BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010258
(514 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 11/119 (9%)
Query: 392 ASISRIVMLAEALFEVLDEIHQQSVVLSSRPSMS-SIGSIPAPNEVVESLPVKLYTKSQK 450
SIS IV++ +L ++ Q+ + ++ S ++ S V + +K+ TK+ K
Sbjct: 238 VSISFIVLMIISLVWLIFYYIQRFRYMQAKDQQSRNLCS------VTKKAIMKIPTKTGK 291
Query: 451 YQNEEVAQ---CYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRVCPLCRGDICK 506
+ +E+ C IC+ Y+ D++R+LPC HEFHK C+D WL E HR CP+C+ D+ K
Sbjct: 292 FSDEKDLDSDCCAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIE-HRTCPMCKLDVLK 349
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 10/80 (12%)
Query: 434 NEVVESLPVKLYTKSQKYQNEEVAQ--------CYICLLEYEEGDSVRVLP-CHHEFHKT 484
+ V+++LP+ LY+ + V + C +CLLE+EEGD VR LP C H FH
Sbjct: 123 DSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLE 182
Query: 485 CVDKWLKEIHRVCPLCRGDI 504
C+D+WL+ H CPLCR I
Sbjct: 183 CIDEWLRS-HPNCPLCRTAI 201
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 5/71 (7%)
Query: 434 NEVVESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLP-CHHEFHKTCVDKWLKE 492
++ V SLPV YTK+ K +NE+ C ICL ++EEG++V+V+P C H FH CVD WL
Sbjct: 118 SQAVRSLPVYRYTKAAKQRNED---CVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSS 174
Query: 493 IHRVCPLCRGD 503
+ CPLCR +
Sbjct: 175 -YVTCPLCRSN 184
>sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1
PE=2 SV=1
Length = 338
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 428 GSIPAPNEVVESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVD 487
G+ PA +E+LP+ TKS N E QC +C+ ++EEG + +PC H +HK C+
Sbjct: 195 GTPPASKSAIEALPLVNITKSNL--NSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLL 252
Query: 488 KWLKEIHRVCPLCRGDI 504
WL E+H CP+CR ++
Sbjct: 253 PWL-ELHNSCPVCRHEL 268
>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
Length = 438
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 432 APNEVVESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLK 491
A + + L ++ K K + C +C+ Y+ D VR+LPC H FHK+CVD WL
Sbjct: 251 AAKKAISKLQIRTIKKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLL 310
Query: 492 EIHRVCPLCRGDICKPDSLP 511
+ HR CP+C+ +I K +P
Sbjct: 311 D-HRTCPMCKMNILKALGIP 329
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 432 APNEVVESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLK 491
A + + L V+ K K + C +C+ Y+ D VR+LPC H FHK+CVD WL
Sbjct: 250 AAKKAISKLQVRTIRKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLL 309
Query: 492 EIHRVCPLCRGDICKPDSLP 511
+ HR CP+C+ +I K +P
Sbjct: 310 D-HRTCPMCKMNILKALGIP 328
>sp|Q5M974|RN181_XENTR E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181
PE=2 SV=1
Length = 156
Score = 71.2 bits (173), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 431 PAPNEVVESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWL 490
PA +VVESLP T Q + +C +CLLE+EEG++VR LPC H FH +C+ WL
Sbjct: 54 PAAKKVVESLPKVTVTPEQA---DAALKCPVCLLEFEEGETVRQLPCEHLFHSSCILPWL 110
Query: 491 KEIHRVCPLCRGDI 504
+ + CPLCR ++
Sbjct: 111 GKTNS-CPLCRHEL 123
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%), Gaps = 5/74 (6%)
Query: 436 VVESLPVKLYT--KSQKYQNEEVAQCYICLLEYEEGDSVRVLP-CHHEFHKTCVDKWLKE 492
VVE+ P LY+ K+QK E+ +C ICL E+E+ +++R+LP C H FH C+D WL E
Sbjct: 104 VVETFPTFLYSDVKTQKLGKGEL-ECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWL-E 161
Query: 493 IHRVCPLCRGDICK 506
H CP+CR ++ +
Sbjct: 162 AHVTCPVCRANLAE 175
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 432 APNEVVESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLK 491
A + + L + K K + + C +C+ Y++ D VRVLPC H FHK+CVD WL
Sbjct: 237 AAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLS 296
Query: 492 EIHRVCPLCRGDICK 506
E H CP+C+ +I K
Sbjct: 297 E-HCTCPMCKLNILK 310
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 432 APNEVVESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLK 491
A + + L + K K + + C +C+ Y++ D VRVLPC H FHK+CVD WL
Sbjct: 237 AAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLS 296
Query: 492 EIHRVCPLCRGDICK 506
E H CP+C+ +I K
Sbjct: 297 E-HCTCPMCKLNILK 310
>sp|Q6GPV5|RN181_XENLA E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2
SV=1
Length = 156
Score = 70.5 bits (171), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 431 PAPNEVVESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWL 490
PA +VVESLP T Q + +C +CLLE+EEG++VR LPC H FH C+ WL
Sbjct: 54 PASKKVVESLPKVTVTPEQA---DAALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWL 110
Query: 491 KEIHRVCPLCRGDI 504
+ + CPLCR ++
Sbjct: 111 GKTNS-CPLCRHEL 123
>sp|Q29RU0|RN128_BOVIN E3 ubiquitin-protein ligase RNF128 OS=Bos taurus GN=RNF128 PE=2
SV=1
Length = 431
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Query: 443 KLYTKSQKYQNEEVA----QCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRVCP 498
+L ++QK ++E+ C +C+ Y+ D VR+L C+H FHKTCVD WL E HR CP
Sbjct: 260 RLQLRTQKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHVFHKTCVDPWLLE-HRTCP 318
Query: 499 LCRGDICK 506
+C+ DI K
Sbjct: 319 MCKCDILK 326
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 432 APNEVVESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLK 491
A + + L + K K + + C +C+ Y++ D VR+LPC H FHK+CVD WL
Sbjct: 237 AAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLS 296
Query: 492 EIHRVCPLCRGDICK 506
E H CP+C+ +I K
Sbjct: 297 E-HCTCPMCKLNILK 310
>sp|Q9H6Y7|RN167_HUMAN E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1
SV=1
Length = 350
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 434 NEVVESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEI 493
E ++ +P Y K +Y C ICL EYE+GD +RVLPC H +H CVD WL +
Sbjct: 210 KEQLKQIPTHDYQKGDQYD-----VCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQT 264
Query: 494 HRVCPLCRGDI 504
+ CP+C+ +
Sbjct: 265 RKTCPICKQPV 275
>sp|Q0VD51|RNF13_BOVIN E3 ubiquitin-protein ligase RNF13 OS=Bos taurus GN=RNF13 PE=2 SV=1
Length = 380
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 437 VESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRV 496
++ LPV + K +Y C ICL EYE+GD +R+LPC H +H CVD WL + +
Sbjct: 223 LKKLPVHKFKKGDEYD-----VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKT 277
Query: 497 CPLCRGDI 504
CP+C+ +
Sbjct: 278 CPVCKQKV 285
>sp|O54965|RNF13_MOUSE E3 ubiquitin-protein ligase RNF13 OS=Mus musculus GN=Rnf13 PE=1
SV=2
Length = 381
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 437 VESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRV 496
++ LPV + K +Y C ICL EYE+GD +R+LPC H +H CVD WL + +
Sbjct: 223 LKKLPVHKFKKGDEYD-----VCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKT 277
Query: 497 CPLCRGDI 504
CP+C+ +
Sbjct: 278 CPVCKQKV 285
>sp|Q90972|RNF13_CHICK E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus GN=RNF13 PE=1
SV=1
Length = 381
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 437 VESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRV 496
++ LPV + K +Y C ICL EYE+GD +R+LPC H +H CVD WL + +
Sbjct: 223 LKKLPVHKFKKGDEYD-----VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKT 277
Query: 497 CPLCRGDI 504
CP+C+ +
Sbjct: 278 CPVCKQKV 285
>sp|Q5RCV8|RNF13_PONAB E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii GN=RNF13 PE=2
SV=1
Length = 381
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 437 VESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRV 496
++ LPV + K +Y C ICL EYE+GD +R+LPC H +H CVD WL + +
Sbjct: 223 LKKLPVHKFKKGDEYD-----VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKT 277
Query: 497 CPLCRGDI 504
CP+C+ +
Sbjct: 278 CPVCKQKV 285
>sp|O43567|RNF13_HUMAN E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens GN=RNF13 PE=1
SV=1
Length = 381
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 437 VESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRV 496
++ LPV + K +Y C ICL EYE+GD +R+LPC H +H CVD WL + +
Sbjct: 223 LKKLPVHKFKKGDEYD-----VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKT 277
Query: 497 CPLCRGDI 504
CP+C+ +
Sbjct: 278 CPVCKQKV 285
>sp|Q91XF4|RN167_MOUSE E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2
SV=1
Length = 347
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 434 NEVVESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEI 493
E ++ +P Y K +Y C ICL EYE+GD +RVLPC H +H CVD WL +
Sbjct: 210 KEQLKQIPTHDYQKGDEYD-----VCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQT 264
Query: 494 HRVCPLCRGDI 504
+ CP+C+ +
Sbjct: 265 RKTCPICKQPV 275
>sp|Q66HG0|RNF13_RAT E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus GN=Rnf13
PE=2 SV=1
Length = 380
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 437 VESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRV 496
++ LPV + K +Y C ICL EYE+GD +R+LPC H +H CVD WL + +
Sbjct: 223 LKKLPVHKFKKGDEYD-----VCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKT 277
Query: 497 CPLCRGDI 504
CP+C+ +
Sbjct: 278 CPVCKQKV 285
>sp|Q9D304|RN128_MOUSE E3 ubiquitin-protein ligase RNF128 OS=Mus musculus GN=Rnf128 PE=1
SV=1
Length = 428
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 443 KLYTKSQKYQNEEVA----QCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRVCP 498
KL ++ K ++E+ C +C+ Y+ D VR+L C+H FHKTCVD WL E HR CP
Sbjct: 257 KLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLE-HRTCP 315
Query: 499 LCRGDICK 506
+C+ DI K
Sbjct: 316 MCKCDILK 323
>sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana
GN=At3g19950 PE=2 SV=1
Length = 328
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 428 GSIPAPNEVVESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVD 487
G+ PA +++LP TK E+ QC +C+ E+E+G V+ +PC H FH+ C+
Sbjct: 187 GTPPASKSAIDALPTVKVTKDML--KSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLL 244
Query: 488 KWLKEIHRVCPLCRGDI 504
WL E+H CP+CR ++
Sbjct: 245 PWL-ELHNSCPVCRFEL 260
>sp|Q5XIL0|RN167_RAT E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167
PE=2 SV=1
Length = 349
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 434 NEVVESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEI 493
E ++ +P Y K +Y C ICL EYE+GD +R+LPC H +H CVD WL +
Sbjct: 210 KEQLKQIPTHDYQKGDEYD-----VCAICLDEYEDGDKLRILPCAHAYHSRCVDPWLTQT 264
Query: 494 HRVCPLCRGDI 504
+ CP+C+ +
Sbjct: 265 RKTCPICKQPV 275
>sp|Q3U2C5|RN149_MOUSE E3 ubiquitin-protein ligase RNF149 OS=Mus musculus GN=Rnf149 PE=2
SV=3
Length = 394
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 434 NEVVESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEI 493
+V+ LP+ +K + + C +C+ ++ D +R+LPC H FH+ C+D WL +
Sbjct: 240 KKVIGQLPLHTVKHGEKGIDVDAENCAVCIENFKVKDVIRILPCKHIFHRICIDPWLLD- 298
Query: 494 HRVCPLCRGDICK 506
HR CP+C+ D+ K
Sbjct: 299 HRTCPMCKLDVIK 311
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 435 EVVESLPVKLYTKSQKYQ-NEEVAQCYICLLEYEEGDSVRVLP-CHHEFHKTCVDKWLKE 492
E +E+ P LY++ + + + +C +CL E+E+ +++R++P C H FH CVD WL E
Sbjct: 110 EAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSE 169
Query: 493 IHRVCPLCRGDI 504
H CPLCR D+
Sbjct: 170 -HSTCPLCRADL 180
>sp|Q566M8|RN150_DANRE RING finger protein 150 OS=Danio rerio GN=rnf150 PE=2 SV=1
Length = 419
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 432 APNEVVESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLK 491
A + + L V+ K + + C +C+ Y+ D VR+LPC H FHK CVD WL
Sbjct: 240 AAKKAISQLQVRTIRKGDQETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKCCVDPWLV 299
Query: 492 EIHRVCPLCRGDICKPDSLPS 512
+ HR CP+C+ +I K L S
Sbjct: 300 D-HRTCPMCKMNILKALGLTS 319
>sp|Q5NCP0|RNF43_MOUSE E3 ubiquitin-protein ligase RNF43 OS=Mus musculus GN=Rnf43 PE=2
SV=1
Length = 784
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 459 CYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRVCPLCRGDICKPDSL 510
C ICL E+ EG +RV+ C HEFH+TCVD WL + HR CPLC +I + DS
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRTCVDPWLYQ-HRTCPLCMFNIVEGDSF 322
>sp|Q8BI21|RNF38_MOUSE RING finger protein 38 OS=Mus musculus GN=Rnf38 PE=2 SV=1
Length = 518
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 437 VESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRV 496
+E LP + S +Q+E+ C +C+ ++E +RVLPC+HEFH CVDKWLK +R
Sbjct: 446 IEQLPSYRFNPS-NHQSEQTL-CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKG-NRT 502
Query: 497 CPLCRGD 503
CP+CR D
Sbjct: 503 CPICRAD 509
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 452 QNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRVCPLCR 501
+N+ + C +C+ EY EG+ +R LPC HE+H C+D+WL E + CP+CR
Sbjct: 563 ENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSE-NSTCPICR 611
>sp|Q8TEB7|RN128_HUMAN E3 ubiquitin-protein ligase RNF128 OS=Homo sapiens GN=RNF128 PE=1
SV=1
Length = 428
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 443 KLYTKSQKYQNEEVA----QCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRVCP 498
+L ++ K ++E+ C +C+ Y+ D VR+L C+H FHKTCVD WL E HR CP
Sbjct: 257 RLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLE-HRTCP 315
Query: 499 LCRGDICK 506
+C+ DI K
Sbjct: 316 MCKCDILK 323
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 452 QNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRVCPLCR 501
+N+ + C +C+ EY EG+ +R LPC HE+H C+D+WL E + CP+CR
Sbjct: 561 ENDALKTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSE-NSTCPICR 609
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 452 QNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRVCPLCR 501
+N+ + C +C+ EY EG+ +R LPC HE+H C+D+WL E + CP+CR
Sbjct: 539 ENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSE-NSTCPICR 587
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 452 QNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRVCPLCR 501
+N+ + C +C+ EY EG+ +R LPC HE+H C+D+WL E + CP+CR
Sbjct: 696 ENDALKTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSE-NSTCPICR 744
>sp|Q6NRX0|RN149_XENLA E3 ubiquitin-protein ligase RNF149 OS=Xenopus laevis GN=rnf149 PE=2
SV=1
Length = 397
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 447 KSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRVCPLCRGDICK 506
K +K + + C +C+ Y+ D VR+LPC H FH+ C+D WL E HR CP+C+ D+ K
Sbjct: 252 KGEKGIDIDAENCAVCIENYKTKDLVRILPCKHIFHRLCIDPWLIE-HRTCPMCKLDVIK 310
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 452 QNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRVCPLCR 501
+N+ + C +C+ EY EG+ +R LPC HE+H C+D+WL E + CP+CR
Sbjct: 578 ENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSE-NSTCPICR 626
>sp|Q5RF74|RN128_PONAB E3 ubiquitin-protein ligase RNF128 OS=Pongo abelii GN=RNF128 PE=2
SV=1
Length = 428
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 459 CYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRVCPLCRGDICK 506
C +C+ Y+ D VR+L C+H FHKTCVD WL E HR CP+C+ DI K
Sbjct: 277 CAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLE-HRTCPMCKCDILK 323
>sp|Q9H0F5|RNF38_HUMAN RING finger protein 38 OS=Homo sapiens GN=RNF38 PE=1 SV=4
Length = 515
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 437 VESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRV 496
+E LP + + +Q+E+ C +C+ ++E +RVLPC+HEFH CVDKWLK +R
Sbjct: 443 IEQLPSYRFNPN-NHQSEQTL-CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKA-NRT 499
Query: 497 CPLCRGD 503
CP+CR D
Sbjct: 500 CPICRAD 506
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 434 NEVVESLPVKLY--TKSQKYQNEEVAQCYICLLEYEEGDSVRVLP-CHHEFHKTCVDKWL 490
EVVE+ P +Y K++ +C +CL E+ + D +RVLP C H FH C+D WL
Sbjct: 106 KEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHPDCIDPWL 165
Query: 491 KEIHRVCPLCRGDICKP 507
CPLCR ++ P
Sbjct: 166 AAA-VTCPLCRANLTAP 181
>sp|Q7ZW78|RN181_DANRE E3 ubiquitin-protein ligase RNF181 OS=Danio rerio GN=rnf181 PE=2
SV=2
Length = 156
Score = 67.0 bits (162), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 10/84 (11%)
Query: 431 PAPNEVVESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWL 490
PA VV+SLPV + + Q ++ +C +CLLE+EE +SVR +PC H FH C+ WL
Sbjct: 54 PAAKAVVQSLPVVIISPEQA---DKGVKCPVCLLEFEEQESVREMPCKHLFHTGCILPWL 110
Query: 491 KEIHRVCPLCRGDICKPDSLPSEN 514
+ + CPLCR + LP++N
Sbjct: 111 NKTNS-CPLCRLE------LPTDN 127
>sp|Q93Z92|RING4_ARATH E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana
GN=At4g11680 PE=2 SV=1
Length = 390
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 455 EVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRVCPLCRGDICK 506
E A+C ICL EYE+G +R LPC+H FH TC+DKWL I+ CPLC+ +I K
Sbjct: 334 EDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWL-HINSRCPLCKFNILK 384
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 434 NEVVESLPVKLYT--KSQKYQNEEVAQCYICLLEYEEGDSVRVLP-CHHEFHKTCVDKWL 490
N VVES PV Y+ K K ++++ +C ICL E E+ ++VR+LP C+H FH C+D WL
Sbjct: 98 NAVVESFPVFAYSSVKESKIGSKDL-ECAICLNELEDHETVRLLPICNHLFHIDCIDTWL 156
Query: 491 KEIHRVCPLCRGDICKPDSLPSE 513
H CP+CR ++ + P +
Sbjct: 157 YS-HATCPVCRSNLTAKSNKPGD 178
>sp|Q9LT17|BBR_ARATH E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana
GN=BBR PE=2 SV=1
Length = 340
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 435 EVVESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIH 494
+ + SLP K Y K QN C IC L+YE+ + + +LPC H +H C++ WLK I+
Sbjct: 265 DTIASLPSKRY-KEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLK-IN 322
Query: 495 RVCPLCRGDI 504
+VCP+C ++
Sbjct: 323 KVCPVCSAEV 332
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 436 VVESLPVKLYTKSQKYQ-NEEVAQCYICLLEYEEGDSVRVLP-CHHEFHKTCVDKWLKEI 493
++E+ P Y+ + + +E +C +CL E+E+ +++R++P C H FH C+D WL+
Sbjct: 120 IIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRS- 178
Query: 494 HRVCPLCRGDI 504
H CPLCR D+
Sbjct: 179 HTTCPLCRADL 189
>sp|Q68DV7|RNF43_HUMAN E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens GN=RNF43 PE=1
SV=1
Length = 783
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 459 CYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRVCPLCRGDICKPDSL 510
C ICL E+ EG +RV+ C HEFH+ CVD WL + HR CPLC +I + DS
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQ-HRTCPLCMFNITEGDSF 322
>sp|G3X9R7|RN148_MOUSE RING finger protein 148 OS=Mus musculus GN=Rnf148 PE=2 SV=1
Length = 316
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 459 CYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRVCPLCRGDICKP 507
C +C Y+ D +R+L C H FHKTC+D WL HR CP+C+ DI KP
Sbjct: 269 CVVCFDMYKAQDVIRILTCKHFFHKTCIDPWLLA-HRTCPMCKCDILKP 316
>sp|Q9LRB7|EL5_ORYSJ E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica
GN=EL5.1 PE=1 SV=1
Length = 325
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 435 EVVESLPVKLYTKSQKYQNEEV--------AQCYICLLEYEEGDSVRVLP-CHHEFHKTC 485
EV+ SLPV +Y++S + +C +CL E E+G+ R LP C H FH C
Sbjct: 102 EVLRSLPVTVYSRSTAAAAAKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFHAEC 161
Query: 486 VDKWLKEIHRVCPLCR 501
VD WL H CPLCR
Sbjct: 162 VDMWLGS-HSTCPLCR 176
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 10/91 (10%)
Query: 416 VVLSSRPSMSSIGSIPA----PNEVVESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDS 471
V ++ PS ++ + + PN V++SLPV +T S + + + +C +CL E+EE ++
Sbjct: 76 VFFTADPSTAATSVVASRGLDPN-VIKSLPV--FTFSDETHKDPI-ECAVCLSEFEESET 131
Query: 472 VRVLP-CHHEFHKTCVDKWLKEIHRVCPLCR 501
RVLP C H FH C+D W H CPLCR
Sbjct: 132 GRVLPNCQHTFHVDCIDMWFHS-HSTCPLCR 161
>sp|Q7L0R7|RNF44_HUMAN RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1
Length = 432
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 437 VESLPVKLYTKSQKYQNEEVAQCYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRV 496
+E LP + +Q+E+ C +C ++E +RVLPC+HEFH CVDKWLK +R
Sbjct: 360 IEQLPSYRFNPD-SHQSEQTL-CVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKA-NRT 416
Query: 497 CPLCRGD 503
CP+CR D
Sbjct: 417 CPICRAD 423
>sp|Q8AWW4|RN128_XENLA E3 ubiquitin-protein ligase RNF128 OS=Xenopus laevis GN=rnf128 PE=2
SV=2
Length = 404
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 459 CYICLLEYEEGDSVRVLPCHHEFHKTCVDKWLKEIHRVCPLCRGDICK 506
C +C+ Y+ D VR+L C+H FHK C+D WL E HR CP+C+ DI K
Sbjct: 260 CAVCIEPYKPSDVVRILTCNHFFHKNCIDPWLLE-HRTCPMCKCDILK 306
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 187,850,602
Number of Sequences: 539616
Number of extensions: 7891226
Number of successful extensions: 22742
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 374
Number of HSP's that attempted gapping in prelim test: 21507
Number of HSP's gapped (non-prelim): 1025
length of query: 514
length of database: 191,569,459
effective HSP length: 122
effective length of query: 392
effective length of database: 125,736,307
effective search space: 49288632344
effective search space used: 49288632344
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)