70.74 E-value=13 Score=37.99 Aligned_cols=72 Identities=25% Similarity=0.433 Sum_probs=62.5
Q ss_pred ChHHHHHHHHHhCCcc------------hhhHHHHHHHhhCCceeeecCCCChhHHHHHHHHHHhcCccccCCcccccCC
Q 010253 2 SPEEVVRDVLTQFPNV------------GNDLKTLLQMIDDGQAVDIRGISEKSLSKHLRKLFLSLDLKESKDRVFLRRP 69 (514)
Q Consensus 2 ~~~~~~~~~~~~~~~~------------~~~~~~ll~~~d~g~~~~~~gi~~~~~~~~l~~lf~~l~l~~~~~g~~~~~~ 69 (514)
+++.|++-.|++||++ ...+.++|+.|..-.++.+.=|-|+.||..|.......|+.
T Consensus 11 TAe~v~~A~l~QF~~~~~~~~~~p~I~~~~~~~~il~~i~~~~~iV~~Tlv~~~lr~~l~~~~~~~~i~----------- 79 (255)
T PF03618_consen 11 TAETVARAALAQFPDVEFEIHRFPFIRTEEQLDEILEEIKEENAIVFYTLVDPELREYLEEFCREHGIP----------- 79 (255)
T ss_pred HHHHHHHHHHHhCCCCceEEEECCCcCCHHHHHHHHHHHhccCCEEEEeCCCHHHHHHHHHHHHhcCCC-----------
Confidence 4788999999999987 46789999999998889999999999999999998887775
Q ss_pred CCCCcchhhHHHHHhhhcc
Q 010253 70 TDRPTLDVVGTLIQTHMES 88 (514)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~ 88 (514)
.+|++++++..-.+.
T Consensus 80 ----~~Dll~~~l~~l~~~ 94 (255)
T PF03618_consen 80 ----CVDLLGPLLSALEEF 94 (255)
T ss_pred ----EEeccHHHHHHHHHH
Confidence 589999999886443
No 78
>PF13446 RPT: A repeated domain in UCH-protein
Probab=43.76 E-value=38 Score=26.62 Aligned_cols=27 Identities=11% Similarity=0.298 Sum_probs=23.7
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHH
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSL 230 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal 230 (514)
...|.+|||+++.+.+.|-.+|.....
T Consensus 5 ~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 5 EEAYEILGIDEDTDDDFIISAFQSKVN 31 (62)
T ss_pred HHHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence 356999999999999999999998766
No 79
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=35.17 E-value=70 Score=28.71 Aligned_cols=43 Identities=26% Similarity=0.476 Sum_probs=29.7
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCCC-Chh----HHHHHHHHHHHHHHcC
Q 010253 215 NMSAENIKKRYWKLSLFVHPDKCP-HPQ----AHQAFIKLNKAFKELQ 257 (514)
Q Consensus 215 ~As~~eIKkAYrkLal~~HPDK~~-~~~----A~e~F~~I~~AY~vLs 257 (514)
..+..+++.+.|.+-+++|||... .|. .++-++.++.-.+.|.
T Consensus 5 ~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~ 52 (112)
T PF14687_consen 5 NLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLK 52 (112)
T ss_pred hhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHh
Confidence 456678999999999999999865 332 2344666665555444
No 80
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=34.30 E-value=1.3e+02 Score=25.55 Aligned_cols=47 Identities=6% Similarity=0.051 Sum_probs=34.5
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHH
Q 010253 203 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKL 249 (514)
Q Consensus 203 ~~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I 249 (514)
++|.-.++|+.+-++..||+.|-++..+++.=-..+.....++|..-
T Consensus 2 CRNIk~LfnfdPPAT~~EvrdAAlQfVRKlSGtT~PS~~n~~AFe~A 48 (88)
T COG5552 2 CRNIKELFNFDPPATPVEVRDAALQFVRKLSGTTHPSAANAEAFEAA 48 (88)
T ss_pred ccchHHHhCCCCCCCcHHHHHHHHHHHHHhcCCCCcchhhHHHHHHH
Confidence 36777889999999999999998887777755555544445556543
No 81
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=31.71 E-value=90 Score=30.65 Aligned_cols=38 Identities=16% Similarity=0.156 Sum_probs=29.1
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHHHHcC
Q 010253 213 NHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQ 257 (514)
Q Consensus 213 ~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~I~~AY~vLs 257 (514)
+++|+.+||+.|+.++..+|--| ...-..|-.||+.+-
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~gd-------~~~~~~IEaAYD~IL 38 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAGD-------EKSREAIEAAYDAIL 38 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCC-------HHHHHHHHHHHHHHH
Confidence 46899999999999999998544 345566777777544
No 82
>PRK02363 DNA-directed RNA polymerase subunit delta; Reviewed
Probab=28.26 E-value=97 Score=28.58 Aligned_cols=64 Identities=19% Similarity=0.249 Sum_probs=45.4
Q ss_pred CChHHHHHHHHHhCCcchhhHHHHHHHhhCCceeeecCCCChhHHHHHHHHHHhcCccc----cCCcccccCCC
Q 010253 1 MSPEEVVRDVLTQFPNVGNDLKTLLQMIDDGQAVDIRGISEKSLSKHLRKLFLSLDLKE----SKDRVFLRRPT 70 (514)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~d~g~~~~~~gi~~~~~~~~l~~lf~~l~l~~----~~~g~~~~~~~ 70 (514)
||--+|+.+||.+. .-.=-+..|+..| +...|+++..++.++.+|+-.|++-- .+.|.|+|..-
T Consensus 3 ~S~idvAy~iL~~~-~~~m~f~dL~~ev-----~~~~~~s~e~~~~~iaq~YtdLn~DGRFi~lG~n~WgLr~w 70 (129)
T PRK02363 3 LSLIEVAYEILKEK-KEPMSFYDLVNEI-----QKYLGKSDEEIRERIAQFYTDLNLDGRFISLGDNKWGLRSW 70 (129)
T ss_pred ccHHHHHHHHHHHc-CCcccHHHHHHHH-----HHHhCCCHHHHHHHHHHHHHHHhccCCeeEcCCCceecccc
Confidence 45567899999876 2222344444433 34567999999999999999997754 48888888763
No 83
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=25.53 E-value=1.8e+02 Score=24.72 Aligned_cols=45 Identities=13% Similarity=0.045 Sum_probs=34.6
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHHHHH
Q 010253 204 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIK 248 (514)
Q Consensus 204 ~d~Y~VLGV~~~As~~eIKkAYrkLal~~HPDK~~~~~A~e~F~~ 248 (514)
+|.-.+.|+.+-+|.+||..|-.+..+++.=-..+.....++|..
T Consensus 3 RnI~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~Ps~an~eaF~~ 47 (78)
T PF10041_consen 3 RNIKTLRNFEPPATDEEIRAAALQYVRKVSGFRKPSAANAEAFDR 47 (78)
T ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHHccCCCcchhhHHHHHH
Confidence 566667789999999999999999999887666665445555543
No 84
>PF11731 Cdd1: Pathogenicity locus; InterPro: IPR021725 Cdd1 is expressed as part of the pathogenicity locus operon in several different orders of bacteria []. Many members of the family are annotated as being putative mitomycin resistance proteins but this could not be confirmed.
Probab=20.33 E-value=1.4e+02 Score=26.23 Aligned_cols=49 Identities=27% Similarity=0.474 Sum_probs=37.2
Q ss_pred CChHHHHHHHHHhC---CcchhhHHHHHHHhhCCceeeecCCCChhHHHHHH
Q 010253 1 MSPEEVVRDVLTQF---PNVGNDLKTLLQMIDDGQAVDIRGISEKSLSKHLR 49 (514)
Q Consensus 1 ~~~~~~~~~~~~~~---~~~~~~~~~ll~~~d~g~~~~~~gi~~~~~~~~l~ 49 (514)
|.|..|.|+.|++| |+|+.-+-+-|..|.=-...++.|=....|-.+|.
T Consensus 1 m~p~k~~~~~~~~L~~iP~IG~a~a~DL~~LGi~s~~~L~g~dP~~Ly~~lc 52 (93)
T PF11731_consen 1 MNPAKVKRAGLSDLTDIPNIGKATAEDLRLLGIRSPADLKGRDPEELYERLC 52 (93)
T ss_pred CChHHHHHHHHHHHhcCCCccHHHHHHHHHcCCCCHHHHhCCCHHHHHHHHH
Confidence 88999999987665 99999999999888777777777766655444443
Done!