BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010265
(514 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255549812|ref|XP_002515957.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544862|gb|EEF46377.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 712
Score = 774 bits (1999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/521 (72%), Positives = 428/521 (82%), Gaps = 17/521 (3%)
Query: 1 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
+SVL DVDEPTVRSLNGCRVADQILKLVPNVEHF TTLRCLKFWAKRRGVYSNVTGFLGG
Sbjct: 149 VSVLYDVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGG 208
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNR 120
VNWALLVAR+CQLYPNA+PSMLVSRFFRVYT WRWPNPVMLC I+E ELGFS+WDPRKN
Sbjct: 209 VNWALLVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSIWDPRKNP 268
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
RD+THHMPIITPAYPCMNSSYNVSTSTLRVMM+QFQYGN ICEE+EL K QW+ LFEPYL
Sbjct: 269 RDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQYGNKICEEIELIKTQWATLFEPYL 328
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
FFESY+NYLQVDIVA + DDL AWKGWVESRLRQLTLMI+RDTYGKLQCHPYPHEYVDTS
Sbjct: 329 FFESYKNYLQVDIVATDVDDLRAWKGWVESRLRQLTLMIDRDTYGKLQCHPYPHEYVDTS 388
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 300
KPCAHCAFFMGLQRK GE++QEGQQFDIRG+V+EF+ SINMYMFWKPGMEI VSH+RRKQ
Sbjct: 389 KPCAHCAFFMGLQRKQGEMIQEGQQFDIRGTVDEFRNSINMYMFWKPGMEIYVSHVRRKQ 448
Query: 301 IPPYVFPEGYKRTRHPRLASQQRSSE----NGNEYQTGS---GLKRKKDPESVD--QDGP 351
IP YVFP+GY+R RHPR+ +QQ+S + + + Y GS G KRKKD + +D D P
Sbjct: 449 IPSYVFPDGYRRARHPRVTAQQQSDKTCCGDSDAYGNGSSERGHKRKKDSDEIDVKNDMP 508
Query: 352 EKRQSISPQKQDSLSPDHL-----APSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNS 406
EKR SISPQ++DS+SPD PSS S + DKR + +G SNS
Sbjct: 509 EKRNSISPQRRDSVSPDIFTHKFGGPSSECSAIAEGKGTLQLDKRTFCPDDVDGVCTSNS 568
Query: 407 SVITSVTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLD 466
S ITS++SE+ SCED+G ESVAGSSEGNNGS EGSNN VSSQSD DA+S+SLLEN + D
Sbjct: 569 SGITSLSSEIVSCEDIGTESVAGSSEGNNGSAEGSNNLVSSQSDSGDAESESLLENAYAD 628
Query: 467 GNGAFQDRVHEELELNAGLGSVLQSTSGIDSETVVQKPVMR 507
G G QD + EELE NA + + T G+ +E +QKPV+R
Sbjct: 629 G-GVLQDGLQEELEPNAAV-EMAPDTLGVSAEA-LQKPVIR 666
>gi|297743180|emb|CBI36047.3| unnamed protein product [Vitis vinifera]
Length = 677
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/514 (72%), Positives = 415/514 (80%), Gaps = 23/514 (4%)
Query: 1 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
+SVL ++DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG
Sbjct: 187 LSVLYNIDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 246
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNR 120
VNWALLVARVCQLYPNAVPSMLVSRFFRVYT WRWPNPVMLCAI+E ELGFSVWDPRKN
Sbjct: 247 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNP 306
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
RD+THHMPIITPAYPCMNSSYNVS STLRVMM+QFQYGN ICE +EL+ AQW ALFEPYL
Sbjct: 307 RDRTHHMPIITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNAQWGALFEPYL 366
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
FFESY+NYLQVDIVA + DDL AWKGWVESRLRQLTLMIERDT+GKLQCHPYPHEYVDTS
Sbjct: 367 FFESYKNYLQVDIVAVDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTS 426
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 300
K C+HCAFFMGLQRK GE++QEGQQFDIRG+V+EF+ SINMYMFWKPGMEI VSH+RRKQ
Sbjct: 427 KQCSHCAFFMGLQRKQGEIIQEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQ 486
Query: 301 IPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQ 360
IP YVFPEGYKR+R R +QQ+ E KR +ISPQ
Sbjct: 487 IPSYVFPEGYKRSRPQRPVNQQQGDE-----------------------ASAKRLTISPQ 523
Query: 361 KQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEVGSCE 420
+QDS+SP+ ++ +++ N+EP DK + AE G VSNSSV+TS+TSEV S
Sbjct: 524 RQDSVSPEIISHRWMKADEKGNIEPDKSDKPIPCTGNAEAGSVSNSSVVTSITSEVSSSG 583
Query: 421 DVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELE 480
DVG ESV GSS+GN GSVEGSN SQ D C+ADS+ LLEN ++ FQD +HEELE
Sbjct: 584 DVGFESVGGSSDGNTGSVEGSNILGISQGDSCEADSELLLENGCVNAKEGFQDGLHEELE 643
Query: 481 LNAGLGSVLQSTSGIDSETVVQKPVMRLSLTSTA 514
NA LG VL+S G+DSE V + + RLSLTSTA
Sbjct: 644 PNAALGIVLKSRGGVDSEPVPKSVLSRLSLTSTA 677
>gi|225442450|ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 770
Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/563 (65%), Positives = 416/563 (73%), Gaps = 57/563 (10%)
Query: 1 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
+SVL ++DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG
Sbjct: 187 LSVLYNIDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 246
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNR 120
VNWALLVARVCQLYPNAVPSMLVSRFFRVYT WRWPNPVMLCAI+E ELGFSVWDPRKN
Sbjct: 247 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNP 306
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
RD+THHMPIITPAYPCMNSSYNVS STLRVMM+QFQYGN ICE +EL+ AQW ALFEPYL
Sbjct: 307 RDRTHHMPIITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNAQWGALFEPYL 366
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
FFESY+NYLQVDIVA + DDL AWKGWVESRLRQLTLMIERDT+GKLQCHPYPHEYVDTS
Sbjct: 367 FFESYKNYLQVDIVAVDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTS 426
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 300
K C+HCAFFMGLQRK GE++QEGQQFDIRG+V+EF+ SINMYMFWKPGMEI VSH+RRKQ
Sbjct: 427 KQCSHCAFFMGLQRKQGEIIQEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQ 486
Query: 301 IPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVD--QDGPEKRQSIS 358
IP YVFPEGYKR+R R +QQ+ E + +KRKKDPE VD QD KR +IS
Sbjct: 487 IPSYVFPEGYKRSRPQRPVNQQQGDEACRTGSSEKHMKRKKDPEEVDVEQDKAAKRLTIS 546
Query: 359 PQKQDSLSPDHLA-------PSSVRSGTGSNVEPVIPDKR---------------VLNQE 396
PQ+QDS+SP+ ++ SG+ E V D++ V N E
Sbjct: 547 PQRQDSVSPEIISHRFSSSSQECSASGSAKAKEIVEGDRKCQVGMGKLEDLVSTNVENIE 606
Query: 397 IAEGG----------------DVSNSSVITSVTSEVG----------------SCEDVGN 424
+ G D S+ + + +E G S DVG
Sbjct: 607 MGAIGRGMRWMKADEKGNIEPDKSDKPIPCTGNAEAGSVSNSSVVTSITSEVSSSGDVGF 666
Query: 425 ESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELELNAG 484
ESV GSS+GN GSVEGSN SQ D C+ADS+ LLEN ++ FQD +HEELE NA
Sbjct: 667 ESVGGSSDGNTGSVEGSNILGISQGDSCEADSELLLENGCVNAKEGFQDGLHEELEPNAA 726
Query: 485 LGSVLQSTSGIDSETVVQKPVMR 507
LG VL+S G+DSE V K V+R
Sbjct: 727 LGIVLKSRGGVDSEP-VPKSVLR 748
>gi|147790301|emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera]
Length = 778
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/551 (64%), Positives = 403/551 (73%), Gaps = 56/551 (10%)
Query: 1 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
+SVL ++DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG
Sbjct: 178 LSVLYNIDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 237
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNR 120
VNWALLVARVCQLYPNAVPSMLVSRFFRVYT WRWPNPVMLCAI+E ELGFSVWDPRKN
Sbjct: 238 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNP 297
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
RD+THHMPIITPAYPCMNSSYNVS STLRVMM+QFQYGN ICE +EL+ AQW ALFEPYL
Sbjct: 298 RDRTHHMPIITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNAQWGALFEPYL 357
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
FFESY+NYLQVDIVA + DDL AWKGWVESRLRQLTLMIERDT+GKLQCHPYPHEYVDTS
Sbjct: 358 FFESYKNYLQVDIVAVDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTS 417
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 300
K C+HCAFFMGLQRK GE++QEGQQFDIRG+V+EF+ SINMYMFWKPGMEI VSH+RRKQ
Sbjct: 418 KQCSHCAFFMGLQRKQGEIIQEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQ 477
Query: 301 IPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVD--QDGPEKRQSIS 358
IP YVFPEGYKR+R R +QQ+ E + +KRKKDPE VD QD KR +IS
Sbjct: 478 IPSYVFPEGYKRSRPQRPVNQQQGDEACRTGSSEKHMKRKKDPEEVDVEQDKAAKRLTIS 537
Query: 359 PQKQDSLSPDHLA-------PSSVRSGTGSNVEPVIPDKR---------------VLNQE 396
PQ+QDS+SP+ ++ SG+ E V D++ V N E
Sbjct: 538 PQRQDSVSPEIISHRFSSSSQECSASGSAKAKEIVEGDRKCQVGMGKLEDLVSTNVENIE 597
Query: 397 IAEGG----------------DVSNSSVITSVTSEVG----------------SCEDVGN 424
+ G D S+ + + +E G S DVG
Sbjct: 598 MGAIGRGMRWMKADEKGNIEPDKSDKPIPCTGNAEAGSVSNSSVVTSITSEVSSSGDVGF 657
Query: 425 ESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELELNAG 484
ESV GSS+GN GSVEGSN SQ D C+ADS+ LLEN ++ FQD +HEELE
Sbjct: 658 ESVGGSSDGNTGSVEGSNILGISQGDSCEADSELLLENGCVNAKEGFQDGLHEELEAATR 717
Query: 485 LGSVLQSTSGI 495
+ + +G+
Sbjct: 718 VVVIFAFNAGV 728
>gi|449480779|ref|XP_004155993.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 758
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/569 (63%), Positives = 412/569 (72%), Gaps = 70/569 (12%)
Query: 1 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
+SVL +VDEPTVRSLNGCRVADQILKLVPNVE F T LRCLKFWAKRRGVYSNVTGFLGG
Sbjct: 194 VSVLYNVDEPTVRSLNGCRVADQILKLVPNVESFRTALRCLKFWAKRRGVYSNVTGFLGG 253
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNR 120
VNWALLVARVCQLYPNAVPSML+SRFFRVYT+WRWPNPVMLCAI+E +LG SVWDPRKN
Sbjct: 254 VNWALLVARVCQLYPNAVPSMLLSRFFRVYTLWRWPNPVMLCAIEEDDLGCSVWDPRKNP 313
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
RD+THHMPIITPAYPCMNSSYNVSTSTLRVMM+QFQ+GN +CEE+ELNKAQWS+LFEPYL
Sbjct: 314 RDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKVCEEIELNKAQWSSLFEPYL 373
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
FFESY+NYLQVDIVAA+ADDL +WKGWVESR R LTL+IER T GKLQCHPYPHEYVDTS
Sbjct: 374 FFESYKNYLQVDIVAADADDLRSWKGWVESRFRHLTLLIERKTEGKLQCHPYPHEYVDTS 433
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 300
KPCAHCAFFMGLQRK GE++QEGQQFDIR SV+EFK + YMFWKPGMEI VSH+RR+Q
Sbjct: 434 KPCAHCAFFMGLQRKQGEIIQEGQQFDIRSSVDEFKHYTSSYMFWKPGMEIFVSHVRRRQ 493
Query: 301 IPPYVFPEGYKRTRHPRLASQQRSS-----ENGNEYQTGSGLKRKKDPESV--DQDGPEK 353
IPP+VFPEG+KR R RL++ QRS +NG LKRK DP + + + P+K
Sbjct: 494 IPPFVFPEGHKRFRASRLSALQRSPNQEDVQNGRSGSCERDLKRKNDPARIEGEHNSPQK 553
Query: 354 RQSISPQKQDSLSP-------------------------------------DHLAPSSVR 376
RQSISP++QDS+S + LA R
Sbjct: 554 RQSISPRRQDSVSSNISNFSNTASSERPEADIEAKTIVEKNSPCRTITRENEELAFGGSR 613
Query: 377 SGT--------------GSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEVGSCEDV 422
G GS VE + PDK + + SNSSVITS+TSE SCE+V
Sbjct: 614 IGNCSSRKDSSSVESDKGSTVEIIDPDKVPFTE--IDHRCASNSSVITSLTSESSSCENV 671
Query: 423 GNESVAGSSEGNNGSVEG----SNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEE 478
G AGSSEGN GS+EG SNNP +S D C+ADS+ L+NR ++G D +H E
Sbjct: 672 GFALAAGSSEGNAGSIEGSADESNNPGTSVVDSCEADSELQLDNRCVNG-----DSMHME 726
Query: 479 LELNAGLGSVLQSTSGIDSETVVQKPVMR 507
E NA L L G+ S T +Q PV+R
Sbjct: 727 TEPNAVLEMALNPGGGVKS-TTIQNPVIR 754
>gi|449448062|ref|XP_004141785.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
sativus]
Length = 772
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/583 (61%), Positives = 407/583 (69%), Gaps = 84/583 (14%)
Query: 1 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCT--------------TLRCLKFWAK 46
+SVL +VDEPTVRSLNGCRVADQILKLVP LRCLKFWAK
Sbjct: 194 VSVLYNVDEPTVRSLNGCRVADQILKLVPFFFFVKFFHPNIPVWKLXSPFALRCLKFWAK 253
Query: 47 RRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE 106
RRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSML+SRFFRVYT+WRWPNPVMLCAI+E
Sbjct: 254 RRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLLSRFFRVYTLWRWPNPVMLCAIEE 313
Query: 107 AELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVE 166
+LG SVWDPRKN RD+THHMPIITPAYPCMNSSYNVSTSTLRVMM+QFQ+GN +CEE+E
Sbjct: 314 DDLGCSVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKVCEEIE 373
Query: 167 LNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGK 226
LNKAQWS+LFEPYLFFESY+NYLQVDIVAA+ADDL +WKGWVESR R LTL+IER T GK
Sbjct: 374 LNKAQWSSLFEPYLFFESYKNYLQVDIVAADADDLRSWKGWVESRFRHLTLLIERKTEGK 433
Query: 227 LQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWK 286
LQCHPYPHEYVDTSKPCAHCAFFMGLQRK GE++QEGQQFDIR SV+EFK + YMFWK
Sbjct: 434 LQCHPYPHEYVDTSKPCAHCAFFMGLQRKQGEIIQEGQQFDIRSSVDEFKHYTSSYMFWK 493
Query: 287 PGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS-----ENGNEYQTGSGLKRKK 341
PGMEI VSH+RR+QIPP+VFPEG+KR R RL++ QRS +NG LKRK
Sbjct: 494 PGMEIFVSHVRRRQIPPFVFPEGHKRFRASRLSALQRSPNQEDVQNGRSGSCERDLKRKN 553
Query: 342 DPESV--DQDGPEKRQSISPQKQDSLSP-------------------------------- 367
DP + + + P+KRQSISP++QDS+S
Sbjct: 554 DPARIEGEHNSPQKRQSISPRRQDSVSSNISNFSNTASSERPEADIEAKTIVEKNSPCRT 613
Query: 368 -----DHLAPSSVRSGT--------------GSNVEPVIPDKRVLNQEIAEGGDVSNSSV 408
+ LA R G GS VE + PDK + + SNSSV
Sbjct: 614 ITRENEELAFGGSRIGNCSSRKDSSSVESDKGSTVEIIDPDKVPFTE--IDHRCASNSSV 671
Query: 409 ITSVTSEVGSCEDVGNESVAGSSEGNNGSVEG----SNNPVSSQSDCCDADSQSLLENRH 464
ITS+TSE SCE+VG AGSSEGN GS+EG SNNP +S D C+ADS+ L+NR
Sbjct: 672 ITSLTSESSSCENVGFALAAGSSEGNAGSIEGSADESNNPGTSVVDSCEADSELQLDNRC 731
Query: 465 LDGNGAFQDRVHEELELNAGLGSVLQSTSGIDSETVVQKPVMR 507
++G D +H E E NA L L G+ S T +Q PV+R
Sbjct: 732 VNG-----DSMHMETEPNAVLEMALNPGGGVKS-TTIQNPVIR 768
>gi|356522230|ref|XP_003529750.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 766
Score = 626 bits (1614), Expect = e-177, Method: Compositional matrix adjust.
Identities = 336/524 (64%), Positives = 390/524 (74%), Gaps = 32/524 (6%)
Query: 1 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
+SVL++VDEPTVRSLNGCRVADQILKLVPN+EHF TTLRCLKFWAKRRG+YSNVTGFLGG
Sbjct: 182 VSVLHNVDEPTVRSLNGCRVADQILKLVPNIEHFRTTLRCLKFWAKRRGIYSNVTGFLGG 241
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNR 120
VN ALLVARVCQ YPNAVPSMLVSRFFRVYT WRWP PVMLC I+E ELGF VW P KN
Sbjct: 242 VNLALLVARVCQFYPNAVPSMLVSRFFRVYTQWRWPTPVMLCPIEENELGFPVWHPGKNP 301
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
RD++HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGN IC E+EL++A W ALFE Y
Sbjct: 302 RDRSHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNKICGEIELSRACWKALFEQYS 361
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
FFESY+NYLQVD+VAA+ADDL +WKGWVESRLRQLTLMIERDT+GKLQCHPY HE+VDTS
Sbjct: 362 FFESYKNYLQVDVVAADADDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFVDTS 421
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 300
+ CAHCAFFMGLQRK GEVVQEGQQFDIRG+VEEF+ S+NMYMFWKPGMEI VSH+RR+Q
Sbjct: 422 RLCAHCAFFMGLQRKQGEVVQEGQQFDIRGTVEEFRHSVNMYMFWKPGMEIYVSHVRRRQ 481
Query: 301 IPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSG----LKRKKDPESVD--QDGPEKR 354
IP YV P+GYKR+R R SQ + ++ + +G+ ++++K+ + VD D KR
Sbjct: 482 IPFYVVPDGYKRSRLSRPTSQVENCKSFHNEVSGTEHVERIRKRKNNDGVDVRGDAIVKR 541
Query: 355 QSISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQE---IAEGGD--------- 402
QS SP S D LA S G +VE V + + N E ++ G
Sbjct: 542 QSASP------SEDRLARHSSLGTGGLSVEAVSDRQELRNVECNHLSNSGQDELDRTESP 595
Query: 403 --VSNSSVITSVTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLL 460
SNSSVITS VGS ED G+ +VAG E + G VE NN S + DS +L+
Sbjct: 596 EAASNSSVITS----VGSSEDTGSVTVAGCVEESTGGVEMMNNGWFEDSTYGN-DSVTLV 650
Query: 461 ENRHLDGNGAFQDRVHEELELNAGLGSVLQSTSGIDSETVVQKP 504
+N GN FQ + E+ + NA LG VL S + SE VVQ+P
Sbjct: 651 KNIVASGNEVFQHELQEQFQPNATLGMVLDSAEKVISE-VVQEP 693
>gi|357513525|ref|XP_003627051.1| Poly(A) polymerase [Medicago truncatula]
gi|355521073|gb|AET01527.1| Poly(A) polymerase [Medicago truncatula]
Length = 633
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 325/515 (63%), Positives = 380/515 (73%), Gaps = 22/515 (4%)
Query: 1 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
+SVL+++DEPTVRSLNGCRVADQILKLVPN+E+F TTLRCLKFWAKRRGVYSNVTGFLGG
Sbjct: 100 VSVLHNIDEPTVRSLNGCRVADQILKLVPNIEYFRTTLRCLKFWAKRRGVYSNVTGFLGG 159
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNR 120
VNWALLVARVCQLYPNAVPSMLVSRFFRVYT WRWPNPVMLC+I+E ELGFSVW P +N
Sbjct: 160 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFSVWHPLRNP 219
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
RD++H MPIITPAYPCMNSSYNVS STLRVMM+QFQYGN ICE++ELNK WSALF PY+
Sbjct: 220 RDRSHLMPIITPAYPCMNSSYNVSASTLRVMMEQFQYGNKICEDIELNKVGWSALFVPYV 279
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
FFE Y+N+LQ+D+VAA+ DDL AWKGWVESRLRQLTLMIERDT GKLQCHPYP EY+D +
Sbjct: 280 FFEGYKNFLQIDVVAADVDDLRAWKGWVESRLRQLTLMIERDTIGKLQCHPYPREYIDDT 339
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 300
+ C+H AFFMGLQRK GEVVQEGQQFDIRG+VE F+ SINMYMFWKPGM+I VSHIRR+Q
Sbjct: 340 RKCSHSAFFMGLQRKQGEVVQEGQQFDIRGTVEAFRHSINMYMFWKPGMDIHVSHIRRRQ 399
Query: 301 IPPYVFPEGYKRTRHPRLA--------SQQRSSENGNEYQTGSGLKRKKDPESVDQDGPE 352
IP YVFP+G+KR+R R S Q + +G E + G +KRK D + V QD
Sbjct: 400 IPCYVFPDGFKRSRPSRSTVPVENRPKSLQENEVSGTELR-GRNIKRKYDDKGVKQDVVL 458
Query: 353 KRQSISPQKQDSLSPDHLAPSS---VRSGTG---SNVEPVIPDKRVLNQEIAEGGDVSNS 406
K+ +P + SL+P + A S ++SG +N E D+R+ + E G SNS
Sbjct: 459 KKHCANPFVE-SLTPGNYAVSDCQELKSGESTSLTNSEQDELDRRMSPEAGTECG--SNS 515
Query: 407 SVITSVTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSL-LENRHL 465
S +TSV+SE GS E V + SVAG + + +VE NN S ADS L +
Sbjct: 516 SGVTSVSSEDGSPEYVASVSVAGYVDDSARAVEAMNN--SRFDTTYMADSVKLGIGTLAS 573
Query: 466 DGNGAFQDRVHEELELNAGLGSVLQSTS-GIDSET 499
N QD + LE A G L ST DSE
Sbjct: 574 ANNEVLQDTLQTHLEPIAMAGMFLDSTKESFDSEA 608
>gi|356515639|ref|XP_003526506.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 732
Score = 612 bits (1579), Expect = e-172, Method: Compositional matrix adjust.
Identities = 284/376 (75%), Positives = 322/376 (85%), Gaps = 9/376 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDEPTVRSLNGCRVADQILKLVPNVEHF TTLRCLKFWAKRRGVYSNVTGFLGGV
Sbjct: 193 SVLYDVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGV 252
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWA+LVAR+CQLYPNA+PSMLVSRFFRVYT WRWPNPVMLC+I+E ELGF +WDPR+N R
Sbjct: 253 NWAILVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPR 312
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLRVM+DQF YGN IC+E+ELNKAQWSALF+PY+F
Sbjct: 313 DRFHTMPIITPAYPCMNSSYNVSASTLRVMVDQFCYGNKICDEIELNKAQWSALFQPYIF 372
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDI+A++ DDLLAW+GWVESRLR LTL IERDT G LQCHPYPHEYVDTSK
Sbjct: 373 FEAYKNYLQVDIIASDTDDLLAWRGWVESRLRMLTLKIERDTNGMLQCHPYPHEYVDTSK 432
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
PCAH AFFMGLQRK G QEGQQFDIRG+V+EF+ INMYM+WKPGM+I VSH+RRKQ+
Sbjct: 433 PCAHSAFFMGLQRKEGVRGQEGQQFDIRGTVDEFRQEINMYMYWKPGMDIFVSHVRRKQL 492
Query: 302 PPYVFPEGYKRTRHPRLASQQR--SSENGNEYQTGSGL-----KRKKDPESVDQ--DGPE 352
P +VFP+GYKRTR PR S Q + ++ +G GL KRK E VD+ D P+
Sbjct: 493 PAFVFPDGYKRTRMPRHISHQAEITGDDATNCYSGPGLSERCIKRKNYSEMVDKKPDKPD 552
Query: 353 KRQSISPQKQDSLSPD 368
KR SISPQ+ + +SP+
Sbjct: 553 KRASISPQRLECVSPE 568
>gi|356528904|ref|XP_003533037.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 790
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 330/530 (62%), Positives = 389/530 (73%), Gaps = 26/530 (4%)
Query: 1 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
+SVL++VDEPTVRSLNGCRVADQILKLVPNVEHF TTLRCLKFWAKRRG+YSNVTGFLGG
Sbjct: 182 VSVLHNVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGIYSNVTGFLGG 241
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNR 120
VN ALLVARVCQ YP AVPSMLVSRFFRVYT WRWP PVMLC I+E +LGF VW P KN
Sbjct: 242 VNLALLVARVCQFYPKAVPSMLVSRFFRVYTQWRWPTPVMLCPIEENDLGFPVWHPGKNP 301
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
RD++HHMPIITPAYPCMNSSYNVS STLRVMM+QFQYGN IC E+EL+K W ALFE Y
Sbjct: 302 RDRSHHMPIITPAYPCMNSSYNVSMSTLRVMMEQFQYGNKICGEIELSKDCWKALFEKYS 361
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
FFESY+NYLQVD+VAA+ADDL +WKGWVESRLRQLTLMIERDT+GKLQCHPY HE+VDTS
Sbjct: 362 FFESYKNYLQVDVVAADADDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFVDTS 421
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 300
+ CAHCAFFMGL RK GEVVQEGQQFDIRG+VEEF+ S+NMYMFWKPGMEI VSH+RR+Q
Sbjct: 422 RQCAHCAFFMGLHRKEGEVVQEGQQFDIRGTVEEFRHSVNMYMFWKPGMEIYVSHVRRRQ 481
Query: 301 IPPYVFPEGYKRTRHPRLASQQRS--SENGNEYQTGSGLKRKKDPESVDQDGPEKRQSIS 358
IP YVFP+GYKR+R R SQ + S + NE ++R + + + DG + R+
Sbjct: 482 IPCYVFPDGYKRSRPSRPTSQFENCKSFHNNEVSVTEHVERIRKRK--NNDGVDVREDAI 539
Query: 359 PQKQDSLSP-DHLAPSSVRSGTGSNVEPVIPDKRVLNQE---IAEGGD-----------V 403
++Q + P D LA + G +VE V + + + E ++ G
Sbjct: 540 VKRQYACPPGDRLARRNSLGTGGLSVEAVSDSQELRSVECNHLSNSGQDDLDRTESPEAA 599
Query: 404 SNSSVITSVTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENR 463
SNSSVITS VGS ED+ + SVAG E + G VE NN + DS +L++N
Sbjct: 600 SNSSVITS----VGSSEDIVSVSVAGCVENSRG-VEMMNNG-RFEDTTYGNDSVTLVKNI 653
Query: 464 HLDGNGAFQDRVHEELELNAGLGSVLQSTSGIDSETVVQKPVMRLSLTST 513
GN FQ + ++L+ NA LG VL S + SE VQ+PV+R + ST
Sbjct: 654 VASGNEVFQHELQQQLQPNAMLGMVLDSAEKVLSEA-VQEPVIRHEIEST 702
>gi|53792977|dbj|BAD54151.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
Length = 740
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 324/566 (57%), Positives = 379/566 (66%), Gaps = 67/566 (11%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDE TVRSLNGCRVADQIL+LVPNVE+F TTLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 189 SVLYDVDEVTVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGV 248
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLCAI+E ELGF VWDPRK R
Sbjct: 249 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHR 308
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++HHMPIITPAYPCMNSSYNVSTSTLRVMM+QFQ+GN IC+E++++KA WSALFEP+ F
Sbjct: 309 DRSHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQF 368
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDI+A + +DL WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+
Sbjct: 369 FEAYKNYLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSR 428
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
CAHCAFFMGL RK G +QEGQQFDIRG+V+EF+ I MY +W+PGME+ VSH+RRKQI
Sbjct: 429 QCAHCAFFMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQI 488
Query: 302 PPYVFPEGYKRTR------HPRLASQQRSSENGNEYQTGSGL-KRKKDPESVDQDGPE-- 352
P YVFPEGYKR R HP+ S + E+G ++ G KRK D V P
Sbjct: 489 PSYVFPEGYKRPRPSRHINHPQ-QSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRS 547
Query: 353 -KRQSISPQKQDSLSPDHLAPSSVRSGT------GSNVEPV------IPDKRVLNQEIAE 399
KR SISP S+SP H SS SG S PV + LN +A
Sbjct: 548 VKRASISP----SISPVHQKTSSPPSGNIADASGASGGSPVSLANGNLEQANCLNSPLAS 603
Query: 400 -------------------------------GGDVSNSSVITSVTSEVGSCEDVGNESVA 428
G ++ N + T S E V +E V
Sbjct: 604 EKSLDSVTSGSKCVGVEAVCPSDATKEHDNCGSNMKNCTTTTVAVSLKRVAEKVVSELVG 663
Query: 429 GSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELELNAGLGSV 488
S G N S E + D A L+EN H GNG Q + EELE N G+ V
Sbjct: 664 SESLGGNKSGE----LLERAEDMGSA----LVENVHFGGNGVVQTGLPEELEPNNGIEVV 715
Query: 489 LQSTSGIDSETVVQKPVMRLSLTSTA 514
++ +G++S+ QK +R+SLTSTA
Sbjct: 716 SKAHAGVNSDA-PQKASLRVSLTSTA 740
>gi|255550972|ref|XP_002516534.1| Poly(A) polymerase beta, putative [Ricinus communis]
gi|223544354|gb|EEF45875.1| Poly(A) polymerase beta, putative [Ricinus communis]
Length = 754
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 334/558 (59%), Positives = 389/558 (69%), Gaps = 54/558 (9%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDE TVRSLNGCRVADQILKLVPNVEHF TTLRCLKFWAKRRGVYSNVTGFLGGV
Sbjct: 196 SVLYDVDEQTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGV 255
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWDPR+N R
Sbjct: 256 NWALLVARLCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRRNPR 315
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ HHMPIITPAYPCMNSSYNVS STLRVMM+QFQYGN ICEE+ELNKAQWSALFEPYLF
Sbjct: 316 DRFHHMPIITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEEIELNKAQWSALFEPYLF 375
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQ+DI+AA+ADDLLAWKGWVESRLRQLTL IERDT G LQCHPYP+EY+DTSK
Sbjct: 376 FEAYKNYLQIDIIAADADDLLAWKGWVESRLRQLTLKIERDTIGMLQCHPYPNEYIDTSK 435
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
C HCAFFMGLQR+ G QEGQQFDIRG+VEEF+ INMYMFWKPGM++ VSH RR+Q+
Sbjct: 436 QCPHCAFFMGLQRRKGVSGQEGQQFDIRGTVEEFRQEINMYMFWKPGMDVYVSHARRRQL 495
Query: 302 PPYVFPEGYKRTRHPRLASQQ--RSSENGNEYQTGS---GLKRKKDPESVD--QDGPEKR 354
P +VFP+GYKR+R R +QQ + S+ + GS LKRK D E VD D PEKR
Sbjct: 496 PAFVFPDGYKRSRTSRHPNQQAGKPSDVSATSRAGSVEGHLKRKNDHEVVDVRPDKPEKR 555
Query: 355 QSISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRV-----------LNQEIAEGGDV 403
S+SPQ+ S+SP+ SS R+ S E V + L++ ++ G V
Sbjct: 556 ASVSPQRLQSVSPESNTISSGRTSLVSFCEGVPLESSTVADVDSNSEGKLDRGHSDNGKV 615
Query: 404 SNSSV------------ITSVTS-------------EVGSCEDVGNE---------SVAG 429
+ V I++ TS E C+ + + + +
Sbjct: 616 TFRGVVQVTETINHDPRISAQTSMDLDDIPIYLSKVEEAECKIMNPDPKQELLDPYATSN 675
Query: 430 SSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELELNAGLGSVL 489
S G G + + D ADS SLLE LD + Q + E LE N + V+
Sbjct: 676 SINGEAPKTMGEDR-IGDLGDILAADSDSLLETDCLDVSRLSQSGLLENLEPNTEMVKVV 734
Query: 490 QSTSGIDSETVVQKPVMR 507
S G SE+ +QKPV+R
Sbjct: 735 NSQDGARSES-LQKPVIR 751
>gi|357124126|ref|XP_003563757.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 700
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 311/534 (58%), Positives = 362/534 (67%), Gaps = 58/534 (10%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL D+DE TVRSLNGCRVADQIL+LVPN+E+F TTLRCLK WAKRRGVYSNVTGFLGGV
Sbjct: 171 SVLYDIDEATVRSLNGCRVADQILRLVPNIENFRTTLRCLKHWAKRRGVYSNVTGFLGGV 230
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNAVPSMLVSRFFRV+T WRWPNPVMLCAI+E ELGF VWDPRKN R
Sbjct: 231 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWRWPNPVMLCAIEEEELGFPVWDPRKNPR 290
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+THHMPIITPAYPCMNSSYNVSTSTLRVM++QFQ+GN IC+E+ELNKA W ALFE + F
Sbjct: 291 DRTHHMPIITPAYPCMNSSYNVSTSTLRVMIEQFQFGNKICQEIELNKANWPALFESFQF 350
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDI+A + +DL WKGWVESRLRQLTL IERDTYGKLQCHPYP+EY D S+
Sbjct: 351 FEAYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGKLQCHPYPYEYADPSR 410
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
CAHCAFFMGL R G ++EGQQFDIRG+V+EF+ INMYMFWKPGME+ VSH+RRK+I
Sbjct: 411 QCAHCAFFMGLSRNVGVKIEEGQQFDIRGTVDEFRHDINMYMFWKPGMELAVSHVRRKEI 470
Query: 302 PPYVFPEGYKRTRHPRLASQQRSS-----ENGNEYQTGSG-LKRKKDPESVDQDGPEKRQ 355
P YVFPEGY+R R R S Q+ S ENGN + G LKRK D S D E +
Sbjct: 471 PAYVFPEGYRRPRPQRHVSHQQQSDKNDTENGNMTGSPDGQLKRKHD--SAGTDDTEPCR 528
Query: 356 SISPQKQDSLSPDHLAPSSVRSGTGSN--------------------------------- 382
S+ + S+SP H SS SG S+
Sbjct: 529 SVKRASRASVSPVHPTTSSPSSGNISDEATCNNQKKMSSNASGGSQNSHGSGNLEQANCS 588
Query: 383 ---------VEPVIPDKRVLNQEIAEGGDVSNSSV-----ITSVTSEVGSCEDVGNESVA 428
+ + D + + E GDV+N+ V + + T V C + +
Sbjct: 589 GSSPASEKSTDSIASDSKCVIGETVCSGDVTNNLVTCISPVNNSTPTVAVCTTLKRVAEK 648
Query: 429 GSSEGNNGSVEGSNNPVSSQSDCCDADSQS-LLENRHLDGNGAFQDRVHEELEL 481
SE G NNP + + D S L+EN H GNG Q +HEELE+
Sbjct: 649 VVSELVGSESLGGNNP--ELLEIAEKDMGSVLVENVHFGGNGVTQSGLHEELEV 700
>gi|356507941|ref|XP_003522721.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 651
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 281/378 (74%), Positives = 319/378 (84%), Gaps = 11/378 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDEPTVRSLNGCRVADQILKLVPNVEHF T LRCLKFWAKRRGVYSNVTGFLGGV
Sbjct: 192 SVLYDVDEPTVRSLNGCRVADQILKLVPNVEHFRTALRCLKFWAKRRGVYSNVTGFLGGV 251
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWA+LVAR+CQLYPNA+PSMLVSRFFRVYT WRWPNPVMLC+I+E ELGF +WDPR+N R
Sbjct: 252 NWAILVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPR 311
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLRVMM+QF+YGN IC+E+ELNKAQWSALF+PY+F
Sbjct: 312 DRFHTMPIITPAYPCMNSSYNVSASTLRVMMEQFRYGNKICDEIELNKAQWSALFQPYIF 371
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDI+A++ADDLLAW+GWVESRLR LTL IERDT G LQCHPYP+EYVDTSK
Sbjct: 372 FEAYKNYLQVDIIASDADDLLAWRGWVESRLRLLTLKIERDTNGMLQCHPYPNEYVDTSK 431
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
CAH AFFMGLQRK G QEGQQFDIRG+V+EF+ INMYM+WKPGM+I VSH+RRKQ+
Sbjct: 432 LCAHSAFFMGLQRKEGVRGQEGQQFDIRGTVDEFRQEINMYMYWKPGMDIFVSHVRRKQL 491
Query: 302 PPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSG---------LKRKKDPESVDQD--G 350
P +VFP GYKRTR PR S Q + + SG +KRK PE VD+
Sbjct: 492 PAFVFPGGYKRTRMPRHISHQAEKTGDDATKCYSGSGSGSSERCIKRKSCPEMVDKKPGK 551
Query: 351 PEKRQSISPQKQDSLSPD 368
P+KR SISPQ+ + +SP+
Sbjct: 552 PDKRASISPQRLECVSPE 569
>gi|326505742|dbj|BAJ95542.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 694
Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust.
Identities = 300/494 (60%), Positives = 359/494 (72%), Gaps = 28/494 (5%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
+VL D+DE TVRSL GCRVADQIL+LVPN+E F TTLRCLK WA+RRGVYSNVTGFLGGV
Sbjct: 171 AVLYDIDEATVRSLTGCRVADQILRLVPNIESFRTTLRCLKHWARRRGVYSNVTGFLGGV 230
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNAVPSMLVSRFFRV+T WRWP PVMLCAI+E ELGF VWDPRKN R
Sbjct: 231 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWRWPTPVMLCAIEEEELGFPVWDPRKNPR 290
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+THHMPIITPAYPCMNSSYNVSTSTLRVM++QFQ+GN IC+E+E+NKA WSALFEP+ F
Sbjct: 291 DRTHHMPIITPAYPCMNSSYNVSTSTLRVMIEQFQFGNKICQEIEMNKASWSALFEPFNF 350
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDI+A + +DL WKGWVESRLRQLTL IERDTYGKLQCHPYP+EY D S+
Sbjct: 351 FEAYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGKLQCHPYPYEYADPSR 410
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
CAHCAFFMGL RK G +QEGQQFDIRG+V+EF+ INMYMFWKPGME+ VSH+RRK+I
Sbjct: 411 QCAHCAFFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKEI 470
Query: 302 PPYVFPEGYKRTRHPRLASQQRSSENGNEYQTG---SGLKRKKDPESVDQDGPEKRQSIS 358
P YVFPEGYKR R R + Q S+ N+ G S LKRK D +D P QS+
Sbjct: 471 PAYVFPEGYKRPRPQRHVNHQHQSDK-NDPGNGSPDSQLKRKHDSTGIDDTEP--CQSV- 526
Query: 359 PQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEVGS 418
K+ S+SP H SS RSG S+ EP+ ++ + + G S S
Sbjct: 527 --KRASISPGHPKTSSPRSGNVSD-EPISNSQQKVTSNASGGSQDSPGS----------- 572
Query: 419 CEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCC--DADSQSLLENRHLDGNGAFQDRVH 476
GN+ S G++ + E S + V+S S C +A + ++H+D +D +
Sbjct: 573 ----GNQDQTKCS-GSSHASEKSLDSVASGSKCVKIEAVCSGDVTSKHVDCISPVKDSIA 627
Query: 477 EELELNAGLGSVLQ 490
+ ++ L V +
Sbjct: 628 PTVAVSTTLKRVAE 641
>gi|224284360|gb|ACN39915.1| unknown [Picea sitchensis]
Length = 701
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 312/535 (58%), Positives = 369/535 (68%), Gaps = 44/535 (8%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDE TVRSLNGCRV +QIL+LVPNVEHF TTLRC+KFWAKRRGVYSNVTGFLGGV
Sbjct: 189 SVLYNVDEQTVRSLNGCRVNEQILRLVPNVEHFRTTLRCMKFWAKRRGVYSNVTGFLGGV 248
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNA+PSMLVSRFFRV+T WRWPNPVML +I E ELGF VWDPRKN R
Sbjct: 249 NWALLVARVCQLYPNAIPSMLVSRFFRVFTQWRWPNPVMLRSIKEEELGFPVWDPRKNPR 308
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+THHMPIITPAYP MNSSYNVSTSTLRVM +QFQ GN +CE++E+NKA WSALF+PY F
Sbjct: 309 DRTHHMPIITPAYPGMNSSYNVSTSTLRVMTEQFQQGNKMCEDIEMNKANWSALFDPYPF 368
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDIVAA+ DDL WKGWVESRLRQLTL IERDT+G LQCHPYP EYVD SK
Sbjct: 369 FEAYKNYLQVDIVAADQDDLRLWKGWVESRLRQLTLKIERDTFGMLQCHPYPTEYVDNSK 428
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
C HCAFFMGLQRK G ++QEGQQFDIRG+V+EF+ S+ MYMFWKPGM+I VSH+RRKQI
Sbjct: 429 QCPHCAFFMGLQRKQGVLIQEGQQFDIRGTVDEFRQSVGMYMFWKPGMDIYVSHVRRKQI 488
Query: 302 PPYVFPEGYKRTRHPRLASQ-QRSSENGNE-------------------YQTGSGLKRKK 341
P YVFPEG +R R R A+Q ++S G E + ++K
Sbjct: 489 PSYVFPEGVRRVRSGRAANQIGKTSPQGRESSPKCCNGNFGDDIVEECNANSAEKANKRK 548
Query: 342 DPESVDQDGPEKRQSISPQ--KQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEIAE 399
+ D EKR ++SP K SLS ++ S RSG S AE
Sbjct: 549 HDMTTDVGKAEKRAAVSPNDVKSASLS---VSDVSNRSGLASQTSS------------AE 593
Query: 400 GGDVSNSSVITSVTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSL 459
D S+S T+ + +VG + G + NG + + + S
Sbjct: 594 EPDHSSS---TAGYGAIAKPVEVGEKPSKGCVK--NGDQLEQKRSFTQKESVEEIGSGKG 648
Query: 460 LENRHLDGNGAFQDRVHEELELNAGLGSVLQSTSGIDSETVVQKPVMRLSLTSTA 514
L+N + G Q+ EELE + + +L S +G+ SETV QKPV+R+SL STA
Sbjct: 649 LQNSCILRAGKCQNG-SEELESSINVEMILPSHAGVKSETV-QKPVLRVSLASTA 701
>gi|297724965|ref|NP_001174846.1| Os06g0558700 [Oryza sativa Japonica Group]
gi|255677141|dbj|BAH93574.1| Os06g0558700 [Oryza sativa Japonica Group]
Length = 708
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 310/533 (58%), Positives = 357/533 (66%), Gaps = 66/533 (12%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDE TVRSLNGCRVADQIL+LVPNVE+F TTLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 189 SVLYDVDEVTVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGV 248
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLCAI+E ELGF VWDPRK R
Sbjct: 249 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHR 308
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++HHMPIITPAYPCMNSSYNVSTSTLRVMM+QFQ+GN IC+E++++KA WSALFEP+ F
Sbjct: 309 DRSHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQF 368
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDI+A + +DL WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+
Sbjct: 369 FEAYKNYLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSR 428
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
CAHCAFFMGL RK G +QEGQQFDIRG+V+EF+ I MY +W+PGME+ VSH+RRKQI
Sbjct: 429 QCAHCAFFMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQI 488
Query: 302 PPYVFPEGYKRTR------HPRLASQQRSSENGNEYQTGSGL-KRKKDPESVDQDGPE-- 352
P YVFPEGYKR R HP+ S + E+G ++ G KRK D V P
Sbjct: 489 PSYVFPEGYKRPRPSRHINHPQ-QSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRS 547
Query: 353 -KRQSISPQKQDSLSPDHLAPSSVRSGT------GSNVEPV------IPDKRVLNQEIAE 399
KR SISP S+SP H SS SG S PV + LN +A
Sbjct: 548 VKRASISP----SISPVHQKTSSPPSGNIADASGASGGSPVSLANGNLEQANCLNSPLAS 603
Query: 400 -------------------------------GGDVSNSSVITSVTSEVGSCEDVGNESVA 428
G ++ N + T S E V +E V
Sbjct: 604 EKSLDSVTSGSKCVGVEAVCPSDATKEHDNCGSNMKNCTTTTVAVSLKRVAEKVVSELVG 663
Query: 429 GSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELEL 481
S G N S E + D A L+EN H GNG Q + EELE+
Sbjct: 664 SESLGGNKSGE----LLERAEDMGSA----LVENVHFGGNGVVQTGLPEELEV 708
>gi|58220767|gb|AAW68015.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 708
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 310/533 (58%), Positives = 357/533 (66%), Gaps = 66/533 (12%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDE TVRSLNGCRVADQIL+LVPNVE+F TTLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 189 SVLYDVDEVTVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGV 248
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLCAI+E ELGF VWDPRK R
Sbjct: 249 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHR 308
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++HHMPIITPAYPCMNSSYNVSTSTLRVMM+QFQ+GN IC+E++++KA WSALFEP+ F
Sbjct: 309 DRSHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQF 368
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDI+A + +DL WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+
Sbjct: 369 FEAYKNYLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSR 428
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
CAHCAFFMGL RK G +QEGQQFDIRG+V+EF+ I MY +W+PGME+ VSH+RRKQI
Sbjct: 429 QCAHCAFFMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQI 488
Query: 302 PPYVFPEGYKRTR------HPRLASQQRSSENGNEYQTGSGL-KRKKDPESVDQDGPE-- 352
P YVFPEGYKR R HP+ S + E+G ++ G KRK D V P
Sbjct: 489 PSYVFPEGYKRPRPSRHINHPQ-QSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRS 547
Query: 353 -KRQSISPQKQDSLSPDHLAPSSVRSGT------GSNVEPV------IPDKRVLNQEIAE 399
KR SISP S+SP H SS SG S PV + LN +A
Sbjct: 548 VKRASISP----SISPVHQKTSSPPSGNIADASGASGGSPVSLANGNLEQANCLNSPLAS 603
Query: 400 -------------------------------GGDVSNSSVITSVTSEVGSCEDVGNESVA 428
G ++ N + T S E V +E V
Sbjct: 604 EKSLDSVTSGSKCVGVEAVCPSDATKEHDNCGSNMKNCTTTTVAVSLKRVAEKVVSELVG 663
Query: 429 GSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELEL 481
S G N S E + D A L+EN H GNG Q + EELE+
Sbjct: 664 SESLGGNKSGE----LLERAEDMGSA----LVENVHFGGNGVVQTGLPEELEV 708
>gi|293335951|ref|NP_001168358.1| uncharacterized protein LOC100382126 [Zea mays]
gi|223947741|gb|ACN27954.1| unknown [Zea mays]
gi|413943856|gb|AFW76505.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 694
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 301/516 (58%), Positives = 349/516 (67%), Gaps = 31/516 (6%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDE TVRSLNGCRVADQI++LVPN E+F T LRCLK+WAKRRGVYSNVTGFLGGV
Sbjct: 180 SVLYDVDEATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGV 239
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLC+I+E ELGF VWDPRKN R
Sbjct: 240 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPR 299
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ HHMPIITPAYPCMNSSYNVSTSTLRVM++QFQ+GN IC+E+E+NK W ALFEP+ F
Sbjct: 300 DRCHHMPIITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQF 359
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDI+A + +DL WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+
Sbjct: 360 FEAYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSR 419
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
CAHCAFFMGL RK G +QEGQQFDIRG+V+EF+ INMYMFWKPGME+ VSH+RRKQ+
Sbjct: 420 QCAHCAFFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQV 479
Query: 302 PPYVFPEGYKR---TRHPRLASQQRSSENGNEYQT-GSGLKRKKDPESVDQDGPEKRQSI 357
P YVFPEGYKR +RH S + +E+G ++ S LKRK D D KR S
Sbjct: 480 PAYVFPEGYKRPRPSRHVNHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSST 539
Query: 358 SP-----QKQDSLSPDHL--------APSSVRSGTGSNVEPV--IPDKRVLNQEIAEGGD 402
SP Q + D APS G+ ++ + PD + G
Sbjct: 540 SPVHPKNSPQSGSTGDETRCNNQIKRAPSDASGGSPASPQASERSPDTILSAPRCTTTGA 599
Query: 403 VSNSSVITS----------VTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCC 452
V + I+ T V C + + SE GSNN
Sbjct: 600 VCSGDAISKHSSVPLVENCTTPTVAVCTTLKRVAEKVVSELVGSERLGSNNSAELLESME 659
Query: 453 DADSQSLLENRHLDGNGAFQDRVHEELELNAGLGSV 488
D L EN GNG Q + EELE N + +V
Sbjct: 660 KED--VLAENVRFGGNGVAQGGLPEELEPNNRIEAV 693
>gi|413943851|gb|AFW76500.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
gi|413943852|gb|AFW76501.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 702
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 299/509 (58%), Positives = 346/509 (67%), Gaps = 31/509 (6%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDE TVRSLNGCRVADQI++LVPN E+F T LRCLK+WAKRRGVYSNVTGFLGGV
Sbjct: 180 SVLYDVDEATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGV 239
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLC+I+E ELGF VWDPRKN R
Sbjct: 240 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPR 299
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ HHMPIITPAYPCMNSSYNVSTSTLRVM++QFQ+GN IC+E+E+NK W ALFEP+ F
Sbjct: 300 DRCHHMPIITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQF 359
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDI+A + +DL WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+
Sbjct: 360 FEAYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSR 419
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
CAHCAFFMGL RK G +QEGQQFDIRG+V+EF+ INMYMFWKPGME+ VSH+RRKQ+
Sbjct: 420 QCAHCAFFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQV 479
Query: 302 PPYVFPEGYKR---TRHPRLASQQRSSENGNEYQT-GSGLKRKKDPESVDQDGPEKRQSI 357
P YVFPEGYKR +RH S + +E+G ++ S LKRK D D KR S
Sbjct: 480 PAYVFPEGYKRPRPSRHVNHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSST 539
Query: 358 SP-----QKQDSLSPDHL--------APSSVRSGTGSNVEPV--IPDKRVLNQEIAEGGD 402
SP Q + D APS G+ ++ + PD + G
Sbjct: 540 SPVHPKNSPQSGSTGDETRCNNQIKRAPSDASGGSPASPQASERSPDTILSAPRCTTTGA 599
Query: 403 VSNSSVITS----------VTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCC 452
V + I+ T V C + + SE GSNN
Sbjct: 600 VCSGDAISKHSSVPLVENCTTPTVAVCTTLKRVAEKVVSELVGSERLGSNNSAELLESME 659
Query: 453 DADSQSLLENRHLDGNGAFQDRVHEELEL 481
D L EN GNG Q + EELE+
Sbjct: 660 KED--VLAENVRFGGNGVAQGGLPEELEV 686
>gi|413943853|gb|AFW76502.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 696
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 299/509 (58%), Positives = 346/509 (67%), Gaps = 31/509 (6%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDE TVRSLNGCRVADQI++LVPN E+F T LRCLK+WAKRRGVYSNVTGFLGGV
Sbjct: 180 SVLYDVDEATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGV 239
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLC+I+E ELGF VWDPRKN R
Sbjct: 240 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPR 299
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ HHMPIITPAYPCMNSSYNVSTSTLRVM++QFQ+GN IC+E+E+NK W ALFEP+ F
Sbjct: 300 DRCHHMPIITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQF 359
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDI+A + +DL WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+
Sbjct: 360 FEAYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSR 419
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
CAHCAFFMGL RK G +QEGQQFDIRG+V+EF+ INMYMFWKPGME+ VSH+RRKQ+
Sbjct: 420 QCAHCAFFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQV 479
Query: 302 PPYVFPEGYKR---TRHPRLASQQRSSENGNEYQT-GSGLKRKKDPESVDQDGPEKRQSI 357
P YVFPEGYKR +RH S + +E+G ++ S LKRK D D KR S
Sbjct: 480 PAYVFPEGYKRPRPSRHVNHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSST 539
Query: 358 SP-----QKQDSLSPDHL--------APSSVRSGTGSNVEPV--IPDKRVLNQEIAEGGD 402
SP Q + D APS G+ ++ + PD + G
Sbjct: 540 SPVHPKNSPQSGSTGDETRCNNQIKRAPSDASGGSPASPQASERSPDTILSAPRCTTTGA 599
Query: 403 VSNSSVITS----------VTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCC 452
V + I+ T V C + + SE GSNN
Sbjct: 600 VCSGDAISKHSSVPLVENCTTPTVAVCTTLKRVAEKVVSELVGSERLGSNNSAELLESME 659
Query: 453 DADSQSLLENRHLDGNGAFQDRVHEELEL 481
D L EN GNG Q + EELE+
Sbjct: 660 KED--VLAENVRFGGNGVAQGGLPEELEI 686
>gi|413943854|gb|AFW76503.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
gi|413943855|gb|AFW76504.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 686
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 299/509 (58%), Positives = 346/509 (67%), Gaps = 31/509 (6%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDE TVRSLNGCRVADQI++LVPN E+F T LRCLK+WAKRRGVYSNVTGFLGGV
Sbjct: 180 SVLYDVDEATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGV 239
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLC+I+E ELGF VWDPRKN R
Sbjct: 240 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPR 299
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ HHMPIITPAYPCMNSSYNVSTSTLRVM++QFQ+GN IC+E+E+NK W ALFEP+ F
Sbjct: 300 DRCHHMPIITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQF 359
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDI+A + +DL WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+
Sbjct: 360 FEAYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSR 419
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
CAHCAFFMGL RK G +QEGQQFDIRG+V+EF+ INMYMFWKPGME+ VSH+RRKQ+
Sbjct: 420 QCAHCAFFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQV 479
Query: 302 PPYVFPEGYKR---TRHPRLASQQRSSENGNEYQT-GSGLKRKKDPESVDQDGPEKRQSI 357
P YVFPEGYKR +RH S + +E+G ++ S LKRK D D KR S
Sbjct: 480 PAYVFPEGYKRPRPSRHVNHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSST 539
Query: 358 SP-----QKQDSLSPDHL--------APSSVRSGTGSNVEPV--IPDKRVLNQEIAEGGD 402
SP Q + D APS G+ ++ + PD + G
Sbjct: 540 SPVHPKNSPQSGSTGDETRCNNQIKRAPSDASGGSPASPQASERSPDTILSAPRCTTTGA 599
Query: 403 VSNSSVITS----------VTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCC 452
V + I+ T V C + + SE GSNN
Sbjct: 600 VCSGDAISKHSSVPLVENCTTPTVAVCTTLKRVAEKVVSELVGSERLGSNNSAELLESME 659
Query: 453 DADSQSLLENRHLDGNGAFQDRVHEELEL 481
D L EN GNG Q + EELE+
Sbjct: 660 KED--VLAENVRFGGNGVAQGGLPEELEV 686
>gi|449461393|ref|XP_004148426.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 863
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 283/426 (66%), Positives = 327/426 (76%), Gaps = 6/426 (1%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDE TVRSLNGCRVADQIL+LVPNVEHF TTLRCLKFWAKRRGVYSNVTGFLGGV
Sbjct: 188 SVLYNVDEQTVRSLNGCRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGV 247
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVA+VCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLC+I+E ELGF VWDPR+N R
Sbjct: 248 NWALLVAQVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPR 307
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVSTSTLRVMM+QF+YGN+ICEE++L+KAQWSALFEPYLF
Sbjct: 308 DRFHLMPIITPAYPCMNSSYNVSTSTLRVMMEQFRYGNSICEEIDLSKAQWSALFEPYLF 367
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDI+AA+ADDLLAWKGWVESR RQLTL IERDT G LQCHPYP EY DTSK
Sbjct: 368 FETYKNYLQVDIIAADADDLLAWKGWVESRFRQLTLKIERDTRGMLQCHPYPIEYSDTSK 427
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
PC+HCAFFMGLQRK G Q GQQFDIRG+V+EF+ INMY FWKPGM+I VSH+RRKQ+
Sbjct: 428 PCSHCAFFMGLQRKEGLRGQGGQQFDIRGTVDEFRQEINMYAFWKPGMDIYVSHVRRKQL 487
Query: 302 PPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQS---IS 358
P +VFP+G+KR + R QQ + + Q SG+ K D + EK + IS
Sbjct: 488 PTFVFPDGHKRAKPLRHEGQQVDTVCADMLQDQSGITEKGKKRKSDHEEEEKEKKQALIS 547
Query: 359 PQKQDSLSPDHLA---PSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSE 415
P + S P+ S +N + + Q ++ N + I ++T E
Sbjct: 548 PPAEQSPMPEFFGGDPDGKWPSSKFANADCHLKVWSSFEQPVSRTDTNGNGTDIATLTKE 607
Query: 416 VGSCED 421
GS D
Sbjct: 608 TGSTGD 613
>gi|297802710|ref|XP_002869239.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
gi|297315075|gb|EFH45498.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
Length = 748
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 272/378 (71%), Positives = 311/378 (82%), Gaps = 8/378 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDEPTVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 189 SVLCDVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 248
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWDPRKN R
Sbjct: 249 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRKNHR 308
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+F
Sbjct: 309 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 368
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDIVA +A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++
Sbjct: 369 FEAYKNYLQVDIVAGDAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 428
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
HCAFFMGLQR G QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+
Sbjct: 429 QFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQL 488
Query: 302 PPYVFPEGYKRTRHPRLASQQ--RSSENGNEYQTGSGL----KRKKDPESVDQ--DGPEK 353
PP+VFP GY+R R R +Q +S E+G +GS + KRK D E +D + PEK
Sbjct: 489 PPFVFPNGYRRPRQSRHQNQPGGKSGEDGTVSHSGSVVERHAKRKNDSEMMDARPEKPEK 548
Query: 354 RQSISPQKQDSLSPDHLA 371
R S+SPQ D +SP+ A
Sbjct: 549 RASLSPQSLDIVSPESSA 566
>gi|449515462|ref|XP_004164768.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
sativus]
Length = 544
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/336 (78%), Positives = 296/336 (88%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDE TVRSLNGCRVADQIL+LVPNVEHF TTLRCLKFWAKRRGVYSNVTGFLGGV
Sbjct: 188 SVLYNVDEQTVRSLNGCRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGV 247
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVA+VCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLC+I+E ELGF VWDPR+N R
Sbjct: 248 NWALLVAQVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPR 307
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVSTSTLRVMM+QF+YGN+ICEE++L+KAQWSALFEPYLF
Sbjct: 308 DRFHLMPIITPAYPCMNSSYNVSTSTLRVMMEQFRYGNSICEEIDLSKAQWSALFEPYLF 367
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDI+AA+ADDLLAWKGWVESR RQLTL IERDT G LQCHPYP EY DTSK
Sbjct: 368 FETYKNYLQVDIIAADADDLLAWKGWVESRFRQLTLKIERDTRGMLQCHPYPIEYSDTSK 427
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
PC+HCAFFMGLQRK G Q GQQFDIRG+V+EF+ INMY FWKPGM+I VSH+RRKQ+
Sbjct: 428 PCSHCAFFMGLQRKEGLRGQGGQQFDIRGTVDEFRQEINMYAFWKPGMDIYVSHVRRKQL 487
Query: 302 PPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGL 337
P +VFP+G+KR + R QQ + + Q SG+
Sbjct: 488 PTFVFPDGHKRAKPLRHEGQQVDTVCADMLQDQSGI 523
>gi|42573145|ref|NP_974669.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|186515704|ref|NP_001119102.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|222422953|dbj|BAH19461.1| AT4G32850 [Arabidopsis thaliana]
gi|332660729|gb|AEE86129.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660734|gb|AEE86134.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 745
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 311/559 (55%), Positives = 379/559 (67%), Gaps = 49/559 (8%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDEPTVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+F
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDIVAA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
HCAFFMGLQR G QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+
Sbjct: 430 QFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQL 489
Query: 302 PPYVFPEGYKRTRHPRLASQQ--RSSENGNEYQTGSGL----KRKKDPESVD--QDGPEK 353
PP+VFP GY+R R R + +S E+G+ +GS + KRK D E +D + PEK
Sbjct: 490 PPFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEK 549
Query: 354 RQSISPQKQDSLSPDHLAPSSVRSGTGSNV-----EPVIPDKRVLNQEIAEGGDV----- 403
R S+SPQ D +SP++ A ++ + N+ E + D LN E E D+
Sbjct: 550 RASLSPQSLDIVSPENSAITTGWTPPVCNLRRPPSEEIEADN--LNTECTELTDLARNEC 607
Query: 404 -SNSSVITSVTS------------EVGSCEDVGNESVAGSSEGNNGSVEGSNNPVS-SQS 449
S S + V S +G C + V G +++ + VS S +
Sbjct: 608 NSGSEQVLEVDSMAVVQECSDPAEPLGKCVTPDSVDVVACVSGQEENLDRNLRSVSISGT 667
Query: 450 DCCDADSQSLLENRHLDGNG--------------AFQDRVHEELELNAGLGSVLQSTSGI 495
D S+S +NR +G G Q + E+L+ N+ + + +S
Sbjct: 668 DSPLLPSRSCGQNRDYEGFGFPAANSDPMGKKNLYSQSGMSEDLQSNSLVSGMEKSEDRA 727
Query: 496 DSETVVQKPVMRLSLTSTA 514
SE+ QK +RLSL ST
Sbjct: 728 RSES-FQKSQIRLSLKSTV 745
>gi|42570181|ref|NP_849562.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|79610218|ref|NP_974670.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660726|gb|AEE86126.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660728|gb|AEE86128.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 738
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 270/378 (71%), Positives = 312/378 (82%), Gaps = 8/378 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDEPTVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+F
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDIVAA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
HCAFFMGLQR G QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+
Sbjct: 430 QFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQL 489
Query: 302 PPYVFPEGYKRTRHPRLASQQ--RSSENGNEYQTGSGL----KRKKDPESVD--QDGPEK 353
PP+VFP GY+R R R + +S E+G+ +GS + KRK D E +D + PEK
Sbjct: 490 PPFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEK 549
Query: 354 RQSISPQKQDSLSPDHLA 371
R S+SPQ D +SP++ A
Sbjct: 550 RASLSPQSLDIVSPENSA 567
>gi|32527646|gb|AAP86216.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 737
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 270/378 (71%), Positives = 312/378 (82%), Gaps = 8/378 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDEPTVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 189 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 248
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN R
Sbjct: 249 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 308
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+F
Sbjct: 309 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 368
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDIVAA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++
Sbjct: 369 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 428
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
HCAFFMGLQR G QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+
Sbjct: 429 QFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQL 488
Query: 302 PPYVFPEGYKRTRHPRLASQQ--RSSENGNEYQTGSGL----KRKKDPESVD--QDGPEK 353
PP+VFP GY+R R R + +S E+G+ +GS + KRK D E +D + PEK
Sbjct: 489 PPFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEK 548
Query: 354 RQSISPQKQDSLSPDHLA 371
R S+SPQ D +SP++ A
Sbjct: 549 RASLSPQSLDIVSPENSA 566
>gi|42567333|ref|NP_195011.4| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660727|gb|AEE86127.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 735
Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust.
Identities = 270/378 (71%), Positives = 312/378 (82%), Gaps = 8/378 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDEPTVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+F
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDIVAA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
HCAFFMGLQR G QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+
Sbjct: 430 QFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQL 489
Query: 302 PPYVFPEGYKRTRHPRLASQQ--RSSENGNEYQTGSGL----KRKKDPESVD--QDGPEK 353
PP+VFP GY+R R R + +S E+G+ +GS + KRK D E +D + PEK
Sbjct: 490 PPFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEK 549
Query: 354 RQSISPQKQDSLSPDHLA 371
R S+SPQ D +SP++ A
Sbjct: 550 RASLSPQSLDIVSPENSA 567
>gi|30689510|ref|NP_849561.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|17978937|gb|AAL47435.1| AT4g32850/T16I18_60 [Arabidopsis thaliana]
gi|23308169|gb|AAN18054.1| At4g32850/T16I18_60 [Arabidopsis thaliana]
gi|332660730|gb|AEE86130.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 741
Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust.
Identities = 270/378 (71%), Positives = 312/378 (82%), Gaps = 8/378 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDEPTVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+F
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDIVAA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
HCAFFMGLQR G QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+
Sbjct: 430 QFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQL 489
Query: 302 PPYVFPEGYKRTRHPRLASQQ--RSSENGNEYQTGSGL----KRKKDPESVD--QDGPEK 353
PP+VFP GY+R R R + +S E+G+ +GS + KRK D E +D + PEK
Sbjct: 490 PPFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEK 549
Query: 354 RQSISPQKQDSLSPDHLA 371
R S+SPQ D +SP++ A
Sbjct: 550 RASLSPQSLDIVSPENSA 567
>gi|79326212|ref|NP_001031779.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660733|gb|AEE86133.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 765
Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust.
Identities = 270/378 (71%), Positives = 312/378 (82%), Gaps = 8/378 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDEPTVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+F
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDIVAA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
HCAFFMGLQR G QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+
Sbjct: 430 QFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQL 489
Query: 302 PPYVFPEGYKRTRHPRLASQQ--RSSENGNEYQTGSGL----KRKKDPESVD--QDGPEK 353
PP+VFP GY+R R R + +S E+G+ +GS + KRK D E +D + PEK
Sbjct: 490 PPFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEK 549
Query: 354 RQSISPQKQDSLSPDHLA 371
R S+SPQ D +SP++ A
Sbjct: 550 RASLSPQSLDIVSPENSA 567
>gi|186515708|ref|NP_001119103.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|227202692|dbj|BAH56819.1| AT4G32850 [Arabidopsis thaliana]
gi|332660735|gb|AEE86135.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 745
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 270/378 (71%), Positives = 312/378 (82%), Gaps = 8/378 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDEPTVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+F
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDIVAA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
HCAFFMGLQR G QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+
Sbjct: 430 QFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQL 489
Query: 302 PPYVFPEGYKRTRHPRLASQQ--RSSENGNEYQTGSGL----KRKKDPESVD--QDGPEK 353
PP+VFP GY+R R R + +S E+G+ +GS + KRK D E +D + PEK
Sbjct: 490 PPFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEK 549
Query: 354 RQSISPQKQDSLSPDHLA 371
R S+SPQ D +SP++ A
Sbjct: 550 RASLSPQSLDIVSPENSA 567
>gi|7270232|emb|CAB80002.1| putative poly(A) polymerase [Arabidopsis thaliana]
Length = 729
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 270/378 (71%), Positives = 312/378 (82%), Gaps = 8/378 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDEPTVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 189 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 248
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN R
Sbjct: 249 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 308
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+F
Sbjct: 309 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 368
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDIVAA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++
Sbjct: 369 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 428
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
HCAFFMGLQR G QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+
Sbjct: 429 QFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQL 488
Query: 302 PPYVFPEGYKRTRHPRLASQQ--RSSENGNEYQTGSGL----KRKKDPESVD--QDGPEK 353
PP+VFP GY+R R R + +S E+G+ +GS + KRK D E +D + PEK
Sbjct: 489 PPFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEK 548
Query: 354 RQSISPQKQDSLSPDHLA 371
R S+SPQ D +SP++ A
Sbjct: 549 RASLSPQSLDIVSPENSA 566
>gi|42573143|ref|NP_974668.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660731|gb|AEE86131.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 730
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 270/378 (71%), Positives = 312/378 (82%), Gaps = 8/378 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDEPTVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+F
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDIVAA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
HCAFFMGLQR G QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+
Sbjct: 430 QFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQL 489
Query: 302 PPYVFPEGYKRTRHPRLASQQ--RSSENGNEYQTGSGL----KRKKDPESVD--QDGPEK 353
PP+VFP GY+R R R + +S E+G+ +GS + KRK D E +D + PEK
Sbjct: 490 PPFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEK 549
Query: 354 RQSISPQKQDSLSPDHLA 371
R S+SPQ D +SP++ A
Sbjct: 550 RASLSPQSLDIVSPENSA 567
>gi|79326203|ref|NP_001031778.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660732|gb|AEE86132.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 716
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 270/378 (71%), Positives = 312/378 (82%), Gaps = 8/378 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDEPTVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+F
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDIVAA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
HCAFFMGLQR G QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+
Sbjct: 430 QFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQL 489
Query: 302 PPYVFPEGYKRTRHPRLASQQ--RSSENGNEYQTGSGL----KRKKDPESVD--QDGPEK 353
PP+VFP GY+R R R + +S E+G+ +GS + KRK D E +D + PEK
Sbjct: 490 PPFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEK 549
Query: 354 RQSISPQKQDSLSPDHLA 371
R S+SPQ D +SP++ A
Sbjct: 550 RASLSPQSLDIVSPENSA 567
>gi|334184470|ref|NP_001189603.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252670|gb|AEC07764.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 797
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 276/426 (64%), Positives = 324/426 (76%), Gaps = 21/426 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDE TVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 192 SVLCDVDEQTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 251
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQ YPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E +L F VWDPRKN R
Sbjct: 252 NWALLVARLCQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHR 311
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GNTIC+E+ELNK WS+LF+ Y+F
Sbjct: 312 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMF 371
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVD++AA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDTSK
Sbjct: 372 FEAYKNYLQVDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSK 431
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
HCAFFMGLQR G QE QQFDIRG+V+EF+ +NMYMFW+PGM++ VSH+RR+Q+
Sbjct: 432 QFRHCAFFMGLQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQL 491
Query: 302 PPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSG---------LKRKKDPESVDQ--DG 350
P +VFP GYKR+R R SQQ E G+E G G KRK D E ++ +
Sbjct: 492 PSFVFPNGYKRSRQSRHQSQQ-CREPGDE---GVGSLSDSVERYAKRKNDDEIMNSRPEK 547
Query: 351 PEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVIT 410
EKR S S D+ SPD SS + +G+ ++P R + + G V N + +
Sbjct: 548 REKRASCSLHTLDAASPD----SSGITTSGTPQIGIVPGPRA--ECLVTGDLVCNVTSLP 601
Query: 411 SVTSEV 416
+V E
Sbjct: 602 NVEVEA 607
>gi|79323064|ref|NP_001031417.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252669|gb|AEC07763.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 786
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 276/425 (64%), Positives = 324/425 (76%), Gaps = 21/425 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDE TVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 192 SVLCDVDEQTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 251
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQ YPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E +L F VWDPRKN R
Sbjct: 252 NWALLVARLCQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHR 311
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GNTIC+E+ELNK WS+LF+ Y+F
Sbjct: 312 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMF 371
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVD++AA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDTSK
Sbjct: 372 FEAYKNYLQVDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSK 431
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
HCAFFMGLQR G QE QQFDIRG+V+EF+ +NMYMFW+PGM++ VSH+RR+Q+
Sbjct: 432 QFRHCAFFMGLQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQL 491
Query: 302 PPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSG---------LKRKKDPESVDQ--DG 350
P +VFP GYKR+R R SQQ E G+E G G KRK D E ++ +
Sbjct: 492 PSFVFPNGYKRSRQSRHQSQQ-CREPGDE---GVGSLSDSVERYAKRKNDDEIMNSRPEK 547
Query: 351 PEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVIT 410
EKR S S D+ SPD SS + +G+ ++P R + + G V N + +
Sbjct: 548 REKRASCSLHTLDAASPD----SSGITTSGTPQIGIVPGPRA--ECLVTGDLVCNVTSLP 601
Query: 411 SVTSE 415
+V E
Sbjct: 602 NVEVE 606
>gi|30682917|ref|NP_850071.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252668|gb|AEC07762.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 787
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 276/426 (64%), Positives = 324/426 (76%), Gaps = 21/426 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDE TVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 192 SVLCDVDEQTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 251
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQ YPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E +L F VWDPRKN R
Sbjct: 252 NWALLVARLCQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHR 311
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GNTIC+E+ELNK WS+LF+ Y+F
Sbjct: 312 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMF 371
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVD++AA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDTSK
Sbjct: 372 FEAYKNYLQVDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSK 431
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
HCAFFMGLQR G QE QQFDIRG+V+EF+ +NMYMFW+PGM++ VSH+RR+Q+
Sbjct: 432 QFRHCAFFMGLQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQL 491
Query: 302 PPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSG---------LKRKKDPESVDQ--DG 350
P +VFP GYKR+R R SQQ E G+E G G KRK D E ++ +
Sbjct: 492 PSFVFPNGYKRSRQSRHQSQQ-CREPGDE---GVGSLSDSVERYAKRKNDDEIMNSRPEK 547
Query: 351 PEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVIT 410
EKR S S D+ SPD SS + +G+ ++P R + + G V N + +
Sbjct: 548 REKRASCSLHTLDAASPD----SSGITTSGTPQIGIVPGPRA--ECLVTGDLVCNVTSLP 601
Query: 411 SVTSEV 416
+V E
Sbjct: 602 NVEVEA 607
>gi|18400958|ref|NP_565611.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|31747891|gb|AAF66438.2|AF255297_1 nuclear poly(A) polymerase [Arabidopsis thaliana]
gi|14532700|gb|AAK64151.1| putative poly(A) polymerase [Arabidopsis thaliana]
gi|18491197|gb|AAL69501.1| putative poly(A) polymerase [Arabidopsis thaliana]
gi|20197361|gb|AAC42245.2| putative poly(A) polymerase [Arabidopsis thaliana]
gi|330252667|gb|AEC07761.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 800
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 276/425 (64%), Positives = 324/425 (76%), Gaps = 21/425 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDE TVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 192 SVLCDVDEQTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 251
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQ YPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E +L F VWDPRKN R
Sbjct: 252 NWALLVARLCQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHR 311
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GNTIC+E+ELNK WS+LF+ Y+F
Sbjct: 312 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMF 371
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVD++AA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDTSK
Sbjct: 372 FEAYKNYLQVDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSK 431
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
HCAFFMGLQR G QE QQFDIRG+V+EF+ +NMYMFW+PGM++ VSH+RR+Q+
Sbjct: 432 QFRHCAFFMGLQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQL 491
Query: 302 PPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSG---------LKRKKDPESVDQ--DG 350
P +VFP GYKR+R R SQQ E G+E G G KRK D E ++ +
Sbjct: 492 PSFVFPNGYKRSRQSRHQSQQ-CREPGDE---GVGSLSDSVERYAKRKNDDEIMNSRPEK 547
Query: 351 PEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVIT 410
EKR S S D+ SPD SS + +G+ ++P R + + G V N + +
Sbjct: 548 REKRASCSLHTLDAASPD----SSGITTSGTPQIGIVPGPRA--ECLVTGDLVCNVTSLP 601
Query: 411 SVTSE 415
+V E
Sbjct: 602 NVEVE 606
>gi|297825665|ref|XP_002880715.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326554|gb|EFH56974.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 788
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 264/373 (70%), Positives = 302/373 (80%), Gaps = 7/373 (1%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDE TVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 193 SVLCDVDEQTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 252
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQLYPNA+PSMLVSRFFRVY WRWPNPVMLC I+E EL F VWDPRKN R
Sbjct: 253 NWALLVARLCQLYPNAIPSMLVSRFFRVYIQWRWPNPVMLCTIEEDELSFPVWDPRKNHR 312
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GNTIC+E+ELNK QWS+LFE Y+F
Sbjct: 313 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQQWSSLFEQYMF 372
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVD++A +A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDTSK
Sbjct: 373 FEAYKNYLQVDVLALDAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSK 432
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
HCAFFMGLQR G QE QQFDIRG+V+EF+ +NMYMFW+PGM++ VSH+RR+Q+
Sbjct: 433 KFRHCAFFMGLQRAEGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVYVSHVRRRQL 492
Query: 302 PPYVFPEGYKRTRHPRLASQQ-RSSENGNEYQTGSGL----KRKKDPESVDQ--DGPEKR 354
P +VFP+GYKR R R +QQ R G + KRK D E++D + EKR
Sbjct: 493 PSFVFPKGYKRPRQSRHQNQQCREPGEGVVGSLSDSVDGYAKRKNDNETMDTRPEKREKR 552
Query: 355 QSISPQKQDSLSP 367
S SP D++SP
Sbjct: 553 ASRSPHSLDAVSP 565
>gi|125555729|gb|EAZ01335.1| hypothetical protein OsI_23369 [Oryza sativa Indica Group]
Length = 760
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 295/533 (55%), Positives = 341/533 (63%), Gaps = 69/533 (12%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLR-CLKFWAKRRGVYSNVTGFLGG 60
SVL DVDE TVRSLNGCRVADQIL+LVPNVE + CL + VTGFLGG
Sbjct: 189 SVLYDVDEVTVRSLNGCRVADQILRLVPNVEDSSLMMSICLMVELSNN---AKVTGFLGG 245
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNR 120
VNWALLVARVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLCAI+E ELGF VWDPRK
Sbjct: 246 VNWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYH 305
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
RD++HHMPIITPAYPCMNSSYNVSTSTLRVMM+QFQ+GN IC+E++++KA WSALFEP+
Sbjct: 306 RDRSHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQ 365
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
FFE+Y+NYLQVDI+A + +DL WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S
Sbjct: 366 FFEAYKNYLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPS 425
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 300
+ CAHCAFFMGL RK G +QEGQQFDIRG+V+EF+ I MY +W+PGME+ VSH+RRKQ
Sbjct: 426 RQCAHCAFFMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQ 485
Query: 301 IPPYVFPEGYKRTR------HPRLASQQRSSENGNEYQTGSGL-KRKKDPESVDQDGPE- 352
IP YVFPEGYKR R HP+ S + E+G ++ G KRK D V P
Sbjct: 486 IPSYVFPEGYKRPRPSRHINHPQ-QSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGR 544
Query: 353 --KRQSISPQKQDSLSPDHLAPSSVRSGT------GSNVEPV------IPDKRVLNQEIA 398
KR SISP S+SP H SS SG S PV + LN +A
Sbjct: 545 SVKRASISP----SISPVHQKTSSPPSGNIADASGASGGSPVSLANGNLEQANCLNSPLA 600
Query: 399 E------------------------------GGDVSNSSVITSVTSEVGSCEDVGNESVA 428
G ++ N + T S E V +E V
Sbjct: 601 SEKSLDSVTSGSKCVGVEAVCPSDAKEHDNCGSNMKNCTTTTVAVSLKRVAEKVVSELVG 660
Query: 429 GSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELEL 481
S G N S E + D A L+EN H GNG Q + EELE+
Sbjct: 661 SESLGGNKSGE----LLERAEDMGSA----LVENVHFGGNGVVQTGLPEELEI 705
>gi|125597568|gb|EAZ37348.1| hypothetical protein OsJ_21686 [Oryza sativa Japonica Group]
Length = 761
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 295/534 (55%), Positives = 341/534 (63%), Gaps = 70/534 (13%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLR-CLKFWAKRRGVYSNVTGFLGG 60
SVL DVDE TVRSLNGCRVADQIL+LVPNVE + CL + VTGFLGG
Sbjct: 189 SVLYDVDEVTVRSLNGCRVADQILRLVPNVEDSSLMMSICLMVELSNN---AKVTGFLGG 245
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNR 120
VNWALLVARVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLCAI+E ELGF VWDPRK
Sbjct: 246 VNWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYH 305
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
RD++HHMPIITPAYPCMNSSYNVSTSTLRVMM+QFQ+GN IC+E++++KA WSALFEP+
Sbjct: 306 RDRSHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQ 365
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
FFE+Y+NYLQVDI+A + +DL WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S
Sbjct: 366 FFEAYKNYLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPS 425
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 300
+ CAHCAFFMGL RK G +QEGQQFDIRG+V+EF+ I MY +W+PGME+ VSH+RRKQ
Sbjct: 426 RQCAHCAFFMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQ 485
Query: 301 IPPYVFPEGYKRTR------HPRLASQQRSSENGNEYQTGSGL-KRKKDPESVDQDGPE- 352
IP YVFPEGYKR R HP+ S + E+G ++ G KRK D V P
Sbjct: 486 IPSYVFPEGYKRPRPSRHINHPQ-QSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGR 544
Query: 353 --KRQSISPQKQDSLSPDHLAPSSVRSGT------GSNVEPV------IPDKRVLNQEIA 398
KR SISP S+SP H SS SG S PV + LN +A
Sbjct: 545 SVKRASISP----SISPVHQKTSSPPSGNIADASGASGGSPVSLANGNLEQANCLNSPLA 600
Query: 399 E-------------------------------GGDVSNSSVITSVTSEVGSCEDVGNESV 427
G ++ N + T S E V +E V
Sbjct: 601 SEKSLDSVTSGSKCVGVEAVCPSDATKEHDNCGSNMKNCTTTTVAVSLKRVAEKVVSELV 660
Query: 428 AGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELEL 481
S G N S E + D A L+EN H GNG Q + EELE+
Sbjct: 661 GSESLGGNKSGE----LLERAEDMGSA----LVENVHFGGNGVVQTGLPEELEI 706
>gi|413926072|gb|AFW66004.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
Length = 680
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 267/446 (59%), Positives = 324/446 (72%), Gaps = 21/446 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDE TVRSLNGCRVADQIL+LVPNVE+F TTLRCLK+WAKRRGVYSN+TGFLGGV
Sbjct: 189 SVLCDVDEATVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGV 248
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLCAI+ +LGFS+WDPRKN R
Sbjct: 249 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPR 308
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVSTSTLRV+M+QFQ+GN +C+E+ELNKA W+ALFEP+ F
Sbjct: 309 DRNHLMPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKVCQEIELNKANWNALFEPFHF 368
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+YR +L VDIVA + DDL WKGW+ESRLRQLTL IERDT G LQCHPYP EY D +
Sbjct: 369 FEAYRKFLVVDIVAEDDDDLRLWKGWIESRLRQLTLKIERDTKGILQCHPYPCEYSDPTI 428
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
CAHCAF+MGL RK G + + GQQFDIRG+V+EF I MY WKPGM++ V+H+ R+Q+
Sbjct: 429 ECAHCAFYMGLSRKEG-LKKRGQQFDIRGTVDEFMREIGMYSLWKPGMDLAVTHVHREQV 487
Query: 302 PPYVFPEGYKRTRHPRLASQQRSSENGNEYQ--TGSGLKRKKDPES---VDQDGPEKRQS 356
P YVF +GYK+ A+QQ S+ + S LKRK + VD KR S
Sbjct: 488 PSYVFEQGYKKPCPTMHANQQEQSDGDGTFSPYLESQLKRKYISDGDGHVDLCKSVKRAS 547
Query: 357 ISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDK--RVLNQEIAEGGDVSNSSVITSVTS 414
+SP +P HL G++V V+ D + ++ + G S+S ++
Sbjct: 548 VSPPGVG--TPPHL---------GNSVSNVVCDSPVKFVSSVVCSGAHASSSHDDINIEQ 596
Query: 415 EVGSCEDVGNE--SVAGSSEGNNGSV 438
+ G+E S +G+S G+V
Sbjct: 597 AQLTTSPYGSEDTSASGTSCAAVGAV 622
>gi|242061050|ref|XP_002451814.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
gi|241931645|gb|EES04790.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
Length = 672
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 248/363 (68%), Positives = 289/363 (79%), Gaps = 6/363 (1%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDE TVRSLNGCRVADQIL+LVPNVE+F TTLRCLK+WAKRRGVYSN+TGFLGGV
Sbjct: 189 SVLCDVDEATVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGV 248
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLCAI+ +LGFS+WDPRKN R
Sbjct: 249 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPR 308
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS+STLRV+M+QFQ+GN IC+E+ELNKA W+ALFEP+ F
Sbjct: 309 DRNHLMPIITPAYPCMNSSYNVSSSTLRVIMEQFQFGNKICQEIELNKANWNALFEPFHF 368
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+YR +L VDIVA N DDL WKGW+ESRLRQLTL I+RDT G LQCHPYP EY D +
Sbjct: 369 FEAYRKFLVVDIVAENDDDLRLWKGWIESRLRQLTLKIDRDTKGILQCHPYPCEYSDPTI 428
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
CAHCAF+MGL RK G + GQQFDIRG+V+EF I MY W PGM++ V+H++R+Q+
Sbjct: 429 ECAHCAFYMGLSRKEGS-KKRGQQFDIRGTVDEFMREIGMYSLWMPGMDLAVTHVQREQV 487
Query: 302 PPYVFPEGYKRTRHPRLASQQRSSENGNEYQ--TGSGLKRKKDPES---VDQDGPEKRQS 356
P YVF +GYK+ A+QQ S+ S LKRK D + V+ K S
Sbjct: 488 PSYVFEQGYKKPCPTMHANQQEQSDGDVTLSPYLDSQLKRKYDSDGDGHVELHKSVKWAS 547
Query: 357 ISP 359
+SP
Sbjct: 548 VSP 550
>gi|302780986|ref|XP_002972267.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
gi|300159734|gb|EFJ26353.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
Length = 548
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 238/352 (67%), Positives = 284/352 (80%), Gaps = 12/352 (3%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++DEP+VRSLNGCRV DQIL+LVPN+EHF TTLRC+K WA++RGVYSNVTGFLGGV
Sbjct: 179 SILRNLDEPSVRSLNGCRVTDQILRLVPNIEHFRTTLRCMKLWARKRGVYSNVTGFLGGV 238
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQLYPNA+PSMLVSRFFRVYT WRWPNPVMLC I+E LG SVWDPRKN R
Sbjct: 239 NWALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPR 298
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+TH MPIITPAYPCMNSSYNVS+STLRVM+++F N ICE +E+NKA+WSALFEPY F
Sbjct: 299 DRTHQMPIITPAYPCMNSSYNVSSSTLRVMVEEFSRANGICEVIEMNKAEWSALFEPYAF 358
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLM------IERDTYGKLQCHPYPHE 235
F++Y+NYLQ+D+ AA+ DDL WKGWVESRLRQLTL IE+ TYG LQCHP+P +
Sbjct: 359 FDAYKNYLQIDVFAADNDDLRRWKGWVESRLRQLTLKVGLDREIEKHTYGMLQCHPHPCD 418
Query: 236 YVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSH 295
+VD SK HCAFFMGLQ++ G QEGQQFDIR +VEEF+ S+ Y WK GM+I VSH
Sbjct: 419 FVDESKEGKHCAFFMGLQKRQGLPSQEGQQFDIRLTVEEFRQSVTGYQLWKEGMDIAVSH 478
Query: 296 IRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGN------EYQTGSGLKRKK 341
+RR+QIP YVFP G K R P+L+S +++ E G+ Y +G +R K
Sbjct: 479 VRRRQIPAYVFPGGTKPARPPKLSSSRKAREAGSIRGCNTSYVIEAGCERSK 530
>gi|302804859|ref|XP_002984181.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
gi|300148030|gb|EFJ14691.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
Length = 496
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 230/318 (72%), Positives = 270/318 (84%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++DEP+VRSLNGCRV DQIL+LVPN+EHF TTLRC+K WA++RGVYSNVTGFLGGV
Sbjct: 179 SILRNLDEPSVRSLNGCRVTDQILRLVPNIEHFRTTLRCMKLWARKRGVYSNVTGFLGGV 238
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQLYPNA+PSMLVSRFFRVYT WRWPNPVMLC I+E LG SVWDPRKN R
Sbjct: 239 NWALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPR 298
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+TH MPIITPAYPCMNSSYNVS+STLRVM+++F N ICE +E+NKA+WSALFEPY F
Sbjct: 299 DRTHQMPIITPAYPCMNSSYNVSSSTLRVMVEEFSRANGICEVIEMNKAEWSALFEPYAF 358
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F++Y+NYLQ+D+ AA+ DDL WKGWVESRLRQLTL IE+ TYG LQCHP+P ++VD SK
Sbjct: 359 FDAYKNYLQIDVFAADNDDLRRWKGWVESRLRQLTLKIEKHTYGMLQCHPHPCDFVDESK 418
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
HCAFFMGLQ++ G QEGQQFDIR +VEEF+ S+ Y WK GM+I VSH+RR+QI
Sbjct: 419 EGKHCAFFMGLQKRQGLPSQEGQQFDIRLTVEEFRQSVTGYQLWKEGMDIAVSHVRRRQI 478
Query: 302 PPYVFPEGYKRTRHPRLA 319
P YVFP G K R P++
Sbjct: 479 PAYVFPGGTKPARPPKVT 496
>gi|356531174|ref|XP_003534153.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 757
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 257/475 (54%), Positives = 318/475 (66%), Gaps = 35/475 (7%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L +VDE TV SLNGCRV DQ+L+LVPN++ F TTLRC++FWAKRRGVYSNV GFLGG+
Sbjct: 185 SILQNVDEQTVLSLNGCRVTDQVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGFLGGI 244
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
N ALLVAR+CQLYPNA+P+MLVSRFFRVYT WRWPNPVMLCAI+E LG SVWDPR+N +
Sbjct: 245 NLALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPK 304
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNS+YNV++STLRVM D+F+ G+ ICE +E +KA W LFEPY F
Sbjct: 305 DRYHLMPIITPAYPCMNSTYNVTSSTLRVMSDEFRRGSEICEAMEASKADWDTLFEPYPF 364
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FESY+NYLQ+DI A NADDL WKGWVESRLRQLTL IER TYG LQCHP+P E+ D S+
Sbjct: 365 FESYKNYLQIDITAENADDLRQWKGWVESRLRQLTLKIERHTYGMLQCHPHPGEFSDNSR 424
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
P HC +FMGLQRK G V EG+QFDIR +VEEFK S+N Y WKPGM I VSH++R+ I
Sbjct: 425 PFHHC-YFMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYTLWKPGMNIHVSHVKRRNI 483
Query: 302 PPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPE-SVDQDGPEKRQS---- 356
P Y+FP G + T ++ ++ + S G K + V D KR+
Sbjct: 484 PNYIFPGGVRPTFPSKVTAENKQSSKSRVPGHGQAEKPQGGKTVVVGADDVRKRKRSEDI 543
Query: 357 ISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGG---------DVSNSS 407
+ ++S SP LAP S R +N++I+ D S +
Sbjct: 544 MDNNPRNSKSPVSLAPPS----------------REVNEDISPISASSSCSMKFDESEVN 587
Query: 408 VITSVTSEVGSCEDVGNESVAGSSEGNNGSVEGSN--NPVSSQSDCCDADSQSLL 460
I SE C + E +G S G NGSV + NPV + +D ++ + L
Sbjct: 588 SIGGQKSE-KPCLNSPGEIPSGDS-GTNGSVTNNQQVNPVLAAADTSNSKEEEKL 640
>gi|255567792|ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus communis]
gi|223535837|gb|EEF37498.1| Poly(A) polymerase alpha, putative [Ricinus communis]
Length = 770
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/383 (60%), Positives = 287/383 (74%), Gaps = 12/383 (3%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L + DE TVRSLNGCRV DQIL+LVPN+++F TTLRC++FWAKRRGVYSNV+GFLGG+
Sbjct: 187 SILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGI 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQL+PNA+P+MLVSRFFRVYT WRWPNPVMLCAI+E LG VWDPR+N +
Sbjct: 247 NWALLVARICQLFPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQVWDPRRNPK 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP MNSSYNVS STLR+M ++FQ GN ICE +E +KA W+ LFE + F
Sbjct: 307 DRYHLMPIITPAYPSMNSSYNVSASTLRIMSEEFQRGNEICEAMEASKADWNTLFESFSF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F++Y+NYLQ+DI A N DDL WKGWVESRLRQLTL IER T+ LQCHP+P E+ D S+
Sbjct: 367 FDAYKNYLQIDIGAENEDDLRKWKGWVESRLRQLTLKIERHTFNMLQCHPHPGEFTDKSR 426
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
P HC++FMGLQRK G EG+QFDIR +VEEFK+S+NMY WKPGMEI V+H++R+ I
Sbjct: 427 PL-HCSYFMGLQRKQGVPANEGEQFDIRITVEEFKISVNMYTSWKPGMEIHVTHVKRRNI 485
Query: 302 PPYVFPEGYKRTRHPRLA--SQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISP 359
P +VFP G + +R + S++ S+E E G G+ + D G KR +
Sbjct: 486 PSFVFPGGIRPSRPSKTTWDSKRSSAEKSGE---GKGVS-----DGSDDKGKRKRIDDNV 537
Query: 360 QKQDSLS-PDHLAPSSVRSGTGS 381
++ PD +P S GS
Sbjct: 538 ANATKIAKPDSTSPLSGEVNNGS 560
>gi|58220773|gb|AAW68018.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 652
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 250/375 (66%), Positives = 294/375 (78%), Gaps = 13/375 (3%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDE TVRSLNGCRVADQIL+LVPN E F TLRCLK+WA+RRGVYSNVTG LGGV
Sbjct: 160 SVLCDVDEATVRSLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGV 219
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-LGFSVWDPRKNR 120
+WALLVARVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLCAI+ + LGF+VWDPRKN
Sbjct: 220 SWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNP 279
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
RD++H MPIITPAYPCMNSSYNVSTSTLRV+M+QFQ+GN IC+E+ELNKA WS+LFEP+
Sbjct: 280 RDRSHVMPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQ 339
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
FFE+Y YL VDIVA + DDL WKGW+ESRLRQLTL IERDT G LQCHP P EY D S
Sbjct: 340 FFEAYTRYLVVDIVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPS 399
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 300
CAHCAF+MGL RK G ++ GQ+FDIRG+V+EF I MY WK GM++ V+H+R+K+
Sbjct: 400 IQCAHCAFYMGLSRKEGMKIR-GQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKE 458
Query: 301 IPPYVFPEGYKRTRHPR--LASQQ-RSSENGNEYQTGS-----GLKRKKDP---ESVDQD 349
IP YVF +G ++TR P A QQ RS +N +E T + LKRK D VD
Sbjct: 459 IPLYVFEQGCQKTRPPTPICAEQQDRSGKNDSEVCTTTVSLVGQLKRKYDSVGGADVDSF 518
Query: 350 GPEKRQSISPQKQDS 364
+R S+SP +++
Sbjct: 519 KSVRRASVSPACEEA 533
>gi|359490984|ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 757
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 220/322 (68%), Positives = 263/322 (81%), Gaps = 1/322 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L + DE TVRSLNGCRV DQIL+LVPN+++F TTLR ++FWAKRRGVYSNV GFLGG+
Sbjct: 185 SILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGI 244
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E LG VWDPRK +
Sbjct: 245 NWALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPK 304
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS+STLR+M ++F+ GN I E +E NKA W+ L EPY F
Sbjct: 305 DRFHLMPIITPAYPCMNSSYNVSSSTLRIMSEEFKRGNEISEVMEANKADWATLCEPYPF 364
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQ++I A NADDL WKGWVESRLRQLTL IER TY LQCHP+P ++ D S+
Sbjct: 365 FEAYKNYLQIEIAAENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSR 424
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
P HC +FMGLQRK G EG+QFDIR +V+EFK S+ MY WKPGMEI V H+RR+ I
Sbjct: 425 PF-HCCYFMGLQRKQGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNI 483
Query: 302 PPYVFPEGYKRTRHPRLASQQR 323
P +VFP G + +R ++AS++R
Sbjct: 484 PNFVFPGGVRPSRPTKVASERR 505
>gi|356522834|ref|XP_003530048.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 757
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/500 (51%), Positives = 321/500 (64%), Gaps = 35/500 (7%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L VDE TV SLNGCRV DQ+L+LVPN++ F TTLRC++FWAKRRGVYSNV GFLGG+
Sbjct: 185 SILQSVDEQTVLSLNGCRVTDQVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGFLGGI 244
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
N ALLVAR+CQLYPNA+P MLVSRFFRVYT WRWPNPVMLCAI+E LG VWDPR+N +
Sbjct: 245 NLALLVARICQLYPNALPDMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLPVWDPRRNPK 304
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITP YPCMNS+YNV++STLRVM D+F+ G+ ICE +E +KA W LFEPY F
Sbjct: 305 DRYHLMPIITPVYPCMNSTYNVTSSTLRVMSDEFRRGSEICEAMEASKADWDTLFEPYPF 364
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FESY+NYLQ+DI A NADDL WKGWV SRLRQLTL IER TYG LQCHP+P E+ D S+
Sbjct: 365 FESYKNYLQIDITAENADDLRQWKGWVGSRLRQLTLKIERHTYGMLQCHPHPGEFSDNSR 424
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
P HC +FMGLQRK G V EG+QFDIR +VEEFK S+N Y WKPGM+I VSH++R I
Sbjct: 425 PFHHC-YFMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYTLWKPGMDIHVSHVKRSNI 483
Query: 302 PPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPE-----SVDQDGPEKRQ- 355
P Y+FP G + T ++ ++ + S SG + + P+ +V D KR+
Sbjct: 484 PNYIFPGGVRPTFPSKVTAENKQSSKSR----ASGHGQTEKPQGGKAVAVGADDVRKRKR 539
Query: 356 ---SISPQKQDSLSPDHLAPSS--VRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVIT 410
++ ++S SP L P S V + E+ G + +
Sbjct: 540 SEDNMDNNPRNSRSPVSLPPPSREVHEDISPISASSSCSMKFDESEVNSIGGQKSEKLCL 599
Query: 411 SVTSEVGSCEDVGNESVAGSSEGNNGSVEGSN--NPVSSQSDCCDADSQSLLENRHL--- 465
E+ S + G NGSV + NPV + +D ++ + L +
Sbjct: 600 KSPGEIPSGDS-----------GTNGSVTSNQQVNPVLAAADTSNSKEEEKLAIEKIMSG 648
Query: 466 --DGNGAFQDRVHEELELNA 483
D + AFQ+ +ELE N
Sbjct: 649 LYDAHQAFQEE-PKELEDNT 667
>gi|148910690|gb|ABR18412.1| unknown [Picea sitchensis]
Length = 712
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 221/317 (69%), Positives = 257/317 (81%), Gaps = 1/317 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L + DE TVRSLNGCRV DQIL+LVPN+++F TTLRC+K WAKRRGVYSNV GFLGGV
Sbjct: 185 SILRNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMKLWAKRRGVYSNVAGFLGGV 244
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQLYPNA+PSMLV RFFRVYT WRWPNPVMLCAI+E LG VWDPRKN R
Sbjct: 245 NWALLVARICQLYPNALPSMLVCRFFRVYTQWRWPNPVMLCAIEEGPLGLPVWDPRKNPR 304
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS+STLRVM ++FQ N ICEE+ELNK W+ LFE Y F
Sbjct: 305 DRLHQMPIITPAYPCMNSSYNVSSSTLRVMTEEFQRSNQICEELELNKVCWNILFETYPF 364
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYL++DI A ADDL WKGW ESRLR LTL IER T+G LQCHP+P ++ D +
Sbjct: 365 FEAYKNYLEIDISAEGADDLRKWKGWTESRLRLLTLKIERQTFGMLQCHPHPDDFSDPQR 424
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
P HC FFMGLQRK G +QEG+QFDIR +V+EF+ S+ MY WK GMEI VSHIRR+ I
Sbjct: 425 P-YHCCFFMGLQRKQGMPIQEGEQFDIRVTVDEFRHSVKMYTLWKQGMEINVSHIRRRNI 483
Query: 302 PPYVFPEGYKRTRHPRL 318
P +VFP G + R ++
Sbjct: 484 PLFVFPGGVRPPRTTKM 500
>gi|297850192|ref|XP_002892977.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297338819|gb|EFH69236.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 716
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 213/310 (68%), Positives = 254/310 (81%), Gaps = 1/310 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L + DE TVRSLNGCRV DQIL+LVPN+++F TTLRC++FWAKRRGVYSNV+GFLGG+
Sbjct: 180 SILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGI 239
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQLYPNA+P+ML SRFFRVY WRWPNPV+LC++DE G VWDPR+N +
Sbjct: 240 NWALLVARICQLYPNALPNMLASRFFRVYNQWRWPNPVLLCSMDEGSFGLQVWDPRRNPK 299
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLR+M +FQ G ICE +E NKA W LFEP+ F
Sbjct: 300 DRLHIMPIITPAYPCMNSSYNVSASTLRIMTGEFQRGKEICEAMEANKADWDTLFEPFAF 359
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQ+DI AAN +DL WKGWVESRLRQLTL IER TY LQCHP+PH++ D S+
Sbjct: 360 FEAYKNYLQIDISAANVNDLRKWKGWVESRLRQLTLKIERHTYDMLQCHPHPHDFQDASR 419
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
P HC++FMGLQRK G EG+QFDIR +VEEFK ++N Y W PGMEI VSHI+R+ +
Sbjct: 420 PL-HCSYFMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVSHIKRRSL 478
Query: 302 PPYVFPEGYK 311
P YVFP G +
Sbjct: 479 PNYVFPGGVR 488
>gi|359484334|ref|XP_002280350.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
gi|297738746|emb|CBI27991.3| unnamed protein product [Vitis vinifera]
Length = 598
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 236/348 (67%), Positives = 271/348 (77%), Gaps = 16/348 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L + DEPTVRSL+GCRVADQIL+LVPNVEHF TTLRCLKFWAKRRGVYSNVTGFLGGV
Sbjct: 180 SILYEADEPTVRSLSGCRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGV 239
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
N ALLVARVCQLYPNA PSMLVSRFFRVYT W WPNPVMLC I++ ELGF VWDPR+N
Sbjct: 240 NLALLVARVCQLYPNANPSMLVSRFFRVYTQWHWPNPVMLCPIEDKELGFPVWDPRRNPL 299
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ HHMPIITPAYP MNSSY+VSTSTL MM QF N IC ++ELNK+ W ALFEP+LF
Sbjct: 300 DRNHHMPIITPAYPNMNSSYSVSTSTLEAMMKQFHTANKICNDIELNKSSWGALFEPFLF 359
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F SY+NYLQVDI A +ADDL AWKGWVESRLRQLTL +ER T GKL C P P EYVDTS+
Sbjct: 360 FRSYQNYLQVDITATDADDLRAWKGWVESRLRQLTLKVERCTIGKLLCVPCPREYVDTSR 419
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI-NMYMFWKPGMEICVSHIRRKQ 300
C HC +FMGL++KPG V+ G+ DIR + +EFK I NM+ FW PGMEI VSH+ + Q
Sbjct: 420 QCCHCTYFMGLRKKPG--VEVGEVIDIRVATQEFKEEIVNMFSFWTPGMEIHVSHVLKNQ 477
Query: 301 IPPYVFPEGY-KRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVD 347
+P YVFP+ Y KR++ + +QQ + KRK + E VD
Sbjct: 478 LPSYVFPDEYRKRSQSSKSINQQHQN------------KRKINSEMVD 513
>gi|49388677|dbj|BAD25861.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
gi|125581374|gb|EAZ22305.1| hypothetical protein OsJ_05959 [Oryza sativa Japonica Group]
Length = 610
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 248/375 (66%), Positives = 293/375 (78%), Gaps = 13/375 (3%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDE TVRSLNGCRVADQIL+LVPN E F TLRCLK+WA+RRGVYSNVTG LGGV
Sbjct: 192 SVLCDVDEATVRSLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGV 251
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-LGFSVWDPRKNR 120
+WALLVARVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLCAI+ + LGF+VWDPRKN
Sbjct: 252 SWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNP 311
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
RD++H MPIITPAYPCMNSSYNVSTSTLRV+M+QFQ+GN IC+E+ELNKA WS+LFEP+
Sbjct: 312 RDRSHVMPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQ 371
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
FFE+Y YL VDIVA + DDL WKGW+ESRLRQLTL IERDT G LQCHP P EY D S
Sbjct: 372 FFEAYTRYLVVDIVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPS 431
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 300
CAHCAF+MGL RK G ++ GQ+FDIRG+V+EF I MY WK GM++ V+H+R+K+
Sbjct: 432 IQCAHCAFYMGLSRKEGMKIR-GQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKE 490
Query: 301 IPPYVFPEGYKRTRHPR--LASQQ-RSSENGNEYQTGSG-----LKRKKDP---ESVDQD 349
IP YVF +G ++TR P A QQ +S +N +E T + LKRK VD
Sbjct: 491 IPLYVFEQGCQKTRPPTPICAEQQDQSDKNDSEVCTTTASLVGQLKRKYHSVGGADVDSF 550
Query: 350 GPEKRQSISPQKQDS 364
+R S+SP +++
Sbjct: 551 KSVRRASVSPACEEA 565
>gi|224135441|ref|XP_002322074.1| predicted protein [Populus trichocarpa]
gi|222869070|gb|EEF06201.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 222/329 (67%), Positives = 272/329 (82%), Gaps = 5/329 (1%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVE---HFCTTLRCLKFWAKRRGVYSNVTGFL 58
S+L++ DE TVRSLNGCRV DQIL+LVPN++ +F TTLRC++FWAKRRGVYSNV+GFL
Sbjct: 176 SMLHNADEQTVRSLNGCRVTDQILRLVPNIQAMQNFRTTLRCMRFWAKRRGVYSNVSGFL 235
Query: 59 GGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRK 118
GG+NWALLVAR+CQL+PNA+P+MLVSRFFRVYT WRWPNPVMLCAI+E LG SVWDPR+
Sbjct: 236 GGINWALLVARICQLFPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRR 295
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP 178
N +D+ H MPIITPAYP MNSSYNVS+STLR+M ++FQ GN ICE +E++KA+W LFEP
Sbjct: 296 NPKDRYHLMPIITPAYPSMNSSYNVSSSTLRIMTEEFQRGNEICEAMEVSKAEWDTLFEP 355
Query: 179 YLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 238
+ FFE+Y+NYLQ+DI A N DDL WKGWVESRLRQLTL IER TY LQCHP+P E+ D
Sbjct: 356 FSFFEAYKNYLQIDISAENEDDLRQWKGWVESRLRQLTLKIERHTYNMLQCHPHPGEFSD 415
Query: 239 TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRR 298
S+P HC++FMGLQRK G V EG+QFDIR +V+EFK S+NMY WKPGMEI V+H+++
Sbjct: 416 KSRPL-HCSYFMGLQRKQGVPVNEGEQFDIRITVDEFKNSVNMYTLWKPGMEIRVTHVKK 474
Query: 299 KQIPPYVFPEGYKRTRHPRLA-SQQRSSE 326
+ IP +VFP G + +R + +RSSE
Sbjct: 475 RNIPNFVFPSGVRPSRPSKATWDGRRSSE 503
>gi|297598868|ref|NP_001046352.2| Os02g0227400 [Oryza sativa Japonica Group]
gi|255670737|dbj|BAF08266.2| Os02g0227400, partial [Oryza sativa Japonica Group]
Length = 602
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 248/375 (66%), Positives = 293/375 (78%), Gaps = 13/375 (3%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDE TVRSLNGCRVADQIL+LVPN E F TLRCLK+WA+RRGVYSNVTG LGGV
Sbjct: 184 SVLCDVDEATVRSLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGV 243
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-LGFSVWDPRKNR 120
+WALLVARVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLCAI+ + LGF+VWDPRKN
Sbjct: 244 SWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNP 303
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
RD++H MPIITPAYPCMNSSYNVSTSTLRV+M+QFQ+GN IC+E+ELNKA WS+LFEP+
Sbjct: 304 RDRSHVMPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQ 363
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
FFE+Y YL VDIVA + DDL WKGW+ESRLRQLTL IERDT G LQCHP P EY D S
Sbjct: 364 FFEAYTRYLVVDIVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPS 423
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 300
CAHCAF+MGL RK G ++ GQ+FDIRG+V+EF I MY WK GM++ V+H+R+K+
Sbjct: 424 IQCAHCAFYMGLSRKEGMKIR-GQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKE 482
Query: 301 IPPYVFPEGYKRTRHPR--LASQQ-RSSENGNEYQTGSG-----LKRKKDP---ESVDQD 349
IP YVF +G ++TR P A QQ +S +N +E T + LKRK VD
Sbjct: 483 IPLYVFEQGCQKTRPPTPICAEQQDQSDKNDSEVCTTTASLVGQLKRKYHSVGGADVDSF 542
Query: 350 GPEKRQSISPQKQDS 364
+R S+SP +++
Sbjct: 543 KSVRRASVSPACEEA 557
>gi|147795652|emb|CAN61208.1| hypothetical protein VITISV_015447 [Vitis vinifera]
Length = 1097
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 220/322 (68%), Positives = 262/322 (81%), Gaps = 1/322 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L + DE TVRSLNGCRV DQIL+LVPN+++F TTLR ++FWAKRRGVYSNV GFLGG+
Sbjct: 365 SILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGI 424
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E LG VWDPRK +
Sbjct: 425 NWALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPK 484
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS+STLR+M ++F+ GN I E +E NKA W L EPY F
Sbjct: 485 DRFHLMPIITPAYPCMNSSYNVSSSTLRIMSEEFKRGNEISEVMEANKADWXTLCEPYPF 544
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQ++I A NADDL WKGWVESRLRQLTL IER TY LQCHP+P ++ D S+
Sbjct: 545 FEAYKNYLQIEIAAENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSR 604
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
P HC +FMGLQRK G EG+QFDIR +V+EFK S+ MY WKPGMEI V H+RR+ I
Sbjct: 605 PF-HCCYFMGLQRKQGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNI 663
Query: 302 PPYVFPEGYKRTRHPRLASQQR 323
P +VFP G + +R ++AS++R
Sbjct: 664 PNFVFPGGVRPSRPTKVASERR 685
>gi|302770018|ref|XP_002968428.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
gi|300164072|gb|EFJ30682.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
Length = 534
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 222/328 (67%), Positives = 268/328 (81%), Gaps = 2/328 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S++ ++DE +V SLNGCRV DQIL+LVPN++HF TTLRC+K+WAKRRGVYSNVTGFLGG+
Sbjct: 167 SIMQNLDEQSVLSLNGCRVTDQILRLVPNIQHFRTTLRCMKYWAKRRGVYSNVTGFLGGI 226
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-AELGF-SVWDPRKN 119
NWALLVAR+CQLYPNAVPS LVSRFFRVYT WRWPNPVMLC I+E + LG VWDPRKN
Sbjct: 227 NWALLVARICQLYPNAVPSTLVSRFFRVYTQWRWPNPVMLCPIEERSSLGLLQVWDPRKN 286
Query: 120 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 179
RDK+H MPIITPAYPCMNSSYNVSTSTLR+M +F GN +CE++E+++A W LFE +
Sbjct: 287 PRDKSHLMPIITPAYPCMNSSYNVSTSTLRIMTQEFNRGNEVCEQLEMSRATWDLLFESF 346
Query: 180 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 239
FFE+YRNYLQ+D+VA + D WKGWVESRLRQLTL +E+DTYG LQCHP+P ++VD
Sbjct: 347 SFFEAYRNYLQIDVVAIDDCDHRCWKGWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDM 406
Query: 240 SKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRK 299
++ HCA+FMGLQRK G + EGQQFDIR +VE+FKL++ Y WKPGMEI VSH+RRK
Sbjct: 407 ARDGYHCAYFMGLQRKLGAPLHEGQQFDIRTTVEQFKLNVAAYTSWKPGMEIYVSHVRRK 466
Query: 300 QIPPYVFPEGYKRTRHPRLASQQRSSEN 327
QIP +V+P G K R R S SS++
Sbjct: 467 QIPLFVYPGGVKPARPARQHSGSPSSDS 494
>gi|125538688|gb|EAY85083.1| hypothetical protein OsI_06439 [Oryza sativa Indica Group]
Length = 683
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 247/375 (65%), Positives = 292/375 (77%), Gaps = 13/375 (3%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDE TVRSLNGCRVADQIL+LVPN E F TLRCLK+WA+RRGVYSNVTG LGGV
Sbjct: 191 SVLCDVDEATVRSLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGV 250
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-LGFSVWDPRKNR 120
+WALLVARVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLCAI+ + LGF+VWDPRKN
Sbjct: 251 SWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNP 310
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
RD++H MPIITPAYPCMNSSYNVSTSTLRV+M+QFQ+GN IC+E+ELNKA WS+LFEP+
Sbjct: 311 RDRSHVMPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQ 370
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
FFE+Y YL VDIVA + DDL WKGW+ESRLRQLTL IERDT G LQCHP P EY D S
Sbjct: 371 FFEAYTRYLVVDIVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPS 430
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 300
CAHCAF+MGL RK G ++ GQ+FDIRG+V+EF I MY WK GM++ V+H+ +K+
Sbjct: 431 IQCAHCAFYMGLSRKEGMKIR-GQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVCKKE 489
Query: 301 IPPYVFPEGYKRTRHPR--LASQQ-RSSENGNEYQTGSG-----LKRKKDP---ESVDQD 349
IP YVF +G ++TR P A QQ +S +N +E T + LKRK VD
Sbjct: 490 IPLYVFEQGCQKTRPPTPICAEQQDQSDKNDSEVCTTTASLVGQLKRKYHSVGGADVDSF 549
Query: 350 GPEKRQSISPQKQDS 364
+R S+SP +++
Sbjct: 550 KSVRRASVSPACEEA 564
>gi|302774344|ref|XP_002970589.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
gi|300162105|gb|EFJ28719.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
Length = 534
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 220/328 (67%), Positives = 267/328 (81%), Gaps = 2/328 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S++ ++DE +V SLNGCRV DQIL+LVPN++HF TTLRC+K+WAKRRGVYSNVTGFLGG+
Sbjct: 167 SIMQNLDEQSVLSLNGCRVTDQILRLVPNIQHFRTTLRCMKYWAKRRGVYSNVTGFLGGI 226
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-AELGF-SVWDPRKN 119
NWALLVAR+CQLYPNAVPS L+SRFFRVYT WRWPNPVMLC I+E + LG VWDPRKN
Sbjct: 227 NWALLVARICQLYPNAVPSTLISRFFRVYTQWRWPNPVMLCPIEERSSLGLLQVWDPRKN 286
Query: 120 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 179
RDK+H MPIITPAYPCMNSSYNVSTSTLR+M +F GN +CE++E+++A W LFE +
Sbjct: 287 PRDKSHLMPIITPAYPCMNSSYNVSTSTLRIMTQEFNRGNEVCEQLEMSRATWDLLFESF 346
Query: 180 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 239
FFE+YRNYLQ+D+VA + D WKGWVESRLRQLTL +E+DTYG LQCHP+P ++VD
Sbjct: 347 SFFEAYRNYLQIDVVAIDDCDHRCWKGWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDM 406
Query: 240 SKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRK 299
++ HCA+FMGLQRK G + EGQQFDIR +VE+FKL++ Y WK GMEI VSH+RRK
Sbjct: 407 ARDGYHCAYFMGLQRKLGAPLHEGQQFDIRTTVEQFKLNVAAYTSWKQGMEIYVSHVRRK 466
Query: 300 QIPPYVFPEGYKRTRHPRLASQQRSSEN 327
QIP +V+P G K R R S SS++
Sbjct: 467 QIPLFVYPGGVKPARPARQHSGSPSSDS 494
>gi|357500153|ref|XP_003620365.1| Poly(A) polymerase [Medicago truncatula]
gi|355495380|gb|AES76583.1| Poly(A) polymerase [Medicago truncatula]
Length = 752
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 223/354 (62%), Positives = 271/354 (76%), Gaps = 15/354 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L +VDE TV SLNGCRV DQ+L+LVPN+++F TTLR ++FWAKRRGVYSNV GFLGG+
Sbjct: 185 SILQNVDEQTVLSLNGCRVTDQVLRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGI 244
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
N ALLV R+CQLYPNA+P+MLVSRFFRVYT WRWPNPVMLCAI+E LG SVWDPR+N R
Sbjct: 245 NLALLVGRICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPR 304
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNS+YNV+TSTLR+M D+F+ G ICE +E +KA W LFEPY F
Sbjct: 305 DRYHLMPIITPAYPCMNSTYNVTTSTLRIMSDEFKRGTEICEAMEASKADWDTLFEPYPF 364
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQ+DI A N DDL WKGWVESRLRQLTL IE+ TYG LQCHPYP E+ D S+
Sbjct: 365 FEAYKNYLQIDITAENPDDLRQWKGWVESRLRQLTLKIEKYTYGMLQCHPYPGEFSDKSR 424
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
C +FMGLQRK G V EG+QFDIR +VEEFK ++N Y WKPGM+I VSH++R+ I
Sbjct: 425 SFHQC-YFMGLQRKQGVPVSEGEQFDIRQTVEEFKHNVNAYTAWKPGMDIRVSHVKRRNI 483
Query: 302 PPYVFPEGY------------KRTRHPRLASQQRS--SENGNEYQTGSGLKRKK 341
P ++FP G +R+ R+A Q +S S+ G G+ +RK+
Sbjct: 484 PNFIFPGGVRPSVPSRVNGENRRSSKSRVAGQSQSEKSQGGKAVVLGADDERKR 537
>gi|297734259|emb|CBI15506.3| unnamed protein product [Vitis vinifera]
Length = 651
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 217/309 (70%), Positives = 254/309 (82%), Gaps = 1/309 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L + DE TVRSLNGCRV DQIL+LVPN+++F TTLR ++FWAKRRGVYSNV GFLGG+
Sbjct: 185 SILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGI 244
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E LG VWDPRK +
Sbjct: 245 NWALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPK 304
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS+STLR+M ++F+ GN I E +E NKA W+ L EPY F
Sbjct: 305 DRFHLMPIITPAYPCMNSSYNVSSSTLRIMSEEFKRGNEISEVMEANKADWATLCEPYPF 364
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQ++I A NADDL WKGWVESRLRQLTL IER TY LQCHP+P ++ D S+
Sbjct: 365 FEAYKNYLQIEIAAENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSR 424
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
P HC +FMGLQRK G EG+QFDIR +V+EFK S+ MY WKPGMEI V H+RR+ I
Sbjct: 425 PF-HCCYFMGLQRKQGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNI 483
Query: 302 PPYVFPEGY 310
P +VFP GY
Sbjct: 484 PNFVFPGGY 492
>gi|449439435|ref|XP_004137491.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
gi|449521033|ref|XP_004167536.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 748
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/469 (52%), Positives = 317/469 (67%), Gaps = 30/469 (6%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L + DE TVRSLNGCRV D+IL+LVPN++ F TTLRC++FWAKRRGVYSNV+GFLGG+
Sbjct: 185 SILQNTDEQTVRSLNGCRVTDRILRLVPNIQSFRTTLRCMRFWAKRRGVYSNVSGFLGGI 244
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQLYPNA+P+MLVSRFFRV+T WRWPNPVMLCA +E LG VWDPR+N +
Sbjct: 245 NWALLVARICQLYPNALPNMLVSRFFRVFTQWRWPNPVMLCANEEGSLGLQVWDPRRNPK 304
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLR+M ++F+ G+ ICE +E NK+ W LFEPY F
Sbjct: 305 DRYHLMPIITPAYPCMNSSYNVSASTLRIMTEEFRRGHDICEVMEENKSDWDTLFEPYPF 364
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQ+DI A N DD+ WKGWVESRLRQLTL IER TY LQCHPYP ++ D S+
Sbjct: 365 FEAYKNYLQIDITAENDDDIRIWKGWVESRLRQLTLKIERHTYNMLQCHPYPGDFSDKSR 424
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
P HC +FMGLQRK G G+QFDIR +V+EFK S+N+Y K GMEI VSH++R+ I
Sbjct: 425 PFHHC-YFMGLQRKQGGPASGGEQFDIRLTVDEFKHSVNVYTQRKRGMEIYVSHVKRRSI 483
Query: 302 PPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQK 361
P +VFP G + +R +L R S + + ES+D D KR I
Sbjct: 484 PNFVFPGGVRPSRASKLTWDIRRSSELKASDSTQVDSPSEATESLDGDDRRKRIRI---- 539
Query: 362 QDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSV-----ITSVTSEV 416
D A +++R+G + P +E+ E VSN+S + + +
Sbjct: 540 ------DDNANTNLRNGECLAMAHSHP------EEVHEVSQVSNTSSCSIKDVNFIPTSA 587
Query: 417 GSCEDVGNESVAGSSEGNNGS--VEGSNNPVS----SQSDCCDADSQSL 459
+ E++ + V+ + G++GS V S N VS S+C +A+ ++
Sbjct: 588 NNLENLAD--VSSQNNGDHGSLRVSPSTNNVSDAAADTSNCKEAEKLAI 634
>gi|242096166|ref|XP_002438573.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
gi|241916796|gb|EER89940.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
Length = 468
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 213/263 (80%), Positives = 238/263 (90%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDE TVRSLNGCRVADQI++LVPN+E+F TTLRCLK+WAKRRGVYSNVTGFLGGV
Sbjct: 180 SVLYDVDEATVRSLNGCRVADQIIRLVPNIENFRTTLRCLKYWAKRRGVYSNVTGFLGGV 239
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLC+I+E E+GF VWDPRKN R
Sbjct: 240 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEDEVGFPVWDPRKNPR 299
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ HHMPIITPAYPCMNSSYNVSTSTLRVM++QFQ+GN IC+E+E+NKA WSALFEP+ F
Sbjct: 300 DRCHHMPIITPAYPCMNSSYNVSTSTLRVMVEQFQFGNKICQEIEMNKASWSALFEPFQF 359
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQVDI+A + +DL WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+
Sbjct: 360 FEAYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSR 419
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQ 264
CAHCAFFMGL RK G +QEG
Sbjct: 420 QCAHCAFFMGLSRKEGVKIQEGH 442
>gi|42562141|ref|NP_173240.2| poly(A) polymerase 1 [Arabidopsis thaliana]
gi|9665075|gb|AAF97277.1|AC034106_20 Strong similarity to nuclear poly(A) polymerase from Arabidopsis
thaliana gb|AF255297 and contains a
Nucleotidyltransferase PF|01909 domain. ESTs
gb|AV536592, gb|AV553256, gb|AV561630, gb|AV532289 come
from this gene [Arabidopsis thaliana]
gi|29029092|gb|AAO64925.1| At1g17980 [Arabidopsis thaliana]
gi|32527642|gb|AAP86214.1| poly(A) polymerase [Arabidopsis thaliana]
gi|110743114|dbj|BAE99449.1| hypothetical protein [Arabidopsis thaliana]
gi|332191538|gb|AEE29659.1| poly(A) polymerase 1 [Arabidopsis thaliana]
Length = 713
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 208/310 (67%), Positives = 250/310 (80%), Gaps = 2/310 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L + DE TVRSLNGCRV DQIL+LVPN+++F TTLRC++FWAKRRGVYSNV+GFLGG+
Sbjct: 180 SILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGI 239
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQLYPNA+P++LVSRFFRV+ W WPN + LC+ DE LG VWDPR N +
Sbjct: 240 NWALLVARICQLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPK 299
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLR+M +FQ GN ICE +E NKA W LFEP+ F
Sbjct: 300 DRLHIMPIITPAYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAF 359
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQ+DI AAN DDL WKGWVESRLRQLTL IER + L CHP+PH++ DTS+
Sbjct: 360 FEAYKNYLQIDISAANVDDLRKWKGWVESRLRQLTLKIERH-FKMLHCHPHPHDFQDTSR 418
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
P HC++FMGLQRK G EG+QFDIR +VEEFK ++N Y W PGMEI V HI+R+ +
Sbjct: 419 PL-HCSYFMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSL 477
Query: 302 PPYVFPEGYK 311
P +VFP G +
Sbjct: 478 PNFVFPGGVR 487
>gi|42571529|ref|NP_973855.1| poly(A) polymerase 1 [Arabidopsis thaliana]
gi|332191537|gb|AEE29658.1| poly(A) polymerase 1 [Arabidopsis thaliana]
Length = 586
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 208/310 (67%), Positives = 250/310 (80%), Gaps = 2/310 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L + DE TVRSLNGCRV DQIL+LVPN+++F TTLRC++FWAKRRGVYSNV+GFLGG+
Sbjct: 53 SILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGI 112
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQLYPNA+P++LVSRFFRV+ W WPN + LC+ DE LG VWDPR N +
Sbjct: 113 NWALLVARICQLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPK 172
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS STLR+M +FQ GN ICE +E NKA W LFEP+ F
Sbjct: 173 DRLHIMPIITPAYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAF 232
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQ+DI AAN DDL WKGWVESRLRQLTL IER + L CHP+PH++ DTS+
Sbjct: 233 FEAYKNYLQIDISAANVDDLRKWKGWVESRLRQLTLKIERH-FKMLHCHPHPHDFQDTSR 291
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
P HC++FMGLQRK G EG+QFDIR +VEEFK ++N Y W PGMEI V HI+R+ +
Sbjct: 292 PL-HCSYFMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSL 350
Query: 302 PPYVFPEGYK 311
P +VFP G +
Sbjct: 351 PNFVFPGGVR 360
>gi|357521515|ref|XP_003631046.1| Poly(A) polymerase [Medicago truncatula]
gi|355525068|gb|AET05522.1| Poly(A) polymerase [Medicago truncatula]
Length = 822
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/389 (58%), Positives = 267/389 (68%), Gaps = 44/389 (11%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPN-----------------------------VE 32
++L DE TVRSLNGCRV DQIL LVPN V+
Sbjct: 186 AILQYTDEQTVRSLNGCRVTDQILHLVPNIQVDKYRTFTFSFDMTSGFHVIDYISISQVQ 245
Query: 33 HFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTM 92
+F TTLRC+K WAK RGVYSNV GFLGG+NWALLV R+CQLYPNA+P+MLVSRFFRVYT
Sbjct: 246 NFRTTLRCVKLWAKCRGVYSNVAGFLGGINWALLVGRICQLYPNALPNMLVSRFFRVYTQ 305
Query: 93 WRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMM 152
WRWPNPVMLC I E LG VWDPR+N +DK H MPIITPAYPCMNSSYNVS STLRVM
Sbjct: 306 WRWPNPVMLCTIKEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSLSTLRVMT 365
Query: 153 DQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRL 212
++FQ G+ ICE +E NKA W LFEPY FFESY+NYL++DI A N DDL WKGWV+SRL
Sbjct: 366 EEFQRGDEICEAMEANKADWDTLFEPYPFFESYKNYLRIDISAENVDDLRNWKGWVKSRL 425
Query: 213 RQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSV 272
RQLTL IER+TYG LQCHP+P ++ D S+P HC++FMGLQRK G EG QFD+R +V
Sbjct: 426 RQLTLKIERNTYGMLQCHPHPGDFSDKSRPL-HCSYFMGLQRKQGVPANEGGQFDMRLTV 484
Query: 273 EEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY------------KRTRHPRLA- 319
EEFK S+N Y WKPGM I +SH++R+ IP +VFP G KR R++
Sbjct: 485 EEFKHSVNAYTQWKPGMNISISHVKRRNIPAFVFPGGVRPKCPSKVTWVSKRRSELRVSG 544
Query: 320 -SQQRSSENGNEYQTGSGLKRKKDPESVD 347
Q S+ G E + KRK+ +S D
Sbjct: 545 HGQAEKSQVGKELGANNDRKRKQAEDSGD 573
>gi|297737752|emb|CBI26953.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/341 (63%), Positives = 261/341 (76%), Gaps = 4/341 (1%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +VDE TVRSLNGCRV DQIL+LVPN+++F TTLRC++FWAKRRGVYSNV+GFLGG+
Sbjct: 184 TILQNVDEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGI 243
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQLYPNAVPS LVSRFFRVYT WRWPNPVMLC I+E LG VWDPR+N +
Sbjct: 244 NWALLVARICQLYPNAVPSTLVSRFFRVYTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIK 303
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP MNSSYNVS STLR+M ++ Q GN I +E+E W LFEP+LF
Sbjct: 304 DRNHLMPIITPAYPSMNSSYNVSWSTLRIMEEELQRGNEIVKEMETENTGWITLFEPFLF 363
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQ+DI A N DL WKGWVESRLR LT IERDT G LQCHP+P E+ DTS+
Sbjct: 364 FEAYKNYLQIDITAENDVDLRNWKGWVESRLRLLTRKIERDTGGMLQCHPHPAEFSDTSR 423
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
+C +FMGL+RK G QEG+QFDIR +V++FK ++ MY WK GM I V HIRRK I
Sbjct: 424 SFHYC-YFMGLRRKEGSAAQEGEQFDIRLTVDDFKNTVWMYSSWKRGMWIHVCHIRRKNI 482
Query: 302 PPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKD 342
P +VFP G + + ++A +Q + + KRK+D
Sbjct: 483 PNFVFPGGVRPPQPMKVAGEQGQVSKPMGFNSQ---KRKRD 520
>gi|359472651|ref|XP_002280091.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 587
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 215/341 (63%), Positives = 261/341 (76%), Gaps = 4/341 (1%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +VDE TVRSLNGCRV DQIL+LVPN+++F TTLRC++FWAKRRGVYSNV+GFLGG+
Sbjct: 184 TILQNVDEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGI 243
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQLYPNAVPS LVSRFFRVYT WRWPNPVMLC I+E LG VWDPR+N +
Sbjct: 244 NWALLVARICQLYPNAVPSTLVSRFFRVYTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIK 303
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP MNSSYNVS STLR+M ++ Q GN I +E+E W LFEP+LF
Sbjct: 304 DRNHLMPIITPAYPSMNSSYNVSWSTLRIMEEELQRGNEIVKEMETENTGWITLFEPFLF 363
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE+Y+NYLQ+DI A N DL WKGWVESRLR LT IERDT G LQCHP+P E+ DTS+
Sbjct: 364 FEAYKNYLQIDITAENDVDLRNWKGWVESRLRLLTRKIERDTGGMLQCHPHPAEFSDTSR 423
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
+C +FMGL+RK G QEG+QFDIR +V++FK ++ MY WK GM I V HIRRK I
Sbjct: 424 SFHYC-YFMGLRRKEGSAAQEGEQFDIRLTVDDFKNTVWMYSSWKRGMWIHVCHIRRKNI 482
Query: 302 PPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKD 342
P +VFP G + + ++A +Q + + KRK+D
Sbjct: 483 PNFVFPGGVRPPQPMKVAGEQGQVSKPMGFNSQ---KRKRD 520
>gi|167998971|ref|XP_001752191.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696586|gb|EDQ82924.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 553
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 206/316 (65%), Positives = 249/316 (78%), Gaps = 1/316 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +VDE +VRSLNGCRV D+IL+LVPN+EHF TTLR +K WAKRRGVYSNV GFLGGV
Sbjct: 176 TILQNVDEQSVRSLNGCRVTDRILRLVPNMEHFRTTLRYVKLWAKRRGVYSNVIGFLGGV 235
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQLYPNAVPS+L+SRFFRVY WRWPNPVMLCAI+E LG VWDPR+N R
Sbjct: 236 NWALLVARICQLYPNAVPSVLLSRFFRVYKQWRWPNPVMLCAIEEGPLGLPVWDPRRNPR 295
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MPIITP YPC NSS+NVS STLRVM ++F+ G++IC+ ++ A WS LFEPY F
Sbjct: 296 DRSHLMPIITPTYPCQNSSFNVSNSTLRVMTEEFKRGDSICDSLDSKVADWSKLFEPYPF 355
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FESY+NYLQ+DI A + +DL WKGWVESRLRQL L +E+DT+G LQCHP+P + DTSK
Sbjct: 356 FESYKNYLQIDISAGDEEDLRIWKGWVESRLRQLILKVEKDTFGALQCHPHPSAFHDTSK 415
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
C+FF+ LQRK G FD+ ++ EFK S+N Y+ WKP M+I VSH+R KQI
Sbjct: 416 RVQVCSFFVALQRKQG-APPSSTPFDMCHTIAEFKHSVNQYLLWKPTMKIHVSHVRPKQI 474
Query: 302 PPYVFPEGYKRTRHPR 317
P YVFP G + R PR
Sbjct: 475 PTYVFPNGIRPVRPPR 490
>gi|168067163|ref|XP_001785494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662901|gb|EDQ49701.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 494
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 205/316 (64%), Positives = 249/316 (78%), Gaps = 1/316 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L +VDE +VRSLNGCRV D+IL+LVPN+EHF TTLR +K WAKRRGVYSNV GFLGGV
Sbjct: 180 SILQNVDEQSVRSLNGCRVTDRILRLVPNIEHFRTTLRYVKLWAKRRGVYSNVIGFLGGV 239
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQLYPNAVPS+L+SRFFRVY WRWPNPVMLCAI+E LG +WDPRKN R
Sbjct: 240 NWALLVARICQLYPNAVPSVLLSRFFRVYKQWRWPNPVMLCAIEEGSLGLPIWDPRKNPR 299
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MPIITP YPC NSS+NVS STLRVM ++F+ G+ +C+ ++ A WS LFEPY F
Sbjct: 300 DRSHLMPIITPTYPCQNSSFNVSNSTLRVMTEEFKRGDGVCDSLDSKVADWSKLFEPYPF 359
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FESY+NYLQ++I A + +DL WKGWVESRLRQL L +E+DT+G LQCHP+P+ + DTSK
Sbjct: 360 FESYKNYLQIEITAGDEEDLRIWKGWVESRLRQLILKVEKDTFGMLQCHPHPNAFHDTSK 419
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
C+FF+ LQRK G FD+ ++ EFK S+N Y+ WKP M+I VSH+R KQI
Sbjct: 420 KVQVCSFFVALQRKQG-AQHSSTPFDMCHTIAEFKHSVNQYLLWKPTMKIGVSHVRPKQI 478
Query: 302 PPYVFPEGYKRTRHPR 317
P YVFP G + R PR
Sbjct: 479 PTYVFPNGIRPVRPPR 494
>gi|242038623|ref|XP_002466706.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
gi|241920560|gb|EER93704.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
Length = 750
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 201/320 (62%), Positives = 243/320 (75%), Gaps = 1/320 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+LN+VDE TVRSLNGCRV DQIL+LVPN+ F TTLR +++W KRRGVYSNV GFLGG+
Sbjct: 180 SILNNVDEQTVRSLNGCRVTDQILRLVPNILSFRTTLRFIRYWGKRRGVYSNVMGFLGGI 239
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWA+LV R+CQLYPNA PSML+SRFFRVY+ W+WPNPVMLC I+E LG VWDPR+N R
Sbjct: 240 NWAILVGRICQLYPNASPSMLISRFFRVYSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYR 299
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS ST VM +F IC+ ++ KA W ALFEPY F
Sbjct: 300 DRGHQMPIITPAYPCMNSSYNVSVSTRYVMTQEFTRAFEICQAIDEGKADWDALFEPYPF 359
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FESY+NYL+V+I A N D+L +WKGWVESRLR L L IER ++ + HPYP ++ D S+
Sbjct: 360 FESYKNYLEVNITARNEDELRSWKGWVESRLRTLVLKIERYSHEMILAHPYPKDFSDKSR 419
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
P HC +FMGL RK QE +QFDIRG V EFK +I Y WK GM+I VSH++RK+I
Sbjct: 420 PL-HCFYFMGLWRKQTTQTQEAEQFDIRGIVNEFKNTICAYQQWKEGMDIEVSHVKRKEI 478
Query: 302 PPYVFPEGYKRTRHPRLASQ 321
P +VFP G + +R R A +
Sbjct: 479 PLFVFPGGVRPSRSSRTAHK 498
>gi|297605720|ref|NP_001057507.2| Os06g0319600 [Oryza sativa Japonica Group]
gi|255676996|dbj|BAF19421.2| Os06g0319600, partial [Oryza sativa Japonica Group]
Length = 769
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 200/321 (62%), Positives = 245/321 (76%), Gaps = 1/321 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L++VDE TVRSLNGCRV D+IL+LVPN+ F TTLR ++FWAKRRGVYSNV GFLGG+
Sbjct: 201 SILHNVDEQTVRSLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGI 260
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQLYPNA PSML+SRFF+VY+ W+WPNPVMLC I+E LG VWDPR+N R
Sbjct: 261 NWALLVARICQLYPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFR 320
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ HHMPIITPAYP MNSSYNVS ST VM+ +F + IC+ ++ KA W ALFEPY F
Sbjct: 321 DRGHHMPIITPAYPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPF 380
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FESYRNYL+++I A N DDL WKGWVESRLR L L IER T L HP P +++D+S+
Sbjct: 381 FESYRNYLKIEITARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSR 440
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
P HC +FMGL +K QE +Q+DIR V EFK +I+ Y W+ GMEI VSH++RK I
Sbjct: 441 PL-HCFYFMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDI 499
Query: 302 PPYVFPEGYKRTRHPRLASQQ 322
P +VFP G + +R R ++
Sbjct: 500 PSFVFPGGIRPSRPSRTVGKE 520
>gi|218198073|gb|EEC80500.1| hypothetical protein OsI_22746 [Oryza sativa Indica Group]
Length = 748
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 200/321 (62%), Positives = 245/321 (76%), Gaps = 1/321 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L++VDE TVRSLNGCRV D+IL+LVPN+ F TTLR ++FWAKRRGVYSNV GFLGG+
Sbjct: 180 SILHNVDEQTVRSLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGI 239
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQLYPNA PSML+SRFF+VY+ W+WPNPVMLC I+E LG VWDPR+N R
Sbjct: 240 NWALLVARICQLYPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFR 299
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ HHMPIITPAYP MNSSYNVS ST VM+ +F + IC+ ++ KA W ALFEPY F
Sbjct: 300 DRGHHMPIITPAYPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPF 359
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FESYRNYL+++I A N DDL WKGWVESRLR L L IER T L HP P +++D+S+
Sbjct: 360 FESYRNYLKIEITARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSR 419
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
P HC +FMGL +K QE +Q+DIR V EFK +I+ Y W+ GMEI VSH++RK I
Sbjct: 420 PL-HCFYFMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDI 478
Query: 302 PPYVFPEGYKRTRHPRLASQQ 322
P +VFP G + +R R ++
Sbjct: 479 PSFVFPGGIRPSRPSRTVGKE 499
>gi|222635475|gb|EEE65607.1| hypothetical protein OsJ_21148 [Oryza sativa Japonica Group]
Length = 748
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 200/321 (62%), Positives = 245/321 (76%), Gaps = 1/321 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L++VDE TVRSLNGCRV D+IL+LVPN+ F TTLR ++FWAKRRGVYSNV GFLGG+
Sbjct: 180 SILHNVDEQTVRSLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGI 239
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQLYPNA PSML+SRFF+VY+ W+WPNPVMLC I+E LG VWDPR+N R
Sbjct: 240 NWALLVARICQLYPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFR 299
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ HHMPIITPAYP MNSSYNVS ST VM+ +F + IC+ ++ KA W ALFEPY F
Sbjct: 300 DRGHHMPIITPAYPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPF 359
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FESYRNYL+++I A N DDL WKGWVESRLR L L IER T L HP P +++D+S+
Sbjct: 360 FESYRNYLKIEITARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSR 419
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
P HC +FMGL +K QE +Q+DIR V EFK +I+ Y W+ GMEI VSH++RK I
Sbjct: 420 PL-HCFYFMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDI 478
Query: 302 PPYVFPEGYKRTRHPRLASQQ 322
P +VFP G + +R R ++
Sbjct: 479 PSFVFPGGIRPSRPSRTVGKE 499
>gi|58220769|gb|AAW68016.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 748
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/321 (61%), Positives = 244/321 (76%), Gaps = 1/321 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L++VDE TVRSLNGCRV D+IL+LVPN+ F TTLR L+FWAKRRGVYSNV GFLGG+
Sbjct: 180 SILHNVDEQTVRSLNGCRVTDKILRLVPNILTFRTTLRSLRFWAKRRGVYSNVIGFLGGI 239
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVAR+CQLYPNA PSML+SRFF+VY+ W+WPNPVMLC I+E LG VWDPR+N R
Sbjct: 240 NWALLVARICQLYPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFR 299
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ HHMPIITPAYP MNSSYNVS ST VM+ +F + IC+ ++ +A W ALFEPY F
Sbjct: 300 DRGHHMPIITPAYPSMNSSYNVSISTRHVMVQEFTRASDICQAIDEREADWDALFEPYPF 359
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FESYRNYL+++I A N DDL WKGWVESRLR L L IER T L HP P +++D+S+
Sbjct: 360 FESYRNYLKIEITARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSR 419
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
P HC +FMGL +K QE +Q+DIR V EFK +I+ Y W+ GMEI VSH++RK I
Sbjct: 420 PL-HCFYFMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDI 478
Query: 302 PPYVFPEGYKRTRHPRLASQQ 322
P +VFP + +R R ++
Sbjct: 479 PSFVFPGRIRPSRPSRTVGKE 499
>gi|238013826|gb|ACR37948.1| unknown [Zea mays]
Length = 428
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/430 (53%), Positives = 272/430 (63%), Gaps = 31/430 (7%)
Query: 81 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 140
MLVSRFFRV+T W+WPNPVMLC+I+E ELGF VWDPRKN RD+ HHMPIITPAYPCMNSS
Sbjct: 1 MLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 60
Query: 141 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 200
YNVSTSTLRVM++QFQ+GN IC+E+E+NK W ALFEP+ FFE+Y+NYLQVDI+A + +D
Sbjct: 61 YNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYLQVDIIAEDDED 120
Query: 201 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 260
L WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+ CAHCAFFMGL RK G +
Sbjct: 121 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGVKI 180
Query: 261 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKR---TRHPR 317
QEGQQFDIRG+V+EF+ INMYMFWKPGME+ VSH+RRKQ+P YVFPEGYKR +RH
Sbjct: 181 QEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSRHVN 240
Query: 318 LASQQRSSENGNEYQT-GSGLKRKKDPESVDQDGPEKRQSISP-----QKQDSLSPDHL- 370
S + +E+G ++ S LKRK D D KR S SP Q + D
Sbjct: 241 HQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSPVHPKNSPQSGSTGDETR 300
Query: 371 -------APSSVRSGTGSNVEPV--IPDKRVLNQEIAEGGDVSNSSVITS---------- 411
APS G+ ++ + PD + G V + I+
Sbjct: 301 CNNQIKRAPSDASGGSPASPQASERSPDTILSAPRCTTTGAVCSGDAISKHSSVPLVENC 360
Query: 412 VTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAF 471
T V C + + SE GSNN D L EN GNG
Sbjct: 361 TTPTVAVCTTLKRVAEKVVSELVGSERLGSNNSAELLESMEKED--VLAENVRFGGNGVA 418
Query: 472 QDRVHEELEL 481
Q + EELE+
Sbjct: 419 QGGLPEELEV 428
>gi|414872023|tpg|DAA50580.1| TPA: hypothetical protein ZEAMMB73_982818 [Zea mays]
Length = 745
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/399 (54%), Positives = 268/399 (67%), Gaps = 17/399 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L++VDE TVRSLNGCRV DQIL+LVPN+ F TTLR ++ W KRRGVYSNV GFLGG+
Sbjct: 180 SILHNVDEQTVRSLNGCRVTDQILRLVPNILSFRTTLRFIRCWGKRRGVYSNVMGFLGGI 239
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWA+LV R+CQLYPNA PSML+SRFFRVY+ W+WPNPVMLC I+E LG VWDPR+N R
Sbjct: 240 NWAILVGRICQLYPNASPSMLISRFFRVYSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYR 299
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS ST VM+ +F IC+ ++ KA W ALFEPY F
Sbjct: 300 DRGHQMPIITPAYPCMNSSYNVSVSTRYVMVQEFTQAFEICQAIDEGKADWDALFEPYPF 359
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FESY+NYL+V+I A N DDL WKGWVESRLR L L IER ++ + HPYP ++ D S+
Sbjct: 360 FESYKNYLEVNITARNEDDLRNWKGWVESRLRTLVLKIERYSHEMILAHPYPKDFSDKSR 419
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
P H +FMGL RK QE +QFDIRG V EFK +I Y K GM+I VSH++RK+I
Sbjct: 420 PL-HIFYFMGLWRKQTTQAQETEQFDIRGIVNEFKNTICAYQHRKEGMDIEVSHVKRKEI 478
Query: 302 PPYVFPEGYKRTRHPRLASQQR----SSENGNEYQTGS--GLKRKKDPESVDQDGPEKRQ 355
P +VFP G + +R R + + + + Q G+ G+ D + V G +Q
Sbjct: 479 PLFVFPGGVRPSRTSRTTHKNSRAIPTRDVSADDQVGNLLGVASCSDAQHVPCKGSYMKQ 538
Query: 356 SISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLN 394
PD A G+ S + P +P+K VLN
Sbjct: 539 P---------EPD-FAGGFQLPGSISLLPPSLPNKVVLN 567
>gi|326517509|dbj|BAK03673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/376 (55%), Positives = 260/376 (69%), Gaps = 8/376 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L++VDE VRSLNGCRV DQIL+LVPN+ F TTLR +++W KRRGVYSNV GFLGG+
Sbjct: 178 SILHNVDEQAVRSLNGCRVTDQILRLVPNIPSFRTTLRFMRYWGKRRGVYSNVMGFLGGI 237
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWA+LVAR+CQLYPNA PSML+SRFFRVY+ W+WPNPV LC I+E LG VWDPR+N R
Sbjct: 238 NWAILVARICQLYPNASPSMLISRFFRVYSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFR 297
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVSTST VM+ +F G IC+ ++ N+A W LFEPY F
Sbjct: 298 DRGHQMPIITPAYPCMNSSYNVSTSTRYVMIQEFTRGYEICQAIDENRATWDDLFEPYPF 357
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE Y+NYL+V I A + DDL WKGWVESRLR L L ER T+ L HP+P ++ D S+
Sbjct: 358 FELYKNYLEVGITARSEDDLRNWKGWVESRLRTLVLKFERYTHEMLLAHPHPRDFSDGSR 417
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
P H +FMGL RK QE +QFDIRG V EFK ++ Y + GM+I VSH++RK I
Sbjct: 418 PL-HSFYFMGLWRKQTAQPQEAEQFDIRGIVNEFKSAVLAYAHRREGMDIEVSHVKRKDI 476
Query: 302 PPYVFPEGYKRTRHPRLASQQRSSENGN----EYQTGS--GLKRKKDPES-VDQDGPEKR 354
P +VFP G + R R A++ + + N + Q G+ G + DP+S +D G +
Sbjct: 477 PLFVFPGGVRPPRSSRTAARSSRTVSRNVVTADGQVGNPLGAESWSDPQSALDHSGGYQS 536
Query: 355 QSISPQKQDSLSPDHL 370
+ P +P L
Sbjct: 537 TLLVPSVSSKETPSIL 552
>gi|357138719|ref|XP_003570937.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 760
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/329 (60%), Positives = 239/329 (72%), Gaps = 1/329 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L++VDE VRSLNGCRV DQIL+LVPN+ F TTLR +++W KRRGVYSNV GFLGG+
Sbjct: 199 SILHNVDEQAVRSLNGCRVTDQILRLVPNIPSFRTTLRFMRYWGKRRGVYSNVMGFLGGI 258
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWA+LVAR+CQLYPNA PSML+SRFFRVY+ W+WPNPV LC I+E LG VWDPR+N R
Sbjct: 259 NWAILVARICQLYPNASPSMLISRFFRVYSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFR 318
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYPCMNSSYNVS ST VM+ +F G IC+ ++ N+A W LFEPY F
Sbjct: 319 DRGHQMPIITPAYPCMNSSYNVSVSTRYVMVQEFTRGYEICQAIDENRATWDDLFEPYPF 378
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
FE YRNYL+V I A N DDL WKGWVESRLR L L ER T+ L HP+P ++ D S+
Sbjct: 379 FELYRNYLEVVISARNEDDLRNWKGWVESRLRTLVLKFERYTHEMLLAHPHPRDFSDGSR 438
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
P H +FMGL RK QE +QFDIRG V EFK S+ Y GM+I VSH++RK I
Sbjct: 439 PL-HSFYFMGLWRKQTVQPQEAEQFDIRGIVNEFKSSVCAYAHRGEGMDIEVSHVKRKDI 497
Query: 302 PPYVFPEGYKRTRHPRLASQQRSSENGNE 330
P +VFP G + R R A + + + N+
Sbjct: 498 PLFVFPGGVRPPRSSRTAGRNGHAVSRND 526
>gi|356511273|ref|XP_003524351.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Glycine
max]
Length = 702
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/350 (55%), Positives = 243/350 (69%), Gaps = 13/350 (3%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSN--VTGFLGG 60
+L + DE TV SLNGCRV D++L +++FCTTLRC+KFWAK GVY VT +LGG
Sbjct: 185 ILQNADEETVCSLNGCRVTDKVL-----LQNFCTTLRCMKFWAKHCGVYXKNFVTSYLGG 239
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNR 120
+NWALLVAR C L+PNA+P+MLVSRFFRVYT W WPNPVMLCAI+E +G +WDPR+
Sbjct: 240 INWALLVARTCXLFPNALPNMLVSRFFRVYTQWCWPNPVMLCAIEEGSVGLQIWDPRRYP 299
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
D+ H MPIITPAY CMNSSYNVS+ TL +M ++FQ GN ICE + W+ + +
Sbjct: 300 NDRFHLMPIITPAYACMNSSYNVSSITLCIMTEEFQRGNEICEYFAQDDLTWAFKLK-FP 358
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
SY+NYLQ+DI NADDL WKGWVES LRQL L IER YG LQCHP+P + D S
Sbjct: 359 CSNSYKNYLQIDISGENADDLRKWKGWVESHLRQLRLQIERHIYGMLQCHPHPGDSSDKS 418
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 300
+P HC+ FM LQRK G V +G QFDIR +VEEFK S+N+Y W PGM++ V H++ +
Sbjct: 419 RP-FHCSNFMALQRKQGVPVNDGGQFDIRLTVEEFKHSVNIYTLWIPGMDVHVPHVKHRN 477
Query: 301 IPPYVFPEGYKRTRHP-RLASQQRSSENGNEYQTGSG--LKRKKDPESVD 347
IP +VFP G R HP ++ + + S+ G G+ KRK+ +SVD
Sbjct: 478 IPTFVFP-GSVRPSHPSKVTWEIKKSQEGKMAVLGANDDRKRKQAEDSVD 526
>gi|242074144|ref|XP_002447008.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
gi|241938191|gb|EES11336.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
Length = 548
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 172/316 (54%), Positives = 222/316 (70%), Gaps = 12/316 (3%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
+VL +D T RS+NG RVAD+IL+LVP+ F T LRC+K WAK RGVYSNV+GFLGGV
Sbjct: 181 AVLRGLDHVTARSMNGVRVADEILRLVPDAAAFRTALRCVKLWAKARGVYSNVSGFLGGV 240
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAID-EAELGFSVWDPRKNR 120
WA+LVARVCQLYPNA PSMLVSRFF+V + W+WP PVMLC I+ + ELG VWD R+N
Sbjct: 241 AWAILVARVCQLYPNAAPSMLVSRFFKVLSQWKWPTPVMLCDIEHDDELGLPVWDGRRNP 300
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-WSALFEPY 179
RD+TH MP+ITPAYPCMN +YNVS +T R++ +Q Q G+ C+E+ + W ALF+P+
Sbjct: 301 RDRTHLMPVITPAYPCMNCTYNVSQATQRIIKEQIQAGHVACQEIAAGGDRGWGALFQPF 360
Query: 180 LFFESYRNYLQVD-IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 238
FF ++++YLQVD VA ++L WKGWVESRLRQL +ERDT+G+L CH P Y D
Sbjct: 361 PFFRTHKSYLQVDATVAGGEEELREWKGWVESRLRQLVAKVERDTFGELLCHQNPRAY-D 419
Query: 239 TSKPCAHCA--FFMGLQR------KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 290
CA FF+GL + +P + QFD+R + +EF + Y FW+PG+E
Sbjct: 420 AEPHGLRCASSFFVGLSKPQQQRQQPSPPQGQQPQFDLRATADEFLQDVYTYRFWRPGLE 479
Query: 291 ICVSHIRRKQIPPYVF 306
+ V H+RRK +PPYV
Sbjct: 480 LAVKHVRRKDLPPYVM 495
>gi|218195447|gb|EEC77874.1| hypothetical protein OsI_17161 [Oryza sativa Indica Group]
Length = 556
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 175/320 (54%), Positives = 220/320 (68%), Gaps = 15/320 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +D T RSLNG RVAD+IL+LVP+ F TTLRC+K WAK RGVYSNV GFLGGV
Sbjct: 178 SVLRGLDLATARSLNGVRVADEILRLVPDAAAFRTTLRCVKHWAKARGVYSNVAGFLGGV 237
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI--DEAELGFS--VWDPR 117
WA+LVARVC LYPNA PSML+ RFFRV+ W+WP+PVML AI D+ ELG S VWDPR
Sbjct: 238 GWAILVARVCLLYPNASPSMLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPR 297
Query: 118 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV---ELNKAQWSA 174
+N RDK H MPI+TPAYPCMNS YNVS +TLRV+ +Q G+ +C+E+ W
Sbjct: 298 RNPRDKIHLMPIVTPAYPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDK 357
Query: 175 LFEPYLFFESYRNYLQVDIVAANA--DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
LF+P+ FF +Y++YLQVD+ DDL WKGWVESRLR L+ +E DT G L CH +
Sbjct: 358 LFQPFNFFGAYKSYLQVDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLH 417
Query: 233 PHEYV-----DTSKPCAHCAFFMGLQRKPGEVVQEGQQ-FDIRGSVEEFKLSINMYMFWK 286
P Y + + +FF+GL + P + Q+ Q FD+R + E FK + MY +W+
Sbjct: 418 PQPYAAEPHNEPRRRRRTSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWR 477
Query: 287 PGMEICVSHIRRKQIPPYVF 306
PGME+ V+H+RRK +P YV
Sbjct: 478 PGMEVAVAHVRRKDLPSYVL 497
>gi|357168295|ref|XP_003581579.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 552
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 178/333 (53%), Positives = 227/333 (68%), Gaps = 19/333 (5%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +D TVRS+NG RVAD+IL+LVP+ F TTLRC+K WAK RGVYSNV GF GGV
Sbjct: 178 SVLRGMDLATVRSVNGVRVADEILRLVPDAGAFRTTLRCVKLWAKARGVYSNVMGFPGGV 237
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI--DEAELGFSVWDPRKN 119
WA+LVA VCQLYPNA PS+LVSRFF+V W+WPNPV L I D+ +L VWDPR+N
Sbjct: 238 AWAILVAFVCQLYPNAAPSVLVSRFFKVLAPWKWPNPVKLRDIEHDDDDLRLLVWDPRRN 297
Query: 120 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 179
RD+TH MP++TPAYPCMNS YNVS +TLR + Q Q GN +C+++ + A W ALFEP+
Sbjct: 298 PRDRTHLMPVVTPAYPCMNSCYNVSHATLRTITQQLQIGNAVCQKIVASGAGWGALFEPF 357
Query: 180 LFFESYRNYLQVDIVAANA---DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
FF+ Y++YL+VD+ A DL WKGWVESRLRQL + +E T G L CHP P Y
Sbjct: 358 HFFKEYKSYLRVDVKVAGGGGEGDLREWKGWVESRLRQLVMRVETATAGMLLCHPNPQAY 417
Query: 237 VDTSKPC---AHCAFFMGLQRKPGEVVQEGQQ-----FDIRGSVEEFKLSINMYMFWKPG 288
+KP +FF+GL + + ++ QQ FD+R + EEFK + MY+ W+PG
Sbjct: 418 --AAKPTDLQRTTSFFVGLSKPQPQPQEKEQQQPQVPFDLRETAEEFKRKVYMYVSWRPG 475
Query: 289 MEICVSHIRRKQIPPYV----FPEGYKRTRHPR 317
ME+ VSH RRK +P YV P G+ + + P+
Sbjct: 476 MEVEVSHNRRKDLPSYVLEQILPAGHLKRKRPQ 508
>gi|414585702|tpg|DAA36273.1| TPA: hypothetical protein ZEAMMB73_834827 [Zea mays]
Length = 552
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 173/324 (53%), Positives = 225/324 (69%), Gaps = 13/324 (4%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
VL +D T RS+NG RVAD+I++LVP+ F TTLRC+K WAK RGVYSNV+GFLGGV
Sbjct: 177 VLRGLDHVTARSMNGVRVADEIVRLVPDAAAFRTTLRCVKLWAKSRGVYSNVSGFLGGVA 236
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAID-EAELGFSVWDPRKNRR 121
WA+LVARVCQLYPNAVPSMLVSRFF+V++ WRWP PVMLC I+ + ELG VWD R+N
Sbjct: 237 WAILVARVCQLYPNAVPSMLVSRFFKVFSHWRWPIPVMLCDIEHDDELGLPVWDVRRNLP 296
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-WSALFEPYL 180
D++H MP+ITPAYPCMN +YNVS +T RV+ +Q Q G+ C+++ + W ALF+P
Sbjct: 297 DRSHLMPVITPAYPCMNCTYNVSRATHRVIKEQIQAGDVACQKIAAGGGRDWGALFQPSP 356
Query: 181 FFESYRNYLQVD-IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 239
FF ++++YLQVD VA A++L WKGWVESRLRQL +ERDT+G+L CH P Y
Sbjct: 357 FFSTHKSYLQVDAAVAGGAEELREWKGWVESRLRQLVAKVERDTFGELLCHQNPRAY--D 414
Query: 240 SKPCA---HCAFFMGL-----QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEI 291
++P +FF+GL Q KP FD+R +V EF+ + Y FW+PG+E+
Sbjct: 415 AEPHGLRRASSFFVGLSKPQQQHKPHPPEGYPPFFDLRATVLEFQQDVYSYKFWRPGLEL 474
Query: 292 CVSHIRRKQIPPYVFPEGYKRTRH 315
V H+RR ++P YV + R H
Sbjct: 475 VVKHVRRNKLPAYVMQKIGGRNIH 498
>gi|57834146|emb|CAE04327.2| OSJNBb0016D16.18 [Oryza sativa Japonica Group]
Length = 556
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 174/320 (54%), Positives = 219/320 (68%), Gaps = 15/320 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +D T RSLNG RVAD+IL+LVP+ F TTLRC+K WAK RGVYSNV GFLGGV
Sbjct: 178 SVLRGLDLATARSLNGVRVADEILRLVPDATAFRTTLRCVKHWAKARGVYSNVAGFLGGV 237
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI--DEAELGFS--VWDPR 117
WA+LVA VC LYPNA PSML+ RFFRV+ W+WP+PVML AI D+ ELG S VWDPR
Sbjct: 238 GWAILVACVCLLYPNASPSMLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPR 297
Query: 118 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV---ELNKAQWSA 174
+N RDK H MPI+TPAYPCMNS YNVS +TLRV+ +Q G+ +C+E+ W
Sbjct: 298 RNPRDKIHLMPIVTPAYPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDK 357
Query: 175 LFEPYLFFESYRNYLQVDIVAANA--DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
LF+P+ FF +Y++YLQVD+ DDL WKGWVESRLR L+ +E DT G L CH +
Sbjct: 358 LFQPFNFFGAYKSYLQVDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLH 417
Query: 233 PHEYV-----DTSKPCAHCAFFMGLQRKPGEVVQEGQQ-FDIRGSVEEFKLSINMYMFWK 286
P Y + + +FF+GL + P + Q+ Q FD+R + E FK + MY +W+
Sbjct: 418 PQPYAAEPHNEPRRRRRTSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWR 477
Query: 287 PGMEICVSHIRRKQIPPYVF 306
PGME+ V+H+RRK +P YV
Sbjct: 478 PGMEVAVAHVRRKDLPSYVL 497
>gi|222629442|gb|EEE61574.1| hypothetical protein OsJ_15948 [Oryza sativa Japonica Group]
Length = 556
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 173/320 (54%), Positives = 219/320 (68%), Gaps = 15/320 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +D T RSLNG RVAD+IL+LVP+ F TTLRC+K WAK RGVYSNV GFLGGV
Sbjct: 178 SVLRGLDLATARSLNGVRVADEILRLVPDAAAFRTTLRCVKHWAKARGVYSNVAGFLGGV 237
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAID--EAELGFS--VWDPR 117
WA+LVA VC LYPNA PSML+ RFFRV+ W+WP+PVML AI+ + ELG S VWDPR
Sbjct: 238 GWAILVACVCLLYPNASPSMLLPRFFRVFARWKWPSPVMLRAIEHNDGELGLSLPVWDPR 297
Query: 118 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV---ELNKAQWSA 174
+N RDK H MPI+TPAYPCMNS YNVS +TLRV+ +Q G+ +C+E+ W
Sbjct: 298 RNPRDKIHLMPIVTPAYPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDK 357
Query: 175 LFEPYLFFESYRNYLQVDIVAANA--DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
LF+P+ FF +Y++YLQVD+ DDL WKGWVESRLR L+ +E DT G L CH +
Sbjct: 358 LFQPFNFFGAYKSYLQVDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLH 417
Query: 233 PHEYV-----DTSKPCAHCAFFMGLQRKPGEVVQEGQQ-FDIRGSVEEFKLSINMYMFWK 286
P Y + + +FF+GL + P + Q+ Q FD+R + E FK + MY +W+
Sbjct: 418 PQPYAAEPHNEPRRRRRTSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWR 477
Query: 287 PGMEICVSHIRRKQIPPYVF 306
PGME+ V+H+RRK +P YV
Sbjct: 478 PGMEVAVAHVRRKDLPSYVL 497
>gi|413926073|gb|AFW66005.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
Length = 375
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 137/162 (84%), Positives = 152/162 (93%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL DVDE TVRSLNGCRVADQIL+LVPNVE+F TTLRCLK+WAKRRGVYSN+TGFLGGV
Sbjct: 189 SVLCDVDEATVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGV 248
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
NWALLVARVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLCAI+ +LGFS+WDPRKN R
Sbjct: 249 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPR 308
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICE 163
D+ H MPIITPAYPCMNSSYNVSTSTLRV+M+QFQ+GN +C+
Sbjct: 309 DRNHLMPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKVCQ 350
>gi|270004464|gb|EFA00912.1| hypothetical protein TcasGA2_TC003818 [Tribolium castaneum]
Length = 565
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 154/370 (41%), Positives = 233/370 (62%), Gaps = 16/370 (4%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D+ VRSLNGCRV D+IL+LVPNV++F LR +K WAKR G+YSN G+LGGV+
Sbjct: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNVDNFRLALRAIKLWAKRHGIYSNALGYLGGVS 257
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQLYPNA P+ LV +FF V++ W+WP PV+L LGF+VWDPR N +D
Sbjct: 258 WAMLVARTCQLYPNAAPATLVHKFFLVFSQWKWPQPVLLKQPSNVNLGFAVWDPRVNIQD 317
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS++NVS ST +++M++F+ G + +++ L+K W LFEP LFF
Sbjct: 318 RYHLMPIITPAYPQQNSTFNVSGSTRQIIMEEFKLGLQLTDDIMLSKQTWDKLFEPPLFF 377
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVDTSK 241
Y++++ + + A + +D L W G VES+ R L +ER+ + L +P +++ +
Sbjct: 378 MKYKHFIVLLVSAESPEDHLEWCGLVESKFRLLIGTLERNQHITLAHINPESFSLLESQR 437
Query: 242 PC-AHCA-FFMGLQRKPGEVVQEGQQFDIRG---SVEEFKLSINMYMFWKPGMEICVSHI 296
HC+ +F+GL+ E + FDI+ +V+ L+I+M K GM++ H+
Sbjct: 438 ESNTHCSMWFIGLEFAKSENLNVNLTFDIQQFTETVQNHALNISML---KEGMKLEARHV 494
Query: 297 RRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQS 356
+RKQ+ Y+ P KR R + + +S NG + + KR DP + D D P K+
Sbjct: 495 KRKQLYQYLSPSLLKRERKTSITVKSQS--NGTDSK-----KRLSDPGNSDSDNPNKKIR 547
Query: 357 ISPQKQDSLS 366
+S + ++S
Sbjct: 548 LSEEMHSTVS 557
>gi|224088990|ref|XP_002308592.1| predicted protein [Populus trichocarpa]
gi|222854568|gb|EEE92115.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 153/257 (59%), Positives = 188/257 (73%), Gaps = 7/257 (2%)
Query: 164 EVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDT 223
++ELNK QWSALFEPYLFFE+Y+NYLQVDIVAA+A DLLAWKGWVESRLRQLTL IERDT
Sbjct: 210 KIELNKEQWSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLTLKIERDT 269
Query: 224 YGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM 283
G LQCHPYP+EY+D SK CAHCAFFMGLQRK G QEGQQFDIRG+V+EF+ INMY+
Sbjct: 270 DGMLQCHPYPNEYIDPSKQCAHCAFFMGLQRKEGVTGQEGQQFDIRGTVDEFRQDINMYL 329
Query: 284 FWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ--RSSENGNEYQTGSG---LK 338
WKPGM+I VSH+RR+Q+P +VFP+GYKR+R R +QQ R+SE+ Q+GS +K
Sbjct: 330 PWKPGMDIYVSHVRRRQLPGFVFPDGYKRSRPSRHVNQQTNRTSEDVARSQSGSAERHVK 389
Query: 339 RKKDPESVDQD--GPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQE 396
RK D E D PEKR S SPQ+ S+SP A S + S+ E VI +
Sbjct: 390 RKNDCEMADLKPVKPEKRASTSPQRLQSVSPSSSAGRSGMTSLASSCEGVILGCSTIGDI 449
Query: 397 IAEGGDVSNSSVITSVT 413
++ DV+++S + S +
Sbjct: 450 VSNCEDVASNSEVRSTS 466
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/32 (87%), Positives = 30/32 (93%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEH 33
SVL +VDE TVRSLNGCRVADQILKLVPNVE+
Sbjct: 136 SVLYEVDEQTVRSLNGCRVADQILKLVPNVEY 167
>gi|66806183|ref|XP_636814.1| poly polymerase [Dictyostelium discoideum AX4]
gi|74852689|sp|Q54J73.1|PAP_DICDI RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|60465216|gb|EAL63311.1| poly polymerase [Dictyostelium discoideum AX4]
Length = 809
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/333 (44%), Positives = 205/333 (61%), Gaps = 16/333 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++DE ++ SLNGCRV DQILKLVPN+ +F LRC+K WA RRG+YSN+ GFLGGV
Sbjct: 222 SFLKNIDEKSILSLNGCRVTDQILKLVPNIPNFRMALRCIKLWAIRRGIYSNILGFLGGV 281
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-LGFSVWDPRKNR 120
+WALL AR+CQLYPN+ PS ++ RFF+VY +W+WP P++LC I E LG VW+P +
Sbjct: 282 SWALLTARICQLYPNSAPSTIIHRFFKVYEIWKWPAPILLCHIQEGGILGPKVWNP---K 338
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
RDK H MPIITPAYP MNS+YNVS STL++M +F G I ++E + W L E
Sbjct: 339 RDKAHLMPIITPAYPSMNSTYNVSKSTLQLMKSEFVRGAEITRKIETGECTWKNLLEKCD 398
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD-- 238
FF Y Y+++D + N +D W+GW+ES+LR L +E K PYP + +
Sbjct: 399 FFTRYSFYIEIDCYSMNEEDSRKWEGWIESKLRFLISNLESTPKMKFAV-PYPKGFTNNL 457
Query: 239 --TSKPCAHC-AFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG---MEIC 292
+ P C +FFMGL + D+ +V EF I ++ +P M+I
Sbjct: 458 HKANNPDQICTSFFMGLSFNFSNTPGADKSVDLTKAVTEFTGIIKDWLRTQPNPDTMDIK 517
Query: 293 VSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
V +I++KQ+P +V EG P +++RSS
Sbjct: 518 VQYIKKKQLPAFVKDEG---PEEPVKTTKKRSS 547
>gi|303282577|ref|XP_003060580.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458051|gb|EEH55349.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 656
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/330 (43%), Positives = 204/330 (61%), Gaps = 15/330 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D+ +V+SLNGCRVADQ+L+LVPN F LR L+ WA+ RGVYSNV GF GGV
Sbjct: 163 SILQNLDDASVKSLNGCRVADQLLRLVPNHASFRIALRALRVWARERGVYSNVQGFFGGV 222
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
N A+LVARVCQLYPNA SMLV FF+++ W+W PVML AI + G VWD R N+
Sbjct: 223 NLAILVARVCQLYPNAAASMLVYSFFQLWDAWQWTTPVMLTAIIDEGHGLRVWDERVNKA 282
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
++ M IITPAYP NS++NV+ STL V+ +F+ G C ++ + + +W +L+EP F
Sbjct: 283 ERFQLMKIITPAYPAQNSTFNVTHSTLHVLKREFKRGRETCAKILMGQTKWESLWEPLPF 342
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F +++YLQV + A DD W+GWV SRLR L +E + G L HPYP D +K
Sbjct: 343 FTMHKHYLQVTMCAITEDDFKKWEGWVHSRLRMLVQAVETCSGGALIAHPYPERKQDPAK 402
Query: 242 PCA-HCAFFMGLQRKPGEVVQEGQQ---FDIRGSVEEFKLSINMYMF-------WKPGME 290
A HC +++GL P ++ +VE+F++ + ++ W+PGME
Sbjct: 403 DSALHCIYYIGLGPAPPPTTGGPAPRGTLNLNPAVEQFQMLVTSWVNRADGTVQWQPGME 462
Query: 291 ICVSHIRRKQIPPYVFP----EGYKRTRHP 316
+ V H++RK +P + P EG + R P
Sbjct: 463 VHVKHMKRKDVPAWAIPDSGKEGKEEARTP 492
>gi|432902553|ref|XP_004077012.1| PREDICTED: poly(A) polymerase gamma-like [Oryzias latipes]
Length = 834
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 149/334 (44%), Positives = 211/334 (63%), Gaps = 7/334 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN E+F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 188 SILKNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGV 247
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNAV + LV +FF V++ W WPNPV+L +++ L VWDPR N
Sbjct: 248 SWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPS 307
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST +M ++F+YG ++ +E+ KA+W LFEP F
Sbjct: 308 DRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKAEWPKLFEPPSF 367
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHP--YPHEYVD 238
F+ Y++Y+ + A+ ++ L W G VES++R L +ER+ Y L +P +P +
Sbjct: 368 FQKYKHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKEN 427
Query: 239 TSKPCAHCAFFMGLQRKP---GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSH 295
S+ C +F+G+ K E V +DI+ + N K GM+I +H
Sbjct: 428 RSENDFVCMWFIGIIFKKVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATH 487
Query: 296 IRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGN 329
+++KQ+ Y+ PE +R + +A R S GN
Sbjct: 488 VKKKQLHQYLPPELVQRKKR-SIAEVNRGSNGGN 520
>gi|145354311|ref|XP_001421431.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145354383|ref|XP_001421465.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581668|gb|ABO99724.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581702|gb|ABO99758.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 598
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 155/376 (41%), Positives = 224/376 (59%), Gaps = 16/376 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SV+ ++D+P V+SLNGCRVADQ+L++VPN + F LR L+ WA+RRGVYSNV GF GGV
Sbjct: 196 SVMMNLDDPGVKSLNGCRVADQLLRVVPNHDAFRVALRTLRLWAQRRGVYSNVVGFFGGV 255
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-DEAELGFSVWDPRKNR 120
N A+LVARVCQLYPNA PSMLV FF++++ W+W PVML I DE G VWD R N+
Sbjct: 256 NLAILVARVCQLYPNAAPSMLVYSFFQLWSAWQWTTPVMLVPIVDEGLPGMRVWDERVNK 315
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
++ M I+TPAYP NS++NVS STL V+ +F+ G + + + LN A+W L+
Sbjct: 316 AERYQLMKILTPAYPAQNSTFNVSVSTLEVLKAEFKRGKEVTKMILLNTAKWEQLWCSLN 375
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
F E Y++YL V I A N DD W+GWV SR++ L IE T G++ HP Y D
Sbjct: 376 FLEKYKHYLMVTISAKNEDDFKKWEGWVGSRIKLLIQGIENATGGQMLAHPGTSRYKDPE 435
Query: 241 K-PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM-------FWKPGMEIC 292
K +H F+GL + +E ++ +VE+F++++ +M W PGM+
Sbjct: 436 KDENSHVTLFLGLFPSSLKKKEEKVSLNLNPAVEQFQMTVTSWMDRATGESNWVPGMQAN 495
Query: 293 VSHIRRKQIPPYVFPE--GYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDG 350
V +++RK +P +V E GY + + ++ +S E + + K P D
Sbjct: 496 VKYLKRKDLPSFVKEEIDGYVKDIYAPEKEKKAASAEDEEKKIS---EEKPLPLGDDTKA 552
Query: 351 PEKRQSISPQKQDSLS 366
KR+ + Q+ DS++
Sbjct: 553 ARKRKEM--QEDDSIT 566
>gi|47221727|emb|CAG10199.1| unnamed protein product [Tetraodon nigroviridis]
Length = 685
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 156/381 (40%), Positives = 224/381 (58%), Gaps = 21/381 (5%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN E+F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 189 SILKNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGV 248
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNAV + LV +FF V++ W WPNPV+L +++ L VWDPR N
Sbjct: 249 SWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPS 308
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST +M ++F+YG ++ +E+ KA+WS LFEP F
Sbjct: 309 DRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKAEWSKLFEPPHF 368
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ Y++Y+ + A+ ++ L W G VES++R L +ER+ Y L H P + + +
Sbjct: 369 FQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPGSKE 427
Query: 242 PCAHCAF----FMGLQRKP---GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
F F+G+ K E V +DI+ + N K GM+I +
Sbjct: 428 NRNENEFVSMWFIGIIFKKVENAESVNIDLTYDIQSFTDTVYRQANNINMLKNGMKIEAT 487
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ-------------TGSGLKRKK 341
H+++KQ+ Y+ PE ++ + +A RSS G+ + T +G
Sbjct: 488 HVKKKQLNLYLPPELVQKKKRQSIADLNRSSNGGSSKRISLDSSHLDSSRDTDTGTPFSS 547
Query: 342 DPESVDQDGPEKRQSISPQKQ 362
P V + + S+SP K+
Sbjct: 548 PPCKVSKPASDTEDSVSPPKK 568
>gi|157109674|ref|XP_001650777.1| poly a polymerase [Aedes aegypti]
gi|108878961|gb|EAT43186.1| AAEL005356-PA [Aedes aegypti]
Length = 780
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/330 (44%), Positives = 207/330 (62%), Gaps = 23/330 (6%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D +VRSLNGCRV D+IL+LVPN+++F LR +K WAK+ G+YSN G+ GGV+
Sbjct: 257 LLKNLDPKSVRSLNGCRVTDEILRLVPNIDNFRLALRAIKLWAKKHGIYSNSLGYFGGVS 316
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQLYPNAV + LV +FF V++ W+WP PV+L D LGF VWDPR N +D
Sbjct: 317 WAMLVARTCQLYPNAVAATLVHKFFLVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQD 376
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS++NVS+ST +VM+++F G I +E+ L+KA W LFE FF
Sbjct: 377 RFHLMPIITPAYPQQNSTFNVSSSTRKVMLNEFNRGMQITDEIMLSKAGWDKLFEAPSFF 436
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP-----HEY- 236
YR+++ + + + NADD L W G VES++R L L +ER+ + L H P HE
Sbjct: 437 FKYRHFIVLLVTSNNADDHLEWCGLVESKIRYLILNLERNQHINL-AHVNPKCFEQHEQN 495
Query: 237 -------VDTSKPCAHCAF-FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM----F 284
D S+ C+ F+GL+ + E D+ S++ F S++ +
Sbjct: 496 QTERQRESDGSRASTLCSLWFIGLEFERS----ENLNVDLTESIQSFTDSVHKHAVHIKL 551
Query: 285 WKPGMEICVSHIRRKQIPPYVFPEGYKRTR 314
K GM+I H+RRKQ+ Y+ P KR R
Sbjct: 552 LKDGMKIEARHVRRKQLSQYLDPNLLKRER 581
>gi|307201288|gb|EFN81136.1| Poly(A) polymerase gamma [Harpegnathos saltator]
Length = 609
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/329 (44%), Positives = 202/329 (61%), Gaps = 3/329 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D+ VRSLNGCRV D+IL+LVPN+E+F LR +K WAKR G+YSNV G+LGGV+
Sbjct: 192 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVS 251
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQLYPNAV + L+ +FF V++ W+WP PV+L D LG+ VWDPR N D
Sbjct: 252 WAMLVARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISD 311
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS++NVS ST +M + F+ G +I EE+ + KA W LFEP FF
Sbjct: 312 RYHLMPIITPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKANWDKLFEPPNFF 371
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS-K 241
Y++Y+ + ++ A+D L W G VES++R L +ER+ + L H P + +
Sbjct: 372 SKYKHYIVLLARSSTAEDQLEWCGLVESKIRHLIGTLERNPHINL-AHVNPEAFPPLDPE 430
Query: 242 PCAHCA-FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 300
P HC+ +F+GL E + +DI+ VE + K GM I H++RK
Sbjct: 431 PDKHCSMWFIGLLFAKSENLNIDLTYDIKSFVETIERQAEQINMLKEGMWIEAKHVKRKD 490
Query: 301 IPPYVFPEGYKRTRHPRLASQQRSSENGN 329
+ YV P K+ R + S GN
Sbjct: 491 LHTYVSPSLLKKERKVSGGVHRNGSIAGN 519
>gi|383862407|ref|XP_003706675.1| PREDICTED: poly(A) polymerase gamma [Megachile rotundata]
Length = 616
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 143/314 (45%), Positives = 198/314 (63%), Gaps = 3/314 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D+ VRSLNGCRV D+IL+LVPN+E+F LR +K WAKR G+YSNV G+LGGV+
Sbjct: 196 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVS 255
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQLYPNAV + L+ +FF V++ W+WP PV+L D LGF VWDPR N D
Sbjct: 256 WAMLVARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISD 315
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS++NVS ST +M + F+ G +I EE+ + KA W LFEP FF
Sbjct: 316 RYHLMPIITPAYPQQNSTFNVSVSTRTIMQEAFETGLSITEEIIMGKATWDKLFEPPNFF 375
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS-K 241
Y++Y+ + + +A+D L W G VES++R L +ER+ + L H P + +
Sbjct: 376 GKYKHYIVLLARSLSAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLEPE 434
Query: 242 PCAHCA-FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 300
P HC+ +F+GL E + +DI+ V+ + K GM I H++RK
Sbjct: 435 PEGHCSMWFIGLLFAKSENLNVDLTYDIKSFVDSIQRQAEQLSVLKEGMWIEAKHVKRKD 494
Query: 301 IPPYVFPEGYKRTR 314
+ YV P +R R
Sbjct: 495 LHTYVSPSLLRRER 508
>gi|328792143|ref|XP_393202.3| PREDICTED: poly(A) polymerase gamma [Apis mellifera]
Length = 619
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 153/364 (42%), Positives = 215/364 (59%), Gaps = 11/364 (3%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D+ VRSLNGCRV D+IL+LVPN+E+F LR +K WAKR G+YSNV G+LGGV+
Sbjct: 197 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVS 256
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQLYPNAV + L+ +FF V++ W+WP PV+L D LGF VWDPR N D
Sbjct: 257 WAMLVARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISD 316
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS++NVS ST +M + F+ G +I EE+ + KA W LFEP FF
Sbjct: 317 RYHLMPIITPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFF 376
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS-K 241
Y++Y+ + + A+D L W G VES++R L +ER+ + L H P + +
Sbjct: 377 GKYKHYIVLLARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLEPE 435
Query: 242 PCAHCA-FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 300
P HC+ +F+GL E + +DI+ V+ K GM I V H++++
Sbjct: 436 PERHCSMWFIGLLFAKSENLNVDLTYDIKSFVDSILRQAEQLSMLKEGMWIEVKHVKKRD 495
Query: 301 IPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQ 360
+ YV P KR R + + GN SG ++P + R+ +S Q
Sbjct: 496 LHTYVSPSLLKRERKVSGTVHKNGNIAGN---GNSGSVSPRNPGNTTN-----RKRLSDQ 547
Query: 361 KQDS 364
QD+
Sbjct: 548 NQDA 551
>gi|380022244|ref|XP_003694961.1| PREDICTED: poly(A) polymerase gamma [Apis florea]
Length = 619
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 153/364 (42%), Positives = 215/364 (59%), Gaps = 11/364 (3%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D+ VRSLNGCRV D+IL+LVPN+E+F LR +K WAKR G+YSNV G+LGGV+
Sbjct: 197 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVS 256
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQLYPNAV + L+ +FF V++ W+WP PV+L D LGF VWDPR N D
Sbjct: 257 WAMLVARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISD 316
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS++NVS ST +M + F+ G +I EE+ + KA W LFEP FF
Sbjct: 317 RYHLMPIITPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFF 376
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS-K 241
Y++Y+ + + A+D L W G VES++R L +ER+ + L H P + +
Sbjct: 377 GKYKHYIVLLARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLEPE 435
Query: 242 PCAHCA-FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 300
P HC+ +F+GL E + +DI+ V+ K GM I V H++++
Sbjct: 436 PERHCSMWFIGLLFAKSENLNVDLTYDIKSFVDSILRQAEQLSMLKEGMWIEVKHVKKRD 495
Query: 301 IPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQ 360
+ YV P KR R + + GN SG ++P + R+ +S Q
Sbjct: 496 LHTYVSPSLLKRERKVSGTVHKNGNIAGN---GNSGSVSPRNPGNTTN-----RKRLSDQ 547
Query: 361 KQDS 364
QD+
Sbjct: 548 NQDT 551
>gi|350422462|ref|XP_003493171.1| PREDICTED: poly(A) polymerase gamma-like [Bombus impatiens]
Length = 610
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 156/378 (41%), Positives = 218/378 (57%), Gaps = 11/378 (2%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D+ VRSLNGCRV D+IL+LVPN+E+F LR +K WAKR G+YSNV G+LGGV+
Sbjct: 193 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVS 252
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQLYPNAV + L+ +FF V++ W+WP PV+L D LG+ VWDPR N D
Sbjct: 253 WAMLVARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISD 312
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS++NVS ST +M + F+ G +I EE+ + KA W LFEP FF
Sbjct: 313 RYHLMPIITPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFF 372
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS-K 241
Y++Y+ + + A+D L W G VES++R L +ER+ + L H P + +
Sbjct: 373 GKYKHYIVLLARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLKPE 431
Query: 242 PCAHCA-FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 300
P HC+ +F+GL E + +DI+ V+ K GM I H++RK
Sbjct: 432 PEGHCSMWFIGLLFAKSENLNIDLTYDIKSFVDSILRQAEQLNLLKDGMWIEAKHVKRKD 491
Query: 301 IPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQ 360
+ YV P KR R + + GN TGS R +Q R+ +S Q
Sbjct: 492 LHTYVSPSLLKRERKISGNVHKNGNIAGNG-NTGSVSPR-------NQGDLTNRKRLSDQ 543
Query: 361 KQDSLSPDHLAPSSVRSG 378
D+ A + ++G
Sbjct: 544 STDTYGKKRRATDNEQAG 561
>gi|307183537|gb|EFN70300.1| Poly(A) polymerase gamma [Camponotus floridanus]
Length = 603
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 143/314 (45%), Positives = 197/314 (62%), Gaps = 3/314 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D+ VRSLNGCRV D+IL+LVPN+E+F LR +K WAKR G+YSNV G+LGGV+
Sbjct: 196 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVS 255
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQLYPNAV + L+ +FF V++ W+WP PV+L D LG+ VWDPR N D
Sbjct: 256 WAMLVARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVSD 315
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS++NVS ST +M + F+ G I EE+ + KA W LFEP FF
Sbjct: 316 RYHLMPIITPAYPQQNSTFNVSVSTRTIMQEAFENGLAITEEIIIGKATWDKLFEPPNFF 375
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS-K 241
Y++Y+ + +++A+D L W G VES++R L +ER+ + L H P + +
Sbjct: 376 GKYKHYIVLLARSSSAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLDPE 434
Query: 242 PCAHCA-FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 300
P HC+ +F+GL E + +DI+ VE + K GM I H++RK
Sbjct: 435 PGKHCSMWFIGLSFAKSESLNIDLTYDIKSFVETIERQAEQISMLKEGMWIEAKHVKRKD 494
Query: 301 IPPYVFPEGYKRTR 314
+ YV KR R
Sbjct: 495 LHTYVSSSLVKRER 508
>gi|410900416|ref|XP_003963692.1| PREDICTED: poly(A) polymerase gamma-like [Takifugu rubripes]
Length = 861
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 210/335 (62%), Gaps = 9/335 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN E+F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 186 SILKNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGV 245
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNAV + LV +FF V++ W WPNPV+L +++ L VWDPR N
Sbjct: 246 SWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPS 305
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST +M ++F+YG ++ +E+ KA+WS LFEP F
Sbjct: 306 DRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKAEWSKLFEPPHF 365
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ Y++Y+ + A+ ++ L W G VES++R L +ER+ Y L H P + + +
Sbjct: 366 FQKYKHYIVLAASASTEENHLEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPGSKE 424
Query: 242 PCAHCAF----FMGLQRKP---GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
F F+G+ K E V +DI+ + N K GM+I +
Sbjct: 425 NRNENDFVSMWFIGIIFKKMENAESVNIDLTYDIQSFTDTVYRQANNINMLKNGMKIEAT 484
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGN 329
H+++KQ+ Y+ PE ++ + +A RSS G+
Sbjct: 485 HVKKKQLNLYLPPELVQKKKR-SIADLNRSSNGGS 518
>gi|340709674|ref|XP_003393427.1| PREDICTED: poly(A) polymerase gamma-like [Bombus terrestris]
Length = 617
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/314 (45%), Positives = 196/314 (62%), Gaps = 3/314 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D+ VRSLNGCRV D+IL+LVPN+E+F LR +K WAKR G+YSNV G+LGGV+
Sbjct: 197 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVS 256
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQLYPNAV + L+ +FF V++ W+WP PV+L D LG+ VWDPR N D
Sbjct: 257 WAMLVARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISD 316
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS++NVS ST +M + F+ G +I EE+ + KA W LFEP FF
Sbjct: 317 RYHLMPIITPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFF 376
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS-K 241
Y++Y+ + + A+D L W G VES++R L +ER+ + L H P + +
Sbjct: 377 GKYKHYIVLLARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLKPE 435
Query: 242 PCAHCA-FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 300
P HC+ +F+GL E + +DI+ V+ K GM I H++RK
Sbjct: 436 PEGHCSMWFIGLLFAKSENLNIDLTYDIKSFVDSILRQAEQLNLLKDGMWIEAKHVKRKD 495
Query: 301 IPPYVFPEGYKRTR 314
+ YV P KR R
Sbjct: 496 LHTYVSPSLLKRER 509
>gi|322802531|gb|EFZ22846.1| hypothetical protein SINV_14294 [Solenopsis invicta]
Length = 592
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 150/371 (40%), Positives = 216/371 (58%), Gaps = 21/371 (5%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D+ VRSLNGCRV D+IL+LVPN+E+F LR +K WAKR G+YSNV G+LGGV+
Sbjct: 184 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVS 243
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQLYPNAV + L+ +FF V++ W+WP PV+L D LG+ VWDPR N D
Sbjct: 244 WAMLVARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVSD 303
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS++NVS ST +M + F+ G I EE+ + KA W LFEP FF
Sbjct: 304 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEAFENGLAITEEIIMGKATWDKLFEPPNFF 363
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERD---TYGKLQCHPYPHEYVDT 239
Y++Y+ + + A+D L W G VES++R L M+ER+ T + +P ++
Sbjct: 364 GKYKHYIVLLAKSLTAEDQLEWCGLVESKIRHLIGMLERNPHITLAHVNPEAFPPLNPES 423
Query: 240 SKPCAHCAFFMGL---------QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 290
K C+ +F+GL + + GE + +DI+ V+ + +K GM
Sbjct: 424 GKHCS--MWFIGLSFSKCEKSEKSEKGENINVDLTYDIKSFVDTVERQAEQINMFKEGMW 481
Query: 291 ICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGN-------EYQTGSGLKRKKDP 343
I H++RK + YV P KR R + + GN G K++
Sbjct: 482 IEAKHVKRKDLNTYVSPSLLKRERKVSSGVHRNGNIAGNGNSGSVSPRNQGDTSKKRLSD 541
Query: 344 ESVDQDGPEKR 354
+++D G ++R
Sbjct: 542 QTLDACGKKRR 552
>gi|328871002|gb|EGG19374.1| polyA polymerase [Dictyostelium fasciculatum]
Length = 803
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 141/324 (43%), Positives = 202/324 (62%), Gaps = 8/324 (2%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +VD+ + SLNGCRV DQIL+LVPNV F LRC+K WA+RRGVYSNV G LGGV+W
Sbjct: 281 LKNVDDKCIVSLNGCRVTDQILRLVPNVTTFRMALRCIKLWAQRRGVYSNVLGLLGGVSW 340
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-DEAELGFSVWDPRKNRRD 122
ALL AR+CQLYPNA PS +++RFF++Y W+WP+P++LC I D +L VW+ +RD
Sbjct: 341 ALLTARICQLYPNAAPSTIINRFFKIYDGWKWPSPILLCQIQDGGQLAAKVWN---QKRD 397
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
K+H MPI+TPAYP MNS+YNVS STL ++ +F G I ++++ + +W+ L E FF
Sbjct: 398 KSHLMPILTPAYPSMNSTYNVSRSTLSLLKSEFSRGAEITKKIDSGERKWTDLVEKGDFF 457
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 242
YR YLQ+D+ A D W+GW+ES+LR L +E+ K PY + + +
Sbjct: 458 TRYRFYLQIDVSAPEEDTHRKWEGWIESKLRILISNLEQTPNMKFAI-PYAKSFANKASA 516
Query: 243 C--AHCA-FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRK 299
C FFMGLQ + + D+ G+V F I + P +E+ + +I++K
Sbjct: 517 VNGGICTCFFMGLQFNFSTAIGADKNVDLTGAVTSFTNLIKDWPGKLPTIEMKIHYIKKK 576
Query: 300 QIPPYVFPEGYKRTRHPRLASQQR 323
+P +V EG + + A+++R
Sbjct: 577 NLPVFVKDEGPEHPPKQKTAAKKR 600
>gi|347969786|ref|XP_003436462.1| AGAP013207-PA [Anopheles gambiae str. PEST]
gi|333469270|gb|EGK97235.1| AGAP013207-PA [Anopheles gambiae str. PEST]
Length = 725
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 143/328 (43%), Positives = 207/328 (63%), Gaps = 20/328 (6%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D+ +VRSLNGCRV D+IL+LVPN+++F LR +K WAKR G+YSN G+ GGV+
Sbjct: 191 LLKNLDQKSVRSLNGCRVTDEILRLVPNIDNFRLALRTIKLWAKRHGIYSNSLGYFGGVS 250
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQLYPNAV + LV +FF V++ W+WP PV+L D LGF VWDPR N +D
Sbjct: 251 WAMLVARTCQLYPNAVAATLVHKFFLVFSRWKWPQPVLLKQPDNVNLGFQVWDPRVNVQD 310
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS++NVS+ST +VM+ +F G I +++ + K W LFE FF
Sbjct: 311 RFHLMPIITPAYPQQNSTFNVSSSTRKVMLMEFNRGMQITDDIMMGKQMWEKLFEAPSFF 370
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYV 237
YR+++ + + ++NADD L W G VES++R L +ER+ + L +C+ +
Sbjct: 371 YRYRHFIVLLVTSSNADDHLEWCGLVESKIRYLIQNLERNQHINLAHVNPKCYEQHEQNS 430
Query: 238 DTS------KPCAHCAF-FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM----FWK 286
T+ KP C+ F+GL+ + E + D+ S++ F S++ + K
Sbjct: 431 ATTLNGADGKPTPFCSLWFIGLEFERSENL----NVDLTESIQSFTDSVHKHAVHIKLLK 486
Query: 287 PGMEICVSHIRRKQIPPYVFPEGYKRTR 314
GM+I H+RRKQ+ Y+ P KR R
Sbjct: 487 DGMKIEARHVRRKQLTQYLDPNLLKRER 514
>gi|13365529|dbj|BAB39138.1| poly(A) polymerase [Carassius auratus]
Length = 747
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 236/406 (58%), Gaps = 20/406 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN E+F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 189 SLLRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGV 248
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNAV + LV +FF V++ W WPNPV+L +++ L VWDPR N
Sbjct: 249 SWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPS 308
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST +M ++F+ G T+ +E+ KA WS LFEP F
Sbjct: 309 DRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKNGLTVTDEILQGKADWSKLFEPPNF 368
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ Y++Y+ + A+ ++ L W G VES++R L +ER+ Y L H P + + +
Sbjct: 369 FQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPGSKE 427
Query: 242 PCAHCAF----FMGLQRKP---GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICV 293
F F+G+ K + V +DI+ + ++ + N+ M K GM I
Sbjct: 428 NHNENEFVSMWFIGISFKKLDNSDCVNIDLTYDIQSFTDTVYRQASNINML-KDGMTIEA 486
Query: 294 SHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ---TGSGLKRKKD-----PES 345
+H+++KQ+ Y+ PE +R + L RSS G + GS L +D P S
Sbjct: 487 THVKKKQLHHYLPPELVQRKKK-SLGDINRSSNGGGSKRCSLDGSQLDSSRDTDIGTPFS 545
Query: 346 VDQDGPEKRQSISPQKQDSLS-PDHLAPSSVRSGTGSNVEPVIPDK 390
+ Q S + S+S P H + + S S V P P++
Sbjct: 546 SPTPVSKPSQPASTPEDSSISPPKHPVLAFMDSPPASEVSPPKPEQ 591
>gi|332018332|gb|EGI58937.1| Poly(A) polymerase gamma [Acromyrmex echinatior]
Length = 553
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 142/324 (43%), Positives = 201/324 (62%), Gaps = 14/324 (4%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D+ VRSLNGCRV D+IL+LVPN+E+F LR +K WAKR G+YSNV G+LGGV+
Sbjct: 194 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVS 253
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQLYPNAV + L+ +FF V++ W+WP PV+L D LG+ VWDPR N D
Sbjct: 254 WAMLVARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVAD 313
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS++NVS ST +M + F+ G I EE+ + KA W LFEP FF
Sbjct: 314 RYHLMPIITPAYPQQNSTFNVSVSTRTIMQEAFENGLAITEEIIMGKATWDKLFEPPNFF 373
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERD---TYGKLQCHPYPHEYVDT 239
Y++Y+ + + +A+D L W G VES++R L M+ER+ T + +P ++
Sbjct: 374 GKYKHYIVLLAKSLSAEDQLEWCGLVESKIRHLIGMLERNPHITLAHVNPEAFPPLNPES 433
Query: 240 SKPCAHCAFFMGL---------QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 290
K C+ +F+GL + + GE + +DI+ V+ + +K GM
Sbjct: 434 GKHCS--MWFIGLAFSKCEKSEKSEKGENINVDLTYDIKSFVDTVERQAEQINMFKEGMW 491
Query: 291 ICVSHIRRKQIPPYVFPEGYKRTR 314
I H++RK + YV P K+ R
Sbjct: 492 IEAKHVKRKDLHTYVSPSLLKKER 515
>gi|308812011|ref|XP_003083313.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
[Ostreococcus tauri]
gi|116055193|emb|CAL57589.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
[Ostreococcus tauri]
Length = 606
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 162/429 (37%), Positives = 239/429 (55%), Gaps = 30/429 (6%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL ++D+P V+SLNGCRVADQ+L+ VPN + F LR L+ WA+RRG+YSNV GF GGV
Sbjct: 190 SVLLNLDDPGVKSLNGCRVADQLLREVPNHDAFRVALRTLRLWAQRRGIYSNVVGFFGGV 249
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-DEAELGFSVWDPRKNR 120
N A+LVARVCQLYPNA SMLV FF++++ W+W PVML I DE G VWD R N+
Sbjct: 250 NLAILVARVCQLYPNAASSMLVYSFFQLWSAWQWSTPVMLVPIVDEGLPGMRVWDERVNK 309
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
++ M I+TPAYP NS++NVS STL V+ +F+ G + + + LNK +W L+
Sbjct: 310 AERYQLMKILTPAYPAQNSTFNVSVSTLEVLKAEFRRGKEVTKNILLNKCKWEDLWIKTS 369
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
F Y++YL V I A A+D W+GWV SR++ L IE T G++ HP Y D
Sbjct: 370 FLTMYKHYLMVSISAKTAEDFKKWEGWVGSRVKLLIQGIENCTGGQMLAHPGTARYKDPE 429
Query: 241 K-PCAHCAFFMGLQRKPGEV-VQEGQQFDIRGSVEEFKLSINMYM-------FWKPGMEI 291
K H F+GL P + +E ++ +VE+F++ + +M W PGM+
Sbjct: 430 KEENTHVILFLGLF--PSSLKKKEKVAMNLNPAVEQFQMQVTSWMDRATGESNWVPGMQA 487
Query: 292 CVSHIRRKQIPPYVFPE--GYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQD 349
V H++RK +P +V E GY + + + +E + K++KD S D++
Sbjct: 488 MVRHVKRKDLPGFVREEIDGYVKDVY-----------DESEVSAEAASKKRKDGGSEDEN 536
Query: 350 GPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVE--PVIPDKRVLNQEIAEGGDVSNSS 407
+ P+ + + + D AP+ +R+ V ++ + N+ A GG +
Sbjct: 537 NIADDE--EPKAKKAATEDK-APTKIRADDHDEVAGLAMLAHDELENKSTAVGGKSGGAG 593
Query: 408 VITSVTSEV 416
+ S V
Sbjct: 594 IKVSFAQVV 602
>gi|41054866|ref|NP_956915.1| poly(A) polymerase gamma [Danio rerio]
gi|34783795|gb|AAH56818.1| Poly(A) polymerase gamma [Danio rerio]
Length = 744
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 210/335 (62%), Gaps = 11/335 (3%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN E+F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 189 SLLRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGV 248
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNAV + LV +FF V++ W WPNPV+L +++ L VWDPR N
Sbjct: 249 SWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPS 308
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST +M ++F+ G T+ +E+ KA WS LFEP F
Sbjct: 309 DRYHLMPIITPAYPQQNSTYNVSTSTRTIMNEEFKNGLTVTDEILQGKADWSKLFEPPNF 368
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ Y L H P + + +
Sbjct: 369 FQQYRHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPGSKE 427
Query: 242 PCAHCAF----FMGLQRKP---GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICV 293
F F+G+ K + V +DI+ + ++ + N+ M K GM I
Sbjct: 428 NRNENDFVSMWFIGISFKKLDNSDCVNIDLTYDIQSFTDTVYRQASNINML-KDGMTIEA 486
Query: 294 SHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENG 328
+H+++KQ+ Y+ PE +R + L RSS G
Sbjct: 487 THVKKKQLHHYLPPELVQRKKK-SLGDINRSSNGG 520
>gi|170031421|ref|XP_001843584.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
gi|167869844|gb|EDS33227.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
Length = 661
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 151/390 (38%), Positives = 229/390 (58%), Gaps = 35/390 (8%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D +VRSLNGCRV D+IL+LVPN+++F LR +K WAK+ G+YSN G+ GGV+
Sbjct: 201 LLKNLDPKSVRSLNGCRVTDEILRLVPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVS 260
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQLYPNAV + LV +FF V++ W+WP PV+L D LGF VWDPR N +D
Sbjct: 261 WAMLVARTCQLYPNAVAATLVHKFFLVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQD 320
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS++NVS+ST +VM+++F G I +E+ L KA W LFE FF
Sbjct: 321 RFHLMPIITPAYPQQNSTFNVSSSTRKVMLNEFNRGMQITDEIMLGKAGWDKLFEAPSFF 380
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV----- 237
YR+++ + + + NADD L W G VES++R L +ER+ + L H P +
Sbjct: 381 FKYRHFIVLLVTSNNADDHLEWCGLVESKIRYLIQNLERNLHINL-AHVNPKCFEQQEQN 439
Query: 238 ------DTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM----FWKP 287
+ K +F+GL+ + E + D+ S++ F +++ + K
Sbjct: 440 QKDDGGEGGKTTLCSLWFIGLEFERSENL----NVDLTESIQNFTDAVHKHAVHIKVLKD 495
Query: 288 GMEICVSHIRRKQIPPYVFPEGYKRTRH--------PRLASQQRSSENGNEYQTGSGLKR 339
GM+I H+RRKQ+ Y+ P KR R L + ++ N +G+ L++
Sbjct: 496 GMKIEARHVRRKQLNQYLDPNLLKRERKNSDSGLGSTALNTSGGAAAGNNTSGSGTTLRK 555
Query: 340 KKDPESVDQDGPEKRQSISPQKQDSLSPDH 369
++ E++ + +++ +K + S DH
Sbjct: 556 RQSSEAL-------QAAVASKKGRNDSFDH 578
>gi|13365531|dbj|BAB39139.1| poly(A) polymerase [Carassius auratus]
Length = 747
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 236/406 (58%), Gaps = 20/406 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN E+F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 189 SLLRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGV 248
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNAV + LV +FF V++ W WPNPV+L +++ L VWDPR N
Sbjct: 249 SWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPS 308
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST +M ++F+ G T+ +E+ KA WS LFEP F
Sbjct: 309 DRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKNGLTVTDEILQGKADWSKLFEPPNF 368
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ Y++Y+ + A+ ++ L W G VES++R L +ER+ Y L H P + + +
Sbjct: 369 FQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPGSKE 427
Query: 242 PCAHCAF----FMGLQRKP---GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICV 293
F F+G+ K + V +DI+ + ++ + N+ M K GM I
Sbjct: 428 NHNENEFVSMWFIGISFKKLDNSDCVNIDLTYDIQSFTDTVYRQASNINML-KDGMTIEA 486
Query: 294 SHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ---TGSGLKRKKD-----PES 345
+H+++KQ+ Y+ E +R + L RSS G + GS L +D P S
Sbjct: 487 THVKKKQLHHYLPSELVQRKKK-SLGEINRSSNGGGSKRCSLDGSQLDSSRDTDIGTPFS 545
Query: 346 VDQDGPEKRQSISPQKQDSLS-PDHLAPSSVRSGTGSNVEPVIPDK 390
+ Q +S + S++ P H + S T S V P P++
Sbjct: 546 SPTPVSKPCQPVSTPEDSSITPPKHPVLVFIDSPTASEVSPPKPEQ 591
>gi|405945155|gb|EKC17170.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 745
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 138/332 (41%), Positives = 207/332 (62%), Gaps = 10/332 (3%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L +++E VRSLNGCRV D+IL LVPN F TLR +K WAK++G+YSN GFLGGV
Sbjct: 186 SLLKNLNEKCVRSLNGCRVTDEILHLVPNQHSFRMTLRAIKLWAKKKGIYSNALGFLGGV 245
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI---DEAELGFSVWDPRK 118
+WA+LVARVCQLYPNA P+ L+ +FF + W WP PV+L A+ ++ L F VWDPR
Sbjct: 246 SWAMLVARVCQLYPNAAPATLLHKFFMIIHKWNWPQPVLLKALVHENKFNLSFPVWDPRV 305
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP 178
N D+ H MPIITPAYP NS++NV+ ST +M ++ + G I ++ + +W ALFEP
Sbjct: 306 NTSDRFHLMPIITPAYPQQNSTFNVTLSTRSIMTEELKDGLEIVSKIYEGREEWGALFEP 365
Query: 179 YLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYV 237
FF+ Y++Y+ + A D L W G+VES++R L +ER+ KL HP P +
Sbjct: 366 SNFFQKYKHYIVLTASAVEEKDYLEWHGYVESKIRLLVGNLERNPCIKLAHVHPSPLGPL 425
Query: 238 DTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMF----WKPGMEICV 293
+ S C +F+GL ++ + Q D+ ++ F +++ + + K GM++ +
Sbjct: 426 NESDGEYLCRWFIGLTF--VKIENQNQNVDLTFDIQSFTNTVHKHAYHINLMKDGMKVEI 483
Query: 294 SHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
H++R+Q+ YV P+ +++ +A + RSS
Sbjct: 484 KHVKRRQLDLYVPPKILLQSKRAAVAQEHRSS 515
>gi|452825557|gb|EME32553.1| poly(A) polymerase [Galdieria sulphuraria]
Length = 584
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 147/354 (41%), Positives = 213/354 (60%), Gaps = 45/354 (12%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L +VD+ T RS+NG RV D IL+LVPNVE F TTLR +KFWAK RG+YSNV GFLGGV
Sbjct: 197 SILRNVDDETQRSVNGVRVTDAILRLVPNVETFRTTLRAVKFWAKNRGIYSNVLGFLGGV 256
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE--LGFSVWDPRKN 119
+WA+LVAR+CQLYP+A ++++SRFFRVY+ W+WPNPV+L +I + GF VW+P
Sbjct: 257 SWAILVARICQLYPHAAANVILSRFFRVYSQWKWPNPVLLTSISPGKPSCGFKVWNPAVF 316
Query: 120 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV-------------- 165
D+ H MP+ITPAYP MNS++NVS +TLR++ ++ G I +++
Sbjct: 317 PADRKHLMPVITPAYPSMNSTHNVSRTTLRIIQEEIHRGLEITDKILCQSNSSRKTISTE 376
Query: 166 --------------------ELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWK 205
E WS LFE FF ++NYLQ+++++ A++ W
Sbjct: 377 DTENDQTTQVEHSEETNLVKETEVMTWSKLFERTDFFSKFKNYLQINVISGTAENQRKWH 436
Query: 206 GWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC-AFFMGLQ----RKPGEVV 260
G+VES+LR LTL +E ++ + +PYP Y T C +FF+GL + P +
Sbjct: 437 GFVESKLRVLTLKLEILSHTLI--YPYPVPY--TRPGVQFCESFFIGLSFSLPKLPNQNG 492
Query: 261 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 314
+ ++ D+ G V E+ + + F ME+ V H++RK +P YVF + R+R
Sbjct: 493 SKERKIDMSGPVSEWVNYVLSWPFRTSDMEVSVEHVKRKFLPEYVFKDENHRSR 546
>gi|301095250|ref|XP_002896726.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
gi|262108787|gb|EEY66839.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
Length = 343
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 148/333 (44%), Positives = 204/333 (61%), Gaps = 20/333 (6%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
VL +DE +VRS NG RV ++IL+LVPN E F TTL +K WA+ RG+YSNV GFLGGVN
Sbjct: 6 VLRGMDEASVRSCNGVRVTERILQLVPNQERFRTTLIAVKHWARIRGIYSNVLGFLGGVN 65
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-AELGFSVWDPRKNRR 121
WA+LVAR+CQ YPN++P+ L+SRFFR+Y MW WPNP+ML +D LGFS W+P+ N R
Sbjct: 66 WAILVARICQFYPNSLPASLLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNPKINVR 125
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MPIITPAYP +NSSYNV STL V+ +F G E+E K W+ LF F
Sbjct: 126 DRSHLMPIITPAYPALNSSYNVMASTLCVLKTEFDRGLDRTLEIETKKFSWAKLFVAPAF 185
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH--EYVDT 239
F+ +++L+V+I A +A D W GWVESRLR L L +E ++ HP+ +++DT
Sbjct: 186 FQRSKHFLRVEITARSAQDFDGWFGWVESRLRHLFLRLE--ALSDIRIHPFARFFDFIDT 243
Query: 240 --------SKPCAHCAF-FMGLQR---KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKP 287
SK H ++ F+GL+ K V D+ + +F + +
Sbjct: 244 KDTRPESSSKCEVHTSWLFIGLKFPAPKAAPVTGATHSVDLTSVIRDFATYTDQWEGRHG 303
Query: 288 GMEICVSHIRRKQIPPYVF---PEGYKRTRHPR 317
GM++ + H+ R QIP +V G ++H R
Sbjct: 304 GMDMQIDHVTRSQIPEWVLESVASGADDSKHVR 336
>gi|348680417|gb|EGZ20233.1| hypothetical protein PHYSODRAFT_442904 [Phytophthora sojae]
Length = 343
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 198/318 (62%), Gaps = 17/318 (5%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE +VRS NG RV ++IL+LVPN E F TTL +K WA+ RG+YSNV GFLGGVNW
Sbjct: 7 LRGLDESSVRSCNGVRVTERILQLVPNQERFRTTLIAVKHWARVRGIYSNVLGFLGGVNW 66
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-AELGFSVWDPRKNRRD 122
A+LVAR+CQ YPN++P+ L+SRFFR+Y MW WPNP+ML +D LGFS W+P+ N RD
Sbjct: 67 AILVARICQFYPNSLPASLLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNPKINVRD 126
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
++H MPIITPAYP +NSSYNV STL ++ +F G E+E K+ W+ LF +FF
Sbjct: 127 RSHLMPIITPAYPALNSSYNVMASTLHILKAEFGKGFNRTLEIETKKSSWAKLFIAPVFF 186
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY------ 236
+ +++L+V I A NA+D W GWVESRLR L L +E +L+ HP+ +
Sbjct: 187 QRSKHFLRVQITANNAEDFDGWFGWVESRLRHLFLRLE--ALPELRIHPFARFFDFGETK 244
Query: 237 ----VDTSKPCAHCAF-FMGLQR-KPGEVVQEG--QQFDIRGSVEEFKLSINMYMFWKPG 288
+SK H ++ F+GL P V G D+ + +F + + G
Sbjct: 245 GATPEGSSKREVHTSWLFIGLGFPAPNPVAATGGTHDVDLTSVIRDFAFYTDQWEARHGG 304
Query: 289 MEICVSHIRRKQIPPYVF 306
M++ + H+ R QIP +V
Sbjct: 305 MDMQIDHVTRSQIPEWVL 322
>gi|449496519|ref|XP_002196793.2| PREDICTED: poly(A) polymerase gamma [Taeniopygia guttata]
Length = 746
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 155/372 (41%), Positives = 221/372 (59%), Gaps = 20/372 (5%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +D +RSLNG RV D+IL+LVPN+E+F TLR +K WAKRRGVYSN+ GFLGGV+W
Sbjct: 189 LKSLDIRCIRSLNGSRVTDEILRLVPNLENFRLTLRAVKLWAKRRGVYSNIMGFLGGVSW 248
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+LVAR+CQLYPNA+ S L+++FF +++ W WP PV+L ++E+ L VWDPR N D+
Sbjct: 249 AMLVARICQLYPNALASTLINKFFLIFSKWDWPKPVLLKRLEESFLNLPVWDPRVNPSDR 308
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 183
H MPIITPAYP NS+YNVS ST VM+++FQ G + +E+ K+ WS LFEP FF+
Sbjct: 309 YHVMPIITPAYPQQNSTYNVSVSTRAVMVEEFQRGLEVTDEILKGKSDWSKLFEPLNFFQ 368
Query: 184 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERD---TYGKLQCHPYPHEYVDTS 240
Y++Y+ + A + L W G V+S++R L +ER+ T +Q +P V
Sbjct: 369 KYKHYIVLTASAFTEEHHLNWIGLVKSKIRVLVGNLERNEFITIAHVQPQSFPGNEVLYK 428
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI----NMYMFWKPGMEICVSHI 296
+ +F+GL K E + D+ ++ F ++ + K GM+I +++
Sbjct: 429 QNAYVSMWFLGLVFKKAESAVK-TNVDLTHGIQSFTDTVYRQASALNILKEGMKIEATYV 487
Query: 297 RRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGL--KRKKDPESVDQDGPEKR 354
+RKQ+ Y P G + R +QR S+ Q SGL KR ES DG + R
Sbjct: 488 KRKQL-HYFLPAGTLQKR-----KKQRVSDIS---QNNSGLQCKRSSLGESCS-DGSKDR 537
Query: 355 QSISPQKQDSLS 366
S +P SL+
Sbjct: 538 DSRTPSNSSSLN 549
>gi|209878111|ref|XP_002140497.1| poly(A) polymerase protein [Cryptosporidium muris RN66]
gi|209556103|gb|EEA06148.1| poly(A) polymerase protein, putative [Cryptosporidium muris RN66]
Length = 647
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 135/316 (42%), Positives = 202/316 (63%), Gaps = 21/316 (6%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
+VDE T RSLNGCRV D IL+LVPN E F T LR +K W+K RG+YSNV G+LGG++WA+
Sbjct: 196 NVDEKTARSLNGCRVNDMILQLVPNKESFRTALRFVKHWSKSRGIYSNVLGYLGGISWAI 255
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE------LGFSVWDPRKN 119
L AR+CQLYPN+ P+ +++RFF VY W+W NPV+LC I E +GF VW+P N
Sbjct: 256 LTARICQLYPNSAPNQIINRFFYVYKAWQWKNPVILCEIKEVPKNSPGLMGFRVWNPNTN 315
Query: 120 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 179
+D+ H MPIITPA+P MNS++NV+ +TLRV+ ++ Q G+ + +E+E +AQWS L+ PY
Sbjct: 316 PQDRAHLMPIITPAFPSMNSTHNVTQTTLRVITEELQRGSELVKEIENERAQWSDLWSPY 375
Query: 180 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH--EYV 237
+FFE++++++QV ++A + W GW+ES++R L +E T+ LQ P+P +
Sbjct: 376 MFFENHKHFIQVKMLANSEQAFQKWTGWIESKIRFLVRKLE--TFKGLQVRPWPKVIQES 433
Query: 238 DTSKPCAHCA--FFMGL------QRKPGEVVQEGQQFDIRGSVEEFK---LSINMYMFWK 286
D K A ++GL G+ D+RG++ +F ++ N +K
Sbjct: 434 DNQKDGFQFAQCMYIGLVLCTTSGNNNGKSTGITPVVDLRGAILDFVGFIMNWNEVEIYK 493
Query: 287 PGMEICVSHIRRKQIP 302
+++ V H+R K +P
Sbjct: 494 DSIDLKVKHLRFKDLP 509
>gi|54020874|ref|NP_001005684.1| poly(A) polymerase gamma [Xenopus (Silurana) tropicalis]
gi|49522894|gb|AAH75107.1| poly(A) polymerase beta (testis specific) [Xenopus (Silurana)
tropicalis]
Length = 752
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 142/332 (42%), Positives = 202/332 (60%), Gaps = 10/332 (3%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D +RSLNGCRV D+IL LVPN E+F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 186 SRLRNLDIRCIRSLNGCRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGV 245
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +++ L VWDPR N
Sbjct: 246 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPA 305
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVS ST VM+++F+ G ++ +E+ L + WS LFEP F
Sbjct: 306 DRCHLMPIITPAYPQQNSTYNVSISTRSVMVEEFKQGLSVTDEILLGRCDWSKLFEPPNF 365
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F Y++Y+ + A+ + L W G VES++R L +ER+++ L H P +
Sbjct: 366 FHKYKHYIVLTASASTEEHHLEWVGLVESKIRVLVGNLERNSFITL-AHVNPQSFPGNRD 424
Query: 242 PCAHCAF----FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI----NMYMFWKPGMEICV 293
C + F+G+ K E E D+ ++ F ++ N K GM I
Sbjct: 425 HCKDNEYVSMWFLGIIFKKVENA-ESVNIDLTHDIQSFTDTVYRQANNINMLKKGMRIEA 483
Query: 294 SHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
+H++RKQ+ Y+ E ++ + + RS+
Sbjct: 484 THVKRKQLHHYLHAEVLQKRKKQSVPDINRSA 515
>gi|344291804|ref|XP_003417620.1| PREDICTED: poly(A) polymerase gamma-like [Loxodonta africana]
Length = 741
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 200/331 (60%), Gaps = 8/331 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPA 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
H+++KQ+ Y+ E ++ + L+ RSS
Sbjct: 486 HVKKKQLHHYLPSETLQKKKKQSLSDVSRSS 516
>gi|281200800|gb|EFA75017.1| polyA polymerase [Polysphondylium pallidum PN500]
Length = 757
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 139/329 (42%), Positives = 194/329 (58%), Gaps = 27/329 (8%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L ++D+ ++ SLNGCRV D+IL LVP+ F LR +K WA+RRG+YSNV GFLGGV+W
Sbjct: 198 LKNLDDQSITSLNGCRVTDKILTLVPSRATFRMALRFIKLWAQRRGIYSNVLGFLGGVSW 257
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRW----PNPVMLCAI-DEAELGFSVWDPRK 118
ALL AR+CQLYPNA PS +++RFF++Y WRW P PV+LC I D VW+
Sbjct: 258 ALLTARICQLYPNAAPSTIINRFFKIYETWRWGVPGPTPVLLCPIQDGGIFAAKVWN--- 314
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP 178
+RDK+H MPI+TPAYP MNS+YNVS STL ++ D+F GN I +++E +A W+ L E
Sbjct: 315 QKRDKSHLMPILTPAYPSMNSTYNVSKSTLSLLKDEFARGNQIAQKLESGEANWNKLLEK 374
Query: 179 YLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY-- 236
FF Y+ YLQ+D A N ++ W+GW+ES+LR+L +E+ K P+P +
Sbjct: 375 SDFFSRYQFYLQIDCSAQNEEEHRKWEGWIESKLRKLISFLEQTPKMKFAI-PFPKSFEN 433
Query: 237 ----------------VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 280
D + +FFMGL + DI +V +F I
Sbjct: 434 KPTPAATTTAANGEAVTDANNSNVCTSFFMGLGFNFSNAPGADKSVDITKAVIDFTHLIK 493
Query: 281 MYMFWKPGMEICVSHIRRKQIPPYVFPEG 309
+ P ME+ V +I+R+Q+P +V E
Sbjct: 494 DWAGKGPTMEMKVHYIKRRQLPAFVKAEA 522
>gi|13641252|gb|AAK31791.1| SRP RNA 3' adenylating enzyme/pap2 [Homo sapiens]
Length = 736
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 200/331 (60%), Gaps = 8/331 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQSEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
H+++KQ+ Y+ E ++ + L+ RSS
Sbjct: 486 HVKKKQLHHYLPAEILQKKKKQSLSDVNRSS 516
>gi|16306568|ref|NP_075045.2| poly(A) polymerase gamma [Homo sapiens]
gi|332813224|ref|XP_515496.3| PREDICTED: poly(A) polymerase gamma isoform 6 [Pan troglodytes]
gi|397521664|ref|XP_003830910.1| PREDICTED: poly(A) polymerase gamma [Pan paniscus]
gi|116242699|sp|Q9BWT3.2|PAPOG_HUMAN RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
Full=Neo-poly(A) polymerase; Short=Neo-PAP; AltName:
Full=Polynucleotide adenylyltransferase gamma; AltName:
Full=SRP RNA 3'-adenylating enzyme
gi|15080911|gb|AAK83701.1|AF312211_1 neo-poly(A) polymerase [Homo sapiens]
gi|15384858|emb|CAC59751.1| poly(A) polymerase gamma [Homo sapiens]
gi|84202581|gb|AAI11702.1| Poly(A) polymerase gamma [Homo sapiens]
gi|88682947|gb|AAI13748.1| Poly(A) polymerase gamma [Homo sapiens]
gi|119620439|gb|EAX00034.1| poly(A) polymerase gamma, isoform CRA_f [Homo sapiens]
gi|189054448|dbj|BAG37221.1| unnamed protein product [Homo sapiens]
gi|410216568|gb|JAA05503.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410265336|gb|JAA20634.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410295358|gb|JAA26279.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410346708|gb|JAA40709.1| poly(A) polymerase gamma [Pan troglodytes]
Length = 736
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 200/331 (60%), Gaps = 8/331 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
H+++KQ+ Y+ E ++ + L+ RSS
Sbjct: 486 HVKKKQLHHYLPAEILQKKKKQSLSDVNRSS 516
>gi|297667577|ref|XP_002812053.1| PREDICTED: poly(A) polymerase gamma [Pongo abelii]
Length = 736
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 200/331 (60%), Gaps = 8/331 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
H+++KQ+ Y+ E ++ + L+ RSS
Sbjct: 486 HVKKKQLHHYLPAEILQKKKKQSLSDVSRSS 516
>gi|426335656|ref|XP_004029330.1| PREDICTED: poly(A) polymerase gamma [Gorilla gorilla gorilla]
Length = 736
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 200/331 (60%), Gaps = 8/331 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
H+++KQ+ Y+ E ++ + L+ RSS
Sbjct: 486 HVKKKQLHHYLPAEILQKKKKQSLSDVSRSS 516
>gi|348563534|ref|XP_003467562.1| PREDICTED: poly(A) polymerase gamma [Cavia porcellus]
Length = 741
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 200/331 (60%), Gaps = 8/331 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
H+++KQ+ Y+ E ++ + L+ RSS
Sbjct: 486 HVKKKQLHHYLPAEILQKKKKQNLSDVSRSS 516
>gi|147905450|ref|NP_001089116.1| poly(A) polymerase gamma [Xenopus laevis]
gi|73671771|gb|AAZ80291.1| SRP 3'-adenylating protein [Xenopus laevis]
Length = 751
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 142/332 (42%), Positives = 201/332 (60%), Gaps = 10/332 (3%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D +RSLNGCRV D+IL LVPN E+F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 186 SRLRNLDIRCIRSLNGCRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGV 245
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +++ L VWDPR N
Sbjct: 246 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPA 305
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVS ST VM+++F+ G + +E+ L + WS LFEP F
Sbjct: 306 DRCHLMPIITPAYPQQNSTYNVSISTRSVMVEEFKQGLLVTDEILLGRCDWSKLFEPPNF 365
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F Y++Y+ + A+ + L W G VES++R L +ER+ + L H P +
Sbjct: 366 FHKYKHYIVLTASASTEEHHLEWVGLVESKIRVLVGNLERNNFITL-AHVNPQSFPGNRD 424
Query: 242 PCAHCAF----FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI----NMYMFWKPGMEICV 293
C + F+G+ K E E D+ ++ F ++ N K GM+I
Sbjct: 425 HCKDNEYVSMWFLGIIFKKVENA-ESVNIDLTHDIQSFTDTVYRQANNINMLKKGMKIEA 483
Query: 294 SHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
+H++RKQ+ Y+ E ++ + + RS+
Sbjct: 484 THVKRKQLHHYLPAEVVQKRKKQSVPDINRSA 515
>gi|119620435|gb|EAX00030.1| poly(A) polymerase gamma, isoform CRA_b [Homo sapiens]
Length = 743
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 200/331 (60%), Gaps = 8/331 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
H+++KQ+ Y+ E ++ + L+ RSS
Sbjct: 486 HVKKKQLHHYLPAEILQKKKKQSLSDVNRSS 516
>gi|10435509|dbj|BAB14604.1| unnamed protein product [Homo sapiens]
Length = 675
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 200/331 (60%), Gaps = 8/331 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 184 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 243
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 244 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 303
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 304 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 363
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 364 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 422
Query: 242 PCAH----CAFFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 423 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 482
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
H+++KQ+ Y+ E ++ + L+ RSS
Sbjct: 483 HVKKKQLHHYLPAEILQKKKKQSLSDVNRSS 513
>gi|395829706|ref|XP_003787987.1| PREDICTED: poly(A) polymerase gamma [Otolemur garnettii]
Length = 741
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 199/331 (60%), Gaps = 8/331 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ + L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEEHQLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
H+++KQ+ Y+ E ++ + L+ RSS
Sbjct: 486 HVKKKQLHHYLPAEILQKKKKQSLSDVSRSS 516
>gi|311252569|ref|XP_003125156.1| PREDICTED: poly(A) polymerase gamma-like [Sus scrofa]
Length = 741
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 200/331 (60%), Gaps = 8/331 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
H+++KQ+ Y+ E ++ + L+ RSS
Sbjct: 486 HVKKKQLHHYLPAEILQKKKKQSLSDVTRSS 516
>gi|213625101|gb|AAI69821.1| LOC733387 protein [Xenopus laevis]
Length = 750
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/332 (42%), Positives = 201/332 (60%), Gaps = 10/332 (3%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D +RSLNGCRV D+IL LVPN E+F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 185 SRLRNLDIRCIRSLNGCRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGV 244
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +++ L VWDPR N
Sbjct: 245 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPA 304
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVS ST VM+++F+ G + +E+ L + WS LFEP F
Sbjct: 305 DRCHLMPIITPAYPQQNSTYNVSISTRSVMVEEFKQGLLVTDEILLGRCDWSKLFEPPNF 364
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F Y++Y+ + A+ + L W G VES++R L +ER+ + L H P +
Sbjct: 365 FHKYKHYIVLTASASTEEHHLEWVGLVESKIRVLVGNLERNNFITL-AHVNPQSFPGNRD 423
Query: 242 PCAHCAF----FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI----NMYMFWKPGMEICV 293
C + F+G+ K E E D+ ++ F ++ N K GM+I
Sbjct: 424 HCKDNEYVSMWFLGIIFKKVENA-ESVNIDLTHDIQSFTDTVYRQANNINMLKKGMKIEA 482
Query: 294 SHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
+H++RKQ+ Y+ E ++ + + RS+
Sbjct: 483 THVKRKQLHHYLPAEVVQKRKKQSVPDINRSA 514
>gi|147900391|ref|NP_001091535.1| poly(A) polymerase gamma [Bos taurus]
gi|146186839|gb|AAI40626.1| PAPOLG protein [Bos taurus]
gi|296482594|tpg|DAA24709.1| TPA: poly(A) polymerase gamma [Bos taurus]
Length = 740
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 200/331 (60%), Gaps = 8/331 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
H+++KQ+ Y+ E ++ + L+ RSS
Sbjct: 486 HVKKKQLHHYLPAEILQKKKKQSLSDVTRSS 516
>gi|426223633|ref|XP_004005979.1| PREDICTED: poly(A) polymerase gamma [Ovis aries]
Length = 740
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 200/331 (60%), Gaps = 8/331 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
H+++KQ+ Y+ E ++ + L+ RSS
Sbjct: 486 HVKKKQLHHYLPAEILQKKKKQSLSDVTRSS 516
>gi|410954895|ref|XP_003984095.1| PREDICTED: poly(A) polymerase gamma [Felis catus]
Length = 762
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 200/331 (60%), Gaps = 8/331 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 208 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 267
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 268 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 327
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 328 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 387
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 388 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 446
Query: 242 PCAH----CAFFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 447 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 506
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
H+++KQ+ Y+ E ++ + L+ RSS
Sbjct: 507 HVKKKQLHHYLPAEILQKKKKQSLSDVSRSS 537
>gi|291386749|ref|XP_002709901.1| PREDICTED: poly(A) polymerase gamma [Oryctolagus cuniculus]
Length = 739
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 142/330 (43%), Positives = 199/330 (60%), Gaps = 8/330 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRS 324
H+++KQ+ Y+ E ++ + L+ RS
Sbjct: 486 HVKKKQLHHYLPAEILQKKKKQSLSDVSRS 515
>gi|296223786|ref|XP_002757774.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Callithrix jacchus]
Length = 736
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 142/330 (43%), Positives = 200/330 (60%), Gaps = 8/330 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGSKE 425
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRS 324
H+++KQ+ Y+ E ++ + L+ RS
Sbjct: 486 HVKKKQLHHYLPAEILQKKKKQSLSDVSRS 515
>gi|126303830|ref|XP_001375093.1| PREDICTED: poly(A) polymerase gamma [Monodelphis domestica]
Length = 748
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 147/348 (42%), Positives = 207/348 (59%), Gaps = 19/348 (5%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 186 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 245
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +++ L VWDPR N
Sbjct: 246 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPS 305
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + E+ K+ WS L EP F
Sbjct: 306 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTNEILQGKSDWSKLLEPPNF 365
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEY 236
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L Q P E+
Sbjct: 366 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 425
Query: 237 VDTSKPCAHCAFFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 293
S + +F+G+ + + E V +DI+ + N K GM+I
Sbjct: 426 YKESDYVS--MWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEA 483
Query: 294 SHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKK 341
+H+++KQ+ Y+ E +++ + L RS+ SGL+ K+
Sbjct: 484 THVKKKQLHHYLPAEIFQKKKKQSLQDINRSA---------SGLQSKR 522
>gi|440911569|gb|ELR61221.1| Poly(A) polymerase gamma, partial [Bos grunniens mutus]
Length = 737
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 200/331 (60%), Gaps = 8/331 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 184 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 243
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 244 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 303
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 304 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 363
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 364 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 422
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 423 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 482
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
H+++KQ+ Y+ E ++ + L+ RSS
Sbjct: 483 HVKKKQLHHYLPAEILQKKKKQSLSDVTRSS 513
>gi|195124015|ref|XP_002006489.1| GI18544 [Drosophila mojavensis]
gi|193911557|gb|EDW10424.1| GI18544 [Drosophila mojavensis]
Length = 664
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 153/395 (38%), Positives = 218/395 (55%), Gaps = 46/395 (11%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D +VRSLNGCRV D+IL LVPN+E+F LR +K WAKR G+YSN G+ GGV
Sbjct: 196 NLLKNLDPRSVRSLNGCRVTDEILALVPNIENFRLALRAIKLWAKRHGIYSNSLGYFGGV 255
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR CQLYPNA + LV +FF V++ W+WPNPV+L +D L F VWDPR N
Sbjct: 256 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHLDNVNLRFQVWDPRVNAS 315
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS++NVS ST +V++ +F G +I +E+ L + W LFE F
Sbjct: 316 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMSITDEIMLGRVGWDRLFEAPSF 375
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV---- 237
F YR+++ + + + ADD L W G VES++R L +ER + L H P +
Sbjct: 376 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERIPHIVL-AHVNPKCFELKKG 434
Query: 238 ---------------DTSKPCAHCA---------FFMGLQRKPGEVVQEGQQFDIRGSVE 273
D + A A +F+GL+ + E + D+ S++
Sbjct: 435 AATANNSQNNSGNEDDLKQQSAQAAVTTAPYCSLWFIGLEFERSENL----NIDLTESIQ 490
Query: 274 EFKLSINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGN 329
F +NM+ K GM I H++RKQ+ Y+ + KR R +S EN N
Sbjct: 491 NFTEHVNMHGVNIKMLKEGMSIVARHVKRKQLSVYLDADFLKRER--------KSMENHN 542
Query: 330 EYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDS 364
+ KRK+ + Q E+ +P+ +DS
Sbjct: 543 NFNNSMMAKRKRLSSELAQ-SQEQVPPTNPRGRDS 576
>gi|431912670|gb|ELK14688.1| Poly(A) polymerase gamma [Pteropus alecto]
Length = 741
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 199/331 (60%), Gaps = 8/331 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
H+++KQ+ Y+ E ++ + L+ RSS
Sbjct: 486 HVKKKQLHHYLPAEILQKKKKQSLSDVNRSS 516
>gi|417404307|gb|JAA48913.1| Putative polya polymerase [Desmodus rotundus]
Length = 742
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 199/331 (60%), Gaps = 8/331 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HYKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
H+++KQ+ Y+ E ++ + L+ RSS
Sbjct: 486 HVKKKQLHHYLPAEILQKKKKQSLSDVNRSS 516
>gi|427788767|gb|JAA59835.1| Putative polya polymerase [Rhipicephalus pulchellus]
Length = 817
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 136/308 (44%), Positives = 190/308 (61%), Gaps = 5/308 (1%)
Query: 1 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
+++L ++D+ VRSLNGCRV D+IL LVPN E F LR +K WAKR GVYSNV G+LGG
Sbjct: 207 VNILKNLDQKCVRSLNGCRVTDEILHLVPNRETFRLALRAIKLWAKRHGVYSNVLGYLGG 266
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNR 120
V+WA+LVAR CQLYPNA + LV +FF V++ W WP PV+L +E+ LGF VWDPR N
Sbjct: 267 VSWAMLVARTCQLYPNAAAATLVHKFFLVFSQWPWPKPVLLKQPEESRLGFPVWDPRVNV 326
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
D+ H MPIITPAYP NS++NVS STL +M +F+ G I +E+ L ++ W LFEP
Sbjct: 327 ADRFHLMPIITPAYPQQNSTFNVSVSTLTIMRQEFKQGLAITDEIMLRRSDWMKLFEPPN 386
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
FF Y++++ + + + L W G VES++R L +ER Y + H P + S
Sbjct: 387 FFGKYKHFIVLMASTQSKEHHLEWYGLVESKIRILISNLERHPYIAI-AHVNPESF-PPS 444
Query: 241 KPCA---HCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIR 297
+P +F+GLQ E V +D R V+ K +K ME+ + ++R
Sbjct: 445 EPEGDKLQSMWFIGLQFNKTEHVNIDLTYDTRSFVDTVKRQATAINIFKQDMEVDIKYVR 504
Query: 298 RKQIPPYV 305
R+++ Y+
Sbjct: 505 RRELVRYL 512
>gi|449018860|dbj|BAM82262.1| nuclear poly(A) polymerase [Cyanidioschyzon merolae strain 10D]
Length = 561
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 145/328 (44%), Positives = 200/328 (60%), Gaps = 34/328 (10%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
+VL +VD+ T RSLNG RV D IL+LVP+V+ F TTLRC+KFWAKRRG+YSNV G+LGGV
Sbjct: 192 AVLRNVDDATQRSLNGVRVTDSILELVPDVDTFRTTLRCIKFWAKRRGIYSNVLGYLGGV 251
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELG----FSVWDPR 117
WA+LVARVCQLYPNA ++++S FFR+Y+ W+WP PV LC I + VWDP
Sbjct: 252 AWAMLVARVCQLYPNATAAVVLSAFFRLYSQWQWPKPVKLCPIIRHQHAGLRQLKVWDP- 310
Query: 118 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV---------ELN 168
+ RD+ H MPIITPAYP MNS+YNV+ STLR+MM++F G IC +V ++
Sbjct: 311 TDPRDRRHLMPIITPAYPSMNSTYNVTHSTLRIMMEEFARGQQICADVLAAAGSDGTGVS 370
Query: 169 KAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQ 228
W L EP FF Y++YLQ++I A N DDL W+G VESRLR L +E +
Sbjct: 371 PRDWERLLEPSDFFARYKHYLQIEITAGNMDDLKKWRGHVESRLRLLVQRLE--VLPPVS 428
Query: 229 CHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQE----GQQFDIRGSVEEFKLSIN---- 280
HP+P + + F+ GL+ + ++ +E + D+ VE + + +
Sbjct: 429 VHPWP----EADERGTSVFFYFGLRLETDKIAREEGTKRARIDLNSPVESWLSTPDPRDT 484
Query: 281 ---MYMFW---KPGMEICVSHIRRKQIP 302
+ W P M + V+ ++R Q+P
Sbjct: 485 RSVPVLHWPERTPDMLVHVTPLKRAQLP 512
>gi|354473991|ref|XP_003499215.1| PREDICTED: poly(A) polymerase gamma [Cricetulus griseus]
Length = 739
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 141/321 (43%), Positives = 202/321 (62%), Gaps = 10/321 (3%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY---VD 238
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 239 TSKPCAHCA-FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI----NMYMFWKPGMEICV 293
+K + + +F+G+ + E EG D+ ++ F ++ N+ K GM+I
Sbjct: 426 HNKANNYVSMWFLGIIFRRVEHA-EGVNIDLTYDIQSFTDTVYRQANIINMLKDGMKIEA 484
Query: 294 SHIRRKQIPPYVFPEGYKRTR 314
+H+++KQ+ Y+ E ++ +
Sbjct: 485 THVKKKQLHHYLPAEILQKKK 505
>gi|26330928|dbj|BAC29194.1| unnamed protein product [Mus musculus]
Length = 739
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 145/333 (43%), Positives = 201/333 (60%), Gaps = 13/333 (3%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPTNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAHCA------FFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEIC 292
H A +F+G+ + + E V +DI+ + N K GM+I
Sbjct: 426 --HHKANNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIE 483
Query: 293 VSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
+H+++KQ+ Y+ P + + L+ RSS
Sbjct: 484 ATHVKKKQLHHYL-PAEILQKKKKSLSDVSRSS 515
>gi|344245697|gb|EGW01801.1| Poly(A) polymerase gamma [Cricetulus griseus]
Length = 709
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 141/321 (43%), Positives = 202/321 (62%), Gaps = 10/321 (3%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 179 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 238
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 239 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 298
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 299 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 358
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY---VD 238
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 359 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 417
Query: 239 TSKPCAHCA-FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI----NMYMFWKPGMEICV 293
+K + + +F+G+ + E EG D+ ++ F ++ N+ K GM+I
Sbjct: 418 HNKANNYVSMWFLGIIFRRVEHA-EGVNIDLTYDIQSFTDTVYRQANIINMLKDGMKIEA 476
Query: 294 SHIRRKQIPPYVFPEGYKRTR 314
+H+++KQ+ Y+ E ++ +
Sbjct: 477 THVKKKQLHHYLPAEILQKKK 497
>gi|412986520|emb|CCO14946.1| predicted protein [Bathycoccus prasinos]
Length = 632
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 135/324 (41%), Positives = 194/324 (59%), Gaps = 15/324 (4%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L+ +D+ V+SL GCRVAD +LKLV N + LR L+ WA RRGVYSNV GF GGVN
Sbjct: 187 ILHGLDDAGVKSLAGCRVADSLLKLVTNHSEYRIALRALRLWAARRGVYSNVVGFFGGVN 246
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAEL----GFSVWDPRK 118
A+LVARVCQLYPNA SMLV FF+++ W W PVML ++D A G WD R
Sbjct: 247 LAILVARVCQLYPNASASMLVYSFFQIWDNWVWTTPVMLTSLDIAPKDQIPGLRHWDERV 306
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP 178
N+ ++ M IITPAYP NS++NVS+STL V+ +F+ G + +V + +A+W+ ++
Sbjct: 307 NKPERYQLMKIITPAYPAQNSTFNVSSSTLEVLKREFKRGKIVTGKVLIGEAKWTDVWSD 366
Query: 179 YLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 238
FF Y+ YLQ+ + A N +D W+GWV SRL+ L +E + G + HP ++ D
Sbjct: 367 VQFFAKYKTYLQLIVTADNEEDFKKWEGWVGSRLKNLVQGVETFSEGAMMAHPGVKKFYD 426
Query: 239 TSKPC-AHCAFFMGLQRKPGEV---VQEGQQFDIRGSVEEFKLSINMYM-------FWKP 287
K HC F GL P +E ++ ++ ++E F++++ Y+ WKP
Sbjct: 427 PEKDKEVHCNVFFGLFPNPSTTSGDAREKKKINLNPAIENFQMTVGNYIDRATGSVNWKP 486
Query: 288 GMEICVSHIRRKQIPPYVFPEGYK 311
GM + + +R+K IP + PEG K
Sbjct: 487 GMGVQIKLLRKKDIPSWALPEGGK 510
>gi|332864603|ref|XP_003318331.1| PREDICTED: poly(A) polymerase beta [Pan troglodytes]
gi|397498031|ref|XP_003819800.1| PREDICTED: poly(A) polymerase beta [Pan paniscus]
Length = 637
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 137/303 (45%), Positives = 194/303 (64%), Gaps = 8/303 (2%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 252
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNAV S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 253 LVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 312
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I E+ L+KA+WS LFE FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKY 372
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A+ L W G VES++R L +E++ + L Q P P E D
Sbjct: 373 KHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDME 432
Query: 241 KPCAHCAFFMGLQR-KPGEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRR 298
+ C +GL++ + E++ +DI+ + ++ ++N MF + GM+I H+RR
Sbjct: 433 EFCTMWVIGLGLKKPENSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAMHLRR 491
Query: 299 KQI 301
K++
Sbjct: 492 KEL 494
>gi|226494207|ref|NP_766143.2| poly(A) polymerase gamma [Mus musculus]
gi|81885554|sp|Q6PCL9.1|PAPOG_MOUSE RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
Full=Polynucleotide adenylyltransferase gamma; AltName:
Full=SRP RNA 3'-adenylating enzyme
gi|37589275|gb|AAH59271.1| Poly(A) polymerase gamma [Mus musculus]
gi|73671773|gb|AAZ80292.1| SRP 3'-adenylating protein [Mus musculus]
gi|148675952|gb|EDL07899.1| poly(A) polymerase gamma, isoform CRA_b [Mus musculus]
Length = 739
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/333 (43%), Positives = 201/333 (60%), Gaps = 13/333 (3%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAHCA------FFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEIC 292
H A +F+G+ + + E V +DI+ + N K GM+I
Sbjct: 426 --HHKANNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIE 483
Query: 293 VSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
+H+++KQ+ Y+ P + + L+ RSS
Sbjct: 484 ATHVKKKQLHHYL-PAEILQKKKKSLSDVSRSS 515
>gi|260803790|ref|XP_002596772.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
gi|229282032|gb|EEN52784.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
Length = 493
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/316 (45%), Positives = 194/316 (61%), Gaps = 12/316 (3%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D+ VRSLNGCRV D++L LVPN E+F LR +K WAKRRGVYSNV GFLGGV+
Sbjct: 176 LLKNLDQRCVRSLNGCRVTDEMLHLVPNRENFRLALRAIKLWAKRRGVYSNVLGFLGGVS 235
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-AELGFSVWDPRKNRR 121
WA+LVAR CQLYPNA+ S L+ +FF V++ W WP PV+L IDE LGF VWDPR N
Sbjct: 236 WAMLVARTCQLYPNAIASTLIHKFFLVFSRWEWPQPVLLKQIDENNRLGFQVWDPRTNPM 295
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVS ST +M ++F+ G + +E+ KA W LFEP F
Sbjct: 296 DRFHLMPIITPAYPQQNSTYNVSLSTRAIMQEEFKIGLQVTQEIFEGKATWDKLFEPGSF 355
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY--VDT 239
F Y++Y+ + A + + L W G VES++R L +ER Y L H P +Y ++
Sbjct: 356 FGKYKHYIVLSTSATSKEHHLEWVGLVESKVRILIGNLERTAYIAL-AHVNPKQYPPLNP 414
Query: 240 SKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMF----WKPGMEICVSH 295
+ +F+GLQ EG D+ ++ F +++ K GM+I
Sbjct: 415 QEDVFVTNWFIGLQFNK----IEGGNIDLTFEIQSFTDTVHRQAISNGTLKEGMKIEARS 470
Query: 296 IRRKQIPPYVFPEGYK 311
+RRKQ+ Y+ P K
Sbjct: 471 VRRKQLGEYLPPSLLK 486
>gi|157822073|ref|NP_001100714.1| poly(A) polymerase gamma [Rattus norvegicus]
gi|149044811|gb|EDL97997.1| poly(A) polymerase gamma (predicted) [Rattus norvegicus]
Length = 739
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/333 (43%), Positives = 201/333 (60%), Gaps = 13/333 (3%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAHCA------FFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEIC 292
H A +F+G+ + + E V +DI+ + N K GM+I
Sbjct: 426 --HHKANNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIE 483
Query: 293 VSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
+H+++KQ+ Y+ P + + L+ RSS
Sbjct: 484 ATHVKKKQLHHYL-PAEILQKKKKSLSDVSRSS 515
>gi|218847770|ref|NP_001136382.1| poly(A) polymerase alpha [Xenopus (Silurana) tropicalis]
gi|197246240|gb|AAI68811.1| Unknown (protein for MGC:188992) [Xenopus (Silurana) tropicalis]
Length = 732
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/322 (44%), Positives = 197/322 (61%), Gaps = 18/322 (5%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 189 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 248
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 249 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 308
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L KA+WS LF+ FF+ Y
Sbjct: 309 LMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLGKAEWSKLFDAPNFFQKY 368
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E +T
Sbjct: 369 KHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPSE--NTE 426
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 427 KEEFRTMWVIGLVFKKME-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ENEMKIAAMH 484
Query: 296 IRRKQ----IPPYVFPEGYKRT 313
++RKQ +P +V P+ K +
Sbjct: 485 VKRKQLHQLLPSHVLPKKKKHS 506
>gi|395508015|ref|XP_003758311.1| PREDICTED: poly(A) polymerase gamma [Sarcophilus harrisii]
Length = 763
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/348 (42%), Positives = 206/348 (59%), Gaps = 19/348 (5%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 201 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 260
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +++ L VWDPR N
Sbjct: 261 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPS 320
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + E+ K+ WS L EP F
Sbjct: 321 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNF 380
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEY 236
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L Q P E+
Sbjct: 381 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 440
Query: 237 VDTSKPCAHCAFFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 293
S + +F+G+ + + E V +DI+ + N K GM+I
Sbjct: 441 YKESDYVS--MWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEA 498
Query: 294 SHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKK 341
+H+++KQ+ Y+ E ++ + L RS+ SGL+ K+
Sbjct: 499 THVKKKQLHHYLPAEILQKKKKQSLQDINRSA---------SGLQSKR 537
>gi|290990211|ref|XP_002677730.1| predicted protein [Naegleria gruberi]
gi|284091339|gb|EFC44986.1| predicted protein [Naegleria gruberi]
Length = 559
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/337 (43%), Positives = 201/337 (59%), Gaps = 18/337 (5%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L D D+ T RSLNG RVADQILKLVPN E+F TTLRC+K WA RR +Y N+ G+LGGV
Sbjct: 169 SNLKDADDETQRSLNGPRVADQILKLVPNQENFRTTLRCIKLWATRRAIYGNIVGYLGGV 228
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN-PVMLCAIDEAELGFSVWDPRKNR 120
+A+L A++CQ+YPNA PS L+++FF VY W W PV+L I+E L F VW+P+ N
Sbjct: 229 AYAILTAKICQMYPNAAPSTLLTKFFTVYQQWNWGKVPVLLRPIEEGTLNFKVWNPKLNP 288
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
RDK H MPIITP+YPCMNS++NVS +TL+ M ++F+ G +I ++ E W LFE
Sbjct: 289 RDKQHLMPIITPSYPCMNSTFNVSKTTLKDMKNEFERGASITQKAENGLENWETLFEATD 348
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
FF Y NYLQV+I +N D L W G+++S++R L +E L H YP + +
Sbjct: 349 FFVRYSNYLQVEINTSNEVDHLKWIGFIQSKVRFLIPKLE--AVPGLTIHIYPDYFHNNQ 406
Query: 241 KPCAHCAFFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEIC----V 293
F++GL Q KPG EG ++ + EF+ + W E +
Sbjct: 407 GGAFSSYFYIGLEYKQTKPG----EGSVVNLASCIAEFE----ELLTWPDKNENMEKPKI 458
Query: 294 SHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNE 330
I+R IP +V + K+ + +Q+R +E +E
Sbjct: 459 QPIKRNAIPEFVISKKKKKELMKKNKAQKRKAEQDDE 495
>gi|427797219|gb|JAA64061.1| Putative polya polymerase, partial [Rhipicephalus pulchellus]
Length = 759
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/308 (44%), Positives = 190/308 (61%), Gaps = 5/308 (1%)
Query: 1 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
+++L ++D+ VRSLNGCRV D+IL LVPN E F LR +K WAKR GVYSNV G+LGG
Sbjct: 258 VNILKNLDQKCVRSLNGCRVTDEILHLVPNRETFRLALRAIKLWAKRHGVYSNVLGYLGG 317
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNR 120
V+WA+LVAR CQLYPNA + LV +FF V++ W WP PV+L +E+ LGF VWDPR N
Sbjct: 318 VSWAMLVARTCQLYPNAAAATLVHKFFLVFSQWPWPKPVLLKQPEESRLGFPVWDPRVNV 377
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
D+ H MPIITPAYP NS++NVS STL +M +F+ G I +E+ L ++ W LFEP
Sbjct: 378 ADRFHLMPIITPAYPQQNSTFNVSVSTLTIMRQEFKQGLAITDEIMLRRSDWMKLFEPPN 437
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
FF Y++++ + + + L W G VES++R L +ER Y + H P + S
Sbjct: 438 FFGKYKHFIVLMASTQSKEHHLEWYGLVESKIRILISNLERHPYIAI-AHVNPESF-PPS 495
Query: 241 KPCA---HCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIR 297
+P +F+GLQ E V +D R V+ K +K ME+ + ++R
Sbjct: 496 EPEGDKLQSMWFIGLQFNKTEHVNIDLTYDTRSFVDTVKRQATAINIFKQDMEVDIKYVR 555
Query: 298 RKQIPPYV 305
R+++ Y+
Sbjct: 556 RRELVRYL 563
>gi|403415037|emb|CCM01737.1| predicted protein [Fibroporia radiculosa]
Length = 626
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 156/424 (36%), Positives = 225/424 (53%), Gaps = 60/424 (14%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++DE VRSLNG RV D+IL+LVPNV F +LRC+K WA+RR +YSNV GFLGGV
Sbjct: 177 LLRNLDERCVRSLNGSRVTDEILRLVPNVTVFRDSLRCIKLWAQRRAIYSNVNGFLGGVA 236
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR+CQLYPNA+ +VSRFF + W WP PV+L I+E L VW+P+ D
Sbjct: 237 WAMLVARICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLPVRVWNPKLYPAD 296
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP M +++NV+ ST +M ++F+ G+ I ++V + A+WS LF + FF
Sbjct: 297 RAHRMPIITPAYPSMCATHNVTASTQMIMTEEFKKGSEIVDKVIVGTAEWSELFAKHDFF 356
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 242
+R YLQV N+D + W G VESR+RQL + +E ++ H ++ +
Sbjct: 357 HKHRYYLQVIASTGNSDLQIKWSGTVESRIRQLVMKLEY-----VESLILAHPFIKGFEQ 411
Query: 243 CAHC--------------------------------------AFFMGLQRKPGEVVQEG- 263
+HC F++GL +P G
Sbjct: 412 VSHCISSEEVRAVAQGEVSEAVSKRRKEDIEGKEGASTVYSTTFYIGLLIEPKLPGSSGP 471
Query: 264 QQFDIRGSVEEFKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ 322
++ DI EF + M+ + + M I V HI+ +P YV+ EG R PR A ++
Sbjct: 472 RKLDISYPTTEFTKLVKMWEKYDEAKMGIIVRHIKSTALPDYVYDEG---ERQPRSAQKR 528
Query: 323 RSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAP---SSVRSGT 379
S G++ G+ S D ++R S S + S P + P ++V S T
Sbjct: 529 VKSGKGSDKSNGT---------SPDMPNKKRRASNSLSESTSTMPLPMQPFKKAAVSSPT 579
Query: 380 GSNV 383
G+ V
Sbjct: 580 GAIV 583
>gi|403260636|ref|XP_003922768.1| PREDICTED: poly(A) polymerase gamma [Saimiri boliviensis
boliviensis]
Length = 736
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/320 (43%), Positives = 196/320 (61%), Gaps = 8/320 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGSKE 425
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTR 314
H+++KQ+ Y+ E ++ +
Sbjct: 486 HVKKKQLHHYLPAEILQKKK 505
>gi|312381415|gb|EFR27171.1| hypothetical protein AND_06288 [Anopheles darlingi]
Length = 1653
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 144/362 (39%), Positives = 207/362 (57%), Gaps = 55/362 (15%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRR-------------- 48
+L ++D+ +VRSLNGCRV D+IL+LVPN+++F LR +K WAKR+
Sbjct: 219 LLKNLDQKSVRSLNGCRVTDEILRLVPNIDNFRLALRTIKLWAKRKLLPHGLISPEGMCD 278
Query: 49 ------------------GVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVY 90
G+YSN G+ GGV+WA+LVAR CQLYPNAV + LV +FF V+
Sbjct: 279 ERCFNVRVAFCICLVTGHGIYSNSLGYFGGVSWAMLVARTCQLYPNAVAATLVHKFFLVF 338
Query: 91 TMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRV 150
+ W+WP PV+L D LGF VWDPR N +D+ H MPIITPAYP NS++NVS+ST +V
Sbjct: 339 SRWKWPQPVLLKQPDNVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQNSTFNVSSSTRKV 398
Query: 151 MMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVES 210
M+ +F G I +++ + K W LFE FF YR+++ + + ++NADD L W G VES
Sbjct: 399 MLMEFNRGMQITDDIMMGKQMWDKLFEAPSFFYRYRHFIVLLVTSSNADDHLEWCGLVES 458
Query: 211 RLRQLTLMIERDTYGKLQCHPYPHEY----------------VDTSK-PCAHCAF-FMGL 252
++R L +ER+ + L H P Y D ++ P A C+ F+GL
Sbjct: 459 KIRYLIQNLERNQHINL-AHVNPKCYEQHEQNPAATLNAGGGADANQTPAAFCSLWFIGL 517
Query: 253 QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKR 312
+ + E + D+ S++ F S++ + K GM+I H+RRKQ+ Y+ KR
Sbjct: 518 EFERTENL----NVDLTESIQSFTDSVHKHALLKDGMKIEARHVRRKQLASYLDANLLKR 573
Query: 313 TR 314
R
Sbjct: 574 ER 575
>gi|449280702|gb|EMC87938.1| Poly(A) polymerase alpha, partial [Columba livia]
Length = 736
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 202/335 (60%), Gaps = 19/335 (5%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 189 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 248
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 249 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 308
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 309 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 368
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 369 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPD-- 426
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 427 KEEYRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAARH 484
Query: 296 IRRKQ----IPPYVFPEGYKR-TRHPRLASQQRSS 325
++RKQ +P +V + K T RLA+ SS
Sbjct: 485 VKRKQLHQLLPSHVLQKKKKHSTEGIRLATLNDSS 519
>gi|194220708|ref|XP_001917579.1| PREDICTED: poly(A) polymerase gamma-like [Equus caballus]
Length = 741
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 139/320 (43%), Positives = 195/320 (60%), Gaps = 8/320 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTR 314
H+++KQ+ Y+ E ++ +
Sbjct: 486 HVKKKQLHHYLPAEILQKKK 505
>gi|355709247|gb|AES03528.1| poly polymerase gamma [Mustela putorius furo]
Length = 603
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 139/320 (43%), Positives = 195/320 (60%), Gaps = 8/320 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 51 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 110
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 111 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 170
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 171 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 230
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 231 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 289
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 290 HHKDNNYISMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 349
Query: 295 HIRRKQIPPYVFPEGYKRTR 314
H+++KQ+ Y+ E ++ +
Sbjct: 350 HVKKKQLHHYLPAEILQKKK 369
>gi|74210049|dbj|BAE21312.1| unnamed protein product [Mus musculus]
Length = 739
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 143/324 (44%), Positives = 197/324 (60%), Gaps = 21/324 (6%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDRE 431
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
+ + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 432 E--FRTMWVIGLVLKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMH 487
Query: 296 IRRKQ----IPPYVFPEGYKRTRH 315
++RKQ +P +V KR +H
Sbjct: 488 VKRKQLHQLLPSHVL---QKRNKH 508
>gi|395504561|ref|XP_003756616.1| PREDICTED: poly(A) polymerase alpha-like [Sarcophilus harrisii]
Length = 739
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 145/334 (43%), Positives = 201/334 (60%), Gaps = 18/334 (5%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 429
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 430 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMH 487
Query: 296 IRRKQ----IPPYVFPEGYKRTRHPRLASQQRSS 325
++R+Q +P +V + K + RL + SS
Sbjct: 488 VKRRQLHQLLPNHVLQKKKKHSSEVRLTALNDSS 521
>gi|351701193|gb|EHB04112.1| Poly(A) polymerase alpha, partial [Heterocephalus glaber]
Length = 736
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 134/302 (44%), Positives = 189/302 (62%), Gaps = 7/302 (2%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 190 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 249
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 250 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 309
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 310 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 369
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 370 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKE 429
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRK 299
+ + ++ E + +DI+ + ++ +IN MF + M+I H++RK
Sbjct: 430 EFRTMWVIGLVFKKTENENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRK 488
Query: 300 QI 301
Q+
Sbjct: 489 QL 490
>gi|301783573|ref|XP_002927202.1| PREDICTED: poly(A) polymerase gamma-like [Ailuropoda melanoleuca]
Length = 739
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 139/320 (43%), Positives = 195/320 (60%), Gaps = 8/320 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTR 314
H+++KQ+ Y+ E ++ +
Sbjct: 486 HVKKKQLHHYLPAEILQKKK 505
>gi|380815688|gb|AFE79718.1| poly(A) polymerase gamma [Macaca mulatta]
Length = 736
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 139/320 (43%), Positives = 195/320 (60%), Gaps = 8/320 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTR 314
H+++KQ+ Y+ E ++ +
Sbjct: 486 HVKKKQLHHYLPAEILQKKK 505
>gi|148675951|gb|EDL07898.1| poly(A) polymerase gamma, isoform CRA_a [Mus musculus]
Length = 650
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 145/333 (43%), Positives = 201/333 (60%), Gaps = 13/333 (3%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 244 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 303
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 304 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 363
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 364 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 423
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 424 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 482
Query: 242 PCAHCA------FFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEIC 292
H A +F+G+ + + E V +DI+ + N K GM+I
Sbjct: 483 --HHKANNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIE 540
Query: 293 VSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
+H+++KQ+ Y+ P + + L+ RSS
Sbjct: 541 ATHVKKKQLHHYL-PAEILQKKKKSLSDVSRSS 572
>gi|354482269|ref|XP_003503321.1| PREDICTED: poly(A) polymerase alpha [Cricetulus griseus]
Length = 742
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 144/324 (44%), Positives = 197/324 (60%), Gaps = 21/324 (6%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 195 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 254
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 255 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 314
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 315 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 374
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 375 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 432
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 433 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMH 490
Query: 296 IRRKQ----IPPYVFPEGYKRTRH 315
++RKQ +P +V KR +H
Sbjct: 491 VKRKQLHQLLPSHVL---QKRKKH 511
>gi|126290553|ref|XP_001375249.1| PREDICTED: poly(A) polymerase alpha-like [Monodelphis domestica]
Length = 738
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 145/334 (43%), Positives = 201/334 (60%), Gaps = 18/334 (5%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 429
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 430 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMH 487
Query: 296 IRRKQ----IPPYVFPEGYKRTRHPRLASQQRSS 325
++R+Q +P +V + K + RL + SS
Sbjct: 488 VKRRQLHQLLPNHVLQKKKKHSSEVRLTALNDSS 521
>gi|383413715|gb|AFH30071.1| poly(A) polymerase gamma [Macaca mulatta]
Length = 736
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 139/320 (43%), Positives = 195/320 (60%), Gaps = 8/320 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTR 314
H+++KQ+ Y+ E ++ +
Sbjct: 486 HVKKKQLHHYLPAEILQKKK 505
>gi|281354338|gb|EFB29922.1| hypothetical protein PANDA_016961 [Ailuropoda melanoleuca]
Length = 736
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 139/320 (43%), Positives = 195/320 (60%), Gaps = 8/320 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 184 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 243
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 244 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 303
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 304 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 363
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 364 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 422
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 423 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 482
Query: 295 HIRRKQIPPYVFPEGYKRTR 314
H+++KQ+ Y+ E ++ +
Sbjct: 483 HVKKKQLHHYLPAEILQKKK 502
>gi|355565713|gb|EHH22142.1| hypothetical protein EGK_05354, partial [Macaca mulatta]
gi|355751336|gb|EHH55591.1| hypothetical protein EGM_04830, partial [Macaca fascicularis]
Length = 733
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 139/320 (43%), Positives = 195/320 (60%), Gaps = 8/320 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 184 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 243
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 244 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 303
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 304 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 363
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 364 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 422
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 423 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 482
Query: 295 HIRRKQIPPYVFPEGYKRTR 314
H+++KQ+ Y+ E ++ +
Sbjct: 483 HVKKKQLHHYLPAEILQKKK 502
>gi|148686800|gb|EDL18747.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
gi|148686803|gb|EDL18750.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
Length = 736
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 143/324 (44%), Positives = 197/324 (60%), Gaps = 21/324 (6%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 189 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 248
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 249 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 308
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 309 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 368
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 369 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDRE 428
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
+ + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 429 E--FRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMH 484
Query: 296 IRRKQ----IPPYVFPEGYKRTRH 315
++RKQ +P +V KR +H
Sbjct: 485 VKRKQLHQLLPSHVL---QKRKKH 505
>gi|395329948|gb|EJF62333.1| polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 606
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 155/403 (38%), Positives = 215/403 (53%), Gaps = 44/403 (10%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++DE VRSLNG RV ++IL+LVPNV+ F LRC+K WA+RR +YSNV GFLGGV WA
Sbjct: 179 KNLDERCVRSLNGSRVINEILRLVPNVDVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWA 238
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
+LVAR+CQLYPNAV +VSRFF + W WP PV+L I++ L VW+PR +D+
Sbjct: 239 MLVARICQLYPNAVAGAIVSRFFIIMHRWSWPQPVLLKPIEDGPLQVRVWNPRLYPQDRN 298
Query: 125 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 184
H MPIITPAYP M +++NV ST ++M ++F+ G+ I ++V + QWSALF + FF
Sbjct: 299 HRMPIITPAYPSMCATHNVMASTQQIMTEEFKRGSEIVDQVISGEVQWSALFAKHDFFFR 358
Query: 185 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY-------- 236
YR YLQV + + D W G VES++RQL + +E KL HP+ +
Sbjct: 359 YRFYLQVIASSPDLDTQNKWSGTVESKIRQLVMRLEFVDTLKL-AHPFIKGFDTVYYCLS 417
Query: 237 VDTSKPCAHC--------------------------AFFMGLQRKPGEVVQEG-QQFDIR 269
D ++ A +FF+GL KP E G ++ DI
Sbjct: 418 EDETRAVARGEIPEAVANRKQEDIAGKEGATTMYTKSFFVGLSIKPKEAGATGPRKLDIS 477
Query: 270 GSVEEFKLSINMYMFWKP----GMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
EF I M W+ M I V HI+ +P +VF +G +R R + R++
Sbjct: 478 YPTNEF---IKMVRLWEKYDESQMNIVVRHIKHTALPDFVFDKG-EREAAARPKKRSRTA 533
Query: 326 ENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPD 368
+ P D + P KR +IS Q + +PD
Sbjct: 534 KESPAPSAKRSRMESDTPARPDSESPLKRSTISSQGRQLSTPD 576
>gi|21914853|ref|NP_035242.1| poly(A) polymerase alpha [Mus musculus]
gi|25090856|sp|Q61183.4|PAPOA_MOUSE RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase
gi|21623967|dbj|BAC00996.1| polyA polymerase [Mus musculus]
gi|162318632|gb|AAI56655.1| Poly (A) polymerase alpha [synthetic construct]
Length = 739
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 143/324 (44%), Positives = 197/324 (60%), Gaps = 21/324 (6%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDRE 431
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
+ + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 432 E--FRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMH 487
Query: 296 IRRKQ----IPPYVFPEGYKRTRH 315
++RKQ +P +V KR +H
Sbjct: 488 VKRKQLHQLLPSHVL---QKRKKH 508
>gi|109102989|ref|XP_001115228.1| PREDICTED: poly(A) polymerase gamma-like [Macaca mulatta]
Length = 736
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 139/320 (43%), Positives = 194/320 (60%), Gaps = 8/320 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTNEILQGKSNWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTR 314
H+++KQ+ Y+ E ++ +
Sbjct: 486 HVKKKQLHHYLPAEILQKKK 505
>gi|321469973|gb|EFX80951.1| hypothetical protein DAPPUDRAFT_318160 [Daphnia pulex]
Length = 630
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 135/314 (42%), Positives = 189/314 (60%), Gaps = 3/314 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D VRSLNGCRV D+IL+LVPN+++F LR +K WAK+ G+YSNV G+LGGV+
Sbjct: 194 LLKNLDPKCVRSLNGCRVTDEILRLVPNIDNFRLALRAIKLWAKKHGIYSNVLGYLGGVS 253
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQLYPNA + LV +FF V++ W WP PV+L D L + VWDPR N D
Sbjct: 254 WAMLVARTCQLYPNAAAATLVQKFFLVFSKWEWPQPVLLKPPDNVNLNYPVWDPRVNVSD 313
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS++NVS ST VM ++F+ G + EE+ KA W LFEP FF
Sbjct: 314 RYHLMPIITPAYPQQNSTFNVSCSTRAVMQEEFRQGFNMTEEIMTGKASWDKLFEPPNFF 373
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY--VDTS 240
Y++++ + +++ +D L W G VES++R L L +ER+ + L H P +Y V
Sbjct: 374 VKYKHFIVLIASSSSVEDQLEWVGLVESKIRHLILALERNDHITL-AHINPEQYDPVQPE 432
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 300
+F+GL K E + DI+ + + K G I H++RKQ
Sbjct: 433 PDTISTMWFIGLVFKKTESLNIDLTQDIQAFTGQVHRQASTAKTVKDGRRIDAKHVKRKQ 492
Query: 301 IPPYVFPEGYKRTR 314
+ Y+ RT+
Sbjct: 493 LSSYLPSTFLLRTK 506
>gi|148233493|ref|NP_001083620.1| poly(A) polymerase alpha-B [Xenopus laevis]
gi|38303906|gb|AAH61931.1| Pap protein [Xenopus laevis]
Length = 731
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 141/322 (43%), Positives = 196/322 (60%), Gaps = 18/322 (5%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN++ F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 189 NLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 248
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 249 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 308
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L KA+WS LF+ FF+ Y
Sbjct: 309 LMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLLKAEWSKLFDAPNFFQKY 368
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E ++
Sbjct: 369 KHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPSE--NSE 426
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 427 KEEFRTMWVIGLVFKKME-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ETEMKIAAMH 484
Query: 296 IRRKQ----IPPYVFPEGYKRT 313
++RKQ +P +V P+ K +
Sbjct: 485 VKRKQLHQLLPSHVLPKKKKHS 506
>gi|393215900|gb|EJD01391.1| poly polymerase [Fomitiporia mediterranea MF3/22]
Length = 629
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 152/384 (39%), Positives = 206/384 (53%), Gaps = 40/384 (10%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +RSLNG RV D+IL+LVPNV F LRC+K WA+RR +YSNV GFLGGV
Sbjct: 178 NLLKNLDERCIRSLNGSRVTDEILRLVPNVAVFRDALRCIKLWAQRRAIYSNVNGFLGGV 237
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV +VSRFF + W WP PV+L I+E L VW+PR
Sbjct: 238 AWAMLVARICQLYPNAVAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPRLYPG 297
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MPIITPAYP M +++NV+ ST +M ++F+ G I +++ QWSALF + F
Sbjct: 298 DRSHRMPIITPAYPAMCATHNVTESTQMIMTEEFKRGADIVDKIVFGSLQWSALFAKHDF 357
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F YR YLQ+ N D + W G VESR+RQL + +E L HP+ + D +
Sbjct: 358 FHKYRYYLQIIASTGNPDLQIKWAGTVESRIRQLVMKLEYVDALTL-AHPFIKGF-DQTL 415
Query: 242 PCAH------CA-----------------------------FFMGLQRKPGEVVQEG-QQ 265
C + CA FF+GL +P + G ++
Sbjct: 416 HCLNDEEVRLCASGEVPEAVLRRKKEEAEGKEGASTVHTTTFFIGLAIEPKQPGSTGPRR 475
Query: 266 FDIRGSVEEFKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRS 324
DI EF + M+ + + M I V HI+ +P YVF EG K R S R
Sbjct: 476 LDISYPTTEFTKLVKMWDKYDESSMGIVVRHIKNSSLPDYVFEEGAKPNLK-RAKSTNRG 534
Query: 325 SENGNEYQTGSGLKRKKDPESVDQ 348
N K++K E D+
Sbjct: 535 QGKSNNTTPDQPNKKQKKYEVFDK 558
>gi|28207949|emb|CAD62628.1| unnamed protein product [Homo sapiens]
Length = 752
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 219 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 278
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 279 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 338
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 339 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 398
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 399 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 456
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 457 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 514
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 515 VKRKQL 520
>gi|194379500|dbj|BAG63716.1| unnamed protein product [Homo sapiens]
Length = 761
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 208 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 267
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 268 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 327
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 328 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGPAITDEILLSKAEWSKLFEAPNFFQKY 387
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 388 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 445
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 446 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 503
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 504 VKRKQL 509
>gi|157820829|ref|NP_001101526.1| poly(A) polymerase alpha [Rattus norvegicus]
gi|149044213|gb|EDL97595.1| poly (A) polymerase alpha (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 739
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/324 (44%), Positives = 197/324 (60%), Gaps = 21/324 (6%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDRE 431
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
+ + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 432 E--FRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMH 487
Query: 296 IRRKQ----IPPYVFPEGYKRTRH 315
++RKQ +P +V KR +H
Sbjct: 488 VKRKQLHQLLPSHVL---QKRKKH 508
>gi|355693555|gb|EHH28158.1| hypothetical protein EGK_18525, partial [Macaca mulatta]
gi|355778841|gb|EHH63877.1| hypothetical protein EGM_16936, partial [Macaca fascicularis]
Length = 745
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 429
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 430 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 487
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 488 VKRKQL 493
>gi|32490557|ref|NP_116021.2| poly(A) polymerase alpha isoform 1 [Homo sapiens]
gi|332843097|ref|XP_003314562.1| PREDICTED: poly(A) polymerase alpha [Pan troglodytes]
gi|426377955|ref|XP_004055715.1| PREDICTED: poly(A) polymerase alpha [Gorilla gorilla gorilla]
gi|59803092|sp|P51003.4|PAPOA_HUMAN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|23271194|gb|AAH36014.1| Poly(A) polymerase alpha [Homo sapiens]
gi|119602048|gb|EAW81642.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
gi|119602050|gb|EAW81644.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
gi|306921445|dbj|BAJ17802.1| poly(A) polymerase alpha [synthetic construct]
gi|410307962|gb|JAA32581.1| poly(A) polymerase alpha [Pan troglodytes]
gi|410351881|gb|JAA42544.1| poly(A) polymerase alpha [Pan troglodytes]
gi|410351883|gb|JAA42545.1| poly(A) polymerase alpha [Pan troglodytes]
Length = 745
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 429
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 430 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 487
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 488 VKRKQL 493
>gi|388454164|ref|NP_001252826.1| poly(A) polymerase alpha [Macaca mulatta]
gi|380809034|gb|AFE76392.1| poly(A) polymerase alpha [Macaca mulatta]
gi|380809036|gb|AFE76393.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383411427|gb|AFH28927.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383411429|gb|AFH28928.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944936|gb|AFI36073.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944940|gb|AFI36075.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 745
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 429
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 430 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 487
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 488 VKRKQL 493
>gi|395827780|ref|XP_003787073.1| PREDICTED: poly(A) polymerase alpha [Otolemur garnettii]
Length = 740
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 429
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 430 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 487
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 488 VKRKQL 493
>gi|195151552|ref|XP_002016711.1| GL11728 [Drosophila persimilis]
gi|194110558|gb|EDW32601.1| GL11728 [Drosophila persimilis]
Length = 904
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/345 (41%), Positives = 199/345 (57%), Gaps = 37/345 (10%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D +VRSLNGCRV D+IL LVPN+E+F LR +K WAK+ G+YSN G+ GGV
Sbjct: 209 NLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 268
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR CQLYPNA + LV +FF V++ W+WPNPV+L D L F VWDPR N
Sbjct: 269 TWAMLVARTCQLYPNATAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNAS 328
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS++NVS ST +VM+ +F G I +E+ L +A W LFE F
Sbjct: 329 DRYHLMPIITPAYPQQNSTFNVSESTKKVMLTEFTRGMNITDEIMLGRASWERLFEAPSF 388
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QC------- 229
F YR+++ + + + ADD L W G VES++R L +ER+ + L +C
Sbjct: 389 FYRYRHFIVLLVNSQTADDHLEWCGLVESKIRLLIGNLERNPHIALAHVNPKCFELKKGE 448
Query: 230 ----------------HPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVE 273
P P++ TS P +F+GL+ + E + D+ S++
Sbjct: 449 SANNSQNNSGNEDDLKQPPPNQASVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQ 503
Query: 274 EFKLSINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 314
F + M+ K GM I H++RKQ+ Y+ + KR R
Sbjct: 504 NFTEHVIMHGVNIKMLKEGMAIDARHVKRKQLTVYLDADFLKRER 548
>gi|440899282|gb|ELR50609.1| Poly(A) polymerase alpha, partial [Bos grunniens mutus]
Length = 736
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 189 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 248
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 249 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 308
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 309 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 368
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 369 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 426
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 427 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 484
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 485 VKRKQL 490
>gi|390469486|ref|XP_002754311.2| PREDICTED: poly(A) polymerase alpha isoform 1 [Callithrix jacchus]
Length = 745
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 429
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 430 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 487
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 488 VKRKQL 493
>gi|380809032|gb|AFE76391.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383415357|gb|AFH30892.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944938|gb|AFI36074.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 724
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 429
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 430 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 487
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 488 VKRKQL 493
>gi|345804115|ref|XP_537551.3| PREDICTED: poly(A) polymerase alpha [Canis lupus familiaris]
Length = 832
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 285 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 344
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 345 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 404
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 405 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 464
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 465 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 522
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 523 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 580
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 581 VKRKQL 586
>gi|194379056|dbj|BAG58079.1| unnamed protein product [Homo sapiens]
Length = 740
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 208 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 267
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 268 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 327
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 328 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 387
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 388 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 445
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 446 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 503
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 504 VKRKQL 509
>gi|426248569|ref|XP_004018035.1| PREDICTED: poly(A) polymerase alpha [Ovis aries]
Length = 739
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 429
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 430 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 487
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 488 VKRKQL 493
>gi|3127182|gb|AAC16061.1| poly(A) polymerase II [Gallus gallus]
Length = 621
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/300 (46%), Positives = 187/300 (62%), Gaps = 14/300 (4%)
Query: 12 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 71
+RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+LVAR C
Sbjct: 80 IRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTC 139
Query: 72 QLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIIT 131
QLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIIT
Sbjct: 140 QLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIIT 199
Query: 132 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 191
PAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ +
Sbjct: 200 PAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVL 259
Query: 192 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHC 246
A L W G VES++R L +E++ + L Q P P E D K
Sbjct: 260 LASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPD--KEEYRT 317
Query: 247 AFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 301
+ +GL K E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 318 MWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAARHVKRKQL 375
>gi|410962897|ref|XP_003988005.1| PREDICTED: poly(A) polymerase alpha [Felis catus]
Length = 739
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 429
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 430 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 487
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 488 VKRKQL 493
>gi|345325876|ref|XP_001511509.2| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Ornithorhynchus anatinus]
Length = 740
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 252
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 253 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 312
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 372
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 373 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 430
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 431 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMH 488
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 489 VKRKQL 494
>gi|119602055|gb|EAW81649.1| poly(A) polymerase alpha, isoform CRA_f [Homo sapiens]
Length = 744
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 429
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 430 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 487
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 488 VKRKQL 493
>gi|28603760|ref|NP_788820.1| poly(A) polymerase alpha [Bos taurus]
gi|464345|sp|P25500.3|PAPOA_BOVIN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|605|emb|CAA43782.1| polynucleotide adenylyltransferase [Bos taurus]
gi|296475173|tpg|DAA17288.1| TPA: poly(A) polymerase alpha [Bos taurus]
Length = 739
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 429
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 430 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 487
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 488 VKRKQL 493
>gi|198459613|ref|XP_001361433.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
gi|198136742|gb|EAL26011.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
Length = 902
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/345 (41%), Positives = 199/345 (57%), Gaps = 37/345 (10%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D +VRSLNGCRV D+IL LVPN+E+F LR +K WAK+ G+YSN G+ GGV
Sbjct: 208 NLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 267
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR CQLYPNA + LV +FF V++ W+WPNPV+L D L F VWDPR N
Sbjct: 268 TWAMLVARTCQLYPNATAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNAS 327
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS++NVS ST +VM+ +F G I +E+ L +A W LFE F
Sbjct: 328 DRYHLMPIITPAYPQQNSTFNVSESTKKVMLTEFTRGMNITDEIMLGRASWERLFEAPSF 387
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QC------- 229
F YR+++ + + + ADD L W G VES++R L +ER+ + L +C
Sbjct: 388 FYRYRHFIVLLVNSQTADDHLEWCGLVESKIRLLIGNLERNPHIALAHVNPKCFELKKGE 447
Query: 230 ----------------HPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVE 273
P P++ TS P +F+GL+ + E + D+ S++
Sbjct: 448 SANNSQNNSGNEDDLKQPPPNQASVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQ 502
Query: 274 EFKLSINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 314
F + M+ K GM I H++RKQ+ Y+ + KR R
Sbjct: 503 NFTEHVIMHGVNIKMLKEGMAIDARHVKRKQLTVYLDADFLKRER 547
>gi|194038370|ref|XP_001929110.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Sus scrofa]
Length = 739
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 429
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 430 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 487
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 488 VKRKQL 493
>gi|348554483|ref|XP_003463055.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Cavia porcellus]
Length = 741
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/300 (46%), Positives = 187/300 (62%), Gaps = 14/300 (4%)
Query: 12 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 71
+RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+LVAR C
Sbjct: 200 IRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTC 259
Query: 72 QLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIIT 131
QLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIIT
Sbjct: 260 QLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIIT 319
Query: 132 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 191
PAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ +
Sbjct: 320 PAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVL 379
Query: 192 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHC 246
A L W G VES++R L +E++ + L Q P P E D K
Sbjct: 380 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFRT 437
Query: 247 AFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQI 301
+ +GL K E E D+ ++ F + +IN MF + M+I H++RKQ+
Sbjct: 438 MWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 495
>gi|336374059|gb|EGO02397.1| hypothetical protein SERLA73DRAFT_120990 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386978|gb|EGO28124.1| hypothetical protein SERLADRAFT_367679 [Serpula lacrymans var.
lacrymans S7.9]
Length = 558
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/364 (39%), Positives = 203/364 (55%), Gaps = 40/364 (10%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +RSL G RV D+IL+LVPNV F +LRC+K WA+RR +YSNV GFLGGV
Sbjct: 176 NLLRNLDERCIRSLGGSRVVDEILRLVPNVHVFRDSLRCIKLWAQRRAIYSNVNGFLGGV 235
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA+ +VSRFF + W WP PV+L I+E L VW+P+
Sbjct: 236 AWAMLVARICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPA 295
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MPIITPAYP M S++NV+ ST +M ++F+ G I ++V + A+WS LF + F
Sbjct: 296 DRSHRMPIITPAYPAMCSTHNVTASTQMIMTEEFKKGADIVDKVIVGTAEWSELFAKHDF 355
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY----- 236
F YR YLQV +AD + W G VESR+RQL + +E + HP+ +
Sbjct: 356 FHKYRYYLQVIASTGSADLQIKWSGTVESRIRQLVMKLEY-VDSLILAHPFIKGFEQIAY 414
Query: 237 -----------------------------VDTSKPCAHCAFFMGLQRKPGEVVQEG-QQF 266
V+ + F++GL +P + G ++
Sbjct: 415 CTSDEEVRAVAQGETSDAITRRKKEDIAGVEGATEVHTTTFYIGLAIEPKQPGAAGPRRL 474
Query: 267 DIRGSVEEFKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
DI EF + M+ + +P M I V HI+ +P YVF EG R PR A ++ +
Sbjct: 475 DISYPTTEFTKLVKMWEKYDEPTMGIVVRHIKSAALPDYVFDEG---ERQPRQALKRPKT 531
Query: 326 ENGN 329
G+
Sbjct: 532 AKGS 535
>gi|149737664|ref|XP_001489128.1| PREDICTED: poly(A) polymerase alpha-like [Equus caballus]
Length = 755
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 208 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 267
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 268 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 327
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 328 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 387
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 388 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 445
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 446 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 503
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 504 VKRKQL 509
>gi|148686802|gb|EDL18749.1| poly (A) polymerase alpha, isoform CRA_c [Mus musculus]
Length = 729
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/324 (44%), Positives = 197/324 (60%), Gaps = 21/324 (6%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 189 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 248
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 249 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 308
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 309 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 368
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 369 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDRE 428
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
+ + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 429 E--FRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMH 484
Query: 296 IRRKQ----IPPYVFPEGYKRTRH 315
++RKQ +P +V KR +H
Sbjct: 485 VKRKQLHQLLPSHVL---QKRKKH 505
>gi|281345200|gb|EFB20784.1| hypothetical protein PANDA_017098 [Ailuropoda melanoleuca]
Length = 736
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 189 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 248
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 249 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 308
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 309 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 368
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 369 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 426
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 427 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 484
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 485 VKRKQL 490
>gi|397526096|ref|XP_003832975.1| PREDICTED: poly(A) polymerase alpha, partial [Pan paniscus]
Length = 804
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 251 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 310
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 311 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 370
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 371 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 430
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 431 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKE 490
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
+ + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 491 E--FRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 546
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 547 VKRKQL 552
>gi|301783837|ref|XP_002927334.1| PREDICTED: poly(A) polymerase alpha-like [Ailuropoda melanoleuca]
Length = 739
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 429
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 430 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 487
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 488 VKRKQL 493
>gi|326921016|ref|XP_003206760.1| PREDICTED: poly(A) polymerase alpha-like [Meleagris gallopavo]
Length = 752
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 205 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 264
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 265 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 324
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 325 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 384
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 385 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPD-- 442
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 443 KEEYRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAARH 500
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 501 VKRKQL 506
>gi|73969700|ref|XP_852387.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Canis lupus
familiaris]
Length = 738
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/320 (43%), Positives = 195/320 (60%), Gaps = 8/320 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV ++IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTNEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTR 314
H+++KQ+ Y+ E ++ +
Sbjct: 486 HVKKKQLHHYLPAEILQKKK 505
>gi|426355375|ref|XP_004045099.1| PREDICTED: poly(A) polymerase beta [Gorilla gorilla gorilla]
Length = 637
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/305 (45%), Positives = 193/305 (63%), Gaps = 10/305 (3%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAK +YSN+ GFLGGV+WA
Sbjct: 192 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWA 251
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
+LVAR CQLYPNAV S LV +FF V++ W WPNPV+L +E L VWDPR N D+
Sbjct: 252 MLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRY 311
Query: 125 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 184
H MPIITPAYP NS+YNVS ST VM+++F+ G I E+ L+KA+WS LFE FF+
Sbjct: 312 HLMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQK 371
Query: 185 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDT 239
Y++Y+ + A+ L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 YKHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDM 431
Query: 240 SKPCAHCAFFMGLQRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHI 296
+ +GL +KP E++ +DI+ + ++ ++N MF + GM+I H+
Sbjct: 432 EEFRTMWVIGLGL-KKPENSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAMHL 489
Query: 297 RRKQI 301
RRK++
Sbjct: 490 RRKEL 494
>gi|18203318|sp|Q9NRJ5.1|PAPOB_HUMAN RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
Full=Polynucleotide adenylyltransferase beta; AltName:
Full=Testis-specific poly(A) polymerase
gi|8895537|gb|AAF81013.1|AF218840_1 testis-specific poly(A) polymerase [Homo sapiens]
gi|41474575|gb|AAS07561.1| unknown [Homo sapiens]
Length = 636
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/304 (45%), Positives = 193/304 (63%), Gaps = 10/304 (3%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNAV S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A+ L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDME 431
Query: 241 KPCAHCAFFMGLQRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIR 297
+ +GL +KP E++ +DI+ + ++ ++N MF + GM+I H+R
Sbjct: 432 EFRTMWVIGLGL-KKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAMHLR 489
Query: 298 RKQI 301
RK++
Sbjct: 490 RKEL 493
>gi|77874206|ref|NP_064529.4| poly(A) polymerase beta [Homo sapiens]
gi|51094718|gb|EAL23967.1| poly(A) polymerase beta (testis specific) [Homo sapiens]
Length = 637
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/304 (45%), Positives = 193/304 (63%), Gaps = 10/304 (3%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 252
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNAV S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 253 LVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 312
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I E+ L+KA+WS LFE FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKY 372
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A+ L W G VES++R L +E++ + L Q P P E D
Sbjct: 373 KHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDME 432
Query: 241 KPCAHCAFFMGLQRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIR 297
+ +GL +KP E++ +DI+ + ++ ++N MF + GM+I H+R
Sbjct: 433 EFRTMWVIGLGL-KKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAMHLR 490
Query: 298 RKQI 301
RK++
Sbjct: 491 RKEL 494
>gi|449504503|ref|XP_002200600.2| PREDICTED: poly(A) polymerase alpha [Taeniopygia guttata]
Length = 850
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 302 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 361
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 362 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 421
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 422 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 481
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 482 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPD-- 539
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 540 KEEYRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAARH 597
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 598 VKRKQL 603
>gi|123980646|gb|ABM82152.1| poly(A) polymerase beta (testis specific) [synthetic construct]
gi|123995471|gb|ABM85337.1| poly(A) polymerase beta (testis specific) [synthetic construct]
Length = 636
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/304 (45%), Positives = 193/304 (63%), Gaps = 10/304 (3%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNAV S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A+ L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDME 431
Query: 241 KPCAHCAFFMGLQRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIR 297
+ +GL +KP E++ +DI+ + ++ ++N MF + GM+I H+R
Sbjct: 432 EFRTMWVIGLGL-KKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAVHLR 489
Query: 298 RKQI 301
RK++
Sbjct: 490 RKEL 493
>gi|310750335|ref|NP_001185530.1| poly(A) polymerase alpha [Gallus gallus]
Length = 737
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 191 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 250
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 251 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 310
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 311 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 370
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 371 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPD-- 428
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 429 KEEYRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAARH 486
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 487 VKRKQL 492
>gi|74354794|gb|AAI02482.1| PAPOLA protein [Bos taurus]
Length = 693
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 429
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 430 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 487
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 488 VKRKQL 493
>gi|34193801|gb|AAH36653.2| Poly(A) polymerase beta (testis specific) [Homo sapiens]
Length = 637
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/304 (45%), Positives = 193/304 (63%), Gaps = 10/304 (3%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 252
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNAV S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 253 LVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 312
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I E+ L+KA+WS LFE FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKY 372
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A+ L W G VES++R L +E++ + L Q P P E D
Sbjct: 373 KHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDME 432
Query: 241 KPCAHCAFFMGLQRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIR 297
+ +GL +KP E++ +DI+ + ++ ++N MF + GM+I H+R
Sbjct: 433 EFRTMWVIGLGL-KKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAVHLR 490
Query: 298 RKQI 301
RK++
Sbjct: 491 RKEL 494
>gi|193573537|ref|XP_001946233.1| PREDICTED: poly(A) polymerase gamma-like [Acyrthosiphon pisum]
Length = 640
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 173/477 (36%), Positives = 262/477 (54%), Gaps = 44/477 (9%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +++ VRSLNGCRV D IL+LVPN E F TL +K WAKR VYSN G+LGGV+
Sbjct: 171 LLRNLNPKCVRSLNGCRVTDSILRLVPNRESFKKTLIAIKLWAKRHRVYSNALGYLGGVS 230
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYPNA P+ L+ +FF +++ W+WP PV+L +LG+ VWDPR N D
Sbjct: 231 WAMLVARVCQLYPNAAPATLIHKFFLIFSKWQWPQPVLLKPSYFMDLGYPVWDPRVNMAD 290
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITP YP NS++NVS STL ++ D+F+ I E+ ++ WS +F+P FF
Sbjct: 291 RNHVMPIITPVYPQQNSTFNVSHSTLAIIQDEFKTSLDIMGEILTGESSWSKIFQPSKFF 350
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQC----HPYPHEYV- 237
YR +L + + A ++LL W+G VESRLR L +E +++C H P ++V
Sbjct: 351 TKYRYFLAITVFANCDEELLEWRGLVESRLRFLPTSLE-----EIECVQRSHLNPDQFVL 405
Query: 238 --DTSKPCAHCAFFMGLQ--RKPGEVVQEGQQFDIRGSVEEFKLSIN--MYMFWKPGMEI 291
D S+ +F+GL+ + G VV D + +F L + + +K GM+I
Sbjct: 406 PYDKSQGRPSSVWFVGLEISKSNGTVV----NLDFSTHIRDFCLLVKSRAHTIFKAGMDI 461
Query: 292 CVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ---RSSENGNEYQTGSGLKRKKDPESVDQ 348
V+H++RK + YV E K P + R S G + + +K P S +
Sbjct: 462 QVNHLKRKDLRDYVPDELKKEKAIPNTVGSKIIARLSTEGRHSVSELVEESQKSPTS-RK 520
Query: 349 DGPEKRQSISPQKQDSLSPDHL----APSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVS 404
G E + K++ LS D + + S RS + N ++N ++ +
Sbjct: 521 RGIEDETDDNIIKKNLLSNDDIFVLGSVESHRSPSSEN-----KSNNLVNTLLSTAKE-- 573
Query: 405 NSSVITSVTSEVGSCEDVGNESVAGSSEGNNGSVEGS---NNPVSSQSDCCDADSQS 458
N S++T +E ++G ES+ ++ + ++E N+PVS++ CC AD +S
Sbjct: 574 NHSLLTE--NETKENINIGKESLL-LTDARHSTIESGDSLNSPVSNK--CC-ADDES 624
>gi|228152|prf||1717389A poly(A) polymerase
Length = 689
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 429
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 430 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 487
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 488 VKRKQL 493
>gi|384247369|gb|EIE20856.1| Poly(A) polymerase, partial [Coccomyxa subellipsoidea C-169]
Length = 504
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 192/340 (56%), Gaps = 38/340 (11%)
Query: 1 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
+S L + D+ +VRSLNGCRV D +L V ++E F T LR +K WA+RRG+YSNV G+LGG
Sbjct: 169 ISTLRNADDKSVRSLNGCRVTDTLLNQVESIETFRTALRVIKLWAERRGIYSNVVGYLGG 228
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNR 120
VNWA+LVA C+LYP + S++V RFF+V+ W WP P+ML I+ +G VWDPR N
Sbjct: 229 VNWAILVAYTCKLYPCGIASVIVDRFFKVFARWPWPTPIMLREIEHDAMGLQVWDPRINP 288
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVM------------MDQFQYGNTICEEV--E 166
RD H MPIITPAYP NSSYNVS STL M ++F++G +C + E
Sbjct: 289 RDSMHLMPIITPAYPAANSSYNVSESTLAAMKARTQLHQTCLLQEEFEHGEKVCTRILAE 348
Query: 167 LNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLL-------------AWKGWVESRLR 213
+W L EP FF +YRNYLQ + + + AW GWV SRLR
Sbjct: 349 GGLTKWHKLLEPVPFFRNYRNYLQARLFLTPSQFIPFATCCFMHCILQEAWDGWVHSRLR 408
Query: 214 QLTLMIERDTYGKLQCHPYPHEYVDTSKPCA-----HCAFFMGLQRKPGEVVQEGQ--QF 266
QL + +E + P+P P A C +FMGL++KP G+
Sbjct: 409 QLVMRVE----PFVTVRPWPKAIFPPRGPEAAGQPRRCFYFMGLKKKPLPSQPGGRASSV 464
Query: 267 DIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVF 306
++ V+EFK + Y+ WK GM + ++H +K +P +V
Sbjct: 465 NLNNPVQEFKNQVMGYLSWKEGMHVLITHQMQKALPSFVL 504
>gi|55727879|emb|CAH90692.1| hypothetical protein [Pongo abelii]
gi|83405193|gb|AAI10907.1| PAPOLG protein [Homo sapiens]
Length = 506
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 139/320 (43%), Positives = 195/320 (60%), Gaps = 8/320 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAH----CAFFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYVFPEGYKRTR 314
H+++KQ+ Y+ E ++ +
Sbjct: 486 HVKKKQLHHYLPAEILQKKK 505
>gi|58865618|ref|NP_001012020.1| poly(A) polymerase beta [Rattus norvegicus]
gi|50927350|gb|AAH79046.1| Poly (A) polymerase beta (testis specific) [Rattus norvegicus]
gi|149034991|gb|EDL89711.1| poly (A) polymerase beta (testis specific) [Rattus norvegicus]
Length = 642
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 140/305 (45%), Positives = 192/305 (62%), Gaps = 12/305 (3%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN++ F TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 252
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 253 LVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 312
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I E+ LNKA+WS LFE FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKY 372
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E VD
Sbjct: 373 KHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENVD-- 430
Query: 241 KPCAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHI 296
K + +GL +KP E++ +DI+ + ++ +IN MF + M+I H+
Sbjct: 431 KEEFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHL 489
Query: 297 RRKQI 301
RRK++
Sbjct: 490 RRKEL 494
>gi|643|emb|CAA45031.1| poly(A) polymerase [Bos taurus]
Length = 689
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 429
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 430 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 487
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 488 VKRKQL 493
>gi|307107277|gb|EFN55520.1| hypothetical protein CHLNCDRAFT_23208 [Chlorella variabilis]
Length = 632
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/320 (44%), Positives = 198/320 (61%), Gaps = 24/320 (7%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L D+ +VRSLNGCRV D IL+ VP+V HF T LRCLK WA+RRGVYSNVTG+LGGVNW
Sbjct: 177 LRHCDDQSVRSLNGCRVTDMILREVPSVPHFRTALRCLKLWAERRGVYSNVTGYLGGVNW 236
Query: 64 ALLVARVCQLYP---------NAVPSMLVSRFFRVYTMWRWPNPVMLCAID-EAELGFSV 113
A+LVA VC+L P P + V +VY+ W WP P+ML AI+ + L V
Sbjct: 237 AILVAYVCKLQPCLLASPPHLGPAPCLPVP---QVYSQWAWPTPIMLRAIERDPSLAMPV 293
Query: 114 WDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKA--- 170
WDPR+N RD+TH MPIITPAYPCMNSSYNVS TL VM ++F+ G+ +C + +
Sbjct: 294 WDPRENPRDRTHLMPIITPAYPCMNSSYNVSECTLAVMAEEFRRGDEVCGRIMTHNGSGL 353
Query: 171 -QWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQC 229
W+ L EP FFE ++++LQV+++A++ +D W+GWV SR+R L + ++ + Q
Sbjct: 354 TDWAQLLEPLPFFEGFKHFLQVEVMASSQEDFEVWEGWVHSRMRLLIKVDQQQQQQQQQQ 413
Query: 230 HPYPHEYVDTSKPCAH----CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFW 285
V + P A C +FMGL +K ++ + + D+ V EF + +
Sbjct: 414 DGGGGGSV--ADPPAQQQPRCFYFMGLSKKKAMIIPQS-KVDLTQPVNEFAHKVKEFEQR 470
Query: 286 KPGMEICVSHIRRKQIPPYV 305
+ GM+I V H+ ++Q+P +V
Sbjct: 471 REGMDISVRHLLQRQLPEWV 490
>gi|417412482|gb|JAA52623.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 725
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 143/325 (44%), Positives = 196/325 (60%), Gaps = 21/325 (6%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA
Sbjct: 204 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWA 263
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+
Sbjct: 264 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 323
Query: 125 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 184
H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+K +WS LFE FF+
Sbjct: 324 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQK 383
Query: 185 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDT 239
Y++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 384 YKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPD- 442
Query: 240 SKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVS 294
K + +GL K E E D+ ++ F + +IN MF + M+I
Sbjct: 443 -KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAM 499
Query: 295 HIRRKQ----IPPYVFPEGYKRTRH 315
H++RKQ +P +V KR +H
Sbjct: 500 HVKRKQLHELLPNHVL---QKRKKH 521
>gi|297679796|ref|XP_002817705.1| PREDICTED: poly(A) polymerase beta [Pongo abelii]
Length = 637
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/304 (44%), Positives = 193/304 (63%), Gaps = 8/304 (2%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAK +YSN+ GFLGGV+WA
Sbjct: 192 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWA 251
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
+LVAR CQLYPNAV S LV +FF V++ W WPNPV+L +E L VWDPR N D+
Sbjct: 252 MLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRY 311
Query: 125 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 184
H MPIITPAYP NS+YNVS ST VM+++F+ G I E+ L+KA+WS LFE FF+
Sbjct: 312 HLMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQK 371
Query: 185 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDT 239
Y++Y+ + A+ L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 YKHYIILLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDK 431
Query: 240 SKPCAHCAFFMGLQR-KPGEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIR 297
+ +GL++ + E++ +DI+ + ++ ++N MF + GM+I H+R
Sbjct: 432 EEFRTMWVIGLGLKKPENSEILSIDLTYDIQSFTDTVYRQAMNSKMF-EMGMKITAMHLR 490
Query: 298 RKQI 301
RK++
Sbjct: 491 RKEL 494
>gi|417412515|gb|JAA52639.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 738
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 143/324 (44%), Positives = 196/324 (60%), Gaps = 21/324 (6%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 205 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 264
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 265 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 324
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+K +WS LFE FF+ Y
Sbjct: 325 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKY 384
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 385 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPD-- 442
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 443 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 500
Query: 296 IRRKQ----IPPYVFPEGYKRTRH 315
++RKQ +P +V KR +H
Sbjct: 501 VKRKQLHELLPNHVL---QKRKKH 521
>gi|327259110|ref|XP_003214381.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Anolis carolinensis]
Length = 771
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 138/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 223 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 282
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 283 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 342
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 343 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 402
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 403 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 460
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 461 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMH 518
Query: 296 IRRKQI 301
++R+Q+
Sbjct: 519 VKRRQL 524
>gi|296192583|ref|XP_002744135.1| PREDICTED: poly(A) polymerase beta [Callithrix jacchus]
Length = 634
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 136/299 (45%), Positives = 191/299 (63%), Gaps = 10/299 (3%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
++RSLNGCRV D+IL LVPN+++F TLR +K WAK +YSN+ GFLGGV+WA+LVAR
Sbjct: 195 SIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHSIYSNILGFLGGVSWAMLVART 254
Query: 71 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 130
CQLYPNAV S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPII
Sbjct: 255 CQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEEQNLNLPVWDPRVNPSDRYHLMPII 314
Query: 131 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 190
TPAYP NS+YNVS ST VM+++F+ G I E+ LNKA+WS LFE FF+ Y++Y+
Sbjct: 315 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIV 374
Query: 191 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV----DTSKPCAHC 246
+ A L W G VES++R L +E++ + L H P ++ + K
Sbjct: 375 LLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFLAPKENPGKKEFRT 433
Query: 247 AFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 301
+ +GL +KP E++ +DI+ + ++ ++N MF + GM+I H+RRK++
Sbjct: 434 MWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAVNSKMF-ETGMKIAAMHLRRKEL 491
>gi|10433147|dbj|BAB13919.1| unnamed protein product [Homo sapiens]
Length = 501
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 138/311 (44%), Positives = 191/311 (61%), Gaps = 8/311 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAH----CAFFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYV 305
H+++KQ+ Y+
Sbjct: 486 HVKKKQLHHYL 496
>gi|119620434|gb|EAX00029.1| poly(A) polymerase gamma, isoform CRA_a [Homo sapiens]
Length = 508
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 138/311 (44%), Positives = 191/311 (61%), Gaps = 8/311 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAH----CAFFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HIRRKQIPPYV 305
H+++KQ+ Y+
Sbjct: 486 HVKKKQLHHYL 496
>gi|432104377|gb|ELK31030.1| Poly(A) polymerase alpha [Myotis davidii]
Length = 844
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 138/306 (45%), Positives = 189/306 (61%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 290 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 349
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 350 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 409
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+K +WS LFE FF+ Y
Sbjct: 410 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKY 469
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 470 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 527
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 528 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 585
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 586 VKRKQL 591
>gi|431839265|gb|ELK01192.1| Poly(A) polymerase alpha, partial [Pteropus alecto]
Length = 746
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 138/306 (45%), Positives = 189/306 (61%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 199 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 258
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 259 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 318
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+K +WS LFE FF+ Y
Sbjct: 319 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKY 378
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 379 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 436
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 437 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 494
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 495 VKRKQL 500
>gi|18203580|sp|Q9WVP6.2|PAPOB_MOUSE RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
Full=Polynucleotide adenylyltransferase beta; AltName:
Full=Testis-specific poly(A) polymerase
Length = 641
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 139/305 (45%), Positives = 191/305 (62%), Gaps = 12/305 (3%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN++ F TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I E+ LNKA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETAD-- 429
Query: 241 KPCAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHI 296
K + +GL +KP E++ +DI+ + ++ +IN MF + M+I H+
Sbjct: 430 KEEFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHL 488
Query: 297 RRKQI 301
RRK++
Sbjct: 489 RRKEL 493
>gi|9910588|ref|NP_064327.1| poly(A) polymerase beta [Mus musculus]
gi|5701744|dbj|BAA83086.1| testis-specific poly(A) polymerase [Mus musculus]
gi|120538333|gb|AAI29898.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
gi|120538567|gb|AAI29897.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
gi|148687152|gb|EDL19099.1| poly (A) polymerase beta (testis specific) [Mus musculus]
Length = 642
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 139/305 (45%), Positives = 191/305 (62%), Gaps = 12/305 (3%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN++ F TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 252
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 253 LVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 312
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I E+ LNKA+WS LFE FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKY 372
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 373 KHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETAD-- 430
Query: 241 KPCAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHI 296
K + +GL +KP E++ +DI+ + ++ +IN MF + M+I H+
Sbjct: 431 KEEFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHL 489
Query: 297 RRKQI 301
RRK++
Sbjct: 490 RRKEL 494
>gi|417412397|gb|JAA52587.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 707
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 143/324 (44%), Positives = 196/324 (60%), Gaps = 21/324 (6%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 205 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 264
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 265 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 324
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+K +WS LFE FF+ Y
Sbjct: 325 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKY 384
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 385 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPD-- 442
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 443 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 500
Query: 296 IRRKQ----IPPYVFPEGYKRTRH 315
++RKQ +P +V KR +H
Sbjct: 501 VKRKQLHELLPNHVL---QKRKKH 521
>gi|1709571|sp|P51004.1|PAPO1_XENLA RecName: Full=Poly(A) polymerase alpha-A; Short=PAP-alpha-A;
AltName: Full=Polynucleotide adenylyltransferase alpha-A
gi|643644|gb|AAC59745.1| poly(A) polymerase type 1, partial [Xenopus laevis]
Length = 715
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 140/322 (43%), Positives = 196/322 (60%), Gaps = 18/322 (5%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN++ F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 174 NLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 233
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 234 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 293
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L KA+WS LF+ FF+ Y
Sbjct: 294 LMPIITPAYPQQNSTYNVSVSTRAVMIEEFKQGLAITDEILLGKAEWSKLFDAPNFFQKY 353
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L + P P E ++
Sbjct: 354 KHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPRSFPAPSENME-- 411
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 412 KEEFRTMWVIGLVFKKME-NSENLSVDLTYDIQSFTDTVDRQAINSKMF-ETEMKIAAMH 469
Query: 296 IRRKQI----PPYVFPEGYKRT 313
++RKQ+ P +V P+ K +
Sbjct: 470 VKRKQLHQLQPSHVSPKKKKHS 491
>gi|392568430|gb|EIW61604.1| poly-A polymerase [Trametes versicolor FP-101664 SS1]
Length = 652
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 148/372 (39%), Positives = 202/372 (54%), Gaps = 44/372 (11%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE VRSLNG RV D+IL+LVPNV F LRC+K WA+RR +YSNV GFLGGV
Sbjct: 185 NLLRNLDERCVRSLNGSRVTDEILRLVPNVTVFRNALRCIKLWAQRRAIYSNVNGFLGGV 244
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA+ +VSRFF + W WP PVML I++ L VW+P+
Sbjct: 245 AWAMLVARICQLYPNAIAGAIVSRFFIIMYQWTWPQPVMLKPIEDGPLPVRVWNPKLYPA 304
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP M +++NV+ ST +M ++F+ + I + + + KA WS LF + F
Sbjct: 305 DRAHRMPIITPAYPSMCATHNVTQSTQMIMTEEFKKASDIVDNIIVGKASWSDLFAKHDF 364
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH------- 234
F YR YLQV D + W G VESR+RQL + +E L HP+
Sbjct: 365 FHKYRYYLQVIASTGGPDVQIKWSGTVESRIRQLVMKLEYVESLAL-AHPFIKGFEQVSY 423
Query: 235 ---------------------------EYVDTSKPCAHCAFFMGL---QRKPGEVVQEGQ 264
E V+ F++GL R+PG V +
Sbjct: 424 CLTDEEVRAVAQGEISEAIAKRKKEDIEGVEGGSAVYSTTFYIGLVVEPRQPGSV--GPR 481
Query: 265 QFDIRGSVEEFKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQR 323
+ DI EF + M+ F + M I V HIR +P YVF EG R PRLA ++
Sbjct: 482 RLDISYPTTEFTKLVKMWEKFDENKMGIVVRHIRSAILPDYVFDEG---ERQPRLAQKRP 538
Query: 324 SSENGNEYQTGS 335
+++ + + S
Sbjct: 539 NTKTTDRFNNTS 550
>gi|417412403|gb|JAA52590.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 709
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 143/325 (44%), Positives = 196/325 (60%), Gaps = 21/325 (6%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA
Sbjct: 204 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWA 263
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+
Sbjct: 264 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 323
Query: 125 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 184
H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+K +WS LFE FF+
Sbjct: 324 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQK 383
Query: 185 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDT 239
Y++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 384 YKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPD- 442
Query: 240 SKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVS 294
K + +GL K E E D+ ++ F + +IN MF + M+I
Sbjct: 443 -KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAM 499
Query: 295 HIRRKQ----IPPYVFPEGYKRTRH 315
H++RKQ +P +V KR +H
Sbjct: 500 HVKRKQLHELLPNHVL---QKRKKH 521
>gi|403287191|ref|XP_003934837.1| PREDICTED: poly(A) polymerase beta [Saimiri boliviensis
boliviensis]
Length = 634
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 193/306 (63%), Gaps = 12/306 (3%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAK +YSN+ GFLGGV+WA
Sbjct: 189 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWA 248
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
+LVAR CQLYPNAV S LV +FF V++ W WPNPV+L +E L VWDPR N D+
Sbjct: 249 MLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRY 308
Query: 125 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 184
H MPIITPAYP NS+YNVS ST VM+++F+ G I E+ L+KA+WS LFE FF+
Sbjct: 309 HLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQK 368
Query: 185 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDT 239
Y++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 369 YKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD- 427
Query: 240 SKPCAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSH 295
K + +GL +KP E++ +DI+ + ++ ++N MF + GM+I H
Sbjct: 428 -KEEFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAMNSKMF-ETGMKIAAMH 485
Query: 296 IRRKQI 301
+RRK++
Sbjct: 486 LRRKEL 491
>gi|344274222|ref|XP_003408916.1| PREDICTED: poly(A) polymerase alpha-like [Loxodonta africana]
Length = 739
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 137/306 (44%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P + D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKDNPD-- 429
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 430 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 487
Query: 296 IRRKQI 301
++R+Q+
Sbjct: 488 VKRRQL 493
>gi|332226879|ref|XP_003262619.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma [Nomascus
leucogenys]
Length = 735
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 199/335 (59%), Gaps = 12/335 (3%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----------QCH 230
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L + H
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 231 PYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 290
+ YV P + + + + Q + + ++ + N+ M K GM+
Sbjct: 427 HKDNNYVSMWFPWDNFSESRKXENAESVNIXXXQSYIQSFTDTVYRQANNINML-KEGMK 485
Query: 291 ICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
I +H+++KQ+ Y+ E ++ + L+ RSS
Sbjct: 486 IEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSS 520
>gi|242024112|ref|XP_002432474.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
gi|212517907|gb|EEB19736.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
Length = 625
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 140/361 (38%), Positives = 206/361 (57%), Gaps = 15/361 (4%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D+ VRSLNGCRV D+IL+LVPN E+F LR +K WAK+ VYSN G+LGGV+
Sbjct: 200 LLKNLDQKCVRSLNGCRVTDEILRLVPNKENFRLALRVIKLWAKKHRVYSNALGYLGGVS 259
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQLYPNAV + LV +FF V++ W+WP PV+L D L F VWDPR N D
Sbjct: 260 WAMLVARTCQLYPNAVAATLVHKFFLVFSKWKWPQPVLLKQPDTLNLNFPVWDPRVNVSD 319
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS++NVS ST +M D+ + G +I E++ L K W LFE FF
Sbjct: 320 RYHLMPIITPAYPQQNSTFNVSLSTRSIMQDELKLGLSITEDIMLGKCGWEKLFETSHFF 379
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 242
YR+Y+ + + + + +D L W G VES++R L +ER+ + L H P + +P
Sbjct: 380 SKYRHYIVLLLSSNSPEDQLEWCGLVESKIRLLVGNLERNHHINL-AHVNPDSFQQPQEP 438
Query: 243 CAHC---AFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRK 299
++ +F+G+ + +DI + WK GM++ +++RK
Sbjct: 439 DSNVLCTMWFIGVVFAKTGNLNVDLTYDIMSFTDTVVRQARASNIWKEGMKVVAKYVKRK 498
Query: 300 QIPPYVFPEGYKRTRH----------PRLASQQRSSENGNEYQTGSGLKRKKDPESVDQD 349
++ Y+ P K+ + + Q ++ +T SG KK P +VD++
Sbjct: 499 ELTSYLSPSVLKKEKRLNTTPNASPGSKNGGVQEKNKKRKMAETTSGPMAKK-PRAVDEN 557
Query: 350 G 350
Sbjct: 558 A 558
>gi|371470953|gb|AEX30810.1| poly(A) polymerase [Bubalus bubalis]
Length = 739
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 139/310 (44%), Positives = 191/310 (61%), Gaps = 14/310 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFQAPKENPD-- 429
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 430 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 487
Query: 296 IRRKQIPPYV 305
++RKQ+ P +
Sbjct: 488 VKRKQLHPLL 497
>gi|67972178|dbj|BAE02431.1| unnamed protein product [Macaca fascicularis]
Length = 637
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/342 (41%), Positives = 207/342 (60%), Gaps = 14/342 (4%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAK +YSN+ GFLGGV+WA
Sbjct: 192 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWA 251
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
+LVAR CQLYPNAV S LV +FF V++ W WPNPV+L +E L VWDPR N D+
Sbjct: 252 MLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRY 311
Query: 125 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 184
H MPIITPAYP NS+YNVS ST VM+++F+ G I E+ L+KA+WS LFE FF+
Sbjct: 312 HLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQK 371
Query: 185 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDT 239
Y++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 YKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDM 431
Query: 240 SKPCAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSH 295
+ + +GL +KP E++ +DI+ + ++ ++N MF + GM+I H
Sbjct: 432 EE--FRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAMNSKMF-EMGMKITAMH 488
Query: 296 IRRKQIPPYVFPEGYKRTRHPRLASQQRSSE-NGNEYQTGSG 336
+RRK++ + P + + + +R ++ N N + +G
Sbjct: 489 LRRKEL-HQLLPHHVLQDKKAQATESRRLTDLNDNSFDLSAG 529
>gi|66357032|ref|XP_625694.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
Iowa II]
gi|46226666|gb|EAK87645.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
Iowa II]
Length = 699
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/333 (39%), Positives = 195/333 (58%), Gaps = 40/333 (12%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
+VD+ T RSLNGCRV D IL+LVPN E F T LR +K W+K RG+YSNV G+LGG++WA+
Sbjct: 192 NVDDKTARSLNGCRVNDMILQLVPNKESFRTALRFVKHWSKARGIYSNVLGYLGGISWAI 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE------LGFSVWDPRKN 119
L AR+CQLYPNA PS +++RFF +Y W+W NPV+LC I E +GF VW+P N
Sbjct: 252 LTARICQLYPNAAPSQIINRFFYIYKTWQWKNPVILCEIKEVPKNTPGLMGFRVWNPNLN 311
Query: 120 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 179
+D+ H MPIITPA+P MNS++NV+ +TL V+ D+ Q I +++E +KA W ++ P+
Sbjct: 312 PQDRAHVMPIITPAFPSMNSTHNVTHTTLGVITDELQRAYRIIQDIENDKATWHDVWSPF 371
Query: 180 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 239
LFFE +++++QV +++ N W GW+ES+LR L +E T+ LQ P+P +
Sbjct: 372 LFFEKHKHFIQVKMLSNNEQAFHKWIGWIESKLRFLVRKLE--TFKGLQVRPWPKAIQEQ 429
Query: 240 SKPCAHCAFFMGLQRKPGEVVQEGQQ---------------------FDIRGSVEEFKLS 278
+ A F G V+ D+RG++ +F
Sbjct: 430 DE--AKDGFIFAQSMYIGLVLNNSNSNNGSSSTGVTGVSNSSGTAPVVDLRGAILDF--- 484
Query: 279 INMYMFW------KPGMEICVSHIRRKQIPPYV 305
+ M W K +++ V H+R K +P ++
Sbjct: 485 VGFIMNWSEVENYKDSIDLKVRHLRAKDLPKHL 517
>gi|392587022|gb|EIW76357.1| Poly(A) polymerase [Coniophora puteana RWD-64-598 SS2]
Length = 629
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/379 (37%), Positives = 210/379 (55%), Gaps = 37/379 (9%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +RSL G RV D+IL+LVPNVE + +LRC+K WA+RR +YSNV GFLGGV
Sbjct: 176 NLLRNLDERCIRSLGGSRVNDEILRLVPNVEVYRDSLRCIKLWAQRRAIYSNVNGFLGGV 235
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV +VSRFF + W WP PV+L I+E L VW+P+
Sbjct: 236 AWAILVARICQLYPNAVAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPG 295
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MPIITPAYP M S++NV+ ST ++ ++F+ G I ++V + A W+ LF + F
Sbjct: 296 DRSHRMPIITPAYPAMCSTHNVTQSTQMIVTEEFKKGADIVDKVIVGSATWADLFRKHDF 355
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE--------------------- 220
F YR YLQV N + + W G VESRLRQL + +E
Sbjct: 356 FHKYRYYLQVIASTDNTETQIKWAGTVESRLRQLVMKLEYVDSLILAHPFIKGFDQVCHC 415
Query: 221 --RDTYGKLQCHPYPH----------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFD 267
D + C P + V+ ++ AF++GL+ +P G ++ D
Sbjct: 416 STEDEIRSVACGEIPEAVRKRKAEDIKNVEGAQTVYSTAFYIGLEIEPKPAGATGPRKLD 475
Query: 268 IRGSVEEFKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSE 326
I EF + M+ + + M I V H++ +P YVF EG ++ R R + + +
Sbjct: 476 ISYPTTEFTKLVKMWEKYNETTMGIYVRHMKSTSLPDYVFDEGERQPRQNRKRPKNNAGK 535
Query: 327 NGNEYQTGSGLKRKKDPES 345
+ N + G ++ PES
Sbjct: 536 SSN--ASPDGPNKRPRPES 552
>gi|5456696|gb|AAD43624.1|AF039957_1 testis-specific poly(A) polymerase [Mus musculus]
Length = 641
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/305 (45%), Positives = 190/305 (62%), Gaps = 12/305 (3%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RS NGCRV D+IL LVPN++ F TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSFNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I E+ LNKA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETAD-- 429
Query: 241 KPCAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHI 296
K + +GL +KP E++ +DI+ + ++ +IN MF + M+I H+
Sbjct: 430 KEEFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHL 488
Query: 297 RRKQI 301
RRK++
Sbjct: 489 RRKEL 493
>gi|395329949|gb|EJF62334.1| polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 628
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/364 (39%), Positives = 202/364 (55%), Gaps = 40/364 (10%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D+ VRSLNG RV D+IL+LVPNV F +LRC+K WA+RR +YSNV GFLGGV
Sbjct: 181 NLLRNLDDRCVRSLNGSRVTDEILRLVPNVSVFRDSLRCIKLWAQRRAIYSNVNGFLGGV 240
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV +VSRFF + W WP PV+L I++ L VW+P+
Sbjct: 241 AWAMLVARICQLYPNAVAGAIVSRFFIIMYQWAWPQPVLLKQIEDGPLPVRVWNPKSYPA 300
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP M +++NV+ ST +M ++F+ + I ++V +NKA WS LF + F
Sbjct: 301 DRAHRMPIITPAYPSMCATHNVTQSTQMIMTEEFKKASEIVDKVIINKASWSDLFARHDF 360
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH------- 234
F YR YLQV + + + W G VESR+RQL + +E L HP+
Sbjct: 361 FHKYRYYLQVIASTGSPELQVKWSGTVESRVRQLVMKLEYVESLAL-AHPFIKGFEQVSY 419
Query: 235 ---------------------------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQF 266
E ++ + F++GL +P + G ++
Sbjct: 420 CINDEEVRSVAQGEVSEAVARRKKEDIEGIEGASAVYSTTFYIGLAVEPKQPGAVGPRRL 479
Query: 267 DIRGSVEEFKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
DI EF + M+ F + M I V HI+ +P YVF +G R PRLA ++
Sbjct: 480 DISYPTTEFTKLVKMWEKFDEQKMGIVVRHIKSSALPEYVFDDG---ERQPRLAQKRPKK 536
Query: 326 ENGN 329
E +
Sbjct: 537 ETTD 540
>gi|55669561|pdb|1Q79|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
Length = 514
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRXIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 429
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 430 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 487
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 488 VKRKQL 493
>gi|302564155|ref|NP_001181787.1| poly(A) polymerase beta [Macaca mulatta]
Length = 637
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/306 (45%), Positives = 193/306 (63%), Gaps = 12/306 (3%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAK +YSN+ GFLGGV+WA
Sbjct: 192 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWA 251
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
+LVAR CQLYPNAV S LV +FF V++ W WPNPV+L +E L VWDPR N D+
Sbjct: 252 MLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRY 311
Query: 125 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 184
H MPIITPAYP NS+YNVS ST VM+++F+ G I E+ L+KA+WS LFE FF+
Sbjct: 312 HLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQK 371
Query: 185 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDT 239
Y++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 YKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDM 431
Query: 240 SKPCAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSH 295
+ + +GL +KP E++ +DI+ + ++ ++N MF + GM+I H
Sbjct: 432 EE--FRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAMNSKMF-EMGMKITAMH 488
Query: 296 IRRKQI 301
+RRK++
Sbjct: 489 LRRKEL 494
>gi|402862797|ref|XP_003895729.1| PREDICTED: poly(A) polymerase beta [Papio anubis]
Length = 637
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 138/306 (45%), Positives = 193/306 (63%), Gaps = 12/306 (3%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAK +YSN+ GFLGGV+WA
Sbjct: 192 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWA 251
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
+LVAR CQLYPNAV S LV +FF V++ W WPNPV+L +E L VWDPR N D+
Sbjct: 252 MLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRY 311
Query: 125 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 184
H MPIITPAYP NS+YNVS ST VM+++F+ G I E+ L+KA+WS LFE FF+
Sbjct: 312 HLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQK 371
Query: 185 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDT 239
Y++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 YKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDM 431
Query: 240 SKPCAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSH 295
+ + +GL +KP E++ +DI+ + ++ ++N MF + GM+I H
Sbjct: 432 EE--FRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAMNSKMF-EMGMKITAMH 488
Query: 296 IRRKQI 301
+RRK++
Sbjct: 489 LRRKEL 494
>gi|67971414|dbj|BAE02049.1| unnamed protein product [Macaca fascicularis]
Length = 548
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 429
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 430 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 487
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 488 VKRKQL 493
>gi|55669560|pdb|1Q78|A Chain A, Crystal Structure Of Poly(A) Polymerase In Complex With
3'- Datp And Magnesium Chloride
Length = 514
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 190/306 (62%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRXIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 429
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 430 KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 487
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 488 VKRKQL 493
>gi|409050023|gb|EKM59500.1| hypothetical protein PHACADRAFT_250043 [Phanerochaete carnosa
HHB-10118-sp]
Length = 556
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 201/368 (54%), Gaps = 48/368 (13%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +RSLNG RV D+IL+LVPNVE F LRC+K WA+++ +YSNV GFLGGV
Sbjct: 178 NLLRNLDERCIRSLNGSRVTDEILRLVPNVEVFRDALRCIKLWAQKKAIYSNVNGFLGGV 237
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYP+AV +VSRFF + W WP PV+L I++ L VW+PR
Sbjct: 238 AWAMLVARICQLYPSAVAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLPVRVWNPRLYPA 297
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MPIITPAYP M +++NVS ST +M ++F+ G+ I E+V + QWS LF + F
Sbjct: 298 DRSHRMPIITPAYPSMCATHNVSQSTQMIMTEEFKKGSEIVEKVIMGTTQWSELFVKHDF 357
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F YR YLQV + D + W G VESR+RQL + +E + H +V +
Sbjct: 358 FHKYRYYLQVIASTGDPDLHIKWAGTVESRIRQLVMKLEY-----VDSLTLAHPFVKGFE 412
Query: 242 PCAHC--------------------------------------AFFMGLQRKPGEVVQEG 263
HC F++GL +P + G
Sbjct: 413 QVTHCLTDDEVRDAAQGEISDAIAKRKKEDIEGKEGASVVYSTTFYIGLAIEPKQAGAVG 472
Query: 264 -QQFDIRGSVEEFKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQ 321
++ DI EF + M+ + + M I V HI+ +P +VF EG R PR A +
Sbjct: 473 PRRLDISYPTTEFTKQVKMWEKYDESAMGIVVRHIKSTALPDHVFDEG---ERQPRSALK 529
Query: 322 QRSSENGN 329
+ + G+
Sbjct: 530 RPKTAKGS 537
>gi|354467761|ref|XP_003496337.1| PREDICTED: poly(A) polymerase beta-like [Cricetulus griseus]
Length = 642
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 188/306 (61%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN++ F TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 252
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 253 LVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 312
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I E+ LNKA+WS LFE FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKY 372
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E VD
Sbjct: 373 KHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENVD-- 430
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN MF + M+I H
Sbjct: 431 KEEFRTMWVIGLVLKKPE-NSESLSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMH 488
Query: 296 IRRKQI 301
++RK++
Sbjct: 489 LKRKEL 494
>gi|195057028|ref|XP_001995187.1| GH22767 [Drosophila grimshawi]
gi|193899393|gb|EDV98259.1| GH22767 [Drosophila grimshawi]
Length = 857
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 173/499 (34%), Positives = 253/499 (50%), Gaps = 81/499 (16%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D +VRSLNGCRV D+IL LVPN+E+F LR +K WAK+ G+YSN G+ GGV
Sbjct: 194 NLLKNLDPRSVRSLNGCRVTDEILALVPNIENFRLALRAIKLWAKKHGIYSNSLGYFGGV 253
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR CQLYPNA + LV +FF V++ W+WPNPV+L D L F VWDPR N
Sbjct: 254 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNAS 313
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS++NVS ST +V++ +F G +I +E+ L + W LFE F
Sbjct: 314 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMSITDEIMLGRVNWDRLFEAPSF 373
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEY 236
F YR+++ + + + ADD L W G VES++R L +ER+ + L +C
Sbjct: 374 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFELKKGA 433
Query: 237 VDTS-------------------------KPCA------HCAF-FMGLQRKPGEVVQEGQ 264
V + KP C+ F+GL+ + E +
Sbjct: 434 VTANNSQNNSGNEDDLKQQQQQQQQQKDEKPATSTVAAPFCSLWFIGLEFERSENL---- 489
Query: 265 QFDIRGSVEEFKLSINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS 320
D+ S++ F + M+ K GM I H++RKQ+ Y+ + KR R
Sbjct: 490 NIDLTESIQNFTEHVIMHGVNIKMLKEGMAIDARHVKRKQLSVYLDADFLKRER------ 543
Query: 321 QQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRS-GT 379
+S E+ N + T RK+ + + + + + P +Q S A SS R +
Sbjct: 544 --KSMESHNNFNTTMLANRKR----LSTELAQSQDPLPPGQQQS------AASSNRGRES 591
Query: 380 GSNVEPVIPDKRVLNQEIAEGGDVSN-SSVITSVTSEVGSCEDVGNESVAGSSEGNNGSV 438
G+ V L++ + E D SN SS + V + + S + GNNG+
Sbjct: 592 GAKVHR-------LSESLNE--DNSNASSDMGGVMPTTPTASQMNAPSFKAKAGGNNGTT 642
Query: 439 EGSNNPVSSQSDCCDADSQ 457
E S S C D +S+
Sbjct: 643 ESS-------SSCLDNNSE 654
>gi|195487053|ref|XP_002091755.1| GE13836 [Drosophila yakuba]
gi|194177856|gb|EDW91467.1| GE13836 [Drosophila yakuba]
Length = 820
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 152/399 (38%), Positives = 218/399 (54%), Gaps = 49/399 (12%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D +VRSLNGCRV D+IL LVPN+E+F LR +K WAK+ G+YSN G+ GGV
Sbjct: 196 NLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 255
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR CQLYPNA + LV +FF V++ W+WPNPV+L D L F VWDPR N
Sbjct: 256 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNAS 315
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS++NVS ST +V++ +F G I +E+ L + W LFE F
Sbjct: 316 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSF 375
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVD-- 238
F YR+++ + + + ADD L W G VES++R L +ER+ + L +P E+
Sbjct: 376 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQ 435
Query: 239 -------------------------TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVE 273
TS P +F+GL+ + E + D+ S++
Sbjct: 436 SANNSQNNSGNEDDLKQSQGSQSAVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQ 490
Query: 274 EFKLSINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGN 329
F + M+ K GM I H++RKQ+ Y+ + KR R +S E+ N
Sbjct: 491 NFTEHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRER--------KSMESHN 542
Query: 330 EYQTGSGLKRKK----DPESVDQDGPEKRQSISPQKQDS 364
+ T RK+ +S D P ++QS + +DS
Sbjct: 543 NFNTTLLANRKRLSTELAQSQDPLPPGQQQSSGNRGRDS 581
>gi|395845544|ref|XP_003804110.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase beta [Otolemur
garnettii]
Length = 637
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 142/329 (43%), Positives = 201/329 (61%), Gaps = 16/329 (4%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAK +YSN+ GFLGGV+WA
Sbjct: 192 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWA 251
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
+LVAR CQLYPNAV S LV +FF V++ W WPNPV+L +E L VWDPR N D+
Sbjct: 252 MLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRY 311
Query: 125 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 184
H MPIITPAYP NS+YNVS ST VM+++F+ G I E+ L+KA+WS LFE FF+
Sbjct: 312 HLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQK 371
Query: 185 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDT 239
Y++Y+ + A L W G VES++R L +E++ + L Q P P E +
Sbjct: 372 YKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NP 429
Query: 240 SKPCAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSH 295
K + +GL +KP E++ +DI+ + ++ +IN MF + M+I H
Sbjct: 430 EKEEFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINTKMF-EMDMKIAAMH 488
Query: 296 IRRKQ----IPPYVFPEGYKRTRHPRLAS 320
++RK+ +P +V + +T RL +
Sbjct: 489 LKRKELHQLLPDHVLQKKKTQTEGVRLTA 517
>gi|120952595|ref|NP_991321.2| poly(A) polymerase alpha [Danio rerio]
Length = 723
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 134/306 (43%), Positives = 188/306 (61%), Gaps = 8/306 (2%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D +RSLNGCRV D+IL LVPN+E+F TLR +K WAKR +YSN+ GFLGGV+
Sbjct: 188 LLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVS 247
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQLYPNAV + LV +FF V++ W WPNPV+L ++ L VWDPR D
Sbjct: 248 WAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSD 307
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS+YNVS ST +M+++F+ G I +E+ NKA WS LFE FF
Sbjct: 308 RYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFF 367
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYV 237
+ Y++Y+ + A L W G VES++R L +E++ + L Q P P E
Sbjct: 368 QKYKHYIVLLASAQTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPGPKEGN 427
Query: 238 DTSKPCAHCAFFMGLQRKPG-EVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSH 295
D + + ++ G E + FDI+ + ++ +I MF + M+I H
Sbjct: 428 DKEEFSTMWVIGIVFKKMEGSENLNVDLTFDIQSFTDTVYRQAITSKMFEQ-DMKITAMH 486
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 487 VKRKQL 492
>gi|449549561|gb|EMD40526.1| hypothetical protein CERSUDRAFT_80191 [Ceriporiopsis subvermispora
B]
Length = 629
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 158/438 (36%), Positives = 223/438 (50%), Gaps = 54/438 (12%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE VRSLNG RV D+IL+LVPNV F +LRC+K WA+RR +YSNV GFLGGV
Sbjct: 176 NLLRNLDERCVRSLNGSRVTDEILRLVPNVSVFRDSLRCIKLWAQRRAIYSNVNGFLGGV 235
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA+ +VSRFF + W WP PV+L I++ L VW+P+
Sbjct: 236 AWAMLVARICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLPVRVWNPKLYPA 295
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP M +++NVS ST +M ++F+ G+ I ++V + KA WS LF + F
Sbjct: 296 DRAHRMPIITPAYPSMCATHNVSASTQMIMTEEFKKGSEIVDKVIVGKANWSELFAKHDF 355
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH------- 234
F YR YLQV + + W G VESR+RQL + +E L HP+
Sbjct: 356 FHKYRYYLQVIASTGSQELQTKWAGTVESRIRQLVMKLEYVDSLTL-AHPFIKGFEQVSC 414
Query: 235 ---------------------------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQF 266
E D + F++GL +P + G ++
Sbjct: 415 CLSDEEVRAVAQGEISEVIAKRKKEDIEGKDGASTVYSTTFYIGLAIEPKQPGAVGPRKL 474
Query: 267 DIRGSVEEFKLSINMYMFWKPG-MEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ-RS 324
DI EF + M+ + M I V HI+ +P YVF G R PR A ++ ++
Sbjct: 475 DISYPTTEFTKLVKMWEKYDDSTMGIVVRHIKSTALPDYVFEPG---ERQPRSAQKRPKT 531
Query: 325 SENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSG-TGSNV 383
S+N ++ S D P K++ S +SL+ L P ++ G
Sbjct: 532 SKNADKSNNTS------------PDMPNKKRRASNSVSESLATTPLPPQPFKTAQNGVTS 579
Query: 384 EPVIPDKRVLNQEIAEGG 401
IP L + G
Sbjct: 580 TAAIPSPIALTAASSSNG 597
>gi|332257779|ref|XP_003277982.1| PREDICTED: poly(A) polymerase beta [Nomascus leucogenys]
Length = 637
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 137/306 (44%), Positives = 191/306 (62%), Gaps = 12/306 (3%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAK +YSN+ FLGGV+WA
Sbjct: 192 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILCFLGGVSWA 251
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
+LVAR CQLYPNAV S LV +FF V++ W WPNPV+L ++ L VWDPR N D+
Sbjct: 252 MLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEQRNLNLPVWDPRVNPSDRY 311
Query: 125 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 184
H MPIITPAYP NS+YNVS ST VM+++F+ G I E+ L KA+WS LFE FF+
Sbjct: 312 HLMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLRKAEWSKLFEAPSFFQK 371
Query: 185 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDT 239
Y++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 YKHYIVLLASATTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENTDM 431
Query: 240 SKPCAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSH 295
K + +GL +KP E++ +DI+ + ++ ++N MF + GM+I H
Sbjct: 432 EK--FRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EVGMKITAMH 488
Query: 296 IRRKQI 301
+RRK++
Sbjct: 489 LRRKEL 494
>gi|363731198|ref|XP_003640929.1| PREDICTED: poly(A) polymerase gamma-like [Gallus gallus]
Length = 716
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 165/487 (33%), Positives = 245/487 (50%), Gaps = 42/487 (8%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E+F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 186 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGV 245
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQL+PNA+ S LV +FF +++ W WPNPV+L +E L VWDPR N
Sbjct: 246 SWAMLVARTCQLHPNALASTLVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPS 305
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST V++++ ++G + E+ ++ W LFE F
Sbjct: 306 DRYHVMPIITPAYPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGRSDWPKLFEQPNF 365
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ Y++Y+ + + L W G VES++R L +ER+ + + H P + +
Sbjct: 366 FQKYKHYIVLTASTYTEEHHLEWVGLVESKIRVLVGNLERNEFINI-AHVNPQSFPGNQE 424
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
C + F+G+ + + E + +DI+ + N K GM+I +
Sbjct: 425 HCKQSRYVSMWFLGIIFRKLESAESTKIDLTYDIQSFTDAVYRQANNINMLKEGMKIETA 484
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKR 354
+++RK + Y P G + R + N Q SGL+ K+ + +
Sbjct: 485 YVKRKHL-HYFLPAGTLQKR--------KKQSMLNISQNASGLRCKRASSNESLNSSRDN 535
Query: 355 QSISPQKQDSLSP----DHLAPSSVRSGTGSNVE----------------PVIPDKRVLN 394
S +P SLS D R+ +N E PVI K
Sbjct: 536 HSRTPYNSSSLSMISKLDTSTAEMERTNGANNREKMTHVPVSPVSKGISIPVIGSKMEAA 595
Query: 395 QEIAEGGDVSNSSVITSV----TSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSD 450
I G S+ ++ T + S++ +C G+ ++G+ N+ S P S S
Sbjct: 596 VAIRTSGAPSDCTIPTVIGRNAISQLTTCFVQGHHELSGTQITNSKSA-APKRPHSPASK 654
Query: 451 CCDADSQ 457
C S+
Sbjct: 655 ECSKRSK 661
>gi|392568429|gb|EIW61603.1| polymerase [Trametes versicolor FP-101664 SS1]
Length = 607
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 146/346 (42%), Positives = 197/346 (56%), Gaps = 49/346 (14%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++DE ++RSLNG RV ++IL+LVPNV+ F T LRC+K WA++R VYSNV GFLGGV WA+
Sbjct: 180 NLDEKSIRSLNGSRVINEILRLVPNVDVFRTALRCIKLWAQKRAVYSNVNGFLGGVAWAM 239
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVARVCQLYPNAV +VSRFF + W WP PV+L I++ L VW+P+ +D++H
Sbjct: 240 LVARVCQLYPNAVAGAIVSRFFVIMHKWSWPQPVLLKPIEDGPLQVRVWNPKVYSQDRSH 299
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP M +++NV ST ++M ++FQ G I ++V L KA+WSALF + FF+ Y
Sbjct: 300 RMPIITPAYPSMCATHNVMQSTQQIMKEEFQRGCAIVDDVMLGKAEWSALFVKHDFFQRY 359
Query: 186 RNYLQVDIVAANADDLL--AWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC 243
R YLQV VAA+ D + W G V S++RQL + +E KL HP+ + D C
Sbjct: 360 RFYLQV--VAASRDLEMQNKWSGTVASKIRQLVMRLEYVDALKL-AHPFIKGF-DVVYYC 415
Query: 244 AH-----------------------------------CAFFMGLQRKPGEVVQEG-QQFD 267
+FF+GL KP E G ++ D
Sbjct: 416 LSEEEAQVVTRGEIPPAVAQRKKEDVADKEGVITVHTTSFFIGLSIKPKEAGSTGPRRLD 475
Query: 268 IRGSVEEFKLSINMYMFWKP----GMEICVSHIRRKQIPPYVFPEG 309
I EF + M W+ M I V HI+ +P +VF G
Sbjct: 476 ISYPTTEF---VKMTKMWEKYDESAMHIAVRHIKHTVLPDFVFEPG 518
>gi|194755527|ref|XP_001960043.1| GF13172 [Drosophila ananassae]
gi|190621341|gb|EDV36865.1| GF13172 [Drosophila ananassae]
Length = 835
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 151/403 (37%), Positives = 217/403 (53%), Gaps = 48/403 (11%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D +VRSLNGCRV D+IL LVPN+E+F LR +K WAK+ G+YSN G+ GGV
Sbjct: 197 NLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 256
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR CQLYPNA + LV +FF V++ W+WPNPV+L D L F VWDPR N
Sbjct: 257 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNAS 316
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS++NVS ST +V++ +F G I +E+ L + W LFE F
Sbjct: 317 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWDRLFEAPSF 376
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVD-- 238
F YR+++ + + + ADD L W G VES++R L +ER+ + L +P E+
Sbjct: 377 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQ 436
Query: 239 -------------------------TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVE 273
TS P +F+GL+ + E + D+ S++
Sbjct: 437 SANSSQNNSGNEDDLKQSQGSQSSVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQ 491
Query: 274 EFKLSINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGN 329
F + M+ K GM I H++RKQ+ Y+ + KR R +S E+ N
Sbjct: 492 NFTEHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDADFLKRER--------KSMESHN 543
Query: 330 EYQTGSGLKRKKDPESVDQDG---PEKRQSISPQKQDSLSPDH 369
+ RK+ + Q P +QS + +DS + H
Sbjct: 544 NFNNTLLANRKRLSTELAQSQDSLPSGQQSSGNRGRDSGAKIH 586
>gi|426254899|ref|XP_004021112.1| PREDICTED: poly(A) polymerase beta [Ovis aries]
Length = 639
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 137/306 (44%), Positives = 192/306 (62%), Gaps = 12/306 (3%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAK +YSN+ GFLGGV+WA
Sbjct: 192 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWA 251
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+
Sbjct: 252 MLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRY 311
Query: 125 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 184
H MPIITPAYP NS+YNVS ST VM+++F+ G I E+ L+KA+WS LFE FF+
Sbjct: 312 HLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQK 371
Query: 185 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDT 239
Y++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 YKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDK 431
Query: 240 SKPCAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSH 295
+ + +GL +KP EV+ +DI+ + ++ +IN MF + M+I H
Sbjct: 432 EE--FRTMWVIGLVLKKPENSEVLSIDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 488
Query: 296 IRRKQI 301
++RK++
Sbjct: 489 LKRKEL 494
>gi|194881425|ref|XP_001974840.1| GG20896 [Drosophila erecta]
gi|190658027|gb|EDV55240.1| GG20896 [Drosophila erecta]
Length = 818
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 217/399 (54%), Gaps = 49/399 (12%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D +VRSLNGCRV D+IL LVPN+E+F LR +K WAK+ G+YSN G+ GGV
Sbjct: 198 NLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 257
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR CQLYPNA + LV +FF V++ W+WPNPV+L D L F VWDPR N
Sbjct: 258 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNAS 317
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS++NVS ST +V++ +F G I +E+ L + W LFE F
Sbjct: 318 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRISWERLFEAPSF 377
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVD-- 238
F YR+++ + + + ADD L W G VES++R L +ER+ + L +P E+
Sbjct: 378 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFRKGQ 437
Query: 239 -------------------------TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVE 273
TS P +F+GL+ + E + D+ S++
Sbjct: 438 SANNSQNNSGNEDDLKQSQGNQSAVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQ 492
Query: 274 EFKLSINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGN 329
F + M+ K GM I H++RKQ+ Y+ + KR R +S E+ N
Sbjct: 493 NFTEHVTMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRER--------KSMESHN 544
Query: 330 EYQTGSGLKRKK----DPESVDQDGPEKRQSISPQKQDS 364
+ RK+ +S D P ++QS + +DS
Sbjct: 545 NFNNTLLANRKRLSTELAQSQDPLPPGQQQSSGNRGRDS 583
>gi|326914719|ref|XP_003203670.1| PREDICTED: poly(A) polymerase gamma-like [Meleagris gallopavo]
Length = 860
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 206/353 (58%), Gaps = 15/353 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E+F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 324 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGV 383
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQL+PNA+ S LV++FF +++ W WPNPV+L +E L VWDPR N
Sbjct: 384 SWAMLVARTCQLHPNALASTLVNKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPS 443
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST V++++ ++G + E+ K+ W LFE F
Sbjct: 444 DRYHVMPIITPAYPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGKSDWPKLFEQPNF 503
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ Y++Y+ + + L W G VES++R L +ER+ + + H P + +
Sbjct: 504 FQKYKHYIVLTASTYTEEHHLEWVGLVESKIRVLVGNLERNEFINI-AHVNPQSFPGNQE 562
Query: 242 PCAHCAF----FMGLQRKPGEVVQEGQ---QFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
C + F+G+ + E + + +DI+ + N K GM+I +
Sbjct: 563 HCKQSRYVSMWFLGIIFRKLENTESTKIDLTYDIQSFTDAVYRQANNINMLKEGMKIETA 622
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVD 347
+++RK + Y P G + R +++S N ++ TG KR ES++
Sbjct: 623 YVKRKHL-HYFLPAGTLQKR------KKQSILNISQNATGLRCKRASSNESLN 668
>gi|148686801|gb|EDL18748.1| poly (A) polymerase alpha, isoform CRA_b [Mus musculus]
Length = 540
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 138/313 (44%), Positives = 189/313 (60%), Gaps = 21/313 (6%)
Query: 17 GCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN 76
GCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+LVAR CQLYPN
Sbjct: 4 GCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPN 63
Query: 77 AVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 136
A+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIITPAYP
Sbjct: 64 AIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 123
Query: 137 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 196
NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+ + A
Sbjct: 124 QNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 183
Query: 197 NADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMG 251
L W G VES++R L +E++ + L Q P P E D + + +G
Sbjct: 184 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE--FRTMWVIG 241
Query: 252 LQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IP 302
L K E E D+ ++ F + +IN MF + M+I H++RKQ +P
Sbjct: 242 LVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMHVKRKQLHQLLP 299
Query: 303 PYVFPEGYKRTRH 315
+V KR +H
Sbjct: 300 SHVL---QKRKKH 309
>gi|241643377|ref|XP_002411054.1| poly(A) polymerase, putative [Ixodes scapularis]
gi|215503685|gb|EEC13179.1| poly(A) polymerase, putative [Ixodes scapularis]
Length = 492
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/304 (44%), Positives = 183/304 (60%), Gaps = 11/304 (3%)
Query: 1 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
+++L ++D VRSLNGCRV D+IL LVPN E F +LR +K WAK+ GVYSNV G+LGG
Sbjct: 194 VNILKNLDPKCVRSLNGCRVTDEILHLVPNRETFRLSLRAIKLWAKKHGVYSNVLGYLGG 253
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNR 120
V+WA+LVAR CQLYPNA + LV +FF V++ W WP PV+L +E +LGF VWDPR N
Sbjct: 254 VSWAMLVARTCQLYPNAAAATLVHKFFLVFSQWPWPKPVLLKQPEENKLGFPVWDPRINV 313
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
D+ H MPIITPAYP NS++NVS ST +M +F+ G I +E+ L + +W LFEP
Sbjct: 314 ADRFHLMPIITPAYPQQNSTFNVSVSTRTIMRQEFKQGLAITDEIMLGRTEWIKLFEPPN 373
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
FF Y++++ + + L W G VES++R L +ER Y ++ H P +
Sbjct: 374 FFGKYKHFIVLMATTMTKEHHLEWYGLVESKIRILISNLERHPYIEI-AHVNPESF---- 428
Query: 241 KPC------AHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
PC +F+GLQ E V +DIR V+ K K ME+ +
Sbjct: 429 PPCEPDGDKLQSMWFIGLQFSKTEHVNVDLTYDIRSFVDTVKRQATAINILKQDMEVDIK 488
Query: 295 HIRR 298
++RR
Sbjct: 489 YVRR 492
>gi|311250845|ref|XP_003124320.1| PREDICTED: poly(A) polymerase beta-like [Sus scrofa]
Length = 640
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 139/323 (43%), Positives = 199/323 (61%), Gaps = 14/323 (4%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAK +YSN+ GFLGGV+WA
Sbjct: 191 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAVKLWAKCHNIYSNILGFLGGVSWA 250
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+
Sbjct: 251 MLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRY 310
Query: 125 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 184
H MPIITPAYP NS+YNVS ST VM+++F+ G I E+ L+KA+WS LFE FF+
Sbjct: 311 HLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQK 370
Query: 185 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDT 239
Y++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 371 YKHYIALLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPRESPDK 430
Query: 240 SKPCAHCAFFMGLQR-KPGEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIR 297
+ + L+R + +++ +DI+ + ++ ++N MF + M+I H+R
Sbjct: 431 EEFRTMWVIGLVLKRPENSDILSIDLTYDIQSFTDTVYRQAVNSKMF-EMDMKIAAMHLR 489
Query: 298 RKQ----IPPYVFPEGYKRTRHP 316
RK+ +P +V P+ K+T P
Sbjct: 490 RKELHQLLPNHVLPQ--KKTPSP 510
>gi|195335951|ref|XP_002034618.1| GM19819 [Drosophila sechellia]
gi|194126588|gb|EDW48631.1| GM19819 [Drosophila sechellia]
Length = 814
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/372 (38%), Positives = 206/372 (55%), Gaps = 45/372 (12%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D +VRSLNGCRV D+IL LVPN+E+F LR +K WAK+ G+YSN G+ GGV
Sbjct: 196 NLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 255
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR CQLYPNA + LV +FF V++ W+WPNPV+L D L F VWDPR N
Sbjct: 256 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNAS 315
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS++NVS ST +V++ +F G I +E+ L + W LFE F
Sbjct: 316 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSF 375
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYP--- 233
F YR+++ + + + ADD L W G VES++R L +ER+ + L +C +
Sbjct: 376 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQ 435
Query: 234 --------------------HEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVE 273
++ TS P +F+GL+ + E + D+ S++
Sbjct: 436 SANNSQNNSGNEDDLKQSQGNQSAVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQ 490
Query: 274 EFKLSINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGN 329
F + M+ K GM I H++RKQ+ Y+ + KR R +S E+ N
Sbjct: 491 NFTEHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRER--------KSMESHN 542
Query: 330 EYQTGSGLKRKK 341
+ RK+
Sbjct: 543 NFNNTLLANRKR 554
>gi|390601592|gb|EIN10986.1| Poly(A) polymerase [Punctularia strigosozonata HHB-11173 SS5]
Length = 582
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/361 (40%), Positives = 197/361 (54%), Gaps = 38/361 (10%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++DE VRSLNG RV D IL+LVP V F LRC+K WA R+ +YSNV GFLGGV WA+
Sbjct: 180 NLDERCVRSLNGSRVTDAILRLVPEVNVFRVALRCIKLWATRKAIYSNVNGFLGGVAWAM 239
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVARVCQLYPNA +VSRFF + W+WP PV+L I+E L VW+P+ D+ H
Sbjct: 240 LVARVCQLYPNACAGAIVSRFFIIMYQWKWPQPVLLKTIEEGPLNVRVWNPKLYPTDRAH 299
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP M +++NV ST ++ ++ + G+ + E++ + A WS LF + FF+ Y
Sbjct: 300 RMPIITPAYPAMCATHNVMASTQMIITEELKKGSELVEKIIVGTADWSELFIKHDFFDKY 359
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS----- 240
R YLQV NAD L W G VESR+RQL + +E L HP+ + S
Sbjct: 360 RYYLQVIASTGNADLQLKWSGTVESRIRQLVMKLEYVDSLTL-AHPFIKGFEQVSYCLSD 418
Query: 241 ---KPCAH--------------------------CAFFMGLQRKPGEVVQEG-QQFDIRG 270
+ A F++GL +P + G ++ DI
Sbjct: 419 EEVRAVAQGEISETVKKRVLEDIKDKEGASTVYTTTFYIGLAIEPKQPGSNGPRKLDISY 478
Query: 271 SVEEFKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR-HPRLASQQRSSENG 328
EF + M+ F + M I V HIR +P YVF EG ++TR R + + S ++G
Sbjct: 479 PTTEFTKLVKMWEKFDEAKMGIVVRHIRHTALPDYVFGEGGRQTRPQKRPKTSKNSGQSG 538
Query: 329 N 329
N
Sbjct: 539 N 539
>gi|195584945|ref|XP_002082256.1| GD25311 [Drosophila simulans]
gi|194194265|gb|EDX07841.1| GD25311 [Drosophila simulans]
Length = 815
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/372 (38%), Positives = 205/372 (55%), Gaps = 45/372 (12%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D +VRSLNGCRV D+IL LVPN+E+F LR +K WAK+ G+YSN G+ GGV
Sbjct: 196 NLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 255
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR CQLYPNA + LV +FF V++ W+WPNPV+L D L F VWDPR N
Sbjct: 256 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNAS 315
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS++NVS ST +V++ +F G I +E+ L + W LFE F
Sbjct: 316 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSF 375
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVD-- 238
F YR+++ + + + ADD L W G VES++R L +ER+ + L +P E+
Sbjct: 376 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQ 435
Query: 239 -------------------------TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVE 273
TS P +F+GL+ + E + D+ S++
Sbjct: 436 SANNSQNNSGNEDDLKQSQGNQSAVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQ 490
Query: 274 EFKLSINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGN 329
F + M+ K GM I H++RKQ+ Y+ + KR R +S E+ N
Sbjct: 491 NFTEHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRER--------KSMESHN 542
Query: 330 EYQTGSGLKRKK 341
+ RK+
Sbjct: 543 NFNNTLLANRKR 554
>gi|357621141|gb|EHJ73080.1| poly a polymerase [Danaus plexippus]
Length = 615
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/347 (40%), Positives = 196/347 (56%), Gaps = 38/347 (10%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D+ VRSLNGCRV D+IL+LVP++ F TLR +K WAKR G+YSN G+LGGV+
Sbjct: 200 LLKNLDQKCVRSLNGCRVTDEILRLVPDINTFRLTLRAIKLWAKRHGIYSNTLGYLGGVS 259
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQLYPNA+P+ L+ +FF V++ W+WP PV+L D LGF VWDPR N D
Sbjct: 260 WAMLVARTCQLYPNALPATLLHKFFLVFSQWKWPQPVLLKPPDSVNLGFPVWDPRVNMSD 319
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS++NVS+ST V+M++F+ G I +E+ L K W LFE FF
Sbjct: 320 RYHLMPIITPAYPQQNSTFNVSSSTRTVIMEEFRLGLAITDEIMLGKCGWERLFEAANFF 379
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY------ 236
Y++++ + +AN D L W G VES++R L +ER+ + + H P Y
Sbjct: 380 SRYKHFIVLLASSANTLDQLPWCGLVESKIRHLITTLERNQHITI-AHVNPECYNSVPLN 438
Query: 237 VDTSKPCA-----------HCAFFMGLQRKPGEVVQE-------GQQFDIRGSVEEFKLS 278
+ P A H A ++ GE+V G FD +
Sbjct: 439 TNNGHPLALPPGTPVQTEEHGA--AEVKNDKGEIVANVCSMWFIGLVFDKTNVNVDLTYD 496
Query: 279 INMYM-----------FWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 314
I+ + + GM I H+RRKQ+ Y+ P +R +
Sbjct: 497 ISSFTKAVHYQAENTNVLREGMTIEARHVRRKQLHQYLSPSLLRREK 543
>gi|442624286|ref|NP_001261097.1| hiiragi, isoform D [Drosophila melanogaster]
gi|440214537|gb|AGB93629.1| hiiragi, isoform D [Drosophila melanogaster]
Length = 827
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/372 (38%), Positives = 205/372 (55%), Gaps = 45/372 (12%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D +VRSLNGCRV D+IL LVPN+E+F LR +K WAK+ G+YSN G+ GGV
Sbjct: 196 NLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 255
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR CQLYPNA + LV +FF V++ W+WPNPV+L D L F VWDPR N
Sbjct: 256 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNAS 315
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS++NVS ST +V++ +F G I +E+ L + W LFE F
Sbjct: 316 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSF 375
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVD-- 238
F YR+++ + + + ADD L W G VES++R L +ER+ + L +P E+
Sbjct: 376 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQ 435
Query: 239 -------------------------TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVE 273
TS P +F+GL+ + E + D+ S++
Sbjct: 436 SANNSQNNSGNEDDLKQSQGNQSAVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQ 490
Query: 274 EFKLSINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGN 329
F + M+ K GM I H++RKQ+ Y+ + KR R +S E+ N
Sbjct: 491 NFTEHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRER--------KSMESHN 542
Query: 330 EYQTGSGLKRKK 341
+ RK+
Sbjct: 543 NFNNTLLANRKR 554
>gi|291413714|ref|XP_002723110.1| PREDICTED: poly(A) polymerase beta (testis specific)-like
[Oryctolagus cuniculus]
Length = 629
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/351 (41%), Positives = 208/351 (59%), Gaps = 21/351 (5%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D +RSLNGCRV D+IL LVP++++F TLR +K WAK +YSN+ GFLGGV+WA
Sbjct: 192 KNLDIRCIRSLNGCRVTDEILHLVPDIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWA 251
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
+LVAR CQLYPNAV S LV +FF V++ W WPNPV+L +E L VWDPR N D+
Sbjct: 252 MLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRY 311
Query: 125 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 184
H MPIITPAYP NS+YNVS ST VM+++F+ G I E+ LNKA+WS LFE FF+
Sbjct: 312 HLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQK 371
Query: 185 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDT 239
Y++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 YKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDK 431
Query: 240 SKPCAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSH 295
+ + +GL +KP E++ +DI+ + ++ +IN F + M+I H
Sbjct: 432 EE--FRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKTF-EMDMKIDAMH 488
Query: 296 IRRKQIPPYVFPEGYKRTRHP----RLASQQRS-----SENGNEYQTGSGL 337
+RRK++ + ++ +HP RL + S SEN + +GL
Sbjct: 489 LRRKELHQLLPNHVLQKKKHPAEGVRLTAVSDSSLGTDSENSMPVPSPTGL 539
>gi|21064419|gb|AAM29439.1| RE25878p [Drosophila melanogaster]
Length = 659
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/372 (38%), Positives = 205/372 (55%), Gaps = 45/372 (12%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D +VRSLNGCRV D+IL LVPN+E+F LR +K WAK+ G+YSN G+ GGV
Sbjct: 196 NLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 255
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR CQLYPNA + LV +FF V++ W+WPNPV+L D L F VWDPR N
Sbjct: 256 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNAS 315
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS++NVS ST +V++ +F G I +E+ L + W LFE F
Sbjct: 316 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSF 375
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVD-- 238
F YR+++ + + + ADD L W G VES++R L +ER+ + L +P E+
Sbjct: 376 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLISNLERNPHIALAHVNPKCFEFKKGQ 435
Query: 239 -------------------------TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVE 273
TS P +F+GL+ + E + D+ S++
Sbjct: 436 SANNSQNNSGNEDDLKQSQGNQSAVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQ 490
Query: 274 EFKLSINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGN 329
F + M+ K GM I H++RKQ+ Y+ + KR R +S E+ N
Sbjct: 491 NFTEHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRER--------KSMESHN 542
Query: 330 EYQTGSGLKRKK 341
+ RK+
Sbjct: 543 NFNNTLLANRKR 554
>gi|72012045|ref|XP_780989.1| PREDICTED: poly(A) polymerase gamma [Strongylocentrotus purpuratus]
Length = 670
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 140/308 (45%), Positives = 184/308 (59%), Gaps = 12/308 (3%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D VRSLNGCRV D+IL +VP+ E+F TLR +K WAK++GVYSN GFLGGV
Sbjct: 182 SLLKNLDPKCVRSLNGCRVTDEILNVVPSKENFRLTLRTIKLWAKKKGVYSNALGFLGGV 241
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA-ELGFSVWDPRKNR 120
+WA+LVAR CQLYPNA S LV++FF V+T W WP PV+L + + ELGF+ WDPR N
Sbjct: 242 SWAMLVARTCQLYPNAAASTLVNKFFLVFTKWAWPQPVLLKPPNTSTELGFAEWDPRVNV 301
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
D+ H MPIITPAYP NS+YNVS ST V+ + Q G I +E+ KA W LFE
Sbjct: 302 SDRFHLMPIITPAYPQQNSTYNVSQSTKTVIEQELQGGLAITQEIMQGKATWEKLFESSN 361
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
FF Y++Y+ + A N DD L W G VES++R L +ER+ + KL H YP ++
Sbjct: 362 FFGKYKHYIVLIASAGNEDDHLKWVGLVESKIRVLVGNLERNPHIKL-AHVYPKSISPST 420
Query: 241 --------KPCAHCAF-FMGLQRKP-GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 290
K H F+GL+ +P G DI+ V + GM+
Sbjct: 421 PLDGSEEEKTDEHSTLWFIGLEFQPLGPATNVNLTLDIQFFVNTVHRHSVTIKLLQEGMK 480
Query: 291 ICVSHIRR 298
I H++R
Sbjct: 481 IEAKHVKR 488
>gi|119359931|dbj|BAF41975.1| testis-specific poly(A) polymerase [Homo sapiens]
Length = 637
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 136/304 (44%), Positives = 189/304 (62%), Gaps = 10/304 (3%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAK +YSN+ GF GGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFHGGVSWAM 252
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNAV S LV ++F V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 253 LVARTCQLYPNAVASTLVRKYFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 312
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM++ F+ G I E+ L KA WS LFE FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSISTRMVMIEVFKQGLAITHEILLTKAVWSKLFEAPSFFQKY 372
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A+ L W G VES++R L +E++ + L Q P P E D
Sbjct: 373 KHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDME 432
Query: 241 KPCAHCAFFMGLQRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIR 297
+ +GL +KP E++ +DI+ + ++ ++N MF + GM+I H+R
Sbjct: 433 EFRTMWVIGLGL-KKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAMHLR 490
Query: 298 RKQI 301
RK++
Sbjct: 491 RKEL 494
>gi|330340378|ref|NP_001193351.1| poly(A) polymerase beta [Bos taurus]
Length = 642
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 137/306 (44%), Positives = 192/306 (62%), Gaps = 12/306 (3%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAK +YSN+ GFLGGV+WA
Sbjct: 192 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWA 251
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR + D+
Sbjct: 252 MLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVSPSDRY 311
Query: 125 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 184
H MPIITPAYP NS+YNVS ST VM+++F+ G I E+ L+KA+WS LFE FF+
Sbjct: 312 HLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQK 371
Query: 185 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDT 239
Y++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 YKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPD- 430
Query: 240 SKPCAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSH 295
K + +GL +KP EV+ +DI+ + ++ +IN MF + M+I H
Sbjct: 431 -KEEFRTMWVIGLVLKKPENSEVLSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMH 488
Query: 296 IRRKQI 301
++RK++
Sbjct: 489 LKRKEL 494
>gi|17985991|ref|NP_536790.1| hiiragi, isoform A [Drosophila melanogaster]
gi|24655907|ref|NP_725919.1| hiiragi, isoform B [Drosophila melanogaster]
gi|116007728|ref|NP_001036562.1| hiiragi, isoform C [Drosophila melanogaster]
gi|7110522|gb|AAF36978.1|AF231704_1 poly A polymerase [Drosophila melanogaster]
gi|9453846|dbj|BAB03279.1| poly A polymerase [Drosophila melanogaster]
gi|21626946|gb|AAF57528.2| hiiragi, isoform A [Drosophila melanogaster]
gi|21626947|gb|AAM68424.1| hiiragi, isoform B [Drosophila melanogaster]
gi|25012374|gb|AAN71296.1| RE09914p [Drosophila melanogaster]
gi|113194668|gb|ABI31107.1| hiiragi, isoform C [Drosophila melanogaster]
gi|211938509|gb|ACJ13151.1| FI03258p [Drosophila melanogaster]
gi|220942518|gb|ACL83802.1| hrg-PA [synthetic construct]
gi|220952732|gb|ACL88909.1| hrg-PA [synthetic construct]
Length = 659
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 144/372 (38%), Positives = 205/372 (55%), Gaps = 45/372 (12%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D +VRSLNGCRV D+IL LVPN+E+F LR +K WAK+ G+YSN G+ GGV
Sbjct: 196 NLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 255
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR CQLYPNA + LV +FF V++ W+WPNPV+L D L F VWDPR N
Sbjct: 256 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNAS 315
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS++NVS ST +V++ +F G I +E+ L + W LFE F
Sbjct: 316 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSF 375
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVD-- 238
F YR+++ + + + ADD L W G VES++R L +ER+ + L +P E+
Sbjct: 376 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQ 435
Query: 239 -------------------------TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVE 273
TS P +F+GL+ + E + D+ S++
Sbjct: 436 SANNSQNNSGNEDDLKQSQGNQSAVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQ 490
Query: 274 EFKLSINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGN 329
F + M+ K GM I H++RKQ+ Y+ + KR R +S E+ N
Sbjct: 491 NFTEHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRER--------KSMESHN 542
Query: 330 EYQTGSGLKRKK 341
+ RK+
Sbjct: 543 NFNNTLLANRKR 554
>gi|330796347|ref|XP_003286229.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
gi|325083816|gb|EGC37259.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
Length = 671
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 188/312 (60%), Gaps = 23/312 (7%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +VDE ++ SLNGCRVADQILKLVPN+ +F LRC+K WA FLGG+ W
Sbjct: 217 LKNVDEKSILSLNGCRVADQILKLVPNIPNFRMALRCIKLWA---------ISFLGGITW 267
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA-ELGFSVWDPRKNRRD 122
ALL AR+CQLYPN+ PS +++RFF+VY W+WP PV+L + E L VW+ + RD
Sbjct: 268 ALLTARICQLYPNSAPSTIINRFFKVYENWKWPAPVLLTHLVEGGALAAKVWNAK---RD 324
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
K H MPI+TPAYP MNS+YNVS ST++++ ++F G I ++E N++ ++AL E FF
Sbjct: 325 KAHLMPILTPAYPMMNSTYNVSKSTMQLLKNEFVRGAEITRKIETNESTYNALLEKSDFF 384
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT--- 239
YR Y+Q+D A N +D W+GW+ES+LR L +E K P+P + +
Sbjct: 385 TRYRFYIQIDCSAGNEEDHRKWEGWIESKLRFLISNLEMTPKMKYAV-PFPKSFSNLIHK 443
Query: 240 -SKPCAHC-AFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME----ICV 293
S P C FFMGL + D+ +V EF +I ++ +P E I V
Sbjct: 444 ESHPDQICTTFFMGLVFNFPTTPGADKSVDLTKAVSEFTSTIKEWLRTQPNPETMADIKV 503
Query: 294 SHIRRKQIPPYV 305
+I++KQ+P ++
Sbjct: 504 QYIKKKQLPSFI 515
>gi|195380742|ref|XP_002049128.1| GJ21414 [Drosophila virilis]
gi|194143925|gb|EDW60321.1| GJ21414 [Drosophila virilis]
Length = 880
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/376 (38%), Positives = 207/376 (55%), Gaps = 50/376 (13%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D +VRSLNGCRV D+IL LVPN+E+F LR +K WAK+ G+YSN G+ GGV
Sbjct: 207 NLLKNLDPRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 266
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR CQLYPNA + LV +FF V++ W+WPNPV+L D L F VWDPR N
Sbjct: 267 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFPVWDPRVNAS 326
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS++NVS ST +V++ +F G +I +E+ L + W LFE F
Sbjct: 327 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMSITDEIMLGRVSWDRLFEAPSF 386
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPY---- 232
F YR+++ + + + ADD L W G VES++R L +ER+ + L +C
Sbjct: 387 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIVLAHVNPKCFELKKGA 446
Query: 233 ----------------------PHEYVDTSKPCAHCAF-FMGLQRKPGEVVQEGQQFDIR 269
P + T+ P C+ F+GL+ + E + D+
Sbjct: 447 ASANNSQNNSGNEEDLKQQQQQPAQTAVTTAP--FCSLWFIGLEFERSENL----NIDLT 500
Query: 270 GSVEEFKLSINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
S++ F + M+ K GM I H++RKQ+ Y+ + KR R +S
Sbjct: 501 ESIQNFTEHVIMHGLNIKMLKEGMAIDARHLKRKQLSLYLDADFLKRER--------KSM 552
Query: 326 ENGNEYQTGSGLKRKK 341
E+ N + RK+
Sbjct: 553 ESHNNFNNTLLANRKR 568
>gi|195431638|ref|XP_002063835.1| GK15696 [Drosophila willistoni]
gi|194159920|gb|EDW74821.1| GK15696 [Drosophila willistoni]
Length = 872
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/382 (37%), Positives = 207/382 (54%), Gaps = 56/382 (14%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D +VRSLNGCRV D+IL LVPN+E+F LR +K WAK+ G+YSN G+ GGV
Sbjct: 208 NLLKNLDPRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 267
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR CQLYPNA + LV +FF V++ W+WPNPV+L D L F VWDPR N
Sbjct: 268 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFPVWDPRVNAS 327
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS++NVS ST +V++ +F G I +E+ L + W LFE F
Sbjct: 328 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRVPWERLFEAPSF 387
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEY---- 236
F YR+++ + + + ADD L W G VES++R L +ER+ + L +P E+
Sbjct: 388 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNAHIALAHVNPKCFEFKKGQ 447
Query: 237 ---------------------------------VDTSKPCAHCAFFMGLQRKPGEVVQEG 263
V +S C+ +F+GL+ + + +
Sbjct: 448 SANSSQNNSGNEDDPKQTQQQQTNNQANAAASTVTSSPFCS--MWFIGLEFERSDNL--- 502
Query: 264 QQFDIRGSVEEFKLSINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLA 319
D+ S++ F + M+ K GM I H++RKQ+ Y+ + KR R
Sbjct: 503 -NIDLTESIQNFTEHVIMHGVNIKMLKEGMTIDARHVKRKQLSLYLDADFLKRER----- 556
Query: 320 SQQRSSENGNEYQTGSGLKRKK 341
+S EN N + RK+
Sbjct: 557 ---KSMENHNNFNNTLLANRKR 575
>gi|340376009|ref|XP_003386526.1| PREDICTED: poly(A) polymerase gamma-like [Amphimedon queenslandica]
Length = 689
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 158/392 (40%), Positives = 221/392 (56%), Gaps = 28/392 (7%)
Query: 1 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
MS+L ++D VRSLNGCRV D ILKLVPN E F LR +K WAKRRG+YSN G+LGG
Sbjct: 177 MSLLKNLDAKCVRSLNGCRVTDSILKLVPNQETFRLALRAIKLWAKRRGIYSNALGYLGG 236
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFS--VWDPRK 118
V+WA+LVAR CQLYPNA S +V +FF V+ W WP PV+L +E LG + VW+P+
Sbjct: 237 VSWAMLVARTCQLYPNAASSTIVLKFFFVFEKWNWPQPVLLRKAEEDVLGLNLQVWNPQV 296
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP 178
N D H MPIITPAYP NS++NV+ ST VM+++F+ G IC ++++ K W LFEP
Sbjct: 297 NPGDAHHLMPIITPAYPQQNSTFNVTKSTRDVMLNEFRRGLDICRDIDVGKLSWDILFEP 356
Query: 179 YLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHP--YPHE 235
FF Y++Y+ + A ++D LL W G VES++R L +E + K+ +P YP
Sbjct: 357 IKFFSLYKHYIVICATAIDSDLLLKWSGLVESKIRILIGKLEDNENIKIAHVNPTSYPRI 416
Query: 236 YVDTSKPCAHCAFFMGLQ--RKPGEV----VQEGQQFDIRGSVEEFKLSINMYMFWKPGM 289
D++ +H +F+GL+ PG V E Q F I V+ L + + + G
Sbjct: 417 VPDSTD--SHLMWFIGLEFCVGPGGVNITLTYEIQMF-INSVVKSPALQSSPDL--RNGT 471
Query: 290 EICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQD 349
++ V H RR+ + Y+ P+ P L +++ E + LKR E V++
Sbjct: 472 QLDVKHARRRDLSDYLSPDIV-----PPLPKKKKQFPIDIETPSPI-LKRVHKIERVEEP 525
Query: 350 GPEKRQSISPQKQDSLSPDHLAPSSVRSGTGS 381
KR I PD L SS+ G +
Sbjct: 526 RVSKRIKIMDD------PDSLTDSSIGGGEAT 551
>gi|449682525|ref|XP_002165152.2| PREDICTED: poly(A) polymerase gamma-like, partial [Hydra
magnipapillata]
Length = 351
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/329 (40%), Positives = 203/329 (61%), Gaps = 15/329 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D VRSLNGCRV D+IL LVPN+ +F TLR +K WAK + VYSNV GFLGGV+WA+
Sbjct: 27 NLDARCVRSLNGCRVTDEILHLVPNIANFRMTLRAIKLWAKNQFVYSNVLGFLGGVSWAM 86
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-DEAELGFSVWDPRKNRRDKT 124
LVAR+CQLYPNA+ + LV +FF +Y+ W WP PV+L + E +L F +WDPR N D+
Sbjct: 87 LVARICQLYPNAIAATLVQKFFLIYSKWAWPQPVLLKQMPTENKLNFPIWDPRMNPADRF 146
Query: 125 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 184
H MPIITPAYP NS++NVS S+ VM D F+ G + EE+ + W ALF P FF+
Sbjct: 147 HLMPIITPAYPQQNSTFNVSMSSRTVMQDAFKRGFQVMEEIYSKTSTWKALFAPANFFQK 206
Query: 185 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVDTSKPC 243
Y++Y+ + + +++ L W+G VES++R L + +ER+ + KL +P ++ + S+
Sbjct: 207 YKHYIVLSAYSNSSEHHLEWEGLVESKIRILIVNLERNQFVKLAHVNPKSYDPILKSESG 266
Query: 244 AHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN----MYMFWKPGMEICVSHIRRK 299
+F+GL+ + E + + DI ++ F +++ ++ GM H+++K
Sbjct: 267 TVSRWFIGLEFQKPEGTK-NVKVDITAEIQYFTSTVHKQACQIAIFREGMRTEARHVKKK 325
Query: 300 QIPPYVFPEGYKRTRHPRLASQQRSSENG 328
Q+ Y+ P R + ++SS NG
Sbjct: 326 QLSNYL-PNTVLRLK-------KKSSLNG 346
>gi|116283528|gb|AAH16738.1| PAPOLG protein [Homo sapiens]
Length = 496
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/302 (44%), Positives = 184/302 (60%), Gaps = 8/302 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILYLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 242 PCAH----CAFFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HI 296
H+
Sbjct: 486 HV 487
>gi|402890991|ref|XP_003908748.1| PREDICTED: poly(A) polymerase gamma [Papio anubis]
Length = 700
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/304 (43%), Positives = 185/304 (60%), Gaps = 8/304 (2%)
Query: 18 CRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNA 77
CRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV+WA+LVAR CQLYPNA
Sbjct: 167 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 226
Query: 78 VPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCM 137
S LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPIITPAYP
Sbjct: 227 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 286
Query: 138 NSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAAN 197
NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+
Sbjct: 287 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 346
Query: 198 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----CAFFMGL- 252
++ L W G VES++R L +ER+ + L H P + + +F+G+
Sbjct: 347 EENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGII 405
Query: 253 --QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 310
+ + E V +DI+ + N K GM+I +H+++KQ+ Y+ E
Sbjct: 406 FRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEIL 465
Query: 311 KRTR 314
++ +
Sbjct: 466 QKKK 469
>gi|9453844|dbj|BAB03278.1| poly A polymerase [Drosophila melanogaster]
Length = 459
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 142/367 (38%), Positives = 202/367 (55%), Gaps = 45/367 (12%)
Query: 7 VDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 66
+D +VRSLNGCRV D+IL LVPN+E+F LR +K WAK+ G+YSN G+ GGV WA+L
Sbjct: 1 LDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAML 60
Query: 67 VARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH 126
VAR CQLYPNA + LV +FF V++ W+WPNPV+L D L F VWDPR N D+ H
Sbjct: 61 VARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHP 120
Query: 127 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYR 186
MPIITPAYP NS++NVS ST +V++ +F G I +E+ L + W LFE FF YR
Sbjct: 121 MPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYR 180
Query: 187 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYP-------- 233
+++ + + + ADD L W G VES++R L +ER+ + L +C +
Sbjct: 181 HFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQSANNS 240
Query: 234 ---------------HEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLS 278
++ TS P +F+GL+ + E + D+ S++ F
Sbjct: 241 QNNSGNEDDLKQSQGNQSAVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQNFTEH 295
Query: 279 INMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTG 334
+ M+ K GM I H++RKQ+ Y+ + KR R +S E+ N +
Sbjct: 296 VMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRER--------KSMESHNNFNNT 347
Query: 335 SGLKRKK 341
RK+
Sbjct: 348 LLANRKR 354
>gi|198433414|ref|XP_002124981.1| PREDICTED: similar to Poly(A) polymerase gamma (PAP-gamma)
(Polynucleotide adenylyltransferase gamma) (SRP RNA
3-adenylating enzyme) (Neo-poly(A) polymerase) (Neo-PAP)
[Ciona intestinalis]
Length = 833
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 134/319 (42%), Positives = 192/319 (60%), Gaps = 9/319 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN+E+F TLR +K WAKR+G+YSN+ G+LGGV
Sbjct: 176 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRVIKLWAKRKGIYSNMLGYLGGV 235
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-LGFSVWDPRKNR 120
+WA+LVAR CQLYPNA+ S LV RFF V++ W WP PV+L +E+ L VWDPR N
Sbjct: 236 SWAMLVARTCQLYPNAIASTLVQRFFWVFSQWEWPRPVLLKQPEESNTLNLPVWDPRYNP 295
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
D+ H MPIITPAYP NS+YNV+ S+L VM +F G + E+ NK+ W L E
Sbjct: 296 SDRLHLMPIITPAYPQQNSTYNVTRSSLTVMKGEFIDGYRVTAEIHENKSSWLKLLETPN 355
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTY---GKLQCHPYPHEYV 237
FF Y++++ + A + ++ W G VES++R L +ER+ Y + YP E
Sbjct: 356 FFNEYKHFIVLMASAESQENFNLWTGLVESKIRILVGYLERNDYILIAHINQTGYPQEVK 415
Query: 238 DTSKPCAHC-AFFMGLQRKPGEVVQEGQQF--DIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ A+ +F+GL R +++ DI+ + + +K GM++ +
Sbjct: 416 EKDVTTAYVNRWFLGL-RFVKDLISTNINLTHDIQAFTDTLHRQAHNSKVFKEGMKVEAT 474
Query: 295 HIRRKQIPPYVFPEGYKRT 313
+ RR Q+P Y+ PE T
Sbjct: 475 YSRRSQLPKYL-PESIAAT 492
>gi|409079597|gb|EKM79958.1| hypothetical protein AGABI1DRAFT_113202 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 615
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 142/382 (37%), Positives = 206/382 (53%), Gaps = 43/382 (11%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++DE +RSL G RV D +L+LVP+V+ F +LRC+K WA+RR +YSNV GFLGGV WA+
Sbjct: 182 NMDERCIRSLGGSRVTDAMLRLVPDVQVFRDSLRCIKLWARRRAIYSNVNGFLGGVAWAM 241
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR+CQLYPNA +VSRFF + W WP PV+L I++ L VW+P+ D++H
Sbjct: 242 LVARICQLYPNATAGAIVSRFFIIMYQWCWPQPVLLKQIEDGPLQVRVWNPKLYPSDRSH 301
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP M +++NV+ ST +M ++F+ G I ++V + A WS LF + FF Y
Sbjct: 302 RMPIITPAYPAMCATHNVTESTQMIMTEEFKKGADIVDKVIVGSASWSDLFAKHDFFHKY 361
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH----------- 234
R YLQV N+D + W G VESR+RQL + +E L HP+
Sbjct: 362 RYYLQVIASTGNSDLQIKWAGTVESRIRQLIMKLEYVESLTL-AHPFIKGFDQVAYCLNE 420
Query: 235 -----------------------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFDIRG 270
E + + P F++GL +P + G ++ DI
Sbjct: 421 EEVRAIAQGETSPAIAARKKEDVEGKEGAGPVYSTTFYIGLMIEPKQPGSSGPRRLDISY 480
Query: 271 SVEEFKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGN 329
EF + ++ + + M + V HIR +P YVF G + P +Q+R+ G
Sbjct: 481 PTIEFTKQVKLWEKYDESTMGLIVRHIRSSSLPDYVFDPGER----PPKVTQKRTKGPGK 536
Query: 330 EYQTGSGL--KRKKDPESVDQD 349
+ T + KR++ +SV D
Sbjct: 537 THNTSPDMPNKRQRSSQSVTTD 558
>gi|443716054|gb|ELU07731.1| hypothetical protein CAPTEDRAFT_223399 [Capitella teleta]
Length = 657
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 132/301 (43%), Positives = 188/301 (62%), Gaps = 12/301 (3%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN+E F TLR +K WAK++G+YSN GFLGGV
Sbjct: 187 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIESFRMTLRAVKLWAKKKGIYSNALGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-DEAELGFSVWDPRKNR 120
+WA+LVAR CQLYP+A P+ L+ +FF +++ W WP PV+L + DE +L +VWDPR N
Sbjct: 247 SWAMLVARTCQLYPHACPATLLQKFFMLFSKWDWPAPVLLKQMSDENKLSHTVWDPRVNV 306
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
D+ H MPIITPAYP NS+YNVS ST ++MMD+F+ + V NK +W +LF+P
Sbjct: 307 SDRFHLMPIITPAYPQQNSTYNVSNSTRQIMMDEFKEALVVANNVYANKDEWGSLFQPSD 366
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY---V 237
FF+ Y++Y+ + + D L W G VES++R L +E++ + + H P +
Sbjct: 367 FFQKYKHYIVLVARSDTEDHQLEWVGLVESKIRILVGNLEKNPFICI-AHVNPKSFGPNE 425
Query: 238 DTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF---KLSINMYMFWKPGMEICVS 294
D P +F+GL K G +DI+ ++ L+IN+ K GME+ V
Sbjct: 426 DDESPYI-AKWFVGLIFKTGTQTNIDLTYDIQNFMDIVYRQALTINLL---KKGMEVEVK 481
Query: 295 H 295
H
Sbjct: 482 H 482
>gi|426192448|gb|EKV42384.1| hypothetical protein AGABI2DRAFT_195729 [Agaricus bisporus var.
bisporus H97]
Length = 615
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/382 (37%), Positives = 206/382 (53%), Gaps = 43/382 (11%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++DE +RSL G RV D +L+LVP+V+ F +LRC+K WA+RR +YSNV GFLGGV WA+
Sbjct: 182 NMDERCIRSLGGSRVTDAMLRLVPDVQVFRDSLRCIKLWARRRAIYSNVNGFLGGVAWAM 241
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR+CQLYPNA +VSRFF + W WP PV+L I++ L VW+P+ D++H
Sbjct: 242 LVARICQLYPNATAGAIVSRFFIIMYQWCWPQPVLLKQIEDGPLQVRVWNPKLYPSDRSH 301
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP M +++NV+ ST +M ++F+ G I ++V + A WS LF + FF Y
Sbjct: 302 RMPIITPAYPAMCATHNVTESTQMIMTEEFKKGADIVDKVIVGSASWSDLFAKHDFFHKY 361
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH----------- 234
R YLQV N+D + W G VESR+RQL + +E L HP+
Sbjct: 362 RYYLQVIASTGNSDLQIKWAGTVESRIRQLIMKLEYVESLTL-AHPFIKGFDQVAYCLNE 420
Query: 235 -----------------------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFDIRG 270
E + + P F++GL +P + G ++ DI
Sbjct: 421 EEVRAIAQGETSPAIAARKKEDVEGKEGAGPVYSTTFYIGLMIEPKQPGSSGPRRLDISY 480
Query: 271 SVEEFKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGN 329
EF + ++ + + M + V HIR +P YVF G + P +Q+R+ G
Sbjct: 481 PTIEFTKQVKLWEKYDESTMGLIVRHIRSSSLPDYVFDPGER----PPKVTQKRTKGPGK 536
Query: 330 EYQTGSGL--KRKKDPESVDQD 349
+ T + KR++ +SV D
Sbjct: 537 THNTSPDMPNKRQRSSQSVTTD 558
>gi|62822283|gb|AAY14832.1| unknown [Homo sapiens]
Length = 465
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/235 (52%), Positives = 160/235 (68%), Gaps = 1/235 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSF 420
>gi|26335223|dbj|BAC31312.1| unnamed protein product [Mus musculus]
gi|74224037|dbj|BAE23879.1| unnamed protein product [Mus musculus]
Length = 429
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/235 (52%), Positives = 160/235 (68%), Gaps = 1/235 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
F+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSF 420
>gi|17536297|ref|NP_496067.1| Protein T15H9.6 [Caenorhabditis elegans]
gi|3879808|emb|CAA87419.1| Protein T15H9.6 [Caenorhabditis elegans]
Length = 554
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 119/284 (41%), Positives = 183/284 (64%), Gaps = 12/284 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++DE +VRSLNGCRVA+Q+LKLVP+ ++FC TLR +K WAK G+YSN GF GG+
Sbjct: 181 SLLKNLDEESVRSLNGCRVAEQLLKLVPHQKNFCITLRAIKLWAKNHGIYSNSMGFFGGI 240
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDP 116
WA+LVAR+CQLYPNA PS L+ + F +++ W WP PV+L I D A+L VWDP
Sbjct: 241 TWAILVARICQLYPNAAPSRLIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDP 300
Query: 117 RKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF 176
R+N D+ H MPIITPA+P NS++NVS S+++V+ D+ + IC+++ +W L
Sbjct: 301 RRNHADRYHLMPIITPAFPQQNSTHNVSRSSMKVIQDEMKKALIICDKIHEGTLEWRDLL 360
Query: 177 EPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
E FF Y +++ + + A + + LA+ G+ ESR+RQL ++E++ ++ P ++
Sbjct: 361 EEINFFSKYHHFIALKLKAESVKEELAFGGFFESRIRQLVQILEKNQVIQV-AQINPRKF 419
Query: 237 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 280
D P +F+GL E V + D+ +++FK++I+
Sbjct: 420 KDVKDP-KKSIWFIGL-----EFVANVKNVDLTSDIQQFKMNID 457
>gi|389744511|gb|EIM85694.1| poly-A polymerase [Stereum hirsutum FP-91666 SS1]
Length = 628
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 147/372 (39%), Positives = 201/372 (54%), Gaps = 42/372 (11%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D+ +RSL G RV D+IL+LVPNV F +LRC+K WA+RR +YSNV GFLGGV
Sbjct: 176 NLLRNLDDRCIRSLGGSRVTDEILRLVPNVNVFRDSLRCIKLWAQRRAIYSNVNGFLGGV 235
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA+ +VSRFF + W WP PV+L I+E L VW+P+
Sbjct: 236 AWAMLVARICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPG 295
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MPIITPAYP M +++NV+ ST +M ++F+ G I ++V + A WS LF + F
Sbjct: 296 DRSHRMPIITPAYPAMCATHNVTASTQMIMTEEFKKGADIVDKVIVGTATWSELFAKHDF 355
Query: 182 FESYRNYLQVDIVAANADDLL--AWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 239
F YR YLQ I+A+ D L W G VESRLRQL + +E +L HP+ +
Sbjct: 356 FHKYRYYLQ--IIASTGDPALQIKWAGTVESRLRQLVMKLEFVESLQL-AHPFIKGFEQI 412
Query: 240 SKPCAHCAFFMGLQRKPGEVVQEGQQFDIR------------------------GSVEEF 275
S + Q + E V + ++ DI GSV
Sbjct: 413 SYCLSEEEMRAVAQGEVSEAVAQRKKEDIEGKEGASQVYTSTFYIGLAIEARQAGSVGPR 472
Query: 276 KLSIN--------MYMFW----KPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQR 323
KL I+ M W + M I V HI+ +P YVF G +R P L ++
Sbjct: 473 KLDISWPTTEFTKMVKSWDKFDETKMGIIVRHIKSSTLPDYVFDAG-ERQPKPALTKKRP 531
Query: 324 SSENGNEYQTGS 335
S G GS
Sbjct: 532 KSVKGTTRPNGS 543
>gi|345492821|ref|XP_001602912.2| PREDICTED: poly(A) polymerase gamma-like [Nasonia vitripennis]
Length = 605
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 136/380 (35%), Positives = 206/380 (54%), Gaps = 46/380 (12%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D+ VRSLNGCRV D+IL+LVPN+E+F LR +K WAK+ G+YSNV G+LGGV+
Sbjct: 194 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKKNGIYSNVLGYLGGVS 253
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQLYPNAV + L+ +FF V++ W+WP PV+L + + LGF VWDPR D
Sbjct: 254 WAMLVARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKSPENVNLGFQVWDPRVTMSD 313
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+T +M + F+ G I EE+ + KA W LFEP FF
Sbjct: 314 RT-------------------------IMQEAFETGLAITEEIIMGKASWDKLFEPPNFF 348
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERD---TYGKLQCHPYPHEYVDT 239
YR+Y+ + ++ A+D L W G VES++R L +ER+ T + +P +
Sbjct: 349 GKYRHYIVLLASSSTAEDQLEWCGLVESKIRHLIGTLERNPNITLAHINPESFPPLKPEA 408
Query: 240 SKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRK 299
K + +F+GL K GE + DI+ VE + +K GM I H++RK
Sbjct: 409 GKHVS--MWFIGLTFKKGENLNIDLTMDIKSFVETTERQAEQIKLFKNGMTIEAKHVKRK 466
Query: 300 QIPPYVFPEGYKRTRHPRLASQQRSSENGN-----EYQTGSGLKRKKDPESVDQDGPEKR 354
+ Y+ KR R ++Q+ + +GN Q L+++K +S++ + +++
Sbjct: 467 DLSNYIAANQIKRERKTSSSTQRNGNSSGNGGVSPRNQGDQTLRKRKSDQSLESNDKKRK 526
Query: 355 -----------QSISPQKQD 363
QS + QK+D
Sbjct: 527 IQDSEQQHQHPQSTTQQKED 546
>gi|156342919|ref|XP_001620975.1| hypothetical protein NEMVEDRAFT_v1g176602 [Nematostella vectensis]
gi|156206500|gb|EDO28875.1| predicted protein [Nematostella vectensis]
Length = 485
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 178/298 (59%), Gaps = 6/298 (2%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D VRSLNGCRV D+IL+ VPN+E F TL +K WAK+ GVYSNV GFLGGV+WA+
Sbjct: 186 NLDPKCVRSLNGCRVTDEILRQVPNIESFRLTLNAVKLWAKKHGVYSNVLGFLGGVSWAM 245
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI---DEAELGFSVWDPRKNRRD 122
LVAR CQLYPNA S L+ +FF V++ W WPNPV+L I E +LGF WDPR N D
Sbjct: 246 LVARTCQLYPNAAASTLLQKFFLVFSRWEWPNPVLLKNIPTPSENKLGFKNWDPRTNPGD 305
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS++NVS ST ++M D+F G E+V KA W LF P FF
Sbjct: 306 RYHLMPIITPAYPQQNSTFNVSMSTRKIMCDEFFIGLKNTEDVISGKANWDRLFTPPNFF 365
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY--VDTS 240
YR+Y+ + + ++ L W G VES++R L +E + Y KL H P Y +D+
Sbjct: 366 HKYRHYIVLSASSNTEEEHLEWIGLVESKVRLLISYLENNEYIKL-AHVNPKSYGPLDSE 424
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRR 298
+F+GL + E V ++I+ + M +K GM H+RR
Sbjct: 425 GEKHVTRWFIGLMFEKLENVNINLTYEIQMFKNKVHAQAVKIMMFKEGMVTEAKHVRR 482
>gi|255085208|ref|XP_002505035.1| predicted protein [Micromonas sp. RCC299]
gi|226520304|gb|ACO66293.1| predicted protein [Micromonas sp. RCC299]
Length = 404
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 156/219 (71%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D+ +V+SLNGCRVADQ+L+LVPN + F LR L+ WAK RGVYSNV G+ GGV
Sbjct: 163 TILQNLDDASVKSLNGCRVADQLLRLVPNHDAFRIALRALRVWAKERGVYSNVLGYFGGV 222
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
N ALLVARVCQLYPNA PSMLV FF+++ W+W PVML I + G VWD R N+
Sbjct: 223 NLALLVARVCQLYPNAAPSMLVYSFFQLWDAWQWSTPVMLTPIVDEGHGLRVWDERVNKA 282
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
++ M IITPAYP NS++NV+ STL V+ ++F+ G +C EV ++K +W +L+EP F
Sbjct: 283 ERFQLMKIITPAYPAQNSTFNVTHSTLHVLKNEFKRGREVCAEVLMSKKRWESLWEPLPF 342
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE 220
F +++YLQV I A + DD W+GWV SRLR L +E
Sbjct: 343 FTMHKHYLQVTIAAVSEDDFKKWEGWVHSRLRMLVQGVE 381
>gi|115530785|emb|CAL49411.1| poly(A) polymerase alpha (pap) [Xenopus (Silurana) tropicalis]
Length = 474
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/289 (45%), Positives = 179/289 (61%), Gaps = 13/289 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 189 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 248
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 249 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 308
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L KA+WS LF+ FF+ Y
Sbjct: 309 LMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLGKAEWSKLFDAPNFFQKY 368
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E +T
Sbjct: 369 KHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPSE--NTE 426
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMF 284
K + +GL K E E D+ ++ F + +IN MF
Sbjct: 427 KEEFRTMWVIGLVFKKME-NSENLSVDLTYDIQSFTDTVYRQAINSKMF 474
>gi|170090568|ref|XP_001876506.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647999|gb|EDR12242.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 600
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/359 (38%), Positives = 194/359 (54%), Gaps = 42/359 (11%)
Query: 2 SVLNDVDEPTVRSL--NGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLG 59
++L ++DE VRSL G RV D+IL+LVPNV+ F LRC+K WA+RR +YSNV GFLG
Sbjct: 194 NLLRNLDERCVRSLGATGSRVIDEILRLVPNVQVFRDALRCIKLWAQRRAIYSNVNGFLG 253
Query: 60 GVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKN 119
GV WALLVAR+CQLYPNA+ +VSRFF + W WP PV+L I++ L VW+P+
Sbjct: 254 GVAWALLVARICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLQVRVWNPKLY 313
Query: 120 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 179
D++H MPIITPAYP M S++NV+ ST +M ++F+ G I ++V + A WS LF +
Sbjct: 314 PADRSHRMPIITPAYPAMCSTHNVTASTQIIMTEEFKRGADIVDKVIVGSATWSELFAKH 373
Query: 180 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 239
FF YR YLQV NAD + W G VESR+RQL + +E + HP+ +
Sbjct: 374 DFFHKYRYYLQVIASTGNADLQIKWSGTVESRIRQLVMKLEY-VDSLILAHPFIRGFEQV 432
Query: 240 S----------------------------------KPCAHCAFFMGLQRKPGEVVQEG-Q 264
S P F++GL +P G +
Sbjct: 433 SYCLSEDEVRAVAEGEISDSVAGRKKEDIEGKEGAGPVYSTTFYIGLAIEPKPTGATGPR 492
Query: 265 QFDIRGSVEEFKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ 322
+ DI +F + M+ + + M I V HI+ +P VF G R P+L ++
Sbjct: 493 RLDISYPTTDFTKLVKMWEKYDEATMGIVVRHIKSSGLPDNVFEPG---ERPPKLVQKR 548
>gi|393246171|gb|EJD53680.1| polymerase [Auricularia delicata TFB-10046 SS5]
Length = 610
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/423 (35%), Positives = 214/423 (50%), Gaps = 44/423 (10%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++DE VRSL G R+ D+IL+LVPN F LRC+K WA+RR +YSNV GFLGGV
Sbjct: 180 ILRNLDERCVRSLGGSRMTDEILRLVPNQAVFRDALRCIKLWAQRRAIYSNVNGFLGGVA 239
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR+CQLYPNA ++VSRFF + W+WPNPV+L I+E L VW+P+ D
Sbjct: 240 WAMLVARICQLYPNANAGVIVSRFFIIMREWKWPNPVLLKQIEEGPLQVRVWNPKLYPSD 299
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITP YP M S++NVS ST ++ + + + I + + + A WS LF + FF
Sbjct: 300 RAHRMPIITPNYPSMCSTHNVSQSTQMIIKHELRRASEIVDRIIMGSATWSELFAKHDFF 359
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH-------- 234
YR YLQV NAD L W G VESRLRQL + +E + HP+
Sbjct: 360 HKYRYYLQVIASTENADLQLKWAGTVESRLRQLVMKLEY-VDSLVLAHPFIKGFDQTHYL 418
Query: 235 --------------------------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFD 267
E D ++ F++GL +P + G ++ D
Sbjct: 419 LTEEEVRFVAQGFVSDVISKRTKEDIEGKDGAQIVYTTTFYIGLAIEPKQPGAVGPRKLD 478
Query: 268 IRGSVEEFKLSINMYM-FWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSE 326
I EF + M+ F M I V HI+ +P YVF ++ + +L + S
Sbjct: 479 ISYPTAEFTKLVKMWENFDDSKMGIVVRHIKSTMLPDYVFDPSERQPKQ-QLKRTKSSKS 537
Query: 327 NGNEYQTGSGLKRKKDPESVDQ-DGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEP 385
N + KK S++ + P ++S +L P LA + S + S P
Sbjct: 538 TSNNADASPDMPNKKRRSSLNMSETPRSESALS-----ALPPSPLADLNATSRSPSVKSP 592
Query: 386 VIP 388
+ P
Sbjct: 593 INP 595
>gi|299748265|ref|XP_001837569.2| polymerase [Coprinopsis cinerea okayama7#130]
gi|298407893|gb|EAU84193.2| polymerase [Coprinopsis cinerea okayama7#130]
Length = 595
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 148/422 (35%), Positives = 212/422 (50%), Gaps = 63/422 (14%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE VRSL G R ++IL+LVPNV+ F LRC+K WA+RR +YSNV GFLGGV
Sbjct: 180 NLLRNLDERCVRSLGGSRQVNEILRLVPNVDVFRDALRCIKLWAQRRAIYSNVNGFLGGV 239
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WALLVAR+CQLYPNA+ +VSRFF + W WP PV+L I++ L VW+P+
Sbjct: 240 AWALLVARICQLYPNALAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLQVRVWNPKLYPA 299
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP M S++NV+ ST +M ++F+ G I + V + AQWS LF + F
Sbjct: 300 DRAHRMPIITPAYPSMCSTHNVTASTQMIMTEEFKRGADIVDRVIVGTAQWSELFAKHDF 359
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH------- 234
F YR YLQ+ + D W G VESR+RQL + +E + HP+
Sbjct: 360 FHKYRYYLQIIASTGDPDLQNKWSGTVESRIRQLVMKLEY-VESLILAHPFIKGFDQVSY 418
Query: 235 ---------------------------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQF 266
E + S+ F++GL +P G ++
Sbjct: 419 CLNEDEVKAVVQGEISEAIASRKKEDIEGKEGSQTVYTTTFYIGLAIQPKPAGAVGPRRL 478
Query: 267 DIRGSVEEFKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
DI ++F + M+ + + M I V HI+ +P VF G + P +Q+R
Sbjct: 479 DISYPTQDFSKLVKMWDKYDESKMGIIVRHIKSSALPDNVFDPGER----PAKVTQKRV- 533
Query: 326 ENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEP 385
K ++ + P KRQ S D++ P +GT + P
Sbjct: 534 --------------KGKSSNISSEQPNKRQRSSTSVADTIRP-------TENGTSTGTTP 572
Query: 386 VI 387
V+
Sbjct: 573 VV 574
>gi|312067061|ref|XP_003136565.1| hypothetical protein LOAG_00977 [Loa loa]
gi|307768265|gb|EFO27499.1| hypothetical protein LOAG_00977 [Loa loa]
Length = 859
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 135/344 (39%), Positives = 199/344 (57%), Gaps = 28/344 (8%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++DE +VRSLNGCRVAD+IL+LVPNV +F LR +K WAK G+YSNV G+LGGV
Sbjct: 321 SILRNLDEKSVRSLNGCRVADEILRLVPNVSNFTYALRAIKLWAKNHGIYSNVLGYLGGV 380
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVML------CAIDEAELGFSVWD 115
+WA+LVAR CQLYPN P+ LV +FF +YT W WP+PV+L A D L VWD
Sbjct: 381 SWAILVARTCQLYPNTGPARLVQKFFLLYTKWEWPHPVVLKETEVSHARDMPALQELVWD 440
Query: 116 PRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSAL 175
PR D+ H MPI+TPA+P NS++NV+ S+L+++M++ + G ++ KA+WSAL
Sbjct: 441 PRSRSGDRFHLMPIVTPAFPQQNSTFNVTKSSLKIIMNEIEEGLVTINDIMKGKAEWSAL 500
Query: 176 FEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHE 235
FE FF Y+++L + ++A D L W G VES++R L +ER ++ CH +
Sbjct: 501 FEEVNFFSRYKHFLALLCLSATEQDELVWCGLVESKIRFLIASLERRESIRV-CHVHTKY 559
Query: 236 Y--------VDTSKPCAHCAF-FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM--- 283
Y V S C F+GL ++ DI+ V+ F +N
Sbjct: 560 YQPRNDPLPVQVSLQNPRCRLWFIGLDLNK----TVSRKIDIQHEVQSFMDLLNSMATTQ 615
Query: 284 -FWKPGMEICVSHIRRKQIPPYV----FPEGYKRTRHPRLASQQ 322
+ GM + ++R+ ++ ++ +G K + R+A+ Q
Sbjct: 616 NIYVEGMSVIPHYLRKAELVKWLKMEDLTKGRKAPKRRRIAASQ 659
>gi|384497599|gb|EIE88090.1| hypothetical protein RO3G_12801 [Rhizopus delemar RA 99-880]
Length = 500
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 180/281 (64%), Gaps = 12/281 (4%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D ++RS+NG RVAD IL LVPN++ F TLRC+K WA R+ VYSNV GFLGGV
Sbjct: 154 ILRGLDAHSIRSINGTRVADDILSLVPNMDTFRATLRCIKLWATRKAVYSNVLGFLGGVA 213
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE--AELGFSVWDPRKNR 120
WA+LVARVCQLYP+A S L+S+FF + T W WP+PVML A+++ A W+P+ N
Sbjct: 214 WAILVARVCQLYPHASASTLISKFFHILTSWSWPSPVMLKAVEDGPAFANTKPWNPKLNP 273
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
D++H MP+ITP+YP M +++NV+ ST R++ + + I +++ A+W LFE +
Sbjct: 274 TDRSHRMPVITPSYPSMCTTHNVTQSTQRIITGEIKQAAKIVDKIMAGSAKWPQLFEAHS 333
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
FF+ YR YLQ+ +VA N + L W G VE+RLRQL + +E + +Q HP+ + +T
Sbjct: 334 FFKMYRQYLQITVVADNYELQLKWTGLVEARLRQLVIKLEA-IHSVMQVHPFMDGFSET- 391
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINM 281
C + + V +G+++D ++ + K+ +++
Sbjct: 392 -----CLYRTSTDKV---TVSQGEKYDNNRTIGKMKMEVDV 424
>gi|17533995|ref|NP_496524.1| Protein F43G6.5 [Caenorhabditis elegans]
gi|5832750|emb|CAA90398.2| Protein F43G6.5 [Caenorhabditis elegans]
Length = 554
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/280 (41%), Positives = 178/280 (63%), Gaps = 12/280 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D+ +VRSLNGCRVA+ +LKLVPN E+FC TLR +K WAK G+YSN GF GG+ WA+
Sbjct: 190 NLDQESVRSLNGCRVAENLLKLVPNQENFCITLRAIKLWAKNHGIYSNSMGFFGGITWAI 249
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDPRKNR 120
LVAR CQLYPNA PS L+ + F +++ W+WP PV+L I D A+L VWDPR+N+
Sbjct: 250 LVARACQLYPNASPSKLIQKVFFIFSTWKWPAPVLLDFISSDRMDLAQLNQLVWDPRRNQ 309
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
D+ H MPI+TPA+P NS++NVS S+++V+ ++ + C+ ++ W L E
Sbjct: 310 SDRYHLMPIVTPAFPQQNSTHNVSRSSMKVIQEEMKDALITCDNIQNGSCNWMDLLEEIN 369
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
FF Y++++ + + A D LA+ G+ ESR+RQL L++E++ KL H P ++
Sbjct: 370 FFSRYKHFISLSMTAETEKDELAFGGFFESRIRQLVLILEKNQGIKL-AHINPKKFKAAK 428
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 280
P +F+GLQ + + D+ +++FK +I+
Sbjct: 429 DP-KKSVWFIGLQFD-----ENVKNLDLTKDIQQFKRNID 462
>gi|320165027|gb|EFW41926.1| poly(A) polymerase [Capsaspora owczarzaki ATCC 30864]
Length = 698
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/331 (40%), Positives = 190/331 (57%), Gaps = 20/331 (6%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L + D TVRS+NG RVA+ IL+LVP+ ++F LR +K WA RGVYSN GFLGG+
Sbjct: 236 AILRNCDMATVRSVNGSRVANYILQLVPDRDNFRMALRAIKLWANNRGVYSNKLGFLGGI 295
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-AELGFSVWDPRKNR 120
WA+LVAR CQLYP + S +V+RFFRV+ W WP PV L A++E L W+P N
Sbjct: 296 AWAILVARTCQLYPKSSASTIVARFFRVFHNWSWPTPVWLKAMEEDRSLALPNWNPVINA 355
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
D H MPIITPAYP MNS++NVS STLRVM ++F G + ++E+ K W LFE
Sbjct: 356 SDARHLMPIITPAYPSMNSTHNVSMSTLRVMTEEFARGMQVTLDIEVGKVGWPVLFEKNN 415
Query: 181 FFESYRNYLQVDI-VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY--- 236
FF Y+ Y+Q+ N D+ W+G+VES+LR +E G HPYP +
Sbjct: 416 FFTRYKTYIQISARTEENQDEHRQWEGFVESKLRMFLQWLE-SAPGVDYVHPYPKTFSQT 474
Query: 237 --VDTSKPCAHCAFFMGLQRKPGEVVQEGQQ---FDIRGSVEEFKLSI---NMYMFWKPG 288
++ +P F+ G+ K QEG ++ V +F+ +I N P
Sbjct: 475 DTTESGQPVYLTIFYFGMMFKK----QEGTDPRVIELGNIVRDFREAIKNQNASFVNNPR 530
Query: 289 MEICVSHIRRKQIPPYVFPEGYK--RTRHPR 317
+++ V ++R Q+P VF G + T+ P+
Sbjct: 531 VDLVVLPMKRPQLPENVFEGGVRPAPTKRPK 561
>gi|328853642|gb|EGG02779.1| hypothetical protein MELLADRAFT_38417 [Melampsora larici-populina
98AG31]
Length = 529
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 137/343 (39%), Positives = 190/343 (55%), Gaps = 39/343 (11%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D+ VRSL G RV D+IL+LVP+VE F +LR +K WAK R VYSNV GF GGV
Sbjct: 171 ALLKNLDDRCVRSLGGSRVTDEILRLVPDVEVFRHSLRAIKLWAKNRAVYSNVMGFCGGV 230
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELG--FSVWDPRKN 119
WA+ ARVCQLYPN + +V+RFF V + W WP+PV+L AI +G VW+P+
Sbjct: 231 AWAMCTARVCQLYPNKPAATIVNRFFAVLSQWNWPSPVLLKAIGSGPIGDQRRVWNPKIY 290
Query: 120 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 179
+D+ H MPIITPAYPCM S++NV+ ST +VMM +F+ G + + + AQWSALFE +
Sbjct: 291 PQDRGHRMPIITPAYPCMCSTHNVTKSTAQVMMTEFKRGLAVTDAIATGSAQWSALFEKH 350
Query: 180 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 239
FF YRNY+Q+ + AD L W G VESRLR L L +E + HP+ + +T
Sbjct: 351 DFFTRYRNYIQITASSPEADAHLKWAGTVESRLRLLVLKVEEIETVDM-AHPFIKGFSNT 409
Query: 240 S----------------------------------KPCAHCAFFMGLQRKPGEVVQEG-Q 264
+ + C+FF+GL P V G +
Sbjct: 410 TYALNRQEVSLVQGGDMPNEIASRIPEDYENRADVEVVHTCSFFVGLLVHPKPVGHVGPR 469
Query: 265 QFDIRGSVEEFKLSINMYM-FWKPGMEICVSHIRRKQIPPYVF 306
+ DI V EF + + + + M I V HI++ P +
Sbjct: 470 KLDITYPVGEFTRMVKQWEGYSEDKMSISVRHIKKSVYPSFFL 512
>gi|170593997|ref|XP_001901750.1| Poly polymerase central domain containing protein [Brugia malayi]
gi|158590694|gb|EDP29309.1| Poly polymerase central domain containing protein [Brugia malayi]
Length = 842
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 134/350 (38%), Positives = 198/350 (56%), Gaps = 28/350 (8%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++DE +VRSLNGCRVAD+IL+LVPN+ +F LR +K WAK G+YSNV G+LGGV
Sbjct: 317 SILRNLDEKSVRSLNGCRVADEILRLVPNISNFTYALRAIKLWAKNHGIYSNVLGYLGGV 376
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLC------AIDEAELGFSVWD 115
+WA+LVAR CQLYPN P+ LV +FF +YT W WP+PV+L A D L VWD
Sbjct: 377 SWAILVARTCQLYPNTGPARLVQKFFLLYTKWEWPHPVVLKETEISHARDMPSLQELVWD 436
Query: 116 PRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSAL 175
PR D+ H MPI+TPA+P NS++NV+ S+L+++M++ + G ++ K WSAL
Sbjct: 437 PRSRSGDRFHLMPIVTPAFPQQNSTFNVTKSSLKIIMNEIEEGLVTINDIMKGKTGWSAL 496
Query: 176 FEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHE 235
FE FF Y+++L + ++A D L W G VES++R L +ER ++ CH +
Sbjct: 497 FEEVNFFSRYKHFLALLCLSATEQDELVWCGLVESKIRFLIASLERRESIRV-CHVHTKY 555
Query: 236 Y--------VDTSKPCAHC-AFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM--- 283
Y V S C +F+GL ++ DI+ V+ F +N
Sbjct: 556 YQPRNDPFPVQVSLQNPRCRLWFIGLDLNKT----VSRKIDIQHEVQSFMDLLNSMATTQ 611
Query: 284 -FWKPGMEICVSHIRRKQIPPYV----FPEGYKRTRHPRLASQQRSSENG 328
+ GM + ++R+ ++ ++ G K + R+A+ Q G
Sbjct: 612 NIYVEGMSVIPHYLRKAELVKWLKMEDLTRGKKAPKRRRIATSQNQQATG 661
>gi|294460282|gb|ADE75723.1| unknown [Picea sitchensis]
Length = 554
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 126/308 (40%), Positives = 185/308 (60%), Gaps = 24/308 (7%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D+ TV+SLNGCRV +IL+LVP +E+F +TLRC+KFWAKRRG+YS++ GFLGG++
Sbjct: 211 LLENLDDTTVKSLNGCRVTARILQLVPKIENFRSTLRCIKFWAKRRGIYSHIFGFLGGIH 270
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQ++PNA SMLVSRFF +Y W+WP PV L S D
Sbjct: 271 WAVLVARVCQMFPNATVSMLVSRFFWIYAHWQWPTPVTLVETQPDHADGS---------D 321
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVEL------NKAQWSALF 176
+ HHMPII P +P SYNV+ STL+ + +F G ++E N W+ LF
Sbjct: 322 RHHHMPIIIPVHPYSCCSYNVTRSTLQKLKSEFSRGWDAIMKMETKWGTLPNSGDWNILF 381
Query: 177 EPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
E + F SY ++Q+ + A++ DD +W+GWVESR R L L E+ C P P+ Y
Sbjct: 382 ERFPFCSSYEYFIQIYVTASDEDDFRSWRGWVESRFRHLLLKFEK---LPAYCDPNPYPY 438
Query: 237 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHI 296
D + HC F GL+ +++ D+ +EF+L ++ +PG ++ ++ +
Sbjct: 439 FDKNVKEPHCYFLWGLK------LRKNISVDMADLEDEFRLYLSNGYEGRPGCDVHLTLL 492
Query: 297 RRKQIPPY 304
R Q+P +
Sbjct: 493 NRFQLPSF 500
>gi|71023817|ref|XP_762138.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
gi|46101730|gb|EAK86963.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
Length = 667
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/391 (35%), Positives = 197/391 (50%), Gaps = 59/391 (15%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE VRSL G RV D IL+LVPN+ F LRC+K WA+RR +YSNV GFLGGV
Sbjct: 188 NLLRNLDERDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGV 247
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+L AR+CQLYPN +VSRFF + W+WP PV+L I++ L VW+P+
Sbjct: 248 AWAMLTARICQLYPNEAAGAIVSRFFIILYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPS 307
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP M +++NVS ST VM +F+ + + V + K W LF + F
Sbjct: 308 DRLHRMPIITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGKTNWDELFAKHDF 367
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQC-HPY-------- 232
F Y+ YLQV + +AD L W G VES++RQL + +E + C HP+
Sbjct: 368 FFKYKYYLQVIASSGSADLQLKWHGTVESKIRQLVMKLE--LVPTITCAHPFIKGFDQVS 425
Query: 233 ----------------PHEYVDTSKPCAH------------------------------C 246
P E ++ A
Sbjct: 426 ECWNDHEVRLVATGDIPEEVAQRTQKVAALPETDEAKQAAAEEAARVTEGKEGHRMIYTT 485
Query: 247 AFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMY-MFWKPGMEICVSHIRRKQIPPYV 305
F++GL +P + ++ DI EF + + + + M I V HI+ Q+P YV
Sbjct: 486 TFYIGLSIEPKLAGEGPRKLDISYPTAEFTGKVKQWEQYDEASMGIVVRHIKWTQLPGYV 545
Query: 306 FPEGYKRTRHPRLAS-QQRSSENGNEYQTGS 335
F G R ++ + +++GN+ + GS
Sbjct: 546 FEGGENRVSAAAVSKVNGKRAKSGNKKKNGS 576
>gi|358059327|dbj|GAA94903.1| hypothetical protein E5Q_01558 [Mixia osmundae IAM 14324]
Length = 618
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 185/339 (54%), Gaps = 35/339 (10%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE VRSLNG RV DQIL+LVPN+ F +LR +K+WAKRR VY+NV GF GGV
Sbjct: 175 NLLKQLDERDVRSLNGSRVTDQILRLVPNIPVFRDSLRAIKYWAKRRAVYANVVGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR+CQLYPN P ++SRFF ++ +W+WP PV+L + + L VW+P N
Sbjct: 235 SWAMLVARICQLYPNECPGGILSRFFHIFLLWQWPEPVLLTPLKQGPLNVRVWNPHVNSA 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M S++N+S S++ V+ +++ G I + + + W+ LFEP F
Sbjct: 295 DRMHKMPVITPAYPSMCSTHNISHSSMAVIKAEWERGENIVNRIAVGQTTWAELFEPTDF 354
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT-- 239
F YR YLQ+ + + D+ L W G VES+LR L +E G H Y E+ T
Sbjct: 355 FYKYRYYLQITASSQDMDNQLKWSGTVESKLRTLGANLE-GAEGVTLAHIYVDEFEKTYS 413
Query: 240 ------SKPCAHCA--------------------------FFMGLQRKPGEVVQEGQQFD 267
K A A F++GL G ++ D
Sbjct: 414 CKTEEEVKLVASGASTPEISARTEDDIKDVEGAVKLHTSNFYIGLSIDLGPKGSGSKKLD 473
Query: 268 IRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVF 306
+ EF + + + P M I V +++ +P +VF
Sbjct: 474 LSYPTCEFTKLVKRWEKYTPEMGITVRYMKNIALPDFVF 512
>gi|146180895|ref|XP_001021673.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|146144391|gb|EAS01427.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 1765
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 109/242 (45%), Positives = 165/242 (68%), Gaps = 11/242 (4%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKL--VPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
+L +DE + RS NGCRVA+ +++ + N E+F TL+C+K WA RG+YSN+ G+L G
Sbjct: 1281 MLLSMDERSYRSFNGCRVAEWLIRKDNIQNYENFKITLKCIKLWATNRGIYSNIIGYLSG 1340
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN-PVMLCAIDE----AELGFSVWD 115
+ W +LVA++CQLYPN P+ L+ RFF +Y+ W+W + PV + I E +L W
Sbjct: 1341 IGWTILVAKICQLYPNYPPNQLIERFFFLYSHWKWHDLPVYVEHIQEDVANTKLNADQWR 1400
Query: 116 PRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSAL 175
P R+ M IITP +PCMN+++NVS +TLR++ +Q QYGN I +++ N+ +S L
Sbjct: 1401 PEFRDRNS---MMIITPCFPCMNTAHNVSPTTLRIIQEQLQYGNRIINKIKKNEKTFSDL 1457
Query: 176 FEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPH 234
F+P+ FF+ Y+++LQ++IVA N +D + WKG VESRLR+LT + E+ + KL Q HPYP+
Sbjct: 1458 FKPFNFFKRYKHFLQINIVATNKNDHIVWKGHVESRLRKLTKLFEQSIHNKLIQVHPYPN 1517
Query: 235 EY 236
+
Sbjct: 1518 PF 1519
>gi|348506632|ref|XP_003440862.1| PREDICTED: poly(A) polymerase alpha-like [Oreochromis niloticus]
Length = 601
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 157/235 (66%), Gaps = 1/235 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S++ D+D VRS NG RV +QIL+LVPNV +F LR +K WAK+R +YSN GFLGGV
Sbjct: 173 SIVKDIDIRCVRSFNGYRVTEQILRLVPNVLNFRVALRAIKLWAKQRNIYSNKLGFLGGV 232
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA++VAR+CQ+YPNA S LV +FF++++MW WP P+ L +++ WDP+ N+
Sbjct: 233 SWAIMVARICQVYPNATTSTLVIKFFKIFSMWVWPIPIRLIEVEKCNYNLPFWDPKVNQS 292
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP N+S NVS STL ++ ++ G+ IC+E+E KA+WS LFE F
Sbjct: 293 DRCHLMPIITPAYPQQNTSVNVSRSTLAILNEEIHRGHAICQEIEQKKAKWSELFEQTDF 352
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
F+ Y++Y ++ + L W G VES++R L +ER+ L H +PH +
Sbjct: 353 FQKYQHYAVLEASYTTEEKCLEWVGLVESKIRLLVSTLERNELVSL-AHVHPHAF 406
>gi|308510522|ref|XP_003117444.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
gi|308242358|gb|EFO86310.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
Length = 513
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 132/348 (37%), Positives = 196/348 (56%), Gaps = 18/348 (5%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D +VRSLNGCRVA+Q+LK VPN FC TLR +K WAK G+YSN GF GG+
Sbjct: 159 NILKNLDPESVRSLNGCRVAEQLLKQVPNQSTFCETLRAVKLWAKNHGIYSNAIGFFGGI 218
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI----DEAELGFSVWDPR 117
WA+LVAR CQLYPNA PS L+ + F V++ W WP+PV+L + D L VWDPR
Sbjct: 219 AWAILVARTCQLYPNAAPSKLIQKVFFVFSTWNWPSPVILKHMENRFDMQNLSQLVWDPR 278
Query: 118 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 177
+N D+ H MPIITP++P NS++NVS STL+V+ ++ + ICE V+ KA W L E
Sbjct: 279 RNYADRLHLMPIITPSFPEQNSTHNVSRSTLQVIQNEMKEAFKICEHVQKGKATWKDLLE 338
Query: 178 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 237
FF YR+ + V I A + + G+ ESR+RQL ++ER++ ++Q
Sbjct: 339 ETNFFCKYRHLIAVSINAEKEKEDTDFAGFFESRIRQLVQLLERNS--QVQIAQVNTRKF 396
Query: 238 DTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG-MEICVSHI 296
+F+GL E +Q + D+ ++ FK I K G ++I +++
Sbjct: 397 KAPFSPGKSQWFIGL-----EFIQAAKNLDLTEEIKRFKKIIGNQAKEKIGTVQIDAAYV 451
Query: 297 RRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNE-----YQTGSGLKR 339
++ ++ Y+ KR + + EN N Q+G +K+
Sbjct: 452 KKSKLITYISAAELKRGKFMK-KDTSPEKENANRKRPTTTQSGDDVKK 498
>gi|156101143|ref|XP_001616265.1| poly(A) polymerase PAP [Plasmodium vivax Sal-1]
gi|148805139|gb|EDL46538.1| poly(A) polymerase PAP, putative [Plasmodium vivax]
Length = 649
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 172/293 (58%), Gaps = 45/293 (15%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++DE TVRSLNG RVAD IL VP+ +HF TLR +K WAK RG+YSN+ GFLGG++
Sbjct: 263 ILKNLDEVTVRSLNGIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGIS 322
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-----LGFSVWDPR 117
WALL A++CQLYPN S L+ +FFRVY++W W PV++ I++ FSVWDP
Sbjct: 323 WALLTAKICQLYPNYNVSQLIGKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPE 382
Query: 118 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELN--------- 168
KN +DK H MPIITPA+PCMNS++NV+ T +++D+F+ + I +E N
Sbjct: 383 KNIKDKLHVMPIITPAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEANPGANVTFVM 442
Query: 169 ----------------------------KAQWSALFEPYLFFESYRNYLQVDIVAANADD 200
+ W+ + +P F SY+++L + I+A N
Sbjct: 443 NQANGIVTPVSAPTTSSSTTGSGSIPGSGSMWTNILQPLDLFASYKHFLHIQIMATNELI 502
Query: 201 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC-AFFMGL 252
+WKGW+ES++R L +E T +L+ PYP YV +C +FF+GL
Sbjct: 503 YNSWKGWIESKIRLLFKKLE--TINELKIRPYPKFYVYKKDKFYYCSSFFIGL 553
>gi|10835833|pdb|1F5A|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
Length = 513
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 135/306 (44%), Positives = 185/306 (60%), Gaps = 14/306 (4%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAX 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
PIITPAYP NS+YNVS ST V +++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LXPIITPAYPQQNSTYNVSVSTRXVXVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 240
++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 429
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSH 295
K + +GL K E E D+ ++ F + +IN F + +I H
Sbjct: 430 KEEFRTXWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKXF-EVDXKIAAXH 487
Query: 296 IRRKQI 301
++RKQ+
Sbjct: 488 VKRKQL 493
>gi|403173934|ref|XP_003332965.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170759|gb|EFP88546.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 671
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/348 (38%), Positives = 194/348 (55%), Gaps = 38/348 (10%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D+ VRSL G RV D+IL+LVP+V F +LR +K WAK R VYSNV GF GGV
Sbjct: 184 ALLKNLDDRCVRSLGGSRVTDEILRLVPDVTVFRDSLRAIKLWAKSRAVYSNVMGFCGGV 243
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELG--FSVWDPRKN 119
WA+ VARVCQLYPN +V+RFF V + W WP+PV+L I G +W+P+
Sbjct: 244 AWAMCVARVCQLYPNKPAGTIVNRFFAVLSQWNWPSPVLLKPIGPGPPGDQRRIWNPKIY 303
Query: 120 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 179
+D+ H MPIITPAYPCM S++N++ ST ++MM +F+ G + +E+ W+ALF+ +
Sbjct: 304 PQDRGHRMPIITPAYPCMCSTHNITKSTAQIMMTEFKRGLAVTDEIATGTKPWAALFDKH 363
Query: 180 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMI----------------ERDT 223
FF YR YLQ+ + NA+ L W G VE+RLRQL + + ER++
Sbjct: 364 DFFTRYRYYLQITASSPNAEIQLKWAGTVEARLRQLVMKVEEVETVDLAHPFIKGFERES 423
Query: 224 Y-------GKLQCHPYPH----------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQ 265
Y +Q P E + S +FF+GL +P G ++
Sbjct: 424 YYLTSDEVRAIQVGDVPPDVKGRTLADIEGKEGSGAVYTSSFFIGLLVQPKPAGHTGPRK 483
Query: 266 FDIRGSVEEFKLSINMYM-FWKPGMEICVSHIRRKQIPPYVFPEGYKR 312
DI V EF + + + + M I V +I+ Q+P YVF +G +R
Sbjct: 484 LDISYPVGEFTRMVKQWEGYAEDSMGIIVRYIKGAQLPDYVF-DGEQR 530
>gi|164661493|ref|XP_001731869.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
gi|159105770|gb|EDP44655.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
Length = 527
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/231 (50%), Positives = 152/231 (65%), Gaps = 1/231 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE VRSL G RV D+IL LVPNV F LRC+K WA RR +YSNV GFLGGV
Sbjct: 176 NLLKNLDERDVRSLGGSRVTDEILHLVPNVYVFRLALRCIKLWASRRAIYSNVLGFLGGV 235
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPN V +VSRFF + W+WP PV+L I++ L VW+PR
Sbjct: 236 AWAMLVARICQLYPNEVAGAIVSRFFIILLQWKWPQPVLLKQIEDGPLPIRVWNPRLYPT 295
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP M +++NV+ ST VM ++F+ G+ + + + K W+ LFE F
Sbjct: 296 DRLHRMPIITPAYPSMCATHNVTQSTQMVMTEEFRRGSEVVDRIFRGKTSWNELFEKNDF 355
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F Y+ YLQV + +AD L W+G VESRLRQL + +E L HP+
Sbjct: 356 FHKYKYYLQVIASSGSADLQLKWQGTVESRLRQLIMKLEL-VPALLCAHPF 405
>gi|325190732|emb|CCA25225.1| predicted protein putative [Albugo laibachii Nc14]
Length = 539
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/315 (39%), Positives = 189/315 (60%), Gaps = 9/315 (2%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
LN +D+ +VRSLNGCRV ++IL+L+ + E+F TL +K+WA+ RG+YSNV GFLGGVN
Sbjct: 175 LNGLDDVSVRSLNGCRVTEKILQLISHQEYFRITLTAIKYWARNRGIYSNVLGFLGGVNL 234
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLC-AIDEAELGFSVWDPRKNRRD 122
A++ A+VCQLYP+A+P L+ +FF +Y +W WPNP+ + I+ +LGF W+P+ +D
Sbjct: 235 AIMAAKVCQLYPDALPPTLLIKFFHLYHLWNWPNPLSITPCINPLQLGFPSWNPKVYPKD 294
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITP YP +NSSYNV +STL VM +F+ + V WS L FF
Sbjct: 295 RLHLMPIITPCYPSINSSYNVMSSTLDVMKTEFKNASLQVSNVRAKVLSWSELLTEASFF 354
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 242
+ YR++LQV I + + +D W WVESRLR + +E + +++ P+ +
Sbjct: 355 DKYRHFLQVQISSEDEEDFGRWVTWVESRLRTFFIRLEAIPFVRIR--PFARFFNFQELK 412
Query: 243 CAHCA-FFMGLQ-RKPGEVVQEGQQ----FDIRGSVEEFKLSINMYMFWKPGMEICVSHI 296
A+ + FF+ L ++P + Q Q+ D +V F ++ + M++ V H+
Sbjct: 413 GAYISWFFVALDFQRPEDKRQNAQEPELTIDFSDAVRAFANHVDQWEERNSTMDLEVKHV 472
Query: 297 RRKQIPPYVFPEGYK 311
R QIP +V Y+
Sbjct: 473 VRSQIPAWVIDATYR 487
>gi|156405096|ref|XP_001640568.1| predicted protein [Nematostella vectensis]
gi|156227703|gb|EDO48505.1| predicted protein [Nematostella vectensis]
Length = 486
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/269 (46%), Positives = 168/269 (62%), Gaps = 6/269 (2%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D VRSLNGCRV D+IL+ VPN+E F TLR +K WAK+ GVYSNV GFLGGV+WA+
Sbjct: 188 NLDPKCVRSLNGCRVTDEILRQVPNIESFRLTLRAVKLWAKKHGVYSNVLGFLGGVSWAI 247
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI---DEAELGFSVWDPRKNRRD 122
LVAR CQLYPNA S L+ +FF V++ W WPNPV+L I E +LGF +WDPR N D
Sbjct: 248 LVARTCQLYPNAAASTLLQKFFLVFSRWEWPNPVLLKNIPTPSENKLGFQIWDPRTNPGD 307
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP N S++VS ST ++M D+F E+V KA W LF P FF
Sbjct: 308 RYHLMPIITPAYPQQNFSFSVSMSTRKIMCDEFFIRLKNTEDVISGKANWDILFTPPNFF 367
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY--VDTS 240
Y++Y+ + + ++ L W G VES++R L +E + Y KL H P Y +D+
Sbjct: 368 HKYKHYIVLSASSNTEEEHLEWIGLVESKVRLLISYLENNEYIKL-AHVNPKSYGPLDSE 426
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIR 269
+F+GL + E V ++I+
Sbjct: 427 GEKHVTRWFIGLMCEKLENVNINLTYEIQ 455
>gi|321249627|ref|XP_003191515.1| polynucleotide adenylyltransferase [Cryptococcus gattii WM276]
gi|317457982|gb|ADV19728.1| Polynucleotide adenylyltransferase, putative [Cryptococcus gattii
WM276]
Length = 644
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 136/394 (34%), Positives = 208/394 (52%), Gaps = 40/394 (10%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L VD+ + RSLNG RV D IL LVP+V F T LR ++ WAKRRG+YSNV GF GGV
Sbjct: 179 ILRGVDDASQRSLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVA 238
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA--ELGFSVWDPRKNR 120
WALL AR+CQLYP A P+ +V +FF +Y W WP PV+L ID + SVW+P+ +R
Sbjct: 239 WALLTARICQLYPAAAPATIVGKFFPIYYQWNWPQPVLLKKIDNGPPNMQHSVWNPKLDR 298
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV-ELNKAQWSALFEPY 179
RD+ H MP+ITPAYP M S++N+++ST+ ++ + I +E+ + + W LFE
Sbjct: 299 RDQAHRMPVITPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKTPGSSWIPLFEKV 358
Query: 180 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP-------- 231
FF Y+ Y+QV A+ +D + W G VESR+R L +E +T + HP
Sbjct: 359 DFFSMYKTYVQVVASASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGVNRV 417
Query: 232 ----------------YPHEYVDTS---------KPCAHCAFFMGLQRKPGEVVQEGQQF 266
E +D + + +FF+GL+ + G+
Sbjct: 418 FYCLTEEEQAAASQGELTAEMIDRTEEDVEGKEHRKIYTKSFFIGLEIEKKSKESGGRVL 477
Query: 267 DIRGSVEEF-KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
++ ++F + N + + M + + +R ++PPYVFP+G +++ QQ S
Sbjct: 478 NLFYPSKKFCAVCQNWDKYNEMEMSVILRPAKRSELPPYVFPDGMPKSKKKTKRQQQNGS 537
Query: 326 ENG--NEYQTGSGLKRKKDPESVDQDGPEKRQSI 357
E+ N+ G G ++ E + E +Q +
Sbjct: 538 EDAGMNDGSEGQGPSKRTKSEQTSFNNSELQQQL 571
>gi|156082541|ref|XP_001608755.1| poly(A) polymerase PAP [Babesia bovis T2Bo]
gi|154796004|gb|EDO05187.1| poly(A) polymerase PAP, putative [Babesia bovis]
Length = 512
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 128/330 (38%), Positives = 192/330 (58%), Gaps = 22/330 (6%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +++E T RS+NGCRVA IL VPN ++F TTLR +K WA RRG+Y+ V ++GGV
Sbjct: 182 AILRNMNEATARSINGCRVAALILASVPNKDNFRTTLRYVKLWANRRGLYTTVMAYMGGV 241
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-----LGFSVWDP 116
WA+L ARVCQLYPN +P+ L+ +FFRVY W W PVMLC I E + F VWDP
Sbjct: 242 AWAILTARVCQLYPNFLPNQLIQKFFRVYAQWNWKCPVMLCKIKEVPNIPGYMSFKVWDP 301
Query: 117 RKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ----W 172
R N D+ H MP+ITPA+P MNS++N++ +T R++ D+F+ N + +V AQ W
Sbjct: 302 RNNPTDRQHLMPVITPAFPSMNSTHNITLTTKRILTDEFKRANDLL-KVNAKGAQMKNIW 360
Query: 173 SALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
+ E F S++++L ++++A W+GW+ SR+R L IE T + P+
Sbjct: 361 ERVLEKEDMFASHKHFLVIEVLATTEHVHGKWEGWIGSRMRFLIKKIE--TVPNILVRPW 418
Query: 233 PH--EYVDTSKPCAHCAFFMGLQRKPGEVVQEGQ----QFDIRGSVEEFKLSINMYM--- 283
P +Y A C FF ++P + FD+R S++ FK IN +
Sbjct: 419 PEFFKYEHKEWDYASCVFFGFKCKEPDNKTNSAEPANKTFDMRMSIKGFKEIINSWTEME 478
Query: 284 FWKPGMEICVSHIRRKQIPPYVFPEGYKRT 313
+K + + + +++ Q+P +V P KRT
Sbjct: 479 AYKDQIAVNIRYLKNSQLPHFVNPRR-KRT 507
>gi|302696569|ref|XP_003037963.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
gi|300111660|gb|EFJ03061.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
Length = 649
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 137/387 (35%), Positives = 202/387 (52%), Gaps = 39/387 (10%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D+ VRSLNG RV D++L+LVPNV+ F LRC+K WA+R+ +YSNV GF GGV
Sbjct: 178 NILRNLDDRCVRSLNGYRVTDELLRLVPNVDVFRDALRCIKLWAQRKAIYSNVNGFPGGV 237
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVARVCQLYPNA +V RFF + W WP PV+L +D+ ++G W+P+
Sbjct: 238 AWAMLVARVCQLYPNANAGTVVGRFFPIMHQWPWPAPVILKHVDDLQMGQRSWNPKLFPG 297
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITP YP M +++NVS ST ++ ++ + G + + L ++WS LFE + F
Sbjct: 298 DRAHRMPVITPVYPAMCATHNVSVSTFAIIEEELRRGTKLMNSIILGSSKWSELFEKHDF 357
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH------- 234
F YR +LQ+ A+A+ L W VE+++RQL +E L HP+
Sbjct: 358 FHKYRYFLQIIASTASAEAQLMWAPNVEAKIRQLVSKLELVESLTL-AHPFTKGFEQVFY 416
Query: 235 ---------------------------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQF 266
E V++ F++GL +P V G ++
Sbjct: 417 CMNDDEIRSVAQGEVPDVIARRRPQDIEGVESGSKVYSTTFYIGLAIEPRPVGAIGTRRL 476
Query: 267 DIRGSVEEFKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
DI EF M+ F + M + V HI+ +P YVF G ++ R + + RSS
Sbjct: 477 DISYPTTEFTKVAKMWERFDEATMGLVVRHIKSSALPDYVFEPGERQPRSAQKRVKVRSS 536
Query: 326 E--NGNEYQTGSGLKRKKDPESVDQDG 350
N N Y T L + E +G
Sbjct: 537 YPVNENSYPTNGELSYATNGERSYTNG 563
>gi|221057822|ref|XP_002261419.1| putative poly(a) polymerase pap (poly(a) polymerase pap [Plasmodium
knowlesi strain H]
gi|194247424|emb|CAQ40824.1| putative poly(a) polymerase pap (poly(a) polymerase pap, putative
[Plasmodium knowlesi strain H]
Length = 637
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 171/286 (59%), Gaps = 38/286 (13%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++DE TVRSLNG RVAD IL VP+ +HF TLR +K WAK RG+YSN+ GFLGG++
Sbjct: 260 ILKNLDEVTVRSLNGIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGIS 319
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-----LGFSVWDPR 117
WALL A++CQLYPN S L+ +FFRVY++W W PV++ I++ FSVWDP
Sbjct: 320 WALLTAKICQLYPNYNVSQLICKFFRVYSIWNWKYPVLIQNINKYNNVDGLRNFSVWDPE 379
Query: 118 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ------ 171
KN +DK H MPIITPA+PCMNS++NV+ T +++D+F+ + I +E+N
Sbjct: 380 KNIKDKLHVMPIITPAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEMNPGANVTFVM 439
Query: 172 ------------------------WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGW 207
W+ + +P F +Y+++L + I+A + +WKGW
Sbjct: 440 NQANGVVTPVSAPSSSTTSSSSNIWTNILQPLDLFGTYKHFLHIQIMATSELIYNSWKGW 499
Query: 208 VESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC-AFFMGL 252
+ES++R L +E T +L+ PYP YV +C +FF+ L
Sbjct: 500 IESKIRLLFKKLE--TINELKIRPYPKFYVYQKDKFDYCSSFFIAL 543
>gi|344301689|gb|EGW31994.1| Poly(A) polymerase PAPalpha [Spathaspora passalidarum NRRL Y-27907]
Length = 556
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 111/239 (46%), Positives = 158/239 (66%), Gaps = 2/239 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +RSLNG RV D+IL+LVP F LRC+K WA++R VY NV GF GGV
Sbjct: 174 NLLKNIDERDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNVFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV +++V +FF +YT W WP PV+L I++ L VW+PR
Sbjct: 234 AWAMLVARICQLYPNAVSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPH 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N+++ST +V+M + G + ++ L K+ WSAL E + F
Sbjct: 294 DRLHRMPVITPAYPSMCATHNITSSTQKVIMSELARGAEVMNQINLGKSSWSALLERHDF 353
Query: 182 FESYRNYLQVDIVAANAD-DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 239
F Y+ YL + ++D + L W G VES+LR L L +E T G HPY ++ D+
Sbjct: 354 FHKYKFYLCIVAATTSSDEEHLKWSGLVESKLRHLVLKLEV-TDGIELAHPYVKDFSDS 411
>gi|86171578|ref|XP_966239.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
gi|46361205|emb|CAG25069.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
Length = 631
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 171/280 (61%), Gaps = 32/280 (11%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++DE TVRSLNG RVAD IL VPN ++F TLR +K WAK RG+YSN+ GFLGG++
Sbjct: 252 ILKNLDEVTVRSLNGIRVADLILNSVPNKDYFRNTLRFIKLWAKSRGIYSNILGFLGGIS 311
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAEL----GFSVWDPRK 118
WALL A++CQLYPN S L+ +FF+VY++W W PV+L I + + F VWDP K
Sbjct: 312 WALLTAKICQLYPNFNVSQLICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEK 371
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVE----------LN 168
N +DK H MPIITPA+PCMNS++NV+ T +++++F+ ++I + +E +N
Sbjct: 372 NIKDKLHIMPIITPAFPCMNSTHNVTYCTRNILIEEFKRAHSIIQYMEDENNIKSSIRMN 431
Query: 169 K---------------AQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLR 213
K W + EP F +Y+++L + I+ N +WKGW+ES++R
Sbjct: 432 KLWPNNNVNNINNSSNNVWMTILEPLDLFSTYKHFLHIQIMGINEFIYNSWKGWIESKIR 491
Query: 214 QLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC-AFFMGL 252
L +E T +L+ P+P Y + +C +FF+ L
Sbjct: 492 LLFKKLE--TINELKIRPFPKFYFYKKEKSYYCSSFFIAL 529
>gi|341899657|gb|EGT55592.1| hypothetical protein CAEBREN_22785 [Caenorhabditis brenneri]
Length = 630
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 127/354 (35%), Positives = 201/354 (56%), Gaps = 33/354 (9%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D ++RSLNGCRVA+Q+LKLVP + FCT LR +K WAK G+YSN GF GG++
Sbjct: 180 LLRNLDAESIRSLNGCRVAEQLLKLVPRQKEFCTALRAIKVWAKNHGIYSNSMGFFGGIS 239
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVML--CAIDEAE---LGFSVWDPR 117
WA+L+AR CQLYPNA PS LV R F +++ W WP+PV+L A D + L VWDP
Sbjct: 240 WAILIARACQLYPNASPSKLVHRMFFIFSTWTWPHPVLLKFAAKDRNDIPALCKLVWDPE 299
Query: 118 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 177
K DK H MPIITPA+P NS++NV+ S+ +++ D+ ICE++ KA+W LFE
Sbjct: 300 KKSSDKFHLMPIITPAFPEQNSTHNVTRSSSQIIKDEIWEALEICEQINDGKAKWKDLFE 359
Query: 178 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 237
FF Y++++ + + A N ++ L++ G++ESR+R L +ER+ + H P+++
Sbjct: 360 EVNFFSRYKHFIALIMAAPNEEEELSYGGFLESRIRLLVQSLERNP-DIILAHNDPNKH- 417
Query: 238 DTSKPCAHCAF------------FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFW 285
KP + F F+GL E + D+ ++ FK + +
Sbjct: 418 ---KPSKNAKFDVSPENKRITVWFIGL-----EFSEHATSLDLTNEIQRFKTNFELQASS 469
Query: 286 KPGM------EICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQT 333
G+ EI + H++++ + + R R + +S++++ N + T
Sbjct: 470 VKGIGPTCQVEIDMFHVKQRNLIQVISAADLSRGRRWKKSSKKQNKGNSSNKLT 523
>gi|313243939|emb|CBY14824.1| unnamed protein product [Oikopleura dioica]
Length = 630
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 206/383 (53%), Gaps = 38/383 (9%)
Query: 1 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
+ +L +++E VRSLNGCRV D+IL LVPN+E F TLR +K WA+R+G+Y N GF+GG
Sbjct: 170 IEILRNLEEKCVRSLNGCRVTDEILHLVPNIETFRLTLRAVKLWARRKGIYKNALGFIGG 229
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFS--VWDPRK 118
V WA+LVAR CQLYPNA PS L+ +FF +++ W WP PV L ++A GF+ VWDPR
Sbjct: 230 VCWAMLVARTCQLYPNAAPSTLLEKFFLLFSKWDWPKPVFLKVPEDAPPGFTHPVWDPRF 289
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVM----MDQFQYGNTICEEV----ELNKA 170
N D++H MPIITPAYP NS++NVS STL VM D ++ I ++ E N
Sbjct: 290 NPLDRSHLMPIITPAYPHQNSTFNVSRSTLSVMKQEIKDAYETTKQILQKTPNPDEPNTR 349
Query: 171 QWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCH 230
W+ LF FF Y++++ + A + W G VES +R+L +ER+ Y +
Sbjct: 350 LWADLFTRTDFFNKYKHFIVLSATADQQEQYQKWIGLVESNIRKLVNDLERNEYILI--- 406
Query: 231 PYPHEYVDT---------SKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF------ 275
H VD+ P C +F+GL EV ++ ++ F
Sbjct: 407 --AHVNVDSIELDPAEEGQSPRYVCRWFLGLSFHRCEV---KPNINLTSDIQRFTDLLHQ 461
Query: 276 -KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTG 334
+S N Y P M + +++R + ++ PE RT + + R S+ + Q+
Sbjct: 462 AAISHNNYT---PDMRVEARYVKRHNLVKFLTPE-LARTLKLSKSKEGRKSKTNAQNQSN 517
Query: 335 SGLKRKKDPESVDQDGPEKRQSI 357
K+ ++ ES + E ++ +
Sbjct: 518 GNTKKAEESESKNSQSKENKEKL 540
>gi|343427736|emb|CBQ71262.1| probable PAP1-poly(A) polymerase [Sporisorium reilianum SRZ2]
Length = 658
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 108/219 (49%), Positives = 144/219 (65%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE VRSL G RV D IL+LVPN+ F LRC+K WA+RR +YSNV GFLGGV
Sbjct: 188 NLLRNLDERDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGV 247
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+L AR+CQLYPN +VSRFF + W+WP PV+L I++ L VW+P+
Sbjct: 248 AWAMLTARICQLYPNEAAGAIVSRFFIILYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPS 307
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP M +++NVS ST VM +F+ + + V + K WS LF + F
Sbjct: 308 DRLHRMPIITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGKTHWSELFAKHDF 367
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE 220
F Y+ YLQV + +AD L W G VES++RQL + +E
Sbjct: 368 FFKYKYYLQVIASSGSADLQLKWHGTVESKIRQLVMKLE 406
>gi|71031845|ref|XP_765564.1| poly(A) polymerase [Theileria parva strain Muguga]
gi|68352521|gb|EAN33281.1| poly(A) polymerase, putative [Theileria parva]
Length = 507
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/323 (39%), Positives = 188/323 (58%), Gaps = 16/323 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++++ TVRS+NGCRVA IL VPN +F TTLR +K WA RR +YS V G+LGGV
Sbjct: 182 NILRNMNDSTVRSINGCRVASYILDSVPNKNYFRTTLRFIKLWASRRKIYSTVVGYLGGV 241
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-----AELGFSVWDP 116
WA+L ARVCQLYPN P+ L+ +FFRVY++W+W PV LC I E + F VWDP
Sbjct: 242 AWAILTARVCQLYPNCAPNQLIEKFFRVYSVWQWECPVTLCKIKEPPNIPGLMSFKVWDP 301
Query: 117 RKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-WSAL 175
R N +D+ H MPIITPA+P MNS++NV+ +T RV+ ++ I + L + W +
Sbjct: 302 RVNPQDRHHLMPIITPAFPSMNSTHNVTATTKRVITEELMRALEIFKTSNLTNVELWEKV 361
Query: 176 FEPYLFFESYRNYLQVDIVAANADDLL-AWKGWVESRLRQLTLMIERDTYGKLQCHPYP- 233
E F +Y+++L +++ +N W+GW+ SR+R L +E G P P
Sbjct: 362 LEEEDVFSNYKHFLVIEVYGSNEHVAHNKWEGWIGSRMRFLISRLE--NLGNTYIRPIPG 419
Query: 234 -HEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM---FWKPGM 289
++ D + A AFF + G VV+ + DIR SV+ FK IN + ++ +
Sbjct: 420 FFKFEDDNWDYASSAFF-AFKVISG-VVETSKTLDIRSSVQSFKDIINNWSDMEKYRDQI 477
Query: 290 EICVSHIRRKQIPPYVFPEGYKR 312
+ H++ Q+P YV K+
Sbjct: 478 SFNIKHLKNNQLPDYVLSNKSKK 500
>gi|341899656|gb|EGT55591.1| hypothetical protein CAEBREN_21062 [Caenorhabditis brenneri]
Length = 684
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 179/296 (60%), Gaps = 27/296 (9%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D ++RSLNGCRVA+Q+LKLVP + FCT LR +K WAK G+YSN GF GG++
Sbjct: 205 LLRNLDPESIRSLNGCRVAEQLLKLVPRQKEFCTALRAIKVWAKNHGIYSNSMGFFGGIS 264
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDPR 117
WA+L+AR CQLYPNA PS LV R F +++ W WP+PV+L + D L +WDPR
Sbjct: 265 WAILIARACQLYPNASPSKLVHRMFFIFSTWTWPHPVLLKELNQDRNDIPTLCELIWDPR 324
Query: 118 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 177
D+ H MPIITPA+P NS++NV+ ST +++ D+ IC ++ +A+WSALFE
Sbjct: 325 HKNTDRFHLMPIITPAFPEQNSTHNVTRSTHQIIKDEIWEALEICRDIHDGRAKWSALFE 384
Query: 178 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 237
FF Y++++ + + A N ++ L++ G++ESR+R L +ER+ + H P+++
Sbjct: 385 EVNFFSRYKHFIALIMAAPNEEEELSYGGFLESRIRLLVQSLERNP-DIILAHNDPNKH- 442
Query: 238 DTSKPCAHCAF------------FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINM 281
KP + F F+GL E + + D+ ++ FK ++ +
Sbjct: 443 ---KPSKNAKFDVSPENKRITVWFIGL-----EFAEHAKNLDLTNEIQRFKTNVEL 490
>gi|17565368|ref|NP_505683.1| Protein PAP-1 [Caenorhabditis elegans]
gi|3880758|emb|CAA16309.3| Protein PAP-1 [Caenorhabditis elegans]
Length = 655
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/297 (39%), Positives = 179/297 (60%), Gaps = 27/297 (9%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D+ +VRSLNGCRVA+Q+LKLVP + FC TLR +K WAK G+YSN GF GG+
Sbjct: 179 NLLRNLDQESVRSLNGCRVAEQLLKLVPRQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGI 238
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDP 116
WA+LVAR CQLYPNA PS LV R F +++ W WP+PV+L + D L VWDP
Sbjct: 239 TWAILVARACQLYPNASPSRLVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDP 298
Query: 117 RKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF 176
R+ D+ H MPIITPA+P NS++NV+ ST V+ ++ IC ++ K++W+ALF
Sbjct: 299 RRKNTDRFHVMPIITPAFPEQNSTHNVTRSTATVIKNEICEALEICRDISEGKSKWTALF 358
Query: 177 EPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
E FF Y++++ + + A N ++ L + G++ESR+R L +ER+ + H P+++
Sbjct: 359 EEVNFFSRYKHFIALIMAAPNEEEELNYGGFLESRIRLLVQSLERN-QDIIIAHNDPNKH 417
Query: 237 VDTSKPCAHCAF------------FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINM 281
KP + F F+GL E + + D+ ++ FK ++ +
Sbjct: 418 ----KPSPNAKFDVNPENKRVTVWFIGL-----EFAEHAKTLDLTNEIQRFKTNVEL 465
>gi|399218218|emb|CCF75105.1| unnamed protein product [Babesia microti strain RI]
Length = 501
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/312 (37%), Positives = 191/312 (61%), Gaps = 23/312 (7%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D+ T RS+NGCRVA +L VPN +F TLR +K WA++RG+YSN+ G+LGGV
Sbjct: 183 ILRNLDDITARSINGCRVASLVLSSVPNEHNFRNTLRFIKLWAQKRGIYSNILGYLGGVA 242
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-----AELGFSVWDPR 117
WA+L ARVCQLYPN +P+ ++ +FF+VY +W W PV++ I + + F VWDP+
Sbjct: 243 WAILTARVCQLYPNYLPNQIIHKFFKVYMLWNWKYPVVINKIKQPVNVPGLMMFKVWDPK 302
Query: 118 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 177
N +D+ H MPIITPA+P MNS++NV+ +T RVM+++F+ + + + ++ W+ L E
Sbjct: 303 TNPQDRLHLMPIITPAFPAMNSTHNVTNTTKRVMINEFKRAHELLKTQ--SQMTWNDLLE 360
Query: 178 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 237
P F ++++L + +VA++ W GW+ESR+R L +E + +L+ P+PH
Sbjct: 361 PANIFNEFKHFLVIIVVASDEKAHSKWHGWIESRIRFLIRKLEAIEHTELR--PWPHSIT 418
Query: 238 DTSKPCAHCAF-FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWK------PGME 290
+ + F+GL E QFDIR ++EFK N+ W+ ++
Sbjct: 419 MEDPDWTNSKWIFIGLSYNK----TEESQFDIRTPIKEFK---NLIFSWQELTSYESKVD 471
Query: 291 ICVSHIRRKQIP 302
+ + ++++ Q+P
Sbjct: 472 VRIEYMKKSQLP 483
>gi|391336102|ref|XP_003742422.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
Length = 576
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/277 (43%), Positives = 165/277 (59%), Gaps = 17/277 (6%)
Query: 1 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
M++L ++D VRSLNGCRV D+IL LVP++ F T LR +K WAK++GVYSNV G+LGG
Sbjct: 184 MTLLKNLDAKCVRSLNGCRVTDEILHLVPDIPVFRTALRTIKLWAKKKGVYSNVLGYLGG 243
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVML---CAIDEAELGFSVWDPR 117
V+WA+LVAR CQLYP+A +++V +FF V++ W WP PV L A + GFSVWD R
Sbjct: 244 VSWAMLVARTCQLYPHAAAAVVVQKFFLVFSQWPWPKPVHLRTQTAAHQHLGGFSVWDSR 303
Query: 118 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 177
N D+ H MPIITP YP NS++N S ST +M F+ G + E + K W LF
Sbjct: 304 TNVADRYHLMPIITPVYPEQNSTFNTSLSTRTIMTKAFKEGLAVTENILKGKGTWHDLFS 363
Query: 178 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEY 236
P FF Y+ ++ + VA +DLL W G VES++R L + +ER ++ +P +
Sbjct: 364 PPEFFGQYKTFIMLTAVANTKEDLLTWYGLVESKIRTLIISLERVPCIEIAHVNPKSYNK 423
Query: 237 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVE 273
V KP P E V+E Q+ + S E
Sbjct: 424 VKEDKP-------------PAEPVKEQQEESPKASAE 447
>gi|68482706|ref|XP_714750.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
gi|3334283|sp|O42617.1|PAP_CANAL RecName: Full=Poly(A) polymerase PAPalpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|2696030|dbj|BAA23802.1| poly A polymerase [Candida albicans]
gi|5771514|gb|AAD51412.1| unknown [Candida albicans]
gi|46436342|gb|EAK95706.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
Length = 558
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/241 (46%), Positives = 162/241 (67%), Gaps = 6/241 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +RSLNG RV D+IL+LVP F LRC+K WA++R VY N+ GF GGV
Sbjct: 174 NLLKNLDEKDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNIFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV S +V +FF +YT W WP PV+L +I++ L VW+PR
Sbjct: 234 AWAMLVARICQLYPNAVSSAIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPH 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N+++ST +V++ + G++I +E+ K WS LFE + F
Sbjct: 294 DRLHRMPVITPAYPSMCATHNITSSTQKVILAELSRGSSIMQEIHAGKKTWSDLFEKHSF 353
Query: 182 FESYRNYLQVDIVAA---NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 238
F Y+ YL V VAA +A++ W G++ES+LRQL L +E G HPY ++ +
Sbjct: 354 FYKYKFYLCV--VAASIDSAEEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDFSN 410
Query: 239 T 239
T
Sbjct: 411 T 411
>gi|238882575|gb|EEQ46213.1| Poly(A) polymerase [Candida albicans WO-1]
Length = 558
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/241 (46%), Positives = 162/241 (67%), Gaps = 6/241 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +RSLNG RV D+IL+LVP F LRC+K WA++R VY N+ GF GGV
Sbjct: 174 NLLKNLDEKDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNIFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV S +V +FF +YT W WP PV+L +I++ L VW+PR
Sbjct: 234 AWAMLVARICQLYPNAVSSAIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPH 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N+++ST +V++ + G++I +E+ K WS LFE + F
Sbjct: 294 DRLHRMPVITPAYPSMCATHNITSSTQKVILAELSRGSSIMQEIHAGKKTWSDLFEKHSF 353
Query: 182 FESYRNYLQVDIVAA---NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 238
F Y+ YL V VAA +A++ W G++ES+LRQL L +E G HPY ++ +
Sbjct: 354 FYKYKFYLCV--VAASIDSAEEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDFSN 410
Query: 239 T 239
T
Sbjct: 411 T 411
>gi|308478522|ref|XP_003101472.1| CRE-PAP-1 protein [Caenorhabditis remanei]
gi|308263118|gb|EFP07071.1| CRE-PAP-1 protein [Caenorhabditis remanei]
Length = 639
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 189/332 (56%), Gaps = 23/332 (6%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D+ +VRSLNGCRVA+Q+LKLVP ++C LR +K WAK G+YSN GF GG+
Sbjct: 177 SLLKNLDQESVRSLNGCRVAEQLLKLVPRQNNYCVALRAIKLWAKNHGIYSNSMGFFGGI 236
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDP 116
+WA+L+AR CQLYPNA PS LV R F ++ W WP+PV+L + D L VWDP
Sbjct: 237 SWAILIARACQLYPNASPSRLVHRMFFIFATWTWPHPVLLNELNSERTDVGALIDLVWDP 296
Query: 117 RKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF 176
R+ D+ H MPIITPA+P NS++NV+ ST++V+ + G IC ++ K W ALF
Sbjct: 297 RRKSTDRFHLMPIITPAFPQQNSTHNVTRSTMQVIRTEICEGLEICRDISEGKCGWDALF 356
Query: 177 EPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERD-----TYGKLQCH- 230
+ FF Y++Y+ + + A N ++ L + G++ESR+R L +ER+ + H
Sbjct: 357 KEVNFFSRYKHYIALLMAAPNEEEELNYGGFLESRIRLLVQSLERNQDIVIAHNDPNKHK 416
Query: 231 PYPHEYVDTSKPCAHCAF-FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM 289
P P+ D S F+GL E V+ + D+ + FK ++ + G+
Sbjct: 417 PSPNAKFDVSPENKRITLWFIGL-----EFVEHTKSLDLTSEIHRFKTNVELQASGVKGI 471
Query: 290 ------EICVSHIRRKQIPPYVFPEGYKRTRH 315
EI + +++R ++ + R RH
Sbjct: 472 GPNCTVEIDMFYVKRNKLFQIISNADLIRGRH 503
>gi|443899034|dbj|GAC76367.1| poly(a) polymerase and related nucleotidyltransferases [Pseudozyma
antarctica T-34]
Length = 672
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 118/269 (43%), Positives = 161/269 (59%), Gaps = 6/269 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE VRSL G RV D IL+LVPN+ F LRC+K WA+RR +YSNV GFLGGV
Sbjct: 188 NLLRSLDERDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGV 247
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+L AR+CQLYPN +VSRFF ++ W+WP PV+L I++ L VW+P+
Sbjct: 248 AWAMLTARICQLYPNEAAGAIVSRFFIIFYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPS 307
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP M +++NVS ST VM +F+ + + V + K WS LF + F
Sbjct: 308 DRLHRMPIITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGKTDWSELFAKHDF 367
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQC-HPYPHEYVDTS 240
+ Y+ YLQV + +AD L W G VES++RQL + +E + C HP+ + D
Sbjct: 368 YFKYKYYLQVIASSGSADLQLKWHGTVESKIRQLVMKLE--LVPTITCAHPFIKGF-DQV 424
Query: 241 KPCAHC--AFFMGLQRKPGEVVQEGQQFD 267
C + + P EV Q Q+ D
Sbjct: 425 SECHNDNEVRLVATGDIPDEVAQRTQKVD 453
>gi|389584571|dbj|GAB67303.1| poly(A) polymerase PAP [Plasmodium cynomolgi strain B]
Length = 628
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 119/285 (41%), Positives = 168/285 (58%), Gaps = 39/285 (13%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++DE TVRSLNG RVAD IL VP+ +HF TLR +K WAK RG+YSN+ GFLGG++
Sbjct: 265 ILKNLDEVTVRSLNGIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGIS 324
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-----LGFSVWDPR 117
WALL A+VCQLYPN S L+ +FFRVY++W W PV++ I++ FSVWDP
Sbjct: 325 WALLTAKVCQLYPNYNVSQLICKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPE 384
Query: 118 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ------ 171
KN +DK H MPIITPA+PCMNS++NV+ T +++D+F+ + I +E+N
Sbjct: 385 KNIKDKLHVMPIITPAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEMNPGANVTFVM 444
Query: 172 ------------------------WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGW 207
W+ + +P F +Y+++L + I+A N +WKGW
Sbjct: 445 NQANGIVTPVSTPSSNSSSSSSSIWTNILQPLDLFATYKHFLHIQIMATNELIYNSWKGW 504
Query: 208 VESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGL 252
+ES++R L +E T +L+ PYP YV K C F +
Sbjct: 505 IESKIRLLFKKLE--TINELRIRPYPKFYV--YKKDNTCVFLKNI 545
>gi|68070217|ref|XP_677020.1| poly(A) polymerase PAP [Plasmodium berghei strain ANKA]
gi|56496967|emb|CAH94131.1| poly(A) polymerase PAP, putative [Plasmodium berghei]
Length = 626
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 173/297 (58%), Gaps = 49/297 (16%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++DE TVRSLNG RVAD IL VPN ++F TLR +K WAKRRG+YSN+ GFLGG++
Sbjct: 251 ILKNLDEVTVRSLNGIRVADLILNSVPNKDNFRNTLRFIKLWAKRRGIYSNILGFLGGIS 310
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAEL----GFSVWDPRK 118
WALL A++CQ+YPN S L+ +FFRVY++W W PV++ I + + F++WDP K
Sbjct: 311 WALLTAKICQIYPNYNISQLICKFFRVYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEK 370
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELN---------- 168
N +DK H MPIITPA+PCMNS++NV+ T +++++F+ ++I ++LN
Sbjct: 371 NVKDKLHIMPIITPAFPCMNSTHNVTYCTRSILIEEFKRAHSIINYMDLNPDADIGQVME 430
Query: 169 --------------------------------KAQWSALFEPYLFFESYRNYLQVDIVAA 196
+ WS + EP+ F++Y+++L + I+
Sbjct: 431 HVNNLMSYGNAININNVGKSGDNENVNIHNNSSSIWSCIIEPFDLFKTYKHFLHIQIMGT 490
Query: 197 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC-AFFMGL 252
N WKGW+ES++R L +E T +L+ P+P Y +C +FF+ L
Sbjct: 491 NELIYNLWKGWIESKIRLLFKKLE--TINELKIRPFPKFYTYKKDKFYYCSSFFIAL 545
>gi|241955483|ref|XP_002420462.1| poly(A) polymerase, putative; polynucleotide adenylyltransferase,
putative [Candida dubliniensis CD36]
gi|223643804|emb|CAX41541.1| poly(A) polymerase, putative [Candida dubliniensis CD36]
Length = 558
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 112/241 (46%), Positives = 162/241 (67%), Gaps = 6/241 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +RSLNG RV D+IL+LVP F LRC+K WA++R VY N+ GF GGV
Sbjct: 174 NLLKNLDEKDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV S++V +FF +YT W WP PV+L +I++ L VW+PR
Sbjct: 234 AWAMLVARICQLYPNAVSSVIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPH 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N+++ST +V++ + G++I +++ K WS LFE + F
Sbjct: 294 DRLHRMPVITPAYPSMCATHNITSSTQKVILAELSRGSSIMQDIHAGKKSWSDLFEKHCF 353
Query: 182 FESYRNYLQVDIVAA---NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 238
F Y+ YL V VAA +A++ W G++ES+LRQL L +E G HPY ++
Sbjct: 354 FYKYKFYLCV--VAATIDSAEEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDFSH 410
Query: 239 T 239
T
Sbjct: 411 T 411
>gi|429328821|gb|AFZ80581.1| poly A polymerase, putative [Babesia equi]
Length = 523
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 125/320 (39%), Positives = 185/320 (57%), Gaps = 9/320 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++++ TVRS+NGCRVA IL VPN +F TLR +K WA RR +YS V G+LGGV
Sbjct: 182 NILRNMNDSTVRSINGCRVASFILDSVPNKANFRMTLRFIKLWASRRKIYSTVVGYLGGV 241
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-----LGFSVWDP 116
WA+L ARVCQLYPN VP+ L+ +FFRVY++W W PV LC I + + F VWDP
Sbjct: 242 AWAILTARVCQLYPNYVPNQLIEKFFRVYSLWNWKIPVTLCKIKQVPNLPGFMSFKVWDP 301
Query: 117 RKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF 176
+ N D+ H MPIITPA+P MNS++NV+ +T RVM D+ + I + K Q L
Sbjct: 302 QNNPHDRQHLMPIITPAFPSMNSTHNVTATTKRVMTDELKRARDILKSPNTPKNQLLELV 361
Query: 177 EPYL-FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHE 235
F SY+++L +++ A+ W+GW+ SR+R L +E +++ P +
Sbjct: 362 LEEEDIFSSYKHFLIIEVYGASEHAHGKWEGWIGSRMRFLIKKLENLPNTQIRPLPGFFK 421
Query: 236 YVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM---FWKPGMEIC 292
+ D+ A AFF + Q + DIR S++ FK IN + K +++
Sbjct: 422 FEDSEWEYASSAFFALKCLSNDKSGQGSKVLDIRSSIQSFKDIINGWTDMENLKDQIKVN 481
Query: 293 VSHIRRKQIPPYVFPEGYKR 312
+ H++ Q+P YV + K+
Sbjct: 482 IRHVKSSQLPDYVQAKNSKK 501
>gi|213406289|ref|XP_002173916.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
gi|212001963|gb|EEB07623.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
Length = 563
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 148/231 (64%), Gaps = 1/231 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L V+E + SLNG RV DQIL+LVPN F LR +KFWA+RR +Y+NV GF GGV
Sbjct: 174 NLLKGVEERCILSLNGTRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA++VAR+CQLYPNAV +++VS+FFR+ + W WP PV+L ID+ L VW+P+
Sbjct: 234 AWAMMVARICQLYPNAVSAVIVSKFFRILSQWNWPQPVLLKPIDDGPLQVRVWNPKLYPS 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
DK H MPIITPAYP M +++N++ ST V++ + I +++ K WSALFE + F
Sbjct: 294 DKAHRMPIITPAYPSMCATHNITPSTQTVILREMARAGLIVDDIMAGKKPWSALFEKHDF 353
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F YR YL V + AD L W G VES+LR +E L HP+
Sbjct: 354 FHRYRYYLTVTAASKTADSQLKWSGLVESKLRHFVTRLELVDAITL-AHPF 403
>gi|388857257|emb|CCF49099.1| probable PAP1-poly(A) polymerase [Ustilago hordei]
Length = 672
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 144/219 (65%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE VRSL G RV D IL+LVPN+ F LRC+K WA++R +YSNV GFLGGV
Sbjct: 188 NLLRNLDERDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQQRAIYSNVMGFLGGV 247
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+L AR+CQLYPN +VSRFF ++ W+WP PV+L I++ L VW+P+
Sbjct: 248 AWAMLTARICQLYPNEAAGAIVSRFFIIFYQWKWPQPVLLTPIEDGPLSVRVWNPKLYPS 307
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP M +++NVS ST VM +F+ + + V + K W LF + F
Sbjct: 308 DRLHRMPIITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGKTDWCELFAKHDF 367
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE 220
F Y+ YLQV + +AD L W G VES++RQL + +E
Sbjct: 368 FFKYKYYLQVIASSGSADLQLKWHGTVESKIRQLVMKLE 406
>gi|84999896|ref|XP_954669.1| polyA polymerase [Theileria annulata]
gi|65305664|emb|CAI73989.1| polyA polymerase, putative [Theileria annulata]
Length = 512
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/322 (38%), Positives = 186/322 (57%), Gaps = 15/322 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++++ TVRS+NGCRVA IL VPN +F TTLR +K WA RR +YS V G+LGGV
Sbjct: 182 NILRNMNDSTVRSINGCRVASYILDSVPNKNYFRTTLRFIKLWASRRKIYSTVVGYLGGV 241
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-----AELGFSVWDP 116
WA+L ARVCQLYPN P+ L+ +FFRV+++W+W PV LC I E + F VWDP
Sbjct: 242 AWAILTARVCQLYPNCAPNQLIEKFFRVFSVWQWECPVTLCKIKEPPNIPGLMSFKVWDP 301
Query: 117 RKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVEL-NKAQWSAL 175
R N +D+ H MPIITPA+P MNS++NV+ +T +V+ ++ I + L N W +
Sbjct: 302 RVNPQDRHHLMPIITPAFPSMNSTHNVTATTKKVITEELMRALEIFKTPNLSNLELWEKV 361
Query: 176 FEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP-- 233
E F +Y+++L +++ + W+GW+ SR+R L +E G P P
Sbjct: 362 LEEQDVFSNYKHFLVIEVYGSTEHAHGKWEGWIGSRMRFLISRLE--NLGNTHIRPIPGF 419
Query: 234 HEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM---FWKPGME 290
++ D + A AFF + G V + + DIR +V+ FK IN + ++ +
Sbjct: 420 FKFEDDNWDYASSAFF-AFKVISG-VAENSKTLDIRSAVQSFKDIINNWSDMEKYRDQIS 477
Query: 291 ICVSHIRRKQIPPYVFPEGYKR 312
+ H++ Q+P YV K+
Sbjct: 478 FNIKHLKNNQLPDYVLSNKSKK 499
>gi|384494476|gb|EIE84967.1| hypothetical protein RO3G_09677 [Rhizopus delemar RA 99-880]
Length = 408
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 149/217 (68%), Gaps = 2/217 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE ++RSLNG RVAD IL+LVPN+E F T LRC+K WA R+ +YSN+ GFLGGV
Sbjct: 180 ILWGLDEYSIRSLNGARVADDILRLVPNIETFRTALRCIKLWATRKAIYSNILGFLGGVA 239
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE--LGFSVWDPRKNR 120
WA+LVARVCQLYP+A S +V FF++ W WP+PVML A+++ W+P+ N
Sbjct: 240 WAILVARVCQLYPHASASTVVYHFFQILVHWSWPSPVMLKAVEDGPPLAATRPWNPKLNP 299
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
D++H MPIITP+YP M S++NV ST R++M + + I +++ A W+ LF+ +
Sbjct: 300 TDRSHRMPIITPSYPSMCSTHNVIPSTQRIIMGEIKQAAEIVQKIRTGSATWARLFQSHN 359
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTL 217
FFE Y YLQ+ +VA N + L W G VE+RLRQL L
Sbjct: 360 FFEIYMQYLQITVVADNYNLQLKWAGLVEARLRQLLL 396
>gi|384487946|gb|EIE80126.1| hypothetical protein RO3G_04831 [Rhizopus delemar RA 99-880]
Length = 598
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 107/231 (46%), Positives = 155/231 (67%), Gaps = 1/231 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE VRSLNG RV D IL+LVPNV F LR +K WAK + +YSNV GFLGGV
Sbjct: 177 NILKNLDERCVRSLNGSRVTDDILRLVPNVATFRIALRTIKLWAKCKAIYSNVMGFLGGV 236
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+L+AR+CQLYPNA + +V+RFF + W+WP PV+L +++ L VW+P+
Sbjct: 237 AWAMLIARICQLYPNACAASIVNRFFLIMYQWKWPQPVLLRPLEDGPLQVRVWNPKLYPA 296
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MPIITPAYP M +++NV+ ST ++M+ +F+ G + + L QWS LF F
Sbjct: 297 DRSHRMPIITPAYPSMCATHNVTESTRKIMIQEFKNGIDVASNIILGSGQWSDLFVKSDF 356
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F+ +++YLQ+ + +++ L W G VE++LRQL L +E +L HPY
Sbjct: 357 FQQFKHYLQITSSSYSSETQLMWSGLVEAKLRQLVLKLETVDMIEL-AHPY 406
>gi|405117907|gb|AFR92682.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
grubii H99]
Length = 644
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 137/421 (32%), Positives = 210/421 (49%), Gaps = 50/421 (11%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L VD+ + RSLNG RV D IL LVP+V F T LR ++ WAKRRG+YSNV GF GGV
Sbjct: 179 ILRGVDDASQRSLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVA 238
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA--ELGFSVWDPRKNR 120
WALL AR+CQLYP A P+ ++ +FF +Y W WP PV+L ID + SVW+P+ +R
Sbjct: 239 WALLTARICQLYPAAAPATIIGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDR 298
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV-ELNKAQWSALFEPY 179
RD+ H MP+ITPAYP M S++N+++ST+ ++ + I +E+ + + W LFE
Sbjct: 299 RDQAHRMPVITPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKTPDSSWIPLFEKV 358
Query: 180 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP-------- 231
FF Y+ Y+QV A+ +D + W G VESR+R L +E +T + HP
Sbjct: 359 DFFSMYKTYVQVVASASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGVNRL 417
Query: 232 ----------------YPHEYVDTS---------KPCAHCAFFMGLQRKPGEVVQEGQQF 266
E +D + + +FF+GL+ + G+
Sbjct: 418 FYCLTEEEQAAASQGELTAEMIDRTEEDVKDKEHRKIYTKSFFIGLEIEKKSKETGGRVL 477
Query: 267 DIRGSVEEF-KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
++ ++F + N + + M + + +R ++P YVFP+G +++ QQ S
Sbjct: 478 NLFYPSKKFCAVCQNWDKYNEMEMSVILRPAKRSELPSYVFPDGMPKSKKKTKRQQQNGS 537
Query: 326 ENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEP 385
+ G GP KR ++ P P+ V G++ P
Sbjct: 538 GDAGMNDGSEG------------QGPSKRTKSEQTSINNFEPQQQLPNGVPVPNGADPVP 585
Query: 386 V 386
+
Sbjct: 586 L 586
>gi|403220429|dbj|BAM38562.1| polyadenylate polymerase [Theileria orientalis strain Shintoku]
Length = 511
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 118/312 (37%), Positives = 181/312 (58%), Gaps = 11/312 (3%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++ + VRS+NGCRVA IL VP +F TTLR +K WA RR +YS V G+LGGV
Sbjct: 183 ILRNMSDSNVRSINGCRVASFILDSVPKKGNFRTTLRFIKLWASRRKIYSTVVGYLGGVA 242
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-----LGFSVWDPR 117
WA+L ARVCQ+YPN P+ L+ +FF+V++MW W PV LC I + F VWDP
Sbjct: 243 WAILTARVCQMYPNFAPNRLIEKFFKVFSMWNWIYPVTLCKIKRESGVPGLMSFKVWDPT 302
Query: 118 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-WSALF 176
+ +D+ H MPIITPA+P MNS++NV+ +T RV+ ++ + + L Q W +
Sbjct: 303 NSLQDRQHLMPIITPAFPSMNSTHNVTATTKRVVTEELSRAAQLLKTPNLTNTQLWEMVL 362
Query: 177 EPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
E F Y+++L +++ ++ W+GW+ SR+R L +E Y +++ P ++
Sbjct: 363 EEEDVFSKYKHFLVIEVYGSSEHAHNKWEGWIGSRMRFLIKKLETLEYTQIRPLPGFFKF 422
Query: 237 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM---FWKPGMEICV 293
D A AFF P VV+ Q FDIR ++ FK IN + +K +++ +
Sbjct: 423 EDRDWEYASSAFFAFKHTAP--VVEGYQSFDIRMPIQSFKEIINTWCDMETFKDQIDVNI 480
Query: 294 SHIRRKQIPPYV 305
+++ KQ+P Y+
Sbjct: 481 RYLKSKQLPDYI 492
>gi|126139251|ref|XP_001386148.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
alpha) [Scheffersomyces stipitis CBS 6054]
gi|126093430|gb|ABN68119.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
alpha) [Scheffersomyces stipitis CBS 6054]
Length = 556
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 158/239 (66%), Gaps = 2/239 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +RSLNG RV D+IL+LVP F LRC+K WA+++ VY NV GF GGV
Sbjct: 174 NLLRNLDERDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQKAVYGNVFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV +++V +FF +YT W WP PV+L I++ L VW+PR
Sbjct: 234 AWAMLVARICQLYPNAVSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYAN 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N+++ST +V++ + + G + ++ L K WS LF+ + F
Sbjct: 294 DRLHRMPVITPAYPSMCATHNITSSTQKVILSELEKGAEVVRQINLGKKSWSDLFDRHDF 353
Query: 182 FESYRNYL-QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 239
F Y+ YL V A+ ++ L W G +ES+LR L L +E T G HPY ++ D+
Sbjct: 354 FHHYKFYLCVVAATVASDEEHLKWTGLIESKLRHLVLKLEV-TEGVELAHPYVKDFSDS 411
>gi|83285836|ref|XP_729897.1| poly(A) polymerase III [Plasmodium yoelii yoelii 17XNL]
gi|23489018|gb|EAA21462.1| poly(A) polymerase III [Plasmodium yoelii yoelii]
Length = 613
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 114/297 (38%), Positives = 172/297 (57%), Gaps = 49/297 (16%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++DE TVRSLNG RVAD IL VPN ++F TLR +K WAKRRG+YSN+ GFLGG++
Sbjct: 251 ILKNLDEVTVRSLNGIRVADLILNSVPNKDNFRNTLRFIKLWAKRRGIYSNILGFLGGIS 310
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAEL----GFSVWDPRK 118
WALL A++CQ+YPN S L+ +FFRVY++W W PV++ I + + F++WDP K
Sbjct: 311 WALLTAKICQIYPNYNISQLICKFFRVYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEK 370
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELN---------- 168
N +DK H MPIITPA+PCMNS++NV+ T +++++F+ ++I ++ N
Sbjct: 371 NVKDKLHIMPIITPAFPCMNSTHNVTYCTRSILIEEFKRAHSIINYMDSNPDADISQVME 430
Query: 169 --------------------------------KAQWSALFEPYLFFESYRNYLQVDIVAA 196
+ WS + EP+ F++Y+++L + I+
Sbjct: 431 HVNNLMSHGNAININNVGKSGDNENVNIHNNNSSIWSCIIEPFDLFKTYKHFLHIQIMGT 490
Query: 197 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC-AFFMGL 252
N WKGW+ES++R L +E T +L+ P+P Y +C +FF+ L
Sbjct: 491 NELIYNLWKGWIESKIRLLFKKLE--TINELKIRPFPKFYTYKKDKFYYCSSFFIAL 545
>gi|401409652|ref|XP_003884274.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
gi|325118692|emb|CBZ54243.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
Length = 701
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 137/334 (41%), Positives = 190/334 (56%), Gaps = 38/334 (11%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
VL VDE T RS+NG RVAD +LKLVPN E F TLR +K WAK RG+YSNV G+LGG++
Sbjct: 286 VLRHVDEKTARSVNGSRVADLVLKLVPNKETFKVTLRFVKHWAKVRGIYSNVLGYLGGIS 345
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN-PVMLCAIDEAEL----GFSVWDPR 117
WA+LVAR CQLYPN PS L+ RFF VY++W+W N PV+LC I E + F +W+P+
Sbjct: 346 WAILVARCCQLYPNFAPSQLIHRFFTVYSIWKWKNSPVLLCKIKEHTVEGLSNFKIWNPK 405
Query: 118 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICE----EVELNKAQWS 173
N +D+ H +PIITPA+P MNS++NVS ST RV+ D+F I + + E++ +
Sbjct: 406 VNVQDRHHLLPIITPAFPSMNSTHNVSLSTKRVITDEFANAKRIFDVWDKKKEISWTEAL 465
Query: 174 ALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP 233
L L F S++++L++ I A N W GWVES++R L +ER C P+
Sbjct: 466 HLVLKPLDFTSFKHFLELQIFAQNETVHRKWLGWVESKVRFLVRQLERLA----ACPPFA 521
Query: 234 -------HEYVDTSKPCAHCAFFMGLQRKPG-----------EVVQEGQQFDIRGSVEEF 275
E T +P C F ++PG Q+ D+R + EF
Sbjct: 522 AGGHTPKSEAAMTVRPIP-CTFSF---QEPGWEYASSMLVALNFAQQPCVIDLRPAAGEF 577
Query: 276 KLSINMY---MFWKPGMEICVSHIRRKQIPPYVF 306
IN + + +++ V H+RR Q+P YV
Sbjct: 578 VDLINQWPERAQLEGQIQLRVKHVRRSQLPAYVL 611
>gi|402226328|gb|EJU06388.1| polymerase [Dacryopinax sp. DJM-731 SS1]
Length = 620
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 136/407 (33%), Positives = 211/407 (51%), Gaps = 52/407 (12%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE VRSL G RV D+IL+LVP F LR +K WA+RR +YSNV GFLGGV
Sbjct: 177 NLLRNLDERDVRSLGGSRVTDEILRLVPQPVVFRDALRAVKLWAQRRAIYSNVIGFLGGV 236
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQL+P + ++SRFF + W WP P++L AI++ L VW+P+
Sbjct: 237 AWAMLVARICQLFPKYDAASILSRFFHIIGQWAWPQPILLKAIEDGPLNVRVWNPQIYPS 296
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+TH MPIITPAYP M +++NV+ ST+++M ++ + G+ I E++ W+ LFE + F
Sbjct: 297 DRTHLMPIITPAYPSMCATHNVTHSTMKIMQNELRRGSQIVEKIIQAGEPWANLFEKHDF 356
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP-------- 233
F YR YLQ+ I + N + W G VES++R L +E ++ HP+
Sbjct: 357 FHMYRYYLQIIITSGNQEMYHKWAGTVESKIRLLVGKLELQEAVEI-AHPFTKGLDQVVC 415
Query: 234 --------------------------HEYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQF 266
HE D F++GL +P Q G ++
Sbjct: 416 CLNDDEVRAVAKYEMDDEVLKRSETEHEGKDGVSKVFMKTFYIGLGVEPKPAGQTGPRKL 475
Query: 267 DIRGSVEEFKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
DI EF ++ ++ ++ + M I + +++ +P F G ++ + + +S
Sbjct: 476 DISYPTIEFVKTVKLWDLYEEEQMGIVIRYVKHSALPDNCFEGGVRQALAGKGVKRTKS- 534
Query: 326 ENGNEYQTGSGLK--RKKDPESVDQD-GPEKRQSISPQKQDSLSPDH 369
+ G G K + P V D P K+ Q++DSL+ DH
Sbjct: 535 ------KAGDGKKPLSRTSPHDVSGDYSPHKK-----QRKDSLTGDH 570
>gi|50557132|ref|XP_505974.1| YALI0F28039p [Yarrowia lipolytica]
gi|49651844|emb|CAG78786.1| YALI0F28039p [Yarrowia lipolytica CLIB122]
Length = 518
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 114/234 (48%), Positives = 154/234 (65%), Gaps = 6/234 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +VD+ +R+LNG RV D IL+LVPN F LR +K WA+ R VY N+ GF GGV
Sbjct: 173 NLLRNVDDKDLRALNGTRVTDDILRLVPNKTVFKHALRVIKIWAQNRAVYGNIMGFPGGV 232
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
W +LVARVCQLYPNAV ++++SRFF V WRWP PV+L I++ L VW+PR +
Sbjct: 233 QWGILVARVCQLYPNAVAAVILSRFFNVLLRWRWPQPVLLKKIEDGPLQARVWNPRIYSQ 292
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
DK H MPIITPAYP M +++N++ ST +V++ + + G I E+ L + WSALFE + F
Sbjct: 293 DKLHRMPIITPAYPSMCATHNITASTQKVILRELERGGQILNEIMLGQKPWSALFEKHHF 352
Query: 182 FESYRNYLQVDIVAAN---ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F Y+ YL IVAA+ A+ L W G+VES+LR L +E +L HPY
Sbjct: 353 FSDYKYYLS--IVAASKGTAEQQLKWSGFVESKLRHLVQKLELLDSIEL-AHPY 403
>gi|294657491|ref|XP_459799.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
gi|199432733|emb|CAG88038.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
Length = 571
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 110/234 (47%), Positives = 157/234 (67%), Gaps = 6/234 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +RSLNG RV D+IL LVP F LRC+K WA++R +Y+NV GF GGV
Sbjct: 174 NLLRNIDEKDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV +++V +FF +Y W WP PV+L I++ L VW+P+
Sbjct: 234 AWAMLVARICQLYPNAVSAVIVEKFFHIYAQWSWPQPVLLKPIEDGPLQVRVWNPKLYPH 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N+++ST ++++D+F+ G I ++ +NK+ WS L + F
Sbjct: 294 DRQHRMPVITPAYPSMCATHNITSSTQKIILDEFKRGIDIMSQISMNKSTWSDLLARHTF 353
Query: 182 FESYRNYLQVDIVAA---NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F Y+ YL IVAA +++D L W G VESRLR L +E T G HPY
Sbjct: 354 FYKYKFYLC--IVAATQGSSEDHLKWGGMVESRLRLLIQKLEM-TEGIEIAHPY 404
>gi|58258863|ref|XP_566844.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222981|gb|AAW41025.1| polynucleotide adenylyltransferase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 642
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 138/421 (32%), Positives = 210/421 (49%), Gaps = 50/421 (11%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L VD+ + RSLNG RV D IL LVP+V F T LR ++ WAKRRG+YSNV GF GGV
Sbjct: 179 ILRGVDDASQRSLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVA 238
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA--ELGFSVWDPRKNR 120
WALL AR+CQLYP A P+ +V +FF +Y W WP PV+L ID + SVW+P+ +R
Sbjct: 239 WALLTARICQLYPAAAPATIVGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDR 298
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV-ELNKAQWSALFEPY 179
RD+ H MP+ITPAYP M S++N+++ST+ ++ + I +E+ + + W LFE
Sbjct: 299 RDQAHRMPVITPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKTPDSSWIPLFEKV 358
Query: 180 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP-------- 231
FF Y+ Y+QV A+ +D + W G VESR+R L +E +T + HP
Sbjct: 359 DFFSMYKTYVQVVASASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGVNRV 417
Query: 232 ----------------YPHEYVDTS---------KPCAHCAFFMGLQRKPGEVVQEGQQF 266
E +D + + +FF+GL+ + G+
Sbjct: 418 FYCLTEEEQAAASQGELTAEMIDRTEEDVKNREHRKIYTKSFFIGLEIEKKSKETGGRVL 477
Query: 267 DIRGSVEEF-KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
++ ++F + N + + M + + +R ++P YVFP+G +++ QQ S
Sbjct: 478 NLFYPSKKFCAVCQNWDKYNEMEMSVILRPAKRSELPSYVFPDGMPKSKKKTKRQQQNGS 537
Query: 326 ENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEP 385
+ G GP KR ++ P P+ V G++ P
Sbjct: 538 GDAGMNDGSEG------------QGPSKRTKSEQTLINNFEPQQQLPNGVPVPNGADPVP 585
Query: 386 V 386
+
Sbjct: 586 L 586
>gi|302684083|ref|XP_003031722.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
gi|300105415|gb|EFI96819.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
Length = 558
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 126/348 (36%), Positives = 187/348 (53%), Gaps = 48/348 (13%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++DE ++SL G R+ D+IL L+PN + F LRC+K WA+RR +YSN+ GFLGGV
Sbjct: 176 LLRNLDERCIKSLGGSRLVDEILSLIPNHQVFRDALRCIKLWAQRRAIYSNINGFLGGVA 235
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR+CQLYPNAV +V RFF + W+WP PV+L I+E L +W+P+ D
Sbjct: 236 WAMLVARICQLYPNAVAGTIVRRFFGIMWRWQWPQPVLLKQIEEGPLEVRIWNPQVYPSD 295
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITP+YP MNS++NVS ST VM+ +F+ G I +++ +A W+ LF + FF
Sbjct: 296 RAHRMPIITPSYPSMNSTHNVSYSTQTVMIHEFKRGLDIVGQIQKGEASWADLFNKHTFF 355
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQC-HPYPHEYV---- 237
+R+YLQ + A+ADD + W QL L ++ +Q P+ +
Sbjct: 356 TDFRHYLQ---IVASADDQHSHDKW------QLVLRLDAQEGSIIQVTRPFIKGFERIYH 406
Query: 238 ---------------------------DTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRG 270
D + AFF+GL+ KP + +Q +I
Sbjct: 407 CISDDERRAATEGRFSDLKAAEGRPAGDKTTTVYTTAFFLGLEFKPKDGNSGTRQLNISF 466
Query: 271 SVEEFKLSINMYMFW----KPGMEICVSHIRRKQIPPYVFPEGYKRTR 314
EF N+ W + M + V HI+R ++P +V+ +R R
Sbjct: 467 PTGEF---CNLVKKWETYDETKMRVNVRHIKRSELPEFVYESPAERPR 511
>gi|320038983|gb|EFW20918.1| Poly(A) polymerase [Coccidioides posadasii str. Silveira]
Length = 590
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 121/337 (35%), Positives = 189/337 (56%), Gaps = 24/337 (7%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +R +NG RV D+IL+LVP + F LR +K WA+ R +YSNV GF GGV
Sbjct: 181 LLRGLDEREIRCVNGTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S++V +FFR+ W WP PV+L I++ L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGD 300
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP M +++NVS ST V++ + + G I E++ L + +WS LF + FF
Sbjct: 301 RFHLMPIITPAYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFF 360
Query: 183 -ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV---- 237
+ Y+ YL + + + + W G VE++LR L + +++ ++ HP+P +V
Sbjct: 361 SKDYKYYLNITASSTSKEAQSVWSGLVEAKLRHLVIALDKKASIEV-AHPFPKAHVAALE 419
Query: 238 ---------------DTSKPCAH-CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINM 281
+++ H +++GL+ KP V + DI FK
Sbjct: 420 SANGSINMPGLGQTEESNNHTLHTTTYYIGLELKP-LVPGASRSLDISSETHMFKNMCTS 478
Query: 282 YMFWKPGM-EICVSHIRRKQIPPYVFPEGYKRTRHPR 317
+ ++PG+ ++ ++H+R +P VF G R P+
Sbjct: 479 WAQYQPGINDLTITHVRNYDLPEDVFHPGETRPVRPK 515
>gi|345490104|ref|XP_003426299.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
[Nasonia vitripennis]
Length = 383
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 188/326 (57%), Gaps = 8/326 (2%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHF-CTTLRCLKFWAKRRGVYSNVTGFLGGV 61
+L +D+ VRSLNGCRV +IL+ V N+E+F TTL+ +K AK G+YSNV G+LG V
Sbjct: 59 LLKYLDQKCVRSLNGCRVTKEILQSVSNLENFRLTTLKAIKLRAKNNGIYSNVLGYLGVV 118
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA P+ L+ +FF ++++W WP PV+L ++ + LG VWDPR N
Sbjct: 119 SWAILVARTCQLYPNAAPATLIEKFFLIFSIWEWPRPVLLKSVKKVNLGLQVWDPRVNAS 178
Query: 122 DK--THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 179
D+ H MPIITPAYP NS++NV+ ST +M + + I +++ + KA W LFEP
Sbjct: 179 DRPPYHLMPIITPAYPQQNSTFNVTISTRTIMEEAIKTVLAITKDIAMGKASWDKLFEPS 238
Query: 180 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERD---TYGKLQCHPYPHEY 236
FF+ ++++ + + + W G++ES++R L +R+ T+ + +P
Sbjct: 239 NFFDEXKHFVILSASSLTNKMSIEWSGFIESKIRHLIGSFDRNPNITFAHINPKSFPP-- 296
Query: 237 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHI 296
+ + C + +GL + E + DI+ ++ + + +K GM ++
Sbjct: 297 LKPEEDEHGCMWLIGLTFRKAEKLSIDLTSDIKSFIKTTEGQVKKSNLFKDGMSQEAKYV 356
Query: 297 RRKQIPPYVFPEGYKRTRHPRLASQQ 322
RRK + Y+ KR R ++QQ
Sbjct: 357 RRKNLSNYIAANQIKRGRKTSSSTQQ 382
>gi|341895379|gb|EGT51314.1| hypothetical protein CAEBREN_01393 [Caenorhabditis brenneri]
Length = 1333
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 201/349 (57%), Gaps = 23/349 (6%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D+ +VRSLNG RVA+++L+LVPN E FC TLR +K WAK GVYSN GF GG+
Sbjct: 988 NLLKNMDQESVRSLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGI 1047
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCA-----IDEAELGFSVWDP 116
WALLVAR CQLYPNA PS LV + F V++ W +P+P++LC D L W
Sbjct: 1048 TWALLVARTCQLYPNATPSRLVQKVFYVFSTWNYPSPIVLCMPTRERPDMLALDNLCWG- 1106
Query: 117 RKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF 176
+N D+ H MPIITPA+P NS++NVS ST+ V+ + IC +V K W LF
Sbjct: 1107 -RNHADRFHLMPIITPAFPEQNSTHNVSRSTMEVIKKEMADALIICNDVFEGKCDWKFLF 1165
Query: 177 EPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
E F+ Y++++ + + A + ++ G++ESRLR L ER+ KL H P +
Sbjct: 1166 EEVNFYSQYKHFVVMKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKL-AHLNPKKC 1224
Query: 237 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG---MEICV 293
TSK + +F+GL+ EVV + D+ ++ FK ++N+ G +E+ +
Sbjct: 1225 QPTSK--SQSLWFIGLEF--DEVV---KNMDLTREIDNFKWNLNVQAKQIAGFEDVELDI 1277
Query: 294 SHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKD 342
S+++R Q+ Y+ K+ R + S+E+ E GLKRK D
Sbjct: 1278 SYVKRSQLIKYLPAAELKKG---RFFVAKGSAEDNKE--NAGGLKRKCD 1321
>gi|324975487|gb|ADY62671.1| PAPa [Candida metapsilosis]
Length = 547
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 156/238 (65%), Gaps = 6/238 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +RSLNG RV D+IL+LVP F LRC+K WA+ R VY NV GF GGV
Sbjct: 173 NLLKNLDERDLRSLNGTRVTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGV 232
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+L AR+CQLYPNAV S++V +FF +YT W WP PV+L AI++ L VW+PR
Sbjct: 233 AWAMLTARICQLYPNAVSSVIVEKFFSIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAH 292
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N+++ST +V++ + G ++ + + + WS LFE + F
Sbjct: 293 DRLHRMPVITPAYPSMCATHNITSSTQKVIIQELLRGASVMKSIFEGEKTWSDLFERHNF 352
Query: 182 FESYRNYLQVDIVAANAD---DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
F YR YL V VAA D + W G+VES+LRQL L +E T G HPY ++
Sbjct: 353 FHRYRFYLCV--VAATVDSAEEHHKWHGFVESKLRQLVLKLE-STEGIEIAHPYVKDF 407
>gi|255732153|ref|XP_002551000.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
gi|240131286|gb|EER30846.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
Length = 558
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 158/238 (66%), Gaps = 6/238 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +RSLNG RV D+IL+LVP F LRC+K WA++R VY NV GF GGV
Sbjct: 175 NLLKNLDEKDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNVYGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV +++V +FF +YT W WP PV+L +I++ L VW+PR
Sbjct: 235 AWAMLVARICQLYPNAVSAVIVEKFFSIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPH 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N+++ST +V++ + G++I ++ WS LF+ + +
Sbjct: 295 DRLHRMPVITPAYPSMCATHNITSSTQKVILKELSRGSSIMNDINTGNKTWSDLFKRHEY 354
Query: 182 FESYRNYLQVDIVAANAD---DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
F +Y+ YL V VAA D W G+VESRLRQL L +E T G HPY ++
Sbjct: 355 FHAYKFYLCV--VAATVDTSEQHKKWSGFVESRLRQLVLKLEV-TDGIEFAHPYVKDF 409
>gi|221508263|gb|EEE33850.1| poly(A) polymerase, putative [Toxoplasma gondii VEG]
Length = 778
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/332 (41%), Positives = 186/332 (56%), Gaps = 30/332 (9%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
VL VDE T RS+NG RVAD ILKLVPN E F TLR +K WAK RG+YSNV G+LGGV+
Sbjct: 364 VLRHVDEKTARSVNGSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVS 423
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN-PVMLCAIDEAE----LGFSVWDPR 117
WA+LVAR CQLYPN PS LV RFF VY++W W N PV+LC I E F VW+P+
Sbjct: 424 WAILVARCCQLYPNFAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPK 483
Query: 118 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICE----EVELNKAQWS 173
N +D+ H +PIITPA+P MNS++NVS ST RV+ ++F I + + E++ +
Sbjct: 484 VNLQDRHHLLPIITPAFPSMNSTHNVSLSTKRVITEEFANAKRIFDIWDKKKEISWTEAL 543
Query: 174 ALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYG-------- 225
L L F S++++L++ + A N W GWVES++R L +ER G
Sbjct: 544 HLVLKPLDFTSFKHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGS 603
Query: 226 ------KLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI 279
+ P P + +P CA M + Q+ D+R + EF I
Sbjct: 604 TPKFEAAMTVRPIPCTF-SFQEPGWECASSMLVALN---FAQQPCVIDLRPAAGEFVDLI 659
Query: 280 NMY---MFWKPGMEICVSHIRRKQIPPYVFPE 308
N + +++ V H+RR Q+P YV +
Sbjct: 660 NQWPERAQLDGQIQLRVKHLRRSQLPAYVLKQ 691
>gi|221486493|gb|EEE24754.1| poly(A) polymerase, putative [Toxoplasma gondii GT1]
Length = 795
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/332 (41%), Positives = 186/332 (56%), Gaps = 30/332 (9%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
VL VDE T RS+NG RVAD ILKLVPN E F TLR +K WAK RG+YSNV G+LGGV+
Sbjct: 383 VLRHVDEKTARSVNGSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVS 442
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN-PVMLCAIDEAE----LGFSVWDPR 117
WA+LVAR CQLYPN PS LV RFF VY++W W N PV+LC I E F VW+P+
Sbjct: 443 WAILVARCCQLYPNFAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPK 502
Query: 118 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICE----EVELNKAQWS 173
N +D+ H +PIITPA+P MNS++NVS ST RV+ ++F I + + E++ +
Sbjct: 503 VNLQDRHHLLPIITPAFPSMNSTHNVSLSTKRVITEEFANAKRIFDIWDKKKEISWTEAL 562
Query: 174 ALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYG-------- 225
L L F S++++L++ + A N W GWVES++R L +ER G
Sbjct: 563 HLVLKPLDFTSFKHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGS 622
Query: 226 ------KLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI 279
+ P P + +P CA M + Q+ D+R + EF I
Sbjct: 623 TPKFEAAMTVRPIPCTF-SFQEPGWECASSMLVALN---FAQQPCVIDLRPAAGEFVDLI 678
Query: 280 NMY---MFWKPGMEICVSHIRRKQIPPYVFPE 308
N + +++ V H+RR Q+P YV +
Sbjct: 679 NQWPERAQLDGQIQLRVKHLRRSQLPAYVLKQ 710
>gi|239835858|gb|ACS29269.1| pap1 [Meyerozyma guilliermondii]
Length = 564
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/241 (45%), Positives = 160/241 (66%), Gaps = 6/241 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV DQIL+LVP V F LRC+K WA++R VY N+ GF GGV
Sbjct: 174 NLLKNIDENDMRALNGTRVTDQILQLVPKVTVFKHALRCIKLWAQQRAVYGNMFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV +++V +FF +YT W WP PV+L I++ L VW+PR
Sbjct: 234 AWAMLVARICQLYPNAVSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPH 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N+++ST +V+M++ + G+ + ++ LN W+ LF+ + F
Sbjct: 294 DRQHKMPVITPAYPSMCATHNINSSTQKVIMNELERGSELMAQISLNNKTWADLFQRHDF 353
Query: 182 FESYRNYLQVDIVAANA---DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 238
F Y+ YL I+AA ++ W G VES+LR L +E T G HPY ++ D
Sbjct: 354 FHRYKFYLC--IIAATEGTNEEHSKWSGMVESKLRILIQKLEL-TDGIALAHPYVKDFSD 410
Query: 239 T 239
+
Sbjct: 411 S 411
>gi|237833947|ref|XP_002366271.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
gi|211963935|gb|EEA99130.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
Length = 811
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/332 (41%), Positives = 186/332 (56%), Gaps = 30/332 (9%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
VL VDE T RS+NG RVAD ILKLVPN E F TLR +K WAK RG+YSNV G+LGGV+
Sbjct: 394 VLRHVDEKTARSVNGSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVS 453
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN-PVMLCAIDEAE----LGFSVWDPR 117
WA+LVAR CQLYPN PS LV RFF VY++W W N PV+LC I E F VW+P+
Sbjct: 454 WAILVARCCQLYPNFAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPK 513
Query: 118 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICE----EVELNKAQWS 173
N +D+ H +PIITPA+P MNS++NVS ST RV+ ++F I + + E++ +
Sbjct: 514 VNLQDRHHLLPIITPAFPSMNSTHNVSLSTKRVITEEFANAKRIFDIWDKKKEISWTEAL 573
Query: 174 ALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYG-------- 225
L L F S++++L++ + A N W GWVES++R L +ER G
Sbjct: 574 HLVLKPLDFTSFKHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGS 633
Query: 226 ------KLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI 279
+ P P + +P CA M + Q+ D+R + EF I
Sbjct: 634 TPKFEAAMTVRPIPCTF-SFQEPGWECASSMLVALN---FAQQPCVIDLRPAAGEFVDLI 689
Query: 280 NMY---MFWKPGMEICVSHIRRKQIPPYVFPE 308
N + +++ V H+RR Q+P YV +
Sbjct: 690 NQWPERAQLDGQIQLRVKHLRRSQLPAYVLKQ 721
>gi|224004590|ref|XP_002295946.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585978|gb|ACI64663.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 532
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 202/394 (51%), Gaps = 36/394 (9%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPN-------------VEHFCTTLRCLKFWAKRR 48
++L +DE +VRS+NG RVA +L + V++F TLR +K WA+
Sbjct: 146 TLLIGLDETSVRSINGVRVAQYLLSTLETTDKNRKNYDSATQVDNFRLTLRAVKEWARVH 205
Query: 49 GVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAID--- 105
G+YSNV GFLGGVNWA+LV VC+ YP+A S L+ FF+ ++ W+WP PV+L
Sbjct: 206 GLYSNVLGFLGGVNWAILVCWVCKRYPDAPASTLLQIFFKTFSTWKWPMPVLLSTQKQRP 265
Query: 106 -EAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE 164
E VWDP N RD H MPIITP YP MNSSYNV LR + D+F + +C +
Sbjct: 266 PEGVNNLPVWDPSSNFRDAKHLMPIITPCYPSMNSSYNVGEPQLRRLRDEFARASKLCSD 325
Query: 165 VELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTY 224
V +W LFE FF+ + NYLQVD VA N DD AW G E+R+R L +E +
Sbjct: 326 VAFGTKKWGVLFEWNEFFQQHANYLQVDTVATNEDDFRAWFGLCEARMRLLIAGLESPGF 385
Query: 225 GKLQCHPYP---HEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINM 281
G ++ +P+ H D +FF+ L+ + + D+ V +F IN
Sbjct: 386 G-VRAYPFAKFFHRREDGGGGNYIASFFIALR-----FANKVWKVDLAPLVTDFLTVINS 439
Query: 282 YMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRH---PRL------ASQQRSSENGNEYQ 332
+ +P M++ + + RK +P +VF + KR H P L +S R+ E+ E Q
Sbjct: 440 WDGREPTMDLMIRLVSRKDLPSFVF-DAEKREEHITKPVLKPNNQQSSANRTDEDDVENQ 498
Query: 333 TGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLS 366
+ K E + ISP K+ +S
Sbjct: 499 VNATTPSAKKNELDGSSTSSPSEFISPLKRTRIS 532
>gi|324975520|gb|ADY62700.1| PAPa [Candida orthopsilosis]
Length = 547
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 108/236 (45%), Positives = 156/236 (66%), Gaps = 2/236 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +RSLNG RV D+IL+LVP F LRC+K WA+ R VY NV GF GGV
Sbjct: 173 NLLKNLDERDLRSLNGTRVTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGV 232
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+L AR+CQLYPNAV +++V +FF +YT W WP PV+L AI++ L VW+PR
Sbjct: 233 AWAMLTARICQLYPNAVSAVIVEKFFNIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAH 292
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N+++ST +V++ + G++I + + + WS LF + F
Sbjct: 293 DRQHRMPVITPAYPSMCATHNITSSTQKVILQELTRGSSIMKSILEGEKSWSDLFARHDF 352
Query: 182 FESYRNYL-QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
F YR YL V + +A++ W G+VES+LRQL + +E T G HPY ++
Sbjct: 353 FHRYRFYLCVVAATSESAEEHHKWHGFVESKLRQLVIKLE-STEGVELAHPYVKDF 407
>gi|324975502|gb|ADY62684.1| PAPa [Candida orthopsilosis]
Length = 547
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 108/236 (45%), Positives = 155/236 (65%), Gaps = 2/236 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +RSLNG RV D+IL+LVP F LRC+K WA+ R VY NV GF GGV
Sbjct: 173 NLLKNLDERDLRSLNGTRVTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGV 232
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+L AR+CQLYPNAV +++V +FF +YT W WP PV+L AI++ L VW+PR
Sbjct: 233 AWAMLTARICQLYPNAVSAVIVEKFFNIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAH 292
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N+++ST +V++ + G+ I + + + WS LF + F
Sbjct: 293 DRQHRMPVITPAYPSMCATHNITSSTQKVILQELTRGSNIMKSILEGEKSWSDLFARHDF 352
Query: 182 FESYRNYL-QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
F YR YL V + +A++ W G+VES+LRQL + +E T G HPY ++
Sbjct: 353 FHRYRFYLCVVAATSESAEEHHKWHGFVESKLRQLVIKLE-STEGVELAHPYVKDF 407
>gi|313216525|emb|CBY37820.1| unnamed protein product [Oikopleura dioica]
Length = 643
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/396 (34%), Positives = 206/396 (52%), Gaps = 51/396 (12%)
Query: 1 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
+ +L +++E VRSLNGCRV D+IL LVPN+E F TLR +K WA+R+G+Y N GF+GG
Sbjct: 170 IEILRNLEEKCVRSLNGCRVTDEILHLVPNIETFRLTLRAVKLWARRKGIYKNALGFIGG 229
Query: 61 VNWALLVARVC-------------QLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA 107
V WA+LVAR C QLYPNA PS L+ +FF +++ W WP PV L ++A
Sbjct: 230 VCWAMLVARTCQVGLSCLEFLAIFQLYPNAAPSTLLEKFFLLFSKWDWPKPVFLKVPEDA 289
Query: 108 ELGFS--VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVM----MDQFQYGNTI 161
GF+ VWDPR N D++H MPIITPAYP NS++NVS STL VM D ++ I
Sbjct: 290 PPGFTHPVWDPRFNPLDRSHLMPIITPAYPHQNSTFNVSRSTLSVMKQEIKDAYETTKQI 349
Query: 162 CEEV----ELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTL 217
++ E N W+ LF FF Y++++ + A + W G VES +R+L
Sbjct: 350 LQKTPNPDEPNTRLWADLFTRTDFFNKYKHFIVLSATADQQEQYQKWIGLVESNIRKLVN 409
Query: 218 MIERDTYGKLQCHPYPHEYVDT---------SKPCAHCAFFMGLQRKPGEVVQEGQQFDI 268
+ER+ Y + H VD+ P C +F+GL EV ++
Sbjct: 410 DLERNEYILI-----AHVNVDSIELDPAEEGQSPRYVCRWFLGLSFHRCEV---KPNINL 461
Query: 269 RGSVEEF-------KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQ 321
++ F +S N Y P M + +++R + ++ PE RT + +
Sbjct: 462 TSDIQRFTDLLHQAAISHNNYT---PDMRVEARYVKRHNLVKFLTPE-LARTLKLSKSKE 517
Query: 322 QRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSI 357
R S+ + Q+ K+ ++ ES + E ++ +
Sbjct: 518 GRKSKTNAQNQSNGNTKKAEESESKNSQSKENKEKL 553
>gi|1256822|gb|AAC52586.1| poly(A) polymerase III [Mus musculus]
Length = 375
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 104/181 (57%), Positives = 134/181 (74%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 R 186
+
Sbjct: 372 K 372
>gi|134107007|ref|XP_777816.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260514|gb|EAL23169.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 643
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/422 (32%), Positives = 210/422 (49%), Gaps = 51/422 (12%)
Query: 3 VLNDVDEPTVRSLN-GCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
+L VD+ + RSLN G RV D IL LVP+V F T LR ++ WAKRRG+YSNV GF GGV
Sbjct: 179 ILRGVDDASQRSLNAGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGV 238
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA--ELGFSVWDPRKN 119
WALL AR+CQLYP A P+ +V +FF +Y W WP PV+L ID + SVW+P+ +
Sbjct: 239 AWALLTARICQLYPAAAPATIVGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLD 298
Query: 120 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV-ELNKAQWSALFEP 178
RRD+ H MP+ITPAYP M S++N+++ST+ ++ + I +E+ + + W LFE
Sbjct: 299 RRDQAHRMPVITPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKTPDSSWIPLFEK 358
Query: 179 YLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP------- 231
FF Y+ Y+QV A+ +D + W G VESR+R L +E +T + HP
Sbjct: 359 VDFFSMYKTYVQVVASASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGVNR 417
Query: 232 -----------------YPHEYVDTS---------KPCAHCAFFMGLQRKPGEVVQEGQQ 265
E +D + + +FF+GL+ + G+
Sbjct: 418 VFYCLTEEEQAAASQGELTAEMIDRTEEDVKNREHRKIYTKSFFIGLEIEKKSKETGGRV 477
Query: 266 FDIRGSVEEF-KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRS 324
++ ++F + N + + M + + +R ++P YVFP+G +++ QQ
Sbjct: 478 LNLFYPSKKFCAVCQNWDKYNEMEMSVILRPAKRSELPSYVFPDGMPKSKKKTKRQQQNG 537
Query: 325 SENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVE 384
S + G GP KR ++ P P+ V G++
Sbjct: 538 SGDAGMNDGSEG------------QGPSKRTKSEQTLINNFEPQQQLPNGVPVPNGADPV 585
Query: 385 PV 386
P+
Sbjct: 586 PL 587
>gi|19112154|ref|NP_595362.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe 972h-]
gi|26397523|sp|Q10295.1|PAP_SCHPO RecName: Full=Poly(A) polymerase pla1; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|1419256|emb|CAA56141.1| polymerase [Schizosaccharomyces pombe]
gi|4160340|emb|CAA22808.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe]
Length = 566
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 104/231 (45%), Positives = 149/231 (64%), Gaps = 1/231 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L V+E V SLNG RV DQIL+LVPN F LR +KFWA+RR +Y+NV GF GGV
Sbjct: 174 NLLKGVEERCVLSLNGTRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA++VAR+CQLYPNAV S++V++FFR+ W WP P++L I++ L +W+P+
Sbjct: 234 AWAMMVARICQLYPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPS 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
DK H MPIITPAYP M +++N++ ST +++ + I +++ + WSALF+ + F
Sbjct: 294 DKAHRMPIITPAYPSMCATHNITLSTQTIILREMVRAGEIADQIMVKALPWSALFQKHDF 353
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F Y++YL + A A+ L W G VES+LR L +E L HP+
Sbjct: 354 FHRYKHYLTITAAAKTAEAQLKWAGLVESKLRHLVTRLELVDAIAL-AHPF 403
>gi|341895922|gb|EGT51857.1| hypothetical protein CAEBREN_12609 [Caenorhabditis brenneri]
Length = 528
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/349 (38%), Positives = 200/349 (57%), Gaps = 23/349 (6%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D+ +VRSLNG RVA+++L+LVPN E FC TLR +K WAK GVYSN GF GG+
Sbjct: 183 NLLKNMDQESVRSLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGI 242
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCA-----IDEAELGFSVWDP 116
WALLVAR CQLYPNA PS LV + F V++ W +P+P++LC D L W
Sbjct: 243 TWALLVARTCQLYPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERADMLTLDNLCWG- 301
Query: 117 RKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF 176
+N D+ H MPIITPA+P NS++NVS ST+ V+ + IC ++ K W LF
Sbjct: 302 -RNHADRFHLMPIITPAFPEQNSTHNVSRSTMEVIKKEMADALVICNDIFDGKCDWKFLF 360
Query: 177 EPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
E F+ Y++++ + + A + ++ G++ESR RQL ER+ G H P +
Sbjct: 361 EEVNFYSQYKHFVVMKLDAKKEETENSYGGFLESRFRQLIGAFERNR-GIKMAHLNPKKC 419
Query: 237 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG---MEICV 293
TSK A +F+GL+ +VV + D+ ++ FK ++N+ G +E+ +
Sbjct: 420 QPTSK--AQSLWFIGLEF--DDVV---KNMDLTREIDNFKWNLNVQAKQIAGFEEVELDI 472
Query: 294 SHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKD 342
S+ +R Q+ Y+ P K+ R + S+E+ E GLKRK D
Sbjct: 473 SYAKRSQLIKYMPPAELKKG---RFFVAKGSAEDNKE--NAGGLKRKCD 516
>gi|341899970|gb|EGT55905.1| hypothetical protein CAEBREN_16296 [Caenorhabditis brenneri]
Length = 526
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/347 (38%), Positives = 201/347 (57%), Gaps = 23/347 (6%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D+ +VRSLNG RVA+++L+LVPN E FC TLR +K WAK GVYSN GF GG+
Sbjct: 181 NLLKNMDQKSVRSLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGI 240
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCA-----IDEAELGFSVWDP 116
WA+LVAR CQLYPNA PS LV + F V++ W +P+P++LC D L W
Sbjct: 241 TWAILVARTCQLYPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERSDMLALDNLCWG- 299
Query: 117 RKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF 176
+N D+ H MPIITPA+P NS++NVS ST+ V+ + IC ++ K+ W LF
Sbjct: 300 -RNHADRFHLMPIITPAFPEQNSTHNVSRSTMEVIKKEMADALVICNDIFEGKSDWKFLF 358
Query: 177 EPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
E F+ Y++++ + + A + ++ G++ESRLR L ER+ KL H P +
Sbjct: 359 EEVNFYSQYKHFVVMKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKL-AHLNPKKC 417
Query: 237 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG---MEICV 293
TSK A +F+GL+ EVV + D+ ++ FK ++N+ G +E+ +
Sbjct: 418 QPTSK--AQSIWFIGLEFD--EVV---KNMDLTREIDNFKWNLNVQAKQIAGFEEVELDI 470
Query: 294 SHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRK 340
S+++R Q+ Y+ K+ R + SSE+ E GLKRK
Sbjct: 471 SYVKRSQLIKYLPAAELKKG---RFFVAKGSSEDNKE--NAGGLKRK 512
>gi|196011858|ref|XP_002115792.1| hypothetical protein TRIADDRAFT_30173 [Trichoplax adhaerens]
gi|190581568|gb|EDV21644.1| hypothetical protein TRIADDRAFT_30173, partial [Trichoplax
adhaerens]
Length = 405
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/243 (46%), Positives = 153/243 (62%), Gaps = 8/243 (3%)
Query: 12 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 71
VRSLNGCRV D IL LVPN + F T LR +K WAKRRG+YSN G+LGGV+WA+LVAR C
Sbjct: 164 VRSLNGCRVTDAILSLVPNADSFRTALRFIKLWAKRRGIYSNALGYLGGVSWAMLVARTC 223
Query: 72 QLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIIT 131
QLYPNAV + +V +FF V+ W W PV+L + E++L + W P N D++ M IIT
Sbjct: 224 QLYPNAVAATIVQKFFLVFNQWNWQQPVLLTRMVESDLNLNGWTP-SNFSDRSQLMQIIT 282
Query: 132 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 191
P YP NS++NVS ST +++++ + G IC E+ L A+W+ FEP FF Y++Y+ +
Sbjct: 283 PVYPHQNSTFNVSKSTKTILLEEIERGLKICNEIFLRNAKWTDAFEPADFFGRYKHYIVL 342
Query: 192 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCA------H 245
A + D+ W G VES+LR+L L +ER+ Y + H P Y + A H
Sbjct: 343 TAKATSEDNYKEWIGLVESKLRKLVLTLERNEYFDI-VHINPKSYPGDPQRYAFWFKLLH 401
Query: 246 CAF 248
C F
Sbjct: 402 CIF 404
>gi|353242336|emb|CCA73989.1| probable PAP1-poly(A) polymerase [Piriformospora indica DSM 11827]
Length = 624
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 151/438 (34%), Positives = 216/438 (49%), Gaps = 75/438 (17%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D+ VRSLNG R D IL+LVPNV F LR +K+WA+RR +YSNV+GFLGG+
Sbjct: 176 SLLKNLDDKCVRSLNGSRSTDAILRLVPNVHVFRDALRAIKYWAQRRAIYSNVSGFLGGI 235
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WALLVARVCQLYPN + +V RFF + +MW+WP PV+L I+E L VW+P+
Sbjct: 236 AWALLVARVCQLYPNGNAATIVRRFFLIMSMWKWPQPVVLKKIEEGNLNMRVWNPKIYPS 295
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP M S++NV T ++ ++ + G + + +A+W+ LF + F
Sbjct: 296 DRAHKMPIITPAYPSMCSTHNVMNCTFEIIQEELKRGQELIVRITNGEAKWADLFTKHTF 355
Query: 182 FESYRNYLQVDIVAANADDLLAWKGW---VESRLRQLTLMIERDTYGKL-QCHPYP---- 233
F Y+ YLQ + A+ DD K W VES+ RQL +E G L + HP+
Sbjct: 356 FSQYQYYLQ---IIASCDDEEIQKKWSKTVESKGRQLVGKLEES--GTLARVHPFVKGFN 410
Query: 234 --------HEYVD-----------------------TSKPCAH-CAFFMGLQ--RKPGEV 259
E+ D + H F++G++ R P V
Sbjct: 411 KTYYTVTMQEHADIVLGNVPPAVANRTEEEAKQIESNERQVIHTTTFYIGMEITRPPPSV 470
Query: 260 VQEG-QQFDIRGSVEEF-KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPR 317
G ++ DI EF K + + ++ M I V HI+ +P VF EG R R
Sbjct: 471 TTTGPRKLDISIPTSEFMKTARSWELYQNDIMGIAVRHIKNSALPDEVF-EGAPRPR--- 526
Query: 318 LASQQRSSENGNEYQTGSGLKR-KKDPESVDQDGPE----KRQSISPQKQDSLSPDHLAP 372
GLKR K +D +G + +R S Q ++P L P
Sbjct: 527 -----------------KGLKRVAKSKVPIDGEGAQATKRRRPSDDGQTPTPVNPQSLVP 569
Query: 373 SSVRSGTGSNVEPVIPDK 390
+ + + S+ P K
Sbjct: 570 AQLPAIPASDFAQAGPPK 587
>gi|358370159|dbj|GAA86771.1| poly(A) polymerase Pap [Aspergillus kawachii IFO 4308]
Length = 598
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/389 (33%), Positives = 194/389 (49%), Gaps = 64/389 (16%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE VRSLNG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV W
Sbjct: 182 LRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+LVARVCQLYP A S++V +FFR+ W WP PV+L I++ L VW+P+ D+
Sbjct: 242 AMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDR 301
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++NVS ST V++ + Q G I +++ L + +W LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATHNVSMSTKAVILRELQRGGDIVDKIFLKQLRWEDLFARHTFFT 361
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH-------- 234
+ Y+ YL + + + W G VES++R L ++R + HP+P
Sbjct: 362 KDYKYYLSITASSRTKEAESVWSGLVESKIRHLVGALDRKATIAI-AHPFPKGFERVHRV 420
Query: 235 -----------------------EYVDTSKPCAHCA------------------------ 247
E D K AH A
Sbjct: 421 SSEEEIEAVKTGSTKYQDKGTKTETTDEMKDAAHQAAAQNGAENTDVAAAENKPVDDTHV 480
Query: 248 -----FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQI 301
+++GL+ KP E + DI + FK + + ++PG+ ++ ++H+R +
Sbjct: 481 MYTTTYYIGLELKPLE-PGASRSLDISTDAQIFKSTCTSWPGYQPGINDLAITHVRNFDL 539
Query: 302 PPYVFPEGYKRTRHPRLASQQRSSENGNE 330
P VF G R P+ +++ +G +
Sbjct: 540 PEDVFQPGETRPTRPKKKIVKKAEISGQK 568
>gi|344231415|gb|EGV63297.1| Poly(A) polymerase PAPalpha [Candida tenuis ATCC 10573]
Length = 560
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 157/239 (65%), Gaps = 2/239 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LRC+K WA+ R VY NV GF GGV
Sbjct: 174 NLLRNLDERDMRALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQARAVYGNVFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA++VAR+CQLYPNAV +++V +FF +YT W WP PV+L I++ L VW+PR
Sbjct: 234 AWAMMVARICQLYPNAVGAVIVDKFFNIYTKWNWPQPVLLKPIEDGPLQVKVWNPRLYTN 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP M +++N+++ST +V++ + G I +++L K WS LF+ + F
Sbjct: 294 DRNHRMPIITPAYPSMCATHNITSSTQKVILSELVKGVDIVGDIKLGKRTWSDLFQRHDF 353
Query: 182 FESYRNYLQVDI-VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 239
F Y+ YL + + AN ++ W G+VES+LR L +E T G HPY ++ D+
Sbjct: 354 FFRYKFYLCIVVGTKANEEEHSKWSGFVESKLRLLVQKLEA-TSGIEIAHPYVKDFNDS 411
>gi|121700911|ref|XP_001268720.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
gi|119396863|gb|EAW07294.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
Length = 598
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 194/394 (49%), Gaps = 72/394 (18%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE VRSLNG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV W
Sbjct: 182 LRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+LVARVCQLYP A S++V +FFR+ W WP PV+L I++ L VW+P+ D+
Sbjct: 242 AMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDR 301
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++NVS ST V++ + Q G I +++ L + W+ LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATHNVSMSTKAVILRELQRGGDIVDKIFLKQMTWNDLFARHSFFT 361
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH-------- 234
+ Y+ YL + + + W G VES++R L ++R + HP+P
Sbjct: 362 QDYKYYLSITASSKTKEAESVWSGLVESKIRHLVGALDRKNTIAV-AHPFPKGFERVHLV 420
Query: 235 -----------------------EYVDTSKPCAHCA------------------------ 247
E D + AH A
Sbjct: 421 SSEEEAEAVKNGSTKYQDKGTKTETTDETNDIAHQAAAQNGVENAEVEPVGQKENGDSRT 480
Query: 248 -----FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQI 301
+++GL+ KP E + DI + FK + + ++PG+ ++ ++H+R +
Sbjct: 481 IYTTTYYIGLELKPLE-PGASRSLDISTDAQIFKSTCTSWAGYQPGINDLAITHVRNFDL 539
Query: 302 PPYVFPEGYKR--------TRHPRLASQQRSSEN 327
P VF G R R P +Q+R E+
Sbjct: 540 PDDVFQPGETRPTRPKKKIIRRPEAGAQKRGIES 573
>gi|341895839|gb|EGT51774.1| hypothetical protein CAEBREN_25710 [Caenorhabditis brenneri]
Length = 527
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 137/349 (39%), Positives = 201/349 (57%), Gaps = 23/349 (6%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D+ +VRSLNG RVA+++L+LVPN E FC TLR +K WAK GVYSN GF GG+
Sbjct: 182 NLLKNMDQESVRSLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGI 241
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCA-----IDEAELGFSVWDP 116
WALLVAR CQLYPNA PS LV + F V++ W +P+P++LC D L W
Sbjct: 242 TWALLVARTCQLYPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERPDMLTLDNLCWG- 300
Query: 117 RKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF 176
+N D+ H MPIITPA+P NS++NVS ST+ V+ + IC +V K W LF
Sbjct: 301 -RNHADRFHLMPIITPAFPEQNSTHNVSRSTMEVIKKEMADALVICNDVFEGKCDWKHLF 359
Query: 177 EPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
E F+ Y++++ + + A + ++ G++ESRLR L ER+ KL H P +
Sbjct: 360 EELNFYSQYKHFVVLKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKL-AHLNPKKC 418
Query: 237 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG---MEICV 293
TSK A +F+GL+ EVV + D+ ++ FK ++N+ PG +E+ +
Sbjct: 419 QPTSK--AQSLWFIGLEF--DEVV---KNMDLTREIDNFKWNLNVQAKQIPGFEDVELDI 471
Query: 294 SHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKD 342
S+++R Q+ Y+ K+ R + S + N+ G LKRK D
Sbjct: 472 SYVKRSQLIKYLPAAELKKGRF----HVAKGSSDDNKENAGV-LKRKCD 515
>gi|224141615|ref|XP_002324162.1| predicted protein [Populus trichocarpa]
gi|222865596|gb|EEF02727.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 105/116 (90%), Positives = 110/116 (94%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDE TVRSLNGCRVADQILKLVPNVEHF TTLRCLKFWAKRRGVYSNVTGFLGGV
Sbjct: 172 SVLYEVDEQTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGV 231
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 117
NWALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLC+I+E +LGF VWDPR
Sbjct: 232 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEEDDLGFPVWDPR 287
>gi|37595378|gb|AAQ94575.1| polyA polymerase alpha [Danio rerio]
Length = 386
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 104/187 (55%), Positives = 134/187 (71%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D +RSLNGCRV D+IL LVPN+E+F TLR +K WAKR +YSN+ GFLGGV+
Sbjct: 188 LLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVS 247
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQLYPNAV + LV +FF V++ W WPNPV+L ++ L VWDPR D
Sbjct: 248 WAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSD 307
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS+YNVS ST +M+++F+ G I +E+ NKA WS LFE FF
Sbjct: 308 RYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFF 367
Query: 183 ESYRNYL 189
+ Y+ L
Sbjct: 368 QKYKYVL 374
>gi|1709575|sp|P51006.1|PAPO3_XENLA RecName: Full=Poly(A) polymerase type 3; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|643648|gb|AAC59747.1| poly(A) polymerase type 3, partial [Xenopus laevis]
Length = 400
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 106/193 (54%), Positives = 139/193 (72%), Gaps = 1/193 (0%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN++ F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 189 NLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 248
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 249 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 308
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L KA+WS LF+ FF+ Y
Sbjct: 309 LMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLLKAEWSKLFDAPNFFQKY 368
Query: 186 RNYLQVDIVAANA 198
+ Y+ +++A A
Sbjct: 369 K-YVFYNLLAMFA 380
>gi|755872|gb|AAA64708.1| poly(A) polymerase [Xenopus laevis]
Length = 394
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 106/193 (54%), Positives = 139/193 (72%), Gaps = 1/193 (0%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN++ F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 189 NLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 248
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H
Sbjct: 249 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 308
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L KA+WS LF+ FF+ Y
Sbjct: 309 LMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLLKAEWSKLFDAPNFFQKY 368
Query: 186 RNYLQVDIVAANA 198
+ Y+ +++A A
Sbjct: 369 K-YVFYNLLAMFA 380
>gi|50925416|gb|AAH79525.1| Papolb protein [Danio rerio]
Length = 435
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 104/187 (55%), Positives = 134/187 (71%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D +RSLNGCRV D+IL LVPN+E+F TLR +K WAKR +YSN+ GFLGGV+
Sbjct: 188 LLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVS 247
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQLYPNAV + LV +FF V++ W WPNPV+L ++ L VWDPR D
Sbjct: 248 WAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSD 307
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS+YNVS ST +M+++F+ G I +E+ NKA WS LFE FF
Sbjct: 308 RYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFF 367
Query: 183 ESYRNYL 189
+ Y+ L
Sbjct: 368 QKYKYVL 374
>gi|38541302|gb|AAH62850.1| Papolb protein [Danio rerio]
Length = 436
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 104/187 (55%), Positives = 134/187 (71%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D +RSLNGCRV D+IL LVPN+E+F TLR +K WAKR +YSN+ GFLGGV+
Sbjct: 188 LLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVS 247
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQLYPNAV + LV +FF V++ W WPNPV+L ++ L VWDPR D
Sbjct: 248 WAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSD 307
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS+YNVS ST +M+++F+ G I +E+ NKA WS LFE FF
Sbjct: 308 RYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFF 367
Query: 183 ESYRNYL 189
+ Y+ L
Sbjct: 368 QKYKYVL 374
>gi|159154998|gb|AAI54504.1| Papolb protein [Danio rerio]
Length = 436
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 104/187 (55%), Positives = 134/187 (71%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D +RSLNGCRV D+IL LVPN+E+F TLR +K WAKR +YSN+ GFLGGV+
Sbjct: 188 LLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVS 247
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQLYPNAV + LV +FF V++ W WPNPV+L ++ L VWDPR D
Sbjct: 248 WAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSD 307
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS+YNVS ST +M+++F+ G I +E+ NKA WS LFE FF
Sbjct: 308 RYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFF 367
Query: 183 ESYRNYL 189
+ Y+ L
Sbjct: 368 QKYKYVL 374
>gi|242773312|ref|XP_002478214.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
gi|218721833|gb|EED21251.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
Length = 599
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 188/376 (50%), Gaps = 64/376 (17%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +D+ VRSLNG RV DQIL+LVP + F LR +K WA+RR +YSN+ GF GGV W
Sbjct: 182 LRGLDDKEVRSLNGTRVTDQILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+LVARVCQLYP A S++V +FFR+ T W WP PV+L I++ L VW+P+ D+
Sbjct: 242 AMLVARVCQLYPQATGSVIVGKFFRIMTKWAWPQPVLLKPIEDGPLQIKVWNPKIYHTDR 301
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++N+S ST V++ + Q G I +++ + W+ LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATHNISLSTKAVILRELQRGGDIVDKIFAKQLTWNDLFTRHTFFS 361
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH-------- 234
+ Y+ YLQ+ + + W G VES+LR L ++R + HP+P
Sbjct: 362 KDYKYYLQITASSKTKEADSVWSGLVESKLRHLVGALDRKNIIAV-AHPFPKGFERIHVV 420
Query: 235 -----------------------EYVDTSKPCAHCA------------------------ 247
E D +K AH A
Sbjct: 421 KDDAEAEQVKNGSTKYQAQGTKTETTDQTKDPAHTAAAENGAQDIQVPDPETKGAVDSRT 480
Query: 248 -----FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQI 301
+++GL+ KP E + DI FK + + ++ G+ ++ ++H+R +
Sbjct: 481 IYTTTYYIGLELKPLE-PGASRSLDISTDANIFKSTCTSWQGFQEGINDLSITHVRSFDL 539
Query: 302 PPYVFPEGYKRTRHPR 317
P VF G R P+
Sbjct: 540 PDDVFEPGETRPVRPK 555
>gi|406606978|emb|CCH41700.1| poly(A) polymerase [Wickerhamomyces ciferrii]
Length = 572
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 108/233 (46%), Positives = 154/233 (66%), Gaps = 4/233 (1%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +RSLNG RV D+IL+LVP F +LR +K WA+RR +Y+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRSLNGTRVTDEILQLVPKPVVFKLSLRAIKLWAQRRAIYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV S++VS+FF + T W WP PV+L I++ L VW+PR +
Sbjct: 235 AWAMLVARICQLYPNAVSSVIVSKFFHILTQWNWPQPVLLKPIEDGPLQVRVWNPRVYPQ 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N++ ST +V++++ Q G+ I ++ +K QW LF + F
Sbjct: 295 DRQHRMPVITPAYPSMCATHNITASTQKVILNELQRGSLIMNDIISHKKQWEDLFVKHDF 354
Query: 182 FESYRNYLQVDIVAANADD--LLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F Y+ YL + I DD L W G VES+LR L +E + G HPY
Sbjct: 355 FYKYKFYLNI-IAFTRGDDEQHLKWSGLVESKLRLLVQKLE-NFQGINLAHPY 405
>gi|342321329|gb|EGU13263.1| Endochitinase [Rhodotorula glutinis ATCC 204091]
Length = 703
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 142/435 (32%), Positives = 212/435 (48%), Gaps = 66/435 (15%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D+ +RSLNG RV D++L+LVP+V F LR +K WA++R +Y NV GF GGV WA+
Sbjct: 178 NIDDRCLRSLNGSRVTDEMLRLVPDVPVFREALRTIKLWAQQRAIYGNVMGFCGGVAWAM 237
Query: 66 LVARVCQLYPNAVPSMLVSR--------------------FFRVYTMWRWPNPVMLCAID 105
LVAR+CQLYP ++SR FF + W+WP PV+L I+
Sbjct: 238 LVARICQLYPKGCVGSIISRCVMCFQLRHVRSSPTGSLRRFFIIMHQWQWPAPVLLKPIE 297
Query: 106 EAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV 165
E L VW+P+ D++H MPIITPAYP M S++NV+ ST ++M +F+ I ++V
Sbjct: 298 EGPLQVRVWNPKLYPSDRSHRMPIITPAYPSMCSTHNVTLSTQQIMTAEFKRAADIVDKV 357
Query: 166 ELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER-DTY 224
+ A+WS LF+P+ FF YR YLQ+ + +AD L W G VESR+RQL + +E DT
Sbjct: 358 FVGSAKWSELFQPHDFFSKYRYYLQITASSGSADVQLKWSGTVESRIRQLVMKLEYVDTL 417
Query: 225 GKLQCHPYPHEYVDTSKPCAH----------------------------------CAFFM 250
L HP+ + D C + F++
Sbjct: 418 --LLAHPFVKSF-DRVNYCINEEEQRAVSIGEVPAAVDKRTEQDLIAGQGGTVYTTTFYI 474
Query: 251 GLQ--RKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKP-GMEICVSHIRRKQIPPYVF- 306
GLQ RKP + ++ DI EF + M+ + P M + V +I+ +P YV
Sbjct: 475 GLQIERKPAG-DKGPRKLDISYPTNEFTKLVKMWDSYDPDSMGVIVRYIKSTALPAYVHA 533
Query: 307 ---PEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQD 363
PE K R +++ + N + + D + + R S +
Sbjct: 534 GREPEPPKTGGVKRAKTKKANGSNAATAASPALANAATDDSDAEHLNKKHRASSFVPENA 593
Query: 364 SLSPDHLAPSSVRSG 378
+ +P L P V +G
Sbjct: 594 TPTPAGLPPVPVENG 608
>gi|170051830|ref|XP_001861944.1| poly a polymerase [Culex quinquefasciatus]
gi|167872900|gb|EDS36283.1| poly a polymerase [Culex quinquefasciatus]
Length = 631
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 109/225 (48%), Positives = 147/225 (65%), Gaps = 1/225 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D VRSLNGCR D+IL+LVPN+++F LR +K WAK+ G+YSN G+ GGV+
Sbjct: 396 LLKNLDPKLVRSLNGCRATDEILRLVPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVS 455
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
W +LVAR CQL PN V + V +FF V+ W+WP PV L D LGF VWD R N +D
Sbjct: 456 WGMLVARTCQL-PNVVAATQVHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQD 514
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS+++VS+ST +VM+++F G I +E+ L KA W LFE FF
Sbjct: 515 RFHLMPIITPAYPQPNSTFHVSSSTRKVMLNEFNSGMQITDEIMLGKAGWDKLFEAPSFF 574
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL 227
YR + + + + N DD L W VES++R L +ER + L
Sbjct: 575 FKYRYVIVLLVTSNNTDDHLEWCEMVESKIRYLIQNLERILHINL 619
>gi|430811842|emb|CCJ30698.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 639
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 104/231 (45%), Positives = 154/231 (66%), Gaps = 1/231 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +V+E V SLNG RV D+IL+LVPN F LR +K WA++R +YSNV GF GGV
Sbjct: 230 NLLKNVEERCVLSLNGTRVTDEILRLVPNPTIFKHALRAIKLWAQQRAIYSNVMGFPGGV 289
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV ++++++FFR+ + W+WP PV+L I++ L VW+P+ +
Sbjct: 290 AWAMLVARICQLYPNAVSAVVIAKFFRILSQWKWPQPVLLKPIEDGPLQVRVWNPKIYKG 349
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP M S++N++ ST +V++++ I +++ WS LF + F
Sbjct: 350 DQAHRMPIITPAYPSMCSTHNITESTQKVIINEMNRAGDIADKILNGTLPWSTLFAKHTF 409
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F Y+ YL + + +A+ L W G VES++RQL L +E KL HP+
Sbjct: 410 FHQYKYYLVIVAASKSAEMQLKWSGLVESKVRQLVLRLEYVDEIKL-AHPF 459
>gi|255713432|ref|XP_002552998.1| KLTH0D06380p [Lachancea thermotolerans]
gi|238934378|emb|CAR22560.1| KLTH0D06380p [Lachancea thermotolerans CBS 6340]
Length = 594
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 154/233 (66%), Gaps = 4/233 (1%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LR +K WA+RR VY+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILQLVPKPTSFKIALRAIKLWAQRRAVYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA +++++RFF + T W WP PV+L I++ L VW+PR +
Sbjct: 235 AWAMLVARICQLYPNACSAVILTRFFHILTKWNWPQPVLLKPIEDGPLQVRVWNPRIYAQ 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MP+ITPAYP M +++N+S ST +V++ + + G I E+ NK WS LF+ + F
Sbjct: 295 DRSHKMPVITPAYPSMCATHNISESTKKVILAELERGAQISSEIFSNKKTWSDLFQKHDF 354
Query: 182 FESYRNYLQVDI-VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQ-CHPY 232
F Y+ YL V + +++ L W G VES+LR L +E T G + HP+
Sbjct: 355 FYKYKFYLTVMASTSGSSEQHLKWSGLVESKLRLLVQKLE--TLGGINLAHPF 405
>gi|448081751|ref|XP_004194965.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
gi|359376387|emb|CCE86969.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
Length = 558
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/234 (45%), Positives = 152/234 (64%), Gaps = 6/234 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +RSLNG RV D+IL LVP F LRC+K WA++R +Y+NV GF GGV
Sbjct: 174 NLLRNIDEKDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV +++V +FF +Y W WP PV+L I++ L VW+PR
Sbjct: 234 AWAMLVARICQLYPNAVSAVIVEKFFHIYAQWSWPQPVLLKQIEDGPLQVRVWNPRLYPH 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N+++ST +++M +F+ G I ++ N W+ L + F
Sbjct: 294 DRQHRMPVITPAYPSMCATHNITSSTQKIIMKEFRRGIDIMNQINGNNKTWANLLARHTF 353
Query: 182 FESYRNYLQVDIVAANA---DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F +Y+ YL IVAA ++ + W G VESRLR L +E T G HPY
Sbjct: 354 FHNYKFYLC--IVAATKGPYEEHIKWSGMVESRLRILVQKLEL-TEGIELAHPY 404
>gi|50304345|ref|XP_452122.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641254|emb|CAH02515.1| KLLA0B13255p [Kluyveromyces lactis]
Length = 598
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/236 (43%), Positives = 155/236 (65%), Gaps = 2/236 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +VDE +R+LNG RV D+IL+LVPN F LR +K WAKRR VY+NV GF GGV
Sbjct: 175 NLLRNVDEKDLRALNGTRVTDEILELVPNKTSFKIALRAIKIWAKRRAVYANVFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+ V R+CQLYPNA ++++S+FF++ + W+WP PV+L I++ L VW+P+ +
Sbjct: 235 AWAMFVVRICQLYPNACSAVIISKFFQILSRWKWPQPVLLKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MP+ITPAYP M +++N+S ST +V++ + Q G + +++ N+ W LF+ + F
Sbjct: 295 DRSHKMPVITPAYPSMCATHNISESTKKVILSELQRGVEVTQKIFSNELSWEDLFKKHDF 354
Query: 182 FESYRNYLQVDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
F Y+ YL V + +D+ L W G+VES+LR L +E G HP+ Y
Sbjct: 355 FFKYKFYLTVMVSTKGSDEQHLKWSGFVESKLRLLVQKLEV-LPGINLAHPFIEPY 409
>gi|67517193|ref|XP_658478.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
gi|40746747|gb|EAA65903.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
gi|259488841|tpe|CBF88615.1| TPA: poly(A) polymerase Pap (AFU_orthologue; AFUA_1G15340)
[Aspergillus nidulans FGSC A4]
Length = 601
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 188/376 (50%), Gaps = 65/376 (17%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE VRSLNG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV W
Sbjct: 184 LRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 243
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+LVARVCQLYP A S++V +FFR+ W WP PV+L I++ L VW+P+ D+
Sbjct: 244 AMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDR 303
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 183
H MPIITPAYP M +++N+S ST V++ + Q G I +++ +A W+ LF+ + FF
Sbjct: 304 FHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDIVDKIWAKQATWNDLFKKHSFFT 363
Query: 184 S-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH-------- 234
+ Y+ YL V + + W G VES++R L ++R + HP+P
Sbjct: 364 NDYKYYLGVTASSRTKEAESVWSGLVESKVRHLVGALDRKPTIAV-AHPFPKGFERIHIV 422
Query: 235 -----------------------EYVDTSKPCAHCA------------------------ 247
E D K AH A
Sbjct: 423 SNEEEAEAVKNGSLKYQDKGTKTETTDEIKDAAHQAAAQSGREDTDVPGAANNTAANDGR 482
Query: 248 ------FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQ 300
+++GL+ KP E + DI + FK + ++PG+ ++ ++H+R
Sbjct: 483 IIYTTTYYIGLELKPVE-PGASRSLDISSDAQFFKSMCTSWPGYQPGINDLSITHVRNYD 541
Query: 301 IPPYVFPEGYKRTRHP 316
+P +F EG R P
Sbjct: 542 LPEDLFQEGEARPTRP 557
>gi|448086239|ref|XP_004196053.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
gi|359377475|emb|CCE85858.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
Length = 558
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/234 (45%), Positives = 152/234 (64%), Gaps = 6/234 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +RSLNG RV D+IL LVP F LRC+K WA++R +Y+NV GF GGV
Sbjct: 174 NLLRNIDEKDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV +++V +FF +Y W WP PV+L I++ L VW+PR
Sbjct: 234 AWAMLVARICQLYPNAVSAVVVEKFFHIYAQWSWPQPVLLKQIEDGPLQVRVWNPRLYPH 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N+++ST +++M +F+ G I ++ N W+ L + F
Sbjct: 294 DRQHRMPVITPAYPSMCATHNITSSTQKIIMKEFRRGIDIMNQISGNNKTWANLLARHTF 353
Query: 182 FESYRNYLQVDIVAANA---DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F +Y+ YL IVAA ++ + W G VESRLR L +E T G HPY
Sbjct: 354 FHNYKFYLC--IVAATKGSYEEHIKWSGMVESRLRILVQKLEL-TEGIELAHPY 404
>gi|45185228|ref|NP_982945.1| ABL002Cp [Ashbya gossypii ATCC 10895]
gi|44980886|gb|AAS50769.1| ABL002Cp [Ashbya gossypii ATCC 10895]
gi|374106148|gb|AEY95058.1| FABL002Cp [Ashbya gossypii FDAG1]
Length = 598
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/239 (44%), Positives = 152/239 (63%), Gaps = 2/239 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LR +K WA+RR VY+NV GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPTAFKIALRAIKLWAQRRAVYANVFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA +++V+RFF + T W WP PV+L I++ L VW+P+
Sbjct: 235 AWAMLVARICQLYPNACSAVIVARFFHILTRWSWPQPVLLKPIEDGPLQVRVWNPKIYAN 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M S++N+ ST +V++++ Q G + ++ NK W LF+ + F
Sbjct: 295 DRLHKMPVITPAYPSMCSTHNICESTKKVILNELQRGVEVTTDIFTNKKTWGDLFQKHDF 354
Query: 182 FESYRNYLQVDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 239
F Y+ YL V +D+ L W G VES+LR L L +E + G HPY + T
Sbjct: 355 FYKYKFYLTVMASTKGSDEQHLKWSGLVESKLRLLVLKLEVLS-GINLAHPYTKPFEST 412
>gi|190347092|gb|EDK39304.2| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
6260]
Length = 554
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/238 (43%), Positives = 154/238 (64%), Gaps = 2/238 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +RSLNG RV D+IL LVP F LRC+K WA++R +Y+N+ GF GGV
Sbjct: 174 NLLRNLDEKDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANIFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+L AR+CQLYPNAV +++V +FF +Y+ W WP PV+L I++ L VW+PR
Sbjct: 234 AWAMLTARICQLYPNAVSAVIVEKFFHIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYPH 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MP+ITPAYP M +++N+++ST +++ +F+ G I ++ + K +W LF + F
Sbjct: 294 DRSHRMPVITPAYPSMCATHNITSSTQAIIVSEFKRGAEIMNDISIGKKEWGDLFARHEF 353
Query: 182 FESYRNYL-QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 238
F Y+ YL V +A++ L W G VES+LR L +E T G HPY + D
Sbjct: 354 FFRYKFYLCVVASTKGSAEEHLKWSGMVESKLRILVQKLEL-TEGITIAHPYVKTFED 410
>gi|255930343|ref|XP_002556731.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581344|emb|CAP79117.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 590
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/398 (33%), Positives = 191/398 (47%), Gaps = 77/398 (19%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE VRSLNG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV W
Sbjct: 182 LRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+LVARVCQLYP A S++V +FFR+ W WP PV+L I++ L VW+P+ D+
Sbjct: 242 AMLVARVCQLYPQATGSVIVGKFFRIMNKWNWPQPVLLKQIEDGPLQIKVWNPKIYHGDR 301
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++N+S ST V++ + Q G + +++ + + W LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDMVDKIFMKQLSWHDLFARHTFFT 361
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY------ 236
Y+ YL + + + W G VES+LR L ++R + HP+P +
Sbjct: 362 HDYKYYLSITASSKTKEAESVWSGLVESKLRHLVGALDRKPIIAV-AHPFPKGFERVHLI 420
Query: 237 -------------------------VDTSKPCAHCA------------------------ 247
D +K AH A
Sbjct: 421 KNEQDMEAVKNGSTQHQAKGTKTAMTDETKDAAHQAAVQNTLENAEVPGPAEGTVEGTVD 480
Query: 248 ----------FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG-----MEIC 292
+++GL+ KP E Q + DI + FK + + PG ME+
Sbjct: 481 NEGQTVYTTTYYIGLELKPLEPGQ-SRSLDISTDSQIFKSTCTSW----PGYQEEVMELA 535
Query: 293 VSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNE 330
V+H+R +P VF G R P+ +RS G +
Sbjct: 536 VTHVRSFDLPDDVFQPGETRASRPKKKVTKRSETAGQK 573
>gi|367008660|ref|XP_003678831.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
gi|359746488|emb|CCE89620.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
Length = 582
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/277 (40%), Positives = 173/277 (62%), Gaps = 12/277 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LR +K WA+RR +Y+NV GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPIVFRIALRAIKLWAQRRAIYANVFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA +++++RFF++ + W+WP PV+L I++ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MP+ITPAYP M +++N++ ST +V++ + G I ++ NK W+ LF+ + F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKKVILGELGRGIRITNDIFTNKKTWADLFQRHTF 354
Query: 182 FESYRNYLQVDIVAANAD--DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 239
F Y+ YL V + A N D L W G VES++R L L +E T K+ HPY
Sbjct: 355 FHEYKFYLTV-MAATNGDSEQHLKWSGMVESKVRLLVLKLEALTGIKI-AHPY------- 405
Query: 240 SKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFK 276
+KP A++ + + ++V + ++EFK
Sbjct: 406 TKPF-ETAYYYHNEEERKKIVDNYGTYKTEDVLKEFK 441
>gi|119494846|ref|XP_001264225.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
gi|119412387|gb|EAW22328.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
Length = 603
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/372 (33%), Positives = 187/372 (50%), Gaps = 65/372 (17%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE VRSLNG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV W
Sbjct: 182 LRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+LVARVCQLYP+A S++V +FFR+ W WP PV+L I++ L VW+P+ D+
Sbjct: 242 AMLVARVCQLYPHATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDR 301
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++N+S ST V++ + Q G I +++ L + W+ LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDIVDKIFLKQLTWNDLFARHSFFT 361
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH-------- 234
+ Y+ YL + + + W G VES++R L ++R + HP+P
Sbjct: 362 QDYKYYLSITASSRTKEAEAVWSGLVESKIRHLVGALDRKPTIAV-AHPFPKGFERVHIV 420
Query: 235 -----------------------EYVDTSKPCAHCA------------------------ 247
E D K AH A
Sbjct: 421 SNEEEAEAVKNGSTKYQDKGTKTETTDERKDAAHQAAALSGVENAEVEPVGEKSANGDSH 480
Query: 248 ------FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQ 300
+++GL+ KP E + DI + FK + + ++PG+ ++ ++H+R
Sbjct: 481 IIYTTTYYIGLELKPLE-PGASRSLDISTDAQIFKSTCTSWAGYQPGINDLSITHVRNFD 539
Query: 301 IPPYVFPEGYKR 312
+P VF G R
Sbjct: 540 LPDDVFQPGETR 551
>gi|367003753|ref|XP_003686610.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
gi|357524911|emb|CCE64176.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
Length = 555
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 153/232 (65%), Gaps = 2/232 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LR +K WA+RR VY NV GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPIIFRIALRAIKLWAQRRAVYGNVFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA +++++RFF++ + W+WP PV+L I++ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MP+ITPAYP M +++N++ ST +V++ +F+ G I ++ NK W+ LF+ + F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKKVILKEFERGMKITNDIFSNKLTWNDLFKKHTF 354
Query: 182 FESYRNYLQVDIVAANAD-DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F Y+ YL + D D L W G VES++R L L +E G HPY
Sbjct: 355 FYDYKFYLTITTATKGTDEDHLKWSGLVESKVRLLILKLEA-LPGITLTHPY 405
>gi|239835851|gb|ACS29263.1| pap1 [Clavispora lusitaniae]
Length = 547
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/246 (45%), Positives = 157/246 (63%), Gaps = 10/246 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +RSLNG RV D+IL LVP F LRC+K WA++R +Y+NV GF GGV
Sbjct: 174 NLLKNLDEKDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPN V +++V +FF++Y+ W WP PV+L I++ L VW+PR
Sbjct: 234 AWAMLVARICQLYPNTVSAVIVEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYPH 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N++ ST V+M +F G + ++ A W LFE + F
Sbjct: 294 DRQHRMPVITPAYPSMCATHNITKSTKDVIMSEFNRGVNVMAQIHAGTASWGLLFERHRF 353
Query: 182 FESYRNYLQVDIVAA---NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY--PHE- 235
F Y+ YL IVAA ++ + L W G +ES++R L +E T G HPY P E
Sbjct: 354 FFQYKFYLC--IVAATKSSSAEHLKWSGMIESKVRLLVQKLEL-TEGITLAHPYVKPFEN 410
Query: 236 -YVDTS 240
YV TS
Sbjct: 411 SYVGTS 416
>gi|146416103|ref|XP_001484021.1| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
6260]
Length = 554
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/238 (43%), Positives = 153/238 (64%), Gaps = 2/238 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +RSLNG RV D+IL LVP F LRC+K WA++R +Y+N+ GF GGV
Sbjct: 174 NLLRNLDEKDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANIFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+L AR+CQLYPNAV +++V +FF +Y+ W WP PV+L I++ L VW+PR
Sbjct: 234 AWAMLTARICQLYPNAVSAVIVEKFFHIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYPH 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N+++ST +++ +F+ G I ++ + K +W LF + F
Sbjct: 294 DRLHRMPVITPAYPSMCATHNITSSTQAIIVSEFKRGAEIMNDISIGKKEWGDLFARHEF 353
Query: 182 FESYRNYL-QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 238
F Y+ YL V +A++ L W G VES+LR L +E T G HPY + D
Sbjct: 354 FFRYKFYLCVVASTKGSAEEHLKWSGMVESKLRILVQKLEL-TEGITIAHPYVKTFED 410
>gi|341899942|gb|EGT55877.1| hypothetical protein CAEBREN_08096 [Caenorhabditis brenneri]
Length = 528
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 133/349 (38%), Positives = 200/349 (57%), Gaps = 23/349 (6%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D+ +VRSLNG RVA+++L+LVPN E FC TLR +K WAK GVYSN GF GG+
Sbjct: 183 NLLKNMDQESVRSLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGI 242
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCA-----IDEAELGFSVWDP 116
WA+LVAR CQLYPNA PS LV + F V++ W +P+P++LC D L W
Sbjct: 243 TWAILVARACQLYPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERPDMLALDNLCWG- 301
Query: 117 RKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF 176
+N D+ H MPIITPA+P NS++NVS ST+ V+ + TIC +V K W LF
Sbjct: 302 -RNHADRFHLMPIITPAFPEQNSTHNVSRSTMEVIKKEMTDALTICNDVFEGKCDWKHLF 360
Query: 177 EPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
E F+ Y++++ + + A + ++ G++ESRLR L ER+ KL H P +
Sbjct: 361 EEVNFYSQYKHFVVMKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKL-AHLNPKKC 419
Query: 237 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG---MEICV 293
TSK + +F+GL+ EVV + D+ + FK ++N+ G +E+ +
Sbjct: 420 QPTSK--SQSLWFIGLEF--DEVV---KNMDLTREINNFKWNLNVQAKQIAGFEDVELDI 472
Query: 294 SHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKD 342
S+++R + Y+ K+ R ++ S +N + G+KRK D
Sbjct: 473 SYVKRSHLIKYLPAAELKKGRF--FVAKASSDDNK---ENAGGMKRKCD 516
>gi|260941482|ref|XP_002614907.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
gi|238851330|gb|EEQ40794.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
Length = 557
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 108/237 (45%), Positives = 151/237 (63%), Gaps = 4/237 (1%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +RSLNG RV D+IL+LVP F LRC+K WA++R VY NV GF GGV
Sbjct: 174 NLLKNIDEKDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNVFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+L AR+CQLYPNAV + +V +FF +YT W WP PV+L I++ L VW+PR
Sbjct: 234 AWAMLTARICQLYPNAVGATIVEKFFTIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPH 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N+++ST +V+M + + G I V + W+ LFE + F
Sbjct: 294 DRQHRMPVITPAYPSMCATHNITSSTQKVIMKELERGAEIMSLVASGEKTWADLFERHSF 353
Query: 182 FESYRNYLQVDIVAANADD--LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
F Y+ YL + + A ADD W G +ES+LR L +E T G HPY ++
Sbjct: 354 FHDYKFYLCI-VAATLADDEEHHKWSGMIESKLRILVQKLEV-TDGIALAHPYVKDF 408
>gi|320583027|gb|EFW97243.1| poly(A) polymerase isozyme [Ogataea parapolymorpha DL-1]
Length = 1547
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 153/234 (65%), Gaps = 6/234 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D+ +R+LNG RV DQIL+LVP F LR +K WA+RR +Y+N+ GF GGV
Sbjct: 1136 NLLRNIDDRDLRALNGTRVTDQILQLVPQKMVFRHALRTIKLWAQRRAIYANMFGFPGGV 1195
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV +++VS+FF++Y W+WP PV+L I++ L +W+P+ +
Sbjct: 1196 AWAMLVARICQLYPNAVGAVIVSKFFQIYLQWKWPQPVLLKPIEDGPLPVRIWNPKLYGQ 1255
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N++ ST ++++ + Q G I +++ K W LF + F
Sbjct: 1256 DRLHRMPVITPAYPSMCATHNITASTQKIILKEMQRGLEIMNDIQFGKRTWKDLFAKHDF 1315
Query: 182 FESYRNYLQVDIVAANADDL---LAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F +Y+ YL V + A D L W G VES+LR L +E G + HPY
Sbjct: 1316 FFAYKFYLTV--ITATRDSYEAHLKWSGMVESKLRLLVQKLEV-VNGIVLAHPY 1366
>gi|366987349|ref|XP_003673441.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
gi|342299304|emb|CCC67054.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
Length = 581
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 156/232 (67%), Gaps = 2/232 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LR +K WA+RR +Y+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAIYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA +++++RFF++ + W+WP PV+L I++ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MP+ITPAYP M +++N++ ST +V++++F G + ++ NK W+ LF+ + F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKKVILEEFARGIQVTNDIFSNKGTWADLFQKHDF 354
Query: 182 FESYRNYLQVDIVAANAD-DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F Y+ YL + + +D + L W G VES+ R L L +E KL HP+
Sbjct: 355 FYKYKFYLTITVSTKGSDEEHLKWSGLVESKTRLLVLKLEALAGIKL-AHPF 405
>gi|388578995|gb|EIM19325.1| Poly(A) polymerase, partial [Wallemia sebi CBS 633.66]
Length = 557
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 107/238 (44%), Positives = 149/238 (62%), Gaps = 8/238 (3%)
Query: 2 SVLNDVDEPTVRSLN-------GCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNV 54
++L ++DE VRSLN G RV D+IL++VPNV+ F +LRC+K WA+RR +YSNV
Sbjct: 168 NLLKNLDERCVRSLNDNLTIIIGSRVTDEILRVVPNVQVFRESLRCIKLWAQRRAIYSNV 227
Query: 55 TGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVW 114
GFLGGV WA+LVAR+CQLYPN ++++FF + W+WP+PV+L I++ L VW
Sbjct: 228 NGFLGGVAWAMLVARICQLYPNENAGAVIAKFFTILYQWKWPHPVLLKEIEDGPLKVRVW 287
Query: 115 DPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSA 174
+P+ D+ H MPIITPAYP M S++NV ST VM +F+ G I + + WS
Sbjct: 288 NPKIYPSDRAHRMPIITPAYPSMCSTHNVGPSTQEVMRQEFKRGMDILDGIHKGTTTWSQ 347
Query: 175 LFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
LF + FF Y++YLQ+ A+ W G VES++RQL +E G HP+
Sbjct: 348 LFNKHEFFSKYKHYLQIIASGQTAESQKKWSGAVESKVRQLVSKLEL-VDGIELAHPF 404
>gi|365991615|ref|XP_003672636.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
gi|343771412|emb|CCD27393.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/239 (42%), Positives = 155/239 (64%), Gaps = 2/239 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F TLR +K WA+RR +Y+NV GF GGV
Sbjct: 175 NLLRNLDEKELRALNGTRVTDEILELVPKPNVFRITLRAIKLWAQRRAIYANVFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA +++++RFF++++ W+WP PV+L I++ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVVLNRFFKIFSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MP+ITPAYP M +++N++ ST +++ +F G + ++ NK W LF+ + F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKTIILKEFARGVQVTNDIFSNKGNWGDLFKKHTF 354
Query: 182 FESYRNYLQVDIVAANAD-DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 239
F Y+ YL + D + L W G VES+LR L L +E G HPY + T
Sbjct: 355 FYEYKFYLTITASTRGTDEEHLKWSGLVESKLRLLILKLEA-LPGINLAHPYTKPFEST 412
>gi|448531596|ref|XP_003870285.1| Pap1 poly(A) polymerase [Candida orthopsilosis Co 90-125]
gi|380354639|emb|CCG24155.1| Pap1 poly(A) polymerase [Candida orthopsilosis]
Length = 557
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 153/232 (65%), Gaps = 2/232 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LR +K WA++R VY+NV GF GGV
Sbjct: 179 NLLKNIDEKDMRALNGTRVTDEILRLVPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGV 238
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV ++++ +FF++Y+ W WP PV+L I++ L VW+PR
Sbjct: 239 AWAMLVARICQLYPNAVSAVILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAM 298
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N++ ST +++M++F G I E+ + WS L E + F
Sbjct: 299 DRQHRMPVITPAYPSMCATHNITNSTQKIIMNEFNRGVEIIGEIFTGQKVWSHLLERHSF 358
Query: 182 FESYRNYL-QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F Y+ YL V +NA++ L + G VES+LR L +E+ G HPY
Sbjct: 359 FHQYKFYLCVVAATKSNAEEHLKYSGMVESKLRLLVQKLEQ-VDGVELAHPY 409
>gi|339236667|ref|XP_003379888.1| poly(A) polymerase gamma [Trichinella spiralis]
gi|316977404|gb|EFV60513.1| poly(A) polymerase gamma [Trichinella spiralis]
Length = 923
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 125/315 (39%), Positives = 180/315 (57%), Gaps = 30/315 (9%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRR-GVYSNVTGFLGGV 61
+L ++D +RSLNGCRV D+IL LVPN E F TLR +KFWAKR+ GVYSNV GFLGGV
Sbjct: 378 LLRNLDVKCIRSLNGCRVTDEILNLVPNKETFRLTLRAIKFWAKRKKGVYSNVVGFLGGV 437
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVML----CAIDEAELGFS--VWD 115
+WA+LVAR CQLYP A P++LV++ WP PV+L + + +GF +WD
Sbjct: 438 SWAMLVARTCQLYPRAAPNVLVNK--------EWPKPVLLKNSITSQNHGYIGFQELIWD 489
Query: 116 PRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSAL 175
PR + D+ H MPIITPA+P NS++NVS++T ++ G + EV W L
Sbjct: 490 PRVKQSDRYHLMPIITPAFPQQNSTFNVSSTTRSILQKFLHEGFLVSTEVICKGLSWPKL 549
Query: 176 FEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHE 235
FEP FF Y++Y+ + AA DL+ W G VES++R L E +T G L H P +
Sbjct: 550 FEPSNFFVKYKHYIVISCFAATRADLITWSGLVESKMRYLIGQFEHNT-GVLLAHVNPEQ 608
Query: 236 Y--VDTSKPCAHCAFFMGLQRKPGEVVQEG---QQFDIRGSVEEFKLSINMYMF----WK 286
+ ++ + +GL E+ +EG + D+ ++ F SI W+
Sbjct: 609 FSPLEEHGDGVESFWVVGL-----EMNKEGIGAKNIDLTSDIQSFVDSIMRQALNSDVWR 663
Query: 287 PGMEICVSHIRRKQI 301
GM++ + RR+++
Sbjct: 664 QGMKVEAKYRRRREL 678
>gi|298708409|emb|CBJ48472.1| conserved unknown protein (Partial) [Ectocarpus siliculosus]
Length = 496
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/264 (45%), Positives = 164/264 (62%), Gaps = 17/264 (6%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +D+ VRSLNG RVA+ IL LVPN + F TTLR +K WA+RRG+YSNV G LGGVNW
Sbjct: 177 LRHLDDAGVRSLNGVRVAELILSLVPNHQAFRTTLRAVKEWARRRGIYSNVLGCLGGVNW 236
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELG----------FSV 113
A+LVA V Q YPNA PS+L+++FF +Y W+WPN V L + + +V
Sbjct: 237 AILVAFVVQRYPNASPSVLLTKFFLMYHRWKWPNHVSLNELQSLQETNVTEGHPFPLHAV 296
Query: 114 WDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWS 173
W+P N RDK H MPIITPAYP MNSSYNV +R++ ++ G I + + L A W+
Sbjct: 297 WNPVANPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIREEIARGWRITKGISLGIANWA 356
Query: 174 ALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY- 232
LFE FF + Y+QVDI A +A D W GW+ESR+R + ++ D ++ +P+
Sbjct: 357 NLFERSDFFWRFELYVQVDISARSAADHRLWFGWIESRMR--SFLVCLDQIDMVEAYPFV 414
Query: 233 ---PHEYVDTSKPCA-HCAFFMGL 252
P+ Y+ ++ A +FF+GL
Sbjct: 415 NPLPNPYLTNAETGAVGNSFFIGL 438
>gi|328772740|gb|EGF82778.1| hypothetical protein BATDEDRAFT_9489 [Batrachochytrium
dendrobatidis JAM81]
Length = 556
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 111/229 (48%), Positives = 150/229 (65%), Gaps = 3/229 (1%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D+ +RSLNG RV D IL+LVPNVE F LRC+K WA +R +YSNV GF GGV WA
Sbjct: 196 KNLDDRCIRSLNGSRVTDDILRLVPNVETFRIALRCIKLWALQRAIYSNVMGFFGGVAWA 255
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
+L+ARVCQLYP A +VS+FF++ W WP PV+L I+E L VW+P+ +DK
Sbjct: 256 ILIARVCQLYPCAAAGEVVSKFFQIMYRWEWPLPVLLKPIEEGPLAVRVWNPKIYPQDKA 315
Query: 125 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 184
H MPIITPAYP M S++NV+ ST V +F+ +++ L + +W+ LF+ FF
Sbjct: 316 HRMPIITPAYPSMCSTHNVTVSTQTVTTQEFERAAVTTDKIMLGREKWTVLFQKNDFFHR 375
Query: 185 YRNYLQVDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
Y+ YLQV I ++N D+ L W G+VESRLRQL + +E + HPY
Sbjct: 376 YKYYLQV-IASSNDDEKQLMWAGFVESRLRQLVMKLELAENLDI-AHPY 422
>gi|156843263|ref|XP_001644700.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
70294]
gi|156115348|gb|EDO16842.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
70294]
Length = 572
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 151/232 (65%), Gaps = 2/232 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LR +K WA+RR VY NV GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPIVFRIALRAIKLWAQRRAVYGNVFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA +++++RFF++ + W+WP PV+L I++ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N++ ST +V++ +F+ G I + NKA W LF+ + F
Sbjct: 295 DRCHRMPVITPAYPSMCATHNITESTKKVILKEFERGVEITNNIFSNKATWEDLFKRHTF 354
Query: 182 FESYRNYLQVDI-VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F Y+ YL V N + L W G VES++R L L +E G HPY
Sbjct: 355 FHDYKFYLTVTASTKGNDEQHLKWSGLVESKVRLLILKLEA-LPGIKSAHPY 405
>gi|444321773|ref|XP_004181542.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
gi|387514587|emb|CCH62023.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
Length = 574
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 157/234 (67%), Gaps = 6/234 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R++NG RV D+IL+LVP F LR +K WA RR +Y+NV GF GGV
Sbjct: 175 NLLRNLDEKDLRAINGTRVTDEILELVPKPNVFRIALRAVKIWAPRRAIYANVFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA +++++RFF++ W+WP PV+L I++ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFKILLEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MP+ITPAYP M +++N++ ST +V++ +F+ G + ++ NK W+ LF+ + F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITDSTKKVILQEFERGVQVTNDIFTNKKTWADLFKKHEF 354
Query: 182 FESYRNYLQVDIVAA---NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F Y+ YL V VA+ + + L W G+VES+LR L L +E KL HPY
Sbjct: 355 FHKYKFYLTV--VASTRGSTEQHLKWSGFVESKLRLLVLKLETLAGIKL-AHPY 405
>gi|324975506|gb|ADY62687.1| PAPa [Candida orthopsilosis]
Length = 552
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 153/232 (65%), Gaps = 2/232 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LR +K WA++R VY+NV GF GGV
Sbjct: 174 NLLKNIDEKDMRALNGTRVTDEILRLVPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV ++++ +FF++Y+ W WP PV+L I++ L VW+PR
Sbjct: 234 AWAMLVARICQLYPNAVSAVILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAM 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N++ ST +++M++F G I E+ + WS L E + F
Sbjct: 294 DRQHRMPVITPAYPSMCATHNITNSTQKIIMNEFNRGVEIIGEIFTGQKVWSHLLERHSF 353
Query: 182 FESYRNYL-QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F Y+ YL V +NA++ L + G VES+LR L +E+ G HPY
Sbjct: 354 FHQYKFYLCVVAATKSNAEEHLKYSGMVESKLRLLVQKLEQ-VDGVELAHPY 404
>gi|255723652|ref|XP_002546758.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
gi|240130534|gb|EER30100.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
Length = 557
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/240 (44%), Positives = 155/240 (64%), Gaps = 6/240 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL LVP F LRC+K WA++R +Y+NV GF GGV
Sbjct: 174 NLLKNIDEKDLRALNGTRVTDEILTLVPKQTVFKHALRCIKMWAQQRAIYANVFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV ++++ +FF +Y+ W WP PV+L I++ L VW+P+
Sbjct: 234 AWAMLVARICQLYPNAVSAVIIEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPKLYAP 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N+++ST +V++ +FQ G I + WS LFE + F
Sbjct: 294 DRQHRMPVITPAYPSMCATHNITSSTQKVILSEFQRGIEIMNGINSGSKTWSDLFERHDF 353
Query: 182 FESYRNYLQVDIVAA---NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 238
F Y+ YL IVAA N+++ L + G VES+LR L +E G HPY + D
Sbjct: 354 FFRYKFYLC--IVAATKSNSEEHLKYGGMVESKLRLLVQKLEL-VEGIELAHPYVKTFED 410
>gi|212531585|ref|XP_002145949.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
gi|210071313|gb|EEA25402.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
Length = 599
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 147/234 (62%), Gaps = 2/234 (0%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +D+ VRSLNG RV DQIL+LVP + F LR +K WA+RR +YSN+ GF GGV W
Sbjct: 182 LRGLDDKEVRSLNGTRVTDQILELVPQQKTFRIALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+LVARVCQLYP A S++V +FFR+ T W WP PV+L I++ L VW+P+ D+
Sbjct: 242 AMLVARVCQLYPQATGSVIVGKFFRIMTKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDR 301
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++N+S ST V++ + Q G + +++ + W+ LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATHNISLSTKAVILRELQRGGDMVDKIFAKQLTWNDLFTRHTFFS 361
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
+ Y+ YLQ+ + + W G VES+LR L ++R + HP+P +
Sbjct: 362 KDYKYYLQITASSKTKEAESVWSGLVESKLRHLVGALDRKNIIAI-AHPFPKGF 414
>gi|392870480|gb|EAS32287.2| Poly(A) polymerase PAPalpha [Coccidioides immitis RS]
Length = 599
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/377 (32%), Positives = 188/377 (49%), Gaps = 64/377 (16%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +R +NG RV D+IL+LVP + F LR +K WA+ R +YSNV GF GGV
Sbjct: 181 LLRGLDEREIRCVNGTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S++V +FFR+ W WP PV+L I++ L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGD 300
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP M +++NVS ST V++ + + G I E++ L + +WS LF + FF
Sbjct: 301 RFHLMPIITPAYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFF 360
Query: 183 -ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY----- 236
+ Y+ YL + + + + W G VE++LR L + +++ + HP+P +
Sbjct: 361 SKDYKYYLNITASSTSKEAQSVWSGLVEAKLRHLVIALDKKASIDV-AHPFPKGFERVHS 419
Query: 237 --------------------------VDTSKPCAHCA----------------------- 247
D + AH A
Sbjct: 420 CKDEKEIEVAKSGLTRFQVKGTKTATTDETNDPAHVAALESANGSINMPGLGQTEDSNNH 479
Query: 248 ------FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQ 300
+++GL+ KP V + DI FK + ++PG+ ++ ++H+R
Sbjct: 480 TLHTTTYYIGLELKP-LVPGASRSLDISSETHMFKNMCTSWAQYQPGINDVTITHVRNYD 538
Query: 301 IPPYVFPEGYKRTRHPR 317
+P VF G R P+
Sbjct: 539 LPEDVFHPGETRPVRPK 555
>gi|303317852|ref|XP_003068928.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108609|gb|EER26783.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 599
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/377 (32%), Positives = 189/377 (50%), Gaps = 64/377 (16%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +R +NG RV D+IL+LVP + F LR +K WA+ R +YSNV GF GGV
Sbjct: 181 LLRGLDEREIRCVNGTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S++V +FFR+ W WP PV+L I++ L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGD 300
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP M +++NVS ST V++ + + G I E++ L + +WS LF + FF
Sbjct: 301 RFHLMPIITPAYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFF 360
Query: 183 -ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY----- 236
+ Y+ YL + + + + W G VE++LR L + +++ ++ HP+P +
Sbjct: 361 SKDYKYYLNITASSTSKEAQSVWSGLVEAKLRHLVIALDKKASIEV-AHPFPKGFERVHR 419
Query: 237 --------------------------VDTSKPCAHCA----------------------- 247
D + AH A
Sbjct: 420 CKDEKEIEVAKSGLTRFQVKGTKTATTDETNDPAHVAALESANGSINMPGLGQTEESNNH 479
Query: 248 ------FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQ 300
+++GL+ KP V + DI FK + ++PG+ ++ ++H+R
Sbjct: 480 TLHTTTYYIGLELKP-LVPGASRSLDISSETHMFKNMCTSWAQYQPGINDLTITHVRNYD 538
Query: 301 IPPYVFPEGYKRTRHPR 317
+P VF G R P+
Sbjct: 539 LPEDVFHPGETRPVRPK 555
>gi|254578066|ref|XP_002495019.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
gi|238937909|emb|CAR26086.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
Length = 567
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 153/232 (65%), Gaps = 2/232 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LR +K WA RR +Y+NV GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPIVFRIALRAIKLWANRRAIYANVFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA +++++RFF++ + W+WP PV+L I++ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNATSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MP+ITPAYP M +++N++ ST RV++ + + G +I ++ NK WS LF + F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKRVILQELENGISITNDIFSNKKTWSDLFTKHNF 354
Query: 182 FESYRNYLQVDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F Y+ YL V D+ L W G VES++R L L +E KL HP+
Sbjct: 355 FYKYKFYLTVMASTRGTDEENLKWSGMVESKVRLLVLKLEALPGIKL-AHPF 405
>gi|258563094|ref|XP_002582292.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
gi|237907799|gb|EEP82200.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
Length = 616
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 122/369 (33%), Positives = 187/369 (50%), Gaps = 64/369 (17%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +R +NG RV D+IL+LVP + F LR +K WA+ R +YSNV GF GGV
Sbjct: 198 LLRGLDERELRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQSRAIYSNVVGFPGGVA 257
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S+++ +FFR+ W WP PV+L I++ L VW+P+ D
Sbjct: 258 WAMLVARVCQLYPQATGSVIIGKFFRIMNQWNWPQPVLLKPIEDGPLHMKVWNPKIYHGD 317
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP M +++N+S ST V++ + + G I +++ + + +WS LF + FF
Sbjct: 318 RFHLMPIITPAYPSMCATHNISLSTKAVILRELKRGGDIVDKIFMGQLRWSDLFAKHSFF 377
Query: 183 -ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH------- 234
+ Y+ YL + + + W G VES+LR L L ++R + ++ HP+P
Sbjct: 378 SKDYKYYLSITASSTTKEAQSVWSGLVESKLRHLVLALDRKSSIEV-AHPFPKGFERVHI 436
Query: 235 ------------------------EYVDTSKPCAHCA----------------------- 247
E D AH A
Sbjct: 437 CKDEKETEMAKNGSTKFQAKGTKTETTDEVNDPAHLATTENENGLIPMPKLEQTEQPDSH 496
Query: 248 ------FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQ 300
+++GL+ KP V + DI + FK ++ ++PG+ E+ ++H+R
Sbjct: 497 TIHTTTYYVGLELKP-LVPGASKSLDISSETQLFKNMCTSWVQYQPGINELTITHVRNYD 555
Query: 301 IPPYVFPEG 309
+P VF G
Sbjct: 556 LPEDVFQSG 564
>gi|325090895|gb|EGC44205.1| poly(A) polymerase Pap [Ajellomyces capsulatus H88]
Length = 594
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 149/235 (63%), Gaps = 2/235 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +R +NG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV
Sbjct: 181 LLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S +V +FFR+ W+WP PV+L I+E L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGD 300
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
K H MPIITPAYP M +++NVS ST V++ + + G I +++ + + W+ LF + FF
Sbjct: 301 KYHLMPIITPAYPSMCATHNVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFF 360
Query: 183 -ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
+ Y+ YL + + + D W G VES+LR L ++R + ++ HP+P +
Sbjct: 361 SQDYKYYLNITSASRSKDAQSVWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 414
>gi|225561454|gb|EEH09734.1| poly(A) polymerase Pap [Ajellomyces capsulatus G186AR]
Length = 600
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 149/235 (63%), Gaps = 2/235 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +R +NG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV
Sbjct: 181 LLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S +V +FFR+ W+WP PV+L I+E L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSAVVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGD 300
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
K H MPIITPAYP M +++NVS ST V++ + + G I +++ + + W+ LF + FF
Sbjct: 301 KYHLMPIITPAYPSMCATHNVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFF 360
Query: 183 -ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
+ Y+ YL + + + D W G VES+LR L ++R + ++ HP+P +
Sbjct: 361 SQDYKYYLNITSASRSKDAQSVWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 414
>gi|154282671|ref|XP_001542131.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
gi|150410311|gb|EDN05699.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
Length = 594
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 149/235 (63%), Gaps = 2/235 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +R +NG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV
Sbjct: 181 LLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S +V +FFR+ W+WP PV+L I+E L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGD 300
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
K H MPIITPAYP M +++NVS ST V++ + + G I +++ + + W+ LF + FF
Sbjct: 301 KYHLMPIITPAYPSMCATHNVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFF 360
Query: 183 -ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
+ Y+ YL + + + D W G VES+LR L ++R + ++ HP+P +
Sbjct: 361 SQDYKYYLNITSASRSKDAQSVWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 414
>gi|261191352|ref|XP_002622084.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
gi|239589850|gb|EEQ72493.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
gi|239612743|gb|EEQ89730.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis ER-3]
Length = 599
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 107/252 (42%), Positives = 153/252 (60%), Gaps = 4/252 (1%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +R +NG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV
Sbjct: 181 LLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S +V +FFR+ W+WP PV+L I+E L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGD 300
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
K H MPIITPAYP M +++NVS ST V++ + + G I + + + + W+ LF + FF
Sbjct: 301 KYHLMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIADRIFVGQLTWNDLFTRHTFF 360
Query: 183 -ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH--EYVDT 239
+ Y+ YL + + + D W G VES+LR L ++R + ++ HP+P E +
Sbjct: 361 SQDYKYYLSITSASRSKDAQSVWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGFERIHI 419
Query: 240 SKPCAHCAFFMG 251
K A MG
Sbjct: 420 CKDQKEIAEVMG 431
>gi|327357099|gb|EGE85956.1| Poly(A) polymerase PAPa [Ajellomyces dermatitidis ATCC 18188]
Length = 599
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 107/252 (42%), Positives = 153/252 (60%), Gaps = 4/252 (1%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +R +NG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV
Sbjct: 181 LLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S +V +FFR+ W+WP PV+L I+E L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGD 300
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
K H MPIITPAYP M +++NVS ST V++ + + G I + + + + W+ LF + FF
Sbjct: 301 KYHLMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIADRIFVGQLTWNDLFTRHTFF 360
Query: 183 -ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH--EYVDT 239
+ Y+ YL + + + D W G VES+LR L ++R + ++ HP+P E +
Sbjct: 361 SQDYKYYLSITSASRSKDAQSVWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGFERIHI 419
Query: 240 SKPCAHCAFFMG 251
K A MG
Sbjct: 420 CKDQKEIAEVMG 431
>gi|392579948|gb|EIW73075.1| hypothetical protein TREMEDRAFT_67196 [Tremella mesenterica DSM
1558]
Length = 648
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 149/232 (64%), Gaps = 4/232 (1%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L VD+ + R LNG RV D IL LVP+V F T LR ++ WAKRRG+YSNV GF GGV
Sbjct: 175 ILRGVDDASQRGLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVA 234
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA--ELGFSVWDPRKNR 120
WALL AR+CQLYP A P+ +V++FF ++ W WPNPV+L I+ + SVW+P+ +R
Sbjct: 235 WALLTARICQLYPTAAPATIVAKFFPIFYQWGWPNPVLLKKIESGPPNMHHSVWNPKLDR 294
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNK-AQWSALFEPY 179
RD H MPIITPAYP M +++N++ ST+ V+ ++ + + + N + W LFE
Sbjct: 295 RDMAHRMPIITPAYPSMCTTHNITASTMSVIKNEMLRAMQVTDRIMSNPGSSWMELFEQI 354
Query: 180 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP 231
FF Y++Y+QV A+ ++ + W G VESR+R L +E ++ + HP
Sbjct: 355 DFFSMYKSYVQVIASASTSEGIKDWGGTVESRIRTLVQDLE-NSDNIITAHP 405
>gi|240274559|gb|EER38075.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus H143]
Length = 493
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 149/235 (63%), Gaps = 2/235 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +R +NG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV
Sbjct: 74 LLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 133
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S +V +FFR+ W+WP PV+L I+E L VW+P+ D
Sbjct: 134 WAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGD 193
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
K H MPIITPAYP M +++NVS ST V++ + + G I +++ + + W+ LF + FF
Sbjct: 194 KYHLMPIITPAYPSMCATHNVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFF 253
Query: 183 -ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
+ Y+ YL + + + D W G VES+LR L ++R + ++ HP+P +
Sbjct: 254 SQDYKYYLNITSASRSKDAQSVWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 307
>gi|350638725|gb|EHA27081.1| hypothetical protein ASPNIDRAFT_46294 [Aspergillus niger ATCC 1015]
Length = 579
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 146/234 (62%), Gaps = 2/234 (0%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE VRSLNG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV W
Sbjct: 182 LRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+LVARVCQLYP A S++V +FFR+ W WP PV+L I++ L VW+P+ D+
Sbjct: 242 AMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDR 301
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++NVS ST V++ + Q G I +++ L + +W LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATHNVSMSTKAVILRELQRGGDIVDKIFLKQLRWEDLFARHTFFT 361
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
+ Y+ YL + + + W G VES++R L ++R + HP+P +
Sbjct: 362 KDYKYYLSITASSRTKEAESVWSGLVESKIRHLVGALDRKATIAI-AHPFPKGF 414
>gi|68482965|ref|XP_714613.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
gi|62900711|sp|Q9UW26.1|PAPA_CANAL RecName: Full=Poly(A) polymerase PAPa; AltName: Full=Polynucleotide
adenylyltransferase a
gi|5771506|gb|AAD51407.1| PAPa [Candida albicans]
gi|46436196|gb|EAK95563.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
Length = 555
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 152/234 (64%), Gaps = 6/234 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LRC+K WA++R VY N+ GF GGV
Sbjct: 174 NLLKNIDEKDLRALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV +++V +FF +Y+ W WP PV+L I++ L VW+PR
Sbjct: 234 AWAMLVARICQLYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYAL 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N+++ST +V++ +FQ G + ++ + K WS L E + F
Sbjct: 294 DRQHRMPVITPAYPSMCATHNITSSTQKVILSEFQRGIELMNDINVGKKSWSDLLERHDF 353
Query: 182 FESYRNYLQVDIVAANAD---DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F Y+ YL IVAA + L + G VES+LR L +E G HPY
Sbjct: 354 FFRYKFYLC--IVAATRSTYAEHLKYSGMVESKLRLLVQKLEL-VEGIELAHPY 404
>gi|403337557|gb|EJY68000.1| Poly(A) polymerase [Oxytricha trifallax]
Length = 575
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 209/376 (55%), Gaps = 51/376 (13%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L + D+ ++RSLNGCRV D IL+LVPN E F TTLR +K WAK RG+YSNV GFLGGV
Sbjct: 203 NILRNCDKESIRSLNGCRVTDSILQLVPNQESFRTTLRVIKLWAKVRGIYSNVMGFLGGV 262
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRW--PNPVMLCAI--DEAELGFSVWDPR 117
WA+LVA +C PN P+ L++ FF+ YT W W NP++L I D + F++
Sbjct: 263 AWAILVANICITCPNLEPNKLLNYFFKAYTQWEWNYQNPILLTEIKNDRNSVNFTIEADL 322
Query: 118 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV------------ 165
+T MPIITPA+P MN+++NVS ST R M+ +F+ G I E +
Sbjct: 323 FYEEKQTDLMPIITPAFPSMNATFNVSHSTKRAMLIEFEKGLKITEALLARNEDGSKLHQ 382
Query: 166 ELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTY- 224
E+N W LF+ + FF+SY +++Q+ I++ +A+D W G++ES++R+L +E+
Sbjct: 383 EMN---WRRLFKKFNFFKSYVHFIQIQILSKSAEDHKKWTGFIESKIRKLLQQLEKLNEL 439
Query: 225 --GKLQCHPYPHEY---VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFK--- 276
G ++ P+P Y + P +F G++ K E + + D+ +++ F
Sbjct: 440 KGGCMEFRPWPKSYHLENNLDFPMDDTYYF-GIRIKKNESDAQ-MRIDLTDTIKIFYKKL 497
Query: 277 ---LSIN---MYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNE 330
+S++ M M ++I +++IRR+ +P + P G ++N NE
Sbjct: 498 REWISVDHKLMQMIVDKLVDIKINYIRRETLPDVIRPRG---------------AQNLNE 542
Query: 331 YQTGSGLKRKKDPESV 346
+ G +++ D + +
Sbjct: 543 QDSALGKRQRVDSQRI 558
>gi|4062995|dbj|BAA36217.1| poly(A) polymerase isozyme [Candida albicans]
Length = 555
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 152/234 (64%), Gaps = 6/234 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LRC+K WA++R VY N+ GF GGV
Sbjct: 174 NLLKNIDEKDLRALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV +++V +FF +Y+ W WP PV+L I++ L VW+PR
Sbjct: 234 AWAMLVARICQLYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYAL 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N+++ST +V++ +FQ G + ++ + K WS L E + F
Sbjct: 294 DRQHRMPVITPAYPSMCATHNITSSTQKVILSEFQRGIELMNDINVGKKSWSDLLERHDF 353
Query: 182 FESYRNYLQVDIVAANAD---DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F Y+ YL IVAA + L + G VES+LR L +E G HPY
Sbjct: 354 FFRYKFYLC--IVAATRSTYAEHLKYSGMVESKLRLLVQKLEL-VEGIELAHPY 404
>gi|238484201|ref|XP_002373339.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
gi|83765996|dbj|BAE56139.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701389|gb|EED57727.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
Length = 609
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 146/234 (62%), Gaps = 2/234 (0%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE VRSLNG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV W
Sbjct: 182 LRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+LVARVCQLYP A S++V +FFR+ W WP PV+L I++ L VW+P+ D+
Sbjct: 242 AMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDR 301
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++NVS ST V++ + Q G I +++ L + W+ LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATHNVSMSTKTVILRELQRGGDIVDKIFLKQNTWNDLFARHSFFT 361
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
Y+ YL + + + W G VES++R L ++R + + HP+P +
Sbjct: 362 RDYKYYLSITASSRTKEAEAVWSGLVESKIRHLVGALDRKSTIAV-AHPFPKGF 414
>gi|425765475|gb|EKV04155.1| Poly(A) polymerase Pap [Penicillium digitatum Pd1]
gi|425778347|gb|EKV16478.1| Poly(A) polymerase Pap [Penicillium digitatum PHI26]
Length = 597
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 144/234 (61%), Gaps = 2/234 (0%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE VRSLNG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV W
Sbjct: 182 LRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+LVARVCQLYP A S++V +FFR+ W WP PV+L I++ L VW+P+ D+
Sbjct: 242 AMLVARVCQLYPQATGSVIVGKFFRIMNKWNWPQPVLLKQIEDGPLQIKVWNPKIYHGDR 301
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++N+S ST V++ + Q G I +++ + + W LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDIVDKIFMKQLSWQDLFARHTFFT 361
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
Y+ YL + + + W G VES+LR L ++R + HP+P +
Sbjct: 362 HDYKYYLSITASSKTKEAESVWSGLVESKLRHLVGALDRKPIVAV-AHPFPKGF 414
>gi|317140350|ref|XP_001818141.2| poly(A) polymerase pla1 [Aspergillus oryzae RIB40]
gi|391870730|gb|EIT79906.1| poly(A) polymerase [Aspergillus oryzae 3.042]
Length = 599
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 146/234 (62%), Gaps = 2/234 (0%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE VRSLNG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV W
Sbjct: 182 LRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+LVARVCQLYP A S++V +FFR+ W WP PV+L I++ L VW+P+ D+
Sbjct: 242 AMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDR 301
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++NVS ST V++ + Q G I +++ L + W+ LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATHNVSMSTKTVILRELQRGGDIVDKIFLKQNTWNDLFARHSFFT 361
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
Y+ YL + + + W G VES++R L ++R + + HP+P +
Sbjct: 362 RDYKYYLSITASSRTKEAEAVWSGLVESKIRHLVGALDRKSTIAV-AHPFPKGF 414
>gi|294939386|ref|XP_002782444.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239894050|gb|EER14239.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 553
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 120/315 (38%), Positives = 184/315 (58%), Gaps = 14/315 (4%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D+ +VR +NG RVAD ILKLVP F LR +K WAKRRG+Y+N+ GF GG+
Sbjct: 187 LLKNLDDRSVRCVNGTRVADLILKLVPTPNTFRGCLRLIKLWAKRRGLYANIIGFFGGIT 246
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-AELG---FSVWDPRK 118
WA+LVARVCQ++PN LV RFF + + W W NPV LC I + +E+G F VW+P++
Sbjct: 247 WAILVARVCQMFPNMQSVQLVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPKQ 306
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP 178
D++H MP+ITPA+P MNS+YNV+ +T R++M + + + + + + W L
Sbjct: 307 YASDRSHLMPVITPAFPSMNSTYNVTETTKRIIMGEIERAHKLTLPKK-EQVDWELLCHK 365
Query: 179 YLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY-- 236
+ FF +Y Y+Q+ + A ++ +KG+VESRLR L M+E +T G P+P E
Sbjct: 366 FPFFCNYLYYVQIRVSALSSTAYRKYKGFVESRLRLLVRMLE-NTPGIKSVRPWPEEMPY 424
Query: 237 -VDTSKPCAHCAFFMGLQRKPGEVVQEGQQF--DIRGSVEEFKLSINMYM---FWKPGME 290
VD C +++GL + GQ D+R F IN + + E
Sbjct: 425 VVDGEVRENSCCWYIGLDFPKLSSMAAGQTVTCDLRNCTSGFFDRINEWSEKDTYHGQFE 484
Query: 291 ICVSHIRRKQIPPYV 305
+ +++I R ++P ++
Sbjct: 485 MDIAYISRPKLPEHL 499
>gi|70996294|ref|XP_752902.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
gi|66850537|gb|EAL90864.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
gi|159131656|gb|EDP56769.1| poly(A) polymerase Pap [Aspergillus fumigatus A1163]
Length = 580
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 147/234 (62%), Gaps = 2/234 (0%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE VRSLNG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV W
Sbjct: 182 LRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+LVARVCQLYP+A S++V +FFR+ W WP PV+L I++ L VW+P+ D+
Sbjct: 242 AMLVARVCQLYPHATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDR 301
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++N+S ST V++ + Q G I +++ L + W+ LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDIVDKIFLKQLTWNDLFARHSFFT 361
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
+ Y+ YL + + + W G VES++R L ++R + HP+P +
Sbjct: 362 QDYKYYLSITASSRTKEAEAVWSGLVESKIRHLVGALDRKPTIAV-AHPFPKGF 414
>gi|159489342|ref|XP_001702656.1| poly(a) polymerase [Chlamydomonas reinhardtii]
gi|158280678|gb|EDP06435.1| poly(a) polymerase [Chlamydomonas reinhardtii]
Length = 407
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/223 (48%), Positives = 139/223 (62%), Gaps = 4/223 (1%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
+VL DEPTVR+LNGCRV D +LKLVP E F T LR +K WA RG+ SNVTG+LGGV
Sbjct: 179 AVLRGCDEPTVRALNGCRVTDTMLKLVPRQEVFRTALRAVKHWASLRGISSNVTGYLGGV 238
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
N A++VA++CQLYP A S ++ +FF + W WP + L +E LG VWDPR R
Sbjct: 239 NLAIMVAKICQLYPRAEASTVLLKFFILLKAWPWPRAIHLRIPEEHSLGLPVWDPRPGTR 298
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV----ELNKAQWSALFE 177
D MP+ITPAYP MNS YNV STL VM ++F +C +WS LF
Sbjct: 299 DSLALMPVITPAYPAMNSLYNVQRSTLEVMTEEFAAAADVCTSFLHCPPGKPIEWSRLFT 358
Query: 178 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE 220
P FF + Y+Q+++ A + DL+ W GWV SR+R+L +E
Sbjct: 359 PVPFFTQHSFYIQLEVSADSEGDLVLWDGWVSSRIRRLVRNLE 401
>gi|225677646|gb|EEH15930.1| Poly(A) polymerase PAPa [Paracoccidioides brasiliensis Pb03]
gi|226295198|gb|EEH50618.1| Poly(A) polymerase pla1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/235 (42%), Positives = 148/235 (62%), Gaps = 2/235 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +R +NG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV
Sbjct: 181 LLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S++V +FFR+ W WP PV+L I+E L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSVIVGKFFRIMNQWNWPQPVLLKPIEEGPLQMKVWNPKIYHGD 300
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP M +++NVS ST V++ + + G I +++ L + W+ LF + FF
Sbjct: 301 RYHLMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIVDKIFLGQLTWNDLFTRHTFF 360
Query: 183 -ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
+ Y+ YL + + + W G VES+LR L ++R + ++ HP+P +
Sbjct: 361 SQDYKYYLSITSSSRGKEAQSVWSGLVESKLRHLVGALDRKSSIEV-AHPFPKGF 414
>gi|358401751|gb|EHK51049.1| hypothetical protein TRIATDRAFT_288652 [Trichoderma atroviride IMI
206040]
Length = 572
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/405 (32%), Positives = 194/405 (47%), Gaps = 65/405 (16%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L +DE +RSLNG RV D+IL LVP F LR +K WA+RR VY+N+ GF GGV
Sbjct: 180 SLLRGLDEAELRSLNGTRVTDEILALVPEEATFKLALRAIKLWAQRRAVYANIMGFPGGV 239
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVARVCQLYP A S++V++FF V WRWP PV+L I L VW+P+ +
Sbjct: 240 AWAMLVARVCQLYPKAETSVIVNKFFLVIGQWRWPQPVLLKPIGSGPLPVRVWNPKVYKG 299
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D H MP+ITPAYP M +++N++ S++ ++ + + G I EE+ + K WS LF + F
Sbjct: 300 DSFHLMPVITPAYPSMCATFNITRSSMTIIQRELRRGLEISEEIMVGKRPWSDLFVKHTF 359
Query: 182 F-ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY---- 236
F + YR Y+ V + N + W G+VES++R L +E+ + L HP+ Y
Sbjct: 360 FTQGYRYYISVVSASKNKEAHKVWSGYVESKVRMLVQKLEQHSSIAL-AHPFNKGYDRRH 418
Query: 237 ---------------------------------------VDTSKPCAHCAFFMGLQRKPG 257
D+S P + +
Sbjct: 419 LCKNDHEIEQVQEGSLEFVIKDEGKGQTSEEKNPKLEENQDSSAPTSPVEVYTTTHYIGI 478
Query: 258 EVVQEGQQFDIRGSVEEFKLSINMYMFW----KPGMEICVSHIRRKQIPPYVFPEGYKRT 313
E+ + + D+ V+EFK+ + + +P + + V H+R +P VF G
Sbjct: 479 ELEEGAKSLDLSYQVDEFKVLCTSWKKYEDELRPLVSLGVQHVRNFNLPDDVFEAG---- 534
Query: 314 RHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSIS 358
E + ++ L KK + D P KRQ S
Sbjct: 535 ------------ETKPQKKSAKSLASKKRGPTEDNTPPAKRQQAS 567
>gi|50292873|ref|XP_448869.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528182|emb|CAG61839.1| unnamed protein product [Candida glabrata]
Length = 569
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 152/233 (65%), Gaps = 4/233 (1%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LR +K WA+RR +Y+NV GF GGV
Sbjct: 175 ALLRNLDEKDLRALNGTRVTDEILELVPKPSVFRIALRAIKIWAQRRAIYANVFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA +++++RFF++ + W+WP PV+L I++ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFKILSEWKWPQPVILKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MP+ITPAYP M +++N++ ST V++ + G + ++ K W+ LF + F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKAVILKELNRGIQVTNDIFAYKKTWADLFTKHDF 354
Query: 182 FESYRNYLQVDIVAANADD--LLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F Y+ YL + A DD L W G VES+LR LTL +E KL HP+
Sbjct: 355 FFQYKYYLTI-TAATRGDDEEHLKWSGLVESKLRLLTLKLETIPGIKL-AHPF 405
>gi|207343429|gb|EDZ70889.1| YKR002Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271932|gb|EEU06953.1| Pap1p [Saccharomyces cerevisiae JAY291]
Length = 568
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/236 (42%), Positives = 155/236 (65%), Gaps = 2/236 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LR +K WA+RR VY+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA +++++RFF + + W WP PV+L I++ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MP+ITPAYP M +++N++ ST +V++ +F G I ++ NK W+ LFE F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDF 354
Query: 182 FESYRNYLQVDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
F Y+ YL++ +D+ L W G VES++R L + +E T K+ HP+ +
Sbjct: 355 FFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLTGIKI-AHPFTKPF 409
>gi|401840600|gb|EJT43353.1| PAP1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 569
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 155/236 (65%), Gaps = 2/236 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LR +K WA+RR VY+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA +++++RFF + + W WP PV+L I++ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MP+ITPAYP M +++N++ ST +V++ +F+ G I ++ NK W+ LFE F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKKVILKEFERGVQITNDIFSNKKSWANLFEKNDF 354
Query: 182 FESYRNYLQVDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
F Y+ YL++ +D+ L W G VES++R L + +E K+ HP+ +
Sbjct: 355 FFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF 409
>gi|326471772|gb|EGD95781.1| Poly(A) polymerase PAPalpha [Trichophyton tonsurans CBS 112818]
Length = 601
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 151/235 (64%), Gaps = 2/235 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +R +NG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV
Sbjct: 181 LLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S++V +FFR+ W WP PV+L I++ L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGD 300
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP M +++NVS ST V++ + + G + +++ + + +WS LF + FF
Sbjct: 301 RFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFF 360
Query: 183 ES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
+ Y+ YL ++ + + + W G VES+LR L ++R + ++ HP+P +
Sbjct: 361 SADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 414
>gi|115397689|ref|XP_001214436.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
gi|114192627|gb|EAU34327.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
Length = 599
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 147/234 (62%), Gaps = 2/234 (0%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE VRSLNG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV W
Sbjct: 182 LRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+LVARVCQLYP A S++V +FFR+ W WP PV+L I++ L VW+P+ D+
Sbjct: 242 AMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDR 301
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++NVS ST V++ + Q G + +++ + + W+ LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATHNVSMSTKNVILRELQRGGDMVDKIFMKQLTWNDLFARHSFFT 361
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
+ Y+ YL++ + + W G VES++R L ++R + HP+P +
Sbjct: 362 KDYKYYLRITAASTTKEADSVWSGLVESKIRHLVGALDRKPTIAV-AHPFPKGF 414
>gi|326484929|gb|EGE08939.1| Poly(A) polymerase PAPalpha [Trichophyton equinum CBS 127.97]
Length = 601
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 151/235 (64%), Gaps = 2/235 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +R +NG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV
Sbjct: 181 LLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S++V +FFR+ W WP PV+L I++ L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGD 300
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP M +++NVS ST V++ + + G + +++ + + +WS LF + FF
Sbjct: 301 RFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFF 360
Query: 183 ES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
+ Y+ YL ++ + + + W G VES+LR L ++R + ++ HP+P +
Sbjct: 361 SADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 414
>gi|327293141|ref|XP_003231267.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
gi|326466383|gb|EGD91836.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
Length = 601
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 151/235 (64%), Gaps = 2/235 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +R +NG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV
Sbjct: 181 LLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S++V +FFR+ W WP PV+L I++ L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGD 300
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP M +++NVS ST V++ + + G + +++ + + +WS LF + FF
Sbjct: 301 RFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFF 360
Query: 183 ES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
+ Y+ YL ++ + + + W G VES+LR L ++R + ++ HP+P +
Sbjct: 361 SADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 414
>gi|410079098|ref|XP_003957130.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
gi|372463715|emb|CCF57995.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
Length = 567
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 156/232 (67%), Gaps = 2/232 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +VDE +R+LNG RV D+IL+LVP F LR +K WA+ R VY+NV GF GGV
Sbjct: 175 NLLRNVDEKDLRALNGTRVTDEILELVPKPIVFRIALRAIKLWAQNRAVYANVFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA +++++RFF++ + W+WP PV+L I++ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MP+ITPAYP M +++N++ ST +V++++F G I ++ +K WS LF + F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITDSTKKVILEEFSRGIQITNDIFSSKKSWSDLFNKHEF 354
Query: 182 FESYRNYLQVDI-VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F Y+ YL + A+ ++ L W G VES++R L L +E + K+ HP+
Sbjct: 355 FYKYKFYLTITASTRASDEEHLKWSGLVESKVRLLVLKLEALSGIKI-AHPF 405
>gi|401624879|gb|EJS42918.1| pap1p [Saccharomyces arboricola H-6]
Length = 569
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 155/236 (65%), Gaps = 2/236 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LR +K WA+RR VY+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA +++++RFF + + W WP PV+L I++ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MP+ITPAYP M +++N++ ST +V++ +F+ G I ++ NK W+ LFE F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKKVILKEFERGVQITNDIFSNKKSWANLFEKNDF 354
Query: 182 FESYRNYLQVDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
F Y+ YL++ +D+ L W G VES++R L + +E K+ HP+ +
Sbjct: 355 FYRYKFYLEITAYTRGSDEQHLKWGGLVESKVRLLIMKLEVLAGIKI-AHPFTKPF 409
>gi|302904195|ref|XP_003049022.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729956|gb|EEU43309.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 612
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 142/220 (64%), Gaps = 1/220 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +RSLNG RV D+IL LVP F LR +K WA+RR VY+N+ GF GGV
Sbjct: 181 LLRGLDEAELRSLNGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYANIMGFPGGVA 240
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A PS++V++FF V + WRWP PV+L I+ L VW+PR + D
Sbjct: 241 WAMLVARVCQLYPKATPSVIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPRVYKGD 300
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
H MP+ITPAYP M +++N++ S+++V+ + I E + + K WS LF + FF
Sbjct: 301 SFHLMPVITPAYPSMCATFNITRSSMKVINRELSRALQISESIMVGKRPWSDLFVKHTFF 360
Query: 183 -ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 221
+ Y+ Y+ V A + +D W G+VES++R L +E+
Sbjct: 361 TQGYKYYISVISSAKSKEDHKIWSGYVESKVRMLVQKLEQ 400
>gi|315043474|ref|XP_003171113.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
gi|311344902|gb|EFR04105.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
Length = 583
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 206/404 (50%), Gaps = 49/404 (12%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +R +NG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV
Sbjct: 181 LLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S++V +FFR+ W WP PV+L I++ L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGD 300
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP M +++NVS ST V++ + + G + +++ + + +WS LF + FF
Sbjct: 301 RFHLMPIITPAYPSMCATHNVSMSTKSVILRELRRGGDMVDKIFVGQRRWSDLFARHSFF 360
Query: 183 ES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTL----------MIERDTYG--KLQC 229
+ Y+ YL ++ + + W G VES+LR L I+ G K Q
Sbjct: 361 SADYKYYLSINSTSTTKEAQAIWSGLVESKLRHLGFERVHICKTDAEIDAVKAGSMKYQA 420
Query: 230 HPYPHEYVDTSKPCAHCA-----------------------------FFMGLQRKPGEVV 260
D + H A +++GL+ KP
Sbjct: 421 DDTKTATTDETNDPTHVAAAENANENVAIAEAEKPAEENKYTVYTTTYYIGLELKP-LAP 479
Query: 261 QEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQIPPYVFPEGYKRTRHPRLA 319
+ DI FK + + ++PG+ ++ +SH+R +P VF G R P+
Sbjct: 480 GASRSLDISSDTHMFKNTCTSWAQYQPGVNDLNISHVRNYDLPDDVFQPGEVRPTRPKKK 539
Query: 320 SQQRSSENGNEYQTGSGLKRKKDPES-----VDQDGPEKRQSIS 358
+++ ++ ++ +T + ++ PES V Q+G + +I+
Sbjct: 540 VVKKAEQSVSQKRTIDAVDGQELPESASKRHVSQNGMVTQATIA 583
>gi|400594797|gb|EJP62626.1| Poly(A) polymerase pla1 [Beauveria bassiana ARSEF 2860]
Length = 593
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 189/389 (48%), Gaps = 68/389 (17%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +RSLNG RV D+IL LVP F LR +K WA+RR VY N+ GF GGV
Sbjct: 185 LLRGLDEAELRSLNGTRVTDEILALVPEQSTFRLALRAIKLWAQRRAVYGNIMGFPGGVA 244
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S++V++FF V + WRWP PV+L I+ L VW+P+ + D
Sbjct: 245 WAMLVARVCQLYPKAATSVIVNKFFLVMSQWRWPQPVLLKPIENGPLPVRVWNPKVYKGD 304
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
H MPIITPAYP M +++N++ S++ ++ + Q G I E+V + K W+ LF + FF
Sbjct: 305 SFHLMPIITPAYPSMCATFNITRSSMTIIKRELQRGLEITEQVMVGKQSWNDLFVKHTFF 364
Query: 183 ES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV---- 237
+ Y+ Y+ V + D W G++ES++R L +E + L HP+ Y
Sbjct: 365 TTGYKYYISVVSASKARDAHKLWSGYIESKVRMLVQKLEHHPHIAL-AHPFVKGYSRRHL 423
Query: 238 ----------------------------------------------DTSKPCAHCAFFMG 251
TS ++G
Sbjct: 424 CKDETQIEQVQEGSLDFVVSDDVQLDGESNEQNGEQKEAAEGEAEKQTSSEVFTTTHYIG 483
Query: 252 LQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFW----KPGMEICVSHIRRKQIPPYVFP 307
L+ + G + D+ V+EFK+ + + KP + I V H+R +P VF
Sbjct: 484 LELEEG-----AKSLDLSYQVDEFKVLCTAWQKYQDELKPLVSIGVQHVRNFNLPDDVFG 538
Query: 308 EGYKRTRHPRLASQQRSSENGNEYQTGSG 336
K+ Q++SS+ N + G+
Sbjct: 539 ADEKK-------PQKKSSKGANGKKRGAA 560
>gi|323308211|gb|EGA61460.1| Pap1p [Saccharomyces cerevisiae FostersO]
Length = 568
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 154/236 (65%), Gaps = 2/236 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LR +K WA+RR VY+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA +++++RFF + + W WP PV+L I++ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MP+ITPAYP M +++N++ ST +V++ +F G I ++ NK W+ LFE F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDF 354
Query: 182 FESYRNYLQVDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
F Y+ YL++ +D+ L W G VES++R L + +E K+ HP+ +
Sbjct: 355 FFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF 409
>gi|398364849|ref|NP_012927.3| Pap1p [Saccharomyces cerevisiae S288c]
gi|266739|sp|P29468.1|PAP_YEAST RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|3527|emb|CAA46250.1| polyA polymerase 1 [Saccharomyces cerevisiae]
gi|4099|emb|CAA42852.1| poly(A)polymerase [Saccharomyces cerevisiae]
gi|486407|emb|CAA82072.1| PAP1 [Saccharomyces cerevisiae]
gi|151941547|gb|EDN59910.1| poly(A) polymerase [Saccharomyces cerevisiae YJM789]
gi|190409824|gb|EDV13089.1| poly(A) polymerase [Saccharomyces cerevisiae RM11-1a]
gi|259147834|emb|CAY81084.1| Pap1p [Saccharomyces cerevisiae EC1118]
gi|285813261|tpg|DAA09158.1| TPA: Pap1p [Saccharomyces cerevisiae S288c]
gi|323304127|gb|EGA57905.1| Pap1p [Saccharomyces cerevisiae FostersB]
gi|349579565|dbj|GAA24727.1| K7_Pap1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298143|gb|EIW09241.1| Pap1p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|228305|prf||1802393A poly(A) polymerase
Length = 568
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 154/236 (65%), Gaps = 2/236 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LR +K WA+RR VY+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA +++++RFF + + W WP PV+L I++ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MP+ITPAYP M +++N++ ST +V++ +F G I ++ NK W+ LFE F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDF 354
Query: 182 FESYRNYLQVDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
F Y+ YL++ +D+ L W G VES++R L + +E K+ HP+ +
Sbjct: 355 FFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF 409
>gi|406868090|gb|EKD21127.1| Poly(A) polymerase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 579
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 140/214 (65%), Gaps = 1/214 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++E RSLNG RVAD++L LVP + F T LR +K W+ RRG+ N+ GF GGV
Sbjct: 182 LLRGLEEQEARSLNGVRVADEMLTLVPQTKVFRTALRTIKLWSARRGIVGNIYGFPGGVA 241
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S +V +FF++ W+WP PV+L I+ L VW+P+ N D
Sbjct: 242 WAILVARVCQLYPKATGSTIVMKFFKIIDKWQWPQPVLLKNIETGTLNLQVWNPQINHTD 301
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP M +++NV+ ST+ V+ + + G I + V + KA+W LFE + FF
Sbjct: 302 RRHIMPIITPAYPSMCTTHNVTRSTMAVIHKELKRGGEIADRVMMGKAKWKDLFEKHTFF 361
Query: 183 -ESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 215
SY+ YL + + +++ W G+VES++R L
Sbjct: 362 TSSYKYYLCIITASTSSEAQTKWAGFVESKVRLL 395
>gi|63101121|gb|AAY33178.1| PAPa [Candida parapsilosis]
gi|354544642|emb|CCE41367.1| hypothetical protein CPAR2_303560 [Candida parapsilosis]
Length = 552
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 101/236 (42%), Positives = 151/236 (63%), Gaps = 2/236 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LR +K WA++R +Y+NV GF GGV
Sbjct: 174 NLLKNIDEKDMRALNGTRVTDEILRLVPKSTVFKNALRFVKMWAQQRAIYANVYGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV ++++ +FF++Y+ W WP PV+L I++ L VW+PR
Sbjct: 234 AWAMLVARICQLYPNAVSAVILEKFFQIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYAM 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N+++ST +++M +F G I V + WS L E + F
Sbjct: 294 DRQHRMPVITPAYPSMCATHNITSSTQKIIMSEFDRGVEIMNGVVSGQKSWSDLLERHDF 353
Query: 182 FESYRNYL-QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
F Y+ YL V +N ++ + G VES+LR L +E+ G HPY +
Sbjct: 354 FHKYKFYLCVVAATKSNTEEHSKYSGMVESKLRLLVQKLEQ-VEGVELAHPYVKSF 408
>gi|296415646|ref|XP_002837497.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633369|emb|CAZ81688.1| unnamed protein product [Tuber melanosporum]
Length = 587
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 102/231 (44%), Positives = 145/231 (62%), Gaps = 2/231 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L DE +R LNG RV D+IL LVP F LR +K WA+RR +Y+NV GF GGV
Sbjct: 180 LLRGCDEVNLRCLNGTRVTDEILTLVPKPGVFRMALRGIKLWAQRRAIYANVMGFPGGVA 239
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR+CQLYP AV ++++S+FF++ W WP PV+L I++ L VW+P+ D
Sbjct: 240 WAMLVARICQLYPMAVSAVVISKFFKILAHWTWPQPVLLKGIEDGPLSVRVWNPKIYPSD 299
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP M +++N++ ST +++ + ++ I + + + W LFE + FF
Sbjct: 300 RGHLMPIITPAYPSMCATHNITKSTKSIIIREMKHAAEIMDGIMVGNLSWDKLFERHSFF 359
Query: 183 ES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
+ YR YL V A + D LL W G VES+LR L + +E KL HP+
Sbjct: 360 TNGYRYYLSVVAAAKDKDTLLGWSGLVESKLRHLVMKLEILETIKL-AHPF 409
>gi|126030614|pdb|2HHP|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Closed
Conformation
Length = 530
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 154/236 (65%), Gaps = 2/236 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LR +K WA+RR VY+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA +++++RFF + + W WP PV+L I++ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MP+ITPAYP M +++N++ ST +V++ +F G I ++ NK W+ LFE F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDF 354
Query: 182 FESYRNYLQVDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
F Y+ YL++ +D+ L W G VES++R L + +E K+ HP+ +
Sbjct: 355 FFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF 409
>gi|268558234|ref|XP_002637107.1| C. briggsae CBR-PAP-1 protein [Caenorhabditis briggsae]
Length = 653
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/334 (35%), Positives = 185/334 (55%), Gaps = 30/334 (8%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D+ +VRSLNGCRVA+ +LKLVP + FC LR +K WAK G+YSN GF GG++
Sbjct: 180 LLRNLDQESVRSLNGCRVAELLLKLVPRQKEFCIALRAIKLWAKNHGIYSNSMGFFGGIS 239
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-----LGFSVWDPR 117
WA+LVAR CQLYPNA S +V R F +++ W WP+PV+L A+D+ L +WDPR
Sbjct: 240 WAILVARACQLYPNASASRIVHRMFFIFSTWTWPHPVLLSALDQDRNDIPTLCDLIWDPR 299
Query: 118 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 177
K D+ H MPIITPA+P NS++NV+ ST ++ ++ G IC+++ KA W LF+
Sbjct: 300 KKNSDRFHLMPIITPAFPEQNSTHNVTRSTCHIIRNEICEGLEICKDITEGKATWEDLFK 359
Query: 178 PYLFFESYRNYLQVD----IVAANADDLLAWKGWVESRLRQLTLMIERD-----TYGKLQ 228
FF Y++Y+ + I +L W+ ++ESR+R L +ER+ +
Sbjct: 360 EVKFFSRYKHYIGISDHGYIHRRRGIEL--WR-FLESRIRLLVQSLERNQDILIAHNDTN 416
Query: 229 CH-PYPHEYVDTSKPCAHCA-FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWK 286
H P P+ D +F+GL E + D+ ++ F+ ++ +
Sbjct: 417 KHRPSPNAKFDVRPENTRITIWFIGL-----EFAEHATNLDLTSEIQRFRTNVELQASGV 471
Query: 287 PGM------EICVSHIRRKQIPPYVFPEGYKRTR 314
G+ EI + +++R ++ + K+ R
Sbjct: 472 KGIGPNSQVEIDMFYMKRTRLFSIIGAAALKKGR 505
>gi|328351170|emb|CCA37570.1| poly(A) polymerase [Komagataella pastoris CBS 7435]
Length = 908
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 151/234 (64%), Gaps = 6/234 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL LVP F LR +K WA+RR VY NV GF GGV
Sbjct: 530 NLLKNIDEKDLRALNGTRVTDEILLLVPQPTVFKHALRAIKIWAQRRAVYGNVFGFPGGV 589
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV ++++S+FF + W WP PV+L I++ L VW+PR
Sbjct: 590 AWAMLVARICQLYPNAVSAVIISKFFVILGQWNWPQPVLLKPIEDGPLQVRVWNPRLYPH 649
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
DK H MP+ITPAYP M +++N++ ST +V++ +FQ G+ I E+ +WS LF + F
Sbjct: 650 DKYHKMPVITPAYPSMCATHNITESTKKVILQEFQRGSGIVTEIFSGAKKWSDLFTKHDF 709
Query: 182 FESYRNYLQVDIVAA---NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F Y+ YL V +AA ++++ + G VES+LR L +E + L HP+
Sbjct: 710 FRRYKFYLTV--IAATKGSSEEQKKFAGMVESKLRLLVQKLENNENINL-AHPF 760
>gi|10120664|pdb|1FA0|A Chain A, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
And 3'-Datp
gi|10120665|pdb|1FA0|B Chain B, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
And 3'-Datp
gi|188595983|pdb|3C66|A Chain A, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
80-105
gi|188595984|pdb|3C66|B Chain B, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
80-105
Length = 537
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 154/236 (65%), Gaps = 2/236 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LR +K WA+RR VY+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA +++++RFF + + W WP PV+L I++ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MP+ITPAYP M +++N++ ST +V++ +F G I ++ NK W+ LFE F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDF 354
Query: 182 FESYRNYLQVDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
F Y+ YL++ +D+ L W G VES++R L + +E K+ HP+ +
Sbjct: 355 FFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF 409
>gi|126031338|pdb|2O1P|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
State
gi|126031339|pdb|2O1P|B Chain B, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
State
Length = 546
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 154/236 (65%), Gaps = 2/236 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LR +K WA+RR VY+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA +++++RFF + + W WP PV+L I++ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MP+ITPAYP M +++N++ ST +V++ +F G I ++ NK W+ LFE F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDF 354
Query: 182 FESYRNYLQVDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
F Y+ YL++ +D+ L W G VES++R L + +E K+ HP+ +
Sbjct: 355 FFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF 409
>gi|158429647|pdb|2Q66|A Chain A, Structure Of Yeast Poly(A) Polymerase With Atp And
Oligo(A)
Length = 525
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 154/236 (65%), Gaps = 2/236 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LR +K WA+RR VY+N+ GF GGV
Sbjct: 171 NLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGV 230
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA +++++RFF + + W WP PV+L I++ L VW+P+ +
Sbjct: 231 AWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQ 290
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MP+ITPAYP M +++N++ ST +V++ +F G I ++ NK W+ LFE F
Sbjct: 291 DRSHRMPVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDF 350
Query: 182 FESYRNYLQVDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
F Y+ YL++ +D+ L W G VES++R L + +E K+ HP+ +
Sbjct: 351 FFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF 405
>gi|254567353|ref|XP_002490787.1| Poly(A) polymerase [Komagataella pastoris GS115]
gi|238030583|emb|CAY68507.1| Poly(A) polymerase [Komagataella pastoris GS115]
Length = 551
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 151/234 (64%), Gaps = 6/234 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL LVP F LR +K WA+RR VY NV GF GGV
Sbjct: 173 NLLKNIDEKDLRALNGTRVTDEILLLVPQPTVFKHALRAIKIWAQRRAVYGNVFGFPGGV 232
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV ++++S+FF + W WP PV+L I++ L VW+PR
Sbjct: 233 AWAMLVARICQLYPNAVSAVIISKFFVILGQWNWPQPVLLKPIEDGPLQVRVWNPRLYPH 292
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
DK H MP+ITPAYP M +++N++ ST +V++ +FQ G+ I E+ +WS LF + F
Sbjct: 293 DKYHKMPVITPAYPSMCATHNITESTKKVILQEFQRGSGIVTEIFSGAKKWSDLFTKHDF 352
Query: 182 FESYRNYLQVDIVAA---NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F Y+ YL V +AA ++++ + G VES+LR L +E + L HP+
Sbjct: 353 FRRYKFYLTV--IAATKGSSEEQKKFAGMVESKLRLLVQKLENNENINL-AHPF 403
>gi|340514098|gb|EGR44367.1| predicted protein [Trichoderma reesei QM6a]
Length = 620
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/255 (43%), Positives = 152/255 (59%), Gaps = 18/255 (7%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L +DE +RSLNG RV D+IL LVP F LR +K WA+RR VY+N+ GF GGV
Sbjct: 180 SLLRGLDEAELRSLNGTRVTDEILDLVPEKSTFRLALRAIKLWAQRRAVYANIMGFPGGV 239
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVARVCQLYP A S++V++FF V WRWP PV+L ID L VW+P+ +
Sbjct: 240 AWAMLVARVCQLYPKATMSVIVNKFFLVIGQWRWPQPVLLKPIDSGPLPVRVWNPKVYKG 299
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D H MP+ITPAYP M +++N++ S++ ++ + + G I E++ + K WS LF + F
Sbjct: 300 DSFHLMPVITPAYPSMCATFNITRSSMTIIQRELRRGLEISEQIMVGKRPWSDLFVKHTF 359
Query: 182 FES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
F S YR Y+ V + + + W G+VES++R L KL+ HP S
Sbjct: 360 FTSGYRYYISVISASKDKEAHKIWSGYVESKVRMLV--------QKLEQHP--------S 403
Query: 241 KPCAHCAFFMGLQRK 255
AH AF G R+
Sbjct: 404 IALAH-AFNKGYDRR 417
>gi|346322043|gb|EGX91642.1| Poly(A) polymerase [Cordyceps militaris CM01]
Length = 608
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 145/234 (61%), Gaps = 2/234 (0%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE +RSLNG RV D+IL LVP F LR +K WA+RR VY N+ GF GGV W
Sbjct: 182 LRGLDEAELRSLNGTRVTDEILSLVPEQSTFRLALRAIKLWAQRRAVYGNIMGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+LVARVCQLYP A S++V++FF V + WRWP PV+L I+ L VW+P+ + D
Sbjct: 242 AMLVARVCQLYPKAATSVIVNKFFLVMSQWRWPQPVLLKPIENGPLPVRVWNPKVYKGDS 301
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 183
H MPIITPAYP M +++N++ S++ ++ + Q G I E+V + K WS LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATFNITRSSMSIIKRELQRGLEISEQVMVGKQPWSDLFVKHTFFT 361
Query: 184 S-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
+ Y+ Y+ V + + W G++ES++R L +E+ + L HPY Y
Sbjct: 362 TGYKYYISVVSASKAKEPHKLWAGYIESKVRMLVQKLEQHPHIAL-AHPYVKGY 414
>gi|348688850|gb|EGZ28664.1| hypothetical protein PHYSODRAFT_474162 [Phytophthora sojae]
Length = 694
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 158/467 (33%), Positives = 233/467 (49%), Gaps = 50/467 (10%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
VL VD T +SLNG RV + ++KL PN E F + LR ++ WAKRRG+YSN G+LGGVN
Sbjct: 183 VLVGVDPATEKSLNGPRVTELMIKLTPNRESFISVLRIVRRWAKRRGLYSNKMGYLGGVN 242
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
W +LV + QLYP A PS L+ RFF V W+WP + LC +A LG VW+ +
Sbjct: 243 WCILVCFINQLYPTAAPSTLLLRFFMVLNNWKWPLAIQLCKTHDANLGLEVWNANAG-HN 301
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNK--AQWSALFEPYL 180
+ MPI+TPAYP MNSS+NVST +L VM ++F+ G TI ++V L+K ++W LFEP
Sbjct: 302 RYQVMPILTPAYPSMNSSFNVSTHSLTVMKEEFKRGLTIVQDV-LSKGGSEWGPLFEPSD 360
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCH------PYPH 234
FF +++YL V++ ++ AW G+ ESR+R+L +E Y C +P
Sbjct: 361 FFAVHQHYLAVEVYTEKQEEEAAWCGFCESRMRKL---VESLAYNPALCRLRAYTKKFPL 417
Query: 235 EYVDTSKPCA---------------HCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI 279
+V + A F++G ++ ++ I SVE FK +
Sbjct: 418 SFVTGGEAPAGEQPNGAALAQPSKFGVCFYVGFDIDRRQL--RSREVSIDNSVEYFK-NN 474
Query: 280 NMYMFWK--PGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGL 337
++Y + K P M++ V+ + K +P VF + R R+A ++ + + +
Sbjct: 475 DLYRWNKRTPTMDVRVTPVVWKALPESVFEDMGGRAVA-RVARREFMKKKKEDEKKAEEA 533
Query: 338 KRKKDPESVD------QDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKR 391
S D +DG E S QK SL+ D + +G GS +P PD
Sbjct: 534 AAPSPSPSGDEGTHSQEDGDELSCS---QKAASLAND------MANGKGSISQPGSPDPA 584
Query: 392 VLNQEIAEGGD-VSNSSVITSVTSEVGSCEDVGNESVAGSSEGNNGS 437
E+ G + V+N+ V GS E G G + GS
Sbjct: 585 ADGAEVTNGTESVNNTPVKPKKVVSSGSPEMTGKRDRDGKALAGAGS 631
>gi|296820828|ref|XP_002849998.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
gi|238837552|gb|EEQ27214.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
Length = 593
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 148/235 (62%), Gaps = 2/235 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +R +NG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV
Sbjct: 198 LLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 257
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S++V +FFR+ W WP PV+L I++ L VW+P+ D
Sbjct: 258 WAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGD 317
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP M +++N+S ST V++ + + G + + + + + +WS LF + FF
Sbjct: 318 RFHLMPIITPAYPSMCATHNISMSTKAVILRELRRGGDMVDNIFVGQRRWSDLFARHSFF 377
Query: 183 E-SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
Y+ YL ++ + + W G VES+LR L ++R + ++ HP+P +
Sbjct: 378 SGDYKYYLSINSTSTTKEAQAIWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 431
>gi|301118192|ref|XP_002906824.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262108173|gb|EEY66225.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 691
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 156/480 (32%), Positives = 241/480 (50%), Gaps = 55/480 (11%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
VL VD T +SLNG RV + ++KL PN E F + LR ++ WAKRRG+YSN G+LGGVN
Sbjct: 183 VLVGVDPATEKSLNGPRVTELMIKLTPNRESFISVLRIVRRWAKRRGLYSNKMGYLGGVN 242
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
W +LV + QLYP A PS L+ RFF V W+WP + LC +A+LG VW+ +
Sbjct: 243 WCILVCFINQLYPTAAPSTLLLRFFMVLNNWKWPLAIQLCKTHDAKLGLEVWNANAG-HN 301
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNK--AQWSALFEPYL 180
+ MPI+TPAYP MNSS+NVST +L VM ++F+ G TI ++V L+K ++W LFEP
Sbjct: 302 RYQVMPILTPAYPSMNSSFNVSTHSLTVMKEEFKRGLTIVQDV-LSKGGSEWGPLFEPSE 360
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCH------PYPH 234
FF +++YL V++ D+ AW + ESR+R+L +E Y C +
Sbjct: 361 FFAVHQHYLAVEVYTEKQDEEQAWCSFCESRMRKL---VESLAYNPALCRLRVYTKKFSL 417
Query: 235 EYVDT--------------SKPCAHCA-FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI 279
YV ++P A F++G ++ ++ I SVE FK +
Sbjct: 418 SYVTAGEAPVGGQSNGQPPAQPSKFGACFYVGFDIDRRQL--RSREVSIDSSVEYFK-NN 474
Query: 280 NMYMFWK--PGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGL 337
++Y + K P M++ V+ + K +P VF E RT A+++ + E + +
Sbjct: 475 DLYRWNKRTPTMDVRVTPVLWKALPESVFEEMGGRTVA--RAARREFMKKKKEEEKKAEE 532
Query: 338 KRKKDPESVDQDGPEKRQS----ISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVL 393
P +G ++ QK SL+ + + +G GS +P PD
Sbjct: 533 AAAPSPSPSGDEGTHSQEDGDDLTCSQKAASLA------TEMANGKGSISQPGSPDP--- 583
Query: 394 NQEIAEGGDVSNSSVITSVTSEVGSCEDVGNESVAGSSEGNNGSVEG----SNNPVSSQS 449
A+GG+V+ + + + + + G + ++ +VEG NP+S S
Sbjct: 584 ---AADGGEVNGTDSVNNTPVKAKQVVSTTSPEKTGKRDRDDKAVEGVGGSDGNPLSDNS 640
>gi|323452142|gb|EGB08017.1| hypothetical protein AURANDRAFT_27130 [Aureococcus anophagefferens]
Length = 449
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 113/258 (43%), Positives = 148/258 (57%), Gaps = 29/258 (11%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
+VL +DE +RSLNG RVA+ +L LVP+ F LR +K WA+ +G+YSNV G LGGV
Sbjct: 194 AVLEGLDEAAIRSLNGARVAEMLLSLVPDPAVFRVALRAVKRWARCKGLYSNVLGLLGGV 253
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI--------DEAELG-FS 112
N A+L A VCQ YPNA PS +V RFFR++ W WPNPV++ A DE+ ++
Sbjct: 254 NCAILAAFVCQRYPNAAPSTVVGRFFRIFDGWDWPNPVLIAAPGAPPSSAGDESVASRYA 313
Query: 113 VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW 172
W+PR N RD+ H PI+TPA+P MNSSYNV LR + D+ G VE A W
Sbjct: 314 AWNPRLNPRDRAHLAPIVTPAHPTMNSSYNVGAPQLRAIKDELSKGLETTRRVEKLAAHW 373
Query: 173 SA------------------LFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQ 214
A LF P FF +R+Y+QVD+ AA+ L W W ESRLR
Sbjct: 374 RADESPTGDRAADLRDAWRRLFAPSDFFARHRHYVQVDVSAADDAGLRKWNAWCESRLRN 433
Query: 215 LTLMIERDTYGKLQCHPY 232
L + + DT G ++ P+
Sbjct: 434 LVVAL--DTPGYVRARPH 449
>gi|440634435|gb|ELR04354.1| hypothetical protein GMDG_06729 [Geomyces destructans 20631-21]
Length = 598
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 140/232 (60%), Gaps = 2/232 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE +RSLNG RV D IL LVP F T LR +K WA+RR +Y+N+ GF GGV
Sbjct: 181 NLLRGLDEADLRSLNGTRVTDAILDLVPQKTIFRTALRGIKLWAQRRAIYANIIGFPGGV 240
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVARVCQLYP A S +V +FFR+ W+WP PV+L I L VW+PR +
Sbjct: 241 AWAMLVARVCQLYPKATSSTVVLKFFRIMEKWQWPTPVLLTHIASGPLQVKVWNPRIYKH 300
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D H MPIITPAYP M +++N++ ST ++ + + G I +++ K QW LF + F
Sbjct: 301 DSFHLMPIITPAYPSMCATHNITRSTKEIIQRELKRGGNITDQIMSGKLQWKDLFAKHTF 360
Query: 182 F-ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F E Y+ YL V + + W G VES++R L L +E L HP+
Sbjct: 361 FTEGYKYYLSVISASTTREAQNIWGGLVESKIRLLVLSLEGHDSIAL-AHPF 411
>gi|365764657|gb|EHN06179.1| Pap1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 488
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 99/236 (41%), Positives = 153/236 (64%), Gaps = 2/236 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LR +K WA+RR VY+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA +++++RFF + + W WP PV+L I++ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MP+ITPAYP M +++N++ T +V++ +F G I ++ NK W+ LFE F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITECTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDF 354
Query: 182 FESYRNYLQVDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
F Y+ YL++ +D+ L W G VES++R L + +E K+ HP+ +
Sbjct: 355 FFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF 409
>gi|378730028|gb|EHY56487.1| poly(A) polymerase [Exophiala dermatitidis NIH/UT8656]
Length = 611
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 151/225 (67%), Gaps = 6/225 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +D+PTVR++ G RV D+IL LVP + F T LR +K WA+RR +Y+N+ G+ GGV
Sbjct: 184 NLLMGLDQPTVRAVTGPRVTDEILSLVPEHKTFRTALRAIKLWAQRRAIYANIVGYPGGV 243
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE---AEL--GFSVWDP 116
WA+LVARVCQLYP+AV + +V +FF V + W WP PVML I++ A+L GF VW+P
Sbjct: 244 AWAMLVARVCQLYPHAVGATIVDKFFFVISHWDWPTPVMLKDIEQLKNADLNKGFRVWNP 303
Query: 117 RKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF 176
D+ + MPIITPA+P M ++YN+S S +V++++ + G I ++ KA+WS LF
Sbjct: 304 AIYPGDRKNIMPIITPAFPSMCATYNISKSGKKVILNELKRGGEITNKIFAGKAKWSDLF 363
Query: 177 EPYLFFES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE 220
+ + FF + ++ YL + + NAD AW G VES++R + +E
Sbjct: 364 KKHTFFTADHKYYLSITASSLNADSAKAWAGLVESKVRIFVMQLE 408
>gi|358383352|gb|EHK21019.1| hypothetical protein TRIVIDRAFT_78180 [Trichoderma virens Gv29-8]
Length = 575
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 100/221 (45%), Positives = 141/221 (63%), Gaps = 1/221 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L +DE +RSLNG RV D+IL LVP F LR +K WA+RR VY+N+ GF GGV
Sbjct: 184 SLLRGLDEAELRSLNGTRVTDEILALVPEESTFKLALRAIKLWAQRRAVYANIMGFPGGV 243
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVARVCQLYP A S++V++FF V WRWP PV+L I L VW+P+ +
Sbjct: 244 AWAMLVARVCQLYPKAATSVIVNKFFLVIGQWRWPQPVLLKPIGSGPLPVRVWNPKVYKG 303
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D H MP+ITPAYP M +++N++ S++ V+ + + G I E++ + K WS LF + F
Sbjct: 304 DSFHLMPVITPAYPSMCATFNITRSSMSVIQRELRRGLEISEQIMVGKRPWSDLFVKHTF 363
Query: 182 FES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 221
F S YR Y+ V + + + W G+VES++R L +E+
Sbjct: 364 FTSGYRYYISVVSASKDKEAHKVWSGYVESKVRMLVQKLEQ 404
>gi|403213836|emb|CCK68338.1| hypothetical protein KNAG_0A06840 [Kazachstania naganishii CBS
8797]
Length = 576
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 151/242 (62%), Gaps = 12/242 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LR +K WA+RR VY NV GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPIVFRIALRAIKLWAQRRAVYGNVFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNA +++++RFF++Y+ W+WP PV+L I++ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVIINRFFKIYSDWKWPQPVILKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D++H MP+ITPAYP M +++N++ ST +++ + Q G I ++ NK W+ LF+ + F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKSIILQELQRGIQITNDIFTNKKTWNDLFKRHDF 354
Query: 182 FESYRNYLQVDIVAA--NADD---------LLAWKGWVESRLRQLTLMIERDTYGKLQCH 230
F Y+ YL + DD L W G VES+ R L + +E G H
Sbjct: 355 FYKYKFYLTITASTREHTGDDGEKTGGDEQHLKWSGLVESKARLLVMKLEA-LEGIKVAH 413
Query: 231 PY 232
PY
Sbjct: 414 PY 415
>gi|397635329|gb|EJK71816.1| hypothetical protein THAOC_06705 [Thalassiosira oceanica]
Length = 629
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/323 (37%), Positives = 178/323 (55%), Gaps = 27/323 (8%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPN---VEHFCTTLRCLKFWAKRRGVYSNVTGFL 58
S+L +DE +VRS+NG RVA +L + + +E++ TLR +K WA+ +G+YSNV G+L
Sbjct: 263 SLLVGLDEASVRSVNGVRVAQYLLSTMSSPRQLENYRLTLRAVKEWARVQGMYSNVLGYL 322
Query: 59 GGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAEL------GFS 112
GGVNWA+LV VC +P+A + L+ FF + W WP+PVML +
Sbjct: 323 GGVNWAILVCFVCIRHPDASSARLLHLFFETFANWNWPDPVMLTPEASRHVPPRNVDARP 382
Query: 113 VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV------- 165
VWDPR+N RDK H MPIITP YP MNSS+NV LR M D+F+ + E+
Sbjct: 383 VWDPRENYRDKLHVMPIITPCYPSMNSSFNVGEPGLRRMRDEFRRAARVSREILSGTATG 442
Query: 166 ELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYG 225
E K WS+LFE FF + YL+VD+ A D+ L W G E+R+R L +E D
Sbjct: 443 EDGKKGWSSLFERSGFFGQHGAYLRVDVAATTEDEFLRWFGLCEARMRLLIAGLESD--- 499
Query: 226 KLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGS--VEEFKLSINMYM 283
+++ +P+ Y +K +FF+ L+ G D+R V E+ +N +
Sbjct: 500 EIRAYPFARFYRRDTKEEYVSSFFVALR------FASGVDRDVRWGERVSEYLHVVNSFE 553
Query: 284 FWKPGMEICVSHIRRKQIPPYVF 306
GM++ + ++R +P +VF
Sbjct: 554 GRTAGMDLRLELLKRADLPRFVF 576
>gi|154316305|ref|XP_001557474.1| hypothetical protein BC1G_03738 [Botryotinia fuckeliana B05.10]
Length = 544
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 142/232 (61%), Gaps = 2/232 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE +RSLNG RV D IL LVP F T LR +K WA+RR +Y+N+ GF GGV
Sbjct: 181 NLLTGLDEAGLRSLNGTRVTDDILNLVPEKAVFRTALRGVKLWAQRRAIYANIMGFPGGV 240
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVARVCQLYP A S ++ +FFR+ + W+WP PV+L AI +L VW+PR +
Sbjct: 241 AWAMLVARVCQLYPQATASTVILKFFRIMSQWQWPQPVLLQAIKGGKLNVRVWNPRVYKG 300
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D H MPIITP+YP M +++N++ ST ++ + G I + + KA W LF + F
Sbjct: 301 DGYHLMPIITPSYPSMCATHNITKSTKEIICRELARGGNITDRIMTGKASWKDLFVKHTF 360
Query: 182 F-ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F ++Y+ YL V + + L W G VES++R L +E L HP+
Sbjct: 361 FTKNYKYYLSVISASTTKEAQLIWAGLVESKVRLLVANVENHESIAL-AHPF 411
>gi|46122023|ref|XP_385565.1| hypothetical protein FG05389.1 [Gibberella zeae PH-1]
Length = 624
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 144/235 (61%), Gaps = 2/235 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +RSLNG RV D+IL LVP F LR +K WA+RR VY+N+ GF GGV
Sbjct: 181 LLRGLDEAELRSLNGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVA 240
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A P+++V++FF V + WRWP PV+L I+ L VW+P+ + D
Sbjct: 241 WAMLVARVCQLYPKATPAVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRVWNPKLYKGD 300
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
H MP+ITPAYP M +++N++ S++ ++ + + I E + + WS LF + FF
Sbjct: 301 TFHLMPVITPAYPSMCATFNITRSSMTIINRELKRALQISESIMVGMRPWSDLFAKHSFF 360
Query: 183 ES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
+ Y+ Y+ V A + W G+VES++R L +E+ L HP+ Y
Sbjct: 361 TAGYKYYISVISAAKTKESHTIWSGYVESKVRMLVQKLEQHQSIAL-AHPFNKGY 414
>gi|170040884|ref|XP_001848213.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
gi|167864495|gb|EDS27878.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
Length = 395
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 141/219 (64%), Gaps = 6/219 (2%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D VRSLNGCR D+IL+ VPN+++F LR +K WAK+ G+YSN G+ GGV+
Sbjct: 165 LLKNLDPKLVRSLNGCRATDEILRPVPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVS 224
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
W +LVAR CQL PN V + V +FF V+ W+WP PV L D LGF VWD R N +D
Sbjct: 225 WGMLVARTCQL-PNVVAATQVHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQD 283
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H M IITPAYP NS+++VS+ST +VM+++F I +E+ L KA W LFE FF
Sbjct: 284 RFHLMSIITPAYPQQNSTFHVSSSTRKVMLNEFNSDMQITDEIMLGKAGWDKLFEAPSFF 343
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 221
YR ++ + + + N DD L ES++R L +ER
Sbjct: 344 FKYRYFIVLLVTSNNTDDHLE-----ESKIRYLIQNLER 377
>gi|345563932|gb|EGX46915.1| hypothetical protein AOL_s00097g341 [Arthrobotrys oligospora ATCC
24927]
Length = 1294
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 138/220 (62%), Gaps = 1/220 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE +RSLNG RV D+IL LVP F LR +K WAK + +Y NV GF GGV
Sbjct: 864 NLLRGLDEKELRSLNGTRVTDEILTLVPAPAVFKHALRAIKIWAKCKAIYGNVYGFPGGV 923
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYP+AV +++VS+FFR+ W WP PV+L I++ L VW+PR
Sbjct: 924 AWAMLVARICQLYPSAVSAVIVSKFFRILGQWAWPQPVLLKPIEDGPLNVRVWNPRLYPS 983
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
DK H MPIITPAYP M S++N++ ST ++ + I + + K W LFE + F
Sbjct: 984 DKNHLMPIITPAYPSMCSTHNITPSTKAAILGEMAKAADIVDRIITGKGNWKQLFERHTF 1043
Query: 182 F-ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE 220
F + Y+ YL V+ A + + W G VES++R L + +E
Sbjct: 1044 FTKDYKYYLAVNASAKEQEASVKWSGLVESKIRHLVMKLE 1083
>gi|149237693|ref|XP_001524723.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
gi|146451320|gb|EDK45576.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
Length = 587
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 148/234 (63%), Gaps = 6/234 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL LVP F LR +K WA++R +Y+NV GF GGV
Sbjct: 176 NLLKNIDEKDLRALNGTRVTDEILNLVPKPTVFKHALRFIKMWAQQRAIYANVYGFPGGV 235
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV S +V +FF++Y+ W WP PV+L I++ L VW+P+
Sbjct: 236 AWAMLVARICQLYPNAVSSYIVEKFFQIYSQWSWPQPVLLKQIEDGPLQVRVWNPKLYSL 295
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N++ ST ++++D+FQ G TI + W L + + F
Sbjct: 296 DRQHRMPVITPAYPSMCATHNITASTQKIILDEFQRGTTIMHGILDGTKNWLDLLQRHDF 355
Query: 182 FESYRNYLQVDIVAANA---DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F Y+ YL V VAA ++ L + G ES+LR L +E G HPY
Sbjct: 356 FHRYKFYLCV--VAATKSTYEEHLKYSGMFESKLRLLVQKLEM-VPGVELAHPY 406
>gi|302846120|ref|XP_002954597.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
nagariensis]
gi|300260016|gb|EFJ44238.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
nagariensis]
Length = 410
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 136/223 (60%), Gaps = 4/223 (1%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
+VL DE TVRSLNGCRV D IL+LVPN + F LR +K WA RG+ SNVTG+LGGV
Sbjct: 179 AVLRGCDEATVRSLNGCRVTDTILRLVPNQDVFRLALRAVKHWASLRGISSNVTGYLGGV 238
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
N A++VA++CQLYP A S ++ +FF + W WP + L ++ +G VWDPR R
Sbjct: 239 NLAIMVAKICQLYPRAEASTVLLKFFILLKAWPWPRAIHLRVPEDHSMGLPVWDPRPGTR 298
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKA----QWSALFE 177
D MP+ITPAYP MNS YNV STL VM +F +C + W LF
Sbjct: 299 DSLALMPVITPAYPAMNSLYNVQRSTLEVMTAEFAAAAEVCTSFLRCRGGQPLDWDRLFM 358
Query: 178 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE 220
P FF + Y+Q+++ A + DL+ W GWV SR+R+L +E
Sbjct: 359 PVPFFTQHTFYIQIEVSADSEQDLVLWDGWVSSRIRRLVRNLE 401
>gi|346972005|gb|EGY15457.1| Poly(A) polymerase pla1 [Verticillium dahliae VdLs.17]
Length = 604
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 141/221 (63%), Gaps = 1/221 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE +RSLNG RV D+I+ LVP F LR +K WA+RR +Y+N+ GF GGV
Sbjct: 183 NLLRGLDERELRSLNGTRVTDEIINLVPEPSTFRLALRAIKLWAQRRAIYANIMGFPGGV 242
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVARVCQLYP A S++V++FF + W WP PV+L A++E L VW+P+ R
Sbjct: 243 AWAMLVARVCQLYPKATSSVIVNKFFHIMRRWPWPQPVLLKAVEEGPLQVRVWNPKLYRG 302
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP M +++N++ S + V+ + Q G I + V L+K W LF + F
Sbjct: 303 DQFHLMPIITPAYPSMCATFNITKSAMTVIQRELQRGCEITDNVMLSKRPWGDLFIKHTF 362
Query: 182 FES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 221
F S Y+ Y+ V + + W G+VES++R L +E+
Sbjct: 363 FTSGYKYYISVVTTSTTKEAHKIWSGYVESKVRVLVQGLEQ 403
>gi|347827997|emb|CCD43694.1| similar to Poly(A) polymerase [Botryotinia fuckeliana]
Length = 573
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 142/232 (61%), Gaps = 2/232 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE +RSLNG RV D IL LVP F T LR +K WA+RR +Y+N+ GF GGV
Sbjct: 181 NLLTGLDEAGLRSLNGTRVTDDILNLVPEKAVFRTALRGVKLWAQRRAIYANIMGFPGGV 240
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVARVCQLYP A S ++ +FFR+ + W+WP PV+L AI +L VW+PR +
Sbjct: 241 AWAMLVARVCQLYPQATASTVILKFFRIMSQWQWPQPVLLQAIKGGKLNVRVWNPRVYKG 300
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D H MPIITP+YP M +++N++ ST ++ + G I + + KA W LF + F
Sbjct: 301 DGYHLMPIITPSYPSMCATHNITKSTKEIICRELARGGNITDRIMTGKASWKDLFVKHTF 360
Query: 182 F-ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F ++Y+ YL V + + L W G VES++R L +E L HP+
Sbjct: 361 FTKNYKYYLSVISASTTKEAQLIWAGLVESKVRLLVANVENHESIAL-AHPF 411
>gi|322695698|gb|EFY87502.1| Poly(A) polymerase [Metarhizium acridum CQMa 102]
Length = 570
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 108/254 (42%), Positives = 151/254 (59%), Gaps = 18/254 (7%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +RSLNG RV D+IL LVP F LR +K WA+RR VY N+ GF GGV
Sbjct: 181 LLRGLDEAELRSLNGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYGNIMGFPGGVA 240
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S++V++FF V + WRWP PV+L I+ L VW+P+ + D
Sbjct: 241 WAMLVARVCQLYPKAATSVIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPKIYKGD 300
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
H MP+ITPAYP M +++N+S S++ ++ + + G I E + + K WS LF + FF
Sbjct: 301 SFHLMPVITPAYPSMCATFNISRSSMAIINRELRRGLEISESIMVGKQPWSDLFVKHTFF 360
Query: 183 ES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
S Y+ Y+ V + + + W G+VES++R L KL+ HP S
Sbjct: 361 TSDYKYYISVISASKSKEAHNVWSGYVESKVRMLV--------QKLEQHP--------SI 404
Query: 242 PCAHCAFFMGLQRK 255
AH AF G +R+
Sbjct: 405 ALAH-AFNKGYERR 417
>gi|322709453|gb|EFZ01029.1| Poly(A) polymerase [Metarhizium anisopliae ARSEF 23]
Length = 572
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 108/254 (42%), Positives = 151/254 (59%), Gaps = 18/254 (7%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +RSLNG RV D+IL LVP F LR +K WA+RR VY N+ GF GGV
Sbjct: 181 LLRGLDEAELRSLNGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYGNIMGFPGGVA 240
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S++V++FF V + WRWP PV+L I+ L VW+P+ + D
Sbjct: 241 WAMLVARVCQLYPKAATSVIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPKIYKGD 300
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
H MP+ITPAYP M +++N+S S++ ++ + + G I E + + K WS LF + FF
Sbjct: 301 SFHLMPVITPAYPSMCATFNISRSSMAIINRELRRGLEISESIMVGKRPWSDLFVKHTFF 360
Query: 183 ES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
S Y+ Y+ V + + + W G+VES++R L KL+ HP S
Sbjct: 361 TSDYKYYISVISASKSKEAHNVWSGYVESKVRMLV--------QKLEQHP--------SI 404
Query: 242 PCAHCAFFMGLQRK 255
AH AF G +R+
Sbjct: 405 ALAH-AFNKGYERR 417
>gi|444722668|gb|ELW63351.1| Poly(A) polymerase gamma [Tupaia chinensis]
Length = 554
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 96/155 (61%), Positives = 116/155 (74%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L +D +RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 123 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 182
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N
Sbjct: 183 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 242
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQ 156
D+ H MPIITPAYP NS+YNVSTST VM+++F+
Sbjct: 243 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFK 277
>gi|408391167|gb|EKJ70549.1| hypothetical protein FPSE_09302 [Fusarium pseudograminearum CS3096]
Length = 711
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 144/235 (61%), Gaps = 2/235 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +RSLNG RV D+IL LVP F LR +K WA+RR VY+N+ GF GGV
Sbjct: 181 LLRGLDEAELRSLNGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVA 240
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A P+++V++FF V + WRWP PV+L I+ L VW+P+ + D
Sbjct: 241 WAMLVARVCQLYPKATPAVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRVWNPKLYKGD 300
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
H MP+ITPAYP M +++N++ S++ ++ + + I E + + WS LF + FF
Sbjct: 301 TFHLMPVITPAYPSMCATFNITRSSMTIINRELKRALQISESIMVGMRPWSDLFAKHSFF 360
Query: 183 ES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
+ Y+ Y+ V A + W G+VES++R L +E+ L HP+ Y
Sbjct: 361 TAGYKYYISVISAAKTKESHTIWSGYVESKVRMLVQKLEQHQSIAL-AHPFNKGY 414
>gi|320586365|gb|EFW99044.1| pap-like poly(A) polymerase [Grosmannia clavigera kw1407]
Length = 596
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 141/221 (63%), Gaps = 1/221 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE +RS+NG RV D+IL LVP F LR +K WA+RR +Y+N+ GF GGV
Sbjct: 181 NLLRGLDEAELRSVNGTRVTDEILSLVPEQRTFRDALRAIKLWAQRRAIYANIVGFPGGV 240
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA++VARVCQLYP A +++VS+FF + W WPNPV+L I++ L VW+P+ R
Sbjct: 241 AWAMMVARVCQLYPKATGAVIVSKFFGIILRWPWPNPVLLKPIEDGPLPVRVWNPKVYRG 300
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP M ++YN+S S+L ++ + + + I + + + QW LF + F
Sbjct: 301 DQFHIMPIITPAYPSMCATYNISQSSLSIIKRELERASEISQMIISGRQQWKDLFVKHTF 360
Query: 182 FES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 221
F S Y+ Y+ V + D W G+VES++R L +ER
Sbjct: 361 FTSDYKYYISVISASTEKDAQNTWSGFVESKVRVLVQGLER 401
>gi|119620437|gb|EAX00032.1| poly(A) polymerase gamma, isoform CRA_d [Homo sapiens]
Length = 430
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/277 (39%), Positives = 161/277 (58%), Gaps = 8/277 (2%)
Query: 56 GFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWD 115
GFLGGV+WA+LVAR CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWD
Sbjct: 3 GFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWD 62
Query: 116 PRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSAL 175
PR N D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L
Sbjct: 63 PRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKL 122
Query: 176 FEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHE 235
EP FF+ YR+Y+ + A+ ++ L W G VES++R L +ER+ + L H P
Sbjct: 123 LEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQS 181
Query: 236 YVDTSKPCAH----CAFFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG 288
+ + +F+G+ + + E V +DI+ + N K G
Sbjct: 182 FPGNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEG 241
Query: 289 MEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 325
M+I +H+++KQ+ Y+ E ++ + L+ RSS
Sbjct: 242 MKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSS 278
>gi|325180233|emb|CCA14636.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 677
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/342 (37%), Positives = 189/342 (55%), Gaps = 44/342 (12%)
Query: 1 MSVLND-----VDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVT 55
+++LND VD T +SLNG RV + ++KL PN + F + LR ++ WAKRRG+YSN
Sbjct: 176 LNILNDQILVGVDAATEKSLNGPRVTELMIKLTPNRDSFISVLRIVRRWAKRRGLYSNKM 235
Query: 56 GFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWD 115
G+LGGVNW +LV + QLYP A P+ L+ RFF V W+WP + LC ++ +LG VW+
Sbjct: 236 GYLGGVNWCILVCFINQLYPTAAPTTLLLRFFMVLANWKWPLAIQLCKTEDVKLGLEVWN 295
Query: 116 PRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNK--AQWS 173
++ H MPI+TPAYP MNSS+NVST +L VM +F+ I +E+ LN+ +W
Sbjct: 296 ANVG-NNRYHVMPILTPAYPSMNSSFNVSTHSLAVMKQEFERALKIVQEI-LNRGAVEWD 353
Query: 174 ALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCH--- 230
LFE FF ++YL VD+ N +D AW + ESR+R+L IE Y + CH
Sbjct: 354 PLFESSDFFAVQQHYLAVDVYTTNREDEQAWCSFCESRIRKL---IESLAYIPMLCHLRA 410
Query: 231 ---PYPHEYV-------------------DTSKPCAHCAFFMGLQRKPGEVVQEGQQFDI 268
+P +V +T K A F++G ++ ++ I
Sbjct: 411 FPKRFPLSFVGQDQDEKIETPTDRNNEEKETFKYGA--CFYVGFDIDRRQL--RSREVSI 466
Query: 269 RGSVEEFKLSINMYMFWK--PGMEICVSHIRRKQIPPYVFPE 308
SV+ FK + ++Y + K M++ ++ + K +P YVF E
Sbjct: 467 DSSVDYFKHN-DLYRWNKRSDSMDVRITPVLWKNLPDYVFEE 507
>gi|342870120|gb|EGU73417.1| hypothetical protein FOXB_16055 [Fusarium oxysporum Fo5176]
Length = 635
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 139/220 (63%), Gaps = 1/220 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +RSLNG RV D+IL LVP F LR +K WA+RR VY+N+ GF GGV
Sbjct: 181 LLRGLDEAELRSLNGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVA 240
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S++V++FF V + WRWP PV+L I+ L +W+P+ + D
Sbjct: 241 WAMLVARVCQLYPKATFSVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRIWNPKLYKGD 300
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
H MP+ITPAYP M +++N++ S++ ++ + + I E + + K WS LF + FF
Sbjct: 301 TYHLMPVITPAYPSMCATFNITRSSMAIINRELKRALQISESIMVGKRPWSDLFVKHTFF 360
Query: 183 ES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 221
+ Y+ Y+ V A + W G+VES++R L +E+
Sbjct: 361 TAGYKYYISVTSAAKTKEAHTIWSGYVESKVRMLVQKLEQ 400
>gi|310798369|gb|EFQ33262.1| hypothetical protein GLRG_08406 [Glomerella graminicola M1.001]
Length = 631
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 94/220 (42%), Positives = 140/220 (63%), Gaps = 1/220 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +RSLNG RV D+IL LVP F LR +K WA+RR +Y+N+ GF GGV
Sbjct: 186 LLRGLDEAELRSLNGTRVTDEILSLVPEQATFKLALRAIKLWAQRRAIYANIMGFPGGVA 245
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S++V++FF + W WP PV+L ++ L VW+P+ + D
Sbjct: 246 WAMLVARVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKHVEGGPLQVRVWNPKLYKGD 305
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MP+ITPAYP M ++YN++ S + V+ + Q G I + + L ++ WS LF + FF
Sbjct: 306 QFHLMPVITPAYPSMCATYNITRSAMTVIQQELQRGCDITDAIMLGRSPWSDLFVKHTFF 365
Query: 183 -ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 221
+ Y+ Y+ V + + + W G+VES++R L +E+
Sbjct: 366 TQGYKYYISVITSSTDKEAHKVWSGYVESKVRVLVQGLEQ 405
>gi|395823522|ref|XP_003785035.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Otolemur garnettii]
Length = 735
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 174/299 (58%), Gaps = 13/299 (4%)
Query: 12 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 71
+RSLNGC++ ++IL LV N+++F TLRC+K WAK VYSN+ GF+ GV+WA+L AR C
Sbjct: 199 IRSLNGCKITNEILHLVSNMDNFRLTLRCIKLWAKHHTVYSNILGFVTGVSWAMLGARTC 258
Query: 72 QLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIIT 131
QLYP A+ S LV FF V++ W PNPV++ ++ L VWD R N D+ PIIT
Sbjct: 259 QLYPIAMASTLVHXFFLVFSKWEXPNPVLVKQPEKCNLNLPVWDSRVNPSDRYQFAPIIT 318
Query: 132 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 191
PAYP NS+Y+ S ST V++++F+ +I + + L+K + S LFE +FF+ Y++Y+ +
Sbjct: 319 PAYPQQNSTYSASISTQMVVVEEFKXSLSITDXL-LSKVEXSKLFEAPIFFQKYKDYIVL 377
Query: 192 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHC 246
A L W G VES++ L +E++ + L Q P P E D + C
Sbjct: 378 LAGAPTEKQRLEWVGLVESKIXILIGSLEKNEFITLAHVNPQAFPAPKENPDKKEFCT-- 435
Query: 247 AFFMGLQRKPGEVVQE---GQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 301
+ +GL K E + DI+ + ++ + N MF + M I +H++RKQ+
Sbjct: 436 VWVIGLVFKKTENYKNLSVNLXHDIQAFTDTVYRQARNSKMF-EVDMRIAATHVKRKQL 493
>gi|19073993|ref|NP_584599.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
gi|19068635|emb|CAD25103.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
gi|449329262|gb|AGE95535.1| poly (a) polymerase type 1 [Encephalitozoon cuniculi]
Length = 505
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 178/317 (56%), Gaps = 22/317 (6%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE + SLNG RV D++L LVP+V+ F + LRC+K+WAKRR VY N G+ GGV
Sbjct: 177 TLLKSMDEKCILSLNGSRVTDEMLNLVPSVKTFHSALRCIKYWAKRRCVYGNPYGYFGGV 236
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
++L VARVCQLYPNA +V +FF +++ W+WP PV+L + + VWDP+
Sbjct: 237 AFSLCVARVCQLYPNASSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPS 296
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
DK H MP+ITPAYP M +++NVS ST V+ +F + I + E N + +FE F
Sbjct: 297 DKYHRMPVITPAYPSMCATHNVSNSTQHVITMEFTRAHKILSDPERN--DFRRIFELSDF 354
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY----- 236
F YR +++V +++ +D W+G++ES++R L E L P+P +
Sbjct: 355 FSRYRLFVEVLAMSSCEEDFPKWEGYLESKIRILASKFE-AVDDVLYAIPFPKAFRVAEE 413
Query: 237 --------VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG 288
++ K C AFF+ + P +G++ + V+EF + Y G
Sbjct: 414 SIEKIGPRMEGMKKCT--AFFIAIDVIP----VKGKKVIVEQQVKEFIEFVREYEGRASG 467
Query: 289 MEICVSHIRRKQIPPYV 305
M I V+ ++RK + ++
Sbjct: 468 MRIEVNSLKRKDVQGFL 484
>gi|51900536|gb|AAU13916.1| PAP alpha [Candida dubliniensis]
Length = 360
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 142/216 (65%), Gaps = 6/216 (2%)
Query: 27 LVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRF 86
LVP F LRC+K WA++R VY N+ GF GGV WA+LVAR+CQLYPNAV S++V +F
Sbjct: 1 LVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSSVIVEKF 60
Query: 87 FRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTS 146
F +YT W WP PV+L +I++ L VW+PR D+ H MP+ITPAYP M +++N+++S
Sbjct: 61 FNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCATHNITSS 120
Query: 147 TLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA---NADDLLA 203
T +V++ + G++I +++ K WS LFE + FF Y+ YL V VAA +A++
Sbjct: 121 TQKVILAELSRGSSIMQDIHAGKKSWSDLFEKHCFFYKYKFYLCV--VAATIDSAEEHKK 178
Query: 204 WKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 239
W G++ES+LRQL L +E G HPY ++ T
Sbjct: 179 WSGFIESKLRQLVLKLEVAE-GVEIAHPYVKDFSHT 213
>gi|302409142|ref|XP_003002405.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
gi|261358438|gb|EEY20866.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
Length = 575
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 96/217 (44%), Positives = 140/217 (64%), Gaps = 1/217 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE +RSLNG RV D+I+ LVP F LR +K WA+RR +Y+N+ GF GGV
Sbjct: 183 NLLRGLDERELRSLNGTRVTDEIINLVPEPSTFRLALRAIKLWAQRRAIYANIMGFPGGV 242
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVARVCQLYP A S++V++FF + W WP PV+L A++E L VW+P+ R
Sbjct: 243 AWAMLVARVCQLYPKATSSVIVNKFFHIMRRWPWPQPVLLKAVEEGPLQVRVWNPKLYRG 302
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP M +++N++ S + V+ + Q G I + V L+K W LF + F
Sbjct: 303 DQFHLMPIITPAYPSMCATFNITKSAMTVIQRELQRGCEITDNVMLSKRPWGDLFIKHTF 362
Query: 182 FES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTL 217
F S Y+ Y+ V + + W G+VES++++ +L
Sbjct: 363 FTSGYKYYISVVTTSTTKEAHKIWSGYVESKVQEGSL 399
>gi|380471549|emb|CCF47226.1| hypothetical protein CH063_04087 [Colletotrichum higginsianum]
Length = 619
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 94/220 (42%), Positives = 139/220 (63%), Gaps = 1/220 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +RSLNG RV D+IL LVP F LR +K WA+RR +Y+N+ GF GGV
Sbjct: 186 LLRGLDEAELRSLNGTRVTDEILSLVPEQATFKLALRAIKLWAQRRAIYANIMGFPGGVA 245
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S++V++FF + W WP PV+L ++ L VW+P+ + D
Sbjct: 246 WAMLVARVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKQVEGGPLQVRVWNPKLYKGD 305
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MP+ITPAYP M ++YN++ S + V+ + Q G I + + L + WS LF + FF
Sbjct: 306 QFHLMPVITPAYPSMCATYNITRSAMTVIQQELQRGCDITDAIMLGRNPWSDLFVKHTFF 365
Query: 183 -ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 221
+ Y+ Y+ V + + + W G+VES++R L +E+
Sbjct: 366 TQGYKYYISVITSSTDKEAHKVWSGYVESKVRVLVQGLEQ 405
>gi|256066067|ref|XP_002570474.1| poly(A) polymerase [Schistosoma mansoni]
gi|350644967|emb|CCD60333.1| poly(A) polymerase, putative [Schistosoma mansoni]
Length = 496
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 141/234 (60%), Gaps = 5/234 (2%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
++ ++DE VRS+NG RV + IL LV N F L+ ++ WAKRR VYSN GFLGGV+
Sbjct: 187 LMRNMDERDVRSINGVRVTEDILNLVYNKNSFKVALKVIRIWAKRRNVYSNALGFLGGVS 246
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-AELGFSVWDPRKNRR 121
WA+LV+R+CQLYP A PSM+V FF +++ W WP PV L + A L VWDPR N
Sbjct: 247 WAILVSRICQLYPYATPSMIVYLFFTIFSQWPWPKPVRLRECEYIASLCLPVWDPRLNPS 306
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPI+TP+YP NS+YNV S ++ + + G + ++K WS LFE F
Sbjct: 307 DQYHLMPILTPSYPSQNSTYNVQRSNRIIIERELKQGLNVVRASMMHKGSWSNLFEAAFF 366
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL---QCHPY 232
F+ YR+Y+ V +V + G VESRLR L E + Y K+ CH Y
Sbjct: 367 FQ-YRHYVVVIVVGNTKHTFIELCGLVESRLRVLVSNFEVNRYVKMAHVNCHAY 419
>gi|396080920|gb|AFN82540.1| poly (A) polymerase type 1 [Encephalitozoon romaleae SJ-2008]
Length = 505
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 115/315 (36%), Positives = 176/315 (55%), Gaps = 18/315 (5%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE + SLNG RV D++L LVPNV+ F + LRC+K+WAKRR VY N G+ GGV
Sbjct: 177 TLLKSMDEKCILSLNGSRVTDEMLNLVPNVKAFHSALRCIKYWAKRRCVYGNPYGYFGGV 236
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
++L VARVCQLYPNA +V +FF +++ W+WP PV+L + + VWDP+
Sbjct: 237 AFSLCVARVCQLYPNASSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPS 296
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
DK H MP+ITPAYP M +++NVS ST V+ +F + I +E N + +FE F
Sbjct: 297 DKYHRMPVITPAYPSMCATHNVSNSTQHVITMEFSRAHEILSNLEKN--DFRRIFELSDF 354
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP------HE 235
F Y+ +++V ++ + W+G+VESR+R L E L P+P E
Sbjct: 355 FGRYKLFVEVLAMSTLEEGFTKWEGYVESRIRILASKFEA-VDDILYAIPFPKAFRVLEE 413
Query: 236 YVDTSKPCAH-----CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 290
+ KP A AFF+ + P +G++ + V+EF + Y + M
Sbjct: 414 SIGKIKPGAEEVKRCTAFFIAIDVIP----VKGKKVVVEQQVKEFMEFVKEYEGKESNMW 469
Query: 291 ICVSHIRRKQIPPYV 305
I ++ ++RK + ++
Sbjct: 470 IEINSLKRKDVQGFL 484
>gi|401825414|ref|XP_003886802.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
gi|392997958|gb|AFM97821.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
Length = 506
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 115/315 (36%), Positives = 176/315 (55%), Gaps = 18/315 (5%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE + SLNG RV D++L LVPNV+ F + LRC+K+WAKRR VY N G+ GGV
Sbjct: 177 TLLKSMDEKCILSLNGSRVTDEMLNLVPNVKAFHSALRCIKYWAKRRCVYGNPYGYFGGV 236
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
++L VARVCQLYPNA +V +FF +++ W+WP PV+L + + VWDP+
Sbjct: 237 AFSLCVARVCQLYPNASSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPS 296
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
DK H MP+ITPAYP M +++NVS ST V+ +F + I E N + +FE F
Sbjct: 297 DKYHRMPVITPAYPSMCATHNVSNSTQHVITMEFSRAHEILSNPEKN--DFRRIFELSDF 354
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP------HE 235
F Y+ +++V ++ + + W+G+VES++R L E L P+P E
Sbjct: 355 FSRYKLFVEVLAMSTSEEGFAKWEGYVESKIRILASKFEA-VDDILYAIPFPKAFRVGEE 413
Query: 236 YVDTSKPCAH-----CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 290
+ +P A AFF+ + P +G++ + V+EF I Y + M
Sbjct: 414 SIRKIRPGASEVKKCTAFFIAIDIIP----VKGKKVVVEQQVKEFMEFIKEYEGKESSMR 469
Query: 291 ICVSHIRRKQIPPYV 305
I V+ +++K I ++
Sbjct: 470 IEVNSLKKKDIQGFL 484
>gi|429852211|gb|ELA27357.1| poly polymerase [Colletotrichum gloeosporioides Nara gc5]
Length = 632
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 166/296 (56%), Gaps = 4/296 (1%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +RSLNG RV D+IL LVP F LR +K WA+RR +Y+N+ GF GGV
Sbjct: 186 LLRGLDEAELRSLNGTRVTDEILSLVPEEATFKLALRAIKLWAQRRAIYANIMGFPGGVA 245
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S++V++FF + W WP PV+L ++ L VW+P+ + D
Sbjct: 246 WAMLVARVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKNVEGGPLQVRVWNPKVYKGD 305
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MP+ITPAYP M ++YN++ S + V+ + G I + + + K WS LF + FF
Sbjct: 306 QFHLMPVITPAYPSMCATYNITRSAMTVIQQELTRGCEITDNIMVGKNPWSDLFVKHTFF 365
Query: 183 -ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
+ Y+ Y+ V + + + W G+VES++R L +E+ L H + Y +
Sbjct: 366 TQGYKYYISVITASTDKEAHKIWSGYVESKVRVLVQGLEQHQSIAL-AHAFNKGY-ERRH 423
Query: 242 PCAHCAFFMGLQRKP-GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHI 296
C +Q +V++ Q D G+++E KL + PG++ +I
Sbjct: 424 RCTSDEEVQQIQAGSLNFLVKDSQATDDAGALKEEKLETKAELNGIPGLKTETDNI 479
>gi|327262763|ref|XP_003216193.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
[Anolis carolinensis]
Length = 678
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 186/343 (54%), Gaps = 16/343 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF--LG 59
S L +D +RSLNG RV D+IL LVPN E+F TLR +K WAKR+ + + + + L
Sbjct: 147 SSLKSLDIRCIRSLNGFRVTDEILHLVPNKENFRLTLRAIKLWAKRKYLINLILCYQPLC 206
Query: 60 GVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKN 119
++WA+L C++Y N S V+R + ++ WPNPV+L +E+ L VWDPR N
Sbjct: 207 LISWAVLSXITCKIYQNGRGSFSVNRCYSSFSFREWPNPVLLKEPEESNLNLPVWDPRVN 266
Query: 120 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 179
D+ H MPIITPAYP NS+YNVSTST +M+++F++G + +E+ K+ W L EP
Sbjct: 267 PSDRYHLMPIITPAYPQQNSTYNVSTSTRAIMVEEFKHGLVVADEIFQGKSDWPKLLEPP 326
Query: 180 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERD---TYGKLQCHPYPHEY 236
FF+ Y++Y+ + ++ + L W G VES++R L +ER+ T + +P
Sbjct: 327 NFFQKYKHYIVLTASSSTEEHHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNR 386
Query: 237 VDTSKPCAHCAFFMGLQRKP---GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 293
+ +F+G+ K E V +DI+ + N K GM+I
Sbjct: 387 TQPKESDYVSLWFLGIIFKKAENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEA 446
Query: 294 SHIRRKQIPPYVFPEGYKRT--------RHPRLASQQRSSENG 328
+H+++KQ+ Y+ + ++ RH RL ++ S +N
Sbjct: 447 THVKKKQLHYYLPADLLQKRKKSMPDVGRHTRLVLKRTSLDNS 489
>gi|170059284|ref|XP_001865296.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
gi|167878124|gb|EDS41507.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
Length = 328
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 138/219 (63%), Gaps = 10/219 (4%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D VRSLN CR D+IL+LVPN+++F LR K WAK+ G+YSN G+ GGV+
Sbjct: 102 LLKNLDPKLVRSLNRCRATDEILRLVPNIDNFRLALRSTKLWAKKHGIYSNSLGYFGGVS 161
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQL PN V + V +FF V++ W+W +PV L D LGF VWDPR N +
Sbjct: 162 WAMLVARTCQL-PNVVAATQVHKFFLVFSRWKWSHPVFLKRPDTVNLGFQVWDPRVNVQG 220
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP ST +VM+++F G I +E+ L KA W LFE FF
Sbjct: 221 RFHLMPIITPAYP---------HSTRKVMLNEFSRGMQITDEIMLGKAGWDKLFEAPSFF 271
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 221
YR + + + + N DDLL W VES++R L +ER
Sbjct: 272 FKYRYIIVLLVTSNNTDDLLEWCELVESKIRYLIQNLER 310
>gi|156037648|ref|XP_001586551.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980]
gi|154697946|gb|EDN97684.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 573
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 141/232 (60%), Gaps = 2/232 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +D+ +RS+NG RV D I+ LVP F LR +K WA+RR +Y+N+ GF GGV
Sbjct: 181 NLLTGLDDAGLRSVNGTRVTDDIMDLVPEKAVFRNALRGVKLWAQRRAIYANIMGFPGGV 240
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVARVCQLYP A S ++ +FFR+ W+WP PV+L I +L VW+PR +
Sbjct: 241 AWAMLVARVCQLYPQATASTIILKFFRIMEKWQWPQPVLLQQIKNGKLNVRVWNPRVYKS 300
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D H MPIITP+YP M +++NV+ ST ++ + G I + + + KA W LF+ + F
Sbjct: 301 DSFHLMPIITPSYPSMCATHNVTKSTKEIICRELARGGNIVDRIMMGKAPWKDLFQKHTF 360
Query: 182 F-ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F ++Y+ YL V + + L W G VES++R L +E L HP+
Sbjct: 361 FTKNYKYYLSVISASTTKEAQLIWAGLVESKVRLLVTNLETHESIAL-AHPF 411
>gi|302499084|ref|XP_003011538.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
gi|291175090|gb|EFE30898.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
Length = 700
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 152/254 (59%), Gaps = 21/254 (8%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +R +NG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV
Sbjct: 188 LLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 247
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR- 121
WA+LVARVCQLYP A S++V +FFR+ W WP PV+L I++ L VW+P+ +
Sbjct: 248 WAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKVGSQL 307
Query: 122 ------------------DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICE 163
D+ H MPIITPAYP M +++NVS ST V++ + + G + +
Sbjct: 308 CFFIPKALTDFSFQIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVD 367
Query: 164 EVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERD 222
++ + + +WS LF + FF + Y+ YL ++ + + + W G VES+LR L ++R
Sbjct: 368 KIFVGQRRWSDLFARHSFFSADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRK 427
Query: 223 TYGKLQCHPYPHEY 236
+ ++ HP+P +
Sbjct: 428 SSIEI-AHPFPKGF 440
>gi|302665415|ref|XP_003024318.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
gi|291188368|gb|EFE43707.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
Length = 599
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/255 (38%), Positives = 152/255 (59%), Gaps = 22/255 (8%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +R +NG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV
Sbjct: 188 LLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 247
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR- 121
WA+LVARVCQLYP A S++V +FFR+ W WP PV+L I++ L VW+P+ +
Sbjct: 248 WAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKVGSQL 307
Query: 122 -------------------DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTIC 162
D+ H MPIITPAYP M +++NVS ST V++ + + G +
Sbjct: 308 CFFFIPRALADFSFQIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMV 367
Query: 163 EEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 221
+++ + + +WS LF + FF + Y+ YL ++ + + + W G VES+LR L ++R
Sbjct: 368 DKIFVGQRRWSDLFARHSFFSADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDR 427
Query: 222 DTYGKLQCHPYPHEY 236
+ ++ HP+P +
Sbjct: 428 KSSIEI-AHPFPKGF 441
>gi|402077328|gb|EJT72677.1| Poly(A) polymerase pla1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 633
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/266 (38%), Positives = 152/266 (57%), Gaps = 20/266 (7%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE +RS+NG RV D+IL LVP F T LR +K WA+RR +Y N+ GF GGV
Sbjct: 182 NLLRGLDEKELRSVNGTRVTDEILSLVPEQNIFRTALRAIKLWAQRRAIYGNIMGFPGGV 241
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVARVCQLYP A S++V++FF + W WP PV+L I + L VW+PR +
Sbjct: 242 AWAMLVARVCQLYPKATSSVIVNKFFSILLQWPWPQPVLLKPIGDGPLQVRVWNPRVYKG 301
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D H MP+ITPAYP M +++NV+ S++ V+ + Q I + + W +F + F
Sbjct: 302 DSYHLMPVITPAYPSMCATFNVTRSSMTVIKRELQLAAEITNNIMCSTKPWKDMFAKHTF 361
Query: 182 F-ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
F + ++ Y+QV + + + W G+VES++R L +ER HE + +
Sbjct: 362 FTKDFKYYMQVISASRDKEAHKIWSGFVESKVRMLVQSLER------------HESIAVA 409
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQF 266
+P F G +R + G+QF
Sbjct: 410 RP-----FIKGFER--FHRYRNGEQF 428
>gi|398390670|ref|XP_003848795.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
IPO323]
gi|339468671|gb|EGP83771.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
IPO323]
Length = 559
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 137/221 (61%), Gaps = 1/221 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L + E +R +NG RV D+IL+LVP F LR +K WA+RR +Y NV GF GGV
Sbjct: 180 NLLRGLTEVDLRCVNGTRVTDRILQLVPQTRVFRVALRAVKLWAQRRAIYGNVVGFPGGV 239
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+A++VAR+CQLYP A M+V +FF V + W+WP + L ++ L WDP NR
Sbjct: 240 AYAMMVARICQLYPRAAAPMIVQKFFFVISNWQWPRAITLQTREKGPLAEKEWDPTLNRW 299
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
DK H MP+ITPAYPCMNS+ ++ ST V++ + + G+ I EE+ K QW LF F
Sbjct: 300 DKMHLMPVITPAYPCMNSTMSIMPSTKAVLLTELKRGHDIMEEIYGGKKQWKDLFVKQKF 359
Query: 182 F-ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 221
F E+Y++Y+ V + AW G V+SRLR+L IE+
Sbjct: 360 FSEAYQHYICVITAGKTKEAQQAWSGLVQSRLRRLIQGIEQ 400
>gi|324975490|gb|ADY62673.1| PAPa [Candida orthopsilosis]
Length = 372
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 131/190 (68%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE +R+LNG RV D+IL+LVP F LR +K WA++R VY+NV GF GGV
Sbjct: 174 NLLKNIDEKDMRALNGTRVTDEILRLVPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGV 233
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVAR+CQLYPNAV ++++ +FF++Y+ W WP PV+L I++ L VW+PR
Sbjct: 234 AWAMLVARICQLYPNAVSAVILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAM 293
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N++ ST +++M++F G I E+ + WS L E + F
Sbjct: 294 DRQHRMPVITPAYPSMCATHNITNSTQKIIMNEFNRGVEIIGEIFTGQKVWSHLLERHSF 353
Query: 182 FESYRNYLQV 191
F Y+ YL V
Sbjct: 354 FHQYKFYLCV 363
>gi|189208746|ref|XP_001940706.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187976799|gb|EDU43425.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 579
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 173/347 (49%), Gaps = 41/347 (11%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L + E RS+NG RV +++L VP F LR +K W+ RRG+Y V G+ GGV W
Sbjct: 185 LEGLSESATRSVNGTRVTNELLDSVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAW 244
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A++VAR+CQLYP A + +VS+FF + W WP PVML I+E ++G VW+P+ D+
Sbjct: 245 AIMVARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYGGDR 304
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF- 182
H MPIITPA+P M +++ V STLR+M ++F ++I +++ NK W ALFE + FF
Sbjct: 305 AHLMPIITPAFPSMCATHTVMPSTLRIMKEEFGRADSILQDIFANKKDWKALFERHTFFT 364
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY------PHEY 236
+ ++ YL V + + + G V+S++R + I+ G PY H
Sbjct: 365 KDHKYYLSVVAASRTKEANSTFSGLVQSKIRHIIKGIDDGNTGIATARPYIEYFERAHRI 424
Query: 237 VDTS-KPCAH-----------------------------CAFFMGLQRKPGEVVQEGQQF 266
D K A F++GL GE +
Sbjct: 425 TDDQFKEVAQGSLDYLIPKSEADAEGTLEANGDTTIVHTTTFYIGLTLPTGEAT---KSL 481
Query: 267 DIRGSVEEFKLSI-NMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKR 312
DI V +FK I + ++ + M + V H R +P VF EG R
Sbjct: 482 DISYPVSQFKSYITDSDLYNEDLMSVKVVHTRSSALPDDVFVEGETR 528
>gi|429961574|gb|ELA41119.1| hypothetical protein VICG_01818 [Vittaforma corneae ATCC 50505]
Length = 501
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 151/245 (61%), Gaps = 13/245 (5%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE + SLNG RV D IL+L+P V+ F + LR +KFWAKRR +Y N G+ GGV
Sbjct: 171 TILRSMDEKCILSLNGSRVTDAILRLIPRVDVFHSALRAIKFWAKRRYIYGNAYGYFGGV 230
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+++ VAR+CQ+YPN +V +FF Y+ W+WP PV LC+I + VWDP+
Sbjct: 231 TFSICVARICQMYPNLCAYDIVCKFFETYSSWKWPTPVQLCSIVDHNYNLKVWDPKVYPA 290
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
DK H MP+ITP YP +NS++NV+ ST ++ + GN E+ +KA +S LFE F
Sbjct: 291 DKYHKMPVITPVYPSINSTHNVTQSTFILICSELARGN----ELMRSKAPFSKLFEVSGF 346
Query: 182 FESYRNYLQVDIVAANADDLLA---WKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 238
F+ ++ +++V I N++DL A W+G+++S++R L +E L P+P +
Sbjct: 347 FKKHKMFIEVRI---NSEDLQAFNIWEGYIQSKIRILCTKLENLENISLAA-PFPKAF-- 400
Query: 239 TSKPC 243
T + C
Sbjct: 401 TGRSC 405
>gi|226479000|emb|CAX72995.1| poly (A) polymerase beta [Schistosoma japonicum]
Length = 704
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/391 (33%), Positives = 189/391 (48%), Gaps = 24/391 (6%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
++ ++DE VRS+NG RV + IL LV N F L+ ++ WAKRR VYSN GFLGGV+
Sbjct: 183 LMRNMDERDVRSINGVRVTEDILNLVYNKNSFKVALKVIRIWAKRRNVYSNALGFLGGVS 242
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-AELGFSVWDPRKNRR 121
WA+LV+R+CQLYP A PSM+V FF +++ W WP PV L + A L VWDPR N
Sbjct: 243 WAILVSRICQLYPYATPSMIVYLFFTIFSQWPWPKPVRLRESEYIASLCLPVWDPRLNPS 302
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPI+TP+YP NS+YNV S ++ + + G + ++K WS LFE F
Sbjct: 303 DQYHLMPILTPSYPSQNSTYNVQRSNRIIIERELKQGLNVVRASMMHKRSWSNLFEAAFF 362
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL---QCHPYPHEYVD 238
F+ YR+Y+ V +V + G VESRLR L E + Y K+ C Y D
Sbjct: 363 FQ-YRHYVVVIVVGNVKHTFIELCGLVESRLRVLVSNFEVNRYVKMAHINCRAYGKGPND 421
Query: 239 TSKPCAHCAFF-MGLQRKPGEVVQEGQQFDIRGSVEEFK--LSINMYMFWKP-------- 287
F M R + + G LS N+ F K
Sbjct: 422 DDANFVRKWFIGMEFDRNTNSLTSTVHNSNTAGEKPTLNVDLSENISSFEKSIERGLSSE 481
Query: 288 GMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTG-------SGLKRK 340
+ + V ++++ Q+ ++ E + A+ + N E G + L
Sbjct: 482 DLSVTVKYVKKSQLAQFISAEDMDEIKRQAAAAALSNVNNSTENLKGVRQLPSNNALSTM 541
Query: 341 KDP-ESVDQDGPEKRQSISPQKQDSLSPDHL 370
P S++ E+ S S + Q+S+S L
Sbjct: 542 SSPASSIELSTSEEASSPSNRLQNSVSTSSL 572
>gi|171686334|ref|XP_001908108.1| hypothetical protein [Podospora anserina S mat+]
gi|170943128|emb|CAP68781.1| unnamed protein product [Podospora anserina S mat+]
Length = 661
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 139/223 (62%), Gaps = 5/223 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L + E VRSLNG RV D+IL LVP F LR +K WA+R+ +Y+N+ GF GGV
Sbjct: 179 TLLRGLSENEVRSLNGTRVTDEILNLVPEPATFKLALRAIKLWAQRKAIYANIMGFPGGV 238
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFS---VWDPRK 118
WA+LVARVCQLYP A +++V++FF + W WP PV+L I E + + VW+P+
Sbjct: 239 AWAMLVARVCQLYPKATSAVVVNKFFHIMLKWPWPLPVLLKDI-EYNISVTRAPVWNPKL 297
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP 178
D+ H MPIITPAYP M +++N++ S+ V+M + + G + EE+ +A W ALF
Sbjct: 298 YSSDRNHRMPIITPAYPAMCATHNINRSSKVVIMQELEKGVQVTEEIMTGRAPWKALFTK 357
Query: 179 YLFFES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE 220
+ FF S +R YL V + D W G++ESR+R L IE
Sbjct: 358 HTFFTSDFRYYLTVISSSRTKDAQNVWSGFIESRVRVLVNKIE 400
>gi|325191928|emb|CCA26398.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 664
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 172/318 (54%), Gaps = 14/318 (4%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L+ +D ++RS++ RV+ +L+LVP F + +R ++ WAKRRG+YSN TGFLGG++
Sbjct: 318 ILSGMDSISIRSMSIARVSSLVLELVPKGCAFRSFVRIIRLWAKRRGIYSNKTGFLGGIS 377
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLC--AIDEAELGFSVWDPRKNR 120
W LL +CQ+ P A S+L+ RFF V++ W WP PV + + AE W P+ N
Sbjct: 378 WTLLAVFICQMLPEASLSVLLHRFFLVFSKWTWPTPVWIARPYLGNAEADGVQWCPQTNH 437
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKA--QWSALFEP 178
D+ H MPIITP YP +NS+ NV+ +TLR+M ++FQ G I EE+ A W LF P
Sbjct: 438 HDRAHLMPIITPGYPSVNSAVNVNRATLRIMQEEFQRGRYIVEEITEKYAFGNWQNLFTP 497
Query: 179 YLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 238
F Y NYL + + A N +DL W ++ SRLR+L +E + HPYP
Sbjct: 498 SEFLVRYDNYLVMRVQALNEEDLDQWSNYIASRLRKLVESLEVAIPIR-SVHPYPVLMPG 556
Query: 239 TSKPCAHCA--FFMGLQ---RKPG----EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM 289
T P + + + +G + RK G + +E + + ++ KPGM
Sbjct: 557 TQDPGVNASGYYLLGFEVENRKRGCKSNTLCEEAKACTVSAMRYFIATEVDQCTERKPGM 616
Query: 290 EICVSHIRRKQIPPYVFP 307
+I + + +P V P
Sbjct: 617 KIDLQYANWNALPLCVLP 634
>gi|303388385|ref|XP_003072427.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
50506]
gi|303301567|gb|ADM11067.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
50506]
Length = 505
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 173/317 (54%), Gaps = 22/317 (6%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE + SLNG RV D++L LVPNV F + LRC+K+WAKRR VY N G+ GGV
Sbjct: 177 TLLKSMDEKCILSLNGSRVTDEMLNLVPNVNTFHSALRCIKYWAKRRCVYGNPYGYFGGV 236
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
++L VARVCQLYPNA +V +FF +++ W+WP PV+L + + VWDP+
Sbjct: 237 AFSLCVARVCQLYPNASSFSIVCKFFELFSSWKWPTPVVLRPVVDLNYNLKVWDPKVYPS 296
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
DK H MP+ITPAYP M +++NVS ST V+ +F + I E N + +F+ F
Sbjct: 297 DKYHRMPVITPAYPSMCATHNVSNSTQHVISMEFARAHEILSSPEKN--DFRKIFDLSDF 354
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY----- 236
F Y+ + ++ ++ + W+G+VES++R L E L P+P +
Sbjct: 355 FSRYKLFAEILAMSTEEEGFPKWEGYVESKVRILASKFEA-VDDILYAIPFPKAFRVAEE 413
Query: 237 --------VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG 288
+ K C AFF+ + P +G++ + V+EF +N Y +
Sbjct: 414 NIGKIKYGMQDLKKCT--AFFIAIDVIP----VKGKKVVVEQQVKEFVDFMNEYEGKERS 467
Query: 289 MEICVSHIRRKQIPPYV 305
M I ++ +++K + ++
Sbjct: 468 MRIEINSLKKKDVQNFL 484
>gi|449296009|gb|EMC92029.1| hypothetical protein BAUCODRAFT_78629 [Baudoinia compniacensis UAMH
10762]
Length = 594
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/220 (42%), Positives = 133/220 (60%), Gaps = 1/220 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +D+ VR +NG RV ++IL+LVP + F LR +K WA+RR +Y N+ G+ GGV
Sbjct: 178 NLLRGLDDTDVRCVNGTRVTNRILQLVPQTKTFRYALRAIKLWAQRRAIYGNIVGYPGGV 237
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVARVCQLYP AV ++V RFF + W WP PV L E+ L WDP +R
Sbjct: 238 AWAILVARVCQLYPKAVAPLIVQRFFFIVKRWNWPKPVFLQHKVESSLVIREWDPNTSRH 297
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D H MPI+TPA P N+++ V ST VMM + + G I ++ W ALFE + F
Sbjct: 298 DAGHLMPILTPAVPSTNTAHTVGPSTKMVMMRELERGEQIIADIYSKSKPWKALFERHNF 357
Query: 182 FES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE 220
F + Y++Y+ V + + D AW G V+S+++ L IE
Sbjct: 358 FTTAYKHYICVVTASKSKDAQDAWAGLVQSKIKWLVQGIE 397
>gi|170054796|ref|XP_001863293.1| Poly(A) polymerase beta [Culex quinquefasciatus]
gi|167874980|gb|EDS38363.1| Poly(A) polymerase beta [Culex quinquefasciatus]
Length = 375
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 165/325 (50%), Gaps = 67/325 (20%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D +RSLNGCR D+IL+LVPN+++F LR K WAK+ G+YS G+ GGV+
Sbjct: 112 LLKNLDPKLMRSLNGCRATDEILRLVPNIDNFRLALRSTKLWAKKHGIYSTSLGYFGGVS 171
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQL PN VP V L D LGF VWDPR N +
Sbjct: 172 WAMLVARTCQL-PNVVP-------------------VFLKRPDTVNLGFQVWDPRVNVQG 211
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ MPIITPAYP NS+++VS+ST ++M+++F G I +E+ L KA W LFE FF
Sbjct: 212 RFDLMPIITPAYPQQNSTFHVSSSTRKIMLNEFNRGMQITDEIMLGKAGWDKLFEAPSFF 271
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 242
YR ++ + + + N DDLL W G VES++R L +ER + L
Sbjct: 272 FKYRYFIVLLVTSNNTDDLLEWCGLVESKIRYLIQNLERILHINL--------------- 316
Query: 243 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 302
AH K E ++G + + R H+RRKQ+
Sbjct: 317 -AHVHI------KVLETTRDGMKTEAR-------------------------HVRRKQLN 344
Query: 303 PYVFPEGYKRTRHPRLASQQRSSEN 327
Y+ P KR R + ++R N
Sbjct: 345 QYLDPNLLKRERKNQRLLRRRKCAN 369
>gi|330915746|ref|XP_003297151.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
gi|311330327|gb|EFQ94750.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
Length = 566
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 172/347 (49%), Gaps = 41/347 (11%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L + E RS+NG RV +++L VP F LR +K W+ RRG+Y V G+ GGV W
Sbjct: 185 LEGLSESATRSVNGTRVTNELLDSVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAW 244
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A++VAR+CQLYP A + +VS+FF + W WP PVML I+E ++G VW+P+ D+
Sbjct: 245 AIMVARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYGGDR 304
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF- 182
H MPIITPA+P M +++ V STLR+M ++F + I +++ NK W ALFE + FF
Sbjct: 305 AHLMPIITPAFPSMCATHTVMPSTLRIMKEEFGRADKILQDIFANKKDWKALFERHTFFT 364
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY------PHEY 236
+ ++ YL V + + + G V+S++R + I+ G PY H
Sbjct: 365 KDHKYYLSVVAASRTKEANSTFSGLVQSKIRHIIKGIDDGNTGIATARPYIEYFERAHRI 424
Query: 237 VDTS-KPCAHCAF-----------------------------FMGLQRKPGEVVQEGQQF 266
D K A + ++GL GE +
Sbjct: 425 TDDQFKEVAQGSLDYHIPKSEMDAEGALEANGDTTVVYTTTFYIGLTLPTGEAT---KSL 481
Query: 267 DIRGSVEEFKLSI-NMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKR 312
DI V +FK I + +F + M + V H R +P VF EG R
Sbjct: 482 DISYPVSQFKSYITDSDLFNEDLMSVKVVHTRSSALPDDVFVEGETR 528
>gi|340959697|gb|EGS20878.1| poly(A) polymerase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 675
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 139/233 (59%), Gaps = 11/233 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L + E VRSLNG RV D+IL LVP F LR +K WA+R+ +Y+N+ GF GGV
Sbjct: 182 NLLRGLSENEVRSLNGTRVTDEILNLVPEPATFKLALRAIKLWAQRKAIYANIMGFPGGV 241
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA--ELGFSVWDPRKN 119
WA+LVARVCQLYP A +++V++FF + W WP PV+L I+ +VW+P+
Sbjct: 242 AWAMLVARVCQLYPKATSAVIVNKFFHIMVKWPWPLPVLLKDIEYGCPVTRVAVWNPKLY 301
Query: 120 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 179
D+ H MPIITPAYP M +++NV ST+ V+ + + G I +E+ + + W LF +
Sbjct: 302 ASDRNHKMPIITPAYPSMCATHNVGNSTMAVIQQELEKGAQITDEIMVGRRPWKDLFTKH 361
Query: 180 LFFES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP 231
FF + ++ YL V + AW G++ESR+R L KL+ HP
Sbjct: 362 TFFTNGFKYYLTVISSSRTKQAQNAWSGFIESRVRLLV--------NKLEMHP 406
>gi|167536365|ref|XP_001749854.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771569|gb|EDQ85233.1| predicted protein [Monosiga brevicollis MX1]
Length = 604
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 196/375 (52%), Gaps = 62/375 (16%)
Query: 4 LNDVD-------EPTVRSLNGCRVADQILKLVP-NVEHFCTTLRCLKFWAKR-------- 47
L DVD + +RS+NGCRVAD +L+++P N++ F T LR +K WAK
Sbjct: 166 LQDVDLLKKIHEDEIMRSINGCRVADAVLEVMPSNLQTFRTALRAVKLWAKHNLTRSNQT 225
Query: 48 -----RGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMW--------- 93
RGVYSNV G+ GG++ +LV R+CQLYPNA S ++ +FFRVY+ W
Sbjct: 226 VRTSGRGVYSNVHGYFGGIHLVILVTRICQLYPNAAASTILCKFFRVYSDWYGSNWIKHA 285
Query: 94 --------RWPN-PVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVS 144
W N P+ + +D+ LG WDPR N RD+ MPIITP YP N+++NV+
Sbjct: 286 REIWLAHGEWMNSPIKIKDVDDLHLGKRQWDPRSNPRDRYDLMPIITPVYPQQNAAFNVN 345
Query: 145 TSTLRVMMDQFQYGNTICEEVELNKAQ--WSALFEPYLFFESYRNYLQVDIVAANADDLL 202
STL ++ +F G+ +C+++ + WSA++EP FF+ Y+ +++V AA D
Sbjct: 346 ESTLHRIVTEFSRGHRVCQDIMRASSNVPWSAVWEPIRFFDEYQYFVRVVASAATESDRT 405
Query: 203 AWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD-----------TSKPCAHCAFFMG 251
++G VES +R L L ++ T YP Y + T+ P A+++
Sbjct: 406 EFEGLVESTVRHLVLNLQY-TDNVAYAMAYPKAYHEDPVADKDGTEATTGPW-RTAWYLA 463
Query: 252 LQ---RKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQIPP 303
L+ ++ G + + D++G + F ++ M + + M + V +++ ++P
Sbjct: 464 LEFGIKQEGRIEPAPSKLDLQGPLVAFYGRLRDRTVTMSRYDETTMNVDVQAMKQSKLPG 523
Query: 304 YVFPEGYKRTRHPRL 318
Y++P G R RL
Sbjct: 524 YLYPGGVNPHRKVRL 538
>gi|453087599|gb|EMF15640.1| Poly(A) polymerase [Mycosphaerella populorum SO2202]
Length = 607
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 134/213 (62%), Gaps = 2/213 (0%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L + E ++ +NG RV D+IL LVP F LR +K WA++RG+Y NV G+ GGV
Sbjct: 181 LLRGLSETDLKCVNGTRVTDRILSLVPQTRTFRIALRAVKMWAQKRGLYGNVYGYPGGVA 240
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA-ELGFSVWDPRKNRR 121
+A++VARVCQLYP A S +V++FF V W+WP+P+ L A ++ L WDP+KN R
Sbjct: 241 YAMMVARVCQLYPRAAASTIVAKFFWVVKNWQWPSPIYLQAREKGPSLNQQEWDPQKNFR 300
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
DK H MP+ITPAYP MN+++ ++ ST V++ + G+ I ++ K QW L + F
Sbjct: 301 DKRHLMPVITPAYPVMNATHTITRSTKEVLIRELNRGHEIMADIYSGKKQWRDLLIKHEF 360
Query: 182 FES-YRNYLQVDIVAANADDLLAWKGWVESRLR 213
F S Y++Y+ + + DD AW G V SRLR
Sbjct: 361 FTSAYQHYIVIVTASKTKDDQQAWAGLVTSRLR 393
>gi|389639278|ref|XP_003717272.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
gi|351643091|gb|EHA50953.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
Length = 616
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 139/221 (62%), Gaps = 1/221 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE +RS+NG RV D+I+ LVP F T LR +K WA+RR +Y N+ GF GGV
Sbjct: 182 NLLRGLDEKELRSVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGV 241
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVARVCQLYP A S++V++FF + W WP PV+L AI++ L +W+P+
Sbjct: 242 AWAMLVARVCQLYPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPG 301
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP M +++N++ S+ V+ + + + + K W LF+ + F
Sbjct: 302 DRYHLMPIITPAYPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGKLPWKDLFQKHTF 361
Query: 182 F-ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 221
F + ++ Y+QV + + + W G+VES++R L +ER
Sbjct: 362 FTKDFKYYIQVIAASKDKESHKLWSGFVESKVRLLVQGLER 402
>gi|340500382|gb|EGR27268.1| nuclear poly polymerase npap nucleotidyltransferase protein
binding, putative [Ichthyophthirius multifiliis]
Length = 512
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 166/288 (57%), Gaps = 25/288 (8%)
Query: 1 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
+ +L +DE ++R+LNG RVA+ + + N + F L+C+K WA+ R +YSN+ G+L G
Sbjct: 186 IQILQGMDEKSIRALNGYRVAEWFNQNIKNKDTFKKALKCIKLWAQNRCIYSNILGYLNG 245
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN-PVMLCAIDEAELGFSV----WD 115
+ W++LVA++CQLYPN ++ RFF +Y+ W+W + V + I E + W
Sbjct: 246 IAWSILVAKICQLYPNYFVYGIIERFFFLYSRWKWHDMAVQIEYIQEDIYNQMICGNQWV 305
Query: 116 PRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSA- 174
P +M IITP +PC+N +YNV+ STLRV+ +QFQYG I +E++ N++ +
Sbjct: 306 P---ENKGISNMMIITPCFPCINCAYNVTESTLRVIQEQFQYGYRILDEIQKNQSHYDYQ 362
Query: 175 -LFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGK-LQCHPY 232
LF+P+ FF+ Y +LQ+ I+A N ++ WKG VE LR+LT +IE K + HP+
Sbjct: 363 DLFKPFEFFKRYNAFLQIRILAKNKNEYFQWKGHVEINLRKLTKIIENGKLSKIILIHPF 422
Query: 233 PHEYVDTSKP------CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEE 274
+++D C +F G++ K Q DI+ S EE
Sbjct: 423 S-KFIDLCLKEQLGDYSLGCVYFYGIKVKDN-------QNDIQISFEE 462
>gi|440468857|gb|ELQ37991.1| Poly(A) polymerase pla1 [Magnaporthe oryzae Y34]
Length = 611
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 139/221 (62%), Gaps = 1/221 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE +RS+NG RV D+I+ LVP F T LR +K WA+RR +Y N+ GF GGV
Sbjct: 182 NLLRGLDEKELRSVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGV 241
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVARVCQLYP A S++V++FF + W WP PV+L AI++ L +W+P+
Sbjct: 242 AWAMLVARVCQLYPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPG 301
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP M +++N++ S+ V+ + + + + K W LF+ + F
Sbjct: 302 DRYHLMPIITPAYPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGKLPWKDLFQKHTF 361
Query: 182 F-ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 221
F + ++ Y+QV + + + W G+VES++R L +ER
Sbjct: 362 FTKDFKYYIQVIAASKDKESHKLWSGFVESKVRLLVQGLER 402
>gi|164423119|ref|XP_959011.2| Poly(A) polymerase [Neurospora crassa OR74A]
gi|157069956|gb|EAA29775.2| Poly(A) polymerase [Neurospora crassa OR74A]
Length = 632
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 141/233 (60%), Gaps = 11/233 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L + E VRSLNG RV D+IL LVP + F LR +K WA+RR +Y+N+ G+ GGV
Sbjct: 183 NLLRGLSENEVRSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGV 242
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAID--EAELGFSVWDPRKN 119
WA+LVARVCQLYP A +++V +FF + W WP PV+L I+ ++ +VW+P+
Sbjct: 243 AWAMLVARVCQLYPKATSAVIVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIY 302
Query: 120 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 179
D+ H MPIITP+YP M +++NV S++ V+ + + G I EE+ L K W LFE +
Sbjct: 303 PSDRNHKMPIITPSYPSMCATHNVGRSSMAVIQQELERGVQISEEIMLGKRPWKDLFEKH 362
Query: 180 LFFES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP 231
FF + ++ YL V + W G+VESR+R L KL+ HP
Sbjct: 363 TFFTNGFKFYLTVISSGRTKEAQNTWSGFVESRVRVLV--------QKLELHP 407
>gi|336470057|gb|EGO58219.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2508]
gi|350290251|gb|EGZ71465.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2509]
Length = 632
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 141/233 (60%), Gaps = 11/233 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L + E VRSLNG RV D+IL LVP + F LR +K WA+RR +Y+N+ G+ GGV
Sbjct: 183 NLLRGLSENEVRSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGV 242
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAID--EAELGFSVWDPRKN 119
WA+LVARVCQLYP A +++V +FF + W WP PV+L I+ ++ +VW+P+
Sbjct: 243 AWAMLVARVCQLYPKATSAVIVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIY 302
Query: 120 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 179
D+ H MPIITP+YP M +++NV S++ V+ + + G I EE+ L K W LFE +
Sbjct: 303 PSDRNHKMPIITPSYPSMCATHNVGRSSMAVIQQELERGVQISEEIMLGKRPWKDLFEKH 362
Query: 180 LFFES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP 231
FF + ++ YL V + W G+VESR+R L KL+ HP
Sbjct: 363 TFFTNGFKFYLTVISSGRTKEAQNTWSGFVESRVRVLV--------QKLELHP 407
>gi|119186325|ref|XP_001243769.1| hypothetical protein CIMG_03210 [Coccidioides immitis RS]
Length = 587
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 179/377 (47%), Gaps = 76/377 (20%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +R +NG RV D+IL+LVP + F LR +K WA+ GV
Sbjct: 181 LLRGLDEREIRCVNGTRVTDEILELVPEKKTFRLALRAIKLWAQ------------SGVA 228
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVARVCQLYP A S++V +FFR+ W WP PV+L I++ L VW+P+ D
Sbjct: 229 WAMLVARVCQLYPQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGD 288
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP M +++NVS ST V++ + + G I E++ L + +WS LF + FF
Sbjct: 289 RFHLMPIITPAYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFF 348
Query: 183 -ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY----- 236
+ Y+ YL + + + + W G VE++LR L + +++ + HP+P +
Sbjct: 349 SKDYKYYLNITASSTSKEAQSVWSGLVEAKLRHLVIALDKKASIDV-AHPFPKGFERVHS 407
Query: 237 --------------------------VDTSKPCAHCA----------------------- 247
D + AH A
Sbjct: 408 CKDEKEIEVAKSGLTRFQVKGTKTATTDETNDPAHVAALESANGSINMPGLGQTEDSNNH 467
Query: 248 ------FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQ 300
+++GL+ KP V + DI FK + ++PG+ ++ ++H+R
Sbjct: 468 TLHTTTYYIGLELKP-LVPGASRSLDISSETHMFKNMCTSWAQYQPGINDVTITHVRNYD 526
Query: 301 IPPYVFPEGYKRTRHPR 317
+P VF G R P+
Sbjct: 527 LPEDVFHPGETRPVRPK 543
>gi|452986896|gb|EME86652.1| hypothetical protein MYCFIDRAFT_49534 [Pseudocercospora fijiensis
CIRAD86]
Length = 612
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 193/412 (46%), Gaps = 63/412 (15%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +D+ ++ +NG RV D+IL LVP F LR +K WA++R VY + + GGV
Sbjct: 180 NLLRGLDDTDLKCVNGTRVTDRILTLVPQTRIFRIALRAVKLWAQKRAVYGAIACYPGGV 239
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+ ++VARVCQLYPNA +V +FF + W WP+P+ L A ++ LG + WDP N
Sbjct: 240 AYGMIVARVCQLYPNAAAPKIVQKFFWLLHTWAWPSPIYLQAREKGPLGKTEWDPTTNPG 299
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
DK H MP+ITPAYPCMNS++ ++ ST+ V+ + G I E+ K W LF + F
Sbjct: 300 DKRHLMPVITPAYPCMNSTHTITPSTMAVLKKESDRGEKIMNEIYEGKRPWKDLFAKHTF 359
Query: 182 F-ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER------------------- 221
F ++Y++Y+ + A D AW G V+SR+++L IE+
Sbjct: 360 FSDAYQHYICIITAARTKDAQQAWSGLVQSRVKRLLAGIEQSDADSVKLVQPFNKGIARR 419
Query: 222 ---------------------------DTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQR 254
D +++ HE D S A +++
Sbjct: 420 HECKSEADIEKTLAGGLECQVGESKTADQSAEVKAQVAAHEEDDGSTLANAAADGTTIEK 479
Query: 255 KPG-------------EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME-ICVSHIRRKQ 300
K E+++ + DI +++FK + + + M + + H+R Q
Sbjct: 480 KDNITEIWTTTFYLGIELIKGAKNLDISWPIQDFKRQVIDWDGYDSKMHSVQIKHVRDYQ 539
Query: 301 IPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ--TGSGLKRKKDPESVDQDG 350
+P +F EG KR + + ++ ++ + T +GL DP Q G
Sbjct: 540 LPDDLFTEGEKRPVKKKKPKKTDTAAENDKKRSFTNTGLDENLDPAKRRQSG 591
>gi|169598326|ref|XP_001792586.1| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
gi|160704377|gb|EAT90176.2| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
Length = 575
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/348 (33%), Positives = 171/348 (49%), Gaps = 42/348 (12%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL ++E T+RS+NG RV ++L VP HF LR +K WA RR +Y V G+ GG+
Sbjct: 181 SVLRHLEETTIRSVNGTRVVKELLSSVPQRRHFRYALRAVKLWANRRAIYGAVFGYPGGI 240
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA++VAR+CQLYP A + ++S+FF + W+WP PVML + E G VW+P
Sbjct: 241 AWAIMVARICQLYPMACGATILSKFFNLMHKWQWPRPVMLKEHELPEFGLRVWNPAHQSY 300
Query: 122 --DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 179
D H MP+ITPA+P M S++ V+TST ++MM++FQ + I +V + W ALF +
Sbjct: 301 PPDARHLMPVITPAFPAMCSTHTVTTSTKQIMMEEFQRADKIVRDVFNGQGTWEALFNNH 360
Query: 180 LFF-ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY-- 236
FF + ++ YL V + + L + G V+S++R L I+ G P+P +
Sbjct: 361 SFFTQDHKYYLSVIAASRTKEADLTFHGLVQSKVRLLVAGIDDGQTGIDMARPFPEGFER 420
Query: 237 -----------------VDTSKPCAHC--------------AFFMGLQRKPGEVVQEGQQ 265
+D P + F++GL R P +E
Sbjct: 421 VHRCKNEDEVEAVTKGSLDYMIPVSQVPAAGTTEDHIIYTMTFYIGL-RLP----KERST 475
Query: 266 FDIRGSVEEFKLSINMYMFWKPG-MEICVSHIRRKQIPPYVFPEGYKR 312
DI F+ I + G M + V H R +P +F G R
Sbjct: 476 LDISYITNHFRSKITESKLYDEGTMSVKVVHTRNTALPDDLFKPGEVR 523
>gi|440487552|gb|ELQ67335.1| Poly(A) polymerase pla1 [Magnaporthe oryzae P131]
Length = 484
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 139/221 (62%), Gaps = 1/221 (0%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE +RS+NG RV D+I+ LVP F T LR +K WA+RR +Y N+ GF GGV
Sbjct: 55 NLLRGLDEKELRSVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGV 114
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVARVCQLYP A S++V++FF + W WP PV+L AI++ L +W+P+
Sbjct: 115 AWAMLVARVCQLYPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPG 174
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP M +++N++ S+ V+ + + + + K W LF+ + F
Sbjct: 175 DRYHLMPIITPAYPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGKLPWKDLFQKHTF 234
Query: 182 F-ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 221
F + ++ Y+QV + + + W G+VES++R L +ER
Sbjct: 235 FTKDFKYYIQVIAASKDKESHKLWSGFVESKVRLLVQGLER 275
>gi|224143336|ref|XP_002336029.1| predicted protein [Populus trichocarpa]
gi|222838985|gb|EEE77336.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/253 (45%), Positives = 150/253 (59%), Gaps = 53/253 (20%)
Query: 160 TICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMI 219
T +E+ELNKAQWSALFEPYLFFE+Y+NYLQVDIVAA+A DLLAWKGWVESRLRQLT
Sbjct: 27 TTTKEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLT--- 83
Query: 220 ERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI 279
L+RK G QEGQQFDIR +V+EF+ I
Sbjct: 84 --------------------------------LKRKEGVTGQEGQQFDIRETVDEFRQDI 111
Query: 280 NMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ--RSSENGNEYQTGSG- 336
NMY+ WK GM+I VSH+RR+Q+P +VFP+GYKR+R R +QQ R+SE+ Q+GS
Sbjct: 112 NMYLPWKAGMDIYVSHVRRRQLPGFVFPDGYKRSRPSRHMNQQTNRTSEDVARSQSGSAE 171
Query: 337 --LKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLN 394
+KRK D E + + P S+SP A S + S+ E VI + +
Sbjct: 172 RHVKRKNDCEMAN---------LKP----SVSPSSSAGRSGVTSLASSCEGVILGRPTIG 218
Query: 395 QEIAEGGDVSNSS 407
++ DV+++S
Sbjct: 219 DIVSNCEDVASNS 231
>gi|397574427|gb|EJK49202.1| hypothetical protein THAOC_31949 [Thalassiosira oceanica]
Length = 843
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 179/349 (51%), Gaps = 34/349 (9%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEH----FCTTLRCLKFWAKRRGVYSNVTGFL 58
VL+ VD T +SLNG RV + I LV E F T +R ++ WAK RG+YSN G+
Sbjct: 210 VLSGVDAATEKSLNGPRVTNLIAALVGGTEQRYQTFLTVVRLVRKWAKNRGLYSNKMGYW 269
Query: 59 GGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRK 118
GGVN + VA V QLYPNA P+ + +FF V+ WRWPNPVML +AELG VW+ +
Sbjct: 270 GGVNINMAVALVLQLYPNACPASALRKFFLVFKSWRWPNPVMLTRPHDAELGLQVWNSHQ 329
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELN---------- 168
+ P+ITPAYP MNS+ +VS TL+++ ++F G+ I +++ +
Sbjct: 330 A-ANMRQVAPMITPAYPAMNSTLSVSRQTLQILHEEFCRGHGIVDKLYKDYQRGAIDPAD 388
Query: 169 ---KAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL-TLMIERDT- 223
W LFEP FF +Y YL + I D AW G+VESRLR+L + M+ R
Sbjct: 389 VESGGMWGELFEPSDFFIAYPYYLSLCITGPTLHDAQAWAGFVESRLRKLVSDMLGRSLP 448
Query: 224 YGKLQCHPYPHEY--VDTSKPCAHC------AFFMGLQRKPGEVVQEGQQFDIRGSVEEF 275
K+Q P + D + H +F+G + ++ G+Q DI + F
Sbjct: 449 LSKIQLWPKKFDVCCADKTALLTHAQRANSITYFIGF--RVDKLRMRGEQLDIERQLSNF 506
Query: 276 -KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQR 323
K + + PGM+I K++P F Y+ +LA+ +R
Sbjct: 507 RKFELGRFHPLVPGMDILPKSFGVKELPTICFDGTYEGG---KLAAMKR 552
>gi|336268304|ref|XP_003348917.1| hypothetical protein SMAC_01938 [Sordaria macrospora k-hell]
gi|380094176|emb|CCC08393.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 632
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 138/228 (60%), Gaps = 11/228 (4%)
Query: 7 VDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 66
+ E VRSLNG RV D+IL LVP + F LR +K WA+RR +Y+N+ G+ GGV WA+L
Sbjct: 188 LSENEVRSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGVAWAML 247
Query: 67 VARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAID--EAELGFSVWDPRKNRRDKT 124
VARVCQLYP A +++V +FF + W WP PV+L I+ ++ +VW+P+ D+
Sbjct: 248 VARVCQLYPKATSAVVVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDRN 307
Query: 125 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 184
H MPIITP+YP M +++NV S++ V+ + + G I EE+ L K W LFE + FF +
Sbjct: 308 HKMPIITPSYPSMCATHNVGRSSMAVIQQELERGVQIAEEIMLGKRPWKDLFEKHTFFTN 367
Query: 185 -YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP 231
++ YL V + W G+VESR+R L KL+ HP
Sbjct: 368 GFKFYLTVISSGRTKEAQNTWSGFVESRVRVLV--------QKLELHP 407
>gi|298710751|emb|CBJ32172.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 533
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 127/201 (63%), Gaps = 6/201 (2%)
Query: 28 VPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFF 87
VPN + F +RC++ WAK RG+YSN G+LGGVN+ ++VA CQ+YPNA PS L+ RFF
Sbjct: 195 VPNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFF 254
Query: 88 RVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTST 147
++ W WPN + L +AELG VW+ R N H MPIITPAYP MNSS NVS T
Sbjct: 255 KLMAGWNWPNAIQLVQPYDAELGLEVWNARAN---SWHCMPIITPAYPVMNSSANVSRFT 311
Query: 148 LRVMMDQFQYGNTICEEVELNKAQWSA---LFEPYLFFESYRNYLQVDIVAANADDLLAW 204
L VM +F G + + K SA LFEP FF Y +YL VD++A++ D+ AW
Sbjct: 312 LDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAW 371
Query: 205 KGWVESRLRQLTLMIERDTYG 225
GWVESRLR++T ++ G
Sbjct: 372 VGWVESRLRKVTNRFRMESVG 392
>gi|407919057|gb|EKG12314.1| hypothetical protein MPH_10619 [Macrophomina phaseolina MS6]
Length = 590
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 161/273 (58%), Gaps = 16/273 (5%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L +DE +RS+NG RV D++L LVP + F R +K WA+RR +Y+N+ GF GG+
Sbjct: 180 SLLRGLDETDLRSVNGTRVTDEVLSLVPQPKIFRQVTRAVKLWAQRRAIYANIVGFPGGI 239
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA++VAR+CQLYP A ++++ RFF + + W WP P+ML I++ L VW+P+
Sbjct: 240 AWAMMVARICQLYPMACAAVVLGRFFYLMSTWPWPRPIMLKEIEDGPLQVRVWNPQIYPG 299
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
DK H MPIITPAYP M +++N++ ST +V+ + + I ++ K +W LF+ + F
Sbjct: 300 DKRHLMPIITPAYPSMCATHNITHSTQKVIKRELLRASQITSDILSEKRRWRDLFDRHTF 359
Query: 182 F-ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
F + ++ YL + + + + W VES++R+L +IE+ P E V+ +
Sbjct: 360 FTQDFKYYLSIVAASHDKEAQDNWSSSVESKVRKLVGLIEQS----------PAEDVELA 409
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVE 273
+P F G +R +E ++ ++GSV+
Sbjct: 410 QP-----FNKGFKRVHHCKTEEEKEEVLQGSVK 437
>gi|452002314|gb|EMD94772.1| hypothetical protein COCHEDRAFT_1167952 [Cochliobolus
heterostrophus C5]
Length = 578
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 113/347 (32%), Positives = 170/347 (48%), Gaps = 42/347 (12%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L + E RS+NG RV +++L VP F LR +K W+ RRG+Y V G+ GGV W
Sbjct: 185 LEGLSESATRSVNGTRVTNELLDAVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAW 244
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A++VAR+CQLYP A + +VS+FF + W WP PVML I+E +LG VW+P+ D+
Sbjct: 245 AIMVARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVYGGDR 304
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF- 182
H MPIITPA+P M +++ V STLR+M D+F + I + + W+ALFE + FF
Sbjct: 305 AHLMPIITPAFPSMCATHTVMPSTLRIMKDEFGRADKILQHIFAGTKDWNALFERHSFFT 364
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH-------- 234
+ ++ YL V + + + G V+S++R + I+ G PY +
Sbjct: 365 KDHKYYLSVVAASRTKEANSTFSGLVQSKIRHIVKGIDDGQTGIDTARPYINYFERYHRC 424
Query: 235 -------------EYV---------------DTSKPCAHCAFFMGLQRKPGEVVQEGQQF 266
EY+ D + F++GL P +
Sbjct: 425 KDDQFHEVTQGSLEYMIPASEVPADGTAPADDDTHIIYTTTFYIGLTLPPDAT----KSL 480
Query: 267 DIRGSVEEFKLSI-NMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKR 312
DI V +F+ I + ++ + M + V H R +P VF G R
Sbjct: 481 DISYPVSQFRSYITDSDLYDEKLMSVKVVHTRNTALPDDVFLPGETR 527
>gi|301111045|ref|XP_002904602.1| poly(A) polymerase like hypothetical protein [Phytophthora
infestans T30-4]
gi|262095919|gb|EEY53971.1| poly(A) polymerase like hypothetical protein [Phytophthora
infestans T30-4]
Length = 677
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/347 (32%), Positives = 180/347 (51%), Gaps = 44/347 (12%)
Query: 1 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
M V+ +D +VRSL+ RVA IL+LVPN + + LR ++ WA+RRG+YSN GFLGG
Sbjct: 310 MQVMRGMDATSVRSLSVARVASLILELVPNASVYRSCLRVIRLWARRRGLYSNKAGFLGG 369
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLC-----AIDEAELGFSVWD 115
++WA+LV VCQ++P A + LV RFF V WRWP P+++ + E+ WD
Sbjct: 370 ISWAILVCFVCQMFPRASVASLVHRFFSVLATWRWPTPILVAHPSNGGKTDQEVQ---WD 426
Query: 116 PRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVEL----NKAQ 171
P+ N D+ H MPIITP +P +N++ NV+ STLRV+ ++F G I +++ + +
Sbjct: 427 PQHNIHDRAHLMPIITPGFPAVNTAVNVNISTLRVLREEFARGQRIMDDLRRRSLSHPSS 486
Query: 172 WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP 231
W+ LF P Y +++ +++ A N + L W +V SR R+L ++ T HP
Sbjct: 487 WNQLFTPTEVLVRYDHHVAIELRAPNEEALAEWSSFVASRTRKLVETLQH-TPSISALHP 545
Query: 232 YP-------HEYVDTSKPCAHCAFFMGL--------QRKPGE---------VVQEGQQFD 267
P HE ++ + FF+G Q + G+ + + Q+
Sbjct: 546 LPDLVRAQGHETDESDAVVGY--FFIGYTVNVPSTPQPRRGDRRHSARSPVITKNSQEEL 603
Query: 268 IRGSVEE-----FKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEG 309
+ SV +N KPGM++ +++ +P +FP G
Sbjct: 604 AKNSVASATRYFLATELNTAAEKKPGMQVDINYRSWNDLPSAIFPGG 650
>gi|301092990|ref|XP_002997344.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262110742|gb|EEY68794.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 677
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/347 (32%), Positives = 180/347 (51%), Gaps = 44/347 (12%)
Query: 1 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
M V+ +D +VRSL+ RVA IL+LVPN + + LR ++ WA+RRG+YSN GFLGG
Sbjct: 310 MQVMRGMDATSVRSLSVARVASLILELVPNASVYRSCLRVIRLWARRRGLYSNKAGFLGG 369
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLC-----AIDEAELGFSVWD 115
++WA+LV VCQ++P A + LV RFF V WRWP P+++ + E+ WD
Sbjct: 370 ISWAILVCFVCQMFPRASVASLVHRFFSVLATWRWPTPILVAHPSNGGKTDQEVQ---WD 426
Query: 116 PRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVEL----NKAQ 171
P+ N D+ H MPIITP +P +N++ NV+ STLRV+ ++F G I +++ + +
Sbjct: 427 PQHNIHDRAHLMPIITPGFPAVNTAVNVNISTLRVLREEFARGQRIMDDLRRRSLSHPSS 486
Query: 172 WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP 231
W+ LF P Y +++ +++ A N + L W +V SR R+L ++ T HP
Sbjct: 487 WNQLFTPTEVLVRYDHHVAIELRAPNEEALAEWSSFVASRTRKLVETLQH-TPSISALHP 545
Query: 232 YP-------HEYVDTSKPCAHCAFFMGL--------QRKPGE---------VVQEGQQFD 267
P HE ++ + FF+G Q + G+ + + Q+
Sbjct: 546 LPDLVRAQGHETDESDAVVGY--FFIGYTVNVPPTPQPRRGDRRHSARSPVITKNSQEEL 603
Query: 268 IRGSVEE-----FKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEG 309
+ SV +N KPGM++ +++ +P +FP G
Sbjct: 604 AKNSVASATRYFLATELNTAAEKKPGMQVDINYRSWNDLPSAIFPGG 650
>gi|367027594|ref|XP_003663081.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
42464]
gi|347010350|gb|AEO57836.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
42464]
Length = 654
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 137/233 (58%), Gaps = 11/233 (4%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L + E VRSLNG RV D IL LVP F LR +K WA+R+ +Y+N+ G+ GGV
Sbjct: 181 NLLRGLSENEVRSLNGTRVTDDILNLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGV 240
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA--ELGFSVWDPRKN 119
WA+LVARVCQLYP A +++V++FF + W WP PV+L I+ +VW+P+
Sbjct: 241 AWAMLVARVCQLYPKATSAVIVNKFFHIMLKWPWPLPVLLKDIEYGCPVTRVAVWNPKIY 300
Query: 120 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 179
D+ H MPIITP+YP M +++NV S++ V+ D+ + G + E++ K W LF +
Sbjct: 301 ASDRNHRMPIITPSYPSMCATHNVGRSSMAVIKDELEKGVQVTEDIMRGKRPWKDLFTKH 360
Query: 180 LFFES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP 231
FF S +R YL V + W G+VESR+R L KL+ HP
Sbjct: 361 TFFTSGFRYYLTVISSSRTKKAQNVWSGFVESRVRLLV--------NKLEMHP 405
>gi|451845399|gb|EMD58712.1| hypothetical protein COCSADRAFT_265597 [Cochliobolus sativus
ND90Pr]
Length = 571
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/347 (32%), Positives = 170/347 (48%), Gaps = 42/347 (12%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L + E RS+NG RV +++L VP F LR +K W+ RRG+Y V G+ GGV W
Sbjct: 185 LEGLSESATRSVNGTRVTNELLDAVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAW 244
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A++VAR+CQLYP A + +VS+FF + W WP PVML I+E +LG VW+P+ D+
Sbjct: 245 AIMVARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVYGGDR 304
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF- 182
H MPIITPA+P M +++ V STLR+M D+F + I + + W+ALFE + FF
Sbjct: 305 AHLMPIITPAFPSMCATHTVMPSTLRIMKDEFGRADKILQHIFAGTKDWNALFERHSFFT 364
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH-------- 234
+ ++ YL V + + + G V+S++R + I+ G PY +
Sbjct: 365 KDHKYYLSVVAASRTKEANSTFSGLVQSKIRHIVKGIDDGQTGIDTARPYINYFERYHRC 424
Query: 235 -------------EYV---------------DTSKPCAHCAFFMGLQRKPGEVVQEGQQF 266
EY+ D + F++GL P +
Sbjct: 425 KDDQFHEVTQGSLEYMIPASEVPADGTAPADDDTHIIYTTTFYIGLTLPPDAT----KSL 480
Query: 267 DIRGSVEEFKLSI-NMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKR 312
DI V +F+ I + ++ + M + V H R +P VF G R
Sbjct: 481 DISYPVSQFRSYITDSDLYDEKLMSVKVVHTRNTALPDDVFLPGETR 527
>gi|367050218|ref|XP_003655488.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
gi|347002752|gb|AEO69152.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
Length = 652
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 134/222 (60%), Gaps = 3/222 (1%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L + E VRSLNG RV D+IL LVP F LR +K WA+R+ +Y+N+ G+ GGV
Sbjct: 181 NLLRGLSENAVRSLNGTRVTDEILHLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGV 240
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE--AELGFSVWDPRKN 119
WA+LVARVCQLYP A +++V++FF + W WP PV+L I+ VW+P+
Sbjct: 241 AWAMLVARVCQLYPKATSAVIVNKFFNIMLKWPWPLPVLLKDIEYNGPVTRVPVWNPKLY 300
Query: 120 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 179
D+ H MPIITPAYP M +++NV S++ V+ + + G + EE+ L + W LF +
Sbjct: 301 ASDRNHKMPIITPAYPSMCATHNVGRSSMVVIQQELKKGAEVTEEIMLGRRPWKDLFTKH 360
Query: 180 LFFES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE 220
FF S ++ YL V + W G++ESR+R L IE
Sbjct: 361 TFFTSGFKYYLTVISSSRTKKAQNVWSGFIESRVRLLVNKIE 402
>gi|396488901|ref|XP_003842971.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
gi|312219549|emb|CBX99492.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
Length = 577
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 137/231 (59%), Gaps = 1/231 (0%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L+ + E +RS+NG RV ++L VP+ F LR +K W+ RG+Y V G+ GGV W
Sbjct: 183 LDGLAEQAMRSVNGTRVTKELLAAVPHPGSFRHALRAIKLWSNERGIYGAVFGYPGGVAW 242
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A++VAR+CQLYP A + +VS+FF + W WP PV+L I+E +G VW+P+ D+
Sbjct: 243 AIMVARICQLYPFANGATIVSKFFSLMQKWSWPRPVLLKHIEEGAMGLRVWNPQIYHGDR 302
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF- 182
+H MPIITPA+P M S++ V STLR+M ++FQ + I + + W ALFE + FF
Sbjct: 303 SHLMPIITPAFPSMCSTHTVMPSTLRIMQEEFQRADQIMQHIFAGTKTWDALFERHSFFT 362
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP 233
+ ++ YL + + + + G V+S++R + I+ G PYP
Sbjct: 363 KDHKYYLTIVAASRTQEAHERFNGLVQSKVRHIVKGIDDGQTGIDTARPYP 413
>gi|452845518|gb|EME47451.1| hypothetical protein DOTSEDRAFT_69399 [Dothistroma septosporum
NZE10]
Length = 610
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 142/236 (60%), Gaps = 6/236 (2%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L + E +R +NG RV D++L+LVP + F LR +K WA RRGVY NV GF GGV
Sbjct: 179 NLLRGLSETDLRCVNGTRVTDRLLQLVPETKTFRLALRAIKLWASRRGVYGNVYGFPGGV 238
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA-ELGFSVWDPRKNR 120
+A++V R+CQLYP A ++V++FF V WRWP+PV LC + A +LG V +N
Sbjct: 239 GYAMMVVRMCQLYPRAAAPVIVNKFFMVMGKWRWPDPVTLCKREPAPDLGHYVAQWPENP 298
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
+K MPIITP +PCMN++ ++ S L V++ +FQ I ++ K +W ALF
Sbjct: 299 WEKADKMPIITPVFPCMNATGGLTASNLEVILREFQRALKITNDIHNGKQEWQALFARQT 358
Query: 181 FF-ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE---RDTYGKLQCHPY 232
FF E Y++YL + + + AW G+V SRLR+L IE T KL HP+
Sbjct: 359 FFTEDYKHYLCLVTGSRTKEAQQAWSGFVSSRLRKLVSSIESPQSKTAVKL-IHPF 413
>gi|348529712|ref|XP_003452357.1| PREDICTED: poly(A) polymerase gamma-like [Oreochromis niloticus]
Length = 763
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 125/381 (32%), Positives = 180/381 (47%), Gaps = 78/381 (20%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++D +RSLNGCRV D+IL LVPN E+F TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 186 SILRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGV 245
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVAR CQLYPNAV + LV +FF V++ W WPNPV+L +++ L VWDPR +
Sbjct: 246 SWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVS-- 303
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
ITP + YL
Sbjct: 304 --------ITPVF--------------------------------------------YLL 311
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
+Y+ + A+ ++ L W G VES++R L +ER+ Y L H P + + +
Sbjct: 312 M--VLHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPGSKE 368
Query: 242 PCAHCAF----FMGLQRKP---GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
F F+G+ K E V +DI+ + N K GM+I +
Sbjct: 369 NRNENDFVSMWFIGIIFKKVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 428
Query: 295 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ-------------TGSGLKRKK 341
H+++KQ+ Y+ PE ++ + +A RSS G+ + T SG
Sbjct: 429 HVKKKQLHQYLPPEVVQKKKR-SIAELNRSSNGGSSKRFSLDNSHLDSSRDTDSGTPFNS 487
Query: 342 DPESVDQDGPEKRQSISPQKQ 362
P + + S+SP KQ
Sbjct: 488 PPSKTSKPASDTDDSVSPPKQ 508
>gi|317026523|ref|XP_001389757.2| poly(A) polymerase Pap [Aspergillus niger CBS 513.88]
Length = 428
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 169/354 (47%), Gaps = 66/354 (18%)
Query: 25 LKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVS 84
LK+ N E T R L WA+RR +YSN+ GF GGV WA+LVARVCQLYP A S++V
Sbjct: 35 LKVQNNFESPAETERSL--WAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVG 92
Query: 85 RFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVS 144
+FFR+ W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M +++NVS
Sbjct: 93 KFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVS 152
Query: 145 TSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANADDLLA 203
ST V++ + Q G I +++ L + +W LF + FF + Y+ YL + + +
Sbjct: 153 MSTKAVILRELQRGGDIVDKIFLKQLRWEDLFARHTFFTKDYKYYLSITASSRTKEAESV 212
Query: 204 WKGWVESRLRQLTLMIERDTYGKLQCHPYPH----------------------------- 234
W G VES++R L ++R + HP+P
Sbjct: 213 WSGLVESKIRHLVGALDRKATIAI-AHPFPKGFERVHRVSSEEEIEAVKTGSTKYQDKGT 271
Query: 235 --EYVDTSKPCAHCA-----------------------------FFMGLQRKPGEVVQEG 263
E D K AH A +++GL+ KP E
Sbjct: 272 KTETTDEMKDAAHQAAAQNGAENTDVAAAENKPVDDTHVMYTTTYYIGLELKPLE-PGAS 330
Query: 264 QQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQIPPYVFPEGYKRTRHP 316
+ DI + FK + + ++PG+ ++ ++H+R +P VF G R P
Sbjct: 331 RSLDISTDAQIFKSTCTSWPGYQPGINDLAITHVRNFDLPEDVFQPGETRPTRP 384
>gi|348669628|gb|EGZ09450.1| hypothetical protein PHYSODRAFT_304981 [Phytophthora sojae]
Length = 695
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 143/240 (59%), Gaps = 9/240 (3%)
Query: 1 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
+ V+ +D +VRSL+ RVA IL+LVPN F +TLR ++ WA+RRG+YSN G+LGG
Sbjct: 329 VQVMRGMDATSVRSLSVARVASLILELVPNASVFRSTLRVIRLWARRRGLYSNKAGYLGG 388
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAID---EAELGFSVWDPR 117
++WALLV VCQ++P A + LV RFF V WRWP P+++ + + G WDP
Sbjct: 389 ISWALLVCFVCQMFPRASVASLVHRFFSVLASWRWPTPILVAHPSNGGKVDNGVQ-WDPA 447
Query: 118 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVEL----NKAQWS 173
N D+ H MPIITP +P +N++ NV+ STLRV+ ++F G I +++ + + W+
Sbjct: 448 HNIHDRAHLMPIITPGFPAVNTAVNVNLSTLRVLREEFARGQRIMDDLRRRSLSHPSSWN 507
Query: 174 ALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP 233
LF P Y +++ +++ A N + L W +V SR R+L ++ T HP P
Sbjct: 508 QLFTPTEVLVRYDHHIAIELRAPNEEALAEWSSFVASRTRKLVETLQH-TPSVATLHPLP 566
>gi|269859597|ref|XP_002649523.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
gi|220067074|gb|EED44542.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
Length = 473
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 164/301 (54%), Gaps = 15/301 (4%)
Query: 7 VDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 66
+DE + S+NG RV D +L L+PN E F LR +KFWAKRR +Y N G+ GGV +++
Sbjct: 179 MDEKCILSINGSRVTDSMLNLIPNKETFHMALRAIKFWAKRRYIYGNAYGYFGGVAFSIS 238
Query: 67 VARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH 126
VAR+CQLYPN +V ++F Y+ W WP P++L I + VWD +K D+ H
Sbjct: 239 VARICQLYPNKSSYDIVCKYFEYYSNWTWPEPILLKPIVDHHYNLKVWDNQKYPADRYHK 298
Query: 127 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYR 186
MPIITPAYP M S++NV ST ++ +F+ I +N + +F+ FF Y+
Sbjct: 299 MPIITPAYPSMCSTHNVFQSTFDLICREFRRSTEIINN-SINSTDFLQIFDNTDFFRKYK 357
Query: 187 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC 246
Y+ + V A+ + + +W G+VES++R L E + P+P ++ C
Sbjct: 358 LYINIK-VKADKESIKSWSGFVESKVRILCSKFEA-VESIVAAIPFPKPFIKDET----C 411
Query: 247 AFFMGLQRKPGEVVQEGQQ---FDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPP 303
FF+G+ E+++ G Q + G ++EF +N + M+I +S ++K +
Sbjct: 412 NFFIGI-----EILKTGSQNKKIYVDGQIKEFIDFLNEWNGKTAIMKIEISAEKKKSMQT 466
Query: 304 Y 304
+
Sbjct: 467 F 467
>gi|110740407|dbj|BAF02098.1| poly(A) polymerase like protein [Arabidopsis thaliana]
Length = 348
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 121/170 (71%), Gaps = 8/170 (4%)
Query: 210 SRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIR 269
SR RQLTL IERDT G L CHP P+EYVDT++ HCAFFMGLQR G QE QQFDIR
Sbjct: 1 SRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQFDIR 60
Query: 270 GSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS--QQRSSEN 327
G+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+PP+VFP GY+R R R + +S E+
Sbjct: 61 GTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQNLPGGKSGED 120
Query: 328 GNEYQTGSGL----KRKKDPESVD--QDGPEKRQSISPQKQDSLSPDHLA 371
G+ +GS + KRK D E +D + PEKR S+SPQ D +SP++ A
Sbjct: 121 GSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSA 170
>gi|324504415|gb|ADY41908.1| Poly(A) polymerase gamma [Ascaris suum]
Length = 560
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/267 (39%), Positives = 152/267 (56%), Gaps = 30/267 (11%)
Query: 57 FLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA-------EL 109
FLGGV+WA+LVAR CQLYPNA P+ L+ +FF V+T W WP+PV+L D+
Sbjct: 50 FLGGVSWAILVARTCQLYPNAAPAKLIQKFFLVFTRWEWPHPVLLKDCDQTPRPPDMQSF 109
Query: 110 GFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNK 169
VWDPR D+ H MPIITPA+P NS++NV+ ST +V+M++ + G I E+ K
Sbjct: 110 QELVWDPRTRSCDRYHLMPIITPAFPEQNSTFNVTKSTRQVIMNELEEGLAITIEILSGK 169
Query: 170 AQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQC 229
A+WS LF+ FF Y++++ + VAAN +D L W G VES++R L +ER+ L C
Sbjct: 170 AEWSKLFDEVNFFSRYKHFIVLLCVAANENDQLVWSGLVESKIRHLIGNLERNPCVSL-C 228
Query: 230 HPYPHEYVDTS---------KPCAHCAFFMGLQ-----RKPGEVVQEGQQF-DIRGSVEE 274
H P + S PC +F+G++ +K ++ E QQF D +
Sbjct: 229 HINPQHFTPISPLPIEISIENPCCQ-MWFIGMELNKQLKKNIDLTDEIQQFNDAVMRAAD 287
Query: 275 FKLSINMYMFWKPGMEICVSHIRRKQI 301
F+ N+Y PGM + S++RR +
Sbjct: 288 FQ---NVYC---PGMAVLPSYVRRADL 308
>gi|403274237|ref|XP_003928889.1| PREDICTED: poly(A) polymerase alpha [Saimiri boliviensis
boliviensis]
Length = 495
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 143/247 (57%), Gaps = 14/247 (5%)
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 125 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 184
H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQK 120
Query: 185 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDT 239
Y++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 121 YKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD- 179
Query: 240 SKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVS 294
K + +GL K E E D+ ++ F + +IN MF + M+I
Sbjct: 180 -KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAM 236
Query: 295 HIRRKQI 301
H++RKQ+
Sbjct: 237 HVKRKQL 243
>gi|402877145|ref|XP_003902301.1| PREDICTED: poly(A) polymerase alpha [Papio anubis]
gi|119602049|gb|EAW81643.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
gi|119602053|gb|EAW81647.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
Length = 495
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 143/247 (57%), Gaps = 14/247 (5%)
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 125 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 184
H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQK 120
Query: 185 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDT 239
Y++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 121 YKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD- 179
Query: 240 SKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVS 294
K + +GL K E E D+ ++ F + +IN MF + M+I
Sbjct: 180 -KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAM 236
Query: 295 HIRRKQI 301
H++RKQ+
Sbjct: 237 HVKRKQL 243
>gi|308472139|ref|XP_003098298.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
gi|308269146|gb|EFP13099.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
Length = 343
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 183/353 (51%), Gaps = 61/353 (17%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++DE ++RSLNG RVA+Q+LKLVPN + FC +LR +K WAK GVYSN GF GG+
Sbjct: 30 SLLVNLDESSIRSLNGIRVAEQLLKLVPNRDTFCQSLRAIKLWAKNHGVYSNAMGFFGGI 89
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVA+ CQLYPNA PS ++ + F V++ W+WP+PV+L
Sbjct: 90 TWAILVAKTCQLYPNAAPSKIIQKVFFVFSTWKWPSPVVL-------------------- 129
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
+ C++S STL ++ ++ + IC++++ A W+ LFE F
Sbjct: 130 ----------KQFGCVDSKLANLKSTLHIIQEEMKSALEICDQIQKGNATWNDLFEEINF 179
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F Y++++ + I N D + G+ ES++RQL +IER++ K H P + +
Sbjct: 180 FSRYKHFVALTI---NEDTNI---GFFESKIRQLVQIIERNSQVK-TAHINPRKLKNIRN 232
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG----MEICVSHIR 297
+F+GL E + + D+ +E FK NM G +++ ++++
Sbjct: 233 ---ESTWFLGL-----EFTENAKNLDLTSEIEGFKR--NMARQQSKGIVGQIQLDATYVK 282
Query: 298 RKQIPPYVFPEGYKRTRHPR---LASQQRSSENGNEYQTGSGLKRKKDPESVD 347
R + ++ KR R + A+++R + +G+ +T K P +D
Sbjct: 283 RSDLIKFISLGDLKRGRFVKSKTAANRKRPASSGDSTET-------KKPRVID 328
>gi|1709573|sp|P51005.1|PAPO2_XENLA RecName: Full=Poly(A) polymerase alpha-B; Short=PAP-alpha-B;
AltName: Full=Polynucleotide adenylyltransferase alpha-B
gi|643646|gb|AAC59746.1| poly(A) polymerase type 2 [Xenopus laevis]
Length = 484
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 104/263 (39%), Positives = 150/263 (57%), Gaps = 18/263 (6%)
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 125 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 184
H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L KA+WS LF+ FF+
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLVKAEWSKLFDAPNFFQK 120
Query: 185 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDT 239
Y++Y+ + A L W G VES++R L +E++ + L Q P P E ++
Sbjct: 121 YKHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPSPSE--NS 178
Query: 240 SKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVS 294
K + +GL K E E D+ ++ F + +IN MF + ++I
Sbjct: 179 EKEEFRTMWVIGLVFKKME-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ETEIKIAAM 236
Query: 295 HIRRKQ----IPPYVFPEGYKRT 313
H++RKQ +P +V P+ K +
Sbjct: 237 HVKRKQLHQLLPSHVLPKKKKHS 259
>gi|134055882|emb|CAK44143.1| unnamed protein product [Aspergillus niger]
Length = 393
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 183/391 (46%), Gaps = 76/391 (19%)
Query: 35 CTTLRCL--KFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTM 92
T L C WA+RR +YSN+ GF GGV WA+LVARVCQLYP A S++V +FFR+
Sbjct: 2 ITGLLCAPSSLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNK 61
Query: 93 WRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMM 152
W WP PV+L I++ L VW+P+ D+ H MPIITPAYP M +++NVS ST V++
Sbjct: 62 WAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAVIL 121
Query: 153 DQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANADDLLAWKGWVESR 211
+ Q G I +++ L + +W LF + FF + Y+ YL + + + W G VES+
Sbjct: 122 RELQRGGDIVDKIFLKQLRWEDLFARHTFFTKDYKYYLSITASSRTKEAESVWSGLVESK 181
Query: 212 LRQLTLMIERDTYGKLQCHPYPH-------------------------------EYVDTS 240
+R L ++R + HP+P E D
Sbjct: 182 IRHLVGALDRKATIAI-AHPFPKGFERVHRVSSEEEIEAVKTGSTKYQDKGTKTETTDEM 240
Query: 241 KPCAHCA-----------------------------FFMGLQRKPGEVVQEGQQFDIRGS 271
K AH A +++GL+ KP E + DI
Sbjct: 241 KDAAHQAAAQNGAENTDVAAAENKPVDDTHVMYTTTYYIGLELKPLE-PGASRSLDISTD 299
Query: 272 VEEFKLSINMYMFWKPGM-EICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNE 330
+ FK + + ++PG+ ++ ++H+R +P VF G R P+ +++ +G
Sbjct: 300 AQIFKSTCTSWPGYQPGINDLAITHVRNFDLPEDVFQPGETRPTRPKKKIIKKAEISG-- 357
Query: 331 YQTGSGLKRKKDPESVDQDGPEKRQSISPQK 361
+K++ ES+D +K + Q+
Sbjct: 358 --------QKRNIESLDVSARKKAKVAYEQR 380
>gi|384080895|dbj|BAM11110.1| poly(A) polymerase alpha, partial [Siebenrockiella crassicollis]
Length = 352
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/248 (41%), Positives = 144/248 (58%), Gaps = 14/248 (5%)
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+
Sbjct: 1 AMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDR 60
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 183
H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+
Sbjct: 61 YHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQ 120
Query: 184 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVD 238
Y++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 121 KYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD 180
Query: 239 TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICV 293
K + +GL K E E D+ ++ F + +IN MF + M+I
Sbjct: 181 --KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAA 236
Query: 294 SHIRRKQI 301
H++RKQ+
Sbjct: 237 MHVKRKQL 244
>gi|123480837|ref|XP_001323419.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
gi|121906284|gb|EAY11196.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
Length = 508
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 173/312 (55%), Gaps = 12/312 (3%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL ++ + +VR+LN RV + ++KLVPN+++F T L+ +++WA +RG+Y NV G+ GGV
Sbjct: 183 SVLENLSKLSVRALNSLRVNNMVIKLVPNLDNFKTLLKFVRYWAFKRGLYGNVYGYFGGV 242
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
N A+L A VCQ YP A P+ML FF + W WP P+ + + EL WDP
Sbjct: 243 NLAILSAFVCQRYPTASPAMLALYFFSEISQWTWPTPIYINRPNYGEL--LSWDP-TTES 299
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D MPIITPAYP NS + +TS+ ++ + I + WSA+ E + F
Sbjct: 300 DHNDVMPIITPAYPSTNSQRSATTSSRNRIIQEMVKALQIMPNIITGDLPWSAVCEDHEF 359
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP-YPHEYVDTS 240
FESY+NY+++DI A D WKG V S++++L +E +++C P +P + +
Sbjct: 360 FESYKNYIEIDIRAEGLADYNWWKGTVISKVKRLITSLE--AIERVKCAPIFPSSFDREN 417
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSH---IR 297
+ F+GL+ + + EG++ + +++++ I Y + + + I
Sbjct: 418 NNKYQGSIFIGLETEKTK-DDEGKKVNPSAAIKKYLEEI--YKLTNRPLSTKIENPQVIN 474
Query: 298 RKQIPPYVFPEG 309
RK+IP + FP G
Sbjct: 475 RKKIPDFCFPNG 486
>gi|440493736|gb|ELQ76169.1| Poly(A) polymerase, nucleotidyltransferase [Trachipleistophora
hominis]
Length = 696
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 171/335 (51%), Gaps = 48/335 (14%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++DE +V SLNG RV D+IL LVPN F LRC+K+WAKRR + ++ G+ GGV +A+
Sbjct: 353 NLDEKSVLSLNGNRVTDEILSLVPNKTVFHGALRCIKYWAKRRALTGHLYGYFGGVAYAI 412
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
VAR+CQL+PN ++ ++F +Y W+WP PVML I+ VWDP+ + DK H
Sbjct: 413 SVARICQLFPNVCEYTIICKYFELYKEWKWPMPVMLKKIENLNYNLKVWDPKIHPSDKFH 472
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MP+ITP+YP M S++N+ ST++ ++ + + + E A+W+ F FF+ Y
Sbjct: 473 KMPVITPSYPSMCSTHNIMNSTMKRYKEELERAHKLLVE----GAEWNEFFRGTDFFQRY 528
Query: 186 RNYLQVDIVAANA-----DDLLA--------------------WKGWVESRLRQLTLMIE 220
R++L V I+ NA +D + W+G V SR+R L+ +E
Sbjct: 529 RSFLAVFILLKNAGCTTNNDARSEQEITNEQASGAKETSMHKMWQGHVNSRIRFLSTKLE 588
Query: 221 R--------------DTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQF 266
D G L HP ++ + C+ F+ L + + + F
Sbjct: 589 TVEQLDSAPPFPQTFDMCGFLGLHPLA--FIPKNALCSLT--FIALDMADSKQLLRKKVF 644
Query: 267 DIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
I +EEFK + + M++ + ++RK +
Sbjct: 645 -IDAPIEEFKEMVFDWDKRTEDMDLVMRAMKRKDV 678
>gi|428168713|gb|EKX37654.1| hypothetical protein GUITHDRAFT_41551, partial [Guillardia theta
CCMP2712]
Length = 336
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 98/243 (40%), Positives = 136/243 (55%), Gaps = 6/243 (2%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +VD +V SLN RV D I LVPN+ F ++ LKFWAK+RGVY+N GFLG ++
Sbjct: 76 LKNVDPESVASLNSVRVTDTIRSLVPNLISFKYCIQALKFWAKKRGVYNNGLGFLGSISL 135
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI--DEAELGFSVWDPRKNRR 121
++ AR+CQLYP A+PS L+ FF Y W+WP PV L I + +L VW
Sbjct: 136 EIMAARICQLYPKALPSRLLYFFFFTYCQWKWPQPVELAEIVANSHDLNLPVWGYGATEM 195
Query: 122 -DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
D+ H MPII+P YP N++ VS STL++M + F +C+++ KA W LFEP
Sbjct: 196 SDRRHLMPIISPCYPAQNTAALVSRSTLKIMKEMFIRAMGVCKQIHEGKAGWCDLFEPVD 255
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER--DTYGKLQCHPYPHEYVD 238
F +Y N+LQ+ A + D WKG+ + + + +ER D Y + HP Y
Sbjct: 256 LFSTYANFLQIQASARSKADHNMWKGFCAANIHNMISYLERCPDAYLD-RAHPIQRSYAK 314
Query: 239 TSK 241
K
Sbjct: 315 PRK 317
>gi|297695842|ref|XP_002825134.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Pongo abelii]
Length = 497
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 143/249 (57%), Gaps = 16/249 (6%)
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRK--NRRD 122
+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVSVNPSD 60
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF
Sbjct: 61 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 120
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYV 237
+ Y++Y+ + A L W G VES++R L +E++ + L Q P P E
Sbjct: 121 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENP 180
Query: 238 DTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEIC 292
D K + +GL K E E D+ ++ F + +IN MF + M+I
Sbjct: 181 D--KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIA 236
Query: 293 VSHIRRKQI 301
H++RKQ+
Sbjct: 237 AMHVKRKQL 245
>gi|429964357|gb|ELA46355.1| hypothetical protein VCUG_02160 [Vavraia culicis 'floridensis']
Length = 708
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++DE +V SLNG RV D+IL LVPN + F LRC+K+WAKRRG+ ++ G+ GGV +A+
Sbjct: 342 NLDEKSVLSLNGNRVTDEILSLVPNKKVFHGALRCIKYWAKRRGLTGHLYGYFGGVAYAI 401
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
VAR+CQL+PN ++ ++F +Y W+WP PVML I+ VWDP+ + DK H
Sbjct: 402 SVARICQLFPNMCEYTMICKYFELYKEWKWPTPVMLKKIENLNYNLKVWDPKIHPSDKFH 461
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
MP+ITP+YP M S++N+ ST++ ++ + G+ + E +W F FF+ Y
Sbjct: 462 KMPVITPSYPSMCSTHNIINSTMKRYKEELERGHRLLAE----GKEWKEFFRSTDFFQRY 517
Query: 186 RNYLQVDIV 194
+++L V I+
Sbjct: 518 KSFLAVFIL 526
>gi|145505515|ref|XP_001438724.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405896|emb|CAK71327.1| unnamed protein product [Paramecium tetraurelia]
Length = 487
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 161/284 (56%), Gaps = 24/284 (8%)
Query: 7 VDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 66
VDE + RSLNG +V+D K + + + + L+ +K WA RG+Y NV G+LGG++W +L
Sbjct: 176 VDEKSSRSLNGLKVSDYFSKYC-HQKSYLSFLKFIKAWAINRGIYGNVMGYLGGISWQIL 234
Query: 67 VARVCQLYPNAVPSMLVSRFFRVYTMWRWPN-PVMLCAIDEAELGFSVWDPRKNRRDKTH 125
++ QLYPN L+ RFF +++ W+W PV++ DE +W + +
Sbjct: 235 THKIFQLYPNYSVQGLIERFFFIFSQWKWNELPVVIQKCDE------IWRNSLFEQQQKQ 288
Query: 126 H--MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 183
H M I+TP YP +NS+YNVS T ++ +Q + N I +++ L++ QWS L + FF+
Sbjct: 289 HNVMSILTPVYPYINSAYNVSNCTFTIIEEQLKLANIIMQKICLSELQWSDLLKKIQFFD 348
Query: 184 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMI-ERDTYGKLQCHPYPH----EYV- 237
Y YLQ+ ++ N DDL+ WK +ES+LR+L M+ E D ++ H YP +YV
Sbjct: 349 IYYTYLQIRALSKNKDDLIQWKSHIESKLRKLNKMLDEGDVNKAIEFHLYPKSFQTDYVQ 408
Query: 238 ----DTSKPCAHC--AFFMGLQRKPGEVVQEGQQFDIRGSVEEF 275
DT + +FF G++ K E+V+E + DI + +F
Sbjct: 409 GDENDTPGSLFNFSESFFYGIRIKDEELVKE--KLDIENIIRQF 450
>gi|402468353|gb|EJW03519.1| hypothetical protein EDEG_00201 [Edhazardia aedis USNM 41457]
Length = 1051
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 181/368 (49%), Gaps = 83/368 (22%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D+ ++ S+NG RV D ++ LVPNV+ F + LR +K+WAKRRG+Y N G+ GGV +A+
Sbjct: 663 NMDDKSILSINGSRVTDMLINLVPNVKVFHSALRAIKYWAKRRGIYGNSFGYPGGVAYAI 722
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
LVAR+CQ YPN ++ +FF +Y+ W+WPNPV+L + +WDP+ ++ D+ H
Sbjct: 723 LVARICQYYPNKDSYTILYKFFEIYSNWKWPNPVLLKHNVDRNFNLKIWDPKVHQTDRMH 782
Query: 126 HMPIITPAYPCMNSSYNVSTST-------LRVMMDQFQ--------------YGN----- 159
MPIITPAYP + S++NV+ +T L+ +D F+ +G+
Sbjct: 783 KMPIITPAYPSICSTHNVTNTTLGVINEELKRCLDIFKESKNIDSSFDETKIFGHESDIN 842
Query: 160 --------------TICEEVELN---KAQW---------------------SALFEPYLF 181
I E+ E N K +W LF+ F
Sbjct: 843 CASKQSIDPKSKKLKIGEDHENNINTKVKWDLNNLSFDNLKVFYEKFYGLLKKLFQQSDF 902
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERD---TYG-KLQCHPYPHEYV 237
F+ Y+ YL + + DD WKG++ES++R L +E + G ++ P+P +V
Sbjct: 903 FKKYKFYLNIKLTN---DD--KWKGFIESKIRLLCAKLENSEGFSIGYMIKAVPFPQSFV 957
Query: 238 DTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIR 297
FF+GL K + + +I V +F +N + G EI + +
Sbjct: 958 YND----FVHFFVGLDYK------DRIKINIDKPVNDFLRILNDWDKKDEGSEISIKINK 1007
Query: 298 RKQIPPYV 305
+K+I ++
Sbjct: 1008 KKEIGEFL 1015
>gi|323453660|gb|EGB09531.1| hypothetical protein AURANDRAFT_24142, partial [Aureococcus
anophagefferens]
Length = 402
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 145/261 (55%), Gaps = 29/261 (11%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVP-NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
+VL VDE T +SLNG RV + I KLV N E F LR + WAKRRG+YSN G+ GG
Sbjct: 143 AVLQGVDEATEKSLNGPRVTNLIYKLVSHNYESFLQVLRVARVWAKRRGIYSNKLGYFGG 202
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVW--DPRK 118
+N+ +LVA +CQL+P A PS L+ +FF ++ W WP P +LC + GF VW + +
Sbjct: 203 INFNILVALICQLFPKATPSYLLCKFFAIFAKWDWPAPAILCRPLDHGYGFEVWGQNAEQ 262
Query: 119 NRRDKTHH------MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ- 171
R +H MPI+TPAYP MNS+ NV+ + V+ D+F G +C+ + A+
Sbjct: 263 LRGRMAYHNLRNNLMPIVTPAYPAMNSAANVNPWSFAVLRDEFARGAEVCKRIVARHAEL 322
Query: 172 --------------WSALFEPYLFFESYRNYLQVDIVA-ANADDLLAWKGWVESRLRQLT 216
W L E FF+ Y YL V+++ +D +KG++ SRLR+L
Sbjct: 323 AENGAVDPDVGGPLWDELVEKTDFFDKYDAYLAVNVLGDGEKEDFDNFKGFLSSRLRKL- 381
Query: 217 LMIERDTYGKLQ-CHPYPHEY 236
+E+ + L+ H +P EY
Sbjct: 382 --VEKMGHLPLKMIHLFPKEY 400
>gi|378756776|gb|EHY66800.1| poly(A) polymerase [Nematocida sp. 1 ERTm2]
Length = 507
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 130/222 (58%), Gaps = 4/222 (1%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L + E + SLNG RV D+IL VPN+E F TLR +K+WA++R VY + G++GGV
Sbjct: 161 LLKHMSEKCILSLNGNRVTDEILAQVPNIETFHKTLRFMKYWAQKRQVYGHAYGYMGGVA 220
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
+AL VA+VCQ+YP+A + +FF V++ W WP PV++ + + VW+P+ N
Sbjct: 221 YALCVAKVCQMYPSADAFKTIEKFFEVFSKWAWPQPVIIKEVPDCNYNLKVWNPKVNVHH 280
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ----WSALFEP 178
K MP+ITP YP + S++N++TSTL VM +FQ G I E NK + L E
Sbjct: 281 KNDKMPVITPVYPPLCSTHNITTSTLFVMKREFQRGTAIFAESLQNKTEPFKVLDELCED 340
Query: 179 YLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE 220
FF ++ Y + + N+ + + G+ E+R+R +E
Sbjct: 341 TDFFTRHKTYFMIAMACDNSKEFGRFMGFAETRVRMFAQKLE 382
>gi|224001714|ref|XP_002290529.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973951|gb|EED92281.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 367
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 137/231 (59%), Gaps = 18/231 (7%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEH----FCTTLRCLKFWAKRRGVYSNVTGFL 58
VL+ VD T +SLNG RV + I LV + F T +R ++ WAK RG+YSN G+
Sbjct: 138 VLSGVDSATEKSLNGPRVTNLIAALVSGTDERYQTFLTVVRLVRKWAKARGLYSNKMGYW 197
Query: 59 GGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRK 118
GGVN + VA V QLYPNA P+ L+ +FF V+ WRWPNPVML +AELG VW+ +
Sbjct: 198 GGVNINIAVALVLQLYPNACPASLLRKFFLVFKSWRWPNPVMLTKPHDAELGLPVWNSFQ 257
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV-------ELNKAQ 171
+ P++TPAYP MNS+ +VS TL+++ ++F G+ + +++ L+K +
Sbjct: 258 -AANMRQVAPMVTPAYPAMNSTLSVSRQTLQILHEEFCRGHNVVDKLYKDFQKGALDKDK 316
Query: 172 ------WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLT 216
W LFEP FF Y YL + IV + D AW G+VESRLR+L
Sbjct: 317 IESGDIWKELFEPSDFFIGYPYYLSLCIVGPSQADAQAWAGFVESRLRKLV 367
>gi|428177976|gb|EKX46853.1| hypothetical protein GUITHDRAFT_162826 [Guillardia theta CCMP2712]
Length = 572
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 182/352 (51%), Gaps = 27/352 (7%)
Query: 8 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 67
D + LNG RV ++L+ VPN+E+F LR +K WA+RR +YS + GF GGV W ++
Sbjct: 200 DTKDITCLNGPRVTYELLQRVPNIENFKVLLRAIKLWARRREIYSKIIGFPGGVAWGIMA 259
Query: 68 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-------LGFSVWDPRKNR 120
A+V QLYP PS+L+ +FF +Y W++ + +++ +E + WDP + R
Sbjct: 260 AQVAQLYPKMCPSLLLEKFFHLYKHWKFEDAIIVAPPEECQAPDGQERYNLHAWDPTR-R 318
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
+ +ITP YP NS++NV+ S L V+ ++ N++ + + ++ ++ LFEP +
Sbjct: 319 HFSRRPLTVITPTYPMDNSTFNVTDSALNVIRNEISRANSLTQGLAQGESSYNDLFEPAM 378
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCH-------PYP 233
FF+ Y ++Q++++ + + A+ G+VES++R+L + G H P P
Sbjct: 379 FFKQYGTFVQIEVLGSEK-HIEAFSGYVESQIRKLVEKLTTSQLGLYIVHPCTRHFGPIP 437
Query: 234 HEYVDTSK----PCAHCAFFMGLQRKPGEVVQ---EGQQFDIRGSVEEFKLSINMYMFWK 286
E++ P + F++GL+ V GQ D V+EF L I++ +
Sbjct: 438 AEHLGGGDPEDGPWQNIFFYLGLKFDDNLVRHMKASGQSVDFTQPVKEFLLGIHITDPTQ 497
Query: 287 PGMEICVSHIRRKQIPPYVFPEGYKRTRHP--RLASQQRSSENGNEYQTGSG 336
+ I V ++R+ +P +V E Y +++ RL + E+ + G
Sbjct: 498 TSISIKV--VKRRALPEWVKKEYYSQSKFEGMRLEDEHGELESAKKRALGEA 547
>gi|147856999|emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
Length = 604
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 168/311 (54%), Gaps = 18/311 (5%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L ++DE + +SL+G R + IL+LVPNVE+F + LRC+K WAKRRGVY N+ G+ GGV+
Sbjct: 269 LRNIDETSWKSLSGVRANECILQLVPNVENFQSILRCIKLWAKRRGVYGNLFGYFGGVHL 328
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+L A VCQ P+A ++L+S FF+ ++ W WP PV A+++ L P R+
Sbjct: 329 AILAAFVCQKNPHANLNVLMSSFFKTFSGWPWPTPV---ALEDGRL------PTGGTRET 379
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 183
MPI P P N++ ST + + G+ + ++ W+ +FEP+ + +
Sbjct: 380 RALMPIQLPCSPYGYCHSNITKSTFYRITTELTLGHALTRDLLRLDFDWNDIFEPFCYSK 439
Query: 184 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC 243
Y ++++ + ++N D+L W GWV+SR R L +E + G C P P E++D
Sbjct: 440 KYSRFIKIYLSSSNQDELGDWVGWVKSRFRFLLAKVE-EVQG--LCDPNPTEFIDPDAGE 496
Query: 244 AHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPP 303
+ FF G+Q PG + DI ++F +IN + P ++ +S I Q+P
Sbjct: 497 PNVVFFWGVQ--PGRI----NFSDIDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPG 550
Query: 304 YVFPEGYKRTR 314
Y + R R
Sbjct: 551 YAXLDTGSRNR 561
>gi|225432026|ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
gi|296083219|emb|CBI22855.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 165/301 (54%), Gaps = 18/301 (5%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L ++DE + +SL+G R + IL+LVPNVE+F + LRC+K WAKRRGVY N+ G+ GGV+
Sbjct: 228 LRNIDETSWKSLSGVRANECILQLVPNVENFQSILRCIKLWAKRRGVYGNLFGYFGGVHL 287
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+L A VCQ P+A ++L+S FF+ ++ W WP PV A+++ L P R+
Sbjct: 288 AILAAFVCQKNPHANLNVLMSSFFKTFSGWPWPTPV---ALEDGRL------PTGGTRET 338
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 183
MPI P P N++ ST + + G+ + ++ W+ +FEP+ + +
Sbjct: 339 RALMPIQLPCSPYGYCHSNITKSTFYRITTELTLGHALTRDLLRLDFDWNDIFEPFCYSK 398
Query: 184 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC 243
Y ++++ + ++N D+L W GWV+SR R L +E + G C P P E++D
Sbjct: 399 KYSRFIKIYLSSSNQDELGDWVGWVKSRFRFLLAKVE-EVQG--LCDPNPTEFIDPDAGG 455
Query: 244 AHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPP 303
+ FF G+Q PG + DI ++F +IN + P ++ +S I Q+P
Sbjct: 456 PNVVFFWGVQ--PGRI----NFSDIDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPG 509
Query: 304 Y 304
Y
Sbjct: 510 Y 510
>gi|82655167|emb|CAJ43765.1| poly(A) polymerase alpha [Oncorhynchus mykiss]
Length = 167
Score = 175 bits (444), Expect = 4e-41, Method: Composition-based stats.
Identities = 76/130 (58%), Positives = 95/130 (73%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D +RSLNGCRV D+IL LVPN+E+F TLR +K WAKR +YSN+ GFLGGV+
Sbjct: 38 LLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRTIKLWAKRHNIYSNILGFLGGVS 97
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQLYPNAV S LV +FF V++ W WPNPV+L ++ L VW PR D
Sbjct: 98 WAMLVARTCQLYPNAVASTLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWGPRVTPSD 157
Query: 123 KTHHMPIITP 132
+ H MPIITP
Sbjct: 158 RYHLMPIITP 167
>gi|340506959|gb|EGR32994.1| nuclear poly polymerase npap nucleotidyltransferase protein
binding, putative [Ichthyophthirius multifiliis]
Length = 502
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 182/318 (57%), Gaps = 28/318 (8%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKL--VPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
+L +DE + +S NG RVA+ + K + N E+F + L+C+K WA+ RG+YSN+ G+L G
Sbjct: 187 MLLGMDERSCKSFNGYRVAEWLSKKENIQNYENFQSILKCIKLWAQNRGIYSNIIGYLSG 246
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN-PVMLCAIDE----AELGFSVWD 115
+ W +LV+++CQL+PN + L+ RFF +Y+ WRW + PV + I + ++L W
Sbjct: 247 IGWTILVSKICQLFPNYSLNQLLERFFFLYSRWRWQDFPVQVEYIVDDVANSKLSADQWR 306
Query: 116 PRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYG-NTICEEVELNKAQWSA 174
P + M IITP +PCMN ++NVS++TLR++ +Q +G TIC +++ +S
Sbjct: 307 P-----EYKSSMMIITPCFPCMNCAHNVSSTTLRIIQEQLWHGYETIC-KIQNGSKNYSD 360
Query: 175 LFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTY-GKLQCHPYP 233
LF+ + FF+ Y+++L++ I+A N +D WKG VES LR+LT + E Y L+ HPYP
Sbjct: 361 LFKSFKFFKKYKHFLEIKILATNKNDYTVWKGHVESGLRKLTRLFESPQYMNLLEVHPYP 420
Query: 234 ---HEYVDTS-----KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFW 285
++D + K C ++ GL E + +++ + F + MY
Sbjct: 421 SYIENFLDDTQSQKNKYKFQCKYYYGLMCLQSE---NNESINLKEACVYFVEQLEMYPMN 477
Query: 286 K--PGMEICVSHIRRKQI 301
K M I SH+ R ++
Sbjct: 478 KVLESMNIQCSHLLRSEL 495
>gi|297829196|ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata]
gi|297328320|gb|EFH58739.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata]
Length = 507
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 154/299 (51%), Gaps = 20/299 (6%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L D+DE + +SL+G R IL+LVP++E F + LRC+K WAKRRGVY N+ GFLGGV+
Sbjct: 172 LRDIDETSWKSLSGVRANKCILQLVPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHM 231
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+L A VC NA S L++ FF ++ W+WP PV+L G
Sbjct: 232 AILAAFVCGYESNATLSSLLANFFYIFAHWQWPTPVVLLEDTYPATG-----------AP 280
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 183
MPI P + N++ ST +M +F G+ + ++ W LFE Y +
Sbjct: 281 PGLMPIQLPCGSHQYCNSNITRSTFYKIMAEFLRGHNLTKDYLKPNFSWKNLFELYPYEN 340
Query: 184 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC 243
+Y + ++ + AAN +DL W GWV+SR R L IE + YG C P P EYV+T
Sbjct: 341 TYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLSKIE-EVYGI--CDPNPTEYVETYTKQ 397
Query: 244 AHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 302
+ F+ GLQ + V DI EF ++N F P I +S ++ Q+P
Sbjct: 398 PNIVFYWGLQLRTINVS------DIESVETEFLKNLNSGSFQGPVGRIQLSVVKESQLP 450
>gi|255556450|ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis]
gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative [Ricinus communis]
Length = 492
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 94/249 (37%), Positives = 142/249 (57%), Gaps = 11/249 (4%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L ++DE + +SL+G R +IL+ VPN+E+F + LRC+K WA+RRGV N+ GFLGGV+
Sbjct: 158 LMNIDETSWKSLSGVRANQRILQFVPNLENFQSMLRCIKLWARRRGVCGNLNGFLGGVHL 217
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+L A VCQ YPNA S L+S FF Y W WP PVML + G S P ++ +
Sbjct: 218 AILSAVVCQKYPNASVSALISNFFATYATWPWPTPVML------QDGMS--SPAEDFIET 269
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 183
MPI P P N++ ST + +F G+++ +++ W+ +FEP+ + +
Sbjct: 270 RSFMPIRLPCSPHEYCHSNITKSTYYRIRTEFLRGHSLTKDLLKPDFDWNGIFEPFPYSK 329
Query: 184 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC 243
Y ++++ + A + D++ W GWV+SR R L L +E + QC P P EY D
Sbjct: 330 KYTRFVKIYLSAPDQDEVGDWVGWVKSRFRALLLKLEG---LQGQCDPSPVEYADRDVSE 386
Query: 244 AHCAFFMGL 252
+ F+ GL
Sbjct: 387 PNVVFYWGL 395
>gi|294948940|ref|XP_002785971.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239900079|gb|EER17767.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 505
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 90/240 (37%), Positives = 138/240 (57%), Gaps = 17/240 (7%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
++ DV++ ++S+NG RVAD++L LV + + F R +K+WA++R +YSN G++GGV+
Sbjct: 198 LIYDVEKRCMKSMNGIRVADKMLSLVVDTQTFRLATRVIKYWAQQRLIYSNAIGYMGGVS 257
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA++V RVCQLYPN +V RFF VY W+W + G S R+ D
Sbjct: 258 WAVMVGRVCQLYPNYSAKQIVERFFFVYARWQW--------TATRDYGNSNVPLRRYTSD 309
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ---------WS 173
+ H MP+ITP +P N++YNV S RV++ + + G I E + +NK+ W+
Sbjct: 310 RHHVMPVITPIFPTHNTTYNVQESNKRVIVREIKRGREIMELMSMNKSSGATKGNEVTWA 369
Query: 174 ALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP 233
L P+ FF+ YR +L ++I A L +KG VESR+R L +E K+ P+P
Sbjct: 370 DLCAPFPFFQVYRQFLLLEISAETEKAFLKFKGLVESRIRVLVKNLETCCGHKVLPQPHP 429
>gi|397621901|gb|EJK66507.1| hypothetical protein THAOC_12570 [Thalassiosira oceanica]
Length = 756
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/336 (34%), Positives = 172/336 (51%), Gaps = 32/336 (9%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEH----FCTTLRCLKFWAKRRGVYSNVTGFL 58
VL+ VD T +SLNG RV + I LV E F T +R ++ WAK RG+YSN G+
Sbjct: 147 VLSGVDAATEKSLNGPRVTNLIAALVGGTEQRYQTFLTVVRLVRKWAKNRGLYSNKMGYW 206
Query: 59 GGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRK 118
GGVN + VA V QLYPNA P+ + +FF V+ WRWPNPVML +AELG VW+ +
Sbjct: 207 GGVNINMAVALVLQLYPNACPASALRKFFLVFKSWRWPNPVMLTRPHDAELGLQVWNSHQ 266
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP 178
+ P+ITPAYP MNS+ +VS TL+++ ++F G+ I ++ L++
Sbjct: 267 A-ANMRQVAPMITPAYPAMNSTLSVSRQTLQILHEEFCRGHGIVDK----------LYKD 315
Query: 179 YLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL-TLMIERDT-YGKLQCHPYPHEY 236
Y R ++ I D AW G+VESRLR+L + M+ R K+Q P +
Sbjct: 316 YQRGRD-RPGGRLCITGPTLHDAQAWAGFVESRLRKLVSDMLGRSLPLSKIQLWPKKFDV 374
Query: 237 --VDTSKPCAHC------AFFMGLQRKPGEVVQEGQQFDIRGSVEEF-KLSINMYMFWKP 287
D + H +F+G + ++ G+Q DI + F K + + P
Sbjct: 375 CCADKTALLTHAQRANSITYFIGF--RVDKLRMRGEQLDIERQLSNFRKFELGRFHPLVP 432
Query: 288 GMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQR 323
GM+I K++P F Y+ +LA+ +R
Sbjct: 433 GMDILPKSFGVKELPTICFDGTYEGG---KLAAMKR 465
>gi|294892267|ref|XP_002773978.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239879182|gb|EER05794.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 534
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/336 (34%), Positives = 169/336 (50%), Gaps = 43/336 (12%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE + RS+NG RV+D I VP+ HF LR ++ WA+RRG+YSN G+LGGV
Sbjct: 177 NLLCGMDEKSARSINGVRVSDAIKACVPHFAHFLGALRVIRAWARRRGIYSNALGYLGGV 236
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAEL----GF---SVW 114
+WA+LVARVCQL+PN PS LV RFFRVY+ W W + +E GF VW
Sbjct: 237 SWAILVARVCQLFPNMGPSQLVVRFFRVYSRWNWDPSEGAVVLRHSEQRNGEGFQHHKVW 296
Query: 115 DPRKNRRDKTHHMP-------IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE--V 165
P R +P +ITPAYP MNS++ V+ T+ + + + G I V
Sbjct: 297 CPPPKRTTTDQPLPLAASPMAVITPAYPSMNSTFGVTRMTMDTIKKELERGAGIISSKGV 356
Query: 166 ELNKAQ-WSALFEPYLFFE----SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLM-- 218
+L + W L EP FF+ Y+ +LQ++I A+ + +G V S+L+ L L
Sbjct: 357 DLRSRECWETLLEPIHFFDYDQGGYKQFLQIEIGGASELSHKSAEGLVNSKLKPLLLRKM 416
Query: 219 --IERDTYGKLQCHPYPHEYV--DTSKPCAHC-AFFMGLQRKPGEVVQEGQQFDIRGSVE 273
+ + K + D K +C A F+GL PG D+R +V
Sbjct: 417 PEVAPEDTNKAPYRAWTGAVALEDPYKEYPYCSALFVGLSIPPG--------MDLRPAVR 468
Query: 274 EF------KLSINMYMFWKPGM-EICVSHIRRKQIP 302
EF +L+ M + GM ++ V H+ +P
Sbjct: 469 EFMERLGIELATQMPEYKAGGMFDVRVRHVAGPSLP 504
>gi|123495483|ref|XP_001326753.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909672|gb|EAY14530.1| hypothetical protein TVAG_388620 [Trichomonas vaginalis G3]
Length = 494
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 163/309 (52%), Gaps = 7/309 (2%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L++VDE +VRSLNG RV D +L+LVPN + F LR L+ WAK+R VY NV G+LGGVN
Sbjct: 175 ILDNVDEESVRSLNGRRVNDMLLQLVPNQDIFRVVLRFLRIWAKKRCVYGNVFGYLGGVN 234
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
A+L A +CQ YP P+ ++ FF W WP P+ + S WDP + ++D
Sbjct: 235 LAILAAFICQRYPKKSPAYIIVMFFNDLATWTWPEPIYINTPTTGNR--SNWDPTR-QQD 291
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
MPIITPAYP +NS ++ + S+ M +F+ G + ++A W + + FF
Sbjct: 292 HKDCMPIITPAYPTINSLHSATKSSRNRMTVEFKRGFKVASACLKSEASWERIIDSPKFF 351
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY-VDTSK 241
+R +++V +VA + +V+SR+R L + IE + +P E+ + +
Sbjct: 352 VRHRKFVEVLVVATEEKVYTEFMKFVQSRVRFLAINIETQLRHVSHAYIWPVEFPANGYR 411
Query: 242 PCAHCA-FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 300
C+ F++GL + + + D+ +++ I P ++ + + K
Sbjct: 412 GNEFCSVFYIGLSYHVPKDENQSRTLDLTSPAKKWVDDIRQKA--PPNADVILDVVDTKD 469
Query: 301 IPPYVFPEG 309
+P ++FP G
Sbjct: 470 LPSFLFPNG 478
>gi|428168831|gb|EKX37771.1| hypothetical protein GUITHDRAFT_158559 [Guillardia theta CCMP2712]
Length = 338
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 112/178 (62%), Gaps = 3/178 (1%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +VD+ +V SLNG RV D I LVP ++ +R LK WAK+RGVY NV GFLGG++
Sbjct: 146 LKNVDQQSVTSLNGVRVTDTIRSLVPTMKTLKYCIRALKLWAKKRGVYKNVLGFLGGISL 205
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI--DEAELGFSVWD-PRKNR 120
++ AR+ QLYP A+PS L+ FF Y+ W+WP PV L + + +L VW
Sbjct: 206 EIMAARIGQLYPKALPSRLLYFFFFTYSQWKWPQPVGLTEVIANSHDLNLPVWGFGATEM 265
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP 178
D+ H MPIITP YP N++ NVS STL+VM ++F IC+++ A+WS LFEP
Sbjct: 266 SDRRHLMPIITPCYPAQNATANVSKSTLKVMQEEFTRAKDICKQILEGNAEWSDLFEP 323
>gi|294948934|ref|XP_002785968.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239900076|gb|EER17764.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 436
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 133/227 (58%), Gaps = 17/227 (7%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
++ DV++ ++S+NG RVAD++L LV + + F R +K+WA++R +YSN G++GGV+
Sbjct: 198 LIYDVEKRCMKSMNGIRVADKMLSLVVDTQTFRLATRVIKYWAQQRLIYSNAIGYMGGVS 257
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA++V RVCQLYPN +V RFF VY W+W + G S R+ D
Sbjct: 258 WAVMVGRVCQLYPNYSAKQIVERFFFVYARWQW--------TATRDYGNSNAPRRRYTSD 309
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ---------WS 173
+ H MP+ITP +P N++YNV S RV++ + + G I E + +NK+ W+
Sbjct: 310 RHHVMPVITPIFPTHNTTYNVQESNKRVIVREIKRGREIMELMSMNKSSGATKGNEVTWA 369
Query: 174 ALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE 220
L P+ FF+ YR +L ++I A L +KG VESR+R L +E
Sbjct: 370 DLCAPFPFFQVYRQFLLLEISAETEKAFLKFKGLVESRIRVLVKNLE 416
>gi|32527644|gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 483
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 155/299 (51%), Gaps = 20/299 (6%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L D+DE + +SL+G R IL+LVP++E F + LRC+K WAKRRGVY N+ GFLGGV+
Sbjct: 146 LRDIDETSWKSLSGVRANKCILQLVPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHM 205
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+L A VC PNA S L++ FF + +W+WP PV+L D +
Sbjct: 206 AILAAFVCGYQPNATLSSLLANFFYTFALWQWPTPVVLLE-----------DTYPSTGAP 254
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 183
MPI P + ++ ST ++ +F G+ + ++ W LFE Y +
Sbjct: 255 PGLMPIQLPCGSHQYCNSTITRSTFYKIVAEFLLGHNLTKDYLKLNFSWKDLFELYPYAN 314
Query: 184 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC 243
+Y + ++ + AAN +DL W GWV+SR R L + IE + YG C P P EYV+T
Sbjct: 315 TYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLIKIE-EVYGI--CDPNPTEYVETYTKQ 371
Query: 244 AHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 302
+ F+ GLQ + V DI +F ++N F I ++ ++ Q+P
Sbjct: 372 PNIVFYWGLQLRTINVS------DIESVKIDFLKNVNSGSFRGTVGRIQLTLVKASQLP 424
>gi|224099105|ref|XP_002311376.1| predicted protein [Populus trichocarpa]
gi|222851196|gb|EEE88743.1| predicted protein [Populus trichocarpa]
Length = 483
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 144/256 (56%), Gaps = 13/256 (5%)
Query: 1 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
+S+L ++DE + +SL+G R +IL LVPN+ +F + LRCLK WAKRRGVY N+ GFLGG
Sbjct: 143 LSLLTNIDETSWKSLSGVRANQRILLLVPNLMNFQSMLRCLKLWAKRRGVYGNLNGFLGG 202
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNR 120
V+ A+L A VCQ PNA L+S FF Y MW WP PVML + + +V D + R
Sbjct: 203 VHLAVLAAFVCQNQPNASVIALISNFFSTYAMWPWPTPVML----QDGMSSNVEDVIETR 258
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNK--AQWSALFEP 178
+MPI P P NV+ ST + +F G+++ ++ K + +FEP
Sbjct: 259 ----FYMPIRLPCSPYEYCHSNVTKSTFTKIRAEFLRGHSMTRDLLKLKLDSDVGRIFEP 314
Query: 179 YLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 238
+ + +Y ++++ + A + D+L W GWV+S R L L +E + C P P EYVD
Sbjct: 315 FPYSTNYTRFVKIYLSAPDQDELGDWVGWVKSHFRCLLLKLEA---VQGFCDPNPMEYVD 371
Query: 239 TSKPCAHCAFFMGLQR 254
+ F+ GL R
Sbjct: 372 MDASEPNVVFYWGLNR 387
>gi|387594343|gb|EIJ89367.1| poly(A) polymerase [Nematocida parisii ERTm3]
gi|387596813|gb|EIJ94434.1| poly(A) polymerase [Nematocida parisii ERTm1]
Length = 506
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 156/300 (52%), Gaps = 21/300 (7%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L + E + SLNG RV D+IL VPN+ F TLR +K+WA++R VY + G++GGV
Sbjct: 161 LLKHMSEKCILSLNGNRVTDEILAQVPNISTFHKTLRFIKYWAQKRQVYGHSYGYMGGVA 220
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
+AL VA+VCQLYP A + +FF V++ W WP PV++ + + VW+P+ N +
Sbjct: 221 YALCVAKVCQLYPGADAFETIEKFFDVFSKWPWPQPVIIKEVPDCNYNLKVWNPKINPQH 280
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNK---AQWSALFEPY 179
K MP+ITP YP + S++N++ STL V +F G I E K L E
Sbjct: 281 KNDKMPVITPVYPPLCSTHNITNSTLFVAKKEFLRGVAIFSENADKKDPMKILDQLCEDA 340
Query: 180 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV-- 237
FF ++ Y + + N + + G+ E+R+R +E + + +P +Y+
Sbjct: 341 DFFTRHKTYFMIALACDNPKEFSRFMGFAETRVRMFAQKLE-NIENIEYAYTFPKKYILE 399
Query: 238 -DTSK--------PC-----AHCAFFMGLQRKPGEV-VQEGQQFDIRGSVEEFKLSINMY 282
TSK C A AFF+G+ ++ + ++ +++ V EFK S+ Y
Sbjct: 400 DVTSKNVPLLKELKCGDDSYAFGAFFIGIDFSTVKLPLNASKKMNLKKPVLEFKSSLETY 459
>gi|348667211|gb|EGZ07037.1| hypothetical protein PHYSODRAFT_307061 [Phytophthora sojae]
Length = 1061
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 181/371 (48%), Gaps = 65/371 (17%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L V E ++++LN RV+ +L LVP + LR ++ WA+RRG+YS G+LGG++
Sbjct: 617 MLVGVHETSMKALNAPRVSSMLLCLVPRRREYRIVLRAVRAWARRRGIYSAKLGYLGGIS 676
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVA VCQLYPNA P+ + RFF+V + W+WP PVML I +A LGF +WDPR++ D
Sbjct: 677 WAILVAFVCQLYPNAEPAKIFVRFFQVLSEWQWPQPVMLNMIYDAGLGFDMWDPRQSVFD 736
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICE------------------- 163
++H MPIITPAYP MNSS VS T V+ ++ + E
Sbjct: 737 RSHIMPIITPAYPHMNSSVQVSQPTFSVIYEELWRARYLAEIAVGISKPFPTAAPSPESS 796
Query: 164 EVELNKA-----------------------------------QWSALFEPYLFFESYRNY 188
E +L A W LF+P FF Y +Y
Sbjct: 797 EADLKAAVVCMATSMPSFDQPLNAVDSTEGVVQTTQGFGEGSAWDKLFQPSNFFIRYSSY 856
Query: 189 LQVDIVAANADDLLAWKGWVESRLRQLTLMIER-DTYGKLQCHP--YPHEYVDTSKPCAH 245
+ + AA+ + W +V+SRLR+L + ++ P +PH D +
Sbjct: 857 MVFNFQAASESAMHKWGKFVQSRLRKLVDNLHHMSPVSRVHAFPRYFPHT-CDAERRGPG 915
Query: 246 CAFFMGLQ--RKPGEVVQEGQQFDIRGSVEE---FKLSINMYMF--WKPGMEICVSHIRR 298
F+G++ + + +Q +++ ++E+ F L+ ++ +P M +
Sbjct: 916 SCMFIGIEFHYRRHQTIQPKDDPEVKKTLEQAIRFFLATDLQQMEDKQPDMTADAKVLSW 975
Query: 299 KQIPPYVFPEG 309
+++P +VF G
Sbjct: 976 EELPEFVFRLG 986
>gi|358332465|dbj|GAA51116.1| poly(A) polymerase, partial [Clonorchis sinensis]
Length = 1210
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 108/156 (69%), Gaps = 8/156 (5%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
++ ++DE VRS+NG RV + IL LV N F L+ ++FWAKRR +YSN GFLGGV+
Sbjct: 1055 LMRNMDEHDVRSINGVRVNEDILNLVYNKNSFKVALKVIRFWAKRRNIYSNTLGFLGGVS 1114
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE----LGFSVWDPRK 118
WA+LV+R+CQLYP A PSMLV FF++++ W WP PV L E+E L VWDPR
Sbjct: 1115 WAILVSRICQLYPYASPSMLVYLFFKIFSQWPWPKPVRL---RESEYIPSLCLPVWDPRL 1171
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQ 154
N D+ H MPI+TP+YP NS+YNV S R+++++
Sbjct: 1172 NLMDQYHLMPILTPSYPSQNSAYNVQRSN-RIILER 1206
>gi|145338191|ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana]
gi|62320636|dbj|BAD95301.1| poly(A) polymerase [Arabidopsis thaliana]
gi|332640894|gb|AEE74415.1| poly(A) polymerase 3 [Arabidopsis thaliana]
Length = 507
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 153/299 (51%), Gaps = 20/299 (6%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L D+DE + + L+G R IL+LVP++E F + LRC+K WAKRRGVY N+ GFLGGV+
Sbjct: 170 LRDIDETSWKILSGVRANKCILQLVPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHM 229
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+L A VC PNA S L++ FF + W+WP PV+L D +
Sbjct: 230 AILAAFVCGYQPNATLSSLLANFFYTFAHWQWPTPVVLLE-----------DTYPSTGAP 278
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 183
MPI P + ++ ST ++ +F G+ + ++ W LFE Y +
Sbjct: 279 PGLMPIQLPCGSHQYCNSTITRSTFYKIVAEFLLGHNLTKDYLKLNFSWKDLFELYPYAN 338
Query: 184 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC 243
+Y + ++ + AAN +DL W GWV+SR R L + IE + YG C P P EYV+T
Sbjct: 339 TYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLIKIE-EVYGI--CDPNPTEYVETYTKQ 395
Query: 244 AHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 302
+ F+ GLQ + V DI +F ++N F I ++ ++ Q+P
Sbjct: 396 PNIVFYWGLQLRTINVS------DIESVKIDFLKNVNSGSFRGTVGRIQLTLVKASQLP 448
>gi|401418000|ref|XP_003873492.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489722|emb|CBZ24982.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 706
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 141/264 (53%), Gaps = 29/264 (10%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +V S N RVA I+ LVPN F TLR +K W K R +YSN GF G+
Sbjct: 176 LLQGLDEQSVLSCNAVRVAHNIMDLVPNKAVFRQTLRFVKAWGKARSIYSNTFGFPSGIG 235
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA-----------ELGF 111
WA+L A VCQ YPN + +++RFFR Y W PNP + A LG
Sbjct: 236 WAILTAFVCQCYPNQNAAGMITRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGR 295
Query: 112 SVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYG-NTICEEVELNKA 170
WDPR+++ D P++TPA P N+ YNV+ + LR + D+FQ G + + +++ ++ A
Sbjct: 296 G-WDPRESKSDAMALFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAA 354
Query: 171 Q----------WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL----- 215
+ WS + EP FF +++YLQ+ + ++A+ A+ VESR+R L
Sbjct: 355 EAKAKFGPFGVWSRVLEPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRILWAGNA 414
Query: 216 -TLMIERDTYGKLQCHPYPHEYVD 238
+ + Y +L+ H PH + D
Sbjct: 415 SSRGHTLEDYRQLRLHLNPHRFED 438
>gi|12322673|gb|AAG51325.1|AC020580_5 poly(A) polymerase, putative; 41591-39333 [Arabidopsis thaliana]
Length = 482
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 153/299 (51%), Gaps = 20/299 (6%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L D+DE + + L+G R IL+LVP++E F + LRC+K WAKRRGVY N+ GFLGGV+
Sbjct: 145 LRDIDETSWKILSGVRANKCILQLVPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHM 204
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+L A VC PNA S L++ FF + W+WP PV+L D +
Sbjct: 205 AILAAFVCGYQPNATLSSLLANFFYTFAHWQWPTPVVLLE-----------DTYPSTGAP 253
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 183
MPI P + ++ ST ++ +F G+ + ++ W LFE Y +
Sbjct: 254 PGLMPIQLPCGSHQYCNSTITRSTFYKIVAEFLLGHNLTKDYLKLNFSWKDLFELYPYAN 313
Query: 184 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC 243
+Y + ++ + AAN +DL W GWV+SR R L + IE + YG C P P EYV+T
Sbjct: 314 TYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLIKIE-EVYGI--CDPNPTEYVETYTKQ 370
Query: 244 AHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 302
+ F+ GLQ + V DI +F ++N F I ++ ++ Q+P
Sbjct: 371 PNIVFYWGLQLRTINVS------DIESVKIDFLKNVNSGSFRGTVGRIQLTLVKASQLP 423
>gi|384485221|gb|EIE77401.1| hypothetical protein RO3G_02105 [Rhizopus delemar RA 99-880]
Length = 472
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 106/149 (71%), Gaps = 9/149 (6%)
Query: 7 VDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 66
++E VRS++G RV ++IL+LVP+V F +LR +K WAK+RG+YSNV GFLGGV WA+L
Sbjct: 173 LEEKCVRSVSGPRVTNEILRLVPSVSVFRESLRTIKLWAKKRGIYSNVMGFLGGVAWAML 232
Query: 67 VARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH 126
VARVCQ+YPNA + +VSRFF + + W WP PV+L ++E + + DK H
Sbjct: 233 VARVCQMYPNACTASIVSRFFHIMSKWEWPQPVLLKPMEEGPIYPA---------DKAHR 283
Query: 127 MPIITPAYPCMNSSYNVSTSTLRVMMDQF 155
MPIITP +P M +++NV+ ST +MM++F
Sbjct: 284 MPIITPGFPSMCATHNVTNSTRSIMMNEF 312
>gi|219124076|ref|XP_002182338.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406299|gb|EEC46239.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 777
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 164/343 (47%), Gaps = 48/343 (13%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNV--EHFCTTLRCLKFWAKRRGVYSNVTGFLG 59
S L D D VRSLNG RV +L LV V E F L +K WA+ +GVYSNV GF G
Sbjct: 316 SDLCDQDPAGVRSLNGARVTQTLLDLVIPVGLERFQMVLLMVKAWARAQGVYSNVLGFWG 375
Query: 60 GVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAEL-----GFSV- 113
GVNWA+LVA VC+ YP + + V FF + W+WP PV L +++A + G +V
Sbjct: 376 GVNWAILVAYVCRAYPESSIADTVQLFFETFANWKWPTPVSLIDLNDASITTPPPGAAVL 435
Query: 114 --WDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQY-GNTICEEVELN-- 168
W+P + RD H PI+TPAYP MNSSYNV+ LR M + QY + I V+ +
Sbjct: 436 PSWNPAIHIRDGLHVCPILTPAYPVMNSSYNVALPQLRRMTEALQYTAHKIARWVDRSHT 495
Query: 169 ----------KAQWSALFE---PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 215
K W L+ ++F +++Y+ I A + + W VESRLR L
Sbjct: 496 TYNRGVPVRRKIPWHRLWSLNAGWVF--RHQHYVHATIRAPQGEAFVTWFRLVESRLRVL 553
Query: 216 TLMIERDTYGKLQCHPYPH-EYVDTSKPCA---------HCAFFMGLQRKPGEVVQEGQQ 265
+E H +PH + + P A FF+GL+
Sbjct: 554 ISSLETP-----DSHAWPHGRFFYRNVPIAPYDELNGLREAHFFIGLR-----FASHVDT 603
Query: 266 FDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPE 308
D+R +F +N ++ M++ + H+ +P +V E
Sbjct: 604 ADVRTLTLDFLRQVNGWIGRDSSMDLSLGHVTLPNLPRFVLDE 646
>gi|326437024|gb|EGD82594.1| hypothetical protein PTSG_03248 [Salpingoeca sp. ATCC 50818]
Length = 840
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 163/337 (48%), Gaps = 43/337 (12%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNV-EHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
+L ++ E VRS+NG RV D+IL+L P E F LR +K WAKRRG+Y N ++GGV
Sbjct: 169 ILRNLPETCVRSINGRRVTDKILELCPAAREDFGLCLRTIKLWAKRRGIYGNALCYVGGV 228
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFS---VWDPRK 118
+ A+LVA++CQL+P A S LV +FF Y W W PV L ++ +LG + W P
Sbjct: 229 HLAILVAKICQLFPYATASTLVEKFFWHYKRWDWAIPVELQHVE--DLGITHIPHWSPIN 286
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP 178
N D + M I+TP YP N+SY V+ STL + + ++ +++ KA W L++
Sbjct: 287 NYHDMS-VMKILTPVYPSQNASYTVTRSTLYRIKRELDRAESVVQKIADGKATWPRLWKQ 345
Query: 179 YLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMI------------------- 219
FF Y +Y+ V + + D ++G VES +R L +
Sbjct: 346 IPFFGVYSHYICVQALTNSEQDRTLYEGLVESTVRNLVTSLEFHPAVTYAIPIPKAFRRS 405
Query: 220 -ERD--TYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFK 276
E+D T H P EY C +F+GL P + +Q DI + +F+
Sbjct: 406 PEKDPSTLEDEDTHERPPEY------CWRTLWFIGLVFDP----KATEQLDILTVMSDFE 455
Query: 277 LSINM----YMFWKPGMEICVSHIRRKQIPPYVFPEG 309
+ + P M V + R +IP ++ E
Sbjct: 456 RRVRFKESRMTRYDPSMRYTVDPMARDEIPTWLHAEA 492
>gi|428177975|gb|EKX46852.1| hypothetical protein GUITHDRAFT_94125 [Guillardia theta CCMP2712]
Length = 613
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 148/264 (56%), Gaps = 20/264 (7%)
Query: 8 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 67
D + LNG RV ++L+ VPN+E+F LR +K WA+RR +YSN+ GF GGV W ++
Sbjct: 200 DTKDITCLNGPRVTYELLQRVPNIENFKVLLRAIKLWARRREIYSNIIGFPGGVAWGIMA 259
Query: 68 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-------LGFSVWDPRKNR 120
A+V QLYP PS+L+ +FF +Y W++ + +++ +E + WDP ++
Sbjct: 260 AQVAQLYPKMCPSLLLEKFFFLYKHWKFEDAIIVAPPEECQAPDGQERYNLHSWDPTRHH 319
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
+ + +ITP YP NS++N++ S L V+ ++ N++ + + ++ ++ LFEP +
Sbjct: 320 FSR-RPLTVITPTYPMANSTFNITDSALNVIRNEISRANSLTQGLAQGESSYNDLFEPAM 378
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCH-------PYP 233
FF+ Y ++Q++++ + + A+ G+VES++R+L + G H P P
Sbjct: 379 FFKQYGTFVQIEVLGSE-KHIEAFSGYVESQIRKLVEKLTTSQLGLYIVHPCTRHFGPIP 437
Query: 234 HEYVDTSK----PCAHCAFFMGLQ 253
E++ P + F++GL+
Sbjct: 438 AEHLGGGDPEDGPWQNIFFYLGLK 461
>gi|146081651|ref|XP_001464305.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|398012599|ref|XP_003859493.1| poly(A) polymerase, putative [Leishmania donovani]
gi|134068396|emb|CAM66686.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|322497708|emb|CBZ32784.1| poly(A) polymerase, putative [Leishmania donovani]
Length = 709
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 141/268 (52%), Gaps = 37/268 (13%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +V S N RVA I+ LVPN F TLR +K W K R +YSN GF G+
Sbjct: 176 LLQGLDEQSVLSCNAVRVAHNIMDLVPNKAVFRQTLRFVKAWGKARSIYSNTFGFPSGIG 235
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA-----------ELGF 111
WA+L A VCQ YPN + +V+RFFR Y W PNP + A LG
Sbjct: 236 WAILTAFVCQCYPNQNAAGMVTRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGR 295
Query: 112 SVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYG-NTICEEVELNKA 170
WDPR+++ D P++TPA P N+ YNV+ + LR + D+FQ G + + +++ ++ A
Sbjct: 296 G-WDPRESKSDAMALFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAA 354
Query: 171 Q----------WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL----- 215
+ WS + EP FF +++YLQ+ + ++A+ A+ VESR+R L
Sbjct: 355 EAKAKFGPFGVWSRVLEPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRILWAGNA 414
Query: 216 -----TLMIERDTYGKLQCHPYPHEYVD 238
TL + Y +L+ H P + D
Sbjct: 415 SSRGHTL----EDYRQLRLHLNPRRFED 438
>gi|357112525|ref|XP_003558059.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 537
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 145/270 (53%), Gaps = 14/270 (5%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L VD + R L+G RV QI++LVPN++ F LRCLK WA++RG+Y ++ G+ G++
Sbjct: 224 LLEKVDGASWRCLSGVRVNRQIMQLVPNMKRFQVLLRCLKLWARKRGIYCHLVGYFAGIH 283
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
A+L A VC+ +PNA + L S FF +++ W WP PV L D+A L W P D
Sbjct: 284 LAVLGAYVCRRHPNASVNTLFSMFFDIFSHWPWPLPVALH--DQAPL----WGP-----D 332
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
MPI+ P +P + +++ ST + ++ + G + +++ W+ +F PY +
Sbjct: 333 GCSLMPIVMPCFPPEFCASSITKSTFNKIKEELRRGFALTKDIRNVDIDWTWIFAPYPYT 392
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 242
Y ++L + + A ++L W GWV+SR R L L +E + C P P E V+ +
Sbjct: 393 VKYEHFLHMVLSAPTTEELRDWVGWVKSRFRNLILKLES---LDVDCDPDPSEKVNHTIA 449
Query: 243 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSV 272
+ FF GL + ++ + D SV
Sbjct: 450 APNVVFFWGLIYRSTKISASSLKNDFMKSV 479
>gi|157866653|ref|XP_001687718.1| putative polynucleotide adenylyltransferase [Leishmania major
strain Friedlin]
gi|68125332|emb|CAJ03188.1| putative polynucleotide adenylyltransferase [Leishmania major
strain Friedlin]
Length = 700
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 141/268 (52%), Gaps = 37/268 (13%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +V S N RVA I+ LVPN F TLR +K W K R +YSN GF G+
Sbjct: 176 LLQGLDEQSVLSCNAVRVAHNIMDLVPNKAVFRQTLRFVKAWGKARSIYSNTFGFPSGIG 235
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA-----------ELGF 111
WA+L A VCQ YPN + +V+RFFR Y W PNP + A LG
Sbjct: 236 WAILTAFVCQCYPNQNAAGMVTRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGR 295
Query: 112 SVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYG-NTICEEVELNKA 170
WDPR+++ D P++TPA P N+ YNV+ + LR + D+FQ G + + +++ ++ A
Sbjct: 296 G-WDPRESKSDAMALFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAA 354
Query: 171 Q----------WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL----- 215
+ WS + EP FF +++YLQ+ + ++A+ A+ VESR+R L
Sbjct: 355 EAKAKFGPFGVWSRVLEPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRILWAGNA 414
Query: 216 -----TLMIERDTYGKLQCHPYPHEYVD 238
TL + Y +L+ H P + D
Sbjct: 415 SSRGHTL----EDYRQLRLHLNPRRFED 438
>gi|170061473|ref|XP_001866247.1| poly a polymerase [Culex quinquefasciatus]
gi|167879711|gb|EDS43094.1| poly a polymerase [Culex quinquefasciatus]
Length = 554
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 126/219 (57%), Gaps = 27/219 (12%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D VRSLNGCR D+IL+ VPN+++F L+ G+YSN G+ GGV+
Sbjct: 345 LLKNLDPKLVRSLNGCRATDEILRPVPNIDNFRLALQ--------HGIYSNSLGYFGGVS 396
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR CQL N V + V + F V++ W+ LGF +WDPR N +
Sbjct: 397 WAMLVARTCQLL-NVVAATQVHKCFLVFSRWKL----------RQNLGFQLWDPRVNVQG 445
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H M IITPAYP NS+++VS ST +VM+++F G I +E+ L+KA W L
Sbjct: 446 QFHLMSIITPAYPQQNSTFHVSRSTRKVMLNEFNRGMQITDEIMLDKAGWDKLIATL--- 502
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 221
SY + + N DD L W G VES++R L +ER
Sbjct: 503 -SYSTL----VTSNNTDDHLEWCGLVESKIRYLIQNLER 536
>gi|72391414|ref|XP_846001.1| poly(A) polymerase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175902|gb|AAX70026.1| poly(A) polymerase, putative [Trypanosoma brucei]
gi|70802537|gb|AAZ12442.1| poly(A) polymerase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 687
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 123/234 (52%), Gaps = 21/234 (8%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D+ +V S N RVA I+ LVP+ F LR +K W K RG+YSN GF G+
Sbjct: 173 LLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIG 232
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNP---------VMLCAIDEAELGFSV 113
WA+LVA VCQ +PN + +V RFFR+Y W PNP + L +
Sbjct: 233 WAILVAFVCQCHPNQNAAGMVVRFFRIYHTWFSPNPHGSGRENRAIYLTETMRVKTNLGR 292
Query: 114 -WDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE-----VEL 167
WDPR+++ D P++TPA P N+ YNV+ + LR + D+F G+ IC VE
Sbjct: 293 GWDPRESKSDALALFPVLTPAVPYGNACYNVTMTNLRQLCDEFARGHEICSSYIGMGVEE 352
Query: 168 NKAQ------WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 215
K + WS + EP FF Y+ YL V + +A+ + VES++R L
Sbjct: 353 TKMKLGPHGIWSKILEPVKFFGEYKYYLHVQVTCTDAEAYQGYVDAVESKIRFL 406
>gi|357115984|ref|XP_003559765.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 554
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 135/238 (56%), Gaps = 20/238 (8%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +D + RSL+G RV +QI++LVPN + F LR +K WA+RRG++ ++ GF G++
Sbjct: 242 LRRLDSRSWRSLSGVRVNEQIVQLVPNAKKFQVLLRSIKLWARRRGLHCHLLGFFAGIHL 301
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+L A +CQ YPNA + L + FF ++ W W PV L P +R
Sbjct: 302 AILAAYICQRYPNATANGLFTMFFEIFAHWDWQIPVNLHG-----------QPTNCKRSD 350
Query: 124 THHMPIITPAYP---CMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
++MPI+ P P CM+ N++ T + + ++ G + +++ + +W+ LF P+
Sbjct: 351 GYYMPIVMPCTPPELCMS---NMTKCTFKKIREELMRGYALTKDLWRHDFEWTWLFAPFP 407
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 238
+ Y+ +L++ + + +++L W GWV+SR RQL L +ER+ L+C PY E VD
Sbjct: 408 YATRYQQFLRIALCSPTSEELRDWTGWVKSRFRQLILKLERN---GLECDPYSSEEVD 462
>gi|261329513|emb|CBH12495.1| poly(A) polymerase, putative [Trypanosoma brucei gambiense DAL972]
Length = 687
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 122/234 (52%), Gaps = 21/234 (8%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D+ +V S N RVA I+ L P+ F LR +K W K RG+YSN GF G+
Sbjct: 173 LLQGLDDQSVLSCNAVRVAHNIMDLAPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIG 232
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNP---------VMLCAIDEAELGFSV 113
WA+LVA VCQ +PN + +V RFFR+Y W PNP + L +
Sbjct: 233 WAILVAFVCQCHPNQNAAGMVVRFFRIYHTWFSPNPHGSGRENRAIYLTETMRVKTNLGR 292
Query: 114 -WDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE-----VEL 167
WDPR+++ D P++TPA P N+ YNV+ + LR + D+F G+ IC VE
Sbjct: 293 GWDPRESKSDALALFPVLTPAVPYGNACYNVTMTNLRQLCDEFARGHEICSSYIGMGVEE 352
Query: 168 NKAQ------WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 215
K + WS + EP FF Y+ YL V + +A+ + VES++R L
Sbjct: 353 TKMKLGPHGIWSKILEPVKFFGEYKYYLHVQVTCTDAEAYQGYVDAVESKIRFL 406
>gi|154334339|ref|XP_001563421.1| putative polynucleotide adenylyltransferase [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134060437|emb|CAM37605.1| putative polynucleotide adenylyltransferase [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 709
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 137/268 (51%), Gaps = 37/268 (13%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +V S N RVA I+ LVPN F LR +K W K R +YSN GF G+
Sbjct: 176 LLQGLDEQSVLSCNAVRVAHNIMDLVPNKAVFRQALRFVKAWGKARSIYSNTFGFPSGIG 235
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA-----------ELGF 111
WA+L A VCQ YPN + +++RFFR Y W PNP + A LG
Sbjct: 236 WAILTAFVCQCYPNQNAAGMITRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGR 295
Query: 112 SVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYG-NTICEEVELNKA 170
WDPR+++ D P++TPA P N+ YNV+ + LR + D+FQ G + + ++ ++
Sbjct: 296 G-WDPRESKSDAMALFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSNDLGMSAV 354
Query: 171 Q----------WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL----- 215
+ WS + EP FF +R+YL + + ++A+ A+ VESR+R L
Sbjct: 355 EAEAKFGPFGVWSRVLEPAPFFGKFRHYLHIKVSCSDAEHYQAYADGVESRIRILWAGNA 414
Query: 216 -----TLMIERDTYGKLQCHPYPHEYVD 238
TL + Y +L+ H P + D
Sbjct: 415 SSRGHTL----EDYRQLRLHLNPRRFED 438
>gi|222624807|gb|EEE58939.1| hypothetical protein OsJ_10608 [Oryza sativa Japonica Group]
Length = 519
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 153/300 (51%), Gaps = 23/300 (7%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L V+EP+ R L+G RV QI++L+PN++ F LRCLK WA++RG++ ++ GF G++
Sbjct: 203 LLAAVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIH 262
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
A+L A VC ++P+A S L + FF +++ W WP PV L +D+ P R
Sbjct: 263 LAILAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVSL--LDQ---------PTPWRPH 311
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
MPI+ P P + +++ ST + ++ Q G + + W+ LF P+ +
Sbjct: 312 CCSFMPIVMPCSPPEFCASSITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYT 371
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 242
Y+++L++ + A A++L W GWV+SR R L L +E + G + C P P E D S
Sbjct: 372 VRYKHFLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLE--SIG-VDCDPDPSEQADHSMI 428
Query: 243 CAHCAFFMGLQRKPG---------EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 293
+ FF GL + E + DI G + I M + W + CV
Sbjct: 429 EPNVVFFWGLMYRTSTNICIDSVKEDFMKSVTNDIYGKEKCTHSDITMSIVWPTHLPKCV 488
>gi|215768734|dbj|BAH00963.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 546
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 153/300 (51%), Gaps = 23/300 (7%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L V+EP+ R L+G RV QI++L+PN++ F LRCLK WA++RG++ ++ GF G++
Sbjct: 230 LLAAVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIH 289
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
A+L A VC ++P+A S L + FF +++ W WP PV L +D+ P R
Sbjct: 290 LAILAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVSL--LDQ---------PTPWRPH 338
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
MPI+ P P + +++ ST + ++ Q G + + W+ LF P+ +
Sbjct: 339 CCSFMPIVMPCSPPEFCASSITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYT 398
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 242
Y+++L++ + A A++L W GWV+SR R L L +E + G + C P P E D S
Sbjct: 399 VRYKHFLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLE--SIG-VDCDPDPSEQADHSMI 455
Query: 243 CAHCAFFMGLQRKPG---------EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 293
+ FF GL + E + DI G + I M + W + CV
Sbjct: 456 EPNVVFFWGLMYRTSTNICIDSVKEDFMKSVTNDIYGKEKCTHSDITMSIVWPTHLPKCV 515
>gi|295664146|ref|XP_002792625.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278739|gb|EEH34305.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 590
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 125/235 (53%), Gaps = 35/235 (14%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +R +NG RV D+IL+LVP + F LR +K WA+RR +YSN+ GF GGV
Sbjct: 181 LLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVAR I+E L VW+P+ D
Sbjct: 241 WAMLVAR---------------------------------PIEEGPLQMKVWNPKIYHGD 267
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
+ H MPIITPAYP M +++NVS ST V++ + + G I +++ L + W+ LF + FF
Sbjct: 268 RYHLMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIVDKIFLGQLTWNDLFTRHTFF 327
Query: 183 -ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
+ Y+ YL + + + W G VES+LR L ++R + ++ HP+P +
Sbjct: 328 SQDYKYYLSITSSSRGKEAQSVWSGLVESKLRHLVGALDRKSSIEV-AHPFPKGF 381
>gi|218192685|gb|EEC75112.1| hypothetical protein OsI_11288 [Oryza sativa Indica Group]
Length = 519
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 152/300 (50%), Gaps = 23/300 (7%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L V+EP+ R L+G RV QI++L+PN++ F LRCLK WA++RG++ ++ GF G++
Sbjct: 203 LLAVVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIH 262
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
A+L A VC ++P+A S L + FF +++ W WP PV L D+ P R
Sbjct: 263 LAILAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVSL--FDQ---------PTPWRPH 311
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
MPI+ P P + +++ ST + ++ Q G + + W+ LF P+ +
Sbjct: 312 CCSFMPIVMPCSPPEFCASSITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYT 371
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 242
Y+++L++ + A A++L W GWV+SR R L L +E + G + C P P E D S
Sbjct: 372 VRYKHFLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLE--SIG-VDCDPDPSEQADHSMI 428
Query: 243 CAHCAFFMGLQRKPG---------EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 293
+ FF GL + E + DI G + I M + W + CV
Sbjct: 429 EPNVVFFWGLMYRTSTNICIDSVKEDFMKSVTNDIYGKEKCTHSDITMSIVWPTHLPKCV 488
>gi|6473835|dbj|BAA87187.1| PolyA polymerase [Schizosaccharomyces pombe]
Length = 204
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 107/172 (62%), Gaps = 1/172 (0%)
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNR 120
V WA++VAR+CQLYPNAV S++V++FFR+ W WP P++L I++ L +W+P+
Sbjct: 1 VAWAMMVARICQLYPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYP 60
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
DK H MPIITPAYP M +++N++ ST +++ + I +++ + WSALF+ +
Sbjct: 61 SDKAHRMPIITPAYPSMCATHNITLSTQTIILREMVRAGEIADQIMVKALPWSALFQKHD 120
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
FF Y++YL + A A+ L W G VES+LR L +E L HP+
Sbjct: 121 FFHRYKHYLTITAAAKTAEAQLKWAGLVESKLRHLVTRLELVDAIAL-AHPF 171
>gi|297722067|ref|NP_001173397.1| Os03g0313200 [Oryza sativa Japonica Group]
gi|255674459|dbj|BAH92125.1| Os03g0313200 [Oryza sativa Japonica Group]
Length = 431
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 153/300 (51%), Gaps = 23/300 (7%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L V+EP+ R L+G RV QI++L+PN++ F LRCLK WA++RG++ ++ GF G++
Sbjct: 115 LLAAVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIH 174
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
A+L A VC ++P+A S L + FF +++ W WP PV L +D+ P R
Sbjct: 175 LAILAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVSL--LDQ---------PTPWRPH 223
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
MPI+ P P + +++ ST + ++ Q G + + W+ LF P+ +
Sbjct: 224 CCSFMPIVMPCSPPEFCASSITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYT 283
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 242
Y+++L++ + A A++L W GWV+SR R L L +E + G + C P P E D S
Sbjct: 284 VRYKHFLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLE--SIG-VDCDPDPSEQADHSMI 340
Query: 243 CAHCAFFMGLQRKPG---------EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 293
+ FF GL + E + DI G + I M + W + CV
Sbjct: 341 EPNVVFFWGLMYRTSTNICIDSVKEDFMKSVTNDIYGKEKCTHSDITMSIVWPTHLPKCV 400
>gi|440789895|gb|ELR11186.1| Poly(A) polymerase central domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1230
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 138/255 (54%), Gaps = 39/255 (15%)
Query: 9 EPTV-RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 67
EP V RS++GCR D IL+ VPNV HF T LR +K WAKRRG+YSN GFLGG +W++LV
Sbjct: 875 EPAVLRSISGCRDGDAILRSVPNVSHFQTVLRAVKLWAKRRGLYSNAVGFLGGFSWSVLV 934
Query: 68 ARVC---QLYPN-----------AVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSV 113
A VC +LY ++ L++ FF VY W W PV + G +
Sbjct: 935 AYVCKNSKLYAKSAAAASGDGDLSIEERLLAEFFEVYNHWDWQQPVAITP------GSAR 988
Query: 114 WDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELN-KAQW 172
+ P K+ MPI+TP P NS+ NV+ STL M +F I + + N +A
Sbjct: 989 YKPGH----KSDKMPIVTPTPPFNNSARNVARSTLTEMQQEFFRAFDITQASQWNSEAGL 1044
Query: 173 SALFEPYLFFESYRNYLQVDIVAANADDLLAWK-------GWVESRLRQLTLMIERD--T 223
+ L +P FF+ Y YL V++ + ++D++ W GW+ESRL L +E++ T
Sbjct: 1045 NDLLQPTNFFKDYHYYLMVEVHSLSSDEVTKWPTNFSLSLGWLESRLIALIFDLEKNPQT 1104
Query: 224 YGKLQCHPYPHEYVD 238
Y + P+P +V+
Sbjct: 1105 YAR----PFPGTFVN 1115
>gi|58220771|gb|AAW68017.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 431
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 153/300 (51%), Gaps = 23/300 (7%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L V+EP+ R L+G RV QI++L+PN++ F LRCLK WA++RG++ ++ GF G++
Sbjct: 115 LLAVVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIH 174
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
A+L A VC ++P+A S L + FF +++ W WP PV L +D+ P R
Sbjct: 175 LAILAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVSL--LDQ---------PTPWRPH 223
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
MPI+ P P + +++ ST + ++ Q G + + W+ LF P+ +
Sbjct: 224 CCSFMPIVMPCSPPEFCASSITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYT 283
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 242
Y+++L++ + A A++L W GWV+SR R L L +E + G + C P P E D S
Sbjct: 284 VRYKHFLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLE--SIG-VDCDPDPSEQADHSMI 340
Query: 243 CAHCAFFMGLQRKPG---------EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 293
+ FF GL + E + DI G + I M + W + CV
Sbjct: 341 EPNVVFFWGLMYRTSTNICIDSVKEDFMKSVTNDIYGKEKCTHSDITMSIVWPTHLPKCV 400
>gi|187469283|gb|AAI67010.1| Papola protein [Rattus norvegicus]
Length = 317
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 85/113 (75%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA
Sbjct: 191 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWA 250
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 117
+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR
Sbjct: 251 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|55726267|emb|CAH89905.1| hypothetical protein [Pongo abelii]
Length = 304
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 85/113 (75%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA
Sbjct: 191 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWA 250
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 117
+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR
Sbjct: 251 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|119602052|gb|EAW81646.1| poly(A) polymerase alpha, isoform CRA_d [Homo sapiens]
Length = 317
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 85/113 (75%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA
Sbjct: 191 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWA 250
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 117
+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR
Sbjct: 251 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|342182011|emb|CCC91490.1| putative poly(A) polymerase [Trypanosoma congolense IL3000]
Length = 677
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 133/261 (50%), Gaps = 27/261 (10%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D+ +V S N RVA I+ LVP+ F LR +K W K RG+YSN GF G+
Sbjct: 173 LLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIG 232
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNP---------VMLCAIDEAELGFS- 112
WA+LVA VCQ +PN + +V RFFR+Y W PNP + L +
Sbjct: 233 WAILVAFVCQCHPNQNAAGMVVRFFRIYHAWFSPNPQGSGKENRAIYLTETMRVKTNLGR 292
Query: 113 VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE---VELNK 169
WDPR+++ D P++TPA P N+ +NV+ + LR + +F G+ IC + +N+
Sbjct: 293 CWDPRESKSDALALFPVLTPAVPYGNACFNVTMTNLRQLCAEFSRGHNICSSCIGMNVNE 352
Query: 170 AQ--------WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL------ 215
+ WS + EP FF Y+ Y+ V + ++A+ + VES++R L
Sbjct: 353 TKEKFGPHGLWSKILEPVKFFGEYKYYMHVQVTCSDAELYQGYVEAVESKIRFLWAGTAE 412
Query: 216 TLMIERDTYGKLQCHPYPHEY 236
+ +++ +Q H P Y
Sbjct: 413 SRAQSIESFPHIQLHLNPRRY 433
>gi|1377872|gb|AAC52609.1| poly(A) polymerase V, partial [Mus musculus]
Length = 303
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 85/113 (75%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA
Sbjct: 177 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWA 236
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 117
+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR
Sbjct: 237 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 289
>gi|407396778|gb|EKF27540.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi marinkellei]
Length = 645
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 122/234 (52%), Gaps = 21/234 (8%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D+ +V S N RVA I+ LVP+ F LR +K W K RG+YSN GF G+
Sbjct: 173 LLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIG 232
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNP---------VMLCAIDEAELGFSV 113
WA+LVA VCQ +PN + +V RFFR+Y W PNP + L +
Sbjct: 233 WAILVAFVCQCHPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGR 292
Query: 114 -WDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ- 171
WDPR+++ D P++TPA P N+ +NV+ + LR + +F G+ IC + A+
Sbjct: 293 GWDPRESKSDAMALFPVLTPAVPYGNACFNVTLTNLRQLCAEFARGHEICSSSLVASAEE 352
Query: 172 ----------WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 215
WS L EP FF +Y+ YL V + +A+ + VES++R L
Sbjct: 353 AKSRFGPHGIWSRLLEPVKFFGNYKYYLHVLVSCTDAEAYQGYVDAVESKIRFL 406
>gi|71419820|ref|XP_811284.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70875931|gb|EAN89433.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 645
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 121/234 (51%), Gaps = 21/234 (8%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D+ +V S N RVA I+ LVP+ F LR +K W K RG+YSN GF G+
Sbjct: 173 LLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIG 232
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNP---------VMLCAIDEAELGFSV 113
WA+LVA VCQ +PN + +V RFFR+Y W PNP + L +
Sbjct: 233 WAILVAFVCQCHPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGR 292
Query: 114 -WDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ- 171
WDPR+++ D P++TPA P N+ +NV+ + LR + +F G+ IC + A+
Sbjct: 293 GWDPRESKSDAMALFPVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEE 352
Query: 172 ----------WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 215
WS L EP FF ++ YL V + +A+ + VESR+R L
Sbjct: 353 AKSRFGPHGIWSRLLEPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESRIRFL 406
>gi|294943027|ref|XP_002783739.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239896395|gb|EER15535.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 274
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 118/210 (56%), Gaps = 21/210 (10%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE + RS+NG RV+D I VP+ HF LR ++ WA+RRG+YSN G+LGGV
Sbjct: 65 NLLCGMDEKSARSINGVRVSDAIKTCVPHFAHFLGALRVIRAWARRRGIYSNALGYLGGV 124
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAEL----GF---SVW 114
+WA+LVARVCQL+PN PS LV RFFRVY+ W W + +E GF VW
Sbjct: 125 SWAILVARVCQLFPNMGPSQLVVRFFRVYSRWNWDPSEGAVVLRHSEQRNGEGFQHHKVW 184
Query: 115 DPRKNRRDKTHHMP-------IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE--V 165
P R +P +ITPAYP MNS++ V+ ++ + + + G I V
Sbjct: 185 CPPPKRTTTDQPLPLAASPMAVITPAYPSMNSTFGVTRMSMDTIKKELERGAGIISSKGV 244
Query: 166 ELNKAQ-WSALFEPYLFFE----SYRNYLQ 190
+L + W L EP FF+ Y+ +LQ
Sbjct: 245 DLRSRECWETLLEPIHFFDYDQGGYKQFLQ 274
>gi|108707804|gb|ABF95599.1| Poly polymerase central domain containing protein, expressed [Oryza
sativa Japonica Group]
Length = 550
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 156/308 (50%), Gaps = 31/308 (10%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L V+EP+ R L+G RV QI++L+PN++ F LRCLK WA++RG++ ++ GF G++
Sbjct: 226 LLAAVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIH 285
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
A+L A VC ++P+A S L + FF +++ W WP PV L +D+ P R
Sbjct: 286 LAILAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVSL--LDQ---------PTPWRPH 334
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTI-------CEEVELN-KAQWSA 174
MPI+ P P + +++ ST + ++ Q G + E+ + N W+
Sbjct: 335 CCSFMPIVMPCSPPEFCASSITRSTFNKIKEELQRGFALTKLGVCTVEQGDRNGDINWTE 394
Query: 175 LFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH 234
LF P+ + Y+++L++ + A A++L W GWV+SR R L L +E + G + C P P
Sbjct: 395 LFAPFPYTVRYKHFLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLE--SIG-VDCDPDPS 451
Query: 235 EYVDTSKPCAHCAFFMGLQRKPG---------EVVQEGQQFDIRGSVEEFKLSINMYMFW 285
E D S + FF GL + E + DI G + I M + W
Sbjct: 452 EQADHSMIEPNVVFFWGLMYRTSTNICIDSVKEDFMKSVTNDIYGKEKCTHSDITMSIVW 511
Query: 286 KPGMEICV 293
+ CV
Sbjct: 512 PTHLPKCV 519
>gi|218200293|gb|EEC82720.1| hypothetical protein OsI_27407 [Oryza sativa Indica Group]
Length = 455
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 136/273 (49%), Gaps = 20/273 (7%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D + RSL+G RV +QI++LVPN + F LRC+K WAKRRG++ ++ GF G++
Sbjct: 142 LLQKLDSRSWRSLSGVRVNEQIVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIH 201
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
A+L A VCQ YP + L + FF ++ W W PV L P RR
Sbjct: 202 LAILAAYVCQRYPYGTINGLFTIFFDIFAHWNWQIPVSLHG-----------QPTNCRRP 250
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
MPI+ P P + N++ T + + ++ G + +E + +W LF P+ +
Sbjct: 251 DGSFMPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYA 310
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 242
Y +L++ + A +++L W GWV+SR R L L +E ++C P D+++
Sbjct: 311 TKYEEFLRIALCAPTSEELRDWAGWVKSRFRNLILKLESI---GVECDP------DSTEE 361
Query: 243 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF 275
H F + G + + DI E+F
Sbjct: 362 VDHTVFEPSIVCHWGLIYKTSTHIDISSLGEDF 394
>gi|407832565|gb|EKF98495.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi]
Length = 645
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 121/234 (51%), Gaps = 21/234 (8%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D+ +V S N RVA I+ LVP+ F LR +K W K RG+YSN GF G+
Sbjct: 173 LLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIG 232
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNP---------VMLCAIDEAELGFSV 113
WA+LVA VCQ +PN + +V RFFR+Y W PNP + L +
Sbjct: 233 WAILVAFVCQCHPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGR 292
Query: 114 -WDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ- 171
WDPR+++ D P++TPA P N+ +NV+ + LR + +F G+ IC + A+
Sbjct: 293 GWDPRESKSDAMALFPVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEE 352
Query: 172 ----------WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 215
WS L EP FF ++ YL V + +A+ + VES++R L
Sbjct: 353 AKSRFGPHGIWSRLLEPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESKIRFL 406
>gi|238583172|ref|XP_002390161.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
gi|215453244|gb|EEB91091.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
Length = 309
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 87/116 (75%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE VRSL G RVA++IL+LVPNV+ F +LRC+K WA+RR +YSNV GF GGV
Sbjct: 170 NLLRNIDERCVRSLGGSRVANEILRLVPNVQVFRDSLRCIKLWAQRRAIYSNVNGFFGGV 229
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 117
WA++VAR+CQLYPNA+ +VSRFF + W WP PV+L I+E L VW+P+
Sbjct: 230 AWAMVVARICQLYPNAIAGAIVSRFFIIMYQWTWPQPVLLKQIEEGPLQVRVWNPK 285
>gi|325184553|emb|CCA19046.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 799
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 145/278 (52%), Gaps = 33/278 (11%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L V +V+SLN RV+ IL LVPN + F R ++ WA+RRG+YS+ G+L G+N
Sbjct: 420 ILAGVSAASVKSLNAPRVSSMILSLVPNRQVFRRVSRAIRAWARRRGIYSSKLGYLSGIN 479
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WALL A VCQL+P S + FF V + W+WP P+ML +A+LG W + RD
Sbjct: 480 WALLTAFVCQLFPGRTVSYVFVHFFYVLSEWQWPKPIMLNIPYDAKLGLECWSFQ--LRD 537
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKA------------ 170
+TH MPIITPAYP MNSS V+ STL V+ ++ + E L+
Sbjct: 538 RTHVMPIITPAYPQMNSSAQVTASTLSVIKEELWRARDLLEREILSSITSHQQDQRTRKE 597
Query: 171 -------------QWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTL 217
W L++P FF Y Y+ + I ++ +L W+ +V SRL +L
Sbjct: 598 AGALEKPDTDTFLSWDVLYQPSSFFVRYDWYVGLTI-QIDSSELGRWETFVCSRLHKLVK 656
Query: 218 MIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRK 255
M++ L H YP V+ A + F+GL+R+
Sbjct: 657 MLQDLPMIDL-VHGYPQFLVNK----AGSSLFLGLKRR 689
>gi|300120198|emb|CBK19752.2| unnamed protein product [Blastocystis hominis]
Length = 359
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 115/195 (58%), Gaps = 5/195 (2%)
Query: 45 AKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI 104
A +RG+Y NVTG+LGGVN ALL LYPNA S+++ FR++ W W PV++ +
Sbjct: 109 AYKRGIYKNVTGYLGGVNCALLCCYASLLYPNATASVVLYNCFRIFAEWDWQKPVLVRDV 168
Query: 105 D-EAELGFS--VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTI 161
ELG VW+P++N R + PI+TP YP NS+YNV ST VM+ +F+ +
Sbjct: 169 QLNPELGHDKDVWNPKENERCQNDLFPILTPCYPSQNSTYNVMASTRDVMVAEFKRARDV 228
Query: 162 CEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 221
+ + W+ LF+ + FF SY+ Y+Q+++ A ++ W G+VES++R+ T MIE
Sbjct: 229 TLSILKGETTWATLFKEFPFFTSYKYYIQIEVSAKTSEVFNNWYGFVESQIRRYTRMIEG 288
Query: 222 DTYGKLQCHPYPHEY 236
+ + H YP +
Sbjct: 289 NK--SIVIHVYPTSF 301
>gi|414888171|tpg|DAA64185.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 545
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 140/275 (50%), Gaps = 39/275 (14%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFC----------TTLRCLKFWAKRRGVYS 52
+L +D + RSL+G RV +QI++LVPN E FC T LRC+K WA++RG++
Sbjct: 230 LLQKIDTRSWRSLSGVRVNEQIVQLVPNAE-FCFTGNTMQKFQTLLRCIKLWARKRGLHC 288
Query: 53 NVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVML------CAIDE 106
+ GF G++ A+L A VC+ +P+A S L + FF+ + W W PV L C E
Sbjct: 289 HYLGFFAGIHLAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPVSLHDELTTCLHSE 348
Query: 107 AELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVE 166
L MPI+ P P + V+ +L+ + ++ G + +
Sbjct: 349 GRL-----------------MPIVMPCTPPEFCASTVTKGSLKKIREELTRGYVLTRDPL 391
Query: 167 LNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGK 226
+ QWS LFEP+ + + Y+ +L++ + A +L W GWV+SR R L L +ER
Sbjct: 392 RHDFQWSWLFEPFPYDQKYQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLER---AG 448
Query: 227 LQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQ 261
++C P P E VD + + F+ GL P ++Q
Sbjct: 449 IECDPCPSEEVDHTDNDPNVVFYWGL--IPKRIIQ 481
>gi|226492962|ref|NP_001152292.1| LOC100285931 [Zea mays]
gi|195654767|gb|ACG46851.1| poly [Zea mays]
gi|238006566|gb|ACR34318.1| unknown [Zea mays]
gi|414866508|tpg|DAA45065.1| TPA: poly [Zea mays]
Length = 535
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 167/338 (49%), Gaps = 37/338 (10%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
VL +VD P+ R L+G R QI++LVPN++ F LRCLK WA++RG++ ++ GF G++
Sbjct: 221 VLENVDGPSWRCLSGVRANRQIIQLVPNMKKFQYLLRCLKLWARKRGLHCHLLGFFAGIH 280
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR- 121
A+L A VC+ +PNA + L+S FF ++ W WP PV S+ DP R
Sbjct: 281 LAILAAYVCRRHPNASINTLLSLFFDIFVHWPWPLPV------------SLLDPPVPCRG 328
Query: 122 -DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
D MPI+ P P S + + ST + ++ G + ++ WS LF P+
Sbjct: 329 PDGCSLMPIMLPCIPPEFCSSSTTESTFSKIKEELWRGYALSKDTRSTDFNWSWLFAPFP 388
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
+ Y+ +L++ + A ++L W GWV+SR R L L +E + G + C P P E VD +
Sbjct: 389 YGARYKCFLRIVLSAPMGEELRDWVGWVKSRFRNLLLKLE--SLG-VYCDPDPSEQVDHT 445
Query: 241 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI--NMYMFWKPGMEIC------ 292
+ FF GL + + Q I E+F S+ N+Y G E C
Sbjct: 446 ITDPNVVFFWGL------IYRRNIQICISSLKEDFMKSVCNNIY-----GKEKCAHSDIT 494
Query: 293 VSHIRRKQIPPYVFPEGYKRTRHPR-LASQQRSSENGN 329
+S + Q+P VF + P+ + Q +N N
Sbjct: 495 MSIVGPPQLPKSVFDLSVYSEKLPQHMMGHQLMKQNYN 532
>gi|226498102|ref|NP_001142239.1| uncharacterized protein LOC100274408 [Zea mays]
gi|194707762|gb|ACF87965.1| unknown [Zea mays]
Length = 430
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 140/275 (50%), Gaps = 39/275 (14%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFC----------TTLRCLKFWAKRRGVYS 52
+L +D + RSL+G RV +QI++LVPN E FC T LRC+K WA++RG++
Sbjct: 115 LLQKIDTRSWRSLSGVRVNEQIVQLVPNAE-FCFTGNTMQKFQTLLRCIKLWARKRGLHC 173
Query: 53 NVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVML------CAIDE 106
+ GF G++ A+L A VC+ +P+A S L + FF+ + W W PV L C E
Sbjct: 174 HYLGFFAGIHLAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPVSLHDELTTCLHSE 233
Query: 107 AELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVE 166
L MPI+ P P + V+ +L+ + ++ G + +
Sbjct: 234 GRL-----------------MPIVMPCTPLEFCASTVTKGSLKKIREELTRGYVLTRDPL 276
Query: 167 LNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGK 226
+ QWS LFEP+ + + Y+ +L++ + A +L W GWV+SR R L L +ER
Sbjct: 277 RHDFQWSWLFEPFPYDQKYQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLER---AG 333
Query: 227 LQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQ 261
++C P P E VD + + F+ GL P ++Q
Sbjct: 334 IECDPCPSEEVDHTDNDPNVVFYWGL--IPKRIIQ 366
>gi|222637720|gb|EEE67852.1| hypothetical protein OsJ_25654 [Oryza sativa Japonica Group]
Length = 454
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 21/273 (7%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D + RSL+G RV +QI++LVPN + F LRC+K WAKRRG++ ++ GF G++
Sbjct: 142 LLQKLDSLSWRSLSGVRVNEQIVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIH 201
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
A+L A VCQ YP + L + FF ++ W W PV L P RR
Sbjct: 202 LAILAAYVCQRYPYGTINGLFTIFFDIFAHWNWQIPVSLHG-----------QPTNCRRP 250
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
MPI+ P P + N++ T + + ++ G + +E + +W LF P+ +
Sbjct: 251 DGSFMPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYA 310
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 242
Y +L++ + A +++L W GWV+SR L+++ ++ G ++C P D+++
Sbjct: 311 TKYEEFLRIALCAPTSEELRDWAGWVKSR---FNLILKLESIG-VECDP------DSTEE 360
Query: 243 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF 275
H F + G + + DI E+F
Sbjct: 361 VDHTVFEPSIVCHWGLIYKTSTHIDISSLGEDF 393
>gi|414888168|tpg|DAA64182.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 430
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 140/275 (50%), Gaps = 39/275 (14%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFC----------TTLRCLKFWAKRRGVYS 52
+L +D + RSL+G RV +QI++LVPN E FC T LRC+K WA++RG++
Sbjct: 115 LLQKIDTRSWRSLSGVRVNEQIVQLVPNAE-FCFTGNTMQKFQTLLRCIKLWARKRGLHC 173
Query: 53 NVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVML------CAIDE 106
+ GF G++ A+L A VC+ +P+A S L + FF+ + W W PV L C E
Sbjct: 174 HYLGFFAGIHLAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPVSLHDELTTCLHSE 233
Query: 107 AELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVE 166
L MPI+ P P + V+ +L+ + ++ G + +
Sbjct: 234 GRL-----------------MPIVMPCTPPEFCASTVTKGSLKKIREELTRGYVLTRDPL 276
Query: 167 LNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGK 226
+ QWS LFEP+ + + Y+ +L++ + A +L W GWV+SR R L L +ER
Sbjct: 277 RHDFQWSWLFEPFPYDQKYQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLER---AG 333
Query: 227 LQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQ 261
++C P P E VD + + F+ GL P ++Q
Sbjct: 334 IECDPCPSEEVDHTDNDPNVVFYWGL--IPKRIIQ 366
>gi|24059888|dbj|BAC21354.1| poly(A) polymerase-like protein [Oryza sativa Japonica Group]
Length = 472
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 21/273 (7%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D + RSL+G RV +QI++LVPN + F LRC+K WAKRRG++ ++ GF G++
Sbjct: 160 LLQKLDSLSWRSLSGVRVNEQIVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIH 219
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
A+L A VCQ YP + L + FF ++ W W PV L P RR
Sbjct: 220 LAILAAYVCQRYPYGTINGLFTIFFDIFAHWNWQIPVSLHG-----------QPTNCRRP 268
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
MPI+ P P + N++ T + + ++ G + +E + +W LF P+ +
Sbjct: 269 DGSFMPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYA 328
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 242
Y +L++ + A +++L W GWV+SR L+++ ++ G ++C P D+++
Sbjct: 329 TKYEEFLRIALCAPTSEELRDWAGWVKSR---FNLILKLESIG-VECDP------DSTEE 378
Query: 243 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF 275
H F + G + + DI E+F
Sbjct: 379 VDHTVFEPSIVCHWGLIYKTSTHIDISSLGEDF 411
>gi|219117850|ref|XP_002179712.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217408765|gb|EEC48698.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 336
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 114/195 (58%), Gaps = 14/195 (7%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEH----FCTTLRCLKFWAKRRGVYSNVTGF 57
+VL+ D T +SLNG RV + I LV F T +RC++ WAK RG+YSN G+
Sbjct: 145 AVLDGADGATEKSLNGPRVTNLIAALVSGTPQRYQVFLTVVRCVRKWAKARGLYSNKMGY 204
Query: 58 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 117
GGVN + VA V QLYPNA + L+ +FF V+ WRWP P++L +A G VW
Sbjct: 205 WGGVNINIGVALVVQLYPNACGASLLRKFFLVFKTWRWPQPLLLTKPHDAGYGLPVWSVA 264
Query: 118 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV----ELNKAQ-- 171
R P+ITPAYP MNS+ VS TL+++ ++F G+T+ +++ + N AQ
Sbjct: 265 TAVR---QVAPMITPAYPAMNSTLAVSRQTLQILQEEFNRGHTVVDQLWKDYQKNPAQEL 321
Query: 172 -WSALFEPYLFFESY 185
W+ LFEP FF +Y
Sbjct: 322 NWNTLFEPSDFFINY 336
>gi|340054738|emb|CCC49040.1| putative poly(A) polymerase [Trypanosoma vivax Y486]
Length = 671
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 119/234 (50%), Gaps = 21/234 (8%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D+ +V S N RVA I+ LVP+ F LR +K W K RG+YSN GF G+
Sbjct: 173 LLRGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIG 232
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNP---------VMLCAIDEAELGFS- 112
WA+LVA V Q +PN + +V RFFR+Y W PNP + L +
Sbjct: 233 WAILVAFVSQCHPNQNAAGMVVRFFRIYHSWFSPNPHESGKENRAIYLTETMRVKTSLGR 292
Query: 113 VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE---VELNK 169
WDPR+++ D P++TPA P N+ YNV+ + LR + +F G+ IC + +N
Sbjct: 293 CWDPRESKSDALALFPVLTPAVPYGNACYNVTITNLRQLCSEFARGHEICSSCIGMSVND 352
Query: 170 AQ--------WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 215
+ W+ + EP F YR YL + I + + + VES++R L
Sbjct: 353 TRTKFGKYGLWNKILEPVKVFGEYRYYLHIQITCTDPEAYQGYVDAVESKIRFL 406
>gi|391331065|ref|XP_003739971.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
Length = 493
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 116/198 (58%), Gaps = 6/198 (3%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+++D+ VRSLNG RV + +L+ VP F L+ +++WAK + +YS+ G+LGGV
Sbjct: 189 SLISDIR--CVRSLNGYRVTEMVLRFVPRYRVFQLALKAIRYWAKCQKIYSHTLGYLGGV 246
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+WA+LVA+VC ++P A + ++++FF V + WRWP PVML + + +W +
Sbjct: 247 SWAILVAKVCTMFPKAGAARILNKFFLVMSQWRWPEPVMLLP-EGYGVSSQLWSITQMPW 305
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D MPIITP YP NSS+NVS STL VM + G I +++ + + W + F P
Sbjct: 306 DI---MPIITPVYPQQNSSFNVSKSTLLVMKNALTEGVRITDDILMERCDWKSFFHPVHI 362
Query: 182 FESYRNYLQVDIVAANAD 199
+ Y +Y+ + D
Sbjct: 363 ADMYEHYVVLQTFRYTTD 380
>gi|401881479|gb|EJT45778.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
CBS 2479]
gi|406696602|gb|EKC99884.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
CBS 8904]
Length = 573
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 181/420 (43%), Gaps = 98/420 (23%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L VD+ + RSLN V D IL LVP+V F T LR ++ WAK F GGV
Sbjct: 162 ILRGVDDASQRSLN---VTDMILNLVPDVATFRTALRTIRLWAK---------SFPGGVA 209
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WALL AR+CQLYPNA PS +VS+FF +Y W
Sbjct: 210 WALLTARICQLYPNAAPSTIVSKFFPIYYQW----------------------------- 240
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
MP+ITPAYP M S++N++ ST+ ++ ++ + + W LF P FF
Sbjct: 241 ----MPVITPAYPSMCSTHNITQSTMTIIKNEMLRDKIVNNP----GSSWVELFTPVDFF 292
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTL--------------------MIERD 222
YR Y+QV A++A DL K W+ + ++ L + + E +
Sbjct: 293 SLYRTYVQVVASASSAQDL---KDWLRTLVQDLEMTDNVLLAHPQVNGISKTYICLTEEE 349
Query: 223 TYGKLQCHPYP-------HEYVDTSKPCAHCA-FFMGL--QRKPGEVVQEGQQFDIRGSV 272
Q P +Y D + FF+GL ++KP + Q+ +Q ++ +
Sbjct: 350 QAQASQGELPPEAMMRKEEDYADKEHTKVYTKNFFIGLDIEKKPKD-GQQPRQLNLYYAS 408
Query: 273 EEFKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRS------S 325
+ F + + + + M + + +R ++P + FP+G + +QQ +
Sbjct: 409 KRFCFACQSWDKYNEQDMSVILRPCKRSELPAFCFPDGQPPKKKKGKRAQQEKVGDAALA 468
Query: 326 ENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEP 385
QTGS + E D+ GP KR P P+ P V S TG++ P
Sbjct: 469 TEAEGGQTGSQQAGESAGEITDEQGPSKRSKAEP------DPNGAVP--VPSATGADPAP 520
>gi|301087134|gb|ADK60784.1| nucleic acid binding protein [Arachis diogoi]
gi|301087263|gb|ADK60848.1| putative nucleic acid binding protein, partial [Arachis diogoi]
Length = 74
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/74 (89%), Positives = 69/74 (93%)
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
N ALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLC I+E ELGFSVWDPRKN R
Sbjct: 1 NLALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEENELGFSVWDPRKNPR 60
Query: 122 DKTHHMPIITPAYP 135
D+THHMPIITPAYP
Sbjct: 61 DRTHHMPIITPAYP 74
>gi|413955904|gb|AFW88553.1| hypothetical protein ZEAMMB73_008817 [Zea mays]
Length = 508
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 144/271 (53%), Gaps = 14/271 (5%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
VL +VD P+ R L+G R QI++LVPN++ F LRCLK WA++RG+ ++ GF G++
Sbjct: 221 VLENVDGPSWRCLSGVRANRQIIQLVPNMKKFQYLLRCLKLWARKRGLDCHLLGFFAGIH 280
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
A+L A VC+ +PNA + L+S FF ++ W WP PV L +D L D
Sbjct: 281 LAILAAYVCRRHPNASINTLLSLFFDIFVHWPWPLPVSL--LDPPVLC--------GGPD 330
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
MPI+ P P S + + ST + ++ + G + ++ + WS LF P+ +
Sbjct: 331 GCSLMPIMLPCIPPEFCSSSTTESTFSKIKEELRRGYALSKDTRSTDSDWSWLFAPFPYG 390
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 242
Y+ +L++ + A D+L W GWV+SR R L L +E + G + C P P + VD +
Sbjct: 391 ARYKCFLRIVLSAPMEDELRDWVGWVKSRFRNLLLKLE--SLG-VYCDPDPSKQVDHTIT 447
Query: 243 CAHCAFFMGL-QRKPGEVVQEGQQFDIRGSV 272
+ FF GL R+ ++ + D SV
Sbjct: 448 DPNVVFFWGLIYRRSIQICTNSLKEDFMKSV 478
>gi|170036999|ref|XP_001846348.1| poly a polymerase [Culex quinquefasciatus]
gi|167879976|gb|EDS43359.1| poly a polymerase [Culex quinquefasciatus]
Length = 531
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 86/129 (66%), Gaps = 1/129 (0%)
Query: 49 GVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE 108
G+YSN G+ GGV+W +LVAR CQL PN + + V +FF V+ W+WP PV L D
Sbjct: 194 GIYSNSLGYFGGVSWGMLVARTCQL-PNVIAATQVHKFFLVFLRWKWPQPVFLKRPDTVN 252
Query: 109 LGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELN 168
LGF VWD R N +D+ H M IITPAYP NS+++VS+ST +VM+++F I +E+ L
Sbjct: 253 LGFQVWDSRVNVQDRFHLMSIITPAYPQQNSTFHVSSSTRKVMLNEFNSDMQITDEIMLG 312
Query: 169 KAQWSALFE 177
KA W LFE
Sbjct: 313 KAGWDKLFE 321
>gi|145546083|ref|XP_001458725.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426546|emb|CAK91328.1| unnamed protein product [Paramecium tetraurelia]
Length = 550
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 149/279 (53%), Gaps = 21/279 (7%)
Query: 8 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 67
++ ++ +LNG + I K +P+ F LR +K WAK+R V SN+ G+LGG++WA+L+
Sbjct: 206 EDKSMYALNGRKNGILISKSMPDHSQFVQALRIIKQWAKKRKVSSNIIGYLGGISWAILM 265
Query: 68 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 127
A++CQL+P VS FF++Y+ W W PV++ ++ + + + D K R DK M
Sbjct: 266 AKICQLFPRVDLCQTVSLFFQIYSQWNWKVPVVIDESEQEIICYYLQDEDK-RNDKI--M 322
Query: 128 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 187
IITPAYP N+++ V T + + +FQ G W+ + P+ FF+ ++
Sbjct: 323 QIITPAYPFFNTTFKVHKITFQTIFQEFQIGAQ-------KLGDWNEVLRPFDFFDCFQY 375
Query: 188 YLQVDIVAANADDLLAWKGWVESRLRQLTLMI--ERDTYG----KLQCHPYPHEYVDTSK 241
++ + IV+ +++ W G+ E++L +L ++ + Y +L+ P E ++
Sbjct: 376 FVALSIVSKTSENFHKWTGFCEAQLPKLLKLVGNNEEVYDTKSFELRITPEGEENLERDH 435
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 280
+F+G+++ + QE +R + +F + +N
Sbjct: 436 -AKSLTYFLGIKK----LKQEAWPLFLRLPITQFAIELN 469
>gi|301100486|ref|XP_002899333.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262104250|gb|EEY62302.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 990
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/136 (52%), Positives = 98/136 (72%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L V E ++++LN RV+ +L LVP + LR ++ WA+RRG+YS G+LGG++
Sbjct: 574 MLVGVHETSMKALNAPRVSSMLLCLVPRRREYRIVLRAVRAWARRRGIYSAKLGYLGGIS 633
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
WA+LVA VCQLYPNA P+ + RFF+V + W+WP PVML I +A LGF +WDPR++ D
Sbjct: 634 WAILVAFVCQLYPNAEPAKIFVRFFQVLSEWQWPQPVMLNMIYDAGLGFDMWDPRQSVFD 693
Query: 123 KTHHMPIITPAYPCMN 138
++H MPIITPAYP MN
Sbjct: 694 RSHIMPIITPAYPHMN 709
>gi|222623746|gb|EEE57878.1| hypothetical protein OsJ_08540 [Oryza sativa Japonica Group]
Length = 253
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/238 (40%), Positives = 113/238 (47%), Gaps = 68/238 (28%)
Query: 2 SVLNDVDE-PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
SVL +D+ T RSLNG RVAD+IL+LVP F T LRC+K WAK RGVYSNV GFLGG
Sbjct: 32 SVLRGLDDLATARSLNGIRVADEILRLVPETAVFRTMLRCVKHWAKARGVYSNVAGFLGG 91
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI--DEAELGFSVWDPRK 118
+ WA+LVAR+CQLYPN P+ P VML AI D+ ELG
Sbjct: 92 IGWAILVARMCQLYPNTSPACCSRASSAALRGGSGPARVMLRAIEHDDGELGL------- 144
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP 178
RR LRV +Q G+ +C+E
Sbjct: 145 -RRH-------------------------LRVTTEQLAVGDDVCQE-------------- 164
Query: 179 YLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
IV A A W GWVESRLRQL+ +E DT G L CH +P Y
Sbjct: 165 --------------IVKAGA----MWVGWVESRLRQLSARVEADTSGVLLCHLHPQAY 204
>gi|326508888|dbj|BAJ86837.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 540
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 14/249 (5%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +D + +SL+G RV +QI++LVPN E F LRC+K WA+RRG++ ++ G G++
Sbjct: 227 LRRLDSRSWKSLSGVRVNEQIVQLVPNQEKFQILLRCIKLWARRRGLHCHLLGSFAGIHL 286
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+L A VCQ +PNA + L + FF ++ W W PV L P R
Sbjct: 287 AILAAYVCQRFPNATANGLFTMFFGIFAHWPWHIPVDLHG-----------QPTNCRHSD 335
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 183
MPI+ P P + N++ T R + ++ G + +++ + +W+ +FEP+ +
Sbjct: 336 GCLMPIVMPCTPPELCASNMTEGTFRKIREELMRGYVLTKDLGSHDFEWAWIFEPFPYST 395
Query: 184 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC 243
+Y +L++ + A +++L W GWV+SR L L +E ++C P + VD +
Sbjct: 396 TYGQFLRIALCAPTSEELHDWIGWVKSRFPYLILKLENI---GIECDPNSSQEVDHTVIK 452
Query: 244 AHCAFFMGL 252
+ + GL
Sbjct: 453 PNTVYHWGL 461
>gi|145551783|ref|XP_001461568.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429403|emb|CAK94195.1| unnamed protein product [Paramecium tetraurelia]
Length = 533
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 124/219 (56%), Gaps = 17/219 (7%)
Query: 8 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 67
++ ++ +LNG + I K +P+ F LR +K WAK+R V SN+ G+LGG++WA+L+
Sbjct: 182 EDKSLYALNGRKNGILISKSMPDHSQFVQALRIIKQWAKKRKVSSNIIGYLGGISWAILM 241
Query: 68 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKN---RRDKT 124
A++CQL+P VS FF++Y+ W W PV+ IDE+E F + K +RD+
Sbjct: 242 AKICQLFPRVDVCQTVSLFFQIYSQWNWKIPVV---IDESEQDFIQIETFKTLCWKRDED 298
Query: 125 HH----MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
M IITPAYP N+++ V+ T + + +FQ G W+ + P
Sbjct: 299 KRNDKIMQIITPAYPFFNTTFKVNKITFQTIFQEFQIGAQ-------KLGDWNEVLRPLD 351
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMI 219
FF+ ++ ++ + IV+ ++++ W G+ E++L +L +I
Sbjct: 352 FFDCFQYFVAISIVSKSSENFHKWTGFCEAQLPKLLKLI 390
>gi|426246819|ref|XP_004017185.1| PREDICTED: poly(A) polymerase alpha-like, partial [Ovis aries]
Length = 244
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA
Sbjct: 120 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWA 179
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRW-PNPVMLCAIDEA 107
+LVAR CQLYPNA+ S LV +FF V++ W+W P PV+L D++
Sbjct: 180 MLVARTCQLYPNAIASTLVHKFFLVFSKWQWHPTPVLLVKPDKS 223
>gi|405977001|gb|EKC41474.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 323
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 130/237 (54%), Gaps = 15/237 (6%)
Query: 95 WPNPVMLCAI---DEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVM 151
WP PV+L ++ ++ L F VWDPR N D H MPIITP YP N+++ V+ S+ +M
Sbjct: 3 WPQPVLLKSLVHENKHNLSFPVWDPRVNTSDMFHLMPIITPTYPHENTTFTVTLSSRSIM 62
Query: 152 MDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESR 211
++ + G I ++ + +W ALFEP FF+ Y++YL + + D L W G+ ES+
Sbjct: 63 TEELKDGFEIVSKIYEGREEWGALFEPSNFFQKYKHYLVLTVSTVEEKDYLEWHGYAESK 122
Query: 212 LRQLTLMIERDTYGKL-QCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQF-DIR 269
LR L +ER+ KL HP P ++ S C +F+GL V E Q F D+
Sbjct: 123 LRLLIGNLERNPCIKLAHVHPSPLGPLNESDDEHLCRWFIGLTF----VKIENQNFVDLT 178
Query: 270 GSVEEFKLSINMYMF----WKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ 322
++ F +++ + K GM++ + H++R+Q+ YV PE +++ R+A+ Q
Sbjct: 179 FDIQSFTNTVHKQAYHINLMKDGMKVKIKHVKRRQLGLYVPPEILLQSK--RVAAAQ 233
>gi|294895248|ref|XP_002775109.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239881038|gb|EER06925.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 413
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 83/119 (69%), Gaps = 4/119 (3%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D+ +VR +NG RVAD ILKLVP F LR +K WAKRRG+Y+N+ GF GG+
Sbjct: 187 LLKNLDDRSVRCVNGTRVADLILKLVPTPNTFRGCLRLIKLWAKRRGLYANIIGFFGGIT 246
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-AELG---FSVWDPR 117
WA+LVARVCQ++PN LV RFF + + W W NPV LC I + +E+G F VW+P+
Sbjct: 247 WAILVARVCQMFPNMQSVQLVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPK 305
>gi|242212591|ref|XP_002472128.1| predicted protein [Postia placenta Mad-698-R]
gi|220728772|gb|EED82659.1| predicted protein [Postia placenta Mad-698-R]
Length = 438
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 100/190 (52%), Gaps = 21/190 (11%)
Query: 73 LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITP 132
LYPNA+ +VSRFF + W WP PV+L I+E L VW+P+ D+ H MPIITP
Sbjct: 156 LYPNAIAGAIVSRFFIIMYQWTWPQPVLLKQIEEGPLPVRVWNPKLYPADRAHRMPIITP 215
Query: 133 AYPCMNSSYNVSTSTLRVMMDQFQ----------------YGNTICEEVELNKAQWSALF 176
AYP M +++NV+ ST +M ++F+ G+ I + V + A WS LF
Sbjct: 216 AYPSMCATHNVTASTQMIMTEEFKKGQLEFYSPGRYLLFLAGSEIVDRVIVGSADWSELF 275
Query: 177 EPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
+ FF YR YLQV +++ + W G VESR+RQL + +E + H +
Sbjct: 276 SKHDFFHKYRYYLQVIASTGSSELQIKWAGTVESRIRQLVMKLEY-----VDSLTLAHPF 330
Query: 237 VDTSKPCAHC 246
+ + HC
Sbjct: 331 IKGFEQVLHC 340
>gi|118376886|ref|XP_001021625.1| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|89303391|gb|EAS01379.1| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 707
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 145/290 (50%), Gaps = 30/290 (10%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEH----------FCTTLRCLKFWAKRRGVYSN 53
L +DE S+NG R I++ V EH F +L+ +K WA+ G+Y N
Sbjct: 302 LTMMDERDKLSINGYRCNQAIIRYV--TEHSEDKQQSKQRFQESLKVIKIWARNNGIYEN 359
Query: 54 VTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSV 113
G+LGG++WALL+A++CQ++PN + ++ +FF Y+ W+WP +L FS
Sbjct: 360 RLGYLGGISWALLLAKICQMFPNLEVNGIIEQFFLQYSSWKWPTMEVLLG------PFS- 412
Query: 114 WDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTIC-EEVELNKAQW 172
P + ++++ M I TPAYP NS+ V L ++ + + N I EE++ +A W
Sbjct: 413 -QPEERQKNQKFEMSIYTPAYPEYNSTERVKKINLEIIDYKIKEANRIIQEEIKTGQAPW 471
Query: 173 SALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRL--RQLTL--MIERDTYGKLQ 228
L + F Y ++++D++ D+ + + +L + LTL + +L+
Sbjct: 472 DRLIQEEDFLNKYTKFIEIDLIRIERDETMREFKTQQDKLSVKLLTLFEFFSQKKPQELE 531
Query: 229 CHPYPHEYVDTSKPCAHC-AFFMGLQRKPGEVVQEGQQFDIRGSVEEFKL 277
P+P Y + C AF +G++ K +QE ++ + ++EF +
Sbjct: 532 IRPWPFFYKKKDQKYPQCSAFLIGIKAKSH--IQE--EYSFKNCIQEFAM 577
>gi|402697301|gb|AFQ90838.1| polyA polymerase alpha, partial [Dendropicos gabonensis]
Length = 170
Score = 129 bits (325), Expect = 3e-27, Method: Composition-based stats.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 83 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 142
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMW 93
LVAR CQLYPNA+ S LV +FF V++ W
Sbjct: 143 LVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|402697299|gb|AFQ90837.1| polyA polymerase alpha, partial [Cyrtodactylus sp. JJF-2012]
Length = 170
Score = 129 bits (325), Expect = 3e-27, Method: Composition-based stats.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 83 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 142
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMW 93
LVAR CQLYPNA+ S LV +FF V++ W
Sbjct: 143 LVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|340546035|gb|AEK51816.1| poly(A) polymerase alpha [Heteronotia binoei]
Length = 170
Score = 129 bits (325), Expect = 3e-27, Method: Composition-based stats.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 83 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 142
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMW 93
LVAR CQLYPNA+ S LV +FF V++ W
Sbjct: 143 LVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|349602954|gb|AEP98933.1| Poly(A) polymerase alpha-like protein, partial [Equus caballus]
Length = 279
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 70/89 (78%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA
Sbjct: 191 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWA 250
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMW 93
+LVAR CQLYPNA+ S LV +FF V++ W
Sbjct: 251 MLVARTCQLYPNAIASTLVHKFFLVFSKW 279
>gi|402697303|gb|AFQ90839.1| polyA polymerase alpha, partial [Malaclemys terrapin]
Length = 170
Score = 127 bits (320), Expect = 1e-26, Method: Composition-based stats.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GF GGV+WA+
Sbjct: 83 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFXGGVSWAM 142
Query: 66 LVARVCQLYPNAVPSMLVSRFFRVYTMW 93
LVAR CQLYPNA+ S LV +FF V++ W
Sbjct: 143 LVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|354681991|ref|NP_001238935.1| poly(A) polymerase alpha isoform 2 [Homo sapiens]
gi|441666293|ref|XP_004091880.1| PREDICTED: poly(A) polymerase alpha-like [Nomascus leucogenys]
gi|12654217|gb|AAH00927.1| PAPOLA protein [Homo sapiens]
gi|28375483|emb|CAD66560.1| unnamed protein product [Homo sapiens]
gi|119602051|gb|EAW81645.1| poly(A) polymerase alpha, isoform CRA_c [Homo sapiens]
Length = 285
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 70/89 (78%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA
Sbjct: 191 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWA 250
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMW 93
+LVAR CQLYPNA+ S LV +FF V++ W
Sbjct: 251 MLVARTCQLYPNAIASTLVHKFFLVFSKW 279
>gi|1377870|gb|AAC52608.1| poly(A) polymerase VI [Mus musculus]
gi|149044214|gb|EDL97596.1| poly (A) polymerase alpha (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 293
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 70/89 (78%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA
Sbjct: 191 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWA 250
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMW 93
+LVAR CQLYPNA+ S LV +FF V++ W
Sbjct: 251 MLVARTCQLYPNAIASTLVHKFFLVFSKW 279
>gi|62202042|gb|AAH92668.1| Papolb protein [Danio rerio]
Length = 283
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 71/89 (79%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++D +RSLNGCRV D+IL LVPN+E+F TLR +K WAKR +YSN+ GFLGGV+
Sbjct: 188 LLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVS 247
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYT 91
WA+LVAR CQLYPNAV + LV +FF V++
Sbjct: 248 WAMLVARTCQLYPNAVAATLVHKFFLVFS 276
>gi|116207486|ref|XP_001229552.1| hypothetical protein CHGG_03036 [Chaetomium globosum CBS 148.51]
gi|88183633|gb|EAQ91101.1| hypothetical protein CHGG_03036 [Chaetomium globosum CBS 148.51]
Length = 592
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 79/122 (64%), Gaps = 2/122 (1%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L + E VRSLNG RV D IL LVP F LR +K WA+R+ +Y+N+ G+ GGV
Sbjct: 181 NLLRGLSENEVRSLNGTRVTDDILHLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGV 240
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE--LGFSVWDPRKN 119
WA+LVARVCQLYP A +++V++FF + W WP PV+L I+ VW+P+ +
Sbjct: 241 AWAMLVARVCQLYPKATSAVVVNKFFHIMFKWPWPLPVLLKDIEYGSPVTRVPVWNPKSS 300
Query: 120 RR 121
RR
Sbjct: 301 RR 302
>gi|115474207|ref|NP_001060702.1| Os07g0688500 [Oryza sativa Japonica Group]
gi|113612238|dbj|BAF22616.1| Os07g0688500 [Oryza sativa Japonica Group]
Length = 447
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 129/273 (47%), Gaps = 39/273 (14%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D + RSL+G RV +QI++LVPN + F LRC+K WAKRRG++ ++ GF G++
Sbjct: 185 LLQKLDSLSWRSLSGVRVNEQIVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIH 244
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
A+L A VCQ YP I+ + G P RR
Sbjct: 245 LAILAAYVCQRYPYG-------------------------TINVSLHG----QPTNCRRP 275
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 182
MPI+ P P + N++ T + + ++ G + +E + +W LF P+ +
Sbjct: 276 DGSFMPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYA 335
Query: 183 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 242
Y +L++ + A +++L W GWV+SR L+++ ++ G ++C P E VD
Sbjct: 336 TKYEEFLRIALCAPTSEELRDWAGWVKSR---FNLILKLESIG-VECDPDSTEEVD---- 387
Query: 243 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF 275
H F + G + + DI E+F
Sbjct: 388 --HTVFEPSIVCHWGLIYKTSTHIDISSLGEDF 418
>gi|308507393|ref|XP_003115880.1| hypothetical protein CRE_18491 [Caenorhabditis remanei]
gi|308256415|gb|EFP00368.1| hypothetical protein CRE_18491 [Caenorhabditis remanei]
Length = 311
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 91/178 (51%), Gaps = 37/178 (20%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L DV + LNG RVA+Q+L VPN + FC +LR +K WAK GVYSN GF GG+ W
Sbjct: 61 LIDVRISNGKILNGIRVAEQLL--VPNRDTFCQSLRAIKLWAKNHGVYSNAMGFFGGITW 118
Query: 64 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 123
A+LVAR CQLYPNA PS ++ + F V++ W WP+PV+L D
Sbjct: 119 AILVARTCQLYPNAAPSKIIQKVFLVFSTWNWPSPVILKHFD------------------ 160
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
C++S +TL ++ + + IC ++ A W+ L + F
Sbjct: 161 ------------CVDSK-----TTLHIIQKEMKAALKICNRIQKGNATWNDLANWFRF 201
>gi|355709238|gb|AES03525.1| poly polymerase alpha [Mustela putorius furo]
Length = 275
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 67/87 (77%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D +RSLNGCRV D+IL LVPN+++F TLR +K WA +YSN+ GFLGGV+WA
Sbjct: 188 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAXXHNIYSNILGFLGGVSWA 247
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYT 91
+LVAR CQLYPNA+ S LV +FF V++
Sbjct: 248 MLVARTCQLYPNAIASTLVHKFFLVFS 274
>gi|115378897|ref|ZP_01466034.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
DW4/3-1]
gi|115364103|gb|EAU63201.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
DW4/3-1]
Length = 1080
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 137/299 (45%), Gaps = 31/299 (10%)
Query: 7 VDEPTVRSLNGCRVADQILKLV----PNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+D RSL G D +L+ V ++E F T LR +K WAK RGVYS+ G+LGG +
Sbjct: 796 LDLAGFRSLTGWADTDALLECVGREEADLERFRTLLRAVKTWAKARGVYSHALGYLGGFS 855
Query: 63 WALLVARVCQLYP---NAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKN 119
WA+L A C P + L+ FF ++ W WP PV L G + + P +
Sbjct: 856 WAVLTAWACMRAPRDSSRTEEQLLDYFFEMFAAWPWPLPVTLTP------GTARYVP-EG 908
Query: 120 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV--ELNKAQWSALFE 177
+RD+ MP++ PA P N++ NVS STLRV+ ++ + E W ALF
Sbjct: 909 KRDQ---MPVVAPALPPRNTARNVSRSTLRVLREELARASEALRRARQEGTAEAWDALFA 965
Query: 178 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 237
P + V + A +D GW+ L L +E D +L P+P
Sbjct: 966 PVEIPGPTAAQVVVSVEAKAHEDRQVAAGWILGHLTALVYRLEGDR--RLFLRPFP---- 1019
Query: 238 DTSKPCAHCAFFMGLQRK---PGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 293
S+P F +GL + G+ + ++ +++EF+ S + + PG + V
Sbjct: 1020 -PSQP--EGPFRIGLSAQGPEAGQALSHHPGAPLQRALDEFRESFHAWSHRPPGASLSV 1075
>gi|310817728|ref|YP_003950086.1| endonuclease/exonuclease/phosphatase domain-containing protein
[Stigmatella aurantiaca DW4/3-1]
gi|309390800|gb|ADO68259.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella
aurantiaca DW4/3-1]
Length = 1024
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 137/299 (45%), Gaps = 31/299 (10%)
Query: 7 VDEPTVRSLNGCRVADQILKLV----PNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+D RSL G D +L+ V ++E F T LR +K WAK RGVYS+ G+LGG +
Sbjct: 740 LDLAGFRSLTGWADTDALLECVGREEADLERFRTLLRAVKTWAKARGVYSHALGYLGGFS 799
Query: 63 WALLVARVCQLYP---NAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKN 119
WA+L A C P + L+ FF ++ W WP PV L G + + P +
Sbjct: 800 WAVLTAWACMRAPRDSSRTEEQLLDYFFEMFAAWPWPLPVTLTP------GTARYVP-EG 852
Query: 120 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV--ELNKAQWSALFE 177
+RD+ MP++ PA P N++ NVS STLRV+ ++ + E W ALF
Sbjct: 853 KRDQ---MPVVAPALPPRNTARNVSRSTLRVLREELARASEALRRARQEGTAEAWDALFA 909
Query: 178 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 237
P + V + A +D GW+ L L +E D +L P+P
Sbjct: 910 PVEIPGPTAAQVVVSVEAKAHEDRQVAAGWILGHLTALVYRLEGDR--RLFLRPFP---- 963
Query: 238 DTSKPCAHCAFFMGLQRK---PGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 293
S+P F +GL + G+ + ++ +++EF+ S + + PG + V
Sbjct: 964 -PSQP--EGPFRIGLSAQGPEAGQALSHHPGAPLQRALDEFRESFHAWSHRPPGASLSV 1019
>gi|358333281|dbj|GAA51822.1| poly(A) polymerase [Clonorchis sinensis]
Length = 426
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 37/259 (14%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+ ++D +VRSL+G +A ++ K++ HF LR ++ W + R + S V GF +
Sbjct: 76 LYRNMDAISVRSLSGLHLAHELNKMMFGHAHFLPLLRVIRTWVRARAIGSYVYGFPASIA 135
Query: 63 WALLVARVCQ-LYPNAVPSM-----------------------------------LVSRF 86
W ++V +C+ L N+ S LV F
Sbjct: 136 WTIMVVYICRRLGDNSQISTFCVCRRSSVCRTSEPAAERNSGEESLASRSHALFCLVYTF 195
Query: 87 FRVYTMWRWPNPVMLCAIDEA-ELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVST 145
F + W WP+PV + +I A +L WDP++N +D MPI+TP +P N+++ V
Sbjct: 196 FAQFASWPWPHPVQIASIKFASDLNIFSWDPQRNAQDGRDLMPILTPVFPNKNAAFTVRQ 255
Query: 146 STLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWK 205
+T +++ D+ I +V W LFE Y + +R++L + + + ++L+
Sbjct: 256 ATRKIVTDELIRARDIVSDVLRGSGTWEKLFERYDLRDDHRHFLLLTLQTTSKEELVVVG 315
Query: 206 GWVESRLRQLTLMIERDTY 224
G ++SRLR L +E + Y
Sbjct: 316 GLIDSRLRDLAQALEDEQY 334
>gi|342180300|emb|CCC89777.1| putative polynucleotide adenylyltransferase [Trypanosoma congolense
IL3000]
Length = 356
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 140/283 (49%), Gaps = 42/283 (14%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEH--FCTTLRCLKFWAKRRGVYSNVTGFLG 59
S L V T S+NG R ++ + +P V H F T L+ +KFWA RR VY N+ +
Sbjct: 25 SFLLQVARDTRPSVNGIRFTFEVRRRLP-VPHKVFATVLKAVKFWAMRRQVYGNIYTYPN 83
Query: 60 GVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWR----WPNPVMLCAIDEAELGF---- 111
G +A++VARVCQ+ P+ PS+L+ FF YT W +PV L A E+
Sbjct: 84 GAVFAIMVARVCQVLPSPYPSVLLRFFFLFYTQWMSRHDHISPVYLTATLESRGRIPGLP 143
Query: 112 SVWDPRKNR--RDKTHHMPIITPAYPCMNSSYNVSTSTLRVM---MDQFQYGNTICEEVE 166
W P KN RD P+I+PAYP +N + NV L + + Q Q + + +
Sbjct: 144 ESWKPAKNECFRDL---FPVISPAYPYVNDASNVGRCGLESLYSEITQAQRVISASDTLS 200
Query: 167 LNKAQWSALFEPYLFFESYRNYLQVDIVA-----ANADDLLA-WKGWVESRLRQLTLMIE 220
L K L+ PY E + ++L V++ + A+A+ +L W +V S+LR L +E
Sbjct: 201 LEK-----LWRPYCIMEDFAHFLLVEVSSLGDDMADAERILGRWGSYVGSKLRFLIYSVE 255
Query: 221 RDTYGKLQCHPYPHE--------YVDTSKPCAHCAFFMGLQRK 255
R + + P+PH+ +VD C+ F +G++ K
Sbjct: 256 RFVHAR----PHPHKLRAKMDGTFVDRKVCCSSIYFLIGVRSK 294
>gi|401415606|ref|XP_003872298.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488522|emb|CBZ23768.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 500
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 142/304 (46%), Gaps = 41/304 (13%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVP-NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
L+ V P ++NG R +I + +P ++ + LR +K+WA RR VY N+ F GV
Sbjct: 160 LSLVSLPCRATVNGIRTILEIRRRLPLPLDAYACVLRAVKYWAARRQVYGNLYTFPNGVC 219
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMW----RWPNPVMLCAIDEAELGFSV----- 113
A++VAR CQL P A S+++ FF +Y W +PV + DE V
Sbjct: 220 LAIMVARACQLCPVADSSVILRFFFSLYVWWLQRGTRIDPVSIVPTDENVAIARVPGMPP 279
Query: 114 -WDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW 172
WD D P++ PA P +N+++ V S L++ + + +C V + +
Sbjct: 280 PWD---AVWDAADLFPVLNPARPTVNAAHAVGRSGLQLFLKELLRAEQLCSLVPM---PY 333
Query: 173 SALFEPYLFFESYRNYLQVDI------VAANADDLLAWKGWVESRLRQLTLMIERDTYGK 226
SAL+EPY + +R ++ V I +AA D + AWKG+VES+LR +E
Sbjct: 334 SALWEPYNVLDEHRFFVGVHISSEHQSLAACEDTINAWKGYVESKLRMFVYALE----CV 389
Query: 227 LQCHPYPHEYVD----------TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFK 276
+ P+P VD + C AFF G++ +V D+ + EF+
Sbjct: 390 AEVRPFPCPVVDEPPRAVTRRGVTVHCRSRAFFFGVRNGNKDVAHS----DVESAFREFE 445
Query: 277 LSIN 280
++
Sbjct: 446 FAVT 449
>gi|402576343|gb|EJW70302.1| hypothetical protein WUBG_18790, partial [Wuchereria bancrofti]
Length = 79
Score = 117 bits (294), Expect = 1e-23, Method: Composition-based stats.
Identities = 48/76 (63%), Positives = 60/76 (78%)
Query: 18 CRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNA 77
CRVAD+IL+LVPN+ +F LR +K WAK G+YSNV G+LGGV+WA+LVAR CQLYPN
Sbjct: 1 CRVADEILRLVPNISNFTYALRAIKLWAKNHGIYSNVLGYLGGVSWAILVARTCQLYPNT 60
Query: 78 VPSMLVSRFFRVYTMW 93
P+ LV +FF +YT W
Sbjct: 61 GPARLVQKFFLLYTKW 76
>gi|405977000|gb|EKC41473.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 264
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 66/85 (77%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L ++ VRSLNGCRV D+IL LVPN +F TL +K WAK++G+YS V GFLGGV
Sbjct: 179 SLLRHLNTKCVRSLNGCRVTDEILHLVPNQHNFRRTLLAIKIWAKKKGIYSKVLGFLGGV 238
Query: 62 NWALLVARVCQLYPNAVPSMLVSRF 86
+WA+LVARVCQLYPNA P+ L+ +F
Sbjct: 239 SWAILVARVCQLYPNAAPATLLHKF 263
>gi|294888316|ref|XP_002772423.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239876612|gb|EER04239.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 113
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 76/109 (69%), Gaps = 4/109 (3%)
Query: 57 FLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-AELG---FS 112
F GG+ WA+LVARVCQ++PN LV RFF + + W W NPV LC I + +E+G F
Sbjct: 1 FFGGITWAILVARVCQMFPNMQSVQLVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFK 60
Query: 113 VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTI 161
VW+P++ D++H MP+ITPA+P MNS+YNV+ +T R++M + + + +
Sbjct: 61 VWNPKQYASDRSHLMPVITPAFPSMNSTYNVTETTKRIIMGEIERAHKL 109
>gi|355709241|gb|AES03526.1| poly polymerase alpha [Mustela putorius furo]
Length = 358
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 105/193 (54%), Gaps = 14/193 (7%)
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP 178
N D+ H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE
Sbjct: 2 NPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEA 61
Query: 179 YLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYP 233
FF+ Y++Y+ + A L W G VES++R L +E++ + L Q P P
Sbjct: 62 PNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAP 121
Query: 234 HEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPG 288
E D K + +GL K E E D+ ++ F + +IN MF +
Sbjct: 122 KENPD--KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVD 177
Query: 289 MEICVSHIRRKQI 301
M+I H++RKQ+
Sbjct: 178 MKIAAMHVKRKQL 190
>gi|119620436|gb|EAX00031.1| poly(A) polymerase gamma, isoform CRA_c [Homo sapiens]
Length = 425
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 110/206 (53%), Gaps = 8/206 (3%)
Query: 127 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYR 186
MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR
Sbjct: 1 MPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYR 60
Query: 187 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC 246
+Y+ + A+ ++ L W G VES++R L +ER+ + L H P + +
Sbjct: 61 HYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDN 119
Query: 247 AF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRK 299
+ F+G+ + + E V +DI+ + N K GM+I +H+++K
Sbjct: 120 NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKK 179
Query: 300 QIPPYVFPEGYKRTRHPRLASQQRSS 325
Q+ Y+ E ++ + L+ RSS
Sbjct: 180 QLHHYLPAEILQKKKKQSLSDVNRSS 205
>gi|154341292|ref|XP_001566599.1| putative poly(A) polymerase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063922|emb|CAM40113.1| putative poly(A) polymerase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 417
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 142/304 (46%), Gaps = 41/304 (13%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVP-NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
L+ V P ++NG R +I + +P ++ + LR +K+WA +R VY N+ F GV
Sbjct: 77 LSLVSLPCRATVNGIRTILEIRRRLPLPLDSYACVLRAVKYWAAQRQVYGNLYTFPNGVC 136
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRW----PNPVMLCAIDEAELGFSV----- 113
A++VAR CQ P A +++ FF +Y W +PV + +E V
Sbjct: 137 LAIMVARACQFCPVADSGVILRFFFSLYVWWLLRDTRMDPVSIVPKEEDAAIVRVPGMPP 196
Query: 114 -WDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW 172
WD D P++ PA P +N+++ V S L++ + +C V L+ +
Sbjct: 197 PWD---AVWDAADLFPVLNPAQPTVNAAHAVGRSGLQLFFKELLRAEQLCASVPLS---Y 250
Query: 173 SALFEPYLFFESYRNYLQVDI------VAANADDLLAWKGWVESRLRQLTLMIERDTYGK 226
S L++PY + +R ++ V I +AA D + AWKG+VES+LR L +E
Sbjct: 251 SELWKPYNILDEHRFFVGVHISCEHPSLAACEDTINAWKGYVESKLRMLVYSLE----CV 306
Query: 227 LQCHPYPHEYVDTSK-------PCAHC---AFFMGLQRKPGEVVQEGQQFDIRGSVEEFK 276
+ P+P VD S HC AFF G++ +V + D+ + EF+
Sbjct: 307 AEVRPFPRPVVDESPREVTRSGVTMHCRSRAFFFGVRNGNKDVARS----DVEAAFSEFE 362
Query: 277 LSIN 280
S+
Sbjct: 363 FSVT 366
>gi|383455075|ref|YP_005369064.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
2259]
gi|380728996|gb|AFE04998.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
2259]
Length = 1021
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 100/206 (48%), Gaps = 15/206 (7%)
Query: 22 DQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC-QLYPNAVPS 80
D + + E F T LR +K WA+ RG+YS+ G+LGG++W LL A C + P+A+ S
Sbjct: 745 DAVARDAARTERFRTLLRAVKAWARARGIYSHALGYLGGLSWTLLAAWACTRATPDAMRS 804
Query: 81 --MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMN 138
L+S FF + W WP PV L R K +P+I PA P N
Sbjct: 805 DAALLSHFFGTFAAWPWPQPVTLTPETA----------RYRPEGKRDLLPVIAPALPARN 854
Query: 139 SSYNVSTSTLRVMMDQFQYGNTICEEVELNKA--QWSALFEPYLFFESYRNYLQVDIVAA 196
++ NVS ST RV+ ++ + ++A W+ALF+P E+ L++ + A
Sbjct: 855 TARNVSRSTYRVIREELLRARELVARARSSRAPSSWAALFQPLSAHETSPAALRLSVDAP 914
Query: 197 NADDLLAWKGWVESRLRQLTLMIERD 222
A+D GW+ + L +E D
Sbjct: 915 TAEDREVVAGWILGHVTALVYRLEGD 940
>gi|146093287|ref|XP_001466755.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|134071118|emb|CAM69802.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
Length = 500
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 141/300 (47%), Gaps = 33/300 (11%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVP-NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
L+ V P ++NG R +I + +P ++ + LR +K+WA +R VY N+ F GV
Sbjct: 160 LSLVSLPCRATVNGIRTILEIRRRLPLPLDAYACVLRAVKYWAAQRQVYGNLYTFPNGVC 219
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN----PVMLCAIDEAELGFSV----- 113
A++VAR CQL P A +++ FF +Y W + PV + DE V
Sbjct: 220 LAIMVARACQLCPVADSGVILRFFFSLYVWWLLRDTRIAPVSIVPTDENAAIARVPGMPP 279
Query: 114 -WDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW 172
WD D P++ PA P +N+++ V S L++ + + +C V ++ +
Sbjct: 280 PWDAVW---DAADLFPVLNPARPTVNAAHAVGRSGLQLFLKELLRAEQLCALVPMS---Y 333
Query: 173 SALFEPYLFFESYRNYLQVDI------VAANADDLLAWKGWVESRLRQLTLMIERDTYGK 226
SAL+EPY + +R ++ V I +AA D + AWKG+VES+LR +E +
Sbjct: 334 SALWEPYNILDEHRFFVGVHISSEHQSLAACEDTINAWKGYVESKLRMFVYALECVAEVR 393
Query: 227 LQCHPY---PHEYVDTSKPCAHC---AFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 280
P P V HC AFF G++ +V + D+ + EF+ ++
Sbjct: 394 PFSRPVVDEPPRVVTRRGVKVHCRSRAFFFGVRNGNKDV----EHSDVEAAFREFEFAVT 449
>gi|389594193|ref|XP_003722343.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
gi|321438841|emb|CBZ12601.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
Length = 500
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 141/304 (46%), Gaps = 41/304 (13%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNV-EHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
L+ V P ++NG R +I + +P + + LR +K+WA +R VY N+ F GV
Sbjct: 160 LSLVSLPCRATVNGIRTILEIRRRLPLLLAAYACVLRAVKYWAAQRQVYGNLYTFPNGVC 219
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN----PVMLCAIDEAELGFSV----- 113
A++VAR CQL P A +++ FF +Y W + PV + +DE V
Sbjct: 220 LAIMVARACQLCPVADSGVILRFFFSLYVWWLLRDTRIAPVSIVPMDENAAIARVPGMPP 279
Query: 114 -WDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW 172
WD D P++ PA P +N+++ V S L++ + + +C V ++ +
Sbjct: 280 PWDAVW---DAADLFPVLNPARPTVNAAHAVGRSGLQLFLKELLRAEQLCALVPMS---Y 333
Query: 173 SALFEPYLFFESYRNYLQVDI------VAANADDLLAWKGWVESRLRQLTLMIERDTYGK 226
SAL+ PY + +R ++ V I +AA + + AWKG+VES+LR +E
Sbjct: 334 SALWAPYNILDEHRFFVGVHISSEHQSLAACEEAINAWKGYVESKLRMFVYALE----CV 389
Query: 227 LQCHPYPHEYVD----------TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFK 276
+ P+P VD + C AFF G++ +V D+ + EF+
Sbjct: 390 AEVRPFPRPVVDEPPRAVTRRGVTVHCRSRAFFFGVRNGNNDVAHS----DVEAAFREFE 445
Query: 277 LSIN 280
++
Sbjct: 446 FAVT 449
>gi|349603143|gb|AEP99064.1| Poly(A) polymerase gamma-like protein, partial [Equus caballus]
Length = 435
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 8/200 (4%)
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
D+ H MPIITPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP F
Sbjct: 1 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 60
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F+ YR+Y+ + A+ ++ W G VES++R L +ER+ + L H P + +
Sbjct: 61 FQKYRHYIVLTASASTEENHSEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 119
Query: 242 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 294
+ F+G+ + + E V +DI+ + N K GM+I +
Sbjct: 120 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 179
Query: 295 HIRRKQIPPYVFPEGYKRTR 314
H+++KQ+ Y+ E ++ +
Sbjct: 180 HVKKKQLHHYLPAEILQKKK 199
>gi|297597453|ref|NP_001043998.2| Os01g0702900 [Oryza sativa Japonica Group]
gi|222619129|gb|EEE55261.1| hypothetical protein OsJ_03164 [Oryza sativa Japonica Group]
gi|255673599|dbj|BAF05912.2| Os01g0702900 [Oryza sativa Japonica Group]
Length = 129
Score = 112 bits (281), Expect = 4e-22, Method: Composition-based stats.
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Query: 2 SVLNDVDE-PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
SVL +D+ T RSLNG RVAD+IL+LVP F T LRC+K WAK RGVYSNV GFLGG
Sbjct: 32 SVLRGLDDLATARSLNGIRVADEILRLVPETAVFRTMLRCVKHWAKARGVYSNVAGFLGG 91
Query: 61 VNWALLVARVCQLYPNAVPS 80
+ WA+LVAR+CQLYPN P+
Sbjct: 92 IGWAILVARMCQLYPNTSPA 111
>gi|261265299|gb|ACX55867.1| polyA polymerase [Bubalus bubalis]
Length = 83
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 59/83 (71%)
Query: 57 FLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDP 116
FLGGV+WA+LVAR CQLYPNA+ S LV +FF V W WPNPV+L +E L VWDP
Sbjct: 1 FLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVSPKWEWPNPVLLKQPEECNLNLPVWDP 60
Query: 117 RKNRRDKTHHMPIITPAYPCMNS 139
R N D+ H MPIITPAYP NS
Sbjct: 61 RVNPSDRYHLMPIITPAYPQQNS 83
>gi|441666296|ref|XP_003275413.2| PREDICTED: poly(A) polymerase alpha [Nomascus leucogenys]
Length = 432
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 101/185 (54%), Gaps = 14/185 (7%)
Query: 127 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYR 186
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y+
Sbjct: 1 MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYK 60
Query: 187 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSK 241
+Y+ + A L W G VES++R L +E++ + L Q P P E D K
Sbjct: 61 HYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--K 118
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHI 296
+ +GL K E E D+ ++ F + +IN MF + M+I H+
Sbjct: 119 EEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 176
Query: 297 RRKQI 301
+RKQ+
Sbjct: 177 KRKQL 181
>gi|395539230|ref|XP_003771575.1| PREDICTED: poly(A) polymerase alpha-like [Sarcophilus harrisii]
Length = 379
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 62/83 (74%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D +RSLNGCRV D+IL LVPN+++F TLR +K WAK +YSN+ GFLGGV+WA
Sbjct: 291 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKIWAKHHNIYSNILGFLGGVSWA 350
Query: 65 LLVARVCQLYPNAVPSMLVSRFF 87
+LVAR CQLYPNA+ S S +
Sbjct: 351 MLVARTCQLYPNAIASTQTSAHY 373
>gi|402581474|gb|EJW75422.1| hypothetical protein WUBG_13666 [Wuchereria bancrofti]
Length = 351
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 125/263 (47%), Gaps = 34/263 (12%)
Query: 95 WPNPVML------CAIDEAELGFSVWDPRKNRRDKT------HHMPIITPAYPCMNSSYN 142
WP+PV+L A D L VWDPR D+ H MPI+TPA+P NS++N
Sbjct: 37 WPHPVVLKETEVSHARDMPSLQELVWDPRSRSGDRESPSRRFHLMPIVTPAFPQQNSTFN 96
Query: 143 VSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLL 202
V+ S+L+++M++ + G ++ KA WSALFE FF Y+++L + ++A D L
Sbjct: 97 VTKSSLKIIMNEIEEGLVTINDIMKGKAGWSALFEEVNFFSRYKHFLALLCLSATEQDEL 156
Query: 203 AWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY--------VDTSKPCAHC-AFFMGLQ 253
W G VES++R L +ER ++ CH + Y V S C +F+GL
Sbjct: 157 VWCGLVESKIRFLIASLERRESIRV-CHVHTKYYQPRNDPFPVQVSLQNPRCRLWFIGLD 215
Query: 254 RKPGEVVQEGQQFDIRGSVEEFKLSINMYM----FWKPGMEICVSHIRRKQIPPYV---- 305
++ DI+ V+ F +N + GM + ++R+ ++ ++
Sbjct: 216 LNKT----VSRKIDIQHEVQSFMDLLNSMATTQNIYVEGMSVIPHYLRKAELVKWLKMED 271
Query: 306 FPEGYKRTRHPRLASQQRSSENG 328
G K + R+A+ Q G
Sbjct: 272 LTRGKKAPKRRRIATSQNQQATG 294
>gi|125527403|gb|EAY75517.1| hypothetical protein OsI_03421 [Oryza sativa Indica Group]
Length = 129
Score = 108 bits (271), Expect = 6e-21, Method: Composition-based stats.
Identities = 51/80 (63%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Query: 2 SVLNDVDE-PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
SVL +D+ T SLNG RVAD+IL+LVP F T LRC+ WAK RGVYSNV GFLGG
Sbjct: 32 SVLRGLDDLATAHSLNGIRVADEILRLVPETAMFRTMLRCVNHWAKARGVYSNVAGFLGG 91
Query: 61 VNWALLVARVCQLYPNAVPS 80
+ WA+LVAR+CQLYPN P+
Sbjct: 92 IGWAILVARMCQLYPNTSPA 111
>gi|71660695|ref|XP_822063.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70887456|gb|EAO00212.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 485
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 131/289 (45%), Gaps = 33/289 (11%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVP-NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
S L V T S+NG R ++ + +P + F T L+ +K WA RR VY N+ + G
Sbjct: 156 SFLLQVARDTRHSVNGLRTVLEVKRRLPVAYDVFTTVLKSVKLWAMRRKVYGNLYCYPSG 215
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWR----WPNPVMLCAIDEAELGF----S 112
V A++VAR+CQ+ P + P++L+ FF YT W +PV + E+
Sbjct: 216 VVLAIMVARICQVMPASHPNVLLRFFFLFYTQWLSRHDRISPVYITTSLESRGRIPGLPD 275
Query: 113 VWDPRKNR-RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ 171
WDPR++ RD +P+I PAYP +N + NV +L V + Y + +E
Sbjct: 276 SWDPRRDACRDDL--LPVINPAYPYVNDARNVGRCSLEVFYAELTYAYRLLSNLE---TP 330
Query: 172 WSALFEPYLFFESYRNYLQVDIVAANADD------LLAWKGWVESRLRQLTLMIERDTYG 225
A++EPY + Y + V + ++ L W +V S+LR L +ER
Sbjct: 331 LEAIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSKLRILLYALER---- 386
Query: 226 KLQCHPYPHEYVD--------TSKPCAHCAFFMGLQRKPGEVVQEGQQF 266
+ PYP + D + + F +G++ K G + F
Sbjct: 387 IVDARPYPQKLNDGPPRSAPKSGRFLKGSCFIVGIKEKVGRRFPQKNMF 435
>gi|211909028|gb|ACJ12807.1| poly(A) polymerase alpha [Bubalus bubalis]
Length = 108
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 69/104 (66%)
Query: 113 VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW 172
VWDPR N D+ H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+W
Sbjct: 1 VWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEW 60
Query: 173 SALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLT 216
S LFE FF+ Y++Y+ + A L W G VES++R L
Sbjct: 61 SKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILV 104
>gi|154417414|ref|XP_001581727.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
gi|121915957|gb|EAY20741.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
Length = 467
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 144/300 (48%), Gaps = 30/300 (10%)
Query: 6 DVDEPTVR-SLNG---CRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
D EP + SLNG C + ++K PN +F R ++ WA++R ++ N+ G+L G+
Sbjct: 172 DKLEPKAQLSLNGYLNCLLIRDLMKNHPNFPYFT---RFIRNWAQKREIFGNLYGYLKGI 228
Query: 62 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
N +++ A +C +PN SML+ FF ++ W W + +D F + DP
Sbjct: 229 NISMMCAIICNQHPNCSLSMLIFHFFEYFSSWDWD---IQLNLDSNTPDFQLNDP----- 280
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
M ++T +YP +NS V+TS+ + ++ + Q ++ ++ W LF+ F
Sbjct: 281 -----MILMTQSYPQINSLRAVTTSSRKRIIKELQRALETTKKALISDLSWQELFKGGCF 335
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
F YR +L +D++ N+ G++ S+L +L ++E + G + + +P + K
Sbjct: 336 FADYRYFLCIDLIPTNSQIKDEIIGFLSSKLTRLVKILE-EIPGICEANIWPSKISYGGK 394
Query: 242 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 301
F++GL K G + + DI + F I+ K M I IR+K++
Sbjct: 395 ----IIFYIGLNTKSG----QSKTIDINHAKNNFISYISSSTLGK-AMSINFKIIRKKEL 445
>gi|443916802|gb|ELU37750.1| polymerase [Rhizoctonia solani AG-1 IA]
Length = 508
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 88/169 (52%), Gaps = 44/169 (26%)
Query: 94 RWPNPVMLCAIDE--AELGFS------VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVST 145
+WP P++L I+E EL FS VW+PR D+ H MPIITP+YP M S++NV+
Sbjct: 77 KWPQPILLQQIEEEVKELDFSKRMNFRVWNPRVC--DRNHLMPIITPSYPSMCSTHNVTR 134
Query: 146 STLRVMMDQF------------------QYGNTICEEVELNKAQWSALFEPYLFFESYRN 187
ST+ VM D+F + G+ I E++ +A+WS LF + FF+ YR
Sbjct: 135 STMSVMKDEFMRGKFSYLLLCTDDTNNKRPGSQIVEQIMFRRAEWSELFAKHDFFQKYRY 194
Query: 188 YLQVDIVAANADDLLAW----------------KGWVESRLRQLTLMIE 220
YLQ+ + A+D L W G VESRLRQL + +E
Sbjct: 195 YLQIIASSGKAEDQLKWYVSPFRAWVVSEAASRSGTVESRLRQLVMKLE 243
>gi|308482424|ref|XP_003103415.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
gi|308259836|gb|EFP03789.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
Length = 388
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 15/167 (8%)
Query: 113 VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW 172
VWDPR N D+ H MPIITPA+P NS++NVS STL ++ ++ + IC+++ A W
Sbjct: 156 VWDPRINYSDRFHLMPIITPAFPEQNSTHNVSKSTLHIIQEEMKSALLICDQIHAGSATW 215
Query: 173 SALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
+ LFE FF YR+++ + + + + G+ ESR+RQL ++ER+ KL H
Sbjct: 216 NNLFEEVNFFSRYRHFVALSMNEESNE------GFFESRIRQLVQIMERNCQVKL-AHIN 268
Query: 233 PHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI 279
P ++ +F+GL E+++ + D+ +E FK ++
Sbjct: 269 PKKFKSVQNA---SVWFLGL-----ELIENVKNLDLTAEIEGFKKNV 307
>gi|440789896|gb|ELR11187.1| EGFlike domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 904
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 31/207 (14%)
Query: 49 GVYSNVTGFLGGVNWALLVARVCQ---LYPNAVPSM-----------LVSRFFRVYTMWR 94
G+YSN GFLGG +W++LVA VC+ LY + + L++ FF VY W
Sbjct: 693 GLYSNAVGFLGGFSWSVLVAYVCKNSKLYAKSAAAASGDGDLSIEERLLAEFFEVYNHWD 752
Query: 95 WPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQ 154
W PV + G + + P ++ DK MPI+TP P NS+ NV+ STL M +
Sbjct: 753 WQQPVAITP------GSARYKP-GHKSDK---MPIVTPTPPFNNSARNVARSTLTEMQQE 802
Query: 155 FQYGNTICEEVELN-KAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLR 213
F I + + N +A + L +P FF+ Y YL V++ + ++D++ GW+ESRL
Sbjct: 803 FFRAFDITQAPQWNSEAGLNDLLQPTNFFKDYHYYLMVEVHSLSSDEVTKCLGWLESRLI 862
Query: 214 QLTLMIERD--TYGKLQCHPYPHEYVD 238
L +E++ TY + P+P +V+
Sbjct: 863 ALIFDLEKNPQTYAR----PFPGTFVN 885
>gi|67481711|ref|XP_656205.1| poly(A) polymerase [Entamoeba histolytica HM-1:IMSS]
gi|74890661|sp|Q51D88.1|PAP_ENTHI RecName: Full=Poly(A) polymerase; Short=PAP; AltName: Full=EhPAP;
AltName: Full=Polynucleotide adenylyltransferase
gi|56473392|gb|EAL50821.1| poly(A) polymerase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449709651|gb|EMD48877.1| poly(A) polymerase, putative [Entamoeba histolytica KU27]
Length = 522
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 15/218 (6%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPN--VEHFCTTLRCLKFWAKRRGVYSNVTGFLG 59
++L ++DE R++NG R D I VPN E F +R +K W K+RG+Y V FL
Sbjct: 151 NILKNMDELDTRAINGVRNTDIIDAFVPNHSEEAFRVMVRTIKLWTKKRGIYGYVYCFLN 210
Query: 60 GVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRW-PNPVMLCAIDEAELGFSVWDPRK 118
G++ +LVA+V L+ +FF+VY+ W W PVML D+
Sbjct: 211 GISIEILVAQVISENYQLDNVRLLEKFFQVYSSWDWLRTPVMLGTNDDF----------- 259
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-WSALFE 177
N + K + I+TPA P N++++++ +L ++ + + G I E W+ LF+
Sbjct: 260 NDKKKEGVIQILTPASPSENAAFSITKFSLEMIKRELKRGQEIVHEFSSEGVNDWAKLFK 319
Query: 178 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 215
P F Y +++ + +++ + L G ES L L
Sbjct: 320 PRHLFCGYYIFIEFIVTSSSLEGLTTTIGKFESGLVNL 357
>gi|407036560|gb|EKE38225.1| poly(A) polymerase, putative [Entamoeba nuttalli P19]
Length = 522
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 15/218 (6%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPN--VEHFCTTLRCLKFWAKRRGVYSNVTGFLG 59
++L ++DE R++NG R D I VPN E F +R +K W K+RG+Y V FL
Sbjct: 151 NILKNMDELDTRAINGVRNTDIIDAFVPNHSEEAFRVMVRTIKLWTKKRGIYGYVYCFLN 210
Query: 60 GVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRW-PNPVMLCAIDEAELGFSVWDPRK 118
G++ +LVA+V L+ +FF+VY+ W W PVML D+
Sbjct: 211 GISIEILVAQVISENYQLDNVRLLEKFFQVYSSWDWLRTPVMLGTNDDF----------- 259
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-WSALFE 177
N + K + I+TPA P N++++++ +L ++ + + G I E W+ LF+
Sbjct: 260 NDKKKEGIIQILTPASPSENAAFSITKFSLEMIKRELKRGQEIVHEFSSEGVNDWAKLFK 319
Query: 178 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 215
P F Y +++ + +++ + L G ES L L
Sbjct: 320 PRHLFCGYYIFIEFIVTSSSLEGLTTTIGKFESGLVNL 357
>gi|340503458|gb|EGR30046.1| poly polymerase, putative [Ichthyophthirius multifiliis]
Length = 269
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 83/143 (58%), Gaps = 4/143 (2%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L D+ E V SLNG R I+ V + E F TL+ +K WAK +GVY+N+ GFLGG++
Sbjct: 100 LLEDMTEKDVDSLNGRRCNQSIINSVKDQEKFKNTLKFIKLWAKSKGVYNNMLGFLGGIS 159
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN-PVMLCAIDEAELGFSVWDPRKNRR 121
WA+LVA++CQ++PN + L++ FF YT W + P+ I E +R
Sbjct: 160 WAILVAKICQMFPNYEVNQLINEFFYYYTHWDFSQIPI---KIKEYYENTKHKHYNIKKR 216
Query: 122 DKTHHMPIITPAYPCMNSSYNVS 144
++ M ++T +P NS+ ++S
Sbjct: 217 KESIFMNVMTSCFPEYNSTAHLS 239
>gi|167393770|ref|XP_001740701.1| poly(A) polymerase [Entamoeba dispar SAW760]
gi|165895071|gb|EDR22875.1| poly(A) polymerase [Entamoeba dispar SAW760]
Length = 521
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 15/218 (6%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPN--VEHFCTTLRCLKFWAKRRGVYSNVTGFLG 59
++L ++DE R++NG R D I VPN E F +R +K W K+RG+Y V FL
Sbjct: 151 NILKNMDELDTRAINGVRNTDIIDAFVPNHSEEAFRVMVRTIKLWTKKRGIYGYVYCFLN 210
Query: 60 GVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN-PVMLCAIDEAELGFSVWDPRK 118
G++ +LVA+V L+ +FF+VY+ W W PVML D+
Sbjct: 211 GISIEILVAQVISENYQLDNVRLLEKFFQVYSSWDWLRAPVMLGTNDDF----------- 259
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-WSALFE 177
N + K + I+TPA P N++++++ +L ++ + + G I E W+ LF+
Sbjct: 260 NDKKKEGVIQILTPASPSENAAFSITKFSLELIKRELKRGQEIVHEFSSEGVNDWAKLFK 319
Query: 178 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 215
P F Y +++ + +++ + L G ES L L
Sbjct: 320 PRHLFCGYYIFIEFIVTSSSLEGLTTTIGKFESGLVNL 357
>gi|242035935|ref|XP_002465362.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
gi|241919216|gb|EER92360.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
Length = 589
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 120/252 (47%), Gaps = 38/252 (15%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
VL +VD P+ R L+G R QI++LVPN++ + GF G++
Sbjct: 296 VLENVDGPSWRCLSGVRANRQIIQLVPNMK---------------------LLGFFAGIH 334
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR- 121
A+L A VC+ +PNA + L+S FF ++ W WP PV S+ DP R
Sbjct: 335 LAILAAYVCRRHPNASINTLLSLFFDIFAHWPWPLPV------------SLLDPPVLCRG 382
Query: 122 -DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
D MPI+ P P S + + ST + ++ + G + ++ WS LF +
Sbjct: 383 PDGCSLMPIMLPCNPPEFCSSSTTESTFSKIKEELRRGYALTKDTRSTDFDWSWLFASFP 442
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
+ Y+ +L++ + A ++L W GWV+SR R L L +E + G + C P E VD +
Sbjct: 443 YGARYKCFLRIVLSAPLDEELRDWVGWVKSRFRNLLLKLE--SLG-VYCDPDSSEQVDHT 499
Query: 241 KPCAHCAFFMGL 252
+ FF GL
Sbjct: 500 ITEPNVVFFWGL 511
>gi|115448957|ref|NP_001048258.1| Os02g0771500 [Oryza sativa Japonica Group]
gi|113537789|dbj|BAF10172.1| Os02g0771500, partial [Oryza sativa Japonica Group]
Length = 91
Score = 102 bits (255), Expect = 4e-19, Method: Composition-based stats.
Identities = 45/65 (69%), Positives = 53/65 (81%)
Query: 16 NGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP 75
+G RVAD+IL+LVP+ F T LRC+K WAK RGVYSNV GFLGG+ WA+LVARVCQLYP
Sbjct: 9 HGIRVADEILRLVPDTAAFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARVCQLYP 68
Query: 76 NAVPS 80
N P+
Sbjct: 69 NTSPA 73
>gi|261327018|emb|CBH09993.1| poly(A) polymerase [Trypanosoma brucei gambiense DAL972]
Length = 487
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 121/278 (43%), Gaps = 29/278 (10%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVP-NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
S L V T S NG R +I + +P + F L+ +K WA RR VY NV + G
Sbjct: 156 SFLLKVARETRPSANGIRFTFEIKRRLPVPYDVFTAVLKTVKLWAMRRMVYGNVYTYPNG 215
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN----PVMLCAIDEAELGF----S 112
A++VARVCQ+ P++ PS L+ FF YT W + PV L A E
Sbjct: 216 AVLAIMVARVCQVLPSSHPSTLLRFFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPD 275
Query: 113 VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW 172
W P K+ + P+I+PAYP +N + +V L + + I EV +
Sbjct: 276 SWKPSKD-KICCDLFPVISPAYPYVNDASSVGRCGLEALYSEITRVQCILTEVRTLPLE- 333
Query: 173 SALFEPYLFFESYRNYLQVDI------VAANADDLLAWKGWVESRLRQLTLMIERDTYGK 226
++EPY E Y +L V + +A L W +V SRLR L IER
Sbjct: 334 -EMWEPYRIEEEYSTFLVVGVSCAGHSMAETEQALSVWSSYVASRLRILIYSIERHA--- 389
Query: 227 LQCHPYPHE-------YVDTSKPCAHCAFFMGLQRKPG 257
Q P P + +V S F +G++ K G
Sbjct: 390 -QARPCPRKIRLKKDNHVGGSSCFLSVNFLIGVKAKEG 426
>gi|72386969|ref|XP_843909.1| poly(A) polymerase [Trypanosoma brucei]
gi|62359037|gb|AAX79486.1| poly(A) polymerase [Trypanosoma brucei]
gi|70800441|gb|AAZ10350.1| poly(A) polymerase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 487
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 118/274 (43%), Gaps = 21/274 (7%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVP-NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
S L V T S NG R +I + +P + F L+ +K WA RR VY NV + G
Sbjct: 156 SFLLKVARETRPSANGIRFTFEIKRRLPVPYDVFTAVLKTVKLWAMRRMVYGNVYTYPNG 215
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN----PVMLCAIDEAELGF----S 112
A++VARVCQ+ P++ PS L+ FF YT W + PV L A E
Sbjct: 216 AVLAIMVARVCQVLPSSHPSTLLRFFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPD 275
Query: 113 VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW 172
W P K+ + P+I+PAYP +N + +V L + + C E
Sbjct: 276 SWKPSKD-KICCDLFPVISPAYPYVNDASSVGRCGLEALYSEIT--RVQCILTEARTLPL 332
Query: 173 SALFEPYLFFESYRNYLQVDI------VAANADDLLAWKGWVESRLRQLTLMIERDTYGK 226
++EPY E Y +L V + +A L W +V SRLR L IER +
Sbjct: 333 EEMWEPYRIEEEYSTFLVVGVSCAGHSMAETEQALSVWSSYVASRLRILIYSIERHAQAR 392
Query: 227 ---LQCHPYPHEYVDTSKPCAHCAFFMGLQRKPG 257
+ P +V S F +G++ K G
Sbjct: 393 PCPRKIRPKKDNHVGGSSCFLSVNFLIGVKAKEG 426
>gi|414888166|tpg|DAA64180.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
gi|414888167|tpg|DAA64181.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 265
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 28/212 (13%)
Query: 56 GFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVML------CAIDEAEL 109
GF G++ A+L A VC+ +P+A S L + FF+ + W W PV L C E L
Sbjct: 12 GFFAGIHLAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPVSLHDELTTCLHSEGRL 71
Query: 110 GFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNK 169
MPI+ P P + V+ +L+ + ++ G + + +
Sbjct: 72 -----------------MPIVMPCTPPEFCASTVTKGSLKKIREELTRGYVLTRDPLRHD 114
Query: 170 AQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQC 229
QWS LFEP+ + + Y+ +L++ + A +L W GWV+SR R L L +ER ++C
Sbjct: 115 FQWSWLFEPFPYDQKYQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLER---AGIEC 171
Query: 230 HPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQ 261
P P E VD + + F+ GL P ++Q
Sbjct: 172 DPCPSEEVDHTDNDPNVVFYWGL--IPKRIIQ 201
>gi|434384462|ref|YP_007095073.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
gi|428015452|gb|AFY91546.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
Length = 1037
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 118/246 (47%), Gaps = 20/246 (8%)
Query: 13 RSLNGCRVADQILKLVPN---VEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
+S+ GC AD I+ LV +E F L+ ++ WAK RG+Y N GFLGG +W+LL A
Sbjct: 744 KSIVGCWEADLIVDLVKQQLRLERFQMLLKAVRSWAKVRGLYGNSWGFLGGFSWSLLCAY 803
Query: 70 VCQLY--PNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 127
C Y P+ + L++ FF++ + W + L ELG + + +
Sbjct: 804 TCIDYRGPDKSLAALLANFFQILSQHNWRQTIAL-----TELG-----KQHQVKLPQDLL 853
Query: 128 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 187
PII+ PC N++ N++ ST +++ D+F I + + K W++L+EP
Sbjct: 854 PIISSIEPCKNTARNITRSTAKILRDEFARAAEISTNILVGKDAWTSLYEPIDLTIGTNA 913
Query: 188 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCA 247
L ++I+ + +ES + LT+ +E +L P+ + TS+ +
Sbjct: 914 LLSIEILDTDEQCRQKCSDLLESTIIGLTIQLE-----QLDVFVRPNPQISTSESKSIFT 968
Query: 248 FFMGLQ 253
F+ L+
Sbjct: 969 LFLQLR 974
>gi|7108951|gb|AAF36551.1|AF201909_1 polyA polymerase [Trypanosoma brucei]
Length = 487
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 119/278 (42%), Gaps = 29/278 (10%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVP-NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
S L V T S NG R +I + +P + F L+ +K WA RR VY NV + G
Sbjct: 156 SFLLKVARETRPSANGIRFTFEIKRRLPVPYDVFTAVLKTVKLWAMRRMVYGNVYTYPNG 215
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN----PVMLCAIDEAELGF----S 112
A++VARVCQ+ P++ PS L+ FF YT W + PV L A E
Sbjct: 216 AVLAIMVARVCQVLPSSHPSTLLRFFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPD 275
Query: 113 VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW 172
W P K+ + P+I+PAYP +N + +V L + + C E
Sbjct: 276 SWKPSKD-KICCDLFPVISPAYPYVNDASSVGRCGLEALYSEIT--RVQCILTEARTLPL 332
Query: 173 SALFEPYLFFESYRNYLQVDI------VAANADDLLAWKGWVESRLRQLTLMIERDTYGK 226
++EPY E Y +L V + +A L W +V SRLR L IER
Sbjct: 333 EEMWEPYRIEEEYSTFLVVGVSCAGHSMAETEQALSVWSSYVASRLRILIYSIERHA--- 389
Query: 227 LQCHPYPHE-------YVDTSKPCAHCAFFMGLQRKPG 257
Q P P + +V S F +G++ K G
Sbjct: 390 -QARPCPRKIRLKKDNHVGGSSCFLSVNFLIGVKAKEG 426
>gi|440294386|gb|ELP87403.1| polyA polymerase, putative [Entamoeba invadens IP1]
Length = 482
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 127/262 (48%), Gaps = 19/262 (7%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVP--NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
+L+++DE + R++NG R D I VP +VE F +R +K W+K+RG+Y V +L G
Sbjct: 152 ILDEMDELSTRAINGRRNTDMINNFVPPHSVEAFKVIVRAIKMWSKKRGIYGYVYSYLNG 211
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWP-NPVMLCAIDEAELGFSVWDPRKN 119
++ +LVA+V L+ +FF Y W W NPVML V D R
Sbjct: 212 ISIEILVAQVISENYQLDNVRLLEKFFHAYATWDWARNPVML----------GVSDDRPE 261
Query: 120 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-WSALFEP 178
R+ K + +ITPA P NS YN++ S+L ++ + G I + + W+ LF+
Sbjct: 262 RK-KEEMVQVITPAAPRENSMYNMTRSSLELLKREMLRGERIVKGYKSEGGNDWNLLFKK 320
Query: 179 YLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 238
F Y +++ V + + L G ES++ + +E + ++ + P Y++
Sbjct: 321 RHCFCGYYIFVEFS-VRGSLESLENKIGMFESKIVRFVRSLE-EMEEVIEVNVIPEGYLE 378
Query: 239 TSKPCAHCAFFMGLQRKPGEVV 260
+ +++G+ K +V
Sbjct: 379 VENAVDY--YYVGMNVKKDLLV 398
>gi|427738965|ref|YP_007058509.1| poly(A) polymerase [Rivularia sp. PCC 7116]
gi|427374006|gb|AFY57962.1| poly(A) polymerase [Rivularia sp. PCC 7116]
Length = 1067
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 18/228 (7%)
Query: 14 SLNGCRVADQILKLVPN---VEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
++ GC AD I + V + F LR ++ WAK R +Y N GFLGG++WALL A
Sbjct: 811 AIIGCWEADFIREFVQEYVPFDSFQWLLRAVRAWAKSRRIYGNNWGFLGGLSWALLSAWS 870
Query: 71 CQL--YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 128
CQ + P L++ FF + W P+ A+ +A +SV PR +P
Sbjct: 871 CQYCDKNHTQPDKLLANFFNHLNQYNWRQPI---ALTDAGKQYSVQVPRD-------LLP 920
Query: 129 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 188
IIT PC N++ N++ ST ++ +F + +E+ WS+LFEP + +
Sbjct: 921 IITSIEPCQNTARNITRSTAEILSGEFARATEMTQEIAAGNLDWSSLFEPINLQQESDIF 980
Query: 189 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
L + ++ + L G++E + ++L+I+ + +G + P+ Y
Sbjct: 981 LNLKLIGNDKQQLEKECGYLEGYI--ISLIIQLENHG-IFVRPWAEMY 1025
>gi|384485719|gb|EIE77899.1| hypothetical protein RO3G_02603 [Rhizopus delemar RA 99-880]
Length = 494
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 138/296 (46%), Gaps = 30/296 (10%)
Query: 2 SVLNDVDEPTVRSLNGCRV----ADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 57
S+L D+DE + S++G RV +QI + +V F L+C+K WA +RG+YS G+
Sbjct: 156 SLLKDIDETCLASMDGPRVNQFCKNQIYR--QHVRLFQVCLQCIKHWATQRGIYSKPIGY 213
Query: 58 LGGVNWALLVARVCQLYPNA---VPSMLVSRFFRVYTMWRWPNPVMLC----AIDEAELG 110
L G +W LL+ + N +M++SRFF +++ W W PVML I+ ++
Sbjct: 214 LNGSSWTLLLVKAYMSIKNKELLSVTMILSRFFSMWSQWPWQMPVMLTDYIPGINGTKIE 273
Query: 111 FSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKA 170
++ N MPI++P +P N + V+ ST R+M +F+ G T+ + A
Sbjct: 274 YNSLAEFDNAV-----MPIVSPCHPVCNVAPYVTKSTRRIMQIEFERGWTLLNKNAHPFA 328
Query: 171 QWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCH 230
LF P + + Y++++ + + W + +++ + +IE D LQ
Sbjct: 329 IIDKLFNPVNYTQRYKHFINIVTSSTTITSHDTWVRKMATQIPRYLELIESDP-NILQAQ 387
Query: 231 PYPHEYVDTSKPCAHCAFFMGLQRKP----GEVVQEGQQFDIRGSVEEFKLSINMY 282
P KP + +Q K G+ +QE + D G++ L + Y
Sbjct: 388 P-------IMKPKQITIRYRTIQEKISLQNGDTLQEAKLNDFAGTLSPGTLYLAYY 436
>gi|413955903|gb|AFW88552.1| hypothetical protein ZEAMMB73_008817 [Zea mays]
Length = 370
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 65/96 (67%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
VL +VD P+ R L+G R QI++LVPN++ F LRCLK WA++RG+ ++ GF G++
Sbjct: 221 VLENVDGPSWRCLSGVRANRQIIQLVPNMKKFQYLLRCLKLWARKRGLDCHLLGFFAGIH 280
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNP 98
A+L A VC+ +PNA + L+S FF ++ W WP P
Sbjct: 281 LAILAAYVCRRHPNASINTLLSLFFDIFVHWPWPLP 316
>gi|340501019|gb|EGR27841.1| poly polymerase, putative [Ichthyophthirius multifiliis]
Length = 306
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 135/284 (47%), Gaps = 23/284 (8%)
Query: 7 VDEPTVRSLNGCRVADQILKLV----PNVE----HFCTTLRCLKFWAKRRGVYSNVTGFL 58
+D+ ++S+NG R IL+ V PN E F L+ +K WA+ G+Y N GFL
Sbjct: 1 MDQKDIKSINGFRSNQAILEYVSEKNPNPEIAKSRFKDALKVIKIWARHNGIYDNRLGFL 60
Query: 59 GGVNWALLVARVCQLYPNAVPSMLVSRFFRVY-TMWRWPNPVMLCAIDEAELGFSVWDPR 117
G++ A+++A++ QL+PN + ++ +FF+ + + W W + E+ +
Sbjct: 61 SGISLAIMLAKILQLFPNLEVNGIIKQFFQTFASRWDWKKMDVQLGSRSEEMKVQM---- 116
Query: 118 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 177
++++ K H IITPAYP N++ V +++ + N + + W + E
Sbjct: 117 QSQQRKCMH--IITPAYPEYNTTDRVKMINFNIIVAKLIASNDYIQNQK--NIVWEKIVE 172
Query: 178 PYLFFESYRNYLQVDIVAANADDL---LAWKGWVESRLRQLTLMIERDTYG--KLQCHPY 232
F Y+ ++++D++ ++ +A K + RL L ++ Y K++ P+
Sbjct: 173 KENFINHYKLFIEIDLIQNKKGEIGQFIAQKKYFALRLLNLFDQLKGIEYDPEKIEVRPW 232
Query: 233 PHEYVDTSKPCAHC-AFFMGLQRKPGEVVQEGQQFDIRGSVEEF 275
P + +C AF +GL+ K + VQ Q I G ++
Sbjct: 233 PIFFDKKDPDYPYCAAFLIGLKNKMHQPVQYSLQEWIVGFAKQL 276
>gi|219887573|gb|ACL54161.1| unknown [Zea mays]
gi|414888169|tpg|DAA64183.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
gi|414888170|tpg|DAA64184.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 482
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D + RSL+G RV +QI++LVPN E F T LRC+K WA++RG++ + GF G++
Sbjct: 230 LLQKIDTRSWRSLSGVRVNEQIVQLVPNAEKFQTLLRCIKLWARKRGLHCHYLGFFAGIH 289
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRW--PNPV 99
A+L A VC+ +P+A S L + FF+ + W W P+P+
Sbjct: 290 LAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPDPL 328
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
H+ I+ AY C + V F + + + QWS LFEP+ + + Y
Sbjct: 289 HLAILA-AYVCRKFPDASVSGLFAVFFQTFAHWPWQVPDPLRHDFQWSWLFEPFPYDQKY 347
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH 245
+ +L++ + A +L W GWV+SR R L L +ER ++C P P E VD + +
Sbjct: 348 QQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLER---AGIECDPCPSEEVDHTDNDPN 404
Query: 246 CAFFMGLQRKPGEVVQ 261
F+ GL P ++Q
Sbjct: 405 VVFYWGL--IPKRIIQ 418
>gi|146163985|ref|XP_001012769.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|146145863|gb|EAR92524.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 641
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 64/93 (68%)
Query: 3 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +++E + SL+G R I++ VPN+++F T R +K WA+ +G+Y N GFLGG++
Sbjct: 199 LLQNMEERDILSLSGRRCNQAIVRSVPNLQNFQITCRFIKLWAQSKGIYENSIGFLGGIS 258
Query: 63 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRW 95
WA+LVA++CQ++PN + L+ FF Y+ W +
Sbjct: 259 WAILVAKICQMFPNYEANQLLDEFFYYYSNWDF 291
>gi|442319649|ref|YP_007359670.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
gi|441487291|gb|AGC43986.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
Length = 1016
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 15/196 (7%)
Query: 32 EHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC-QLYPNAVPS--MLVSRFFR 88
E F LR +K WAK RG+YS+ G++GG++W +L A C + P+A S L++ FF+
Sbjct: 760 ERFRNLLRAVKRWAKARGIYSHALGYMGGLSWTVLAAWACTRGAPDAAKSDAELLAHFFQ 819
Query: 89 VYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTL 148
+ W WP PV A+ + G+ +RD MP+I PA P N++ NVS ST
Sbjct: 820 TFASWPWPQPV---ALTQETAGYRP----DGKRDL---MPVIAPAEPLRNTARNVSRSTF 869
Query: 149 RVMMDQFQYGNTICEEVELNKA--QWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKG 206
R + ++ + + + W LF+P L++ + A + A G
Sbjct: 870 RTVREELVRARELVTGARASSSPHAWEPLFQPVDAPRDLPARLRLSVEAPTPEAHEAAMG 929
Query: 207 WVESRLRQLTLMIERD 222
WV L L +E D
Sbjct: 930 WVLGHLTALVYRLEGD 945
>gi|242786597|ref|XP_002480837.1| poly(A) polymerase pla1, putative [Talaromyces stipitatus ATCC
10500]
gi|218720984|gb|EED20403.1| poly(A) polymerase pla1, putative [Talaromyces stipitatus ATCC
10500]
Length = 420
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 51/70 (72%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +D+ VRSLNG RV DQIL+LV + F LR +K WA+RR +YSN+ GF GGV W
Sbjct: 105 LRGLDDKEVRSLNGTRVTDQILELVAQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 164
Query: 64 ALLVARVCQL 73
A+LVARVCQL
Sbjct: 165 AMLVARVCQL 174
>gi|340052780|emb|CCC47065.1| putative polynucleotide adenylyltransferase [Trypanosoma vivax
Y486]
Length = 486
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 132/304 (43%), Gaps = 36/304 (11%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVP-NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
S L V T S+NG R +I + +P + F T L+ +K WA +R VY N+ + G
Sbjct: 156 SFLLQVARETRHSVNGIRFTLEIKRRLPVTYDVFSTVLKVVKLWAMKRQVYGNLYTYPSG 215
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN----PVMLCAIDEAELGF----S 112
V A++VAR CQ+ P + P++++ FF YT W + PV + +
Sbjct: 216 VVLAIMVARACQVMPASHPNVVLRFFFLFYTQWMSRHDRISPVYITTSLQGRGRVPGMPE 275
Query: 113 VWDPRKNRRDKTHH--MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKA 170
WDP +K H +P++ PAYP +N + V L V + + + E
Sbjct: 276 PWDPAL---EKFSHDLLPVLNPAYPFVNDANAVGRCGLEVFYSEVTRAHHLLSTTE--SF 330
Query: 171 QWSALFEPYLFFESYRNYLQVDIVA------ANADDLLAWKGWVESRLRQLTLMIERDTY 224
+++PY + + ++L V + +DL W +V S+LR L +E
Sbjct: 331 PLEDVWKPYSITDDFSSFLLVQVSCDGNSEEGVENDLEVWSSYVASKLRILIYAVE---- 386
Query: 225 GKLQCHPYPHEYVDTSKPCAH--------CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFK 276
+ PYPH+ D C F +G++ + Q+ Q +++EF+
Sbjct: 387 CIVDARPYPHKLKDRVATSLLGPQHIRRGCVFLIGVRERKDR--QKLHQSMFSSALDEFR 444
Query: 277 LSIN 280
++
Sbjct: 445 YAVQ 448
>gi|345562420|gb|EGX45488.1| hypothetical protein AOL_s00169g94 [Arthrobotrys oligospora ATCC
24927]
Length = 1237
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 118/259 (45%), Gaps = 39/259 (15%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++ PT++ L R +L +PN+ + R +K WA+++GVYS+ GF GGV
Sbjct: 729 SPLWNLTVPTLKKLQAWRDLLFLLSRIPNLAKYRLAYRFIKLWAEKKGVYSSKFGFFGGV 788
Query: 62 NWALLVARVCQLY-PNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNR 120
+ +LL+ARV L P A S L++ FF Y+ +W + V+ L + ++
Sbjct: 789 HISLLLARVAMLLPPTATASQLIAAFFTHYSTTKWDDSVIFMPGTGKVLRY-----QRAT 843
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQ------------------YGNTIC 162
RDK M I+T P +N + N + T+ + + + +G+
Sbjct: 844 RDK---MVILTINTPVINVAANATIHTVHTLSSELEKAAAKFELDATFSDVVGSFGDDTS 900
Query: 163 EEVELNKAQWSALFEPYLFFESYRNYLQVDIV--AANADDLLAWKGWVESRLRQLTLMIE 220
+E+ + + F Y Y++VD+ N A GWVESRL L + +
Sbjct: 901 KEIPIGVNE---------FLGGYNRYIKVDVQFWGLNRQGGRALVGWVESRLVGLLVELG 951
Query: 221 RDTYGKLQCHPYPHEYVDT 239
R T G L +P + +T
Sbjct: 952 RQTPG-LDARIWPGRFHET 969
>gi|349805727|gb|AEQ18336.1| putative poly polymerase alpha [Hymenochirus curtipes]
Length = 183
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 62/86 (72%), Gaps = 7/86 (8%)
Query: 8 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 67
D +RSLNGCRV D+IL LVPN +F +TLR +K WAKRRG+YS LGG +WA+LV
Sbjct: 1 DIRCIRSLNGCRVTDEILHLVPN--NFRSTLRAIKLWAKRRGIYSTF-RILGG-SWAMLV 56
Query: 68 ARVCQLYPNAVPSMLVSRFFRVYTMW 93
AR CQLY NA+ S LV +F+ +MW
Sbjct: 57 ARTCQLY-NAIASTLVHKFY--VSMW 79
>gi|320166045|gb|EFW42944.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1251
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 35/237 (14%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPN--VEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
L +D +L G D ++ +P + F + LR +K WA RG+YSN GFLGG
Sbjct: 918 LKAMDSTAQLTLQGWLENDALVNAIPQPLLSTFRSLLRRVKQWALARGIYSNAAGFLGGF 977
Query: 62 NWALLVAR-VCQLYPNAV----------PSM-LVSRFFRVYTMWRWPNPVML-----CAI 104
+W++LVA + + P+ + P + L+ FF W WP P++L +
Sbjct: 978 SWSVLVAHFMVKTKPSPLGDEDQDSTGRPLLALMHAFFVHVANWPWPQPILLNMPLGATL 1037
Query: 105 DEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE 164
+G SV MP++TP +P NS+ VS STL VM + Q G +
Sbjct: 1038 PADAIGESV-------------MPVMTPTWPTRNSARVVSVSTLSVMRAELQRGADLTAA 1084
Query: 165 VELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 221
+ + A A+ +P + L V + N +L GW+ SRL L +ER
Sbjct: 1085 ADCSLA---AVADPLGVSTLAKGILVVQLQCLNKSELERGAGWLLSRLGVLVHELER 1138
>gi|212536855|ref|XP_002148583.1| DUF455 domain protein [Talaromyces marneffei ATCC 18224]
gi|210068325|gb|EEA22416.1| DUF455 domain protein [Talaromyces marneffei ATCC 18224]
Length = 1206
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 116/242 (47%), Gaps = 20/242 (8%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
D+ ++ LN R + + + +P++ F R +K WAK RG+YS+ G+LGG++ L
Sbjct: 741 DLPMQSLLKLNSHRDLEYLQRTIPDLATFRKAYRFIKAWAKFRGIYSSKLGYLGGIHITL 800
Query: 66 LVARVCQLYPNAVPSM----LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
L+ARVC+L + ++S FF Y + W N ++ E F P+ +R
Sbjct: 801 LLARVCKLSFREAGATSVSDIISDFFFYYENFDWKNDMVY------ETTFYTGTPKYHRL 854
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP--- 178
+ M I++ P +N ++ + S++ + +F+ + EV A W + +P
Sbjct: 855 SR-EPMVILSIHPPKVNVAHASTVSSVHTLEQEFKRAAQLISEV---GATWKNIADPSGV 910
Query: 179 YLFFESYRNYLQVDI--VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 236
F E+Y +Y++VD+ A A A GW+E R L + I R + + +P +
Sbjct: 911 VQFLEAYSSYIKVDVHYWAKAAAKGRALFGWLEFRCVSLLVNINRG-FPDIHARIWPARF 969
Query: 237 VD 238
D
Sbjct: 970 TD 971
>gi|238492513|ref|XP_002377493.1| poly(A) polymerase pla1, putative [Aspergillus flavus NRRL3357]
gi|220695987|gb|EED52329.1| poly(A) polymerase pla1, putative [Aspergillus flavus NRRL3357]
Length = 1297
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 43/278 (15%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
D+ ++ LN R + + +P++ F R +K WA+RRG+YS+ G+LGG++ L
Sbjct: 735 DLPMQSLLKLNSLRDMHYLQRTIPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITL 794
Query: 66 LVARVCQLYPNAVPSM----LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
L+AR+C L ++ +++ FF+ Y + W V V+DP +
Sbjct: 795 LLARICTLSFRQAGTISAADIITTFFKHYAQFNWEKQV-------------VYDPSFYKS 841
Query: 122 DKTHHMP------IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSAL 175
+ P I++ P +N + S + R ++ +FQ + + + ++ Q +
Sbjct: 842 PPRYFRPQREPLVILSQHQPKVNVARAASIPSTRTLVQEFQRADKLLSQQDVTWEQLAGS 901
Query: 176 FEPYL----FFESYRNYLQVDIV----AANADDLLAWKGWVESRLRQLTLMIERDTYGKL 227
E F +SYR+Y +V++ AA +L GW+E R L + I R + +
Sbjct: 902 IENSTGADEFLKSYRSYAKVNVQYWGGAATKGRMLV--GWLEWRCVSLLVDIHRK-FPDI 958
Query: 228 QCHPYPHEYVD------TSKPCAHCAFFMGLQRK--PG 257
+P + D T+K C + +GL R+ PG
Sbjct: 959 HARIWPARFTDMEEVGETTKEYQGC-YLIGLTRESTPG 995
>gi|317156627|ref|XP_001825892.2| poly(A) polymerase pla1 [Aspergillus oryzae RIB40]
Length = 1195
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 43/278 (15%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
D+ ++ LN R + + +P++ F R +K WA+RRG+YS+ G+LGG++ L
Sbjct: 735 DLPMQSLLKLNSLRDMHYLQRTIPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITL 794
Query: 66 LVARVCQLYPNAVPSM----LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
L+AR+C L ++ +++ FF+ Y + W V V+DP +
Sbjct: 795 LLARICTLSFRQAGTISAADIITTFFKHYAQFNWEKQV-------------VYDPSFYKS 841
Query: 122 DKTHHMP------IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSAL 175
+ P I++ P +N + S + R ++ +FQ + + + ++ Q +
Sbjct: 842 PPRYFRPQREPLVILSQHQPKVNVARAASIPSTRTLVQEFQRADKLLSQQDVTWEQLAGS 901
Query: 176 FEPYL----FFESYRNYLQVDIV----AANADDLLAWKGWVESRLRQLTLMIERDTYGKL 227
E F +SYR+Y +V++ AA +L GW+E R L + I R + +
Sbjct: 902 IENSTGADEFLKSYRSYAKVNVQYWGGAATKGRMLV--GWLEWRCVSLLVDIHR-KFPDI 958
Query: 228 QCHPYPHEYVD------TSKPCAHCAFFMGLQRK--PG 257
+P + D T+K C + +GL R+ PG
Sbjct: 959 HARIWPARFTDMEEVGETTKEYQGC-YLIGLTRESTPG 995
>gi|300123436|emb|CBK24709.2| unnamed protein product [Blastocystis hominis]
Length = 363
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 118/258 (45%), Gaps = 16/258 (6%)
Query: 3 VLNDVDEPTVRSLNGCRVAD---QILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLG 59
+L +V E T+ SL GCR + Q L+ ++ F T ++F+ K+ +Y NV G+LG
Sbjct: 45 ILRNVSEHTLHSLTGCRCTEFVIQKLRSENKLDIFRQTFFGIRFFTKQYKIYKNVMGYLG 104
Query: 60 GVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSV--WDPR 117
GVN +L+A L N + F V M + ELGF W +
Sbjct: 105 GVNITILLAS-TNLLENDFLTNTFHFFHFVADHLGSEIIAMTPQLSFPELGFDEENWSDK 163
Query: 118 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF- 176
+ + ++TP YP MN++ +S S+L+ + Q + E+++ S L
Sbjct: 164 PSNFSNHDSLVLLTPTYPRMNTARTISRSSLQFIRSQ---ARRVYEKIKSYVDGESTLLQ 220
Query: 177 --EPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH 234
EPY FFE + Y +V + A+ + W G VES++R L + + +P P
Sbjct: 221 MVEPYQFFEGFPIYFEVLVSASANSEFKDWLGLVESKIRYLVFFLSLRI-ENVALNPNP- 278
Query: 235 EYVDTSKPCAHCAFFMGL 252
V S A C F++GL
Sbjct: 279 -IVSKSNSNAAC-FYIGL 294
>gi|71657771|ref|XP_817395.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70882585|gb|EAN95544.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 406
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 21/163 (12%)
Query: 74 YPNAVPSMLVSRFFRVYTMWRWPNP---------VMLCAIDEAELGFSV-WDPRKNRRDK 123
+PN + +V RFFR+Y W PNP + L + WDPR+++ D
Sbjct: 5 HPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRGWDPRESKSDA 64
Query: 124 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-----------W 172
P++TPA P N+ +NV+ + LR + +F G+ IC + A+ W
Sbjct: 65 MALFPVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPHGIW 124
Query: 173 SALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 215
S L EP FF ++ YL V + +A+ + VES++R L
Sbjct: 125 SRLLEPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESKIRFL 167
>gi|294867702|ref|XP_002765194.1| hypothetical protein Pmar_PMAR025535 [Perkinsus marinus ATCC 50983]
gi|239865189|gb|EEQ97911.1| hypothetical protein Pmar_PMAR025535 [Perkinsus marinus ATCC 50983]
Length = 602
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 143/341 (41%), Gaps = 75/341 (21%)
Query: 7 VDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 66
VD+ T+RSLNG RV +LK P + + LR +K WAK RG+YSNV G+ GGV WA+L
Sbjct: 217 VDDATIRSLNGVRVGRYLLKRTPVLAVYRVVLRFVKMWAKARGIYSNVMGYFGGVTWAIL 276
Query: 67 VARVCQ---------LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGF------ 111
V++V Q +AV +L+ +FF + W + + A DE GF
Sbjct: 277 VSKVMQDNAELAMRETEEDAVREILL-KFFDFCSTHPWGSENPVTANDEILNGFVSAGSV 335
Query: 112 --------------SVWD----PRKNRRD-------------KTHHMPIITPAYPCMNSS 140
V D P+ RD + M ++TP P NSS
Sbjct: 336 EMYTPPARDIFGDDDVVDKQLAPQHVLRDPAECPYAADGVGIEGQCMVVLTPVLPTQNSS 395
Query: 141 YNVSTSTLRVMMDQFQYGNTICEEVELNKA----QWSALFEPYLFFESYRNYLQVDI--- 193
+N VM+ +F+ + L+ + A+ F Y+ L V++
Sbjct: 396 FNALDFNRYVMVQEFKRAAHMLSLFALSPQSCPFRLGAVCARVHPFRLYKRLLFVEVEIR 455
Query: 194 -----VAANADDLLAWK---GWVESRLRQLTLMI-----ERDTYGKLQCHPYPHEYVDTS 240
+N D L K VES++R T + E TY L+ +P+P +
Sbjct: 456 PENQRTLSNDDVHLLQKRIAAMVESKVRIFTKLSAAAFHEEGTY--LRLYPHPQVTQPWT 513
Query: 241 KPCAHCAFFMGL-QRKPGEVVQEGQ-----QFDIRGSVEEF 275
AF +GL R GE E + + D+R S++EF
Sbjct: 514 ASGGGIAFLIGLASRLTGEENIEREEETHGKVDLRPSLQEF 554
>gi|407410523|gb|EKF32925.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi marinkellei]
Length = 285
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 110/243 (45%), Gaps = 32/243 (13%)
Query: 47 RRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWR----WPNPVMLC 102
RR VY N+ + GV A++VARVCQ+ P + P++L+ FF Y W +PV +
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARVCQVMPASHPNVLLRFFFLFYAQWLSRHDRISPVYIT 61
Query: 103 AIDEAELGF----SVWDPRKNR-RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQY 157
E+ WDPR++ RD +P+I PAYP +N + NVS L V + Y
Sbjct: 62 TSLESRGRIPGLPDSWDPRRDACRDDL--LPVINPAYPYVNDARNVSRCGLEVFYAELTY 119
Query: 158 GNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD------LLAWKGWVESR 211
+ + E +++P+ ++Y + V++ + L W +V S+
Sbjct: 120 AHRLLSNSE---TPLETIWKPFNILDNYSTFFVVNVTCEEETEEKLEAVLSVWSSYVLSK 176
Query: 212 LRQLTLMIERDTYGKLQCHPYPHEYVDT---SKPCAHC-----AFFMGLQRKPGEVVQEG 263
LR L +ER + PYP + D S P + C +F +G++ K G +
Sbjct: 177 LRILLYALER----IVDARPYPQKLNDVPLRSVPKSGCFLKGSSFIVGIREKVGRRFPQK 232
Query: 264 QQF 266
F
Sbjct: 233 NMF 235
>gi|407849942|gb|EKG04508.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi]
Length = 285
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 107/243 (44%), Gaps = 32/243 (13%)
Query: 47 RRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWR----WPNPVMLC 102
RR VY N+ + GV A++VAR+CQ+ P + P++L+ FF YT W +PV +
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVLLRFFFLFYTQWLSRHDRISPVYIT 61
Query: 103 AIDEAELGF----SVWDPRKNR-RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQY 157
E+ WDPR++ RD +P+I PAYP +N + NV +L V + Y
Sbjct: 62 TSLESRGRIPGLPDSWDPRRDACRDDL--LPVINPAYPYVNDARNVGRCSLEVFYAELTY 119
Query: 158 GNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD------LLAWKGWVESR 211
+ +E ++EPY + Y + V + ++ L W +V S+
Sbjct: 120 AYRLLSNLE---TPLETIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSK 176
Query: 212 LRQLTLMIERDTYGKLQCHPYPHEYVD--------TSKPCAHCAFFMGLQRKPGEVVQEG 263
LR L +ER + PYP + D + + F +G++ K G +
Sbjct: 177 LRILLYALER----LVDARPYPQKLNDGPPRSVPKSGRFLKGSCFIVGIKEKVGRRFPQK 232
Query: 264 QQF 266
F
Sbjct: 233 NLF 235
>gi|367022686|ref|XP_003660628.1| hypothetical protein MYCTH_2299149 [Myceliophthora thermophila ATCC
42464]
gi|347007895|gb|AEO55383.1| hypothetical protein MYCTH_2299149 [Myceliophthora thermophila ATCC
42464]
Length = 1260
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 39/249 (15%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
T+ L R AD + + VP++ F R +K WAK RG+Y+ GFL G+ ++L+ARV
Sbjct: 787 TLSKLKAIRDADYLRRSVPDLTTFRLAHRFVKTWAKSRGIYAARFGFLSGIQISVLLARV 846
Query: 71 CQLYPNAV-----PSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR---- 121
+L P L+ FF Y + W A+L F DP +RR
Sbjct: 847 QKLLAREAGAPPTPEALIVTFFHHYAAFDW----------SAQLAF---DPLFHRRRLPY 893
Query: 122 DKTHHMPIITPAY--PCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 179
+T P+ Y P +N++ S + + + +F+ + A WS+L
Sbjct: 894 SRTAREPLAILGYFPPALNTALAASVPSTKTLAAEFRRASDALRSATDPPASWSSLLSVS 953
Query: 180 L----FFESYRNYLQVDI------VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQC 229
F +Y++Y+++D+ ++ A L GW+ESR L + + R G L
Sbjct: 954 AGRDEFLAAYKSYVKLDVQYWGLSLSRGAQFL----GWLESRCVMLLVDLHRRAPG-LHV 1008
Query: 230 HPYPHEYVD 238
+P +V+
Sbjct: 1009 RMWPARFVE 1017
>gi|71409419|ref|XP_807056.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70870970|gb|EAN85205.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 285
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 106/243 (43%), Gaps = 32/243 (13%)
Query: 47 RRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWR----WPNPVMLC 102
RR VY N+ + GV A++VAR+CQ+ P + P++L+ FF YT W +PV +
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVLLRFFFLFYTQWLSRHDRISPVYIT 61
Query: 103 AIDEAELGF----SVWDPRKNR-RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQY 157
E+ WDPR++ RD +P+I PAYP +N + NV L V + Y
Sbjct: 62 TSLESRGRIPGLPDSWDPRRDACRDDL--LPVINPAYPYVNDARNVGRCGLEVFYAELTY 119
Query: 158 GNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD------LLAWKGWVESR 211
+ +E ++EPY + Y + V + ++ L W +V S+
Sbjct: 120 AYRLLSNLE---TPLETIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSK 176
Query: 212 LRQLTLMIERDTYGKLQCHPYPHEYVD-----TSKP---CAHCAFFMGLQRKPGEVVQEG 263
LR L +ER + PYP + D KP F +G++ K G +
Sbjct: 177 LRILLYALER----IVDARPYPQKLNDVPPRSVPKPGRFLKGSCFIVGIKEKVGRRFPQK 232
Query: 264 QQF 266
F
Sbjct: 233 NMF 235
>gi|391865116|gb|EIT74407.1| hypothetical protein Ao3042_09684 [Aspergillus oryzae 3.042]
Length = 973
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 110/247 (44%), Gaps = 44/247 (17%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
D+ ++ LN R + + +P++ F R +K WA+RRG+YS+ G+LGG++ L
Sbjct: 735 DLPMQSLLKLNSLRDMHYLQRTIPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITL 794
Query: 66 LVARVCQLYPNAVPSM----LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
L+AR+C L ++ +++ FF+ Y + W V V+DP +
Sbjct: 795 LLARICTLSFRQAGTISAADIITTFFKHYAQFNWEKQV-------------VYDPSFYKS 841
Query: 122 DKTHHMP------IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSAL 175
+ P I++ P +N + S + R ++ +FQ + + + ++ Q +
Sbjct: 842 PPRYFRPQREPLVILSQHQPKVNVARAASIPSTRTLVQEFQRADKLLSQQDVTWEQLAGS 901
Query: 176 FEPYL----FFESYRNYLQVDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGK 226
E F +SYR+Y +V++ A L+ W W R ++L++ R
Sbjct: 902 IENSTGADEFLKSYRSYAKVNVQYWGGAATKGRMLVGWLEW-----RCVSLLVGR----- 951
Query: 227 LQCHPYP 233
HP P
Sbjct: 952 --LHPLP 956
>gi|334121414|ref|ZP_08495483.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
gi|333455032|gb|EGK83696.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
Length = 1034
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 106/251 (42%), Gaps = 48/251 (19%)
Query: 17 GCRVADQILKLV-PNV--EHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA----- 68
G AD I+ +V P++ + F LR ++ WAK R ++ N GFLG +WALL A
Sbjct: 734 GILEADLIVDIVSPHLSWDLFTNLLRAVRTWAKARQIHGNAWGFLGNFSWALLTAWTSIQ 793
Query: 69 ---------RVCQ-----------------LYPNAVPSMLVSRFFRVYTMWRWPNPVMLC 102
R+ L + + +L++ FF++ + W P+ L
Sbjct: 794 CGDITPDSPRLLHSQENDGFVGAVSPCPPCLRDDQLLDILLAHFFQILSQHDWTQPIALT 853
Query: 103 AIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTIC 162
G + RK+R P+IT PC NS+ NV+ ST ++ + G I
Sbjct: 854 E------GGKQYPVRKSR----EWFPVITSIEPCQNSTRNVTRSTAEILRRELGRGAEIA 903
Query: 163 EEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERD 222
EEV W+ LFE E +L + + +A +L GW+E L + +E+
Sbjct: 904 EEVLAGNTAWTTLFESADLPEQSNAFLVLTVSSAEVGELEKCGGWLEGNTIGLAINLEQ- 962
Query: 223 TYGKLQCHPYP 233
KL H P
Sbjct: 963 ---KLNIHVRP 970
>gi|189194681|ref|XP_001933679.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979243|gb|EDU45869.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1151
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 116/261 (44%), Gaps = 45/261 (17%)
Query: 24 ILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP----NAVP 79
I + +P++ F RC+K WA +RG+YS GFLGGV+ L+++ +C+ +A
Sbjct: 699 IQRTLPSLSSFRLAYRCIKLWAVQRGLYSAKFGFLGGVHITLMLSWICKRLAYDSGSASA 758
Query: 80 SMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 139
+ LV+ FF Y + W N ++ ++ F PR NR + M ++ P N
Sbjct: 759 ADLVTSFFHHYGQFDWTNEMVY------DVFFHKKRPRYNRSAR-EPMVVLGFHAPNSNI 811
Query: 140 SYNVSTSTLRVMMDQFQ-YGNTICEEVELNKAQWSALF----------EPYL----FFES 184
++ + L+ ++ +F+ G +CE+ W A F P L F E+
Sbjct: 812 AHTSTVPGLQTLVKEFKAAGERLCEQ----GMTWDAFFGLGPTLSSVSSPSLGAAGFLET 867
Query: 185 YRNYLQVDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 239
Y N+++VDI L+ GWVESR L + I + T + +P + +
Sbjct: 868 YHNFVKVDIQFWGRTLTKGKSLV---GWVESRCISLIVEIHK-TLPNSEVRIWPGRFTNN 923
Query: 240 SKPCA------HCAFFMGLQR 254
A H + +GL +
Sbjct: 924 ETSAADESRDYHGCYLIGLSK 944
>gi|403331436|gb|EJY64664.1| Poly(A) polymerase [Oxytricha trifallax]
Length = 1239
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 104/256 (40%), Gaps = 66/256 (25%)
Query: 59 GGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVML------CAIDEAELGFS 112
GGV++A+LVA++CQ + ++ +FF VY W+W +PV +
Sbjct: 268 GGVSYAILVAKICQDNTDLYLCDIIYKFFEVYADWKWFDPVFIRVGKKKDKTKLDLNKLQ 327
Query: 113 VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV------- 165
V D MPI+TP NS+Y V + T + +F G + +E+
Sbjct: 328 VLDAY-----SQDIMPILTPNTNPKNSAYRVCSHTFDTICKEFTRGKNLMKELIPQSQKT 382
Query: 166 ------------------------------------------ELNKAQWSALFEPYLFFE 183
+ K W LF+ + FF+
Sbjct: 383 IKPHPAALAKLALDQEETKLTVDALQIQESNQESQVQSPVQKQKQKQSWIKLFQKFRFFD 442
Query: 184 SYRNYLQVDIVAANADDLLAWKGWVESRLRQL-TLMIERDTYGKLQCHPYP---HEYVDT 239
Y ++L++DI++ + L W G+VES+LR+L L+ + + L+ +P E DT
Sbjct: 443 QYEHFLKIDILSTDESAHLKWLGYVESQLRRLMQLLQDIEQISGLRIYPRSFNREETQDT 502
Query: 240 SKPCAHC--AFFMGLQ 253
C ++F+G++
Sbjct: 503 INNAFKCCDSYFIGIK 518
>gi|9453842|dbj|BAB03277.1| poly A polymerase [Drosophila melanogaster]
Length = 255
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 46/60 (76%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++D +VRSLNGCRV D+IL LVPN+E+F LR +K WAK+ G+YSN G+ GGV
Sbjct: 196 NLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 255
>gi|62088188|dbj|BAD92541.1| poly(A) polymerase gamma variant [Homo sapiens]
Length = 382
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 91/183 (49%), Gaps = 8/183 (4%)
Query: 150 VMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVE 209
VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++ L W G VE
Sbjct: 3 VMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVE 62
Query: 210 SRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF----FMGL---QRKPGEVVQE 262
S++R L +ER+ + L H P + + + F+G+ + + E V
Sbjct: 63 SKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRVENAESVNI 121
Query: 263 GQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ 322
+DI+ + N K GM+I +H+++KQ+ Y+ E ++ + L+
Sbjct: 122 DLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVN 181
Query: 323 RSS 325
RSS
Sbjct: 182 RSS 184
>gi|327357117|gb|EGE85974.1| DUF455 domain-containing protein [Ajellomyces dermatitidis ATCC
18188]
Length = 1251
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 138/324 (42%), Gaps = 63/324 (19%)
Query: 26 KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM---- 81
+ VPN F R +K WAK RG+YS+ G+LGG++ +++++V +L P+ P+
Sbjct: 798 RTVPNPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPATSAAD 857
Query: 82 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH------MPIITPAYP 135
++ FF Y + W VM +DP +++ +H M I+T P
Sbjct: 858 ILCTFFNYYGNFNWKEDVM-------------YDPSFHKKPPRYHRTPQEGMVILTLHAP 904
Query: 136 CMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY----------LFFESY 185
MN + + S + R ++D+ + + + E N A+ + F SY
Sbjct: 905 VMNVARSASIPSTRTIVDEMKRADNLISEGNTNWAELVGIVANTGKSSLSVSGDEFLRSY 964
Query: 186 RNYLQVDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV--- 237
+Y+++++ A L+ GW+ESR L + R + +Q +P +
Sbjct: 965 NSYIKINVQYWGLSLAKGSSLV---GWLESRCLVLLADLHR-KFPDIQTRIWPARFTQIE 1020
Query: 238 --DTSKPCA-----HCAFFMGLQRK-----PGEVVQEGQQF----DIRGSVEEFKLSINM 281
D S P + +GL + P + + + ++ S+++F +I+
Sbjct: 1021 DHDDSTPAQEEREYQGCYLIGLTKAEHATDPTRTLSKSDRKLAHDTLQASIDQFASNIHN 1080
Query: 282 Y--MFWKPGMEICVSHIRRKQIPP 303
Y F + VSH+++ + P
Sbjct: 1081 YKKYFDSASAWVDVSHVKQGNLGP 1104
>gi|258563048|ref|XP_002582269.1| predicted protein [Uncinocarpus reesii 1704]
gi|237907776|gb|EEP82177.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1040
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 28/212 (13%)
Query: 15 LNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL- 73
L R D I + +P++ F R + WAKRRG+Y G+LGG++ ++++RVC+L
Sbjct: 775 LQAFRDVDYIRRSIPDLAAFRAAHRFITLWAKRRGIYLARFGYLGGIHITMMLSRVCKLS 834
Query: 74 -YPNAVPSM-LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIIT 131
SM ++ RFF+ YT + W + LC D + D + RR M I+T
Sbjct: 835 CRKGGATSMDMICRFFKYYTNFDWEREI-LC--DPSFFK----DAPRYRRYANEPMVILT 887
Query: 132 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL-------FFES 184
P +N + + S ++ R ++ + Q + + +++ WS L F ++
Sbjct: 888 IHTPLVNIARSASKASTRTIIKELQRMDELISTPDMS---WSGLVGNITASDSSQEFLKT 944
Query: 185 YRNYLQVDI-----VAANADDLLAWKGWVESR 211
Y +Y+++ + + A LL GW+ESR
Sbjct: 945 YTSYIKIHVQYWGMILAKGSTLL---GWLESR 973
>gi|330926264|ref|XP_003301394.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
gi|311323960|gb|EFQ90506.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
Length = 1230
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 114/261 (43%), Gaps = 45/261 (17%)
Query: 24 ILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP----NAVP 79
I + +P+ F RC+K WA +RG+YS GFLGGV+ L+++ VC+ +A
Sbjct: 778 IQRTLPSPSSFRLAYRCIKLWAVQRGLYSAKFGFLGGVHITLMLSWVCKRLAYDSGSASA 837
Query: 80 SMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 139
+ LV+ FF Y + W N ++ ++ F PR NR + M ++ P N
Sbjct: 838 ADLVASFFHHYGQFDWTNDMVY------DVFFHKKRPRYNRSTR-EPMVVLGFHTPNSNI 890
Query: 140 SYNVSTSTLRVMMDQFQYGNT-ICEEVELNKAQWSALFEP--------------YLFFES 184
++ + L++++ +F+ + +CE W A F P F E+
Sbjct: 891 AHTSTMPGLQILVKEFKAADKRLCEP----GMTWDAFFGPGSTLSPVSSPSLGAAGFLET 946
Query: 185 YRNYLQVDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 239
Y+N+++VDI L+ GWVESR L + I + K + +P + D
Sbjct: 947 YQNFVKVDIQFWGRTLTKGKSLV---GWVESRCISLIVEIHK-ALPKSEVRIWPGRFTDN 1002
Query: 240 SKPCA------HCAFFMGLQR 254
A H + + L +
Sbjct: 1003 ETNVADQSKDYHGCYLISLSK 1023
>gi|340959918|gb|EGS21099.1| hypothetical protein CTHT_0029400 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1213
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 109/261 (41%), Gaps = 48/261 (18%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
D+ ++ L R D + + VPN+ F R ++ WAK RGVY++ GFL G+ A+
Sbjct: 761 DLSPQSLLKLKAVRDMDYLRRTVPNIRVFRAANRAIRAWAKARGVYTSRFGFLSGIQIAI 820
Query: 66 LVARVCQLYPN--------AVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 117
LVARV +L N V LV+ FF Y + W L F DP
Sbjct: 821 LVARVAKLLANNPDVKTPITVEDFLVT-FFTHYASFPW----------STHLAF---DPF 866
Query: 118 KNRRDKTHHM-----PIITPAY--PCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKA 170
+R ++ PI Y P +N++ S S+ R + D+F+ V N
Sbjct: 867 FHRNRLPYNRVPFREPIAILGYFPPALNTAAAASPSSARTLADEFRRAGEAL--VSGNVT 924
Query: 171 QWSALFEPY---------LFFESYRNYLQVD-----IVAANADDLLAWKGWVESRLRQLT 216
W+ F +Y+ Y+++D + + L GW+ESRL L
Sbjct: 925 DWAFFLSGTGSNGTTGVQEFLSAYKTYIRLDASYWGLSRSRGSQFL---GWLESRLVSLL 981
Query: 217 LMIERDTYGKLQCHPYPHEYV 237
+ I R T G L +P +V
Sbjct: 982 VDISRRTNGVLHARIWPARFV 1002
>gi|46805331|dbj|BAD16850.1| unknown protein [Oryza sativa Japonica Group]
Length = 62
Score = 79.7 bits (195), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 37/43 (86%)
Query: 38 LRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPS 80
LRC+K WAK RGVYSNV GFLGG+ WA+LVARVCQLYPN P+
Sbjct: 2 LRCVKHWAKARGVYSNVAGFLGGIGWAILVARVCQLYPNTSPA 44
>gi|327293125|ref|XP_003231259.1| hypothetical protein TERG_08045 [Trichophyton rubrum CBS 118892]
gi|326466375|gb|EGD91828.1| hypothetical protein TERG_08045 [Trichophyton rubrum CBS 118892]
Length = 1216
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 113/257 (43%), Gaps = 37/257 (14%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
D+ ++ L R + I ++VP++ F RC+ WAK GVYS+ G LGG++ +
Sbjct: 746 DLSLHSLSKLQPYRDQEYIKRMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITM 805
Query: 66 LVARVCQL----YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
++ R+ QL + LV+ FF Y + W N +++ + + RR
Sbjct: 806 MLCRLHQLIHEKFGRVTVPELVAMFFHHYAHFDWKNNMVVSPGVQT----------RYRR 855
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY-- 179
M I+T P +N + V+T +LR ++ F+ + E + A+WS +
Sbjct: 856 SLREPMVILTVHAPTINVARAVTTPSLRTIVSAFKRAEELMGE---DGAKWSNILNDISI 912
Query: 180 ---------LFFESYRNYLQVDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYG 225
F +Y++Y++V++ A L+ GW+ESR +L ++R G
Sbjct: 913 SHNNQTGAEKFLAAYKSYIKVNVQYWGPSPTQASSLI---GWLESRFFRLLNDLDRQVLG 969
Query: 226 KLQCHPYPHEYVDTSKP 242
+ +P + P
Sbjct: 970 -IHGRIWPARFTSIDAP 985
>gi|56785136|dbj|BAD81791.1| unknown protein [Oryza sativa Japonica Group]
Length = 62
Score = 79.3 bits (194), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/43 (74%), Positives = 37/43 (86%)
Query: 38 LRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPS 80
LRC+K WAK RGVYSNV GFLGG+ WA+LVAR+CQLYPN P+
Sbjct: 2 LRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPA 44
>gi|115401228|ref|XP_001216202.1| predicted protein [Aspergillus terreus NIH2624]
gi|114190143|gb|EAU31843.1| predicted protein [Aspergillus terreus NIH2624]
Length = 1168
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 33/260 (12%)
Query: 15 LNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL- 73
LN R + + +P++ F + R +K WA+RRGVYS G+LGG++ LL++ VC+L
Sbjct: 715 LNPLRDMHYLQRTIPDLATFRSAYRFIKTWAQRRGVYSAKLGYLGGIHITLLLSSVCKLS 774
Query: 74 YPNAVP---SMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 130
+ A P + ++ FFR Y ++W ++ + GF PR R + + I+
Sbjct: 775 FQKAGPLSAADMICTFFRHYAQFQWDRTIVY------DPGFYKTAPRYFRTSR-EPIVIL 827
Query: 131 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL-------FFE 183
T P +N + S + R + +F+ + E+ W+ L F
Sbjct: 828 TQNTPKVNVARAASLPSARTLEQEFKRMDRQLASPEIT---WAGLLGAAGSSSGVEDFLT 884
Query: 184 SYRNYLQVDI----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 239
SY +Y +V++ A LL GW+E R L + I+R + L +P + D
Sbjct: 885 SYPSYAKVNVQYWGAGAAKGRLLV--GWLEWRCVSLLVDIQR-RFPDLHARIWPARFTDM 941
Query: 240 SKPCA-----HCAFFMGLQR 254
+ F +GL R
Sbjct: 942 EEASESEGEYQGCFLIGLTR 961
>gi|83774635|dbj|BAE64758.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 457
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 45/261 (17%)
Query: 26 KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM---- 81
+ +P++ F R +K WA+RRG+YS+ G+LGG++ LL+AR+C L ++
Sbjct: 6 RTIPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAAD 65
Query: 82 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP------IITPAYP 135
+++ FF+ Y + W V V+DP + + P I++ P
Sbjct: 66 IITTFFKHYAQFNWEKQV-------------VYDPSFYKSPPRYFRPQREPLVILSQHQP 112
Query: 136 CMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL----FFESYRNYLQV 191
+N + S + R ++ +FQ + + + ++ Q + E F +SYR+Y +V
Sbjct: 113 KVNVARAASIPSTRTLVQEFQRADKLLSQQDVTWEQLAGSIENSTGADEFLKSYRSYAKV 172
Query: 192 DIV----AANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC- 246
++ AA +L GW+E R ++L++ G+L P ++ P H
Sbjct: 173 NVQYWGGAATKGRMLV--GWLEWRC--VSLLV-----GRLHPLPTFQRHIHRKFPDIHAR 223
Query: 247 ---AFFMGLQRKPGEVVQEGQ 264
A F ++ + GE +E Q
Sbjct: 224 IWPARFTDME-EVGETTKEYQ 243
>gi|261191320|ref|XP_002622068.1| DUF455 domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239589834|gb|EEQ72477.1| DUF455 domain-containing protein [Ajellomyces dermatitidis SLH14081]
Length = 1266
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 137/324 (42%), Gaps = 63/324 (19%)
Query: 26 KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVP----SM 81
+ VPN F R +K WAK RG+YS+ G+LGG++ +++++V +L P+ P +
Sbjct: 798 RTVPNPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPVTSAAD 857
Query: 82 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH------MPIITPAYP 135
++ FF Y + W VM +DP +++ +H M I+T P
Sbjct: 858 ILCTFFNYYGNFNWKEDVM-------------YDPSFHKKPPRYHRTPQEGMVILTLHAP 904
Query: 136 CMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY----------LFFESY 185
MN + + S + R ++D+ + + + E N A+ + F SY
Sbjct: 905 VMNVARSASIPSTRTIVDEMKRADNLISEGNTNWAELVGIVANTGKSSLSVSGDEFLRSY 964
Query: 186 RNYLQVDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV--- 237
+Y+++++ A L+ GW+ESR L + R + +Q +P +
Sbjct: 965 NSYIKINVQYWGLSLAKGSSLV---GWLESRCLVLLADLHR-KFPDIQTRIWPARFTQIE 1020
Query: 238 --DTSKPCA-----HCAFFMGLQRK-----PGEVVQEGQQF----DIRGSVEEFKLSI-- 279
D S P + +GL + P + + + ++ S+++F +I
Sbjct: 1021 DHDDSTPAQEEREYQGCYLIGLTKAEHATDPTRTLSKSDRKLAHDTLQASIDQFASNIHN 1080
Query: 280 NMYMFWKPGMEICVSHIRRKQIPP 303
+ F + VSH+++ + P
Sbjct: 1081 DKKYFDSASAWVDVSHVKQGNLGP 1104
>gi|315043460|ref|XP_003171106.1| DUF455 domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311344895|gb|EFR04098.1| DUF455 domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 1217
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 115/260 (44%), Gaps = 43/260 (16%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
D+ ++ L R + I ++VP++ F RC+ WAK GVY++ G LGG++ +
Sbjct: 747 DLSLHSLSKLQPYRDQEYIKRMVPDMNVFRLAHRCITQWAKSSGVYTSKFGLLGGIHITM 806
Query: 66 LVARVCQLYPNAVPSM----LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+++R+ QL V + LV+ FF Y + W N +++ ++ + RR
Sbjct: 807 MLSRLHQLLHGKVGRVTIPELVAMFFHHYAHFDWKNSMVVSPGVQS----------RYRR 856
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE---- 177
M I+T P +N + V+ +LR + F+ + E N A+WS +
Sbjct: 857 SMREPMVILTVHVPTVNVARAVTAHSLRTIASAFKRAEELLAE---NGARWSNILRDTSI 913
Query: 178 -------PYLFFESYRNYLQVDI-----VAANADDLLAWKGWVESRLRQLTLMIERD--- 222
F ++ +Y++V++ A L+ GW+ESR +L ++R
Sbjct: 914 SHNKETGAEKFLGAHNSYIKVNVQYWGPSPTQASSLV---GWIESRFFRLLNDLDRQVPG 970
Query: 223 TYGKLQCHPYPHEYVDTSKP 242
YG++ +P + P
Sbjct: 971 VYGRI----WPARFTSKDSP 986
>gi|403371755|gb|EJY85762.1| hypothetical protein OXYTRI_16252 [Oxytricha trifallax]
Length = 771
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 93/223 (41%), Gaps = 56/223 (25%)
Query: 8 DEPTVRSLNGCRVADQILKLVP----NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
D + S+N + +I LV N E F L+ +K WA+RR VY G+LGG+ +
Sbjct: 461 DNQSEVSINAVIQSQEIKNLVAGCNVNFELFGLCLQHVKTWAQRRKVYGQQYGYLGGIAF 520
Query: 64 ALLVARVCQLYPNAVPSM----------------LVSRFFRVYTMWRWPNPVMLCAIDEA 107
A+L A + Q Y N M + +FF+ Y+ W WPNP++L
Sbjct: 521 AILCANIVQAYQNDDKFMCYLNDPNIKHKQKLKYFLLKFFKFYSSWEWPNPIIL------ 574
Query: 108 ELGF-------------------SVWDPRKNRRDKTHHMPIITP--------AYPCMNSS 140
+ GF +W+P D H MPII+P N++
Sbjct: 575 DQGFYDQENLLNPNGQQVKMNVKKIWNPISCIGDSQHLMPIISPQIKINTQKTITSTNTA 634
Query: 141 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSAL---FEPYL 180
V S L++ + +F+ I +++ K + L FE ++
Sbjct: 635 DQVLNSNLQIYLYEFKRAYKIMKKIYKGKIKLKELGSAFESFI 677
>gi|242810869|ref|XP_002485671.1| DUF455 domain protein [Talaromyces stipitatus ATCC 10500]
gi|218716296|gb|EED15718.1| DUF455 domain protein [Talaromyces stipitatus ATCC 10500]
Length = 1206
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 118/261 (45%), Gaps = 20/261 (7%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
D+ ++ LN R + + + +P++ F R +K WAK RG+YS+ G+LGG++ L
Sbjct: 741 DLPMQSLLKLNAVRDLEYLQRTIPDLATFRKAYRFIKAWAKCRGIYSSKLGYLGGIHITL 800
Query: 66 LVARVCQLYPN----AVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
L+A VC+L S ++ FF Y + W N ++ + + +P+ +R
Sbjct: 801 LLALVCKLSFRESGATHESDILCTFFSYYAHFDWKNDLVY------DTTYYTVEPKYHRS 854
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 181
+ + I++ P +N ++ + +++ + ++F N + + ++ + Y F
Sbjct: 855 SR-EPLVILSIHPPKVNVAHASTVPSVKTLEEEFDRANRLISKAGVSWEDIAGQTGIYQF 913
Query: 182 FESYRNYLQVDIV--AANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 239
+Y +Y++VD+ A A GW+E R L + I R + + +P + +
Sbjct: 914 LNAYPSYIKVDVQYWAKAVAKGRALFGWLEFRCVSLLVDINR-RFANVHARIWPARFTNM 972
Query: 240 SKPCA------HCAFFMGLQR 254
+ F +GL R
Sbjct: 973 KEEDTEDMEEYQGCFLIGLAR 993
>gi|344249366|gb|EGW05470.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 63
Score = 75.1 bits (183), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/60 (56%), Positives = 45/60 (75%)
Query: 127 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYR 186
MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y+
Sbjct: 1 MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYK 60
>gi|302665431|ref|XP_003024326.1| hypothetical protein TRV_01524 [Trichophyton verrucosum HKI 0517]
gi|291188376|gb|EFE43715.1| hypothetical protein TRV_01524 [Trichophyton verrucosum HKI 0517]
Length = 1216
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 36/240 (15%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
D+ ++ L R + I ++VP++ F RC+ WAK GVYS+ G LGG++ +
Sbjct: 746 DLPPHSLSELQPYRDQEYIKRMVPDMYVFRLAHRCISQWAKSSGVYSSKFGLLGGIHITM 805
Query: 66 LVARVCQLYPNAVPSM----LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+++R+ QL + LV+ FF Y + W N +++ + + RR
Sbjct: 806 MLSRLHQLIHEKCGRVTAPELVAMFFHHYAHFDWKNNMVVSPGVQT----------RYRR 855
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY-- 179
M I+T P +N + V+ +LR ++ F+ + E + A+WS +
Sbjct: 856 SLREPMVILTVHVPTINVARAVTAPSLRTIVSAFKRAEELMGE---DGARWSNILNDISI 912
Query: 180 ---------LFFESYRNYLQVDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYG 225
F +Y +Y++V++ A L+ GW+ESR +L ++R G
Sbjct: 913 SHNNQTGAEKFLAAYNSYIKVNVQYWGPSPTQASSLI---GWLESRFFRLLNDLDRQVLG 969
>gi|361066261|gb|AEW07442.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142733|gb|AFG52754.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142735|gb|AFG52755.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142737|gb|AFG52756.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142739|gb|AFG52757.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142741|gb|AFG52758.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142743|gb|AFG52759.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142745|gb|AFG52760.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142747|gb|AFG52761.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142749|gb|AFG52762.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142751|gb|AFG52763.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142753|gb|AFG52764.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142755|gb|AFG52765.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142757|gb|AFG52766.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142759|gb|AFG52767.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
Length = 104
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 43/57 (75%)
Query: 263 GQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLA 319
G+QFDIR +V+EF+ S+ MY WKPGMEI VSHI+R+ IP +VFP G + R +++
Sbjct: 1 GEQFDIRVTVDEFRHSVKMYTLWKPGMEINVSHIKRRSIPSFVFPGGVRPPRTTKMS 57
>gi|224141617|ref|XP_002324163.1| predicted protein [Populus trichocarpa]
gi|222865597|gb|EEF02728.1| predicted protein [Populus trichocarpa]
Length = 95
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 33/39 (84%)
Query: 219 IERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPG 257
IERDT G LQCHPYP+EY+D SK C HCAFFMGLQRK G
Sbjct: 6 IERDTNGMLQCHPYPNEYIDASKQCPHCAFFMGLQRKEG 44
>gi|326471780|gb|EGD95789.1| hypothetical protein TESG_03255 [Trichophyton tonsurans CBS 112818]
Length = 1212
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 31/254 (12%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
D+ ++ L R + + ++VP++ F RC+ WAK GVYS+ G LGG++ +
Sbjct: 743 DLSLHSLSKLQPYRDQEYVKRMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITM 802
Query: 66 LVARVCQL----YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+++R+ QL + LV+ FF Y + W N +++ G + RR
Sbjct: 803 MLSRLHQLIHERFGRVTVPELVAMFFHHYAHFDWKNNMVVSP------GVHT----RYRR 852
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY-- 179
M I+T P +N + V+ +LR ++ F+ + E + A+WS +
Sbjct: 853 SLREPMVILTAHVPTVNVARAVTAPSLRTIVSAFKRAEELIGE---DGAKWSNILNDISI 909
Query: 180 ---------LFFESYRNYLQVDIV--AANADDLLAWKGWVESRLRQLTLMIERDTYGKLQ 228
F +Y +Y++V++ + + GW+ESR +L + R G +
Sbjct: 910 SQNNQTGAEKFLAAYNSYIKVNVQYWGPSPTQTSSLIGWLESRFFRLLNDLNRQVQG-IH 968
Query: 229 CHPYPHEYVDTSKP 242
+P + P
Sbjct: 969 GRIWPARFTSIDAP 982
>gi|326484937|gb|EGE08947.1| DUF455 domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 1212
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 31/254 (12%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
D+ ++ L R + + ++VP++ F RC+ WAK GVYS+ G LGG++ +
Sbjct: 743 DLSLHSLSKLQPYRDQEYVKRMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITM 802
Query: 66 LVARVCQL----YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+++R+ QL + LV+ FF Y + W N +++ G + RR
Sbjct: 803 MLSRLHQLIHERFGRVTVPELVAMFFHHYAHFDWKNNMVVSP------GVHT----RYRR 852
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY-- 179
M I+T P +N + V+ +LR ++ F+ + E + A+WS +
Sbjct: 853 SLREPMVILTAHVPTVNVARAVTAPSLRTIVSAFKRAEELIGE---DGAKWSNILNDISI 909
Query: 180 ---------LFFESYRNYLQVDIV--AANADDLLAWKGWVESRLRQLTLMIERDTYGKLQ 228
F +Y +Y++V++ + + GW+ESR +L + R G +
Sbjct: 910 SQNNQTGAEKFLAAYNSYIKVNVQYWGPSPTQTSSLIGWLESRFFRLLNDLNRQVQG-IH 968
Query: 229 CHPYPHEYVDTSKP 242
+P + P
Sbjct: 969 GRIWPARFTSIDAP 982
>gi|302882405|ref|XP_003040113.1| hypothetical protein NECHADRAFT_50338 [Nectria haematococca mpVI
77-13-4]
gi|256720980|gb|EEU34400.1| hypothetical protein NECHADRAFT_50338 [Nectria haematococca mpVI
77-13-4]
Length = 1208
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 132/300 (44%), Gaps = 45/300 (15%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
T+ L R + + +P++ + +K WA+ RG+YS GFLGG++ ++L+A +
Sbjct: 746 TLAKLKPVRDLFYLRRSIPDMVQYRMAHLFIKAWAQSRGIYSAKFGFLGGIHISVLLAPL 805
Query: 71 CQLYPNAVPSM----LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH 126
C++ N ++ ++ FF+ Y + W ++ +L R ++T
Sbjct: 806 CKMLANDGATVSTADIIFTFFQHYARFSWKTALVFDPFFHKDL----------RYNRTFR 855
Query: 127 MPIITPAY--PCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF--EP---- 178
P+ + P +N++ N S T+ + +F+ + + + WS L EP
Sbjct: 856 EPLCLLGWHAPALNTAVNASVPTVDAIAAEFERAERL---LSVENFSWSNLLGVEPDSPP 912
Query: 179 --------YLFFESYRNYLQVD--IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQ 228
F ++Y++Y+++D + + + GW+ESR L + ++R +
Sbjct: 913 SSLSGPGATEFLQNYKSYIKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDLDRKV-KNIH 971
Query: 229 CHPYPHEYVDTSKPCA------HCAFFMGLQR---KPGEVVQEGQQFDIRGSVEEFKLSI 279
+P ++D + H + +GL R +P + + Q ++ +++EF+ I
Sbjct: 972 ARIWPARFLDMASSVEGPGTEYHGHYLIGLSRNGEEPNKDDAKATQVALQAALQEFEARI 1031
>gi|429849228|gb|ELA24631.1| duf455 domain-containing protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 1201
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 115/260 (44%), Gaps = 42/260 (16%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
T+ L R I + VP++ F + +K WAK G+Y+ G+LGGV+ ++++ RV
Sbjct: 736 TLLKLKPARDMYYIARSVPDLAQFRVCYQVIKTWAKANGIYAAKFGYLGGVHLSVMLVRV 795
Query: 71 CQLYPNAVPSM----LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH 126
C++ + + ++ +++ FF Y + W N + V+DP +++ + H
Sbjct: 796 CKMLLHGMGTVSTADVIATFFDHYAHFDWKNDI-------------VFDPFFHKQLRYHR 842
Query: 127 MP-----IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW-SALFEPYL 180
P ++ P +N++ S T++++ + + N E A W S L P +
Sbjct: 843 TPREAMCLLGWHSPTLNTALIASVPTVKIISTELRQANAKFTE----GATWQSILSAPGM 898
Query: 181 ------------FFESYRNY--LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGK 226
F S++ + L++ + + GW+ESR L + I R +
Sbjct: 899 IAEKDLSQGAASFLSSFKTFVNLRIHYWGGSLERGSRLVGWLESRCASLLVDINRKV-PE 957
Query: 227 LQCHPYPHEYVDTSKPCAHC 246
L +P +VD + P + C
Sbjct: 958 LAPRIWPARFVDAATPNSQC 977
>gi|336268012|ref|XP_003348771.1| hypothetical protein SMAC_01794 [Sordaria macrospora k-hell]
gi|380094029|emb|CCC08246.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1302
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 19/244 (7%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
T+ L R D + + VP++ F T R ++ WAK RGVY+ G+LGG+ ++++ARV
Sbjct: 826 TLTKLKAARDLDYLRRTVPDLAVFRTAHRAVRSWAKARGVYAQRFGYLGGIQISVMLARV 885
Query: 71 ------CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDPRKN 119
Q LV+ FF Y + W ++ + + E G +
Sbjct: 886 YKALALTQGVTRVGVEELVASFFEEYARFHWGRDMVYDEVCPWFRQKREKGG---EKEVY 942
Query: 120 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYG--NTICEEVELNKAQWSALFE 177
RR M ++ P +N+S S ++R + ++F+ + EEV K
Sbjct: 943 RRTSREAMVVLGWFGPGLNTSGQASVWSVRTLKEEFERARDQLVKEEVRSWKEFLEGSSA 1002
Query: 178 PYLFFESYRNYLQVDIV--AANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHE 235
F Y++Y++VD+ + + GW+ESRL L + + R G + +P
Sbjct: 1003 AEEFLTGYKSYVKVDVQYWGLSPSRGAQFVGWLESRLVMLLVDLHRRAPG-VYVRMWPAR 1061
Query: 236 YVDT 239
+V+
Sbjct: 1062 FVEA 1065
>gi|389628670|ref|XP_003711988.1| hypothetical protein MGG_06121 [Magnaporthe oryzae 70-15]
gi|351644320|gb|EHA52181.1| hypothetical protein MGG_06121 [Magnaporthe oryzae 70-15]
gi|440474755|gb|ELQ43479.1| DUF455 domain-containing protein [Magnaporthe oryzae Y34]
gi|440487378|gb|ELQ67170.1| DUF455 domain-containing protein [Magnaporthe oryzae P131]
Length = 1238
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 106/251 (42%), Gaps = 36/251 (14%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
T+ L R D + + +P++ F R +K WA+ RG+YS G+LGG+ ++L+ARV
Sbjct: 769 TLGKLKALRDLDYLRETIPDLSKFRLAHRAIKTWAQSRGIYSAKFGYLGGIQVSILLARV 828
Query: 71 CQLYPN------AVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
C+L +VP +L S FF Y + W N + +L + R
Sbjct: 829 CKLLARDYGQEVSVPDIL-SSFFSHYASFDWRNKIAFDPFFHKKLNY--------LRSAR 879
Query: 125 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL---- 180
+ I+ P +N++ + +++ + + N + E + W F
Sbjct: 880 EPLAILGFFPPALNTTLAATVPSMKAIARELSQANELLNE---DGMTWDTFFGASSAGGD 936
Query: 181 -----------FFESYRNYLQVDIV--AANADDLLAWKGWVESRLRQLTLMIERDTYGKL 227
F SY++++++++ + + GW+ESR L + + R +L
Sbjct: 937 KTHSLARGAADFLSSYKSFVKIELQYWGISLSKGSQFIGWLESRCPLLLVDMSR-RLPQL 995
Query: 228 QCHPYPHEYVD 238
+P +V+
Sbjct: 996 NFRIWPQRFVE 1006
>gi|225561466|gb|EEH09746.1| DUF455 domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 1256
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 135/319 (42%), Gaps = 55/319 (17%)
Query: 26 KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM--LV 83
+ + N F R +K WAK RG+YS+ G+LGG++ L+++R+ +L P S ++
Sbjct: 800 RTIQNPATFRLLHRIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLMKLLPPNPGSAADIL 859
Query: 84 SRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNV 143
FF Y + W + I + P +N R M I T P +N + +
Sbjct: 860 CTFFNHYGNFNWGKDAVYDPIFHGK-------PPRNYRPPREGMIIFTLHTPIINVARST 912
Query: 144 STSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY-------------LFFESYRNYLQ 190
S ++R ++D+ + + E A W+ L Y F +SY +Y++
Sbjct: 913 SIPSMRKIVDEMKRAENLISE---GNANWAELLGIYPKTGKSALSSSADEFLKSYNSYIK 969
Query: 191 VDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV-----DTS 240
+++ A L+ GWVESR L + R+ + +Q +P + + S
Sbjct: 970 INVQYWSLSLAKGSSLV---GWVESRCLDLLDDLYRE-FPDIQARIWPARFTQNEDHENS 1025
Query: 241 KPCA-----HCAFFMGLQ---------RKPGEVVQEGQQFDIRGSVEEFKLSI--NMYMF 284
P + +GL+ R ++ ++ Q ++ S+++F S+ N F
Sbjct: 1026 TPAQEEHEYQGCYLIGLRKADHATDPTRTFSKLDRKLAQDTLQASMDQFASSVQSNKKYF 1085
Query: 285 WKPGMEICVSHIRRKQIPP 303
+ V+H+++ + P
Sbjct: 1086 NLASAWVDVTHVKQDSLGP 1104
>gi|295664162|ref|XP_002792633.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278747|gb|EEH34313.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1260
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 34/232 (14%)
Query: 26 KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM--LV 83
+ + N F R +K WAK RG+YS+ G+LGG++ L+++R+ +L P S+ ++
Sbjct: 799 RTIQNPAMFRLLHRVIKAWAKSRGIYSSRFGYLGGIHITLMLSRLLKLLPPNTASVADIL 858
Query: 84 SRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNV 143
FF Y + W ++ I F PR NR + M I+T YP MN +
Sbjct: 859 RTFFNHYADFYWMEGMVYDMI------FHRKQPRYNRSPR-EGMVILTLHYPIMNVARTA 911
Query: 144 STSTLRVMMDQFQYGNTICEEVELNKAQWSALF-------EPYL------FFESYRNYLQ 190
S S++R ++D+ +T+ E L +W++L +P L F +SY +Y++
Sbjct: 912 SISSMRTIVDEMDRADTLISEGRL---RWTSLVGITPQAGQPTLSNSADEFLKSYNSYIK 968
Query: 191 VDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 237
+++ A L+ GW+ESR L I R LQ +P +
Sbjct: 969 INVQYWGLSLAKGSSLI---GWLESRCLFLLADIHR-KLPDLQTRIWPARFT 1016
>gi|310792019|gb|EFQ27546.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola M1.001]
Length = 1198
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 138/314 (43%), Gaps = 54/314 (17%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
T+ L R + + +P++ F + + +K WAK RG+Y+ G+LGG++ ++++ +V
Sbjct: 738 TLLKLKPARDLFYLQRSIPDLAQFRVSFQAIKTWAKSRGIYAAKFGYLGGIHLSVMLVKV 797
Query: 71 CQ--LYPNAVPSM--LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH 126
C+ L V S +++ FF Y+ + W N V V+DP ++ + H
Sbjct: 798 CKMLLRVGGVVSAVDIITTFFDHYSRFDWQNDV-------------VFDPFFHKNLRYHR 844
Query: 127 MP-----IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF----- 176
P ++ P +N++ S T++++ + + T ++ + A W +L
Sbjct: 845 TPREAMCLLGWHSPTLNTALIASVPTVKIISAELCHAAT---QLSGDGASWQSLLSIPDS 901
Query: 177 --------EPYLFFESYRNY--LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGK 226
F SYR++ L++ A+ + GW+ESR L + I R +
Sbjct: 902 SQDRNMTPSASKFLGSYRSFVNLRIHYWGASLERGSRLVGWLESRCASLLVDINRRV-PE 960
Query: 227 LQCHPYPHEYVDTSKPCA-------HCAFFMGL-----QRKPGEVVQEGQQFDIRGSVEE 274
L +P +VD+ P A ++ +GL KP E Q ++ +++
Sbjct: 961 LSARIWPARFVDSLTPEADETRGDYQGSYLIGLDWMNSDEKPSRDDLETAQSNLWAVLQQ 1020
Query: 275 F-KLSINMYMFWKP 287
F KL ++ ++ P
Sbjct: 1021 FEKLIVSDEKYFDP 1034
>gi|169617838|ref|XP_001802333.1| hypothetical protein SNOG_12099 [Phaeosphaeria nodorum SN15]
gi|160703499|gb|EAT80511.2| hypothetical protein SNOG_12099 [Phaeosphaeria nodorum SN15]
Length = 1179
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 115/279 (41%), Gaps = 35/279 (12%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
++R L R I + +P++ F RC+K WA RRG+YS G+LGGV+ L+++
Sbjct: 741 SLRKLKPYRDLLYIQRTLPSLSAFRLAYRCIKLWAVRRGIYSAKFGYLGGVHITLMLSWA 800
Query: 71 CQLYPNAVPSM----LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH 126
+ + S+ LVS FF + + W N +M A F PR +R +
Sbjct: 801 AKCLAHDSGSITAPDLVSSFFHHFAHFNWTNDMMYDAF------FHKQKPRYHRSAR-EP 853
Query: 127 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELN------------KAQWSA 174
M ++ P N ++ + L ++ + + + + + +A S
Sbjct: 854 MVVLGFHAPNSNIAHTSTLPGLHTLVSEMKAADEALSDPSMTWKKFFGSTDNSPQAALSP 913
Query: 175 LFEPYLFFESYRNYLQVDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQC 229
+ F ++ +Y+++DI A L+ GWVESR L + I + L
Sbjct: 914 ISGASDFLSAHSSYVKIDIQFWGRTLAKGKSLV---GWVESRCLSLVVDIYK-MLPDLAV 969
Query: 230 HPYPHEYVDTSKPCA---HCAFFMGLQRKPGEVVQEGQQ 265
+P + D+ H + +GL R E Q+
Sbjct: 970 RIWPARFTDSDTIEGGDYHGCYLIGLSRPSNEHALNTQE 1008
>gi|296820870|ref|XP_002850004.1| DUF455 domain-containing protein [Arthroderma otae CBS 113480]
gi|238837558|gb|EEQ27220.1| DUF455 domain-containing protein [Arthroderma otae CBS 113480]
Length = 1204
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 125/292 (42%), Gaps = 31/292 (10%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
D+ ++ L R + I ++VP++ F RC+ WAK GVYS+ G LGG++ +
Sbjct: 746 DLSIYSLSKLQPFRDQEYIKRMVPDMYVFQLAHRCITLWAKTSGVYSSKFGLLGGIHITM 805
Query: 66 LVARVCQLYPN-----AVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNR 120
+++R+ QL VP +L + FF Y + W N V+ + K R
Sbjct: 806 MLSRLHQLLHEDIGRVTVPELL-TMFFHHYANFDWKNKVVDSPGTRS----------KYR 854
Query: 121 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 180
R M I+T P +N + V+ S+LR ++ F+ + E + A+WS +
Sbjct: 855 RLLREPMVILTVHIPTINVARAVTASSLRTIISAFKRVEELLAE---DGARWSNVLSDTS 911
Query: 181 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 240
+ + + +VA N+ + + W S + +L+ + +P +
Sbjct: 912 ISHNNQTGAEKFLVAYNSYIKVNVQYWGASSTQASSLLDLGKQVPSVHGRIWPARFTSID 971
Query: 241 KPC-AHCA-------FFMGLQRKPGEVVQEGQQFD----IRGSVEEFKLSIN 280
P H A + +GL+R G + + D ++ ++ +F S++
Sbjct: 972 APNDGHTAETEYVGCYLIGLERLQGSLSSTASKEDGKRALQATLSQFTASLH 1023
>gi|154282695|ref|XP_001542143.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410323|gb|EDN05711.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1178
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 34/232 (14%)
Query: 26 KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM--LV 83
+ + N F R +K WAK RG+YS+ G+LGG++ L+++R+ +L P S ++
Sbjct: 759 RTIRNPATFRLLHRIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLMKLLPPNPGSAADIL 818
Query: 84 SRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNV 143
FF Y + W + I + P +N R M I T P +N + +
Sbjct: 819 CTFFNHYGNFNWEKDAVYDPIFHEK-------PPRNYRPPREGMIIFTLHTPIINVARST 871
Query: 144 STSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY-------------LFFESYRNYLQ 190
S ++R ++D+ + + E A W+ L Y F +SY +Y++
Sbjct: 872 SIPSMRKIVDEMKRAENLISE---GNANWAELLGVYPKPGKSALSSSADEFLKSYNSYIK 928
Query: 191 VDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 237
+++ A L+ GWVESR L + R+ + +Q +P +
Sbjct: 929 INVQYWSLSLAKGSSLV---GWVESRCLDLLNDLYRE-FPDIQARIWPARFT 976
>gi|239612757|gb|EEQ89744.1| DUF455 domain-containing protein [Ajellomyces dermatitidis ER-3]
Length = 1266
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 137/324 (42%), Gaps = 63/324 (19%)
Query: 26 KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM---- 81
+ VPN F R +K WAK RG+YS+ G+LGG++ +++++V +L P+ P+
Sbjct: 798 RTVPNPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPAPSAAD 857
Query: 82 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH------MPIITPAYP 135
++ FF Y + W VM +DP +++ +H M I+T P
Sbjct: 858 ILCTFFNYYGNFNWKEGVM-------------YDPSFHKKPPLYHRTPQEGMVILTLHAP 904
Query: 136 CMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY----------LFFESY 185
MN + + S + R ++D+ + + + E N A+ + F SY
Sbjct: 905 VMNVARSASIPSTRTIVDEMKRADNLISEGNTNWAELVGIVANTGKSSLSVSGDEFLRSY 964
Query: 186 RNYLQVDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV--- 237
+Y+++++ A L+ GW+ESR L + R + +Q +P +
Sbjct: 965 NSYIKINVQYWGLSLAKGSSLV---GWLESRCLVLLADLHR-KFPDIQTRIWPARFTQIE 1020
Query: 238 --DTSKPCA-----HCAFFMGLQRK-----PGEVVQEGQQF----DIRGSVEEFKLSINM 281
D S P + + L + P + + + ++ S+++F +I+
Sbjct: 1021 DHDDSTPAQEEREYQGCYLISLTKAEHATDPTRTLSKSDRKLAHDTLQASIDQFASNIHN 1080
Query: 282 Y--MFWKPGMEICVSHIRRKQIPP 303
Y F + VSH+++ + P
Sbjct: 1081 YKKYFDSASAWVDVSHVKQGNLGP 1104
>gi|302499068|ref|XP_003011530.1| hypothetical protein ARB_02083 [Arthroderma benhamiae CBS 112371]
gi|291175082|gb|EFE30890.1| hypothetical protein ARB_02083 [Arthroderma benhamiae CBS 112371]
Length = 1209
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 36/240 (15%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
D+ ++ L R + I ++VP++ F RC+ AK GVYS+ G LGG++ +
Sbjct: 746 DLSLHSLSKLQPYRDQEYIKRMVPDMYVFRLAYRCIVQRAKSSGVYSSKFGLLGGIHITM 805
Query: 66 LVARVCQL----YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
+++++ QL + LVS FF Y + W N +++ + + RR
Sbjct: 806 MLSQLHQLVHEKFGRVTVPELVSMFFHYYAHFDWKNNMVVSPGVQT----------RYRR 855
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY-- 179
M I+T P +N + V+ +LR ++ F + E + A+WS +
Sbjct: 856 SLREPMVILTVHVPTINVARAVTAPSLRTIVSAFNRAEELMGE---DGARWSNILNDISI 912
Query: 180 ---------LFFESYRNYLQVDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYG 225
F +Y +Y++V++ A L+ GW+ESR +L ++R G
Sbjct: 913 SHNNQTGAEKFLTAYNSYIKVNVQYWGPSPTQASSLI---GWLESRFFRLLNDLDRQALG 969
>gi|392870452|gb|EAS32255.2| hypothetical protein CIMG_03182 [Coccidioides immitis RS]
Length = 1241
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 30/232 (12%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
D+ + L R D I + +P++ F T R + WAK RGVY + G+LGG++ +
Sbjct: 775 DLSYQALTKLQAFRDLDYIRRSIPDLAAFRTAHRFITAWAKHRGVYLSRFGYLGGIHITM 834
Query: 66 LVARVCQLYPNAV---PSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
+++RV +L+ V + ++ RFF+ Y + W + + F PR RR
Sbjct: 835 MLSRVFKLFCGEVRVTSTDMIYRFFQYYADFDWEHKTVFDPF------FFESTPRY-RRY 887
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL-- 180
M I+T P +N + + + R ++++ + + + ++ WS L +
Sbjct: 888 ANEPMVILTINVPLINVA-RATAGSARTIVEELRRMAQLMSDPDMT---WSKLLNSTVST 943
Query: 181 ------FFESYRNYLQVD-----IVAANADDLLAWKGWVESRLRQLTLMIER 221
F +Y +Y+++ I A LL GW+ESR +L I+R
Sbjct: 944 LEPSEEFLTAYSSYIKIHVQYWGISLAKGKTLL---GWLESRCVRLLNDIDR 992
>gi|124003256|ref|ZP_01688106.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
ATCC 23134]
gi|123991354|gb|EAY30785.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
ATCC 23134]
Length = 982
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 16/191 (8%)
Query: 34 FCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA---RVCQLYPNAVPSMLVSRFFRVY 90
F +R ++ WA R+ + NV GF G ++WA+L A CQ L+ FF +
Sbjct: 746 FRDLVRTIRLWAARKQLTGNVFGFFGNISWAILAAWSCAHCQTKHTPTLEHLLQNFFDLL 805
Query: 91 TMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRV 150
W P+ L + G S + RK+R MP+++ YP N++ N++ ST +V
Sbjct: 806 AQHSWVIPIGL------QEGTSSYIVRKHR----DWMPVVSAFYPYKNTTRNLTQSTAKV 855
Query: 151 MMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVES 210
+ + Q + + +N W F + Y L +++ A+N +L +G +
Sbjct: 856 IQGEIQKARLLLQNTSIN---WLTFFAATDVQKEYTQLLILELSASNEQNLELAQGKLLG 912
Query: 211 RLRQLTLMIER 221
L + L +E+
Sbjct: 913 SLLGVILALEQ 923
>gi|396483666|ref|XP_003841760.1| similar to DUF455 domain-containing protein [Leptosphaeria maculans
JN3]
gi|312218335|emb|CBX98281.1| similar to DUF455 domain-containing protein [Leptosphaeria maculans
JN3]
Length = 1224
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 123/279 (44%), Gaps = 54/279 (19%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
++R L R I + +P++ F T RC+K WA +RG+YS+ G+L G + L++ +
Sbjct: 757 SLRKLKSYRDFLYIQRTLPSLSAFRTAFRCIKLWAVQRGIYSSKFGYLSGTHITLMLTWI 816
Query: 71 C-----QLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
C Q P M+VS FF Y + W N ++ A F PR +R +
Sbjct: 817 CKKLRYQSGSVGPPDMVVS-FFSYYANFDWTNELLFDAF------FHESRPRYHRSARE- 868
Query: 126 HMPIITPAY--PCMNSSYNVSTSTLRVMMDQFQ----------------YGN--TICEEV 165
P++ Y P N ++ +T L+++M++F+ +G+ ++ + V
Sbjct: 869 --PMVILGYHAPHSNIAHTSTTPGLQILMNEFRAAADVLSSPGITWAKFFGDPSSLKDSV 926
Query: 166 ELNKAQWSALFEPYLFFESYRNYLQVDI-----VAANADDLLAWKGWVESRLRQLTLMIE 220
+L+ +Q + F + +++ V++ A L+ GW+ESR L + I
Sbjct: 927 QLHLSQMTE-----HFLATQHSFVTVEMQYWGRTLAKGKGLV---GWIESRCLSLVVDIH 978
Query: 221 RDTYGKLQCHPYPHEYVDTSKPCA-----HCAFFMGLQR 254
+ +L+ +P + + H + +GL R
Sbjct: 979 K-MLPELEVRIWPTRFTNDKADLKELKEYHGCYLIGLTR 1016
>gi|7108953|gb|AAF36552.1|AF201910_1 polyA polymerase [Trypanosoma cruzi]
Length = 304
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILKLVP-NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
S L V T S+NG R ++ + +P + F T L+ +K WA RR VY N+ + G
Sbjct: 156 SFLLQVARDTRHSVNGLRTVLEVKRRLPVAYDVFTTVLKSVKLWAMRRKVYGNLYCYPSG 215
Query: 61 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMW 93
V A++VAR+CQ+ P + P++L+ FF YT W
Sbjct: 216 VVLAIMVARICQVMPASHPNVLLRFFFLFYTQW 248
>gi|164429482|ref|XP_001728545.1| hypothetical protein NCU11050 [Neurospora crassa OR74A]
gi|157073494|gb|EDO65454.1| predicted protein [Neurospora crassa OR74A]
Length = 1368
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 107/246 (43%), Gaps = 23/246 (9%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
T+ L R D + + VP++ F R ++ WAK RGVY+ G+LGG+ ++++ARV
Sbjct: 893 TLTKLKAARDLDYLRRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGYLGGIQISVMLARV 952
Query: 71 CQLYP-------NAVPSMLVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDPRK 118
+ LV+ FF Y + W ++ + + E G +
Sbjct: 953 YKALALGAGGVSGVGVEELVASFFEEYAQFDWEKDMVYDEVCPWLRLKREKGG---EKEV 1009
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE- 177
RR M ++ P +N+S S ++R + D+F+ + + E+ W +
Sbjct: 1010 YRRTGREAMVVLGWFGPGLNTSGQASVWSVRTLKDEFKRARDLLVKGEVK--SWKEFLKG 1067
Query: 178 --PYLFFESYRNYLQVDIV--AANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP 233
F Y++Y++VD+ ++ + GW+ESR L + + R G + +P
Sbjct: 1068 SGAEEFLTGYKSYVKVDVQYWGLSSSKGAQFVGWLESRCVMLLVDLHRRAPG-VYVRMWP 1126
Query: 234 HEYVDT 239
+V+
Sbjct: 1127 GRFVEA 1132
>gi|218200294|gb|EEC82721.1| hypothetical protein OsI_27409 [Oryza sativa Indica Group]
Length = 293
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 12/192 (6%)
Query: 118 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 177
K RR MPI+ P P + N++ T + + ++ G + +E + +W LF
Sbjct: 84 KARRPDGSFMPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFA 143
Query: 178 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 237
P+ + Y +L++ + A +++L W GWV+SR R L L +E + G ++C P
Sbjct: 144 PFPYATKYEEFLRIALCAPTSEELRDWAGWVKSRFRNLILKLE--SIG-VECDP------ 194
Query: 238 DTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWK---PGMEICVS 294
D+++ H F + G + + DI E+F + ++ K ++ +S
Sbjct: 195 DSTEEVDHTVFEPSIVCHWGLIYKTSTHIDISSLGEDFMKDVINDVYGKVKGTHSKLTMS 254
Query: 295 HIRRKQIPPYVF 306
+R Q+P ++
Sbjct: 255 IVRSSQLPKSLY 266
>gi|296421816|ref|XP_002840460.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636676|emb|CAZ84651.1| unnamed protein product [Tuber melanosporum]
Length = 1241
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 19/188 (10%)
Query: 12 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 71
++SLN R + +L+ +PN+ F R +K WA GV+S+ G+LGG + LL+AR+C
Sbjct: 787 LKSLNSYRDTEFLLRTIPNINVFRLAHRFIKIWALASGVFSSRFGYLGGFHITLLLARIC 846
Query: 72 QLY----PNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 127
+L + + +V FF Y+ W + +C E G S +R M
Sbjct: 847 KLADGDPKDVTAAKIVRLFFAYYSKTEWLTEI-ICD-PEFSAGASY------QRFSREPM 898
Query: 128 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWS--ALFEPYLFFESY 185
+ + P +N + N + ++ + +F+ E L+ +W ++ F Y
Sbjct: 899 AVTSIYAPVVNVARNATRHSVSALTREFELA-----EKALDSGRWDLRSMGRENEFLAEY 953
Query: 186 RNYLQVDI 193
+Y+++D+
Sbjct: 954 ESYVKIDV 961
>gi|402083981|gb|EJT78999.1| hypothetical protein GGTG_04090 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1263
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 111/259 (42%), Gaps = 48/259 (18%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
T+ L R D + + +P++ F R ++ WA+ RG+YS G+LGG+ ++L+ARV
Sbjct: 777 TLGKLKAARDLDYLRRSLPDLAKFRLAHRAVRTWARTRGIYSVRFGYLGGIQISVLLARV 836
Query: 71 CQ-LYPNAVPSMLVS----RFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 125
C+ L +A P + V+ FF Y + W + L F DP + + ++
Sbjct: 837 CKSLARDAGPGLSVADILVTFFHHYAAFDW----------QQNLAF---DPFFHNKKLSY 883
Query: 126 H------MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE-- 177
H + I+ P +N+S+ + ++R M +F+ + ++ W A F
Sbjct: 884 HRTFREPLAILGFFPPMLNTSHAATIPSVRAMAGEFRRAAALLASEDVT---WDAFFRGG 940
Query: 178 ----------------PYLFFESYRNYLQVDIV--AANADDLLAWKGWVESRLRQLTLMI 219
F SY++++++++ + + GW ESR + + +
Sbjct: 941 GPTTVPGPLSATLPSGAADFLASYKSFVKLELSYWGISLPRGAQFVGWFESRCPLILVDV 1000
Query: 220 ERDTYGKLQCHPYPHEYVD 238
R L +P +VD
Sbjct: 1001 SRRLPNVL-ARMWPERFVD 1018
>gi|353236816|emb|CCA68803.1| related to poly(A) polymerase [Piriformospora indica DSM 11827]
Length = 1198
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 133/323 (41%), Gaps = 38/323 (11%)
Query: 14 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 73
+L+ R + +++P++ F R LK + RRG+ G+LGG + LL+ RV
Sbjct: 724 TLSAYRDVLILRRVIPSLSAFVKAHRALKLFLSRRGLVGARFGYLGGFHLTLLLTRVAIT 783
Query: 74 YPNAV---PSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 130
P++ LV F R Y +W W + A +G + R + M ++
Sbjct: 784 LPHSAGRSAPHLVEAFLREYAVWDWTQDTVHPIPAAAAVGTGAY----KRVVQREPMAVL 839
Query: 131 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE--VELNKAQWSALFEPYLFFESYRNY 188
+ + P N + N S +++ + Q N + L+ + L F + YR++
Sbjct: 840 SISKPQKNIASNASWNSVASLSHGLQTANATLQSGGTWLDVCGTNPLKS---FIDEYRSF 896
Query: 189 LQVDIVAANADDL--LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS--KPCA 244
+++++ D + A GW+ES++ L + + T ++ +P VD S P
Sbjct: 897 VKIEVHYWGGDCMQGRALMGWLESKIVSLLVQLHM-TVPEVTARLWPQRLVDESVVDPNT 955
Query: 245 ---HCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI-------------NMYMFWKPG 288
+ + +GL + +G + R S E + ++ N +
Sbjct: 956 RDPNSFYLLGLS-----LFSQGDEQTARRSSGELEAALLNALRTFEQNVRSNEKYYNAAS 1010
Query: 289 MEICVSHIRRKQIPPYVFPEGYK 311
I VSH +R Q+P V + +K
Sbjct: 1011 TFISVSHAKRTQLPSSVLVDPFK 1033
>gi|340521883|gb|EGR52117.1| predicted protein [Trichoderma reesei QM6a]
Length = 1224
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 128/305 (41%), Gaps = 47/305 (15%)
Query: 12 VRSLNGCRVADQILKL---VPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 68
++SL + A + L +P++ + +K WAK RG+Y+ G LGG++ ++
Sbjct: 760 LQSLAKLKPARDLFYLRRSIPDMTKYRVAHLVIKAWAKSRGLYAAKFGLLGGIHITSMLV 819
Query: 69 RVCQLYPN----AVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
VC+ N A + +++ FF Y+ + W V+ EL R +T
Sbjct: 820 PVCKALANEPEAASTADVLTSFFHHYSTFDWATGVVYDPFYHTEL----------RYHRT 869
Query: 125 HHMPIITPAY--PCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW---------S 173
P+ + P +N++ + S ST+ + +F T+ + + +++ S
Sbjct: 870 FREPLCLLGWHGPSLNTASSASISTVNALASEFTRAATLLSQEGMTWSKFLGVEQSESPS 929
Query: 174 ALFEPYL--FFESYRNYLQVDIV--AANADDLLAWKGWVESRLRQLTLMIERDTYGKLQC 229
+L E F +SYR Y+++ ++ + GW+ESRL + + I R + G +
Sbjct: 930 SLLEKGAADFLDSYRTYIKISARYWGSSQQKGRKYLGWLESRLISILVDISRKSPG-IVP 988
Query: 230 HPYPHEYVDTSK---------PCAHCAFFMGLQRKPGEVVQEGQQFD-----IRGSVEEF 275
+P + D + P + +GL++ + I+G ++EF
Sbjct: 989 RIWPARFTDEEQSSSNTDAENPELTACYLIGLKKDDAAANKSATSLTTAEGAIQGILQEF 1048
Query: 276 KLSIN 280
+ I
Sbjct: 1049 ESRIQ 1053
>gi|452004284|gb|EMD96740.1| hypothetical protein COCHEDRAFT_1220308 [Cochliobolus heterostrophus
C5]
Length = 1226
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 110/251 (43%), Gaps = 37/251 (14%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
++R L R + + +P+ F R +K WA +RG+Y+ G+LGG++ L+++ V
Sbjct: 765 SLRKLKPYRDLLYLQRTIPSRSIFRQAYRLIKLWAVQRGLYAAKFGYLGGMHITLMLSWV 824
Query: 71 CQLYPNAVPSM----LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH 126
C+ + V S+ +V FF+ Y + W N ++ A F PR NR +
Sbjct: 825 CKSLAHNVGSVSIADIVVSFFQHYANFDWSNDMVYDAF------FHKKKPRYNRSAR-EP 877
Query: 127 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF--------EP 178
M I++ P N + + L+ ++ + + + E + W F EP
Sbjct: 878 MVILSFHAPNSNFAQKSTVPGLQTLIKELKAADMKLSEPGMT---WQKFFSTSSDLASEP 934
Query: 179 YL------FFESYRNYLQVDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKL 227
L F +Y +++++DI + A L+ GWVESR + + I + G
Sbjct: 935 RLPYGAVEFLNTYNDFVKIDIQFWGRMLAKGKSLV---GWVESRCISIVVDIHKALPGS- 990
Query: 228 QCHPYPHEYVD 238
+ +P + D
Sbjct: 991 EVRVWPALFTD 1001
>gi|320039014|gb|EFW20949.1| hypothetical protein CPSG_02791 [Coccidioides posadasii str.
Silveira]
Length = 1241
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 139/324 (42%), Gaps = 42/324 (12%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
D+ + L R D I + +P++ F R + WAK RGVY + G+LGG++ +
Sbjct: 775 DLSYQALTKLQAFRDLDYIRRSIPDLAAFRKAHRFITAWAKHRGVYLSRFGYLGGIHITM 834
Query: 66 LVARVCQLYPNAV---PSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
+++RV +L+ V + ++ RFF+ Y + W + + F PR RR
Sbjct: 835 MLSRVFKLFCGEVRVTSTDMIYRFFQYYADFDWEHETVFDPF------FFESTPRY-RRY 887
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL-- 180
M I+T P +N + + + R ++++ + + + ++ WS L +
Sbjct: 888 ANEPMVILTINVPLINVA-RATAGSARTIVEELRRMAQLMSDPDMT---WSKLLNSTVST 943
Query: 181 ------FFESYRNYLQVD-----IVAANADDLLAWKGWVESRLRQLTLMIER---DTYGK 226
F +Y +Y+++ I A LL GW+ESR +L I+R Y +
Sbjct: 944 LEPSEEFLTAYSSYIKIHVQYWGISLAKGKMLL---GWLESRCVRLLNDIDRKLPSIYAR 1000
Query: 227 LQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV------QEGQQFDIRGSV-EEFKLSI 279
+ + + + + +GL ++ E + Q D+ V E+FK I
Sbjct: 1001 IWPARFSSKDAMSDDSEYQGCYLIGLTKRETERTEAMTKEERKQSLDLMTRVLEKFKTQI 1060
Query: 280 NMYM-FWKPGME-ICVSHIRRKQI 301
++ P + V+H+++ ++
Sbjct: 1061 QEETKYFDPTTAWLDVTHVKQSEL 1084
>gi|303317898|ref|XP_003068951.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240108632|gb|EER26806.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1241
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 139/324 (42%), Gaps = 42/324 (12%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
D+ + L R D I + +P++ F R + WAK RGVY + G+LGG++ +
Sbjct: 775 DLSYQALTKLQAFRDLDYIRRSIPDLAAFRKAHRFITAWAKHRGVYLSRFGYLGGIHITM 834
Query: 66 LVARVCQLYPNAV---PSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 122
+++RV +L+ V + ++ RFF+ Y + W + + F PR RR
Sbjct: 835 MLSRVFKLFCGEVRVTSTDMIYRFFQYYADFDWEHETVFDPF------FFESTPRY-RRY 887
Query: 123 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL-- 180
M I+T P +N + + + R ++++ + + + ++ WS L +
Sbjct: 888 ANEPMVILTINVPLINVA-RATAGSARTIVEELRRMAQLMSDPDMT---WSKLLNSTVST 943
Query: 181 ------FFESYRNYLQVD-----IVAANADDLLAWKGWVESRLRQLTLMIER---DTYGK 226
F +Y +Y+++ I A LL GW+ESR +L I+R Y +
Sbjct: 944 LEPSEEFLTAYSSYIKIHVQYWGISLAKGKMLL---GWLESRCVRLLNDIDRKLPSIYAR 1000
Query: 227 LQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV------QEGQQFDIRGSV-EEFKLSI 279
+ + + + + +GL ++ E + Q D+ V E+FK I
Sbjct: 1001 IWPARFSSKDAMSDDSEYQGCYLIGLTKRETERTEAMTKEERKQSLDLMTRVLEKFKTQI 1060
Query: 280 NMYM-FWKPGME-ICVSHIRRKQI 301
++ P + V+H+++ ++
Sbjct: 1061 QEETKYFDPTTAWLDVTHVKQSEL 1084
>gi|162448422|ref|YP_001610789.1| polynucleotide adenyltransferase [Sorangium cellulosum So ce56]
gi|161159004|emb|CAN90309.1| Polynucleotide adenyltransferase [Sorangium cellulosum So ce56]
Length = 961
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 20/227 (8%)
Query: 32 EHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYT 91
E F R +K WA+ +G+ + G L G+ W +L ARV P+ P L+SRFF +
Sbjct: 714 EAFLALGRAVKAWARAKGIDAAPFGGLPGIAWLVLAARVVCDAPDLEPGPLLSRFFGAWA 773
Query: 92 MWRWPNPVMLCAIDEAELGFSV-WDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRV 150
W + P+ A+D + DP + I TP P + S V + L
Sbjct: 774 AWDFRRPI---ALDPSAPAVGTPGDPVR----------IATPTAPVRSCSDTVGAAALAT 820
Query: 151 MMDQ-FQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVE 209
+ D+ + + + + L P + + + + A + + + GWV
Sbjct: 821 LSDELYSAWEAVESALAAGRDPLPDLLAPPPLHRRHAAWAVITVEAPEPEGVASGLGWVR 880
Query: 210 SRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP 256
R+R L ER G L+ +PH + + H +GL + P
Sbjct: 881 GRIRALLSSFERAGVGDLRA--WPHAFDRGPRLARHA---IGLGKSP 922
>gi|242051340|ref|XP_002463414.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
gi|241926791|gb|EER99935.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
Length = 460
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 46/74 (62%)
Query: 25 LKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVS 84
L ++ ++ F LRC+K WA++RG++ + GF G++ A+L A VC+ +P+A + L +
Sbjct: 220 LPVIDALKKFQALLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPDASVNGLFA 279
Query: 85 RFFRVYTMWRWPNP 98
FF+ + W W P
Sbjct: 280 VFFQTFAHWPWQVP 293
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 126 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 185
H+ I+ AY C V F + + + QW+ LFEP+ + + Y
Sbjct: 257 HLAILA-AYVCRKFPDASVNGLFAVFFQTFAHWPWQVPDSLRHDFQWTWLFEPFPYDKKY 315
Query: 186 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH 245
+ +L++ + A +L W GWV+SR R L L +ER ++C P P E VD + +
Sbjct: 316 QQFLRIALCAPTFAELRDWAGWVKSRFRLLILKLER---AGIECDPCPSEEVDHTDNDPN 372
Query: 246 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 280
F+ GL P ++ Q D E+F SI
Sbjct: 373 VVFYWGL--IPERII----QVDTSSLKEDFMESIT 401
>gi|336471290|gb|EGO59451.1| hypothetical protein NEUTE1DRAFT_79561 [Neurospora tetrasperma FGSC
2508]
Length = 1329
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 107/246 (43%), Gaps = 23/246 (9%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
T+ L R D + + VP++ F R ++ WAK RGVY+ G+LGG+ ++++ARV
Sbjct: 854 TLTKLKAARDLDYLRRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGYLGGIQISVMLARV 913
Query: 71 CQLYP-------NAVPSMLVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDPRK 118
+ LV+ FF Y + W ++ + + E G +
Sbjct: 914 YKALALGAGGVSGVGVEELVASFFEEYAQFDWEKDMVYDEVCPWFRQKREKGG---EKEV 970
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE- 177
+R M ++ P +N+S S ++R + ++F+ + + E+ W +
Sbjct: 971 YKRTGREAMVVLGWFGPGLNTSGQASVWSVRTLKEEFKRARDLLVKGEVK--SWKEFLKG 1028
Query: 178 --PYLFFESYRNYLQVDI--VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP 233
F Y++Y++VD+ ++ + GW+ESR L + + R G + +P
Sbjct: 1029 SGAEEFLTGYKSYVKVDVQYWGLSSSKGAQFVGWLESRCVMLLVDLHRRAPG-VYVRMWP 1087
Query: 234 HEYVDT 239
+V+
Sbjct: 1088 GRFVEA 1093
>gi|350292383|gb|EGZ73578.1| hypothetical protein NEUTE2DRAFT_108297 [Neurospora tetrasperma FGSC
2509]
Length = 1330
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 107/246 (43%), Gaps = 23/246 (9%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
T+ L R D + + VP++ F R ++ WAK RGVY+ G+LGG+ ++++ARV
Sbjct: 855 TLTKLKAARDLDYLRRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGYLGGIQISVMLARV 914
Query: 71 CQLYP-------NAVPSMLVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDPRK 118
+ LV+ FF Y + W ++ + + E G +
Sbjct: 915 YKALALGAGGVSGVGVEELVASFFEEYAQFDWEKDMVYDEVCPWFRQKREKGG---EKEV 971
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE- 177
+R M ++ P +N+S S ++R + ++F+ + + E+ W +
Sbjct: 972 YKRTGREAMVVLGWFGPGLNTSGQASVWSVRTLKEEFKRARDLLVKGEVK--SWKEFLKG 1029
Query: 178 --PYLFFESYRNYLQVDI--VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP 233
F Y++Y++VD+ ++ + GW+ESR L + + R G + +P
Sbjct: 1030 SGAEEFLTGYKSYVKVDVQYWGLSSSKGAQFVGWLESRCVMLLVDLHRRAPG-VYVRMWP 1088
Query: 234 HEYVDT 239
+V+
Sbjct: 1089 GRFVEA 1094
>gi|407922599|gb|EKG15696.1| Endonuclease/exonuclease/phosphatase [Macrophomina phaseolina MS6]
Length = 1142
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 128/316 (40%), Gaps = 30/316 (9%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
T+ L R + P++ F R L WA+ RG+Y+ G+L G + +L++ R+
Sbjct: 688 TLSKLKAIRDLAHLQNTTPDLPAFQMAYRLLVVWARSRGIYAARFGYLSGTHISLMLDRI 747
Query: 71 CQLY----PNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH 126
+L + + LV FFR Y + W + + A G R +R +
Sbjct: 748 AKLLYHSNRDVTAADLVCAFFRYYAEFDWSKNTVEDPLARAIPGMG----RPYQRHASEP 803
Query: 127 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTIC--EEVELNKAQWSALF-----EPY 179
M ++ P +N + + + V+ ++ Q + + + + + W+ +
Sbjct: 804 MVVLGYHIPRVNIARAATVPAVGVLTEELQRAHALVTKQPEQGSTPTWAEIIGEERNSAA 863
Query: 180 LFFESYRNYLQVDIVAANADDLLAWK--GWVESRLRQLTLMIERDTYGKLQCHPYPHEY- 236
F +YR+Y++VD+ + + GWVESR L + + R ++ +P +
Sbjct: 864 EFLSAYRSYIRVDVQYWGTSSVKGRQLIGWVESRCPTLLIDLNRKI-PEIHARMWPLRFA 922
Query: 237 --VDTSKPCAHCAFFMGLQRK-------PGEVVQEGQQFDIRGSVEEFKLSI--NMYMFW 285
K H + +GL ++ E ++ Q + G +E F I N F
Sbjct: 923 RGASNEKGDQHGCYLVGLAKRQDSDSDSKTEADRKLAQSKLDGVLERFSDQIRGNEKFFD 982
Query: 286 KPGMEICVSHIRRKQI 301
+ VSH+ R ++
Sbjct: 983 PTSGWVEVSHVSRAKL 998
>gi|384498736|gb|EIE89227.1| hypothetical protein RO3G_13938 [Rhizopus delemar RA 99-880]
Length = 281
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 88/171 (51%), Gaps = 22/171 (12%)
Query: 2 SVLNDVDEPTVRSLNGCRVADQILK--LVP-NVEHFCTTLRCLKFWAKRRGVYSNVTGFL 58
S+L D+D+ ++ +++G R+ +Q K + P NV F +L+C+K+WA +RG+Y+ G+L
Sbjct: 113 SLLQDMDDASLATMDGPRL-NQFNKSQIKPSNVRLFQVSLQCIKYWAIQRGLYNAEIGYL 171
Query: 59 GGVNWALLVARV---CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWD 115
LL+ + Q ++++ FF++++ W W PV+L + D
Sbjct: 172 NETACTLLLIKTFMFIQSKEKLSITIILQNFFQMWSKWPWKTPVILTN--------HIPD 223
Query: 116 PRKNRRD-------KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGN 159
N+ + + MPII+P YP + + V+ T + + +F+ GN
Sbjct: 224 KNGNKLEYSSITGSQKAMMPIISPCYPVYSVTPYVTKLTQKTIQLEFERGN 274
>gi|380475493|emb|CCF45225.1| endonuclease/Exonuclease/phosphatase [Colletotrichum higginsianum]
Length = 1195
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 130/302 (43%), Gaps = 53/302 (17%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
T+ L R + + VP++ F + + +K WAK RG+Y+ G+LGG++ ++++ +V
Sbjct: 735 TLLKLKPARDLFYLQRSVPDLAQFRMSFQAIKTWAKARGIYAAKFGYLGGIHLSVMLVKV 794
Query: 71 CQ--LYPNAVPSM--LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH 126
C+ L+ V S +++ FF Y+ W + V+DP ++ K H
Sbjct: 795 CKMLLHDGGVVSTADIITTFFDHYSQLDWQRDM-------------VFDPFFHKNLKYHR 841
Query: 127 MP-----IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE---- 177
P ++ P +N++ S T +++ + T ++ + W +L
Sbjct: 842 TPREAMCLLGWHSPTLNTALTASVPTTKIISAELCQATT---QLSRDGTSWQSLLSIPDS 898
Query: 178 ---------PYLFFESYRNY--LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGK 226
F S+R++ L+V A+ + GW+ESR L + + + +
Sbjct: 899 SHSKNMTPGASNFLGSFRSFINLRVHYWGASLERGSRLVGWLESRCASLLVDVNKRV-PE 957
Query: 227 LQCHPYPHEYVDTSKPCA-------HCAFFMGLQ-----RKPGEVVQEGQQFDIRGSVEE 274
L +P +VD+S A ++ +GL+ KP + E ++R +++
Sbjct: 958 LSARIWPARFVDSSSSEAKGTQGDYQGSYLVGLEWMNSDEKPSKDDLEAAHSNLRAVLQQ 1017
Query: 275 FK 276
F+
Sbjct: 1018 FE 1019
>gi|451855249|gb|EMD68541.1| hypothetical protein COCSADRAFT_178345 [Cochliobolus sativus ND90Pr]
Length = 1226
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 37/251 (14%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
++R L R + + +P+ F R +K W +RG+Y+ G+LGG++ L+++ V
Sbjct: 765 SLRKLKPYRDLLYLQRTIPSRSLFRQAYRLIKLWGVQRGLYAAKFGYLGGMHITLMLSWV 824
Query: 71 CQLYPNAVPSM----LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH 126
C+ + V S+ +V FF+ Y + W N ++ A F PR NR +
Sbjct: 825 CKSLAHDVGSVNVADIVVSFFQHYANFDWSNDMVYDAF------FHKKKPRYNRSTR-EP 877
Query: 127 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF--------EP 178
M I++ P N + + L++++ +F+ + E + W F +P
Sbjct: 878 MVILSFHAPNSNFAQKSTVPGLQMLIKEFKAADMKLSEPGMT---WQKFFSTSSDLALKP 934
Query: 179 YL------FFESYRNYLQVDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKL 227
L F +Y +++++DI + A L+ GWVESR + + I + G
Sbjct: 935 CLPSGVVEFLNAYSDFVKIDIQFWGRMLAKGKGLV---GWVESRCISIVVDIHKALPGS- 990
Query: 228 QCHPYPHEYVD 238
+ +P + D
Sbjct: 991 EVRVWPALFTD 1001
>gi|291441787|ref|ZP_06581177.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
14672]
gi|291344682|gb|EFE71638.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
14672]
Length = 973
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 95/255 (37%), Gaps = 26/255 (10%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTL-RCLKFWAKRRGVYSNVTGFLGGVNWA 64
++D+ +L+ AD + V + T L R +K WA RG+ S G L G+ W+
Sbjct: 707 ELDQAAAIALSAVSDADAVRAAVGDHHTAFTRLARQVKAWAGARGLDSAPFGGLPGLAWS 766
Query: 65 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
+L AR + ++ L+ FF + W W +PV L
Sbjct: 767 VLAARTAREATDSAAPDLLRHFFGTWAAWDWRDPVGLAPTGTGP---------------- 810
Query: 125 HHMPII--TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICE-EVELNKAQWSALFEPYLF 181
H P++ TP P N + V ++ D+ TI E + + W L P
Sbjct: 811 -HTPVVLMTPTDPVRNCTGQVGAGFRDLLTDELYRAWTILETAADADTNPWPELLSPPSL 869
Query: 182 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 241
+ + + + A++ G V RLR L +E P P E +
Sbjct: 870 HRRHAAWAVLTVRPGPAEEFEETSGRVRGRLRALLTALEDAGAADAYAWPRPFE----TG 925
Query: 242 PCAHCAFFMGLQRKP 256
P + +GL R P
Sbjct: 926 P-GFVRYAIGLGRTP 939
>gi|344252871|gb|EGW08975.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 384
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 150 VMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVE 209
V +++F+ G I +E+ L+KA+WS FE FF+ ++Y+ + A L W G VE
Sbjct: 2 VAVEEFKQGLAITDEILLSKAKWSKFFEAPNFFQKCKHYIVLLASAPTEKQRLEWVGLVE 61
Query: 210 SRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIR 269
S++R L +E++ + L H P E+ + +GL K E E D+
Sbjct: 62 SKIRILVGSLEKNEFITL-AHVNP-EF--------RTIWVIGLVFKKTE-NSENLNVDLT 110
Query: 270 GSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFPEGYKRTRH 315
++ F + +IN MF + M+ H++RKQ +P YV KR +H
Sbjct: 111 YDIQSFMDTVYRQAINSKMF-ELDMKTAAMHVKRKQLHQLLPSYVL---QKRKKH 161
>gi|320590446|gb|EFX02889.1| duf455 domain containing protein [Grosmannia clavigera kw1407]
Length = 498
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 101/237 (42%), Gaps = 48/237 (20%)
Query: 35 CTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP-----------NAVPSMLV 83
T R +K WA+ RG+Y+ G+LGG+ A+L+ARV +L +AVP +L
Sbjct: 51 ATAYRSIKTWARSRGLYAARFGYLGGIQIAVLLARVMKLMAAATDDDDDDDSSAVPDILA 110
Query: 84 SRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAY--PCMNSSY 141
+ FFR Y + W + A D G K +T P++ Y P +N+S
Sbjct: 111 T-FFRDYAGFDWATQM---AFDPFFHG------HKAPHVRTAGEPLVILGYHRPQLNTSM 160
Query: 142 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE-------------------PYLFF 182
+ S S++RV+ + + + + + W A F
Sbjct: 161 SASVSSVRVLAAELRRADRLLSA---GRISWDAFLGGGGDEGDSSTIVAGRLLSGAATFV 217
Query: 183 ESYRNYLQVDI--VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 237
+YR Y+++D+ + ++ GW+ESR L + + R +L H +P +V
Sbjct: 218 CAYRTYVKIDLQYWGLSLQRGASFVGWLESRCAMLLVDVAR-RLPQLNTHIWPGRFV 273
>gi|346325053|gb|EGX94650.1| DUF455 domain protein [Cordyceps militaris CM01]
Length = 1223
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 102/244 (41%), Gaps = 30/244 (12%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
T+ L R +L+ +P++ F +K WA RG+Y G LGG++ +L+ +
Sbjct: 753 TLAKLKPARDMYYLLRSIPDLAKFRVAFLMIKAWASSRGIYGARFGLLGGIHITVLLVPI 812
Query: 71 CQ----LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH 126
C+ L + +++ FF YT + W V+L EL R +T
Sbjct: 813 CKQLATLSRVVSTTGILATFFSHYTNFDWEKQVVLDPFFHKEL----------RYHRTSR 862
Query: 127 MPIITPAY--PCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY----- 179
P + P +N++ ST T++ + + N++ + + W A+ P
Sbjct: 863 EPFCLLGWHAPALNTAMTASTPTVKSIATEISKTNSLLSQPGVT---WDAILGPVGAAVA 919
Query: 180 ---LFFESYRNYLQVD--IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH 234
F +++Y++VD ++ + GW+ESR + + + R L +P
Sbjct: 920 GVQDFLRGFKSYVKVDARFWGSSPSSGRKFLGWLESRCVAILVDMNRKAPALLP-RIWPG 978
Query: 235 EYVD 238
++D
Sbjct: 979 RFID 982
>gi|342879986|gb|EGU81216.1| hypothetical protein FOXB_08249 [Fusarium oxysporum Fo5176]
Length = 1207
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 42/253 (16%)
Query: 28 VPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ--LYPN--AVPSMLV 83
+P++ + +K WA+ RG+YS GFLGG++ ++L+ VC+ Y N P+ +V
Sbjct: 767 LPDMVQYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVPVCKAVAYENETVTPADIV 826
Query: 84 SRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAY--PCMNSSY 141
FF Y+ + W N ++ EL R ++T P+ + P +N++
Sbjct: 827 VTFFHYYSEFDWKNSMVFDPFFHKEL----------RYNRTFREPLCLIGWHAPALNTAP 876
Query: 142 NVSTSTLRVMMDQFQYGNTICE--------------EVELNKAQWSALFEPYLFFESYRN 187
S T+ + +F + E L Q A E F +++
Sbjct: 877 IASIPTVATISSEFGRAKRMLSDDDCIWGKLLGIEPETALGSVQAPAATE---FLHAFKT 933
Query: 188 YLQVD--IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD------T 239
Y+++D + + + GW+ESR L + I R L +P ++D T
Sbjct: 934 YIKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDINR-KLKHLLARIWPSRFLDVSAGAET 992
Query: 240 SKPCAHCAFFMGL 252
S H + +GL
Sbjct: 993 SGAEYHGCYLIGL 1005
>gi|344256545|gb|EGW12649.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 349
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 21/180 (11%)
Query: 150 VMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVE 209
VM+++ + G I +E+ L+KA+WS LFE FF+ Y++Y+ + A L VE
Sbjct: 2 VMVEELKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAHTEKQRLECVDLVE 61
Query: 210 SRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQ 264
S++ L +E++ + KL Q P P + D K + +GL K E E
Sbjct: 62 SKICILVGSLEKNEFIKLAHVNPQSFPAPKDNPD--KEEFRTMWVIGLVFKKTE-NSENL 118
Query: 265 QFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFPEGYKRTRH 315
D+ ++ F +IN MF + M+I H++RKQ +P ++ KR +H
Sbjct: 119 SVDLTYDIQSFTDTVYSQAINSKMF-ELDMKIAAMHVKRKQLHQLLPSHML---QKRKKH 174
>gi|367045862|ref|XP_003653311.1| hypothetical protein THITE_2047808 [Thielavia terrestris NRRL 8126]
gi|347000573|gb|AEO66975.1| hypothetical protein THITE_2047808 [Thielavia terrestris NRRL 8126]
Length = 1221
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 44/255 (17%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
T+ L R D I + VP++ F R +K WAK RG+YS GFL G+ ++L+ARV
Sbjct: 750 TLSKLKAVRDVDYIRRSVPDLAAFRLAHRFIKTWAKSRGIYSARFGFLSGIQISILLARV 809
Query: 71 CQLY-----PNAVPSMLVSRFFRVYTMWRW-PNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
+L P +V +L + FF Y + W P L ++ +T
Sbjct: 810 QKLLARESGPCSVEDLLAT-FFTHYAAFDWSARPAFDPLFHRHRLPYT----------RT 858
Query: 125 HHMPIITPAY--PCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL-- 180
P+ Y P +N++ S +++ + +F+ + + S+ +P+
Sbjct: 859 PREPLAVLGYFPPSLNTAAAASVPSVKTLAAEFRRAGAAFLSSSSSSSS-SSSSDPHPAR 917
Query: 181 -------------FFESYRNYLQVDIV-----AANADDLLAWKGWVESRLRQLTLMIERD 222
F ++R+Y+++D+ A LL GW+ESR L + + R
Sbjct: 918 SWSSLAAPSAASDFLAAHRSYVRLDVQYWGLPRARGAQLL---GWLESRCAALLVDLHRR 974
Query: 223 TYGKLQCHPYPHEYV 237
G L +P +V
Sbjct: 975 APG-LHARMWPGRFV 988
>gi|46110072|ref|XP_382094.1| hypothetical protein FG01918.1 [Gibberella zeae PH-1]
Length = 1200
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 113/269 (42%), Gaps = 41/269 (15%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
T+ L R + + +P++ + +K WA+ RG+YS GFLGG++ ++L+ +
Sbjct: 742 TLAKLKPVRDLFYLRRSLPDMVQYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVPI 801
Query: 71 CQLYPNA----VPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH 126
C+ + P+ +V FFR Y+ + W ++ +L R ++T
Sbjct: 802 CKALASGSETVSPTDIVVTFFRHYSNFDWKTSMVFDPFFHKDL----------RYNRTFR 851
Query: 127 MPIITPAY--PCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF-------- 176
P+ + P +N++ S T+ + + + N + E N W+++
Sbjct: 852 EPLCLIGWHAPALNTAPIASNPTVMTIAAEIERANRLLSE---NGCTWNSVLGLQSAQEA 908
Query: 177 ----EPYLFFESYRNYLQVD--IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCH 230
F + ++ Y+++D + + + GW+ESR L + + R L
Sbjct: 909 GKSRGATEFLKEFKTYIKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDVNRK-LQHLVAR 967
Query: 231 PYPHEYVDTSKPCA-------HCAFFMGL 252
+P ++DTS A H + +GL
Sbjct: 968 IWPSRFLDTSSGGAGGPGEEYHGCYLIGL 996
>gi|358389108|gb|EHK26701.1| hypothetical protein TRIVIDRAFT_59177 [Trichoderma virens Gv29-8]
Length = 1215
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 111/252 (44%), Gaps = 39/252 (15%)
Query: 12 VRSLNGCRVADQILKL---VPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 68
V+S+ + A ++ L +P++ + +K WA+ RG+YS G LGG++ L+
Sbjct: 751 VQSIAKLKPARDLVYLRRSIPDMTKYRVAHLFIKAWAQSRGLYSAKFGLLGGIHITSLLV 810
Query: 69 RVCQLYPN----AVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
VC+ N A + +++ FF Y+ + W V V+DP +R K
Sbjct: 811 PVCKALANEPEAASTADILTSFFYHYSTFDWETGV-------------VFDPFYHRDLKY 857
Query: 125 HHM---PIITPAY--PCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW------- 172
H P+ + P +N++ + S ST+ + + + + + +++
Sbjct: 858 HRTFREPLCLLGWHGPSLNTASSASISTVNALASELTRAAALLSQDGMTWSKFLGLELSG 917
Query: 173 --SALFEPYL--FFESYRNYLQVDIV--AANADDLLAWKGWVESRLRQLTLMIERDTYGK 226
S+L E F +SY+ Y+++ ++ + GW+ESR + + I R T G
Sbjct: 918 TPSSLIEKGAADFLDSYQTYIKISARYWGSSQQKGRKYLGWLESRFISILVDISRKTLG- 976
Query: 227 LQCHPYPHEYVD 238
L +P ++D
Sbjct: 977 LVPRIWPARFID 988
>gi|226295206|gb|EEH50626.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 1228
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 12/174 (6%)
Query: 4 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L D+ ++ L R + + + N F R +K WAK RG+YS+ G+LGG++
Sbjct: 777 LFDLAYLSLVKLQPYRDQTYLQRTIKNPAMFRLLHRVIKAWAKSRGIYSSRFGYLGGIHI 836
Query: 64 ALLVARVCQLYPNAVPSM--LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 121
L+++R+ +L P S+ ++ FF Y + W ++ ++ F PR NR
Sbjct: 837 TLMLSRLLKLLPPNTTSVADILRTFFNHYADFYWMEGMVY------DMNFHRKQPRYNRS 890
Query: 122 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE---VELNKAQW 172
+ M I+T YP MN + S S++R ++D+ +T+ E +++N W
Sbjct: 891 PR-ECMVILTLHYPIMNVARTASISSMRTIVDEMNRADTLISEGRYIKINVQYW 943
>gi|226500652|ref|NP_001146769.1| uncharacterized protein LOC100280371 [Zea mays]
gi|219888671|gb|ACL54710.1| unknown [Zea mays]
Length = 214
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 281 MYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ--TGSGLK 338
MY WKPGM++ V+H+ R+Q+P YVF +GYK+ A+QQ S+ + S LK
Sbjct: 1 MYSLWKPGMDLAVTHVHREQVPSYVFEQGYKKPCPTMHANQQEQSDGDGTFSPYLESQLK 60
Query: 339 RKKDPES---VDQDGPEKRQSISP 359
RK + VD KR S+SP
Sbjct: 61 RKYISDGDGHVDLCKSVKRASVSP 84
>gi|297726257|ref|NP_001175492.1| Os08g0278750 [Oryza sativa Japonica Group]
gi|255678316|dbj|BAH94220.1| Os08g0278750, partial [Oryza sativa Japonica Group]
Length = 103
Score = 60.5 bits (145), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 5/65 (7%)
Query: 68 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI--DEAELGFSVWDPRKNRR--DK 123
ARV L P +PSML+ RFFRV+ W+WP+PVMLCAI D+ ELG R +R +
Sbjct: 28 ARVPVL-PQRLPSMLLPRFFRVFARWKWPSPVMLCAIEHDDGELGLKRHPARHHRAACRR 86
Query: 124 THHMP 128
H+P
Sbjct: 87 QRHLP 91
>gi|325090905|gb|EGC44215.1| DUF455 domain-containing protein [Ajellomyces capsulatus H88]
Length = 1256
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 135/319 (42%), Gaps = 55/319 (17%)
Query: 26 KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM--LV 83
+ + N F R +K WAK RG+YS+ G+LGG++ L+++R+ +L P S ++
Sbjct: 800 RTIQNPATFRLLHRIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLLKLLPPNPGSAADIL 859
Query: 84 SRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNV 143
FF Y + W + I + P +N R M I T P +N + +
Sbjct: 860 CTFFNHYGNFNWEKDAVYDPIFHEK-------PPRNYRPPREGMIIFTLHTPIINVARST 912
Query: 144 STSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY-------------LFFESYRNYLQ 190
S ++R ++D+ + + E A W+ L Y F +SY +Y++
Sbjct: 913 SIPSMRKIVDEMKRAENLISE---GNANWAELLGIYPKTGKSALSSSADEFLKSYNSYIK 969
Query: 191 VDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV-----DTS 240
+++ A L+ GWVESR L + R+ + +Q +P + + S
Sbjct: 970 INVQYWSLSLAKGSSLV---GWVESRCLDLLDDLYRE-FPDIQARIWPARFTQNEDHENS 1025
Query: 241 KPCA-----HCAFFMGLQ---------RKPGEVVQEGQQFDIRGSVEEFKLSI--NMYMF 284
P + +GL+ R ++ ++ Q ++ S+++F S+ N F
Sbjct: 1026 TPAQEEHEYQGCYLIGLRKADHATDPTRTFSKLDRKLAQDTLQASMDQFASSVQSNKKYF 1085
Query: 285 WKPGMEICVSHIRRKQIPP 303
+ V+H+++ + P
Sbjct: 1086 NLASAWVDVTHVKQDSLGP 1104
>gi|240274573|gb|EER38089.1| DUF455 domain-containing protein [Ajellomyces capsulatus H143]
Length = 1256
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 135/319 (42%), Gaps = 55/319 (17%)
Query: 26 KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM--LV 83
+ + N F R +K WAK RG+YS+ G+LGG++ L+++R+ +L P S ++
Sbjct: 800 RTIQNPATFRLLHRIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLLKLLPPNPGSAADIL 859
Query: 84 SRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNV 143
FF Y + W + I + P +N R M I T P +N + +
Sbjct: 860 CTFFNHYGNFNWEKDAVYDPIFHEK-------PPRNYRPPREGMIIFTLHTPIINVARST 912
Query: 144 STSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY-------------LFFESYRNYLQ 190
S ++R ++D+ + + E A W+ L Y F +SY +Y++
Sbjct: 913 SIPSMRKIVDEMKRAENLISE---GNANWAELLGIYPKTGKSALSSSADEFLKSYNSYIK 969
Query: 191 VDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV-----DTS 240
+++ A L+ GWVESR L + R+ + +Q +P + + S
Sbjct: 970 INVQYWSLSLAKGSSLV---GWVESRCLDLLDDLYRE-FPDIQARIWPARFTQNEDHENS 1025
Query: 241 KPCA-----HCAFFMGLQ---------RKPGEVVQEGQQFDIRGSVEEFKLSI--NMYMF 284
P + +GL+ R ++ ++ Q ++ S+++F S+ N F
Sbjct: 1026 TPAQEKHEYQGCYLIGLRKADHATDPTRTFSKLDRKLAQDTLQASMDQFASSVQSNKKYF 1085
Query: 285 WKPGMEICVSHIRRKQIPP 303
+ V+H+++ + P
Sbjct: 1086 NLASAWVDVTHVKQDSLGP 1104
>gi|119186269|ref|XP_001243741.1| hypothetical protein CIMG_03182 [Coccidioides immitis RS]
Length = 1172
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
D+ + L R D I + +P++ F T R + WAK RGVY + G+LGG++ +
Sbjct: 775 DLSYQALTKLQAFRDLDYIRRSIPDLAAFRTAHRFITAWAKHRGVYLSRFGYLGGIHITM 834
Query: 66 LVARVCQLYPNAV---PSMLVSRFFRVYTMWRWPNPVML 101
+++RV +L+ V + ++ RFF+ Y + W + +
Sbjct: 835 MLSRVFKLFCGEVRVTSTDMIYRFFQYYADFDWEHKTVF 873
>gi|408391246|gb|EKJ70626.1| hypothetical protein FPSE_09136 [Fusarium pseudograminearum CS3096]
Length = 1200
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 111/266 (41%), Gaps = 35/266 (13%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
T+ L R + + +P++ + +K WA+ RG+YS GFLGG++ ++L+ +
Sbjct: 742 TLAKLKPVRDLFYLRRSLPDMVQYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVPI 801
Query: 71 CQLYPNA----VPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH 126
C+ + P+ +V FFR Y+ + W ++ +L R ++T
Sbjct: 802 CKALASGSEIVSPTDIVVTFFRHYSNFDWKTSMVFDPFFHKDL----------RYNRTFR 851
Query: 127 MPIITPAY--PCMNSSYNVSTSTLRVMMDQFQYGNTICEE--------VELNKAQWSALF 176
P+ + P +N++ S T+ + + + N + E + L AQ +
Sbjct: 852 EPLCLIGWHAPALNTAPIASNPTVMAIAAEIERANRLLSEDGCTWNSVLGLQSAQEAGKS 911
Query: 177 EPYL-FFESYRNYLQVD--IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP 233
F + ++ Y+++D + + + GW+ESR L + + R L +P
Sbjct: 912 RGATEFLKEFKTYVKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDVNR-KLQHLVARIWP 970
Query: 234 HEYVDTSKPCA-------HCAFFMGL 252
++D A H + +GL
Sbjct: 971 SRFIDVFSGGAGGPGEEYHGCYLIGL 996
>gi|456389475|gb|EMF54915.1| hypothetical protein SBD_4583 [Streptomyces bottropensis ATCC
25435]
Length = 930
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 84/223 (37%), Gaps = 30/223 (13%)
Query: 34 FCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMW 93
F R +K WA+ RG+ S G L G+ W++L AR + P L+ FF + W
Sbjct: 704 FAGLARQVKAWARARGLDSAPFGGLPGLAWSVLAARTVSEAGDLPPDGLLRHFFATWAAW 763
Query: 94 RWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMD 153
W PV L + I+TP+ P + V+T ++
Sbjct: 764 DWREPVGGPGGTSGRLPLT----------------IVTPSAPVRPCTDQVTTGMRDLITQ 807
Query: 154 QFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLR 213
+ + EE + W+ L P + + V + A +A +G V R+R
Sbjct: 808 ELFRAWELLEE----GSSWADLLTPPPLHRRHAAWAIVTVGGGPAG--VADEGRVRGRMR 861
Query: 214 QLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP 256
L + G CH +P + T+ P + +GL P
Sbjct: 862 ALVTDLAEVAPG---CHAWPRPF--TTAPARYA---IGLGPTP 896
>gi|400596352|gb|EJP64126.1| endonuclease/Exonuclease/phosphatase protein [Beauveria bassiana
ARSEF 2860]
Length = 1233
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 104/266 (39%), Gaps = 40/266 (15%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
T+ L R +L+ +P++ F +K WA RG+Y G L G++ +L+ +
Sbjct: 760 TLAKLKPARDLYYLLRSIPDLAKFRVAFLFIKAWASSRGIYGARFGLLSGIHITVLLVPI 819
Query: 71 CQLYPNAVPSMLVS------RFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 124
C+ A SM VS FF Y W V+L EL R +T
Sbjct: 820 CKQL--AAISMAVSTTDILTTFFSHYADLEWETHVVLDPFYHREL----------RYHRT 867
Query: 125 HHMPIITPAY--PCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL-- 180
P + P +N++ ST T++ + + N++ + A W + P
Sbjct: 868 SREPFCLLGWHAPALNTAMAASTPTVKSIAAELSKANSLLSQ---PGATWGTILGPASTA 924
Query: 181 ------FFESYRNYLQVD--IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 232
F +++++Y+++D + + W+ESR + + R L +
Sbjct: 925 ASGVRDFLQNFKSYVKIDARFWGPSPSSGRKFLSWLESRCVAVLADMTRKA-PSLLPRLW 983
Query: 233 PHEYVD------TSKPCAHCAFFMGL 252
P ++D + HC + +GL
Sbjct: 984 PGRFIDRPNTDTVTGSEYHCFYLIGL 1009
>gi|290958156|ref|YP_003489338.1| hypothetical protein SCAB_36991 [Streptomyces scabiei 87.22]
gi|260647682|emb|CBG70787.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 925
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 87/224 (38%), Gaps = 33/224 (14%)
Query: 34 FCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMW 93
F R +K WA+ RG+ S G L G+ W++L AR + PS L+ FF + W
Sbjct: 700 FAGLARQVKAWARARGLDSAPFGGLPGLAWSVLAARTAGEAGDLPPSCLLRHFFATWAAW 759
Query: 94 RWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMD 153
W PV ++ A G + + TP+ P + + V+ ++
Sbjct: 760 DWREPV--GGLEGAPAG---------------PLTVATPSAPVRSCTDQVTADMRDLITQ 802
Query: 154 QFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD-DLLAWKGWVESRL 212
+ + EE A W+ + P +R + +V A A D + +G V R+
Sbjct: 803 ELFRAWELLEE----GASWTEVLAPPPL---HRRHAAWAVVTAGAGTDGVVDEGRVRGRM 855
Query: 213 RQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP 256
R L + G CH +P + A + +GL P
Sbjct: 856 RALITDLAGLAPG---CHAWPRPFA-----TAPVRYAIGLGPTP 891
>gi|433605790|ref|YP_007038159.1| Polynucleotide adenyltransferase [Saccharothrix espanaensis DSM
44229]
gi|407883643|emb|CCH31286.1| Polynucleotide adenyltransferase [Saccharothrix espanaensis DSM
44229]
Length = 892
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 95/245 (38%), Gaps = 34/245 (13%)
Query: 21 ADQILKLVPN-VEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVP 79
A+ +L V + V+ F R +K WA+ RG+ S G + GV WA+L AR +
Sbjct: 655 AEAVLAAVGDRVDRFRRLAREVKGWARARGLDSAPFGGVPGVGWAVLAARTVLDAGDGFD 714
Query: 80 SMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 139
++ FF + W W +P+ L A+ E G V I+TPA P +
Sbjct: 715 GGGLAEFFGTWAAWDWRDPIGLGAVPE-RTGAPV--------------TIMTPAAPVRSC 759
Query: 140 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 199
+ V ++ + + E + A P L +R + +V D
Sbjct: 760 TEQVGPGFRDLLTAELYRAWEVVEAGGTDLAT-----PPDL----HRVHAAWAVVTVPHD 810
Query: 200 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEV 259
+ G V RLR L +E P P E + F +GL R+P +V
Sbjct: 811 RV----GPVRGRLRALLTALETAGVADADAWPRPFERDRDA-----VRFAIGLGRRPPDV 861
Query: 260 VQEGQ 264
+ G+
Sbjct: 862 AELGR 866
>gi|322692951|gb|EFY84832.1| Poly(A) polymerase type 3 [Metarhizium acridum CQMa 102]
Length = 274
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 88/189 (46%), Gaps = 26/189 (13%)
Query: 41 LKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLY----PNAVPSMLVSRFFRVYTMWRWP 96
LK WAK RG+YS+ G LG +N ++++ +C+L P+A + +++ FF Y + W
Sbjct: 11 LKAWAKSRGLYSSKLGLLGSLNISVMLVPICKLLAYDGPSAGTTDILTTFFHHYRNFDWK 70
Query: 97 NPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQ 156
++L + + K R + M ++ P N++ N + ST+ ++ +
Sbjct: 71 TNMVLDPLFHGTV--------KYHRTQRESMCLLGWHTPSRNTALNATASTIHILSAEIM 122
Query: 157 YGNTICEEVELN-----KAQWSALFEPYL-------FFESYRNYLQVD--IVAANADDLL 202
+ + + +N + S L P L F +S++ Y++++ + +
Sbjct: 123 RASDLLSQEGVNWDTFLRGTQSLLPFPELTACNAAGFLDSHKCYIKMNASYLGCSPRKGK 182
Query: 203 AWKGWVESR 211
+ GW+ESR
Sbjct: 183 RFVGWLESR 191
>gi|351712642|gb|EHB15561.1| Poly(A) polymerase gamma [Heterocephalus glaber]
Length = 528
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 30/38 (78%)
Query: 119 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQ 156
N D+ H MPIITPAYP NS+YNVSTST VM+++F+
Sbjct: 216 NPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFK 253
>gi|46805211|dbj|BAD17691.1| unknown protein [Oryza sativa Japonica Group]
Length = 285
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 27/32 (84%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLK 42
TVRSLNG RVAD+IL+LVP+ F TTLRC+K
Sbjct: 32 TVRSLNGVRVADEILRLVPDAAAFHTTLRCVK 63
>gi|62733224|gb|AAX95341.1| hypothetical protein [Oryza sativa Japonica Group]
gi|77552690|gb|ABA95487.1| expressed protein [Oryza sativa Japonica Group]
Length = 347
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 27/32 (84%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLK 42
TVRSLNG RVAD+IL+LVP+ F TTLRC+K
Sbjct: 158 TVRSLNGVRVADEILRLVPDAATFHTTLRCVK 189
>gi|254385996|ref|ZP_05001313.1| hypothetical protein SSAG_05655 [Streptomyces sp. Mg1]
gi|194344858|gb|EDX25824.1| hypothetical protein SSAG_05655 [Streptomyces sp. Mg1]
Length = 649
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 86/241 (35%), Gaps = 58/241 (24%)
Query: 21 ADQILKLVPNVEH--FCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ----LY 74
AD + + V EH F R +K WA+ RG+ S G L G+ WA+L AR + L
Sbjct: 399 ADAVRESV-GAEHAAFARLAREVKAWARARGLDSAPFGGLPGIAWAVLAARTVREAAALS 457
Query: 75 PNAVP------SMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 128
P+ + L+ FF + W W +PV L HH P
Sbjct: 458 PDGLSPDGLSLDGLLREFFGAWAAWDWCDPVAL-----------------------HHPP 494
Query: 129 ----------IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP 178
++TP+ P + + V LR ++ + EL +A S P
Sbjct: 495 PAPGSEGAVTVLTPSEPVRSCTAQVGPG-LRDLLGR-----------ELYEAWESPQAGP 542
Query: 179 YLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 238
+ + V + A + G RLR L +E + P P E D
Sbjct: 543 PAPHRRHAAWAVVTVRGATPQEFEESLGRTRGRLRALLGALEEGGVAEAHAWPRPFERGD 602
Query: 239 T 239
T
Sbjct: 603 T 603
>gi|47496915|dbj|BAD19964.1| hypothetical protein [Oryza sativa Japonica Group]
gi|47497725|dbj|BAD19790.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 266
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 7 VDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLK 42
+D T RSLNG RVAD+IL+LVP+ + F TTLRC+K
Sbjct: 58 LDLATARSLNGVRVADEILRLVPDADVFHTTLRCVK 93
>gi|297725915|ref|NP_001175321.1| Os07g0658500 [Oryza sativa Japonica Group]
gi|255678036|dbj|BAH94049.1| Os07g0658500 [Oryza sativa Japonica Group]
Length = 319
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 27/32 (84%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLK 42
TVR+LNG RVAD+IL+LVP+ F TTLRC+K
Sbjct: 135 TVRNLNGVRVADEILRLVPDAAAFHTTLRCVK 166
>gi|358342231|dbj|GAA49742.1| poly(A) polymerase [Clonorchis sinensis]
Length = 373
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 158 GNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTL 217
G T+ + L+K WS LFEP FF YR+Y+ V + + L G VESRLR L
Sbjct: 32 GLTVSSDALLHKQPWSNLFEPAFFFR-YRHYVVVIVTGSAKRSFLELCGLVESRLRVLVS 90
Query: 218 MIERDTYGKL---QCHPY 232
E + Y K+ C Y
Sbjct: 91 NFELNRYVKIAHVNCRSY 108
>gi|358396858|gb|EHK46233.1| hypothetical protein TRIATDRAFT_89627 [Trichoderma atroviride IMI
206040]
Length = 1209
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 102/235 (43%), Gaps = 35/235 (14%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
T+ L R + + +P++ + +K WA+ RG+Y+ G LGG++ + ++ +
Sbjct: 749 TLAKLKPARDLFYLRRSIPDMTKYRVAHLFIKAWAQSRGLYAAKYGMLGGIHISSMLVPI 808
Query: 71 CQLYPNAVPSM----LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKN---RRDK 123
C+ N ++ +++ FF+ Y+ + W E G V+DP + + +
Sbjct: 809 CKALANESEAVSTADILTTFFQHYSKFNW------------ETGM-VFDPFYHLGLKYHR 855
Query: 124 THHMPIITPAY--PCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL- 180
T P+ + P +N++ S ST+ + + + + ++ +++ L +
Sbjct: 856 TFREPLCLLGWHGPSLNAASTASISTVNALTSELVRAAALFHQQDVTWSRFLGLEQSATP 915
Query: 181 ----------FFESYRNYLQVDIV--AANADDLLAWKGWVESRLRQLTLMIERDT 223
F SYR+Y+++ ++ + GW+ESR + + I R +
Sbjct: 916 LTLIEKGAADFLNSYRSYIKISARYWGSSQQKGRKYLGWLESRCISILVDISRKS 970
>gi|429200719|ref|ZP_19192393.1| Tat pathway signal sequence domain protein [Streptomyces ipomoeae
91-03]
gi|428663602|gb|EKX62951.1| Tat pathway signal sequence domain protein [Streptomyces ipomoeae
91-03]
Length = 985
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 76/212 (35%), Gaps = 35/212 (16%)
Query: 34 FCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMW 93
F R +K WA+ RG+ S G L G+ W++L AR + P L+ FF + W
Sbjct: 757 FARLARQVKAWARARGLDSAPFGGLPGLAWSVLAARTAGEAGDLPPYDLLRHFFATWAAW 816
Query: 94 RWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP--IITPAYPCMNSSYNVSTSTLRVM 151
W PV ++H +P I TP+ P + V+ ++
Sbjct: 817 DWRTPVGPAG-------------------QSHALPLTITTPSAPIRPCTDQVTAGMRDLV 857
Query: 152 MDQFQYGNTICEEVELN---KAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWV 208
+ + E + + W+ L P +R + +V A G
Sbjct: 858 TQELFRAWEVLEGAPTDPTARYPWAELLAPPPL---HRRHAAWAVVTAG-------PGAD 907
Query: 209 ESRLRQLTLMIERDTYGKL-QCHPYPHEYVDT 239
E RLR T + D CH +P + T
Sbjct: 908 EGRLRGRTRSLITDLAETTPDCHAWPRPFTTT 939
>gi|218186213|gb|EEC68640.1| hypothetical protein OsI_37050 [Oryza sativa Indica Group]
Length = 248
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 26/32 (81%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLK 42
TVRSLNG RVAD+IL LVP+ F TTLRC+K
Sbjct: 111 TVRSLNGVRVADEILWLVPDAAAFHTTLRCVK 142
>gi|253747873|gb|EET02347.1| Hypothetical protein GL50581_387 [Giardia intestinalis ATCC 50581]
Length = 609
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTL----RCLKFWAKRRGVYSNVTGFLGGV 61
++ E ++ SLNG R + F T R L+ W+KR+ +YSN GF GG+
Sbjct: 198 NMHEKSILSLNGYRTNIHVKSQFAGNNAFYNTFQNAVRALRLWSKRKNIYSNRCGFFGGI 257
Query: 62 NWALLVARV 70
N +LVA V
Sbjct: 258 NCIILVANV 266
>gi|46806537|dbj|BAD17650.1| unknown protein [Oryza sativa Japonica Group]
gi|125581350|gb|EAZ22281.1| hypothetical protein OsJ_05937 [Oryza sativa Japonica Group]
Length = 169
Score = 49.3 bits (116), Expect = 0.005, Method: Composition-based stats.
Identities = 23/32 (71%), Positives = 27/32 (84%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLK 42
TVRSLNG RVAD+IL+LVP+ F TTLRC+K
Sbjct: 42 TVRSLNGVRVADKILRLVPDAAAFHTTLRCVK 73
>gi|297192707|ref|ZP_06910105.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis
ATCC 25486]
gi|297151463|gb|EFH31180.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis
ATCC 25486]
Length = 359
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 5 NDVDEPTVRSLNGCRVADQILKLVPNV-EHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
++ E +L+ AD +L V + E F R +K WAK RG+ S G L G+ W
Sbjct: 113 TELGEDAAIALSAVSDADALLDQVADRREAFTDLARRVKAWAKARGLDSAPFGGLPGLAW 172
Query: 64 ALLVARVCQLYPNAVPS-MLVSRFFRVYTMWRWPNPV 99
++L AR + A+PS L+ FF + W W PV
Sbjct: 173 SVLAARTVR-EAGALPSDELLRHFFATWAAWDWREPV 208
>gi|159109295|ref|XP_001704913.1| Hypothetical protein GL50803_13749 [Giardia lamblia ATCC 50803]
gi|157432988|gb|EDO77239.1| hypothetical protein GL50803_13749 [Giardia lamblia ATCC 50803]
Length = 674
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTL----RCLKFWAKRRGVYSNVTGFLGGV 61
++ E ++ SLNG R + F +T R L+ W KR+ +YSN GF GG+
Sbjct: 255 NMHEKSILSLNGYRTNIHVKSQFAGNNIFYSTFQNAVRALRLWCKRKNIYSNRCGFFGGI 314
Query: 62 NWALLVARV 70
N +LVA V
Sbjct: 315 NCIILVANV 323
>gi|294939632|ref|XP_002782536.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239894204|gb|EER14331.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 157
Score = 48.5 bits (114), Expect = 0.008, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 168 NKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL 227
N+ W+ L P+ FF+ YR +L ++I A L +KG VESR+R L +E K+
Sbjct: 16 NEVTWADLCAPFPFFQVYRQFLLLEISAETEKAFLKFKGLVESRIRVLVKNLETCCGHKV 75
Query: 228 QCHPYP 233
P+P
Sbjct: 76 LPQPHP 81
>gi|308160310|gb|EFO62803.1| Poly(A) polymerase, putative [Giardia lamblia P15]
Length = 617
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTL----RCLKFWAKRRGVYSNVTGFLGGV 61
++ E ++ SLNG R + F +T R L+ W KR+ +YSN GF GG+
Sbjct: 198 NMHEKSILSLNGYRTNIHVKSQFAGNNIFYSTFQNAVRALRLWCKRKNIYSNRCGFFGGI 257
Query: 62 NWALLVARV 70
N +LVA V
Sbjct: 258 NCIILVANV 266
>gi|218190338|gb|EEC72765.1| hypothetical protein OsI_06415 [Oryza sativa Indica Group]
Length = 608
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 25/32 (78%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLK 42
TVRSLNG VAD+IL+LVP+ TTLRC+K
Sbjct: 151 TVRSLNGVHVADEILRLVPDAAALHTTLRCVK 182
>gi|302532764|ref|ZP_07285106.1| polynucleotide adenyltransferase [Streptomyces sp. C]
gi|302441659|gb|EFL13475.1| polynucleotide adenyltransferase [Streptomyces sp. C]
Length = 430
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 54/134 (40%), Gaps = 15/134 (11%)
Query: 34 FCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR-VCQLYPNAV---PSMLVSRFFRV 89
F + R K WA+ RG+ S G L G+ WA+L AR V + +A P+ L FF
Sbjct: 194 FASLAREAKAWARARGLDSAPFGGLPGLAWAVLAARTVREAVRDAADLSPAGLRREFFGT 253
Query: 90 YTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLR 149
+ W W PV L D A R + ++TP P + + V
Sbjct: 254 WAAWDWSEPVSLLPADGA-----------GRSPSPDPVTVLTPRAPVRSCTAQVGPGMRD 302
Query: 150 VMMDQFQYGNTICE 163
+++ + + E
Sbjct: 303 LLVRELYRAWEVLE 316
>gi|356530683|ref|XP_003533910.1| PREDICTED: F-box/LRR-repeat protein 3-like [Glycine max]
Length = 134
Score = 47.0 bits (110), Expect = 0.026, Method: Composition-based stats.
Identities = 22/34 (64%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Query: 33 HFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 66
HF TTL CLKFWAK RG+YSNV FL + W L
Sbjct: 103 HFLTTLCCLKFWAKGRGIYSNV--FLVVLTWHFL 134
>gi|116196384|ref|XP_001224004.1| hypothetical protein CHGG_04790 [Chaetomium globosum CBS 148.51]
gi|88180703|gb|EAQ88171.1| hypothetical protein CHGG_04790 [Chaetomium globosum CBS 148.51]
Length = 891
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 80/197 (40%), Gaps = 36/197 (18%)
Query: 19 RVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ------ 72
R D + + +P+ F R +K WAK RG+Y+ GFL G+ ++L+ARV +
Sbjct: 637 RDTDYLARSLPDPPTFRLAHRAIKTWAKSRGIYAARFGFLSGIQISILLARVHKLLTRTT 696
Query: 73 -----LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR----DK 123
P L++ FF Y + W + +L F DP +R +
Sbjct: 697 TTTPTRTTPPTPETLLTTFFTHYATFDWAH----------QLAF---DPFFHRHALPYTR 743
Query: 124 THHMPIITPAY--PCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF----- 176
T P+ Y P N++ S + + + +F+ + E W+
Sbjct: 744 TPREPLAVLGYFAPARNTALAASVPSTKTLAAEFRRAADVLRG-ENGALGWAGFLGGGSG 802
Query: 177 EPYLFFESYRNYLQVDI 193
F ++R+Y+++D+
Sbjct: 803 AKDDFLAAHRSYVKLDV 819
>gi|376259447|ref|YP_005146167.1| dockerin-like protein [Clostridium sp. BNL1100]
gi|373943441|gb|AEY64362.1| dockerin-like protein [Clostridium sp. BNL1100]
Length = 504
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 438 VEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELEL--NAGLGSVLQSTSGI 495
+ G +++ SDC D D ++EN L A D +H EL+L N G +VL+S GI
Sbjct: 264 ITGGTLNITATSDCIDTDGDIIIENGTL-ALSAGDDGIHSELDLTFNGGTTTVLKSYEGI 322
Query: 496 DSETVVQKPVMRLSLTST 513
+ +TV +++T+T
Sbjct: 323 EGKTVTTVNNGTINITAT 340
>gi|125581305|gb|EAZ22236.1| hypothetical protein OsJ_05891 [Oryza sativa Japonica Group]
Length = 126
Score = 42.0 bits (97), Expect = 0.67, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 30/50 (60%), Gaps = 6/50 (12%)
Query: 11 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 60
TVRSLNG RVAD+IL+LVP+ F TT A R G+ + GF G
Sbjct: 32 TVRSLNGVRVADEILRLVPDAAAFHTTA------AVREGIDKLLRGFDGA 75
>gi|194696942|gb|ACF82555.1| unknown [Zea mays]
Length = 131
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
Query: 198 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPG 257
++L W GWV+SR R L L +E + G + C P P E VD + + FF GL
Sbjct: 2 GEELRDWVGWVKSRFRNLLLKLE--SLG-VYCDPDPSEQVDHTITDPNVVFFWGL----- 53
Query: 258 EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM---EICVSHIRRKQIPPYVFPEGYKRTR 314
+ + Q I E+F S+ ++ K +I +S + Q+P VF +
Sbjct: 54 -IYRRNIQICISSLKEDFMKSVCNNIYGKEKCAHSDITMSIVGPPQLPKSVFDLSVYSEK 112
Query: 315 HPR-LASQQRSSENGN 329
P+ + Q +N N
Sbjct: 113 LPQHMMGHQLMKQNYN 128
>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 20/26 (76%)
Query: 6 DVDEPTVRSLNGCRVADQILKLVPNV 31
+ +E TV SLNGCRV DQ L LVPN+
Sbjct: 690 ECNEQTVDSLNGCRVTDQFLHLVPNI 715
>gi|221484307|gb|EEE22603.1| 4-nitrophenylphosphatase, putative [Toxoplasma gondii GT1]
Length = 593
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 17/123 (13%)
Query: 324 SSENGNEYQTGSGLKRKKD---------PESVDQDGPEKRQSISPQKQDSLSPDHLAPSS 374
+S NG G L R+ D P ++ GPEK S+SP+ + LS D AP S
Sbjct: 20 ASSNGAMRSLGQRLSRQDDASGSCGSTCPAALSPSGPEKLHSLSPRAKSCLS-DSAAPPS 78
Query: 375 VRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEV------GSCEDVGNESVA 428
T + V+ + G + ++++V+T + SE G C G E V+
Sbjct: 79 ASPLTLTRTA-VLTGSVTFREVPRAGAEATSNAVVTCICSECVTRLTDGCCARCGRECVS 137
Query: 429 GSS 431
++
Sbjct: 138 AAT 140
>gi|431822613|gb|AGA84149.1| heparin binding antigen, partial [Neisseria meningitidis]
Length = 311
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 12/139 (8%)
Query: 312 RTRHPRLASQQR---SSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPD 368
R RHP SQ S+EN TG+G D + +GP+ + DSL+P+
Sbjct: 16 RARHPHKVSQDMAAVSAEN-----TGNGGAATTDKPKNEDEGPQNDMPQNAADTDSLTPN 70
Query: 369 HLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEVGSCEDVGNESVA 428
H ++ +G N P + + D++N+ E+ GN +
Sbjct: 71 HTTAPNMPAGNMGNQAPDTGESAQPENKP----DMANAGDGIQGDDPSAGGENAGNTAAQ 126
Query: 429 GSSEGNNGSVEGSNNPVSS 447
G+++ N GS NP SS
Sbjct: 127 GTNQAENNQAAGSQNPASS 145
>gi|237838251|ref|XP_002368423.1| 4-nitrophenylphosphatase, putative [Toxoplasma gondii ME49]
gi|211966087|gb|EEB01283.1| 4-nitrophenylphosphatase, putative [Toxoplasma gondii ME49]
Length = 593
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 17/123 (13%)
Query: 324 SSENGNEYQTGSGLKRKKD---------PESVDQDGPEKRQSISPQKQDSLSPDHLAPSS 374
+S NG G L R+ D P ++ GPEK S+SP+ + LS D AP S
Sbjct: 20 ASSNGAMRSLGQRLSRQDDASGSCGSTCPAALSPSGPEKLHSLSPRAKSCLS-DSAAPPS 78
Query: 375 VRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEV------GSCEDVGNESVA 428
T + V+ + G + +++ V+T + SE G C G E V+
Sbjct: 79 ASPLTLTRTA-VLTGSVTFREVPRAGAEATSNGVVTCICSECVTRLTDGCCARCGRECVS 137
Query: 429 GSS 431
++
Sbjct: 138 AAT 140
>gi|221505715|gb|EEE31360.1| 4-nitrophenylphosphatase, putative [Toxoplasma gondii VEG]
Length = 593
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 17/123 (13%)
Query: 324 SSENGNEYQTGSGLKRKKD---------PESVDQDGPEKRQSISPQKQDSLSPDHLAPSS 374
+S NG G L R+ D P ++ GPEK S+SP+ + LS D AP S
Sbjct: 20 ASSNGAMRSLGQRLSRQDDTSGSCGSTCPAALSPSGPEKLHSLSPRAKSCLS-DSAAPPS 78
Query: 375 VRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEV------GSCEDVGNESVA 428
T + V+ + G + +++ V+T + SE G C G E V+
Sbjct: 79 ASPLTLTRTA-VLTGSVTFREVPRAGAEATSNGVVTCICSECVTRLTDGCCARCGRECVS 137
Query: 429 GSS 431
++
Sbjct: 138 AAT 140
>gi|154175020|ref|YP_001407638.1| putative DNA methylase [Campylobacter curvus 525.92]
gi|153793167|gb|EAT99644.2| putative DNA methylase [Campylobacter curvus 525.92]
Length = 1787
Score = 38.1 bits (87), Expect = 10.0, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 17/121 (14%)
Query: 381 SNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEVGSCEDVGNESVAGSSEGNNGSVEG 440
+N+E D ++ +I G V NS++ TSV S+V + N + +SE N G
Sbjct: 879 TNIEAAEGDDQI---DINAGVKVENSTINTSVGSDVTNI----NGATITNSEINLG---- 927
Query: 441 SNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELELNAG-LGSVLQSTSGIDSET 499
N + Q D + +S S L N ++ G A D +E+ LNAG + L +G ++T
Sbjct: 928 --NNTADQRDVVNVNSGSTLTNTNIKGTQALGD---DEINLNAGSVSKDLMVDTGAGNDT 982
Query: 500 V 500
V
Sbjct: 983 V 983
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,287,378,643
Number of Sequences: 23463169
Number of extensions: 352134969
Number of successful extensions: 947627
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 316
Number of HSP's that attempted gapping in prelim test: 944844
Number of HSP's gapped (non-prelim): 2071
length of query: 514
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 367
effective length of database: 8,910,109,524
effective search space: 3270010195308
effective search space used: 3270010195308
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 79 (35.0 bits)