BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010266
(514 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 271 bits (693), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 155/403 (38%), Positives = 222/403 (55%), Gaps = 60/403 (14%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
NI L R E +++ ++ +D+D++ +IGRGAFGEV+L + K S +YAMK L K
Sbjct: 52 NIDNFLNRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKF 111
Query: 143 EMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXX 202
EM+ R ER+++A S +V+L+ +FQD +YLY++MEY+PGGD+
Sbjct: 112 EMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDV 171
Query: 203 XXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLS 262
A+FY A+ VLA+++IH IHRD+KPDN+LLD++GH+KL+DFG C +D T +
Sbjct: 172 PEKW-AKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV 230
Query: 263 AIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYI 322
+ VGTPDYI
Sbjct: 231 HCD------------------------------------------------TAVGTPDYI 242
Query: 323 APEVLLKKG----YGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPE 378
+PEVL +G YG ECDWWS+G ++EMLVG PFY+D V T KI+ KN L FPE
Sbjct: 243 SPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPE 302
Query: 379 EARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKD--IAWDKLYEMEAAYKPEVNG 436
+A ++ AK+LIC L D E RLG G E+IK HP+FK+ WD + E A PE++
Sbjct: 303 DAEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWNWDNIRETAAPVVPELSS 362
Query: 437 VLDTQNFMKFDEVESQTPKRTGSGPMRKMMLTPKDLSFVGYTY 479
+D+ N FD++E + P+ K + + L F+G+TY
Sbjct: 363 DIDSSN---FDDIEDDKGD-VETFPIPKAFVGNQ-LPFIGFTY 400
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 159/418 (38%), Positives = 223/418 (53%), Gaps = 64/418 (15%)
Query: 74 SDVPEEEQINILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNI 133
++ P + NIL+ LE + ++K+ ++ +DF++L +IGRGAFGEV + + K + +
Sbjct: 42 NNSPLRREKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKV 101
Query: 134 YAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDV 193
+AMK L K EML R + R ER++L S I L+Y+FQD LYL+M+Y GGD+
Sbjct: 102 FAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDL 161
Query: 194 XXXXXXXXXXX-XXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGL 252
+ARFY+A+ V+AI+S+H+ +Y+HRDIKPDN+L+D NGH++L+DFG
Sbjct: 162 LTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGS 221
Query: 253 CKPL--DCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRK 310
C L D T S++
Sbjct: 222 CLKLMEDGTVQSSV---------------------------------------------- 235
Query: 311 LAYSTVGTPDYIAPEVLL-----KKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCR 365
VGTPDYI+PE+L K YG ECDWWSLG MYEML G PFY++ V T
Sbjct: 236 ----AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG 291
Query: 366 KIVHWKNHLKFPEEAR-LTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLY 424
KI++ K +FP + ++ AKDLI RL+C EHRLG G E K HP+F I WD +
Sbjct: 292 KIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDNIR 351
Query: 425 EMEAAYKPEVNGVLDTQNFMKFDEVESQTPKRTGS-GPMRKMMLTPKDLSFVGYTYKN 481
EA Y PEV+ DT NF +V+ K + + P + L FVG+TY +
Sbjct: 352 NCEAPYIPEVSSPTDTSNF----DVDDDCLKNSETMPPPTHTAFSGHHLPFVGFTYTS 405
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/403 (36%), Positives = 221/403 (54%), Gaps = 60/403 (14%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
NI L R + +++ ++ +D++++ +IGRGAFGEV+L + K + +YAMK L K
Sbjct: 46 NIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKF 105
Query: 143 EMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXX 202
EM+ R ER+++A S +V+L+Y+FQD YLY++MEY+PGGD+
Sbjct: 106 EMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV 165
Query: 203 XXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLS 262
ARFY A+ VLA+++IH +IHRD+KPDN+LLD++GH+KL+DFG C ++ +
Sbjct: 166 PEKW-ARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 224
Query: 263 AIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYI 322
C +P DYI
Sbjct: 225 R--------------------------CDTAVGTP----------------------DYI 236
Query: 323 APEVLLKKG----YGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPE 378
+PEVL +G YG ECDWWS+G +YEMLVG PFY+D V T KI++ KN L FP+
Sbjct: 237 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD 296
Query: 379 EARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKD--IAWDKLYEMEAAYKPEVNG 436
+ ++ EAK+LIC L D E RLG G E+IK H +FK+ AW+ L + A P+++
Sbjct: 297 DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSS 356
Query: 437 VLDTQNFMKFDEVESQTPKRTGSGPMRKMMLTPKDLSFVGYTY 479
+DT NF +E + + + P+ K + + L FVG+TY
Sbjct: 357 DIDTSNFDDLEEDKGEEE----TFPIPKAFVGNQ-LPFVGFTY 394
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/403 (36%), Positives = 221/403 (54%), Gaps = 60/403 (14%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
NI L R + +++ ++ +D++++ +IGRGAFGEV+L + K + +YAMK L K
Sbjct: 51 NIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKF 110
Query: 143 EMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXX 202
EM+ R ER+++A S +V+L+Y+FQD YLY++MEY+PGGD+
Sbjct: 111 EMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV 170
Query: 203 XXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLS 262
ARFY A+ VLA+++IH +IHRD+KPDN+LLD++GH+KL+DFG C ++ +
Sbjct: 171 PEKW-ARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 229
Query: 263 AIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYI 322
C +P DYI
Sbjct: 230 R--------------------------CDTAVGTP----------------------DYI 241
Query: 323 APEVLLKKG----YGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPE 378
+PEVL +G YG ECDWWS+G +YEMLVG PFY+D V T KI++ KN L FP+
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD 301
Query: 379 EARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKD--IAWDKLYEMEAAYKPEVNG 436
+ ++ EAK+LIC L D E RLG G E+IK H +FK+ AW+ L + A P+++
Sbjct: 302 DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSS 361
Query: 437 VLDTQNFMKFDEVESQTPKRTGSGPMRKMMLTPKDLSFVGYTY 479
+DT NF +E + + + P+ K + + L FVG+TY
Sbjct: 362 DIDTSNFDDLEEDKGEEE----TFPIPKAFVGNQ-LPFVGFTY 399
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/403 (36%), Positives = 221/403 (54%), Gaps = 60/403 (14%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
NI L R + +++ ++ +D++++ +IGRGAFGEV+L + K + +YAMK L K
Sbjct: 51 NIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKF 110
Query: 143 EMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXX 202
EM+ R ER+++A S +V+L+Y+FQD YLY++MEY+PGGD+
Sbjct: 111 EMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV 170
Query: 203 XXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLS 262
ARFY A+ VLA+++IH +IHRD+KPDN+LLD++GH+KL+DFG C ++ +
Sbjct: 171 PEKW-ARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 229
Query: 263 AIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYI 322
C +P DYI
Sbjct: 230 R--------------------------CDTAVGTP----------------------DYI 241
Query: 323 APEVLLKKG----YGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPE 378
+PEVL +G YG ECDWWS+G +YEMLVG PFY+D V T KI++ KN L FP+
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD 301
Query: 379 EARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKD--IAWDKLYEMEAAYKPEVNG 436
+ ++ EAK+LIC L D E RLG G E+IK H +FK+ AW+ L + A P+++
Sbjct: 302 DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSS 361
Query: 437 VLDTQNFMKFDEVESQTPKRTGSGPMRKMMLTPKDLSFVGYTY 479
+DT NF +E + + + P+ K + + L FVG+TY
Sbjct: 362 DIDTSNFDDLEEDKGEEE----TFPIPKAFVGNQ-LPFVGFTY 399
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/392 (38%), Positives = 210/392 (53%), Gaps = 64/392 (16%)
Query: 98 LKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAER 157
+K ++ +DF+++ +IGRGAFGEV + + K + IYAMK L K EML R + R ER
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER 141
Query: 158 NLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXX-XXVARFYIAQSV 216
++L I L+Y+FQD +LYL+M+Y GGD+ +ARFYI + V
Sbjct: 142 DVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMV 201
Query: 217 LAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXX 276
LAI+SIH+ +Y+HRDIKPDN+LLD NGH++L+DFG C
Sbjct: 202 LAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSC----------------------- 238
Query: 277 XSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVL--LKKG--- 331
M+ DG S VGTPDYI+PE+L ++ G
Sbjct: 239 LKMNDDGTVQSS-------------------------VAVGTPDYISPEILQAMEDGMGK 273
Query: 332 YGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEAR-LTPEAKDLI 390
YG ECDWWSLG MYEML G PFY++ V T KI++ + +FP ++ EAKDLI
Sbjct: 274 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLI 333
Query: 391 CRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVE 450
RL+C E RLG G E K H +F+ + W+ + +EA Y P+V+ DT NF D+V
Sbjct: 334 QRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSPSDTSNFDVDDDVL 393
Query: 451 SQT---PKRTGSGPMRKMMLTPKDLSFVGYTY 479
T P + +G + L F+G+T+
Sbjct: 394 RNTEILPPGSHTG------FSGLHLPFIGFTF 419
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 253 bits (647), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/392 (38%), Positives = 210/392 (53%), Gaps = 64/392 (16%)
Query: 98 LKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAER 157
+K ++ +DF+++ +IGRGAFGEV + + K + IYAMK L K EML R + R ER
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER 125
Query: 158 NLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXX-XXVARFYIAQSV 216
++L I L+Y+FQD +LYL+M+Y GGD+ +ARFYI + V
Sbjct: 126 DVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMV 185
Query: 217 LAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXX 276
LAI+SIH+ +Y+HRDIKPDN+LLD NGH++L+DFG C
Sbjct: 186 LAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSC----------------------- 222
Query: 277 XSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVL--LKKG--- 331
M+ DG S VGTPDYI+PE+L ++ G
Sbjct: 223 LKMNDDGTVQSS-------------------------VAVGTPDYISPEILQAMEDGMGK 257
Query: 332 YGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEAR-LTPEAKDLI 390
YG ECDWWSLG MYEML G PFY++ V T KI++ + +FP ++ EAKDLI
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLI 317
Query: 391 CRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVE 450
RL+C E RLG G E K H +F+ + W+ + +EA Y P+V+ DT NF D+V
Sbjct: 318 QRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSPSDTSNFDVDDDVL 377
Query: 451 SQT---PKRTGSGPMRKMMLTPKDLSFVGYTY 479
T P + +G + L F+G+T+
Sbjct: 378 RNTEILPPGSHTG------FSGLHLPFIGFTF 403
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/428 (36%), Positives = 222/428 (51%), Gaps = 67/428 (15%)
Query: 67 LERKLASSDVPEEEQINILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQ 126
+ ++L +S++ +++ + L+ E +RLK ++ DDF++L +IGRGAF EV + +
Sbjct: 24 VHQELGASELAQDKYVADF--LQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVK 81
Query: 127 EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIME 186
K++G +YAMK + K +ML RG+V R ER++L I +L+++FQD YLYL+ME
Sbjct: 82 MKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVME 141
Query: 187 YLPGGDVXXXXXXXXXXX-XXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHM 245
Y GGD+ +ARFY+A+ V+AI+S+H+ Y+HRDIKPDN+LLD+ GH+
Sbjct: 142 YYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHI 201
Query: 246 KLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQ 305
+L+DFG C + DG
Sbjct: 202 RLADFGSC-----------------------LKLRADG---------------------- 216
Query: 306 INRRKLAYSTVGTPDYIAPEVL-------LKKGYGMECDWWSLGAIMYEMLVGYPPFYSD 358
R L VGTPDY++PE+L YG ECDWW+LG YEM G PFY+D
Sbjct: 217 -TVRSLV--AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD 273
Query: 359 DPVTTCRKIVHWKNHLKFPEEARLTP-EAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKD 417
T KIVH+K HL P P EA+D I RLLC E RLG G+ + HP+F
Sbjct: 274 STAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFFFG 333
Query: 418 IAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVESQ-TPKRTGSG----PMRKMMLTPKDL 472
+ WD L + + P+ G DT N FD VE T +G G +R+ L
Sbjct: 334 LDWDGLRDSVPPFTPDFEGATDTCN---FDLVEDGLTAMVSGGGETLSDIREGAPLGVHL 390
Query: 473 SFVGYTYK 480
FVGY+Y
Sbjct: 391 PFVGYSYS 398
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 221 bits (564), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 126/351 (35%), Positives = 181/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + IG G+FG V L + ++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+PGGD+ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G++K++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 221 bits (564), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 126/351 (35%), Positives = 181/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + IG G+FG V L + ++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+PGGD+ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G++K++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/351 (35%), Positives = 181/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D FD + +G G+FG V L + K+SGN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+ GG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLAGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/351 (35%), Positives = 181/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D FD + +G G+FG V L + K+SGN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+ GG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLXGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/351 (35%), Positives = 182/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D FD + +G G+FG V L + K+SGN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+ GG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D+P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADEPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 182/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + K++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+PGG++ ARFY AQ VL E +H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 193
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 194 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 229 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 285 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 335
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 182/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + K++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+PGG++ ARFY AQ VL E +H
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 213
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 214 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 248
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 249 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 304
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 305 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 355
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/351 (35%), Positives = 181/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D FD + +G G+FG V L + K+SGN YAMK L K +++ Q+EH E+ +L V
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+ GG++ ARFY AQ VL E +H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 193
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 194 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 229 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 285 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 335
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 182/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + K++GN +AMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL YSF+D LY++MEY+PGG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 182/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + K++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+PGG++ ARFY AQ VL E +H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 193
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 194 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 229 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 285 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 335
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/351 (35%), Positives = 181/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D FD + +G G+FG V L + K+SGN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+ GG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 182/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + K++GN +AMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL YSF+D LY++MEY+PGG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/351 (35%), Positives = 181/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D FD + +G G+FG V L + K+SGN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+ GG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/351 (35%), Positives = 181/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D FD + +G G+FG V L + K+SGN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+ GG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 182/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + K++GN +AMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL YSF+D LY++MEY+PGG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 181/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + K++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY PGG++ ARFY AQ VL E +H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NL++DQ G++K++DFG K +
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--------------------------- 193
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 194 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 229 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 285 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 335
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 125/351 (35%), Positives = 181/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + IG G+FG V L + ++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+PGG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G++K++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 182/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + K++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+PGG++ ARFY AQ VL E +H
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 152
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 185
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 186 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 220
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 221 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 276
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 277 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 327
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 126/351 (35%), Positives = 182/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D FD + +G G+FG V L + K+SGN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+ GG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 126/351 (35%), Positives = 182/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D FD + +G G+FG V L + K+SGN YAMK L K +++ Q+EH E+ +L V
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+ GG++ ARFY AQ VL E +H
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 180
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 213
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 214 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 248
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 249 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 304
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 305 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 355
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 125/351 (35%), Positives = 183/351 (52%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + K++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+PGG++ ARFY AQ VL E +H
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 152
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 185
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 186 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 220
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 221 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 276
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 277 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 327
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 126/351 (35%), Positives = 182/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D FD + +G G+FG V L + K+SGN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+ GG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 126/351 (35%), Positives = 182/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D FD + +G G+FG V L + K+SGN YAMK L K +++ Q+EH E+ +L V
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 94
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+ GG++ ARFY AQ VL E +H
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 154
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 155 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 187
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 188 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 222
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 223 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 278
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 279 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 329
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 126/351 (35%), Positives = 182/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D FD + +G G+FG V L + K+SGN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+ GG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 181/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D FD + +G G+FG V L + K+SGN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+ GG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+Y+M GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYQMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 182/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + ++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+PGG++ ARFY AQ VL E +H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 193
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W + GTP+Y+APE++L KGY DWW+LG +
Sbjct: 194 ------GRTW-------------------TLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 229 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 285 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 335
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 218 bits (554), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 181/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + K++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+PGG++ ARFY AQ VL E +H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 193
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 194 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 229 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G I H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 285 LKNGVNDIXNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 335
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 218 bits (554), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 181/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D FD + +G G+FG V L + K+SGN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+ GG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NL++DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE+++ KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIIISKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 218 bits (554), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 181/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D FD + +G G+FG V L + K+SGN YAMK L K +++ Q+EH E+ +L V
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+ GG++ ARFY AQ VL E +H
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 213
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
G W + GTP+Y+APE++L KGY DWW+LG +
Sbjct: 214 ------GATW-------------------TLCGTPEYLAPEIILSKGYNKAVDWWALGVL 248
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 249 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 304
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 305 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 355
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 218 bits (554), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 182/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + ++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+PGG++ ARFY AQ VL E +H
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 145
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 146 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 178
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W + GTP+Y+APE++L KGY DWW+LG +
Sbjct: 179 ------GRTW-------------------TLCGTPEYLAPEIILSKGYNKAVDWWALGVL 213
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 214 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 269
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 270 LKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 320
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 180/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D FD + +G G+FG V L + K+SGN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+ GG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+AP ++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPAIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 181/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + ++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+PGG++ ARFY AQ VL E +H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 193
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 194 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 229 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 285 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 335
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 181/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D FD + +G G+FG V L + K+SGN YAMK L K +++ Q+EH E+ +L V
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 86
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+ GG++ ARFY AQ VL E +H
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 146
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+D+ G+++++DFG K +
Sbjct: 147 LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK--------------------------- 179
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 180 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 214
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 215 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 270
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 271 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 321
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 181/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + ++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+PGG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 181/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + ++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+PGG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 181/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + ++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+PGG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 180/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D FD + +G G+FG V L + K+SGN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+ GG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKAFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 182/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + ++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+PGG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 182/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + ++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+PGG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 180/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + ++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY PGG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NL++DQ G++K++DFG K +
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 182/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + ++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+PGG++ ARFY AQ VL E +H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 193
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 194 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 229 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 285 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 335
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 181/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + ++GN YAMK L K +++ ++EH E+ +L V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY PGG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NL++DQ G++K++DFGL K +
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 181/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + ++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY PGG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NL++DQ G++K++DFG K +
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 180/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D FD + +G G+FG V L + K+SGN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+ GG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+ +APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEALAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 180/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + K++GN YAMK L K +++ Q+EH E+ + V
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN 100
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY+++EY PGG++ ARFY AQ VL E +H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G++K++DFG K +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--------------------------- 193
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 194 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 229 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 285 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 335
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 180/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D FD + +G G+FG V L + K+SGN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+ GG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT N ++E E
Sbjct: 284 LPNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNADDYEEEE 334
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 179/351 (50%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + ++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+ KL +SF+D LY++MEY PGG++ ARFY AQ VL E +H
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NL++DQ G++K++DFG K +
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--------------------------- 193
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 194 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 229 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 285 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 335
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 180/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + ++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY PGG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NL++DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 179/351 (50%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + ++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+ KL +SF+D LY++MEY PGG++ ARFY AQ VL E +H
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NL++DQ G++K++DFG K +
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--------------------------- 193
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 194 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 229 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 285 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 335
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 181/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + ++GN YAMK L K +++ ++EH E+ +L V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY PGG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NL++DQ G+++++DFGL K +
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 180/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + ++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+ KL +SF+D LY++MEY PGG++ ARFY AQ VL E +H
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NL++DQ G++K++DFG K +
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--------------------------- 193
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 194 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 229 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 285 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 335
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 180/351 (51%), Gaps = 61/351 (17%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D F+ + +G G+FG V L + ++GN YAMK L K +++ Q+EH E+ +L V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VKL +SF+D LY++MEY+ GG++ ARFY AQ VL E +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ I+RD+KP+NLL+DQ G+++++DFG K +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------------- 192
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
GR W GTP+Y+APE++L KGY DWW+LG +
Sbjct: 193 ------GRTW-------------------XLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGT 403
+YEM GYPPF++D P+ KIV K ++FP + + + KDL+ LL D+ R G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 404 L--GSEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVE 450
L G IK H WF W +Y+ +EA + P+ G DT NF ++E E
Sbjct: 284 LKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/353 (33%), Positives = 178/353 (50%), Gaps = 62/353 (17%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
K S+ DF +L +G G+FG V L + + +G YAMK LKK ++ QVEH ER +L+
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
V I++++ +FQDA+ +++IM+Y+ GG++ VA+FY A+ LA+E
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEY 121
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
+H + I+RD+KP+N+L +D
Sbjct: 122 LHSKDIIYRDLKPENIL----------------------------------------LDK 141
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 341
+G + G P + Y GTPDYIAPEV+ K Y DWWS
Sbjct: 142 NGHIKITDFGFAKYVP------------DVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSF 189
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHR 400
G ++YEML GY PFY + + T KI++ L+FP + KDL+ RL+ D+ R
Sbjct: 190 GILIYEMLAGYTPFYDSNTMKTYEKILN--AELRFP--PFFNEDVKDLLSRLITRDLSQR 245
Query: 401 LGTL--GSEQIKAHPWFKDIAWDKLY--EMEAAYKPEV-NGVLDTQNFMKFDE 448
LG L G+E +K HPWFK++ W+KL +E Y+P + G DT F K+ E
Sbjct: 246 LGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDKYPE 298
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 186/363 (51%), Gaps = 66/363 (18%)
Query: 102 KISVDDFDLLTIIGRGAFG---EVRLCQEKKSGNIYAMKKLKKSEMLSRGQ-VEHVRAER 157
KI + F+LL ++G+G +G +VR +G I+AMK LKK+ ++ + H +AER
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 158 NLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL 217
N+L EV IV L Y+FQ LYLI+EYL GG++ A FY+A+ +
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM 132
Query: 218 AIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXX 277
A+ +H+ I+RD+KP+N++L+ GH+KL+DFGLCK
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE---------------------- 170
Query: 278 SMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECD 337
I+ + ++ GT +Y+APE+L++ G+ D
Sbjct: 171 ---------------------------SIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVD 203
Query: 338 WWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-D 396
WWSLGA+MY+ML G PPF ++ T KI+ K L P LT EA+DL+ +LL +
Sbjct: 204 WWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK--LNLP--PYLTQEARDLLKKLLKRN 259
Query: 397 VEHRLGTLGSE--QIKAHPWFKDIAWDKLY--EMEAAYKPEVNGVLDTQNF-MKFDEVES 451
RLG + +++AHP+F+ I W++L ++E +KP + D F KF
Sbjct: 260 AASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTR--- 316
Query: 452 QTP 454
QTP
Sbjct: 317 QTP 319
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 185/363 (50%), Gaps = 66/363 (18%)
Query: 102 KISVDDFDLLTIIGRGAFG---EVRLCQEKKSGNIYAMKKLKKSEMLSRGQ-VEHVRAER 157
KI + F+LL ++G+G +G +VR +G I+AMK LKK+ ++ + H +AER
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 158 NLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL 217
N+L EV IV L Y+FQ LYLI+EYL GG++ A FY+A+ +
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM 132
Query: 218 AIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXX 277
A+ +H+ I+RD+KP+N++L+ GH+KL+DFGLCK
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE---------------------- 170
Query: 278 SMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECD 337
I+ + + GT +Y+APE+L++ G+ D
Sbjct: 171 ---------------------------SIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVD 203
Query: 338 WWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-D 396
WWSLGA+MY+ML G PPF ++ T KI+ K L P LT EA+DL+ +LL +
Sbjct: 204 WWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK--LNLP--PYLTQEARDLLKKLLKRN 259
Query: 397 VEHRLGTLGSE--QIKAHPWFKDIAWDKLY--EMEAAYKPEVNGVLDTQNF-MKFDEVES 451
RLG + +++AHP+F+ I W++L ++E +KP + D F KF
Sbjct: 260 AASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTR--- 316
Query: 452 QTP 454
QTP
Sbjct: 317 QTP 319
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/373 (34%), Positives = 189/373 (50%), Gaps = 68/373 (18%)
Query: 93 TEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGN----IYAMKKLKKSEMLSRG 148
T +++ K F+LL ++G+G+FG+V L + K SG+ +YAMK LKK+ + R
Sbjct: 11 THHVKEGHEKADPSQFELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRD 69
Query: 149 QVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA 208
+V + ER++L EV IVKL+Y+FQ LYLI+++L GGD+
Sbjct: 70 RVR-TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV 128
Query: 209 RFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXX 268
+FY+A+ LA++ +H I+RD+KP+N+LLD+ GH+KL+DFGL K
Sbjct: 129 KFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE------------- 175
Query: 269 XXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL 328
I+ K AYS GT +Y+APEV+
Sbjct: 176 ------------------------------------SIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 329 KKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKD 388
++G+ DWWS G +M+EML G PF D T I+ K L P+ L+PEA+
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL--KAKLGMPQ--FLSPEAQS 255
Query: 389 LICRLLC-DVEHRLGTL--GSEQIKAHPWFKDIAWDKLY--EMEAAYKPEVNGVLDTQNF 443
L+ L + +RLG G E+IK H +F I W+KLY E+ +KP DT
Sbjct: 256 LLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKPATGRPEDT--- 312
Query: 444 MKFD-EVESQTPK 455
FD E ++TPK
Sbjct: 313 FYFDPEFTAKTPK 325
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 182/359 (50%), Gaps = 60/359 (16%)
Query: 100 RHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL 159
R K++++DFD L ++G+G FG+V L +EK +G YAMK L+K ++++ +V H E +
Sbjct: 2 RAKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 61
Query: 160 LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
L + L Y+FQ + L +MEY GG++ ARFY A+ V A+
Sbjct: 62 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 121
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
E +H + ++RDIK +NL+LD++GH+K++DFGLCK +S
Sbjct: 122 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGIS----------------- 160
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWW 339
DG ++ C GTP+Y+APEVL YG DWW
Sbjct: 161 --DGATMKTFC--------------------------GTPEYLAPEVLEDNDYGRAVDWW 192
Query: 340 SLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVE 398
LG +MYEM+ G PFY+ D I+ ++FP L+PEAK L+ LL D +
Sbjct: 193 GLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRT--LSPEAKSLLAGLLKKDPK 248
Query: 399 HRLGTLGSE--QIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVESQT 453
RLG S+ ++ H +F I W + + + +KP+V +DT+ F DE +Q+
Sbjct: 249 QRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD--DEFTAQS 305
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 184 bits (468), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 119/351 (33%), Positives = 178/351 (50%), Gaps = 61/351 (17%)
Query: 100 RHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL 159
+H++++++F+ L ++G+G FG+V L +EK +G YAMK LKK ++++ +V H E +
Sbjct: 142 KHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 201
Query: 160 LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
L + L YSFQ + L +MEY GG++ ARFY A+ V A+
Sbjct: 202 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSAL 261
Query: 220 ESIH-KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+ +H + N ++RD+K +NL+LD++GH+K++DFGLCK I
Sbjct: 262 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-------EGIK------------- 301
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
DG ++ C GTP+Y+APEVL YG DW
Sbjct: 302 ---DGATMKTFC--------------------------GTPEYLAPEVLEDNDYGRAVDW 332
Query: 339 WSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDV 397
W LG +MYEM+ G PFY+ D I+ ++FP L PEAK L+ LL D
Sbjct: 333 WGLGVVMYEMMCGRLPFYNQDHEKLFELILM--EEIRFPRT--LGPEAKSLLSGLLKKDP 388
Query: 398 EHRLGTLGSE---QIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNF 443
+ RLG GSE +I H +F I W +YE + +KP+V DT+ F
Sbjct: 389 KQRLGG-GSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYF 438
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/351 (33%), Positives = 178/351 (50%), Gaps = 61/351 (17%)
Query: 100 RHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL 159
+H++++++F+ L ++G+G FG+V L +EK +G YAMK LKK ++++ +V H E +
Sbjct: 145 KHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 204
Query: 160 LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
L + L YSFQ + L +MEY GG++ ARFY A+ V A+
Sbjct: 205 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSAL 264
Query: 220 ESIH-KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+ +H + N ++RD+K +NL+LD++GH+K++DFGLCK I
Sbjct: 265 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-------EGIK------------- 304
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
DG ++ C GTP+Y+APEVL YG DW
Sbjct: 305 ---DGATMKTFC--------------------------GTPEYLAPEVLEDNDYGRAVDW 335
Query: 339 WSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDV 397
W LG +MYEM+ G PFY+ D I+ ++FP L PEAK L+ LL D
Sbjct: 336 WGLGVVMYEMMCGRLPFYNQDHEKLFELILM--EEIRFPR--TLGPEAKSLLSGLLKKDP 391
Query: 398 EHRLGTLGSE---QIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNF 443
+ RLG GSE +I H +F I W +YE + +KP+V DT+ F
Sbjct: 392 KQRLGG-GSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYF 441
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 181/357 (50%), Gaps = 60/357 (16%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
K++++DFD L ++G+G FG+V L +EK +G YAMK L+K ++++ +V H E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
+ L Y+FQ + L +MEY GG++ ARFY A+ V A+E
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
+H + ++RDIK +NL+LD++GH+K++DFGLCK +S
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGIS------------------- 157
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 341
DG ++ C GTP+Y+APEVL YG DWW L
Sbjct: 158 DGATMKTFC--------------------------GTPEYLAPEVLEDNDYGRAVDWWGL 191
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHR 400
G +MYEM+ G PFY+ D I+ ++FP L+PEAK L+ LL D + R
Sbjct: 192 GVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRT--LSPEAKSLLAGLLKKDPKQR 247
Query: 401 LGTLGSE--QIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVESQT 453
LG S+ ++ H +F I W + + + +KP+V +DT+ F DE +Q+
Sbjct: 248 LGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD--DEFTAQS 302
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 181/357 (50%), Gaps = 60/357 (16%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
K++++DFD L ++G+G FG+V L +EK +G YAMK L+K ++++ +V H E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
+ L Y+FQ + L +MEY GG++ ARFY A+ V A+E
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
+H + ++RDIK +NL+LD++GH+K++DFGLCK +S
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGIS------------------- 157
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 341
DG ++ C GTP+Y+APEVL YG DWW L
Sbjct: 158 DGATMKTFC--------------------------GTPEYLAPEVLEDNDYGRAVDWWGL 191
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHR 400
G +MYEM+ G PFY+ D I+ ++FP L+PEAK L+ LL D + R
Sbjct: 192 GVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRT--LSPEAKSLLAGLLKKDPKQR 247
Query: 401 LGTLGSE--QIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVESQT 453
LG S+ ++ H +F I W + + + +KP+V +DT+ F DE +Q+
Sbjct: 248 LGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD--DEFTAQS 302
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/349 (34%), Positives = 179/349 (51%), Gaps = 64/349 (18%)
Query: 93 TEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGN----IYAMKKLKKSEMLSRG 148
T +++ K F+LL ++G+G+FG+V L + K SG+ +YAMK LKK+ + R
Sbjct: 12 THHVKEGHEKADPSQFELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRD 70
Query: 149 QVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA 208
+V + ER++L EV IVKL+Y+FQ LYLI+++L GGD+
Sbjct: 71 RVR-TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV 129
Query: 209 RFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXX 268
+FY+A+ LA++ +H I+RD+KP+N+LLD+ GH+KL+DFGL K
Sbjct: 130 KFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE------------- 176
Query: 269 XXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL 328
I+ K AYS GT +Y+APEV+
Sbjct: 177 ------------------------------------SIDHEKKAYSFCGTVEYMAPEVVN 200
Query: 329 KKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKD 388
++G+ DWWS G +M+EML G PF D T I+ K L P+ L+PEA+
Sbjct: 201 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL--KAKLGMPQ--FLSPEAQS 256
Query: 389 LICRLLC-DVEHRLGTL--GSEQIKAHPWFKDIAWDKLY--EMEAAYKP 432
L+ L + +RLG G E+IK H +F I W+KLY E+ +KP
Sbjct: 257 LLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP 305
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/349 (34%), Positives = 179/349 (51%), Gaps = 64/349 (18%)
Query: 93 TEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGN----IYAMKKLKKSEMLSRG 148
T +++ K F+LL ++G+G+FG+V L + K SG+ +YAMK LKK+ + R
Sbjct: 11 THHVKEGHEKADPSQFELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRD 69
Query: 149 QVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA 208
+V + ER++L EV IVKL+Y+FQ LYLI+++L GGD+
Sbjct: 70 RVR-TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV 128
Query: 209 RFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXX 268
+FY+A+ LA++ +H I+RD+KP+N+LLD+ GH+KL+DFGL K
Sbjct: 129 KFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE------------- 175
Query: 269 XXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL 328
I+ K AYS GT +Y+APEV+
Sbjct: 176 ------------------------------------SIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 329 KKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKD 388
++G+ DWWS G +M+EML G PF D T I+ K L P+ L+PEA+
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL--KAKLGMPQ--FLSPEAQS 255
Query: 389 LICRLLC-DVEHRLGTL--GSEQIKAHPWFKDIAWDKLY--EMEAAYKP 432
L+ L + +RLG G E+IK H +F I W+KLY E+ +KP
Sbjct: 256 LLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP 304
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 180/357 (50%), Gaps = 60/357 (16%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
K++++DFD L ++G+G FG+V L +EK +G YAMK L+K ++++ +V H E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
+ L Y+FQ + L +MEY GG++ ARFY A+ V A+E
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
+H + ++RDIK +NL+LD++GH+K++DFGLCK +S
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGIS------------------- 157
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 341
DG + C GTP+Y+APEVL YG DWW L
Sbjct: 158 DGATMKXFC--------------------------GTPEYLAPEVLEDNDYGRAVDWWGL 191
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHR 400
G +MYEM+ G PFY+ D I+ ++FP L+PEAK L+ LL D + R
Sbjct: 192 GVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRT--LSPEAKSLLAGLLKKDPKQR 247
Query: 401 LGTLGSE--QIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVESQT 453
LG S+ ++ H +F I W + + + +KP+V +DT+ F DE +Q+
Sbjct: 248 LGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD--DEFTAQS 302
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 180/357 (50%), Gaps = 60/357 (16%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
K++++DFD L ++G+G FG+V L +EK +G YAMK L+K ++++ +V H E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
+ L Y+FQ + L +MEY GG++ ARFY A+ V A+E
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
+H + ++RDIK +NL+LD++GH+K++DFGLCK +S
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGIS------------------- 157
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 341
DG + C GTP+Y+APEVL YG DWW L
Sbjct: 158 DGATMKXFC--------------------------GTPEYLAPEVLEDNDYGRAVDWWGL 191
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHR 400
G +MYEM+ G PFY+ D I+ ++FP L+PEAK L+ LL D + R
Sbjct: 192 GVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRT--LSPEAKSLLAGLLKKDPKQR 247
Query: 401 LGTLGSE--QIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVESQT 453
LG S+ ++ H +F I W + + + +KP+V +DT+ F DE +Q+
Sbjct: 248 LGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD--DEFTAQS 302
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 180/357 (50%), Gaps = 60/357 (16%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
K++++DFD L ++G+G FG+V L +EK +G YAMK L+K ++++ +V H E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
+ L Y+FQ + L +MEY GG++ ARFY A+ V A+E
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
+H + ++RDIK +NL+LD++GH+K++DFGLCK +S
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGIS------------------- 157
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 341
DG + C GTP+Y+APEVL YG DWW L
Sbjct: 158 DGATMKXFC--------------------------GTPEYLAPEVLEDNDYGRAVDWWGL 191
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHR 400
G +MYEM+ G PFY+ D I+ ++FP L+PEAK L+ LL D + R
Sbjct: 192 GVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRT--LSPEAKSLLAGLLKKDPKQR 247
Query: 401 LGTLGSE--QIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVESQT 453
LG S+ ++ H +F I W + + + +KP+V +DT+ F DE +Q+
Sbjct: 248 LGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD--DEFTAQS 302
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 180/357 (50%), Gaps = 60/357 (16%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
K++++DFD L ++G+G FG+V L +EK +G YAMK L+K ++++ +V H E +L
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
+ L Y+FQ + L +MEY GG++ ARFY A+ V A+E
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 125
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
+H + ++RDIK +NL+LD++GH+K++DFGLCK +S
Sbjct: 126 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGIS------------------- 162
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 341
DG + C GTP+Y+APEVL YG DWW L
Sbjct: 163 DGATMKXFC--------------------------GTPEYLAPEVLEDNDYGRAVDWWGL 196
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHR 400
G +MYEM+ G PFY+ D I+ ++FP L+PEAK L+ LL D + R
Sbjct: 197 GVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRT--LSPEAKSLLAGLLKKDPKQR 252
Query: 401 LGTLGSE--QIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNFMKFDEVESQT 453
LG S+ ++ H +F I W + + + +KP+V +DT+ F DE +Q+
Sbjct: 253 LGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD--DEFTAQS 307
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 185/359 (51%), Gaps = 62/359 (17%)
Query: 93 TEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQE---KKSGNIYAMKKLKKSEMLSRGQ 149
T +++ K F+LL ++G+G+FG+V L ++ SG++YAMK LKK+ + R +
Sbjct: 15 THHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDR 74
Query: 150 VEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR 209
V + ER++LA+V +VKL+Y+FQ LYLI+++L GGD+ +
Sbjct: 75 VR-TKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVK 133
Query: 210 FYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXX 269
FY+A+ L ++ +H I+RD+KP+N+LLD+ GH+KL+DFGL K
Sbjct: 134 FYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE-------------- 179
Query: 270 XXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK 329
I+ K AYS GT +Y+APEV+ +
Sbjct: 180 -----------------------------------AIDHEKKAYSFCGTVEYMAPEVVNR 204
Query: 330 KGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDL 389
+G+ DWWS G +M+EML G PF D T I+ K L P+ L+ EA+ L
Sbjct: 205 QGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLIL--KAKLGMPQ--FLSTEAQSL 260
Query: 390 ICRLLC-DVEHRLGTL--GSEQIKAHPWFKDIAWDKLY--EMEAAYKPEVNGVLDTQNF 443
+ L + +RLG+ G+E+IK H ++ I W+KLY E++ +KP V DT F
Sbjct: 261 LRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRREIKPPFKPAVAQPDDTFYF 319
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 120/381 (31%), Positives = 185/381 (48%), Gaps = 62/381 (16%)
Query: 107 DFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH 166
DF L +IG+G+FG+V L + K YA+K L+K +L + + +H+ +ERN+L + H
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 167 -CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
+V L++SFQ A+ LY +++Y+ GG++ ARFY A+ A+ +H
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL 158
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
N ++RD+KP+N+LLD GH+ L+DFGLCK
Sbjct: 159 NIVYRDLKPENILLDSQGHIVLTDFGLCK------------------------------- 187
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
E ++H + GTP+Y+APEVL K+ Y DWW LGA++
Sbjct: 188 -------------ENIEH-----NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVL 229
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHRLGTL 404
YEML G PPFYS + I++ LK +T A+ L+ LL D RLG
Sbjct: 230 YEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARHLLEGLLQKDRTKRLGAK 285
Query: 405 GS-EQIKAHPWFKDIAWDKLY--EMEAAYKPEVNGVLDTQNFMKFDEVESQTPKRTGSGP 461
+IK+H +F I WD L ++ + P V+G D ++F + E P G P
Sbjct: 286 DDFMEIKSHVFFSLINWDDLINKKITPPFNPNVSGPNDLRHFDP-EFTEEPVPNAIGKAP 344
Query: 462 ---MRKMMLTPKDLSFVGYTY 479
+ + +F+G++Y
Sbjct: 345 DSVLVTASVKEAAEAFLGFSY 365
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 181 bits (460), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 180/359 (50%), Gaps = 63/359 (17%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
K+ ++DF+L ++G+G+FG+V L + KK+ +A+K LKK +L VE E+ +L+
Sbjct: 14 KLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 73
Query: 162 EVASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIE 220
H + ++ +FQ E L+ +MEYL GGD+ A FY A+ +L ++
Sbjct: 74 LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 133
Query: 221 SIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMD 280
+H ++RD+K DN+LLD++GH+K++DFG+CK +M
Sbjct: 134 FLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK----------------------ENML 171
Query: 281 VDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 340
D + E CG TPDYIAPE+LL + Y DWWS
Sbjct: 172 GDAKTNEF-CG--------------------------TPDYIAPEILLGQKYNHSVDWWS 204
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEAR-LTPEAKDLICRLLC-DVE 398
G ++YEML+G PF+ D I + P R L EAKDL+ +L + E
Sbjct: 205 FGVLLYEMLIGQSPFHGQDEEELFHSI-----RMDNPFYPRWLEKEAKDLLVKLFVREPE 259
Query: 399 HRLGTLGSEQIKAHPWFKDIAWDKL--YEMEAAYKPEVNGVLDTQNFMKFDEVESQTPK 455
RLG G I+ HP F++I W++L E++ ++P+V D NF K E ++ P+
Sbjct: 260 KRLGVRGD--IRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDK--EFLNEKPR 314
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 178/359 (49%), Gaps = 63/359 (17%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
K+ ++DF L ++G+G+FG+V L + KK+ +A+K LKK +L VE E+ +L+
Sbjct: 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 72
Query: 162 EVASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIE 220
H + ++ +FQ E L+ +MEYL GGD+ A FY A+ +L ++
Sbjct: 73 LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 132
Query: 221 SIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMD 280
+H ++RD+K DN+LLD++GH+K++DFG+CK +M
Sbjct: 133 FLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK----------------------ENML 170
Query: 281 VDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 340
D + CG TPDYIAPE+LL + Y DWWS
Sbjct: 171 GDAK-TNXFCG--------------------------TPDYIAPEILLGQKYNHSVDWWS 203
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEAR-LTPEAKDLICRLLC-DVE 398
G ++YEML+G PF+ D I + P R L EAKDL+ +L + E
Sbjct: 204 FGVLLYEMLIGQSPFHGQDEEELFHSI-----RMDNPFYPRWLEKEAKDLLVKLFVREPE 258
Query: 399 HRLGTLGSEQIKAHPWFKDIAWDKL--YEMEAAYKPEVNGVLDTQNFMKFDEVESQTPK 455
RLG G I+ HP F++I W++L E++ ++P+V D NF K E ++ P+
Sbjct: 259 KRLGVRGD--IRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDK--EFLNEKPR 313
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/349 (33%), Positives = 175/349 (50%), Gaps = 61/349 (17%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
++++++F+ L ++G+G FG+V L +EK +G YAMK LKK ++++ +V H E +L
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
+ L YSFQ + L +MEY GG++ ARFY A+ V A++
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 123
Query: 222 IH-KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMD 280
+H + N ++RD+K +NL+LD++GH+K++DFGLCK I
Sbjct: 124 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-------EGIK--------------- 161
Query: 281 VDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 340
DG + CG TP+Y+APEVL YG DWW
Sbjct: 162 -DGATMKXFCG--------------------------TPEYLAPEVLEDNDYGRAVDWWG 194
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEH 399
LG +MYEM+ G PFY+ D I+ ++FP L PEAK L+ LL D +
Sbjct: 195 LGVVMYEMMCGRLPFYNQDHEKLFELIL--MEEIRFPR--TLGPEAKSLLSGLLKKDPKQ 250
Query: 400 RLGTLGSE---QIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNF 443
RLG GSE +I H +F I W +YE + +KP+V DT+ F
Sbjct: 251 RLGG-GSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYF 298
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/349 (33%), Positives = 175/349 (50%), Gaps = 61/349 (17%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
++++++F+ L ++G+G FG+V L +EK +G YAMK LKK ++++ +V H E +L
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 64
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
+ L YSFQ + L +MEY GG++ ARFY A+ V A++
Sbjct: 65 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 124
Query: 222 IH-KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMD 280
+H + N ++RD+K +NL+LD++GH+K++DFGLCK I
Sbjct: 125 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-------EGIK--------------- 162
Query: 281 VDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 340
DG + CG TP+Y+APEVL YG DWW
Sbjct: 163 -DGATMKXFCG--------------------------TPEYLAPEVLEDNDYGRAVDWWG 195
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEH 399
LG +MYEM+ G PFY+ D I+ ++FP L PEAK L+ LL D +
Sbjct: 196 LGVVMYEMMCGRLPFYNQDHEKLFELIL--MEEIRFPR--TLGPEAKSLLSGLLKKDPKQ 251
Query: 400 RLGTLGSE---QIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNF 443
RLG GSE +I H +F I W +YE + +KP+V DT+ F
Sbjct: 252 RLGG-GSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYF 299
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/349 (33%), Positives = 175/349 (50%), Gaps = 61/349 (17%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
++++++F+ L ++G+G FG+V L +EK +G YAMK LKK ++++ +V H E +L
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
+ L YSFQ + L +MEY GG++ ARFY A+ V A++
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 125
Query: 222 IH-KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMD 280
+H + N ++RD+K +NL+LD++GH+K++DFGLCK I
Sbjct: 126 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-------EGIK--------------- 163
Query: 281 VDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 340
DG + CG TP+Y+APEVL YG DWW
Sbjct: 164 -DGATMKXFCG--------------------------TPEYLAPEVLEDNDYGRAVDWWG 196
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEH 399
LG +MYEM+ G PFY+ D I+ ++FP L PEAK L+ LL D +
Sbjct: 197 LGVVMYEMMCGRLPFYNQDHEKLFELIL--MEEIRFPR--TLGPEAKSLLSGLLKKDPKQ 252
Query: 400 RLGTLGSE---QIKAHPWFKDIAWDKLYE--MEAAYKPEVNGVLDTQNF 443
RLG GSE +I H +F I W +YE + +KP+V DT+ F
Sbjct: 253 RLGG-GSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYF 300
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 182/358 (50%), Gaps = 68/358 (18%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQE---KKSGNIYAMKKLKKSEMLSRGQV-EHVRAER 157
K+ +++F+LL ++G GA+G+V L ++ +G +YAMK LKK+ ++ + + EH R ER
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 158 NLLAEV-ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSV 216
+L + S +V L+Y+FQ L+LI++Y+ GG++ + Y+ + V
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIV 169
Query: 217 LAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXX 276
LA+E +HK I+RDIK +N+LLD NGH+ L+DFGL K
Sbjct: 170 LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK---------------------- 207
Query: 277 XSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL--KKGYGM 334
+ + + AY GT +Y+AP+++ G+
Sbjct: 208 --------------------------EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDK 241
Query: 335 ECDWWSLGAIMYEMLVGYPPFYSD----DPVTTCRKIVHWKNHLKFPEEARLTPEAKDLI 390
DWWSLG +MYE+L G PF D R+I+ K+ +P+E ++ AKDLI
Sbjct: 242 AVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL--KSEPPYPQE--MSALAKDLI 297
Query: 391 CRLLC-DVEHRLGT--LGSEQIKAHPWFKDIAWDKLY--EMEAAYKPEVNGVLDTQNF 443
RLL D + RLG +++IK H +F+ I WD L ++ A +KP + LD NF
Sbjct: 298 QRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDELDVSNF 355
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 175/350 (50%), Gaps = 60/350 (17%)
Query: 101 HKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLL 160
+++ +D+F+ + ++G+G+FG+V L + K++G++YA+K LKK +L VE E+ +L
Sbjct: 18 NRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRIL 77
Query: 161 AEVASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
+ +H + +L+ FQ + L+ +ME++ GGD+ ARFY A+ + A+
Sbjct: 78 SLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISAL 137
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
+H I+RD+K DN+LLD GH KL+DFG+CK C ++
Sbjct: 138 MFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTA--------------- 182
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWW 339
+ GTPDYIAPE+L + YG DWW
Sbjct: 183 ----------------------------------TFCGTPDYIAPEILQEMLYGPAVDWW 208
Query: 340 SLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVE 398
++G ++YEML G+ PF +++ I++ + + +P L +A ++ + +
Sbjct: 209 AMGVLLYEMLCGHAPFEAENEDDLFEAILN--DEVVYP--TWLHEDATGILKSFMTKNPT 264
Query: 399 HRLGTL---GSEQIKAHPWFKDIAWDKLY--EMEAAYKPEVNGVLDTQNF 443
RLG+L G I HP+FK+I W +L ++E ++P + D NF
Sbjct: 265 MRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRIKSREDVSNF 314
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 187/398 (46%), Gaps = 79/398 (19%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE 162
+ + DFDLL +IGRG++ +V L + KK+ IYAMK +KK + ++ V+ E+++ +
Sbjct: 17 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 76
Query: 163 VASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
++H +V L+ FQ L+ ++EY+ GGD+ ARFY A+ LA+
Sbjct: 77 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 136
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK----PLDCTNLSAIXXXXXXXXXXXXX 277
+H+ I+RD+K DN+LLD GH+KL+D+G+CK P D T+
Sbjct: 137 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF--------------- 181
Query: 278 SMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECD 337
CG TP+YIAPE+L + YG D
Sbjct: 182 ------------CG--------------------------TPNYIAPEILRGEDYGFSVD 203
Query: 338 WWSLGAIMYEMLVGYPPF----YSDDPVTTCRKI---VHWKNHLKFPEEARLTPEAKDLI 390
WW+LG +M+EM+ G PF SD+P V + ++ P + A L
Sbjct: 204 WWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSMSVKA-ASVLK 262
Query: 391 CRLLCDVEHRLGTL---GSEQIKAHPWFKDIAWDKLYEMEAA--YKPEVNGVLDTQNFMK 445
L D + RLG L G I+ HP+F+++ WD + + + +KP ++G NF
Sbjct: 263 SFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNF-- 320
Query: 446 FDEVESQ-TPKRTGSGPMRKMMLTPKDLS-FVGYTYKN 481
+SQ T +R P ++ D S F G+ Y N
Sbjct: 321 ----DSQFTNERVQLXPDDDDIVRKIDQSEFEGFEYIN 354
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 173/359 (48%), Gaps = 73/359 (20%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE 162
+ + DFDLL +IGRG++ +V L + KK+ IYAM+ +KK + ++ V+ E+++ +
Sbjct: 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQ 108
Query: 163 VASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
++H +V L+ FQ L+ ++EY+ GGD+ ARFY A+ LA+
Sbjct: 109 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 168
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK----PLDCTNLSAIXXXXXXXXXXXXX 277
+H+ I+RD+K DN+LLD GH+KL+D+G+CK P D T+
Sbjct: 169 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS----------------- 211
Query: 278 SMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECD 337
+ GTP+YIAPE+L + YG D
Sbjct: 212 ------------------------------------TFCGTPNYIAPEILRGEDYGFSVD 235
Query: 338 WWSLGAIMYEMLVGYPPF----YSDDPVTTCRKI---VHWKNHLKFPEEARLTPEAKDLI 390
WW+LG +M+EM+ G PF SD+P V + ++ P L+ +A ++
Sbjct: 236 WWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS--LSVKAASVL 293
Query: 391 CRLLC-DVEHRLG---TLGSEQIKAHPWFKDIAWDKLYEMEAA--YKPEVNGVLDTQNF 443
L D + RLG G I+ HP+F+++ WD + + + +KP ++G NF
Sbjct: 294 KSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNF 352
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 173/359 (48%), Gaps = 73/359 (20%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE 162
+ + DFDLL +IGRG++ +V L + KK+ IYAMK +KK + ++ V+ E+++ +
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 163 VASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
++H +V L+ FQ L+ ++EY+ GGD+ ARFY A+ LA+
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 121
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK----PLDCTNLSAIXXXXXXXXXXXXX 277
+H+ I+RD+K DN+LLD GH+KL+D+G+CK P D T+
Sbjct: 122 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF--------------- 166
Query: 278 SMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECD 337
CG TP+YIAPE+L + YG D
Sbjct: 167 ------------CG--------------------------TPNYIAPEILRGEDYGFSVD 188
Query: 338 WWSLGAIMYEMLVGYPPF----YSDDPVTTCRKI---VHWKNHLKFPEEARLTPEAKDLI 390
WW+LG +M+EM+ G PF SD+P V + ++ P L+ +A ++
Sbjct: 189 WWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS--LSVKAASVL 246
Query: 391 CRLLC-DVEHRLG---TLGSEQIKAHPWFKDIAWDKLYEMEAA--YKPEVNGVLDTQNF 443
L D + RLG G I+ HP+F+++ WD + + + +KP ++G NF
Sbjct: 247 KSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNF 305
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 173/359 (48%), Gaps = 73/359 (20%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE 162
+ + DFDLL +IGRG++ +V L + KK+ IYAMK +KK + ++ V+ E+++ +
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 163 VASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
++H +V L+ FQ L+ ++EY+ GGD+ ARFY A+ LA+
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 125
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK----PLDCTNLSAIXXXXXXXXXXXXX 277
+H+ I+RD+K DN+LLD GH+KL+D+G+CK P D T+
Sbjct: 126 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF--------------- 170
Query: 278 SMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECD 337
CG TP+YIAPE+L + YG D
Sbjct: 171 ------------CG--------------------------TPNYIAPEILRGEDYGFSVD 192
Query: 338 WWSLGAIMYEMLVGYPPF----YSDDPVTTCRKI---VHWKNHLKFPEEARLTPEAKDLI 390
WW+LG +M+EM+ G PF SD+P V + ++ P L+ +A ++
Sbjct: 193 WWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS--LSVKAASVL 250
Query: 391 CRLLC-DVEHRLG---TLGSEQIKAHPWFKDIAWDKLYEMEAA--YKPEVNGVLDTQNF 443
L D + RLG G I+ HP+F+++ WD + + + +KP ++G NF
Sbjct: 251 KSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNF 309
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 160/324 (49%), Gaps = 55/324 (16%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
+DF I+G G+F V L +E + YA+K L+K ++ +V +V ER++++ +
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
VKLY++FQD E LY + Y G++ RFY A+ V A+E +H
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
IHRD+KP+N+LL+++ H++++DFG K L
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS---------------------------- 180
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
PES R A S VGT Y++PE+L +K D W+LG I+
Sbjct: 181 PESKQAR-------------------ANSFVGTAQYVSPELLTEKSACKSSDLWALGCII 221
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHRLGT- 403
Y+++ G PPF + + +KI+ K FPE + P+A+DL+ +LL D RLG
Sbjct: 222 YQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCE 277
Query: 404 --LGSEQIKAHPWFKDIAWDKLYE 425
G +KAHP+F+ + W+ L++
Sbjct: 278 EMEGYGPLKAHPFFESVTWENLHQ 301
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 160/324 (49%), Gaps = 55/324 (16%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
+DF I+G G+F V L +E + YA+K L+K ++ +V +V ER++++ +
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
VKLY++FQD E LY + Y G++ RFY A+ V A+E +H
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
IHRD+KP+N+LL+++ H++++DFG K L
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS---------------------------- 184
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
PES R A S VGT Y++PE+L +K D W+LG I+
Sbjct: 185 PESKQAR-------------------ANSFVGTAQYVSPELLTEKSACKSSDLWALGCII 225
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHRLGT- 403
Y+++ G PPF + + +KI+ K FPE + P+A+DL+ +LL D RLG
Sbjct: 226 YQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCE 281
Query: 404 --LGSEQIKAHPWFKDIAWDKLYE 425
G +KAHP+F+ + W+ L++
Sbjct: 282 EMEGYGPLKAHPFFESVTWENLHQ 305
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 160/324 (49%), Gaps = 55/324 (16%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
+DF I+G G+F V L +E + YA+K L+K ++ +V +V ER++++ +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
VKLY++FQD E LY + Y G++ RFY A+ V A+E +H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
IHRD+KP+N+LL+++ H++++DFG K L
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS---------------------------- 181
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
PES R A + VGT Y++PE+L +K D W+LG I+
Sbjct: 182 PESKQAR-------------------ANAFVGTAQYVSPELLTEKSACKSSDLWALGCII 222
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHRLGT- 403
Y+++ G PPF + + +KI+ K FPE + P+A+DL+ +LL D RLG
Sbjct: 223 YQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCE 278
Query: 404 --LGSEQIKAHPWFKDIAWDKLYE 425
G +KAHP+F+ + W+ L++
Sbjct: 279 EMEGYGPLKAHPFFESVTWENLHQ 302
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 159/324 (49%), Gaps = 55/324 (16%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
+DF I+G G+F V L +E + YA+K L+K ++ +V +V ER++++ +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
VKLY++FQD E LY + Y G + RFY A+ V A+E +H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
IHRD+KP+N+LL+++ H++++DFG K L
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS---------------------------- 183
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
PES R A S VGT Y++PE+L +K D W+LG I+
Sbjct: 184 PESKQAR-------------------ANSFVGTAQYVSPELLTEKSASKSSDLWALGCII 224
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHRLGT- 403
Y+++ G PPF + + +KI+ K FPE + P+A+DL+ +LL D RLG
Sbjct: 225 YQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCE 280
Query: 404 --LGSEQIKAHPWFKDIAWDKLYE 425
G +KAHP+F+ + W+ L++
Sbjct: 281 EMEGYGPLKAHPFFESVTWENLHQ 304
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 159/324 (49%), Gaps = 55/324 (16%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
+DF I+G G+F V L +E + YA+K L+K ++ +V +V ER++++ +
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
VKLY++FQD E LY + Y G++ RFY A+ V A+E +H
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
IHRD+KP+N+LL+++ H++++DFG K L
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS---------------------------- 180
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
PES R A VGT Y++PE+L +K D W+LG I+
Sbjct: 181 PESKQAR-------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 221
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHRLGT- 403
Y+++ G PPF + + +KI+ K FPE + P+A+DL+ +LL D RLG
Sbjct: 222 YQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCE 277
Query: 404 --LGSEQIKAHPWFKDIAWDKLYE 425
G +KAHP+F+ + W+ L++
Sbjct: 278 EMEGYGPLKAHPFFESVTWENLHQ 301
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 159/324 (49%), Gaps = 55/324 (16%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
+DF I+G G+F V L +E + YA+K L+K ++ +V +V ER++++ +
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
VKLY++FQD E LY + Y G++ RFY A+ V A+E +H
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
IHRD+KP+N+LL+++ H++++DFG K L
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS---------------------------- 159
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
PES R A VGT Y++PE+L +K D W+LG I+
Sbjct: 160 PESKQAR-------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 200
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHRLGT- 403
Y+++ G PPF + + +KI+ K FPE + P+A+DL+ +LL D RLG
Sbjct: 201 YQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCE 256
Query: 404 --LGSEQIKAHPWFKDIAWDKLYE 425
G +KAHP+F+ + W+ L++
Sbjct: 257 EMEGYGPLKAHPFFESVTWENLHQ 280
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 159/324 (49%), Gaps = 55/324 (16%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
+DF I+G G+F V L +E + YA+K L+K ++ +V +V ER++++ +
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
VKLY++FQD E LY + Y G++ RFY A+ V A+E +H
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
IHRD+KP+N+LL+++ H++++DFG K L
Sbjct: 127 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS---------------------------- 158
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
PES R A VGT Y++PE+L +K D W+LG I+
Sbjct: 159 PESKQAR-------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 199
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHRLGT- 403
Y+++ G PPF + + +KI+ K FPE + P+A+DL+ +LL D RLG
Sbjct: 200 YQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCE 255
Query: 404 --LGSEQIKAHPWFKDIAWDKLYE 425
G +KAHP+F+ + W+ L++
Sbjct: 256 EMEGYGPLKAHPFFESVTWENLHQ 279
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 159/324 (49%), Gaps = 55/324 (16%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
+DF I+G G+F V L +E + YA+K L+K ++ +V +V ER++++ +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
VKLY++FQD E LY + Y G++ RFY A+ V A+E +H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
IHRD+KP+N+LL+++ H++++DFG K L
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS---------------------------- 183
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
PES R A VGT Y++PE+L +K D W+LG I+
Sbjct: 184 PESKQAR-------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 224
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHRLGT- 403
Y+++ G PPF + + +KI+ K FPE + P+A+DL+ +LL D RLG
Sbjct: 225 YQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCE 280
Query: 404 --LGSEQIKAHPWFKDIAWDKLYE 425
G +KAHP+F+ + W+ L++
Sbjct: 281 EMEGYGPLKAHPFFESVTWENLHQ 304
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 159/324 (49%), Gaps = 55/324 (16%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
+DF I+G G+F V L +E + YA+K L+K ++ +V +V ER++++ +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
VKLY++FQD E LY + Y G++ RFY A+ V A+E +H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
IHRD+KP+N+LL+++ H++++DFG K L
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS---------------------------- 181
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
PES R A VGT Y++PE+L +K D W+LG I+
Sbjct: 182 PESKQAR-------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 222
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHRLGT- 403
Y+++ G PPF + + +KI+ K FPE + P+A+DL+ +LL D RLG
Sbjct: 223 YQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCE 278
Query: 404 --LGSEQIKAHPWFKDIAWDKLYE 425
G +KAHP+F+ + W+ L++
Sbjct: 279 EMEGYGPLKAHPFFESVTWENLHQ 302
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 159/324 (49%), Gaps = 55/324 (16%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
+DF I+G G+F V L +E + YA+K L+K ++ +V +V ER++++ +
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
VKLY++FQD E LY + Y G++ RFY A+ V A+E +H
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
IHRD+KP+N+LL+++ H++++DFG K L
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS---------------------------- 165
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
PES R A VGT Y++PE+L +K D W+LG I+
Sbjct: 166 PESKQAR-------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 206
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHRLGT- 403
Y+++ G PPF + + +KI+ K FPE + P+A+DL+ +LL D RLG
Sbjct: 207 YQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCE 262
Query: 404 --LGSEQIKAHPWFKDIAWDKLYE 425
G +KAHP+F+ + W+ L++
Sbjct: 263 EMEGYGPLKAHPFFESVTWENLHQ 286
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 159/324 (49%), Gaps = 55/324 (16%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
+DF I+G G+F V L +E + YA+K L+K ++ +V +V ER++++ +
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
VKLY++FQD E LY + Y G++ RFY A+ V A+E +H
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
IHRD+KP+N+LL+++ H++++DFG K L
Sbjct: 129 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS---------------------------- 160
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
PES R A VGT Y++PE+L +K D W+LG I+
Sbjct: 161 PESKQAR-------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 201
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHRLGT- 403
Y+++ G PPF + + +KI+ K FPE + P+A+DL+ +LL D RLG
Sbjct: 202 YQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCE 257
Query: 404 --LGSEQIKAHPWFKDIAWDKLYE 425
G +KAHP+F+ + W+ L++
Sbjct: 258 EMEGYGPLKAHPFFESVTWENLHQ 281
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 159/324 (49%), Gaps = 55/324 (16%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
+DF I+G G+F V L +E + YA+K L+K ++ +V +V ER++++ +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
VKLY++FQD E LY + Y G++ RFY A+ V A+E +H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
IHRD+KP+N+LL+++ H++++DFG K L
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS---------------------------- 181
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
PES R A VGT Y++PE+L +K D W+LG I+
Sbjct: 182 PESKQAR-------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 222
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHRLGT- 403
Y+++ G PPF + + +KI+ K FPE + P+A+DL+ +LL D RLG
Sbjct: 223 YQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCE 278
Query: 404 --LGSEQIKAHPWFKDIAWDKLYE 425
G +KAHP+F+ + W+ L++
Sbjct: 279 EMEGYGPLKAHPFFESVTWENLHQ 302
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 159/324 (49%), Gaps = 55/324 (16%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
+DF I+G G+F V L +E + YA+K L+K ++ +V +V ER++++ +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
VKLY++FQD E LY + Y G++ RFY A+ V A+E +H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
IHRD+KP+N+LL+++ H++++DFG K L
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS---------------------------- 183
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
PES R A VGT Y++PE+L +K D W+LG I+
Sbjct: 184 PESKQAR-------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 224
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHRLGT- 403
Y+++ G PPF + + +KI+ K FPE + P+A+DL+ +LL D RLG
Sbjct: 225 YQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCE 280
Query: 404 --LGSEQIKAHPWFKDIAWDKLYE 425
G +KAHP+F+ + W+ L++
Sbjct: 281 EMEGYGPLKAHPFFESVTWENLHQ 304
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 159/324 (49%), Gaps = 55/324 (16%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
+DF I+G G+F V L +E + YA+K L+K ++ +V +V ER++++ +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
VKLY++FQD E LY + Y G++ RFY A+ V A+E +H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
IHRD+KP+N+LL+++ H++++DFG K L
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS---------------------------- 183
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
PES R A VGT Y++PE+L +K D W+LG I+
Sbjct: 184 PESKQAR-------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 224
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHRLGT- 403
Y+++ G PPF + + +KI+ K FPE + P+A+DL+ +LL D RLG
Sbjct: 225 YQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCE 280
Query: 404 --LGSEQIKAHPWFKDIAWDKLYE 425
G +KAHP+F+ + W+ L++
Sbjct: 281 EMEGYGPLKAHPFFESVTWENLHQ 304
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 159/324 (49%), Gaps = 55/324 (16%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
+DF I+G G+F V L +E + YA+K L+K ++ +V +V ER++++ +
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
VKLY++FQD E LY + Y G++ RFY A+ V A+E +H
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
IHRD+KP+N+LL+++ H++++DFG K L
Sbjct: 130 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS---------------------------- 161
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
PES R A VGT Y++PE+L +K D W+LG I+
Sbjct: 162 PESKQAR-------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 202
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHRLGT- 403
Y+++ G PPF + + +KI+ K FPE + P+A+DL+ +LL D RLG
Sbjct: 203 YQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCE 258
Query: 404 --LGSEQIKAHPWFKDIAWDKLYE 425
G +KAHP+F+ + W+ L++
Sbjct: 259 EMEGYGPLKAHPFFESVTWENLHQ 282
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 159/324 (49%), Gaps = 55/324 (16%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
+DF I+G G+F V L +E + YA+K L+K ++ +V +V ER++++ +
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
VKLY++FQD E LY + Y G++ RFY A+ V A+E +H
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
IHRD+KP+N+LL+++ H++++DFG K L
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS---------------------------- 184
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
PES R A VGT Y++PE+L +K D W+LG I+
Sbjct: 185 PESKQAR-------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 225
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHRLGT- 403
Y+++ G PPF + + +KI+ K FPE + P+A+DL+ +LL D RLG
Sbjct: 226 YQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCE 281
Query: 404 --LGSEQIKAHPWFKDIAWDKLYE 425
G +KAHP+F+ + W+ L++
Sbjct: 282 EMEGYGPLKAHPFFESVTWENLHQ 305
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 158/324 (48%), Gaps = 55/324 (16%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
+DF I+G G+F V L +E + YA+K L+K ++ +V +V ER++++ +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
VKLY++FQD E LY + Y G++ RFY A+ V A+E +H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
IHRD+KP+N+LL+++ H++++DFG K L
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS---------------------------- 183
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
PES R A VGT Y++PE+L +K D W+LG I+
Sbjct: 184 PESKQAR-------------------ANXFVGTAQYVSPELLTEKSAXKSSDLWALGCII 224
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHRLG-- 402
Y+++ G PPF + + KI+ K FPE + P+A+DL+ +LL D RLG
Sbjct: 225 YQLVAGLPPFRAGNEGLIFAKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCE 280
Query: 403 -TLGSEQIKAHPWFKDIAWDKLYE 425
G +KAHP+F+ + W+ L++
Sbjct: 281 EMEGYGPLKAHPFFESVTWENLHQ 304
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 174/353 (49%), Gaps = 64/353 (18%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
++ + DF+ L ++G+G+FG+V L K + +YA+K LKK ++ VE E+ +LA
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLA 74
Query: 162 EV-ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIE 220
+ + +L+ FQ + LY +MEY+ GGD+ A FY A+ + +
Sbjct: 75 LLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLF 134
Query: 221 SIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMD 280
+HK I+RD+K DN++LD GH+K++DFG+CK
Sbjct: 135 FLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCK-----------------------EHM 171
Query: 281 VDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 340
+DG C GTPDYIAPE++ + YG DWW+
Sbjct: 172 MDGVTTREFC--------------------------GTPDYIAPEIIAYQPYGKSVDWWA 205
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEH- 399
G ++YEML G PPF +D + I+ ++++ +P+ L+ EA IC+ L +H
Sbjct: 206 YGVLLYEMLAGQPPFDGEDEDELFQSIM--EHNVSYPKS--LSKEAVS-ICKGLM-TKHP 259
Query: 400 --RLGT--LGSEQIKAHPWFKDIAWDKL--YEMEAAYKPEVNGVLDTQNFMKF 446
RLG G ++ H +F+ I W+KL E++ +KP+V G +NF KF
Sbjct: 260 AKRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPFKPKVCGK-GAENFDKF 311
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 158/324 (48%), Gaps = 55/324 (16%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
+DF I+G G+F L +E + YA+K L+K ++ +V +V ER++++ +
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
VKLY++FQD E LY + Y G++ RFY A+ V A+E +H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
IHRD+KP+N+LL+++ H++++DFG K L
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS---------------------------- 181
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
PES R A VGT Y++PE+L +K D W+LG I+
Sbjct: 182 PESKQAR-------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 222
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHRLGT- 403
Y+++ G PPF + + +KI+ K FPE + P+A+DL+ +LL D RLG
Sbjct: 223 YQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCE 278
Query: 404 --LGSEQIKAHPWFKDIAWDKLYE 425
G +KAHP+F+ + W+ L++
Sbjct: 279 EMEGYGPLKAHPFFESVTWENLHQ 302
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 158/324 (48%), Gaps = 55/324 (16%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
+DF I+G G+F V L +E + YA+K L+K ++ +V +V ER++++ +
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
VKLY+ FQD E LY + Y G++ RFY A+ V A+E +H
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
IHRD+KP+N+LL+++ H++++DFG K L
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS---------------------------- 188
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
PES R A VGT Y++PE+L +K D W+LG I+
Sbjct: 189 PESKQAR-------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 229
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHRLGT- 403
Y+++ G PPF + + +KI+ K FPE + P+A+DL+ +LL D RLG
Sbjct: 230 YQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCE 285
Query: 404 --LGSEQIKAHPWFKDIAWDKLYE 425
G +KAHP+F+ + W+ L++
Sbjct: 286 EMEGYGPLKAHPFFESVTWENLHQ 309
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 158/324 (48%), Gaps = 55/324 (16%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
+DF I+G G+F V L +E + YA+K L+K ++ +V +V ER++++ +
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
VKLY++FQD E LY + Y G++ RFY A+ V A+E +H
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
IHRD+KP+N+LL+++ H++++DFG K L
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS---------------------------- 186
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
PES R A VGT Y++PE+L +K D W+LG I+
Sbjct: 187 PESKQAR-------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 227
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHRLGT- 403
Y+++ G PPF + + +KI+ K FP A P+A+DL+ +LL D RLG
Sbjct: 228 YQLVAGLPPFRAGNEYLIFQKII--KLEYDFP--AAFFPKARDLVEKLLVLDATKRLGCE 283
Query: 404 --LGSEQIKAHPWFKDIAWDKLYE 425
G +KAHP+F+ + W+ L++
Sbjct: 284 EMEGYGPLKAHPFFESVTWENLHQ 307
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 158/324 (48%), Gaps = 55/324 (16%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
+DF I+G G+F V L +E + YA+K L+K ++ +V +V ER++++ +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
VKLY++FQD E LY + Y G++ RFY A+ V A+E +H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
IHRD+KP+N+LL+++ H++++DFG K L
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS---------------------------- 183
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
PES R A VGT Y++PE+L +K D W+LG I+
Sbjct: 184 PESKQAR-------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 224
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHRLGT- 403
Y+++ G PPF + + KI+ K FPE + P+A+DL+ +LL D RLG
Sbjct: 225 YQLVAGLPPFRAGNEGLIFAKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCE 280
Query: 404 --LGSEQIKAHPWFKDIAWDKLYE 425
G +KAHP+F+ + W+ L++
Sbjct: 281 EMEGYGPLKAHPFFESVTWENLHQ 304
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 197/422 (46%), Gaps = 74/422 (17%)
Query: 73 SSDVPEEEQINILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGN 132
+ PEE+ N + + R ++ + DF+ L ++G+G+FG+V L + K +
Sbjct: 314 GTKAPEEKTANTISKFDNNGN------RDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDE 367
Query: 133 IYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGG 191
+YA+K LKK ++ VE E+ +LA + +L+ FQ + LY +MEY+ GG
Sbjct: 368 LYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGG 427
Query: 192 DVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFG 251
D+ A FY A+ + + + I+RD+K DN++LD GH+K++DFG
Sbjct: 428 DLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFG 487
Query: 252 LCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKL 311
+CK N+ DG + CG
Sbjct: 488 MCK----ENI-------------------WDGVTTKXFCG-------------------- 504
Query: 312 AYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWK 371
TPDYIAPE++ + YG DWW+ G ++YEML G PF +D + I+ +
Sbjct: 505 ------TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM--E 556
Query: 372 NHLKFPEEARLTPEAKDLICRLLCDVEH---RLGT--LGSEQIKAHPWFKDIAWDKL--Y 424
+++ +P+ ++ EA IC+ L +H RLG G IK H +F+ I W+KL
Sbjct: 557 HNVAYPKS--MSKEAV-AICKGLM-TKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERK 612
Query: 425 EMEAAYKPEVNGVLDTQNFMKFDEVESQTPKRTGSGPMRKMMLTPKDLSFVGYTYKNFEA 484
E++ YKP+ +G +N FD ++ P P ++++ F G+ + N E
Sbjct: 613 EIQPPYKPKASG----RNAENFDRFFTRHPPVLXP-PDQEVIRNIDQSEFEGFXFVNSEF 667
Query: 485 VK 486
+K
Sbjct: 668 LK 669
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 188/395 (47%), Gaps = 68/395 (17%)
Query: 100 RHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL 159
R ++ + DF+ L ++G+G+FG+V L + K + +YA+K LKK ++ VE E+ +
Sbjct: 14 RDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRV 73
Query: 160 LAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLA 218
LA + +L+ FQ + LY +MEY+ GGD+ A FY A+ +
Sbjct: 74 LALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG 133
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+ + I+RD+K DN++LD GH+K++DFG+CK N+
Sbjct: 134 LFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK----ENIW---------------- 173
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
DG + CG TPDYIAPE++ + YG DW
Sbjct: 174 ---DGVTTKXFCG--------------------------TPDYIAPEIIAYQPYGKSVDW 204
Query: 339 WSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVE 398
W+ G ++YEML G PF +D + I+ ++++ +P+ ++ EA IC+ L +
Sbjct: 205 WAFGVLLYEMLAGQAPFEGEDEDELFQSIM--EHNVAYPKS--MSKEAV-AICKGLM-TK 258
Query: 399 H---RLGT--LGSEQIKAHPWFKDIAWDKL--YEMEAAYKPEVNGVLDTQNFMKFDEVES 451
H RLG G IK H +F+ I W+KL E++ YKP+ G +N FD +
Sbjct: 259 HPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKACG----RNAENFDRFFT 314
Query: 452 QTPKRTGSGPMRKMMLTPKDLSFVGYTYKNFEAVK 486
+ P P ++++ F G+ + N E +K
Sbjct: 315 RHPPVLXP-PDQEVIRNIDQSEFEGFXFVNSEFLK 348
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 154/327 (47%), Gaps = 57/327 (17%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE 162
++ D F++L IG+G+FG+V + Q+ + +YAMK + K + + R +V +V E ++
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 163 VASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI 222
+ +V L+YSFQD E ++++++ L GGD+ + +I + V+A++ +
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYL 131
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
IHRD+KPDN+LLD++GH+ ++DF N++A+
Sbjct: 132 QNQRIIHRDMKPDNILLDEHGHVHITDF---------NIAAM------------------ 164
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKK---GYGMECDWW 339
+ R + GT Y+APE+ + GY DWW
Sbjct: 165 -----------------------LPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWW 201
Query: 340 SLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVE 398
SLG YE+L G P++ T+ ++IVH + + E L+ +LL + +
Sbjct: 202 SLGVTAYELLRGRRPYHIRSS-TSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPD 260
Query: 399 HRLGTLGSEQIKAHPWFKDIAWDKLYE 425
R L ++ P+ DI WD +++
Sbjct: 261 QRFSQLSD--VQNFPYMNDINWDAVFQ 285
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 166/367 (45%), Gaps = 66/367 (17%)
Query: 98 LKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAER 157
L+R ++ + F ++G+G FGEV CQ + +G +YA KKL+K + R E+
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEK 235
Query: 158 NLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR--FYIAQS 215
+L +V S +V L Y+++ + L L++ + GGD+ AR FY A+
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEI 295
Query: 216 VLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
+E +H+ ++RD+KP+N+LLD +GH+++SD GL
Sbjct: 296 CCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL-------------------AVHV 336
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
+ GR TVG Y+APEV+ + Y
Sbjct: 337 PEGQTIKGRV----------------------------GTVG---YMAPEVVKNERYTFS 365
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEE--ARLTPEAKDLICRL 393
DWW+LG ++YEM+ G PF ++ + PEE R +P+A+ L +L
Sbjct: 366 PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV--PEEYSERFSPQARSLCSQL 423
Query: 394 LC-DVEHRLGTLG--SEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNG-----VLDTQNF 443
LC D RLG G + ++K HP FK + + +L +E +KP+ VLD + F
Sbjct: 424 LCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQF 483
Query: 444 MKFDEVE 450
VE
Sbjct: 484 STVKGVE 490
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 166/367 (45%), Gaps = 66/367 (17%)
Query: 98 LKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAER 157
L+R ++ + F ++G+G FGEV CQ + +G +YA KKL+K + R E+
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEK 235
Query: 158 NLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR--FYIAQS 215
+L +V S +V L Y+++ + L L++ + GGD+ AR FY A+
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEI 295
Query: 216 VLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
+E +H+ ++RD+KP+N+LLD +GH+++SD GL
Sbjct: 296 CCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL-------------------AVHV 336
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
+ GR TVG Y+APEV+ + Y
Sbjct: 337 PEGQTIKGRV----------------------------GTVG---YMAPEVVKNERYTFS 365
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEE--ARLTPEAKDLICRL 393
DWW+LG ++YEM+ G PF ++ + PEE R +P+A+ L +L
Sbjct: 366 PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV--PEEYSERFSPQARSLCSQL 423
Query: 394 LC-DVEHRLGTLG--SEQIKAHPWFKDIAWDKLYE--MEAAYKPEVNG-----VLDTQNF 443
LC D RLG G + ++K HP FK + + +L +E +KP+ VLD + F
Sbjct: 424 LCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQF 483
Query: 444 MKFDEVE 450
VE
Sbjct: 484 STVKGVE 490
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 174/370 (47%), Gaps = 75/370 (20%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE 162
++++DF + IIGRG FGEV C++ +G +YAMK L K + + ER +L+
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 244
Query: 163 VAS-HC--IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
V++ C IV + Y+F + L I++ + GGD+ RFY A+ +L +
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 304
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
E +H ++RD+KP N+LLD++GH+++SD GL
Sbjct: 305 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGL--------------------------- 337
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKK-GYGMECDW 338
C K P +++VGT Y+APEVL K Y DW
Sbjct: 338 ---------ACDFSKKKP---------------HASVGTHGYMAPEVLQKGVAYDSSADW 373
Query: 339 WSLGAIMYEMLVGYPPFY---SDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
+SLG +++++L G+ PF + D R + ++ P+ +PE + L+ LL
Sbjct: 374 FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA--VELPDS--FSPELRSLLEGLLQ 429
Query: 396 -DVEHRLGTL--GSEQIKAHPWFKDIAWDKLYEMEAAYKP-------EVNGVLDTQNFMK 445
DV RLG L G++++K P+F+ + W ++ + Y P EVN D +
Sbjct: 430 RDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQK--YPPPLIPPRGEVNAA-DAFDIGS 486
Query: 446 FDEVESQTPK 455
FDE +++ K
Sbjct: 487 FDEEDTKGIK 496
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 174/370 (47%), Gaps = 75/370 (20%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE 162
++++DF + IIGRG FGEV C++ +G +YAMK L K + + ER +L+
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 163 VAS-HC--IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
V++ C IV + Y+F + L I++ + GGD+ RFY A+ +L +
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
E +H ++RD+KP N+LLD++GH+++SD GL
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGL--------------------------- 338
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKK-GYGMECDW 338
C K P +++VGT Y+APEVL K Y DW
Sbjct: 339 ---------ACDFSKKKP---------------HASVGTHGYMAPEVLQKGVAYDSSADW 374
Query: 339 WSLGAIMYEMLVGYPPFY---SDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
+SLG +++++L G+ PF + D R + ++ P+ +PE + L+ LL
Sbjct: 375 FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA--VELPDS--FSPELRSLLEGLLQ 430
Query: 396 -DVEHRLGTL--GSEQIKAHPWFKDIAWDKLYEMEAAYKP-------EVNGVLDTQNFMK 445
DV RLG L G++++K P+F+ + W ++ + Y P EVN D +
Sbjct: 431 RDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQK--YPPPLIPPRGEVNAA-DAFDIGS 487
Query: 446 FDEVESQTPK 455
FDE +++ K
Sbjct: 488 FDEEDTKGIK 497
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 174/370 (47%), Gaps = 75/370 (20%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE 162
++++DF + IIGRG FGEV C++ +G +YAMK L K + + ER +L+
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 163 VAS-HC--IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
V++ C IV + Y+F + L I++ + GGD+ RFY A+ +L +
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
E +H ++RD+KP N+LLD++GH+++SD GL
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGL--------------------------- 338
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKK-GYGMECDW 338
C K P +++VGT Y+APEVL K Y DW
Sbjct: 339 ---------ACDFSKKKP---------------HASVGTHGYMAPEVLQKGVAYDSSADW 374
Query: 339 WSLGAIMYEMLVGYPPFY---SDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
+SLG +++++L G+ PF + D R + ++ P+ +PE + L+ LL
Sbjct: 375 FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA--VELPDS--FSPELRSLLEGLLQ 430
Query: 396 -DVEHRLGTL--GSEQIKAHPWFKDIAWDKLYEMEAAYKP-------EVNGVLDTQNFMK 445
DV RLG L G++++K P+F+ + W ++ + Y P EVN D +
Sbjct: 431 RDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQK--YPPPLIPPRGEVNAA-DAFDIGS 487
Query: 446 FDEVESQTPK 455
FDE +++ K
Sbjct: 488 FDEEDTKGIK 497
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 174/370 (47%), Gaps = 75/370 (20%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE 162
++++DF + IIGRG FGEV C++ +G +YAMK L K + + ER +L+
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 163 VAS-HC--IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
V++ C IV + Y+F + L I++ + GGD+ RFY A+ +L +
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
E +H ++RD+KP N+LLD++GH+++SD GL
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGL--------------------------- 338
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKK-GYGMECDW 338
C K P +++VGT Y+APEVL K Y DW
Sbjct: 339 ---------ACDFSKKKP---------------HASVGTHGYMAPEVLQKGVAYDSSADW 374
Query: 339 WSLGAIMYEMLVGYPPFY---SDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
+SLG +++++L G+ PF + D R + ++ P+ +PE + L+ LL
Sbjct: 375 FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA--VELPDS--FSPELRSLLEGLLQ 430
Query: 396 -DVEHRLGTL--GSEQIKAHPWFKDIAWDKLYEMEAAYKP-------EVNGVLDTQNFMK 445
DV RLG L G++++K P+F+ + W ++ + Y P EVN D +
Sbjct: 431 RDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQK--YPPPLIPPRGEVNAA-DAFDIGS 487
Query: 446 FDEVESQTPK 455
FDE +++ K
Sbjct: 488 FDEEDTKGIK 497
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 141/313 (45%), Gaps = 57/313 (18%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
+++DFD+ +G+G FG V L +E++S I A+K L K+++ G +R E + + +
Sbjct: 10 TLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL 69
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
I++LY F DA +YLI+EY P G V YI + A+ H
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
IHRDIKP+NLLL NG +K++DFG
Sbjct: 130 SKRVIHRDIKPENLLLGSNGELKIADFG-------------------------------- 157
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 343
W H +RR + GT DY+ PE++ + + + D WSLG
Sbjct: 158 ----------WSV------HAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 198
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGT 403
+ YE LVG PPF + T R+I + FP+ +T A+DLI RLL + T
Sbjct: 199 LCYEFLVGMPPFEAHTYQETYRRIS--RVEFTFPD--FVTEGARDLISRLLKHNASQRLT 254
Query: 404 LGSEQIKAHPWFK 416
L ++ HPW K
Sbjct: 255 LA--EVLEHPWIK 265
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 141/313 (45%), Gaps = 57/313 (18%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
+++DFD+ +G+G FG V L +E++S I A+K L K+++ G +R E + + +
Sbjct: 10 TLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL 69
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
I++LY F DA +YLI+EY P G V YI + A+ H
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
IHRDIKP+NLLL NG +K++DFG
Sbjct: 130 SKRVIHRDIKPENLLLGSNGELKIADFG-------------------------------- 157
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 343
W H +RR + GT DY+ PE++ + + + D WSLG
Sbjct: 158 ----------WSV------HAPSSRRD---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 198
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGT 403
+ YE LVG PPF + T R+I + FP+ +T A+DLI RLL + T
Sbjct: 199 LCYEFLVGMPPFEAHTYQETYRRIS--RVEFTFPD--FVTEGARDLISRLLKHNASQRLT 254
Query: 404 LGSEQIKAHPWFK 416
L ++ HPW K
Sbjct: 255 LA--EVLEHPWIK 265
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 157/335 (46%), Gaps = 60/335 (17%)
Query: 98 LKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAER 157
L+ + D F ++GRG FGEV CQ K +G +YA KKL K + R + E+
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 158 NLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXV----ARFYIA 213
+LA+V S IV L Y+F+ L L+M + GGD+ A FY A
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 214 QSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXX 273
Q V +E +H+ N I+RD+KP+N+LLD +G++++SD GL
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV------------------- 337
Query: 274 XXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYG 333
+L+ Q + A GTP ++APE+LL + Y
Sbjct: 338 --------------------------ELKAGQTKTKGYA----GTPGFMAPELLLGEEYD 367
Query: 334 MECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVH--WKNHLKFPEEARLTPEAKDLIC 391
D+++LG +YEM+ PF + +++ + + +P+ + +P +KD
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD--KFSPASKDFCE 425
Query: 392 RLLC-DVEHRLGTL-GS-EQIKAHPWFKDIAWDKL 423
LL D E RLG GS + ++ HP F+DI+W +L
Sbjct: 426 ALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQL 460
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 157/335 (46%), Gaps = 60/335 (17%)
Query: 98 LKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAER 157
L+ + D F ++GRG FGEV CQ K +G +YA KKL K + R + E+
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 158 NLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXV----ARFYIA 213
+LA+V S IV L Y+F+ L L+M + GGD+ A FY A
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 214 QSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXX 273
Q V +E +H+ N I+RD+KP+N+LLD +G++++SD GL
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV------------------- 337
Query: 274 XXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYG 333
+L+ Q + A GTP ++APE+LL + Y
Sbjct: 338 --------------------------ELKAGQTKTKGYA----GTPGFMAPELLLGEEYD 367
Query: 334 MECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVH--WKNHLKFPEEARLTPEAKDLIC 391
D+++LG +YEM+ PF + +++ + + +P+ + +P +KD
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD--KFSPASKDFCE 425
Query: 392 RLLC-DVEHRLGTL-GS-EQIKAHPWFKDIAWDKL 423
LL D E RLG GS + ++ HP F+DI+W +L
Sbjct: 426 ALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQL 460
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 157/335 (46%), Gaps = 60/335 (17%)
Query: 98 LKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAER 157
L+ + D F ++GRG FGEV CQ K +G +YA KKL K + R + E+
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 158 NLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXV----ARFYIA 213
+LA+V S IV L Y+F+ L L+M + GGD+ A FY A
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 214 QSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXX 273
Q V +E +H+ N I+RD+KP+N+LLD +G++++SD GL
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV------------------- 337
Query: 274 XXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYG 333
+L+ Q + A GTP ++APE+LL + Y
Sbjct: 338 --------------------------ELKAGQTKTKGYA----GTPGFMAPELLLGEEYD 367
Query: 334 MECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVH--WKNHLKFPEEARLTPEAKDLIC 391
D+++LG +YEM+ PF + +++ + + +P+ + +P +KD
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD--KFSPASKDFCE 425
Query: 392 RLLC-DVEHRLGTL-GS-EQIKAHPWFKDIAWDKL 423
LL D E RLG GS + ++ HP F+DI+W +L
Sbjct: 426 ALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQL 460
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 157/335 (46%), Gaps = 60/335 (17%)
Query: 98 LKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAER 157
L+ + D F ++GRG FGEV CQ K +G +YA KKL K + R + E+
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 158 NLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXV----ARFYIA 213
+LA+V S IV L Y+F+ L L+M + GGD+ A FY A
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 214 QSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXX 273
Q V +E +H+ N I+RD+KP+N+LLD +G++++SD GL
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV------------------- 337
Query: 274 XXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYG 333
+L+ Q + A GTP ++APE+LL + Y
Sbjct: 338 --------------------------ELKAGQTKTKGYA----GTPGFMAPELLLGEEYD 367
Query: 334 MECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVH--WKNHLKFPEEARLTPEAKDLIC 391
D+++LG +YEM+ PF + +++ + + +P+ + +P +KD
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD--KFSPASKDFCE 425
Query: 392 RLLC-DVEHRLGTL-GS-EQIKAHPWFKDIAWDKL 423
LL D E RLG GS + ++ HP F+DI+W +L
Sbjct: 426 ALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQL 460
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 153/344 (44%), Gaps = 65/344 (18%)
Query: 72 ASSDVPEEEQINILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSG 131
A + PEEE + K+ E K+ ++ +++DF++ +G+G FG V L +EK+S
Sbjct: 8 APENNPEEELASKQKNEESKKRQW--------ALEDFEIGRPLGKGKFGNVYLAREKQSK 59
Query: 132 NIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGG 191
I A+K L K+++ G +R E + + + I++LY F DA +YLI+EY P G
Sbjct: 60 FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 119
Query: 192 DVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFG 251
V YI + A+ H IHRDIKP+NLLL G +K++DFG
Sbjct: 120 TVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 179
Query: 252 LCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKL 311
W H +RR
Sbjct: 180 ------------------------------------------WSV------HAPSSRRT- 190
Query: 312 AYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWK 371
+ GT DY+ PE++ + + + D WSLG + YE LVG PPF ++ T ++I +
Sbjct: 191 --TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--R 246
Query: 372 NHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWF 415
FP+ +T A+DLI RLL + L ++ HPW
Sbjct: 247 VEFTFPD--FVTEGARDLISRLLKHNPSQRPML--REVLEHPWI 286
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 144/320 (45%), Gaps = 57/320 (17%)
Query: 96 MRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRA 155
M K+ + +++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 156 ERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQS 215
E + + + I++LY F DA +YLI+EY P G+V YI +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL 122
Query: 216 VLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
A+ H IHRDIKP+NLLL G +K++DFG
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 158
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
W H +RR + GT DY+ PE++ + + +
Sbjct: 159 ------------------WSV------HAPSSRRT---TLCGTLDYLPPEMIEGRMHDEK 191
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
D WSLG + YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLK 247
Query: 396 DVEHRLGTLGSEQIKAHPWF 415
+ L ++ HPW
Sbjct: 248 HNPSQRPML--REVLEHPWI 265
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 146/325 (44%), Gaps = 59/325 (18%)
Query: 93 TEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH 152
T + + K ++DDFD++ +G+G FG V L +EK++ I A+K L KS++ G
Sbjct: 1 TALAEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 60
Query: 153 VRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYI 212
+R E + + + I+++Y F D + +YL++E+ P G++ + ++
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 120
Query: 213 AQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXX 272
+ A+ H+ IHRDIKP+NLL+ G +K++DFG
Sbjct: 121 EELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG--------------------- 159
Query: 273 XXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTV-GTPDYIAPEVLLKKG 331
W ++ L + GT DY+ PE++ K
Sbjct: 160 -------------------------------WSVHAPSLRRRXMCGTLDYLPPEMIEGKT 188
Query: 332 YGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLIC 391
+ + D W G + YE LVG PPF S T R+IV+ LKFP L+ +KDLI
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVD--LKFP--PFLSDGSKDLIS 244
Query: 392 RLLCDVEHRLGTLGSEQIKAHPWFK 416
+LL H L + + HPW K
Sbjct: 245 KLL--RYHPPQRLPLKGVMEHPWVK 267
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 151/339 (44%), Gaps = 65/339 (19%)
Query: 77 PEEEQINILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAM 136
PEEE + K+ E K+ ++ +++DF++ +G+G FG V L +EK+S I A+
Sbjct: 4 PEEELASKQKNEESKKRQW--------ALEDFEIGRPLGKGKFGNVYLAREKQSKFILAL 55
Query: 137 KKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXX 196
K L K+++ G +R E + + + I++LY F DA +YLI+EY P G V
Sbjct: 56 KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE 115
Query: 197 XXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
YI + A+ H IHRDIKP+NLLL G +K++DFG
Sbjct: 116 LQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----- 170
Query: 257 DCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTV 316
W H +RR +
Sbjct: 171 -------------------------------------WSV------HAPSSRRT---TLC 184
Query: 317 GTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKF 376
GT DY+ PE++ + + + D WSLG + YE LVG PPF ++ T ++I + F
Sbjct: 185 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--RVEFTF 242
Query: 377 PEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWF 415
P+ +T A+DLI RLL + L ++ HPW
Sbjct: 243 PD--FVTEGARDLISRLLKHNPSQRPML--REVLEHPWI 277
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 152/344 (44%), Gaps = 65/344 (18%)
Query: 72 ASSDVPEEEQINILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSG 131
A + PEEE + K+ E K+ ++ +++DF++ +G+G FG V L +EK+S
Sbjct: 8 APENNPEEELASKQKNEESKKRQW--------ALEDFEIGRPLGKGKFGNVYLAREKQSK 59
Query: 132 NIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGG 191
I A+K L K+++ G +R E + + + I++LY F DA +YLI+EY P G
Sbjct: 60 FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 119
Query: 192 DVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFG 251
V YI + A+ H IHRDIKP+NLLL G +K++DFG
Sbjct: 120 TVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 179
Query: 252 LCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKL 311
W H +RR
Sbjct: 180 ------------------------------------------WSV------HAPSSRRD- 190
Query: 312 AYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWK 371
GT DY+ PE++ + + + D WSLG + YE LVG PPF ++ T ++I +
Sbjct: 191 --DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--R 246
Query: 372 NHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWF 415
FP+ +T A+DLI RLL + L ++ HPW
Sbjct: 247 VEFTFPD--FVTEGARDLISRLLKHNPSQRPML--REVLEHPWI 286
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 145/325 (44%), Gaps = 59/325 (18%)
Query: 93 TEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH 152
T + + K ++DDFD+ +G+G FG V L +EK++ I A+K L KS++ G
Sbjct: 1 TALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 60
Query: 153 VRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYI 212
+R E + + + I+++Y F D + +YL++E+ P G++ + ++
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 120
Query: 213 AQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXX 272
+ A+ H+ IHRDIKP+NLL+ G +K++DFG
Sbjct: 121 EELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG--------------------- 159
Query: 273 XXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTV-GTPDYIAPEVLLKKG 331
W ++ L + GT DY+ PE++ K
Sbjct: 160 -------------------------------WSVHAPSLRRRXMCGTLDYLPPEMIEGKT 188
Query: 332 YGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLIC 391
+ + D W G + YE LVG PPF S T R+IV+ LKFP L+ +KDLI
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVD--LKFP--PFLSDGSKDLIS 244
Query: 392 RLLCDVEHRLGTLGSEQIKAHPWFK 416
+LL H L + + HPW K
Sbjct: 245 KLL--RYHPPQRLPLKGVMEHPWVK 267
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 143/320 (44%), Gaps = 57/320 (17%)
Query: 96 MRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRA 155
M K+ + +++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 156 ERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQS 215
E + + + I++LY F DA +YLI+EY P G V YI +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 216 VLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
A+ H IHRDIKP+NLLL G +K++DFG
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 158
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
W H +RR + GT DY+ PE++ + + +
Sbjct: 159 ------------------WSV------HAPSSRRT---TLCGTLDYLPPEMIEGRMHDEK 191
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
D WSLG + YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLK 247
Query: 396 DVEHRLGTLGSEQIKAHPWF 415
+ L ++ HPW
Sbjct: 248 HNPSQRPML--REVLEHPWI 265
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 145/325 (44%), Gaps = 59/325 (18%)
Query: 93 TEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH 152
T + + K ++DDFD+ +G+G FG V L +EK++ I A+K L KS++ G
Sbjct: 2 TALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 61
Query: 153 VRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYI 212
+R E + + + I+++Y F D + +YL++E+ P G++ + ++
Sbjct: 62 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 121
Query: 213 AQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXX 272
+ A+ H+ IHRDIKP+NLL+ G +K++DFG
Sbjct: 122 EELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG--------------------- 160
Query: 273 XXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTV-GTPDYIAPEVLLKKG 331
W ++ L + GT DY+ PE++ K
Sbjct: 161 -------------------------------WSVHAPSLRRRXMCGTLDYLPPEMIEGKT 189
Query: 332 YGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLIC 391
+ + D W G + YE LVG PPF S T R+IV+ LKFP L+ +KDLI
Sbjct: 190 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVD--LKFP--PFLSDGSKDLIS 245
Query: 392 RLLCDVEHRLGTLGSEQIKAHPWFK 416
+LL H L + + HPW K
Sbjct: 246 KLL--RYHPPQRLPLKGVMEHPWVK 268
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 143/320 (44%), Gaps = 57/320 (17%)
Query: 96 MRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRA 155
M K+ + +++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 156 ERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQS 215
E + + + I++LY F DA +YLI+EY P G V YI +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 216 VLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
A+ H IHRDIKP+NLLL G +K++DFG
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 156
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
W H +RR + GT DY+ PE++ + + +
Sbjct: 157 ------------------WSV------HAPSSRRT---TLCGTLDYLPPEMIEGRMHDEK 189
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
D WSLG + YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLK 245
Query: 396 DVEHRLGTLGSEQIKAHPWF 415
+ L ++ HPW
Sbjct: 246 HNPSQRPML--REVLEHPWI 263
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 145/315 (46%), Gaps = 59/315 (18%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL-LAEV 163
DD+ L +G+GAF VR C +K YA K + ++ +R +H + ER + +
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSAR---DHQKLEREARICRL 86
Query: 164 ASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI 222
H IV+L+ S + + YL+ + + GG++ A I Q + ++ I
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHI 146
Query: 223 HKHNYIHRDIKPDNLLLD---QNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
H+H+ +HRD+KP+NLLL + +KL+DFGL ++
Sbjct: 147 HQHDIVHRDLKPENLLLASKCKGAAVKLADFGL-------------------------AI 181
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWW 339
+V G + Q W + GTP Y++PEVL K YG D W
Sbjct: 182 EVQG----------------EQQAW--------FGFAGTPGYLSPEVLRKDPYGKPVDIW 217
Query: 340 SLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEH 399
+ G I+Y +LVGYPPF+ +D ++I PE +TPEAK+LI ++L +
Sbjct: 218 ACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQML--TIN 275
Query: 400 RLGTLGSEQIKAHPW 414
+ ++Q HPW
Sbjct: 276 PAKRITADQALKHPW 290
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 143/319 (44%), Gaps = 57/319 (17%)
Query: 96 MRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRA 155
M K+ + +++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 156 ERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQS 215
E + + + I++LY F DA +YLI+EY P G V YI +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 216 VLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
A+ H IHRDIKP+NLLL G +K++DFG
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 156
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
W H +RR + GT DY+ PE++ + + +
Sbjct: 157 ------------------WSV------HAPSSRRT---TLCGTLDYLPPEMIEGRMHDEK 189
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
D WSLG + YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLK 245
Query: 396 DVEHRLGTLGSEQIKAHPW 414
+ L ++ HPW
Sbjct: 246 HNPSQRPML--REVLEHPW 262
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 148/322 (45%), Gaps = 66/322 (20%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLK-KSEMLSRGQVEHVRA----ERNLLAE 162
+D +IGRG VR C + +G+ +A+K ++ +E LS Q+E VR E ++L +
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 163 VASHC-IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
VA H I+ L S++ + +++L+ + + G++ R + + A+
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSF 215
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
+H +N +HRD+KP+N+LLD N ++LSDFG L+
Sbjct: 216 LHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLE------------------------ 251
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVL------LKKGYGME 335
P E+L R+L GTP Y+APE+L GYG E
Sbjct: 252 ---------------PGEKL-------RELC----GTPGYLAPEILKCSMDETHPGYGKE 285
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL- 394
D W+ G I++ +L G PPF+ + R I+ + PE + KDLI RLL
Sbjct: 286 VDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQ 345
Query: 395 CDVEHRLGTLGSEQIKAHPWFK 416
D E R L +EQ HP+F+
Sbjct: 346 VDPEAR---LTAEQALQHPFFE 364
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 143/320 (44%), Gaps = 57/320 (17%)
Query: 96 MRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRA 155
M K+ + +++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 156 ERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQS 215
E + + + I++LY F DA +YLI+EY P G+V YI +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL 122
Query: 216 VLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
A+ H IHRDIKP+NLLL G +K++DFG
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 158
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
W H +RR T+ DY+ PE++ + + +
Sbjct: 159 ------------------WSV------HAPSSRRXXLXGTL---DYLPPEMIEGRMHDEK 191
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
D WSLG + YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLK 247
Query: 396 DVEHRLGTLGSEQIKAHPWF 415
+ L ++ HPW
Sbjct: 248 HNPSQRPML--REVLEHPWI 265
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 142/316 (44%), Gaps = 57/316 (18%)
Query: 99 KRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
K+ + +++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 159 LLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLA 218
+ + + I++LY F DA +YLI+EY P G V YI + A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+ H IHRDIKP+NLLL G +K++DFG
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------------------- 154
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
W H +RR + GT DY+ PE++ + + + D
Sbjct: 155 ---------------WSC------HAPSSRRT---TLSGTLDYLPPEMIEGRMHDEKVDL 190
Query: 339 WSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVE 398
WSLG + YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL
Sbjct: 191 WSLGVLCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNP 246
Query: 399 HRLGTLGSEQIKAHPW 414
+ L ++ HPW
Sbjct: 247 SQRPML--REVLEHPW 260
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 141/316 (44%), Gaps = 57/316 (18%)
Query: 99 KRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
K+ + +++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 159 LLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLA 218
+ + + I++LY F DA +YLI+EY P G V YI + A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+ H IHRDIKP+NLLL G +K++DFG
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------------------- 158
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
W H +RR + GT DY+ PE + + + + D
Sbjct: 159 ---------------WSV------HAPSSRRT---TLCGTLDYLPPEXIEGRXHDEKVDL 194
Query: 339 WSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVE 398
WSLG + YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNP 250
Query: 399 HRLGTLGSEQIKAHPW 414
+ L ++ HPW
Sbjct: 251 SQRPXL--REVLEHPW 264
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 142/316 (44%), Gaps = 57/316 (18%)
Query: 99 KRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
K+ + +++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 159 LLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLA 218
+ + + I++LY F DA +YLI+EY P G V YI + A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+ H IHRDIKP+NLLL G +K++DFG
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------------------- 154
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
W H +RR + GT DY+ PE++ + + + D
Sbjct: 155 ---------------WSV------HAPSSRRD---TLCGTLDYLPPEMIEGRMHDEKVDL 190
Query: 339 WSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVE 398
WSLG + YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL
Sbjct: 191 WSLGVLCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNP 246
Query: 399 HRLGTLGSEQIKAHPW 414
+ L ++ HPW
Sbjct: 247 SQRPML--REVLEHPW 260
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 142/319 (44%), Gaps = 57/319 (17%)
Query: 96 MRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRA 155
M K+ + +++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 156 ERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQS 215
E + + + I++LY F DA +YLI+EY P G V YI +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 216 VLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
A+ H IHRDIKP+NLLL G +K++DFG
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 156
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
W H +RR GT DY+ PE++ + + +
Sbjct: 157 ------------------WSV------HAPSSRRX---XLCGTLDYLPPEMIEGRMHDEK 189
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
D WSLG + YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLK 245
Query: 396 DVEHRLGTLGSEQIKAHPW 414
+ L ++ HPW
Sbjct: 246 HNPSQRPML--REVLEHPW 262
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 141/317 (44%), Gaps = 57/317 (17%)
Query: 99 KRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
K+ + +++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 159 LLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLA 218
+ + + I++LY F DA +YLI+EY P G V YI + A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+ H IHRDIKP+NLLL G +K++DFG
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------------------- 158
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
W H +RR GT DY+ PE++ + + + D
Sbjct: 159 ---------------WSV------HAPSSRRT---DLCGTLDYLPPEMIEGRMHDEKVDL 194
Query: 339 WSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVE 398
WSLG + YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNP 250
Query: 399 HRLGTLGSEQIKAHPWF 415
+ L ++ HPW
Sbjct: 251 SQRPML--REVLEHPWI 265
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 141/316 (44%), Gaps = 57/316 (18%)
Query: 99 KRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
K+ + +++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R E
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 159 LLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLA 218
+ + + I++LY F DA +YLI+EY P G V YI + A
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 122
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+ H IHRDIKP+NLLL G +K++DFG
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------------------- 155
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
W H +RR GT DY+ PE++ + + + D
Sbjct: 156 ---------------WSV------HAPSSRRX---XLCGTLDYLPPEMIEGRMHDEKVDL 191
Query: 339 WSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVE 398
WSLG + YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL
Sbjct: 192 WSLGVLCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNP 247
Query: 399 HRLGTLGSEQIKAHPW 414
+ L ++ HPW
Sbjct: 248 SQRPML--REVLEHPW 261
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 143/313 (45%), Gaps = 59/313 (18%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G GA+GEV LC++K + A+K ++K+ +S + E +L + I+KLY
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTS-VSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIK 233
F+D YL+ME GG++ A I Q + + +HKHN +HRD+K
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLK 163
Query: 234 PDNLLL---DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGC 290
P+NLLL +++ +K+ DFGL +
Sbjct: 164 PENLLLESKEKDALIKIVDFGLSAVFE--------------------------------- 190
Query: 291 GRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 350
N++K+ +GT YIAPEVL KK Y +CD WS+G I++ +L
Sbjct: 191 ----------------NQKKMK-ERLGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLA 232
Query: 351 GYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGTLGSEQI 409
GYPPF RK+ K PE ++ AKDLI ++L D + R + ++Q
Sbjct: 233 GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRR---ISAQQA 289
Query: 410 KAHPWFKDIAWDK 422
HPW K++ K
Sbjct: 290 LEHPWIKEMCSKK 302
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 143/319 (44%), Gaps = 57/319 (17%)
Query: 96 MRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRA 155
M K+ + +++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 156 ERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQS 215
E + + + I++LY F DA +YLI+EY P G V YI +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 216 VLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
A+ H IHRDIKP+NLLL G +K+++FG
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFG------------------------ 156
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
W H +RR + GT DY+ PE++ + + +
Sbjct: 157 ------------------WSV------HAPSSRRT---TLCGTLDYLPPEMIEGRMHDEK 189
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
D WSLG + YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLK 245
Query: 396 DVEHRLGTLGSEQIKAHPW 414
+ L ++ HPW
Sbjct: 246 HNPSQRPML--REVLEHPW 262
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 141/316 (44%), Gaps = 57/316 (18%)
Query: 99 KRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
K+ + +++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 159 LLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLA 218
+ + + I++LY F DA +YLI+EY P G V YI + A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+ H IHRDIKP+NLLL G +K++DFG
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------------------- 154
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
W H +RR GT DY+ PE++ + + + D
Sbjct: 155 ---------------WSV------HAPSSRRT---DLCGTLDYLPPEMIEGRMHDEKVDL 190
Query: 339 WSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVE 398
WSLG + YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL
Sbjct: 191 WSLGVLCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNP 246
Query: 399 HRLGTLGSEQIKAHPW 414
+ L ++ HPW
Sbjct: 247 SQRPML--REVLEHPW 260
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 141/316 (44%), Gaps = 57/316 (18%)
Query: 99 KRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
K+ + +++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R E
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 159 LLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLA 218
+ + + I++LY F DA +YLI+EY P G V YI + A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+ H IHRDIKP+NLLL G +K++DFG
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------------------- 153
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
W H +RR GT DY+ PE++ + + + D
Sbjct: 154 ---------------WSV------HAPSSRRT---DLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 339 WSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVE 398
WSLG + YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNP 245
Query: 399 HRLGTLGSEQIKAHPW 414
+ L ++ HPW
Sbjct: 246 SQRPML--REVLEHPW 259
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 139/312 (44%), Gaps = 57/312 (18%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
+++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R E + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
I++LY F DA +YLI+EY P G V YI + A+ H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
IHRDIKP+NLLL G +K++DFG
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFG-------------------------------- 156
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 343
W H +RR + GT DY+ PE++ + + + D WSLG
Sbjct: 157 ----------WSV------HAPSSRRA---ALCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGT 403
+ YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL +
Sbjct: 198 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 253
Query: 404 LGSEQIKAHPWF 415
L ++ HPW
Sbjct: 254 L--REVLEHPWI 263
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 135/291 (46%), Gaps = 54/291 (18%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
++DF + ++G+G+F V + +G A+K + K M G V+ V+ E + ++
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXX-XXXXVARFYIAQSVLAIESIH 223
I++LY F+D+ Y+YL++E G++ AR ++ Q + + +H
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH 129
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
H +HRD+ NLLL +N ++K++DFGL L
Sbjct: 130 SHGILHRDLTLSNLLLTRNMNIKIADFGLATQL--------------------------- 162
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 343
K P E+ Y+ GTP+YI+PE+ + +G+E D WSLG
Sbjct: 163 -----------KMPHEK-----------HYTLCGTPNYISPEIATRSAHGLESDVWSLGC 200
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL 394
+ Y +L+G PPF +D T K+V + + L+ EAKDLI +LL
Sbjct: 201 MFYTLLIGRPPFDTDTVKNTLNKVVLA----DYEMPSFLSIEAKDLIHQLL 247
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 142/317 (44%), Gaps = 57/317 (17%)
Query: 99 KRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
K+ + +++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R E
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 159 LLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLA 218
+ + + I++LY F DA +YLI+EY P G V YI + A
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 122
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+ H IHRDIKP+NLLL G +K+++FG
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIANFG--------------------------- 155
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
W H +RR + GT DY+ PE++ + + + D
Sbjct: 156 ---------------WSV------HAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDL 191
Query: 339 WSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVE 398
WSLG + YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL
Sbjct: 192 WSLGVLCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNP 247
Query: 399 HRLGTLGSEQIKAHPWF 415
+ L ++ HPW
Sbjct: 248 SQRPML--REVLEHPWI 262
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 139/312 (44%), Gaps = 57/312 (18%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
+++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R E + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
I++LY F DA +YLI+EY P G V YI + A+ H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
IHRDIKP+NLLL G +K++DFG
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFG-------------------------------- 153
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 343
W H +RR + GT DY+ PE++ + + + D WSLG
Sbjct: 154 ----------WSV------HAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGT 403
+ YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL +
Sbjct: 195 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 250
Query: 404 LGSEQIKAHPWF 415
L ++ HPW
Sbjct: 251 L--REVLEHPWI 260
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 139/311 (44%), Gaps = 57/311 (18%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
+++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R E + + +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
I++LY F DA +YLI+EY P G V YI + A+ H
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
IHRDIKP+NLLL G +K++DFG
Sbjct: 125 SKRVIHRDIKPENLLLGSAGELKIADFG-------------------------------- 152
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 343
W H +RR + GT DY+ PE++ + + + D WSLG
Sbjct: 153 ----------WSV------HAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 193
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGT 403
+ YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL +
Sbjct: 194 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 249
Query: 404 LGSEQIKAHPW 414
L ++ HPW
Sbjct: 250 L--REVLEHPW 258
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 139/311 (44%), Gaps = 57/311 (18%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
+++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R E + + +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
I++LY F DA +YLI+EY P G V YI + A+ H
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
IHRDIKP+NLLL G +K++DFG
Sbjct: 130 SKRVIHRDIKPENLLLGSAGELKIADFG-------------------------------- 157
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 343
W H +RR + GT DY+ PE++ + + + D WSLG
Sbjct: 158 ----------WSV------HAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 198
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGT 403
+ YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL +
Sbjct: 199 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 254
Query: 404 LGSEQIKAHPW 414
L ++ HPW
Sbjct: 255 L--REVLEHPW 263
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 139/311 (44%), Gaps = 57/311 (18%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
+++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R E + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
I++LY F DA +YLI+EY P G V YI + A+ H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
IHRDIKP+NLLL G +K++DFG
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFG-------------------------------- 153
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 343
W H +RR + GT DY+ PE++ + + + D WSLG
Sbjct: 154 ----------WSV------HAPSSRRA---ALCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGT 403
+ YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL +
Sbjct: 195 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 250
Query: 404 LGSEQIKAHPW 414
L ++ HPW
Sbjct: 251 L--REVLEHPW 259
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 138/312 (44%), Gaps = 57/312 (18%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
+++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R E + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
I++LY F DA +YLI+EY P G V YI + A+ H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
IHRDIKP+NLLL G +K++DFG
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFG-------------------------------- 153
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 343
W H +RR GT DY+ PE++ + + + D WSLG
Sbjct: 154 ----------WSV------HAPSSRRT---DLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGT 403
+ YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL +
Sbjct: 195 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 250
Query: 404 LGSEQIKAHPWF 415
L ++ HPW
Sbjct: 251 L--REVLEHPWI 260
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 138/312 (44%), Gaps = 57/312 (18%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
+++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R E + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
I++LY F DA +YLI+EY P G V YI + A+ H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
IHRDIKP+NLLL G +K++DFG
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFG-------------------------------- 153
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 343
W H +RR GT DY+ PE++ + + + D WSLG
Sbjct: 154 ----------WSV------HAPSSRRT---ELCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGT 403
+ YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL +
Sbjct: 195 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 250
Query: 404 LGSEQIKAHPWF 415
L ++ HPW
Sbjct: 251 L--REVLEHPWI 260
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 138/310 (44%), Gaps = 59/310 (19%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
F + ++G GAF EV L +++ +G ++A+K +KKS +E+ E +L ++
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLEN---EIAVLKKIKHEN 67
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNY 227
IV L ++ + YL+M+ + GG++ A I Q + A++ +H++
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGI 127
Query: 228 IHRDIKPDNLLL---DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+HRD+KP+NLL ++N + ++DFGL K M+ +G
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLSK------------------------MEQNG- 162
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
+ + GTP Y+APEVL +K Y D WS+G I
Sbjct: 163 --------------------------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 196
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTL 404
Y +L GYPPFY + KI + P ++ AKD IC LL + T
Sbjct: 197 TYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYT- 255
Query: 405 GSEQIKAHPW 414
E+ +HPW
Sbjct: 256 -CEKALSHPW 264
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 139/319 (43%), Gaps = 58/319 (18%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
F+ +G GAF EV L +EK +G ++A+K + K + +G+ + E +L ++
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL--KGKESSIENEIAVLRKIKHEN 81
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNY 227
IV L ++ +LYL+M+ + GG++ A I Q + A+ +H+
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGI 141
Query: 228 IHRDIKPDNLLL---DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+HRD+KP+NLL D+ + +SDFGL K M+ G
Sbjct: 142 VHRDLKPENLLYYSQDEESKIMISDFGLSK------------------------MEGKGD 177
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
+ C GTP Y+APEVL +K Y D WS+G I
Sbjct: 178 VMSTAC--------------------------GTPGYVAPEVLAQKPYSKAVDCWSIGVI 211
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTL 404
Y +L GYPPFY ++ +I+ + P ++ AKD I L+ ++ T
Sbjct: 212 AYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTC 271
Query: 405 GSEQIKAHPWFK-DIAWDK 422
EQ HPW D A +K
Sbjct: 272 --EQAARHPWIAGDTALNK 288
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 138/311 (44%), Gaps = 57/311 (18%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
+++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R E + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
I++LY F DA +YLI+EY P G V YI + A+ H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
IHRDIKP+NLLL G +K++DFG
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFG-------------------------------- 153
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 343
W H +RR GT DY+ PE++ + + + D WSLG
Sbjct: 154 ----------WSV------HAPSSRRT---XLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGT 403
+ YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL +
Sbjct: 195 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 250
Query: 404 LGSEQIKAHPW 414
L ++ HPW
Sbjct: 251 L--REVLEHPW 259
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 138/311 (44%), Gaps = 57/311 (18%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
+++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R E + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
I++LY F DA +YLI+EY P G V YI + A+ H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
IHRDIKP+NLLL G +K++DFG
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFG-------------------------------- 153
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 343
W H +RR GT DY+ PE++ + + + D WSLG
Sbjct: 154 ----------WSV------HAPSSRRX---XLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGT 403
+ YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL +
Sbjct: 195 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 250
Query: 404 LGSEQIKAHPW 414
L ++ HPW
Sbjct: 251 L--REVLEHPW 259
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 138/311 (44%), Gaps = 57/311 (18%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
+++DF++ +G+G FG V L +EK+S I A+K L K+++ G +R E + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
I++LY F DA +YLI+EY P G V YI + A+ H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
IHRDIKP+NLLL G +K++DFG
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFG-------------------------------- 156
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 343
W H +RR GT DY+ PE++ + + + D WSLG
Sbjct: 157 ----------WSV------HAPSSRRD---DLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGT 403
+ YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL +
Sbjct: 198 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 253
Query: 404 LGSEQIKAHPW 414
L ++ HPW
Sbjct: 254 L--REVLEHPW 262
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 139/313 (44%), Gaps = 56/313 (17%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
D + + +G GA+GEV LC++K +G A+K +KKS + + + E +L ++
Sbjct: 4 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 63
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
I+KLY F+D YL+ME GG++ A + Q + +HKH
Sbjct: 64 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH 123
Query: 226 NYIHRDIKPDNLLLD---QNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
N +HRD+KP+NLLL+ ++ +K+ DFGL +V
Sbjct: 124 NIVHRDLKPENLLLESKSRDALIKIVDFGLS-----------------------AHFEVG 160
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 342
G+ E +GT YIAPEVL KK Y +CD WS G
Sbjct: 161 GKMKER---------------------------LGTAYYIAPEVLRKK-YDEKCDVWSCG 192
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLG 402
I+Y +L GYPPF +++ K P+ +++ EAK L+ +L +
Sbjct: 193 VILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSK-- 250
Query: 403 TLGSEQIKAHPWF 415
+ +E+ HPW
Sbjct: 251 RISAEEALNHPWI 263
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 142/316 (44%), Gaps = 59/316 (18%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL-LAEV 163
D++ L +G+GAF VR C + +G YA K + ++ +R +H + ER + +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSAR---DHQKLEREARICRL 59
Query: 164 ASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI 222
H IV+L+ S + + YL+ + + GG++ A I Q + ++
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 223 HKHNYIHRDIKPDNLLL---DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
H + +HRD+KP+NLLL + +KL+DFGL ++
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGL-------------------------AI 154
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWW 339
+V G Q W + GTP Y++PEVL K YG D W
Sbjct: 155 EVQG----------------DQQAW--------FGFAGTPGYLSPEVLRKDPYGKPVDMW 190
Query: 340 SLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEH 399
+ G I+Y +LVGYPPF+ +D ++I PE +TPEAKDLI ++L +
Sbjct: 191 ACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLT-INP 249
Query: 400 RLGTLGSEQIKAHPWF 415
SE +K HPW
Sbjct: 250 AKRITASEALK-HPWI 264
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 139/313 (44%), Gaps = 56/313 (17%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
D + + +G GA+GEV LC++K +G A+K +KKS + + + E +L ++
Sbjct: 21 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 80
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
I+KLY F+D YL+ME GG++ A + Q + +HKH
Sbjct: 81 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH 140
Query: 226 NYIHRDIKPDNLLLD---QNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
N +HRD+KP+NLLL+ ++ +K+ DFGL +V
Sbjct: 141 NIVHRDLKPENLLLESKSRDALIKIVDFGLS-----------------------AHFEVG 177
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 342
G+ E +GT YIAPEVL KK Y +CD WS G
Sbjct: 178 GKMKER---------------------------LGTAYYIAPEVLRKK-YDEKCDVWSCG 209
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLG 402
I+Y +L GYPPF +++ K P+ +++ EAK L+ +L +
Sbjct: 210 VILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSK-- 267
Query: 403 TLGSEQIKAHPWF 415
+ +E+ HPW
Sbjct: 268 RISAEEALNHPWI 280
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 143/316 (45%), Gaps = 59/316 (18%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL-LAEV 163
D++ L +G+GAF VR C + +G YA K + ++ +R +H + ER + +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSAR---DHQKLEREARICRL 59
Query: 164 ASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI 222
H IV+L+ S + + YL+ + + GG++ A I Q + ++
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 223 HKHNYIHRDIKPDNLLL---DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
H + +HRD+KP+NLLL + +KL+DFGL ++
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGL-------------------------AI 154
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWW 339
+V G Q W + GTP Y++PEVL K YG D W
Sbjct: 155 EVQG----------------DQQAW--------FGFAGTPGYLSPEVLRKDPYGKPVDMW 190
Query: 340 SLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEH 399
+ G I+Y +LVGYPPF+ +D ++I PE +TPEAKDLI ++L
Sbjct: 191 ACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPA 250
Query: 400 RLGTLGSEQIKAHPWF 415
+ T SE +K HPW
Sbjct: 251 KRIT-ASEALK-HPWI 264
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 138/311 (44%), Gaps = 57/311 (18%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
+++DF++ +G+G FG V L +EK S I A+K L K+++ G +R E + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
I++LY F D+ +YLI+EY P G V YI + A+ H
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
IHRDIKP+NLLL G +K++DFG
Sbjct: 126 SKKVIHRDIKPENLLLGSAGELKIADFG-------------------------------- 153
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 343
W H +RR + GT DY+ PE++ + + + D WSLG
Sbjct: 154 ----------WSV------HAPSSRRA---ALCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGT 403
+ YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL +
Sbjct: 195 LCYEFLVGKPPFEANTYQDTYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 250
Query: 404 LGSEQIKAHPW 414
L ++ HPW
Sbjct: 251 L--REVLEHPW 259
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 138/311 (44%), Gaps = 57/311 (18%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
+++DF++ +G+G FG V L +EK+ I A+K L K+++ G +R E + + +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
I++LY F DA +YLI+EY P G V YI + A+ H
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
IHRDIKP+NLLL G +K++DFG
Sbjct: 123 SKRVIHRDIKPENLLLGSAGELKIADFG-------------------------------- 150
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 343
W H +RR + GT DY+ PE++ + + + D WSLG
Sbjct: 151 ----------WSV------HAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 191
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGT 403
+ YE LVG PPF ++ T ++I + FP+ +T A+DLI RLL +
Sbjct: 192 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 247
Query: 404 LGSEQIKAHPW 414
L ++ HPW
Sbjct: 248 L--REVLEHPW 256
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 145/331 (43%), Gaps = 60/331 (18%)
Query: 97 RLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAE 156
R K+ + D +D ++G GAF EV L ++K++ + A+K + K + G+ + E
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL--EGKEGSMENE 66
Query: 157 RNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSV 216
+L ++ IV L ++ +LYLIM+ + GG++ A I Q +
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL 126
Query: 217 LAIESIHKHNYIHRDIKPDNLL---LDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXX 273
A++ +H +HRD+KP+NLL LD++ + +SDFGL K
Sbjct: 127 DAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK------------------- 167
Query: 274 XXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYG 333
M+ G + C GTP Y+APEVL +K Y
Sbjct: 168 -----MEDPGSVLSTAC--------------------------GTPGYVAPEVLAQKPYS 196
Query: 334 MECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRL 393
D WS+G I Y +L GYPPFY ++ +I+ + P ++ AKD I L
Sbjct: 197 KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHL 256
Query: 394 L-CDVEHRLGTLGSEQIKAHPWFK-DIAWDK 422
+ D E R EQ HPW D A DK
Sbjct: 257 MEKDPEKRFTC---EQALQHPWIAGDTALDK 284
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 145/331 (43%), Gaps = 60/331 (18%)
Query: 97 RLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAE 156
R K+ + D +D ++G GAF EV L ++K++ + A+K + K + G+ + E
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--EGKEGSMENE 66
Query: 157 RNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSV 216
+L ++ IV L ++ +LYLIM+ + GG++ A I Q +
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL 126
Query: 217 LAIESIHKHNYIHRDIKPDNLL---LDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXX 273
A++ +H +HRD+KP+NLL LD++ + +SDFGL K
Sbjct: 127 DAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK------------------- 167
Query: 274 XXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYG 333
M+ G + C GTP Y+APEVL +K Y
Sbjct: 168 -----MEDPGSVLSTAC--------------------------GTPGYVAPEVLAQKPYS 196
Query: 334 MECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRL 393
D WS+G I Y +L GYPPFY ++ +I+ + P ++ AKD I L
Sbjct: 197 KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHL 256
Query: 394 L-CDVEHRLGTLGSEQIKAHPWFK-DIAWDK 422
+ D E R EQ HPW D A DK
Sbjct: 257 MEKDPEKRFTC---EQALQHPWIAGDTALDK 284
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 145/331 (43%), Gaps = 60/331 (18%)
Query: 97 RLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAE 156
R K+ + D +D ++G GAF EV L ++K++ + A+K + K + G+ + E
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--EGKEGSMENE 66
Query: 157 RNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSV 216
+L ++ IV L ++ +LYLIM+ + GG++ A I Q +
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL 126
Query: 217 LAIESIHKHNYIHRDIKPDNLL---LDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXX 273
A++ +H +HRD+KP+NLL LD++ + +SDFGL K
Sbjct: 127 DAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK------------------- 167
Query: 274 XXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYG 333
M+ G + C GTP Y+APEVL +K Y
Sbjct: 168 -----MEDPGSVLSTAC--------------------------GTPGYVAPEVLAQKPYS 196
Query: 334 MECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRL 393
D WS+G I Y +L GYPPFY ++ +I+ + P ++ AKD I L
Sbjct: 197 KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHL 256
Query: 394 L-CDVEHRLGTLGSEQIKAHPWFK-DIAWDK 422
+ D E R EQ HPW D A DK
Sbjct: 257 MEKDPEKRFTC---EQALQHPWIAGDTALDK 284
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 145/331 (43%), Gaps = 60/331 (18%)
Query: 97 RLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAE 156
R K+ + D +D ++G GAF EV L ++K++ + A+K + K + G+ + E
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--EGKEGSMENE 66
Query: 157 RNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSV 216
+L ++ IV L ++ +LYLIM+ + GG++ A I Q +
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL 126
Query: 217 LAIESIHKHNYIHRDIKPDNLL---LDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXX 273
A++ +H +HRD+KP+NLL LD++ + +SDFGL K
Sbjct: 127 DAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK------------------- 167
Query: 274 XXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYG 333
M+ G + C GTP Y+APEVL +K Y
Sbjct: 168 -----MEDPGSVLSTAC--------------------------GTPGYVAPEVLAQKPYS 196
Query: 334 MECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRL 393
D WS+G I Y +L GYPPFY ++ +I+ + P ++ AKD I L
Sbjct: 197 KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHL 256
Query: 394 L-CDVEHRLGTLGSEQIKAHPWFK-DIAWDK 422
+ D E R EQ HPW D A DK
Sbjct: 257 MEKDPEKRFTC---EQALQHPWIAGDTALDK 284
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 144/321 (44%), Gaps = 62/321 (19%)
Query: 98 LKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAER 157
L RH ++DDF++ +G+G FG V L +EKKS I A+K L KS++ G +R E
Sbjct: 16 LTRH-FTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREI 74
Query: 158 NLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL 217
+ A + I++LY F D +YLI+EY P G++ + +
Sbjct: 75 EIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELAD 134
Query: 218 AIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXX 277
A+ H IHRDIKP+NLLL G +K++DFG
Sbjct: 135 ALMYCHGKKVIHRDIKPENLLLGLKGELKIADFG-------------------------- 168
Query: 278 SMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTV-GTPDYIAPEVLLKKGYGMEC 336
W ++ L T+ GT DY+ PE++ + + +
Sbjct: 169 --------------------------WSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKV 202
Query: 337 DWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCD 396
D W +G + YE+LVG PPF S T R+IV K LKFP A + A+DLI +LL
Sbjct: 203 DLWCIGVLCYELLVGNPPFESASHNETYRRIV--KVDLKFP--ASVPTGAQDLISKLL-- 256
Query: 397 VEHRLG-TLGSEQIKAHPWFK 416
H L Q+ AHPW +
Sbjct: 257 -RHNPSERLPLAQVSAHPWVR 276
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 133/288 (46%), Gaps = 54/288 (18%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLY 172
++G+G+FGEV LC++K +G A+K + K ++ + E + E LL ++ I+KLY
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 173 YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDI 232
F+D Y YL+ E GG++ A I Q + I +HK+ +HRD+
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 175
Query: 233 KPDNLLLD---QNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESG 289
KP+NLLL+ ++ ++++ DFGL
Sbjct: 176 KPENLLLESKSKDANIRIIDFGLS------------------------------------ 199
Query: 290 CGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 349
H++ +++ +GT YIAPEV L Y +CD WS G I+Y +L
Sbjct: 200 ------------THFEASKK--MKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILL 244
Query: 350 VGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDV 397
G PPF + +K+ K + P+ +++ AKDLI ++L V
Sbjct: 245 SGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYV 292
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 133/288 (46%), Gaps = 54/288 (18%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLY 172
++G+G+FGEV LC++K +G A+K + K ++ + E + E LL ++ I+KLY
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 173 YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDI 232
F+D Y YL+ E GG++ A I Q + I +HK+ +HRD+
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 152
Query: 233 KPDNLLLD---QNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESG 289
KP+NLLL+ ++ ++++ DFGL
Sbjct: 153 KPENLLLESKSKDANIRIIDFGLS------------------------------------ 176
Query: 290 CGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 349
H++ +++ +GT YIAPEV L Y +CD WS G I+Y +L
Sbjct: 177 ------------THFEASKK--MKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILL 221
Query: 350 VGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDV 397
G PPF + +K+ K + P+ +++ AKDLI ++L V
Sbjct: 222 SGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYV 269
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 133/288 (46%), Gaps = 54/288 (18%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLY 172
++G+G+FGEV LC++K +G A+K + K ++ + E + E LL ++ I+KLY
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 173 YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDI 232
F+D Y YL+ E GG++ A I Q + I +HK+ +HRD+
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 176
Query: 233 KPDNLLLD---QNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESG 289
KP+NLLL+ ++ ++++ DFGL
Sbjct: 177 KPENLLLESKSKDANIRIIDFGLS------------------------------------ 200
Query: 290 CGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 349
H++ +++ +GT YIAPEV L Y +CD WS G I+Y +L
Sbjct: 201 ------------THFEASKK--MKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILL 245
Query: 350 VGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDV 397
G PPF + +K+ K + P+ +++ AKDLI ++L V
Sbjct: 246 SGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYV 293
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 143/315 (45%), Gaps = 59/315 (18%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL-LAEV 163
D++ L IG+GAF VR C + +G+ YA K + ++ +R +H + ER + +
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSAR---DHQKLEREARICRL 59
Query: 164 ASHC-IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI 222
H IV+L+ S + + YL+ + + GG++ A I Q + A+
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC 119
Query: 223 HKHNYIHRDIKPDNLLLD---QNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
H+ +HRD+KP+NLLL + +KL+DFGL ++
Sbjct: 120 HQMGVVHRDLKPENLLLASKCKGAAVKLADFGL-------------------------AI 154
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWW 339
+V G Q W + GTP Y++PEVL K+ YG D W
Sbjct: 155 EVQG----------------DQQAW--------FGFAGTPGYLSPEVLRKEAYGKPVDIW 190
Query: 340 SLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEH 399
+ G I+Y +LVGYPPF+ +D ++I PE +TPEAK+LI ++L +
Sbjct: 191 ACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQML-TINP 249
Query: 400 RLGTLGSEQIKAHPW 414
E +K HPW
Sbjct: 250 AKRITAHEALK-HPW 263
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 144/312 (46%), Gaps = 57/312 (18%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
++++ ++G+G+FGEV C+++ + YA+K + K+ ++ +R E LL ++
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDHPN 82
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNY 227
I+KL+ +D+ Y++ E GG++ A I Q I +HKHN
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 228 IHRDIKPDNLLL---DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+HRD+KP+N+LL +++ +K+ DFGL
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGL-------------------------------- 170
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
S C + Q+ ++ R +GT YIAPEV L+ Y +CD WS G I
Sbjct: 171 ---STCFQ---------QNTKMKDR------IGTAYYIAPEV-LRGTYDEKCDVWSAGVI 211
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTL 404
+Y +L G PPFY + +++ K P+ ++ +AKDLI ++L H +
Sbjct: 212 LYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML--TFHPSLRI 269
Query: 405 GSEQIKAHPWFK 416
+ Q HPW +
Sbjct: 270 TATQCLEHPWIQ 281
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 143/313 (45%), Gaps = 59/313 (18%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL-LAEVASH 166
+ L +G+GAF VR C + +G YA K + ++ +R +H + ER + + H
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSAR---DHQKLEREARICRLLKH 80
Query: 167 -CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
IV+L+ S + + YLI + + GG++ A I Q + A+ H+
Sbjct: 81 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 140
Query: 226 NYIHRDIKPDNLLLD---QNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
+HRD+KP+NLLL + +KL+DFGL +++V+
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGL-------------------------AIEVE 175
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 342
G + Q W + GTP Y++PEVL K YG D W+ G
Sbjct: 176 G----------------EQQAW--------FGFAGTPGYLSPEVLRKDPYGKPVDLWACG 211
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLG 402
I+Y +LVGYPPF+ +D ++I PE +TPEAKDLI ++L +
Sbjct: 212 VILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRI 271
Query: 403 TLGSEQIKAHPWF 415
T +E +K HPW
Sbjct: 272 T-AAEALK-HPWI 282
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 133/288 (46%), Gaps = 54/288 (18%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLY 172
++G+G+FGEV LC++K +G A+K + K ++ + E + E LL ++ I+KLY
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 173 YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDI 232
F+D Y YL+ E GG++ A I Q + I +HK+ +HRD+
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 158
Query: 233 KPDNLLLD---QNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESG 289
KP+NLLL+ ++ ++++ DFGL
Sbjct: 159 KPENLLLESKSKDANIRIIDFGLS------------------------------------ 182
Query: 290 CGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 349
H++ +++ +GT YIAPEV L Y +CD WS G I+Y +L
Sbjct: 183 ------------THFEASKK--MKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILL 227
Query: 350 VGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDV 397
G PPF + +K+ K + P+ +++ AKDLI ++L V
Sbjct: 228 SGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYV 275
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 129/286 (45%), Gaps = 54/286 (18%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLY 172
++G+G+FGEV LC++K +G A+K + K ++ + E + E LL ++ I KLY
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 173 YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDI 232
F+D Y YL+ E GG++ A I Q + I HK+ +HRD+
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDL 152
Query: 233 KPDNLLLD---QNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESG 289
KP+NLLL+ ++ ++++ DFGL
Sbjct: 153 KPENLLLESKSKDANIRIIDFGLS------------------------------------ 176
Query: 290 CGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 349
H++ +++ +GT YIAPEV L Y +CD WS G I+Y +L
Sbjct: 177 ------------THFEASKK--XKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILL 221
Query: 350 VGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
G PPF + +K+ K + P+ +++ AKDLI + L
Sbjct: 222 SGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLT 267
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 144/312 (46%), Gaps = 57/312 (18%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
++++ ++G+G+FGEV C+++ + YA+K + K+ ++ +R E LL ++
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDHPN 82
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNY 227
I+KL+ +D+ Y++ E GG++ A I Q I +HKHN
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 228 IHRDIKPDNLLL---DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+HRD+KP+N+LL +++ +K+ DFGL
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGL-------------------------------- 170
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
S C + Q+ ++ R +GT YIAPEV L+ Y +CD WS G I
Sbjct: 171 ---STCFQ---------QNTKMKDR------IGTAYYIAPEV-LRGTYDEKCDVWSAGVI 211
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTL 404
+Y +L G PPFY + +++ K P+ ++ +AKDLI ++L H +
Sbjct: 212 LYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML--TFHPSLRI 269
Query: 405 GSEQIKAHPWFK 416
+ Q HPW +
Sbjct: 270 TATQCLEHPWIQ 281
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 144/312 (46%), Gaps = 57/312 (18%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
++++ ++G+G+FGEV C+++ + YA+K + K+ ++ +R E LL ++
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDHPN 82
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNY 227
I+KL+ +D+ Y++ E GG++ A I Q I +HKHN
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 228 IHRDIKPDNLLL---DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+HRD+KP+N+LL +++ +K+ DFGL
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGL-------------------------------- 170
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
S C + Q+ ++ R +GT YIAPEV L+ Y +CD WS G I
Sbjct: 171 ---STCFQ---------QNTKMKDR------IGTAYYIAPEV-LRGTYDEKCDVWSAGVI 211
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTL 404
+Y +L G PPFY + +++ K P+ ++ +AKDLI ++L H +
Sbjct: 212 LYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML--TFHPSLRI 269
Query: 405 GSEQIKAHPWFK 416
+ Q HPW +
Sbjct: 270 TATQCLEHPWIQ 281
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 144/316 (45%), Gaps = 59/316 (18%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL-LAEV 163
+++ L +G+GAF VR C + +G YA + ++ +R +H + ER + +
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSAR---DHQKLEREARICRL 66
Query: 164 ASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI 222
H IV+L+ S + + YLI + + GG++ A I Q + A+
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC 126
Query: 223 HKHNYIHRDIKPDNLLLD---QNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
H+ +HR++KP+NLLL + +KL+DFGL ++
Sbjct: 127 HQMGVVHRNLKPENLLLASKLKGAAVKLADFGL-------------------------AI 161
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWW 339
+V+G + Q W + GTP Y++PEVL K YG D W
Sbjct: 162 EVEG----------------EQQAW--------FGFAGTPGYLSPEVLRKDPYGKPVDLW 197
Query: 340 SLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEH 399
+ G I+Y +LVGYPPF+ +D ++I PE +TPEAKDLI ++L
Sbjct: 198 ACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPS 257
Query: 400 RLGTLGSEQIKAHPWF 415
+ T +E +K HPW
Sbjct: 258 KRIT-AAEALK-HPWI 271
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 155/348 (44%), Gaps = 73/348 (20%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVE-----HVRAERNLL 160
D++ + +G GA GEV+L E+K+ A+K + K + E +V E +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 161 AEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIE 220
++ CI+K+ +F DAE Y+++E + GG++ + Y Q +LA++
Sbjct: 70 KKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 221 SIHKHNYIHRDIKPDNLLL---DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXX 277
+H++ IHRD+KP+N+LL +++ +K++DFG K L T+L
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---------------- 172
Query: 278 SMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK---KGYGM 334
+ GTP Y+APEVL+ GY
Sbjct: 173 ----------------------------------MRTLCGTPTYLAPEVLVSVGTAGYNR 198
Query: 335 ECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEE-ARLTPEAKDLICRL 393
D WSLG I++ L GYPPF + + + + PE A ++ +A DL+ +L
Sbjct: 199 AVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKL 258
Query: 394 L-CDVEHRLGTLGSEQIKAHPWFKDIAWDKLY------EMEAAYKPEV 434
L D + R T E+ HPW +D + + E E+ KP+V
Sbjct: 259 LVVDPKARFTT---EEALRHPWLQDEDMKRKFQDLLSEENESTAKPQV 303
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 146/325 (44%), Gaps = 67/325 (20%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVE-----HVRAERNLL 160
D++ + +G GA GEV+L E+K+ A+K + K + E +V E +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 161 AEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIE 220
++ CI+K+ +F DAE Y+++E + GG++ + Y Q +LA++
Sbjct: 70 KKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 221 SIHKHNYIHRDIKPDNLLL---DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXX 277
+H++ IHRD+KP+N+LL +++ +K++DFG K L T+L
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---------------- 172
Query: 278 SMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK---KGYGM 334
+ GTP Y+APEVL+ GY
Sbjct: 173 ----------------------------------MRTLCGTPTYLAPEVLVSVGTAGYNR 198
Query: 335 ECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEE-ARLTPEAKDLICRL 393
D WSLG I++ L GYPPF + + + + PE A ++ +A DL+ +L
Sbjct: 199 AVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKL 258
Query: 394 L-CDVEHRLGTLGSEQIKAHPWFKD 417
L D + R T E+ HPW +D
Sbjct: 259 LVVDPKARFTT---EEALRHPWLQD 280
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 146/325 (44%), Gaps = 67/325 (20%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVE-----HVRAERNLL 160
D++ + +G GA GEV+L E+K+ A+K + K + E +V E +L
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 161 AEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIE 220
++ CI+K+ +F DAE Y+++E + GG++ + Y Q +LA++
Sbjct: 69 KKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 127
Query: 221 SIHKHNYIHRDIKPDNLLL---DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXX 277
+H++ IHRD+KP+N+LL +++ +K++DFG K L T+L
Sbjct: 128 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---------------- 171
Query: 278 SMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK---KGYGM 334
+ GTP Y+APEVL+ GY
Sbjct: 172 ----------------------------------MRTLCGTPTYLAPEVLVSVGTAGYNR 197
Query: 335 ECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEE-ARLTPEAKDLICRL 393
D WSLG I++ L GYPPF + + + + PE A ++ +A DL+ +L
Sbjct: 198 AVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKL 257
Query: 394 L-CDVEHRLGTLGSEQIKAHPWFKD 417
L D + R T E+ HPW +D
Sbjct: 258 LVVDPKARFTT---EEALRHPWLQD 279
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 146/325 (44%), Gaps = 67/325 (20%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVE-----HVRAERNLL 160
D++ + +G GA GEV+L E+K+ A+K + K + E +V E +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 161 AEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIE 220
++ CI+K+ +F DAE Y+++E + GG++ + Y Q +LA++
Sbjct: 70 KKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 221 SIHKHNYIHRDIKPDNLLL---DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXX 277
+H++ IHRD+KP+N+LL +++ +K++DFG K L T+L
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---------------- 172
Query: 278 SMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK---KGYGM 334
+ GTP Y+APEVL+ GY
Sbjct: 173 ----------------------------------MRTLCGTPTYLAPEVLVSVGTAGYNR 198
Query: 335 ECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEE-ARLTPEAKDLICRL 393
D WSLG I++ L GYPPF + + + + PE A ++ +A DL+ +L
Sbjct: 199 AVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKL 258
Query: 394 L-CDVEHRLGTLGSEQIKAHPWFKD 417
L D + R T E+ HPW +D
Sbjct: 259 LVVDPKARFTT---EEALRHPWLQD 280
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 146/325 (44%), Gaps = 67/325 (20%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVE-----HVRAERNLL 160
D++ + +G GA GEV+L E+K+ A+K + K + E +V E +L
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 161 AEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIE 220
++ CI+K+ +F DAE Y+++E + GG++ + Y Q +LA++
Sbjct: 76 KKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 134
Query: 221 SIHKHNYIHRDIKPDNLLL---DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXX 277
+H++ IHRD+KP+N+LL +++ +K++DFG K L T+L
Sbjct: 135 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---------------- 178
Query: 278 SMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK---KGYGM 334
+ GTP Y+APEVL+ GY
Sbjct: 179 ----------------------------------MRTLCGTPTYLAPEVLVSVGTAGYNR 204
Query: 335 ECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEE-ARLTPEAKDLICRL 393
D WSLG I++ L GYPPF + + + + PE A ++ +A DL+ +L
Sbjct: 205 AVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKL 264
Query: 394 L-CDVEHRLGTLGSEQIKAHPWFKD 417
L D + R T E+ HPW +D
Sbjct: 265 LVVDPKARFTT---EEALRHPWLQD 286
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 148/337 (43%), Gaps = 75/337 (22%)
Query: 99 KRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMK-----KLKKSEMLSRGQVEHV 153
KRH + + + +G G+FG+V+L K+ A+K LKKS+M H+
Sbjct: 5 KRH---IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDM-------HM 54
Query: 154 RAERNL--LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY 211
R ER + L + I+KLY + +++EY GG++ R +
Sbjct: 55 RVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRF 113
Query: 212 IAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXX 271
Q + AIE H+H +HRD+KP+NLLLD N ++K++DFGL +
Sbjct: 114 FQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM--------------- 158
Query: 272 XXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKG 331
DG F ++ C G+P+Y APEV+ K
Sbjct: 159 ---------TDGNFLKTSC--------------------------GSPNYAAPEVINGKL 183
Query: 332 Y-GMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLI 390
Y G E D WS G ++Y MLVG PF D+ + K V N + L+P A+ LI
Sbjct: 184 YAGPEVDVWSCGIVLYVMLVGRLPF-DDEFIPNLFKKV---NSCVYVMPDFLSPGAQSLI 239
Query: 391 CRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEME 427
R++ V + + ++I+ PWF D L ME
Sbjct: 240 RRMI--VADPMQRITIQEIRRDPWFNVNLPDYLRPME 274
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 146/325 (44%), Gaps = 67/325 (20%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVE-----HVRAERNLL 160
D++ + +G GA GEV+L E+K+ A++ + K + E +V E +L
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 161 AEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIE 220
++ CI+K+ +F DAE Y+++E + GG++ + Y Q +LA++
Sbjct: 209 KKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 267
Query: 221 SIHKHNYIHRDIKPDNLLL---DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXX 277
+H++ IHRD+KP+N+LL +++ +K++DFG K L T+L
Sbjct: 268 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---------------- 311
Query: 278 SMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK---KGYGM 334
+ GTP Y+APEVL+ GY
Sbjct: 312 ----------------------------------MRTLCGTPTYLAPEVLVSVGTAGYNR 337
Query: 335 ECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEE-ARLTPEAKDLICRL 393
D WSLG I++ L GYPPF + + + + PE A ++ +A DL+ +L
Sbjct: 338 AVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKL 397
Query: 394 L-CDVEHRLGTLGSEQIKAHPWFKD 417
L D + R T E+ HPW +D
Sbjct: 398 LVVDPKARFTT---EEALRHPWLQD 419
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 135/305 (44%), Gaps = 55/305 (18%)
Query: 93 TEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH 152
+E+M K S D++D+ +G+GAF VR C K +G +A K + ++ +R +
Sbjct: 17 SEFMMNASTKFS-DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQK 74
Query: 153 VRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYI 212
+ E + ++ IV+L+ S Q+ + YL+ + + GG++ A I
Sbjct: 75 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI 134
Query: 213 AQSVLAIESIHKHNYIHRDIKPDNLLL---DQNGHMKLSDFGLCKPLDCTNLSAIXXXXX 269
Q + +I H + +HR++KP+NLLL + +KL+DFGL AI
Sbjct: 135 QQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL----------AI----- 179
Query: 270 XXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK 329
++N + + GTP Y++PEVL K
Sbjct: 180 -----------------------------------EVNDSEAWHGFAGTPGYLSPEVLKK 204
Query: 330 KGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDL 389
Y D W+ G I+Y +LVGYPPF+ +D +I PE +TPEAK L
Sbjct: 205 DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSL 264
Query: 390 ICRLL 394
I +L
Sbjct: 265 IDSML 269
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 146/325 (44%), Gaps = 67/325 (20%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVE-----HVRAERNLL 160
D++ + +G GA GEV+L E+K+ A++ + K + E +V E +L
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 161 AEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIE 220
++ CI+K+ +F DAE Y+++E + GG++ + Y Q +LA++
Sbjct: 195 KKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 253
Query: 221 SIHKHNYIHRDIKPDNLLL---DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXX 277
+H++ IHRD+KP+N+LL +++ +K++DFG K L T+L
Sbjct: 254 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---------------- 297
Query: 278 SMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK---KGYGM 334
+ GTP Y+APEVL+ GY
Sbjct: 298 ----------------------------------MRTLCGTPTYLAPEVLVSVGTAGYNR 323
Query: 335 ECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEE-ARLTPEAKDLICRL 393
D WSLG I++ L GYPPF + + + + PE A ++ +A DL+ +L
Sbjct: 324 AVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKL 383
Query: 394 L-CDVEHRLGTLGSEQIKAHPWFKD 417
L D + R T E+ HPW +D
Sbjct: 384 LVVDPKARFTT---EEALRHPWLQD 405
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 129/292 (44%), Gaps = 54/292 (18%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
D++D+ +G+GAF VR C K +G +A K + ++ +R + + E + ++
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQH 64
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
IV+L+ S Q+ + YL+ + + GG++ A I Q + +I H +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 226 NYIHRDIKPDNLLL---DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
+HR++KP+NLLL + +KL+DFGL AI
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGL----------AI------------------ 156
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 342
++N + + GTP Y++PEVL K Y D W+ G
Sbjct: 157 ----------------------EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACG 194
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL 394
I+Y +LVGYPPF+ +D +I PE +TPEAK LI +L
Sbjct: 195 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSML 246
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 129/292 (44%), Gaps = 54/292 (18%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
D++D+ +G+GAF VR C K +G +A K + ++ +R + + E + ++
Sbjct: 5 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQH 63
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
IV+L+ S Q+ + YL+ + + GG++ A I Q + +I H +
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 123
Query: 226 NYIHRDIKPDNLLL---DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
+HR++KP+NLLL + +KL+DFGL AI
Sbjct: 124 GIVHRNLKPENLLLASKAKGAAVKLADFGL----------AI------------------ 155
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 342
++N + + GTP Y++PEVL K Y D W+ G
Sbjct: 156 ----------------------EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACG 193
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL 394
I+Y +LVGYPPF+ +D +I PE +TPEAK LI +L
Sbjct: 194 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSML 245
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 129/292 (44%), Gaps = 54/292 (18%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
D++D+ +G+GAF VR C K +G +A K + ++ +R + + E + ++
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQH 64
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
IV+L+ S Q+ + YL+ + + GG++ A I Q + +I H +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 226 NYIHRDIKPDNLLL---DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
+HR++KP+NLLL + +KL+DFGL AI
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGL----------AI------------------ 156
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 342
++N + + GTP Y++PEVL K Y D W+ G
Sbjct: 157 ----------------------EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACG 194
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL 394
I+Y +LVGYPPF+ +D +I PE +TPEAK LI +L
Sbjct: 195 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSML 246
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 127/284 (44%), Gaps = 59/284 (20%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G+G F + + + ++A K + KS +L Q E + E ++ +A +V +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIK 233
F+D +++++++E + AR+Y+ Q VL + +H++ IHRD+K
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 234 PDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRR 293
NL L+++ +K+ DFGL ++ DG ++ C
Sbjct: 145 LGNLFLNEDLEVKIGDFGLA-----------------------TKVEYDGERKKTLC--- 178
Query: 294 WKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 353
GTP+YIAPEVL KKG+ E D WS+G IMY +LVG P
Sbjct: 179 -----------------------GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 215
Query: 354 PFYSDDPVTTCRKIVHW---KNHLKFPEEARLTPEAKDLICRLL 394
PF T+C K + KN P+ + P A LI ++L
Sbjct: 216 PFE-----TSCLKETYLRIKKNEYSIPKH--INPVAASLIQKML 252
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 136/317 (42%), Gaps = 65/317 (20%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMK--KLKKSEMLSRGQVEHVR----AERNLLAEVASH 166
I+GRG VR C K + YA+K + S +V+ +R E ++L +V+ H
Sbjct: 24 ILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH 83
Query: 167 -CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
I++L +++ + +L+ + + G++ R + + I ++HK
Sbjct: 84 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL 143
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
N +HRD+KP+N+LLD + ++KL+DFG LD
Sbjct: 144 NIVHRDLKPENILLDDDMNIKLTDFGFSCQLD---------------------------- 175
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVL------LKKGYGMECDWW 339
P E+L+ S GTP Y+APE++ GYG E D W
Sbjct: 176 -----------PGEKLR-----------SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMW 213
Query: 340 SLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEH 399
S G IMY +L G PPF+ + R I+ PE + KDL+ R L
Sbjct: 214 STGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQ 273
Query: 400 RLGTLGSEQIKAHPWFK 416
+ T +E+ AHP+F+
Sbjct: 274 KRYT--AEEALAHPFFQ 288
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 134/316 (42%), Gaps = 63/316 (19%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
D ++L+ IG G FG RL ++K+S + A+K +++ E ++ + R+L
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSL----RH 74
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
IV+ +L ++MEY GG++ ARF+ Q + + H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 226 NYIHRDIKPDNLLLDQNG--HMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
HRD+K +N LLD + +K+ DFG K
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICDFGYSK----------------------------- 165
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLG 342
+ H Q STVGTP YIAPEVLLKK Y G D WS G
Sbjct: 166 ---------------SSVLHSQ------PKSTVGTPAYIAPEVLLKKEYDGKVADVWSCG 204
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKF--PEEARLTPEAKDLICRL-LCDVEH 399
+Y MLVG PF + RK +H ++++ P+ ++PE + LI R+ + D
Sbjct: 205 VTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAK 264
Query: 400 RLGTLGSEQIKAHPWF 415
R+ +I+ H WF
Sbjct: 265 RISI---PEIRNHEWF 277
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 127/284 (44%), Gaps = 59/284 (20%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G+G F + + + ++A K + KS +L Q E + E ++ +A +V +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIK 233
F+D +++++++E + AR+Y+ Q VL + +H++ IHRD+K
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 234 PDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRR 293
NL L+++ +K+ DFGL ++ DG ++ C
Sbjct: 145 LGNLFLNEDLEVKIGDFGLA-----------------------TKVEYDGERKKTLC--- 178
Query: 294 WKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 353
GTP+YIAPEVL KKG+ E D WS+G IMY +LVG P
Sbjct: 179 -----------------------GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 215
Query: 354 PFYSDDPVTTCRKIVHW---KNHLKFPEEARLTPEAKDLICRLL 394
PF T+C K + KN P+ + P A LI ++L
Sbjct: 216 PFE-----TSCLKETYLRIKKNEYSIPKH--INPVAASLIQKML 252
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 133/316 (42%), Gaps = 63/316 (19%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
D ++L+ IG G FG RL ++K+S + A+K +++ E + + R+L
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSL----RH 73
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
IV+ +L ++MEY GG++ ARF+ Q + + H
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 133
Query: 226 NYIHRDIKPDNLLLDQNG--HMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
HRD+K +N LLD + +K+ DFG K
Sbjct: 134 QVCHRDLKLENTLLDGSPAPRLKICDFGYSK----------------------------- 164
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLG 342
+ H Q STVGTP YIAPEVLLKK Y G D WS G
Sbjct: 165 ---------------SSVLHSQ------PKSTVGTPAYIAPEVLLKKEYDGKVADVWSCG 203
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKF--PEEARLTPEAKDLICRL-LCDVEH 399
+Y MLVG PF + RK +H ++++ P+ ++PE + LI R+ + D
Sbjct: 204 VTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAK 263
Query: 400 RLGTLGSEQIKAHPWF 415
R+ +I+ H WF
Sbjct: 264 RISI---PEIRNHEWF 276
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 127/284 (44%), Gaps = 59/284 (20%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G+G F + + + ++A K + KS +L Q E + E ++ +A +V +
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIK 233
F+D +++++++E + AR+Y+ Q VL + +H++ IHRD+K
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 148
Query: 234 PDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRR 293
NL L+++ +K+ DFGL ++ DG ++ C
Sbjct: 149 LGNLFLNEDLEVKIGDFGLA-----------------------TKVEYDGERKKTLC--- 182
Query: 294 WKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 353
GTP+YIAPEVL KKG+ E D WS+G IMY +LVG P
Sbjct: 183 -----------------------GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 219
Query: 354 PFYSDDPVTTCRKIVHW---KNHLKFPEEARLTPEAKDLICRLL 394
PF T+C K + KN P+ + P A LI ++L
Sbjct: 220 PFE-----TSCLKETYLRIKKNEYSIPKH--INPVAASLIQKML 256
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 137/315 (43%), Gaps = 65/315 (20%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
+ L IGRG++GEV++ +K + A KK+ K + V+ + E ++ +
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDHPN 84
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNY 227
I++LY +F+D +YL+ME GG++ A + + A+ HK N
Sbjct: 85 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV 144
Query: 228 IHRDIKPDNLLL---DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
HRD+KP+N L + +KL DFGL R
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLA-----------------------------AR 175
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
F K+ + VGTP Y++P+V L+ YG ECD WS G +
Sbjct: 176 FKPG---------------------KMMRTKVGTPYYVSPQV-LEGLYGPECDEWSAGVM 213
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEE--ARLTPEAKDLICRLLC-DVEHRL 401
MY +L GYPPF + KI + FPE+ ++P+A+ LI RLL + R+
Sbjct: 214 MYVLLCGYPPFSAPTDXEVMLKIR--EGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRI 271
Query: 402 GTLGSEQIKAHPWFK 416
+L Q H WF+
Sbjct: 272 TSL---QALEHEWFE 283
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 137/315 (43%), Gaps = 65/315 (20%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
+ L IGRG++GEV++ +K + A KK+ K + V+ + E ++ +
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDHPN 67
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNY 227
I++LY +F+D +YL+ME GG++ A + + A+ HK N
Sbjct: 68 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV 127
Query: 228 IHRDIKPDNLLL---DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
HRD+KP+N L + +KL DFGL R
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLA-----------------------------AR 158
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
F K+ + VGTP Y++P+V L+ YG ECD WS G +
Sbjct: 159 FKPG---------------------KMMRTKVGTPYYVSPQV-LEGLYGPECDEWSAGVM 196
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEE--ARLTPEAKDLICRLLC-DVEHRL 401
MY +L GYPPF + KI + FPE+ ++P+A+ LI RLL + R+
Sbjct: 197 MYVLLCGYPPFSAPTDXEVMLKIR--EGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRI 254
Query: 402 GTLGSEQIKAHPWFK 416
+L Q H WF+
Sbjct: 255 TSL---QALEHEWFE 266
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 128/284 (45%), Gaps = 59/284 (20%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G+G F + + + ++A K + KS +L Q E + E ++ +A +V +
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIK 233
F+D +++++++E + AR+Y+ Q VL + +H++ IHRD+K
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 166
Query: 234 PDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRR 293
NL L+++ +K+ DFGL ++ DG
Sbjct: 167 LGNLFLNEDLEVKIGDFGLA-----------------------TKVEYDG---------- 193
Query: 294 WKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 353
R+K+ GTP+YIAPEVL KKG+ E D WS+G IMY +LVG P
Sbjct: 194 -------------ERKKV---LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 237
Query: 354 PFYSDDPVTTCRKIVHW---KNHLKFPEEARLTPEAKDLICRLL 394
PF T+C K + KN P+ + P A LI ++L
Sbjct: 238 PFE-----TSCLKETYLRIKKNEYSIPKH--INPVAASLIQKML 274
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 128/284 (45%), Gaps = 59/284 (20%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G+G F + + + ++A K + KS +L Q E + E ++ +A +V +
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIK 233
F+D +++++++E + AR+Y+ Q VL + +H++ IHRD+K
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 168
Query: 234 PDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRR 293
NL L+++ +K+ DFGL ++ DG
Sbjct: 169 LGNLFLNEDLEVKIGDFGLA-----------------------TKVEYDG---------- 195
Query: 294 WKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 353
R+K+ GTP+YIAPEVL KKG+ E D WS+G IMY +LVG P
Sbjct: 196 -------------ERKKV---LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 239
Query: 354 PFYSDDPVTTCRKIVHW---KNHLKFPEEARLTPEAKDLICRLL 394
PF T+C K + KN P+ + P A LI ++L
Sbjct: 240 PFE-----TSCLKETYLRIKKNEYSIPKH--INPVAASLIQKML 276
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 128/284 (45%), Gaps = 59/284 (20%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G+G F + + + ++A K + KS +L Q E + E ++ +A +V +
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIK 233
F+D +++++++E + AR+Y+ Q VL + +H++ IHRD+K
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 142
Query: 234 PDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRR 293
NL L+++ +K+ DFGL ++ DG
Sbjct: 143 LGNLFLNEDLEVKIGDFGLA-----------------------TKVEYDG---------- 169
Query: 294 WKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 353
R+K+ GTP+YIAPEVL KKG+ E D WS+G IMY +LVG P
Sbjct: 170 -------------ERKKV---LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 213
Query: 354 PFYSDDPVTTCRKIVHW---KNHLKFPEEARLTPEAKDLICRLL 394
PF T+C K + KN P+ + P A LI ++L
Sbjct: 214 PFE-----TSCLKETYLRIKKNEYSIPKH--INPVAASLIQKML 250
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 135/317 (42%), Gaps = 65/317 (20%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMK--KLKKSEMLSRGQVEHVR----AERNLLAEVASH 166
I+GRG VR C K + YA+K + S +V+ +R E ++L +V+ H
Sbjct: 11 ILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH 70
Query: 167 -CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
I++L +++ + +L+ + + G++ R + + I ++HK
Sbjct: 71 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL 130
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
N +HRD+KP+N+LLD + ++KL+DFG LD
Sbjct: 131 NIVHRDLKPENILLDDDMNIKLTDFGFSCQLD---------------------------- 162
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVL------LKKGYGMECDWW 339
P E+L+ GTP Y+APE++ GYG E D W
Sbjct: 163 -----------PGEKLRE-----------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMW 200
Query: 340 SLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEH 399
S G IMY +L G PPF+ + R I+ PE + KDL+ R L
Sbjct: 201 STGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQ 260
Query: 400 RLGTLGSEQIKAHPWFK 416
+ T +E+ AHP+F+
Sbjct: 261 KRYT--AEEALAHPFFQ 275
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 135/317 (42%), Gaps = 65/317 (20%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMK--KLKKSEMLSRGQVEHVR----AERNLLAEVASH 166
I+GRG VR C K + YA+K + S +V+ +R E ++L +V+ H
Sbjct: 24 ILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH 83
Query: 167 -CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
I++L +++ + +L+ + + G++ R + + I ++HK
Sbjct: 84 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL 143
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
N +HRD+KP+N+LLD + ++KL+DFG LD
Sbjct: 144 NIVHRDLKPENILLDDDMNIKLTDFGFSCQLD---------------------------- 175
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVL------LKKGYGMECDWW 339
P E+L+ GTP Y+APE++ GYG E D W
Sbjct: 176 -----------PGEKLR-----------EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMW 213
Query: 340 SLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEH 399
S G IMY +L G PPF+ + R I+ PE + KDL+ R L
Sbjct: 214 STGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQ 273
Query: 400 RLGTLGSEQIKAHPWFK 416
+ T +E+ AHP+F+
Sbjct: 274 KRYT--AEEALAHPFFQ 288
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 135/303 (44%), Gaps = 58/303 (19%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG G+ G V L +EK SG A+K + + R E + E ++ + +V++Y
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRR---ELLFNEVVIMRDYQHFNVVEMYK 109
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-AIESIHKHNYIHRDI 232
S+ E L+++ME+L GG + +A + ++VL A+ +H IHRDI
Sbjct: 110 SYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIAT--VCEAVLQALAYLHAQGVIHRDI 167
Query: 233 KPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGR 292
K D++LL +G +KLSDFG C + S DV R
Sbjct: 168 KSDSILLTLDGRVKLSDFGFCAQI---------------------SKDVPKR-------- 198
Query: 293 RWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGY 352
VGTP ++APEV+ + Y E D WSLG ++ EM+ G
Sbjct: 199 --------------------KXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
Query: 353 PPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAH 412
PP++SD PV +++ K +++P +D + R+L T ++++ H
Sbjct: 239 PPYFSDSPVQAMKRLRDSPPP-KLKNSHKVSPVLRDFLERMLVRDPQERAT--AQELLDH 295
Query: 413 PWF 415
P+
Sbjct: 296 PFL 298
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 132/316 (41%), Gaps = 63/316 (19%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
D ++L+ IG G FG RL ++K+S + A+K +++ E + + R+L
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSL----RH 74
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
IV+ +L ++MEY GG++ ARF+ Q + + H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 226 NYIHRDIKPDNLLLDQNG--HMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
HRD+K +N LLD + +K+ FG K
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSK----------------------------- 165
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLG 342
+ H Q STVGTP YIAPEVLLKK Y G D WS G
Sbjct: 166 ---------------SSVLHSQ------PKSTVGTPAYIAPEVLLKKEYDGKVADVWSCG 204
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKF--PEEARLTPEAKDLICRL-LCDVEH 399
+Y MLVG PF + RK +H ++++ P+ ++PE + LI R+ + D
Sbjct: 205 VTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAK 264
Query: 400 RLGTLGSEQIKAHPWF 415
R+ +I+ H WF
Sbjct: 265 RISI---PEIRNHEWF 277
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 124/285 (43%), Gaps = 59/285 (20%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLY 172
+G+G F + + + ++A K + KS +L Q E + E + + + +V +
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 173 YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDI 232
F+D +++Y+++E + AR+++ Q++ ++ +H + IHRD+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 233 KPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGR 292
K NL L+ + +K+ DFGL ++ DG ++ CG
Sbjct: 169 KLGNLFLNDDMDVKIGDFGLA-----------------------TKIEFDGERKKTLCG- 204
Query: 293 RWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGY 352
TP+YIAPEVL KKG+ E D WSLG I+Y +LVG
Sbjct: 205 -------------------------TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
Query: 353 PPFYSDDPVTTCRKIVHW---KNHLKFPEEARLTPEAKDLICRLL 394
PPF T+C K + KN P + P A LI R+L
Sbjct: 240 PPFE-----TSCLKETYIRIKKNEYSVPRH--INPVASALIRRML 277
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 139/330 (42%), Gaps = 57/330 (17%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
++ + + L +G G FG+V++ + + +G+ A+K L + ++ S V +R E L
Sbjct: 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLK 71
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
I+KLY ++++MEY+ GG++ +R Q + ++
Sbjct: 72 LFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDY 131
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H+H +HRD+KP+N+LLD + + K++DFGL +M
Sbjct: 132 CHRHMVVHRDLKPENVLLDAHMNAKIADFGLS------------------------NMMS 167
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWS 340
DG F C G+P+Y APEV+ + Y G E D WS
Sbjct: 168 DGEFLRXSC--------------------------GSPNYAAPEVISGRLYAGPEVDIWS 201
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
G I+Y +L G PF D T +KI F L P L+ +L +
Sbjct: 202 SGVILYALLCGTLPFDDDHVPTLFKKICDG----IFYTPQYLNPSVISLLKHMLQVDPMK 257
Query: 401 LGTLGSEQIKAHPWFKDIAWDKLYEMEAAY 430
T+ + I+ H WFK L+ + +Y
Sbjct: 258 RATI--KDIREHEWFKQDLPKYLFPEDPSY 285
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 123/285 (43%), Gaps = 59/285 (20%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLY 172
+G+G F + + + ++A K + KS +L Q E + E + + + +V +
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 173 YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDI 232
F+D +++Y+++E + AR+++ Q++ ++ +H + IHRD+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 233 KPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGR 292
K NL L+ + +K+ DFGL ++ DG + CG
Sbjct: 169 KLGNLFLNDDMDVKIGDFGLA-----------------------TKIEFDGERKKDLCG- 204
Query: 293 RWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGY 352
TP+YIAPEVL KKG+ E D WSLG I+Y +LVG
Sbjct: 205 -------------------------TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
Query: 353 PPFYSDDPVTTCRKIVHW---KNHLKFPEEARLTPEAKDLICRLL 394
PPF T+C K + KN P + P A LI R+L
Sbjct: 240 PPFE-----TSCLKETYIRIKKNEYSVPRH--INPVASALIRRML 277
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 123/285 (43%), Gaps = 59/285 (20%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLY 172
+G+G F + + + ++A K + KS +L Q E + E + + + +V +
Sbjct: 33 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 92
Query: 173 YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDI 232
F+D +++Y+++E + AR+++ Q++ ++ +H + IHRD+
Sbjct: 93 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 152
Query: 233 KPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGR 292
K NL L+ + +K+ DFGL ++ DG + CG
Sbjct: 153 KLGNLFLNDDMDVKIGDFGLA-----------------------TKIEFDGERKKDLCG- 188
Query: 293 RWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGY 352
TP+YIAPEVL KKG+ E D WSLG I+Y +LVG
Sbjct: 189 -------------------------TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
Query: 353 PPFYSDDPVTTCRKIVHW---KNHLKFPEEARLTPEAKDLICRLL 394
PPF T+C K + KN P + P A LI R+L
Sbjct: 224 PPFE-----TSCLKETYIRIKKNEYSVPRH--INPVASALIRRML 261
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 123/285 (43%), Gaps = 59/285 (20%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLY 172
+G+G F + + + ++A K + KS +L Q E + E + + + +V +
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 173 YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDI 232
F+D +++Y+++E + AR+++ Q++ ++ +H + IHRD+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 233 KPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGR 292
K NL L+ + +K+ DFGL ++ DG + CG
Sbjct: 169 KLGNLFLNDDMDVKIGDFGLA-----------------------TKIEFDGERKKXLCG- 204
Query: 293 RWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGY 352
TP+YIAPEVL KKG+ E D WSLG I+Y +LVG
Sbjct: 205 -------------------------TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
Query: 353 PPFYSDDPVTTCRKIVHW---KNHLKFPEEARLTPEAKDLICRLL 394
PPF T+C K + KN P + P A LI R+L
Sbjct: 240 PPFE-----TSCLKETYIRIKKNEYSVPRH--INPVASALIRRML 277
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 131/316 (41%), Gaps = 63/316 (19%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
D ++L+ IG G FG RL ++K+S + A+K +++ E + + R+L
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSL----RH 74
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
IV+ +L ++MEY GG++ ARF+ Q + + H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 226 NYIHRDIKPDNLLLDQNG--HMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
HRD+K +N LLD + +K+ FG K
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSK----------------------------- 165
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLG 342
+ H Q TVGTP YIAPEVLLKK Y G D WS G
Sbjct: 166 ---------------SSVLHSQ------PKDTVGTPAYIAPEVLLKKEYDGKVADVWSCG 204
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKF--PEEARLTPEAKDLICRL-LCDVEH 399
+Y MLVG PF + RK +H ++++ P+ ++PE + LI R+ + D
Sbjct: 205 VTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAK 264
Query: 400 RLGTLGSEQIKAHPWF 415
R+ +I+ H WF
Sbjct: 265 RISI---PEIRNHEWF 277
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 139/341 (40%), Gaps = 84/341 (24%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEML----------------- 145
+ ++ + L IG+G++G V+L + YAMK L K +++
Sbjct: 10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPA 69
Query: 146 ------SRGQVEHVRAERNLLAEVASHCIVKLYYSFQDA--EYLYLIMEYLPGGDVXXXX 197
RG +E V E +L ++ +VKL D ++LY++ E + G V
Sbjct: 70 PGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP 129
Query: 198 XXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
ARFY + IE +H IHRDIKP NLL+ ++GH+K++DFG+
Sbjct: 130 TLKPLSEDQ-ARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 258 CTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVG 317
++ L +TVG
Sbjct: 189 GSD-------------------------------------------------ALLSNTVG 199
Query: 318 TPDYIAPEVLL---KKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHL 374
TP ++APE L K G D W++G +Y + G PF + + KI L
Sbjct: 200 TPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKI--KSQAL 257
Query: 375 KFPEEARLTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPW 414
+FP++ + + KDLI R+L + E R+ +IK HPW
Sbjct: 258 EFPDQPDIAEDLKDLITRMLDKNPESRIVV---PEIKLHPW 295
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 145/340 (42%), Gaps = 72/340 (21%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
D F++ + +GRGA V C++K + YA+K LKK+ + VR E +L ++
Sbjct: 53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLSH 107
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
I+KL F+ + L++E + GG++ A + Q + A+ +H++
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN 167
Query: 226 NYIHRDIKPDNLLLDQ---NGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
+HRD+KP+NLL + +K++DFGL K
Sbjct: 168 GIVHRDLKPENLLYATPAPDAPLKIADFGLSK---------------------------- 199
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 342
+ + L + GTP Y APE+L YG E D WS+G
Sbjct: 200 ----------------------IVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVG 237
Query: 343 AIMYEMLVGYPPFYSD-DPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHR 400
I Y +L G+ PFY + R+I++ + + P ++ AKDL+ +L+ D + R
Sbjct: 238 IITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKR 297
Query: 401 LGTLGSEQIKAHPWFK---------DIAWDKLYEMEAAYK 431
L T + Q HPW D A KL E A K
Sbjct: 298 LTTFQALQ---HPWVTGKAANFVHMDTAQKKLQEFNARRK 334
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 133/326 (40%), Gaps = 62/326 (19%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
D +D + IG G FG RL ++K + + A+K +++ + + R+L
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSL----RH 75
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
IV+ +L +IMEY GG++ ARF+ Q + + H
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM 135
Query: 226 NYIHRDIKPDNLLLDQNG--HMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
HRD+K +N LLD + +K+ DFG K
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFGYSK----------------------------- 166
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLG 342
+ H Q STVGTP YIAPEVLL++ Y G D WS G
Sbjct: 167 ---------------SSVLHSQ------PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCG 205
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKF--PEEARLTPEAKDLICRLLCDVEHR 400
+Y MLVG PF + RK + +K+ P++ R++PE LI R+ V
Sbjct: 206 VTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIF--VADP 263
Query: 401 LGTLGSEQIKAHPWF-KDIAWDKLYE 425
+ +IK H WF K++ D + E
Sbjct: 264 ATRISIPEIKTHSWFLKNLPADLMNE 289
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 132/316 (41%), Gaps = 63/316 (19%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
D ++L+ IG G FG RL ++K++ + A+K +++ E + + R+L
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSL----RH 74
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
IV+ +L ++MEY GG++ ARF+ Q + + H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAM 134
Query: 226 NYIHRDIKPDNLLLDQN--GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
HRD+K +N LLD + +K++DFG K V
Sbjct: 135 QVAHRDLKLENTLLDGSPAPRLKIADFGYSK------------------------ASVLH 170
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLG 342
P+S G TP YIAPEVLLKK Y G D WS G
Sbjct: 171 SQPKSAVG--------------------------TPAYIAPEVLLKKEYDGKVADVWSCG 204
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKF--PEEARLTPEAKDLICRL-LCDVEH 399
+Y MLVG PF + RK +H ++++ P+ ++PE + LI R+ + D
Sbjct: 205 VTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAK 264
Query: 400 RLGTLGSEQIKAHPWF 415
R+ +I+ H WF
Sbjct: 265 RISI---PEIRNHEWF 277
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 136/314 (43%), Gaps = 60/314 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+ ++ ++ +G G+FG+V+L +G A+K + K + + E + L +
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 72
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
I+KLY + + + +++EY G ++ AR + Q + A+E H+
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 131
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
H +HRD+KP+NLLLD++ ++K++DFGL + DG
Sbjct: 132 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIM------------------------TDGN 167
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGA 343
F ++ C G+P+Y APEV+ K Y G E D WS G
Sbjct: 168 FLKTSC--------------------------GSPNYAAPEVISGKLYAGPEVDVWSCGV 201
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWKNHL-KFPEEARLTPEAKDLICRLLCDVEHRLG 402
I+Y ML PF + + I + L KF L+P A LI R+L + + L
Sbjct: 202 ILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKF-----LSPGAAGLIKRML--IVNPLN 254
Query: 403 TLGSEQIKAHPWFK 416
+ +I WFK
Sbjct: 255 RISIHEIMQDDWFK 268
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 137/314 (43%), Gaps = 60/314 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+ ++ ++ +G G+FG+V+L +G A+K + K + + E + L +
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 71
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
I+KLY + + + +++EY G ++ AR + Q + A+E H+
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 130
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
H +HRD+KP+NLLLD++ ++K++DFGL ++ DG
Sbjct: 131 HKIVHRDLKPENLLLDEHLNVKIADFGLS------------------------NIMTDGN 166
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGA 343
F ++ C G+P+Y APEV+ K Y G E D WS G
Sbjct: 167 FLKTSC--------------------------GSPNYAAPEVISGKLYAGPEVDVWSCGV 200
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWKNHL-KFPEEARLTPEAKDLICRLLCDVEHRLG 402
I+Y ML PF + + I + L KF L+P A LI R+L + + L
Sbjct: 201 ILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKF-----LSPGAAGLIKRML--IVNPLN 253
Query: 403 TLGSEQIKAHPWFK 416
+ +I WFK
Sbjct: 254 RISIHEIMQDDWFK 267
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 137/314 (43%), Gaps = 60/314 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+ ++ ++ +G G+FG+V+L +G A+K + K + + E + L +
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 62
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
I+KLY + + + +++EY G ++ AR + Q + A+E H+
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 121
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
H +HRD+KP+NLLLD++ ++K++DFGL ++ DG
Sbjct: 122 HKIVHRDLKPENLLLDEHLNVKIADFGLS------------------------NIMTDGN 157
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGA 343
F ++ C G+P+Y APEV+ K Y G E D WS G
Sbjct: 158 FLKTSC--------------------------GSPNYAAPEVISGKLYAGPEVDVWSCGV 191
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWKNHL-KFPEEARLTPEAKDLICRLLCDVEHRLG 402
I+Y ML PF + + I + L KF L+P A LI R+L + + L
Sbjct: 192 ILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKF-----LSPGAAGLIKRML--IVNPLN 244
Query: 403 TLGSEQIKAHPWFK 416
+ +I WFK
Sbjct: 245 RISIHEIMQDDWFK 258
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 137/314 (43%), Gaps = 60/314 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+ ++ ++ +G G+FG+V+L +G A+K + K + + E + L +
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 66
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
I+KLY + + + +++EY G ++ AR + Q + A+E H+
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 125
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
H +HRD+KP+NLLLD++ ++K++DFGL ++ DG
Sbjct: 126 HKIVHRDLKPENLLLDEHLNVKIADFGLS------------------------NIMTDGN 161
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGA 343
F ++ C G+P+Y APEV+ K Y G E D WS G
Sbjct: 162 FLKTSC--------------------------GSPNYAAPEVISGKLYAGPEVDVWSCGV 195
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWKNHL-KFPEEARLTPEAKDLICRLLCDVEHRLG 402
I+Y ML PF + + I + L KF L+P A LI R+L + + L
Sbjct: 196 ILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKF-----LSPGAAGLIKRML--IVNPLN 248
Query: 403 TLGSEQIKAHPWFK 416
+ +I WFK
Sbjct: 249 RISIHEIMQDDWFK 262
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 141/334 (42%), Gaps = 68/334 (20%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
D + + IG G++ E + C K + YA+K + KS+ ++E +L
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIE-------ILLRYGQ 79
Query: 166 H-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
H I+ L + D +++YL+ E + GG++ A F + +E +H
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 225 HNYIHRDIKPDNLL-LDQNGH---MKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMD 280
+HRD+KP N+L +D++G+ +++ DFG K L N
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN-------------------- 179
Query: 281 VDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 340
L + T +++APEVL ++GY CD WS
Sbjct: 180 -----------------------------GLLMTPCYTANFVAPEVLKRQGYDEGCDIWS 210
Query: 341 LGAIMYEMLVGYPPFY---SDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDV 397
LG ++Y ML GY PF SD P +I K L ++ AKDL+ ++L
Sbjct: 211 LGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVD 270
Query: 398 EHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYK 431
H+ L ++Q+ HPW DKL + + +++
Sbjct: 271 PHQ--RLTAKQVLQHPWVTQ--KDKLPQSQLSHQ 300
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 150/335 (44%), Gaps = 62/335 (18%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLY 172
I+G G FG+V C+E +G A K +K M + E V+ E +++ ++ +++LY
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDK---EEVKNEISVMNQLDHANLIQLY 152
Query: 173 YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR-FYIAQSVLAIESIHKHNYIHRD 231
+F+ + L+MEY+ GG++ + ++ Q I +H+ +H D
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 232 IKPDNLL-LDQNG-HMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESG 289
+KP+N+L ++++ +K+ DFGL
Sbjct: 213 LKPENILCVNRDAKQIKIIDFGLA------------------------------------ 236
Query: 290 CGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 349
RR+K P E+L+ GTP+++APEV+ D WS+G I Y +L
Sbjct: 237 --RRYK-PREKLK-----------VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLL 282
Query: 350 VGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQI 409
G PF D+ T I+ + L+ E ++ EAK+ I +LL ++ + + + +
Sbjct: 283 SGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLL--IKEKSWRISASEA 340
Query: 410 KAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFM 444
HPW D KL+ +A K + G D Q+F+
Sbjct: 341 LKHPWLSD---HKLHSRLSAQKKKNRGS-DAQDFV 371
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 133/317 (41%), Gaps = 66/317 (20%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
D + + IG G++ E + C K + YA+K + KS+ ++E +L
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIE-------ILLRYGQ 79
Query: 166 H-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
H I+ L + D +++YL+ E + GG++ A F + +E +H
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 225 HNYIHRDIKPDNLL-LDQNGH---MKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMD 280
+HRD+KP N+L +D++G+ +++ DFG K L N
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN-------------------- 179
Query: 281 VDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 340
L + T +++APEVL ++GY CD WS
Sbjct: 180 -----------------------------GLLMTPCYTANFVAPEVLKRQGYDEGCDIWS 210
Query: 341 LGAIMYEMLVGYPPFY---SDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDV 397
LG ++Y ML GY PF SD P +I K L ++ AKDL+ ++L
Sbjct: 211 LGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVD 270
Query: 398 EHRLGTLGSEQIKAHPW 414
H+ L ++Q+ HPW
Sbjct: 271 PHQ--RLTAKQVLQHPW 285
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 129/318 (40%), Gaps = 74/318 (23%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH-CIVKLY 172
+G G+F R C KKS +A+K ++S+ + + E L H IVKL+
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVK------IISKRMEANTQKEITALKLCEGHPNIVKLH 72
Query: 173 YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDI 232
F D + +L+ME L GG++ A + + + V A+ +H +HRD+
Sbjct: 73 EVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDL 132
Query: 233 KPDNLLL---DQNGHMKLSDFGLC--KPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPE 287
KP+NLL + N +K+ DFG KP D
Sbjct: 133 KPENLLFTDENDNLEIKIIDFGFARLKPPD------------------------------ 162
Query: 288 SGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 347
+ K+P L Y APE+L + GY CD WSLG I+Y
Sbjct: 163 ---NQPLKTPCFTLH------------------YAAPELLNQNGYDESCDLWSLGVILYT 201
Query: 348 MLVGYPPFYSDDPVTTCRKIVHW-----KNHLKFPEEA--RLTPEAKDLICRLL-CDVEH 399
ML G PF S D TC V K F EA ++ EAKDLI LL D
Sbjct: 202 MLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNK 261
Query: 400 RLGTLGSEQIKAHPWFKD 417
RL G ++ + W +D
Sbjct: 262 RLKMSG---LRYNEWLQD 276
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 135/316 (42%), Gaps = 57/316 (18%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
++ + + L +G G FG+V++ + + +G+ A+K L + ++ S V ++ E L
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK 66
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
I+KLY +++MEY+ GG++ AR Q + A++
Sbjct: 67 LFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDY 126
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H+H +HRD+KP+N+LLD + + K++DFGL +M
Sbjct: 127 CHRHMVVHRDLKPENVLLDAHMNAKIADFGLS------------------------NMMS 162
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWS 340
DG F + C G+P+Y APEV+ + Y G E D WS
Sbjct: 163 DGEFLRTSC--------------------------GSPNYAAPEVISGRLYAGPEVDIWS 196
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
G I+Y +L G PF + T +KI PE L L+ +L +
Sbjct: 197 CGVILYALLCGTLPFDDEHVPTLFKKI--RGGVFYIPE--YLNRSVATLLMHMLQVDPLK 252
Query: 401 LGTLGSEQIKAHPWFK 416
T+ + I+ H WFK
Sbjct: 253 RATI--KDIREHEWFK 266
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 140/324 (43%), Gaps = 64/324 (19%)
Query: 105 VDDF-DLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKK--SEMLSRG-QVEHVRAERNLL 160
V+DF D+ +G G F V+ C+EK +G YA K +KK S RG E + E ++L
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 161 AEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIE 220
+V H ++ L+ +++ + LI+E + GG++ A +I Q + +
Sbjct: 70 RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVN 129
Query: 221 SIHKHNYIHRDIKPDN-LLLDQN---GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXX 276
+H H D+KP+N +LLD+N H+KL DFGL ++
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE------------------- 170
Query: 277 XSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMEC 336
G +K + GTP+++APE++ + G+E
Sbjct: 171 -------------DGVEFK------------------NIFGTPEFVAPEIVNYEPLGLEA 199
Query: 337 DWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEE--ARLTPEAKDLICRLL 394
D WS+G I Y +L G PF D T I F EE ++ + AKD I +LL
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITAVS--YDFDEEFFSQTSELAKDFIRKLL 257
Query: 395 CDVEHRLGTLGSEQIKAHPWFKDI 418
V+ L ++ HPW +
Sbjct: 258 --VKETRKRLTIQEALRHPWITPV 279
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 150/351 (42%), Gaps = 71/351 (20%)
Query: 105 VDDF-DLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKK--SEMLSRG-QVEHVRAERNLL 160
V+DF D+ +G G F V+ C+EK +G YA K +KK S RG E + E ++L
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 161 AEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIE 220
+V H ++ L+ +++ + LI+E + GG++ A +I Q + +
Sbjct: 70 RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVN 129
Query: 221 SIHKHNYIHRDIKPDNL-LLDQN---GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXX 276
+H H D+KP+N+ LLD+N H+KL DFGL +
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-------------------- 169
Query: 277 XSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMEC 336
E G + + GTP+++APE++ + G+E
Sbjct: 170 ----------EDGVEFK--------------------NIFGTPEFVAPEIVNYEPLGLEA 199
Query: 337 DWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEE--ARLTPEAKDLICRLL 394
D WS+G I Y +L G PF D T I F EE ++ + AKD I +LL
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITAVS--YDFDEEFFSQTSELAKDFIRKLL 257
Query: 395 CDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMK 445
V+ L ++ HPW + +A + E V++ +NF K
Sbjct: 258 --VKETRKRLTIQEALRHPWITPVD-----NQQAMVRRE--SVVNLENFRK 299
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 134/311 (43%), Gaps = 61/311 (19%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
++L IG G F +V+L +G + A+K + K+ + S + ++ E L +
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTEIEALKNLRHQH 69
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNY 227
I +LY+ + A +++++EY PGG++ R Q V A+ +H Y
Sbjct: 70 ICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGY 129
Query: 228 IHRDIKPDNLLLDQNGHMKLSDFGLC-KPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFP 286
HRD+KP+NLL D+ +KL DFGLC KP
Sbjct: 130 AHRDLKPENLLFDEYHKLKLIDFGLCAKP------------------------------- 158
Query: 287 ESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIM 345
+ N+ + G+ Y APE++ K Y G E D WS+G ++
Sbjct: 159 ------------------KGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILL 200
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHRLGTL 404
Y ++ G+ PF D+ + +KI+ K+ L+P + L+ ++L D + R+
Sbjct: 201 YVLMCGFLPFDDDNVMALYKKIMRG----KYDVPKWLSPSSILLLQQMLQVDPKKRISM- 255
Query: 405 GSEQIKAHPWF 415
+ + HPW
Sbjct: 256 --KNLLNHPWI 264
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 139/324 (42%), Gaps = 64/324 (19%)
Query: 105 VDDF-DLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKK--SEMLSRG-QVEHVRAERNLL 160
V+DF D+ +G G F V+ C+EK +G YA K +KK S RG E + E ++L
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 161 AEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIE 220
+V H ++ L+ +++ + LI+E + GG++ A +I Q + +
Sbjct: 70 RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVN 129
Query: 221 SIHKHNYIHRDIKPDN-LLLDQN---GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXX 276
+H H D+KP+N +LLD+N H+KL DFGL ++
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE------------------- 170
Query: 277 XSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMEC 336
G +K + GTP+++APE++ + G+E
Sbjct: 171 -------------DGVEFK------------------NIFGTPEFVAPEIVNYEPLGLEA 199
Query: 337 DWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEE--ARLTPEAKDLICRLL 394
D WS+G I Y +L G PF D T I F EE + + AKD I +LL
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITSVS--YDFDEEFFSHTSELAKDFIRKLL 257
Query: 395 CDVEHRLGTLGSEQIKAHPWFKDI 418
V+ L ++ HPW +
Sbjct: 258 --VKETRKRLTIQEALRHPWITPV 279
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 139/324 (42%), Gaps = 64/324 (19%)
Query: 105 VDDF-DLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKK--SEMLSRG-QVEHVRAERNLL 160
V+DF D+ +G G F V+ C+EK +G YA K +KK S RG E + E ++L
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 161 AEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIE 220
+V H ++ L+ +++ + LI+E + GG++ A +I Q + +
Sbjct: 70 RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVN 129
Query: 221 SIHKHNYIHRDIKPDN-LLLDQN---GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXX 276
+H H D+KP+N +LLD+N H+KL DFGL ++
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE------------------- 170
Query: 277 XSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMEC 336
G +K + GTP+++APE++ + G+E
Sbjct: 171 -------------DGVEFK------------------NIFGTPEFVAPEIVNYEPLGLEA 199
Query: 337 DWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEE--ARLTPEAKDLICRLL 394
D WS+G I Y +L G PF D T I F EE + + AKD I +LL
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITSVS--YDFDEEFFSHTSELAKDFIRKLL 257
Query: 395 CDVEHRLGTLGSEQIKAHPWFKDI 418
V+ L ++ HPW +
Sbjct: 258 --VKETRKRLTIQEALRHPWITPV 279
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 121/277 (43%), Gaps = 66/277 (23%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG G+ G V + EK +G A+KK+ + R E + E ++ + +V +Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRR---ELLFNEVVIMRDYHHDNVVDMYS 109
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-AIESIHKHNYIHRDI 232
S+ + L+++ME+L GG + +A + SVL A+ +H IHRDI
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT--VCLSVLRALSYLHNQGVIHRDI 167
Query: 233 KPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGR 292
K D++LL +G +KLSDFG C +
Sbjct: 168 KSDSILLTSDGRIKLSDFGFCAQVS----------------------------------- 192
Query: 293 RWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGY 352
++ +RK VGTP ++APEV+ + YG E D WSLG ++ EM+ G
Sbjct: 193 -----------KEVPKRK---XLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 238
Query: 353 PPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDL 389
PP++++ P+ R+I L P KDL
Sbjct: 239 PPYFNEPPLQAMRRI-----------RDSLPPRVKDL 264
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 149/351 (42%), Gaps = 71/351 (20%)
Query: 105 VDDF-DLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKK--SEMLSRG-QVEHVRAERNLL 160
V+DF D+ +G G F V+ C+EK +G YA K +KK S RG E + E ++L
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 161 AEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIE 220
+V H ++ L+ +++ + LI+E + GG++ A +I Q + +
Sbjct: 70 RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVN 129
Query: 221 SIHKHNYIHRDIKPDNL-LLDQN---GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXX 276
+H H D+KP+N+ LLD+N H+KL DFGL +
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-------------------- 169
Query: 277 XSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMEC 336
E G + + GTP+++APE++ + G+E
Sbjct: 170 ----------EDGVEFK--------------------NIFGTPEFVAPEIVNYEPLGLEA 199
Query: 337 DWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEE--ARLTPEAKDLICRLL 394
D WS+G I Y +L G PF D T I F EE + + AKD I +LL
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITSVS--YDFDEEFFSHTSELAKDFIRKLL 257
Query: 395 CDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMK 445
V+ L ++ HPW + +A + E V++ +NF K
Sbjct: 258 --VKETRKRLTIQEALRHPWITPVD-----NQQAMVRRE--SVVNLENFRK 299
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 134/316 (42%), Gaps = 57/316 (18%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
++ + + L +G G FG+V++ + + +G+ A+K L + ++ S V ++ E L
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK 66
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
I+KLY +++MEY+ GG++ AR Q + A++
Sbjct: 67 LFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDY 126
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H+H +HRD+KP+N+LLD + + K++DFGL +M
Sbjct: 127 CHRHMVVHRDLKPENVLLDAHMNAKIADFGLS------------------------NMMS 162
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWS 340
DG F C G+P+Y APEV+ + Y G E D WS
Sbjct: 163 DGEFLRDSC--------------------------GSPNYAAPEVISGRLYAGPEVDIWS 196
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
G I+Y +L G PF + T +KI PE L L+ +L +
Sbjct: 197 CGVILYALLCGTLPFDDEHVPTLFKKI--RGGVFYIPE--YLNRSVATLLMHMLQVDPLK 252
Query: 401 LGTLGSEQIKAHPWFK 416
T+ + I+ H WFK
Sbjct: 253 RATI--KDIREHEWFK 266
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 139/322 (43%), Gaps = 63/322 (19%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRG--QVEHVRAERNLLAEV 163
D ++L +IG+GAF VR C +++G +A+K + ++ S E ++ E ++ +
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGD----VXXXXXXXXXXXXXVARFYIAQSVLAI 219
IV+L ++ LY++ E++ G D + VA Y+ Q + A+
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 220 ESIHKHNYIHRDIKPDNLLL---DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXX 276
H +N IHRD+KP+N+LL + + +KL DFG+ L + L A
Sbjct: 144 RYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVA------------- 190
Query: 277 XSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMEC 336
GR VGTP ++APEV+ ++ YG
Sbjct: 191 -----GGR-------------------------------VGTPHFMAPEVVKREPYGKPV 214
Query: 337 DWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICR-LLC 395
D W G I++ +L G PFY I+ K + + + ++ AKDL+ R L+
Sbjct: 215 DVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLML 273
Query: 396 DVEHRLGTLGSEQIKAHPWFKD 417
D R+ + HPW K+
Sbjct: 274 DPAERITVY---EALNHPWLKE 292
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 60/310 (19%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
D IG G+ G V + + SG + A+KK+ + R E + E ++ +
Sbjct: 33 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQHEN 89
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNY 227
+V++Y S+ + L+++ME+L GG + +A +A + A+ +H
Sbjct: 90 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGV 148
Query: 228 IHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPE 287
IHRDIK D++LL +G +KLSDFG C +
Sbjct: 149 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSK----------------------------- 179
Query: 288 SGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 347
++ RRK VGTP ++APE++ + YG E D WSLG ++ E
Sbjct: 180 -----------------EVPRRK---XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE 219
Query: 348 MLVGYPPFYSDDPVTTCRKIVHWKNHL--KFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
M+ G PP++++ P+ + I +++L + +++P K + RLL + T
Sbjct: 220 MVDGEPPYFNEPPLKAMKMI---RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT-- 274
Query: 406 SEQIKAHPWF 415
+ ++ HP+
Sbjct: 275 AAELLKHPFL 284
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 60/310 (19%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
D IG G+ G V + + SG + A+KK+ + R E + E ++ +
Sbjct: 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQHEN 132
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNY 227
+V++Y S+ + L+++ME+L GG + +A +A + A+ +H
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGV 191
Query: 228 IHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPE 287
IHRDIK D++LL +G +KLSDFG C +
Sbjct: 192 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSK----------------------------- 222
Query: 288 SGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 347
++ RRK VGTP ++APE++ + YG E D WSLG ++ E
Sbjct: 223 -----------------EVPRRK---XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE 262
Query: 348 MLVGYPPFYSDDPVTTCRKIVHWKNHL--KFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
M+ G PP++++ P+ + I +++L + +++P K + RLL + T
Sbjct: 263 MVDGEPPYFNEPPLKAMKMI---RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT-- 317
Query: 406 SEQIKAHPWF 415
+ ++ HP+
Sbjct: 318 AAELLKHPFL 327
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 60/310 (19%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
D IG G+ G V + + SG + A+KK+ + R E + E ++ +
Sbjct: 31 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQHEN 87
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNY 227
+V++Y S+ + L+++ME+L GG + +A +A + A+ +H
Sbjct: 88 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGV 146
Query: 228 IHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPE 287
IHRDIK D++LL +G +KLSDFG C +
Sbjct: 147 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSK----------------------------- 177
Query: 288 SGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 347
++ RRK VGTP ++APE++ + YG E D WSLG ++ E
Sbjct: 178 -----------------EVPRRK---XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE 217
Query: 348 MLVGYPPFYSDDPVTTCRKIVHWKNHL--KFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
M+ G PP++++ P+ + I +++L + +++P K + RLL + T
Sbjct: 218 MVDGEPPYFNEPPLKAMKMI---RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT-- 272
Query: 406 SEQIKAHPWF 415
+ ++ HP+
Sbjct: 273 AAELLKHPFL 282
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 136/322 (42%), Gaps = 63/322 (19%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLS--RG-QVEHVRAERNLLAE 162
D +++ +G G F VR C++K +G YA K +KK + S RG E + E N+L E
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 163 VASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI 222
+ I+ L+ F++ + LI+E + GG++ A ++ Q + + +
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 124
Query: 223 HKHNYIHRDIKPDNL-LLDQN---GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
H H D+KP+N+ LLD+N +KL DFG+ ++
Sbjct: 125 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA-------------------- 164
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
G +K+ GTP+++APE++ + G+E D
Sbjct: 165 ------------GNEFKN------------------IFGTPEFVAPEIVNYEPLGLEADM 194
Query: 339 WSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEE--ARLTPEAKDLICRLLCD 396
WS+G I Y +L G PF + T I + F EE + + AKD I RLL
Sbjct: 195 WSIGVITYILLSGASPFLGETKQETLTNISAV--NYDFDEEYFSNTSELAKDFIRRLLVK 252
Query: 397 VEHRLGTLGSEQIKAHPWFKDI 418
R T+ Q H W K I
Sbjct: 253 DPKRRMTIA--QSLEHSWIKAI 272
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 137/304 (45%), Gaps = 60/304 (19%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG G+ G V + + SG + A+KK+ + R E + E ++ + +V++Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQHENVVEMYN 84
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIK 233
S+ + L+++ME+L GG + +A +A + A+ +H IHRDIK
Sbjct: 85 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIK 143
Query: 234 PDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRR 293
D++LL +G +KLSDFG C +
Sbjct: 144 SDSILLTHDGRVKLSDFGFCAQVSK----------------------------------- 168
Query: 294 WKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 353
++ RRK VGTP ++APE++ + YG E D WSLG ++ EM+ G P
Sbjct: 169 -----------EVPRRK---XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 214
Query: 354 PFYSDDPVTTCRKIVHWKNHL--KFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKA 411
P++++ P+ + I +++L + +++P K + RLL + T + ++
Sbjct: 215 PYFNEPPLKAMKMI---RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT--AAELLK 269
Query: 412 HPWF 415
HP+
Sbjct: 270 HPFL 273
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 137/304 (45%), Gaps = 60/304 (19%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG G+ G V + + SG + A+KK+ + R E + E ++ + +V++Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQHENVVEMYN 88
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIK 233
S+ + L+++ME+L GG + +A +A + A+ +H IHRDIK
Sbjct: 89 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIK 147
Query: 234 PDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRR 293
D++LL +G +KLSDFG C +
Sbjct: 148 SDSILLTHDGRVKLSDFGFCAQVSK----------------------------------- 172
Query: 294 WKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 353
++ RRK VGTP ++APE++ + YG E D WSLG ++ EM+ G P
Sbjct: 173 -----------EVPRRK---XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 218
Query: 354 PFYSDDPVTTCRKIVHWKNHL--KFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKA 411
P++++ P+ + I +++L + +++P K + RLL + T + ++
Sbjct: 219 PYFNEPPLKAMKMI---RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT--AAELLK 273
Query: 412 HPWF 415
HP+
Sbjct: 274 HPFL 277
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 146/332 (43%), Gaps = 60/332 (18%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+ ++ LL IG+G F +V+L + +G A+K + K++ L+ ++ + E ++ +
Sbjct: 11 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-LNPTSLQKLFREVRIMKILN 69
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
IVKL+ + + LYLIMEY GG+V AR Q V A++ H+
Sbjct: 70 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 129
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+HRD+K +NLLLD + ++K++DFG V G+
Sbjct: 130 KRIVHRDLKAENLLLDADMNIKIADFGFSN-----------------------EFTVGGK 166
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGA 343
++ C G+P Y APE+ K Y G E D WSLG
Sbjct: 167 L-DTFC--------------------------GSPPYAAPELFQGKKYDGPEVDVWSLGV 199
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGT 403
I+Y ++ G PF + +++ K + F ++ + ++L+ R L + GT
Sbjct: 200 ILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKRFLVLNPIKRGT 255
Query: 404 LGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVN 435
L EQI W A + E++ +PE++
Sbjct: 256 L--EQIMKDRWIN--AGHEEDELKPFVEPELD 283
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 129/289 (44%), Gaps = 57/289 (19%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG+GA G V + +G A++++ + + E + E ++ E + IV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 84
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIK 233
S+ + L+++MEYL GG + +A + + A+E +H + IHRDIK
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV-CRECLQALEFLHSNQVIHRDIK 143
Query: 234 PDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRR 293
DN+LL +G +KL+DFG C
Sbjct: 144 SDNILLGMDGSVKLTDFGFCA--------------------------------------- 164
Query: 294 WKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 353
Q+ Q R ++ VGTP ++APEV+ +K YG + D WSLG + EM+ G P
Sbjct: 165 ------QITPEQSKRSEM----VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
Query: 354 PFYSDDPVTTCRKI-VHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHR 400
P+ +++P+ I + L+ PE +L+ +D + R L DVE R
Sbjct: 215 PYLNENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLDMDVEKR 261
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 128/289 (44%), Gaps = 57/289 (19%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG+GA G V + +G A++++ + + E + E ++ E + IV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 85
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIK 233
S+ + L+++MEYL GG + +A + + A+E +H + IHRDIK
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV-CRECLQALEFLHSNQVIHRDIK 144
Query: 234 PDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRR 293
DN+LL +G +KL+DFG C
Sbjct: 145 SDNILLGMDGSVKLTDFGFCA--------------------------------------- 165
Query: 294 WKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 353
Q+ Q R + VGTP ++APEV+ +K YG + D WSLG + EM+ G P
Sbjct: 166 ------QITPEQSKRSXM----VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 215
Query: 354 PFYSDDPVTTCRKI-VHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHR 400
P+ +++P+ I + L+ PE +L+ +D + R L DVE R
Sbjct: 216 PYLNENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKR 262
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 140/310 (45%), Gaps = 60/310 (19%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
D IG G+ G V + + SG + A+KK+ ++ + + E + E ++ +
Sbjct: 153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM---DLRKQQRRELLFNEVVIMRDYQHEN 209
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNY 227
+V++Y S+ + L+++ME+L GG + +A +A + A+ +H
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGV 268
Query: 228 IHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPE 287
IHRDIK D++LL +G +KLSDFG C +
Sbjct: 269 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSK----------------------------- 299
Query: 288 SGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 347
++ RRK VGTP ++APE++ + YG E D WSLG ++ E
Sbjct: 300 -----------------EVPRRK---XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE 339
Query: 348 MLVGYPPFYSDDPVTTCRKIVHWKNHL--KFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
M+ G PP++++ P+ + I +++L + +++P K + RLL + T
Sbjct: 340 MVDGEPPYFNEPPLKAMKMI---RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT-- 394
Query: 406 SEQIKAHPWF 415
+ ++ HP+
Sbjct: 395 AAELLKHPFL 404
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 128/289 (44%), Gaps = 57/289 (19%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG+GA G V + +G A++++ + + E + E ++ E + IV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 84
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIK 233
S+ + L+++MEYL GG + +A + + A+E +H + IHRDIK
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV-CRECLQALEFLHSNQVIHRDIK 143
Query: 234 PDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRR 293
DN+LL +G +KL+DFG C
Sbjct: 144 SDNILLGMDGSVKLTDFGFCA--------------------------------------- 164
Query: 294 WKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 353
Q+ Q R + VGTP ++APEV+ +K YG + D WSLG + EM+ G P
Sbjct: 165 ------QITPEQSKRSTM----VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
Query: 354 PFYSDDPVTTCRKI-VHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHR 400
P+ +++P+ I + L+ PE +L+ +D + R L DVE R
Sbjct: 215 PYLNENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLDMDVEKR 261
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 128/289 (44%), Gaps = 57/289 (19%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG+GA G V + +G A++++ + + E + E ++ E + IV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 84
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIK 233
S+ + L+++MEYL GG + +A + + A+E +H + IHRDIK
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV-CRECLQALEFLHSNQVIHRDIK 143
Query: 234 PDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRR 293
DN+LL +G +KL+DFG C
Sbjct: 144 SDNILLGMDGSVKLTDFGFCA--------------------------------------- 164
Query: 294 WKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 353
Q+ Q R + VGTP ++APEV+ +K YG + D WSLG + EM+ G P
Sbjct: 165 ------QITPEQSKRSXM----VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
Query: 354 PFYSDDPVTTCRKI-VHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHR 400
P+ +++P+ I + L+ PE +L+ +D + R L DVE R
Sbjct: 215 PYLNENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKR 261
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 136/322 (42%), Gaps = 62/322 (19%)
Query: 104 SVDDF-DLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLS--RG-QVEHVRAERNL 159
+VDD+ D +G G F V+ C+EK +G YA K +KK S RG E + E ++
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 160 LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
L E+ ++ L+ +++ + LI+E + GG++ A ++ Q + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 220 ESIHKHNYIHRDIKPDN-LLLDQN---GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
+H H D+KP+N +LLD+N +K+ DFGL +D
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID------------------ 169
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
G +K + GTP+++APE++ + G+E
Sbjct: 170 --------------FGNEFK------------------NIFGTPEFVAPEIVNYEPLGLE 197
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
D WS+G I Y +L G PF D T + + + + AKD I RLL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 396 -DVEHRLGTLGSEQIKAHPWFK 416
D + R+ S Q HPW K
Sbjct: 258 KDPKKRMTIQDSLQ---HPWIK 276
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 145/332 (43%), Gaps = 60/332 (18%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+ ++ LL IG+G F +V+L + +G A+K + K++ L+ ++ + E ++ +
Sbjct: 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-LNPTSLQKLFREVRIMKILN 72
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
IVKL+ + + LYLIMEY GG+V AR Q V A++ H+
Sbjct: 73 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 132
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+HRD+K +NLLLD + ++K++DFG V G+
Sbjct: 133 KRIVHRDLKAENLLLDADMNIKIADFGFSN-----------------------EFTVGGK 169
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGA 343
++ C G P Y APE+ K Y G E D WSLG
Sbjct: 170 L-DAFC--------------------------GAPPYAAPELFQGKKYDGPEVDVWSLGV 202
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGT 403
I+Y ++ G PF + +++ K + F ++ + ++L+ R L + GT
Sbjct: 203 ILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKRFLVLNPIKRGT 258
Query: 404 LGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVN 435
L EQI W A + E++ +PE++
Sbjct: 259 L--EQIMKDRWIN--AGHEEDELKPFVEPELD 286
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 136/322 (42%), Gaps = 62/322 (19%)
Query: 104 SVDDF-DLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLS--RG-QVEHVRAERNL 159
+VDD+ D +G G F V+ C+EK +G YA K +KK S RG E + E ++
Sbjct: 8 NVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 160 LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
L E+ ++ L+ +++ + LI+E + GG++ A ++ Q + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 220 ESIHKHNYIHRDIKPDN-LLLDQN---GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
+H H D+KP+N +LLD+N +K+ DFGL +D
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID------------------ 169
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
G +K + GTP+++APE++ + G+E
Sbjct: 170 --------------FGNEFK------------------NIFGTPEFVAPEIVNYEPLGLE 197
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
D WS+G I Y +L G PF D T + + + + AKD I RLL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 396 -DVEHRLGTLGSEQIKAHPWFK 416
D + R+ S Q HPW K
Sbjct: 258 KDPKKRMTIQDSLQ---HPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 136/322 (42%), Gaps = 62/322 (19%)
Query: 104 SVDDF-DLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLS--RG-QVEHVRAERNL 159
+VDD+ D +G G F V+ C+EK +G YA K +KK S RG E + E ++
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 160 LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
L E+ ++ L+ +++ + LI+E + GG++ A ++ Q + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 220 ESIHKHNYIHRDIKPDN-LLLDQN---GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
+H H D+KP+N +LLD+N +K+ DFGL +D
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----------------- 170
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
G +K+ GTP+++APE++ + G+E
Sbjct: 171 ---------------GNEFKN------------------IFGTPEFVAPEIVNYEPLGLE 197
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
D WS+G I Y +L G PF D T + + + + AKD I RLL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 396 -DVEHRLGTLGSEQIKAHPWFK 416
D + R+ S Q HPW K
Sbjct: 258 KDPKKRMTIQDSLQ---HPWIK 276
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 138/323 (42%), Gaps = 65/323 (20%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLS--RG-QVEHVRAERNLLAE 162
D +++ +G G F VR C++K +G YA K +KK + S RG E + E N+L E
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 163 VASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI 222
+ I+ L+ F++ + LI+E + GG++ A ++ Q + + +
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 145
Query: 223 HKHNYIHRDIKPDN-LLLDQN---GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
H H D+KP+N +LLD+N +KL DFG+ ++
Sbjct: 146 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA-------------------- 185
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
G +K+ GTP+++APE++ + G+E D
Sbjct: 186 ------------GNEFKN------------------IFGTPEFVAPEIVNYEPLGLEADM 215
Query: 339 WSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEE--ARLTPEAKDLICRLLC- 395
WS+G I Y +L G PF + T I + F EE + + AKD I RLL
Sbjct: 216 WSIGVITYILLSGASPFLGETKQETLTNISAV--NYDFDEEYFSNTSELAKDFIRRLLVK 273
Query: 396 DVEHRLGTLGSEQIKAHPWFKDI 418
D + R+ S + H W K I
Sbjct: 274 DPKRRMXIAQSLE---HSWIKAI 293
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 136/322 (42%), Gaps = 62/322 (19%)
Query: 104 SVDDF-DLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLS--RG-QVEHVRAERNL 159
+VDD+ D +G G F V+ C+EK +G YA K +KK S RG E + E ++
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 160 LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
L E+ ++ L+ +++ + LI+E + GG++ A ++ Q + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 220 ESIHKHNYIHRDIKPDN-LLLDQN---GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
+H H D+KP+N +LLD+N +K+ DFGL +D
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID------------------ 169
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
G +K + GTP+++APE++ + G+E
Sbjct: 170 --------------FGNEFK------------------NIFGTPEFVAPEIVNYEPLGLE 197
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
D WS+G I Y +L G PF D T + + + + AKD I RLL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 396 -DVEHRLGTLGSEQIKAHPWFK 416
D + R+ S Q HPW K
Sbjct: 258 KDPKKRMTIQDSLQ---HPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 136/322 (42%), Gaps = 62/322 (19%)
Query: 104 SVDDF-DLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLS--RG-QVEHVRAERNL 159
+VDD+ D +G G F V+ C+EK +G YA K +KK S RG E + E ++
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 160 LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
L E+ ++ L+ +++ + LI+E + GG++ A ++ Q + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 220 ESIHKHNYIHRDIKPDN-LLLDQN---GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
+H H D+KP+N +LLD+N +K+ DFGL +D
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID------------------ 169
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
G +K + GTP+++APE++ + G+E
Sbjct: 170 --------------FGNEFK------------------NIFGTPEFVAPEIVNYEPLGLE 197
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
D WS+G I Y +L G PF D T + + + + AKD I RLL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 396 -DVEHRLGTLGSEQIKAHPWFK 416
D + R+ S Q HPW K
Sbjct: 258 KDPKKRMTIQDSLQ---HPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 136/322 (42%), Gaps = 62/322 (19%)
Query: 104 SVDDF-DLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLS--RG-QVEHVRAERNL 159
+VDD+ D +G G F V+ C+EK +G YA K +KK S RG E + E ++
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 160 LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
L E+ ++ L+ +++ + LI+E + GG++ A ++ Q + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 220 ESIHKHNYIHRDIKPDN-LLLDQN---GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
+H H D+KP+N +LLD+N +K+ DFGL +D
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----------------- 170
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
G +K+ GTP+++APE++ + G+E
Sbjct: 171 ---------------GNEFKN------------------IFGTPEFVAPEIVNYEPLGLE 197
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
D WS+G I Y +L G PF D T + + + + AKD I RLL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 396 -DVEHRLGTLGSEQIKAHPWFK 416
D + R+ S Q HPW K
Sbjct: 258 KDPKKRMTIQDSLQ---HPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 136/322 (42%), Gaps = 62/322 (19%)
Query: 104 SVDDF-DLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLS--RG-QVEHVRAERNL 159
+VDD+ D +G G F V+ C+EK +G YA K +KK S RG E + E ++
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 160 LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
L E+ ++ L+ +++ + LI+E + GG++ A ++ Q + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 220 ESIHKHNYIHRDIKPDN-LLLDQN---GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
+H H D+KP+N +LLD+N +K+ DFGL +D
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID------------------ 169
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
G +K + GTP+++APE++ + G+E
Sbjct: 170 --------------FGNEFK------------------NIFGTPEFVAPEIVNYEPLGLE 197
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
D WS+G I Y +L G PF D T + + + + AKD I RLL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 396 -DVEHRLGTLGSEQIKAHPWFK 416
D + R+ S Q HPW K
Sbjct: 258 KDPKKRMTIQDSLQ---HPWIK 276
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 136/322 (42%), Gaps = 62/322 (19%)
Query: 104 SVDDF-DLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLS--RG-QVEHVRAERNL 159
+VDD+ D +G G F V+ C+EK +G YA K +KK S RG E + E ++
Sbjct: 8 NVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 160 LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
L E+ ++ L+ +++ + LI+E + GG++ A ++ Q + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 220 ESIHKHNYIHRDIKPDN-LLLDQN---GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
+H H D+KP+N +LLD+N +K+ DFGL +D
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID------------------ 169
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
G +K + GTP+++APE++ + G+E
Sbjct: 170 --------------FGNEFK------------------NIFGTPEFVAPEIVNYEPLGLE 197
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
D WS+G I Y +L G PF D T + + + + AKD I RLL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 396 -DVEHRLGTLGSEQIKAHPWFK 416
D + R+ S Q HPW K
Sbjct: 258 KDPKKRMTIQDSLQ---HPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 136/322 (42%), Gaps = 62/322 (19%)
Query: 104 SVDDF-DLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLS--RG-QVEHVRAERNL 159
+VDD+ D +G G F V+ C+EK +G YA K +KK S RG E + E ++
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 160 LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
L E+ ++ L+ +++ + LI+E + GG++ A ++ Q + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 220 ESIHKHNYIHRDIKPDN-LLLDQN---GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
+H H D+KP+N +LLD+N +K+ DFGL +D
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID------------------ 169
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
G +K + GTP+++APE++ + G+E
Sbjct: 170 --------------FGNEFK------------------NIFGTPEFVAPEIVNYEPLGLE 197
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
D WS+G I Y +L G PF D T + + + + AKD I RLL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 396 -DVEHRLGTLGSEQIKAHPWFK 416
D + R+ S Q HPW K
Sbjct: 258 KDPKKRMTIQDSLQ---HPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 136/322 (42%), Gaps = 62/322 (19%)
Query: 104 SVDDF-DLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLS--RG-QVEHVRAERNL 159
+VDD+ D +G G F V+ C+EK +G YA K +KK S RG E + E ++
Sbjct: 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66
Query: 160 LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
L E+ ++ L+ +++ + LI+E + GG++ A ++ Q + +
Sbjct: 67 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 126
Query: 220 ESIHKHNYIHRDIKPDN-LLLDQN---GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
+H H D+KP+N +LLD+N +K+ DFGL +D
Sbjct: 127 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID------------------ 168
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
G +K + GTP+++APE++ + G+E
Sbjct: 169 --------------FGNEFK------------------NIFGTPEFVAPEIVNYEPLGLE 196
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
D WS+G I Y +L G PF D T + + + + AKD I RLL
Sbjct: 197 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 256
Query: 396 -DVEHRLGTLGSEQIKAHPWFK 416
D + R+ S Q HPW K
Sbjct: 257 KDPKKRMTIQDSLQ---HPWIK 275
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 136/312 (43%), Gaps = 60/312 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+ ++ LL IG+G F +V+L + +G A+K + K+++ S + R R + +V
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVR--IMKVL 70
Query: 165 SH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
+H IVKL+ + + LYL+MEY GG+V AR Q V A++ H
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
+ +HRD+K +NLLLD + ++K++DFG N +D
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-----------------KLD--- 170
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLG 342
+ CG +P Y APE+ K Y G E D WSLG
Sbjct: 171 ----TFCG--------------------------SPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLG 402
I+Y ++ G PF + +++ K + F ++ + ++L+ + L + G
Sbjct: 201 VILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSKRG 256
Query: 403 TLGSEQIKAHPW 414
TL EQI W
Sbjct: 257 TL--EQIMKDRW 266
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 136/322 (42%), Gaps = 62/322 (19%)
Query: 104 SVDDF-DLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLS--RG-QVEHVRAERNL 159
+VDD+ D +G G F V+ C+EK +G YA K +KK S RG E + E ++
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 160 LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
L E+ ++ L+ +++ + LI+E + GG++ A ++ Q + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 220 ESIHKHNYIHRDIKPDN-LLLDQN---GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
+H H D+KP+N +LLD+N +K+ DFGL +D
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID------------------ 169
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
G +K + GTP+++APE++ + G+E
Sbjct: 170 --------------FGNEFK------------------NIFGTPEFVAPEIVNYEPLGLE 197
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
D WS+G I Y +L G PF D T + + + + AKD I RLL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 396 -DVEHRLGTLGSEQIKAHPWFK 416
D + R+ S Q HPW K
Sbjct: 258 KDPKKRMTIQDSLQ---HPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 136/322 (42%), Gaps = 62/322 (19%)
Query: 104 SVDDF-DLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLS--RG-QVEHVRAERNL 159
+VDD+ D +G G F V+ C+EK +G YA K +KK S RG E + E ++
Sbjct: 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66
Query: 160 LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
L E+ ++ L+ +++ + LI+E + GG++ A ++ Q + +
Sbjct: 67 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 126
Query: 220 ESIHKHNYIHRDIKPDN-LLLDQN---GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
+H H D+KP+N +LLD+N +K+ DFGL +D
Sbjct: 127 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID------------------ 168
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
G +K + GTP+++APE++ + G+E
Sbjct: 169 --------------FGNEFK------------------NIFGTPEFVAPEIVNYEPLGLE 196
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
D WS+G I Y +L G PF D T + + + + AKD I RLL
Sbjct: 197 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 256
Query: 396 -DVEHRLGTLGSEQIKAHPWFK 416
D + R+ S Q HPW K
Sbjct: 257 KDPKKRMTIQDSLQ---HPWIK 275
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 136/312 (43%), Gaps = 60/312 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+ ++ LL IG+G F +V+L + +G A+K + K+++ S + R R + +V
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVR--IMKVL 70
Query: 165 SH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
+H IVKL+ + + LYL+MEY GG+V AR Q V A++ H
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
+ +HRD+K +NLLLD + ++K++DFG N +D
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-----------------KLD--- 170
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLG 342
+ CG +P Y APE+ K Y G E D WSLG
Sbjct: 171 ----TFCG--------------------------SPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLG 402
I+Y ++ G PF + +++ K + F ++ + ++L+ + L + G
Sbjct: 201 VILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSKRG 256
Query: 403 TLGSEQIKAHPW 414
TL EQI W
Sbjct: 257 TL--EQIMKDRW 266
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 140/336 (41%), Gaps = 69/336 (20%)
Query: 97 RLKRHKIS-VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRA 155
+L R+ I D +++ IG G++ + C K + +A+K + KS+ ++E
Sbjct: 12 QLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIE---- 67
Query: 156 ERNLLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQ 214
+L H I+ L + D +Y+Y++ E + GG++ A +
Sbjct: 68 ---ILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFT 124
Query: 215 SVLAIESIHKHNYIHRDIKPDNLL-LDQNGH---MKLSDFGLCKPLDCTNLSAIXXXXXX 270
+E +H +HRD+KP N+L +D++G+ +++ DFG K L N
Sbjct: 125 ITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN---------- 174
Query: 271 XXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKK 330
L + T +++APEVL ++
Sbjct: 175 ---------------------------------------GLLMTPCYTANFVAPEVLERQ 195
Query: 331 GYGMECDWWSLGAIMYEMLVGYPPFYS---DDPVTTCRKIVHWKNHLKFPEEARLTPEAK 387
GY CD WSLG ++Y ML GY PF + D P +I K L ++ AK
Sbjct: 196 GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAK 255
Query: 388 DLICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKL 423
DL+ ++L H+ L + + HPW + WD+L
Sbjct: 256 DLVSKMLHVDPHQ--RLTAALVLRHPWI--VHWDQL 287
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 128/289 (44%), Gaps = 57/289 (19%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG+GA G V + +G A++++ + + E + E ++ E + IV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 85
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIK 233
S+ + L+++MEYL GG + +A + + A+E +H + IHR+IK
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV-CRECLQALEFLHSNQVIHRNIK 144
Query: 234 PDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRR 293
DN+LL +G +KL+DFG C
Sbjct: 145 SDNILLGMDGSVKLTDFGFCA--------------------------------------- 165
Query: 294 WKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 353
Q+ Q R + VGTP ++APEV+ +K YG + D WSLG + EM+ G P
Sbjct: 166 ------QITPEQSKRSTM----VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 215
Query: 354 PFYSDDPVTTCRKI-VHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHR 400
P+ +++P+ I + L+ PE +L+ +D + R L DVE R
Sbjct: 216 PYLNENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKR 262
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 134/313 (42%), Gaps = 62/313 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+ ++ LL IG+G F +V+L + +G A+K + K+++ S + R R + +V
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVR--IMKVL 70
Query: 165 SH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
+H IVKL+ + + LYL+MEY GG+V AR Q V A++ H
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTN-LSAIXXXXXXXXXXXXXSMDVD 282
+ +HRD+K +NLLLD + ++K++DFG N L A
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAF------------------ 172
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSL 341
CG P Y APE+ K Y G E D WSL
Sbjct: 173 -------CG--------------------------APPYAAPELFQGKKYDGPEVDVWSL 199
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRL 401
G I+Y ++ G PF + +++ K + F ++ + ++L+ + L +
Sbjct: 200 GVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSKR 255
Query: 402 GTLGSEQIKAHPW 414
GTL EQI W
Sbjct: 256 GTL--EQIMKDRW 266
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 135/322 (41%), Gaps = 62/322 (19%)
Query: 104 SVDDF-DLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLS--RG-QVEHVRAERNL 159
+VDD+ D +G G F V+ C+EK +G YA K +KK S RG E + E ++
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 160 LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
L E+ ++ L+ +++ + LI+E + GG++ A ++ Q + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 220 ESIHKHNYIHRDIKPDN-LLLDQN---GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
+H H D+KP+N +LLD+N +K+ DFGL +D
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----------------- 170
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
G +K+ GTP ++APE++ + G+E
Sbjct: 171 ---------------GNEFKN------------------IFGTPAFVAPEIVNYEPLGLE 197
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
D WS+G I Y +L G PF D T + + + + AKD I RLL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 396 -DVEHRLGTLGSEQIKAHPWFK 416
D + R+ S Q HPW K
Sbjct: 258 KDPKKRMTIQDSLQ---HPWIK 276
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 137/321 (42%), Gaps = 65/321 (20%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLS--RG-QVEHVRAERNLLAE 162
D +++ +G G F VR C++K +G YA K +KK + S RG E + E N+L E
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 163 VASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI 222
+ I+ L+ F++ + LI+E + GG++ A ++ Q + + +
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 131
Query: 223 HKHNYIHRDIKPDN-LLLDQN---GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
H H D+KP+N +LLD+N +KL DFG+ ++
Sbjct: 132 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA-------------------- 171
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
G +K+ GTP+++APE++ + G+E D
Sbjct: 172 ------------GNEFKN------------------IFGTPEFVAPEIVNYEPLGLEADM 201
Query: 339 WSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEE--ARLTPEAKDLICRLLC- 395
WS+G I Y +L G PF + T I + F EE + + AKD I RLL
Sbjct: 202 WSIGVITYILLSGASPFLGETKQETLTNISAV--NYDFDEEYFSNTSELAKDFIRRLLVK 259
Query: 396 DVEHRLGTLGSEQIKAHPWFK 416
D + R+ S + H W K
Sbjct: 260 DPKRRMXIAQSLE---HSWIK 277
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 137/314 (43%), Gaps = 60/314 (19%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE 162
+ + ++ LL IG+G F +V+L + +G A+K + K+++ S + R R + +
Sbjct: 4 LHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVR--IMK 61
Query: 163 VASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
V +H IVKL+ + + LYL+MEY GG+V AR Q V A++
Sbjct: 62 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQY 121
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H+ +HRD+K +NLLLD + ++K++DFG N +D
Sbjct: 122 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-----------------KLD- 163
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWS 340
+ CG +P Y APE+ K Y G E D WS
Sbjct: 164 ------TFCG--------------------------SPPYAAPELFQGKKYDGPEVDVWS 191
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
LG I+Y ++ G PF + +++ K + F ++ + ++L+ + L +
Sbjct: 192 LGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSK 247
Query: 401 LGTLGSEQIKAHPW 414
GTL EQI W
Sbjct: 248 RGTL--EQIMKDRW 259
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 136/312 (43%), Gaps = 60/312 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+ ++ LL IG+G F +V+L + +G A++ + K+++ S + R R + +V
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVR--IMKVL 70
Query: 165 SH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
+H IVKL+ + + LYL+MEY GG+V AR Q V A++ H
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
+ +HRD+K +NLLLD + ++K++DFG N +D
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-----------------KLD--- 170
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLG 342
+ CG +P Y APE+ K Y G E D WSLG
Sbjct: 171 ----TFCG--------------------------SPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLG 402
I+Y ++ G PF + +++ K + F ++ + ++L+ + L + G
Sbjct: 201 VILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSKRG 256
Query: 403 TLGSEQIKAHPW 414
TL EQI W
Sbjct: 257 TL--EQIMKDRW 266
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 139/318 (43%), Gaps = 66/318 (20%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
D +D+L +G GAFG V C EK +G ++ K + L + V++ E +++ ++
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKN---EISIMNQLHH 107
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIESIHK 224
++ L+ +F+D + LI+E+L GG++ Y+ Q+ ++ +H+
Sbjct: 108 PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE 167
Query: 225 HNYIHRDIKPDNLLLD--QNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
H+ +H DIKP+N++ + + +K+ DFGL
Sbjct: 168 HSIVHLDIKPENIMCETKKASSVKIIDFGLAT---------------------------- 199
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 342
++N ++ T T ++ APE++ ++ G D W++G
Sbjct: 200 ----------------------KLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIG 237
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKI--VHWKNHLKFPEEA--RLTPEAKDLICRLLCDVE 398
+ Y +L G PF +D + T + + W +F E+A ++PEAKD I LL
Sbjct: 238 VLGYVLLSGLSPFAGEDDLETLQNVKRCDW----EFDEDAFSSVSPEAKDFIKNLLQKEP 293
Query: 399 HRLGTLGSEQIKAHPWFK 416
+ T+ HPW K
Sbjct: 294 RKRLTV--HDALEHPWLK 309
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 60/312 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+ ++ LL IG+G F +V+L + +G A++ + K+++ S + R R + +V
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVR--IMKVL 70
Query: 165 SH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
+H IVKL+ + + LYL+MEY GG+V AR Q V A++ H
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
+ +HRD+K +NLLLD + ++K++DFG N +D
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-----------------KLD--- 170
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLG 342
CG +P Y APE+ K Y G E D WSLG
Sbjct: 171 ----EFCG--------------------------SPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLG 402
I+Y ++ G PF + +++ K + F ++ + ++L+ + L + G
Sbjct: 201 VILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSKRG 256
Query: 403 TLGSEQIKAHPW 414
TL EQI W
Sbjct: 257 TL--EQIMKDRW 266
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 135/322 (41%), Gaps = 62/322 (19%)
Query: 104 SVDDF-DLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLS--RG-QVEHVRAERNL 159
+VDD+ D +G G F V+ C+EK +G YA K +KK S RG E + E ++
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 160 LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
L E+ ++ L+ +++ + LI E + GG++ A ++ Q + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 220 ESIHKHNYIHRDIKPDN-LLLDQN---GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
+H H D+KP+N +LLD+N +K+ DFGL +D
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----------------- 170
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
G +K+ GTP+++APE++ + G+E
Sbjct: 171 ---------------GNEFKN------------------IFGTPEFVAPEIVNYEPLGLE 197
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC 395
D WS+G I Y +L G PF D T + + + + AKD I RLL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 396 -DVEHRLGTLGSEQIKAHPWFK 416
D + R+ S Q HPW K
Sbjct: 258 KDPKKRMTIQDSLQ---HPWIK 276
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 141/326 (43%), Gaps = 74/326 (22%)
Query: 104 SVDD-FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE 162
++DD F +G GAFG+V L +E+ SG +K + K S+ +E + AE +L
Sbjct: 19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVLKS 76
Query: 163 VASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIA----QSVLA 218
+ I+K++ F+D +Y++ME GG++ ++ Y+A Q + A
Sbjct: 77 LDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNA 136
Query: 219 IESIHKHNYIHRDIKPDNLLL-DQNGH--MKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
+ H + +H+D+KP+N+L D + H +K+ DF
Sbjct: 137 LAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDF------------------------- 171
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
G +KS +H + + GT Y+APEV K+ +
Sbjct: 172 -------------GLAELFKSD----EH--------STNAAGTALYMAPEVF-KRDVTFK 205
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEA----RLTPEAKDLIC 391
CD WS G +MY +L G PF T + V K K P A LTP+A DL+
Sbjct: 206 CDIWSAGVVMYFLLTGCLPF-----TGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLK 260
Query: 392 RLLC-DVEHRLGTLGSEQIKAHPWFK 416
++L D E R + Q+ H WFK
Sbjct: 261 QMLTKDPERR---PSAAQVLHHEWFK 283
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 134/312 (42%), Gaps = 60/312 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+ ++ LL IG+G F +V+L + +G A+K + K+++ S + R R + +V
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVR--IXKVL 70
Query: 165 SH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
+H IVKL+ + + LYL+ EY GG+V AR Q V A++ H
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCH 130
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
+ +HRD+K +NLLLD + ++K++DFG N +D
Sbjct: 131 QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGN-----------------KLD--- 170
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLG 342
+ CG P Y APE+ K Y G E D WSLG
Sbjct: 171 ----AFCG--------------------------APPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLG 402
I+Y ++ G PF + +++ K + F + + ++L+ + L + G
Sbjct: 201 VILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YXSTDCENLLKKFLILNPSKRG 256
Query: 403 TLGSEQIKAHPW 414
TL EQI W
Sbjct: 257 TL--EQIXKDRW 266
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 52/247 (21%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
S++ + L IG G+FG+ L + + G Y +K++ S M S+ + E R E +LA +
Sbjct: 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK-EREESRREVAVLANM 80
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF--YIAQSVLAIES 221
IV+ SF++ LY++M+Y GGD+ + + Q LA++
Sbjct: 81 KHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKH 140
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
+H +HRDIK N+ L ++G ++L DFG+ + L+ T
Sbjct: 141 VHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST---------------------- 178
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 341
+LA + +GTP Y++PE+ K Y + D W+L
Sbjct: 179 ---------------------------VELARACIGTPYYLSPEICENKPYNNKSDIWAL 211
Query: 342 GAIMYEM 348
G ++YE+
Sbjct: 212 GCVLYEL 218
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 125/301 (41%), Gaps = 64/301 (21%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D+++L IG G++G + + K G I K+L M + + + + +E NLL E+
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELK 63
Query: 165 SHCIVKLYYSFQD--AEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYI----AQSVLA 218
IV+ Y D LY++MEY GGD+ + ++ Q LA
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 219 IESIHK-----HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXX 273
++ H+ H +HRD+KP N+ LD ++KL DFGL + L+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN---------------- 167
Query: 274 XXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYG 333
+ A + VGTP Y++PE + + Y
Sbjct: 168 ---------------------------------HDTSFAKTFVGTPYYMSPEQMNRMSYN 194
Query: 334 MECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRL 393
+ D WSLG ++YE+ PPF + KI K + P R + E ++I R+
Sbjct: 195 EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR-RIP--YRYSDELNEIITRM 251
Query: 394 L 394
L
Sbjct: 252 L 252
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 137/336 (40%), Gaps = 69/336 (20%)
Query: 97 RLKRHKIS-VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRA 155
+L R+ I D +++ IG G++ + C K + +A+K + KS+ ++E
Sbjct: 12 QLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIE---- 67
Query: 156 ERNLLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQ 214
+L H I+ L + D +Y+Y++ E GG++ A +
Sbjct: 68 ---ILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFT 124
Query: 215 SVLAIESIHKHNYIHRDIKPDNLL-LDQNGH---MKLSDFGLCKPLDCTNLSAIXXXXXX 270
+E +H +HRD+KP N+L +D++G+ +++ DFG K L N
Sbjct: 125 ITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN---------- 174
Query: 271 XXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKK 330
L + T +++APEVL ++
Sbjct: 175 ---------------------------------------GLLXTPCYTANFVAPEVLERQ 195
Query: 331 GYGMECDWWSLGAIMYEMLVGYPPFYS---DDPVTTCRKIVHWKNHLKFPEEARLTPEAK 387
GY CD WSLG ++Y L GY PF + D P +I K L ++ AK
Sbjct: 196 GYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAK 255
Query: 388 DLICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKL 423
DL+ + L H+ L + + HPW + WD+L
Sbjct: 256 DLVSKXLHVDPHQ--RLTAALVLRHPWI--VHWDQL 287
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 125/301 (41%), Gaps = 64/301 (21%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D+++L IG G++G + + K G I K+L M + + + + +E NLL E+
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELK 63
Query: 165 SHCIVKLYYSFQD--AEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYI----AQSVLA 218
IV+ Y D LY++MEY GGD+ + ++ Q LA
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 219 IESIHK-----HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXX 273
++ H+ H +HRD+KP N+ LD ++KL DFGL + L+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN---------------- 167
Query: 274 XXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYG 333
+ A + VGTP Y++PE + + Y
Sbjct: 168 ---------------------------------HDTSFAKAFVGTPYYMSPEQMNRMSYN 194
Query: 334 MECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRL 393
+ D WSLG ++YE+ PPF + KI K + P R + E ++I R+
Sbjct: 195 EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR-RIP--YRYSDELNEIITRM 251
Query: 394 L 394
L
Sbjct: 252 L 252
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 124/301 (41%), Gaps = 64/301 (21%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+D+++L IG G++G + + K G I K+L M + + + + +E NLL E+
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELK 63
Query: 165 SHCIVKLYYSFQD--AEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYI----AQSVLA 218
IV+ Y D LY++MEY GGD+ + ++ Q LA
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 219 IESIHK-----HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXX 273
++ H+ H +HRD+KP N+ LD ++KL DFGL + L+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN---------------- 167
Query: 274 XXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYG 333
+ A VGTP Y++PE + + Y
Sbjct: 168 ---------------------------------HDEDFAKEFVGTPYYMSPEQMNRMSYN 194
Query: 334 MECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRL 393
+ D WSLG ++YE+ PPF + KI K + P R + E ++I R+
Sbjct: 195 EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR-RIP--YRYSDELNEIITRM 251
Query: 394 L 394
L
Sbjct: 252 L 252
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 135/322 (41%), Gaps = 63/322 (19%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRG--QVEHVRAERNLLAEV 163
D ++L +IG+G F VR C +++G +A+K + ++ S E ++ E ++ +
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGD----VXXXXXXXXXXXXXVARFYIAQSVLAI 219
IV+L ++ LY++ E++ G D + VA Y+ Q + A+
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 145
Query: 220 ESIHKHNYIHRDIKPDNLLL---DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXX 276
H +N IHRD+KP +LL + + +KL FG+ L + L A
Sbjct: 146 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVA------------- 192
Query: 277 XSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMEC 336
GR VGTP ++APEV+ ++ YG
Sbjct: 193 -----GGR-------------------------------VGTPHFMAPEVVKREPYGKPV 216
Query: 337 DWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICR-LLC 395
D W G I++ +L G PFY I+ K + + + ++ AKDL+ R L+
Sbjct: 217 DVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLML 275
Query: 396 DVEHRLGTLGSEQIKAHPWFKD 417
D R+ + HPW K+
Sbjct: 276 DPAERITVY---EALNHPWLKE 294
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 135/322 (41%), Gaps = 63/322 (19%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRG--QVEHVRAERNLLAEV 163
D ++L +IG+G F VR C +++G +A+K + ++ S E ++ E ++ +
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGD----VXXXXXXXXXXXXXVARFYIAQSVLAI 219
IV+L ++ LY++ E++ G D + VA Y+ Q + A+
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 220 ESIHKHNYIHRDIKPDNLLL---DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXX 276
H +N IHRD+KP +LL + + +KL FG+ L + L A
Sbjct: 144 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVA------------- 190
Query: 277 XSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMEC 336
GR VGTP ++APEV+ ++ YG
Sbjct: 191 -----GGR-------------------------------VGTPHFMAPEVVKREPYGKPV 214
Query: 337 DWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICR-LLC 395
D W G I++ +L G PFY I+ K + + + ++ AKDL+ R L+
Sbjct: 215 DVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLML 273
Query: 396 DVEHRLGTLGSEQIKAHPWFKD 417
D R+ + HPW K+
Sbjct: 274 DPAERITVY---EALNHPWLKE 292
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 113/268 (42%), Gaps = 52/268 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
V+D+DL+ +G GA+GEV+L + + A+K + + E+++ E + A +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINAMLN 63
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VK Y ++ YL +EY GG++ A+ + Q + + +H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
HRDIKP+NLLLD+ ++K+SDFGL N
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN------------------------ 159
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGA 343
R +L GT Y+APE+L ++ + E D WS G
Sbjct: 160 -----------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWK 371
++ ML G P+ D P +C++ WK
Sbjct: 197 VLTAMLAGELPW--DQPSDSCQEYSDWK 222
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 110/270 (40%), Gaps = 55/270 (20%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
++ +F + IGRG F EV G A+KK++ +++ E +LL ++
Sbjct: 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL 89
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF----YIAQSVLAI 219
++K Y SF + L +++E GD+ + Y Q A+
Sbjct: 90 NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
E +H +HRDIKP N+ + G +KL D GL
Sbjct: 150 EHMHSRRVMHRDIKPANVFITATGVVKLGDLGL--------------------------- 182
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWW 339
GRF S + A+S VGTP Y++PE + + GY + D W
Sbjct: 183 ---GRFFSS-------------------KTTAAHSLVGTPYYMSPERIHENGYNFKSDIW 220
Query: 340 SLGAIMYEMLVGYPPFYSD--DPVTTCRKI 367
SLG ++YEM PFY D + + C+KI
Sbjct: 221 SLGCLLYEMAALQSPFYGDKMNLYSLCKKI 250
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 52/268 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
V+D+DL+ +G GA+GEV+L + + A+K + + E+++ E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEIXINKMLN 62
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VK Y ++ YL +EY GG++ A+ + Q + + +H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
HRDIKP+NLLLD+ ++K+SDFGL
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------- 157
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGA 343
NR +L GT Y+APE+L ++ + E D WS G
Sbjct: 158 ----------------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWK 371
++ ML G P+ D P +C++ WK
Sbjct: 196 VLTAMLAGELPW--DQPSDSCQEYSDWK 221
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 152/368 (41%), Gaps = 100/368 (27%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEM--LSRGQVEHVRAERNLLAEVAS 165
+ L IG+G++G VR+ E ++ I A+K + K+++ ++ VE ++ E L+ ++
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH 87
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-------- 217
I +LY ++D +Y+ L+ME GG + + ++ +
Sbjct: 88 PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNE 147
Query: 218 -AIE-SIHK----------------------------HN--YIHRDIKPDNLLLDQNG-- 243
AI SIH HN HRDIKP+N L N
Sbjct: 148 EAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSF 207
Query: 244 HMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQH 303
+KL DFGL K +
Sbjct: 208 EIKLVDFGLSK-----------------------------------------------EF 220
Query: 304 WQINRRKLAYSTV--GTPDYIAPEVL--LKKGYGMECDWWSLGAIMYEMLVGYPPFYSDD 359
+++N + T GTP ++APEVL + YG +CD WS G +++ +L+G PF +
Sbjct: 221 YKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVN 280
Query: 360 PVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLC-DVEHRLGTLGSEQIKAHPWFKDI 418
T ++++ K + P L+P A+DL+ LL +V+ R + + Q HPW
Sbjct: 281 DADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ---HPWISQF 337
Query: 419 AWDKLYEM 426
+ DK+Y+M
Sbjct: 338 S-DKIYKM 344
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 137/334 (41%), Gaps = 71/334 (21%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLY 172
++G GA+ +V+ ++G YA+K ++K SR +V R L + I++L
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRV--FREVETLYQCQGNKNILELI 77
Query: 173 YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDI 232
F+D YL+ E L GG + A + A++ +H HRD+
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDL 137
Query: 233 KPDNLLLD---QNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESG 289
KP+N+L + + +K+ DF L G
Sbjct: 138 KPENILCESPEKVSPVKICDFDL------------------------------------G 161
Query: 290 CGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVL-----LKKGYGMECDWWSLGAI 344
G + + + ++ + G+ +Y+APEV+ Y CD WSLG +
Sbjct: 162 SGMKLNNSCTPITTPELT------TPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVV 215
Query: 345 MYEMLVGYPPFYSD-------DPVTTCRKIVH------WKNHLKFPEE--ARLTPEAKDL 389
+Y ML GYPPF D CR + + +FP++ A ++ EAKDL
Sbjct: 216 LYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDL 275
Query: 390 ICRLLC-DVEHRLGTLGSEQIKAHPWFKDIAWDK 422
I +LL D + R L + Q+ HPW + A +K
Sbjct: 276 ISKLLVRDAKQR---LSAAQVLQHPWVQGQAPEK 306
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 52/268 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
V+D+DL+ +G GA+GEV+L + + A+K + + E+++ E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEIXINKMLN 62
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VK Y ++ YL +EY GG++ A+ + Q + + +H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
HRDIKP+NLLLD+ ++K+SDFGL
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------- 157
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGA 343
NR +L GT Y+APE+L ++ + E D WS G
Sbjct: 158 ----------------------NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWK 371
++ ML G P+ D P +C++ WK
Sbjct: 196 VLTAMLAGELPW--DQPSDSCQEYSDWK 221
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 110/252 (43%), Gaps = 52/252 (20%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+ ++ L IG+G F +V+L + +G A+K + K++ L+ ++ + E ++ +
Sbjct: 14 IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQ-LNPTSLQKLFREVRIMKILN 72
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
IVKL+ + + LYL+MEY GG+V AR Q V A++ H+
Sbjct: 73 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 132
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+HRD+K +NLLLD + ++K++DFG N +D
Sbjct: 133 KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGN-----------------KLD---- 171
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGA 343
+ CG +P Y APE+ K Y G E D WSLG
Sbjct: 172 ---TFCG--------------------------SPPYAAPELFQGKKYDGPEVDVWSLGV 202
Query: 344 IMYEMLVGYPPF 355
I+Y ++ G PF
Sbjct: 203 ILYTLVSGSLPF 214
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 52/268 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
V+D+DL+ +G GA+GEV+L + + A+K + + E+++ E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEIXINKMLN 63
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VK Y ++ YL +EY GG++ A+ + Q + + +H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
HRDIKP+NLLLD+ ++K+SDFGL
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------- 158
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGA 343
NR +L GT Y+APE+L ++ + E D WS G
Sbjct: 159 ----------------------NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWK 371
++ ML G P+ D P +C++ WK
Sbjct: 197 VLTAMLAGELPW--DQPSDSCQEYSDWK 222
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 52/268 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
V+D+DL+ +G GA+GEV+L + + A+K + + E+++ E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLN 62
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VK Y ++ YL +EY GG++ A+ + Q + + +H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
HRDIKP+NLLLD+ ++K+SDFGL N
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN------------------------ 158
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGA 343
R +L GT Y+APE+L ++ + E D WS G
Sbjct: 159 -----------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWK 371
++ ML G P+ D P +C++ WK
Sbjct: 196 VLTAMLAGELPW--DQPSDSCQEYSDWK 221
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 52/268 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
V+D+DL+ +G GA+GEV+L + + A+K + + E+++ E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLN 63
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VK Y ++ YL +EY GG++ A+ + Q + + +H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
HRDIKP+NLLLD+ ++K+SDFGL N
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN------------------------ 159
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGA 343
R +L GT Y+APE+L ++ + E D WS G
Sbjct: 160 -----------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWK 371
++ ML G P+ D P +C++ WK
Sbjct: 197 VLTAMLAGELPW--DQPSDSCQEYSDWK 222
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 122/302 (40%), Gaps = 70/302 (23%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
FD+L +G G++G V K++G I A+K++ ++ + E +++ + S
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP-----VESDLQEIIKEISIMQQCDSPH 85
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-AIESIHKHN 226
+VK Y S+ L+++MEY G V I QS L +E +H
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR 145
Query: 227 YIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFP 286
IHRDIK N+LL+ GH KL+DFG V G+
Sbjct: 146 KIHRDIKAGNILLNTEGHAKLADFG-----------------------------VAGQLT 176
Query: 287 ESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 346
+ R +GTP ++APEV+ + GY D WSLG
Sbjct: 177 DXMAKRN--------------------XVIGTPFWMAPEVIQEIGYNCVADIWSLGITAI 216
Query: 347 EMLVGYPPFYSD------------DPVTTCRKIVHWK-NHLKFPEEARL-TPEAKDLICR 392
EM G PP Y+D +P T RK W N F ++ + +PE + +
Sbjct: 217 EMAEGKPP-YADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQ 275
Query: 393 LL 394
LL
Sbjct: 276 LL 277
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 132/320 (41%), Gaps = 60/320 (18%)
Query: 100 RHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL 159
+H +D +D+ +G GAFG V E+ +GN +A K + + E VR E
Sbjct: 45 KHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK---ETVRKEIQT 101
Query: 160 LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDV-XXXXXXXXXXXXXVARFYIAQSVLA 218
++ + +V L+ +F+D + +I E++ GG++ A Y+ Q
Sbjct: 102 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKG 161
Query: 219 IESIHKHNYIHRDIKPDNLLLD--QNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXX 276
+ +H++NY+H D+KP+N++ ++ +KL DFGL LD
Sbjct: 162 LCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD------------------- 202
Query: 277 XSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMEC 336
P + ++ T GT ++ APEV K G
Sbjct: 203 --------------------PKQSVK-----------VTTGTAEFAAPEVAEGKPVGYYT 231
Query: 337 DWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICR-LLC 395
D WS+G + Y +L G PF ++ T R + ++ + ++ + KD I + LL
Sbjct: 232 DMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLA 291
Query: 396 DVEHRLGTLGSEQIKAHPWF 415
D R+ Q HPW
Sbjct: 292 DPNTRMTI---HQALEHPWL 308
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 132/320 (41%), Gaps = 60/320 (18%)
Query: 100 RHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL 159
+H +D +D+ +G GAFG V E+ +GN +A K + + E VR E
Sbjct: 151 KHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK---ETVRKEIQT 207
Query: 160 LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDV-XXXXXXXXXXXXXVARFYIAQSVLA 218
++ + +V L+ +F+D + +I E++ GG++ A Y+ Q
Sbjct: 208 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKG 267
Query: 219 IESIHKHNYIHRDIKPDNLLLD--QNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXX 276
+ +H++NY+H D+KP+N++ ++ +KL DFGL LD
Sbjct: 268 LCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD------------------- 308
Query: 277 XSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMEC 336
P + ++ T GT ++ APEV K G
Sbjct: 309 --------------------PKQSVK-----------VTTGTAEFAAPEVAEGKPVGYYT 337
Query: 337 DWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICR-LLC 395
D WS+G + Y +L G PF ++ T R + ++ + ++ + KD I + LL
Sbjct: 338 DMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLA 397
Query: 396 DVEHRLGTLGSEQIKAHPWF 415
D R+ Q HPW
Sbjct: 398 DPNTRMTI---HQALEHPWL 414
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 52/268 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
V+D+DL+ +G GA+GEV+L + + A+K + + E+++ E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLN 63
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VK Y ++ YL +EY GG++ A+ + Q + + +H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
HRDIKP+NLLLD+ ++K+SDFGL N
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN------------------------ 159
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGA 343
R +L GT Y+APE+L ++ + E D WS G
Sbjct: 160 -----------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWK 371
++ ML G P+ D P +C++ WK
Sbjct: 197 VLTAMLAGELPW--DQPSDSCQEYSDWK 222
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 52/268 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
V+D+DL+ +G GA+GEV+L + + A+K + + E+++ E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLN 63
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VK Y ++ YL +EY GG++ A+ + Q + + +H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
HRDIKP+NLLLD+ ++K+SDFGL N
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN------------------------ 159
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGA 343
R +L GT Y+APE+L ++ + E D WS G
Sbjct: 160 -----------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWK 371
++ ML G P+ D P +C++ WK
Sbjct: 197 VLTAMLAGELPW--DQPSDSCQEYSDWK 222
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 52/268 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
V+D+DL+ +G GA+GEV+L + + A+K + + E+++ E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLN 63
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VK Y ++ YL +EY GG++ A+ + Q + + +H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
HRDIKP+NLLLD+ ++K+SDFGL N
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN------------------------ 159
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGA 343
R +L GT Y+APE+L ++ + E D WS G
Sbjct: 160 -----------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWK 371
++ ML G P+ D P +C++ WK
Sbjct: 197 VLTAMLAGELPW--DQPSDSCQEYSDWK 222
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 52/268 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
V+D+DL+ +G GA+GEV+L + + A+K + + E+++ E + +
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLN 61
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VK Y ++ YL +EY GG++ A+ + Q + + +H
Sbjct: 62 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 121
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
HRDIKP+NLLLD+ ++K+SDFGL N
Sbjct: 122 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN------------------------ 157
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGA 343
R +L GT Y+APE+L ++ + E D WS G
Sbjct: 158 -----------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 194
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWK 371
++ ML G P+ D P +C++ WK
Sbjct: 195 VLTAMLAGELPW--DQPSDSCQEYSDWK 220
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 52/268 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
V+D+DL+ +G GA+GEV+L + + A+K + + E+++ E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLN 62
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VK Y ++ YL +EY GG++ A+ + Q + + +H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
HRDIKP+NLLLD+ ++K+SDFGL
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------- 157
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGA 343
NR +L GT Y+APE+L ++ + E D WS G
Sbjct: 158 ----------------------NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWK 371
++ ML G P+ D P +C++ WK
Sbjct: 196 VLTAMLAGELPW--DQPSDSCQEYSDWK 221
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 52/268 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
V+D+DL+ +G GA+GEV+L + + A+K + + E+++ E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLN 62
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VK Y ++ YL +EY GG++ A+ + Q + + +H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
HRDIKP+NLLLD+ ++K+SDFGL N
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN------------------------ 158
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGA 343
R +L GT Y+APE+L ++ + E D WS G
Sbjct: 159 -----------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWK 371
++ ML G P+ D P +C++ WK
Sbjct: 196 VLTAMLAGELPW--DQPSDSCQEYSDWK 221
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 52/268 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
V+D+DL+ +G GA+GEV+L + + A+K + + E+++ E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VK Y ++ YL +EY GG++ A+ + Q + + +H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
HRDIKP+NLLLD+ ++K+SDFGL N
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN------------------------ 158
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGA 343
R +L GT Y+APE+L ++ + E D WS G
Sbjct: 159 -----------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWK 371
++ ML G P+ D P +C++ WK
Sbjct: 196 VLTAMLAGELPW--DQPSDSCQEYSDWK 221
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 52/268 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
V+D+DL+ +G GA+GEV+L + + A+K + + E+++ E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLN 63
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VK Y ++ YL +EY GG++ A+ + Q + + +H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
HRDIKP+NLLLD+ ++K+SDFGL N
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN------------------------ 159
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGA 343
R +L GT Y+APE+L ++ + E D WS G
Sbjct: 160 -----------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWK 371
++ ML G P+ D P +C++ WK
Sbjct: 197 VLTAMLAGELPW--DQPSDSCQEYSDWK 222
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 52/268 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
V+D+DL+ +G GA+GEV+L + + A+K + + E+++ E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLN 62
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VK Y ++ YL +EY GG++ A+ + Q + + +H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
HRDIKP+NLLLD+ ++K+SDFGL N
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN------------------------ 158
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGA 343
R +L GT Y+APE+L ++ + E D WS G
Sbjct: 159 -----------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWK 371
++ ML G P+ D P +C++ WK
Sbjct: 196 VLTAMLAGELPW--DQPSDSCQEYSDWK 221
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 52/268 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
V+D+DL+ +G GA+GEV+L + + A+K + + E+++ E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLN 62
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VK Y ++ YL +EY GG++ A+ + Q + + +H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
HRDIKP+NLLLD+ ++K+SDFGL N
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN------------------------ 158
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGA 343
R +L GT Y+APE+L ++ + E D WS G
Sbjct: 159 -----------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWK 371
++ ML G P+ D P +C++ WK
Sbjct: 196 VLTAMLAGELPW--DQPSDSCQEYSDWK 221
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 52/268 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
V+D+DL+ +G GA+GEV+L + + A+K + + E+++ E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VK Y ++ YL +EY GG++ A+ + Q + + +H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
HRDIKP+NLLLD+ ++K+SDFGL
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------- 157
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGA 343
NR +L GT Y+APE+L ++ + E D WS G
Sbjct: 158 ----------------------NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWK 371
++ ML G P+ D P +C++ WK
Sbjct: 196 VLTAMLAGELPW--DQPSDSCQEYSDWK 221
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 52/268 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
V+D+DL+ +G GA+GEV+L + + A+K + + E+++ E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 63
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VK Y ++ YL +EY GG++ A+ + Q + + +H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
HRDIKP+NLLLD+ ++K+SDFGL N
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN------------------------ 159
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGA 343
R +L GT Y+APE+L ++ + E D WS G
Sbjct: 160 -----------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWK 371
++ ML G P+ D P +C++ WK
Sbjct: 197 VLTAMLAGELPW--DQPSDSCQEYSDWK 222
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 52/268 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
V+D+DL+ +G GA+GEV+L + + A+K + + E+++ E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VK Y ++ YL +EY GG++ A+ + Q + + +H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
HRDIKP+NLLLD+ ++K+SDFGL N
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN------------------------ 158
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGA 343
R +L GT Y+APE+L ++ + E D WS G
Sbjct: 159 -----------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWK 371
++ ML G P+ D P +C++ WK
Sbjct: 196 VLTAMLAGELPW--DQPSDSCQEYSDWK 221
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 111/268 (41%), Gaps = 52/268 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
V+D+DL+ +G GA GEV+L + + A+K + + E+++ E + +
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLN 62
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VK Y ++ YL +EY GG++ A+ + Q + + +H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
HRDIKP+NLLLD+ ++K+SDFGL N
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN------------------------ 158
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGA 343
R +L GT Y+APE+L ++ + E D WS G
Sbjct: 159 -----------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWK 371
++ ML G P+ D P +C++ WK
Sbjct: 196 VLTAMLAGELPW--DQPSDSCQEYSDWK 221
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 90/172 (52%), Gaps = 16/172 (9%)
Query: 95 YMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQV---- 150
Y+R K KI F + + G GA+GEV LC+EK + A+K +KKS+ +G+
Sbjct: 26 YVRKKEGKIGESYFKVRKL-GSGAYGEVLLCKEKNGHSEKAIKVIKKSQ-FDKGRYSDDN 83
Query: 151 -------EHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXX 203
E + E +LL + I+KL+ F+D +Y YL+ E+ GG++
Sbjct: 84 KNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF 143
Query: 204 XXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNG---HMKLSDFGL 252
A + Q + I +HKHN +HRDIKP+N+LL+ ++K+ DFGL
Sbjct: 144 DECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGL 195
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 316 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLK 375
+GT YIAPEVL KK Y +CD WS G IMY +L GYPPF + +K+ K +
Sbjct: 209 LGTAYYIAPEVL-KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFD 267
Query: 376 FPEEARLTPEAKDLICRLL 394
F + ++ EAK+LI +L
Sbjct: 268 FNDWKNISDEAKELIKLML 286
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 111/268 (41%), Gaps = 52/268 (19%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
V+D+DL+ +G GA+GEV+L + + A+K + + E+++ E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLN 62
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
+VK Y ++ YL +EY GG++ A+ + Q + + +H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
HRDIKP+NLLLD+ ++K+SDFGL
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------- 157
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGA 343
NR +L GT Y+APE+L ++ + E D WS G
Sbjct: 158 ----------------------NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIVHWK 371
++ ML G P+ D P + ++ WK
Sbjct: 196 VLTAMLAGELPW--DQPSDSXQEYSDWK 221
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 139/343 (40%), Gaps = 81/343 (23%)
Query: 106 DDFDLLTI--IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAE---RNLL 160
++F +LT +GRG F VR C K +G YA K LKK RGQ RAE +
Sbjct: 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRR---RGQ--DCRAEILHEIAV 81
Query: 161 AEVASHC--IVKLYYSFQDAEYLYLIMEYLPGGDVXXX---XXXXXXXXXXVARFYIAQS 215
E+A C ++ L+ +++ + LI+EY GG++ V R I Q
Sbjct: 82 LELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRL-IKQI 140
Query: 216 VLAIESIHKHNYIHRDIKPDNLLLDQN---GHMKLSDFGLCKPLDCTNLSAIXXXXXXXX 272
+ + +H++N +H D+KP N+LL G +K+ DFG+ + +
Sbjct: 141 LEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG--------------- 185
Query: 273 XXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY 332
C R +GTP+Y+APE+L
Sbjct: 186 ---------------HACELR--------------------EIMGTPEYLAPEILNYDPI 210
Query: 333 GMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEE--ARLTPEAKDLI 390
D W++G I Y +L PF +D T I + ++ + EE + ++ A D I
Sbjct: 211 TTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNIS--QVNVDYSEETFSSVSQLATDFI 268
Query: 391 CRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPE 433
LL + T +E +H W + WD E + PE
Sbjct: 269 QSLLVKNPEKRPT--AEICLSHSWLQQ--WD----FENLFHPE 303
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 104/247 (42%), Gaps = 52/247 (21%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
F L IG+G+FGEV + ++ + A+K + E ++E ++ E +L++ S
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSSY 82
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNY 227
+ K Y S+ L++IMEYL GG +A + + + ++ +H
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATM-LKEILKGLDYLHSEKK 141
Query: 228 IHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPE 287
IHRDIK N+LL + G +KL+DFG+
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAG--------------------------------- 168
Query: 288 SGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 347
QL QI R VGTP ++APEV+ + Y + D WSLG E
Sbjct: 169 ------------QLTDTQIKRNTF----VGTPFWMAPEVIQQSAYDSKADIWSLGITAIE 212
Query: 348 MLVGYPP 354
+ G PP
Sbjct: 213 LAKGEPP 219
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 110/262 (41%), Gaps = 57/262 (21%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSE---MLSRGQVEHVRAERNLL 160
S++ ++ L ++G G++G V C+ K +G I A+KK +S+ M+ + + ++ LL
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIK----LL 78
Query: 161 AEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIE 220
++ +V L + + YL+ E++ + V + Y+ Q + I
Sbjct: 79 KQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIG 138
Query: 221 SIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMD 280
H HN IHRDIKP+N+L+ Q+G +KL DFG + L
Sbjct: 139 FCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP--------------------- 177
Query: 281 VDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKK-GYGMECDWW 339
G + RW Y APE+L+ YG D W
Sbjct: 178 --GEVYDDEVATRW--------------------------YRAPELLVGDVKYGKAVDVW 209
Query: 340 SLGAIMYEMLVGYPPFYSDDPV 361
++G ++ EM +G P F D +
Sbjct: 210 AIGCLVTEMFMGEPLFPGDSDI 231
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 135/326 (41%), Gaps = 75/326 (23%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
F+L+ ++G G +G+V + K+G + A+K + ++ + E ++ E N+L + + H
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINMLKKYSHHR 81
Query: 168 IVKLYY-SFQDA------EYLYLIMEYLPGG---DVXXXXXXXXXXXXXVARFYIAQSVL 217
+ YY +F + L+L+ME+ G D+ +A YI + +L
Sbjct: 82 NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIA--YICREIL 139
Query: 218 -AIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXX 276
+ +H+H IHRDIK N+LL +N +KL DFG+ LD T
Sbjct: 140 RGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT----------------- 182
Query: 277 XSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-----KKG 331
GRR + +GTP ++APEV+
Sbjct: 183 -------------VGRR-------------------NTFIGTPYWMAPEVIACDENPDAT 210
Query: 332 YGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLIC 391
Y + D WSLG EM G PP P+ I +N + + + + + I
Sbjct: 211 YDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP--RNPAPRLKSKKWSKKFQSFIE 268
Query: 392 RLLCDVEHRLGTLGSEQIKAHPWFKD 417
C V++ +EQ+ HP+ +D
Sbjct: 269 S--CLVKNHSQRPATEQLMKHPFIRD 292
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 105/247 (42%), Gaps = 52/247 (21%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
F L IG+G+FGEV + ++ + A+K + E ++E ++ E +L++ S
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSPY 86
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNY 227
+ K Y S+ L++IMEYL GG +A + + + ++ +H
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATI-LREILKGLDYLHSEKK 145
Query: 228 IHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPE 287
IHRDIK N+LL ++G +KL+DFG+
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAG--------------------------------- 172
Query: 288 SGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 347
QL QI R VGTP ++APEV+ + Y + D WSLG E
Sbjct: 173 ------------QLTDTQIKRNTF----VGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 216
Query: 348 MLVGYPP 354
+ G PP
Sbjct: 217 LARGEPP 223
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 105/247 (42%), Gaps = 52/247 (21%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
F L IG+G+FGEV + ++ + A+K + E ++E ++ E +L++ S
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSPY 66
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNY 227
+ K Y S+ L++IMEYL GG +A + + + ++ +H
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATI-LREILKGLDYLHSEKK 125
Query: 228 IHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPE 287
IHRDIK N+LL ++G +KL+DFG+
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAG--------------------------------- 152
Query: 288 SGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 347
QL QI R VGTP ++APEV+ + Y + D WSLG E
Sbjct: 153 ------------QLTDTQIKRNTF----VGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 196
Query: 348 MLVGYPP 354
+ G PP
Sbjct: 197 LARGEPP 203
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 105/247 (42%), Gaps = 52/247 (21%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
F L IG+G+FGEV + ++ + A+K + E ++E ++ E +L++ S
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSPY 81
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNY 227
+ K Y S+ L++IMEYL GG +A + + + ++ +H
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATI-LREILKGLDYLHSEKK 140
Query: 228 IHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPE 287
IHRDIK N+LL ++G +KL+DFG+
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAG--------------------------------- 167
Query: 288 SGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 347
QL QI R VGTP ++APEV+ + Y + D WSLG E
Sbjct: 168 ------------QLTDTQIKRNXF----VGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 211
Query: 348 MLVGYPP 354
+ G PP
Sbjct: 212 LARGEPP 218
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 105/247 (42%), Gaps = 52/247 (21%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
F L IG+G+FGEV + ++ + A+K + E ++E ++ E +L++ S
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSPY 66
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNY 227
+ K Y S+ L++IMEYL GG +A + + + ++ +H
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATI-LREILKGLDYLHSEKK 125
Query: 228 IHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPE 287
IHRDIK N+LL ++G +KL+DFG+
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAG--------------------------------- 152
Query: 288 SGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 347
QL QI R VGTP ++APEV+ + Y + D WSLG E
Sbjct: 153 ------------QLTDTQIKRNXF----VGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 196
Query: 348 MLVGYPP 354
+ G PP
Sbjct: 197 LARGEPP 203
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 121/294 (41%), Gaps = 73/294 (24%)
Query: 112 TIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH----- 166
++G+G +G V ++ + A+K++ + + R + L E+A H
Sbjct: 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS---------RYSQPLHEEIALHKHLKH 78
Query: 167 -CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXX---XXXXXXVARFYIAQSVLAIESI 222
IV+ SF + ++ + ME +PGG + FY Q + ++ +
Sbjct: 79 KNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYL 138
Query: 223 HKHNYIHRDIKPDNLLLDQ-NGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H + +HRDIK DN+L++ +G +K+SDFG K L N
Sbjct: 139 HDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN--------------------- 177
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK--KGYGMECDWW 339
P + + GT Y+APE++ K +GYG D W
Sbjct: 178 ---------------PCTE-------------TFTGTLQYMAPEIIDKGPRGYGKAADIW 209
Query: 340 SLGAIMYEMLVGYPPFYS-DDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICR 392
SLG + EM G PPFY +P K+ +K H + PE ++ EAK I +
Sbjct: 210 SLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPES--MSAEAKAFILK 261
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 121/294 (41%), Gaps = 73/294 (24%)
Query: 112 TIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH----- 166
++G+G +G V ++ + A+K++ + + R + L E+A H
Sbjct: 14 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS---------RYSQPLHEEIALHKHLKH 64
Query: 167 -CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXX---XXXXXXVARFYIAQSVLAIESI 222
IV+ SF + ++ + ME +PGG + FY Q + ++ +
Sbjct: 65 KNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYL 124
Query: 223 HKHNYIHRDIKPDNLLLDQ-NGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H + +HRDIK DN+L++ +G +K+SDFG K L N
Sbjct: 125 HDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN--------------------- 163
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK--KGYGMECDWW 339
P + + GT Y+APE++ K +GYG D W
Sbjct: 164 ---------------PCTE-------------TFTGTLQYMAPEIIDKGPRGYGKAADIW 195
Query: 340 SLGAIMYEMLVGYPPFYS-DDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICR 392
SLG + EM G PPFY +P K+ +K H + PE ++ EAK I +
Sbjct: 196 SLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPES--MSAEAKAFILK 247
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 104/247 (42%), Gaps = 52/247 (21%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
F L IG+G+FGEV + + + A+K + E ++E ++ E +L++ S
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSPY 78
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNY 227
I + + S+ + L++IMEYL GG +A + + + ++ +H
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATI-LREILKGLDYLHSERK 137
Query: 228 IHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPE 287
IHRDIK N+LL + G +KL+DFG+
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAG--------------------------------- 164
Query: 288 SGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 347
QL QI R VGTP ++APEV+ + Y + D WSLG E
Sbjct: 165 ------------QLTDTQIKRNXF----VGTPFWMAPEVIKQSAYDFKADIWSLGITAIE 208
Query: 348 MLVGYPP 354
+ G PP
Sbjct: 209 LAKGEPP 215
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 140/340 (41%), Gaps = 89/340 (26%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRA----ERNLLAEVASH-C 167
++G GA V+ C + YA+K ++K Q H+R+ E +L + H
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEK-------QPGHIRSRVFREVEMLYQCQGHRN 72
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNY 227
+++L F++ + YL+ E + GG + A + A++ +H
Sbjct: 73 VLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGI 132
Query: 228 IHRDIKPDNLLL---DQNGHMKLSDFGLCKPL----DCTNLSAIXXXXXXXXXXXXXSMD 280
HRD+KP+N+L +Q +K+ DFGL + DC+ +S
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPIST----------------- 175
Query: 281 VDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKG-----YGME 335
PE + G+ +Y+APEV+ Y
Sbjct: 176 -----PE------------------------LLTPCGSAEYMAPEVVEAFSEEASIYDKR 206
Query: 336 CDWWSLGAIMYEMLVGYPPFY----SD------DPVTTCRKIVH---WKNHLKFPEE--A 380
CD WSLG I+Y +L GYPPF SD + C+ ++ + +FP++ A
Sbjct: 207 CDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWA 266
Query: 381 RLTPEAKDLICRLLC-DVEHRLGTLGSEQIKAHPWFKDIA 419
++ AKDLI +LL D + R L + Q+ HPW + A
Sbjct: 267 HISCAAKDLISKLLVRDAKQR---LSAAQVLQHPWVQGCA 303
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 142/349 (40%), Gaps = 63/349 (18%)
Query: 94 EYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHV 153
+Y + R D ++++ +G GAFG+V Q K++ + A K + S ++E
Sbjct: 25 QYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDY 81
Query: 154 RAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA-RFYI 212
E ++LA IVKL +F L++++E+ GG V +
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVC 141
Query: 213 AQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXX 272
Q++ A+ +H + IHRD+K N+L +G +KL+DFG+
Sbjct: 142 KQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGV-------------------- 181
Query: 273 XXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL---- 328
S R I RR S +GTP ++APEV++
Sbjct: 182 ---------------SAKNTR-----------XIQRRD---SFIGTPYWMAPEVVMCETS 212
Query: 329 -KKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAK 387
+ Y + D WSLG + EM PP + +P+ KI + +R + K
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK-SEPPTLAQPSRWSSNFK 271
Query: 388 DLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVN 435
D + + L +V+ R T Q+ HP+ + + E+ A K EV
Sbjct: 272 DFLKKCLEKNVDARWTT---SQLLQHPFVTVDSNKPIRELIAEAKAEVT 317
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 142/349 (40%), Gaps = 63/349 (18%)
Query: 94 EYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHV 153
+Y + R D ++++ +G GAFG+V Q K++ + A K + S ++E
Sbjct: 25 QYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDY 81
Query: 154 RAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXX-XXXXVARFYI 212
E ++LA IVKL +F L++++E+ GG V +
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVC 141
Query: 213 AQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXX 272
Q++ A+ +H + IHRD+K N+L +G +KL+DFG+
Sbjct: 142 KQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGV-------------------- 181
Query: 273 XXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL---- 328
S R I RR S +GTP ++APEV++
Sbjct: 182 ---------------SAKNTR-----------TIQRRD---SFIGTPYWMAPEVVMCETS 212
Query: 329 -KKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAK 387
+ Y + D WSLG + EM PP + +P+ KI + +R + K
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK-SEPPTLAQPSRWSSNFK 271
Query: 388 DLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVN 435
D + + L +V+ R T Q+ HP+ + + E+ A K EV
Sbjct: 272 DFLKKCLEKNVDARWTT---SQLLQHPFVTVDSNKPIRELIAEAKAEVT 317
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 141/349 (40%), Gaps = 79/349 (22%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVE-----HVRAERNLLAE 162
+ ++ +G GAFG V +K+ +K +KK ++L +E V E +L+
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 163 VASHCIVKLYYSFQDAEYLYLIME-YLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
V I+K+ F++ + L+ME + G D+ +A + Q V A+
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGY 145
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
+ + IHRDIK +N+++ ++ +KL DFG L+
Sbjct: 146 LRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE------------------------ 181
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY-GMECDWWS 340
R KL Y+ GT +Y APEVL+ Y G E + WS
Sbjct: 182 --------------------------RGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWS 215
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
LG +Y ++ + ++P + V H + ++ E L+ LL V R
Sbjct: 216 LGVTLYTLV------FEENPFCELEETVEAAIHPPY----LVSKELMSLVSGLLQPVPER 265
Query: 401 LGTLGSEQIKAHPW------FKDIAWDKLYEMEAAYKPEVNGVLDTQNF 443
TL E++ PW D W++++ + KPE +GVL +
Sbjct: 266 RTTL--EKLVTDPWVTQPVNLADYTWEEVFRVN---KPE-SGVLSAASL 308
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 139/340 (40%), Gaps = 89/340 (26%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRA----ERNLLAEVASH-C 167
++G GA V+ C + YA+K ++K Q H+R+ E +L + H
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEK-------QPGHIRSRVFREVEMLYQCQGHRN 72
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNY 227
+++L F++ + YL+ E + GG + A + A++ +H
Sbjct: 73 VLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGI 132
Query: 228 IHRDIKPDNLLL---DQNGHMKLSDFGLCKPL----DCTNLSAIXXXXXXXXXXXXXSMD 280
HRD+KP+N+L +Q +K+ DF L + DC+ +S
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIST----------------- 175
Query: 281 VDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKG-----YGME 335
PE + G+ +Y+APEV+ Y
Sbjct: 176 -----PE------------------------LLTPCGSAEYMAPEVVEAFSEEASIYDKR 206
Query: 336 CDWWSLGAIMYEMLVGYPPFY----SD------DPVTTCRKIVH---WKNHLKFPEE--A 380
CD WSLG I+Y +L GYPPF SD + C+ ++ + +FP++ A
Sbjct: 207 CDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWA 266
Query: 381 RLTPEAKDLICRLLC-DVEHRLGTLGSEQIKAHPWFKDIA 419
++ AKDLI +LL D + R L + Q+ HPW + A
Sbjct: 267 HISCAAKDLISKLLVRDAKQR---LSAAQVLQHPWVQGCA 303
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 112/270 (41%), Gaps = 59/270 (21%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRL--CQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLL 160
I+ DD++L +IG GA V+ C KK L+K + ++ + E +
Sbjct: 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT----SMDELLKEIQAM 67
Query: 161 AEVASHCIVKLYYSFQDAEYLYLIMEYLPGG---DVXXXXXXXXXXXXXVARFYIAQSVL 217
++ IV Y SF + L+L+M+ L GG D+ V ++L
Sbjct: 68 SQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATIL 127
Query: 218 -----AIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXX 272
+E +HK+ IHRD+K N+LL ++G ++++DFG+
Sbjct: 128 REVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGV-------------------- 167
Query: 273 XXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KG 331
F +G I R K+ + VGTP ++APEV+ + +G
Sbjct: 168 ----------SAFLATGG--------------DITRNKVRKTFVGTPCWMAPEVMEQVRG 203
Query: 332 YGMECDWWSLGAIMYEMLVGYPPFYSDDPV 361
Y + D WS G E+ G P++ P+
Sbjct: 204 YDFKADIWSFGITAIELATGAAPYHKYPPM 233
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 122/310 (39%), Gaps = 67/310 (21%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMK--KLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKL 171
+GRG FG V C E S Y K K+K ++ + V+ E ++L I+ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL------VKKEISILNIARHRNILHL 66
Query: 172 YYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIESIHKHNYIHR 230
+ SF+ E L +I E++ G D+ Y+ Q A++ +H HN H
Sbjct: 67 HESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHF 126
Query: 231 DIKPDNLLLD--QNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPES 288
DI+P+N++ ++ +K+ +FG + L P
Sbjct: 127 DIRPENIIYQTRRSSTIKIIEFGQARQLK----------------------------PGD 158
Query: 289 GCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 348
+ +P +Y APEV D WSLG ++Y +
Sbjct: 159 NFRLLFTAP----------------------EYYAPEVHQHDVVSTATDMWSLGTLVYVL 196
Query: 349 LVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEA--RLTPEAKDLICRLLCDVEHRLGTLGS 406
L G PF ++ I++ + F EEA ++ EA D + RLL V+ R + +
Sbjct: 197 LSGINPFLAETNQQIIENIMNAE--YTFDEEAFKEISIEAMDFVDRLL--VKERKSRMTA 252
Query: 407 EQIKAHPWFK 416
+ HPW K
Sbjct: 253 SEALQHPWLK 262
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 131/313 (41%), Gaps = 46/313 (14%)
Query: 97 RLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAE 156
R+ RH + ++L+ +G+GA+G V ++++G + A+KK+ + S R E
Sbjct: 2 RVDRHVLR--KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-E 58
Query: 157 RNLLAEVASH-CIVKLYYSFQ--DAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIA 213
+L E++ H IV L + + +YL+ +Y+ + V + Y+
Sbjct: 59 IMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM---ETDLHAVIRANILEPVHKQYVV 115
Query: 214 -QSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXX 272
Q + I+ +H +HRD+KP N+LL+ H+K++DFGL + N+ +
Sbjct: 116 YQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSF--VNIRRVTNNIPLSI 173
Query: 273 XXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKG 331
+ D D RW Y APE+LL
Sbjct: 174 NENTENFDDDQPILTDYVATRW--------------------------YRAPEILLGSTK 207
Query: 332 YGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPE----EARLTPEAK 387
Y D WSLG I+ E+L G P F + +I+ + FP E+ +P AK
Sbjct: 208 YTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGV---IDFPSNEDVESIQSPFAK 264
Query: 388 DLICRLLCDVEHR 400
+I L VE R
Sbjct: 265 TMIESLKEKVEIR 277
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 141/349 (40%), Gaps = 63/349 (18%)
Query: 94 EYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHV 153
+Y + R D ++++ +G GAFG+V Q K++ + A K + S ++E
Sbjct: 25 QYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDY 81
Query: 154 RAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA-RFYI 212
E ++LA IVKL +F L++++E+ GG V +
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVC 141
Query: 213 AQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXX 272
Q++ A+ +H + IHRD+K N+L +G +KL+DFG+
Sbjct: 142 KQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGV-------------------- 181
Query: 273 XXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL---- 328
S R I RR +GTP ++APEV++
Sbjct: 182 ---------------SAKNTR-----------XIQRRD---XFIGTPYWMAPEVVMCETS 212
Query: 329 -KKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAK 387
+ Y + D WSLG + EM PP + +P+ KI + +R + K
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK-SEPPTLAQPSRWSSNFK 271
Query: 388 DLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVN 435
D + + L +V+ R T Q+ HP+ + + E+ A K EV
Sbjct: 272 DFLKKCLEKNVDARWTT---SQLLQHPFVTVDSNKPIRELIAEAKAEVT 317
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 108/264 (40%), Gaps = 54/264 (20%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLK---KSEMLSRGQVEHVRAERNLLAEVA 164
++ L +G G F V ++K + I A+KK+K +SE G E LL E++
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEA-KDGINRTALREIKLLQELS 70
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
I+ L +F + L+ +++ + Y+ ++ +E +H+
Sbjct: 71 HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ 130
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
H +HRD+KP+NLLLD+NG +KL+DFGL K
Sbjct: 131 HWILHRDLKPNNLLLDENGVLKLADFGLAK------------------------------ 160
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGA 343
+ SP H + R Y APE+L + YG+ D W++G
Sbjct: 161 --------SFGSPNRAYXHQVVTRW-----------YRAPELLFGARMYGVGVDMWAVGC 201
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKI 367
I+ E+L+ P D + +I
Sbjct: 202 ILAELLLRVPFLPGDSDLDQLTRI 225
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 112/270 (41%), Gaps = 59/270 (21%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRL--CQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLL 160
I+ DD++L +IG GA V+ C KK L+K + ++ + E +
Sbjct: 7 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT----SMDELLKEIQAM 62
Query: 161 AEVASHCIVKLYYSFQDAEYLYLIMEYLPGG---DVXXXXXXXXXXXXXVARFYIAQSVL 217
++ IV Y SF + L+L+M+ L GG D+ V ++L
Sbjct: 63 SQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATIL 122
Query: 218 -----AIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXX 272
+E +HK+ IHRD+K N+LL ++G ++++DFG+
Sbjct: 123 REVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGV-------------------- 162
Query: 273 XXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KG 331
F +G I R K+ + VGTP ++APEV+ + +G
Sbjct: 163 ----------SAFLATGG--------------DITRNKVRKTFVGTPCWMAPEVMEQVRG 198
Query: 332 YGMECDWWSLGAIMYEMLVGYPPFYSDDPV 361
Y + D WS G E+ G P++ P+
Sbjct: 199 YDFKADIWSFGITAIELATGAAPYHKYPPM 228
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 104/265 (39%), Gaps = 54/265 (20%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA- 164
D ++L I+G G EV L ++ + A+K L+ L+R ++R R A
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD--LARDPSFYLRFRREAQNAAAL 69
Query: 165 SHCIVKLYYSFQDAE-----YLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
+H + Y +AE Y++MEY+ G + A IA + A+
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
H++ IHRD+KP N+L+ +K+ DFG+ + +
Sbjct: 130 NFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAI----------------------- 166
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWW 339
+SG N + +GT Y++PE D +
Sbjct: 167 ------ADSG-----------------NSVXQTAAVIGTAQYLSPEQARGDSVDARSDVY 203
Query: 340 SLGAIMYEMLVGYPPFYSDDPVTTC 364
SLG ++YE+L G PPF D PV+
Sbjct: 204 SLGCVLYEVLTGEPPFTGDSPVSVA 228
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 146/358 (40%), Gaps = 74/358 (20%)
Query: 90 RKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQ 149
RK EY ++R + ++++ +G GAFG+V + K++G + A K + E S +
Sbjct: 3 RKSREYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVI---ETKSEEE 59
Query: 150 VEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR 209
+E E +LA IVKL ++ L++++E+ PGG V
Sbjct: 60 LEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQI 119
Query: 210 FYIAQSVL-AIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXX 268
+ + +L A+ +H IHRD+K N+L+ G ++L+DFG+ NL
Sbjct: 120 QVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVS----AKNLKT----- 170
Query: 269 XXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL 328
+ +R S +GTP ++APEV++
Sbjct: 171 -------------------------------------LQKRD---SFIGTPYWMAPEVVM 190
Query: 329 -----KKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLT 383
Y + D WSLG + EM PP + +P+ KI K LT
Sbjct: 191 CETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA------KSDPPTLLT 244
Query: 384 P-----EAKDLI-CRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDK-LYEMEAAYKPEV 434
P E +D + L + E R + Q+ HP+ I +K L E+ A K EV
Sbjct: 245 PSKWSVEFRDFLKIALDKNPETR---PSAAQLLEHPFVSSITSNKALRELVAEAKAEV 299
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 104/265 (39%), Gaps = 54/265 (20%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA- 164
D ++L I+G G EV L ++ + A+K L+ L+R ++R R A
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD--LARDPSFYLRFRREAQNAAAL 69
Query: 165 SHCIVKLYYSFQDAE-----YLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
+H + Y +AE Y++MEY+ G + A IA + A+
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
H++ IHRD+KP N+++ +K+ DFG+ + +
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI----------------------- 166
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWW 339
+SG N + +GT Y++PE D +
Sbjct: 167 ------ADSG-----------------NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 203
Query: 340 SLGAIMYEMLVGYPPFYSDDPVTTC 364
SLG ++YE+L G PPF D PV+
Sbjct: 204 SLGCVLYEVLTGEPPFTGDSPVSVA 228
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 134/345 (38%), Gaps = 83/345 (24%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
S+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 62
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIES 221
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H H +HRD+KP+NLL++ G +KL+DFGL
Sbjct: 122 CHSHRVLHRDLKPENLLINTEGAIKLADFGL----------------------------- 152
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWS 340
R + P+ H V T Y APE+LL K Y D WS
Sbjct: 153 ---------ARAFGVPVRTYXH-----------EVVTLWYRAPEILLGCKYYSTAVDIWS 192
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR--- 381
LG I EM+ F D + +I V W FP+ AR
Sbjct: 193 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 252
Query: 382 ------LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 253 SKVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 294
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 134/345 (38%), Gaps = 83/345 (24%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
S+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 60
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIES 221
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H H +HRD+KP+NLL++ G +KL+DFGL
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIKLADFGL----------------------------- 150
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWS 340
R + P+ H V T Y APE+LL K Y D WS
Sbjct: 151 ---------ARAFGVPVRTYXH-----------EVVTLWYRAPEILLGCKYYSTAVDIWS 190
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR--- 381
LG I EM+ F D + +I V W FP+ AR
Sbjct: 191 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 250
Query: 382 ------LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 251 SKVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 292
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 130/312 (41%), Gaps = 71/312 (22%)
Query: 107 DFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH 166
DF+ + ++G+GAFG+V + YA+KK++ +E ++ + +E LLA +
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVMLLASLNHQ 62
Query: 167 CIVKLYYSF-------------QDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIA 213
+V+ Y ++ + L++ MEY G + + +
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF 122
Query: 214 QSVL-AIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK----PLDCTNLSAIXXXX 268
+ +L A+ IH IHRD+KP N+ +D++ ++K+ DFGL K LD L +
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS----- 177
Query: 269 XXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL 328
P S S +GT Y+A EVL
Sbjct: 178 --------------QNLPGSSDN--------------------LTSAIGTAMYVATEVLD 203
Query: 329 KKG-YGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFP---EEARLTP 384
G Y + D +SLG I +EM+ YP + V +K+ ++FP ++ ++
Sbjct: 204 GTGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKLRSVS--IEFPPDFDDNKMKV 259
Query: 385 EAKDLICRLLCD 396
E K I RLL D
Sbjct: 260 EKK--IIRLLID 269
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 105/265 (39%), Gaps = 54/265 (20%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA- 164
D ++L I+G G EV L ++ + A+K L+ L+R ++R R A
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD--LARDPSFYLRFRREAQNAAAL 69
Query: 165 SHCIVKLYYSFQDAE-----YLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
+H + Y+ +AE Y++MEY+ G + A IA + A+
Sbjct: 70 NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
H++ IHRD+KP N+++ +K+ DFG+ + +
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA---------------------- 167
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWW 339
+SG N + +GT Y++PE D +
Sbjct: 168 -------DSG-----------------NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 203
Query: 340 SLGAIMYEMLVGYPPFYSDDPVTTC 364
SLG ++YE+L G PPF D PV+
Sbjct: 204 SLGCVLYEVLTGEPPFTGDSPVSVA 228
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 134/345 (38%), Gaps = 83/345 (24%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
S+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 61
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIES 221
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H H +HRD+KP+NLL++ G +KL+DFGL
Sbjct: 121 CHSHRVLHRDLKPENLLINTEGAIKLADFGL----------------------------- 151
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWS 340
R + P+ H V T Y APE+LL K Y D WS
Sbjct: 152 ---------ARAFGVPVRTYXH-----------EVVTLWYRAPEILLGCKYYSTAVDIWS 191
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR--- 381
LG I EM+ F D + +I V W FP+ AR
Sbjct: 192 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 251
Query: 382 ------LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 252 SKVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 293
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 134/345 (38%), Gaps = 83/345 (24%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
S+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 60
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIES 221
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H H +HRD+KP+NLL++ G +KL+DFGL
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIKLADFGL----------------------------- 150
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWS 340
R + P+ H V T Y APE+LL K Y D WS
Sbjct: 151 ---------ARAFGVPVRTYXH-----------EVVTLWYRAPEILLGCKYYSTAVDIWS 190
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR--- 381
LG I EM+ F D + +I V W FP+ AR
Sbjct: 191 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 250
Query: 382 ------LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 251 SKVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 292
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 131/344 (38%), Gaps = 81/344 (23%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
S+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 62
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGG-DVXXXXXXXXXXXXXVARFYIAQSVLAIESI 222
IVKL LYL+ E+L + + Y+ Q + +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA----------------------------- 153
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSL 341
R + P+ H V T Y APE+LL K Y D WSL
Sbjct: 154 ---------RAFGVPVRTYXH-----------EVVTLWYRAPEILLGCKYYSTAVDIWSL 193
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR---- 381
G I EM+ F D + +I V W FP+ AR
Sbjct: 194 GCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFS 253
Query: 382 -----LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 254 KVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 294
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 104/265 (39%), Gaps = 54/265 (20%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA- 164
D ++L I+G G EV L ++ + A+K L+ L+R ++R R A
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD--LARDPSFYLRFRREAQNAAAL 69
Query: 165 SHCIVKLYYSFQDAE-----YLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
+H + Y +AE Y++MEY+ G + A IA + A+
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
H++ IHRD+KP N+++ +K+ DFG+ + +
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI----------------------- 166
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWW 339
+SG N + +GT Y++PE D +
Sbjct: 167 ------ADSG-----------------NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 203
Query: 340 SLGAIMYEMLVGYPPFYSDDPVTTC 364
SLG ++YE+L G PPF D PV+
Sbjct: 204 SLGCVLYEVLTGEPPFTGDSPVSVA 228
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 134/345 (38%), Gaps = 83/345 (24%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
S+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 59
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIES 221
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H H +HRD+KP+NLL++ G +KL+DFGL
Sbjct: 119 CHSHRVLHRDLKPENLLINTEGAIKLADFGL----------------------------- 149
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWS 340
R + P+ H V T Y APE+LL K Y D WS
Sbjct: 150 ---------ARAFGVPVRTYXH-----------EVVTLWYRAPEILLGCKYYSTAVDIWS 189
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR--- 381
LG I EM+ F D + +I V W FP+ AR
Sbjct: 190 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 249
Query: 382 ------LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 250 SKVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 291
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 114/295 (38%), Gaps = 57/295 (19%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA- 164
D ++L I+G G EV L ++ + A+K L+ L+R ++R R A
Sbjct: 29 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD--LARDPSFYLRFRREAQNAAAL 86
Query: 165 SHCIVKLYYSFQDAE-----YLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
+H + Y +AE Y++MEY+ G + A IA + A+
Sbjct: 87 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 146
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
H++ IHRD+KP N+++ +K+ DFG+ + +
Sbjct: 147 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI----------------------- 183
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWW 339
+SG N + +GT Y++PE D +
Sbjct: 184 ------ADSG-----------------NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 220
Query: 340 SLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL 394
SLG ++YE+L G PPF D PV+ + V P AR + DL +L
Sbjct: 221 SLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED---PIPPSARHEGLSADLDAVVL 272
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 133/345 (38%), Gaps = 83/345 (24%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
S+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 60
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIES 221
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------------------- 150
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWS 340
R + P+ H V T Y APE+LL K Y D WS
Sbjct: 151 ---------ARAFGVPVRTYTH-----------EVVTLWYRAPEILLGCKYYSTAVDIWS 190
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR--- 381
LG I EM+ F D + +I V W FP+ AR
Sbjct: 191 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 250
Query: 382 ------LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 251 SKVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 292
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 133/345 (38%), Gaps = 83/345 (24%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
S+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 61
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIES 221
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------------------- 151
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWS 340
R + P+ H V T Y APE+LL K Y D WS
Sbjct: 152 ---------ARAFGVPVRTYXH-----------EVVTLWYRAPEILLGCKYYSTAVDIWS 191
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR--- 381
LG I EM+ F D + +I V W FP+ AR
Sbjct: 192 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 251
Query: 382 ------LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 252 SKVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 293
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 133/345 (38%), Gaps = 83/345 (24%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
S+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 59
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIES 221
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------------------- 149
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWS 340
R + P+ H V T Y APE+LL K Y D WS
Sbjct: 150 ---------ARAFGVPVRTYXH-----------EVVTLWYRAPEILLGCKYYSTAVDIWS 189
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR--- 381
LG I EM+ F D + +I V W FP+ AR
Sbjct: 190 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 249
Query: 382 ------LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 250 SKVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 291
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 133/345 (38%), Gaps = 83/345 (24%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
S+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 62
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIES 221
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------------------- 152
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWS 340
R + P+ H V T Y APE+LL K Y D WS
Sbjct: 153 ---------ARAFGVPVRTYXH-----------EVVTLWYRAPEILLGCKYYSTAVDIWS 192
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR--- 381
LG I EM+ F D + +I V W FP+ AR
Sbjct: 193 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 252
Query: 382 ------LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 253 SKVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 294
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 133/345 (38%), Gaps = 83/345 (24%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
S+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 63
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIES 221
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------------------- 153
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWS 340
R + P+ H V T Y APE+LL K Y D WS
Sbjct: 154 ---------ARAFGVPVRTYXH-----------EVVTLWYRAPEILLGCKYYSTAVDIWS 193
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR--- 381
LG I EM+ F D + +I V W FP+ AR
Sbjct: 194 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 253
Query: 382 ------LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 254 SKVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 295
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 133/345 (38%), Gaps = 83/345 (24%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
S+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 61
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIES 221
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------------------- 151
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWS 340
R + P+ H V T Y APE+LL K Y D WS
Sbjct: 152 ---------ARAFGVPVRTYXH-----------EVVTLWYRAPEILLGCKYYSTAVDIWS 191
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR--- 381
LG I EM+ F D + +I V W FP+ AR
Sbjct: 192 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 251
Query: 382 ------LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 252 SKVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 293
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 133/345 (38%), Gaps = 83/345 (24%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
S+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 59
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIES 221
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------------------- 149
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWS 340
R + P+ H V T Y APE+LL K Y D WS
Sbjct: 150 ---------ARAFGVPVRTYXH-----------EVVTLWYRAPEILLGCKYYSTAVDIWS 189
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR--- 381
LG I EM+ F D + +I V W FP+ AR
Sbjct: 190 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 249
Query: 382 ------LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 250 SKVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 291
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 133/345 (38%), Gaps = 83/345 (24%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
S+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 59
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIES 221
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------------------- 149
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWS 340
R + P+ H V T Y APE+LL K Y D WS
Sbjct: 150 ---------ARAFGVPVRTYXH-----------EVVTLWYRAPEILLGCKYYSTAVDIWS 189
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR--- 381
LG I EM+ F D + +I V W FP+ AR
Sbjct: 190 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 249
Query: 382 ------LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 250 SKVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 291
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 133/345 (38%), Gaps = 83/345 (24%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
S+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 62
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIES 221
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA---------------------------- 153
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWS 340
R + P+ H V T Y APE+LL K Y D WS
Sbjct: 154 ----------RAFGVPVRTYXH-----------EVVTLWYRAPEILLGCKYYSTAVDIWS 192
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR--- 381
LG I EM+ F D + +I V W FP+ AR
Sbjct: 193 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 252
Query: 382 ------LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 253 SKVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 294
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 133/345 (38%), Gaps = 83/345 (24%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
S+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 60
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIES 221
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------------------- 150
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWS 340
R + P+ H V T Y APE+LL K Y D WS
Sbjct: 151 ---------ARAFGVPVRTYXH-----------EVVTLWYRAPEILLGCKYYSTAVDIWS 190
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR--- 381
LG I EM+ F D + +I V W FP+ AR
Sbjct: 191 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 250
Query: 382 ------LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 251 SKVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 292
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 133/345 (38%), Gaps = 83/345 (24%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
S+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 62
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIES 221
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------------------- 152
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWS 340
R + P+ H V T Y APE+LL K Y D WS
Sbjct: 153 ---------ARAFGVPVRTYXH-----------EVVTLWYRAPEILLGCKYYSTAVDIWS 192
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR--- 381
LG I EM+ F D + +I V W FP+ AR
Sbjct: 193 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 252
Query: 382 ------LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 253 SKVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 294
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 133/345 (38%), Gaps = 83/345 (24%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
S+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 61
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIES 221
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------------------- 151
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWS 340
R + P+ H V T Y APE+LL K Y D WS
Sbjct: 152 ---------ARAFGVPVRTYXH-----------EVVTLWYRAPEILLGCKYYSTAVDIWS 191
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR--- 381
LG I EM+ F D + +I V W FP+ AR
Sbjct: 192 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 251
Query: 382 ------LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 252 SKVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 293
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 133/346 (38%), Gaps = 83/346 (23%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE 162
+ +++F + IG G +G V + K +G + A+KK++ + + G E +LL E
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKE 62
Query: 163 VASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIE 220
+ IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 221 SIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMD 280
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 122 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGL---------------------------- 153
Query: 281 VDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWW 339
R + P+ H V T Y APE+LL K Y D W
Sbjct: 154 ----------ARAFGVPVRTYTH-----------EVVTLWYRAPEILLGCKYYSTAVDIW 192
Query: 340 SLGAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR-- 381
SLG I EM+ F D + +I V W FP+ AR
Sbjct: 193 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 252
Query: 382 -------LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 253 FSKVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 295
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 132/344 (38%), Gaps = 83/344 (24%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELN 67
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIESI 222
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA----------------------------- 157
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSL 341
R + P+ H V T Y APE+LL K Y D WSL
Sbjct: 158 ---------RAFGVPVRTYTH-----------EVVTLWYRAPEILLGXKYYSTAVDIWSL 197
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR---- 381
G I EM+ F D + +I V W FP+ AR
Sbjct: 198 GCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFS 257
Query: 382 -----LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 258 KVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 298
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 132/343 (38%), Gaps = 83/343 (24%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
S+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 59
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIES 221
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------------------- 149
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWS 340
R + P+ H V T Y APE+LL K Y D WS
Sbjct: 150 ---------ARAFGVPVRTYXH-----------EVVTLWYRAPEILLGCKYYSTAVDIWS 189
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR--- 381
LG I EM+ F D + +I V W FP+ AR
Sbjct: 190 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 249
Query: 382 ------LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKD 417
L + + L+ ++L D R + ++ AHP+F+D
Sbjct: 250 SKVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQD 289
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 132/344 (38%), Gaps = 83/344 (24%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELN 60
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIESI 222
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA----------------------------- 150
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSL 341
R + P+ H V T Y APE+LL K Y D WSL
Sbjct: 151 ---------RAFGVPVRTYTH-----------EVVTLWYRAPEILLGXKYYSTAVDIWSL 190
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR---- 381
G I EM+ F D + +I V W FP+ AR
Sbjct: 191 GCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFS 250
Query: 382 -----LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 251 KVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 291
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 102/261 (39%), Gaps = 54/261 (20%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA- 164
D ++L I+G G EV L ++ + A+K L+ L+R ++R R A
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD--LARDPSFYLRFRREAQNAAAL 69
Query: 165 SHCIVKLYYSFQDAE-----YLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
+H + Y +AE Y++MEY+ G + A IA + A+
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
H++ IHRD+KP N+++ +K+ DFG+ + +
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI----------------------- 166
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWW 339
+SG N + +GT Y++PE D +
Sbjct: 167 ------ADSG-----------------NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 203
Query: 340 SLGAIMYEMLVGYPPFYSDDP 360
SLG ++YE+L G PPF D P
Sbjct: 204 SLGCVLYEVLTGEPPFTGDSP 224
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 132/344 (38%), Gaps = 83/344 (24%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELN 60
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIESI 222
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGL------------------------------ 149
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSL 341
R + P+ H V T Y APE+LL K Y D WSL
Sbjct: 150 --------ARAFGVPVRTYTH-----------EVVTLWYRAPEILLGCKYYSTAVDIWSL 190
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR---- 381
G I EM+ F D + +I V W FP+ AR
Sbjct: 191 GCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFS 250
Query: 382 -----LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 251 KVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 291
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 132/344 (38%), Gaps = 83/344 (24%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELN 60
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIESI 222
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGL------------------------------ 149
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSL 341
R + P+ H V T Y APE+LL K Y D WSL
Sbjct: 150 --------ARAFGVPVRTYTH-----------EVVTLWYRAPEILLGCKYYSTAVDIWSL 190
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR---- 381
G I EM+ F D + +I V W FP+ AR
Sbjct: 191 GCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFS 250
Query: 382 -----LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 251 KVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 291
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 11/140 (7%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL-LAEVASHCIVKLY 172
+GRG+FGEV ++K++G A+KK++ +E RAE + A + S IV LY
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR---------LEVFRAEELMACAGLTSPRIVPLY 151
Query: 173 YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDI 232
+ ++ ++ + ME L GG + A +Y+ Q++ +E +H +H D+
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDV 211
Query: 233 KPDNLLLDQNG-HMKLSDFG 251
K DN+LL +G H L DFG
Sbjct: 212 KADNVLLSSDGSHAALCDFG 231
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 132/344 (38%), Gaps = 83/344 (24%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELN 60
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIESI 222
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGL------------------------------ 149
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSL 341
R + P+ H V T Y APE+LL K Y D WSL
Sbjct: 150 --------ARAFGVPVRTYTH-----------EVVTLWYRAPEILLGCKYYSTAVDIWSL 190
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR---- 381
G I EM+ F D + +I V W FP+ AR
Sbjct: 191 GCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFS 250
Query: 382 -----LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 251 KVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 291
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 132/344 (38%), Gaps = 83/344 (24%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELN 59
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIESI 222
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGL------------------------------ 148
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSL 341
R + P+ H V T Y APE+LL K Y D WSL
Sbjct: 149 --------ARAFGVPVRTYTH-----------EVVTLWYRAPEILLGCKYYSTAVDIWSL 189
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR---- 381
G I EM+ F D + +I V W FP+ AR
Sbjct: 190 GCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFS 249
Query: 382 -----LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 250 KVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 290
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 11/140 (7%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL-LAEVASHCIVKLY 172
+GRG+FGEV ++K++G A+KK++ +E RAE + A + S IV LY
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVR---------LEVFRAEELMACAGLTSPRIVPLY 132
Query: 173 YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDI 232
+ ++ ++ + ME L GG + A +Y+ Q++ +E +H +H D+
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDV 192
Query: 233 KPDNLLLDQNG-HMKLSDFG 251
K DN+LL +G H L DFG
Sbjct: 193 KADNVLLSSDGSHAALCDFG 212
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 132/344 (38%), Gaps = 83/344 (24%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELN 67
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIESI 222
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGL------------------------------ 156
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSL 341
R + P+ H V T Y APE+LL K Y D WSL
Sbjct: 157 --------ARAFGVPVRTYTH-----------EVVTLWYRAPEILLGCKYYSTAVDIWSL 197
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR---- 381
G I EM+ F D + +I V W FP+ AR
Sbjct: 198 GCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFS 257
Query: 382 -----LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 258 KVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 298
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 149/372 (40%), Gaps = 73/372 (19%)
Query: 107 DFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSE--MLSRGQVEHVRAERNLLAE-V 163
DF L +++G GA+G V K +G I A+KK++ + + + + ++ ++ E +
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
+ ++ SF++ +Y+I E + D+ + +++I Q++ A++ +H
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHI-QYFIYQTLRAVKVLH 129
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
N IHRD+KP NLL++ N +K+ DFGL + +D
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID-------------------------- 163
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKG-YGMECDWWSLG 342
ES + ++ V T Y APEV+L Y D WS G
Sbjct: 164 ---ESAADNSEPT----------GQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCG 210
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEA-KDLICRLLCDVEHRL 401
I+ E+ + P F D +++ L TP + DL C +E
Sbjct: 211 CILAELFLRRPIFPGRD----------YRHQLLLIFGIIGTPHSDNDLRC-----IE--- 252
Query: 402 GTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVN--GVLDTQNFMKFDEVESQTPKRTGS 459
E IK+ P + +K++ P VN G+ Q + FD + T K
Sbjct: 253 SPRAREYIKSLPMYPAAPLEKMF-------PRVNPKGIDLLQRMLVFDPAKRITAKEALE 305
Query: 460 GPMRKMMLTPKD 471
P + P D
Sbjct: 306 HPYLQTYHDPND 317
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 133/345 (38%), Gaps = 83/345 (24%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
S+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 62
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIES 221
IVKL LYL+ E++ D+ + + Y+ Q + +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA---------------------------- 153
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWS 340
R + P+ H V T Y APE+LL K Y D WS
Sbjct: 154 ----------RAFGVPVRTYXH-----------EVVTLWYRAPEILLGCKYYSTAVDIWS 192
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR--- 381
LG I EM+ F D + +I V W FP+ AR
Sbjct: 193 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 252
Query: 382 ------LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 253 SKVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 294
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 132/344 (38%), Gaps = 83/344 (24%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELN 59
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIESI 222
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGL------------------------------ 148
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSL 341
R + P+ H V T Y APE+LL K Y D WSL
Sbjct: 149 --------ARAFGVPVRTYXH-----------EVVTLWYRAPEILLGCKYYSTAVDIWSL 189
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR---- 381
G I EM+ F D + +I V W FP+ AR
Sbjct: 190 GCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFS 249
Query: 382 -----LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 250 KVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 290
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 131/343 (38%), Gaps = 83/343 (24%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 60
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIESIH 223
IVKL LYL+ E+L D+ + + Y+ Q + + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGL------------------------------- 148
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLG 342
R + P+ H V T Y APE+LL K Y D WSLG
Sbjct: 149 -------ARAFGVPVRTYTH-----------EVVTLWYRAPEILLGCKYYSTAVDIWSLG 190
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR----- 381
I EM+ F D + +I V W FP+ AR
Sbjct: 191 CIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSK 250
Query: 382 ----LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 251 VVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 290
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 132/344 (38%), Gaps = 83/344 (24%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELN 59
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIESI 222
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGL------------------------------ 148
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSL 341
R + P+ H V T Y APE+LL K Y D WSL
Sbjct: 149 --------ARAFGVPVRTYXH-----------EVVTLWYRAPEILLGCKYYSTAVDIWSL 189
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR---- 381
G I EM+ F D + +I V W FP+ AR
Sbjct: 190 GCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFS 249
Query: 382 -----LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 250 KVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 290
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 149/372 (40%), Gaps = 73/372 (19%)
Query: 107 DFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSE--MLSRGQVEHVRAERNLLAE-V 163
DF L +++G GA+G V K +G I A+KK++ + + + + ++ ++ E +
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
+ ++ SF++ +Y+I E + D+ + +++I Q++ A++ +H
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHI-QYFIYQTLRAVKVLH 129
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
N IHRD+KP NLL++ N +K+ DFGL + +D
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID-------------------------- 163
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKG-YGMECDWWSLG 342
ES + ++ V T Y APEV+L Y D WS G
Sbjct: 164 ---ESAADNSEPT----------GQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCG 210
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEA-KDLICRLLCDVEHRL 401
I+ E+ + P F D +++ L TP + DL C +E
Sbjct: 211 CILAELFLRRPIFPGRD----------YRHQLLLIFGIIGTPHSDNDLRC-----IE--- 252
Query: 402 GTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVN--GVLDTQNFMKFDEVESQTPKRTGS 459
E IK+ P + +K++ P VN G+ Q + FD + T K
Sbjct: 253 SPRAREYIKSLPMYPAAPLEKMF-------PRVNPKGIDLLQRMLVFDPAKRITAKEALE 305
Query: 460 GPMRKMMLTPKD 471
P + P D
Sbjct: 306 HPYLQTYHDPND 317
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 132/344 (38%), Gaps = 83/344 (24%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELN 61
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIESI 222
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGL------------------------------ 150
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSL 341
R + P+ H V T Y APE+LL K Y D WSL
Sbjct: 151 --------ARAFGVPVRTYXH-----------EVVTLWYRAPEILLGCKYYSTAVDIWSL 191
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR---- 381
G I EM+ F D + +I V W FP+ AR
Sbjct: 192 GCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFS 251
Query: 382 -----LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 252 KVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 292
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 148/376 (39%), Gaps = 81/376 (21%)
Query: 107 DFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSE--MLSRGQVEHVRAERNLLAEVA 164
DF L +++G GA+G V K +G I A+KK++ + + + + ++ +L
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIK----ILKHFK 67
Query: 165 SHCIVKLYY-----SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
I+ ++ SF++ +Y+I E + D+ + +++I Q++ A+
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHI-QYFIYQTLRAV 125
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
+ +H N IHRD+KP NLL++ N +K+ DFGL + +D
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID---------------------- 163
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKG-YGMECDW 338
ES + ++ V T Y APEV+L Y D
Sbjct: 164 -------ESAADNSEPT----------GQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDV 206
Query: 339 WSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEA-KDLICRLLCDV 397
WS G I+ E+ + P F D +++ L TP + DL C +
Sbjct: 207 WSCGCILAELFLRRPIFPGRD----------YRHQLLLIFGIIGTPHSDNDLRC-----I 251
Query: 398 EHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVN--GVLDTQNFMKFDEVESQTPK 455
E E IK+ P + +K++ P VN G+ Q + FD + T K
Sbjct: 252 E---SPRAREYIKSLPMYPAAPLEKMF-------PRVNPKGIDLLQRMLVFDPAKRITAK 301
Query: 456 RTGSGPMRKMMLTPKD 471
P + P D
Sbjct: 302 EALEHPYLQTYHDPND 317
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 129/312 (41%), Gaps = 71/312 (22%)
Query: 107 DFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH 166
DF+ + ++G+GAFG+V + YA+KK++ +E ++ + +E LLA +
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVMLLASLNHQ 62
Query: 167 CIVKLYYSF-------------QDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIA 213
+V+ Y ++ + L++ MEY + + +
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 214 QSVL-AIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK----PLDCTNLSAIXXXX 268
+ +L A+ IH IHRD+KP N+ +D++ ++K+ DFGL K LD L +
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS----- 177
Query: 269 XXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL 328
P S S +GT Y+A EVL
Sbjct: 178 --------------QNLPGSSDN--------------------LTSAIGTAMYVATEVLD 203
Query: 329 KKG-YGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFP---EEARLTP 384
G Y + D +SLG I +EM+ YP + V +K+ ++FP ++ ++
Sbjct: 204 GTGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKLRSVS--IEFPPDFDDNKMKV 259
Query: 385 EAKDLICRLLCD 396
E K I RLL D
Sbjct: 260 EKK--IIRLLID 269
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 125/314 (39%), Gaps = 63/314 (20%)
Query: 109 DLLTIIGR-GAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
D IIG G FG+V Q K++ + A K + S ++E E ++LA
Sbjct: 12 DFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPN 68
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA-RFYIAQSVLAIESIHKHN 226
IVKL +F L++++E+ GG V + Q++ A+ +H +
Sbjct: 69 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 128
Query: 227 YIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFP 286
IHRD+K N+L +G +KL+DFG V +
Sbjct: 129 IIHRDLKAGNILFTLDGDIKLADFG-----------------------------VSAKNT 159
Query: 287 ESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-----KKGYGMECDWWSL 341
+ RR S +GTP ++APEV++ + Y + D WSL
Sbjct: 160 RTXIQRR-------------------DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL 200
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLL-CDVEHR 400
G + EM PP + +P+ KI + +R + KD + + L +V+ R
Sbjct: 201 GITLIEMAEIEPPHHELNPMRVLLKIAK-SEPPTLAQPSRWSSNFKDFLKKCLEKNVDAR 259
Query: 401 LGTLGSEQIKAHPW 414
T Q+ HP+
Sbjct: 260 WTT---SQLLQHPF 270
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 110/272 (40%), Gaps = 62/272 (22%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKL-----KKSEMLSRGQVEHVRAE 156
KI + + ++ +G G V L ++ A+K + +K E L R + E +
Sbjct: 7 KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNS- 65
Query: 157 RNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSV 216
++++ IV + ++ + YL+MEY+ G + A + Q +
Sbjct: 66 ----SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQIL 121
Query: 217 LAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXX 276
I+ H +HRDIKP N+L+D N +K+ DFG+ K L T+L+
Sbjct: 122 DGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT-------------- 167
Query: 277 XSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGM-E 335
Q H +GT Y +PE KG E
Sbjct: 168 -----------------------QTNH-----------VLGTVQYFSPE--QAKGEATDE 191
Query: 336 C-DWWSLGAIMYEMLVGYPPFYSDDPVTTCRK 366
C D +S+G ++YEMLVG PPF + V+ K
Sbjct: 192 CTDIYSIGIVLYEMLVGEPPFNGETAVSIAIK 223
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 61/259 (23%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
+++L +IG+G+FG+V + K A+K ++ + R E +R +L + +
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNT 158
Query: 168 --IVKLYYSFQDAEYLYLIMEYLPGG--DVXXXXXXXXXXXXXVARFYIAQSVL-AIESI 222
++ + +F ++ + E L ++ V +F A S+L ++++
Sbjct: 159 MNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKF--AHSILQCLDAL 216
Query: 223 HKHNYIHRDIKPDNLLLDQNGH--MKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMD 280
HK+ IH D+KP+N+LL Q G +K+ DFG
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFG----------------------------- 247
Query: 281 VDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 340
S C +H ++ Y+ + + Y APEV+L YGM D WS
Sbjct: 248 -------SSC----------YEHQRV------YTXIQSRFYRAPEVILGARYGMPIDMWS 284
Query: 341 LGAIMYEMLVGYPPFYSDD 359
LG I+ E+L GYP +D
Sbjct: 285 LGCILAELLTGYPLLPGED 303
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 100/244 (40%), Gaps = 57/244 (23%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSE---MLSRGQVEHVRAERNLLAEVASHCIVK 170
IG G++G V C+ + +G I A+KK +SE ++ + + +R +L ++ +V
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIR----MLKQLKHPNLVN 66
Query: 171 LYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHR 230
L F+ L+L+ EY + + + Q++ A+ HKHN IHR
Sbjct: 67 LLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHR 126
Query: 231 DIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGC 290
D+KP+N+L+ ++ +KL DFG + L + + +
Sbjct: 127 DVKPENILITKHSVIKLCDFGFARLLTGPS-----------------------DYYDDEV 163
Query: 291 GRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEML 349
RW Y +PE+L+ YG D W++G + E+L
Sbjct: 164 ATRW--------------------------YRSPELLVGDTQYGPPVDVWAIGCVFAELL 197
Query: 350 VGYP 353
G P
Sbjct: 198 SGVP 201
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 104/264 (39%), Gaps = 72/264 (27%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
DDF+ ++ +G G G V Q + SG I A +KL E+ + + +R E +L E S
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMA-RKLIHLEIKPAIRNQIIR-ELQVLHECNS 73
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI--- 222
IV Y +F + + ME++ GG + I + +L SI
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR---------IPEEILGKVSIAVL 124
Query: 223 -------HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
KH +HRD+KP N+L++ G +KL DFG
Sbjct: 125 RGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFG------------------------ 160
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
V G+ +S +A S VGT Y+APE L Y ++
Sbjct: 161 -----VSGQLIDS----------------------MANSFVGTRSYMAPERLQGTHYSVQ 193
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDD 359
D WS+G + E+ VG P D
Sbjct: 194 SDIWSMGLSLVELAVGRYPIPPPD 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 122/333 (36%), Gaps = 82/333 (24%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G G +G V ++ + G I A+K+++ + G E +LL E+ IV L
Sbjct: 29 VGEGTYGVVYKAKDSQ-GRIVALKRIR-LDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIK 233
L L+ E++ + Y+ Q + + H+H +HRD+K
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLK 146
Query: 234 PDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRR 293
P NLL++ +G +KL+DFGL R
Sbjct: 147 PQNLLINSDGALKLADFGL--------------------------------------ARA 168
Query: 294 WKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEMLVGY 352
+ P+ H V T Y AP+VL+ K Y D WS+G I EM+ G
Sbjct: 169 FGIPVRSYTH-----------EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
Query: 353 PPF---YSDDPVTTCRKIVHWKNHLKFPEEARL-----------------------TPEA 386
P F DD + I+ N ++P+ L E
Sbjct: 218 PLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEG 277
Query: 387 KDLICRLLC-DVEHRLGTLGSEQIKAHPWFKDI 418
DL+ +LC D R + + HP+FKD+
Sbjct: 278 IDLLSNMLCFDPNKR---ISARDAMNHPYFKDL 307
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 113/282 (40%), Gaps = 63/282 (22%)
Query: 85 LKDLERKETEYMRLKRHKISV---DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKK 141
L + +RK E ++ K+ DDF+ ++ +G G G V K SG + A +KL
Sbjct: 9 LDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIH 67
Query: 142 SEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXX 201
E+ + + +R E +L E S IV Y +F + + ME++ GG +
Sbjct: 68 LEIKPAIRNQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG 126
Query: 202 XXXXXVARFYIAQSVLAIESI----HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
+ S+ I+ + KH +HRD+KP N+L++ G +KL DFG
Sbjct: 127 RIPEQILG---KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFG------ 177
Query: 258 CTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVG 317
V G+ +S +A S VG
Sbjct: 178 -----------------------VSGQLIDS----------------------MANSFVG 192
Query: 318 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDD 359
T Y++PE L Y ++ D WS+G + EM VG P D
Sbjct: 193 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 234
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 61/259 (23%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
+++L +IG+G+FG+V + K A+K ++ + R E +R +L + +
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNT 158
Query: 168 --IVKLYYSFQDAEYLYLIMEYLPGG--DVXXXXXXXXXXXXXVARFYIAQSVL-AIESI 222
++ + +F ++ + E L ++ V +F A S+L ++++
Sbjct: 159 MNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKF--AHSILQCLDAL 216
Query: 223 HKHNYIHRDIKPDNLLLDQNGH--MKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMD 280
HK+ IH D+KP+N+LL Q G +K+ DFG
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFG----------------------------- 247
Query: 281 VDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 340
S C +H ++ Y+ + + Y APEV+L YGM D WS
Sbjct: 248 -------SSC----------YEHQRV------YTXIQSRFYRAPEVILGARYGMPIDMWS 284
Query: 341 LGAIMYEMLVGYPPFYSDD 359
LG I+ E+L GYP +D
Sbjct: 285 LGCILAELLTGYPLLPGED 303
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 122/333 (36%), Gaps = 82/333 (24%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G G +G V ++ + G I A+K+++ + G E +LL E+ IV L
Sbjct: 29 VGEGTYGVVYKAKDSQ-GRIVALKRIR-LDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIK 233
L L+ E++ + Y+ Q + + H+H +HRD+K
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLK 146
Query: 234 PDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRR 293
P NLL++ +G +KL+DFGL R
Sbjct: 147 PQNLLINSDGALKLADFGL--------------------------------------ARA 168
Query: 294 WKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEMLVGY 352
+ P+ H V T Y AP+VL+ K Y D WS+G I EM+ G
Sbjct: 169 FGIPVRSYTH-----------EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
Query: 353 PPF---YSDDPVTTCRKIVHWKNHLKFPEEARL-----------------------TPEA 386
P F DD + I+ N ++P+ L E
Sbjct: 218 PLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEG 277
Query: 387 KDLICRLLC-DVEHRLGTLGSEQIKAHPWFKDI 418
DL+ +LC D R + + HP+FKD+
Sbjct: 278 IDLLSNMLCFDPNKR---ISARDAMNHPYFKDL 307
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 130/343 (37%), Gaps = 81/343 (23%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+++F + IG G +G V + K +G + A+KK++ + + G E +LL E+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELN 59
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGG-DVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
IVKL LYL+ E++ + + Y+ Q + + H
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGL------------------------------- 148
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLG 342
R + P+ H V T Y APE+LL K Y D WSLG
Sbjct: 149 -------ARAFGVPVRTYTH-----------EVVTLWYRAPEILLGCKYYSTAVDIWSLG 190
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR----- 381
I EM+ F D + +I V W FP+ AR
Sbjct: 191 CIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSK 250
Query: 382 ----LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 251 VVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 290
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 134/334 (40%), Gaps = 74/334 (22%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G GAFG+V + K++G + A K + E S ++E E +LA IVKL
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVI---ETKSEEELEDYIVEIEILATCDHPYIVKLLG 75
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-AIESIHKHNYIHRDI 232
++ L++++E+ PGG V + + +L A+ +H IHRD+
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDL 135
Query: 233 KPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGR 292
K N+L+ G ++L+DFG+ NL
Sbjct: 136 KAGNVLMTLEGDIRLADFGVS----AKNLKT----------------------------- 162
Query: 293 RWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-----KKGYGMECDWWSLGAIMYE 347
+ +R S +GTP ++APEV++ Y + D WSLG + E
Sbjct: 163 -------------LQKRD---SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIE 206
Query: 348 MLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTP-----EAKDLI-CRLLCDVEHRL 401
M PP + +P+ KI K LTP E +D + L + E R
Sbjct: 207 MAQIEPPHHELNPMRVLLKIA------KSDPPTLLTPSKWSVEFRDFLKIALDKNPETR- 259
Query: 402 GTLGSEQIKAHPWFKDIAWDK-LYEMEAAYKPEV 434
+ Q+ HP+ I +K L E+ A K EV
Sbjct: 260 --PSAAQLLEHPFVSSITSNKALRELVAEAKAEV 291
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 111/278 (39%), Gaps = 63/278 (22%)
Query: 89 ERKETEYMRLKRHKISV---DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEML 145
+RK E ++ K+ DDF+ ++ +G G G V K SG + A +KL E+
Sbjct: 48 QRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIK 106
Query: 146 SRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXX 205
+ + +R E +L E S IV Y +F + + ME++ GG +
Sbjct: 107 PAIRNQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 165
Query: 206 XVARFYIAQSVLAIESI----HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNL 261
+ S+ I+ + KH +HRD+KP N+L++ G +KL DFG
Sbjct: 166 QILG---KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFG---------- 212
Query: 262 SAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDY 321
V G+ +S +A S VGT Y
Sbjct: 213 -------------------VSGQLIDS----------------------MANSFVGTRSY 231
Query: 322 IAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDD 359
++PE L Y ++ D WS+G + EM VG P D
Sbjct: 232 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 269
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 131/344 (38%), Gaps = 83/344 (24%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+++F + IG G +G V + K +G + A+ K++ + + G E +LL E+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIR-LDTETEGVPSTAIREISLLKELN 60
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIESI 222
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGL------------------------------ 149
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSL 341
R + P+ H V T Y APE+LL K Y D WSL
Sbjct: 150 --------ARAFGVPVRTYTH-----------EVVTLWYRAPEILLGCKYYSTAVDIWSL 190
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR---- 381
G I EM+ F D + +I V W FP+ AR
Sbjct: 191 GCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFS 250
Query: 382 -----LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 251 KVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 291
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 131/344 (38%), Gaps = 83/344 (24%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA 164
+++F + IG G +G V + K +G + A+ K++ + + G E +LL E+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIR-LDTETEGVPSTAIREISLLKELN 59
Query: 165 SHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA--RFYIAQSVLAIESI 222
IVKL LYL+ E+L D+ + + Y+ Q + +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
H H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGL------------------------------ 148
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSL 341
R + P+ H V T Y APE+LL K Y D WSL
Sbjct: 149 --------ARAFGVPVRTYTH-----------EVVTLWYRAPEILLGCKYYSTAVDIWSL 189
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKI---------VHWKN-------HLKFPEEAR---- 381
G I EM+ F D + +I V W FP+ AR
Sbjct: 190 GCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFS 249
Query: 382 -----LTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
L + + L+ ++L D R + ++ AHP+F+D+
Sbjct: 250 KVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALAHPFFQDVT 290
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 111/276 (40%), Gaps = 63/276 (22%)
Query: 89 ERKETEYMRLKRHKISV---DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEML 145
+RK E ++ K+ DDF+ ++ +G G G V K SG + A +KL E+
Sbjct: 5 QRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIK 63
Query: 146 SRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXX 205
+ + +R E +L E S IV Y +F + + ME++ GG +
Sbjct: 64 PAIRNQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 122
Query: 206 XVARFYIAQSVLAIESI----HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNL 261
+ S+ I+ + KH +HRD+KP N+L++ G +KL DFG
Sbjct: 123 QILG---KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFG---------- 169
Query: 262 SAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDY 321
V G+ +S +A S VGT Y
Sbjct: 170 -------------------VSGQLIDS----------------------MANSFVGTRSY 188
Query: 322 IAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYS 357
++PE L Y ++ D WS+G + EM VG P S
Sbjct: 189 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGS 224
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 108/259 (41%), Gaps = 61/259 (23%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
+++L +IG+G FG+V + K A+K ++ + R E +R +L + +
Sbjct: 99 YEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNT 158
Query: 168 --IVKLYYSFQDAEYLYLIMEYLPGG--DVXXXXXXXXXXXXXVARFYIAQSVL-AIESI 222
++ + +F ++ + E L ++ V +F A S+L ++++
Sbjct: 159 MNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKF--AHSILQCLDAL 216
Query: 223 HKHNYIHRDIKPDNLLLDQNGH--MKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMD 280
HK+ IH D+KP+N+LL Q G +K+ DFG
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFG----------------------------- 247
Query: 281 VDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 340
S C +H ++ Y + + Y APEV+L YGM D WS
Sbjct: 248 -------SSC----------YEHQRV------YXXIQSRFYRAPEVILGARYGMPIDMWS 284
Query: 341 LGAIMYEMLVGYPPFYSDD 359
LG I+ E+L GYP +D
Sbjct: 285 LGCILAELLTGYPLLPGED 303
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 116/316 (36%), Gaps = 85/316 (26%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC-IVKL 171
+IG G+FG V + SG + A+KK+ + + +++ +R HC IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRK--------LDHCNIVRL 78
Query: 172 YYSF------QDAEYLYLIMEYLPGGDVXXX---XXXXXXXXXXVARFYIAQSVLAIESI 222
Y F +D YL L+++Y+P + Y+ Q ++ I
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 223 HKHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H HRDIKP NLLLD + +KL DFG K
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------------------- 171
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWS 340
Q+ R + S + + Y APE++ Y D WS
Sbjct: 172 -----------------------QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
G ++ E+L+G P F D V +I+ L P ++ ++
Sbjct: 209 AGCVLAELLLGQPIFPGDSGVDQLVEIIKV---LGTPTREQIR------------EMNPN 253
Query: 401 LGTLGSEQIKAHPWFK 416
QIKAHPW K
Sbjct: 254 YTEFAFPQIKAHPWTK 269
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 83/161 (51%), Gaps = 8/161 (4%)
Query: 105 VDDF-DLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKK--SEMLSRGQV-EHVRAERNLL 160
V+DF D+ +G G F V+ C+EK +G YA K +KK S RG E + E ++L
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSIL 69
Query: 161 AEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIE 220
+V I+ L+ +++ + LI+E + GG++ A +I Q + +
Sbjct: 70 RQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVN 129
Query: 221 SIHKHNYIHRDIKPDN-LLLDQN---GHMKLSDFGLCKPLD 257
+H H D+KP+N +LLD+N H+KL DFGL ++
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 317 GTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKF 376
GTP+++APE++ + G+E D WS+G I Y +L G PF D T I F
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVS--YDF 237
Query: 377 PEE--ARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDI 418
EE ++ + AKD I +LL V+ L ++ HPW +
Sbjct: 238 DEEFFSQTSELAKDFIRKLL--VKETRKRLTIQEALRHPWITPV 279
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 94/243 (38%), Gaps = 52/243 (21%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG G +G V Q G +A+KK++ E G E ++L E+ IVKLY
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIR-LEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIK 233
+ L L+ E+L A+ ++ Q + I H +HRD+K
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 234 PDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRR 293
P NLL+++ G +K++DFGL R
Sbjct: 128 PQNLLINREGELKIADFGLA--------------------------------------RA 149
Query: 294 WKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEMLVGY 352
+ P+ + H V T Y AP+VL+ K Y D WS+G I EM+ G
Sbjct: 150 FGIPVRKYTH-----------EVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198
Query: 353 PPF 355
P F
Sbjct: 199 PLF 201
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 94/243 (38%), Gaps = 52/243 (21%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG G +G V Q G +A+KK++ E G E ++L E+ IVKLY
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIR-LEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIK 233
+ L L+ E+L A+ ++ Q + I H +HRD+K
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 234 PDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRR 293
P NLL+++ G +K++DFGL R
Sbjct: 128 PQNLLINREGELKIADFGLA--------------------------------------RA 149
Query: 294 WKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEMLVGY 352
+ P+ + H V T Y AP+VL+ K Y D WS+G I EM+ G
Sbjct: 150 FGIPVRKYTH-----------EVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGA 198
Query: 353 PPF 355
P F
Sbjct: 199 PLF 201
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 11/143 (7%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+GRG+FGEV ++K++G A+KK++ L +VE + A A ++S IV LY
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVR----LEVFRVEELVA----CAGLSSPRIVPLYG 117
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIK 233
+ ++ ++ + ME L GG + A +Y+ Q++ +E +H +H D+K
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 177
Query: 234 PDNLLLDQNG-HMKLSDFG--LC 253
DN+LL +G L DFG LC
Sbjct: 178 ADNVLLSSDGSRAALCDFGHALC 200
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 11/143 (7%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+GRG+FGEV ++K++G A+KK++ L +VE + A A ++S IV LY
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVR----LEVFRVEELVA----CAGLSSPRIVPLYG 133
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIK 233
+ ++ ++ + ME L GG + A +Y+ Q++ +E +H +H D+K
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 193
Query: 234 PDNLLLDQNG-HMKLSDFG--LC 253
DN+LL +G L DFG LC
Sbjct: 194 ADNVLLSSDGSRAALCDFGHALC 216
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 94/243 (38%), Gaps = 52/243 (21%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG G +G V Q G +A+KK++ E G E ++L E+ IVKLY
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIR-LEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIK 233
+ L L+ E+L A+ ++ Q + I H +HRD+K
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 234 PDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRR 293
P NLL+++ G +K++DFGL R
Sbjct: 128 PQNLLINREGELKIADFGLA--------------------------------------RA 149
Query: 294 WKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEMLVGY 352
+ P+ + H + T Y AP+VL+ K Y D WS+G I EM+ G
Sbjct: 150 FGIPVRKYTH-----------EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198
Query: 353 PPF 355
P F
Sbjct: 199 PLF 201
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 103/258 (39%), Gaps = 60/258 (23%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
DDF+ ++ +G G G V K SG + A +KL E+ + + +R E +L E S
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIR-ELQVLHECNS 63
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI--- 222
IV Y +F + + ME++ GG + + S+ I+ +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG---KVSIAVIKGLTYL 120
Query: 223 -HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
KH +HRD+KP N+L++ G +KL DFG V
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFG-----------------------------V 151
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 341
G+ +S +A S VGT Y++PE L Y ++ D WS+
Sbjct: 152 SGQLIDS----------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189
Query: 342 GAIMYEMLVGYPPFYSDD 359
G + EM VG P D
Sbjct: 190 GLSLVEMAVGRYPIPPPD 207
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 103/258 (39%), Gaps = 60/258 (23%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
DDF+ ++ +G G G V K SG + A +KL E+ + + +R E +L E S
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIR-ELQVLHECNS 63
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI--- 222
IV Y +F + + ME++ GG + + S+ I+ +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG---KVSIAVIKGLTYL 120
Query: 223 -HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
KH +HRD+KP N+L++ G +KL DFG V
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFG-----------------------------V 151
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 341
G+ +S +A S VGT Y++PE L Y ++ D WS+
Sbjct: 152 SGQLIDS----------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189
Query: 342 GAIMYEMLVGYPPFYSDD 359
G + EM VG P D
Sbjct: 190 GLSLVEMAVGRYPIPPPD 207
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 11/143 (7%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+GRG+FGEV ++K++G A+KK++ L +VE + A A ++S IV LY
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVR----LEVFRVEELVA----CAGLSSPRIVPLYG 131
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIK 233
+ ++ ++ + ME L GG + A +Y+ Q++ +E +H +H D+K
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 191
Query: 234 PDNLLLDQNG-HMKLSDFG--LC 253
DN+LL +G L DFG LC
Sbjct: 192 ADNVLLSSDGSRAALCDFGHALC 214
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 103/258 (39%), Gaps = 60/258 (23%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
DDF+ ++ +G G G V K SG + A +KL E+ + + +R E +L E S
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIR-ELQVLHECNS 63
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI--- 222
IV Y +F + + ME++ GG + + S+ I+ +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG---KVSIAVIKGLTYL 120
Query: 223 -HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
KH +HRD+KP N+L++ G +KL DFG V
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFG-----------------------------V 151
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 341
G+ +S +A S VGT Y++PE L Y ++ D WS+
Sbjct: 152 SGQLIDS----------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189
Query: 342 GAIMYEMLVGYPPFYSDD 359
G + EM VG P D
Sbjct: 190 GLSLVEMAVGRYPIPPPD 207
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 103/258 (39%), Gaps = 60/258 (23%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
DDF+ ++ +G G G V K SG + A +KL E+ + + +R E +L E S
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIR-ELQVLHECNS 63
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI--- 222
IV Y +F + + ME++ GG + + S+ I+ +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG---KVSIAVIKGLTYL 120
Query: 223 -HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
KH +HRD+KP N+L++ G +KL DFG V
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFG-----------------------------V 151
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 341
G+ +S +A S VGT Y++PE L Y ++ D WS+
Sbjct: 152 SGQLIDS----------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189
Query: 342 GAIMYEMLVGYPPFYSDD 359
G + EM VG P D
Sbjct: 190 GLSLVEMAVGRYPIPPPD 207
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 103/258 (39%), Gaps = 60/258 (23%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
DDF+ ++ +G G G V K SG + A +KL E+ + + +R E +L E S
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIR-ELQVLHECNS 63
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI--- 222
IV Y +F + + ME++ GG + + S+ I+ +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG---KVSIAVIKGLTYL 120
Query: 223 -HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
KH +HRD+KP N+L++ G +KL DFG V
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFG-----------------------------V 151
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 341
G+ +S +A S VGT Y++PE L Y ++ D WS+
Sbjct: 152 SGQLIDS----------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189
Query: 342 GAIMYEMLVGYPPFYSDD 359
G + EM VG P D
Sbjct: 190 GLSLVEMAVGRYPIPPPD 207
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 116/316 (36%), Gaps = 85/316 (26%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC-IVKL 171
+IG G+FG V + SG + A+KK+ + + +++ +R HC IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK--------LDHCNIVRL 78
Query: 172 YYSF------QDAEYLYLIMEYLPGGDVXXX---XXXXXXXXXXVARFYIAQSVLAIESI 222
Y F +D YL L+++Y+P + Y+ Q ++ I
Sbjct: 79 RYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 223 HKHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H HRDIKP NLLLD + +KL DFG K
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------------------- 171
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWS 340
Q+ R + S + + Y APE++ Y D WS
Sbjct: 172 -----------------------QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
G ++ E+L+G P F D V +I+ L P ++ ++
Sbjct: 209 AGCVLAELLLGQPIFPGDSGVDQLVEIIKV---LGTPTREQIR------------EMNPN 253
Query: 401 LGTLGSEQIKAHPWFK 416
QIKAHPW K
Sbjct: 254 YTEFKFPQIKAHPWTK 269
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 116/316 (36%), Gaps = 85/316 (26%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC-IVKL 171
+IG G+FG V + SG + A+KK+ + + +++ +R HC IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRK--------LDHCNIVRL 78
Query: 172 YYSF------QDAEYLYLIMEYLPGGDVXXX---XXXXXXXXXXVARFYIAQSVLAIESI 222
Y F +D YL L+++Y+P + Y+ Q ++ I
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 223 HKHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H HRDIKP NLLLD + +KL DFG K
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------------------- 171
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWS 340
Q+ R + S + + Y APE++ Y D WS
Sbjct: 172 -----------------------QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
G ++ E+L+G P F D V +I+ L P ++ ++
Sbjct: 209 AGCVLAELLLGQPIFPGDSGVDQLVEIIKV---LGTPTREQIR------------EMNPN 253
Query: 401 LGTLGSEQIKAHPWFK 416
QIKAHPW K
Sbjct: 254 YTEFAFPQIKAHPWTK 269
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 116/316 (36%), Gaps = 85/316 (26%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC-IVKL 171
+IG G+FG V + SG + A+KK+ + + +++ +R HC IV+L
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK--------LDHCNIVRL 90
Query: 172 YYSF------QDAEYLYLIMEYLPGGDVXXX---XXXXXXXXXXVARFYIAQSVLAIESI 222
Y F +D YL L+++Y+P + Y+ Q ++ I
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 223 HKHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H HRDIKP NLLLD + +KL DFG K
Sbjct: 151 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------------------- 183
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWS 340
Q+ R + S + + Y APE++ Y D WS
Sbjct: 184 -----------------------QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 220
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
G ++ E+L+G P F D V +I+ L P ++ ++
Sbjct: 221 AGCVLAELLLGQPIFPGDSGVDQLVEIIKV---LGTPTREQIR------------EMNPN 265
Query: 401 LGTLGSEQIKAHPWFK 416
QIKAHPW K
Sbjct: 266 YTEFKFPQIKAHPWTK 281
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 116/316 (36%), Gaps = 85/316 (26%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC-IVKL 171
+IG G+FG V + SG + A+KK+ + + +++ +R HC IV+L
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK--------LDHCNIVRL 112
Query: 172 YYSF------QDAEYLYLIMEYLPGGDVXXX---XXXXXXXXXXVARFYIAQSVLAIESI 222
Y F +D YL L+++Y+P + Y+ Q ++ I
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 223 HKHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H HRDIKP NLLLD + +KL DFG K
Sbjct: 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------------------- 205
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWS 340
Q+ R + S + + Y APE++ Y D WS
Sbjct: 206 -----------------------QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 242
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
G ++ E+L+G P F D V +I+ L P ++ ++
Sbjct: 243 AGCVLAELLLGQPIFPGDSGVDQLVEIIKV---LGTPTREQIR------------EMNPN 287
Query: 401 LGTLGSEQIKAHPWFK 416
QIKAHPW K
Sbjct: 288 YTEFKFPQIKAHPWTK 303
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 116/316 (36%), Gaps = 85/316 (26%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC-IVKL 171
+IG G+FG V + SG + A+KK+ + + +++ +R HC IV+L
Sbjct: 46 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK--------LDHCNIVRL 97
Query: 172 YYSF------QDAEYLYLIMEYLPGGDVXXX---XXXXXXXXXXVARFYIAQSVLAIESI 222
Y F +D YL L+++Y+P + Y+ Q ++ I
Sbjct: 98 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 157
Query: 223 HKHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H HRDIKP NLLLD + +KL DFG K
Sbjct: 158 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------------------- 190
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWS 340
Q+ R + S + + Y APE++ Y D WS
Sbjct: 191 -----------------------QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 227
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
G ++ E+L+G P F D V +I+ L P ++ ++
Sbjct: 228 AGCVLAELLLGQPIFPGDSGVDQLVEIIKV---LGTPTREQIR------------EMNPN 272
Query: 401 LGTLGSEQIKAHPWFK 416
QIKAHPW K
Sbjct: 273 YTEFKFPQIKAHPWTK 288
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 116/316 (36%), Gaps = 85/316 (26%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC-IVKL 171
+IG G+FG V + SG + A+KK+ + + +++ +R HC IV+L
Sbjct: 35 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK--------LDHCNIVRL 86
Query: 172 YYSF------QDAEYLYLIMEYLPGGDVXXX---XXXXXXXXXXVARFYIAQSVLAIESI 222
Y F +D YL L+++Y+P + Y+ Q ++ I
Sbjct: 87 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 146
Query: 223 HKHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H HRDIKP NLLLD + +KL DFG K
Sbjct: 147 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------------------- 179
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWS 340
Q+ R + S + + Y APE++ Y D WS
Sbjct: 180 -----------------------QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 216
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
G ++ E+L+G P F D V +I+ L P ++ ++
Sbjct: 217 AGCVLAELLLGQPIFPGDSGVDQLVEIIKV---LGTPTREQIR------------EMNPN 261
Query: 401 LGTLGSEQIKAHPWFK 416
QIKAHPW K
Sbjct: 262 YTEFKFPQIKAHPWTK 277
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 116/316 (36%), Gaps = 85/316 (26%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC-IVKL 171
+IG G+FG V + SG + A+KK+ + + +++ +R HC IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK--------LDHCNIVRL 78
Query: 172 YYSF------QDAEYLYLIMEYLPGGDVXXX---XXXXXXXXXXVARFYIAQSVLAIESI 222
Y F +D YL L+++Y+P + Y+ Q ++ I
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 223 HKHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H HRDIKP NLLLD + +KL DFG K
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------------------- 171
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWS 340
Q+ R + S + + Y APE++ Y D WS
Sbjct: 172 -----------------------QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
G ++ E+L+G P F D V +I+ L P ++ ++
Sbjct: 209 AGCVLAELLLGQPIFPGDSGVDQLVEIIKV---LGTPTREQIR------------EMNPN 253
Query: 401 LGTLGSEQIKAHPWFK 416
QIKAHPW K
Sbjct: 254 YTEFKFPQIKAHPWTK 269
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 116/316 (36%), Gaps = 85/316 (26%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC-IVKL 171
+IG G+FG V + SG + A+KK+ + + +++ +R HC IV+L
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK--------LDHCNIVRL 90
Query: 172 YYSF------QDAEYLYLIMEYLPGGDVXXX---XXXXXXXXXXVARFYIAQSVLAIESI 222
Y F +D YL L+++Y+P + Y+ Q ++ I
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 223 HKHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H HRDIKP NLLLD + +KL DFG K
Sbjct: 151 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------------------- 183
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWS 340
Q+ R + S + + Y APE++ Y D WS
Sbjct: 184 -----------------------QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 220
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
G ++ E+L+G P F D V +I+ L P ++ ++
Sbjct: 221 AGCVLAELLLGQPIFPGDSGVDQLVEIIKV---LGTPTREQIR------------EMNPN 265
Query: 401 LGTLGSEQIKAHPWFK 416
QIKAHPW K
Sbjct: 266 YTEFKFPQIKAHPWTK 281
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 116/316 (36%), Gaps = 85/316 (26%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC-IVKL 171
+IG G+FG V + SG + A+KK+ + + +++ +R HC IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK--------LDHCNIVRL 78
Query: 172 YYSF------QDAEYLYLIMEYLPGGDVXXX---XXXXXXXXXXVARFYIAQSVLAIESI 222
Y F +D YL L+++Y+P + Y+ Q ++ I
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 223 HKHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H HRDIKP NLLLD + +KL DFG K
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------------------- 171
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWS 340
Q+ R + S + + Y APE++ Y D WS
Sbjct: 172 -----------------------QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
G ++ E+L+G P F D V +I+ L P ++ ++
Sbjct: 209 AGCVLAELLLGQPIFPGDSGVDQLVEIIKV---LGTPTREQIR------------EMNPN 253
Query: 401 LGTLGSEQIKAHPWFK 416
QIKAHPW K
Sbjct: 254 YTEFKFPQIKAHPWTK 269
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 116/316 (36%), Gaps = 85/316 (26%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC-IVKL 171
+IG G+FG V + SG + A+KK+ + + +++ +R HC IV+L
Sbjct: 31 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK--------LDHCNIVRL 82
Query: 172 YYSF------QDAEYLYLIMEYLPGGDVXXX---XXXXXXXXXXVARFYIAQSVLAIESI 222
Y F +D YL L+++Y+P + Y+ Q ++ I
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 142
Query: 223 HKHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H HRDIKP NLLLD + +KL DFG K
Sbjct: 143 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------------------- 175
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWS 340
Q+ R + S + + Y APE++ Y D WS
Sbjct: 176 -----------------------QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 212
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
G ++ E+L+G P F D V +I+ L P ++ ++
Sbjct: 213 AGCVLAELLLGQPIFPGDSGVDQLVEIIKV---LGTPTREQIR------------EMNPN 257
Query: 401 LGTLGSEQIKAHPWFK 416
QIKAHPW K
Sbjct: 258 YTEFKFPQIKAHPWTK 273
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 116/316 (36%), Gaps = 85/316 (26%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC-IVKL 171
+IG G+FG V + SG + A+KK+ + + +++ +R HC IV+L
Sbjct: 28 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK--------LDHCNIVRL 79
Query: 172 YYSF------QDAEYLYLIMEYLPGGDVXXX---XXXXXXXXXXVARFYIAQSVLAIESI 222
Y F +D YL L+++Y+P + Y+ Q ++ I
Sbjct: 80 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 139
Query: 223 HKHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H HRDIKP NLLLD + +KL DFG K
Sbjct: 140 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------------------- 172
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWS 340
Q+ R + S + + Y APE++ Y D WS
Sbjct: 173 -----------------------QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 209
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
G ++ E+L+G P F D V +I+ L P ++ ++
Sbjct: 210 AGCVLAELLLGQPIFPGDSGVDQLVEIIKV---LGTPTREQIR------------EMNPN 254
Query: 401 LGTLGSEQIKAHPWFK 416
QIKAHPW K
Sbjct: 255 YTEFKFPQIKAHPWTK 270
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 318 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTC----RKIVHWKNH 373
TP Y+APEVL + Y CD WSLG IMY +L G+PPFYS+ R+I +
Sbjct: 192 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYG 251
Query: 374 LKFPEEARLTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWF 415
PE + ++ +AK LI LL D RL Q HPW
Sbjct: 252 FPNPEWSEVSEDAKQLIRLLLKTDPTERLTI---TQFMNHPWI 291
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 15/159 (9%)
Query: 105 VDDFDLL-TIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
DD+ L ++G G G+V C +++G A+K L S +R +V+H + A
Sbjct: 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK-ARQEVDH-----HWQASG 80
Query: 164 ASH--CIVKLYYSFQDAEY-LYLIMEYLPGGDVXXXXXXX--XXXXXXVARFYIAQSVLA 218
H CI+ +Y + + L +IME + GG++ A + A
Sbjct: 81 GPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTA 140
Query: 219 IESIHKHNYIHRDIKPDNLLL---DQNGHMKLSDFGLCK 254
I+ +H HN HRD+KP+NLL +++ +KL+DFG K
Sbjct: 141 IQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 116/274 (42%), Gaps = 61/274 (22%)
Query: 91 KETEYMRL--KRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRG 148
K+T Y+ + +R++ ++D + L +G G G+V + +K+G++ A+K++++S
Sbjct: 8 KQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSG----N 63
Query: 149 QVEHVRAERNLLAEVASH-C--IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXX 205
+ E+ R +L + SH C IV+ + +F +++ ME +
Sbjct: 64 KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM---GTCAEKLKKRMQGP 120
Query: 206 XVARFYIAQSVLAIESIH----KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNL 261
R +V +++++ KH IHRD+KP N+LLD+ G +KL DFG+ L
Sbjct: 121 IPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRL----- 175
Query: 262 SAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDY 321
+D + +GC AY P+
Sbjct: 176 -----------------VDDKAKDRSAGCA--------------------AYM---APER 195
Query: 322 IAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 355
I P K Y + D WSLG + E+ G P+
Sbjct: 196 IDPPDPTKPDYDIRADVWSLGISLVELATGQFPY 229
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 318 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTC----RKIVHWKNH 373
TP Y+APEVL + Y CD WSLG IMY +L G+PPFYS+ R+I +
Sbjct: 173 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYG 232
Query: 374 LKFPEEARLTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWF 415
PE + ++ +AK LI LL D RL Q HPW
Sbjct: 233 FPNPEWSEVSEDAKQLIRLLLKTDPTERLTIT---QFMNHPWI 272
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 15/159 (9%)
Query: 105 VDDFDLL-TIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
DD+ L ++G G G+V C +++G A+K L S +R +V+H + A
Sbjct: 8 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK-ARQEVDH-----HWQASG 61
Query: 164 ASH--CIVKLYYSFQDAEY-LYLIMEYLPGGDVXXXXXXX--XXXXXXVARFYIAQSVLA 218
H CI+ +Y + + L +IME + GG++ A + A
Sbjct: 62 GPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTA 121
Query: 219 IESIHKHNYIHRDIKPDNLLL---DQNGHMKLSDFGLCK 254
I+ +H HN HRD+KP+NLL +++ +KL+DFG K
Sbjct: 122 IQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 160
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 116/316 (36%), Gaps = 85/316 (26%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC-IVKL 171
+IG G+FG V + SG + A+KK+ + + +++ +R HC IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRK--------LDHCNIVRL 78
Query: 172 YYSF------QDAEYLYLIMEYLPGGDVXXX---XXXXXXXXXXVARFYIAQSVLAIESI 222
Y F +D YL L+++Y+P + Y+ Q ++ I
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 223 HKHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H HRDIKP NLLLD + +KL DFG K
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------------------- 171
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWS 340
Q+ R + S + + Y APE++ Y D WS
Sbjct: 172 -----------------------QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
G ++ E+L+G P F D V +I+ L P ++ ++
Sbjct: 209 AGCVLAELLLGQPIFPGDSGVDQLVEIIKV---LGTPTREQIR------------EMNPN 253
Query: 401 LGTLGSEQIKAHPWFK 416
QIKAHPW K
Sbjct: 254 YTEFKFPQIKAHPWTK 269
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 116/316 (36%), Gaps = 85/316 (26%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC-IVKL 171
+IG G+FG V + SG + A+KK+ + + +++ +R HC IV+L
Sbjct: 40 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK--------LDHCNIVRL 91
Query: 172 YYSF------QDAEYLYLIMEYLPGGDVXXX---XXXXXXXXXXVARFYIAQSVLAIESI 222
Y F +D YL L+++Y+P + Y+ Q ++ I
Sbjct: 92 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 151
Query: 223 HKHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H HRDIKP NLLLD + +KL DFG K
Sbjct: 152 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------------------- 184
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWS 340
Q+ R + S + + Y APE++ Y D WS
Sbjct: 185 -----------------------QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 221
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
G ++ E+L+G P F D V +I+ L P ++ ++
Sbjct: 222 AGCVLAELLLGQPIFPGDSGVDQLVEIIKV---LGTPTREQIR------------EMNPN 266
Query: 401 LGTLGSEQIKAHPWFK 416
QIKAHPW K
Sbjct: 267 YTEFKFPQIKAHPWTK 282
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 116/316 (36%), Gaps = 85/316 (26%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC-IVKL 171
+IG G+FG V + SG + A+KK+ + + +++ +R HC IV+L
Sbjct: 55 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK--------LDHCNIVRL 106
Query: 172 YYSF------QDAEYLYLIMEYLPGGDVXXX---XXXXXXXXXXVARFYIAQSVLAIESI 222
Y F +D YL L+++Y+P + Y+ Q ++ I
Sbjct: 107 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 166
Query: 223 HKHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H HRDIKP NLLLD + +KL DFG K
Sbjct: 167 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------------------- 199
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWS 340
Q+ R + S + + Y APE++ Y D WS
Sbjct: 200 -----------------------QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 236
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
G ++ E+L+G P F D V +I+ L P ++ ++
Sbjct: 237 AGCVLAELLLGQPIFPGDSGVDQLVEIIKV---LGTPTREQIR------------EMNPN 281
Query: 401 LGTLGSEQIKAHPWFK 416
QIKAHPW K
Sbjct: 282 YTEFKFPQIKAHPWTK 297
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 116/316 (36%), Gaps = 85/316 (26%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC-IVKL 171
+IG G+FG V + SG + A+KK+ + + +++ +R HC IV+L
Sbjct: 32 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK--------LDHCNIVRL 83
Query: 172 YYSF------QDAEYLYLIMEYLPGGDVXXX---XXXXXXXXXXVARFYIAQSVLAIESI 222
Y F +D YL L+++Y+P + Y+ Q ++ I
Sbjct: 84 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 143
Query: 223 HKHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H HRDIKP NLLLD + +KL DFG K
Sbjct: 144 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------------------- 176
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWS 340
Q+ R + S + + Y APE++ Y D WS
Sbjct: 177 -----------------------QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 213
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
G ++ E+L+G P F D V +I+ L P ++ ++
Sbjct: 214 AGCVLAELLLGQPIFPGDSGVDQLVEIIKV---LGTPTREQIR------------EMNPN 258
Query: 401 LGTLGSEQIKAHPWFK 416
QIKAHPW K
Sbjct: 259 YTEFKFPQIKAHPWTK 274
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 101/265 (38%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 86 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKSQKLTDDHV-QFLIYQILRGLKYIHS 143
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGLC+ D +
Sbjct: 144 ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYV-------------------- 183
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 184 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 116/316 (36%), Gaps = 85/316 (26%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC-IVKL 171
+IG G+FG V + SG + A+KK+ + + +++ +R HC IV+L
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK--------LDHCNIVRL 112
Query: 172 YYSF------QDAEYLYLIMEYLPGGDVXXX---XXXXXXXXXXVARFYIAQSVLAIESI 222
Y F +D YL L+++Y+P + Y+ Q ++ I
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 223 HKHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H HRDIKP NLLLD + +KL DFG K
Sbjct: 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------------------- 205
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWS 340
Q+ R + S + + Y APE++ Y D WS
Sbjct: 206 -----------------------QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 242
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
G ++ E+L+G P F D V +I+ L P ++ ++
Sbjct: 243 AGCVLAELLLGQPIFPGDSGVDQLVEIIKV---LGTPTREQIR------------EMNPN 287
Query: 401 LGTLGSEQIKAHPWFK 416
QIKAHPW K
Sbjct: 288 YTEFKFPQIKAHPWTK 303
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 116/316 (36%), Gaps = 85/316 (26%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC-IVKL 171
+IG G+FG V + SG + A+KK+ + + +++ +R HC IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK--------LDHCNIVRL 78
Query: 172 YYSF------QDAEYLYLIMEYLPGGDVXXX---XXXXXXXXXXVARFYIAQSVLAIESI 222
Y F +D YL L+++Y+P + Y+ Q ++ I
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 223 HKHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H HRDIKP NLLLD + +KL DFG K
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------------------- 171
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWS 340
Q+ R + S + + Y APE++ Y D WS
Sbjct: 172 -----------------------QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
G ++ E+L+G P F D V +I+ L P ++ ++
Sbjct: 209 AGCVLAELLLGQPIFPGDSGVDQLVEIIKV---LGTPTREQIR------------EMNPN 253
Query: 401 LGTLGSEQIKAHPWFK 416
QIKAHPW K
Sbjct: 254 YTEFKFPQIKAHPWTK 269
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 116/316 (36%), Gaps = 85/316 (26%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC-IVKL 171
+IG G+FG V + SG + A+KK+ + + +++ +R HC IV+L
Sbjct: 63 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK--------LDHCNIVRL 114
Query: 172 YYSF------QDAEYLYLIMEYLPGGDVXXX---XXXXXXXXXXVARFYIAQSVLAIESI 222
Y F +D YL L+++Y+P + Y+ Q ++ I
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 174
Query: 223 HKHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H HRDIKP NLLLD + +KL DFG K
Sbjct: 175 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------------------- 207
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWS 340
Q+ R + S + + Y APE++ Y D WS
Sbjct: 208 -----------------------QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 244
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
G ++ E+L+G P F D V +I+ L P ++ ++
Sbjct: 245 AGCVLAELLLGQPIFPGDSGVDQLVEIIKV---LGTPTREQIR------------EMNPN 289
Query: 401 LGTLGSEQIKAHPWFK 416
QIKAHPW K
Sbjct: 290 YTEFKFPQIKAHPWTK 305
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 95/250 (38%), Gaps = 67/250 (26%)
Query: 107 DFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH 166
F L+ +G G++GEV + K+ G +YA+K+ S RG + R LAEV SH
Sbjct: 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR---SMSPFRGPKDRARK----LAEVGSH 110
Query: 167 -------CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLA 218
C V+L ++++ LYL E L G + + Y+ ++LA
Sbjct: 111 EKVGQHPCCVRLEQAWEEGGILYLQTE-LCGPSLQQHCEAWGASLPEAQVWGYLRDTLLA 169
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+ +H +H D+KP N+ L G KL DFGL L +
Sbjct: 170 LAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE------------ 217
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
G P Y+APE LL+ YG D
Sbjct: 218 --------------------------------------GDPRYMAPE-LLQGSYGTAADV 238
Query: 339 WSLGAIMYEM 348
+SLG + E+
Sbjct: 239 FSLGLTILEV 248
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 116/316 (36%), Gaps = 85/316 (26%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC-IVKL 171
+IG G+FG V + SG + A+KK+ + + +++ +R HC IV+L
Sbjct: 65 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK--------LDHCNIVRL 116
Query: 172 YYSF------QDAEYLYLIMEYLPGGDVXXX---XXXXXXXXXXVARFYIAQSVLAIESI 222
Y F +D YL L+++Y+P + Y+ Q ++ I
Sbjct: 117 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 176
Query: 223 HKHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
H HRDIKP NLLLD + +KL DFG K
Sbjct: 177 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------------------- 209
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWS 340
Q+ R + S + + Y APE++ Y D WS
Sbjct: 210 -----------------------QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 246
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHR 400
G ++ E+L+G P F D V +I+ L P ++ ++
Sbjct: 247 AGCVLAELLLGQPIFPGDSGVDQLVEIIKV---LGTPTREQIR------------EMNPN 291
Query: 401 LGTLGSEQIKAHPWFK 416
QIKAHPW K
Sbjct: 292 YTEFKFPQIKAHPWTK 307
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 120/317 (37%), Gaps = 87/317 (27%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC-IVKL 171
+IG G+FG V + SG + A+KK+ + + +++ +R HC IV+L
Sbjct: 106 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK--------LDHCNIVRL 157
Query: 172 YYSF------QDAEYLYLIMEYLPGGDVXXX---XXXXXXXXXXVARFYIAQSVLAIESI 222
Y F +D YL L+++Y+P + Y+ Q ++ I
Sbjct: 158 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 217
Query: 223 HKHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCKPL--DCTNLSAIXXXXXXXXXXXXXSM 279
H HRDIKP NLLLD + +KL DFG K L N+S I
Sbjct: 218 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI--------------- 262
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWW 339
C R +++P +L + G DY + D W
Sbjct: 263 ----------CSRYYRAP------------ELIF---GATDYTS-----------SIDVW 286
Query: 340 SLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEH 399
S G ++ E+L+G P F D V +I+ L P ++ ++
Sbjct: 287 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKV---LGTPTREQIR------------EMNP 331
Query: 400 RLGTLGSEQIKAHPWFK 416
QIKAHPW K
Sbjct: 332 NYTEFKFPQIKAHPWTK 348
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 126/312 (40%), Gaps = 71/312 (22%)
Query: 107 DFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH 166
DF+ + ++G+GAFG+V + YA+KK++ +E ++ + +E LLA +
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVXLLASLNHQ 62
Query: 167 CIVKLYYSF-------------QDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIA 213
+V+ Y ++ + L++ EY + + +
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 214 QSVL-AIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK----PLDCTNLSAIXXXX 268
+ +L A+ IH IHR++KP N+ +D++ ++K+ DFGL K LD L +
Sbjct: 123 RQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS----- 177
Query: 269 XXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL 328
P S S +GT Y+A EVL
Sbjct: 178 --------------QNLPGSSDN--------------------LTSAIGTAXYVATEVLD 203
Query: 329 KKG-YGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFP---EEARLTP 384
G Y + D +SLG I +E + YP + V +K+ ++FP ++ +
Sbjct: 204 GTGHYNEKIDXYSLGIIFFEXI--YPFSTGXERVNILKKLRSVS--IEFPPDFDDNKXKV 259
Query: 385 EAKDLICRLLCD 396
E K I RLL D
Sbjct: 260 EKK--IIRLLID 269
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 121/348 (34%), Gaps = 85/348 (24%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
S F L +G G + V K +G A+K++K G E +L+ E+
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS--EEGTPSTAIREISLMKEL 60
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGG-----DVXXXXXXXXXXXXXVARFYIAQSVLA 218
IV+LY L L+ E++ D + +++ Q +
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQG 120
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+ H++ +HRD+KP NLL+++ G +KL DFGL
Sbjct: 121 LAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLA------------------------- 155
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECD 337
R + P+ S V T Y AP+VL+ + Y D
Sbjct: 156 -------------RAFGIPVNTFS-----------SEVVTLWYRAPDVLMGSRTYSTSID 191
Query: 338 WWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVH---------WKNHLKFPE---------- 378
WS G I+ EM+ G P F + + I W + K P+
Sbjct: 192 IWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPP 251
Query: 379 ---EARLTPEAKDLICRLLCDVEHRL------GTLGSEQIKAHPWFKD 417
L P K+ + L D H L L ++Q HPWF +
Sbjct: 252 RDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 103/268 (38%), Gaps = 62/268 (23%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
+ L+ +G GA+G V + KSG A+KKL + S + E LL +
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 111
Query: 168 IVKLYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
++ L F A L YL+ +L G D+ V +F I Q + ++
Sbjct: 112 VIGLLDVFTPATSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKY 169
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
IH + IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 170 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----------------- 212
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWS 340
RW Y APE++L Y M D WS
Sbjct: 213 ---------ATRW--------------------------YRAPEIMLNWMHYNMTVDIWS 237
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIV 368
+G IM E+L G F D + ++I+
Sbjct: 238 VGCIMAELLTGRTLFPGTDHINQLQQIM 265
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 318 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTC----RKIVHWKNH 373
TP Y+APEVL + Y CD WSLG IMY +L GYPPFYS+ + +I +
Sbjct: 232 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 291
Query: 374 LKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWF 415
PE + ++ E K LI LL + T+ + HPW
Sbjct: 292 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT--EFMNHPWI 331
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 22/171 (12%)
Query: 96 MRLKRHKISVDDFDLLT-IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
+++K++ I +DD+ + + ++G G G+V K++ +A+K L+ R H R
Sbjct: 58 LQIKKNAI-IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWR 116
Query: 155 AERNLLAEVASHC-----IVKLYYS-FQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA 208
A S C IV +Y + + + L ++ME L GG++
Sbjct: 117 A---------SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 167
Query: 209 RFY-IAQSV-LAIESIHKHNYIHRDIKPDNLLLDQ---NGHMKLSDFGLCK 254
I +S+ AI+ +H N HRD+KP+NLL N +KL+DFG K
Sbjct: 168 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 218
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 318 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTC----RKIVHWKNH 373
TP Y+APEVL + Y CD WSLG IMY +L GYPPFYS+ + +I +
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 285
Query: 374 LKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWF 415
PE + ++ E K LI LL + T+ + HPW
Sbjct: 286 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT--EFMNHPWI 325
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 22/171 (12%)
Query: 96 MRLKRHKISVDDFDLLT-IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
+++K++ I +DD+ + + ++G G G+V K++ +A+K L+ R H R
Sbjct: 52 LQIKKNAI-IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWR 110
Query: 155 AERNLLAEVASHC-----IVKLYYS-FQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA 208
A S C IV +Y + + + L ++ME L GG++
Sbjct: 111 A---------SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 161
Query: 209 RFY-IAQSV-LAIESIHKHNYIHRDIKPDNLLLDQ---NGHMKLSDFGLCK 254
I +S+ AI+ +H N HRD+KP+NLL N +KL+DFG K
Sbjct: 162 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 96/252 (38%), Gaps = 64/252 (25%)
Query: 110 LLTIIGRGAFGEVRLCQ----EKKSGNIYAMKKLKKSEMLSRGQVEHVR---AERNLLAE 162
L +G+G FG V +C+ + +G + A+KKL+ S EH+R E +L
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS------TEEHLRDFEREIEILKS 74
Query: 163 VASHCIVK---LYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLA 218
+ IVK + YS L LIMEYLP G + + Y +Q
Sbjct: 75 LQHDNIVKYKGVCYS-AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 133
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+E + YIHRD+ N+L++ +K+ DFGL K L
Sbjct: 134 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---------------------- 171
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
P+ + K P E W APE L + + + D
Sbjct: 172 -------PQDKEXXKVKEPGESPIFW-----------------YAPESLTESKFSVASDV 207
Query: 339 WSLGAIMYEMLV 350
WS G ++YE+
Sbjct: 208 WSFGVVLYELFT 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 96/252 (38%), Gaps = 64/252 (25%)
Query: 110 LLTIIGRGAFGEVRLCQ----EKKSGNIYAMKKLKKSEMLSRGQVEHVR---AERNLLAE 162
L +G+G FG V +C+ + +G + A+KKL+ S EH+R E +L
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS------TEEHLRDFEREIEILKS 98
Query: 163 VASHCIVK---LYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLA 218
+ IVK + YS L LIMEYLP G + + Y +Q
Sbjct: 99 LQHDNIVKYKGVCYS-AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 157
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+E + YIHRD+ N+L++ +K+ DFGL K L
Sbjct: 158 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---------------------- 195
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
P+ + K P E W APE L + + + D
Sbjct: 196 -------PQDKEXXKVKEPGESPIFW-----------------YAPESLTESKFSVASDV 231
Query: 339 WSLGAIMYEMLV 350
WS G ++YE+
Sbjct: 232 WSFGVVLYELFT 243
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 96/252 (38%), Gaps = 64/252 (25%)
Query: 110 LLTIIGRGAFGEVRLCQ----EKKSGNIYAMKKLKKSEMLSRGQVEHVR---AERNLLAE 162
L +G+G FG V +C+ + +G + A+KKL+ S EH+R E +L
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS------TEEHLRDFEREIEILKS 70
Query: 163 VASHCIVK---LYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLA 218
+ IVK + YS L LIMEYLP G + + Y +Q
Sbjct: 71 LQHDNIVKYKGVCYS-AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 129
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+E + YIHRD+ N+L++ +K+ DFGL K L
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---------------------- 167
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
P+ + K P E W APE L + + + D
Sbjct: 168 -------PQDKEXXKVKEPGESPIFW-----------------YAPESLTESKFSVASDV 203
Query: 339 WSLGAIMYEMLV 350
WS G ++YE+
Sbjct: 204 WSFGVVLYELFT 215
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 318 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTC----RKIVHWKNH 373
TP Y+APEVL + Y CD WSLG IMY +L GYPPFYS+ + +I +
Sbjct: 196 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 255
Query: 374 LKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWF 415
PE + ++ E K LI LL + T+ + HPW
Sbjct: 256 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI--TEFMNHPWI 295
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 22/171 (12%)
Query: 96 MRLKRHKISVDDFDLLT-IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
+++K++ I +DD+ + + ++G G G+V K++ +A+K L+ R H R
Sbjct: 22 LQIKKNAI-IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWR 80
Query: 155 AERNLLAEVASHC-----IVKLYYS-FQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA 208
A S C IV +Y + + + L ++ME L GG++
Sbjct: 81 A---------SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 131
Query: 209 RFY-IAQSV-LAIESIHKHNYIHRDIKPDNLLLDQ---NGHMKLSDFGLCK 254
I +S+ AI+ +H N HRD+KP+NLL N +KL+DFG K
Sbjct: 132 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 182
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 96/252 (38%), Gaps = 64/252 (25%)
Query: 110 LLTIIGRGAFGEVRLCQ----EKKSGNIYAMKKLKKSEMLSRGQVEHVR---AERNLLAE 162
L +G+G FG V +C+ + +G + A+KKL+ S EH+R E +L
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEILKS 70
Query: 163 VASHCIVK---LYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLA 218
+ IVK + YS L LIMEYLP G + + Y +Q
Sbjct: 71 LQHDNIVKYKGVCYS-AGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKG 129
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+E + YIHRD+ N+L++ +K+ DFGL K L
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---------------------- 167
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
P+ + K P E W APE L + + + D
Sbjct: 168 -------PQDKEXXKVKEPGESPIFW-----------------YAPESLTESKFSVASDV 203
Query: 339 WSLGAIMYEMLV 350
WS G ++YE+
Sbjct: 204 WSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 96/252 (38%), Gaps = 64/252 (25%)
Query: 110 LLTIIGRGAFGEVRLCQ----EKKSGNIYAMKKLKKSEMLSRGQVEHVR---AERNLLAE 162
L +G+G FG V +C+ + +G + A+KKL+ S EH+R E +L
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS------TEEHLRDFEREIEILKS 72
Query: 163 VASHCIVK---LYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLA 218
+ IVK + YS L LIMEYLP G + + Y +Q
Sbjct: 73 LQHDNIVKYKGVCYS-AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 131
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+E + YIHRD+ N+L++ +K+ DFGL K L
Sbjct: 132 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---------------------- 169
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
P+ + K P E W APE L + + + D
Sbjct: 170 -------PQDKEXXKVKEPGESPIFW-----------------YAPESLTESKFSVASDV 205
Query: 339 WSLGAIMYEMLV 350
WS G ++YE+
Sbjct: 206 WSFGVVLYELFT 217
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 96/252 (38%), Gaps = 64/252 (25%)
Query: 110 LLTIIGRGAFGEVRLCQ----EKKSGNIYAMKKLKKSEMLSRGQVEHVR---AERNLLAE 162
L +G+G FG V +C+ + +G + A+KKL+ S EH+R E +L
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS------TEEHLRDFEREIEILKS 71
Query: 163 VASHCIVK---LYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLA 218
+ IVK + YS L LIMEYLP G + + Y +Q
Sbjct: 72 LQHDNIVKYKGVCYS-AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 130
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+E + YIHRD+ N+L++ +K+ DFGL K L
Sbjct: 131 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---------------------- 168
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
P+ + K P E W APE L + + + D
Sbjct: 169 -------PQDKEXXKVKEPGESPIFW-----------------YAPESLTESKFSVASDV 204
Query: 339 WSLGAIMYEMLV 350
WS G ++YE+
Sbjct: 205 WSFGVVLYELFT 216
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 96/252 (38%), Gaps = 64/252 (25%)
Query: 110 LLTIIGRGAFGEVRLCQ----EKKSGNIYAMKKLKKSEMLSRGQVEHVR---AERNLLAE 162
L +G+G FG V +C+ + +G + A+KKL+ S EH+R E +L
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS------TEEHLRDFEREIEILKS 73
Query: 163 VASHCIVK---LYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLA 218
+ IVK + YS L LIMEYLP G + + Y +Q
Sbjct: 74 LQHDNIVKYKGVCYS-AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 132
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+E + YIHRD+ N+L++ +K+ DFGL K L
Sbjct: 133 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---------------------- 170
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
P+ + K P E W APE L + + + D
Sbjct: 171 -------PQDKEXXKVKEPGESPIFW-----------------YAPESLTESKFSVASDV 206
Query: 339 WSLGAIMYEMLV 350
WS G ++YE+
Sbjct: 207 WSFGVVLYELFT 218
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 96/252 (38%), Gaps = 64/252 (25%)
Query: 110 LLTIIGRGAFGEVRLCQ----EKKSGNIYAMKKLKKSEMLSRGQVEHVR---AERNLLAE 162
L +G+G FG V +C+ + +G + A+KKL+ S EH+R E +L
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS------TEEHLRDFEREIEILKS 67
Query: 163 VASHCIVK---LYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLA 218
+ IVK + YS L LIMEYLP G + + Y +Q
Sbjct: 68 LQHDNIVKYKGVCYS-AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+E + YIHRD+ N+L++ +K+ DFGL K L
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---------------------- 164
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
P+ + K P E W APE L + + + D
Sbjct: 165 -------PQDKEXXKVKEPGESPIFW-----------------YAPESLTESKFSVASDV 200
Query: 339 WSLGAIMYEMLV 350
WS G ++YE+
Sbjct: 201 WSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 96/252 (38%), Gaps = 64/252 (25%)
Query: 110 LLTIIGRGAFGEVRLCQ----EKKSGNIYAMKKLKKSEMLSRGQVEHVR---AERNLLAE 162
L +G+G FG V +C+ + +G + A+KKL+ S EH+R E +L
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEILKS 66
Query: 163 VASHCIVK---LYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLA 218
+ IVK + YS L LIMEYLP G + + Y +Q
Sbjct: 67 LQHDNIVKYKGVCYS-AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 125
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+E + YIHRD+ N+L++ +K+ DFGL K L
Sbjct: 126 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---------------------- 163
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
P+ + K P E W APE L + + + D
Sbjct: 164 -------PQDKEXXKVKEPGESPIFW-----------------YAPESLTESKFSVASDV 199
Query: 339 WSLGAIMYEMLV 350
WS G ++YE+
Sbjct: 200 WSFGVVLYELFT 211
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 318 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTC----RKIVHWKNH 373
TP Y+APEVL + Y CD WSLG IMY +L GYPPFYS+ + +I +
Sbjct: 182 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 241
Query: 374 LKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWF 415
PE + ++ E K LI LL + T+ + HPW
Sbjct: 242 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT--EFMNHPWI 281
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 22/171 (12%)
Query: 96 MRLKRHKISVDDFDLLT-IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
+++K++ I +DD+ + + ++G G G+V K++ +A+K L+ R H R
Sbjct: 8 LQIKKNAI-IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWR 66
Query: 155 AERNLLAEVASHC-----IVKLYYS-FQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA 208
A S C IV +Y + + + L ++ME L GG++
Sbjct: 67 A---------SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 117
Query: 209 RFY-IAQSV-LAIESIHKHNYIHRDIKPDNLLLDQ---NGHMKLSDFGLCK 254
I +S+ AI+ +H N HRD+KP+NLL N +KL+DFG K
Sbjct: 118 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 318 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTC----RKIVHWKNH 373
TP Y+APEVL + Y CD WSLG IMY +L GYPPFYS+ + +I +
Sbjct: 182 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 241
Query: 374 LKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWF 415
PE + ++ E K LI LL + T+ + HPW
Sbjct: 242 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT--EFMNHPWI 281
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 22/171 (12%)
Query: 96 MRLKRHKISVDDFDLLT-IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
+++K++ I +DD+ + + ++G G G+V K++ +A+K L+ R H R
Sbjct: 8 LQIKKNAI-IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWR 66
Query: 155 AERNLLAEVASHC-----IVKLYYS-FQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA 208
A S C IV +Y + + + L ++ME L GG++
Sbjct: 67 A---------SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 117
Query: 209 RFY-IAQSV-LAIESIHKHNYIHRDIKPDNLLLDQ---NGHMKLSDFGLCK 254
I +S+ AI+ +H N HRD+KP+NLL N +KL+DFG K
Sbjct: 118 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 318 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTC----RKIVHWKNH 373
TP Y+APEVL + Y CD WSLG IMY +L GYPPFYS+ + +I +
Sbjct: 188 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 247
Query: 374 LKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWF 415
PE + ++ E K LI LL + T+ + HPW
Sbjct: 248 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI--TEFMNHPWI 287
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 22/171 (12%)
Query: 96 MRLKRHKISVDDFDLLT-IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
+++K++ I +DD+ + + ++G G G+V K++ +A+K L+ R H R
Sbjct: 14 LQIKKNAI-IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWR 72
Query: 155 AERNLLAEVASHC-----IVKLYYS-FQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA 208
A S C IV +Y + + + L ++ME L GG++
Sbjct: 73 A---------SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 123
Query: 209 RFY-IAQSV-LAIESIHKHNYIHRDIKPDNLLLDQ---NGHMKLSDFGLCK 254
I +S+ AI+ +H N HRD+KP+NLL N +KL+DFG K
Sbjct: 124 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 174
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 96/252 (38%), Gaps = 64/252 (25%)
Query: 110 LLTIIGRGAFGEVRLCQ----EKKSGNIYAMKKLKKSEMLSRGQVEHVR---AERNLLAE 162
L +G+G FG V +C+ + +G + A+KKL+ S EH+R E +L
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEILKS 67
Query: 163 VASHCIVK---LYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLA 218
+ IVK + YS L LIMEYLP G + + Y +Q
Sbjct: 68 LQHDNIVKYKGVCYS-AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+E + YIHRD+ N+L++ +K+ DFGL K L
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---------------------- 164
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
P+ + K P E W APE L + + + D
Sbjct: 165 -------PQDKEXXKVKEPGESPIFW-----------------YAPESLTESKFSVASDV 200
Query: 339 WSLGAIMYEMLV 350
WS G ++YE+
Sbjct: 201 WSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 96/252 (38%), Gaps = 64/252 (25%)
Query: 110 LLTIIGRGAFGEVRLCQ----EKKSGNIYAMKKLKKSEMLSRGQVEHVR---AERNLLAE 162
L +G+G FG V +C+ + +G + A+KKL+ S EH+R E +L
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEILKS 65
Query: 163 VASHCIVK---LYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLA 218
+ IVK + YS L LIMEYLP G + + Y +Q
Sbjct: 66 LQHDNIVKYKGVCYS-AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 124
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+E + YIHRD+ N+L++ +K+ DFGL K L
Sbjct: 125 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---------------------- 162
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
P+ + K P E W APE L + + + D
Sbjct: 163 -------PQDKEXXKVKEPGESPIFW-----------------YAPESLTESKFSVASDV 198
Query: 339 WSLGAIMYEMLV 350
WS G ++YE+
Sbjct: 199 WSFGVVLYELFT 210
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 318 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTC----RKIVHWKNH 373
TP Y+APEVL + Y CD WSLG IMY +L GYPPFYS+ + +I +
Sbjct: 187 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 246
Query: 374 LKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWF 415
PE + ++ E K LI LL + T+ + HPW
Sbjct: 247 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT--EFMNHPWI 286
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 22/171 (12%)
Query: 96 MRLKRHKISVDDFDLLT-IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
+++K++ I +DD+ + + ++G G G+V K++ +A+K L+ R H R
Sbjct: 13 LQIKKNAI-IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWR 71
Query: 155 AERNLLAEVASHC-----IVKLYYS-FQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA 208
A S C IV +Y + + + L ++ME L GG++
Sbjct: 72 A---------SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 122
Query: 209 RFY-IAQSV-LAIESIHKHNYIHRDIKPDNLLLDQ---NGHMKLSDFGLCK 254
I +S+ AI+ +H N HRD+KP+NLL N +KL+DFG K
Sbjct: 123 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 173
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 318 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTC----RKIVHWKNH 373
TP Y+APEVL + Y CD WSLG IMY +L GYPPFYS+ + +I +
Sbjct: 186 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 245
Query: 374 LKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWF 415
PE + ++ E K LI LL + T+ + HPW
Sbjct: 246 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT--EFMNHPWI 285
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 22/171 (12%)
Query: 96 MRLKRHKISVDDFDLLT-IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
+++K++ I +DD+ + + ++G G G+V K++ +A+K L+ R H R
Sbjct: 12 LQIKKNAI-IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWR 70
Query: 155 AERNLLAEVASHC-----IVKLYYS-FQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA 208
A S C IV +Y + + + L ++ME L GG++
Sbjct: 71 A---------SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 121
Query: 209 RFY-IAQSV-LAIESIHKHNYIHRDIKPDNLLLDQ---NGHMKLSDFGLCK 254
I +S+ AI+ +H N HRD+KP+NLL N +KL+DFG K
Sbjct: 122 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 172
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 318 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTC----RKIVHWKNH 373
TP Y+APEVL + Y CD WSLG IMY +L GYPPFYS+ + +I +
Sbjct: 180 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 239
Query: 374 LKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWF 415
PE + ++ E K LI LL + T+ + HPW
Sbjct: 240 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI--TEFMNHPWI 279
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 22/171 (12%)
Query: 96 MRLKRHKISVDDFDLLT-IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
+++K++ I +DD+ + + ++G G G+V K++ +A+K L+ R H R
Sbjct: 6 LQIKKNAI-IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWR 64
Query: 155 AERNLLAEVASHC-----IVKLYYS-FQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA 208
A S C IV +Y + + + L ++ME L GG++
Sbjct: 65 A---------SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 115
Query: 209 RFY-IAQSV-LAIESIHKHNYIHRDIKPDNLLLDQ---NGHMKLSDFGLCK 254
I +S+ AI+ +H N HRD+KP+NLL N +KL+DFG K
Sbjct: 116 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 166
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 318 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTC----RKIVHWKNH 373
TP Y+APEVL + Y CD WSLG IMY +L GYPPFYS+ + +I +
Sbjct: 180 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 239
Query: 374 LKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWF 415
PE + ++ E K LI LL + T+ + HPW
Sbjct: 240 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT--EFMNHPWI 279
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 22/171 (12%)
Query: 96 MRLKRHKISVDDFDLLT-IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
+++K++ I +DD+ + + ++G G G+V K++ +A+K L+ R H R
Sbjct: 6 LQIKKNAI-IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWR 64
Query: 155 AERNLLAEVASHC-----IVKLYYS-FQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA 208
A S C IV +Y + + + L ++ME L GG++
Sbjct: 65 A---------SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 115
Query: 209 RFY-IAQSV-LAIESIHKHNYIHRDIKPDNLLLDQ---NGHMKLSDFGLCK 254
I +S+ AI+ +H N HRD+KP+NLL N +KL+DFG K
Sbjct: 116 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 166
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 134/346 (38%), Gaps = 99/346 (28%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKK---SEMLSRGQVEHVRAERNLLAEVASHC 167
L +G GA+G V + ++G A+KKL + SE+ ++ +R LL +
Sbjct: 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELR----LLKHMRHEN 85
Query: 168 IVKLYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
++ L F E L YL+M ++ G D+ + +F + Q + +
Sbjct: 86 VIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRI-QFLVYQMLKGLRY 143
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
IH IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 144 IHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVT--------------- 188
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWS 340
RW Y APEV+L Y D WS
Sbjct: 189 -----------RW--------------------------YRAPEVILNWMRYTQTVDIWS 211
Query: 341 LGAIMYEMLVGYPPFYSDDPVTTCRKIV-----------------HWKNHLK-FPEEAR- 381
+G IM EM+ G F D + ++I+ KN++K PE +
Sbjct: 212 VGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKK 271
Query: 382 --------LTPEAKDLICRLLC-DVEHRLGTLGSEQIKAHPWFKDI 418
+P A +L+ ++L D E R+ T G + AHP+F+ +
Sbjct: 272 DFASILTNASPLAVNLLEKMLVLDAEQRV-TAG--EALAHPYFESL 314
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 318 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTC----RKIVHWKNH 373
TP Y+APEVL + Y CD WSLG IMY +L GYPPFYS+ + +I +
Sbjct: 181 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 240
Query: 374 LKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWF 415
PE + ++ E K LI LL + T+ + HPW
Sbjct: 241 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI--TEFMNHPWI 280
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 22/171 (12%)
Query: 96 MRLKRHKISVDDFDLLT-IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
+++K++ I +DD+ + + ++G G G+V K++ +A+K L+ R H R
Sbjct: 7 LQIKKNAI-IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWR 65
Query: 155 AERNLLAEVASHC-----IVKLYYS-FQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA 208
A S C IV +Y + + + L ++ME L GG++
Sbjct: 66 A---------SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 116
Query: 209 RFY-IAQSV-LAIESIHKHNYIHRDIKPDNLLLDQ---NGHMKLSDFGLCK 254
I +S+ AI+ +H N HRD+KP+NLL N +KL+DFG K
Sbjct: 117 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 167
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 131/345 (37%), Gaps = 104/345 (30%)
Query: 112 TIIGRGAFGEVRLCQEKKSGNIYAMKKLKK---SEMLSRGQVEHVRAERNLL--AEVASH 166
T +G GA+G V +K+SG A+KKL + SE+ ++ RA R LL +
Sbjct: 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAK------RAYRELLLLKHMQHE 101
Query: 167 CIVKLYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIE 220
++ L F A L YL+M ++ ++ + Q + ++
Sbjct: 102 NVIGLLDVFTPASSLRNFYDFYLVMPFM---QTDLQKIMGMEFSEEKIQYLVYQMLKGLK 158
Query: 221 SIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMD 280
IH +HRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 159 YIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVT-------------- 204
Query: 281 VDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWW 339
RW Y APEV+L Y D W
Sbjct: 205 ------------RW--------------------------YRAPEVILSWMHYNQTVDIW 226
Query: 340 SLGAIMYEMLVGYPPFYSDDPVTTCRKIVH-----------------WKNHLK-FPEE-- 379
S+G IM EML G F D + +I+ K++++ P+
Sbjct: 227 SVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPR 286
Query: 380 -------ARLTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFK 416
R +P+A DL+ ++L DV+ R L + Q HP+F+
Sbjct: 287 KDFTQLFPRASPQAADLLEKMLELDVDKR---LTAAQALTHPFFE 328
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 96/252 (38%), Gaps = 64/252 (25%)
Query: 110 LLTIIGRGAFGEVRLCQ----EKKSGNIYAMKKLKKSEMLSRGQVEHVR---AERNLLAE 162
L +G+G FG V +C+ + +G + A+KKL+ S EH+R E +L
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS------TEEHLRDFEREIEILKS 85
Query: 163 VASHCIVK---LYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLA 218
+ IVK + YS L LIMEYLP G + + Y +Q
Sbjct: 86 LQHDNIVKYKGVCYS-AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+E + YIHRD+ N+L++ +K+ DFGL K L
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---------------------- 182
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
P+ + K P E W APE L + + + D
Sbjct: 183 -------PQDKEXXKVKEPGESPIFW-----------------YAPESLTESKFSVASDV 218
Query: 339 WSLGAIMYEMLV 350
WS G ++YE+
Sbjct: 219 WSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 96/252 (38%), Gaps = 64/252 (25%)
Query: 110 LLTIIGRGAFGEVRLCQ----EKKSGNIYAMKKLKKSEMLSRGQVEHVR---AERNLLAE 162
L +G+G FG V +C+ + +G + A+KKL+ S EH+R E +L
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS------TEEHLRDFEREIEILKS 85
Query: 163 VASHCIVK---LYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLA 218
+ IVK + YS L LIMEYLP G + + Y +Q
Sbjct: 86 LQHDNIVKYKGVCYS-AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+E + YIHRD+ N+L++ +K+ DFGL K L
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---------------------- 182
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
P+ + K P E W APE L + + + D
Sbjct: 183 -------PQDKEXXKVKEPGESPIFW-----------------YAPESLTESKFSVASDV 218
Query: 339 WSLGAIMYEMLV 350
WS G ++YE+
Sbjct: 219 WSFGVVLYELFT 230
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 318 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTC----RKIVHWKNH 373
TP Y+APEVL + Y CD WSLG I Y +L GYPPFYS+ + +I +
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYE 285
Query: 374 LKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWF 415
PE + ++ E K LI LL + T+ + HPW
Sbjct: 286 FPNPEWSEVSEEVKXLIRNLLKTEPTQRXTIT--EFXNHPWI 325
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 22/171 (12%)
Query: 96 MRLKRHKISVDDFDLLT-IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
+++K++ I +DD+ + + ++G G G+V K++ +A+K L+ R H R
Sbjct: 52 LQIKKNAI-IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWR 110
Query: 155 AERNLLAEVASHC-----IVKLYYS-FQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA 208
A S C IV +Y + + + L ++ E L GG++
Sbjct: 111 A---------SQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTER 161
Query: 209 RFY-IAQSV-LAIESIHKHNYIHRDIKPDNLLLDQ---NGHMKLSDFGLCK 254
I +S+ AI+ +H N HRD+KP+NLL N +KL+DFG K
Sbjct: 162 EASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 102/253 (40%), Gaps = 61/253 (24%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
DDF+ ++ +G G G V K SG + A +KL E+ + + +R E +L E S
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIR-ELQVLHECNS 66
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI--- 222
IV Y +F + + ME++ GG + + S+ I+ +
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG---KVSIAVIKGLTYL 123
Query: 223 -HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
KH +HRD+KP N+L++ G +KL DFG+ L +
Sbjct: 124 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL------------------------I 159
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 341
D ++A VGT Y++PE L Y ++ D WS+
Sbjct: 160 D---------------------------EMANEFVGTRSYMSPERLQGTHYSVQSDIWSM 192
Query: 342 GAIMYEMLVG-YP 353
G + EM VG YP
Sbjct: 193 GLSLVEMAVGRYP 205
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 120/284 (42%), Gaps = 68/284 (23%)
Query: 99 KRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
+R + +D F + + G+G FG V+L +EK +G A+KK+ + +++ ++
Sbjct: 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQD--- 72
Query: 159 LLAEVASHCIVKL---YYSFQDAE----YLYLIMEYLPGG---DVXXXXXXXXXXXXXVA 208
LA + IV+L +Y+ + + YL ++MEY+P +
Sbjct: 73 -LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILI 131
Query: 209 RFYIAQSVLAIESIH--KHNYIHRDIKPDNLLLDQ-NGHMKLSDFGLCKPLDCTNLSAIX 265
+ ++ Q + +I +H N HRDIKP N+L+++ +G +KL DFG K L
Sbjct: 132 KVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL--------- 182
Query: 266 XXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPE 325
SP E +AY + + Y APE
Sbjct: 183 ------------------------------SPSEP---------NVAY--ICSRYYRAPE 201
Query: 326 VLL-KKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIV 368
++ + Y D WS+G I EM++G P F D+ +IV
Sbjct: 202 LIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV 245
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 96/252 (38%), Gaps = 64/252 (25%)
Query: 110 LLTIIGRGAFGEVRLCQ----EKKSGNIYAMKKLKKSEMLSRGQVEHVR---AERNLLAE 162
L +G+G FG V +C+ + +G + A+KKL+ S EH+R E +L
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS------TEEHLRDFEREIEILKS 70
Query: 163 VASHCIVK---LYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLA 218
+ IVK + YS L LIME+LP G + + Y +Q
Sbjct: 71 LQHDNIVKYKGVCYS-AGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKG 129
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+E + YIHRD+ N+L++ +K+ DFGL K L
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---------------------- 167
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
P+ + K P E W APE L + + + D
Sbjct: 168 -------PQDKEXXKVKEPGESPIFW-----------------YAPESLTESKFSVASDV 203
Query: 339 WSLGAIMYEMLV 350
WS G ++YE+
Sbjct: 204 WSFGVVLYELFT 215
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 131/345 (37%), Gaps = 104/345 (30%)
Query: 112 TIIGRGAFGEVRLCQEKKSGNIYAMKKLKK---SEMLSRGQVEHVRAERNLL--AEVASH 166
T +G GA+G V +K+SG A+KKL + SE+ ++ RA R LL +
Sbjct: 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAK------RAYRELLLLKHMQHE 83
Query: 167 CIVKLYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIE 220
++ L F A L YL+M ++ ++ + Q + ++
Sbjct: 84 NVIGLLDVFTPASSLRNFYDFYLVMPFM---QTDLQKIMGLKFSEEKIQYLVYQMLKGLK 140
Query: 221 SIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMD 280
IH +HRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 141 YIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVT-------------- 186
Query: 281 VDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWW 339
RW Y APEV+L Y D W
Sbjct: 187 ------------RW--------------------------YRAPEVILSWMHYNQTVDIW 208
Query: 340 SLGAIMYEMLVGYPPFYSDDPVTTCRKIVH-----------------WKNHLK-FPEE-- 379
S+G IM EML G F D + +I+ K++++ P+
Sbjct: 209 SVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPR 268
Query: 380 -------ARLTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFK 416
R +P+A DL+ ++L DV+ R L + Q HP+F+
Sbjct: 269 KDFTQLFPRASPQAADLLEKMLELDVDKR---LTAAQALTHPFFE 310
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 96/252 (38%), Gaps = 64/252 (25%)
Query: 110 LLTIIGRGAFGEVRLCQ----EKKSGNIYAMKKLKKSEMLSRGQVEHVR---AERNLLAE 162
L +G+G FG V +C+ + +G + A+KKL+ S EH+R E +L
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEILKS 67
Query: 163 VASHCIVK---LYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLA 218
+ IVK + YS L LIMEYLP G + + Y +Q
Sbjct: 68 LQHDNIVKYKGVCYS-AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+E + YIHRD+ N+L++ +K+ DFGL K L
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---------------------- 164
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
P+ + K P E W APE L + + + D
Sbjct: 165 -------PQDKEFFKVKEPGESPIFW-----------------YAPESLTESKFSVASDV 200
Query: 339 WSLGAIMYEMLV 350
WS G ++YE+
Sbjct: 201 WSFGVVLYELFT 212
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 124/344 (36%), Gaps = 89/344 (25%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
++ L IG G +G V + +++ I A+K+++ + G E LL E+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKN 62
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNY 227
IV+L+ + L L+ E+ + + ++ Q + + H N
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122
Query: 228 IHRDIKPDNLLLDQNGHMKLSDFGLCK----PLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
+HRD+KP NLL+++NG +KL++FGL + P+ C + +
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTL----------------- 165
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLG 342
W P P+VL K Y D WS G
Sbjct: 166 ----------WYRP--------------------------PDVLFGAKLYSTSIDMWSAG 189
Query: 343 AIMYEML-VGYPPFYSDDPVTTCRKIV---------HWKNHLKFPE-------------- 378
I E+ G P F +D ++I W + K P+
Sbjct: 190 CIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLV 249
Query: 379 --EARLTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
+L +DL+ LL C+ R + +E+ HP+F D
Sbjct: 250 NVVPKLNATGRDLLQNLLKCNPVQR---ISAEEALQHPYFSDFC 290
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 102/265 (38%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G+ A+KKL + S + E LL + ++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 86 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 143
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D D
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----------------------DEMAG 181
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
F RW Y APE++L Y D WS+G
Sbjct: 182 F----VATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 101/265 (38%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G+ A+KKL + S + E LL + ++
Sbjct: 47 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 105
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 106 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 163
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXV-------------------- 203
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 204 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 231
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 232 IMAELLTGRTLFPGTDHIDQLKLIL 256
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 102/265 (38%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G+ A+KKL + S + E LL + ++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 86 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 143
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D D
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----------------------DEMAG 181
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
F RW Y APE++L Y D WS+G
Sbjct: 182 F----VATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 122/344 (35%), Gaps = 89/344 (25%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
++ L IG G +G V + +++ I A+K+++ + G E LL E+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKN 62
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNY 227
IV+L+ + L L+ E+ + + ++ Q + + H N
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122
Query: 228 IHRDIKPDNLLLDQNGHMKLSDFGLCK----PLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
+HRD+KP NLL+++NG +KL+DFGL + P+ C + +
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTL----------------- 165
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLG 342
W P P+VL K Y D WS G
Sbjct: 166 ----------WYRP--------------------------PDVLFGAKLYSTSIDMWSAG 189
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIV----------HWKNHLKFPE-------------- 378
I E+ P + + V K + W + K P+
Sbjct: 190 CIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLV 249
Query: 379 --EARLTPEAKDLICRLL-CDVEHRLGTLGSEQIKAHPWFKDIA 419
+L +DL+ LL C+ R + +E+ HP+F D
Sbjct: 250 NVVPKLNATGRDLLQNLLKCNPVQR---ISAEEALQHPYFSDFC 290
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 7/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I + L+ +G G FGEV + S + A+K LK M V+ E NL+
Sbjct: 9 EIPRESIKLVKRLGAGQFGEVWMGYYNNSTKV-AVKTLKPGTM----SVQAFLEEANLMK 63
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF--YIAQSVLAI 219
+ +V+LY E +Y+I EY+ G + + + + AQ +
Sbjct: 64 TLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGM 123
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
I + NYIHRD++ N+L+ ++ K++DFGL + ++ +A
Sbjct: 124 AYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA 167
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 101/265 (38%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G+ A+KKL + S + E LL + ++
Sbjct: 33 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 91
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 92 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 149
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 189
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 190 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 218 IMAELLTGRTLFPGTDHIDQLKLIL 242
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 101/265 (38%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G+ A+KKL + S + E LL + ++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 86 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 143
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 183
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 184 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 102/265 (38%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G+ A+KKL + S + E LL + ++
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 81
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 82 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 139
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D D
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----------------------DEMAG 177
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
F RW Y APE++L Y D WS+G
Sbjct: 178 F----VATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 207
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 208 IMAELLTGRTLFPGTDHIDQLKLIL 232
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 101/265 (38%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G+ A+KKL + S + E LL + ++
Sbjct: 47 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 105
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 106 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 163
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 203
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 204 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 231
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 232 IMAELLTGRTLFPGTDHIDQLKLIL 256
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 101/265 (38%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G+ A+KKL + S + E LL + ++
Sbjct: 46 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 104
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 105 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 162
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 163 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 202
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 203 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 230
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 231 IMAELLTGRTLFPGTDHIDQLKLIL 255
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 36/252 (14%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKK--SEMLSRGQVEHVRAERNLLAEV 163
D++++ +IGRG++G V L +K + A+KK+ + +++ + + E +L +
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLI---DCKRILREITILNRL 84
Query: 164 ASHCIVKLY-----YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLA 218
S I++L+ + LY+++E + D+ + + +L
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEQHVKTILYNLLLG 143
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+ IH+ IHRD+KP N LL+Q+ +K+ DFGL + ++ I
Sbjct: 144 EKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVN------------ 191
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPE-VLLKKGYGMECD 337
D++ + G K N +K S V T Y APE +LL++ Y D
Sbjct: 192 -DLEEKEENEEPGPHNK-----------NLKKQLTSHVVTRWYRAPELILLQENYTNSID 239
Query: 338 WWSLGAIMYEML 349
WS G I E+L
Sbjct: 240 IWSTGCIFAELL 251
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 105/264 (39%), Gaps = 66/264 (25%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
+ +D L IGRGA+G V K SG I A+K++ R V+ + ++ LL ++
Sbjct: 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRI-------RSTVDE-KEQKQLLMDL 71
Query: 164 -----ASHC--IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSV 216
+S C IV+ Y + ++ ME + + + +
Sbjct: 72 DVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKIT 131
Query: 217 LAIESIHKH-----NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXX 271
LA H IHRDIKP N+LLD++G++KL DFG+ L
Sbjct: 132 LATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL--------------- 176
Query: 272 XXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKG 331
+D + ++GC R +A P+ I P ++G
Sbjct: 177 -------VDSIAKTRDAGC-----------------RPYMA------PERIDPSA-SRQG 205
Query: 332 YGMECDWWSLGAIMYEMLVGYPPF 355
Y + D WSLG +YE+ G P+
Sbjct: 206 YDVRSDVWSLGITLYELATGRFPY 229
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 33 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 91
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 92 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 149
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 150 ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV-------------------- 189
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 190 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 218 IMAELLTGRTLFPGTDHIDQLKLIL 242
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 104/250 (41%), Gaps = 35/250 (14%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
D++ + +IGRG++G V L +K + A+KK+ + + + E +L + S
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRM-FEDLIDCKRILREITILNRLKS 84
Query: 166 HCIVKLYY-----SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIE 220
I++LY + LY+++E + D+ + + +L
Sbjct: 85 DYIIRLYDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEEHIKTILYNLLLGEN 143
Query: 221 SIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMD 280
IH+ IHRD+KP N LL+Q+ +K+ DFGL + ++ + I
Sbjct: 144 FIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENE-------- 195
Query: 281 VDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPE-VLLKKGYGMECDWW 339
E G + N +K S V T Y APE +LL++ Y D W
Sbjct: 196 ------EPGPHNK-------------NLKKQLTSHVVTRWYRAPELILLQENYTKSIDIW 236
Query: 340 SLGAIMYEML 349
S G I E+L
Sbjct: 237 STGCIFAELL 246
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 101/265 (38%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G+ A+KKL + S + E LL + ++
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 81
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 82 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCAKLTDDHV-QFLIYQILRGLKYIHS 139
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 179
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 180 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 207
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 208 IMAELLTGRTLFPGTDHIDQLKLIL 232
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 101/265 (38%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G+ A+KKL + S + E LL + ++
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 81
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 82 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 139
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 179
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 180 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 207
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 208 IMAELLTGRTLFPGTDHIDQLKLIL 232
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 29 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 87
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 88 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 145
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 146 ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV-------------------- 185
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 186 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 213
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 214 IMAELLTGRTLFPGTDHIDQLKLIL 238
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 121/333 (36%), Gaps = 88/333 (26%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G G + V + K + N+ A+K+++ G E +LL ++ IV L+
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEH--EEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIK 233
+ L L+ EYL + ++ Q + + H+ +HRD+K
Sbjct: 68 IIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLK 127
Query: 234 PDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRR 293
P NLL+++ G +KL+DFGL + + + + ++
Sbjct: 128 PQNLLINERGELKLADFGLAR-----------------------AKSIPTKTYDNEVVTL 164
Query: 294 WKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEMLVGY 352
W P P++LL Y + D W +G I YEM G
Sbjct: 165 WYRP--------------------------PDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
Query: 353 PPFYSDDPVTTCRKIVHW------------------------KNHLKFPEEA------RL 382
P F P +T + +H+ N+ K+ EA RL
Sbjct: 199 PLF----PGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRL 254
Query: 383 TPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWF 415
+ DL+ +LL E R + +E HP+F
Sbjct: 255 DSDGADLLTKLL-QFEGR-NRISAEDAMKHPFF 285
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ IG GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 32 LSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 90
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 91 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 148
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 149 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV-------------------- 188
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 189 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 216
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 217 IMAELLTGRTLFPGTDHIDQLKLIL 241
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL K S + E LL + ++
Sbjct: 39 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKP-FQSIIHAKRTYRELRLLKHMKHENVIG 97
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 98 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 155
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 195
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 196 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 223
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 224 IMAELLTGRTLFPGTDHIDQLKLIL 248
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 101/265 (38%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 86 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKXQKLTDDHV-QFLIYQILRGLKYIHS 143
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 144 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV-------------------- 183
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 184 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L +G GA+G V + K+G+ A+KKL + S + E LL + ++
Sbjct: 37 LAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 95
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 96 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 153
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 154 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 193
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 194 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 221
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 222 IMAELLTGRTLFPGTDHIDQLKLIL 246
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 96/252 (38%), Gaps = 64/252 (25%)
Query: 110 LLTIIGRGAFGEVRLCQ----EKKSGNIYAMKKLKKSEMLSRGQVEHVR---AERNLLAE 162
L +G+G FG V +C+ + +G + A+KKL+ S EH+R E +L
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEILKS 68
Query: 163 VASHCIVK---LYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLA 218
+ IVK + YS L LIMEYLP G + + Y +Q
Sbjct: 69 LQHDNIVKYKGVCYS-AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 127
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+E + YIHR++ N+L++ +K+ DFGL K L
Sbjct: 128 MEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVL---------------------- 165
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
P+ + K P E W APE L + + + D
Sbjct: 166 -------PQDKEYYKVKEPGESPIFW-----------------YAPESLTESKFSVASDV 201
Query: 339 WSLGAIMYEMLV 350
WS G ++YE+
Sbjct: 202 WSFGVVLYELFT 213
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 54/252 (21%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE--- 162
D+++++ IG GA+G V + + +G A+KK+ + + +R E +L
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKH 112
Query: 163 ---VASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
+A I++ + + + +Y++++ + D+ R+++ Q + +
Sbjct: 113 DNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQLLRGL 171
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
+ +H IHRD+KP NLL+++N +K+ DFG+ + L CT
Sbjct: 172 KYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGL-CT-------------------- 210
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDW 338
SP E Q++ V T Y APE++L Y D
Sbjct: 211 ----------------SPAEH-QYFMTE-------YVATRWYRAPELMLSLHEYTQAIDL 246
Query: 339 WSLGAIMYEMLV 350
WS+G I EML
Sbjct: 247 WSVGCIFGEMLA 258
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 101/239 (42%), Gaps = 41/239 (17%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKK-SEMLSRGQVEHVRAERNLLAEVASHCIVKL 171
++G+G FG+ +++G + MK+L + E R ++ V+ R L I L
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 172 YYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLA-IESIHKHNYIHR 230
Y + L I EY+ GG + R A+ + + + +H N IHR
Sbjct: 77 YKD----KRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHR 132
Query: 231 DIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGC 290
D+ N L+ +N ++ ++DFGL + + VD
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLAR------------------------LMVDE------- 161
Query: 291 GRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 349
K+ E L+ + RK Y+ VG P ++APE++ + Y + D +S G ++ E++
Sbjct: 162 ----KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 86 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 143
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 183
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKK-GYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 184 ------ATRW--------------------------YRAPEIMLNAMHYNQTVDIWSVGC 211
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 54/252 (21%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE--- 162
D+++++ IG GA+G V + + +G A+KK+ + + +R E +L
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKH 113
Query: 163 ---VASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
+A I++ + + + +Y++++ + D+ R+++ Q + +
Sbjct: 114 DNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQLLRGL 172
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
+ +H IHRD+KP NLL+++N +K+ DFG+ + L CT
Sbjct: 173 KYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGL-CT-------------------- 211
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDW 338
SP E Q++ V T Y APE++L Y D
Sbjct: 212 ----------------SPAEH-QYFMTE-------YVATRWYRAPELMLSLHEYTQAIDL 247
Query: 339 WSLGAIMYEMLV 350
WS+G I EML
Sbjct: 248 WSVGCIFGEMLA 259
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 101/265 (38%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 86 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKXQKLTDDHV-QFLIYQILRGLKYIHS 143
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 183
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 184 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 38 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 96
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 97 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 154
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 155 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV-------------------- 194
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 195 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 222
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 223 IMAELLTGRTLFPGTDHIDQLKLIL 247
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 32 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 90
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 91 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 148
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 149 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV-------------------- 188
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 189 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 216
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 217 IMAELLTGRTLFPGTDHIDQLKLIL 241
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 7/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I + L+ +G G FGEV + S + A+K LK M V+ E NL+
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKV-AVKTLKPGTM----SVQAFLEEANLMK 62
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF--YIAQSVLAI 219
+ +V+LY E +Y+I E++ G + + + + AQ +
Sbjct: 63 TLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGM 122
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
I + NYIHRD++ N+L+ ++ K++DFGL + ++ +A
Sbjct: 123 AYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA 166
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 86 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 143
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXV-------------------- 183
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 184 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 86 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 143
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 183
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 184 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 86 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 143
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 183
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 184 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 86 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 143
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 183
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 184 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 86 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 143
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 183
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 184 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 126/313 (40%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E + P D+ +AR + Q + A+ H
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 134
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 174
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 175 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 204
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + R V ++ R++ E + LI L T
Sbjct: 205 YDMVCGDIPFEHDEEII--RGQVFFRQ--------RVSSECQHLIRWCLALRPSDRPTF- 253
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 254 -EEIQNHPWMQDV 265
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 29 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 87
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 88 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 145
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 185
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 186 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 213
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 214 IMAELLTGRTLFPGTDHIDQLKLIL 238
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 32 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 90
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 91 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 148
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 149 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 188
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 189 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 216
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 217 IMAELLTGRTLFPGTDHIDQLKLIL 241
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 38 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 96
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 97 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 154
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 155 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 194
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 195 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 222
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 223 IMAELLTGRTLFPGTDHIDQLKLIL 247
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 26 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 84
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 85 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 142
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 143 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 182
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 183 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 210
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 211 IMAELLTGRTLFPGTDHIDQLKLIL 235
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 86 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 143
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 183
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 184 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 29 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 87
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 88 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 145
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 185
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 186 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 213
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 214 IMAELLTGRTLFPGTDHIDQLKLIL 238
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 39 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 97
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 98 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 155
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 195
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 196 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 223
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 224 IMAELLTGRTLFPGTDHIDQLKLIL 248
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 39 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 97
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 98 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 155
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 195
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 196 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 223
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 224 IMAELLTGRTLFPGTDHIDQLKLIL 248
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 33 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 91
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 92 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 149
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 189
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 190 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 218 IMAELLTGRTLFPGTDHIDQLKLIL 242
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 29 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 87
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 88 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 145
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 185
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 186 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 213
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 214 IMAELLTGRTLFPGTDHIDQLKLIL 238
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 86 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 143
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 183
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 184 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 50 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 108
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 109 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 166
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 167 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYV-------------------- 206
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 207 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 234
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 235 IMAELLTGRTLFPGTDHIDQLKLIL 259
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 6/179 (3%)
Query: 87 DLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLS 146
DL + + + + ++ D + +G G +GEV + KK A+K LK+ M
Sbjct: 13 DLGTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM-- 70
Query: 147 RGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXX 205
+VE E ++ E+ +V+L Y++ EY+P G++
Sbjct: 71 --EVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVT 128
Query: 206 XVARFYIAQSVL-AIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
V Y+A + A+E + K N+IHRD+ N L+ +N +K++DFGL + + +A
Sbjct: 129 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTA 187
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 50 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 108
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 109 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 166
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 167 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 206
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 207 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 234
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 235 IMAELLTGRTLFPGTDHIDQLKLIL 259
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 92
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 93 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 150
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 190
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 191 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 218
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 219 IMAELLTGRTLFPGTDHIDQLKLIL 243
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 130/329 (39%), Gaps = 81/329 (24%)
Query: 108 FDLLTIIGRGAFGEV-RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH 166
+ +L IG G +V ++ EKK IYA+K + E ++ ++ R E L ++ H
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVNLEEADNQ-TLDSYRNEIAYLNKLQQH 114
Query: 167 C--IVKLY-YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
I++LY Y D +Y+Y++ME D+ + Y + A+ +IH
Sbjct: 115 SDKIIRLYDYEITD-QYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 172
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
+H +H D+KP N L+ +G +KL DFG+ + S +
Sbjct: 173 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD----------------- 214
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-------- 335
S VGT +Y+ PE + E
Sbjct: 215 ------------------------------SQVGTVNYMPPEAIKDMSSSRENGKSKSKI 244
Query: 336 ---CDWWSLGAIMYEMLVGYPPFYS-DDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLIC 391
D WSLG I+Y M G PF + ++ I+ + ++FP+ PE KDL
Sbjct: 245 SPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD----IPE-KDLQD 299
Query: 392 RLLC----DVEHRLGTLGSEQIKAHPWFK 416
L C D + R+ ++ AHP+ +
Sbjct: 300 VLKCCLKRDPKQRISI---PELLAHPYVQ 325
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 32 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 90
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 91 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 148
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 149 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 188
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 189 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 216
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 217 IMAELLTGRTLFPGTDHIDQLKLIL 241
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 33 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 91
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 92 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 149
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 189
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 190 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 218 IMAELLTGRTLFPGTDHIDQLKLIL 242
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 47 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 105
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 106 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 163
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 203
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 204 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 231
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 232 IMAELLTGRTLFPGTDHIDQLKLIL 256
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 46 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 104
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 105 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 162
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 163 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 202
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 203 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 230
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 231 IMAELLTGRTLFPGTDHIDQLKLIL 255
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 99/270 (36%), Gaps = 57/270 (21%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
S+D + +T +G G +GEV + + A+K+++ E G E +LL E+
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRL-EHEEEGVPGTAIREVSLLKEL 90
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
I++L L+LI EY D+ V + ++ Q + + H
Sbjct: 91 QHRNIIELKSVIHHNHRLHLIFEY-AENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCH 149
Query: 224 KHNYIHRDIKPDNLLL-----DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
+HRD+KP NLLL + +K+ DFGL
Sbjct: 150 SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA------------------------- 184
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECD 337
R + P+ Q H I T Y PE+LL + Y D
Sbjct: 185 -------------RAFGIPIRQFTHEII-----------TLWYRPPEILLGSRHYSTSVD 220
Query: 338 WWSLGAIMYEMLVGYPPFYSDDPVTTCRKI 367
WS+ I EML+ P F D + KI
Sbjct: 221 IWSIACIWAEMLMKTPLFPGDSEIDQLFKI 250
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 130/329 (39%), Gaps = 81/329 (24%)
Query: 108 FDLLTIIGRGAFGEV-RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH 166
+ +L IG G +V ++ EKK IYA+K + E ++ ++ R E L ++ H
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQ--IYAIKYVNLEEADNQ-TLDSYRNEIAYLNKLQQH 114
Query: 167 C--IVKLY-YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
I++LY Y D +Y+Y++ME D+ + Y + A+ +IH
Sbjct: 115 SDKIIRLYDYEITD-QYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 172
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
+H +H D+KP N L+ +G +KL DFG+ + S +
Sbjct: 173 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD----------------- 214
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-------- 335
S VGT +Y+ PE + E
Sbjct: 215 ------------------------------SQVGTVNYMPPEAIKDMSSSRENGKSKSKI 244
Query: 336 ---CDWWSLGAIMYEMLVGYPPFYS-DDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLIC 391
D WSLG I+Y M G PF + ++ I+ + ++FP+ PE KDL
Sbjct: 245 SPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD----IPE-KDLQD 299
Query: 392 RLLC----DVEHRLGTLGSEQIKAHPWFK 416
L C D + R+ ++ AHP+ +
Sbjct: 300 VLKCCLKRDPKQRISI---PELLAHPYVQ 325
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 122/328 (37%), Gaps = 90/328 (27%)
Query: 111 LTIIGRGAFGEV----------RLCQEKKSG---NIYAMKKLKKSEMLSRGQVEHVRAER 157
L IG GA+G V R+ +K S Y + L++ ++L R + E+V R
Sbjct: 48 LQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIR 107
Query: 158 NLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL 217
++L + +Y I++ L D+ + +++ Q +
Sbjct: 108 DILRASTLEAMRDVY-----------IVQDLMETDLYKLLKSQQLSNDHIC-YFLYQILR 155
Query: 218 AIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXX 277
++ IH N +HRD+KP NLL++ +K+ DFGL + D +
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEH----------------- 198
Query: 278 SMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMEC 336
D G F RW Y APE++L KGY
Sbjct: 199 --DHTG-FLTEXVATRW--------------------------YRAPEIMLNSKGYTKSI 229
Query: 337 DWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCD 396
D WS+G I+ EML P F H+ + L +P +DL C +
Sbjct: 230 DIWSVGCILAEMLSNRPIFPGK----------HYLDQLNHILGILGSPSQEDLNCIINMK 279
Query: 397 VEHRLGTLGSEQIKAHPWFKDIAWDKLY 424
+ L +L S+ +AW KL+
Sbjct: 280 ARNYLQSLPSK--------TKVAWAKLF 299
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 24 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 82
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 83 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 140
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 141 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 180
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 181 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 208
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 209 IMAELLTGRTLFPGTDHIDQLKLIL 233
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 81
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 82 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 139
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 179
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 180 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 207
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 208 IMAELLTGRTLFPGTDHIDQLKLIL 232
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 135/344 (39%), Gaps = 81/344 (23%)
Query: 93 TEYMRLKRHKISVDDFDLLTIIGRGAFGEV-RLCQEKKSGNIYAMKKLKKSEMLSRGQVE 151
TE + + + + +L IG G +V ++ EKK IYA+K + E ++ ++
Sbjct: 15 TENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQ--IYAIKYVNLEEADNQT-LD 71
Query: 152 HVRAERNLLAEVASHC--IVKLY-YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA 208
R E L ++ H I++LY Y D +Y+Y++ME D+
Sbjct: 72 SYRNEIAYLNKLQQHSDKIIRLYDYEITD-QYIYMVME-CGNIDLNSWLKKKKSIDPWER 129
Query: 209 RFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXX 268
+ Y + A+ +IH+H +H D+KP N L+ +G +KL DFG+ + S +
Sbjct: 130 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD-- 186
Query: 269 XXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL 328
S VGT +Y+ PE +
Sbjct: 187 ---------------------------------------------SQVGTVNYMPPEAIK 201
Query: 329 KKGYGME-----------CDWWSLGAIMYEMLVGYPPFYS-DDPVTTCRKIVHWKNHLKF 376
E D WSLG I+Y M G PF + ++ I+ + ++F
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 261
Query: 377 PEEARLTPEAKDLICRLLC----DVEHRLGTLGSEQIKAHPWFK 416
P+ PE KDL L C D + R+ ++ AHP+ +
Sbjct: 262 PD----IPE-KDLQDVLKCCLKRDPKQRISI---PELLAHPYVQ 297
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 86 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 143
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 183
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 184 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 24 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 82
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 83 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 140
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 141 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 180
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 181 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 208
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 209 IMAELLTGRTLFPGTDHIDQLKLIL 233
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 25 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 83
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 84 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 141
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + D +
Sbjct: 142 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-------------------- 181
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 182 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 209
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 210 IMAELLTGRTLFPGTDHIDQLKLIL 234
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 130/329 (39%), Gaps = 81/329 (24%)
Query: 108 FDLLTIIGRGAFGEV-RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH 166
+ +L IG G +V ++ EKK IYA+K + E ++ ++ R E L ++ H
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQ--IYAIKYVNLEEADNQ-TLDSYRNEIAYLNKLQQH 67
Query: 167 C--IVKLY-YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
I++LY Y D +Y+Y++ME D+ + Y + A+ +IH
Sbjct: 68 SDKIIRLYDYEITD-QYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 125
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
+H +H D+KP N L+ +G +KL DFG+ + S +
Sbjct: 126 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD----------------- 167
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-------- 335
S VGT +Y+ PE + E
Sbjct: 168 ------------------------------SQVGTVNYMPPEAIKDMSSSRENGKSKSKI 197
Query: 336 ---CDWWSLGAIMYEMLVGYPPFYS-DDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLIC 391
D WSLG I+Y M G PF + ++ I+ + ++FP+ PE KDL
Sbjct: 198 SPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD----IPE-KDLQD 252
Query: 392 RLLC----DVEHRLGTLGSEQIKAHPWFK 416
L C D + R+ ++ AHP+ +
Sbjct: 253 VLKCCLKRDPKQRISI---PELLAHPYVQ 278
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 103/268 (38%), Gaps = 55/268 (20%)
Query: 96 MRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRA 155
M L + ++ D + +G G FGEV KK A+K LK+ M +VE
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLK 56
Query: 156 ERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXXXVARFYIAQ 214
E ++ E+ +V+L Y+I E++ G++ V Y+A
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 116
Query: 215 SVL-AIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXX 273
+ A+E + K N+IHRD+ N L+ +N +K++DFGL + + +A
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA---------- 166
Query: 274 XXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYG 333
+FP + APE L +
Sbjct: 167 ------HAGAKFP--------------------------------IKWTAPESLAYNKFS 188
Query: 334 MECDWWSLGAIMYEMLV-GYPPFYSDDP 360
++ D W+ G +++E+ G P+ DP
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPGIDP 216
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 109/294 (37%), Gaps = 71/294 (24%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + G A+KKL +
Sbjct: 8 NQFYSVEVADSTFTVLKRYQ-------QLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRP 60
Query: 143 EMLSRGQVEHVRAERNL-LAEVASH-CIVKLYYSFQDAEYL------YLIMEYLPGGDVX 194
+ Q RA R L L + +H I+ L F + L YL+ME + D
Sbjct: 61 ---FQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM---DAN 114
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 115 LCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 255 PLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYS 314
CTN +
Sbjct: 175 TA-CTNF-------------------------------------------------MMTP 184
Query: 315 TVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIV 368
V T Y APEV+L GY D WS+G IM E++ G F D + K++
Sbjct: 185 YVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVI 238
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 130/329 (39%), Gaps = 81/329 (24%)
Query: 108 FDLLTIIGRGAFGEV-RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH 166
+ +L IG G +V ++ EKK IYA+K + E ++ ++ R E L ++ H
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQ--IYAIKYVNLEEADNQ-TLDSYRNEIAYLNKLQQH 66
Query: 167 C--IVKLY-YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
I++LY Y D +Y+Y++ME D+ + Y + A+ +IH
Sbjct: 67 SDKIIRLYDYEITD-QYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 124
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
+H +H D+KP N L+ +G +KL DFG+ + S +
Sbjct: 125 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD----------------- 166
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-------- 335
S VGT +Y+ PE + E
Sbjct: 167 ------------------------------SQVGTVNYMPPEAIKDMSSSRENGKSKSKI 196
Query: 336 ---CDWWSLGAIMYEMLVGYPPFYS-DDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLIC 391
D WSLG I+Y M G PF + ++ I+ + ++FP+ PE KDL
Sbjct: 197 SPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD----IPE-KDLQD 251
Query: 392 RLLC----DVEHRLGTLGSEQIKAHPWFK 416
L C D + R+ ++ AHP+ +
Sbjct: 252 VLKCCLKRDPKQRISI---PELLAHPYVQ 277
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 110/265 (41%), Gaps = 60/265 (22%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKK--------------LKKSEMLSRGQVE 151
D +++ +IG G++G V +K + A+KK L++ +L+R +
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 152 HVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY 211
HV +V I K F + LY+++E + D +
Sbjct: 113 HV-------VKVLDIVIPKDVEKFDE---LYVVLE-IADSDFKKLFRTPVYLTELHIKTL 161
Query: 212 IAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXX 271
+ ++ ++ +H +HRD+KP N L++Q+ +K+ DFGL + +D
Sbjct: 162 LYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVD-------------- 207
Query: 272 XXXXXXSMDVDGRFPESGCGRRWKSPLEQ------LQHWQINRRKLAYSTVGTPDYIAPE 325
+PE+G + SP E H + +R+L V T Y APE
Sbjct: 208 -------------YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVV-TRWYRAPE 253
Query: 326 -VLLKKGYGMECDWWSLGAIMYEML 349
+LL++ Y D WS+G I E+L
Sbjct: 254 LILLQENYTEAIDVWSIGCIFAELL 278
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 125/313 (39%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 175
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 176 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 205
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + R V ++ R++ E + LI L T
Sbjct: 206 YDMVCGDIPFEHDEEII--RGQVFFRQ--------RVSSECQHLIRWCLALRPSDRPTF- 254
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 255 -EEIQNHPWMQDV 266
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 130/329 (39%), Gaps = 81/329 (24%)
Query: 108 FDLLTIIGRGAFGEV-RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH 166
+ +L IG G +V ++ EKK IYA+K + E ++ ++ R E L ++ H
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQ--IYAIKYVNLEEADNQ-TLDSYRNEIAYLNKLQQH 70
Query: 167 C--IVKLY-YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
I++LY Y D +Y+Y++ME D+ + Y + A+ +IH
Sbjct: 71 SDKIIRLYDYEITD-QYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 128
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
+H +H D+KP N L+ +G +KL DFG+ + S +
Sbjct: 129 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD----------------- 170
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-------- 335
S VGT +Y+ PE + E
Sbjct: 171 ------------------------------SQVGTVNYMPPEAIKDMSSSRENGKSKSKI 200
Query: 336 ---CDWWSLGAIMYEMLVGYPPFYS-DDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLIC 391
D WSLG I+Y M G PF + ++ I+ + ++FP+ PE KDL
Sbjct: 201 SPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD----IPE-KDLQD 255
Query: 392 RLLC----DVEHRLGTLGSEQIKAHPWFK 416
L C D + R+ ++ AHP+ +
Sbjct: 256 VLKCCLKRDPKQRISI---PELLAHPYVQ 281
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 86 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 143
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ D+GL + D +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYV-------------------- 183
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 184 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 125/313 (39%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 175
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 176 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 205
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + R V ++ R++ E + LI L T
Sbjct: 206 YDMVCGDIPFEHDEEII--RGQVFFRQ--------RVSSECQHLIRWCLALRPSDRPTF- 254
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 255 -EEIQNHPWMQDV 266
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 125/313 (39%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNXG 130
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 170
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 171 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 200
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + R V ++ R++ E + LI L T
Sbjct: 201 YDMVCGDIPFEHDEEII--RGQVFFRQ--------RVSXECQHLIRWCLALRPSDRPTF- 249
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 250 -EEIQNHPWMQDV 261
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 103/268 (38%), Gaps = 55/268 (20%)
Query: 96 MRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRA 155
M L + ++ D + +G G +GEV KK A+K LK+ M +VE
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLK 56
Query: 156 ERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXXXVARFYIAQ 214
E ++ E+ +V+L Y+I E++ G++ V Y+A
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 116
Query: 215 SVL-AIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXX 273
+ A+E + K N+IHRD+ N L+ +N +K++DFGL + + +A
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTA---------- 166
Query: 274 XXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYG 333
+FP + APE L +
Sbjct: 167 ------HAGAKFP--------------------------------IKWTAPESLAYNKFS 188
Query: 334 MECDWWSLGAIMYEMLV-GYPPFYSDDP 360
++ D W+ G +++E+ G P+ DP
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPGIDP 216
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 125/313 (39%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 175
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 176 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 205
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + R V ++ R++ E + LI L T
Sbjct: 206 YDMVCGDIPFEHDEEII--RGQVFFRQ--------RVSSECQHLIRWCLALRPSDRPTF- 254
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 255 -EEIQNHPWMQDV 266
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 125/313 (39%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 190
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 191 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 220
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + R V ++ R++ E + LI L T
Sbjct: 221 YDMVCGDIPFEHDEEII--RGQVFFRQ--------RVSSECQHLIRWCLALRPSDRPTF- 269
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 270 -EEIQNHPWMQDV 281
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 126/339 (37%), Gaps = 88/339 (25%)
Query: 114 IGRGAFGEVRLCQE-KKSGNIYAMKKLK---KSEMLSRGQVEHVRAERNLLAEVASH-CI 168
IG GA+G+V ++ K G A+K+++ E + + V R+L E H +
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL--ETFEHPNV 76
Query: 169 VKLY----YSFQDAEY-LYLIMEYLPGG-DVXXXXXXXXXXXXXVARFYIAQSVLAIESI 222
V+L+ S D E L L+ E++ + + Q + ++ +
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
H H +HRD+KP N+L+ +G +KL+DFG
Sbjct: 137 HSHRVVHRDLKPQNILVTSSGQIKLADFG------------------------------- 165
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 342
L ++ +Q+ S V T Y APEVLL+ Y D WS+G
Sbjct: 166 ---------------LARIYSFQMA----LTSVVVTLWYRAPEVLLQSSYATPVDLWSVG 206
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIV---------HWKNHLKFPEEARLTPEA------- 386
I EM P F V KI+ W + P +A + A
Sbjct: 207 CIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFV 266
Query: 387 -------KDLICRLLCDVEHRLGTLGSEQIKAHPWFKDI 418
KDL+ L C + + + +HP+F+D+
Sbjct: 267 TDIDELGKDLL--LKCLTFNPAKRISAYSALSHPYFQDL 303
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 125/313 (39%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 134
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 174
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 175 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 204
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + R V ++ R++ E + LI L T
Sbjct: 205 YDMVCGDIPFEHDEEII--RGQVFFRQ--------RVSSECQHLIRWCLALRPSDRPTF- 253
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 254 -EEIQNHPWMQDV 265
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 125/313 (39%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 98 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 157
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 197
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 198 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 227
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + R V ++ R++ E + LI L T
Sbjct: 228 YDMVCGDIPFEHDEEII--RGQVFFRQ--------RVSXECQHLIRWCLALRPSDRPTF- 276
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 277 -EEIQNHPWMQDV 288
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 125/313 (39%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 149
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 189
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 190 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 219
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + R V ++ R++ E + LI L T
Sbjct: 220 YDMVCGDIPFEHDEEII--RGQVFFRQ--------RVSSECQHLIRWCLALRPSDRPTF- 268
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 269 -EEIQNHPWMQDV 280
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 125/313 (39%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 217
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 218 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 247
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + R V ++ R++ E + LI L T
Sbjct: 248 YDMVCGDIPFEHDEEII--RGQVFFRQ--------RVSSECQHLIRWCLALRPSDRPTF- 296
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 297 -EEIQNHPWMQDV 308
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 125/313 (39%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 133
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 173
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 174 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 203
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + R V ++ R++ E + LI L T
Sbjct: 204 YDMVCGDIPFEHDEEII--RGQVFFRQ--------RVSSECQHLIRWCLALRPSDRPTF- 252
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 253 -EEIQNHPWMQDV 264
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 126/339 (37%), Gaps = 88/339 (25%)
Query: 114 IGRGAFGEVRLCQE-KKSGNIYAMKKLK---KSEMLSRGQVEHVRAERNLLAEVASH-CI 168
IG GA+G+V ++ K G A+K+++ E + + V R+L E H +
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL--ETFEHPNV 76
Query: 169 VKLY----YSFQDAEY-LYLIMEYLPGG-DVXXXXXXXXXXXXXVARFYIAQSVLAIESI 222
V+L+ S D E L L+ E++ + + Q + ++ +
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
H H +HRD+KP N+L+ +G +KL+DFG
Sbjct: 137 HSHRVVHRDLKPQNILVTSSGQIKLADFG------------------------------- 165
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 342
L ++ +Q+ S V T Y APEVLL+ Y D WS+G
Sbjct: 166 ---------------LARIYSFQMA----LTSVVVTLWYRAPEVLLQSSYATPVDLWSVG 206
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIV---------HWKNHLKFPEEARLTPEA------- 386
I EM P F V KI+ W + P +A + A
Sbjct: 207 CIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFV 266
Query: 387 -------KDLICRLLCDVEHRLGTLGSEQIKAHPWFKDI 418
KDL+ L C + + + +HP+F+D+
Sbjct: 267 TDIDELGKDLL--LKCLTFNPAKRISAYSALSHPYFQDL 303
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 125/313 (39%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 169
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 209
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 210 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 239
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + R V ++ R++ E + LI L T
Sbjct: 240 YDMVCGDIPFEHDEEII--RGQVFFRQ--------RVSSECQHLIRWCLALRPSDRPTF- 288
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 289 -EEIQNHPWMQDV 300
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 125/313 (39%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 170
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 171 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 200
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + R V ++ R++ E + LI L T
Sbjct: 201 YDMVCGDIPFEHDEEII--RGQVFFRQ--------RVSSECQHLIRWCLALRPSDRPTF- 249
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 250 -EEIQNHPWMQDV 261
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 129/329 (39%), Gaps = 81/329 (24%)
Query: 108 FDLLTIIGRGAFGEV-RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH 166
+ +L IG G +V ++ EKK IYA+K + E ++ ++ R E L ++ H
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVNLEEADNQ-TLDSYRNEIAYLNKLQQH 114
Query: 167 C--IVKLY-YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
I++LY Y D +Y+Y++ME D+ + Y + A+ +IH
Sbjct: 115 SDKIIRLYDYEITD-QYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 172
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
+H +H D+KP N L+ +G +KL DFG+ + S +
Sbjct: 173 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD----------------- 214
Query: 284 RFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME-------- 335
S VG +Y+ PE + E
Sbjct: 215 ------------------------------SQVGAVNYMPPEAIKDMSSSRENGKSKSKI 244
Query: 336 ---CDWWSLGAIMYEMLVGYPPFYS-DDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLIC 391
D WSLG I+Y M G PF + ++ I+ + ++FP+ PE KDL
Sbjct: 245 SPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD----IPE-KDLQD 299
Query: 392 RLLC----DVEHRLGTLGSEQIKAHPWFK 416
L C D + R+ ++ AHP+ +
Sbjct: 300 VLKCCLKRDPKQRISI---PELLAHPYVQ 325
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 125/313 (39%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 202
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 203 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 232
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + R V ++ R++ E + LI L T
Sbjct: 233 YDMVCGDIPFEHDEEII--RGQVFFRQ--------RVSSECQHLIRWCLALRPSDRPTF- 281
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 282 -EEIQNHPWMQDV 293
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 125/313 (39%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 149
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 189
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 190 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 219
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + R V ++ R++ E + LI L T
Sbjct: 220 YDMVCGDIPFEHDEEII--RGQVFFRQ--------RVSXECQHLIRWCLALRPSDRPTF- 268
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 269 -EEIQNHPWMQDV 280
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 125/313 (39%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 190
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 191 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 220
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + R V ++ R++ E + LI L T
Sbjct: 221 YDMVCGDIPFEHDEEII--RGQVFFRQ--------RVSXECQHLIRWCLALRPSDRPTF- 269
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 270 -EEIQNHPWMQDV 281
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G+ A+KKL + S + E LL + ++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 86 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 143
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DF L + D +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYV-------------------- 183
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 184 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 125/313 (39%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 190
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 191 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 220
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + R V ++ R++ E + LI L T
Sbjct: 221 YDMVCGDIPFEHDEEII--RGQVFFRQ--------RVSXECQHLIRWCLALRPXDRPTF- 269
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 270 -EEIQNHPWMQDV 281
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 125/313 (39%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 217
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 218 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 247
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + R V ++ R++ E + LI L T
Sbjct: 248 YDMVCGDIPFEHDEEII--RGQVFFRQ--------RVSXECQHLIRWCLALRPSDRPTF- 296
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 297 -EEIQNHPWMQDV 308
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 125/328 (38%), Gaps = 90/328 (27%)
Query: 111 LTIIGRGAFG----------EVRLCQEKKSG---NIYAMKKLKKSEMLSRGQVEHVRAER 157
L+ IG GA+G +VR+ +K S Y + L++ ++L R + E++
Sbjct: 48 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 107
Query: 158 NLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL 217
+++ + + + +YL+ +L G D+ + +++ Q +
Sbjct: 108 DIIRAP----------TIEQMKDVYLV-THLMGADLYKLLKTQHLSNDHIC-YFLYQILR 155
Query: 218 AIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXX 277
++ IH N +HRD+KP NLLL+ +K+ DFGL + D +
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH----------------- 198
Query: 278 SMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMEC 336
D G E RW Y APE++L KGY
Sbjct: 199 --DHTGFLTEY-VATRW--------------------------YRAPEIMLNSKGYTKSI 229
Query: 337 DWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCD 396
D WS+G I+ EML P F H+ + L +P +DL C +
Sbjct: 230 DIWSVGCILAEMLSNRPIFPGK----------HYLDQLNHILGILGSPSQEDLNCIINLK 279
Query: 397 VEHRLGTLGSEQIKAHPWFKDIAWDKLY 424
+ L +L P + W++L+
Sbjct: 280 ARNYLLSL--------PHKNKVPWNRLF 299
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 125/313 (39%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 182
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 222
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 223 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 252
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + R V ++ R++ E + LI L T
Sbjct: 253 YDMVCGDIPFEHDEEII--RGQVFFRQ--------RVSXECQHLIRWCLALRPSDRPTF- 301
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 302 -EEIQNHPWMQDV 313
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 122/313 (38%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 170
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 171 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 200
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + + R++ E + LI L T
Sbjct: 201 YDMVCGDIPFEHDEEIIGGQVFF----------RQRVSSECQHLIRWCLALRPSDRPTF- 249
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 250 -EEIQNHPWMQDV 261
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 122/313 (38%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 202
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 203 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 232
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + + R++ E + LI L T
Sbjct: 233 YDMVCGDIPFEHDEEIIGGQVFF----------RQRVSSECQHLIRWCLALRPSDRPTF- 281
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 282 -EEIQNHPWMQDV 293
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 122/313 (38%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 203
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 204 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 233
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + + R++ E + LI L T
Sbjct: 234 YDMVCGDIPFEHDEEIIGGQVFF----------RQRVSSECQHLIRWCLALRPSDRPTF- 282
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 283 -EEIQNHPWMQDV 294
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
++ + L+ +G G FGEV + + A+K LK+ M + AE NL+
Sbjct: 17 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMK 71
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
++ +V+LY + E +Y+I EY+ G + + + AQ +
Sbjct: 72 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 130
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
I + NYIHRD++ N+L+ K++DFGL + ++ +A
Sbjct: 131 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA 174
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 122/313 (38%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 203
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 204 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 233
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + + R++ E + LI L T
Sbjct: 234 YDMVCGDIPFEHDEEIIGGQVFF----------RQRVSSECQHLIRWCLALRPSDRPTF- 282
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 283 -EEIQNHPWMQDV 294
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
++ + L+ +G G FGEV + + A+K LK+ M + AE NL+
Sbjct: 18 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMK 72
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
++ +V+LY + E +Y+I EY+ G + + + AQ +
Sbjct: 73 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 131
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
I + NYIHRD++ N+L+ K++DFGL + ++ +A
Sbjct: 132 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA 175
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
++ + L+ +G G FGEV + + A+K LK+ M + AE NL+
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMK 63
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
++ +V+LY + E +Y+I EY+ G + + + AQ +
Sbjct: 64 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
I + NYIHRD++ N+L+ K++DFGL + ++ +A
Sbjct: 123 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA 166
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
++ + L+ +G G FGEV + + A+K LK+ M + AE NL+
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMK 69
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
++ +V+LY + E +Y+I EY+ G + + + AQ +
Sbjct: 70 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 128
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
I + NYIHRD++ N+L+ K++DFGL + ++ +A
Sbjct: 129 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA 172
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 122/313 (38%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 202
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 203 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 232
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + + R++ E + LI L T
Sbjct: 233 YDMVCGDIPFEHDEEIIGGQVFF----------RQRVSSECQHLIRWCLALRPSDRPTF- 281
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 282 -EEIQNHPWMQDV 293
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
++ + L+ +G G FGEV + + A+K LK+ M + AE NL+
Sbjct: 19 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMK 73
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
++ +V+LY + E +Y+I EY+ G + + + AQ +
Sbjct: 74 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 132
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
I + NYIHRD++ N+L+ K++DFGL + ++ +A
Sbjct: 133 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 176
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 122/313 (38%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 203
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 204 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 233
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + + R++ E + LI L T
Sbjct: 234 YDMVCGDIPFEHDEEIIGGQVFF----------RQRVSXECQHLIRWCLALRPSDRPTF- 282
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 283 -EEIQNHPWMQDV 294
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
++ + L+ +G G FGEV + + A+K LK+ M + AE NL+
Sbjct: 14 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMK 68
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
++ +V+LY + E +Y+I EY+ G + + + AQ +
Sbjct: 69 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 127
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
I + NYIHRD++ N+L+ K++DFGL + ++ +A
Sbjct: 128 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 171
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 99/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 86 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 143
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ FGL + D +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYV-------------------- 183
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 184 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS--------------EMLSRGQV 150
++D+ ++ + +G F ++ LC+ K YA+KK +KS ++ + +
Sbjct: 30 INDYRIIRTLNQGKFNKIILCE--KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKY 87
Query: 151 EHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF 210
+ + E ++ ++ + + + + +Y+I EY+ + F
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 211 Y-------IAQSVL-AIESIHKH-NYIHRDIKPDNLLLDQNGHMKLSDFG 251
I +SVL + IH N HRD+KP N+L+D+NG +KLSDFG
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFG 197
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G G FGEV + K + A+K +K M VE AE N++ + +VKL+
Sbjct: 23 LGAGQFGEVWMATYNKHTKV-AVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLH- 76
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF--YIAQSVLAIESIHKHNYIHRD 231
+ E +Y+I E++ G + + + + AQ + I + NYIHRD
Sbjct: 77 AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD 136
Query: 232 IKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
++ N+L+ + K++DFGL + ++ +A
Sbjct: 137 LRAANILVSASLVCKIADFGLARVIEDNEYTA 168
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
++ + L+ +G G FGEV + + A+K LK+ M + AE NL+
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMK 69
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
++ +V+LY + E +Y+I EY+ G + + + AQ +
Sbjct: 70 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 128
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
I + NYIHRD++ N+L+ K++DFGL + ++ +A
Sbjct: 129 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 172
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 122/313 (38%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 202
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 203 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 232
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + + R++ E + LI L T
Sbjct: 233 YDMVCGDIPFEHDEEIIGGQVFF----------RQRVSXECQHLIRWCLALRPSDRPTF- 281
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 282 -EEIQNHPWMQDV 293
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 122/313 (38%), Gaps = 69/313 (22%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HC 167
++G G FG V A+K ++K + G++ + V E LL +V+S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 168 IVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN 226
+++L F+ + LI+E P D+ +AR + Q + A+ H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 227 YIHRDIKPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRF 285
+HRDIK +N+L+D N G +KL DFG L T + D D
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-----------------DFD--- 203
Query: 286 PESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 345
G R SP E +++ + + R A WSLG ++
Sbjct: 204 -----GTRVYSPPEWIRYHRYHGRSAAV-------------------------WSLGILL 233
Query: 346 YEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG 405
Y+M+ G PF D+ + + R++ E + LI L T
Sbjct: 234 YDMVCGDIPFEHDEEIIGGQVFF----------RQRVSXECQHLIRWCLALRPSDRPTF- 282
Query: 406 SEQIKAHPWFKDI 418
E+I+ HPW +D+
Sbjct: 283 -EEIQNHPWMQDV 294
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
++ + L+ +G G FGEV + + A+K LK+ M + AE NL+
Sbjct: 11 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMK 65
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
++ +V+LY + E +Y+I EY+ G + + + AQ +
Sbjct: 66 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 124
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
I + NYIHRD++ N+L+ K++DFGL + ++ +A
Sbjct: 125 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA 168
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
++ + L+ +G G FGEV + + A+K LK+ M + AE NL+
Sbjct: 10 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMK 64
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
++ +V+LY + E +Y+I EY+ G + + + AQ +
Sbjct: 65 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 123
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
I + NYIHRD++ N+L+ K++DFGL + ++ +A
Sbjct: 124 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA 167
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 134/344 (38%), Gaps = 81/344 (23%)
Query: 93 TEYMRLKRHKISVDDFDLLTIIGRGAFGEV-RLCQEKKSGNIYAMKKLKKSEMLSRGQVE 151
TE + + + + +L IG G +V ++ EKK IYA+K + E ++ ++
Sbjct: 15 TENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQ--IYAIKYVNLEEADNQ-TLD 71
Query: 152 HVRAERNLLAEVASHC--IVKLY-YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA 208
R E L ++ H I++LY Y D +Y+Y++ME D+
Sbjct: 72 SYRNEIAYLNKLQQHSDKIIRLYDYEITD-QYIYMVME-CGNIDLNSWLKKKKSIDPWER 129
Query: 209 RFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXX 268
+ Y + A+ +IH+H +H D+KP N L+ +G +KL DFG+ + +
Sbjct: 130 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKD-- 186
Query: 269 XXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL 328
S VGT +Y+ PE +
Sbjct: 187 ---------------------------------------------SQVGTVNYMPPEAIK 201
Query: 329 KKGYGME-----------CDWWSLGAIMYEMLVGYPPFYS-DDPVTTCRKIVHWKNHLKF 376
E D WSLG I+Y M G PF + ++ I+ + ++F
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 261
Query: 377 PEEARLTPEAKDLICRLLC----DVEHRLGTLGSEQIKAHPWFK 416
P+ PE KDL L C D + R+ ++ AHP+ +
Sbjct: 262 PD----IPE-KDLQDVLKCCLKRDPKQRISI---PELLAHPYVQ 297
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
++ + L+ +G G FGEV + + A+K LK+ M + AE NL+
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMK 63
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
++ +V+LY + E +Y+I EY+ G + + + AQ +
Sbjct: 64 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
I + NYIHRD++ N+L+ K++DFGL + ++ +A
Sbjct: 123 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA 166
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
++ + L+ +G G FGEV + + A+K LK+ M + AE NL+
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMK 63
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
++ +V+LY + E +Y+I EY+ G + + + AQ +
Sbjct: 64 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
I + NYIHRD++ N+L+ K++DFGL + ++ +A
Sbjct: 123 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 166
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G G FGEV + K + A+K +K M VE AE N++ + +VKL+
Sbjct: 196 LGAGQFGEVWMATYNKHTKV-AVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLH- 249
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF--YIAQSVLAIESIHKHNYIHRD 231
+ E +Y+I E++ G + + + + AQ + I + NYIHRD
Sbjct: 250 AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD 309
Query: 232 IKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
++ N+L+ + K++DFGL + ++ +A
Sbjct: 310 LRAANILVSASLVCKIADFGLARVIEDNEYTA 341
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 126/343 (36%), Gaps = 98/343 (28%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRG-QVEHVRAERNLLAEVASHCIVKL 171
+IG G+FG V + +S + K L+ +R Q+ + N++ A
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKA------F 100
Query: 172 YYSFQDAE---YLYLIMEYLPGGDVXXX---XXXXXXXXXXVARFYIAQSVLAIESIHKH 225
+YS D + +L L++EY+P + + Y+ Q + ++ IH
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI 160
Query: 226 NYIHRDIKPDNLLLD-QNGHMKLSDFGLCKPLDC--TNLSAIXXXXXXXXXXXXXSMDVD 282
HRDIKP NLLLD +G +KL DFG K L N+S I
Sbjct: 161 GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXI------------------ 202
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSL 341
C R ++ APE++ Y D WS
Sbjct: 203 -------CSRYYR---------------------------APELIFGATNYTTNIDIWST 228
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKIV----------------HWKNHLKFPE------- 378
G +M E++ G P F + + +I+ ++ H KFP+
Sbjct: 229 GCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEH-KFPQIRPHPFS 287
Query: 379 ---EARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDI 418
R P+A DLI RLL L + + HP+F ++
Sbjct: 288 KVFRPRTPPDAIDLISRLLEYTPS--ARLTAIEALCHPFFDEL 328
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 4/146 (2%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
F L IG G+FG V ++ ++ + A+KK+ S S + + + E L ++
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGG--DVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
++ + +L+MEY G D+ A + A LA +H H
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAY--LHSH 173
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFG 251
N IHRD+K N+LL + G +KL DFG
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFG 199
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 4/146 (2%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHC 167
F L IG G+FG V ++ ++ + A+KK+ S S + + + E L ++
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGG--DVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKH 225
++ + +L+MEY G D+ A + A LA +H H
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAY--LHSH 134
Query: 226 NYIHRDIKPDNLLLDQNGHMKLSDFG 251
N IHRD+K N+LL + G +KL DFG
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFG 160
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 99/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 86 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 143
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ D GL + D +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYV-------------------- 183
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 184 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G G FGEV + K + A+K +K M VE AE N++ + +VKL+
Sbjct: 190 LGAGQFGEVWMATYNKHTKV-AVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLH- 243
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF--YIAQSVLAIESIHKHNYIHRD 231
+ E +Y+I E++ G + + + + AQ + I + NYIHRD
Sbjct: 244 AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD 303
Query: 232 IKPDNLLLDQNGHMKLSDFGLCK-----PLDCTNLSAI 264
++ N+L+ + K++DFGL + P+ T AI
Sbjct: 304 LRAANILVSASLVCKIADFGLARVGAKFPIKWTAPEAI 341
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 82/216 (37%), Gaps = 65/216 (30%)
Query: 210 FYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXX 269
+++ Q + ++ IH N +HRD+KP NLLL+ +K+ DFGL + D +
Sbjct: 126 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH--------- 176
Query: 270 XXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK 329
D G E RW Y APE++L
Sbjct: 177 ----------DHTGFLTEY-VATRW--------------------------YRAPEIMLN 199
Query: 330 -KGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKD 388
KGY D WS+G I+ EML P F H+ + L +PE +D
Sbjct: 200 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK----------HYLDQLNHILGILGSPEQED 249
Query: 389 LICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLY 424
L C + + L +L P + W++L+
Sbjct: 250 LNCIINLKARNYLLSL--------PHKNKVPWNRLF 277
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
++ + L+ +G G FGEV + + A+K LK+ M + AE NL+
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMK 58
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
++ +V+LY + E +Y+I EY+ G + + + AQ +
Sbjct: 59 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 117
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
I + NYIHRD++ N+L+ K++DFGL + ++ +A
Sbjct: 118 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 161
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 99/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 86 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 143
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ D GL + D +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYV-------------------- 183
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 184 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 107/287 (37%), Gaps = 72/287 (25%)
Query: 114 IGRGAFGEVRLCQE-KKSGNIYAMKKLK---KSEMLSRGQVEHVRAERNLLAEVASH-CI 168
IG GA+G+V ++ K G A+K+++ E + + V R+L E H +
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL--ETFEHPNV 76
Query: 169 VKLY----YSFQDAEY-LYLIMEYLPGG-DVXXXXXXXXXXXXXVARFYIAQSVLAIESI 222
V+L+ S D E L L+ E++ + + Q + ++ +
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
H H +HRD+KP N+L+ +G +KL+DFG
Sbjct: 137 HSHRVVHRDLKPQNILVTSSGQIKLADFG------------------------------- 165
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 342
L ++ +Q+ S V T Y APEVLL+ Y D WS+G
Sbjct: 166 ---------------LARIYSFQMA----LTSVVVTLWYRAPEVLLQSSYATPVDLWSVG 206
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIV---------HWKNHLKFPEEA 380
I EM P F V KI+ W + P +A
Sbjct: 207 CIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA 253
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 111 LTIIGRGAFGEVRLCQEKKSG-NIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIV 169
++ +G+G FG V LC+ G N A+ +K+ + Q + E +L + S IV
Sbjct: 12 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIV 71
Query: 170 K---LYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF--YIAQSVLAIESIHK 224
K + Y E L L+MEYLP G +R Y +Q +E +
Sbjct: 72 KYRGVSYGPGRPE-LRLVMEYLPSG-CLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 129
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCK--PLD 257
+HRD+ N+L++ H+K++DFGL K PLD
Sbjct: 130 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 164
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 99/265 (37%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 86 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 143
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ D GL + D +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYV-------------------- 183
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 184 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + + I+
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 81/216 (37%), Gaps = 65/216 (30%)
Query: 210 FYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXX 269
+++ Q + ++ IH N +HRD+KP NLLL+ +K+ DFGL + D +
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDH--------- 180
Query: 270 XXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK 329
D G E RW Y APE++L
Sbjct: 181 ----------DHTGFLTEY-VATRW--------------------------YRAPEIMLN 203
Query: 330 -KGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKD 388
KGY D WS+G I+ EML P F H+ + L +P +D
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK----------HYLDQLNHILGILGSPSQED 253
Query: 389 LICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLY 424
L C + + L +L P + W++L+
Sbjct: 254 LNCGINLKARNYLLSL--------PHKNKVPWNRLF 281
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 104/266 (39%), Gaps = 55/266 (20%)
Query: 98 LKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAER 157
L + ++ D + +G G +GEV KK A+K LK+ M +VE E
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEA 58
Query: 158 NLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXXXVARFYIAQSV 216
++ E+ +V+L Y+I+E++ G++ V Y+A +
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 217 L-AIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
A+E + K N+IHRD+ N L+ +N +K++DFGL + + +A
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA------------ 166
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
+FP +W APE L + ++
Sbjct: 167 ----HAGAKFP-----IKW---------------------------TAPESLAYNKFSIK 190
Query: 336 CDWWSLGAIMYEMLV-GYPPFYSDDP 360
D W+ G +++E+ G P+ DP
Sbjct: 191 SDVWAFGVLLWEIATYGMSPYPGIDP 216
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 111 LTIIGRGAFGEVRLCQEKKSG-NIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIV 169
++ +G+G FG V LC+ G N A+ +K+ + Q + E +L + S IV
Sbjct: 15 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIV 74
Query: 170 KLYYSFQDAEY------LYLIMEYLPGGDVXXXXXXXXXXXXXVARF--YIAQSVLAIES 221
K ++ Y L L+MEYLP G +R Y +Q +E
Sbjct: 75 K----YRGVSYGPGRQSLRLVMEYLPSG-CLRDFLQRHRARLDASRLLLYSSQICKGMEY 129
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK--PLD 257
+ +HRD+ N+L++ H+K++DFGL K PLD
Sbjct: 130 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 167
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 111 LTIIGRGAFGEVRLCQEKKSG-NIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIV 169
++ +G+G FG V LC+ G N A+ +K+ + Q + E +L + S IV
Sbjct: 16 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIV 75
Query: 170 KLYYSFQDAEY------LYLIMEYLPGGDVXXXXXXXXXXXXXVARF--YIAQSVLAIES 221
K ++ Y L L+MEYLP G +R Y +Q +E
Sbjct: 76 K----YRGVSYGPGRQSLRLVMEYLPSG-CLRDFLQRHRARLDASRLLLYSSQICKGMEY 130
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK--PLD 257
+ +HRD+ N+L++ H+K++DFGL K PLD
Sbjct: 131 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 168
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 111 LTIIGRGAFGEVRLCQEKKSG-NIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIV 169
++ +G+G FG V LC+ G N A+ +K+ + Q + E +L + S IV
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIV 87
Query: 170 KLYYSFQDAEY------LYLIMEYLPGGDVXXXXXXXXXXXXXVARF--YIAQSVLAIES 221
K ++ Y L L+MEYLP G +R Y +Q +E
Sbjct: 88 K----YRGVSYGPGRQSLRLVMEYLPSG-CLRDFLQRHRARLDASRLLLYSSQICKGMEY 142
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK--PLD 257
+ +HRD+ N+L++ H+K++DFGL K PLD
Sbjct: 143 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 180
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 59/147 (40%), Gaps = 47/147 (31%)
Query: 210 FYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXX 269
+++ Q + ++ IH N +HRD+KP NLLL+ +K+ DFGL + D +
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDH--------- 178
Query: 270 XXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK 329
D G F RW Y APE++L
Sbjct: 179 ----------DHTG-FLTEYVATRW--------------------------YRAPEIMLN 201
Query: 330 -KGYGMECDWWSLGAIMYEMLVGYPPF 355
KGY D WS+G I+ EML P F
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 99/262 (37%), Gaps = 68/262 (25%)
Query: 101 HKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLL 160
H I + ++ ++GRGAFG V C+ K A+K+++ S + + E L
Sbjct: 4 HMIDYKEIEVEEVVGRGAFGVV--CKAKWRAKDVAIKQIE-----SESERKAFIVELRQL 56
Query: 161 AEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR------FYIAQ 214
+ V IVKLY + + + L+MEY GG + A +Q
Sbjct: 57 SRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQ 114
Query: 215 SVLAIESIHKHNYIHRDIKPDNLLLDQNGH-MKLSDFGLCKPLDCTNLSAIXXXXXXXXX 273
V + S+ IHRD+KP NLLL G +K+ DFG
Sbjct: 115 GVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG---------------------- 152
Query: 274 XXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYG 333
+ D+ H N+ A+ +APEV Y
Sbjct: 153 ---TACDIQ-------------------THMTNNKGSAAW--------MAPEVFEGSNYS 182
Query: 334 MECDWWSLGAIMYEMLVGYPPF 355
+CD +S G I++E++ PF
Sbjct: 183 EKCDVFSWGIILWEVITRRKPF 204
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 59/147 (40%), Gaps = 47/147 (31%)
Query: 210 FYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXX 269
+++ Q + ++ IH N +HRD+KP NLLL+ +K+ DFGL + D +
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH--------- 178
Query: 270 XXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK 329
D G F RW Y APE++L
Sbjct: 179 ----------DHTG-FLTEYVATRW--------------------------YRAPEIMLN 201
Query: 330 -KGYGMECDWWSLGAIMYEMLVGYPPF 355
KGY D WS+G I+ EML P F
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 81/216 (37%), Gaps = 65/216 (30%)
Query: 210 FYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXX 269
+++ Q + ++ IH N +HRD+KP NLLL+ +K+ DFGL + D +
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH--------- 182
Query: 270 XXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK 329
D G F RW Y APE++L
Sbjct: 183 ----------DHTG-FLTEYVATRW--------------------------YRAPEIMLN 205
Query: 330 -KGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKD 388
KGY D WS+G I+ EML P F H+ + L +P +D
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK----------HYLDQLNHILGILGSPSQED 255
Query: 389 LICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLY 424
L C + + L +L P + W++L+
Sbjct: 256 LNCIINLKARNYLLSL--------PHKNKVPWNRLF 283
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 99/264 (37%), Gaps = 60/264 (22%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 92
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 93 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 150
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + + ++ G
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTADEMTGY 189
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
RW E + +W Y D WS+G I
Sbjct: 190 -----VATRWYRAPEIMLNWM-------------------------HYNQTVDIWSVGCI 219
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIV 368
M E+L G F D + + I+
Sbjct: 220 MAELLTGRTLFPGTDHIDQLKLIL 243
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 116/291 (39%), Gaps = 81/291 (27%)
Query: 86 KDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEML 145
+DL+ K + + ++ DD + + +GRGA+G V + SG I A+K+++ + +
Sbjct: 31 RDLDSKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRAT-VN 89
Query: 146 SRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXX 205
S+ Q + + V V Y + +++ ME +
Sbjct: 90 SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM---------------DT 134
Query: 206 XVARFY-----------------IAQSVL-AIESIH-KHNYIHRDIKPDNLLLDQNGHMK 246
+ +FY IA S++ A+E +H K + IHRD+KP N+L++ G +K
Sbjct: 135 SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVK 194
Query: 247 LSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQI 306
+ DFG+ L +D + ++GC
Sbjct: 195 MCDFGISGYL----------------------VDSVAKTIDAGC---------------- 216
Query: 307 NRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYS 357
P+ I PE L +KGY ++ D WSLG M E+ + P+ S
Sbjct: 217 -------KPYMAPERINPE-LNQKGYSVKSDIWSLGITMIELAILRFPYDS 259
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 99/264 (37%), Gaps = 60/264 (22%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 92
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 93 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 150
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + + ++ G
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTADEMTGY 189
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
RW E + +W Y D WS+G I
Sbjct: 190 -----VATRWYRAPEIMLNWM-------------------------HYNQTVDIWSVGCI 219
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIV 368
M E+L G F D + + I+
Sbjct: 220 MAELLTGRTLFPGTDHIDQLKLIL 243
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 81/216 (37%), Gaps = 65/216 (30%)
Query: 210 FYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXX 269
+++ Q + ++ IH N +HRD+KP NLLL+ +K+ DFGL + D +
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH--------- 182
Query: 270 XXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK 329
D G F RW Y APE++L
Sbjct: 183 ----------DHTG-FLXEXVATRW--------------------------YRAPEIMLN 205
Query: 330 -KGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKD 388
KGY D WS+G I+ EML P F H+ + L +P +D
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK----------HYLDQLNHILGILGSPSQED 255
Query: 389 LICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLY 424
L C + + L +L P + W++L+
Sbjct: 256 LNCIINLKARNYLLSL--------PHKNKVPWNRLF 283
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 81/216 (37%), Gaps = 65/216 (30%)
Query: 210 FYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXX 269
+++ Q + ++ IH N +HRD+KP NLLL+ +K+ DFGL + D +
Sbjct: 133 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH--------- 183
Query: 270 XXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK 329
D G F RW Y APE++L
Sbjct: 184 ----------DHTG-FLXEXVATRW--------------------------YRAPEIMLN 206
Query: 330 -KGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKD 388
KGY D WS+G I+ EML P F H+ + L +P +D
Sbjct: 207 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK----------HYLDQLNHILGILGSPSQED 256
Query: 389 LICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLY 424
L C + + L +L P + W++L+
Sbjct: 257 LNCIINLKARNYLLSL--------PHKNKVPWNRLF 284
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 93/251 (37%), Gaps = 31/251 (12%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH-CIVKLY 172
IG G F V L + + +K+ ++ + AE L ++ +
Sbjct: 29 IGEGTFSSVYLATAQL--QVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVK 86
Query: 173 YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDI 232
Y F+ +++ + M YL R Y+ A++ IH+ +HRD+
Sbjct: 87 YCFRKNDHVVIAMPYLEHESFLDILNSLSFQE---VREYMLNLFKALKRIHQFGIVHRDV 143
Query: 233 KPDNLLLDQN-GHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCG 291
KP N L ++ L DFGL + T + + V + C
Sbjct: 144 KPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKF--------------VQSEAQQERCS 189
Query: 292 RRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEMLV 350
+ S ++RR+ GTP + APEVL K D WS G I +L
Sbjct: 190 QNKCSIC-------LSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLS 242
Query: 351 GYPPFY--SDD 359
G PFY SDD
Sbjct: 243 GRYPFYKASDD 253
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 99/264 (37%), Gaps = 60/264 (22%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L+ +G GA+G V + K+G A+KKL + S + E LL + ++
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIG 92
Query: 171 LYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L F A L YL+ +L G D+ V +F I Q + ++ IH
Sbjct: 93 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHS 150
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
+ IHRD+KP NL ++++ +K+ DFGL + + ++ G
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTADEMTGY 189
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
RW E + +W Y D WS+G I
Sbjct: 190 -----VATRWYRAPEIMLNWM-------------------------HYNQTVDIWSVGCI 219
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIV 368
M E+L G F D + + I+
Sbjct: 220 MAELLTGRTLFPGTDHIDQLKLIL 243
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 59/147 (40%), Gaps = 47/147 (31%)
Query: 210 FYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXX 269
+++ Q + ++ IH N +HRD+KP NLLL+ +K+ DFGL + D +
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH--------- 178
Query: 270 XXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK 329
D G F RW Y APE++L
Sbjct: 179 ----------DHTG-FLTEYVATRW--------------------------YRAPEIMLN 201
Query: 330 -KGYGMECDWWSLGAIMYEMLVGYPPF 355
KGY D WS+G I+ EML P F
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 81/216 (37%), Gaps = 65/216 (30%)
Query: 210 FYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXX 269
+++ Q + ++ IH N +HRD+KP NLLL+ +K+ DFGL + D +
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH--------- 182
Query: 270 XXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK 329
D G E RW Y APE++L
Sbjct: 183 ----------DHTGFLTEY-VATRW--------------------------YRAPEIMLN 205
Query: 330 -KGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKD 388
KGY D WS+G I+ EML P F H+ + L +P +D
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK----------HYLDQLNHILGILGSPSQED 255
Query: 389 LICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLY 424
L C + + L +L P + W++L+
Sbjct: 256 LNCIINLKARNYLLSL--------PHKNKVPWNRLF 283
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
++ + L+ +G G FGEV + + A+K LK+ M + AE NL+
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMK 59
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
++ +V+LY + E +Y+I EY+ G + + + AQ +
Sbjct: 60 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 118
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
I + NYIHR+++ N+L+ K++DFGL + ++ +A
Sbjct: 119 AFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTA 162
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 99/262 (37%), Gaps = 68/262 (25%)
Query: 101 HKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLL 160
H I + ++ ++GRGAFG V C+ K A+K+++ S + + E L
Sbjct: 3 HMIDYKEIEVEEVVGRGAFGVV--CKAKWRAKDVAIKQIE-----SESERKAFIVELRQL 55
Query: 161 AEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR------FYIAQ 214
+ V IVKLY + + + L+MEY GG + A +Q
Sbjct: 56 SRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQ 113
Query: 215 SVLAIESIHKHNYIHRDIKPDNLLLDQNGH-MKLSDFGLCKPLDCTNLSAIXXXXXXXXX 273
V + S+ IHRD+KP NLLL G +K+ DFG
Sbjct: 114 GVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG---------------------- 151
Query: 274 XXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYG 333
+ D+ H N+ A+ +APEV Y
Sbjct: 152 ---TACDIQ-------------------THMTNNKGSAAW--------MAPEVFEGSNYS 181
Query: 334 MECDWWSLGAIMYEMLVGYPPF 355
+CD +S G I++E++ PF
Sbjct: 182 EKCDVFSWGIILWEVITRRKPF 203
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 81/216 (37%), Gaps = 65/216 (30%)
Query: 210 FYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXX 269
+++ Q + ++ IH N +HRD+KP NLLL+ +K+ DFGL + D +
Sbjct: 136 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH--------- 186
Query: 270 XXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK 329
D G E RW Y APE++L
Sbjct: 187 ----------DHTGFLTEY-VATRW--------------------------YRAPEIMLN 209
Query: 330 -KGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKD 388
KGY D WS+G I+ EML P F H+ + L +P +D
Sbjct: 210 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK----------HYLDQLNHILGILGSPSQED 259
Query: 389 LICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLY 424
L C + + L +L P + W++L+
Sbjct: 260 LNCIINLKARNYLLSL--------PHKNKVPWNRLF 287
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 81/216 (37%), Gaps = 65/216 (30%)
Query: 210 FYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXX 269
+++ Q + ++ IH N +HRD+KP NLLL+ +K+ DFGL + D +
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH--------- 178
Query: 270 XXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK 329
D G E RW Y APE++L
Sbjct: 179 ----------DHTGFLTEY-VATRW--------------------------YRAPEIMLN 201
Query: 330 -KGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKD 388
KGY D WS+G I+ EML P F H+ + L +P +D
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK----------HYLDQLNHILGILGSPSQED 251
Query: 389 LICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLY 424
L C + + L +L P + W++L+
Sbjct: 252 LNCIINLKARNYLLSL--------PHKNKVPWNRLF 279
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 111/289 (38%), Gaps = 62/289 (21%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLK-KSEMLSRGQVEHVRAERNLLAEV 163
+ DF+ + +GRG FG V + K YA+K+++ + L+R E V E LA++
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAR---EKVMREVKALAKL 60
Query: 164 ASHCIVKLYYSFQDAE------------YLYLIMEYLPG---GDVXXXXXXXXXXXXXVA 208
IV+ + ++ + YLY+ M+ D V
Sbjct: 61 EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120
Query: 209 RFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXX 268
Q A+E +H +HRD+KP N+ + +K+ DFGL
Sbjct: 121 LHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLV--------------- 165
Query: 269 XXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL 328
+MD D EQ + VGT Y++PE +
Sbjct: 166 --------TAMDQDEE--------------EQTVLTPMPAYARHTGQVGTKLYMSPEQIH 203
Query: 329 KKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFP 377
Y + D +SLG I++E+L PF + + R + +N LKFP
Sbjct: 204 GNSYSHKVDIFSLGLILFELLY---PFSTQ--MERVRTLTDVRN-LKFP 246
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 81/216 (37%), Gaps = 65/216 (30%)
Query: 210 FYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXX 269
+++ Q + ++ IH N +HRD+KP NLLL+ +K+ DFGL + D +
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH--------- 198
Query: 270 XXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK 329
D G E RW Y APE++L
Sbjct: 199 ----------DHTGFLTEY-VATRW--------------------------YRAPEIMLN 221
Query: 330 -KGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKD 388
KGY D WS+G I+ EML P F H+ + L +P +D
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK----------HYLDQLNHILGILGSPSQED 271
Query: 389 LICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLY 424
L C + + L +L P + W++L+
Sbjct: 272 LNCIINLKARNYLLSL--------PHKNKVPWNRLF 299
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 81/216 (37%), Gaps = 65/216 (30%)
Query: 210 FYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXX 269
+++ Q + ++ IH N +HRD+KP NLLL+ +K+ DFGL + D +
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH--------- 182
Query: 270 XXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK 329
D G E RW Y APE++L
Sbjct: 183 ----------DHTGFLTEY-VATRW--------------------------YRAPEIMLN 205
Query: 330 -KGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKD 388
KGY D WS+G I+ EML P F H+ + L +P +D
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK----------HYLDQLNHILGILGSPSQED 255
Query: 389 LICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLY 424
L C + + L +L P + W++L+
Sbjct: 256 LNCIINLKARNYLLSL--------PHKNKVPWNRLF 283
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 81/216 (37%), Gaps = 65/216 (30%)
Query: 210 FYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXX 269
+++ Q + ++ IH N +HRD+KP NLLL+ +K+ DFGL + D +
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH--------- 180
Query: 270 XXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK 329
D G E RW Y APE++L
Sbjct: 181 ----------DHTGFLTEY-VATRW--------------------------YRAPEIMLN 203
Query: 330 -KGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKD 388
KGY D WS+G I+ EML P F H+ + L +P +D
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK----------HYLDQLNHILGILGSPSQED 253
Query: 389 LICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLY 424
L C + + L +L P + W++L+
Sbjct: 254 LNCIINLKARNYLLSL--------PHKNKVPWNRLF 281
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 59/147 (40%), Gaps = 47/147 (31%)
Query: 210 FYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXX 269
+++ Q + ++ IH N +HRD+KP NLLL+ +K+ DFGL + D +
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH--------- 178
Query: 270 XXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK 329
D G F RW Y APE++L
Sbjct: 179 ----------DHTG-FLTEYVATRW--------------------------YRAPEIMLN 201
Query: 330 -KGYGMECDWWSLGAIMYEMLVGYPPF 355
KGY D WS+G I+ EML P F
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 81/216 (37%), Gaps = 65/216 (30%)
Query: 210 FYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXX 269
+++ Q + ++ IH N +HRD+KP NLLL+ +K+ DFGL + D +
Sbjct: 133 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH--------- 183
Query: 270 XXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK 329
D G E RW Y APE++L
Sbjct: 184 ----------DHTGFLTEY-VATRW--------------------------YRAPEIMLN 206
Query: 330 -KGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKD 388
KGY D WS+G I+ EML P F H+ + L +P +D
Sbjct: 207 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK----------HYLDQLNHILGILGSPSQED 256
Query: 389 LICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLY 424
L C + + L +L P + W++L+
Sbjct: 257 LNCIINLKARNYLLSL--------PHKNKVPWNRLF 284
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 81/216 (37%), Gaps = 65/216 (30%)
Query: 210 FYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXX 269
+++ Q + ++ IH N +HRD+KP NLLL+ +K+ DFGL + D +
Sbjct: 134 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH--------- 184
Query: 270 XXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK 329
D G E RW Y APE++L
Sbjct: 185 ----------DHTGFLTEY-VATRW--------------------------YRAPEIMLN 207
Query: 330 -KGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKD 388
KGY D WS+G I+ EML P F H+ + L +P +D
Sbjct: 208 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK----------HYLDQLNHILGILGSPSQED 257
Query: 389 LICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLY 424
L C + + L +L P + W++L+
Sbjct: 258 LNCIINLKARNYLLSL--------PHKNKVPWNRLF 285
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 81/216 (37%), Gaps = 65/216 (30%)
Query: 210 FYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXX 269
+++ Q + ++ IH N +HRD+KP NLLL+ +K+ DFGL + D +
Sbjct: 125 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH--------- 175
Query: 270 XXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK 329
D G E RW Y APE++L
Sbjct: 176 ----------DHTGFLTEY-VATRW--------------------------YRAPEIMLN 198
Query: 330 -KGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKD 388
KGY D WS+G I+ EML P F H+ + L +P +D
Sbjct: 199 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK----------HYLDQLNHILGILGSPSQED 248
Query: 389 LICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLY 424
L C + + L +L P + W++L+
Sbjct: 249 LNCIINLKARNYLLSL--------PHKNKVPWNRLF 276
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 81/216 (37%), Gaps = 65/216 (30%)
Query: 210 FYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXX 269
+++ Q + ++ IH N +HRD+KP NLLL+ +K+ DFGL + D +
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH--------- 182
Query: 270 XXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK 329
D G E RW Y APE++L
Sbjct: 183 ----------DHTGFLTEY-VATRW--------------------------YRAPEIMLN 205
Query: 330 -KGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKD 388
KGY D WS+G I+ EML P F H+ + L +P +D
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK----------HYLDQLNHILGILGSPSQED 255
Query: 389 LICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLY 424
L C + + L +L P + W++L+
Sbjct: 256 LNCIINLKARNYLLSL--------PHKNKVPWNRLF 283
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 81/216 (37%), Gaps = 65/216 (30%)
Query: 210 FYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXX 269
+++ Q + ++ IH N +HRD+KP NLLL+ +K+ DFGL + D +
Sbjct: 126 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH--------- 176
Query: 270 XXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK 329
D G E RW Y APE++L
Sbjct: 177 ----------DHTGFLTEY-VATRW--------------------------YRAPEIMLN 199
Query: 330 -KGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKD 388
KGY D WS+G I+ EML P F H+ + L +P +D
Sbjct: 200 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK----------HYLDQLNHILGILGSPSQED 249
Query: 389 LICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLY 424
L C + + L +L P + W++L+
Sbjct: 250 LNCIINLKARNYLLSL--------PHKNKVPWNRLF 277
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 81/216 (37%), Gaps = 65/216 (30%)
Query: 210 FYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXX 269
+++ Q + ++ IH N +HRD+KP NLLL+ +K+ DFGL + D +
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH--------- 180
Query: 270 XXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK 329
D G E RW Y APE++L
Sbjct: 181 ----------DHTGFLTEY-VATRW--------------------------YRAPEIMLN 203
Query: 330 -KGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKD 388
KGY D WS+G I+ EML P F H+ + L +P +D
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK----------HYLDQLNHILGILGSPSQED 253
Query: 389 LICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLY 424
L C + + L +L P + W++L+
Sbjct: 254 LNCIINLKARNYLLSL--------PHKNKVPWNRLF 281
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 59/147 (40%), Gaps = 47/147 (31%)
Query: 210 FYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXX 269
+++ Q + ++ IH N +HRD+KP NLLL+ +K+ DFGL + D +
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH--------- 182
Query: 270 XXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK 329
D G E RW Y APE++L
Sbjct: 183 ----------DHTGFLTEY-VATRW--------------------------YRAPEIMLN 205
Query: 330 -KGYGMECDWWSLGAIMYEMLVGYPPF 355
KGY D WS+G I+ EML P F
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G G +GEV KK A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXXXVARFYIAQSVL-AIESIHKHNYIHRD 231
Y+I+E++ G++ V Y+A + A+E + K N+IHRD
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 232 IKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ N L+ +N +K++DFGL + + +A
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G G +GEV KK A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXXXVARFYIAQSVL-AIESIHKHNYIHRD 231
Y+I+E++ G++ V Y+A + A+E + K N+IHRD
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 232 IKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ N L+ +N +K++DFGL + + +A
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G G +GEV KK A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXXXVARFYIAQSVL-AIESIHKHNYIHRD 231
Y+I+E++ G++ V Y+A + A+E + K N+IHRD
Sbjct: 78 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 137
Query: 232 IKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ N L+ +N +K++DFGL + + +A
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTGDTXTA 169
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G G +GEV KK A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXXXVARFYIAQSVL-AIESIHKHNYIHRD 231
Y+I+E++ G++ V Y+A + A+E + K N+IHRD
Sbjct: 82 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 232 IKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ N L+ +N +K++DFGL + + +A
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA 173
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
++ + L+ +G G GEV + + A+K LK+ M + AE NL+
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMK 63
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
++ +V+LY + E +Y+I EY+ G + + + AQ +
Sbjct: 64 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
I + NYIHRD++ N+L+ K++DFGL + ++ +A
Sbjct: 123 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTA 166
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G G +GEV KK A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXXXVARFYIAQSVL-AIESIHKHNYIHRD 231
Y+I E++ G++ V Y+A + A+E + K N+IHRD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 232 IKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ N L+ +N +K++DFGL + + +A
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G G +GEV KK A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXXXVARFYIAQSVL-AIESIHKHNYIHRD 231
Y+I E++ G++ V Y+A + A+E + K N+IHRD
Sbjct: 78 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 137
Query: 232 IKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ N L+ +N +K++DFGL + + +A
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA 169
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G G +GEV KK A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXXXVARFYIAQSVL-AIESIHKHNYIHRD 231
Y+I E++ G++ V Y+A + A+E + K N+IHRD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 232 IKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ N L+ +N +K++DFGL + + +A
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G G +GEV KK A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXXXVARFYIAQSVL-AIESIHKHNYIHRD 231
Y+I E++ G++ V Y+A + A+E + K N+IHRD
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 232 IKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ N L+ +N +K++DFGL + + +A
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA 173
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G G +GEV KK A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXXXVARFYIAQSVL-AIESIHKHNYIHRD 231
Y+I E++ G++ V Y+A + A+E + K N+IHRD
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 232 IKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ N L+ +N +K++DFGL + + +A
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA 170
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G G +GEV KK A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXXXVARFYIAQSVL-AIESIHKHNYIHRD 231
Y+I E++ G++ V Y+A + A+E + K N+IHRD
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 232 IKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ N L+ +N +K++DFGL + + +A
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTXTA 173
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G G +GEV KK A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 80
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXXXVARFYIAQSVL-AIESIHKHNYIHRD 231
Y+I E++ G++ V Y+A + A+E + K N+IHRD
Sbjct: 81 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 140
Query: 232 IKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ N L+ +N +K++DFGL + + +A
Sbjct: 141 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA 172
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G G +GEV KK A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXXXVARFYIAQSVL-AIESIHKHNYIHRD 231
Y+I E++ G++ V Y+A + A+E + K N+IHRD
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 232 IKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ N L+ +N +K++DFGL + + +A
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA 170
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G G +GEV KK A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXXXVARFYIAQSVL-AIESIHKHNYIHRD 231
Y+I E++ G++ V Y+A + A+E + K N+IHRD
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 232 IKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ N L+ +N +K++DFGL + + +A
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA 173
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G G +GEV KK A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 89
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXXXVARFYIAQSVL-AIESIHKHNYIHRD 231
Y+I E++ G++ V Y+A + A+E + K N+IHRD
Sbjct: 90 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 149
Query: 232 IKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ N L+ +N +K++DFGL + + +A
Sbjct: 150 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA 181
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G G +GEV KK A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXXXVARFYIAQSVL-AIESIHKHNYIHRD 231
Y+I E++ G++ V Y+A + A+E + K N+IHRD
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 232 IKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ N L+ +N +K++DFGL + + +A
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA 173
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G G +GEV KK A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXXXVARFYIAQSVL-AIESIHKHNYIHRD 231
Y+I E++ G++ V Y+A + A+E + K N+IHRD
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 232 IKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ N L+ +N +K++DFGL + + +A
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA 170
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G G +GEV KK A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXXXVARFYIAQSVL-AIESIHKHNYIHRD 231
Y+I E++ G++ V Y+A + A+E + K N+IHRD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 232 IKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ N L+ +N +K++DFGL + + +A
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
+G G +GEV KK A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXXXVARFYIAQSVL-AIESIHKHNYIHRD 231
Y+I E++ G++ V Y+A + A+E + K N+IHRD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 232 IKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ N L+ +N +K++DFGL + + +A
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 96/265 (36%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L +G GA+G V + + A+KKL + S E LL + ++
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRP-FQSLIHARRTYRELRLLKHLKHENVIG 91
Query: 171 LY------YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L S +D +YL+ L G D+ V +F + Q + ++ IH
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTT-LMGADLNNIVKSQALSDEHV-QFLVYQLLRGLKYIHS 149
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
IHRD+KP N+ ++++ +++ DFGL + D +
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYV-------------------- 189
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 190 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + ++I+
Sbjct: 218 IMAELLQGKALFPGSDYIDQLKRIM 242
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 105/282 (37%), Gaps = 77/282 (27%)
Query: 92 ETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLK------KSEML 145
ET+Y KR + DF + +IG G FG+V + + G Y ++++K + E+
Sbjct: 1 ETKYTVDKRFGM---DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVK 57
Query: 146 SRGQVEHVRAER--------NLLAEVASHCIVKLYYSFQDAEY--------LYLIMEYLP 189
+ +++HV + E + + Y ++++ L++ ME+
Sbjct: 58 ALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCD 117
Query: 190 GGDVXX--XXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKL 247
G + +A Q ++ IH IHRD+KP N+ L +K+
Sbjct: 118 KGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKI 177
Query: 248 SDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQIN 307
DFGL L G+R +S
Sbjct: 178 GDFGLVTSL-------------------------------KNDGKRTRSK---------- 196
Query: 308 RRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 349
GT Y++PE + + YG E D ++LG I+ E+L
Sbjct: 197 ---------GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I + L +G+G FGEV + + + A+K LK M ++ + + L
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRH 72
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
E +V+LY + E +Y++MEY+ G + + + AQ +
Sbjct: 73 EK----LVQLYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ + NY+HRD++ N+L+ +N K++DFGL + ++ +A
Sbjct: 128 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 171
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 118/291 (40%), Gaps = 69/291 (23%)
Query: 135 AMKKLKKSEMLSRGQVEH---VRAERNLLAEVAS--HCIVKLYYSFQDAEYLYLIMEYL- 188
A+K ++K + G++ + V E LL +V+S +++L F+ + LI+E
Sbjct: 80 AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 139
Query: 189 PGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQN-GHMKL 247
P D+ +AR + Q + A+ H +HRDIK +N+L+D N G +KL
Sbjct: 140 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 199
Query: 248 SDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQIN 307
DFG L T + D D G R SP E +++ + +
Sbjct: 200 IDFGSGALLKDTVYT-----------------DFD--------GTRVYSPPEWIRYHRYH 234
Query: 308 RRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKI 367
R A WSLG ++Y+M+ G PF D+ + R
Sbjct: 235 GRSAAV-------------------------WSLGILLYDMVCGDIPFEHDEEII--RGQ 267
Query: 368 VHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDI 418
V ++ R++ E + LI L T E+I+ HPW +D+
Sbjct: 268 VFFRQ--------RVSSECQHLIRWCLALRPSDRPTF--EEIQNHPWMQDV 308
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 104/283 (36%), Gaps = 55/283 (19%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
+D L IGRG FGEV + + + A+K + E L E +L + +
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR--ETLPPDLKAKFLQEARILKQYSH 171
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIESIHK 224
IV+L + +Y++ME + GGD + + +E +
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
IHRD+ N L+ + +K+SDFG+ + + DG
Sbjct: 232 KCCIHRDLAARNCLVTEKNVLKISDFGMSRE------------------------EADGV 267
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
+ SG R + P++ + APE L Y E D WS G +
Sbjct: 268 YAASGGLR--QVPVK---------------------WTAPEALNYGRYSSESDVWSFGIL 304
Query: 345 MYEML-VGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEA 386
++E +G P Y + R+ V L PE L P+A
Sbjct: 305 LWETFSLGASP-YPNLSNQQTREFVEKGGRLPCPE---LCPDA 343
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I + L +G+G FGEV + + + A+K LK M ++ + + L
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRH 72
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
E +V+LY + E +Y+++EY+ G + + + AQ +
Sbjct: 73 EK----LVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ + NY+HRD++ N+L+ +N K++DFGL + ++ +A
Sbjct: 128 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTA 171
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I + L +G+G FGEV + + + A+K LK M E E ++
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMK 68
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
++ +V+LY + E +Y++ EY+ G + + + AQ +
Sbjct: 69 KIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ + NY+HRD++ N+L+ +N K++DFGL + ++ +A
Sbjct: 128 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 171
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 96/265 (36%), Gaps = 62/265 (23%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L +G GA+G V + + A+KKL + S E LL + ++
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRP-FQSLIHARRTYRELRLLKHLKHENVIG 91
Query: 171 LY------YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L S +D +YL+ L G D+ V +F + Q + ++ IH
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTT-LMGADLNNIVKCQALSDEHV-QFLVYQLLRGLKYIHS 149
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
IHRD+KP N+ ++++ +++ DFGL + D +
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYV-------------------- 189
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 343
RW Y APE++L Y D WS+G
Sbjct: 190 ------ATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 344 IMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E+L G F D + ++I+
Sbjct: 218 IMAELLQGKALFPGSDYIDQLKRIM 242
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I + L +G+G FGEV + + + A+K LK M E E ++
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMK 68
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
++ +V+LY + E +Y+++EY+ G + + + AQ +
Sbjct: 69 KLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ + NY+HRD++ N+L+ +N K++DFGL + ++ +A
Sbjct: 128 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 171
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I + L +G+G FGEV + + + A+K LK M E E ++
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMK 61
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
++ +V+LY + E +Y++ EY+ G + + + AQ +
Sbjct: 62 KLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 120
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ + NY+HRD++ N+L+ +N K++DFGL + ++ +A
Sbjct: 121 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 164
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 95/257 (36%), Gaps = 64/257 (24%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKL-- 171
+G G FG V + +G A+K+ ++ LS E E ++ ++ +V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 172 ----YYSFQDAEYLYLIMEYLPGGDVXXXXXXXXX---XXXXVARFYIAQSVLAIESIHK 224
+ L MEY GGD+ R ++ A+ +H+
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 140
Query: 225 HNYIHRDIKPDNLLLD---QNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
+ IHRD+KP+N++L Q K+ D G K
Sbjct: 141 NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--------------------------- 173
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 341
++++ +L VGT Y+APE+L +K Y + D+WS
Sbjct: 174 -----------------------ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSF 210
Query: 342 GAIMYEMLVGYPPFYSD 358
G + +E + G+ PF +
Sbjct: 211 GTLAFECITGFRPFLPN 227
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 95/257 (36%), Gaps = 64/257 (24%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKL-- 171
+G G FG V + +G A+K+ ++ LS E E ++ ++ +V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 172 ----YYSFQDAEYLYLIMEYLPGGDVXXXXXXXXX---XXXXVARFYIAQSVLAIESIHK 224
+ L MEY GGD+ R ++ A+ +H+
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139
Query: 225 HNYIHRDIKPDNLLLD---QNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
+ IHRD+KP+N++L Q K+ D G K
Sbjct: 140 NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--------------------------- 172
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 341
++++ +L VGT Y+APE+L +K Y + D+WS
Sbjct: 173 -----------------------ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSF 209
Query: 342 GAIMYEMLVGYPPFYSD 358
G + +E + G+ PF +
Sbjct: 210 GTLAFECITGFRPFLPN 226
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 92/261 (35%), Gaps = 75/261 (28%)
Query: 107 DFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH 166
DF + +IG G FG+V + + G Y +K++K + E E LA++
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHV 64
Query: 167 CIVKLYYSFQDAEY----------------LYLIMEYLPGGDVXX--XXXXXXXXXXXVA 208
IV + +Y L++ ME+ G + +A
Sbjct: 65 NIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA 124
Query: 209 RFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXX 268
Q ++ IH I+RD+KP N+ L +K+ DFGL L
Sbjct: 125 LELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSL------------ 172
Query: 269 XXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL 328
G+R +S GT Y++PE +
Sbjct: 173 -------------------KNDGKRXRSK-------------------GTLRYMSPEQIS 194
Query: 329 KKGYGMECDWWSLGAIMYEML 349
+ YG E D ++LG I+ E+L
Sbjct: 195 SQDYGKEVDLYALGLILAELL 215
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I + L +G+G FGEV + + + A+K LK M E E ++
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMK 57
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
++ +V+LY + E +Y++ EY+ G + + + AQ +
Sbjct: 58 KLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 116
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ + NY+HRD++ N+L+ +N K++DFGL + ++ +A
Sbjct: 117 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 160
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I + L +G+G FGEV + + + A+K LK M ++ + + L
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRH 63
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
E +V+LY + E +Y++ EY+ G + + + AQ +
Sbjct: 64 EK----LVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 118
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ + NY+HRD++ N+L+ +N K++DFGL + ++ +A
Sbjct: 119 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 162
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I + L +G+G FGEV + + + A+K LK M E E ++
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMK 68
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
++ +V+LY + E +Y++ EY+ G + + + AQ +
Sbjct: 69 KLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ + NY+HRD++ N+L+ +N K++DFGL + ++ +A
Sbjct: 128 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 171
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 107 DFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH 166
D + +G G +GEV KK A+K LK+ M +VE E ++ E+
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 276
Query: 167 CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXXXVARFYIAQSVL-AIESIHK 224
+V+L Y+I E++ G++ V Y+A + A+E + K
Sbjct: 277 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 336
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
N+IHR++ N L+ +N +K++DFGL +
Sbjct: 337 KNFIHRNLAARNCLVGENHLVKVADFGLSR 366
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 115/295 (38%), Gaps = 78/295 (26%)
Query: 92 ETEYMRLKRHKISVDDFDLLTIIGRGAFGEV------RLCQEKKSGNIYAMKKLKKSEML 145
+T +KRH I L +G GAFG+V LC E+ + A+K LK +
Sbjct: 4 DTFVQHIKRHNIV-----LKRELGEGAFGKVFLAECYNLCPEQDK-ILVAVKTLKDASDN 57
Query: 146 SRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXX 205
+R + E LL + IVK Y + + L ++ EY+ GD+
Sbjct: 58 AR---KDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAV 114
Query: 206 XVAR------------FYIAQSVLA-IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGL 252
+A +IAQ + A + + +++HRD+ N L+ +N +K+ DFG+
Sbjct: 115 LMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGM 174
Query: 253 CKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLA 312
S DV + + ++
Sbjct: 175 -------------------------SRDV----------------------YSTDYYRVG 187
Query: 313 YSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV-GYPPFY--SDDPVTTC 364
T+ ++ PE ++ + + E D WSLG +++E+ G P+Y S++ V C
Sbjct: 188 GHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIEC 242
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 107/273 (39%), Gaps = 63/273 (23%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLK-KSEMLSRGQVEHVRAE-RNLLAE 162
+D +++ ++IG+G+FG+V ++ A+K +K K L++ Q+E E N
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 112
Query: 163 VASHCIVKLYYSFQDAEYLYLIMEYLPGG--DVXXXXXXXXXXXXXVARFYIAQ---SVL 217
+ IV L F +L L+ E L D+ +F AQ + L
Sbjct: 113 EMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKF--AQQMCTAL 170
Query: 218 AIESIHKHNYIHRDIKPDNLLL--DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
+ + + IH D+KP+N+LL + +K+ DFG
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG------------------------ 206
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
S C Q+ +R Y + + Y +PEVLL Y +
Sbjct: 207 ------------SSC--------------QLGQR--IYQXIQSRFYRSPEVLLGMPYDLA 238
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIV 368
D WSLG I+ EM G P F + V KIV
Sbjct: 239 IDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 90 RKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQ 149
+ +T+ + +I + L +G+G FGEV + + + A+K LK M
Sbjct: 251 KPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----S 305
Query: 150 VEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR 209
E E ++ ++ +V+LY + E +Y++ EY+ G + + +
Sbjct: 306 PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ 364
Query: 210 FY--IAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
AQ + + + NY+HRD++ N+L+ +N K++DFGL +
Sbjct: 365 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 411
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I + L +G+G FGEV + + + A+K LK M ++ + + L
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRH 72
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
E +V+LY + E +Y++ EY+ G + + + AQ +
Sbjct: 73 EK----LVQLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ + NY+HRD++ N+L+ +N K++DFGL + ++ +A
Sbjct: 128 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 171
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 6/159 (3%)
Query: 107 DFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH 166
D + +G G +GEV KK A+K LK+ M +VE E ++ E+
Sbjct: 218 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 273
Query: 167 CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXXXVARFYIAQSVL-AIESIHK 224
+V+L Y+I E++ G++ V Y+A + A+E + K
Sbjct: 274 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 333
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
N+IHR++ N L+ +N +K++DFGL + + +A
Sbjct: 334 KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 372
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 107/273 (39%), Gaps = 63/273 (23%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLK-KSEMLSRGQVEHVRAE-RNLLAE 162
+D +++ ++IG+G+FG+V ++ A+K +K K L++ Q+E E N
Sbjct: 34 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 93
Query: 163 VASHCIVKLYYSFQDAEYLYLIMEYLPGG--DVXXXXXXXXXXXXXVARFYIAQ---SVL 217
+ IV L F +L L+ E L D+ +F AQ + L
Sbjct: 94 EMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKF--AQQMCTAL 151
Query: 218 AIESIHKHNYIHRDIKPDNLLL--DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
+ + + IH D+KP+N+LL + +K+ DFG
Sbjct: 152 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG------------------------ 187
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
S C Q+ +R Y + + Y +PEVLL Y +
Sbjct: 188 ------------SSC--------------QLGQR--IYQXIQSRFYRSPEVLLGMPYDLA 219
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIV 368
D WSLG I+ EM G P F + V KIV
Sbjct: 220 IDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 252
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I + L +G+G FGEV + + + A+K LK M ++ + + L
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRH 238
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
E +V+LY + E +Y++ EY+ G + + + AQ +
Sbjct: 239 EK----LVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 293
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ + NY+HRD++ N+L+ +N K++DFGL + ++ +A
Sbjct: 294 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 337
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I + L +G+G FGEV + + + A+K LK M ++ + + L
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRH 238
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
E +V+LY + E +Y++ EY+ G + + + AQ +
Sbjct: 239 EK----LVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 293
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ + NY+HRD++ N+L+ +N K++DFGL + ++ +A
Sbjct: 294 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 337
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I + L +G+G FGEV + + + A+K LK M E E ++
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMK 65
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
++ +V+LY + E +Y++ EY+ G + + + AQ +
Sbjct: 66 KLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGM 124
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ + NY+HRD++ N+L+ +N K++DFGL + ++ +A
Sbjct: 125 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTA 168
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 22/194 (11%)
Query: 75 DVPEEEQINI-LKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEV---RLCQEKKS 130
DVP EE + L L+R L+ +++ D+F I+GRG FG+V RL
Sbjct: 11 DVPAEEDPEVHLGQLKR-----FSLRELQVASDNFSNKNILGRGGFGKVYKGRLA----D 61
Query: 131 GNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPG 190
G + A+K+LK+ E G+++ + E +++ +++L L+ Y+
Sbjct: 62 GTLVAVKRLKE-ERXQGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMAN 119
Query: 191 GDVXXXXXXXXXXXXXV---ARFYIA-QSVLAIESIHKH---NYIHRDIKPDNLLLDQNG 243
G V + R IA S + +H H IHRD+K N+LLD+
Sbjct: 120 GSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF 179
Query: 244 HMKLSDFGLCKPLD 257
+ DFGL K +D
Sbjct: 180 EAVVGDFGLAKLMD 193
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 109/275 (39%), Gaps = 81/275 (29%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
++ DD + + +GRGA+G V + SG I A+K+++ + + S+ Q + +
Sbjct: 3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRAT-VNSQEQKRLLMDLDISMR 61
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY---------- 211
V V Y + +++ ME + + +FY
Sbjct: 62 TVDCPFTVTFYGALFREGDVWICMELM---------------DTSLDKFYKQVIDKGQTI 106
Query: 212 -------IAQSVL-AIESIH-KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLS 262
IA S++ A+E +H K + IHRD+KP N+L++ G +K+ DFG+ L
Sbjct: 107 PEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL------ 160
Query: 263 AIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYI 322
+ D+D +GC P+ I
Sbjct: 161 -----------VDDVAKDID-----AGC-----------------------KPYMAPERI 181
Query: 323 APEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYS 357
PE L +KGY ++ D WSLG M E+ + P+ S
Sbjct: 182 NPE-LNQKGYSVKSDIWSLGITMIELAILRFPYDS 215
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I + L+ +G G FGEV + + + A+K LK M +E E ++
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTWNGNTKV-AIKTLKPGTMSPESFLE----EAQIMK 59
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
++ +V+LY + E +Y++ EY+ G + + AQ +
Sbjct: 60 KLKHDKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGM 118
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
I + NYIHRD++ N+L+ K++DFGL + ++ +A
Sbjct: 119 AYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTA 162
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 99/266 (37%), Gaps = 64/266 (24%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL-LAEVASH-CI 168
L IG GA G V + A+KKL + + Q RA R L L +V +H I
Sbjct: 29 LKPIGSGAQGIVVAAYDAILERNVAIKKLSRP---FQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 169 VKLYYSF------QDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI 222
+ L F ++ + +Y++ME + D + + Q ++ I+ +
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELM---DANLSQVIQMELDHERMSYLLYQMLVGIKHL 142
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
H IHRD+KP N+++ + +K+ DFGL + + +
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYV---------------- 186
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 342
R +++P EV+L GY D WS+G
Sbjct: 187 -------VTRYYRAP---------------------------EVILGMGYKENVDIWSVG 212
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIV 368
IM EM+ G F D + K++
Sbjct: 213 VIMGEMIKGGVLFPGTDHIDQWNKVI 238
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 6/159 (3%)
Query: 107 DFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH 166
D + +G G +GEV KK A+K LK+ M +VE E ++ E+
Sbjct: 260 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 315
Query: 167 CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXX-XXXXXXXVARFYIAQSVL-AIESIHK 224
+V+L Y+I E++ G++ V Y+A + A+E + K
Sbjct: 316 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 375
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
N+IHR++ N L+ +N +K++DFGL + + +A
Sbjct: 376 KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 414
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 22/194 (11%)
Query: 75 DVPEEEQINI-LKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEV---RLCQEKKS 130
DVP EE + L L+R L+ +++ D+F I+GRG FG+V RL
Sbjct: 3 DVPAEEDPEVHLGQLKR-----FSLRELQVASDNFXNKNILGRGGFGKVYKGRLA----D 53
Query: 131 GNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPG 190
G + A+K+LK+ ++G + E +++ +++L L+ Y+
Sbjct: 54 GXLVAVKRLKEER--TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMAN 111
Query: 191 GDVXXXXXXXXXXXXXV---ARFYIA-QSVLAIESIHKH---NYIHRDIKPDNLLLDQNG 243
G V + R IA S + +H H IHRD+K N+LLD+
Sbjct: 112 GSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF 171
Query: 244 HMKLSDFGLCKPLD 257
+ DFGL K +D
Sbjct: 172 EAVVGDFGLAKLMD 185
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 99/252 (39%), Gaps = 37/252 (14%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV-- 163
+ F ++ +G G FG V LCQ + YA+K ++ + +R + E ++L ++
Sbjct: 35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRS----AKIEADILKKIQN 90
Query: 164 ---ASHCIVKLYYSFQDAEYLYLIMEYL-PGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
++ IVK + F +++ LI E L P + Y + + A+
Sbjct: 91 DDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKAL 150
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
+ K + H D+KP+N+LLD P +L + +
Sbjct: 151 NYLRKMSLTHTDLKPENILLDD-------------PYFEKSLITVRRVTDGKKIQIYRTK 197
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWW 339
+ + GC +KS S + T Y APEV+L G+ + D W
Sbjct: 198 STGIKLIDFGCA-TFKSDYHG-------------SIINTRQYRAPEVILNLGWDVSSDMW 243
Query: 340 SLGAIMYEMLVG 351
S G ++ E+ G
Sbjct: 244 SFGCVLAELYTG 255
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 103/283 (36%), Gaps = 55/283 (19%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
+D L IGRG FGEV + + + A+K + E L E +L + +
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR--ETLPPDLKAKFLQEARILKQYSH 171
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIESIHK 224
IV+L + +Y++ME + GGD + + +E +
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
IHRD+ N L+ + +K+SDFG+ + + DG
Sbjct: 232 KCCIHRDLAARNCLVTEKNVLKISDFGMSRE------------------------EADGV 267
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
SG R + P++ + APE L Y E D WS G +
Sbjct: 268 XAASGGLR--QVPVK---------------------WTAPEALNYGRYSSESDVWSFGIL 304
Query: 345 MYEML-VGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEA 386
++E +G P Y + R+ V L PE L P+A
Sbjct: 305 LWETFSLGASP-YPNLSNQQTREFVEKGGRLPCPE---LCPDA 343
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 98 LKRHKISVDDFDLLTIIGRGAFGEVR--LCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRA 155
LKR + + D +L G G FG VR + + +K A+K LK+ + E +
Sbjct: 6 LKRDNLLIADIEL----GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMR 59
Query: 156 ERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXX--XXXVARFYIA 213
E ++ ++ + IV+L Q AE L L+ME GG + VA +
Sbjct: 60 EAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAEL-LH 117
Query: 214 QSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
Q + ++ + + N++HRD+ N+LL + K+SDFGL K L
Sbjct: 118 QVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I + L +G+G FGEV + + + A+K LK M E E ++
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMK 65
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
++ +V+LY + E +Y++ EY+ G + + + AQ +
Sbjct: 66 KLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGM 124
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ + NY+HRD++ N+L+ +N K++DFGL + ++ +A
Sbjct: 125 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 168
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 107/273 (39%), Gaps = 63/273 (23%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLK-KSEMLSRGQVEHVRAE-RNLLAE 162
+D +++ ++IG+G+FG+V ++ A+K +K K L++ Q+E E N
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 112
Query: 163 VASHCIVKLYYSFQDAEYLYLIMEYLPGG--DVXXXXXXXXXXXXXVARFYIAQ---SVL 217
+ IV L F +L L+ E L D+ +F AQ + L
Sbjct: 113 EMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKF--AQQMCTAL 170
Query: 218 AIESIHKHNYIHRDIKPDNLLL--DQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
+ + + IH D+KP+N+LL + +K+ DFG
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFG------------------------ 206
Query: 276 XXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGME 335
S C Q+ +R Y + + Y +PEVLL Y +
Sbjct: 207 ------------SSC--------------QLGQR--IYQXIQSRFYRSPEVLLGMPYDLA 238
Query: 336 CDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIV 368
D WSLG I+ EM G P F + V KIV
Sbjct: 239 IDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE 162
+++ + LL IG+G FG+V L + GN A+K +K + AE +++ +
Sbjct: 18 LNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQ 70
Query: 163 VASHCIVKLY-YSFQDAEYLYLIMEYLPGG---DVXXXXXXXXXXXXXVARFYIAQSVLA 218
+ +V+L ++ LY++ EY+ G D + +F + A
Sbjct: 71 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DVCEA 129
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCT 259
+E + +N++HRD+ N+L+ ++ K+SDFGL K T
Sbjct: 130 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 170
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE 162
+++ + LL IG+G FG+V L + GN A+K +K + AE +++ +
Sbjct: 190 LNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQ 242
Query: 163 VASHCIVKLY-YSFQDAEYLYLIMEYLPGG---DVXXXXXXXXXXXXXVARFYIAQSVLA 218
+ +V+L ++ LY++ EY+ G D + +F + A
Sbjct: 243 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DVCEA 301
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCT 259
+E + +N++HRD+ N+L+ ++ K+SDFGL K T
Sbjct: 302 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 342
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE 162
+++ + LL IG+G FG+V L + GN A+K +K + AE +++ +
Sbjct: 9 LNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQ 61
Query: 163 VASHCIVKLY-YSFQDAEYLYLIMEYLPGG---DVXXXXXXXXXXXXXVARFYIAQSVLA 218
+ +V+L ++ LY++ EY+ G D + +F + A
Sbjct: 62 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DVCEA 120
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCT 259
+E + +N++HRD+ N+L+ ++ K+SDFGL K T
Sbjct: 121 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 161
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE 162
+++ + LL IG+G FG+V L + GN A+K +K + AE +++ +
Sbjct: 3 LNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQ 55
Query: 163 VASHCIVKLY-YSFQDAEYLYLIMEYLPGG---DVXXXXXXXXXXXXXVARFYIAQSVLA 218
+ +V+L ++ LY++ EY+ G D + +F + A
Sbjct: 56 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DVCEA 114
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCT 259
+E + +N++HRD+ N+L+ ++ K+SDFGL K T
Sbjct: 115 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I + L +G+G FGEV + + + A+K LK M ++ + + L
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRH 72
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
E +V+LY + E +Y++ EY+ G + + + AQ +
Sbjct: 73 EK----LVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ + NY+HRD+ N+L+ +N K++DFGL + ++ +A
Sbjct: 128 AYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTA 171
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I + L +G+G FGEV + + + A+K LK M ++ + + L
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRH 238
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
E +V+LY + E +Y++ EY+ G + + + AQ +
Sbjct: 239 EK----LVQLY-AVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 293
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ + NY+HRD++ N+L+ +N K++DFGL + ++ +A
Sbjct: 294 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 337
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 81/176 (46%), Gaps = 8/176 (4%)
Query: 90 RKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQ 149
+ +T+ + +I + L +G+G FGEV + + + A+K LK M
Sbjct: 169 KPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGNM----S 223
Query: 150 VEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR 209
E E ++ ++ +V+LY + E +Y++ EY+ G + + +
Sbjct: 224 PEAFLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ 282
Query: 210 FY--IAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
AQ + + + NY+HRD++ N+L+ +N K++DFGL + ++ +A
Sbjct: 283 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTA 338
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I + L +G+G FGEV + + + A+K LK M ++ + + L
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRH 72
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
E +V+LY + E +Y++ EY+ G + + + AQ +
Sbjct: 73 EK----LVQLYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ + NY+HRD++ N+L+ +N K++DFGL + ++ +A
Sbjct: 128 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 171
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 99/266 (37%), Gaps = 64/266 (24%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL-LAEVASH-CI 168
L IG GA G V + A+KKL + + Q RA R L L +V +H I
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRP---FQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 169 VKLYYSF------QDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI 222
+ L F ++ + +Y++ME + D + + Q ++ I+ +
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELM---DANLSQVIQMELDHERMSYLLYQMLVGIKHL 142
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
H IHRD+KP N+++ + +K+ DFGL + + +
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYV---------------- 186
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 342
R +++P EV+L GY D WS+G
Sbjct: 187 -------VTRYYRAP---------------------------EVILGMGYKENVDIWSVG 212
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIV 368
IM EM+ G F D + K++
Sbjct: 213 VIMGEMIKGGVLFPGTDHIDQWNKVI 238
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSG--NIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
+D +IG G FG+V + KK G A+K++K E S+ E +L ++
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK--EYASKDDHRDFAGELEVLCKL 82
Query: 164 ASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES- 221
H I+ L + + YLYL +EY P G++ A F IA S + S
Sbjct: 83 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA-FAIANSTASTLSS 141
Query: 222 ----------------IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + +IHRD+ N+L+ +N K++DFGL +
Sbjct: 142 QQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 9/154 (5%)
Query: 107 DFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEH---VRAERNLLAEV 163
++ L ++G+G FG V A+K + ++ +L + E LL +V
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 164 AS----HCIVKLYYSFQDAEYLYLIMEY-LPGGDVXXXXXXXXXXXXXVARFYIAQSVLA 218
+ +++L F+ E L++E LP D+ +R + Q V A
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAA 151
Query: 219 IESIHKHNYIHRDIKPDNLLLD-QNGHMKLSDFG 251
I+ H +HRDIK +N+L+D + G KL DFG
Sbjct: 152 IQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG 185
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 13/106 (12%)
Query: 317 GTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLK 375
GT Y PE + + Y + WSLG ++Y+M+ G PF D + + L
Sbjct: 200 GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEIL--------EAELH 251
Query: 376 FPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWD 421
FP A ++P+ LI R L +L E+I PW + A D
Sbjct: 252 FP--AHVSPDCCALIRRCLAPKPSSRPSL--EEILLDPWMQTPAED 293
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 105/261 (40%), Gaps = 47/261 (18%)
Query: 108 FDLLTIIGRGAFGEVRLC-QEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVA-- 164
+++++ +G G FG V C ++ G A+K +K E E R E N+L ++
Sbjct: 35 YEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYK----EAARLEINVLEKINEK 90
Query: 165 ----SHCIVKLYYSFQDAEYLYLIMEYL--PGGDVXXXXXXXXXXXXXVARFYIAQSVLA 218
+ V+++ F ++ + E L D V R Q A
Sbjct: 91 DPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQV-RHMAFQLCQA 149
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
++ +H + H D+KP+N+L N +L+ + L K D ++ +
Sbjct: 150 VKFLHDNKLTHTDLKPENILF-VNSDYELT-YNLEKKRDERSVKSTAV------------ 195
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDW 338
R + G + + H I V T Y APEV+L+ G+ CD
Sbjct: 196 -----RVVDFG-----SATFDHEHHSTI---------VSTRHYRAPEVILELGWSQPCDV 236
Query: 339 WSLGAIMYEMLVGYPPFYSDD 359
WS+G I++E VG+ F + D
Sbjct: 237 WSIGCIIFEYYVGFTLFQTHD 257
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSG--NIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
+D +IG G FG+V + KK G A+K++K E S+ E +L ++
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK--EYASKDDHRDFAGELEVLCKL 72
Query: 164 ASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES- 221
H I+ L + + YLYL +EY P G++ A F IA S + S
Sbjct: 73 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA-FAIANSTASTLSS 131
Query: 222 ----------------IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + +IHRD+ N+L+ +N K++DFGL +
Sbjct: 132 QQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 110/280 (39%), Gaps = 62/280 (22%)
Query: 86 KDLERKETEYMRLKRHKIS--VDDFDLLTI------IGRGAFGEVRLCQEKKSGNIYAMK 137
K LE +T + +++ ++FD I +G G FG V + + A+K
Sbjct: 3 KSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVY--KGYVNNTTVAVK 60
Query: 138 KLKKSEMLSRGQV-EHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXX 196
KL ++ ++ + E ++A+ +V+L D + L L+ Y+P G +
Sbjct: 61 KLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR 120
Query: 197 XXXXXXXXXXV--ARFYIAQSVL-AIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLC 253
R IAQ I +H++++IHRDIK N+LLD+ K+SDFGL
Sbjct: 121 LSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLA 180
Query: 254 KPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAY 313
+ + +F ++ R
Sbjct: 181 RASE--------------------------KFAQTVMXSR-------------------- 194
Query: 314 STVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 353
VGT Y+APE L+ + D +S G ++ E++ G P
Sbjct: 195 -IVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 110/280 (39%), Gaps = 62/280 (22%)
Query: 86 KDLERKETEYMRLKRHKIS--VDDFDLLTI------IGRGAFGEVRLCQEKKSGNIYAMK 137
K LE +T + +++ ++FD I +G G FG V + + A+K
Sbjct: 3 KSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVY--KGYVNNTTVAVK 60
Query: 138 KLKKSEMLSRGQV-EHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXX 196
KL ++ ++ + E ++A+ +V+L D + L L+ Y+P G +
Sbjct: 61 KLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR 120
Query: 197 XXXXXXXXXXV--ARFYIAQSVL-AIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLC 253
R IAQ I +H++++IHRDIK N+LLD+ K+SDFGL
Sbjct: 121 LSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLA 180
Query: 254 KPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAY 313
+ + +F ++ R
Sbjct: 181 RASE--------------------------KFAQTVMXXR-------------------- 194
Query: 314 STVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 353
VGT Y+APE L+ + D +S G ++ E++ G P
Sbjct: 195 -IVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 97/249 (38%), Gaps = 56/249 (22%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I D L +G G FG V+ + + ++ A+K +K+ M +E + NL
Sbjct: 20 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSH 78
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-AIE 220
E +V+LY +++I EY+ G + + + V A+E
Sbjct: 79 EK----LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 134
Query: 221 SIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK-PLDCTNLSAIXXXXXXXXXXXXXSM 279
+ ++HRD+ N L++ G +K+SDFGL + LD S+
Sbjct: 135 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSS---------------- 178
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWW 339
V +FP RW SP PEVL+ + + D W
Sbjct: 179 -VGSKFP-----VRW-SP--------------------------PEVLMYSKFSSKSDIW 205
Query: 340 SLGAIMYEM 348
+ G +M+E+
Sbjct: 206 AFGVLMWEI 214
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 99/266 (37%), Gaps = 64/266 (24%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL-LAEVASH-CI 168
L IG GA G V + A+KKL + + Q RA R L L +V +H I
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRP---FQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 169 VKLYYSF------QDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI 222
+ L F ++ + +Y++ME + D + + Q ++ I+ +
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELM---DANLSQVIQMELDHERMSYLLYQMLVGIKHL 142
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
H IHRD+KP N+++ + +K+ DFGL + + +
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYV---------------- 186
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 342
R +++P EV+L GY D WS+G
Sbjct: 187 -------VTRYYRAP---------------------------EVILGMGYKENVDIWSVG 212
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIV 368
IM EM+ G F D + K++
Sbjct: 213 CIMGEMIKGGVLFPGTDHIDQWNKVI 238
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 12/176 (6%)
Query: 85 LKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVR--LCQEKKSGNIYAMKKLKKS 142
D E + + + LKR + + D +L G G FG VR + + +K A+K LK+
Sbjct: 319 FSDPEELKDKKLFLKRDNLLIADIEL----GCGNFGSVRQGVYRMRKKQIDVAIKVLKQG 374
Query: 143 EMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXX--XXXXX 200
+ E + E ++ ++ + IV+L Q AE L L+ME GG +
Sbjct: 375 T--EKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKRE 431
Query: 201 XXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
VA + Q + ++ + + N++HR++ N+LL + K+SDFGL K L
Sbjct: 432 EIPVSNVAEL-LHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKAL 486
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 332 YGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTC----RKIVHWKNHLKFPEEARLTPEAK 387
Y CD WSLG IMY +L GYPPFYS+ + +I + PE + ++ E K
Sbjct: 175 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 234
Query: 388 DLICRLLCDVEHRLGTLGSEQIKAHPWF 415
LI LL + T+ + HPW
Sbjct: 235 MLIRNLLKTEPTQRMTI--TEFMNHPWI 260
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 22/171 (12%)
Query: 96 MRLKRHKISVDDFDLLT-IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
+++K++ I +DD+ + + ++G G G+V K++ +A+K L+ R H R
Sbjct: 8 LQIKKNAI-IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWR 66
Query: 155 AERNLLAEVASHC-----IVKLYYS-FQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA 208
A S C IV +Y + + + L ++ME L GG++
Sbjct: 67 A---------SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 117
Query: 209 RFY-IAQSV-LAIESIHKHNYIHRDIKPDNLLLDQ---NGHMKLSDFGLCK 254
I +S+ AI+ +H N HRD+KP+NLL N +KL+DFG K
Sbjct: 118 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 101/257 (39%), Gaps = 57/257 (22%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I D L +G G FG V+ + + ++ A+K +K+ M +E + NL
Sbjct: 4 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSH 62
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-AIE 220
E +V+LY +++I EY+ G + + + V A+E
Sbjct: 63 EK----LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 118
Query: 221 SIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK-PLDCTNLSAIXXXXXXXXXXXXXSM 279
+ ++HRD+ N L++ G +K+SDFGL + LD S+
Sbjct: 119 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS---------------- 162
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWW 339
V +FP RW SP PEVL+ + + D W
Sbjct: 163 -VGSKFP-----VRW-SP--------------------------PEVLMYSKFSSKSDIW 189
Query: 340 SLGAIMYEML-VGYPPF 355
+ G +M+E+ +G P+
Sbjct: 190 AFGVLMWEIYSLGKMPY 206
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Query: 114 IGRGAFGEVRL-CQEKK---SGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIV 169
+G G FG+V L C + +G + A+K LK + E ++L + I+
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA--GPQHRSGWKQEIDILRTLYHEHII 96
Query: 170 KLYYSFQDA--EYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-AIESIHKHN 226
K +DA L L+MEY+P G + + F AQ + + +H +
Sbjct: 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLF--AQQICEGMAYLHAQH 154
Query: 227 YIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
YIHRD+ N+LLD + +K+ DFGL K
Sbjct: 155 YIHRDLAARNVLLDNDRLVKIGDFGLAK 182
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 101/257 (39%), Gaps = 57/257 (22%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I D L +G G FG V+ + + ++ A+K +K+ M +E + NL
Sbjct: 11 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSH 69
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-AIE 220
E +V+LY +++I EY+ G + + + V A+E
Sbjct: 70 EK----LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 125
Query: 221 SIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK-PLDCTNLSAIXXXXXXXXXXXXXSM 279
+ ++HRD+ N L++ G +K+SDFGL + LD S+
Sbjct: 126 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS---------------- 169
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWW 339
V +FP RW SP PEVL+ + + D W
Sbjct: 170 -VGSKFP-----VRW-SP--------------------------PEVLMYSKFSSKSDIW 196
Query: 340 SLGAIMYEML-VGYPPF 355
+ G +M+E+ +G P+
Sbjct: 197 AFGVLMWEIYSLGKMPY 213
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 97/249 (38%), Gaps = 56/249 (22%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I D L +G G FG V+ + + ++ A+K +K+ M +E + NL
Sbjct: 20 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSH 78
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-AIE 220
E +V+LY +++I EY+ G + + + V A+E
Sbjct: 79 EK----LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 134
Query: 221 SIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK-PLDCTNLSAIXXXXXXXXXXXXXSM 279
+ ++HRD+ N L++ G +K+SDFGL + LD S+
Sbjct: 135 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS---------------- 178
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWW 339
V +FP RW SP PEVL+ + + D W
Sbjct: 179 -VGSKFP-----VRW-SP--------------------------PEVLMYSKFSSKSDIW 205
Query: 340 SLGAIMYEM 348
+ G +M+E+
Sbjct: 206 AFGVLMWEI 214
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I + L +G+G FGEV + + + A+K LK M E E ++
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMK 58
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY--IAQSVLAI 219
++ +V+LY + E + ++ EY+ G + + + AQ +
Sbjct: 59 KLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 117
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSA 263
+ + NY+HRD++ N+L+ +N K++DFGL + ++ +A
Sbjct: 118 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTA 161
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 100/256 (39%), Gaps = 57/256 (22%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE 162
I D L +G G FG V+ + + ++ A+K +K+ M +E + NL E
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHE 59
Query: 163 VASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-AIES 221
+V+LY +++I EY+ G + + + V A+E
Sbjct: 60 K----LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 115
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK-PLDCTNLSAIXXXXXXXXXXXXXSMD 280
+ ++HRD+ N L++ G +K+SDFGL + LD S+
Sbjct: 116 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS----------------- 158
Query: 281 VDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 340
V +FP RW SP PEVL+ + + D W+
Sbjct: 159 VGSKFP-----VRW-SP--------------------------PEVLMYSKFSSKSDIWA 186
Query: 341 LGAIMYEML-VGYPPF 355
G +M+E+ +G P+
Sbjct: 187 FGVLMWEIYSLGKMPY 202
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 101/257 (39%), Gaps = 57/257 (22%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I D L +G G FG V+ + + ++ A+K +K+ M +E + NL
Sbjct: 5 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSH 63
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-AIE 220
E +V+LY +++I EY+ G + + + V A+E
Sbjct: 64 EK----LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 119
Query: 221 SIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK-PLDCTNLSAIXXXXXXXXXXXXXSM 279
+ ++HRD+ N L++ G +K+SDFGL + LD S+
Sbjct: 120 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS---------------- 163
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWW 339
V +FP RW SP PEVL+ + + D W
Sbjct: 164 -VGSKFP-----VRW-SP--------------------------PEVLMYSKFSSKSDIW 190
Query: 340 SLGAIMYEML-VGYPPF 355
+ G +M+E+ +G P+
Sbjct: 191 AFGVLMWEIYSLGKMPY 207
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 9/151 (5%)
Query: 114 IGRGAFGEVRLC----QEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIV 169
+G G FG+V LC + +G A+K LK + ++ E +L + IV
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIV 86
Query: 170 KL--YYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIESIHKHN 226
K + + LIME+LP G + + Y Q ++ +
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ 146
Query: 227 YIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
Y+HRD+ N+L++ +K+ DFGL K ++
Sbjct: 147 YVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 95/244 (38%), Gaps = 54/244 (22%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQV-EHVRAERNLLAEVASHCIVKLY 172
+G G FG V + + A+KKL ++ ++ + E ++A+ +V+L
Sbjct: 33 MGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 90
Query: 173 YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXV--ARFYIAQSVL-AIESIHKHNYIH 229
D + L L+ Y+P G + R IAQ I +H++++IH
Sbjct: 91 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH 150
Query: 230 RDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESG 289
RDIK N+LLD+ K+SDFGL + + +F +
Sbjct: 151 RDIKSANILLDEAFTAKISDFGLARASE--------------------------KFAQXV 184
Query: 290 CGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 349
R VGT Y+APE L+ + D +S G ++ E++
Sbjct: 185 MXXR---------------------IVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEII 222
Query: 350 VGYP 353
G P
Sbjct: 223 TGLP 226
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 103/287 (35%), Gaps = 71/287 (24%)
Query: 107 DFDLLT---IIGRGAFGEVRLCQEKKSGNIYAMKKLK--KSEMLSRGQVEHVRAERNLLA 161
DF LT IIG G FG+V + G+ A+K + E +S+ +E+VR E L A
Sbjct: 5 DFAELTLEEIIGIGGFGKVY--RAFWIGDEVAVKAARHDPDEDISQ-TIENVRQEAKLFA 61
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
+ I+ L L L+ME+ GG + + + + Q +
Sbjct: 62 MLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAV-QIARGMNY 120
Query: 222 IHKHNY---IHRDIKPDNLLLDQ--------NGHMKLSDFGLCKPLDCTNLSAIXXXXXX 270
+H IHRD+K N+L+ Q N +K++DFGL
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL------------------ 162
Query: 271 XXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKK 330
R W R S G ++APEV+
Sbjct: 163 --------------------AREW-------------HRTTKMSAAGAYAWMAPEVIRAS 189
Query: 331 GYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFP 377
+ D WS G +++E+L G PF D + + K L P
Sbjct: 190 MFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIP 236
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 92/261 (35%), Gaps = 80/261 (30%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLK---KSEMLSRGQVEHVRAERNLLAEVASHCI-- 168
IG GA+G V ++ SG+ A+K ++ E L V V R L A + +
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 169 --------------VKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQ 214
V L + D + + + P G + + Q
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-----------LPAETIKDLMRQ 120
Query: 215 SVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXX 274
+ ++ +H + +HRD+KP+N+L+ G +KL+DFG
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFG----------------------- 157
Query: 275 XXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGM 334
L ++ +Q+ + V T Y APEVLL+ Y
Sbjct: 158 -----------------------LARIYSYQMA----LFPVVVTLWYRAPEVLLQSTYAT 190
Query: 335 ECDWWSLGAIMYEMLVGYPPF 355
D WS+G I EM P F
Sbjct: 191 PVDMWSVGCIFAEMFRRKPLF 211
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 96/250 (38%), Gaps = 54/250 (21%)
Query: 113 IIGRGAFGEVRLCQEKKSGN----IYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCI 168
+IG G FGEV K S A+K LK + Q E ++ + + H I
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG--YTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 169 VKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLA-IESIHKHNY 227
++L + + +I EY+ G + + + + + A ++ + NY
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY 168
Query: 228 IHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPE 287
+HRD+ N+L++ N K+SDFGL + L+ D + +
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFGLSRVLED---------------------DPEATYTT 207
Query: 288 SGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 347
SG K P+ + APE + + + D WS G +M+E
Sbjct: 208 SGG----KIPIR---------------------WTAPEAISYRKFTSASDVWSFGIVMWE 242
Query: 348 MLV-GYPPFY 356
++ G P++
Sbjct: 243 VMTYGERPYW 252
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 9/151 (5%)
Query: 114 IGRGAFGEVRLC----QEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIV 169
+G G FG+V LC + +G A+K LK + ++ E +L + IV
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIV 74
Query: 170 KL--YYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIESIHKHN 226
K + + LIME+LP G + + Y Q ++ +
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ 134
Query: 227 YIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
Y+HRD+ N+L++ +K+ DFGL K ++
Sbjct: 135 YVHRDLAARNVLVESEHQVKIGDFGLTKAIE 165
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSG--NIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
+D +IG G FG+V + KK G A+K++K E S+ E +L ++
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK--EYASKDDHRDFAGELEVLCKL 79
Query: 164 ASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES- 221
H I+ L + + YLYL +EY P G++ A F IA S + S
Sbjct: 80 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA-FAIANSTASTLSS 138
Query: 222 ----------------IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + +IHR++ N+L+ +N K++DFGL +
Sbjct: 139 QQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 96/266 (36%), Gaps = 64/266 (24%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL-LAEVASH-CI 168
L IG GA G V + A+KKL + + Q RA R L L +V +H I
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRP---FQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 169 VKLYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI 222
+ L F + L Y++ME + D + + Q + I+ +
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELM---DANLSQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
H IHRD+KP N+++ + +K+ DFGL + + +
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYV---------------- 186
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 342
R +++P EV+L GY D WS+G
Sbjct: 187 -------VTRYYRAP---------------------------EVILGMGYKENVDIWSVG 212
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIV 368
IM EM+ G F D + K++
Sbjct: 213 CIMGEMIKGGVLFPGTDHIDQWNKVI 238
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 108/302 (35%), Gaps = 59/302 (19%)
Query: 94 EYMRLKRHKISVDDFDLLTI--IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVE 151
E + + H + +D+ L I +G G F V L + G+ YA+K++ E R + +
Sbjct: 15 ENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQ 74
Query: 152 HVRAERNLLAEVASHCIVKLYYSFQDAEY-LYLIMEYLPGGDVXXXXXXXXXXXXXVARF 210
L +V + A++ +L++ + G + +
Sbjct: 75 READMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTED 134
Query: 211 YIAQSVLAI----ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXX 266
I +L I E+IH Y HRD+KP N+LL G L D G
Sbjct: 135 QILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLG--------------- 179
Query: 267 XXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEV 326
+ V+G + L LQ W R ++Y APE+
Sbjct: 180 ------SMNQACIHVEGS----------RQALT-LQDWAAQRCTISYR--------APEL 214
Query: 327 LLKKGYGM---ECDWWSLGAIMYEMLVGYPP----FYSDDPVTTCRKIVHWKNHLKFPEE 379
+ + + D WSLG ++Y M+ G P F D V +N L P+
Sbjct: 215 FSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV-----QNQLSIPQS 269
Query: 380 AR 381
R
Sbjct: 270 PR 271
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 6/154 (3%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I D L +G G FG V+ + + ++ A+K +K+ M +E + NL
Sbjct: 5 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSH 63
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-AIE 220
E +V+LY +++I EY+ G + + + V A+E
Sbjct: 64 EK----LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 119
Query: 221 SIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ ++HRD+ N L++ G +K+SDFGL +
Sbjct: 120 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 153
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 93/264 (35%), Gaps = 60/264 (22%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
L +G GA+G V + + A+KKL + S E LL + ++
Sbjct: 25 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRP-FQSLIHARRTYRELRLLKHLKHENVIG 83
Query: 171 LY------YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHK 224
L S +D +YL+ L G D+ V +F + Q + ++ IH
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTT-LMGADLNNIVKCQALSDEHV-QFLVYQLLRGLKYIHS 141
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGR 284
IHRD+KP N+ ++++ +++ DFGL + D +
Sbjct: 142 AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYV-------------------- 181
Query: 285 FPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 344
RW E + +W Y D WS+G I
Sbjct: 182 ------ATRWYRAPEIMLNWM-------------------------HYNQTVDIWSVGCI 210
Query: 345 MYEMLVGYPPFYSDDPVTTCRKIV 368
M E+L G F D + ++I+
Sbjct: 211 MAELLQGKALFPGSDYIDQLKRIM 234
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 107/300 (35%), Gaps = 81/300 (27%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQ-------EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
D L +G GAFG+V + + + K A+K LK + + + +E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEME 92
Query: 159 LLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGG------------------DVXXXXXX 199
++ + H I+ L + LY+I+EY G D+
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEE 152
Query: 200 XXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCT 259
V+ Y Q +E + IHRD+ N+L+ +N MK++DFGL + D
Sbjct: 153 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DIN 208
Query: 260 NLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTP 319
N+ +GR P +W
Sbjct: 209 NIDXXKKT-------------TNGRLP-----VKW------------------------- 225
Query: 320 DYIAPEVLLKKGYGMECDWWSLGAIMYEM--LVGYPPFYSDDPVTTCRKIVHWKNHLKFP 377
+APE L + Y + D WS G +M+E+ L G P Y PV K++ + + P
Sbjct: 226 --MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKLLKEGHRMDKP 281
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 96/266 (36%), Gaps = 64/266 (24%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL-LAEVASH-CI 168
L IG GA G V + G A+KKL + + Q RA R L L + +H I
Sbjct: 27 LKPIGSGAQGIVCAAFDTVLGINVAVKKLSRP---FQNQTHAKRAYRELVLLKCVNHKNI 83
Query: 169 VKLYYSFQDAEYL------YLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI 222
+ L F + L YL+ME + D + + Q + I+ +
Sbjct: 84 ISLLNVFTPQKTLEEFQDVYLVMELM---DANLCQVIHMELDHERMSYLLYQMLCGIKHL 140
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
H IHRD+KP N+++ + +K+ DFGL + + +
Sbjct: 141 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------------------TASTN 177
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 342
R +++P EV+L GY D WS+G
Sbjct: 178 FMMTPYVVTRYYRAP---------------------------EVILGMGYKENVDIWSVG 210
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIV 368
IM E++ G F D + K++
Sbjct: 211 CIMGELVKGSVIFQGTDHIDQWNKVI 236
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 107/300 (35%), Gaps = 81/300 (27%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQ-------EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
D L +G GAFG+V + + + K A+K LK + + + +E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEME 92
Query: 159 LLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGG------------------DVXXXXXX 199
++ + H I+ L + LY+I+EY G D+
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 200 XXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCT 259
V+ Y Q +E + IHRD+ N+L+ +N MK++DFGL + D
Sbjct: 153 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DIN 208
Query: 260 NLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTP 319
N+ +GR P +W
Sbjct: 209 NIDXXKKT-------------TNGRLP-----VKW------------------------- 225
Query: 320 DYIAPEVLLKKGYGMECDWWSLGAIMYEM--LVGYPPFYSDDPVTTCRKIVHWKNHLKFP 377
+APE L + Y + D WS G +M+E+ L G P Y PV K++ + + P
Sbjct: 226 --MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKLLKEGHRMDKP 281
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 98/248 (39%), Gaps = 60/248 (24%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG G+FG V + K G++ A+K L + + Q++ + E +L + H + L+
Sbjct: 16 IGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRK-TRHVNILLFM 70
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIA-QSVLAIESIHKHNYIHRDI 232
+ A L ++ ++ G + + IA Q+ ++ +H + IHRD+
Sbjct: 71 GYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 130
Query: 233 KPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGR 292
K +N+ L ++ +K+ DFGL
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLAT-----------------------------------VKS 155
Query: 293 RWKSP--LEQLQHWQINRRKLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYE 347
RW EQL G+ ++APEV+ K Y + D ++ G ++YE
Sbjct: 156 RWSGSHQFEQLS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE 201
Query: 348 MLVGYPPF 355
++ G P+
Sbjct: 202 LMTGQLPY 209
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 119/311 (38%), Gaps = 61/311 (19%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVE-HVRAERNLLAEVASHCIVKL 171
++G G++G+V+ + ++ A+K LKK ++ E +V+ E LL + +++L
Sbjct: 12 LLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQL 71
Query: 172 YYSF--QDAEYLYLIMEY-LPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYI 228
++ + +Y++MEY + G A Y Q + +E +H +
Sbjct: 72 VDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIV 131
Query: 229 HRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPES 288
H+DIKP NLLL G +K+S G+
Sbjct: 132 HKDIKPGNLLLTTGGTLKISALGVA----------------------------------- 156
Query: 289 GCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVL--LKKGYGMECDWWSLGAIMY 346
E L + + ++ G+P + PE+ L G + D WS G +Y
Sbjct: 157 ----------EALHPFAAD--DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLY 204
Query: 347 EMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLGS 406
+ G PF D+ I K P + P DL+ +L E+ S
Sbjct: 205 NITTGLYPFEGDNIYKLFENI--GKGSYAIPGDC--GPPLSDLLKGML---EYEPAKRFS 257
Query: 407 -EQIKAHPWFK 416
QI+ H WF+
Sbjct: 258 IRQIRQHSWFR 268
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 100/259 (38%), Gaps = 56/259 (21%)
Query: 113 IIGRGAFGEVRLCQEKKSGNIYAMKKL-KKSEMLSRGQVEHV------RAERNLLAEVAS 165
++ G F V Q+ SG YA+K+L E +R ++ V N++ ++
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXX----XXXXXVARFYIAQSVLAIES 221
I K AE+L L+ E G V + FY Q+ A++
Sbjct: 95 ASIGKEESDTGQAEFL-LLTELCKGQLVEFLKKMESRGPLSCDTVLKIFY--QTCRAVQH 151
Query: 222 IHKHN--YIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
+H+ IHRD+K +NLLL G +KL DFG T +S
Sbjct: 152 MHRQKPPIIHRDLKVENLLLSNQGTIKLCDFG-----SATTIS----------------- 189
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVL-LKKGY--GMEC 336
+P+ W + L +I R TP Y PE++ L + G +
Sbjct: 190 ----HYPDYS----WSAQRRALVEEEITRNT-------TPMYRTPEIIDLYSNFPIGEKQ 234
Query: 337 DWWSLGAIMYEMLVGYPPF 355
D W+LG I+Y + PF
Sbjct: 235 DIWALGCILYLLCFRQHPF 253
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 103/260 (39%), Gaps = 60/260 (23%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
+I + L T IG G+FG V + K G++ A+K LK + E +A RN +A
Sbjct: 32 EIEASEVMLSTRIGSGSFGTV--YKGKWHGDV-AVKILKVVDPTP----EQFQAFRNEVA 84
Query: 162 EV--ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIA-QSVLA 218
+ H + L+ + + L ++ ++ G + IA Q+
Sbjct: 85 VLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQG 144
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXS 278
++ +H N IHRD+K +N+ L + +K+ DFGL
Sbjct: 145 MDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLAT------------------------ 180
Query: 279 MDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKG---YGME 335
RW S +Q++ G+ ++APEV+ + + +
Sbjct: 181 -----------VKSRW-SGSQQVEQ-----------PTGSVLWMAPEVIRMQDNNPFSFQ 217
Query: 336 CDWWSLGAIMYEMLVGYPPF 355
D +S G ++YE++ G P+
Sbjct: 218 SDVYSYGIVLYELMTGELPY 237
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 107 DFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH 166
+F L IG G FG V C ++ G IYA+K+ KK G V+ E+N L EV +H
Sbjct: 12 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA---GSVD----EQNALREVYAH 64
Query: 167 C-------IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-- 217
+V+ + ++ + +++ + EY GG + + +L
Sbjct: 65 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 124
Query: 218 --AIESIHKHNYIHRDIKPDNLLLDQN 242
+ IH + +H DIKP N+ + +
Sbjct: 125 GRGLRYIHSMSLVHMDIKPSNIFISRT 151
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 107 DFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH 166
+F L IG G FG V C ++ G IYA+K+ KK G V+ E+N L EV +H
Sbjct: 10 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA---GSVD----EQNALREVYAH 62
Query: 167 C-------IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-- 217
+V+ + ++ + +++ + EY GG + + +L
Sbjct: 63 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 122
Query: 218 --AIESIHKHNYIHRDIKPDNLLLDQN 242
+ IH + +H DIKP N+ + +
Sbjct: 123 GRGLRYIHSMSLVHMDIKPSNIFISRT 149
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 107 DFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH 166
+F L IG G FG V C ++ G IYA+K+ KK G V+ E+N L EV +H
Sbjct: 10 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA---GSVD----EQNALREVYAH 62
Query: 167 C-------IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-- 217
+V+ + ++ + +++ + EY GG + + +L
Sbjct: 63 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 122
Query: 218 --AIESIHKHNYIHRDIKPDNLLLDQN 242
+ IH + +H DIKP N+ + +
Sbjct: 123 GRGLRYIHSMSLVHMDIKPSNIFISRT 149
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 13/162 (8%)
Query: 95 YMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
+M LKR +I+ LL +G G FG V+L + K ++ A+K +K+ M + E +
Sbjct: 2 HMELKREEIT-----LLKELGSGQFGVVKLGKWKGQYDV-AVKMIKEGSM---SEDEFFQ 52
Query: 155 AERNLLAEVASHCIVKLYYSFQDAEY-LYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIA 213
+ ++ SH + +Y EY +Y++ EY+ G + +
Sbjct: 53 EAQTMMK--LSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMC 110
Query: 214 QSVL-AIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
V + + H +IHRD+ N L+D++ +K+SDFG+ +
Sbjct: 111 YDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTR 152
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 107 DFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH 166
+F L IG G FG V C ++ G IYA+K+ KK G V+ E+N L EV +H
Sbjct: 8 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA---GSVD----EQNALREVYAH 60
Query: 167 C-------IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-- 217
+V+ + ++ + +++ + EY GG + + +L
Sbjct: 61 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 120
Query: 218 --AIESIHKHNYIHRDIKPDNLLLDQN 242
+ IH + +H DIKP N+ + +
Sbjct: 121 GRGLRYIHSMSLVHMDIKPSNIFISRT 147
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 102/261 (39%), Gaps = 53/261 (20%)
Query: 102 KISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
++ DD + + +GRGA+G V + SG I A+K+++ + ++ + + + + ++
Sbjct: 30 EVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRAT--VNSQEQKRLLXDLDISX 87
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY---IAQSVL- 217
+Y E I L + + IA S++
Sbjct: 88 RTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVK 147
Query: 218 AIESIH-KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXX 276
A+E +H K + IHRD+KP N+L++ G +K DFG+ L
Sbjct: 148 ALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYL-----------------VDD 190
Query: 277 XSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMEC 336
+ D+D +GC P+ I PE L +KGY ++
Sbjct: 191 VAKDID-----AGC-----------------------KPYXAPERINPE-LNQKGYSVKS 221
Query: 337 DWWSLGAIMYEMLVGYPPFYS 357
D WSLG E+ + P+ S
Sbjct: 222 DIWSLGITXIELAILRFPYDS 242
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 99/277 (35%), Gaps = 78/277 (28%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQ-------EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
D L +G GAFG+V + + + K A+K LK + + + +E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEME 92
Query: 159 LLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGG------------------DVXXXXXX 199
++ + H I+ L + LY+I+EY G D+
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 200 XXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCT 259
V+ Y Q +E + IHRD+ N+L+ +N MK++DFGL + D
Sbjct: 153 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DIN 208
Query: 260 NLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTP 319
N+ +GR P +W
Sbjct: 209 NIDYYKNT-------------TNGRLP-----VKW------------------------- 225
Query: 320 DYIAPEVLLKKGYGMECDWWSLGAIMYEML-VGYPPF 355
+APE L + Y + D WS G +M+E+ +G P+
Sbjct: 226 --MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 93/257 (36%), Gaps = 53/257 (20%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL----- 159
V ++ L IG+G FGEV + +K+G A+KK+ + +R + L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 160 --LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL 217
+ + C K + +YL+ ++ + + +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 136
Query: 218 AIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXX 277
+ IH++ +HRD+K N+L+ ++G +KL+DFGL + S
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS--------------- 181
Query: 278 SMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMEC 336
Q NR + V T Y PE+LL ++ YG
Sbjct: 182 ---------------------------QPNRYX---NRVVTLWYRPPELLLGERDYGPPI 211
Query: 337 DWWSLGAIMYEMLVGYP 353
D W G IM EM P
Sbjct: 212 DLWGAGCIMAEMWTRSP 228
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 93/257 (36%), Gaps = 53/257 (20%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL----- 159
V ++ L IG+G FGEV + +K+G A+KK+ + +R + L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 160 --LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL 217
+ + C K + +YL+ ++ + + +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 136
Query: 218 AIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXX 277
+ IH++ +HRD+K N+L+ ++G +KL+DFGL + S
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS--------------- 181
Query: 278 SMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMEC 336
Q NR + V T Y PE+LL ++ YG
Sbjct: 182 ---------------------------QPNRYX---NRVVTLWYRPPELLLGERDYGPPI 211
Query: 337 DWWSLGAIMYEMLVGYP 353
D W G IM EM P
Sbjct: 212 DLWGAGCIMAEMWTRSP 228
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 99/277 (35%), Gaps = 78/277 (28%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQ-------EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
D L +G GAFG+V + + + K A+K LK + + + +E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEME 92
Query: 159 LLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGG------------------DVXXXXXX 199
++ + H I+ L + LY+I+EY G D+
Sbjct: 93 MMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 200 XXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCT 259
V+ Y Q +E + IHRD+ N+L+ +N MK++DFGL + D
Sbjct: 153 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DIN 208
Query: 260 NLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTP 319
N+ +GR P +W
Sbjct: 209 NIDYYKKT-------------TNGRLP-----VKW------------------------- 225
Query: 320 DYIAPEVLLKKGYGMECDWWSLGAIMYEML-VGYPPF 355
+APE L + Y + D WS G +M+E+ +G P+
Sbjct: 226 --MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 108/294 (36%), Gaps = 71/294 (24%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + A+KKL +
Sbjct: 8 NNFYSVEIGDSTFTVLKRYQN-------LKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 143 EMLSRGQVEHVRAERNL-LAEVASH-CIVKLYYSFQDAEYL------YLIMEYLPGGDVX 194
+ Q RA R L L + +H I+ L F + L Y++ME + D
Sbjct: 61 ---FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM---DAN 114
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 255 PLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYS 314
+ + PE R +++P
Sbjct: 175 TAGTSFMMT----------------------PEV-VTRYYRAP----------------- 194
Query: 315 TVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIV 368
EV+L GY D WS+G IM EM+ G F D + K++
Sbjct: 195 ----------EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI 238
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 104/298 (34%), Gaps = 77/298 (25%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQ-------EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
D L +G GAFG+V + + + K A+K LK + + + +E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEEDLSDLVSEME 92
Query: 159 LLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGG------------------DVXXXXXX 199
++ + H I+ L + LY+I+EY G D+
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 200 XXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCT 259
V+ Y Q +E + IHRD+ N+L+ +N MK++DFGL + D
Sbjct: 153 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DIN 208
Query: 260 NLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTP 319
N+ +GR P +W
Sbjct: 209 NIDYYKKT-------------TNGRLP-----VKW------------------------- 225
Query: 320 DYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFP 377
+APE L + Y + D WS G +M+E+ Y PV K++ + + P
Sbjct: 226 --MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 281
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Query: 114 IGRGAFGEVRL-CQEKK---SGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIV 169
+G G FG+V L C + +G + A+K LK + E ++L + I+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--CGPQHRSGWKQEIDILRTLYHEHII 79
Query: 170 KLYYSFQDA--EYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-AIESIHKHN 226
K +D + L L+MEY+P G + + F AQ + + +H +
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLF--AQQICEGMAYLHSQH 137
Query: 227 YIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
YIHR++ N+LLD + +K+ DFGL K
Sbjct: 138 YIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 114 IGRGAFGEVRL-CQEKK---SGNIYAMKKLKKS--EMLSRGQVEHVRAERNLLAEVASHC 167
+G G FG+V L C + +G + A+K LK+ L G + R L E
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEH---- 71
Query: 168 IVKLYYSFQDA--EYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-AIESIHK 224
IVK +D + + L+MEY+P G + + F AQ + + +H
Sbjct: 72 IVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLF--AQQICEGMAYLHA 129
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+YIHR + N+LLD + +K+ DFGL K +
Sbjct: 130 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAV 161
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 114 IGRGAFGEVRL-CQEKK---SGNIYAMKKLKKS--EMLSRGQVEHVRAERNLLAEVASHC 167
+G G FG+V L C + +G + A+K LK+ L G + R L E
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEH---- 72
Query: 168 IVKLYYSFQDA--EYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-AIESIHK 224
IVK +D + + L+MEY+P G + + F AQ + + +H
Sbjct: 73 IVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLF--AQQICEGMAYLHA 130
Query: 225 HNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+YIHR + N+LLD + +K+ DFGL K +
Sbjct: 131 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAV 162
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 99/277 (35%), Gaps = 78/277 (28%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQ-------EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
D L +G GAFG+V + + + K A+K LK + + + +E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEME 92
Query: 159 LLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGG------------------DVXXXXXX 199
++ + H I+ L + LY+I+EY G D+
Sbjct: 93 MMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 200 XXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCT 259
V+ Y Q +E + IHRD+ N+L+ +N MK++DFGL + D
Sbjct: 153 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DIN 208
Query: 260 NLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTP 319
N+ +GR P +W
Sbjct: 209 NIDYYKKT-------------TNGRLP-----VKW------------------------- 225
Query: 320 DYIAPEVLLKKGYGMECDWWSLGAIMYEML-VGYPPF 355
+APE L + Y + D WS G +M+E+ +G P+
Sbjct: 226 --MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Query: 114 IGRGAFGEVRL-CQEKK---SGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIV 169
+G G FG+V L C + +G + A+K LK + E ++L + I+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--CGPQHRSGWKQEIDILRTLYHEHII 79
Query: 170 KLYYSFQDA--EYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-AIESIHKHN 226
K +D + L L+MEY+P G + + F AQ + + +H +
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLF--AQQICEGMAYLHAQH 137
Query: 227 YIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
YIHR++ N+LLD + +K+ DFGL K
Sbjct: 138 YIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 93/257 (36%), Gaps = 53/257 (20%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL----- 159
V ++ L IG+G FGEV + +K+G A+KK+ + +R + L
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 160 --LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL 217
+ + C K + +YL+ ++ + + +
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 135
Query: 218 AIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXX 277
+ IH++ +HRD+K N+L+ ++G +KL+DFGL + S
Sbjct: 136 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS--------------- 180
Query: 278 SMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMEC 336
Q NR + V T Y PE+LL ++ YG
Sbjct: 181 ---------------------------QPNRYX---NRVVTLWYRPPELLLGERDYGPPI 210
Query: 337 DWWSLGAIMYEMLVGYP 353
D W G IM EM P
Sbjct: 211 DLWGAGCIMAEMWTRSP 227
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 93/257 (36%), Gaps = 53/257 (20%)
Query: 105 VDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL----- 159
V ++ L IG+G FGEV + +K+G A+KK+ + +R + L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 160 --LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL 217
+ + C K + +YL+ ++ + + +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 136
Query: 218 AIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXX 277
+ IH++ +HRD+K N+L+ ++G +KL+DFGL + S
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS--------------- 181
Query: 278 SMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL-KKGYGMEC 336
Q NR + V T Y PE+LL ++ YG
Sbjct: 182 ---------------------------QPNRYX---NRVVTLWYRPPELLLGERDYGPPI 211
Query: 337 DWWSLGAIMYEMLVGYP 353
D W G IM EM P
Sbjct: 212 DLWGAGCIMAEMWTRSP 228
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 97/248 (39%), Gaps = 60/248 (24%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG G+FG V + K G++ A+K L + + Q++ + E +L + H + L+
Sbjct: 43 IGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRK-TRHVNILLFM 97
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIA-QSVLAIESIHKHNYIHRDI 232
+ L ++ ++ G + + IA Q+ ++ +H + IHRD+
Sbjct: 98 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 157
Query: 233 KPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGR 292
K +N+ L ++ +K+ DFGL
Sbjct: 158 KSNNIFLHEDLTVKIGDFGLAT-----------------------------------VKS 182
Query: 293 RWKSP--LEQLQHWQINRRKLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYE 347
RW EQL G+ ++APEV+ K Y + D ++ G ++YE
Sbjct: 183 RWSGSHQFEQLS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE 228
Query: 348 MLVGYPPF 355
++ G P+
Sbjct: 229 LMTGQLPY 236
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 108/289 (37%), Gaps = 59/289 (20%)
Query: 107 DFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH 166
D ++ IG G+FG V + + G+ A+K L + + + E +R E ++ +
Sbjct: 38 DLNIKEKIGAGSFGTVH--RAEWHGSDVAVKILMEQDFHAERVNEFLR-EVAIMKRLRHP 94
Query: 167 CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQS---VLAIESIH 223
IV + L ++ EYL G + R ++ + + +H
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 224 KHN--YIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
N +HR++K NLL+D+ +K+ DFGL + T LS
Sbjct: 155 NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS------------------- 195
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 341
+ S GTP+++APEVL + + D +S
Sbjct: 196 ------------------------------SKSAAGTPEWMAPEVLRDEPSNEKSDVYSF 225
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLI 390
G I++E+ P+ + +P + L+ P L P+ +I
Sbjct: 226 GVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRN--LNPQVAAII 272
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 97/248 (39%), Gaps = 60/248 (24%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG G+FG V + K G++ A+K L + + Q++ + E +L + H + L+
Sbjct: 44 IGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRK-TRHVNILLFM 98
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIA-QSVLAIESIHKHNYIHRDI 232
+ L ++ ++ G + + IA Q+ ++ +H + IHRD+
Sbjct: 99 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 158
Query: 233 KPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGR 292
K +N+ L ++ +K+ DFGL
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLAT-----------------------------------VKS 183
Query: 293 RWKSP--LEQLQHWQINRRKLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYE 347
RW EQL G+ ++APEV+ K Y + D ++ G ++YE
Sbjct: 184 RWSGSHQFEQLS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE 229
Query: 348 MLVGYPPF 355
++ G P+
Sbjct: 230 LMTGQLPY 237
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 100/263 (38%), Gaps = 69/263 (26%)
Query: 110 LLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIV 169
L I+G+GA V + KK+G+++A+K L V+ E +L ++ IV
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLNHKNIV 70
Query: 170 KLYYSFQDA--EYLYLIMEYLPGGDVXXXXXXXXXXXXXV-ARFYIA--QSVLAIESIHK 224
KL+ ++ + LIME+ P G + + F I V + + +
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 225 HNYIHRDIKPDNLL--LDQNGH--MKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMD 280
+ +HR+IKP N++ + ++G KL+DFG + L +
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL-----------------------E 167
Query: 281 VDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPE-----VLLK---KGY 332
D +F S GT +Y+ P+ VL K K Y
Sbjct: 168 DDEQF---------------------------VSLYGTEEYLHPDMYERAVLRKDHQKKY 200
Query: 333 GMECDWWSLGAIMYEMLVGYPPF 355
G D WS+G Y G PF
Sbjct: 201 GATVDLWSIGVTFYHAATGSLPF 223
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 97/248 (39%), Gaps = 60/248 (24%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG G+FG V + K G++ A+K L + + Q++ + E +L + H + L+
Sbjct: 21 IGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRK-TRHVNILLFM 75
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIA-QSVLAIESIHKHNYIHRDI 232
+ L ++ ++ G + + IA Q+ ++ +H + IHRD+
Sbjct: 76 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 135
Query: 233 KPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGR 292
K +N+ L ++ +K+ DFGL
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLAT-----------------------------------VKS 160
Query: 293 RWKSP--LEQLQHWQINRRKLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYE 347
RW EQL G+ ++APEV+ K Y + D ++ G ++YE
Sbjct: 161 RWSGSHQFEQLS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE 206
Query: 348 MLVGYPPF 355
++ G P+
Sbjct: 207 LMTGQLPY 214
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 97/248 (39%), Gaps = 60/248 (24%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG G+FG V + K G++ A+K L + + Q++ + E +L + H + L+
Sbjct: 18 IGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRK-TRHVNILLFM 72
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIA-QSVLAIESIHKHNYIHRDI 232
+ L ++ ++ G + + IA Q+ ++ +H + IHRD+
Sbjct: 73 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 132
Query: 233 KPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGR 292
K +N+ L ++ +K+ DFGL
Sbjct: 133 KSNNIFLHEDLTVKIGDFGLAT-----------------------------------VKS 157
Query: 293 RWKSP--LEQLQHWQINRRKLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYE 347
RW EQL G+ ++APEV+ K Y + D ++ G ++YE
Sbjct: 158 RWSGSHQFEQLS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE 203
Query: 348 MLVGYPPF 355
++ G P+
Sbjct: 204 LMTGQLPY 211
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 99/277 (35%), Gaps = 78/277 (28%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQ-------EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
D L +G GAFG+V + + + K A+K LK + + + +E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEME 92
Query: 159 LLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGG------------------DVXXXXXX 199
++ + H I+ L + LY+I+EY G D+
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 200 XXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCT 259
V+ Y Q +E + IHRD+ N+L+ +N M+++DFGL + D
Sbjct: 153 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLAR--DIN 208
Query: 260 NLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTP 319
N+ +GR P +W
Sbjct: 209 NIDYYKKT-------------TNGRLP-----VKW------------------------- 225
Query: 320 DYIAPEVLLKKGYGMECDWWSLGAIMYEML-VGYPPF 355
+APE L + Y + D WS G +M+E+ +G P+
Sbjct: 226 --MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 97/248 (39%), Gaps = 60/248 (24%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG G+FG V + K G++ A+K L + + Q++ + E +L + H + L+
Sbjct: 21 IGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRK-TRHVNILLFM 75
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIA-QSVLAIESIHKHNYIHRDI 232
+ L ++ ++ G + + IA Q+ ++ +H + IHRD+
Sbjct: 76 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 135
Query: 233 KPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGR 292
K +N+ L ++ +K+ DFGL
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLAT-----------------------------------VKS 160
Query: 293 RWKSP--LEQLQHWQINRRKLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYE 347
RW EQL G+ ++APEV+ K Y + D ++ G ++YE
Sbjct: 161 RWSGSHQFEQLS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE 206
Query: 348 MLVGYPPF 355
++ G P+
Sbjct: 207 LMTGQLPY 214
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 97/248 (39%), Gaps = 60/248 (24%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG G+FG V + K G++ A+K L + + Q++ + E +L + H + L+
Sbjct: 16 IGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRK-TRHVNILLFM 70
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIA-QSVLAIESIHKHNYIHRDI 232
+ L ++ ++ G + + IA Q+ ++ +H + IHRD+
Sbjct: 71 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 130
Query: 233 KPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGR 292
K +N+ L ++ +K+ DFGL
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLAT-----------------------------------VKS 155
Query: 293 RWKSP--LEQLQHWQINRRKLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYE 347
RW EQL G+ ++APEV+ K Y + D ++ G ++YE
Sbjct: 156 RWSGSHQFEQLS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE 201
Query: 348 MLVGYPPF 355
++ G P+
Sbjct: 202 LMTGQLPY 209
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 91/243 (37%), Gaps = 54/243 (22%)
Query: 115 GRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQV-EHVRAERNLLAEVASHCIVKLYY 173
G G FG V + + A+KKL ++ ++ + E + A+ +V+L
Sbjct: 31 GEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLG 88
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXV--ARFYIAQSVL-AIESIHKHNYIHR 230
D + L L+ Y P G + R IAQ I +H++++IHR
Sbjct: 89 FSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHR 148
Query: 231 DIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGC 290
DIK N+LLD+ K+SDFGL + + +F +
Sbjct: 149 DIKSANILLDEAFTAKISDFGLARASE--------------------------KFAQXVX 182
Query: 291 GRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 350
R VGT Y APE L+ + D +S G ++ E++
Sbjct: 183 XSR---------------------IVGTTAYXAPEA-LRGEITPKSDIYSFGVVLLEIIT 220
Query: 351 GYP 353
G P
Sbjct: 221 GLP 223
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 100/275 (36%), Gaps = 74/275 (26%)
Query: 114 IGRGAFGEVRLCQ-----EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCI 168
+G GAFG+V L + K + A+K LK + +R + E LL + I
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQR---EAELLTNLQHEHI 79
Query: 169 VKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA---------------RFYIA 213
VK Y D + L ++ EY+ GD+ + +IA
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 214 QSVLA-IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXX 272
+ + + + +++HRD+ N L+ N +K+ DFG+ + + T+ +
Sbjct: 140 SQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRV-------- 191
Query: 273 XXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGY 332
G P+ ++ PE ++ + +
Sbjct: 192 ------------------GGHTMLPIR---------------------WMPPESIMYRKF 212
Query: 333 GMECDWWSLGAIMYEMLV-GYPPFY--SDDPVTTC 364
E D WS G I++E+ G P++ S+ V C
Sbjct: 213 TTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIEC 247
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 97/248 (39%), Gaps = 60/248 (24%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG G+FG V + K G++ A+K L + + Q++ + E +L + H + L+
Sbjct: 32 IGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRKT-RHVNILLFM 86
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIA-QSVLAIESIHKHNYIHRDI 232
+ A L ++ ++ G + IA Q+ ++ +H + IHRD+
Sbjct: 87 GYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDL 146
Query: 233 KPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGR 292
K +N+ L ++ +K+ DFGL
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKS----------------------------------- 171
Query: 293 RWKSP--LEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKG---YGMECDWWSLGAIMYE 347
RW EQL G+ ++APEV+ + Y + D ++ G ++YE
Sbjct: 172 RWSGSHQFEQLS--------------GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYE 217
Query: 348 MLVGYPPF 355
++ G P+
Sbjct: 218 LMTGQLPY 225
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 97/277 (35%), Gaps = 78/277 (28%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQ-------EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
D L +G G FG+V + + + K A+K LK + + + +E
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEME 138
Query: 159 LLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGG------------------DVXXXXXX 199
++ + H I+ L + LY+I+EY G D+
Sbjct: 139 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 198
Query: 200 XXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCT 259
V+ Y Q +E + IHRD+ N+L+ +N MK++DFGL + D
Sbjct: 199 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DIN 254
Query: 260 NLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTP 319
N+ +GR P
Sbjct: 255 NIDYYKKT-------------TNGRLPVK------------------------------- 270
Query: 320 DYIAPEVLLKKGYGMECDWWSLGAIMYEML-VGYPPF 355
++APE L + Y + D WS G +M+E+ +G P+
Sbjct: 271 -WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 306
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 97/248 (39%), Gaps = 60/248 (24%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG G+FG V + K G++ A+K L + + Q++ + E +L + H + L+
Sbjct: 36 IGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRK-TRHVNILLFM 90
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIA-QSVLAIESIHKHNYIHRDI 232
+ L ++ ++ G + + IA Q+ ++ +H + IHRD+
Sbjct: 91 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 150
Query: 233 KPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGR 292
K +N+ L ++ +K+ DFGL
Sbjct: 151 KSNNIFLHEDLTVKIGDFGLATE-----------------------------------KS 175
Query: 293 RWKSP--LEQLQHWQINRRKLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYE 347
RW EQL G+ ++APEV+ K Y + D ++ G ++YE
Sbjct: 176 RWSGSHQFEQLS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE 221
Query: 348 MLVGYPPF 355
++ G P+
Sbjct: 222 LMTGQLPY 229
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 93 TEYMRLKRHKISVDDFDLLTIIGRGAFGEV---RLCQEKKSGNIYAMKKLKKSEMLSRGQ 149
E +R +I V + +IG G FGEV RL K + A+K LK + Q
Sbjct: 3 NEAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGG--YTERQ 60
Query: 150 VEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR 209
+E +++ + I++L ++ + ++ E++ G + +
Sbjct: 61 RREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL 120
Query: 210 FYIAQSVLA-IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
+ + + + + + + +Y+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 121 VGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 169
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 97/248 (39%), Gaps = 60/248 (24%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG G+FG V + K G++ A+K L + + Q++ + E +L + H + L+
Sbjct: 44 IGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRK-TRHVNILLFM 98
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIA-QSVLAIESIHKHNYIHRDI 232
+ L ++ ++ G + + IA Q+ ++ +H + IHRD+
Sbjct: 99 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 158
Query: 233 KPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGR 292
K +N+ L ++ +K+ DFGL
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATE-----------------------------------KS 183
Query: 293 RWKSP--LEQLQHWQINRRKLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYE 347
RW EQL G+ ++APEV+ K Y + D ++ G ++YE
Sbjct: 184 RWSGSHQFEQLS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE 229
Query: 348 MLVGYPPF 355
++ G P+
Sbjct: 230 LMTGQLPY 237
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 98/277 (35%), Gaps = 78/277 (28%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQ-------EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
D L +G G FG+V + + + K A+K LK + + + +E
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEME 81
Query: 159 LLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGG------------------DVXXXXXX 199
++ + H I+ L + LY+I+EY G D+
Sbjct: 82 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 141
Query: 200 XXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCT 259
V+ Y Q +E + IHRD+ N+L+ +N MK++DFGL + D
Sbjct: 142 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DIN 197
Query: 260 NLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTP 319
N+ +GR P +W
Sbjct: 198 NIDYYKKT-------------TNGRLP-----VKW------------------------- 214
Query: 320 DYIAPEVLLKKGYGMECDWWSLGAIMYEML-VGYPPF 355
+APE L + Y + D WS G +M+E+ +G P+
Sbjct: 215 --MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 249
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 98/277 (35%), Gaps = 78/277 (28%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQ-------EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
D L +G G FG+V + + + K A+K LK + + + +E
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEME 79
Query: 159 LLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGG------------------DVXXXXXX 199
++ + H I+ L + LY+I+EY G D+
Sbjct: 80 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 139
Query: 200 XXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCT 259
V+ Y Q +E + IHRD+ N+L+ +N MK++DFGL + D
Sbjct: 140 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLAR--DIN 195
Query: 260 NLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTP 319
N+ +GR P +W
Sbjct: 196 NIDYYKKT-------------TNGRLP-----VKW------------------------- 212
Query: 320 DYIAPEVLLKKGYGMECDWWSLGAIMYEML-VGYPPF 355
+APE L + Y + D WS G +M+E+ +G P+
Sbjct: 213 --MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 247
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 72/196 (36%), Gaps = 55/196 (28%)
Query: 179 EYLYLIMEYLPGG---DVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPD 235
+YL +IMEY+P + + YI Q A+ IH HRDIKP
Sbjct: 111 KYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQ 170
Query: 236 NLLLD-QNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRW 294
NLL++ ++ +KL DFG K L + S C R +
Sbjct: 171 NLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXI-----------------------CSRFY 207
Query: 295 KSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKG-YGMECDWWSLGAIMYEMLVGYP 353
+ APE++L Y D WS+G + E+++G P
Sbjct: 208 R---------------------------APELMLGATEYTPSIDLWSIGCVFGELILGKP 240
Query: 354 PFYSDDPVTTCRKIVH 369
F + + +I+
Sbjct: 241 LFSGETSIDQLVRIIQ 256
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 98/277 (35%), Gaps = 78/277 (28%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQ-------EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
D L +G G FG+V + + + K A+K LK + + + +E
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEME 84
Query: 159 LLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGG------------------DVXXXXXX 199
++ + H I+ L + LY+I+EY G D+
Sbjct: 85 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 144
Query: 200 XXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCT 259
V+ Y Q +E + IHRD+ N+L+ +N MK++DFGL + D
Sbjct: 145 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DIN 200
Query: 260 NLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTP 319
N+ +GR P +W
Sbjct: 201 NIDYYKKT-------------TNGRLP-----VKW------------------------- 217
Query: 320 DYIAPEVLLKKGYGMECDWWSLGAIMYEML-VGYPPF 355
+APE L + Y + D WS G +M+E+ +G P+
Sbjct: 218 --MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 252
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 97/248 (39%), Gaps = 60/248 (24%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG G+FG V + K G++ A+K L + + Q++ + E +L + H + L+
Sbjct: 16 IGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRK-TRHVNILLFM 70
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIA-QSVLAIESIHKHNYIHRDI 232
+ L ++ ++ G + + IA Q+ ++ +H + IHRD+
Sbjct: 71 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 130
Query: 233 KPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGR 292
K +N+ L ++ +K+ DFGL
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATE-----------------------------------KS 155
Query: 293 RWKSP--LEQLQHWQINRRKLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYE 347
RW EQL G+ ++APEV+ K Y + D ++ G ++YE
Sbjct: 156 RWSGSHQFEQLS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE 201
Query: 348 MLVGYPPF 355
++ G P+
Sbjct: 202 LMTGQLPY 209
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 98/277 (35%), Gaps = 78/277 (28%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQ-------EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
D L +G GAFG+V + + + K A+K LK + + + +E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEME 92
Query: 159 LLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGG------------------DVXXXXXX 199
++ + H I+ L + LY+I+ Y G D+
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 200 XXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCT 259
V+ Y Q +E + IHRD+ N+L+ +N MK++DFGL + D
Sbjct: 153 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DIN 208
Query: 260 NLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTP 319
N+ +GR P +W
Sbjct: 209 NIDYYKKT-------------TNGRLP-----VKW------------------------- 225
Query: 320 DYIAPEVLLKKGYGMECDWWSLGAIMYEML-VGYPPF 355
+APE L + Y + D WS G +M+E+ +G P+
Sbjct: 226 --MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 74/160 (46%), Gaps = 6/160 (3%)
Query: 102 KISVDDFDLLTIIGRGAFGEV---RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
+I V + +IG G FGEV RL K + A+K LK + Q +E +
Sbjct: 10 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGG--YTERQRREFLSEAS 67
Query: 159 LLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLA 218
++ + I++L ++ + ++ E++ G + + + + + +
Sbjct: 68 IMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIAS 127
Query: 219 -IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
+ + + +Y+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 128 GMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 167
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 98/275 (35%), Gaps = 71/275 (25%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + A+KKL +
Sbjct: 8 NQFYSVEVGDSTFTVLKRYQN-------LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 60
Query: 143 EMLSRGQVEHVRAERNL--LAEVASHCIVKLYYSFQDAEYL------YLIMEYLPGGDVX 194
+ Q RA R L + V I+ L F + L YL+ME + D
Sbjct: 61 ---FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM---DAN 114
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 115 LXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 255 PLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYS 314
+ + R +++P
Sbjct: 175 TAGTSFMMTPYV-----------------------VTRYYRAP----------------- 194
Query: 315 TVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 349
EV+L GY D WS+G IM EM+
Sbjct: 195 ----------EVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 23/170 (13%)
Query: 98 LKRHKISVDDFDLLTIIGRGAFGEV---RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
L IS+D ++G G FGEV RL K A+K LK + Q
Sbjct: 42 LDATNISID-----KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG--YTEKQRRDFL 94
Query: 155 AERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQ 214
E +++ + I++L ++ + ++ EY+ G + A+F + Q
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQ 148
Query: 215 SVLAIESIHKH-------NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
V + I Y+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLE 198
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 23/170 (13%)
Query: 98 LKRHKISVDDFDLLTIIGRGAFGEV---RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
L IS+D ++G G FGEV RL K A+K LK + Q
Sbjct: 30 LDATNISIDK-----VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG--YTEKQRRDFL 82
Query: 155 AERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQ 214
E +++ + I++L ++ + ++ EY+ G + A+F + Q
Sbjct: 83 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQ 136
Query: 215 SVLAIESIHKH-------NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
V + I Y+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 137 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 186
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 23/170 (13%)
Query: 98 LKRHKISVDDFDLLTIIGRGAFGEV---RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
L IS+D ++G G FGEV RL K A+K LK + Q
Sbjct: 13 LDATNISIDK-----VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG--YTEKQRRDFL 65
Query: 155 AERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQ 214
E +++ + I++L ++ + ++ EY+ G + A+F + Q
Sbjct: 66 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQ 119
Query: 215 SVLAIESIHKH-------NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
V + I Y+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 120 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 169
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 21/180 (11%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + A+KKL +
Sbjct: 1 NQFYSVEVGDSTFTVLKRYQN-------LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 53
Query: 143 EMLSRGQVEHVRAERNL-LAEVASH-CIVKLYYSFQDAEYL------YLIMEYLPGGDVX 194
+ Q RA R L L + +H I+ L F + L YL+ME + D
Sbjct: 54 ---FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM---DAN 107
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 108 LXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 167
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 21/34 (61%)
Query: 316 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 349
V T Y APEV+L GY D WS+G IM EM+
Sbjct: 179 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 21/180 (11%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + A+KKL +
Sbjct: 8 NQFYSVEVGDSTFTVLKRYQN-------LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 60
Query: 143 EMLSRGQVEHVRAERNL-LAEVASH-CIVKLYYSFQDAEYL------YLIMEYLPGGDVX 194
+ Q RA R L L + +H I+ L F + L YL+ME + D
Sbjct: 61 ---FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM---DAN 114
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 115 LXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 21/34 (61%)
Query: 316 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 349
V T Y APEV+L GY D WS+G IM EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + A+KKL +
Sbjct: 46 NQFYSVEVGDSTFTVLKRYQN-------LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 98
Query: 143 EMLSRGQVEHVRAERNL-LAEVASH-CIVKLYYSFQDAEYL------YLIMEYLPGGDVX 194
+ Q RA R L L + +H I+ L F + L YL+ME + D
Sbjct: 99 ---FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM---DAN 152
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 153 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 23/170 (13%)
Query: 98 LKRHKISVDDFDLLTIIGRGAFGEV---RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
L IS+D ++G G FGEV RL K A+K LK + Q
Sbjct: 42 LDATNISID-----KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG--YTEKQRRDFL 94
Query: 155 AERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQ 214
E +++ + I++L ++ + ++ EY+ G + A+F + Q
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQ 148
Query: 215 SVLAIESIHKH-------NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
V + I Y+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 105/265 (39%), Gaps = 67/265 (25%)
Query: 104 SVDDFDL----LTI---IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAE 156
S DD+++ +T+ IG G+FG V + K G++ A+K L + + Q++ + E
Sbjct: 3 SSDDWEIPDGQITVGQRIGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNE 58
Query: 157 RNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIA-QS 215
+L + H + L+ + L ++ ++ G + IA Q+
Sbjct: 59 VGVLRKT-RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQT 117
Query: 216 VLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
++ +H + IHRD+K +N+ L ++ +K+ DFGL
Sbjct: 118 ARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT--------------------- 156
Query: 276 XXSMDVDGRFPESGCGRRWKSP--LEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKG-- 331
RW EQL G+ ++APEV+ +
Sbjct: 157 --------------VKSRWSGSHQFEQLS--------------GSILWMAPEVIRMQDSN 188
Query: 332 -YGMECDWWSLGAIMYEMLVGYPPF 355
Y + D ++ G ++YE++ G P+
Sbjct: 189 PYSFQSDVYAFGIVLYELMTGQLPY 213
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 23/170 (13%)
Query: 98 LKRHKISVDDFDLLTIIGRGAFGEV---RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
L IS+D ++G G FGEV RL K A+K LK + Q
Sbjct: 42 LDATNISID-----KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG--YTEKQRRDFL 94
Query: 155 AERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQ 214
E +++ + I++L ++ + ++ EY+ G + A+F + Q
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQ 148
Query: 215 SVLAIESIHKH-------NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
V + I Y+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 23/170 (13%)
Query: 98 LKRHKISVDDFDLLTIIGRGAFGEV---RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
L IS+D ++G G FGEV RL K A+K LK + Q
Sbjct: 42 LDATNISID-----KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG--YTEKQRRDFL 94
Query: 155 AERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQ 214
E +++ + I++L ++ + ++ EY+ G + A+F + Q
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQ 148
Query: 215 SVLAIESIHKH-------NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
V + I Y+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 21/180 (11%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + A+KKL +
Sbjct: 8 NQFYSVEVGDSTFTVLKRYQN-------LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 60
Query: 143 EMLSRGQVEHVRAERNL--LAEVASHCIVKLYYSFQDAEYL------YLIMEYLPGGDVX 194
+ Q RA R L + V I+ L F + L YL+ME + D
Sbjct: 61 ---FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM---DAN 114
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 115 LXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 21/34 (61%)
Query: 316 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 349
V T Y APEV+L GY D WS+G IM EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 30/160 (18%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLK---KSEMLSRGQVEHVRAERNLLAEVASHCI-- 168
IG GA+G V ++ SG+ A+K ++ E L V V R L A + +
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 169 --------------VKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQ 214
V L + D + + + P G + + Q
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-----------LPAETIKDLMRQ 120
Query: 215 SVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ ++ +H + +HRD+KP+N+L+ G +KL+DFGL +
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR 160
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 19/35 (54%)
Query: 321 YIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 355
Y APEVLL+ Y D WS+G I EM P F
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 23/170 (13%)
Query: 98 LKRHKISVDDFDLLTIIGRGAFGEV---RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
L IS+D ++G G FGEV RL K A+K LK + Q
Sbjct: 42 LDATNISID-----KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG--YTEKQRRDFL 94
Query: 155 AERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQ 214
E +++ + I++L ++ + ++ EY+ G + A+F + Q
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQ 148
Query: 215 SVLAIESIHKH-------NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
V + I Y+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 98/277 (35%), Gaps = 78/277 (28%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQ-------EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
D L +G GAFG+V + + + K A+K LK + + + +E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEME 92
Query: 159 LLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGG------------------DVXXXXXX 199
++ + H I+ L + LY+I+ Y G D+
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 200 XXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCT 259
V+ Y Q +E + IHRD+ N+L+ +N MK++DFGL + D
Sbjct: 153 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DIN 208
Query: 260 NLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTP 319
N+ +GR P +W
Sbjct: 209 NIDYYKKT-------------TNGRLP-----VKW------------------------- 225
Query: 320 DYIAPEVLLKKGYGMECDWWSLGAIMYEML-VGYPPF 355
+APE L + Y + D WS G +M+E+ +G P+
Sbjct: 226 --MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 30/160 (18%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLK---KSEMLSRGQVEHVRAERNLLAEVASHCI-- 168
IG GA+G V ++ SG+ A+K ++ E L V V R L A + +
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 169 --------------VKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQ 214
V L + D + + + P G + + Q
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-----------LPAETIKDLMRQ 120
Query: 215 SVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ ++ +H + +HRD+KP+N+L+ G +KL+DFGL +
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR 160
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 19/35 (54%)
Query: 321 YIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 355
Y APEVLL+ Y D WS+G I EM P F
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 23/170 (13%)
Query: 98 LKRHKISVDDFDLLTIIGRGAFGEV---RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
L IS+D ++G G FGEV RL K A+K LK + Q
Sbjct: 40 LDATNISID-----KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG--YTEKQRRDFL 92
Query: 155 AERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQ 214
E +++ + I++L ++ + ++ EY+ G + A+F + Q
Sbjct: 93 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQ 146
Query: 215 SVLAIESIHKH-------NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
V + I Y+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 147 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 196
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 61/160 (38%), Gaps = 43/160 (26%)
Query: 218 AIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXX 277
A+E +H +HRD+KP N+ + +K+ DFGL
Sbjct: 176 AVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLV-----------------------T 212
Query: 278 SMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECD 337
+MD D EQ + VGT Y++PE + Y + D
Sbjct: 213 AMDQDEE--------------EQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVD 258
Query: 338 WWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFP 377
+SLG I++E+L + + R I +N LKFP
Sbjct: 259 IFSLGLILFELLYSF-----STQMERVRIITDVRN-LKFP 292
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 6/169 (3%)
Query: 93 TEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGN---IYAMKKLKKSEMLSRGQ 149
E +R +I + + +IG G FGEV K G A+K LK + Q
Sbjct: 20 NEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG--YTEKQ 77
Query: 150 VEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR 209
+E +++ + ++ L + + +I E++ G + +
Sbjct: 78 RRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL 137
Query: 210 FYIAQSVLA-IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
+ + + A ++ + NY+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 138 VGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 186
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + A+KKL +
Sbjct: 46 NQFYSVEVGDSTFTVLKRYQN-------LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 98
Query: 143 EMLSRGQVEHVRAERNL-LAEVASH-CIVKLYYSFQDAEYL------YLIMEYLPGGDVX 194
+ Q RA R L L + +H I+ L F + L YL+ME + D
Sbjct: 99 ---FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM---DAN 152
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 153 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + A+KKL +
Sbjct: 1 NQFYSVEVGDSTFTVLKRYQN-------LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 53
Query: 143 EMLSRGQVEHVRAERNL-LAEVASH-CIVKLYYSFQDAEYL------YLIMEYLPGGDVX 194
+ Q RA R L L + +H I+ L F + L YL+ME + D
Sbjct: 54 ---FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM---DAN 107
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 108 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + A+KKL +
Sbjct: 9 NQFYSVEVGDSTFTVLKRYQN-------LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 61
Query: 143 EMLSRGQVEHVRAERNL-LAEVASH-CIVKLYYSFQDAEYL------YLIMEYLPGGDVX 194
+ Q RA R L L + +H I+ L F + L YL+ME + D
Sbjct: 62 ---FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM---DAN 115
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 116 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + A+KKL +
Sbjct: 2 NQFYSVEVGDSTFTVLKRYQN-------LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 54
Query: 143 EMLSRGQVEHVRAERNL-LAEVASH-CIVKLYYSFQDAEYL------YLIMEYLPGGDVX 194
+ Q RA R L L + +H I+ L F + L YL+ME + D
Sbjct: 55 ---FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM---DAN 108
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 109 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
Query: 110 LLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIV 169
L I+G+GA V + KK+G+++A+K L V+ E +L ++ IV
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLNHKNIV 70
Query: 170 KLYYSFQD--AEYLYLIMEYLPGGDVXXXXXXXXXXXXXV-ARFYIA--QSVLAIESIHK 224
KL+ ++ + LIME+ P G + + F I V + + +
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 225 HNYIHRDIKPDNLL--LDQNGH--MKLSDFGLCKPLD 257
+ +HR+IKP N++ + ++G KL+DFG + L+
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 8/47 (17%)
Query: 317 GTPDYIAPE-----VLLK---KGYGMECDWWSLGAIMYEMLVGYPPF 355
GT +Y+ P+ VL K K YG D WS+G Y G PF
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + A+KKL +
Sbjct: 2 NQFYSVEVGDSTFTVLKRYQN-------LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 54
Query: 143 EMLSRGQVEHVRAERNL-LAEVASH-CIVKLYYSFQDAEYL------YLIMEYLPGGDVX 194
+ Q RA R L L + +H I+ L F + L YL+ME + D
Sbjct: 55 ---FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM---DAN 108
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 109 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + A+KKL +
Sbjct: 7 NQFYSVEVGDSTFTVLKRYQN-------LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 59
Query: 143 EMLSRGQVEHVRAERNL-LAEVASH-CIVKLYYSFQDAEYL------YLIMEYLPGGDVX 194
+ Q RA R L L + +H I+ L F + L YL+ME + D
Sbjct: 60 ---FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM---DAN 113
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 114 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 173
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + A+KKL +
Sbjct: 8 NQFYSVEVGDSTFTVLKRYQN-------LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 60
Query: 143 EMLSRGQVEHVRAERNL-LAEVASH-CIVKLYYSFQDAEYL------YLIMEYLPGGDVX 194
+ Q RA R L L + +H I+ L F + L YL+ME + D
Sbjct: 61 ---FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM---DAN 114
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + A+KKL +
Sbjct: 9 NQFYSVEVGDSTFTVLKRYQN-------LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 61
Query: 143 EMLSRGQVEHVRAERNL-LAEVASH-CIVKLYYSFQDAEYL------YLIMEYLPGGDVX 194
+ Q RA R L L + +H I+ L F + L YL+ME + D
Sbjct: 62 ---FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM---DAN 115
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 116 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + A+KKL +
Sbjct: 8 NQFYSVEVGDSTFTVLKRYQN-------LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 60
Query: 143 EMLSRGQVEHVRAERNL-LAEVASH-CIVKLYYSFQDAEYL------YLIMEYLPGGDVX 194
+ Q RA R L L + +H I+ L F + L YL+ME + D
Sbjct: 61 ---FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM---DAN 114
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 101/263 (38%), Gaps = 54/263 (20%)
Query: 108 FDLLTIIGRG--AFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
++LLT+IG+G V L + K +G ++++ E S V ++ E ++
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINL-EACSNEMVTFLQGELHVSKLFNH 69
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXX-XXXXXXXXXVARFYIAQSVL-AIESIH 223
IV +F L+++ ++ G +A YI Q VL A++ IH
Sbjct: 70 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 129
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
Y+HR +K ++L+ +G + LS
Sbjct: 130 HMGYVHRSVKASHILISVDGKVYLSGL--------------------------------- 156
Query: 284 RFPESGCGRRWKSPLEQLQHWQINR--RKLAYSTVGTPDYIAPEVLLK--KGYGMECDWW 339
+S L + H Q R +V +++PEVL + +GY + D +
Sbjct: 157 -----------RSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIY 205
Query: 340 SLGAIMYEMLVGYPPFYSDDPVT 362
S+G E+ G+ PF D P T
Sbjct: 206 SVGITACELANGHVPF-KDMPAT 227
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 103/280 (36%), Gaps = 77/280 (27%)
Query: 101 HKISVDDFDLLTIIGRGAFGEVRLCQ-----EKKSGNIYAMKKLKKSEMLSRGQVEHVRA 155
H I D L +G GAFG+V L + ++ + A+K LK++ +R + +
Sbjct: 36 HHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR---QDFQR 92
Query: 156 ERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA------- 208
E LL + IV+ + + L ++ EY+ GD+ +A
Sbjct: 93 EAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 152
Query: 209 -----------RFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
+A ++ + +H ++HRD+ N L+ Q +K+ DFG+ + +
Sbjct: 153 GPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIY 209
Query: 258 CTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVG 317
T+ + G R P+
Sbjct: 210 STDYYRV--------------------------GGRTMLPIR------------------ 225
Query: 318 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV-GYPPFY 356
++ PE +L + + E D WS G +++E+ G P+Y
Sbjct: 226 ---WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 262
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 10/147 (6%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG G FGE+RL + + A +K + SR H+ A + ++YY
Sbjct: 8 IGCGNFGELRLGKNLYTNEYVA---IKLEPIKSRAPQLHLEYRFYKQLGSAGEGLPQVYY 64
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLA-IESIHKHNYIHRDI 232
+Y +++E L G + IA +L+ +E +H N I+RD+
Sbjct: 65 FGPXGKYNAMVLELL-GPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSKNLIYRDV 123
Query: 233 KPDNLLLDQNGHMK-----LSDFGLCK 254
KP+N L+ + G+ K + DFGL K
Sbjct: 124 KPENFLIGRQGNKKEHVIHIIDFGLAK 150
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 101/263 (38%), Gaps = 54/263 (20%)
Query: 108 FDLLTIIGRG--AFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
++LLT+IG+G V L + K +G ++++ E S V ++ E ++
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINL-EACSNEMVTFLQGELHVSKLFNH 85
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXX-XXXXXXXXXVARFYIAQSVL-AIESIH 223
IV +F L+++ ++ G +A YI Q VL A++ IH
Sbjct: 86 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 145
Query: 224 KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDG 283
Y+HR +K ++L+ +G + LS
Sbjct: 146 HMGYVHRSVKASHILISVDGKVYLSGL--------------------------------- 172
Query: 284 RFPESGCGRRWKSPLEQLQHWQINR--RKLAYSTVGTPDYIAPEVLLK--KGYGMECDWW 339
+S L + H Q R +V +++PEVL + +GY + D +
Sbjct: 173 -----------RSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIY 221
Query: 340 SLGAIMYEMLVGYPPFYSDDPVT 362
S+G E+ G+ PF D P T
Sbjct: 222 SVGITACELANGHVPF-KDMPAT 243
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 314 STVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDD 359
+ V T Y APEV+L G+ CD WS+G I+ E +G+ F + D
Sbjct: 193 TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 93/250 (37%), Gaps = 53/250 (21%)
Query: 113 IIGRGAFGEV---RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIV 169
IIG G GEV RL + A+K LK + Q +E +++ + I+
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG--YTERQRRDFLSEASIMGQFDHPNII 113
Query: 170 KLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLA-IESIHKHNYI 228
+L ++ EY+ G + + + + V A + + Y+
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYV 173
Query: 229 HRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPES 288
HRD+ N+L+D N K+SDFGL + L+ D D + +
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLED---------------------DPDAAYTTT 212
Query: 289 GCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 348
G K P+ + APE + + + D WS G +M+E+
Sbjct: 213 GG----KIPIR---------------------WTAPEAIAFRTFSSASDVWSFGVVMWEV 247
Query: 349 LV-GYPPFYS 357
L G P+++
Sbjct: 248 LAYGERPYWN 257
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 23/170 (13%)
Query: 98 LKRHKISVDDFDLLTIIGRGAFGEV---RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
L IS+D ++G G FGEV RL K A+K LK + Q
Sbjct: 42 LDATNISID-----KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG--YTEKQRRDFL 94
Query: 155 AERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQ 214
E +++ + I++L ++ + ++ EY+ G + A+F + Q
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQ 148
Query: 215 SVLAIESIHKH-------NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
V + I Y+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLE 198
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 103/280 (36%), Gaps = 77/280 (27%)
Query: 101 HKISVDDFDLLTIIGRGAFGEVRLCQ-----EKKSGNIYAMKKLKKSEMLSRGQVEHVRA 155
H I D L +G GAFG+V L + ++ + A+K LK++ +R + +
Sbjct: 13 HHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR---QDFQR 69
Query: 156 ERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA------- 208
E LL + IV+ + + L ++ EY+ GD+ +A
Sbjct: 70 EAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 129
Query: 209 -----------RFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
+A ++ + +H ++HRD+ N L+ Q +K+ DFG+ + +
Sbjct: 130 GPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIY 186
Query: 258 CTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVG 317
T+ + G R P+
Sbjct: 187 STDYYRV--------------------------GGRTMLPIR------------------ 202
Query: 318 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV-GYPPFY 356
++ PE +L + + E D WS G +++E+ G P+Y
Sbjct: 203 ---WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 239
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 103/280 (36%), Gaps = 77/280 (27%)
Query: 101 HKISVDDFDLLTIIGRGAFGEVRLCQ-----EKKSGNIYAMKKLKKSEMLSRGQVEHVRA 155
H I D L +G GAFG+V L + ++ + A+K LK++ +R + +
Sbjct: 7 HHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR---QDFQR 63
Query: 156 ERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA------- 208
E LL + IV+ + + L ++ EY+ GD+ +A
Sbjct: 64 EAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 123
Query: 209 -----------RFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
+A ++ + +H ++HRD+ N L+ Q +K+ DFG+ + +
Sbjct: 124 GPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIY 180
Query: 258 CTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVG 317
T+ + G R P+
Sbjct: 181 STDYYRV--------------------------GGRTMLPIR------------------ 196
Query: 318 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV-GYPPFY 356
++ PE +L + + E D WS G +++E+ G P+Y
Sbjct: 197 ---WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 233
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 21/180 (11%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + A+KKL +
Sbjct: 8 NQFYSVEVGDSTFTVLKRYQN-------LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 60
Query: 143 EMLSRGQVEHVRAERNL--LAEVASHCIVKLYYSFQDAEYL------YLIMEYLPGGDVX 194
+ Q RA R L + V I+ L F + L YL+ME + D
Sbjct: 61 ---FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM---DAN 114
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 21/34 (61%)
Query: 316 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 349
V T Y APEV+L GY D WS+G IM EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 105/265 (39%), Gaps = 67/265 (25%)
Query: 104 SVDDFDL----LTI---IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAE 156
S DD+++ +T+ IG G+FG V + K G++ A+K L + + Q++ + E
Sbjct: 15 SSDDWEIPDGQITVGQRIGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNE 70
Query: 157 RNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIA-QS 215
+L + H + L+ + L ++ ++ G + IA Q+
Sbjct: 71 VGVLRKT-RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQT 129
Query: 216 VLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXX 275
++ +H + IHRD+K +N+ L ++ +K+ DFGL
Sbjct: 130 ARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS------------------ 171
Query: 276 XXSMDVDGRFPESGCGRRWKSP--LEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKG-- 331
RW EQL G+ ++APEV+ +
Sbjct: 172 -----------------RWSGSHQFEQLS--------------GSILWMAPEVIRMQDSN 200
Query: 332 -YGMECDWWSLGAIMYEMLVGYPPF 355
Y + D ++ G ++YE++ G P+
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 23/170 (13%)
Query: 98 LKRHKISVDDFDLLTIIGRGAFGEV---RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
L IS+D ++G G FGEV RL K A+K LK + Q
Sbjct: 42 LDATNISID-----KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG--YTEKQRRDFL 94
Query: 155 AERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQ 214
E +++ + I++L ++ + ++ EY+ G + A+F + Q
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQ 148
Query: 215 SVLAIESIHKH-------NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
V + I ++HRD+ N+L++ N K+SDFGL + L+
Sbjct: 149 LVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 18/155 (11%)
Query: 113 IIGRGAFGEV---RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIV 169
+IG G FGEV RL K A+K LK + Q +E +++ + I+
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAG--YTDKQRRDFLSEASIMGQFDHPNII 78
Query: 170 KLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI------- 222
L + + +I EY+ G + RF + Q V + I
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKND------GRFTVIQLVGMLRGIGSGMKYL 132
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
+Y+HRD+ N+L++ N K+SDFG+ + L+
Sbjct: 133 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLE 167
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 214 QSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
Q + ++ +H + +HRD+KP+N+L+ G +KL+DFGL +
Sbjct: 128 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR 168
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 19/35 (54%)
Query: 321 YIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 355
Y APEVLL+ Y D WS+G I EM P F
Sbjct: 185 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 219
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 98/266 (36%), Gaps = 64/266 (24%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL-LAEVASH-CI 168
L IG GA G V + A+KKL + + Q RA R L L + +H I
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 169 VKLYYSF------QDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI 222
+ L F ++ + +Y++ME + D + + Q + I+ +
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELM---DANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
H IHRD+KP N+++ + +K+ DFGL + + +
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMME------------------- 183
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 342
PE R +++P EV+L GY D WS+G
Sbjct: 184 ---PEV-VTRYYRAP---------------------------EVILGMGYKENVDLWSVG 212
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIV 368
IM EM+ F D + K++
Sbjct: 213 CIMGEMVCHKILFPGRDYIDQWNKVI 238
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + A+KKL +
Sbjct: 8 NNFYSVEIGDSTFTVLKRYQN-------LKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 143 EMLSRGQVEHVRAERNL-LAEVASH-CIVKLYYSFQDAEYL------YLIMEYLPGGDVX 194
+ Q RA R L L + +H I+ L F + L Y++ME + D
Sbjct: 61 ---FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM---DAN 114
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 316 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIV 368
V T Y APEV+L GY D WS+G IM EM+ G F D + K++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI 238
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 18/155 (11%)
Query: 113 IIGRGAFGEV---RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIV 169
+IG G FGEV RL K A+K LK + Q +E +++ + I+
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAG--YTDKQRRDFLSEASIMGQFDHPNII 72
Query: 170 KLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI------- 222
L + + +I EY+ G + RF + Q V + I
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKND------GRFTVIQLVGMLRGIGSGMKYL 126
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
+Y+HRD+ N+L++ N K+SDFG+ + L+
Sbjct: 127 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLE 161
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 6/149 (4%)
Query: 113 IIGRGAFGEV---RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIV 169
+IG G FGEV RL K A+K LK + Q E +++ + I+
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVG--YTEKQRRDFLGEASIMGQFDHPNII 86
Query: 170 KLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLA-IESIHKHNYI 228
L ++ + ++ EY+ G + + + + + A ++ + Y+
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYV 146
Query: 229 HRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
HRD+ N+L++ N K+SDFGL + L+
Sbjct: 147 HRDLAARNILINSNLVCKVSDFGLSRVLE 175
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKL------KKSEMLSRGQVEHVRAERNLLAEVASHC 167
IG+G FG V + K ++ A+K L ++EM+ + Q + E +++ +
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQ--EFQREVFIMSNLNHPN 84
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSV-LAIESIHKHN 226
IVKLY + ++ME++P GD+ + + + L IE + N
Sbjct: 85 IVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN 142
Query: 227 --YIHRDIKPDNLL---LDQNGHM--KLSDFGLCK 254
+HRD++ N+ LD+N + K++DFGL +
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 15/148 (10%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMK----KLKKSEMLSRGQVEHVRAERNLLAEVASHCIV 169
IG G+FG++ L SG A+K K K ++ H+ ++ + + I
Sbjct: 17 IGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQL-------HIESKFYKMMQ-GGVGIP 68
Query: 170 KLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIH 229
+ + + +Y ++ME L Q + IE IH N+IH
Sbjct: 69 SIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIH 128
Query: 230 RDIKPDNLL--LDQNGHM-KLSDFGLCK 254
RD+KPDN L L + G++ + DFGL K
Sbjct: 129 RDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 98/266 (36%), Gaps = 64/266 (24%)
Query: 111 LTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNL-LAEVASH-CI 168
L IG GA G V + A+KKL + + Q RA R L L + +H I
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 169 VKLYYSF------QDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI 222
+ L F ++ + +Y++ME + D + + Q + I+ +
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELM---DANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVD 282
H IHRD+KP N+++ + +K+ DFGL + + +
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMME------------------- 183
Query: 283 GRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 342
PE R +++P EV+L GY D WS+G
Sbjct: 184 ---PEV-VTRYYRAP---------------------------EVILGMGYKENVDIWSVG 212
Query: 343 AIMYEMLVGYPPFYSDDPVTTCRKIV 368
IM EM+ F D + K++
Sbjct: 213 CIMGEMVCHKILFPGRDYIDQWNKVI 238
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 208 ARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLD-QNGHMKLSDFGLCKPLD 257
AR ++ Q + ++ IH N +HRD+KP NL ++ ++ +K+ DFGL + +D
Sbjct: 122 ARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMD 172
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 314 STVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDD 359
+ V T Y PEV+L+ G+ CD WS+G I++E G+ F + +
Sbjct: 207 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE 252
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMK----KLKKSEMLSRGQVEHVRAERNLLAEVASHCIV 169
IG G+FG++ L + +G A+K K K ++ H+ ++ + + I
Sbjct: 17 IGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQL-------HIESKIYKMMQ-GGVGIP 68
Query: 170 KLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIH 229
+ + + +Y ++ME L Q + IE IH N+IH
Sbjct: 69 TIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIH 128
Query: 230 RDIKPDNLL--LDQNGHM-KLSDFGLCK 254
RD+KPDN L L + G++ + DFGL K
Sbjct: 129 RDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Query: 212 IAQSVLAIESIHKHNYIHRDIKPDNLLLDQ-NGHMK----LSDFGLCKPL 256
+ Q+ + +H N +HRD+KP N+L+ N H K +SDFGLCK L
Sbjct: 124 LQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 92/250 (36%), Gaps = 53/250 (21%)
Query: 113 IIGRGAFGEV---RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIV 169
IIG G GEV RL + A+K LK + Q +E +++ + I+
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG--YTERQRRDFLSEASIMGQFDHPNII 113
Query: 170 KLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLA-IESIHKHNYI 228
+L ++ EY+ G + + + + V A + + Y+
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYV 173
Query: 229 HRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPES 288
HRD+ N+L+D N K+SDFGL + L+ D D +
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLED---------------------DPDAAXTTT 212
Query: 289 GCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 348
G K P+ + APE + + + D WS G +M+E+
Sbjct: 213 GG----KIPIR---------------------WTAPEAIAFRTFSSASDVWSFGVVMWEV 247
Query: 349 LV-GYPPFYS 357
L G P+++
Sbjct: 248 LAYGERPYWN 257
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMK----KLKKSEMLSRGQVEHVRAERNLLAEVASHCIV 169
IG G+FG++ L + +G A+K K K ++ H+ ++ + + I
Sbjct: 15 IGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQL-------HIESKIYKMMQ-GGVGIP 66
Query: 170 KLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIH 229
+ + + +Y ++ME L Q + IE IH N+IH
Sbjct: 67 TIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIH 126
Query: 230 RDIKPDNLL--LDQNGHM-KLSDFGLCK 254
RD+KPDN L L + G++ + DFGL K
Sbjct: 127 RDVKPDNFLMGLGKKGNLVYIIDFGLAK 154
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 314 STVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDD 359
+ V T Y PEV+L+ G+ CD WS+G I++E G+ F + +
Sbjct: 198 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE 243
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 19/156 (12%)
Query: 106 DDFDLLTIIGRGAFGEV----RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
DD+ L+ +GRG + EV + ++ KK +E++R N
Sbjct: 38 DDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLRGGTN--- 94
Query: 162 EVASHCIVKLYYSFQD--AEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
I+KL + +D ++ L+ EY+ D RFY+ + + A+
Sbjct: 95 ------IIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFD---IRFYMYELLKAL 145
Query: 220 ESIHKHNYIHRDIKPDNLLLD-QNGHMKLSDFGLCK 254
+ H +HRD+KP N+++D Q ++L D+GL +
Sbjct: 146 DYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE 181
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + A+KKL +
Sbjct: 8 NNFYSVEIGDSTFTVLKRYQN-------LKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 143 EMLSRGQVEHVRAERNL-LAEVASH-CIVKLYYSFQDAEYL------YLIMEYLPGGDVX 194
+ Q RA R L L + +H I+ L F + L Y++ME + D
Sbjct: 61 ---FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM---DAN 114
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 314 STVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDD 359
+ V T Y PEV+L+ G+ CD WS+G I++E G+ F + +
Sbjct: 230 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE 275
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 107/289 (37%), Gaps = 59/289 (20%)
Query: 107 DFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASH 166
D ++ IG G+FG V + + G+ A+K L + + + E +R E ++ +
Sbjct: 38 DLNIKEKIGAGSFGTVH--RAEWHGSDVAVKILMEQDFHAERVNEFLR-EVAIMKRLRHP 94
Query: 167 CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQS---VLAIESIH 223
IV + L ++ EYL G + R ++ + + +H
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 224 KHN--YIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDV 281
N +HRD+K NLL+D+ +K+ DFG
Sbjct: 155 NRNPPIVHRDLKSPNLLVDKKYTVKVCDFG------------------------------ 184
Query: 282 DGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 341
L +L+ K A GTP+++APEVL + + D +S
Sbjct: 185 ----------------LSRLKASXFLXSKXA---AGTPEWMAPEVLRDEPSNEKSDVYSF 225
Query: 342 GAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLI 390
G I++E+ P+ + +P + L+ P L P+ +I
Sbjct: 226 GVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRN--LNPQVAAII 272
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 19/156 (12%)
Query: 106 DDFDLLTIIGRGAFGEV----RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
DD+ L+ +GRG + EV + ++ KK +E++R N
Sbjct: 43 DDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLRGGTN--- 99
Query: 162 EVASHCIVKLYYSFQD--AEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
I+KL + +D ++ L+ EY+ D RFY+ + + A+
Sbjct: 100 ------IIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFD---IRFYMYELLKAL 150
Query: 220 ESIHKHNYIHRDIKPDNLLLD-QNGHMKLSDFGLCK 254
+ H +HRD+KP N+++D Q ++L D+GL +
Sbjct: 151 DYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE 186
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + A+KKL +
Sbjct: 10 NNFYSVEIGDSTFTVLKRYQN-------LKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 62
Query: 143 EMLSRGQVEHVRAERNL-LAEVASH-CIVKLYYSFQDAEYL------YLIMEYLPGGDVX 194
+ Q RA R L L + +H I+ L F + L Y++ME + D
Sbjct: 63 ---FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM---DAN 116
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 117 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 176
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 6/155 (3%)
Query: 107 DFDLLTI----IGRGAFGEVRLCQ-EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
D LLT+ +G G FG V+ + K K+ K+E + + AE N++
Sbjct: 22 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 81
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
++ + IV++ +AE L+ME G + + Q + ++
Sbjct: 82 QLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 140
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+ + N++HRD+ N+LL + K+SDFGL K L
Sbjct: 141 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 175
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 6/155 (3%)
Query: 107 DFDLLTI----IGRGAFGEVRLCQ-EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
D LLT+ +G G FG V+ + K K+ K+E + + AE N++
Sbjct: 24 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 83
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
++ + IV++ +AE L+ME G + + Q + ++
Sbjct: 84 QLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 142
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+ + N++HRD+ N+LL + K+SDFGL K L
Sbjct: 143 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 177
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 6/155 (3%)
Query: 107 DFDLLTI----IGRGAFGEVRLCQ-EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
D LLT+ +G G FG V+ + K K+ K+E + + AE N++
Sbjct: 24 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 83
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
++ + IV++ +AE L+ME G + + Q + ++
Sbjct: 84 QLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 142
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+ + N++HRD+ N+LL + K+SDFGL K L
Sbjct: 143 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 177
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Query: 107 DFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS- 165
+F + IG G FGE+RL + + A +K M SR H+ E ++ S
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVA---IKLEPMKSRAPQLHL--EYRFYKQLGSG 64
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIA-QSVLAIESIHK 224
I ++YY +Y +++E L G + IA Q + +E +H
Sbjct: 65 DGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHS 123
Query: 225 HNYIHRDIKPDNLLLDQNGH-----MKLSDFGLCK 254
N I+RD+KP+N L+ + G+ + + DFGL K
Sbjct: 124 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAK 158
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 100/263 (38%), Gaps = 78/263 (29%)
Query: 212 IAQSVLAIESIHKHNYIHRDIKPDNLLLD-------------QNGHMKLSDFGLCKPLDC 258
+ Q + +H IHRD+KP N+L+ +N + +SDFGLCK LD
Sbjct: 121 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 259 TNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSP--LEQLQHWQINRRKLAYSTV 316
S + P G W++P LE+ + Q RR
Sbjct: 181 GQ----------------SSFRTNLNNPSGTSG--WRAPELLEESNNLQTKRR------- 215
Query: 317 GTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV-GYPPF---YSDDPVTTCRKIVHWKN 372
D +S+G + Y +L G PF YS + + + + +
Sbjct: 216 ---------------LTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLD 258
Query: 373 HLKFPEEARLTPEAKDLICRLLCDVEHR-LGTLGSEQIKAHPWFKDIAWDKLYEMEAAYK 431
+K + L EA DLI ++ ++H L + ++ HP F W K ++E K
Sbjct: 259 EMKCLHDRSLIAEATDLISQM---IDHDPLKRPTAMKVLRHPLF----WPKSKKLEFLLK 311
Query: 432 PEVNGVLDTQN-------FMKFD 447
V+ L+ +N MKFD
Sbjct: 312 --VSDRLEIENRDPPSALLMKFD 332
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + A+KKL +
Sbjct: 9 NNFYSVEIGDSTFTVLKRYQN-------LKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 61
Query: 143 EMLSRGQVEHVRAERNL-LAEVASH-CIVKLYYSF------QDAEYLYLIMEYLPGGDVX 194
+ Q RA R L L + +H I+ L F ++ + +Y++ME + D
Sbjct: 62 ---FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM---DAN 115
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 116 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + A+KKL +
Sbjct: 13 NNFYSVEIGDSTFTVLKRYQN-------LKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 65
Query: 143 EMLSRGQVEHVRAERNL-LAEVASH-CIVKLYYSF------QDAEYLYLIMEYLPGGDVX 194
+ Q RA R L L + +H I+ L F ++ + +Y++ME + D
Sbjct: 66 ---FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM---DAN 119
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 120 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 179
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + A+KKL +
Sbjct: 8 NNFYSVEIGDSTFTVLKRYQN-------LKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 143 EMLSRGQVEHVRAERNL-LAEVASH-CIVKLYYSFQDAEYL------YLIMEYLPGGDVX 194
+ Q RA R L L + +H I+ L F + L Y++ME + D
Sbjct: 61 ---FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM---DAN 114
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 10/192 (5%)
Query: 72 ASSDVPEEEQINILKDLERKETEYMRLK--RHKISVDDFDLLTI----IGRGAFGEVRLC 125
A+ P+ E + + D E E+ Y + R K D LLT+ +G G FG V+
Sbjct: 332 AADKGPQREALPM--DTEVYESPYADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKG 389
Query: 126 Q-EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLI 184
+ K K+ K+E + + AE N++ ++ + IV++ +AE L+
Sbjct: 390 YYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI-GICEAESWMLV 448
Query: 185 MEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGH 244
ME G + + Q + ++ + + N++HRD+ N+LL +
Sbjct: 449 MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY 508
Query: 245 MKLSDFGLCKPL 256
K+SDFGL K L
Sbjct: 509 AKISDFGLSKAL 520
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 6/170 (3%)
Query: 88 LERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQ-EKKSGNIYAMKKLKKSEMLS 146
LE + + L R ++++D +L G G FG V+ + K K+ K+E
Sbjct: 3 LEEIRPKEVYLDRKLLTLEDKEL----GSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND 58
Query: 147 RGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXX 206
+ + AE N++ ++ + IV++ +AE L+ME G +
Sbjct: 59 PALKDELLAEANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDK 117
Query: 207 VARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+ Q + ++ + + N++HRD+ N+LL + K+SDFGL K L
Sbjct: 118 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 6/155 (3%)
Query: 107 DFDLLTI----IGRGAFGEVRLCQ-EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
D LLT+ +G G FG V+ + K K+ K+E + + AE N++
Sbjct: 8 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 67
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
++ + IV++ +AE L+ME G + + Q + ++
Sbjct: 68 QLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 126
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+ + N++HRD+ N+LL + K+SDFGL K L
Sbjct: 127 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 161
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 6/155 (3%)
Query: 107 DFDLLTI----IGRGAFGEVRLCQ-EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
D LLT+ +G G FG V+ + K K+ K+E + + AE N++
Sbjct: 366 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 425
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
++ + IV++ +AE L+ME G + + Q + ++
Sbjct: 426 QLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 484
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+ + N++HRD+ N+LL + K+SDFGL K L
Sbjct: 485 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 519
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + A+KKL +
Sbjct: 2 NNFYSVEIGDSTFTVLKRYQN-------LKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 54
Query: 143 EMLSRGQVEHVRAERNL-LAEVASH-CIVKLYYSF------QDAEYLYLIMEYLPGGDVX 194
+ Q RA R L L + +H I+ L F ++ + +Y++ME + D
Sbjct: 55 ---FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM---DAN 108
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 109 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 6/155 (3%)
Query: 107 DFDLLTI----IGRGAFGEVRLCQ-EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
D LLT+ +G G FG V+ + K K+ K+E + + AE N++
Sbjct: 2 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 61
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
++ + IV++ +AE L+ME G + + Q + ++
Sbjct: 62 QLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 120
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+ + N++HRD+ N+LL + K+SDFGL K L
Sbjct: 121 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 155
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 83 NILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKS 142
N +E ++ + LKR++ L IG GA G V + A+KKL +
Sbjct: 8 NNFYSVEIGDSTFTVLKRYQN-------LKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 143 EMLSRGQVEHVRAERNL-LAEVASH-CIVKLYYSF------QDAEYLYLIMEYLPGGDVX 194
+ Q RA R L L + +H I+ L F ++ + +Y++ME + D
Sbjct: 61 ---FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM---DAN 114
Query: 195 XXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + Q + I+ +H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 6/155 (3%)
Query: 107 DFDLLTI----IGRGAFGEVRLCQ-EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
D LLT+ +G G FG V+ + K K+ K+E + + AE N++
Sbjct: 8 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 67
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
++ + IV++ +AE L+ME G + + Q + ++
Sbjct: 68 QLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 126
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+ + N++HRD+ N+LL + K+SDFGL K L
Sbjct: 127 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 161
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 23/170 (13%)
Query: 98 LKRHKISVDDFDLLTIIGRGAFGEV---RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
L IS+D ++G G FGEV RL K A+K LK + Q
Sbjct: 13 LDATNISIDK-----VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG--YTEKQRRDFL 65
Query: 155 AERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQ 214
E +++ + I++L ++ + ++ E + G + A+F + Q
Sbjct: 66 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD------AQFTVIQ 119
Query: 215 SVLAIESIHKH-------NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
V + I Y+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 120 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 169
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 176 QDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-AIESIHKHNYIHRDIKP 234
++A+ +L+ME LPG + R I S+L ++ ++ K + H D++P
Sbjct: 312 ENAQSGWLVMEKLPG----RLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRP 367
Query: 235 DNLLLDQNGHMKLSDFG--LCKPLDCT 259
N+++D H +L DFG + P DC+
Sbjct: 368 WNVMVDARQHARLIDFGSIVTTPQDCS 394
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 176 QDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-AIESIHKHNYIHRDIKP 234
++A+ +L+ME LPG + R I S+L ++ ++ K + H D++P
Sbjct: 312 ENAQSGWLVMEKLPG----RLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRP 367
Query: 235 DNLLLDQNGHMKLSDFG--LCKPLDCT 259
N+++D H +L DFG + P DC+
Sbjct: 368 WNVMVDARQHARLIDFGSIVTTPQDCS 394
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 6/155 (3%)
Query: 107 DFDLLTI----IGRGAFGEVRLCQ-EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
D LLT+ +G G FG V+ + K K+ K+E + + AE N++
Sbjct: 4 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 63
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
++ + IV++ +AE L+ME G + + Q + ++
Sbjct: 64 QLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 122
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+ + N++HRD+ N+LL + K+SDFGL K L
Sbjct: 123 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 157
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 103/268 (38%), Gaps = 61/268 (22%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS-- 165
++++ +G GAFG+V C + K+G + K+ K+ + R E R+E +L + +
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN--VDR-YCEAARSEIQVLEHLNTTD 72
Query: 166 -----HCIVKLYYSFQDAEYLYLIMEYL--PGGDVXXXXXXXXXXXXXVARFYIAQSVLA 218
C+ L + F+ ++ ++ E L D + R Q +
Sbjct: 73 PNSTFRCVQMLEW-FEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHI-RKMAYQICKS 130
Query: 219 IESIHKHNYIHRDIKPDNLLLDQ-------NGHMKLSDFGLCKPLDCTNLSAIXXXXXXX 271
+ +H + H D+KP+N+L Q N +K + L P ++ +
Sbjct: 131 VNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINP----DIKVVD------ 180
Query: 272 XXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKG 331
F + S L +H++ APEV+L G
Sbjct: 181 -------------FGSATYDDEHHSTLVXXRHYR-----------------APEVILALG 210
Query: 332 YGMECDWWSLGAIMYEMLVGYPPFYSDD 359
+ CD WS+G I+ E +G+ F + D
Sbjct: 211 WSQPCDVWSIGCILIEYYLGFTVFPTHD 238
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 7/159 (4%)
Query: 100 RHKISVDDFDLLTIIGRGAFGEVR---LCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAE 156
++ I+ +D L I+G G FGEV K A+K KK L E +E
Sbjct: 18 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSE 75
Query: 157 RNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR-FYIAQS 215
++ + IVKL + E ++IME P G++ + Y Q
Sbjct: 76 AVIMKNLDHPHIVKLI-GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQI 134
Query: 216 VLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
A+ + N +HRDI N+L+ +KL DFGL +
Sbjct: 135 CKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSR 173
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 7/159 (4%)
Query: 100 RHKISVDDFDLLTIIGRGAFGEVR---LCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAE 156
++ I+ +D L I+G G FGEV K A+K KK L E +E
Sbjct: 6 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSE 63
Query: 157 RNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR-FYIAQS 215
++ + IVKL + E ++IME P G++ + Y Q
Sbjct: 64 AVIMKNLDHPHIVKLI-GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQI 122
Query: 216 VLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
A+ + N +HRDI N+L+ +KL DFGL +
Sbjct: 123 CKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSR 161
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 7/159 (4%)
Query: 100 RHKISVDDFDLLTIIGRGAFGEVR---LCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAE 156
++ I+ +D L I+G G FGEV K A+K KK L E +E
Sbjct: 2 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSE 59
Query: 157 RNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR-FYIAQS 215
++ + IVKL + E ++IME P G++ + Y Q
Sbjct: 60 AVIMKNLDHPHIVKLI-GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQI 118
Query: 216 VLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
A+ + N +HRDI N+L+ +KL DFGL +
Sbjct: 119 CKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSR 157
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 23/170 (13%)
Query: 98 LKRHKISVDDFDLLTIIGRGAFGEV---RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
L IS+D ++G G FGEV RL K A+K LK + Q
Sbjct: 42 LDATNISID-----KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG--YTEKQRRDFL 94
Query: 155 AERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQ 214
E +++ + I++L ++ + ++ E + G + A+F + Q
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD------AQFTVIQ 148
Query: 215 SVLAIESIHKH-------NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
V + I Y+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 93 TEYMRLKRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKL------KKSEMLS 146
+E+ + + ++ ++ + IG+G FG V + K ++ A+K L ++EM+
Sbjct: 6 SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
Query: 147 RGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXX 206
+ Q + E +++ + IVKLY + ++ME++P GD+
Sbjct: 66 KFQ--EFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKW 121
Query: 207 VARFYIAQSV-LAIESIHKHN--YIHRDIKPDNLL---LDQNGHM--KLSDFG 251
+ + + L IE + N +HRD++ N+ LD+N + K++DFG
Sbjct: 122 SVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 6/149 (4%)
Query: 113 IIGRGAFGEVRLCQEKKSGN---IYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIV 169
+IG G FGEV K G A+K LK + Q +E +++ + ++
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG--YTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 170 KLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLA-IESIHKHNYI 228
L + + +I E++ G + + + + + A ++ + NY+
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 131
Query: 229 HRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
HR + N+L++ N K+SDFGL + L+
Sbjct: 132 HRALAARNILVNSNLVCKVSDFGLSRFLE 160
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 6/149 (4%)
Query: 113 IIGRGAFGEV---RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIV 169
+IG G FGEV RL K A+K LK + Q E +++ + +V
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVG--YTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 170 KLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLA-IESIHKHNYI 228
L + + +++E++ G + + + + + A + + Y+
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYV 167
Query: 229 HRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
HRD+ N+L++ N K+SDFGL + ++
Sbjct: 168 HRDLAARNILVNSNLVCKVSDFGLSRVIE 196
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKL------KKSEMLSRGQVEHVRAERNLLAEVASHC 167
IG+G FG V + K ++ A+K L ++EM+ + Q + E +++ +
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQ--EFQREVFIMSNLNHPN 84
Query: 168 IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSV-LAIESIHKHN 226
IVKLY + ++ME++P GD+ + + + L IE + N
Sbjct: 85 IVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN 142
Query: 227 --YIHRDIKPDNLL---LDQNGHM--KLSDFGLCK 254
+HRD++ N+ LD+N + K++DF L +
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ 177
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 63/156 (40%), Gaps = 15/156 (9%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMK----KLKKSEMLSRGQVEHVRAERNLLA 161
+ F L IG G+FGE+ L ++ A+K K K ++L ++ + +
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIP 66
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
V + + +Y L+M+ L Q + +E
Sbjct: 67 NVRWFGV--------EGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEF 118
Query: 222 IHKHNYIHRDIKPDNLLLD---QNGHMKLSDFGLCK 254
+H +++HRDIKPDN L+ + + + DFGL K
Sbjct: 119 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 18/155 (11%)
Query: 113 IIGRGAFGEV---RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIV 169
+IG G FGEV RL K A+K LK + Q +E +++ + I+
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAG--YTDKQRRDFLSEASIMGQFDHPNII 93
Query: 170 KLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI------- 222
L + + +I EY+ G + RF + Q V + I
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKND------GRFTVIQLVGMLRGIGSGMKYL 147
Query: 223 HKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
+ +HRD+ N+L++ N K+SDFG+ + L+
Sbjct: 148 SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLE 182
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 176 QDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-AIESIHKHNYIHRDIKP 234
++A+ +L+ME LPG + R I S+L ++ ++ K + H D++P
Sbjct: 312 ENAQSGWLVMEKLPG----RLLSDMLAAGEEIDREKILGSLLRSLAALEKKGFWHDDVRP 367
Query: 235 DNLLLDQNGHMKLSDFG--LCKPLDCT 259
N+++D H +L DFG + P DC+
Sbjct: 368 WNVMVDARQHARLIDFGSIVTTPQDCS 394
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 17/155 (10%)
Query: 106 DDFDLLTIIGRGAFGEV----RLCQEKKSGNIYAMKKLKKSEMLSRGQV-EHVRAERNLL 160
DD+ L+ +GRG + EV + +K + +K +KK+++ ++ E++R N++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVV-VKILKPVKKNKIKREIKILENLRGGPNII 95
Query: 161 AEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIE 220
IVK S A L+ E++ D RFY+ + + A++
Sbjct: 96 TLAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQTLTDYD---IRFYMYEILKALD 145
Query: 221 SIHKHNYIHRDIKPDNLLLD-QNGHMKLSDFGLCK 254
H +HRD+KP N+++D ++ ++L D+GL +
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/333 (19%), Positives = 116/333 (34%), Gaps = 65/333 (19%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
+ ++FD +IG G FG+V + + ++ +S S+G E L
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES---SQGIEEFETEIETLSFCR 93
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA---RFYIA-QSVLAI 219
H + + + + E + LI +Y+ G++ ++ R I + +
Sbjct: 94 HPHLVSLIGFCDERNE-MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
+H IHRD+K N+LLD+N K++DFG+ K
Sbjct: 153 HYLHTRAIIHRDVKSINILLDENFVPKITDFGISK------------------------- 187
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWW 339
+ ++++ L GT YI PE +K + D +
Sbjct: 188 ----------------------KGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVY 225
Query: 340 SLGAIMYEMLVGYPPFYSDDPVTTCRKIVHW--KNHLKFPEEARLTPEAKDLI----CRL 393
S G +++E+L P + W ++H E + P D I R
Sbjct: 226 SFGVVLFEVLCARSAIVQSLPREMV-NLAEWAVESHNNGQLEQIVDPNLADKIRPESLRK 284
Query: 394 LCDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEM 426
D + L SE P D+ W Y +
Sbjct: 285 FGDTAVKCLALSSED---RPSMGDVLWKLEYAL 314
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 106 DDFDLLTIIGRGAFGEV----RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
DD+ L+ +GRG + EV + +K KK +E++R N++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
IVK S A L+ E++ D RFY+ + + A++
Sbjct: 97 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQTLTDYD---IRFYMYEILKALDY 146
Query: 222 IHKHNYIHRDIKPDNLLLD-QNGHMKLSDFGLCK 254
H +HRD+KP N+L+D ++ ++L D+GL +
Sbjct: 147 CHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAE 180
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 11/147 (7%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG G FGE+RL + + A +K + SR H+ R A+ + ++YY
Sbjct: 12 IGCGNFGELRLGKNLYTNEYVA---IKLEPIKSRAPQLHLEY-RFYKQLSATEGVPQVYY 67
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIA-QSVLAIESIHKHNYIHRDI 232
+Y +++E L G + IA Q + +E +H + I+RD+
Sbjct: 68 FGPXGKYNAMVLELL-GPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDV 126
Query: 233 KPDNLLLDQNGH-----MKLSDFGLCK 254
KP+N L+ + G + + DFGL K
Sbjct: 127 KPENFLVGRPGTKRQHAIHIIDFGLAK 153
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 13/155 (8%)
Query: 107 DFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS- 165
+F + IG G FGE+RL + + A +K M SR H+ E ++ S
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVA---IKLEPMKSRAPQLHL--EYRFYKQLGSG 64
Query: 166 HCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIA-QSVLAIESIHK 224
I ++YY +Y +++E L G + IA Q + +E +H
Sbjct: 65 DGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHS 123
Query: 225 HNYIHRDIKPDNLLLDQNGH-----MKLSDFGLCK 254
N I+RD+KP+N L+ + G+ + + DF L K
Sbjct: 124 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 13/148 (8%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS-HCIVKLY 172
IG G FGE+RL + + A +K M SR H+ E ++ S I ++Y
Sbjct: 38 IGCGNFGELRLGKNLYTNEYVA---IKLEPMKSRAPQLHL--EYRFYKQLGSGDGIPQVY 92
Query: 173 YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIA-QSVLAIESIHKHNYIHRD 231
Y +Y +++E L G + IA Q + +E +H N I+RD
Sbjct: 93 YFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRD 151
Query: 232 IKPDNLLLDQNGH-----MKLSDFGLCK 254
+KP+N L+ + G+ + + DF L K
Sbjct: 152 VKPENFLIGRPGNKTQQVIHIIDFALAK 179
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 46/130 (35%), Gaps = 48/130 (36%)
Query: 229 HRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPES 288
HRD+KP+N+L+ + L DFG+ S D + +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIA------------------------SATTDEKLTQL 192
Query: 289 GCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 348
G +TVGT Y APE + D ++L ++YE
Sbjct: 193 G------------------------NTVGTLYYXAPERFSESHATYRADIYALTCVLYEC 228
Query: 349 LVGYPPFYSD 358
L G PP+ D
Sbjct: 229 LTGSPPYQGD 238
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/333 (19%), Positives = 115/333 (34%), Gaps = 65/333 (19%)
Query: 104 SVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEV 163
+ ++FD +IG G FG+V + + ++ +S S+G E L
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES---SQGIEEFETEIETLSFCR 93
Query: 164 ASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVA---RFYIA-QSVLAI 219
H + + + + E + LI +Y+ G++ ++ R I + +
Sbjct: 94 HPHLVSLIGFCDERNE-MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 220 ESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSM 279
+H IHRD+K N+LLD+N K++DFG+ K
Sbjct: 153 HYLHTRAIIHRDVKSINILLDENFVPKITDFGISK------------------------- 187
Query: 280 DVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWW 339
+ ++ + L GT YI PE +K + D +
Sbjct: 188 ----------------------KGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVY 225
Query: 340 SLGAIMYEMLVGYPPFYSDDPVTTCRKIVHW--KNHLKFPEEARLTPEAKDLI----CRL 393
S G +++E+L P + W ++H E + P D I R
Sbjct: 226 SFGVVLFEVLCARSAIVQSLPREMV-NLAEWAVESHNNGQLEQIVDPNLADKIRPESLRK 284
Query: 394 LCDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEM 426
D + L SE P D+ W Y +
Sbjct: 285 FGDTAVKCLALSSED---RPSMGDVLWKLEYAL 314
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 100/263 (38%), Gaps = 78/263 (29%)
Query: 212 IAQSVLAIESIHKHNYIHRDIKPDNLLLD-------------QNGHMKLSDFGLCKPLDC 258
+ Q + +H IHRD+KP N+L+ +N + +SDFGLCK LD
Sbjct: 121 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 259 TNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSP--LEQLQHWQINRRKLAYSTV 316
+ P G W++P LE+ + Q RR
Sbjct: 181 GQ----------------XXFRXNLNNPSGTSG--WRAPELLEESNNLQTKRR------- 215
Query: 317 GTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV-GYPPF---YSDDPVTTCRKIVHWKN 372
D +S+G + Y +L G PF YS + + + + +
Sbjct: 216 ---------------LTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLD 258
Query: 373 HLKFPEEARLTPEAKDLICRLLCDVEHR-LGTLGSEQIKAHPWFKDIAWDKLYEMEAAYK 431
+K + L EA DLI ++ ++H L + ++ HP F W K ++E K
Sbjct: 259 EMKCLHDRSLIAEATDLISQM---IDHDPLKRPTAMKVLRHPLF----WPKSKKLEFLLK 311
Query: 432 PEVNGVLDTQN-------FMKFD 447
V+ L+ +N MKFD
Sbjct: 312 --VSDRLEIENRDPPSALLMKFD 332
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 100/264 (37%), Gaps = 84/264 (31%)
Query: 212 IAQSVLAIESIHKHNYIHRDIKPDNLLLD-------------QNGHMKLSDFGLCKPLDC 258
+ Q + +H IHRD+KP N+L+ +N + +SDFGLCK LD
Sbjct: 139 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD- 197
Query: 259 TNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGT 318
SG Q R + GT
Sbjct: 198 -----------------------------SG---------------QXXFRXNLNNPSGT 213
Query: 319 PDYIAPEVL---LKKGYGMECDWWSLGAIMYEMLV-GYPPF---YSDDPVTTCRKIVHWK 371
+ APE+L K+ D +S+G + Y +L G PF YS + + + +
Sbjct: 214 SGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSL 271
Query: 372 NHLKFPEEARLTPEAKDLICRLLCDVEHR-LGTLGSEQIKAHPWFKDIAWDKLYEMEAAY 430
+ +K + L EA DLI ++ ++H L + ++ HP F W K ++E
Sbjct: 272 DEMKCLHDRSLIAEATDLISQM---IDHDPLKRPTAMKVLRHPLF----WPKSKKLEFLL 324
Query: 431 KPEVNGVLDTQN-------FMKFD 447
K V+ L+ +N MKFD
Sbjct: 325 K--VSDRLEIENRDPPSALLMKFD 346
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 100/264 (37%), Gaps = 84/264 (31%)
Query: 212 IAQSVLAIESIHKHNYIHRDIKPDNLLLD-------------QNGHMKLSDFGLCKPLDC 258
+ Q + +H IHRD+KP N+L+ +N + +SDFGLCK LD
Sbjct: 139 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD- 197
Query: 259 TNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGT 318
SG Q R + GT
Sbjct: 198 -----------------------------SG---------------QXXFRXNLNNPSGT 213
Query: 319 PDYIAPEVL---LKKGYGMECDWWSLGAIMYEMLV-GYPPF---YSDDPVTTCRKIVHWK 371
+ APE+L K+ D +S+G + Y +L G PF YS + + + +
Sbjct: 214 SGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSL 271
Query: 372 NHLKFPEEARLTPEAKDLICRLLCDVEHR-LGTLGSEQIKAHPWFKDIAWDKLYEMEAAY 430
+ +K + L EA DLI ++ ++H L + ++ HP F W K ++E
Sbjct: 272 DEMKCLHDRSLIAEATDLISQM---IDHDPLKRPTAMKVLRHPLF----WPKSKKLEFLL 324
Query: 431 KPEVNGVLDTQN-------FMKFD 447
K V+ L+ +N MKFD
Sbjct: 325 K--VSDRLEIENRDPPSALLMKFD 346
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 66/197 (33%), Gaps = 52/197 (26%)
Query: 209 RFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXX 268
++++ +L + +H+ +HRD+ P N+LL N + + DF L +
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARE------------- 183
Query: 269 XXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLL 328
D RW Y APE+++
Sbjct: 184 -----------DTADANKTHYVTHRW--------------------------YRAPELVM 206
Query: 329 K-KGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARL-TPEA 386
+ KG+ D WS G +M EM F KIV K + +P A
Sbjct: 207 QFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSA 266
Query: 387 KDLICRLLCDVEHRLGT 403
+D + L +V R T
Sbjct: 267 RDYLRNSLSNVPARAWT 283
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 65/162 (40%), Gaps = 20/162 (12%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQV---EHVRAERNLLAEVASH-CIV 169
+G GAFG+V G A+ K+ + S E + +E +++ + H IV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 170 KLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI------- 222
L + + +I EY GD+ F IA S L+ +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 223 -------HKHNYIHRDIKPDNLLLDQNGHM-KLSDFGLCKPL 256
N IHRD+ N+LL NGH+ K+ DFGL + +
Sbjct: 174 AQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLARDI 214
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 157 RNLLAEVASHCIVKLYYSFQDAE-----YLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY 211
R LAEV IV+++ + + Y++MEY+ G + +A Y
Sbjct: 130 RQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIA--Y 187
Query: 212 IAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFG 251
+ + + A+ +H ++ D+KP+N++L + +KL D G
Sbjct: 188 LLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLG 226
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 101/285 (35%), Gaps = 63/285 (22%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IGRG+F V + ++ A +L+ + L++ + + + E L + IV+ Y
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRK-LTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 174 SFQDA----EYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHN--Y 227
S++ + + L+ E G + V R + Q + ++ +H
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPI 152
Query: 228 IHRDIKPDNLLLD-QNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFP 286
IHRD+K DN+ + G +K+ D GL
Sbjct: 153 IHRDLKCDNIFITGPTGSVKIGDLGLA--------------------------------- 179
Query: 287 ESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 346
+ R A + +GTP++ APE +K Y D ++ G
Sbjct: 180 ------------------TLKRASFAKAVIGTPEFXAPEXYEEK-YDESVDVYAFGXCXL 220
Query: 347 EMLVG-YPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLI 390
E YP + R++ F + A PE K++I
Sbjct: 221 EXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVA--IPEVKEII 263
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 23/170 (13%)
Query: 98 LKRHKISVDDFDLLTIIGRGAFGEV---RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVR 154
L IS+D ++G G FGEV RL K A+K LK + Q
Sbjct: 42 LDATNISID-----KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG--YTEKQRRDFL 94
Query: 155 AERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQ 214
E +++ + I++L ++ + ++ E + G + A+F + Q
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD------AQFTVIQ 148
Query: 215 SVLAIESIHKH-------NYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
V + I +HRD+ N+L++ N K+SDFGL + L+
Sbjct: 149 LVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 57 IQERKQRRSVLERKLASSDVPEEEQIN--ILKDLERKETEYMRLKRHKISVDDFDLLTII 114
+++R RR + ER+L P E N +L+ L KETE+ ++K ++
Sbjct: 13 VRKRTLRRLLQERELVEPLTPSGEAPNQALLRIL--KETEFKKIK-------------VL 57
Query: 115 GRGAFGEVR----LCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVK 170
G GAFG V + + +K A+ +L+ E S + + E ++A V + + +
Sbjct: 58 GSGAFGTVYKGLWIPEGEKVKIPVAIMELR--EATSPKANKEILDEAYVMASVDNPHVCR 115
Query: 171 LYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIESIHKHNYIH 229
L + LI + +P G + + Q + + +H
Sbjct: 116 LL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 174
Query: 230 RDIKPDNLLLDQNGHMKLSDFGLCKPL 256
RD+ N+L+ H+K++DFGL K L
Sbjct: 175 RDLAARNVLVKTPQHVKITDFGLAKLL 201
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 9/160 (5%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRLCQ-EKKSGNIYAMK-KLKKSEMLSRGQV--EHVRAERN 158
I D LL +G G+FG VR + + SG ++ K K ++LS+ + + +R E N
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIR-EVN 73
Query: 159 LLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXX--XXXXVARFYIAQSV 216
+ + +++LY + ++ E P G + ++R Y Q
Sbjct: 74 AMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVA 131
Query: 217 LAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+ + +IHRD+ NLLL +K+ DFGL + L
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 9/160 (5%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRLCQ-EKKSGNIYAMK-KLKKSEMLSRGQV--EHVRAERN 158
I D LL +G G+FG VR + + SG ++ K K ++LS+ + + +R E N
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIR-EVN 67
Query: 159 LLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXX--XXXXVARFYIAQSV 216
+ + +++LY + ++ E P G + ++R Y Q
Sbjct: 68 AMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVA 125
Query: 217 LAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+ + +IHRD+ NLLL +K+ DFGL + L
Sbjct: 126 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 165
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 9/160 (5%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRLCQ-EKKSGNIYAMK-KLKKSEMLSRGQV--EHVRAERN 158
I D LL +G G+FG VR + + SG ++ K K ++LS+ + + +R E N
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIR-EVN 73
Query: 159 LLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXX--XXXXVARFYIAQSV 216
+ + +++LY + ++ E P G + ++R Y Q
Sbjct: 74 AMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVA 131
Query: 217 LAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+ + +IHRD+ NLLL +K+ DFGL + L
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 26/189 (13%)
Query: 73 SSDVPEEEQINILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVR----LCQEK 128
S + P + + ILK ETE+ ++K ++G GAFG V + + +
Sbjct: 1 SGEAPNQALLRILK-----ETEFKKIK-------------VLGSGAFGTVYKGLWIPEGE 42
Query: 129 KSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYL 188
K A+K+L+ E S + + E ++A V + + +L + LIM+ +
Sbjct: 43 KVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL-GICLTSTVQLIMQLM 99
Query: 189 PGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKL 247
P G + + Q + + +HRD+ N+L+ H+K+
Sbjct: 100 PFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 159
Query: 248 SDFGLCKPL 256
+DFGL K L
Sbjct: 160 TDFGLAKLL 168
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 9/160 (5%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRLCQ-EKKSGNIYAMK-KLKKSEMLSRGQV--EHVRAERN 158
I D LL +G G+FG VR + + SG ++ K K ++LS+ + + +R E N
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIR-EVN 63
Query: 159 LLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXX--XXXXXVARFYIAQSV 216
+ + +++LY + ++ E P G + ++R Y Q
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVA 121
Query: 217 LAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+ + +IHRD+ NLLL +K+ DFGL + L
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 9/160 (5%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRLCQ-EKKSGNIYAMK-KLKKSEMLSRGQV--EHVRAERN 158
I D LL +G G+FG VR + + SG ++ K K ++LS+ + + +R E N
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIR-EVN 63
Query: 159 LLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXX--XXXXXVARFYIAQSV 216
+ + +++LY + ++ E P G + ++R Y Q
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVA 121
Query: 217 LAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+ + +IHRD+ NLLL +K+ DFGL + L
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 9/160 (5%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRLCQ-EKKSGNIYAMK-KLKKSEMLSRGQV--EHVRAERN 158
I D LL +G G+FG VR + + SG ++ K K ++LS+ + + +R E N
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIR-EVN 67
Query: 159 LLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXX--XXXXXVARFYIAQSV 216
+ + +++LY + ++ E P G + ++R Y Q
Sbjct: 68 AMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVA 125
Query: 217 LAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+ + +IHRD+ NLLL +K+ DFGL + L
Sbjct: 126 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 165
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 35/180 (19%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSG-------NIYAMKKLKKSEMLSRGQVEHVRAERN 158
++ + + IG GAFG R+ Q + G + A+K LK+ E + Q + R E
Sbjct: 47 NNIEYVRDIGEGAFG--RVFQARAPGLLPYEPFTMVAVKMLKE-EASADMQADFQR-EAA 102
Query: 159 LLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGD------------VXXXXXXXXXXXXX 206
L+AE + IVKL + + L+ EY+ GD V
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 207 VA-----------RFYIAQSVLA-IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
V+ + IA+ V A + + + ++HRD+ N L+ +N +K++DFGL +
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSR 222
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 9/160 (5%)
Query: 103 ISVDDFDLLTIIGRGAFGEVRLCQ-EKKSGNIYAMK-KLKKSEMLSRGQV--EHVRAERN 158
I D LL +G G+FG VR + + SG ++ K K ++LS+ + + +R E N
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIR-EVN 63
Query: 159 LLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXX--XXXXXVARFYIAQSV 216
+ + +++LY + ++ E P G + ++R Y Q
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVA 121
Query: 217 LAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+ + +IHRD+ NLLL +K+ DFGL + L
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 62/158 (39%), Gaps = 3/158 (1%)
Query: 99 KRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
+ ++I + +L IG G FG+V N +K + + V +
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 159 LLAEVASHC-IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR-FYIAQSV 216
L H IVKL + +++IME G++ + Y Q
Sbjct: 63 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS 121
Query: 217 LAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
A+ + ++HRDI N+L+ N +KL DFGL +
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 79/190 (41%), Gaps = 26/190 (13%)
Query: 72 ASSDVPEEEQINILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVR----LCQE 127
S + P + + ILK ETE+ ++K ++G GAFG V + +
Sbjct: 1 GSGEAPNQALLRILK-----ETEFKKIK-------------VLGSGAFGTVYKGLWIPEG 42
Query: 128 KKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEY 187
+K A+K+L+ E S + + E ++A V + + +L + LIM+
Sbjct: 43 EKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL-GICLTSTVQLIMQL 99
Query: 188 LPGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMK 246
+P G + + Q + + +HRD+ N+L+ H+K
Sbjct: 100 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVK 159
Query: 247 LSDFGLCKPL 256
++DFGL K L
Sbjct: 160 ITDFGLAKLL 169
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 107/296 (36%), Gaps = 79/296 (26%)
Query: 100 RHKISVDDFDLLTIIGRGAFGEVRLCQ------EKKSGNIYAMKKLKKSEMLSRGQVEHV 153
R ++ D L +G GAFG+V L + +K + K+ KS+ + + +
Sbjct: 22 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDL 80
Query: 154 RAERNLLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXX------------- 199
+E ++ + H I+ L + LY+I+EY G++
Sbjct: 81 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPS 140
Query: 200 -----XXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
V+ Y Q +E + IHRD+ N+L+ ++ MK++DFGL +
Sbjct: 141 HNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 255 PLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYS 314
D ++ +GR P
Sbjct: 199 --DIHHIDXXKKT-------------TNGRLPVK-------------------------- 217
Query: 315 TVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM--LVGYPPFYSDDPVTTCRKIV 368
++APE L + Y + D WS G +++E+ L G P Y PV K++
Sbjct: 218 ------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YPGVPVEELFKLL 265
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 16/164 (9%)
Query: 108 FDLLTIIGRGAFGEVRLCQEKKSGNIYA--MKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
F L ++G+G FG VR Q K+ + K+ K+++++ +E E + E
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 166 HCIVKLY-YSFQDAEYLYL-----IMEYLPGGDVXXXXXXX-------XXXXXXVARFYI 212
+ KL S + L I+ ++ GD+ + RF +
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 213 AQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+ +E + N+IHRD+ N +L ++ + ++DFGL + +
Sbjct: 145 DIAC-GMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKI 187
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 62/158 (39%), Gaps = 3/158 (1%)
Query: 99 KRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
+ ++I + +L IG G FG+V N +K + + V +
Sbjct: 5 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 64
Query: 159 LLAEVASHC-IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR-FYIAQSV 216
L H IVKL + +++IME G++ + Y Q
Sbjct: 65 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 123
Query: 217 LAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
A+ + ++HRDI N+L+ N +KL DFGL +
Sbjct: 124 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 161
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 62/158 (39%), Gaps = 3/158 (1%)
Query: 99 KRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
+ ++I + +L IG G FG+V N +K + + V +
Sbjct: 31 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 90
Query: 159 LLAEVASHC-IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR-FYIAQSV 216
L H IVKL + +++IME G++ + Y Q
Sbjct: 91 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 149
Query: 217 LAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
A+ + ++HRDI N+L+ N +KL DFGL +
Sbjct: 150 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 187
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 62/158 (39%), Gaps = 3/158 (1%)
Query: 99 KRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
+ ++I + +L IG G FG+V N +K + + V +
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 159 LLAEVASHC-IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR-FYIAQSV 216
L H IVKL + +++IME G++ + Y Q
Sbjct: 63 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 121
Query: 217 LAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
A+ + ++HRDI N+L+ N +KL DFGL +
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 62/158 (39%), Gaps = 3/158 (1%)
Query: 99 KRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
+ ++I + +L IG G FG+V N +K + + V +
Sbjct: 6 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 65
Query: 159 LLAEVASHC-IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR-FYIAQSV 216
L H IVKL + +++IME G++ + Y Q
Sbjct: 66 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 124
Query: 217 LAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
A+ + ++HRDI N+L+ N +KL DFGL +
Sbjct: 125 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 162
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 26/191 (13%)
Query: 71 LASSDVPEEEQINILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVR----LCQ 126
+AS + P + + ILK ETE+ ++K ++G GAFG V + +
Sbjct: 4 MASGEAPNQALLRILK-----ETEFKKIK-------------VLGSGAFGTVYKGLWIPE 45
Query: 127 EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIME 186
+K A+K+L+ E S + + E ++A V + + +L + LI +
Sbjct: 46 GEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL-GICLTSTVQLITQ 102
Query: 187 YLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHM 245
+P G + + Q + + +HRD+ N+L+ H+
Sbjct: 103 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV 162
Query: 246 KLSDFGLCKPL 256
K++DFGL K L
Sbjct: 163 KITDFGLAKLL 173
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 3/156 (1%)
Query: 101 HKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLL 160
++I + +L IG G FG+V N +K + + V + L
Sbjct: 2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALT 61
Query: 161 AEVASHC-IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR-FYIAQSVLA 218
H IVKL + +++IME G++ + Y Q A
Sbjct: 62 MRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 120
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+ + ++HRDI N+L+ N +KL DFGL +
Sbjct: 121 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 156
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 62/158 (39%), Gaps = 3/158 (1%)
Query: 99 KRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
+ ++I + +L IG G FG+V N +K + + V +
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 62
Query: 159 LLAEVASHC-IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR-FYIAQSV 216
L H IVKL + +++IME G++ + Y Q
Sbjct: 63 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 121
Query: 217 LAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
A+ + ++HRDI N+L+ N +KL DFGL +
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 62/158 (39%), Gaps = 3/158 (1%)
Query: 99 KRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
+ ++I + +L IG G FG+V N +K + + V +
Sbjct: 8 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 67
Query: 159 LLAEVASHC-IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR-FYIAQSV 216
L H IVKL + +++IME G++ + Y Q
Sbjct: 68 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 126
Query: 217 LAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
A+ + ++HRDI N+L+ N +KL DFGL +
Sbjct: 127 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 164
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
DD++++ +GRG + EV + N+ +K + + + R + L +
Sbjct: 31 DDYEVVRKVGRGKYSEVF-----EGINVNNNEKCIIKILKPVKKKKIKREIKILQNLMGG 85
Query: 166 HCIVKLYYSFQD--AEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
IVKL +D ++ LI EY+ D R+YI + + A++ H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 142
Query: 224 KHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCK 254
+HRD+KP N+++D ++L D+GL +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 174
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 26/189 (13%)
Query: 73 SSDVPEEEQINILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVR----LCQEK 128
S + P + + ILK ETE+ ++K ++G GAFG V + + +
Sbjct: 4 SGEAPNQALLRILK-----ETEFKKIK-------------VLGSGAFGTVYKGLWIPEGE 45
Query: 129 KSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYL 188
K A+K+L+ E S + + E ++A V + + +L + LIM+ +
Sbjct: 46 KVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL-GICLTSTVQLIMQLM 102
Query: 189 PGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKL 247
P G + + Q + + +HRD+ N+L+ H+K+
Sbjct: 103 PFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 162
Query: 248 SDFGLCKPL 256
+DFGL K L
Sbjct: 163 TDFGLAKLL 171
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 82/193 (42%), Gaps = 19/193 (9%)
Query: 71 LASSDVPEEEQINILKDLE-RKETEYMRLKRHKI---SVDDFDLLTIIGRGAFGEV---- 122
L S P + + D+ + EY + H + + DD+ L+ +GRG + EV
Sbjct: 3 LGSMSGPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAI 62
Query: 123 RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLY 182
+ +K KK +E++R N++ IVK S A
Sbjct: 63 NITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLAD---IVKDPVSRTPA---- 115
Query: 183 LIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLD-Q 241
L+ E++ D RFY+ + + A++ H +HRD+KP N+++D +
Sbjct: 116 LVFEHVNNTDFKQLYQTLTDYD---IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 172
Query: 242 NGHMKLSDFGLCK 254
+ ++L D+GL +
Sbjct: 173 HRKLRLIDWGLAE 185
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 26/189 (13%)
Query: 73 SSDVPEEEQINILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVR----LCQEK 128
S + P + + ILK ETE+ ++K ++G GAFG V + + +
Sbjct: 1 SGEAPNQALLRILK-----ETEFKKIK-------------VLGSGAFGTVYKGLWIPEGE 42
Query: 129 KSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYL 188
K A+K+L+ E S + + E ++A V + + +L + LIM+ +
Sbjct: 43 KVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL-GICLTSTVQLIMQLM 99
Query: 189 PGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKL 247
P G + + Q + + +HRD+ N+L+ H+K+
Sbjct: 100 PFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 159
Query: 248 SDFGLCKPL 256
+DFGL K L
Sbjct: 160 TDFGLAKLL 168
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
DD++++ +GRG + EV + N+ +K + + + R + L
Sbjct: 32 DDYEVVRKVGRGKYSEVF-----EGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGG 86
Query: 166 HCIVKLYYSFQD--AEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
IVKL +D ++ LI EY+ D R+YI + + A++ H
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 143
Query: 224 KHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCK 254
+HRD+KP N+++D ++L D+GL +
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 175
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 104/294 (35%), Gaps = 75/294 (25%)
Query: 100 RHKISVDDFDLLTIIGRGAFGEVRLCQ------EKKSGNIYAMKKLKKSEMLSRGQVEHV 153
R ++ D L +G GAFG+V L + +K + K+ KS+ + + +
Sbjct: 22 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDL 80
Query: 154 RAERNLLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXX------------- 199
+E ++ + H I+ L + LY+I+EY G++
Sbjct: 81 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPS 140
Query: 200 -----XXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
V+ Y Q +E + IHRD+ N+L+ ++ MK++DFGL +
Sbjct: 141 HNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 255 PLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYS 314
+ + +GR P +W
Sbjct: 199 DIHHIDY---------------YKKTTNGRLP-----VKW-------------------- 218
Query: 315 TVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIV 368
+APE L + Y + D WS G +++E+ Y PV K++
Sbjct: 219 -------MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 265
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 107/296 (36%), Gaps = 79/296 (26%)
Query: 100 RHKISVDDFDLLTIIGRGAFGEVRLCQ------EKKSGNIYAMKKLKKSEMLSRGQVEHV 153
R ++ D L +G GAFG+V L + +K + K+ KS+ + + +
Sbjct: 63 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDL 121
Query: 154 RAERNLLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXX------------- 199
+E ++ + H I+ L + LY+I+EY G++
Sbjct: 122 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 181
Query: 200 -----XXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
V+ Y Q +E + IHRD+ N+L+ ++ MK++DFGL +
Sbjct: 182 HNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239
Query: 255 PLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYS 314
+ + +GR P +W
Sbjct: 240 DIHHID---------------YYKKTTNGRLP-----VKW-------------------- 259
Query: 315 TVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM--LVGYPPFYSDDPVTTCRKIV 368
+APE L + Y + D WS G +++E+ L G P Y PV K++
Sbjct: 260 -------MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YPGVPVEELFKLL 306
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 102/282 (36%), Gaps = 76/282 (26%)
Query: 100 RHKISVDDFDLLTIIGRGAFGEVRLCQ------EKKSGNIYAMKKLKKSEMLSRGQVEHV 153
R ++ D L +G GAFG+V L + +K + K+ KS+ + + +
Sbjct: 14 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDL 72
Query: 154 RAERNLLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXX------------- 199
+E ++ + H I+ L + LY+I+EY G++
Sbjct: 73 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 132
Query: 200 -----XXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
V+ Y Q +E + IHRD+ N+L+ ++ MK++DFGL +
Sbjct: 133 HNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
Query: 255 PLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYS 314
+ + +GR P +W
Sbjct: 191 DIHHIDY---------------YKKTTNGRLP-----VKW-------------------- 210
Query: 315 TVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-VGYPPF 355
+APE L + Y + D WS G +++E+ +G P+
Sbjct: 211 -------MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 245
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 102/282 (36%), Gaps = 76/282 (26%)
Query: 100 RHKISVDDFDLLTIIGRGAFGEVRLCQ------EKKSGNIYAMKKLKKSEMLSRGQVEHV 153
R ++ D L +G GAFG+V L + +K + K+ KS+ + + +
Sbjct: 11 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDL 69
Query: 154 RAERNLLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXX------------- 199
+E ++ + H I+ L + LY+I+EY G++
Sbjct: 70 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 129
Query: 200 -----XXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
V+ Y Q +E + IHRD+ N+L+ ++ MK++DFGL +
Sbjct: 130 HNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
Query: 255 PLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYS 314
+ + +GR P +W
Sbjct: 188 DIHHIDY---------------YKKTTNGRLP-----VKW-------------------- 207
Query: 315 TVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-VGYPPF 355
+APE L + Y + D WS G +++E+ +G P+
Sbjct: 208 -------MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 242
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 102/282 (36%), Gaps = 76/282 (26%)
Query: 100 RHKISVDDFDLLTIIGRGAFGEVRLCQ------EKKSGNIYAMKKLKKSEMLSRGQVEHV 153
R ++ D L +G GAFG+V L + +K + K+ KS+ + + +
Sbjct: 15 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDL 73
Query: 154 RAERNLLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXX------------- 199
+E ++ + H I+ L + LY+I+EY G++
Sbjct: 74 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 133
Query: 200 -----XXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
V+ Y Q +E + IHRD+ N+L+ ++ MK++DFGL +
Sbjct: 134 HNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
Query: 255 PLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYS 314
+ + +GR P +W
Sbjct: 192 DIHHIDY---------------YKKTTNGRLP-----VKW-------------------- 211
Query: 315 TVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-VGYPPF 355
+APE L + Y + D WS G +++E+ +G P+
Sbjct: 212 -------MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 246
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
DD++++ +GRG + EV + N+ +K + + + R + L
Sbjct: 33 DDYEVVRKVGRGKYSEVF-----EGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGG 87
Query: 166 HCIVKLYYSFQD--AEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
IVKL +D ++ LI EY+ D R+YI + + A++ H
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 144
Query: 224 KHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCK 254
+HRD+KP N+++D ++L D+GL +
Sbjct: 145 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 176
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 104/294 (35%), Gaps = 75/294 (25%)
Query: 100 RHKISVDDFDLLTIIGRGAFGEVRLCQ------EKKSGNIYAMKKLKKSEMLSRGQVEHV 153
R ++ D L +G GAFG+V L + +K + K+ KS+ + + +
Sbjct: 22 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDL 80
Query: 154 RAERNLLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXX------------- 199
+E ++ + H I+ L + LY+I+EY G++
Sbjct: 81 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 140
Query: 200 -----XXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
V+ Y Q +E + IHRD+ N+L+ ++ MK++DFGL +
Sbjct: 141 HNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 255 PLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYS 314
+ + +GR P +W
Sbjct: 199 DIHHIDY---------------YKKTTNGRLP-----VKW-------------------- 218
Query: 315 TVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIV 368
+APE L + Y + D WS G +++E+ Y PV K++
Sbjct: 219 -------MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 265
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
DD++++ +GRG + EV + N+ +K + + + R + L
Sbjct: 31 DDYEVVRKVGRGKYSEVF-----EGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 166 HCIVKLYYSFQD--AEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
IVKL +D ++ LI EY+ D R+YI + + A++ H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 142
Query: 224 KHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCK 254
+HRD+KP N+++D ++L D+GL +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 174
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 101/282 (35%), Gaps = 76/282 (26%)
Query: 100 RHKISVDDFDLLTIIGRGAFGEVRLCQ------EKKSGNIYAMKKLKKSEMLSRGQVEHV 153
R ++ D L +G GAFG+V L + +K + K+ KS+ + + +
Sbjct: 7 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDL 65
Query: 154 RAERNLLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXX------------- 199
+E ++ + H I+ L + LY+I+EY G++
Sbjct: 66 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPS 125
Query: 200 -----XXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
V+ Y Q +E + IHRD+ N+L+ ++ MK++DFGL +
Sbjct: 126 HNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
Query: 255 PLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYS 314
+ + +GR P
Sbjct: 184 DIHHID---------------YYKKTTNGRLPVK-------------------------- 202
Query: 315 TVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-VGYPPF 355
++APE L + Y + D WS G +++E+ +G P+
Sbjct: 203 ------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 238
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 27/46 (58%)
Query: 209 RFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
++++ +L + +H+ +HRD+ P N+LL N + + DF L +
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
DD++++ +GRG + EV + N+ +K + + + R + L
Sbjct: 52 DDYEVVRKVGRGKYSEVF-----EGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGG 106
Query: 166 HCIVKLYYSFQD--AEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
IVKL +D ++ LI EY+ D R+YI + + A++ H
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 163
Query: 224 KHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCK 254
+HRD+KP N+++D ++L D+GL +
Sbjct: 164 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 195
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
DD++++ +GRG + EV + N+ +K + + + R + L
Sbjct: 31 DDYEVVRKVGRGKYSEVF-----EGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGG 85
Query: 166 HCIVKLYYSFQD--AEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
IVKL +D ++ LI EY+ D R+YI + + A++ H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 142
Query: 224 KHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCK 254
+HRD+KP N+++D ++L D+GL +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 174
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 64/162 (39%), Gaps = 20/162 (12%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQV---EHVRAERNLLAEVASH-CIV 169
+G GAFG+V G A+ K+ + S E + +E +++ + H IV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 170 KLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI------- 222
L + + +I EY GD+ F IA S + +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173
Query: 223 -------HKHNYIHRDIKPDNLLLDQNGHM-KLSDFGLCKPL 256
N IHRD+ N+LL NGH+ K+ DFGL + +
Sbjct: 174 AQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLARDI 214
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
DD++++ +GRG + EV + N+ +K + + + R + L
Sbjct: 32 DDYEVVRKVGRGKYSEVF-----EGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGG 86
Query: 166 HCIVKLYYSFQD--AEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
IVKL +D ++ LI EY+ D R+YI + + A++ H
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 143
Query: 224 KHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCK 254
+HRD+KP N+++D ++L D+GL +
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 175
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
DD++++ +GRG + EV + N+ +K + + + R + L
Sbjct: 31 DDYEVVRKVGRGKYSEVF-----EGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGG 85
Query: 166 HCIVKLYYSFQD--AEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
IVKL +D ++ LI EY+ D R+YI + + A++ H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 142
Query: 224 KHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCK 254
+HRD+KP N+++D ++L D+GL +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 174
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 106 DDFDLLTIIGRGAFGEV----RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
DD+ L+ +GRG + EV + +K KK +E++R N++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
IVK S A L+ E++ D RFY+ + + A++
Sbjct: 97 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQTLTDYD---IRFYMYEILKALDY 146
Query: 222 IHKHNYIHRDIKPDNLLLD-QNGHMKLSDFGLCK 254
H +HRD+KP N+++D ++ ++L D+GL +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
DD++++ +GRG + EV + N+ +K + + + R + L
Sbjct: 31 DDYEVVRKVGRGKYSEVF-----EGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 166 HCIVKLYYSFQD--AEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
IVKL +D ++ LI EY+ D R+YI + + A++ H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 142
Query: 224 KHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCK 254
+HRD+KP N+++D ++L D+GL +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 174
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVAS 165
DD++++ +GRG + EV + N+ +K + + + R + L
Sbjct: 31 DDYEVVRKVGRGKYSEVF-----EGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 166 HCIVKLYYSFQD--AEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESIH 223
IVKL +D ++ LI EY+ D R+YI + + A++ H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 142
Query: 224 KHNYIHRDIKPDNLLLDQN-GHMKLSDFGLCK 254
+HRD+KP N+++D ++L D+GL +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 174
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 106 DDFDLLTIIGRGAFGEV----RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
DD+ L+ +GRG + EV + +K KK +E++R N++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
IVK S A L+ E++ D RFY+ + + A++
Sbjct: 97 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLRQTLTDYD---IRFYMYEILKALDY 146
Query: 222 IHKHNYIHRDIKPDNLLLD-QNGHMKLSDFGLCK 254
H +HRD+KP N+++D ++ ++L D+GL +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 62/158 (39%), Gaps = 3/158 (1%)
Query: 99 KRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
+ ++I + +L IG G FG+V N +K + + V +
Sbjct: 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 442
Query: 159 LLAEVASHC-IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR-FYIAQSV 216
L H IVKL + +++IME G++ + Y Q
Sbjct: 443 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS 501
Query: 217 LAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
A+ + ++HRDI N+L+ N +KL DFGL +
Sbjct: 502 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 539
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 102/282 (36%), Gaps = 76/282 (26%)
Query: 100 RHKISVDDFDLLTIIGRGAFGEVRLCQ------EKKSGNIYAMKKLKKSEMLSRGQVEHV 153
R ++ D L +G GAFG+V L + +K + K+ KS+ + + +
Sbjct: 22 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDL 80
Query: 154 RAERNLLAEVASH-CIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXX------------- 199
+E ++ + H I+ L + LY+I+EY G++
Sbjct: 81 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPS 140
Query: 200 -----XXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
V+ Y Q +E + IHRD+ N+L+ ++ MK++DFGL +
Sbjct: 141 HNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 255 PLDCTNLSAIXXXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYS 314
+ + +GR P +W
Sbjct: 199 DIHHID---------------YYKKTTNGRLP-----VKW-------------------- 218
Query: 315 TVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-VGYPPF 355
+APE L + Y + D WS G +++E+ +G P+
Sbjct: 219 -------MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 106 DDFDLLTIIGRGAFGEV----RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
DD+ L+ +GRG + EV + +K KK +E++R N++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
IVK S A L+ E++ D RFY+ + + A++
Sbjct: 97 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQTLTDYD---IRFYMYEILKALDY 146
Query: 222 IHKHNYIHRDIKPDNLLLD-QNGHMKLSDFGLCK 254
H +HRD+KP N+++D ++ ++L D+GL +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 106 DDFDLLTIIGRGAFGEV----RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
DD+ L+ +GRG + EV + +K KK +E++R N++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
IVK S A L+ E++ D RFY+ + + A++
Sbjct: 97 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQTLTDYD---IRFYMYEILKALDY 146
Query: 222 IHKHNYIHRDIKPDNLLLD-QNGHMKLSDFGLCK 254
H +HRD+KP N+++D ++ ++L D+GL +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 106 DDFDLLTIIGRGAFGEV----RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
DD+ L+ +GRG + EV + +K KK +E++R N++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
IVK S A L+ E++ D RFY+ + + A++
Sbjct: 97 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQTLTDYD---IRFYMYEILKALDY 146
Query: 222 IHKHNYIHRDIKPDNLLLD-QNGHMKLSDFGLCK 254
H +HRD+KP N+++D ++ ++L D+GL +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 106 DDFDLLTIIGRGAFGEV----RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
DD+ L+ +GRG + EV + +K KK +E++R N++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
IVK S A L+ E++ D RFY+ + + A++
Sbjct: 97 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQTLTDYD---IRFYMYEILKALDY 146
Query: 222 IHKHNYIHRDIKPDNLLLD-QNGHMKLSDFGLCK 254
H +HRD+KP N+++D ++ ++L D+GL +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 106 DDFDLLTIIGRGAFGEV----RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
DD+ L+ +GRG + EV + +K KK +E++R N++
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 95
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
IVK S A L+ E++ D RFY+ + + A++
Sbjct: 96 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQTLTDYD---IRFYMYEILKALDY 145
Query: 222 IHKHNYIHRDIKPDNLLLD-QNGHMKLSDFGLCK 254
H +HRD+KP N+++D ++ ++L D+GL +
Sbjct: 146 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 106 DDFDLLTIIGRGAFGEV----RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
DD+ L+ +GRG + EV + +K KK +E++R N++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
IVK S A L+ E++ D RFY+ + + A++
Sbjct: 97 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQTLTDYD---IRFYMYEILKALDY 146
Query: 222 IHKHNYIHRDIKPDNLLLD-QNGHMKLSDFGLCK 254
H +HRD+KP N+++D ++ ++L D+GL +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 106 DDFDLLTIIGRGAFGEV----RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
DD+ L+ +GRG + EV + +K KK +E++R N++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
IVK S A L+ E++ D RFY+ + + A++
Sbjct: 97 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQTLTDYD---IRFYMYEILKALDY 146
Query: 222 IHKHNYIHRDIKPDNLLLD-QNGHMKLSDFGLCK 254
H +HRD+KP N+++D ++ ++L D+GL +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 106 DDFDLLTIIGRGAFGEV----RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
DD+ L+ +GRG + EV + +K KK +E++R N++
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 94
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
IVK S A L+ E++ D RFY+ + + A++
Sbjct: 95 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQTLTDYD---IRFYMYEILKALDY 144
Query: 222 IHKHNYIHRDIKPDNLLLD-QNGHMKLSDFGLCK 254
H +HRD+KP N+++D ++ ++L D+GL +
Sbjct: 145 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 178
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 106 DDFDLLTIIGRGAFGEV----RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
DD+ L+ +GRG + EV + +K KK +E++R N++
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 95
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
IVK S A L+ E++ D RFY+ + + A++
Sbjct: 96 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQTLTDYD---IRFYMYEILKALDY 145
Query: 222 IHKHNYIHRDIKPDNLLLD-QNGHMKLSDFGLCK 254
H +HRD+KP N+++D ++ ++L D+GL +
Sbjct: 146 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 106 DDFDLLTIIGRGAFGEV----RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLA 161
DD+ L+ +GRG + EV + +K KK +E++R N++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 162 EVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIES 221
IVK S A L+ E++ D RFY+ + + A++
Sbjct: 97 LAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQTLTDYD---IRFYMYEILKALDY 146
Query: 222 IHKHNYIHRDIKPDNLLLD-QNGHMKLSDFGLCK 254
H +HRD+KP N+++D ++ ++L D+GL +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%), Gaps = 6/48 (12%)
Query: 213 AQSVLA-IESIHKHNYIHRDIKPDNLLL----DQNGHM-KLSDFGLCK 254
A+ +LA ++SIH+ + ++RDIKPDN L+ +N +M + DFG+ K
Sbjct: 112 AKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%), Gaps = 6/48 (12%)
Query: 213 AQSVLA-IESIHKHNYIHRDIKPDNLLL----DQNGHM-KLSDFGLCK 254
A+ +LA ++SIH+ + ++RDIKPDN L+ +N +M + DFG+ K
Sbjct: 111 AKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 158
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 80/196 (40%), Gaps = 24/196 (12%)
Query: 66 VLERKLASSDVPEEEQINILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVR-- 123
++E S P + Q+ ILK ETE R+K ++G GAFG V
Sbjct: 16 LVEPLTPSGTAPNQAQLRILK-----ETELKRVK-------------VLGSGAFGTVYKG 57
Query: 124 -LCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLY 182
E ++ I K+ + VE + E ++A + +V+L + +
Sbjct: 58 IWVPEGETVKIPVAIKILNETTGPKANVEFMD-EALIMASMDHPHLVRLL-GVCLSPTIQ 115
Query: 183 LIMEYLPGGDVXX-XXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQ 241
L+ + +P G + + + Q + + + +HRD+ N+L+
Sbjct: 116 LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKS 175
Query: 242 NGHMKLSDFGLCKPLD 257
H+K++DFGL + L+
Sbjct: 176 PNHVKITDFGLARLLE 191
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 59/148 (39%), Gaps = 46/148 (31%)
Query: 214 QSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXXXXX 273
Q +E + + ++HRD+ N +LD++ +K++DFGL +
Sbjct: 132 QVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLAR------------------- 172
Query: 274 XXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYG 333
D+ R +++ + + + A V + A E L +
Sbjct: 173 ------DILDR-----------------EYYSVQQHRHARLPV---KWTALESLQTYRFT 206
Query: 334 MECDWWSLGAIMYEMLV-GYPPFYSDDP 360
+ D WS G +++E+L G PP+ DP
Sbjct: 207 TKSDVWSFGVLLWELLTRGAPPYRHIDP 234
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 33/165 (20%)
Query: 107 DFDLLTIIGRGAFGEV---RLCQEKKSGNIYAMKK----LKKSEMLSRGQVEHVRAERNL 159
D LL +G+G +GEV E + I++ + +++E+ + + H N+
Sbjct: 9 DITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRH----ENI 64
Query: 160 LAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAI 219
L +AS S + L+LI Y G + R VL+I
Sbjct: 65 LGFIASDMT-----SRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRI-----VLSI 114
Query: 220 ESIHKHNYI------------HRDIKPDNLLLDQNGHMKLSDFGL 252
S H +I HRD+K N+L+ +NG ++D GL
Sbjct: 115 ASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 159
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 107 DFDLLTIIGRGAFGEVR----LCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE 162
+F + ++G GAFG V + + +K A+K+L+ E S + + E ++A
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMAS 76
Query: 163 VASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIES 221
V + + +L + LIM+ +P G + + Q +
Sbjct: 77 VDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+ +HRD+ N+L+ H+K++DFGL K L
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 211 YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
Y Q +E + IHRD+ N+LL +N +K+ DFGL +
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLAR 247
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 107 DFDLLTIIGRGAFGEVR----LCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE 162
+F + ++G GAFG V + + +K A+K+L+ E S + + E ++A
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMAS 73
Query: 163 VASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIES 221
V + + +L + LIM+ +P G + + Q +
Sbjct: 74 VDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+ +HRD+ N+L+ H+K++DFGL K L
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 26/190 (13%)
Query: 72 ASSDVPEEEQINILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVR----LCQE 127
S + P + + ILK ETE+ ++K ++G GAFG V + +
Sbjct: 1 GSGEAPNQALLRILK-----ETEFKKIK-------------VLGSGAFGTVYKGLWIPEG 42
Query: 128 KKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEY 187
+K A+K+L+ E S + + E ++A V + + +L + LI +
Sbjct: 43 EKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL-GICLTSTVQLITQL 99
Query: 188 LPGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMK 246
+P G + + Q + + +HRD+ N+L+ H+K
Sbjct: 100 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVK 159
Query: 247 LSDFGLCKPL 256
++DFGL K L
Sbjct: 160 ITDFGLAKLL 169
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 26/190 (13%)
Query: 72 ASSDVPEEEQINILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVR----LCQE 127
S + P + + ILK ETE+ ++K ++G GAFG V + +
Sbjct: 24 GSGEAPNQALLRILK-----ETEFKKIK-------------VLGSGAFGTVYKGLWIPEG 65
Query: 128 KKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEY 187
+K A+K+L+ E S + + E ++A V + + +L + LI +
Sbjct: 66 EKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL-GICLTSTVQLITQL 122
Query: 188 LPGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMK 246
+P G + + Q + + +HRD+ N+L+ H+K
Sbjct: 123 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVK 182
Query: 247 LSDFGLCKPL 256
++DFGL K L
Sbjct: 183 ITDFGLAKLL 192
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 51/150 (34%)
Query: 212 IAQSVLAIESIHKHNYIHRDIKPDNLLL----DQNGHMKLSDFGLCKPLDCTNLSAIXXX 267
+ Q + I +H + +HRD+KP N+L+ + G +K++D G
Sbjct: 134 LYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF--------------- 178
Query: 268 XXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVL 327
R + SPL+ L V T Y APE+L
Sbjct: 179 -----------------------ARLFNSPLKPLADLD--------PVVVTFWYRAPELL 207
Query: 328 L-KKGYGMECDWWSLGAIMYEMLVGYPPFY 356
L + Y D W++G I E+L P F+
Sbjct: 208 LGARHYTKAIDIWAIGCIFAELLTSEPIFH 237
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 61/158 (38%), Gaps = 3/158 (1%)
Query: 99 KRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
+ ++I + +L IG G FG+V N +K + + V +
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 159 LLAEVASHC-IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR-FYIAQSV 216
L H IVKL + +++IME G++ + Y Q
Sbjct: 63 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS 121
Query: 217 LAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
A+ + ++HRDI N+L+ +KL DFGL +
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSR 159
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 26/191 (13%)
Query: 71 LASSDVPEEEQINILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVR----LCQ 126
+ S + P + + ILK ETE+ ++K ++G GAFG V + +
Sbjct: 5 IRSGEAPNQALLRILK-----ETEFKKIK-------------VLGSGAFGTVYKGLWIPE 46
Query: 127 EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIME 186
+K A+K+L+ E S + + E ++A V + + +L + LI +
Sbjct: 47 GEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL-GICLTSTVQLITQ 103
Query: 187 YLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHM 245
+P G + + Q + + +HRD+ N+L+ H+
Sbjct: 104 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV 163
Query: 246 KLSDFGLCKPL 256
K++DFGL K L
Sbjct: 164 KITDFGLAKLL 174
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 112/322 (34%), Gaps = 101/322 (31%)
Query: 103 ISVDDFDLLTIIGRGAFGEV---RLCQEKKSGNIYAMKK----LKKSEMLSRGQVEHVRA 155
+ +D+ LL +IGRG +G V L + + +++ + + + +EH
Sbjct: 10 LDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNI 69
Query: 156 ERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQS 215
R ++ + ++ EYL L+MEY P G + R +A S
Sbjct: 70 ARFIVGDERVTADGRM-------EYL-LVMEYYPNGSLXKYLSLHTSDWVSSCR--LAHS 119
Query: 216 VL-AIESIH---------KHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIX 265
V + +H K HRD+ N+L+ +G +SDFGL L
Sbjct: 120 VTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRL--------- 170
Query: 266 XXXXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPE 325
G R P E+ A S VGT Y+APE
Sbjct: 171 ------------------------TGNRLVRPGEE--------DNAAISEVGTIRYMAPE 198
Query: 326 VL-----LKKGYGM--ECDWWSLGAIMYEML----------------------VGYPPFY 356
VL L+ + D ++LG I +E+ VG P +
Sbjct: 199 VLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTF 258
Query: 357 SDDPVTTCRKIVHWKNHLKFPE 378
D V R+ K KFPE
Sbjct: 259 EDMQVLVSRE----KQRPKFPE 276
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 26/190 (13%)
Query: 72 ASSDVPEEEQINILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVR----LCQE 127
S + P + + ILK ETE+ ++K ++G GAFG V + +
Sbjct: 1 GSGEAPNQALLRILK-----ETEFKKIK-------------VLGSGAFGTVYKGLWIPEG 42
Query: 128 KKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEY 187
+K A+K+L+ E S + + E ++A V + + +L + LIM+
Sbjct: 43 EKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL-GICLTSTVQLIMQL 99
Query: 188 LPGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMK 246
+P G + + Q + + +HRD+ N+L+ H+K
Sbjct: 100 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVK 159
Query: 247 LSDFGLCKPL 256
++DFG K L
Sbjct: 160 ITDFGRAKLL 169
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 26/190 (13%)
Query: 72 ASSDVPEEEQINILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVR----LCQE 127
S + P + + ILK ETE+ ++K ++G GAFG V + +
Sbjct: 1 GSGEAPNQALLRILK-----ETEFKKIK-------------VLGSGAFGTVYKGLWIPEG 42
Query: 128 KKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEY 187
+K A+K+L+ E S + + E ++A V + + +L + LIM+
Sbjct: 43 EKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL-GICLTSTVQLIMQL 99
Query: 188 LPGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMK 246
+P G + + Q + + +HRD+ N+L+ H+K
Sbjct: 100 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVK 159
Query: 247 LSDFGLCKPL 256
++DFG K L
Sbjct: 160 ITDFGRAKLL 169
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 26/191 (13%)
Query: 71 LASSDVPEEEQINILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVR----LCQ 126
+ S + P + + ILK ETE+ ++K ++ GAFG V + +
Sbjct: 5 IRSGEAPNQALLRILK-----ETEFKKIK-------------VLSSGAFGTVYKGLWIPE 46
Query: 127 EKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIME 186
+K A+K+L+ E S + + E ++A V + + +L + LIM+
Sbjct: 47 GEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL-GICLTSTVQLIMQ 103
Query: 187 YLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHM 245
+P G + + Q + + +HRD+ N+L+ H+
Sbjct: 104 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV 163
Query: 246 KLSDFGLCKPL 256
K++DFGL K L
Sbjct: 164 KITDFGLAKLL 174
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNG--HMKLSDFGLC 253
+E IH+H Y+H DIK NLLL+ + L D+GL
Sbjct: 165 LEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 65/156 (41%), Gaps = 15/156 (9%)
Query: 113 IIGRGAFGEV---RLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIV 169
I+G G FG V L QE + A+K +K S+ ++E +E + + + ++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS-SQREIEEFLSEAACMKDFSHPNVI 99
Query: 170 KLY-----YSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXX------XXVARFYIAQSVLA 218
+L S Q +I+ ++ GD+ ++ L
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
+E + N++HRD+ N +L + + ++DFGL K
Sbjct: 160 MEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSK 195
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 26/190 (13%)
Query: 72 ASSDVPEEEQINILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVR----LCQE 127
A + P + + ILK ETE+ ++K ++G GAFG V + +
Sbjct: 2 AMGEAPNQALLRILK-----ETEFKKIK-------------VLGSGAFGTVYKGLWIPEG 43
Query: 128 KKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEY 187
+K A+K+L+ E S + + E ++A V + + +L + LI +
Sbjct: 44 EKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL-GICLTSTVQLITQL 100
Query: 188 LPGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMK 246
+P G + + Q + + +HRD+ N+L+ H+K
Sbjct: 101 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVK 160
Query: 247 LSDFGLCKPL 256
++DFGL K L
Sbjct: 161 ITDFGLAKLL 170
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 228 IHRDIKPDNLLLDQNGHMKLSDFGLCKPLD 257
+HRD+ N+L+ H+K++DFGL + LD
Sbjct: 141 VHRDLAARNVLVKSPNHVKITDFGLARLLD 170
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 98/269 (36%), Gaps = 67/269 (24%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQV--EH--VRAERNLLA 161
D +L +GRGAFG+V + + + A + +ML G EH + +E +L
Sbjct: 27 DRLNLGKPLGRGAFGQV-IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILI 85
Query: 162 EVASHC-IVKLYYS-FQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY-------- 211
+ H +V L + + L +I+E+ G++ Y
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 212 ----IAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXX 267
Q +E + IHRD+ N+LL + +K+ DFGL +
Sbjct: 146 LIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLAR------------- 192
Query: 268 XXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVL 327
+ D + G R PL+ ++APE +
Sbjct: 193 ----------DIYKDPDYVRKGDARL---PLK---------------------WMAPETI 218
Query: 328 LKKGYGMECDWWSLGAIMYEML-VGYPPF 355
+ Y ++ D WS G +++E+ +G P+
Sbjct: 219 FDRVYTIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 26/190 (13%)
Query: 72 ASSDVPEEEQINILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVR----LCQE 127
A + P + + ILK ETE+ ++K ++G GAFG V + +
Sbjct: 2 AMGEAPNQALLRILK-----ETEFKKIK-------------VLGSGAFGTVYKGLWIPEG 43
Query: 128 KKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEY 187
+K A+K+L+ E S + + E ++A V + + +L + LI +
Sbjct: 44 EKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL-GICLTSTVQLITQL 100
Query: 188 LPGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMK 246
+P G + + Q + + +HRD+ N+L+ H+K
Sbjct: 101 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVK 160
Query: 247 LSDFGLCKPL 256
++DFGL K L
Sbjct: 161 ITDFGLAKLL 170
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNG--HMKLSDFGLC 253
+E IH+H Y+H DIK NLLL+ + L D+GL
Sbjct: 165 LEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 219 IESIHKHNYIHRDIKPDNLLLDQNG--HMKLSDFGLC 253
+E IH+H Y+H DIK NLLL+ + L D+GL
Sbjct: 165 LEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 96/269 (35%), Gaps = 67/269 (24%)
Query: 106 DDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQV--EH--VRAERNLLA 161
D +L +GRGAFG+V + + + A + +ML G EH + +E +L
Sbjct: 27 DRLNLGKPLGRGAFGQV-IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILI 85
Query: 162 EVASHCIVK--LYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFY-------- 211
+ H V L + L +I+E+ G++ Y
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 212 ----IAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXX 267
Q +E + IHRD+ N+LL + +K+ DFGL +
Sbjct: 146 LICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR------------- 192
Query: 268 XXXXXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVL 327
+ D + G R PL+ ++APE +
Sbjct: 193 ----------DIYKDPDYVRKGDARL---PLK---------------------WMAPETI 218
Query: 328 LKKGYGMECDWWSLGAIMYEML-VGYPPF 355
+ Y ++ D WS G +++E+ +G P+
Sbjct: 219 FDRVYTIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
Query: 107 DFDLLTIIGRGAFGEVR----LCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE 162
+F + ++G GAFG V + + +K A+K+L+ E S + + E ++A
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMAS 73
Query: 163 VASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIES 221
V + + +L + LI + +P G + + Q +
Sbjct: 74 VDNPHVCRLL-GICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+ +HRD+ N+L+ H+K++DFGL K L
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 61/158 (38%), Gaps = 3/158 (1%)
Query: 99 KRHKISVDDFDLLTIIGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERN 158
+ ++I + +L IG G FG+V N +K + + V +
Sbjct: 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 442
Query: 159 LLAEVASHC-IVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR-FYIAQSV 216
L H IVKL + +++IME G++ + Y Q
Sbjct: 443 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS 501
Query: 217 LAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCK 254
A+ + ++HRDI N+L+ +KL DFGL +
Sbjct: 502 TALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSR 539
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 24/185 (12%)
Query: 77 PEEEQINILKDLERKETEYMRLKRHKISVDDFDLLTIIGRGAFGEVR---LCQEKKSGNI 133
P + Q+ ILK ETE R+K ++G GAFG V E ++ I
Sbjct: 4 PNQAQLRILK-----ETELKRVK-------------VLGSGAFGTVYKGIWVPEGETVKI 45
Query: 134 YAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDV 193
K+ + VE + E ++A + +V+L + + L+ + +P G +
Sbjct: 46 PVAIKILNETTGPKANVEFMD-EALIMASMDHPHLVRLL-GVCLSPTIQLVTQLMPHGCL 103
Query: 194 XX-XXXXXXXXXXXVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGL 252
+ + Q + + + +HRD+ N+L+ H+K++DFGL
Sbjct: 104 LEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGL 163
Query: 253 CKPLD 257
+ L+
Sbjct: 164 ARLLE 168
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 6/142 (4%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG G FG V L + A+K +++ M +E E ++ +++ +V+LY
Sbjct: 15 IGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYG 69
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-AIESIHKHNYIHRDI 232
+ + L+ E++ G + + V + + + + IHRD+
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDL 129
Query: 233 KPDNLLLDQNGHMKLSDFGLCK 254
N L+ +N +K+SDFG+ +
Sbjct: 130 AARNCLVGENQVIKVSDFGMTR 151
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 38/175 (21%)
Query: 97 RLKRHKISVDDFDLLTIIGRGAFGEV---RLCQEKKSGNIYAMKK----LKKSEMLSRGQ 149
R H+I+ LL +G+G +GEV E + I++ + +++E+ +
Sbjct: 4 RTVAHQIT-----LLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVM 58
Query: 150 VEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVAR 209
+ H N+L +AS S + L+LI Y G + R
Sbjct: 59 LRH----ENILGFIASDMT-----SRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR 109
Query: 210 FYIAQSVLAIESIHKHNYI------------HRDIKPDNLLLDQNGHMKLSDFGL 252
VL+I S H +I HRD+K N+L+ +NG ++D GL
Sbjct: 110 I-----VLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 159
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 48/146 (32%)
Query: 211 YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXX 270
Y Q +E + IHRD+ N+LL + +K+ DFGL + +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-------------- 189
Query: 271 XXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKK 330
D R P +W +APE + +
Sbjct: 190 -XKDPDXVRKGDARLP-----LKW---------------------------MAPETIFDR 216
Query: 331 GYGMECDWWSLGAIMYEML-VGYPPF 355
Y ++ D WS G +++E+ +G P+
Sbjct: 217 VYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 51/146 (34%), Gaps = 48/146 (32%)
Query: 211 YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXX 270
Y Q +E + IHRD+ N+LL + +K+ DFGL + +
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-------------- 241
Query: 271 XXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKK 330
D R P +W +APE + +
Sbjct: 242 -YKDPDYVRKGDARLP-----LKW---------------------------MAPETIFDR 268
Query: 331 GYGMECDWWSLGAIMYEML-VGYPPF 355
Y ++ D WS G +++E+ +G P+
Sbjct: 269 VYTIQSDVWSFGVLLWEIFSLGASPY 294
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 211 YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGL 252
Y+ + + ++ HK HRDIK N+LL N ++DFGL
Sbjct: 136 YLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 48/146 (32%)
Query: 211 YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXX 270
Y Q +E + IHRD+ N+LL + +K+ DFGL + +
Sbjct: 153 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDI-------------- 198
Query: 271 XXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKK 330
D R P +W +APE + +
Sbjct: 199 -XKDPDXVRKGDARLP-----LKW---------------------------MAPETIFDR 225
Query: 331 GYGMECDWWSLGAIMYEML-VGYPPF 355
Y ++ D WS G +++E+ +G P+
Sbjct: 226 VYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 48/146 (32%)
Query: 211 YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXX 270
Y Q +E + IHRD+ N+LL + +K+ DFGL + +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-------------- 189
Query: 271 XXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKK 330
D R P +W +APE + +
Sbjct: 190 -XKDPDXVRKGDARLP-----LKW---------------------------MAPETIFDR 216
Query: 331 GYGMECDWWSLGAIMYEML-VGYPPF 355
Y ++ D WS G +++E+ +G P+
Sbjct: 217 VYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 65/162 (40%), Gaps = 33/162 (20%)
Query: 110 LLTIIGRGAFGEV---RLCQEKKSGNIYAMKK----LKKSEMLSRGQVEHVRAERNLLAE 162
LL +G+G +GEV E + I++ + +++E+ + + H N+L
Sbjct: 41 LLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRH----ENILGF 96
Query: 163 VASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVLAIESI 222
+AS S + L+LI Y G + R VL+I S
Sbjct: 97 IASD-----MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRI-----VLSIASG 146
Query: 223 HKHNYI------------HRDIKPDNLLLDQNGHMKLSDFGL 252
H +I HRD+K N+L+ +NG ++D GL
Sbjct: 147 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 188
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 314 STVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDD 359
+++ T +Y +PEVLL +G D WS +++E++ G F D+
Sbjct: 194 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDE 239
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 51/146 (34%), Gaps = 48/146 (32%)
Query: 211 YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXX 270
Y Q +E + IHRD+ N+LL + +K+ DFGL + +
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-------------- 243
Query: 271 XXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKK 330
D R P +W +APE + +
Sbjct: 244 -YKDPDYVRKGDARLP-----LKW---------------------------MAPETIFDR 270
Query: 331 GYGMECDWWSLGAIMYEML-VGYPPF 355
Y ++ D WS G +++E+ +G P+
Sbjct: 271 VYTIQSDVWSFGVLLWEIFSLGASPY 296
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 314 STVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDD 359
+++ T +Y +PEVLL +G D WS +++E++ G F D+
Sbjct: 194 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDE 239
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
Query: 107 DFDLLTIIGRGAFGEVR----LCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE 162
+F + ++G GAFG V + + +K A+K+L+ E S + + E ++A
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMAS 83
Query: 163 VASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIES 221
V + + +L + LI + +P G + + Q +
Sbjct: 84 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 142
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+ +HRD+ N+L+ H+K++DFGL K L
Sbjct: 143 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 177
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 51/146 (34%), Gaps = 48/146 (32%)
Query: 211 YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXX 270
Y Q +E + IHRD+ N+LL + +K+ DFGL + +
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-------------- 248
Query: 271 XXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKK 330
D R P +W +APE + +
Sbjct: 249 -YKDPDYVRKGDARLP-----LKW---------------------------MAPETIFDR 275
Query: 331 GYGMECDWWSLGAIMYEML-VGYPPF 355
Y ++ D WS G +++E+ +G P+
Sbjct: 276 VYTIQSDVWSFGVLLWEIFSLGASPY 301
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
Query: 107 DFDLLTIIGRGAFGEVR----LCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE 162
+F + ++G GAFG V + + +K A+K+L+ E S + + E ++A
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMAS 73
Query: 163 VASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIES 221
V + + +L + LI + +P G + + Q +
Sbjct: 74 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+ +HRD+ N+L+ H+K++DFGL K L
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 51/146 (34%), Gaps = 48/146 (32%)
Query: 211 YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXX 270
Y Q +E + IHRD+ N+LL + +K+ DFGL + +
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-------------- 250
Query: 271 XXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKK 330
D R P +W +APE + +
Sbjct: 251 -YKDPDYVRKGDARLP-----LKW---------------------------MAPETIFDR 277
Query: 331 GYGMECDWWSLGAIMYEML-VGYPPF 355
Y ++ D WS G +++E+ +G P+
Sbjct: 278 VYTIQSDVWSFGVLLWEIFSLGASPY 303
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
Query: 107 DFDLLTIIGRGAFGEVR----LCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE 162
+F + ++G GAFG V + + +K A+K+L+ E S + + E ++A
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMAS 76
Query: 163 VASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIES 221
V + + +L + LI + +P G + + Q +
Sbjct: 77 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+ +HRD+ N+L+ H+K++DFGL K L
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
Query: 107 DFDLLTIIGRGAFGEVR----LCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAE 162
+F + ++G GAFG V + + +K A+K+L+ E S + + E ++A
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMAS 73
Query: 163 VASHCIVKLYYSFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARF-YIAQSVLAIES 221
V + + +L + LI + +P G + + Q +
Sbjct: 74 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 222 IHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPL 256
+ +HRD+ N+L+ H+K++DFGL K L
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 6/142 (4%)
Query: 114 IGRGAFGEVRLCQEKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYY 173
IG G FG V L + A+K +K+ M +E E ++ +++ +V+LY
Sbjct: 35 IGSGQFGLVHLGYWLNKDKV-AIKTIKEGSMSEDDFIE----EAEVMMKLSHPKLVQLYG 89
Query: 174 SFQDAEYLYLIMEYLPGGDVXXXXXXXXXXXXXVARFYIAQSVL-AIESIHKHNYIHRDI 232
+ + L+ E++ G + + V + + + IHRD+
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 149
Query: 233 KPDNLLLDQNGHMKLSDFGLCK 254
N L+ +N +K+SDFG+ +
Sbjct: 150 AARNCLVGENQVIKVSDFGMTR 171
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 51/146 (34%), Gaps = 48/146 (32%)
Query: 211 YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXX 270
Y Q +E + IHRD+ N+LL + +K+ DFGL + +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-------------- 189
Query: 271 XXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKK 330
D R P +W +APE + +
Sbjct: 190 -YKDPDYVRKGDARLP-----LKW---------------------------MAPETIFDR 216
Query: 331 GYGMECDWWSLGAIMYEML-VGYPPF 355
Y ++ D WS G +++E+ +G P+
Sbjct: 217 VYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 51/146 (34%), Gaps = 48/146 (32%)
Query: 211 YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXX 270
Y Q +E + IHRD+ N+LL + +K+ DFGL + +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-------------- 189
Query: 271 XXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKK 330
D R P +W +APE + +
Sbjct: 190 -YKDPDYVRKGDARLP-----LKW---------------------------MAPETIFDR 216
Query: 331 GYGMECDWWSLGAIMYEML-VGYPPF 355
Y ++ D WS G +++E+ +G P+
Sbjct: 217 VYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 48/146 (32%)
Query: 211 YIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCTNLSAIXXXXXX 270
Y Q +E + IHRD+ N+LL + +K+ DFGL + +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-------------- 198
Query: 271 XXXXXXXSMDVDGRFPESGCGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKK 330
D R P +W +APE + +
Sbjct: 199 -XKDPDXVRKGDARLP-----LKW---------------------------MAPETIFDR 225
Query: 331 GYGMECDWWSLGAIMYEML-VGYPPF 355
Y ++ D WS G +++E+ +G P+
Sbjct: 226 VYTIQSDVWSFGVLLWEIFSLGASPY 251
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,253,253
Number of Sequences: 62578
Number of extensions: 622944
Number of successful extensions: 4447
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1343
Number of HSP's gapped (non-prelim): 2139
length of query: 514
length of database: 14,973,337
effective HSP length: 103
effective length of query: 411
effective length of database: 8,527,803
effective search space: 3504927033
effective search space used: 3504927033
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)