Your job contains 1 sequence.
>010265
MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG
VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNR
RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL
FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS
KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ
IPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQ
KQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEVGSCE
DVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELE
LNAGLGSVLQSTSGIDSETVVQKPVMRLSLTSTA
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010265
(514 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2043560 - symbol:PAPS2 "poly(A) polymerase 2" ... 1402 3.6e-148 2
TAIR|locus:2134113 - symbol:nPAP "nuclear poly(a) polymer... 1444 7.1e-148 1
TAIR|locus:2030943 - symbol:PAPS1 "poly(A) polymerase 1" ... 1181 5.2e-120 1
ZFIN|ZDB-GENE-040426-1256 - symbol:papolg "poly(A) polyme... 712 1.4e-72 2
DICTYBASE|DDB_G0288259 - symbol:papA "poly(A) polymerase"... 732 2.0e-72 1
UNIPROTKB|A5D7N5 - symbol:PAPOLG "Uncharacterized protein... 692 3.5e-68 1
UNIPROTKB|J9NS30 - symbol:PAPOLG "Uncharacterized protein... 689 7.2e-68 1
UNIPROTKB|F1SQL7 - symbol:PAPOLG "Uncharacterized protein... 689 7.2e-68 1
RGD|1310337 - symbol:Papolg "poly(A) polymerase gamma" sp... 689 7.2e-68 1
UNIPROTKB|Q9BWT3 - symbol:PAPOLG "Poly(A) polymerase gamm... 688 9.2e-68 1
MGI|MGI:2442119 - symbol:Papolg "poly(A) polymerase gamma... 684 2.4e-67 1
UNIPROTKB|Q9NRJ5 - symbol:PAPOLB "Poly(A) polymerase beta... 683 3.1e-67 1
UNIPROTKB|G3MYA2 - symbol:PAPOLA "Poly(A) polymerase alph... 679 8.2e-67 1
UNIPROTKB|P25500 - symbol:PAPOLA "Poly(A) polymerase alph... 679 8.2e-67 1
UNIPROTKB|Q3T0A2 - symbol:PAPOLA "Poly(A) polymerase alph... 679 8.2e-67 1
FB|FBgn0015949 - symbol:hrg "hiiragi" species:7227 "Droso... 615 8.7e-67 2
UNIPROTKB|F1SAQ7 - symbol:PAPOLA "Uncharacterized protein... 678 1.1e-66 1
UNIPROTKB|I3L6F0 - symbol:PAPOLA "Uncharacterized protein... 678 1.1e-66 1
RGD|1310946 - symbol:Papolb "poly (A) polymerase beta (te... 678 1.1e-66 1
UNIPROTKB|G3XAH6 - symbol:PAPOLA "Poly(A) polymerase alph... 677 1.3e-66 1
UNIPROTKB|P51003 - symbol:PAPOLA "Poly(A) polymerase alph... 677 1.3e-66 1
MGI|MGI:1932115 - symbol:Papolb "poly (A) polymerase beta... 674 2.8e-66 1
UNIPROTKB|F1NDP1 - symbol:PAPOLA "Uncharacterized protein... 673 3.6e-66 1
UNIPROTKB|F1NKG9 - symbol:PAPOLA "Uncharacterized protein... 673 3.6e-66 1
UNIPROTKB|F1PDS0 - symbol:PAPOLA "Uncharacterized protein... 672 4.5e-66 1
UNIPROTKB|I3LRR6 - symbol:PAPOLB "Uncharacterized protein... 672 4.5e-66 1
MGI|MGI:109301 - symbol:Papola "poly (A) polymerase alpha... 672 4.5e-66 1
ZFIN|ZDB-GENE-030131-3507 - symbol:papola "poly(A) polyme... 652 6.0e-64 1
UNIPROTKB|F1NL95 - symbol:F1NL95 "Uncharacterized protein... 618 1.4e-62 2
UNIPROTKB|F1P3A1 - symbol:F1P3A1 "Uncharacterized protein... 618 1.8e-62 2
WB|WBGene00011791 - symbol:T15H9.6 species:6239 "Caenorha... 624 5.5e-61 1
UNIPROTKB|Q09995 - symbol:T15H9.6 "Protein T15H9.6" speci... 624 5.5e-61 1
WB|WBGene00009658 - symbol:F43G6.5 species:6239 "Caenorha... 617 3.1e-60 1
GENEDB_PFALCIPARUM|PFF1240w - symbol:PFF1240w "poly(A) po... 489 1.6e-59 2
UNIPROTKB|C6KT92 - symbol:PFF1240w "Poly(A) polymerase PA... 489 1.6e-59 2
WB|WBGene00012528 - symbol:pap-1 species:6239 "Caenorhabd... 583 1.2e-56 1
UNIPROTKB|Q9U2P3 - symbol:pap-1 "Protein PAP-1" species:6... 583 1.2e-56 1
POMBASE|SPBC646.04 - symbol:pla1 "poly(A) polymerase Pla1... 558 5.5e-54 1
CGD|CAL0002451 - symbol:PAP1 species:5476 "Candida albica... 546 1.0e-52 1
UNIPROTKB|Q9UW26 - symbol:PAPA "Poly(A) polymerase PAPa" ... 546 1.0e-52 1
SGD|S000001710 - symbol:PAP1 "Poly(A) polymerase, one of ... 537 9.2e-52 1
RGD|1308673 - symbol:Papola "poly (A) polymerase alpha" s... 397 5.1e-45 2
UNIPROTKB|G3V2A0 - symbol:PAPOLA "Poly(A) polymerase alph... 460 1.3e-43 1
TAIR|locus:2084274 - symbol:PAPS3 "poly(A) polymerase 3" ... 413 1.3e-38 1
UNIPROTKB|H0YJ00 - symbol:PAPOLA "Poly(A) polymerase alph... 397 6.3e-37 1
UNIPROTKB|D4A764 - symbol:Papola "Protein Papola" species... 320 1.9e-32 2
UNIPROTKB|F8WAT4 - symbol:PAPOLG "Poly(A) polymerase gamm... 315 3.1e-28 1
UNIPROTKB|F1PYB9 - symbol:PAPOLG "Uncharacterized protein... 199 3.9e-13 1
UNIPROTKB|Q59G05 - symbol:PAPOLG "Poly(A) polymerase gamm... 193 1.9e-12 1
UNIPROTKB|G4N5I8 - symbol:MGG_06121 "Uncharacterized prot... 152 4.5e-07 1
>TAIR|locus:2043560 [details] [associations]
symbol:PAPS2 "poly(A) polymerase 2" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA;ISS]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=RCA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006351 GO:GO:0003723 EMBL:AC005395
GO:GO:0004652 GO:GO:0043631 KO:K14376 eggNOG:COG5186
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376 HSSP:P25500
EMBL:AF255297 EMBL:AY039974 EMBL:AY074533 IPI:IPI00518420
PIR:E84653 RefSeq:NP_565611.1 UniGene:At.14867 SMR:O82312
IntAct:O82312 STRING:O82312 EnsemblPlants:AT2G25850.2 GeneID:817127
KEGG:ath:AT2G25850 TAIR:At2g25850 InParanoid:O82312 OMA:MGSESIN
ProtClustDB:CLSN2688428 BRENDA:2.7.7.19 Genevestigator:O82312
Uniprot:O82312
Length = 800
Score = 1402 (498.6 bits), Expect = 3.6e-148, Sum P(2) = 3.6e-148
Identities = 269/387 (69%), Positives = 308/387 (79%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDE TVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 192 SVLCDVDEQTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 251
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQ YPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E +L F VWDPRKN R
Sbjct: 252 NWALLVARLCQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHR 311
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GNTIC+E+ELNK WS+LF+ Y+F
Sbjct: 312 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMF 371
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVD++AA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDTSK
Sbjct: 372 FEAYKNYLQVDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSK 431
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
HCAFFMGLQR G QE QQFDIRG+V+EF+ +NMYMFW+PGM++ VSH+RR+Q+
Sbjct: 432 QFRHCAFFMGLQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQL 491
Query: 302 PPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGS-------GLKRKKDPESVDQ--DGPE 352
P +VFP GYKR+R R SQQ E G+E GS KRK D E ++ + E
Sbjct: 492 PSFVFPNGYKRSRQSRHQSQQ-CREPGDE-GVGSLSDSVERYAKRKNDDEIMNSRPEKRE 549
Query: 353 KRQSISPQKQDSLSPDHLAPSSVRSGT 379
KR S S D+ SPD + SGT
Sbjct: 550 KRASCSLHTLDAASPD--SSGITTSGT 574
Score = 66 (28.3 bits), Expect = 3.6e-148, Sum P(2) = 3.6e-148
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 460 LENRHLDGNGAFQDRVHEELELNAGLGSVLQSTSGIDSETVVQKPVMR 507
+ENR+L +G F+ + EEL+ N+ L + G SE++ Q +MR
Sbjct: 741 VENRNLHSDGLFKSGLPEELQSNSLLSGTGKLDDGARSESL-QNEMMR 787
Score = 37 (18.1 bits), Expect = 4.2e-145, Sum P(2) = 4.2e-145
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 343 PESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTG 380
P ++D E R S S P+ L +S+ SGTG
Sbjct: 734 PANLDS-AVENRNLHSDGLFKSGLPEELQSNSLLSGTG 770
>TAIR|locus:2134113 [details] [associations]
symbol:nPAP "nuclear poly(a) polymerase" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA;ISS] [GO:0031123
"RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006623 "protein targeting to vacuole"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 EMBL:CP002687
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 IPI:IPI00656923
RefSeq:NP_001031779.1 UniGene:At.25084 ProteinModelPortal:F4JV63
SMR:F4JV63 PRIDE:F4JV63 EnsemblPlants:AT4G32850.8 GeneID:829421
KEGG:ath:AT4G32850 OMA:EDQLEWC PhylomeDB:F4JV63 Uniprot:F4JV63
Length = 765
Score = 1444 (513.4 bits), Expect = 7.1e-148, P = 7.1e-148
Identities = 277/405 (68%), Positives = 325/405 (80%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDEPTVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+F
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDIVAA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
HCAFFMGLQR G QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+
Sbjct: 430 QFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQL 489
Query: 302 PPYVFPEGYKR---TRHPRLASQQRSSENGNEYQTGSGL----KRKKDPESVD--QDGPE 352
PP+VFP GY+R +RH L +S E+G+ +GS + KRK D E +D + PE
Sbjct: 490 PPFVFPNGYRRPRQSRHQNLPGG-KSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPE 548
Query: 353 KRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEI 397
KR S+SPQ D +SP++ S++ +G PV +R ++EI
Sbjct: 549 KRASLSPQSLDIVSPEN---SAITTGW---TPPVCNLRRPPSEEI 587
>TAIR|locus:2030943 [details] [associations]
symbol:PAPS1 "poly(A) polymerase 1" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043631 "RNA
polyadenylation" evidence=IDA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006351 EMBL:AC034106
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
UniGene:At.26787 UniGene:At.73166 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 HSSP:P25500 BRENDA:2.7.7.19
EMBL:BT005990 EMBL:AY323906 EMBL:AK227446 IPI:IPI00540119
PIR:B86315 RefSeq:NP_173240.2 ProteinModelPortal:Q9LMT2 SMR:Q9LMT2
IntAct:Q9LMT2 STRING:Q9LMT2 PaxDb:Q9LMT2 PRIDE:Q9LMT2
EnsemblPlants:AT1G17980.1 GeneID:838378 KEGG:ath:AT1G17980
TAIR:At1g17980 InParanoid:Q9LMT2 OMA:WDTLFEP PhylomeDB:Q9LMT2
ProtClustDB:CLSN2680711 Genevestigator:Q9LMT2 Uniprot:Q9LMT2
Length = 713
Score = 1181 (420.8 bits), Expect = 5.2e-120, P = 5.2e-120
Identities = 214/330 (64%), Positives = 257/330 (77%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L + DE TVRSLNGCRV DQIL+LVPN+++F TTLRC++FWAKRRGVYSNV+GFLGG+
Sbjct: 180 SILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGI 239
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQLYPNA+P++LVSRFFRV+ W WPN + LC+ DE LG VWDPR N +
Sbjct: 240 NWALLVARICQLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPK 299
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLR+M +FQ GN ICE +E NKA W LFEP+ F
Sbjct: 300 DRLHIMPIITPAYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAF 359
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQ+DI AAN DDL WKGWVESRLRQLTL IER + L CHP+PH++ DTS+
Sbjct: 360 FEAYKNYLQIDISAANVDDLRKWKGWVESRLRQLTLKIERH-FKMLHCHPHPHDFQDTSR 418
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
P HC++FMGLQRK G EG+QFDIR +VEEFK ++N Y W PGMEI V HI+R+ +
Sbjct: 419 PL-HCSYFMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSL 477
Query: 302 PPYVFPEGYKRTRHPRLAS--QQRSSENGN 329
P +VFP G R H + R SE+ N
Sbjct: 478 PNFVFPGGV-RPSHTSKGTWDSNRRSEHRN 506
>ZFIN|ZDB-GENE-040426-1256 [details] [associations]
symbol:papolg "poly(A) polymerase gamma"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA;IBA]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IBA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
ZFIN:ZDB-GENE-040426-1256 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 KO:K14376 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOVERGEN:HBG053502 CTD:64895 EMBL:BC056818
IPI:IPI00492667 RefSeq:NP_956915.1 UniGene:Dr.79169
ProteinModelPortal:Q6PGV5 SMR:Q6PGV5 STRING:Q6PGV5 PRIDE:Q6PGV5
GeneID:393593 KEGG:dre:393593 InParanoid:Q6PGV5 NextBio:20814613
ArrayExpress:Q6PGV5 Bgee:Q6PGV5 Uniprot:Q6PGV5
Length = 744
Score = 712 (255.7 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
Identities = 150/335 (44%), Positives = 210/335 (62%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN E+F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 189 SLLRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGV 248
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNAV + LV +FF V++ W WPNPV+L +++ L VWDPR N
Sbjct: 249 SWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPS 308
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST +M ++F+ G T+ +E+ KA WS LFEP F
Sbjct: 309 DRYHLMPIITPAYPQQNSTYNVSTSTRTIMNEEFKNGLTVTDEILQGKADWSKLFEPPNF 368
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ Y L H P + + +
Sbjct: 369 FQQYRHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPGSKE 427
Query: 242 PCAHCAF----FMGLQRKP---GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICV 293
F F+G+ K + V +DI+ + ++ + N+ M K GM I
Sbjct: 428 NRNENDFVSMWFIGISFKKLDNSDCVNIDLTYDIQSFTDTVYRQASNINML-KDGMTIEA 486
Query: 294 SHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENG 328
+H+++KQ+ Y+ PE +R + L RSS G
Sbjct: 487 THVKKKQLHHYLPPELVQRKKKS-LGDINRSSNGG 520
Score = 40 (19.1 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
Identities = 11/42 (26%), Positives = 15/42 (35%)
Query: 311 KRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPE 352
KR P L + ++ + S K P S DG E
Sbjct: 647 KRPHSPSLEDPPKRHKDTEVFSDDSAFKEPYPPSSNGLDGDE 688
>DICTYBASE|DDB_G0288259 [details] [associations]
symbol:papA "poly(A) polymerase" species:44689
"Dictyostelium discoideum" [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA;ISS;IBA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=ISS;IBA] [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
dictyBase:DDB_G0288259 GO:GO:0005524 GO:GO:0046872 GO:GO:0006378
GO:GO:0006351 GenomeReviews:CM000154_GR GO:GO:0003723
EMBL:AAFI02000109 GO:GO:0005847 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003 HSSP:P25500
RefSeq:XP_636814.1 ProteinModelPortal:Q54J73 STRING:Q54J73
EnsemblProtists:DDB0216279 GeneID:8626531 KEGG:ddi:DDB_G0288259
OMA:NINESST ProtClustDB:PTZ00418 Uniprot:Q54J73
Length = 809
Score = 732 (262.7 bits), Expect = 2.0e-72, P = 2.0e-72
Identities = 153/355 (43%), Positives = 212/355 (59%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++DE ++ SLNGCRV DQILKLVPN+ +F LRC+K WA RRG+YSN+ GFLGGV
Sbjct: 222 SFLKNIDEKSILSLNGCRVTDQILKLVPNIPNFRMALRCIKLWAIRRGIYSNILGFLGGV 281
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-LGFSVWDPRKNR 120
+WALL AR+CQLYPN+ PS ++ RFF+VY +W+WP P++LC I E LG VW+P+
Sbjct: 282 SWALLTARICQLYPNSAPSTIIHRFFKVYEIWKWPAPILLCHIQEGGILGPKVWNPK--- 338
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
RDK H MPIITPAYP MNS+YNVS STL++M +F G I ++E + W L E
Sbjct: 339 RDKAHLMPIITPAYPSMNSTYNVSKSTLQLMKSEFVRGAEITRKIETGECTWKNLLEKCD 398
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT- 239
FF Y Y+++D + N +D W+GW+ES+LR L +E K PYP + +
Sbjct: 399 FFTRYSFYIEIDCYSMNEEDSRKWEGWIESKLRFLISNLESTPKMKFAV-PYPKGFTNNL 457
Query: 240 ---SKPCAHC-AFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG---MEIC 292
+ P C +FFMGL + D+ +V EF I ++ +P M+I
Sbjct: 458 HKANNPDQICTSFFMGLSFNFSNTPGADKSVDLTKAVTEFTGIIKDWLRTQPNPDTMDIK 517
Query: 293 VSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVD 347
V +I++KQ+P +V EG P +++RSS G T LK + ++
Sbjct: 518 VQYIKKKQLPAFVKDEG---PEEPVKTTKKRSS-TGEPSATRKKLKSENSDNKLN 568
>UNIPROTKB|A5D7N5 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 CTD:64895 OMA:IDGSSKR OrthoDB:EOG4R23T8
EMBL:DAAA02031008 EMBL:DAAA02031009 EMBL:BC140625 IPI:IPI00695296
RefSeq:NP_001091535.1 UniGene:Bt.24299 SMR:A5D7N5
Ensembl:ENSBTAT00000009749 GeneID:529071 KEGG:bta:529071
InParanoid:A5D7N5 NextBio:20874959 Uniprot:A5D7N5
Length = 740
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 156/396 (39%), Positives = 221/396 (55%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS- 240
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 241 --KPCAHCA-FFMGL--QR-KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
K + + +F+G+ +R + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKR 354
H+++KQ+ Y+ E ++ + L+ RSS ++ D + P
Sbjct: 486 HVKKKQLHHYLPAEILQKKKKQSLSDVTRSSSGPQSKRSSLDSNCLDSSRDTDNETPFN- 544
Query: 355 QSISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDK 390
+S K PD + PS + VI +K
Sbjct: 545 SPVSANKPSK--PD-IPPSGETERNNAEPAAVIVEK 577
>UNIPROTKB|J9NS30 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 OMA:IDGSSKR EMBL:AAEX03007549
Ensembl:ENSCAFT00000044895 Uniprot:J9NS30
Length = 813
Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
Identities = 157/396 (39%), Positives = 224/396 (56%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV ++IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTNEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS- 240
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 241 --KPCAHCA-FFMGL--QR-KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
K + + +F+G+ +R + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKR 354
H+++KQ+ Y+ E ++ + L+ RSS +G + + S D +G
Sbjct: 486 HVKKKQLHHYLPAEILQKKKKQSLSDVSRSS-SGPQSKRSSLDSNCLDSSRDTDNGTPFN 544
Query: 355 QSISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDK 390
+S K PD L PS + V+ +K
Sbjct: 545 SPVSINKPSK--PD-LPPSGETERNNAEPTAVVVEK 577
>UNIPROTKB|F1SQL7 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 KO:K14376 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 CTD:64895 OMA:IDGSSKR EMBL:CU467691
RefSeq:XP_003125156.1 UniGene:Ssc.62549 Ensembl:ENSSSCT00000009186
GeneID:100523547 KEGG:ssc:100523547 Uniprot:F1SQL7
Length = 741
Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
Identities = 160/398 (40%), Positives = 227/398 (57%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS- 240
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 241 --KPCAHCA-FFMGL--QR-KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
K + + +F+G+ +R + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKR 354
H+++KQ+ Y+ E ++ + L+ RSS +G + + S D +G
Sbjct: 486 HVKKKQLHHYLPAEILQKKKKQSLSDVTRSS-SGPQSKRSSLDSNCLDSSRDTDNGTPFN 544
Query: 355 QSISPQKQDSLSPDHLAPSSVRSGTGSNVEP--VIPDK 390
+S K PD + P + +N EP VI +K
Sbjct: 545 SPVSANKPSK--PD-IPP--LGETERNNTEPTAVIVEK 577
>RGD|1310337 [details] [associations]
symbol:Papolg "poly(A) polymerase gamma" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1310337 GO:GO:0005634 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
CTD:64895 OrthoDB:EOG4R23T8 EMBL:CH473996 IPI:IPI00365079
RefSeq:NP_001100714.1 UniGene:Rn.27992 Ensembl:ENSRNOT00000008919
GeneID:305586 KEGG:rno:305586 UCSC:RGD:1310337 NextBio:654829
Uniprot:D3ZAN6
Length = 739
Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
Identities = 166/403 (41%), Positives = 232/403 (57%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS- 240
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 241 --KPCAHCA-FFMGL--QR-KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
K + + +F+G+ +R + E V +DI+ + N K GM+I +
Sbjct: 426 HHKANNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEK- 353
H+++KQ+ Y+ P + + L+ RSS GL+ K+ S+D + +
Sbjct: 486 HVKKKQLHHYL-PAEILQKKKKSLSDVSRSS---------GGLQSKRS--SLDSNCLDSS 533
Query: 354 RQSISPQKQDSLSPDHLAPSSVRSGTG----SNVEP--VIPDK 390
R + S +S H PS+ S TG SN EP VI +K
Sbjct: 534 RDTDSGTPFNSPGSAH-KPSNPDSPTGDAERSNAEPMAVIVEK 575
>UNIPROTKB|Q9BWT3 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0006378 "mRNA polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005524 GO:GO:0005634 EMBL:CH471053
GO:GO:0046872 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 HOVERGEN:HBG053502
EMBL:AY029162 EMBL:AF312211 EMBL:AJ308101 EMBL:AK021867
EMBL:AK023544 EMBL:AK314663 EMBL:BC111701 EMBL:BC113747
IPI:IPI00304442 RefSeq:NP_075045.2 UniGene:Hs.387471
ProteinModelPortal:Q9BWT3 SMR:Q9BWT3 STRING:Q9BWT3
PhosphoSite:Q9BWT3 DMDM:116242699 PaxDb:Q9BWT3 PRIDE:Q9BWT3
Ensembl:ENST00000238714 GeneID:64895 KEGG:hsa:64895 UCSC:uc002sai.3
CTD:64895 GeneCards:GC02P060983 HGNC:HGNC:14982 HPA:CAB017795
neXtProt:NX_Q9BWT3 PharmGKB:PA32934 InParanoid:Q9BWT3 OMA:IDGSSKR
OrthoDB:EOG4R23T8 PhylomeDB:Q9BWT3 GenomeRNAi:64895 NextBio:67037
ArrayExpress:Q9BWT3 Bgee:Q9BWT3 CleanEx:HS_PAPOLG
Genevestigator:Q9BWT3 GermOnline:ENSG00000115421 Uniprot:Q9BWT3
Length = 736
Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
Identities = 160/406 (39%), Positives = 232/406 (57%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS- 240
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 241 --KPCAHCA-FFMGL--QR-KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
K + + +F+G+ +R + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSS---ENGNEYQTGSGLKRKKDPES-VDQDG 350
H+++KQ+ Y+ E ++ + L+ RSS ++ S L +D ++ +
Sbjct: 486 HVKKKQLHHYLPAEILQKKKKQSLSDVNRSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNS 545
Query: 351 PEKRQ---SISPQKQDSLSPDHLA---PSSVRSGTGSNVEPVIPDK 390
P + S+ +++S P + P SV G ++ PVI K
Sbjct: 546 PASKSDSPSVGETERNSAEPAAVIVEKPLSVPPAQGLSI-PVIGAK 590
>MGI|MGI:2442119 [details] [associations]
symbol:Papolg "poly(A) polymerase gamma" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0006378 "mRNA polyadenylation" evidence=IBA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
MGI:MGI:2442119 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 CTD:64895 OMA:IDGSSKR OrthoDB:EOG4R23T8
EMBL:DQ103505 EMBL:AK035810 EMBL:AL662810 EMBL:BC059271
IPI:IPI00317437 RefSeq:NP_766143.2 UniGene:Mm.470599 HSSP:P25500
ProteinModelPortal:Q6PCL9 SMR:Q6PCL9 PhosphoSite:Q6PCL9
PaxDb:Q6PCL9 PRIDE:Q6PCL9 Ensembl:ENSMUST00000020513 GeneID:216578
KEGG:mmu:216578 UCSC:uc007ifp.2 InParanoid:Q6PCL9 NextBio:375224
Bgee:Q6PCL9 CleanEx:MM_PAPOLG Genevestigator:Q6PCL9
GermOnline:ENSMUSG00000020273 Uniprot:Q6PCL9
Length = 739
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 161/393 (40%), Positives = 221/393 (56%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS- 240
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 241 --KPCAHCA-FFMGL--QR-KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
K + + +F+G+ +R + E V +DI+ + N K GM+I +
Sbjct: 426 HHKANNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQD-GPEK 353
H+++KQ+ Y+ P + + L+ RSS G S L S D D G
Sbjct: 486 HVKKKQLHHYL-PAEILQKKKKSLSDVSRSS--GGLQSKRSSLDSTCLDSSRDTDSGTPF 542
Query: 354 RQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPV 386
+S K + PD RS + EPV
Sbjct: 543 NSPVSANKPSN--PDSPTGEIERS----SAEPV 569
>UNIPROTKB|Q9NRJ5 [details] [associations]
symbol:PAPOLB "Poly(A) polymerase beta" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IBA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0006378 GO:GO:0003723
EMBL:AC092610 GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
HOVERGEN:HBG053502 EMBL:AF218840 EMBL:BC036653 IPI:IPI00024525
RefSeq:NP_064529.4 UniGene:Hs.487409 ProteinModelPortal:Q9NRJ5
SMR:Q9NRJ5 STRING:Q9NRJ5 PhosphoSite:Q9NRJ5 DMDM:18203318
PaxDb:Q9NRJ5 PRIDE:Q9NRJ5 DNASU:56903 Ensembl:ENST00000404991
GeneID:56903 KEGG:hsa:56903 CTD:56903 GeneCards:GC07M004897
HGNC:HGNC:15970 MIM:607436 neXtProt:NX_Q9NRJ5 PharmGKB:PA32933
InParanoid:Q9NRJ5 OMA:FPGGVAW OrthoDB:EOG4THVSN GenomeRNAi:56903
NextBio:62363 ArrayExpress:Q9NRJ5 Bgee:Q9NRJ5 CleanEx:HS_PAPOLB
Genevestigator:Q9NRJ5 Uniprot:Q9NRJ5
Length = 636
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 148/362 (40%), Positives = 215/362 (59%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN+++F TLR +K WAK +YSN+ GFLGGV
Sbjct: 188 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGV 247
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNAV S LV +FF V++ W WPNPV+L +E L VWDPR N
Sbjct: 248 SWAMLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPS 307
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVS ST VM+++F+ G I E+ L+KA+WS LFE F
Sbjct: 308 DRYHLMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSF 367
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEY 236
F+ Y++Y+ + A+ L W G VES++R L +E++ + L Q P P E
Sbjct: 368 FQKYKHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKEN 427
Query: 237 VDTSKPCAHCAFFMGLQRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICV 293
D + +GL +KP E++ +DI+ + ++ ++N MF + GM+I
Sbjct: 428 PDMEEFRTMWVIGLGL-KKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITA 485
Query: 294 SHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSE-NGNEYQTGSGLKRKKD-PESVD--QD 349
H+RRK++ + P + + +R ++ N + + +G + P S +
Sbjct: 486 MHLRRKELHQ-LLPHHVLQDKKAHSTEGRRLTDLNDSSFDLSAGCENSMSVPSSTSTMKT 544
Query: 350 GP 351
GP
Sbjct: 545 GP 546
>UNIPROTKB|G3MYA2 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
taurus" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 EMBL:DAAA02053163
Ensembl:ENSBTAT00000063150 Uniprot:G3MYA2
Length = 718
Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
Identities = 159/414 (38%), Positives = 229/414 (55%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV
Sbjct: 188 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGV 247
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N
Sbjct: 248 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPS 307
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE F
Sbjct: 308 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNF 367
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEY 236
F+ Y++Y+ + A L W G VES++R L +E++ + L Q P P E
Sbjct: 368 FQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKEN 427
Query: 237 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEI 291
D + + +GL K E E D+ ++ F + +IN MF + M+I
Sbjct: 428 PDKEE--FRTMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKI 483
Query: 292 CVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ--TGSGLKRKKDPE-SVDQ 348
H++RKQ+ + P H L +++ S G + S L D + S+
Sbjct: 484 AAMHVKRKQLHQ-LLPS------HV-LQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSV 535
Query: 349 DGPEKRQSISPQKQDSLSPDHLAPS-SVRSGTGSNVEPVIPDKRVLNQEIAEGG 401
P SP S +P+ +V + + +N++ +N + GG
Sbjct: 536 PSPTSAMKTSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSLPQINSSESSGG 589
>UNIPROTKB|P25500 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IDA] [GO:0000287
"magnesium ion binding" evidence=IDA] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0043631 "RNA polyadenylation"
evidence=IDA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IDA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000287 GO:GO:0006378 GO:GO:0003723
GO:GO:0030145 GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003 EMBL:X61585
EMBL:X63436 IPI:IPI00686724 IPI:IPI00699231 PIR:S17875 PIR:S17925
PIR:S18642 RefSeq:NP_788820.1 UniGene:Bt.109586 PDB:1F5A PDB:1Q78
PDB:1Q79 PDBsum:1F5A PDBsum:1Q78 PDBsum:1Q79
ProteinModelPortal:P25500 SMR:P25500 STRING:P25500
Ensembl:ENSBTAT00000005300 GeneID:338051 KEGG:bta:338051 CTD:10914
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 InParanoid:P25500 OMA:SPVTTQG
EvolutionaryTrace:P25500 NextBio:20812502 ArrayExpress:P25500
Uniprot:P25500
Length = 739
Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
Identities = 159/414 (38%), Positives = 229/414 (55%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV
Sbjct: 188 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGV 247
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N
Sbjct: 248 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPS 307
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE F
Sbjct: 308 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNF 367
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEY 236
F+ Y++Y+ + A L W G VES++R L +E++ + L Q P P E
Sbjct: 368 FQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKEN 427
Query: 237 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEI 291
D + + +GL K E E D+ ++ F + +IN MF + M+I
Sbjct: 428 PDKEE--FRTMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKI 483
Query: 292 CVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ--TGSGLKRKKDPE-SVDQ 348
H++RKQ+ + P H L +++ S G + S L D + S+
Sbjct: 484 AAMHVKRKQLHQ-LLPS------HV-LQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSV 535
Query: 349 DGPEKRQSISPQKQDSLSPDHLAPS-SVRSGTGSNVEPVIPDKRVLNQEIAEGG 401
P SP S +P+ +V + + +N++ +N + GG
Sbjct: 536 PSPTSAMKTSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSLPQINSSESSGG 589
>UNIPROTKB|Q3T0A2 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
taurus" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003 UniGene:Bt.109586
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 OrthoDB:EOG4J6RQB EMBL:DAAA02053163
EMBL:BC102481 IPI:IPI00705304 SMR:Q3T0A2 STRING:Q3T0A2
Ensembl:ENSBTAT00000021001 Uniprot:Q3T0A2
Length = 693
Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
Identities = 159/414 (38%), Positives = 229/414 (55%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV
Sbjct: 188 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGV 247
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N
Sbjct: 248 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPS 307
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE F
Sbjct: 308 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNF 367
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEY 236
F+ Y++Y+ + A L W G VES++R L +E++ + L Q P P E
Sbjct: 368 FQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKEN 427
Query: 237 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEI 291
D + + +GL K E E D+ ++ F + +IN MF + M+I
Sbjct: 428 PDKEE--FRTMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKI 483
Query: 292 CVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ--TGSGLKRKKDPE-SVDQ 348
H++RKQ+ + P H L +++ S G + S L D + S+
Sbjct: 484 AAMHVKRKQLHQ-LLPS------HV-LQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSV 535
Query: 349 DGPEKRQSISPQKQDSLSPDHLAPS-SVRSGTGSNVEPVIPDKRVLNQEIAEGG 401
P SP S +P+ +V + + +N++ +N + GG
Sbjct: 536 PSPTSAMKTSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSLPQINSSESSGG 589
>FB|FBgn0015949 [details] [associations]
symbol:hrg "hiiragi" species:7227 "Drosophila melanogaster"
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IDA;NAS] [GO:0006378 "mRNA polyadenylation"
evidence=ISS;IBA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HSSP:P25500 EMBL:AY113434 ProteinModelPortal:Q8MZ09
SMR:Q8MZ09 STRING:Q8MZ09 PaxDb:Q8MZ09 PRIDE:Q8MZ09
FlyBase:FBgn0015949 InParanoid:Q8MZ09 OrthoDB:EOG42547T ChiTaRS:HRG
ArrayExpress:Q8MZ09 Bgee:Q8MZ09 Uniprot:Q8MZ09
Length = 659
Score = 615 (221.5 bits), Expect = 8.7e-67, Sum P(2) = 8.7e-67
Identities = 116/232 (50%), Positives = 156/232 (67%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D +VRSLNGCRV D+IL LVPN+E+F LR +K WAK+ G+YSN G+ GGV
Sbjct: 196 NLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 255
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR CQLYPNA + LV +FF V++ W+WPNPV+L D L F VWDPR N
Sbjct: 256 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNAS 315
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS++NVS ST +V++ +F G I +E+ L + W LFE F
Sbjct: 316 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSF 375
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP 233
F YR+++ + + + ADD L W G VES++R L +ER+ + L H P
Sbjct: 376 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLISNLERNPHIAL-AHVNP 426
Score = 82 (33.9 bits), Expect = 8.7e-67, Sum P(2) = 8.7e-67
Identities = 42/156 (26%), Positives = 69/156 (44%)
Query: 239 TSKPCAHCA-FFMGLQRKPGEVVQEGQQFDIRGSVEEFKL-SINMYMFWKPGMEICVSHI 296
TS P C+ +F+GL+ + E + I+ E + +N+ M K GM I H+
Sbjct: 461 TSAP--FCSMWFIGLEFERSENLNVDLTESIQNFTEHVMMHGVNIKML-KEGMTIDARHV 517
Query: 297 RRKQIPPYVFPEGYKRTRHPRLASQQRSSEN--GNEYQTGSGLKRKKDPESVDQD---GP 351
+RKQ+ Y+ + KR R + S + N + + L + +DP Q G
Sbjct: 518 KRKQLSLYLDSDFLKRERKS-MESHNNFNNTLLANRKRLSTELAQSQDPLPPGQQPSSGN 576
Query: 352 EKRQSISP-QK-QDSLSPDHLAPSSVRSGTGSNVEP 385
R S + Q+ DSL+ ++ SS G G+ P
Sbjct: 577 RGRDSGAKIQRLSDSLTEENSNASS-DMGAGTPTTP 611
>UNIPROTKB|F1SAQ7 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 EMBL:CT827800
Ensembl:ENSSSCT00000002783 Uniprot:F1SAQ7
Length = 693
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 159/414 (38%), Positives = 229/414 (55%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV
Sbjct: 188 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGV 247
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N
Sbjct: 248 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPS 307
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE F
Sbjct: 308 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNF 367
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEY 236
F+ Y++Y+ + A L W G VES++R L +E++ + L Q P P E
Sbjct: 368 FQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKEN 427
Query: 237 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEI 291
D + + +GL K E E D+ ++ F + +IN MF + M+I
Sbjct: 428 PDKEE--FRTMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKI 483
Query: 292 CVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ--TGSGLKRKKDPE-SVDQ 348
H++RKQ+ + P H L +++ S +G S L D + S+
Sbjct: 484 AAMHVKRKQLHQ-LLPN------HV-LQKKKKHSTDGVRLTPLNDSSLDLSMDSDNSMSV 535
Query: 349 DGPEKRQSISPQKQDSLSPDHLAPS-SVRSGTGSNVEPVIPDKRVLNQEIAEGG 401
P SP S +P+ +V + + +N++ +N + GG
Sbjct: 536 PSPTSAMKTSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQVNSSESSGG 589
>UNIPROTKB|I3L6F0 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 OMA:SPVTTQG EMBL:CT827800
Ensembl:ENSSSCT00000027948 Uniprot:I3L6F0
Length = 734
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 159/414 (38%), Positives = 229/414 (55%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV
Sbjct: 204 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGV 263
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N
Sbjct: 264 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPS 323
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE F
Sbjct: 324 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNF 383
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEY 236
F+ Y++Y+ + A L W G VES++R L +E++ + L Q P P E
Sbjct: 384 FQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKEN 443
Query: 237 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEI 291
D + + +GL K E E D+ ++ F + +IN MF + M+I
Sbjct: 444 PDKEE--FRTMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKI 499
Query: 292 CVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ--TGSGLKRKKDPE-SVDQ 348
H++RKQ+ + P H L +++ S +G S L D + S+
Sbjct: 500 AAMHVKRKQLHQ-LLPN------HV-LQKKKKHSTDGVRLTPLNDSSLDLSMDSDNSMSV 551
Query: 349 DGPEKRQSISPQKQDSLSPDHLAPS-SVRSGTGSNVEPVIPDKRVLNQEIAEGG 401
P SP S +P+ +V + + +N++ +N + GG
Sbjct: 552 PSPTSAMKTSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQVNSSESSGG 605
>RGD|1310946 [details] [associations]
symbol:Papolb "poly (A) polymerase beta (testis specific)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=ISO] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1310946 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 EMBL:CH474012 GO:GO:0004652 GO:GO:0043631 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOVERGEN:HBG053502 CTD:56903
EMBL:BC079046 IPI:IPI00363752 RefSeq:NP_001012020.1
UniGene:Rn.210888 SMR:Q6AYH1 GeneID:304300 KEGG:rno:304300
UCSC:RGD:1310946 NextBio:652828 Genevestigator:Q6AYH1
Uniprot:Q6AYH1
Length = 642
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 141/309 (45%), Positives = 195/309 (63%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN++ F TLR +K WAK +YSN+ GFLGGV
Sbjct: 189 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGV 248
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N
Sbjct: 249 SWAMLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPS 308
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVS ST VM+++F+ G I E+ LNKA+WS LFE F
Sbjct: 309 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSF 368
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEY 236
F+ Y++Y+ + A L W G VES++R L +E++ + L Q P P E
Sbjct: 369 FQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKEN 428
Query: 237 VDTSKPCAHCAFFMGLQ-RKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEIC 292
VD + + +GL +KP E++ +DI+ + ++ +IN MF + M+I
Sbjct: 429 VDKEE--FRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIA 485
Query: 293 VSHIRRKQI 301
H+RRK++
Sbjct: 486 AMHLRRKEL 494
>UNIPROTKB|G3XAH6 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 EMBL:AL163051
Gene3D:3.30.70.590 SUPFAM:SSF55003 HGNC:HGNC:14981 ChiTaRS:PAPOLA
ProteinModelPortal:G3XAH6 SMR:G3XAH6 Ensembl:ENST00000392990
ArrayExpress:G3XAH6 Bgee:G3XAH6 Uniprot:G3XAH6
Length = 724
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 159/414 (38%), Positives = 229/414 (55%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV
Sbjct: 188 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGV 247
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N
Sbjct: 248 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPS 307
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE F
Sbjct: 308 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNF 367
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEY 236
F+ Y++Y+ + A L W G VES++R L +E++ + L Q P P E
Sbjct: 368 FQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKEN 427
Query: 237 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEI 291
D + + +GL K E E D+ ++ F + +IN MF + M+I
Sbjct: 428 PDKEE--FRTMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKI 483
Query: 292 CVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQT--GSGLKRKKDPE-SVDQ 348
H++RKQ+ + P H L +++ S G + S L D + S+
Sbjct: 484 AAMHVKRKQLHQ-LLPN------HV-LQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSV 535
Query: 349 DGPEKRQSISPQKQDSLSPDHLAPS-SVRSGTGSNVEPVIPDKRVLNQEIAEGG 401
P SP S +P+ +V + + +N++ +N + GG
Sbjct: 536 PSPTSATKTSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQVNSSESSGG 589
>UNIPROTKB|P51003 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IBA] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006378 "mRNA
polyadenylation" evidence=NAS] [GO:0003723 "RNA binding"
evidence=NAS] [GO:0043631 "RNA polyadenylation" evidence=ISS]
[GO:0000287 "magnesium ion binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0030145 "manganese ion binding"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0031124 "mRNA 3'-end processing"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_71 InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005524 GO:GO:0005737 GO:GO:0005654 GO:GO:0000287
Reactome:REACT_1675 GO:GO:0006378 GO:GO:0003723 GO:GO:0030145
GO:GO:0000398 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0004652
Reactome:REACT_78 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 CTD:10914 HOVERGEN:HBG053502 OMA:SPVTTQG
EMBL:BC000927 EMBL:BC036014 EMBL:BX248301 EMBL:BX248753
EMBL:BX161482 EMBL:X76770 IPI:IPI00384028 IPI:IPI01025082
RefSeq:NP_001238935.1 RefSeq:NP_001238936.1 RefSeq:NP_116021.2
UniGene:Hs.253726 ProteinModelPortal:P51003 SMR:P51003
DIP:DIP-27610N IntAct:P51003 MINT:MINT-125699 STRING:P51003
PhosphoSite:P51003 DMDM:59803092 PaxDb:P51003 PeptideAtlas:P51003
PRIDE:P51003 Ensembl:ENST00000216277 Ensembl:ENST00000557320
Ensembl:ENST00000557471 GeneID:10914 KEGG:hsa:10914 UCSC:uc001yfo.3
UCSC:uc001yfq.3 GeneCards:GC14P096969 HGNC:HGNC:14981 HPA:HPA001788
MIM:605553 neXtProt:NX_P51003 PharmGKB:PA32932 InParanoid:P51003
OrthoDB:EOG4J6RQB PhylomeDB:P51003 ChiTaRS:PAPOLA GenomeRNAi:10914
NextBio:41453 ArrayExpress:P51003 Bgee:P51003 CleanEx:HS_PAPOLA
Genevestigator:P51003 GermOnline:ENSG00000090060 Uniprot:P51003
Length = 745
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 159/414 (38%), Positives = 229/414 (55%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV
Sbjct: 188 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGV 247
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N
Sbjct: 248 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPS 307
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE F
Sbjct: 308 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNF 367
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEY 236
F+ Y++Y+ + A L W G VES++R L +E++ + L Q P P E
Sbjct: 368 FQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKEN 427
Query: 237 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEI 291
D + + +GL K E E D+ ++ F + +IN MF + M+I
Sbjct: 428 PDKEE--FRTMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKI 483
Query: 292 CVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQT--GSGLKRKKDPE-SVDQ 348
H++RKQ+ + P H L +++ S G + S L D + S+
Sbjct: 484 AAMHVKRKQLHQ-LLPN------HV-LQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSV 535
Query: 349 DGPEKRQSISPQKQDSLSPDHLAPS-SVRSGTGSNVEPVIPDKRVLNQEIAEGG 401
P SP S +P+ +V + + +N++ +N + GG
Sbjct: 536 PSPTSATKTSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQVNSSESSGG 589
>MGI|MGI:1932115 [details] [associations]
symbol:Papolb "poly (A) polymerase beta (testis specific)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISS;ISA;IBA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IPI] [GO:0006369 "termination of RNA polymerase
II transcription" evidence=IBA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=ISA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 MGI:MGI:1932115 GO:GO:0005783
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0006397 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 GO:GO:0043631 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
HOVERGEN:HBG053502 CTD:56903 OMA:FPGGVAW OrthoDB:EOG4THVSN
EMBL:AF039957 EMBL:AB030729 IPI:IPI00230087 RefSeq:NP_064327.1
UniGene:Mm.441372 ProteinModelPortal:Q9WVP6 SMR:Q9WVP6
MINT:MINT-6167909 STRING:Q9WVP6 PhosphoSite:Q9WVP6 PaxDb:Q9WVP6
PRIDE:Q9WVP6 GeneID:56522 KEGG:mmu:56522 InParanoid:Q9WVP6
NextBio:312850 Bgee:Q9WVP6 CleanEx:MM_PAPOLB Genevestigator:Q9WVP6
Uniprot:Q9WVP6
Length = 641
Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
Identities = 140/309 (45%), Positives = 194/309 (62%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN++ F TLR +K WAK +YSN+ GFLGGV
Sbjct: 188 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGV 247
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N
Sbjct: 248 SWAMLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPS 307
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVS ST VM+++F+ G I E+ LNKA+WS LFE F
Sbjct: 308 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSF 367
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEY 236
F+ Y++Y+ + A L W G VES++R L +E++ + L Q P P E
Sbjct: 368 FQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKET 427
Query: 237 VDTSKPCAHCAFFMGLQ-RKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEIC 292
D + + +GL +KP E++ +DI+ + ++ +IN MF + M+I
Sbjct: 428 ADKEE--FRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIA 484
Query: 293 VSHIRRKQI 301
H+RRK++
Sbjct: 485 AMHLRRKEL 493
>UNIPROTKB|F1NDP1 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
EMBL:AADN02003685 IPI:IPI00587050 Ensembl:ENSGALT00000018089
ArrayExpress:F1NDP1 Uniprot:F1NDP1
Length = 620
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 148/339 (43%), Positives = 204/339 (60%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV
Sbjct: 69 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGV 128
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N
Sbjct: 129 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPS 188
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE F
Sbjct: 189 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNF 248
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEY 236
F+ Y++Y+ + A L W G VES++R L +E++ + L Q P P E
Sbjct: 249 FQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKEN 308
Query: 237 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEI 291
D + + +GL K E E D+ ++ F + +IN MF + M+I
Sbjct: 309 PDKEE--YRTMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKI 364
Query: 292 CVSHIRRKQI----PPYVFPEGYKR-TRHPRLASQQRSS 325
H++RKQ+ P +V + K T RL + SS
Sbjct: 365 AARHVKRKQLHQLLPNHVLQKKKKHSTEGVRLTALNDSS 403
>UNIPROTKB|F1NKG9 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006378 "mRNA polyadenylation" evidence=IBA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0005737
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 CTD:10914
GeneTree:ENSGT00390000017928 OMA:SPVTTQG EMBL:AADN02003685
IPI:IPI00820771 RefSeq:NP_001185530.1 UniGene:Gga.4316
Ensembl:ENSGALT00000037556 GeneID:395878 KEGG:gga:395878
NextBio:20815945 ArrayExpress:F1NKG9 Uniprot:F1NKG9
Length = 737
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 148/339 (43%), Positives = 204/339 (60%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV
Sbjct: 187 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEY 236
F+ Y++Y+ + A L W G VES++R L +E++ + L Q P P E
Sbjct: 367 FQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKEN 426
Query: 237 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEI 291
D + + +GL K E E D+ ++ F + +IN MF + M+I
Sbjct: 427 PDKEE--YRTMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKI 482
Query: 292 CVSHIRRKQI----PPYVFPEGYKR-TRHPRLASQQRSS 325
H++RKQ+ P +V + K T RL + SS
Sbjct: 483 AARHVKRKQLHQLLPNHVLQKKKKHSTEGVRLTALNDSS 521
>UNIPROTKB|F1PDS0 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IBA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0005737 GO:GO:0006378 GO:GO:0003723
GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 OMA:SPVTTQG
EMBL:AAEX03005970 EMBL:AAEX03005971 Ensembl:ENSCAFT00000028221
Uniprot:F1PDS0
Length = 745
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 148/339 (43%), Positives = 203/339 (59%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV
Sbjct: 194 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGV 253
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N
Sbjct: 254 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPS 313
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE F
Sbjct: 314 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNF 373
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEY 236
F+ Y++Y+ + A L W G VES++R L +E++ + L Q P P E
Sbjct: 374 FQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKEN 433
Query: 237 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEI 291
D + + +GL K E E D+ ++ F + +IN MF + M+I
Sbjct: 434 PDKEE--FRTMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKI 489
Query: 292 CVSHIRRKQI----PPYVFPEGYKR-TRHPRLASQQRSS 325
H++RKQ+ P +V + K T RL SS
Sbjct: 490 AAMHVKRKQLHQLLPNHVLQKKKKHSTEGVRLTPLNDSS 528
>UNIPROTKB|I3LRR6 [details] [associations]
symbol:PAPOLB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005783 GO:GO:0005634 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 OMA:FPGGVAW EMBL:CU928347
Ensembl:ENSSSCT00000031977 Uniprot:I3LRR6
Length = 636
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 158/414 (38%), Positives = 231/414 (55%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN+++F TLR +K WAK +YSN+ GFLGGV
Sbjct: 202 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAVKLWAKCHNIYSNILGFLGGV 261
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N
Sbjct: 262 SWAMLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPS 321
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVS ST VM+++F+ G I E+ L+KA+WS LFE F
Sbjct: 322 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSF 381
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEY 236
F+ Y++Y+ + A L W G VES++R L +E++ + L Q P P E
Sbjct: 382 FQKYKHYIALLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPRES 441
Query: 237 VDTSKPCAHCAFFMGLQR-KPGEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVS 294
D + + L+R + +++ +DI+ + ++ ++N MF + M+I
Sbjct: 442 PDKEEFRTMWVIGLVLKRPENSDILSIDLTYDIQSFTDTVYRQAVNSKMF-EMDMKIAAM 500
Query: 295 HIRRKQI----PPYVFPEGYKRTRHPRLASQQRSSENGNEYQ---TGSGLKRKKDPESVD 347
H+RRK++ P +V P+ K+T S SS G TGS R P
Sbjct: 501 HLRRKELHQLLPNHVLPQ--KKTPSHSEDSVSVSSFPGAVKTGPVTGSSPGRSS-PALAM 557
Query: 348 QDGPEKRQSISPQKQDSLSPDHLAPSSVRSGT---GSNVEPVIPDKRVLNQEIA 398
P ++ +P +P S S + ++ ++P K V+ + I+
Sbjct: 558 MAAPVISAQVTDVSLQQANPSE-SPGSASSESIPHAGSLPAILPPKPVVTRVIS 610
>MGI|MGI:109301 [details] [associations]
symbol:Papola "poly (A) polymerase alpha" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IBA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0006369 "termination of
RNA polymerase II transcription" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
MGI:MGI:109301 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0000287 GO:GO:0006378 GO:GO:0003723 GO:GO:0030145
GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376 eggNOG:COG5186
Gene3D:3.30.70.590 SUPFAM:SSF55003 CTD:10914
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 OMA:SPVTTQG OrthoDB:EOG4J6RQB ChiTaRS:PAPOLA
EMBL:U52197 EMBL:U58134 EMBL:U58135 EMBL:AB086650 IPI:IPI00224655
IPI:IPI00224656 IPI:IPI00266738 IPI:IPI00467146 RefSeq:NP_035242.1
UniGene:Mm.255877 ProteinModelPortal:Q61183 SMR:Q61183
STRING:Q61183 PhosphoSite:Q61183 PaxDb:Q61183 PRIDE:Q61183
DNASU:18789 Ensembl:ENSMUST00000021535 Ensembl:ENSMUST00000109901
Ensembl:ENSMUST00000166735 GeneID:18789 KEGG:mmu:18789
UCSC:uc007oyv.1 UCSC:uc007oyx.1 InParanoid:Q61183 NextBio:295064
Bgee:Q61183 CleanEx:MM_PAPOLA Genevestigator:Q61183
GermOnline:ENSMUSG00000021111 Uniprot:Q61183
Length = 739
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 145/328 (44%), Positives = 200/328 (60%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV
Sbjct: 188 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGV 247
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N
Sbjct: 248 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPS 307
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE F
Sbjct: 308 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNF 367
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEY 236
F+ Y++Y+ + A L W G VES++R L +E++ + L Q P P E
Sbjct: 368 FQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKES 427
Query: 237 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEI 291
D + + +GL K E E D+ ++ F + +IN MF + M+I
Sbjct: 428 PDREE--FRTMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKI 483
Query: 292 CVSHIRRKQI----PPYVFPEGYKRTRH 315
H++RKQ+ P +V KR +H
Sbjct: 484 AAMHVKRKQLHQLLPSHVLQ---KRKKH 508
>ZFIN|ZDB-GENE-030131-3507 [details] [associations]
symbol:papola "poly(A) polymerase alpha"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA;IBA]
[GO:0005634 "nucleus" evidence=IEA;IBA] [GO:0031123 "RNA 3'-end
processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0006378 "mRNA polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 ZFIN:ZDB-GENE-030131-3507 GO:GO:0005634
GO:GO:0005737 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 EMBL:AL953887 KO:K14376 Gene3D:3.30.70.590
SUPFAM:SSF55003 CTD:10914 GeneTree:ENSGT00390000017928
HOGENOM:HOG000204376 HOVERGEN:HBG053502 IPI:IPI00860939
RefSeq:NP_991321.2 UniGene:Dr.25690 SMR:Q5SNY2
Ensembl:ENSDART00000053858 GeneID:404041 KEGG:dre:404041
NextBio:20817515 Uniprot:Q5SNY2
Length = 723
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 139/335 (41%), Positives = 199/335 (59%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D +RSLNGCRV D+IL LVPN+E+F TLR +K WAKR +YSN+ GFLGGV+
Sbjct: 188 LLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVS 247
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQLYPNAV + LV +FF V++ W WPNPV+L ++ L VWDPR D
Sbjct: 248 WAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSD 307
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS+YNVS ST +M+++F+ G I +E+ NKA WS LFE FF
Sbjct: 308 RYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFF 367
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYV 237
+ Y++Y+ + A L W G VES++R L +E++ + L Q P P E
Sbjct: 368 QKYKHYIVLLASAQTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPGPKEGN 427
Query: 238 DTSKPCAHCAFFMGLQRKPG-EVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSH 295
D + + ++ G E + FDI+ + ++ +I MF + M+I H
Sbjct: 428 DKEEFSTMWVIGIVFKKMEGSENLNVDLTFDIQSFTDTVYRQAITSKMF-EQDMKITAMH 486
Query: 296 IRRKQIPPYVFPE-GYKRTRHPRLASQQRSSENGN 329
++RKQ+ + PE R++ + R+ + N
Sbjct: 487 VKRKQLHQ-LLPEVAIHRSKRKHSSDGVRAMNDSN 520
>UNIPROTKB|F1NL95 [details] [associations]
symbol:F1NL95 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008811
"chloramphenicol O-acetyltransferase activity" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] InterPro:IPR001707
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 ProDom:PD002660 GO:GO:0005634
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
GO:GO:0008811 EMBL:AADN02046885 EMBL:AADN02046884 IPI:IPI00600779
Ensembl:ENSGALT00000012751 OMA:RYHVMPI Uniprot:F1NL95
Length = 748
Score = 618 (222.6 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 121/278 (43%), Positives = 172/278 (61%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E+F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQL+PNA+ S LV +FF +++ W WPNPV+L +E L VWDPR N
Sbjct: 247 SWAMLVARTCQLHPNALASTLVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST V++++ ++G + E+ ++ W LFE F
Sbjct: 307 DRYHVMPIITPAYPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGRSDWPKLFEQPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ Y++Y+ + + L W G VES++R L +ER+ + + H P + +
Sbjct: 367 FQKYKHYIVLTASTYTEEHHLEWVGLVESKIRVLVGNLERNEFINI-AHVNPQSFPGNQE 425
Query: 242 PCAHCAF----FMGLQRKPGEVVQEGQQFDIRGSVEEF 275
C + F+G+ + E E + D+ ++ F
Sbjct: 426 HCKQSRYVSMWFLGIIFRKLESA-ESTKIDLTYDIQSF 462
Score = 39 (18.8 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 329 NEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLS 366
N Q SGL+ K+ + + S +P SLS
Sbjct: 512 NISQNASGLRCKRASSNESLNSSRDNHSRTPYNSSSLS 549
>UNIPROTKB|F1P3A1 [details] [associations]
symbol:F1P3A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008811 "chloramphenicol
O-acetyltransferase activity" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR001707
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 ProDom:PD002660 GO:GO:0005634
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
GO:GO:0008811 EMBL:AADN02046885 EMBL:AADN02046884 IPI:IPI00820385
Ensembl:ENSGALT00000040310 Uniprot:F1P3A1
Length = 738
Score = 618 (222.6 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 121/278 (43%), Positives = 172/278 (61%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E+F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQL+PNA+ S LV +FF +++ W WPNPV+L +E L VWDPR N
Sbjct: 247 SWAMLVARTCQLHPNALASTLVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST V++++ ++G + E+ ++ W LFE F
Sbjct: 307 DRYHVMPIITPAYPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGRSDWPKLFEQPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ Y++Y+ + + L W G VES++R L +ER+ + + H P + +
Sbjct: 367 FQKYKHYIVLTASTYTEEHHLEWVGLVESKIRVLVGNLERNEFINI-AHVNPQSFPGNQE 425
Query: 242 PCAHCAF----FMGLQRKPGEVVQEGQQFDIRGSVEEF 275
C + F+G+ + E E + D+ ++ F
Sbjct: 426 HCKQSRYVSMWFLGIIFRKLESA-ESTKIDLTYDIQSF 462
Score = 38 (18.4 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 13/56 (23%), Positives = 22/56 (39%)
Query: 329 NEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVE 384
N Q SGL+ K+ + + S +P SL + + R+ +N E
Sbjct: 512 NISQNASGLRCKRASSNESLNSSRDNHSRTPYNSSSLRSESKNATIWRTNGANNRE 567
>WB|WBGene00011791 [details] [associations]
symbol:T15H9.6 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 EMBL:Z47356 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
PIR:T24943 RefSeq:NP_496067.1 ProteinModelPortal:Q09995 SMR:Q09995
STRING:Q09995 EnsemblMetazoa:T15H9.6 GeneID:174513
KEGG:cel:CELE_T15H9.6 UCSC:T15H9.6 CTD:174513 WormBase:T15H9.6
InParanoid:Q09995 OMA:PFGSYRL NextBio:884348 Uniprot:Q09995
Length = 554
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 119/284 (41%), Positives = 183/284 (64%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++DE +VRSLNGCRVA+Q+LKLVP+ ++FC TLR +K WAK G+YSN GF GG+
Sbjct: 181 SLLKNLDEESVRSLNGCRVAEQLLKLVPHQKNFCITLRAIKLWAKNHGIYSNSMGFFGGI 240
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVML----C-AIDEAELGFSVWDP 116
WA+LVAR+CQLYPNA PS L+ + F +++ W WP PV+L C D A+L VWDP
Sbjct: 241 TWAILVARICQLYPNAAPSRLIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDP 300
Query: 117 RKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF 176
R+N D+ H MPIITPA+P NS++NVS S+++V+ D+ + IC+++ +W L
Sbjct: 301 RRNHADRYHLMPIITPAFPQQNSTHNVSRSSMKVIQDEMKKALIICDKIHEGTLEWRDLL 360
Query: 177 EPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
E FF Y +++ + + A + + LA+ G+ ESR+RQL ++E++ ++ P ++
Sbjct: 361 EEINFFSKYHHFIALKLKAESVKEELAFGGFFESRIRQLVQILEKNQVIQV-AQINPRKF 419
Query: 237 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 280
D P +F+GL E V + D+ +++FK++I+
Sbjct: 420 KDVKDP-KKSIWFIGL-----EFVANVKNVDLTSDIQQFKMNID 457
>UNIPROTKB|Q09995 [details] [associations]
symbol:T15H9.6 "Protein T15H9.6" species:6239
"Caenorhabditis elegans" [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 EMBL:Z47356 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
PIR:T24943 RefSeq:NP_496067.1 ProteinModelPortal:Q09995 SMR:Q09995
STRING:Q09995 EnsemblMetazoa:T15H9.6 GeneID:174513
KEGG:cel:CELE_T15H9.6 UCSC:T15H9.6 CTD:174513 WormBase:T15H9.6
InParanoid:Q09995 OMA:PFGSYRL NextBio:884348 Uniprot:Q09995
Length = 554
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 119/284 (41%), Positives = 183/284 (64%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++DE +VRSLNGCRVA+Q+LKLVP+ ++FC TLR +K WAK G+YSN GF GG+
Sbjct: 181 SLLKNLDEESVRSLNGCRVAEQLLKLVPHQKNFCITLRAIKLWAKNHGIYSNSMGFFGGI 240
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVML----C-AIDEAELGFSVWDP 116
WA+LVAR+CQLYPNA PS L+ + F +++ W WP PV+L C D A+L VWDP
Sbjct: 241 TWAILVARICQLYPNAAPSRLIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDP 300
Query: 117 RKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF 176
R+N D+ H MPIITPA+P NS++NVS S+++V+ D+ + IC+++ +W L
Sbjct: 301 RRNHADRYHLMPIITPAFPQQNSTHNVSRSSMKVIQDEMKKALIICDKIHEGTLEWRDLL 360
Query: 177 EPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
E FF Y +++ + + A + + LA+ G+ ESR+RQL ++E++ ++ P ++
Sbjct: 361 EEINFFSKYHHFIALKLKAESVKEELAFGGFFESRIRQLVQILEKNQVIQV-AQINPRKF 419
Query: 237 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 280
D P +F+GL E V + D+ +++FK++I+
Sbjct: 420 KDVKDP-KKSIWFIGL-----EFVANVKNVDLTSDIQQFKMNID 457
>WB|WBGene00009658 [details] [associations]
symbol:F43G6.5 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
OMA:FPGGVAW HSSP:P25500 EMBL:Z50070 EMBL:AL032651 PIR:C88325
PIR:T22140 RefSeq:NP_496524.1 ProteinModelPortal:G5EBX5 SMR:G5EBX5
EnsemblMetazoa:F43G6.5 GeneID:174816 KEGG:cel:CELE_F43G6.5
CTD:174816 WormBase:F43G6.5 NextBio:885628 Uniprot:G5EBX5
Length = 554
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 118/284 (41%), Positives = 181/284 (63%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D+ +VRSLNGCRVA+ +LKLVPN E+FC TLR +K WAK G+YSN GF GG+
Sbjct: 186 ALLKNLDQESVRSLNGCRVAENLLKLVPNQENFCITLRAIKLWAKNHGIYSNSMGFFGGI 245
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDP 116
WA+LVAR CQLYPNA PS L+ + F +++ W+WP PV+L I D A+L VWDP
Sbjct: 246 TWAILVARACQLYPNASPSKLIQKVFFIFSTWKWPAPVLLDFISSDRMDLAQLNQLVWDP 305
Query: 117 RKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF 176
R+N+ D+ H MPI+TPA+P NS++NVS S+++V+ ++ + C+ ++ W L
Sbjct: 306 RRNQSDRYHLMPIVTPAFPQQNSTHNVSRSSMKVIQEEMKDALITCDNIQNGSCNWMDLL 365
Query: 177 EPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
E FF Y++++ + + A D LA+ G+ ESR+RQL L++E++ KL H P ++
Sbjct: 366 EEINFFSRYKHFISLSMTAETEKDELAFGGFFESRIRQLVLILEKNQGIKL-AHINPKKF 424
Query: 237 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 280
P +F+GLQ + + D+ +++FK +I+
Sbjct: 425 KAAKDP-KKSVWFIGLQFD-----ENVKNLDLTKDIQQFKRNID 462
>GENEDB_PFALCIPARUM|PFF1240w [details] [associations]
symbol:PFF1240w "poly(A) polymerase PAP,
putative" species:5833 "Plasmodium falciparum" [GO:0006378 "mRNA
polyadenylation" evidence=ISS] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 EMBL:AL844505 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376
ProtClustDB:PTZ00418 RefSeq:XP_966239.1 ProteinModelPortal:C6KT92
EnsemblProtists:PFF1240w:mRNA GeneID:3885690 KEGG:pfa:PFF1240w
EuPathDB:PlasmoDB:PF3D7_0625600 OMA:MEDENNI Uniprot:C6KT92
Length = 631
Score = 489 (177.2 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 88/168 (52%), Positives = 123/168 (73%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++DE TVRSLNG RVAD IL VPN ++F TLR +K WAK RG+YSN+ GFLGG++
Sbjct: 252 ILKNLDEVTVRSLNGIRVADLILNSVPNKDYFRNTLRFIKLWAKSRGIYSNILGFLGGIS 311
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAEL----GFSVWDPRK 118
WALL A++CQLYPN S L+ +FF+VY++W W PV+L I + + F VWDP K
Sbjct: 312 WALLTAKICQLYPNFNVSQLICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEK 371
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVE 166
N +DK H MPIITPA+PCMNS++NV+ T +++++F+ ++I + +E
Sbjct: 372 NIKDKLHIMPIITPAFPCMNSTHNVTYCTRNILIEEFKRAHSIIQYME 419
Score = 139 (54.0 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 44/205 (21%), Positives = 91/205 (44%)
Query: 137 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 196
M N+ +S + M++ N + + W + EP F +Y+++L + I+
Sbjct: 418 MEDENNIKSS---IRMNKLWPNNNVNNINNSSNNVWMTILEPLDLFSTYKHFLHIQIMGI 474
Query: 197 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCA-FFMGL--- 252
N +WKGW+ES++R L +E T +L+ P+P Y + +C+ FF+ L
Sbjct: 475 NEFIYNSWKGWIESKIRLLFKKLE--TINELKIRPFPKFYFYKKEKSYYCSSFFIALIFF 532
Query: 253 QRKPGEVVQEGQQFDIRGSVEEF-KLSINMYMFWK-PG-MEICVSHIRRKQIPPYVFPEG 309
+ P E F++ ++ +F +++N K P +I + + +R Q+ ++
Sbjct: 533 YKNPYE-----NTFNLSYAIRDFIDIALNWPQKVKYPNAFKINIMYQKRSQVLEFLDIVT 587
Query: 310 YKRTRHPRLASQQRSSENGNEYQTG 334
+ + + + + N Q G
Sbjct: 588 KEENQKNKQVMENNDKDETNHNQNG 612
>UNIPROTKB|C6KT92 [details] [associations]
symbol:PFF1240w "Poly(A) polymerase PAP, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=ISS;IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 EMBL:AL844505 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376
ProtClustDB:PTZ00418 RefSeq:XP_966239.1 ProteinModelPortal:C6KT92
EnsemblProtists:PFF1240w:mRNA GeneID:3885690 KEGG:pfa:PFF1240w
EuPathDB:PlasmoDB:PF3D7_0625600 OMA:MEDENNI Uniprot:C6KT92
Length = 631
Score = 489 (177.2 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 88/168 (52%), Positives = 123/168 (73%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++DE TVRSLNG RVAD IL VPN ++F TLR +K WAK RG+YSN+ GFLGG++
Sbjct: 252 ILKNLDEVTVRSLNGIRVADLILNSVPNKDYFRNTLRFIKLWAKSRGIYSNILGFLGGIS 311
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAEL----GFSVWDPRK 118
WALL A++CQLYPN S L+ +FF+VY++W W PV+L I + + F VWDP K
Sbjct: 312 WALLTAKICQLYPNFNVSQLICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEK 371
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVE 166
N +DK H MPIITPA+PCMNS++NV+ T +++++F+ ++I + +E
Sbjct: 372 NIKDKLHIMPIITPAFPCMNSTHNVTYCTRNILIEEFKRAHSIIQYME 419
Score = 139 (54.0 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 44/205 (21%), Positives = 91/205 (44%)
Query: 137 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 196
M N+ +S + M++ N + + W + EP F +Y+++L + I+
Sbjct: 418 MEDENNIKSS---IRMNKLWPNNNVNNINNSSNNVWMTILEPLDLFSTYKHFLHIQIMGI 474
Query: 197 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCA-FFMGL--- 252
N +WKGW+ES++R L +E T +L+ P+P Y + +C+ FF+ L
Sbjct: 475 NEFIYNSWKGWIESKIRLLFKKLE--TINELKIRPFPKFYFYKKEKSYYCSSFFIALIFF 532
Query: 253 QRKPGEVVQEGQQFDIRGSVEEF-KLSINMYMFWK-PG-MEICVSHIRRKQIPPYVFPEG 309
+ P E F++ ++ +F +++N K P +I + + +R Q+ ++
Sbjct: 533 YKNPYE-----NTFNLSYAIRDFIDIALNWPQKVKYPNAFKINIMYQKRSQVLEFLDIVT 587
Query: 310 YKRTRHPRLASQQRSSENGNEYQTG 334
+ + + + + N Q G
Sbjct: 588 KEENQKNKQVMENNDKDETNHNQNG 612
>WB|WBGene00012528 [details] [associations]
symbol:pap-1 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0007276 "gamete generation" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0006378
GO:GO:0010171 GO:GO:0040011 GO:GO:0048477 GO:GO:0006351
GO:GO:0003723 GO:GO:0040035 GO:GO:0040027 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
EMBL:AL021474 PIR:G89189 RefSeq:NP_505683.1
ProteinModelPortal:Q9U2P3 SMR:Q9U2P3 STRING:Q9U2P3 PaxDb:Q9U2P3
EnsemblMetazoa:Y32F6A.3.1 EnsemblMetazoa:Y32F6A.3.2 GeneID:179458
KEGG:cel:CELE_Y32F6A.3 UCSC:Y32F6A.3 CTD:179458 WormBase:Y32F6A.3
InParanoid:Q9U2P3 OMA:CEALEIC NextBio:905480 Uniprot:Q9U2P3
Length = 655
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 117/292 (40%), Positives = 179/292 (61%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D+ +VRSLNGCRVA+Q+LKLVP + FC TLR +K WAK G+YSN GF GG+
Sbjct: 179 NLLRNLDQESVRSLNGCRVAEQLLKLVPRQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGI 238
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDP 116
WA+LVAR CQLYPNA PS LV R F +++ W WP+PV+L + D L VWDP
Sbjct: 239 TWAILVARACQLYPNASPSRLVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDP 298
Query: 117 RKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF 176
R+ D+ H MPIITPA+P NS++NV+ ST V+ ++ IC ++ K++W+ALF
Sbjct: 299 RRKNTDRFHVMPIITPAFPEQNSTHNVTRSTATVIKNEICEALEICRDISEGKSKWTALF 358
Query: 177 EPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
E FF Y++++ + + A N ++ L + G++ESR+R L +ER+ + H P+++
Sbjct: 359 EEVNFFSRYKHFIALIMAAPNEEEELNYGGFLESRIRLLVQSLERNQ-DIIIAHNDPNKH 417
Query: 237 VDTSKPCAHCAFFMGLQRKP------G-EVVQEGQQFDIRGSVEEFKLSINM 281
KP + F + + K G E + + D+ ++ FK ++ +
Sbjct: 418 ----KPSPNAKFDVNPENKRVTVWFIGLEFAEHAKTLDLTNEIQRFKTNVEL 465
>UNIPROTKB|Q9U2P3 [details] [associations]
symbol:pap-1 "Protein PAP-1" species:6239 "Caenorhabditis
elegans" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
GO:GO:0040007 GO:GO:0040010 GO:GO:0006915 GO:GO:0002119
GO:GO:0006378 GO:GO:0010171 GO:GO:0040011 GO:GO:0048477
GO:GO:0006351 GO:GO:0003723 GO:GO:0040035 GO:GO:0040027
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HSSP:P25500 EMBL:AL021474 PIR:G89189 RefSeq:NP_505683.1
ProteinModelPortal:Q9U2P3 SMR:Q9U2P3 STRING:Q9U2P3 PaxDb:Q9U2P3
EnsemblMetazoa:Y32F6A.3.1 EnsemblMetazoa:Y32F6A.3.2 GeneID:179458
KEGG:cel:CELE_Y32F6A.3 UCSC:Y32F6A.3 CTD:179458 WormBase:Y32F6A.3
InParanoid:Q9U2P3 OMA:CEALEIC NextBio:905480 Uniprot:Q9U2P3
Length = 655
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 117/292 (40%), Positives = 179/292 (61%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D+ +VRSLNGCRVA+Q+LKLVP + FC TLR +K WAK G+YSN GF GG+
Sbjct: 179 NLLRNLDQESVRSLNGCRVAEQLLKLVPRQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGI 238
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDP 116
WA+LVAR CQLYPNA PS LV R F +++ W WP+PV+L + D L VWDP
Sbjct: 239 TWAILVARACQLYPNASPSRLVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDP 298
Query: 117 RKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF 176
R+ D+ H MPIITPA+P NS++NV+ ST V+ ++ IC ++ K++W+ALF
Sbjct: 299 RRKNTDRFHVMPIITPAFPEQNSTHNVTRSTATVIKNEICEALEICRDISEGKSKWTALF 358
Query: 177 EPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
E FF Y++++ + + A N ++ L + G++ESR+R L +ER+ + H P+++
Sbjct: 359 EEVNFFSRYKHFIALIMAAPNEEEELNYGGFLESRIRLLVQSLERNQ-DIIIAHNDPNKH 417
Query: 237 VDTSKPCAHCAFFMGLQRKP------G-EVVQEGQQFDIRGSVEEFKLSINM 281
KP + F + + K G E + + D+ ++ FK ++ +
Sbjct: 418 ----KPSPNAKFDVNPENKRVTVWFIGLEFAEHAKTLDLTNEIQRFKTNVEL 465
>POMBASE|SPBC646.04 [details] [associations]
symbol:pla1 "poly(A) polymerase Pla1" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IGI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IGI] [GO:0006378 "mRNA polyadenylation"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 PomBase:SPBC646.04 GO:GO:0005829
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0006378
GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0005847
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 OMA:FPGGVAW EMBL:X79705
EMBL:AB027883 PIR:JC6058 RefSeq:NP_595362.1
ProteinModelPortal:Q10295 SMR:Q10295 MINT:MINT-2730388
STRING:Q10295 EnsemblFungi:SPBC646.04.1 GeneID:2541099
KEGG:spo:SPBC646.04 OrthoDB:EOG4SR150 NextBio:20802212
Uniprot:Q10295
Length = 566
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 101/219 (46%), Positives = 145/219 (66%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L V+E V SLNG RV DQIL+LVPN F LR +KFWA+RR +Y+NV GF GGV
Sbjct: 174 NLLKGVEERCVLSLNGTRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA++VAR+CQLYPNAV S++V++FFR+ W WP P++L I++ L +W+P+
Sbjct: 234 AWAMMVARICQLYPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPS 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
DK H MPIITPAYP M +++N++ ST +++ + I +++ + WSALF+ + F
Sbjct: 294 DKAHRMPIITPAYPSMCATHNITLSTQTIILREMVRAGEIADQIMVKALPWSALFQKHDF 353
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE 220
F Y++YL + A A+ L W G VES+LR L +E
Sbjct: 354 FHRYKHYLTITAAAKTAEAQLKWAGLVESKLRHLVTRLE 392
>CGD|CAL0002451 [details] [associations]
symbol:PAP1 species:5476 "Candida albicans" [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISS;IDA]
[GO:0044011 "single-species biofilm formation on inanimate
substrate" evidence=IMP] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=IDA] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=IEA] [GO:0071050 "snoRNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 CGD:CAL0002451 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 EMBL:AACQ01000100 GO:GO:0044011 GO:GO:0004652
KO:K14376 EMBL:AF167162 EMBL:AB021667 RefSeq:XP_714613.1
ProteinModelPortal:Q9UW26 STRING:Q9UW26 GeneID:3643763
KEGG:cal:CaO19.3197 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 Uniprot:Q9UW26
Length = 555
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 106/234 (45%), Positives = 152/234 (64%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LRC+K WA++R VY N+ GF GGV
Sbjct: 174 NLLKNIDEKDLRALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV +++V +FF +Y+ W WP PV+L I++ L VW+PR
Sbjct: 234 AWAMLVARICQLYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYAL 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N+++ST +V++ +FQ G + ++ + K WS L E + F
Sbjct: 294 DRQHRMPVITPAYPSMCATHNITSSTQKVILSEFQRGIELMNDINVGKKSWSDLLERHDF 353
Query: 182 FESYRNYLQVDIVAANAD---DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F Y+ YL IVAA + L + G VES+LR L +E G HPY
Sbjct: 354 FFRYKFYLC--IVAATRSTYAEHLKYSGMVESKLRLLVQKLEL-VEGIELAHPY 404
>UNIPROTKB|Q9UW26 [details] [associations]
symbol:PAPA "Poly(A) polymerase PAPa" species:237561
"Candida albicans SC5314" [GO:0003723 "RNA binding" evidence=IDA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IDA] [GO:0006378 "mRNA polyadenylation" evidence=IDA]
[GO:0044011 "single-species biofilm formation on inanimate
substrate" evidence=IMP] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
CGD:CAL0002451 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 EMBL:AACQ01000100
GO:GO:0044011 GO:GO:0004652 KO:K14376 EMBL:AF167162 EMBL:AB021667
RefSeq:XP_714613.1 ProteinModelPortal:Q9UW26 STRING:Q9UW26
GeneID:3643763 KEGG:cal:CaO19.3197 eggNOG:COG5186
Gene3D:3.30.70.590 SUPFAM:SSF55003 Uniprot:Q9UW26
Length = 555
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 106/234 (45%), Positives = 152/234 (64%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LRC+K WA++R VY N+ GF GGV
Sbjct: 174 NLLKNIDEKDLRALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV +++V +FF +Y+ W WP PV+L I++ L VW+PR
Sbjct: 234 AWAMLVARICQLYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYAL 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N+++ST +V++ +FQ G + ++ + K WS L E + F
Sbjct: 294 DRQHRMPVITPAYPSMCATHNITSSTQKVILSEFQRGIELMNDINVGKKSWSDLLERHDF 353
Query: 182 FESYRNYLQVDIVAANAD---DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F Y+ YL IVAA + L + G VES+LR L +E G HPY
Sbjct: 354 FFRYKFYLC--IVAATRSTYAEHLKYSGMVESKLRLLVQKLEL-VEGIELAHPY 404
>SGD|S000001710 [details] [associations]
symbol:PAP1 "Poly(A) polymerase, one of three factors
required for mRNA 3'-end pol" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA;IDA] [GO:0006378 "mRNA polyadenylation"
evidence=IDA;IMP] [GO:0005654 "nucleoplasm" evidence=IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071050 "snoRNA polyadenylation"
evidence=IGI] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 SGD:S000001710 GO:GO:0005524
GO:GO:0000287 GO:GO:0006378 GO:GO:0006351 EMBL:BK006944
GO:GO:0003723 GO:GO:0005847 GO:GO:0004652 EMBL:X65124
RefSeq:NP_012929.4 GeneID:853873 KEGG:sce:YKR004C PDB:3C66
PDBsum:3C66 RefSeq:NP_012927.3 GeneID:853871 KEGG:sce:YKR002W
KO:K14376 GO:GO:0071050 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
OMA:FPGGVAW OrthoDB:EOG4SR150 EMBL:X60307 EMBL:Z28227 PIR:S19031
PDB:1FA0 PDB:2HHP PDB:2O1P PDB:2Q66 PDBsum:1FA0 PDBsum:2HHP
PDBsum:2O1P PDBsum:2Q66 ProteinModelPortal:P29468 SMR:P29468
DIP:DIP-2297N IntAct:P29468 MINT:MINT-375429 STRING:P29468
PaxDb:P29468 PeptideAtlas:P29468 EnsemblFungi:YKR002W CYGD:YKR002w
EvolutionaryTrace:P29468 NextBio:975142 Genevestigator:P29468
GermOnline:YKR002W Uniprot:P29468
Length = 568
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 102/243 (41%), Positives = 158/243 (65%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LR +K WA+RR VY+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA +++++RFF + + W WP PV+L I++ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MP+ITPAYP M +++N++ ST +V++ +F G I ++ NK W+ LFE F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDF 354
Query: 182 FESYRNYLQVDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
F Y+ YL++ +D+ L W G VES++R L + +E K+ HP+ + ++S
Sbjct: 355 FFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF-ESS 412
Query: 241 KPC 243
C
Sbjct: 413 YCC 415
>RGD|1308673 [details] [associations]
symbol:Papola "poly (A) polymerase alpha" species:10116 "Rattus
norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISO;IBA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IBA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0043631 "RNA polyadenylation" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1308673 GO:GO:0005634 GO:GO:0005737
GO:GO:0006378 GO:GO:0003723 GO:GO:0000398 GO:GO:0006369
GO:GO:0004652 Gene3D:3.30.70.590 SUPFAM:SSF55003 IPI:IPI00567428
Ensembl:ENSRNOT00000047832 UCSC:RGD:1308673 ArrayExpress:F1MAC5
Uniprot:F1MAC5
Length = 681
Score = 397 (144.8 bits), Expect = 5.1e-45, Sum P(2) = 5.1e-45
Identities = 69/116 (59%), Positives = 88/116 (75%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV
Sbjct: 188 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGV 247
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 117
+WA+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR
Sbjct: 248 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
Score = 105 (42.0 bits), Expect = 5.1e-45, Sum P(2) = 5.1e-45
Identities = 65/237 (27%), Positives = 101/237 (42%)
Query: 163 EEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD-DLLAWKGWVESRLRQLTLMIER 221
EE LN W LFF + +Q+ + +A + L W G VES++R L +E+
Sbjct: 291 EECNLNLPVWDPRVS-VLFFPLQIHTVQLLLASAPTEKQRLEWVGLVESKIRILVGSLEK 349
Query: 222 DTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF- 275
+ + L Q P P E D + + +GL K E E D+ ++ F
Sbjct: 350 NEFITLAHVNPQSFPAPKESPDREE--FRTMWVIGLVFKKTEN-SENLSVDLTYDIQSFT 406
Query: 276 ----KLSINMYMFWKPGMEICVSHIRRKQI----PPYVFPEGYKR-TRHPRLASQQRSSE 326
+ +IN MF + M+I H++RKQ+ P +V + K T +LA+ SS
Sbjct: 407 DTVYRQAINSKMF-ELDMKIAAMHVKRKQLHQLLPSHVLQKRKKHSTEGVKLAALNDSSL 465
Query: 327 NGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNV 383
+ + S P S + P S S Q ++S +P A +SV S S V
Sbjct: 466 DLSMDSDNS--MSVPSPTSAMKTSP-LNSSGSSQGRNSPAPAVTA-ASVTSIQASEV 518
>UNIPROTKB|G3V2A0 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
Pfam:PF04926 Pfam:PF04928 GO:GO:0005634 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 GO:GO:0043631 EMBL:AL163051 Gene3D:3.30.70.590
SUPFAM:SSF55003 HGNC:HGNC:14981 ChiTaRS:PAPOLA
ProteinModelPortal:G3V2A0 SMR:G3V2A0 Ensembl:ENST00000555626
ArrayExpress:G3V2A0 Bgee:G3V2A0 Uniprot:G3V2A0
Length = 475
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 121/351 (34%), Positives = 179/351 (50%)
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 125 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 184
H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQK 120
Query: 185 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDT 239
Y++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 121 YKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDK 180
Query: 240 SKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVS 294
+ + +GL K E E D+ ++ F + +IN MF + M+I
Sbjct: 181 EE--FRTMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAM 236
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQT--GSGLKRKKDPE-SVDQDGP 351
H++RKQ+ + P H L +++ S G + S L D + S+ P
Sbjct: 237 HVKRKQLHQ-LLPN------HV-LQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSP 288
Query: 352 EKRQSISPQKQDSLSPDHLAPS-SVRSGTGSNVEPVIPDKRVLNQEIAEGG 401
SP S +P+ +V + + +N++ +N + GG
Sbjct: 289 TSATKTSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQVNSSESSGG 339
>TAIR|locus:2084274 [details] [associations]
symbol:PAPS3 "poly(A) polymerase 3" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA;ISS] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=RCA] InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0005737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 EMBL:AK221644 IPI:IPI00518099 RefSeq:NP_187308.3
UniGene:At.40500 ProteinModelPortal:Q56XM9 SMR:Q56XM9 IntAct:Q56XM9
STRING:Q56XM9 EnsemblPlants:AT3G06560.1 GeneID:819835
KEGG:ath:AT3G06560 TAIR:At3g06560 HOGENOM:HOG000006246
InParanoid:Q56XM9 OMA:IDETSWK PhylomeDB:Q56XM9
ProtClustDB:CLSN2699159 Genevestigator:Q56XM9 Uniprot:Q56XM9
Length = 507
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 97/251 (38%), Positives = 140/251 (55%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L D+DE + + L+G R IL+LVP++E F + LRC+K WAKRRGVY N+ GFLGGV+
Sbjct: 170 LRDIDETSWKILSGVRANKCILQLVPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHM 229
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+L A VC PNA S L++ FF + W+WP PV+L G P
Sbjct: 230 AILAAFVCGYQPNATLSSLLANFFYTFAHWQWPTPVVLLEDTYPSTGAP---PGL----- 281
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE-VELNKAQWSALFEPYLFF 182
MPI P + ++ ST ++ +F G+ + ++ ++LN + W LFE Y +
Sbjct: 282 ---MPIQLPCGSHQYCNSTITRSTFYKIVAEFLLGHNLTKDYLKLNFS-WKDLFELYPYA 337
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 242
+Y + ++ + AAN +DL W GWV+SR R L + IE + YG C P P EYV+T
Sbjct: 338 NTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLIKIE-EVYGI--CDPNPTEYVETYTK 394
Query: 243 CAHCAFFMGLQ 253
+ F+ GLQ
Sbjct: 395 QPNIVFYWGLQ 405
>UNIPROTKB|H0YJ00 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR007012 Pfam:PF04928 GO:GO:0006351 GO:GO:0004652
EMBL:AL163051 HGNC:HGNC:14981 ChiTaRS:PAPOLA
Ensembl:ENST00000553461 Uniprot:H0YJ00
Length = 203
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 69/116 (59%), Positives = 88/116 (75%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV
Sbjct: 74 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGV 133
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 117
+WA+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR
Sbjct: 134 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 189
>UNIPROTKB|D4A764 [details] [associations]
symbol:Papola "Protein Papola" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1308673 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 Gene3D:3.30.70.590
SUPFAM:SSF55003 IPI:IPI00776821 Ensembl:ENSRNOT00000057215
ArrayExpress:D4A764 Uniprot:D4A764
Length = 657
Score = 320 (117.7 bits), Expect = 1.9e-32, Sum P(2) = 1.9e-32
Identities = 56/92 (60%), Positives = 73/92 (79%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV
Sbjct: 188 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGV 247
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMW 93
+WA+LVAR CQLYPNA+ S LV +FF V++ W
Sbjct: 248 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 279
Score = 93 (37.8 bits), Expect = 1.9e-32, Sum P(2) = 1.9e-32
Identities = 61/228 (26%), Positives = 97/228 (42%)
Query: 175 LFEPYLFFESYRNYLQV-DIVAANAD---DLLAWKGWVESRLRQLTLMIERDTYGKL--- 227
+F + F Y N + ++ A+A L W G VES++R L +E++ + L
Sbjct: 275 VFSKWYVFRLYYNKIDCRHVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHV 334
Query: 228 --QCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSIN 280
Q P P E D + + +GL K E E D+ ++ F + +IN
Sbjct: 335 NPQSFPAPKESPDREE--FRTMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAIN 391
Query: 281 MYMFWKPGMEICVSHIRRKQI----PPYVFPEGYKR-TRHPRLASQQRSSENGNEYQTGS 335
MF + M+I H++RKQ+ P +V + K T +LA+ SS + + S
Sbjct: 392 SKMF-ELDMKIAAMHVKRKQLHQLLPSHVLQKRKKHSTEGVKLAALNDSSLDLSMDSDNS 450
Query: 336 GLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNV 383
P S + P S S Q ++S +P A +SV S S V
Sbjct: 451 --MSVPSPTSAMKTSP-LNSSGSSQGRNSPAPAVTA-ASVTSIQASEV 494
>UNIPROTKB|F8WAT4 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007012 Pfam:PF01909 Pfam:PF04928
GO:GO:0006351 GO:GO:0004652 HGNC:HGNC:14982 EMBL:AC011245
EMBL:AC012498 IPI:IPI00893537 ProteinModelPortal:F8WAT4 SMR:F8WAT4
Ensembl:ENST00000414060 ArrayExpress:F8WAT4 Bgee:F8WAT4
Uniprot:F8WAT4
Length = 234
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 59/92 (64%), Positives = 70/92 (76%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 143 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 202
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMW 93
+WA+LVAR CQLYPNA S LV +FF V++ W
Sbjct: 203 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKW 234
>UNIPROTKB|F1PYB9 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR007010 InterPro:IPR011068
Pfam:PF04926 GO:GO:0005634 GO:GO:0006378 GO:GO:0003723
GO:GO:0004652 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 EMBL:AAEX03007549
Ensembl:ENSCAFT00000004771 Uniprot:F1PYB9
Length = 384
Score = 199 (75.1 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 65/248 (26%), Positives = 115/248 (46%)
Query: 150 VMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVE 209
VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++ L W G VE
Sbjct: 3 VMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVE 62
Query: 210 SRLRQLTLMIERDTYGKLQCHPYPHEYVDTS---KPCAHCA-FFMGL--QR-KPGEVVQE 262
S++R L +ER+ + L H P + K + + +F+G+ +R + E V
Sbjct: 63 SKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRVENAESVNI 121
Query: 263 GQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ 322
+DI+ + N K GM+I +H+++KQ+ Y+ E ++ + L+
Sbjct: 122 DLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVS 181
Query: 323 RSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSN 382
RSS +G + + S D +G +S K PD L PS +
Sbjct: 182 RSS-SGPQSKRSSLDSNCLDSSRDTDNGTPFNSPVSINKPSK--PD-LPPSGETERNNAE 237
Query: 383 VEPVIPDK 390
V+ +K
Sbjct: 238 PTAVVVEK 245
>UNIPROTKB|Q59G05 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma variant"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR007010
InterPro:IPR011068 Pfam:PF04926 GO:GO:0005634 GO:GO:0003723
GO:GO:0004652 GO:GO:0043631 KO:K14376 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 HOVERGEN:HBG053502
RefSeq:NP_075045.2 UniGene:Hs.387471 GeneID:64895 KEGG:hsa:64895
CTD:64895 HGNC:HGNC:14982 GenomeRNAi:64895 NextBio:67037
EMBL:AC011245 EMBL:AC012498 EMBL:AB209304 IPI:IPI00555821
ProteinModelPortal:Q59G05 SMR:Q59G05 STRING:Q59G05 PRIDE:Q59G05
Ensembl:ENST00000412217 ArrayExpress:Q59G05 Bgee:Q59G05
Uniprot:Q59G05
Length = 382
Score = 193 (73.0 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 67/258 (25%), Positives = 123/258 (47%)
Query: 150 VMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVE 209
VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++ L W G VE
Sbjct: 3 VMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVE 62
Query: 210 SRLRQLTLMIERDTYGKLQCHPYPHEYVDTS---KPCAHCA-FFMGL--QR-KPGEVVQE 262
S++R L +ER+ + L H P + K + + +F+G+ +R + E V
Sbjct: 63 SKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRVENAESVNI 121
Query: 263 GQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ 322
+DI+ + N K GM+I +H+++KQ+ Y+ E ++ + L+
Sbjct: 122 DLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVN 181
Query: 323 RSS---ENGNEYQTGSGLKRKKDPES-VDQDGPEKRQ---SISPQKQDSLSPDHLA---P 372
RSS ++ S L +D ++ + P + S+ +++S P + P
Sbjct: 182 RSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETERNSAEPAAVIVEKP 241
Query: 373 SSVRSGTGSNVEPVIPDK 390
SV G ++ PVI K
Sbjct: 242 LSVPPAQGLSI-PVIGAK 258
>UNIPROTKB|G4N5I8 [details] [associations]
symbol:MGG_06121 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR009097 InterPro:IPR011068 Pfam:PF04926 Pfam:PF04928
Pfam:PF03372 GO:GO:0005634 EMBL:CM001233 GO:GO:0006351
GO:GO:0003723 SUPFAM:SSF55144 InterPro:IPR005135 SUPFAM:SSF56219
GO:GO:0004652 GO:GO:0043631 SUPFAM:SSF55003 RefSeq:XP_003711988.1
ProteinModelPortal:G4N5I8 EnsemblFungi:MGG_06121T0 GeneID:2684277
KEGG:mgr:MGG_06121 InterPro:IPR007547 Pfam:PF04457 Uniprot:G4N5I8
Length = 1238
Score = 152 (58.6 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 55/251 (21%), Positives = 108/251 (43%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
T+ L R D + + +P++ F R +K WA+ RG+YS G+LGG+ ++L+ARV
Sbjct: 769 TLGKLKALRDLDYLRETIPDLSKFRLAHRAIKTWAQSRGIYSAKFGYLGGIQVSILLARV 828
Query: 71 CQLYPN------AVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
C+L +VP +L S FF Y + W N + +L + ++ R+
Sbjct: 829 CKLLARDYGQEVSVPDIL-SSFFSHYASFDWRNKIAFDPFFHKKLNYL-----RSAREPL 882
Query: 125 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL---- 180
+ PA +N++ + +++ + + N + E + W F
Sbjct: 883 AILGFFPPA---LNTTLAATVPSMKAIARELSQANELLNEDGMT---WDTFFGASSAGGD 936
Query: 181 -----------FFESYRNYLQVDIV--AANADDLLAWKGWVESRLRQLTLMIERDTYGKL 227
F SY++++++++ + + GW+ESR L + + R +L
Sbjct: 937 KTHSLARGAADFLSSYKSFVKIELQYWGISLSKGSQFIGWLESRCPLLLVDMSR-RLPQL 995
Query: 228 QCHPYPHEYVD 238
+P +V+
Sbjct: 996 NFRIWPQRFVE 1006
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 514 461 0.00096 118 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 50
No. of states in DFA: 624 (66 KB)
Total size of DFA: 318 KB (2162 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.68u 0.11s 38.79t Elapsed: 00:00:02
Total cpu time: 38.69u 0.11s 38.80t Elapsed: 00:00:02
Start: Tue May 21 09:39:03 2013 End: Tue May 21 09:39:05 2013