Query 010268
Match_columns 514
No_of_seqs 486 out of 1346
Neff 11.0
Searched_HMMs 46136
Date Thu Mar 28 22:32:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010268.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010268hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01299 synapt_SV2 synaptic 100.0 1.5E-45 3.3E-50 373.1 38.8 469 15-501 153-740 (742)
2 KOG0253 Synaptic vesicle trans 100.0 1.2E-43 2.5E-48 312.7 35.5 455 14-502 63-527 (528)
3 TIGR00887 2A0109 phosphate:H+ 100.0 1.9E-40 4.1E-45 332.4 40.2 430 18-506 5-500 (502)
4 COG2271 UhpC Sugar phosphate p 100.0 9.6E-42 2.1E-46 309.1 25.8 403 22-495 22-435 (448)
5 PRK11551 putative 3-hydroxyphe 100.0 3E-38 6.6E-43 309.4 38.6 381 24-491 10-393 (406)
6 PRK10642 proline/glycine betai 100.0 2.2E-37 4.8E-42 309.0 37.6 396 28-502 15-437 (490)
7 TIGR02332 HpaX 4-hydroxyphenyl 100.0 2.2E-37 4.8E-42 302.0 34.8 396 24-481 3-408 (412)
8 PRK10077 xylE D-xylose transpo 100.0 1.4E-37 3E-42 311.6 34.3 423 24-506 7-469 (479)
9 COG2814 AraJ Arabinose efflux 100.0 6.2E-37 1.3E-41 282.5 35.2 375 25-495 9-387 (394)
10 PRK12307 putative sialic acid 100.0 8.7E-37 1.9E-41 301.1 37.0 374 24-475 13-389 (426)
11 PRK11663 regulatory protein Uh 100.0 7.6E-37 1.6E-41 300.8 35.9 404 24-500 18-430 (434)
12 TIGR00879 SP MFS transporter, 100.0 2.1E-37 4.6E-42 311.0 32.4 421 33-502 32-478 (481)
13 PRK09556 uhpT sugar phosphate 100.0 7.1E-38 1.5E-42 311.1 28.5 414 9-493 9-448 (467)
14 TIGR00898 2A0119 cation transp 100.0 3.3E-37 7.3E-42 310.5 32.5 388 50-504 110-504 (505)
15 PRK03545 putative arabinose tr 100.0 2.3E-36 5.1E-41 293.9 36.6 372 27-494 7-380 (390)
16 TIGR00903 2A0129 major facilit 100.0 1.4E-36 3.1E-41 290.0 33.6 356 40-491 2-362 (368)
17 TIGR00891 2A0112 putative sial 100.0 3.2E-36 7E-41 295.5 35.8 384 23-472 6-393 (405)
18 KOG0569 Permease of the major 100.0 2E-36 4.3E-41 288.0 30.2 386 66-506 62-466 (485)
19 PRK10406 alpha-ketoglutarate t 100.0 4.4E-35 9.5E-40 288.3 38.1 376 25-492 18-422 (432)
20 TIGR00895 2A0115 benzoate tran 100.0 3E-35 6.6E-40 287.9 35.3 387 21-466 9-397 (398)
21 PRK09705 cynX putative cyanate 100.0 2.8E-35 6E-40 285.8 34.4 377 27-502 8-389 (393)
22 TIGR00890 2A0111 Oxalate/Forma 100.0 2E-35 4.4E-40 286.9 30.6 359 39-487 13-375 (377)
23 PRK03699 putative transporter; 100.0 9.9E-35 2.1E-39 282.6 34.1 374 26-493 4-379 (394)
24 PRK05122 major facilitator sup 100.0 1.6E-34 3.5E-39 282.2 35.6 363 30-493 16-388 (399)
25 PRK15075 citrate-proton sympor 100.0 2.5E-34 5.5E-39 283.1 36.9 358 27-473 13-398 (434)
26 PRK10213 nepI ribonucleoside t 100.0 6.1E-34 1.3E-38 276.1 38.6 367 26-489 17-386 (394)
27 PRK09952 shikimate transporter 100.0 3E-34 6.5E-39 282.3 36.3 381 26-492 19-431 (438)
28 PRK10489 enterobactin exporter 100.0 7.9E-35 1.7E-39 285.8 31.0 383 38-509 26-414 (417)
29 PRK03893 putative sialic acid 100.0 4.7E-34 1E-38 287.3 37.3 410 24-484 15-443 (496)
30 PRK11273 glpT sn-glycerol-3-ph 100.0 2E-34 4.3E-39 285.2 33.8 398 24-494 24-435 (452)
31 TIGR00893 2A0114 d-galactonate 100.0 1.2E-34 2.6E-39 283.6 31.1 383 38-491 3-396 (399)
32 PLN00028 nitrate transmembrane 100.0 5.2E-34 1.1E-38 283.0 34.1 391 19-493 26-432 (476)
33 PRK12382 putative transporter; 100.0 1.1E-33 2.3E-38 275.7 34.0 362 31-493 17-388 (392)
34 PRK15034 nitrate/nitrite trans 100.0 6.7E-33 1.5E-37 265.7 36.6 376 22-494 27-454 (462)
35 TIGR00894 2A0114euk Na(+)-depe 100.0 1.6E-33 3.5E-38 280.5 33.4 395 23-492 13-448 (465)
36 COG2223 NarK Nitrate/nitrite t 100.0 3.1E-33 6.7E-38 254.6 30.7 382 22-496 7-403 (417)
37 PRK14995 methyl viologen resis 100.0 4.3E-33 9.4E-38 278.3 34.4 398 27-469 4-413 (495)
38 PRK15402 multidrug efflux syst 100.0 1.1E-32 2.3E-37 269.9 36.4 376 24-489 8-390 (406)
39 TIGR00892 2A0113 monocarboxyla 100.0 1.3E-33 2.8E-38 278.8 28.7 397 22-488 12-415 (455)
40 TIGR00900 2A0121 H+ Antiporter 100.0 4.3E-33 9.4E-38 269.3 31.7 353 35-471 5-365 (365)
41 PRK09874 drug efflux system pr 100.0 2.7E-32 5.9E-37 267.7 34.8 372 33-494 18-398 (408)
42 PRK10091 MFS transport protein 100.0 1.7E-32 3.7E-37 265.8 32.4 366 32-494 6-376 (382)
43 PRK03633 putative MFS family t 100.0 4.1E-32 8.9E-37 263.1 35.1 360 31-490 8-368 (381)
44 TIGR00712 glpT glycerol-3-phos 100.0 5.9E-33 1.3E-37 273.8 28.0 403 25-499 23-438 (438)
45 cd06174 MFS The Major Facilita 100.0 8.2E-32 1.8E-36 258.9 33.9 345 34-492 4-350 (352)
46 PRK10504 putative transporter; 100.0 3.6E-31 7.9E-36 264.3 38.6 397 30-472 11-418 (471)
47 TIGR00897 2A0118 polyol permea 100.0 1.9E-31 4.1E-36 260.2 35.7 355 49-493 33-400 (402)
48 KOG0254 Predicted transporter 100.0 2.1E-32 4.6E-37 274.1 29.7 422 32-506 48-495 (513)
49 KOG0252 Inorganic phosphate tr 100.0 7.8E-33 1.7E-37 252.3 23.3 433 24-508 36-511 (538)
50 PRK10133 L-fucose transporter; 100.0 2.8E-31 6E-36 260.2 35.1 371 24-486 21-425 (438)
51 TIGR00899 2A0120 sugar efflux 100.0 1.5E-31 3.3E-36 259.4 32.5 363 36-492 4-372 (375)
52 TIGR00710 efflux_Bcr_CflA drug 100.0 3E-31 6.5E-36 258.4 34.6 341 37-468 13-360 (385)
53 TIGR00881 2A0104 phosphoglycer 100.0 1.4E-32 3E-37 267.2 25.0 368 36-474 2-377 (379)
54 TIGR00711 efflux_EmrB drug res 100.0 9.4E-32 2E-36 270.1 30.7 395 30-470 3-411 (485)
55 PRK11043 putative transporter; 100.0 9.5E-31 2.1E-35 255.8 36.3 341 38-473 15-361 (401)
56 PRK11195 lysophospholipid tran 100.0 9.8E-31 2.1E-35 253.7 34.4 369 35-494 9-380 (393)
57 PF07690 MFS_1: Major Facilita 100.0 4.6E-32 9.9E-37 260.8 23.9 343 35-460 2-352 (352)
58 PRK11646 multidrug resistance 100.0 1.1E-30 2.3E-35 254.0 32.9 356 39-489 20-383 (400)
59 PF00083 Sugar_tr: Sugar (and 100.0 6.2E-38 1.3E-42 311.5 -18.5 413 36-507 7-449 (451)
60 PRK10473 multidrug efflux syst 100.0 2.9E-30 6.2E-35 251.6 35.2 350 35-481 9-361 (392)
61 PRK15403 multidrug efflux syst 100.0 2.8E-30 6E-35 252.0 34.9 362 34-486 21-389 (413)
62 PRK10054 putative transporter; 100.0 6.5E-31 1.4E-35 255.0 30.0 364 36-491 14-381 (395)
63 TIGR00902 2A0127 phenyl propri 100.0 1.8E-30 4E-35 251.4 32.6 362 34-489 9-374 (382)
64 TIGR00885 fucP L-fucose:H+ sym 100.0 3.8E-30 8.2E-35 250.0 34.3 346 31-470 5-382 (410)
65 PRK11010 ampG muropeptide tran 100.0 5.1E-30 1.1E-34 254.8 35.8 370 33-493 16-402 (491)
66 KOG2532 Permease of the major 100.0 4.4E-30 9.6E-35 248.2 31.7 363 57-494 66-447 (466)
67 TIGR00883 2A0106 metabolite-pr 100.0 3.6E-30 7.7E-35 251.6 30.2 352 39-477 3-384 (394)
68 PRK15011 sugar efflux transpor 100.0 1.3E-29 2.8E-34 246.5 33.9 360 38-493 24-390 (393)
69 KOG0255 Synaptic vesicle trans 100.0 6.7E-30 1.5E-34 257.8 31.7 394 56-510 110-508 (521)
70 PRK11652 emrD multidrug resist 100.0 7E-29 1.5E-33 242.0 35.6 350 27-469 6-360 (394)
71 PRK11102 bicyclomycin/multidru 100.0 2.9E-29 6.3E-34 243.5 32.5 332 44-464 6-344 (377)
72 KOG1330 Sugar transporter/spin 100.0 2.5E-31 5.3E-36 243.9 16.7 368 24-470 28-413 (493)
73 PRK11128 putative 3-phenylprop 100.0 3.4E-29 7.3E-34 242.7 31.7 354 38-487 13-372 (382)
74 PRK09528 lacY galactoside perm 100.0 1.6E-29 3.5E-34 248.4 29.2 379 36-497 17-406 (420)
75 PRK11902 ampG muropeptide tran 100.0 2E-28 4.3E-33 239.0 36.4 365 35-493 5-389 (402)
76 TIGR00889 2A0110 nucleoside tr 100.0 5.7E-29 1.2E-33 242.8 31.8 379 36-501 9-409 (418)
77 KOG2504 Monocarboxylate transp 100.0 2.2E-30 4.7E-35 253.5 21.7 429 22-493 39-475 (509)
78 PF05977 MFS_3: Transmembrane 100.0 2.8E-28 6.2E-33 239.9 34.0 374 32-492 13-392 (524)
79 TIGR00896 CynX cyanate transpo 100.0 2.2E-29 4.7E-34 242.0 25.4 331 46-473 17-352 (355)
80 TIGR00886 2A0108 nitrite extru 100.0 6.4E-29 1.4E-33 240.2 26.6 343 33-455 5-365 (366)
81 KOG2533 Permease of the major 100.0 3.9E-28 8.4E-33 235.0 27.3 379 28-476 44-438 (495)
82 TIGR00882 2A0105 oligosacchari 100.0 2.2E-27 4.7E-32 231.5 31.6 375 34-492 7-393 (396)
83 COG0738 FucP Fucose permease [ 100.0 1.4E-27 3.1E-32 216.0 27.1 367 27-487 11-402 (422)
84 PRK06814 acylglycerophosphoeth 100.0 1E-27 2.2E-32 264.1 31.2 367 31-482 17-410 (1140)
85 TIGR00901 2A0125 AmpG-related 100.0 1.3E-27 2.8E-32 229.8 27.3 320 46-453 5-355 (356)
86 TIGR00924 yjdL_sub1_fam amino 100.0 2.1E-26 4.7E-31 227.7 33.4 429 32-495 13-469 (475)
87 PRK08633 2-acyl-glycerophospho 100.0 6.7E-27 1.5E-31 258.8 32.1 343 43-468 24-383 (1146)
88 KOG2615 Permease of the major 100.0 2.9E-27 6.3E-32 211.0 22.6 340 58-470 62-415 (451)
89 TIGR00792 gph sugar (Glycoside 100.0 8.5E-27 1.8E-31 230.9 25.8 335 49-472 20-383 (437)
90 COG2807 CynX Cyanate permease 100.0 7.8E-26 1.7E-30 201.6 28.8 367 28-491 11-382 (395)
91 TIGR02718 sider_RhtX_FptX side 100.0 2.1E-25 4.7E-30 217.0 34.1 367 31-489 3-386 (390)
92 PRK10207 dipeptide/tripeptide 100.0 1.6E-25 3.4E-30 221.5 32.7 417 31-495 16-477 (489)
93 PTZ00207 hypothetical protein; 100.0 6.2E-25 1.3E-29 216.7 35.9 448 25-493 24-551 (591)
94 TIGR00806 rfc RFC reduced fola 99.9 1.2E-25 2.5E-30 211.1 27.1 364 42-462 39-408 (511)
95 KOG3764 Vesicular amine transp 99.9 1E-26 2.2E-31 208.8 17.2 344 57-493 99-453 (464)
96 TIGR00805 oat sodium-independe 99.9 1.6E-25 3.5E-30 227.4 25.0 374 30-469 34-581 (633)
97 PRK09584 tppB putative tripept 99.9 3.3E-24 7.2E-29 213.4 31.8 414 36-494 28-479 (500)
98 PF03825 Nuc_H_symport: Nucleo 99.9 1.3E-23 2.9E-28 201.1 32.5 371 37-497 10-398 (400)
99 PF01306 LacY_symp: LacY proto 99.9 1.8E-23 4E-28 195.8 28.6 380 34-501 12-407 (412)
100 TIGR01301 GPH_sucrose GPH fami 99.9 4.1E-23 9E-28 199.8 30.7 395 37-499 12-476 (477)
101 PF06609 TRI12: Fungal trichot 99.9 5.2E-22 1.1E-26 194.6 33.3 404 34-468 49-466 (599)
102 TIGR00788 fbt folate/biopterin 99.9 4.3E-23 9.2E-28 203.7 26.0 370 27-471 24-415 (468)
103 PRK09669 putative symporter Ya 99.9 6.9E-22 1.5E-26 195.4 27.8 333 48-472 29-391 (444)
104 PF11700 ATG22: Vacuole efflux 99.9 1.8E-20 3.8E-25 183.0 35.4 347 65-493 71-467 (477)
105 PRK15462 dipeptide/tripeptide 99.9 6E-20 1.3E-24 178.7 36.0 166 34-199 14-185 (493)
106 PRK10429 melibiose:sodium symp 99.9 2.2E-21 4.8E-26 192.9 25.1 349 37-472 14-396 (473)
107 KOG4686 Predicted sugar transp 99.9 6.2E-23 1.3E-27 175.6 10.9 362 26-473 41-418 (459)
108 PF13347 MFS_2: MFS/sugar tran 99.9 5.7E-21 1.2E-25 188.0 26.0 333 49-472 22-387 (428)
109 KOG2563 Permease of the major 99.9 3.1E-20 6.8E-25 170.7 25.1 395 22-503 38-459 (480)
110 PRK11462 putative transporter; 99.9 2.4E-19 5.2E-24 177.0 29.7 331 49-472 30-390 (460)
111 PRK09848 glucuronide transport 99.9 1.2E-19 2.6E-24 179.8 27.5 344 37-472 16-391 (448)
112 TIGR01272 gluP glucose/galacto 99.9 9.8E-20 2.1E-24 169.8 24.6 277 113-480 6-301 (310)
113 COG2270 Permeases of the major 99.9 5.3E-19 1.1E-23 161.9 26.2 350 64-497 58-431 (438)
114 COG2211 MelB Na+/melibiose sym 99.8 3.5E-18 7.7E-23 161.9 27.4 337 49-472 33-399 (467)
115 COG3104 PTR2 Dipeptide/tripept 99.8 1.1E-17 2.3E-22 157.0 23.0 415 33-497 25-490 (498)
116 KOG2325 Predicted transporter/ 99.8 6.3E-18 1.4E-22 160.4 17.0 387 22-491 27-472 (488)
117 PRK10642 proline/glycine betai 99.7 8.3E-16 1.8E-20 153.9 22.4 184 43-226 264-458 (490)
118 PF03209 PUCC: PUCC protein; 99.7 1.6E-14 3.5E-19 133.3 28.6 329 54-469 5-363 (403)
119 KOG2816 Predicted transporter 99.7 2.3E-15 4.9E-20 145.4 20.8 361 28-469 21-392 (463)
120 PF03137 OATP: Organic Anion T 99.7 8.7E-18 1.9E-22 166.5 -0.3 378 33-470 7-515 (539)
121 KOG3626 Organic anion transpor 99.6 4.8E-14 1E-18 139.7 22.2 374 30-469 98-649 (735)
122 TIGR00889 2A0110 nucleoside tr 99.6 1.8E-14 3.8E-19 141.0 18.8 157 49-205 228-405 (418)
123 PF03092 BT1: BT1 family; Int 99.6 1.3E-13 2.8E-18 134.5 23.5 351 47-471 8-382 (433)
124 TIGR00880 2_A_01_02 Multidrug 99.6 6.9E-15 1.5E-19 120.8 11.7 132 70-201 4-136 (141)
125 TIGR01299 synapt_SV2 synaptic 99.6 7.8E-14 1.7E-18 142.8 21.1 139 67-206 598-737 (742)
126 PRK15011 sugar efflux transpor 99.6 1.1E-13 2.4E-18 134.8 20.6 156 48-204 235-392 (393)
127 PRK09528 lacY galactoside perm 99.6 4.9E-14 1.1E-18 138.6 18.3 150 56-205 254-406 (420)
128 PF05631 DUF791: Protein of un 99.6 6E-13 1.3E-17 121.0 22.8 178 23-205 32-219 (354)
129 PF01770 Folate_carrier: Reduc 99.6 7.7E-13 1.7E-17 123.8 23.9 359 49-455 24-388 (412)
130 TIGR00890 2A0111 Oxalate/Forma 99.6 6.5E-14 1.4E-18 135.9 16.7 148 49-196 225-375 (377)
131 PRK11551 putative 3-hydroxyphe 99.6 2.5E-13 5.4E-18 133.2 20.4 159 46-204 237-397 (406)
132 cd06174 MFS The Major Facilita 99.6 3.1E-13 6.7E-18 129.7 19.7 163 39-201 185-350 (352)
133 TIGR00902 2A0127 phenyl propri 99.5 3.9E-13 8.5E-18 130.4 19.6 154 45-200 221-376 (382)
134 PRK05122 major facilitator sup 99.5 6.1E-13 1.3E-17 130.1 20.9 156 48-205 235-391 (399)
135 TIGR00899 2A0120 sugar efflux 99.5 1.2E-12 2.6E-17 126.9 21.4 149 54-203 225-374 (375)
136 PRK11663 regulatory protein Uh 99.5 1.9E-13 4.2E-18 134.8 15.2 173 314-496 28-200 (434)
137 COG2814 AraJ Arabinose efflux 99.5 1.1E-13 2.5E-18 128.7 12.6 180 306-495 10-189 (394)
138 PRK09874 drug efflux system pr 99.5 8E-13 1.7E-17 129.8 19.4 155 47-201 237-396 (408)
139 PRK03545 putative arabinose tr 99.5 2E-12 4.4E-17 125.9 21.9 151 49-201 226-378 (390)
140 PRK10213 nepI ribonucleoside t 99.5 1.9E-13 4.1E-18 132.9 14.3 180 308-497 19-198 (394)
141 PRK10489 enterobactin exporter 99.5 1.5E-12 3.3E-17 128.0 20.2 159 48-206 242-403 (417)
142 TIGR02332 HpaX 4-hydroxyphenyl 99.5 2.8E-13 6E-18 132.6 14.7 180 309-498 8-193 (412)
143 KOG3762 Predicted transporter 99.5 1.2E-12 2.5E-17 123.5 17.8 143 351-493 403-546 (618)
144 PF07690 MFS_1: Major Facilita 99.5 2.5E-13 5.4E-18 130.5 14.0 170 319-498 6-176 (352)
145 TIGR00897 2A0118 polyol permea 99.5 3.1E-12 6.7E-17 125.0 21.4 164 38-202 231-400 (402)
146 PRK12382 putative transporter; 99.5 2.3E-12 4.9E-17 125.7 20.1 152 47-200 234-386 (392)
147 TIGR00710 efflux_Bcr_CflA drug 99.5 2.5E-13 5.5E-18 132.2 12.5 149 351-499 37-185 (385)
148 TIGR00892 2A0113 monocarboxyla 99.5 1E-12 2.2E-17 130.3 16.3 158 41-198 253-416 (455)
149 PRK03633 putative MFS family t 99.5 3.6E-12 7.8E-17 123.7 19.8 151 49-202 220-371 (381)
150 PRK10504 putative transporter; 99.5 7.4E-13 1.6E-17 132.5 15.1 178 309-496 10-187 (471)
151 PRK03893 putative sialic acid 99.5 3.8E-12 8.2E-17 128.3 20.3 147 49-195 295-445 (496)
152 TIGR00895 2A0115 benzoate tran 99.5 3.3E-13 7.3E-18 132.0 12.2 179 309-497 17-195 (398)
153 PRK14995 methyl viologen resis 99.5 1E-12 2.2E-17 131.8 15.7 179 310-498 7-186 (495)
154 PRK09556 uhpT sugar phosphate 99.5 4E-12 8.6E-17 126.8 19.9 170 33-202 262-448 (467)
155 TIGR00711 efflux_EmrB drug res 99.5 5.8E-13 1.3E-17 133.9 13.6 175 314-498 7-181 (485)
156 TIGR00924 yjdL_sub1_fam amino 99.5 1.2E-12 2.6E-17 130.0 15.2 175 309-490 10-188 (475)
157 PRK10054 putative transporter; 99.5 4.3E-13 9.4E-18 130.4 11.8 176 311-496 9-184 (395)
158 PRK03699 putative transporter; 99.5 4.4E-12 9.5E-17 123.7 18.7 167 37-204 213-381 (394)
159 PLN00028 nitrate transmembrane 99.4 1.2E-12 2.6E-17 130.5 14.4 178 306-494 33-219 (476)
160 COG2271 UhpC Sugar phosphate p 99.4 2E-13 4.3E-18 125.5 8.0 180 308-497 28-209 (448)
161 TIGR00891 2A0112 putative sial 99.4 1.5E-12 3.2E-17 127.7 14.4 181 306-497 9-191 (405)
162 TIGR00893 2A0114 d-galactonate 99.4 3.8E-13 8.2E-18 131.4 10.0 148 351-498 26-173 (399)
163 TIGR00900 2A0121 H+ Antiporter 99.4 1E-12 2.2E-17 126.9 11.8 143 351-493 31-178 (365)
164 PRK10091 MFS transport protein 99.4 1.4E-12 3E-17 126.6 12.7 178 311-498 5-182 (382)
165 PRK10473 multidrug efflux syst 99.4 1.7E-12 3.7E-17 126.6 13.4 170 320-499 14-183 (392)
166 PRK09705 cynX putative cyanate 99.4 1.6E-11 3.5E-16 119.5 19.9 163 42-206 218-385 (393)
167 TIGR00879 SP MFS transporter, 99.4 6.5E-12 1.4E-16 126.1 16.9 176 30-205 285-473 (481)
168 TIGR00883 2A0106 metabolite-pr 99.4 2.2E-12 4.8E-17 125.9 13.2 156 38-193 228-391 (394)
169 PRK15462 dipeptide/tripeptide 99.4 3.6E-12 7.8E-17 124.6 14.3 172 309-489 9-184 (493)
170 TIGR00881 2A0104 phosphoglycer 99.4 6.2E-13 1.3E-17 129.1 8.8 166 322-497 8-174 (379)
171 PRK12307 putative sialic acid 99.4 2E-12 4.3E-17 127.7 12.5 162 309-480 18-179 (426)
172 PRK15402 multidrug efflux syst 99.4 3.3E-12 7.1E-17 125.2 13.9 148 351-498 45-192 (406)
173 PRK11652 emrD multidrug resist 99.4 3E-12 6.4E-17 125.0 13.4 180 309-498 8-187 (394)
174 PRK09952 shikimate transporter 99.4 5.7E-11 1.2E-15 117.3 21.6 156 50-205 271-435 (438)
175 PRK11128 putative 3-phenylprop 99.4 4.4E-11 9.6E-16 116.1 20.2 147 50-198 226-374 (382)
176 PRK11010 ampG muropeptide tran 99.4 1.4E-10 3.1E-15 115.8 24.2 155 50-204 244-404 (491)
177 PF05977 MFS_3: Transmembrane 99.4 3.5E-11 7.7E-16 119.3 19.4 152 48-199 237-390 (524)
178 PRK11646 multidrug resistance 99.4 4.9E-12 1.1E-16 123.3 13.1 145 351-496 43-187 (400)
179 PRK10077 xylE D-xylose transpo 99.4 7.1E-11 1.5E-15 118.6 21.9 159 47-205 289-460 (479)
180 PRK11273 glpT sn-glycerol-3-ph 99.4 8.6E-12 1.9E-16 123.8 14.9 159 328-497 48-211 (452)
181 TIGR00712 glpT glycerol-3-phos 99.4 5.8E-12 1.3E-16 124.6 13.4 147 351-497 58-209 (438)
182 TIGR00880 2_A_01_02 Multidrug 99.4 3.4E-12 7.3E-17 104.7 9.7 137 360-496 4-140 (141)
183 TIGR00886 2A0108 nitrite extru 99.4 8.6E-12 1.9E-16 120.6 14.0 174 312-496 4-190 (366)
184 KOG1330 Sugar transporter/spin 99.4 2.8E-13 6E-18 125.8 3.3 185 310-504 34-219 (493)
185 PRK15403 multidrug efflux syst 99.4 8.2E-12 1.8E-16 122.2 13.7 149 351-499 48-196 (413)
186 TIGR00903 2A0129 major facilit 99.4 5.4E-12 1.2E-16 120.9 11.9 147 351-498 23-169 (368)
187 TIGR00882 2A0105 oligosacchari 99.4 7.1E-11 1.5E-15 115.3 19.9 139 60-198 250-390 (396)
188 PRK10207 dipeptide/tripeptide 99.3 1.4E-11 3.1E-16 122.3 14.8 167 309-484 14-184 (489)
189 PRK11102 bicyclomycin/multidru 99.3 4.4E-12 9.5E-17 123.1 10.9 148 351-498 23-170 (377)
190 TIGR02718 sider_RhtX_FptX side 99.3 1.4E-10 3.1E-15 112.9 21.4 148 51-198 230-386 (390)
191 PF11700 ATG22: Vacuole efflux 99.3 1.7E-10 3.7E-15 113.2 21.7 161 45-205 298-470 (477)
192 PRK15034 nitrate/nitrite trans 99.3 3.9E-11 8.5E-16 116.1 16.5 146 350-496 66-234 (462)
193 PRK11043 putative transporter; 99.3 1.8E-11 3.9E-16 119.8 14.1 144 351-494 38-181 (401)
194 PF06813 Nodulin-like: Nodulin 99.3 6.7E-11 1.4E-15 104.5 15.8 177 27-206 1-185 (250)
195 TIGR00887 2A0109 phosphate:H+ 99.3 6E-11 1.3E-15 119.4 17.8 170 37-206 296-492 (502)
196 PRK09584 tppB putative tripept 99.3 3.8E-11 8.2E-16 120.0 15.3 170 309-487 21-194 (500)
197 TIGR00894 2A0114euk Na(+)-depe 99.3 9.5E-12 2.1E-16 124.2 10.1 148 349-496 71-221 (465)
198 TIGR00792 gph sugar (Glycoside 99.3 1.5E-10 3.3E-15 114.7 18.2 134 48-181 241-383 (437)
199 PRK11195 lysophospholipid tran 99.3 2.6E-11 5.6E-16 117.9 11.8 142 351-497 35-176 (393)
200 PRK15075 citrate-proton sympor 99.3 3.8E-10 8.3E-15 111.5 20.2 143 40-182 249-398 (434)
201 KOG0569 Permease of the major 99.3 4.9E-10 1.1E-14 108.1 19.7 181 25-206 266-458 (485)
202 KOG3764 Vesicular amine transp 99.3 8.3E-12 1.8E-16 113.5 7.0 150 351-500 103-253 (464)
203 PF01306 LacY_symp: LacY proto 99.3 5.3E-10 1.2E-14 105.6 18.9 168 38-206 234-404 (412)
204 PRK11902 ampG muropeptide tran 99.3 6.4E-10 1.4E-14 108.8 20.3 148 52-203 233-390 (402)
205 TIGR00885 fucP L-fucose:H+ sym 99.2 1.1E-10 2.3E-15 114.0 14.0 170 311-490 5-203 (410)
206 TIGR01272 gluP glucose/galacto 99.2 7.3E-10 1.6E-14 103.6 18.9 155 33-190 144-302 (310)
207 PRK10406 alpha-ketoglutarate t 99.2 9.7E-10 2.1E-14 108.5 20.6 157 47-204 261-425 (432)
208 COG2223 NarK Nitrate/nitrite t 99.2 2.3E-10 4.9E-15 105.8 14.6 178 307-496 12-195 (417)
209 KOG2504 Monocarboxylate transp 99.2 1.6E-10 3.4E-15 114.1 14.0 174 30-203 299-476 (509)
210 COG2270 Permeases of the major 99.2 3.7E-10 7.9E-15 104.5 15.3 160 46-205 270-431 (438)
211 KOG0637 Sucrose transporter an 99.2 4.3E-11 9.3E-16 111.1 8.5 145 30-174 33-201 (498)
212 TIGR00898 2A0119 cation transp 99.2 4.3E-10 9.4E-15 113.7 16.5 149 53-206 347-498 (505)
213 PF06963 FPN1: Ferroportin1 (F 99.2 3.5E-08 7.6E-13 94.7 28.0 368 32-462 5-411 (432)
214 KOG3098 Uncharacterized conser 99.2 8.7E-09 1.9E-13 98.6 23.3 105 70-175 56-161 (461)
215 PF02487 CLN3: CLN3 protein; 99.2 4.8E-09 1E-13 98.6 21.1 327 66-466 61-394 (402)
216 PRK10133 L-fucose transporter; 99.2 7.2E-10 1.6E-14 109.2 15.5 151 307-467 24-177 (438)
217 KOG4332 Predicted sugar transp 99.2 1.6E-09 3.6E-14 93.1 15.1 315 46-453 54-390 (454)
218 TIGR00805 oat sodium-independe 99.2 5.2E-10 1.1E-14 114.5 14.6 143 351-493 65-280 (633)
219 PF03825 Nuc_H_symport: Nucleo 99.1 4.2E-09 9.1E-14 101.5 19.0 166 39-204 217-397 (400)
220 PRK08633 2-acyl-glycerophospho 99.1 2.8E-09 6.1E-14 118.9 20.3 142 53-194 257-401 (1146)
221 TIGR00896 CynX cyanate transpo 99.1 2.7E-09 5.9E-14 102.5 17.6 135 45-180 213-350 (355)
222 KOG4686 Predicted sugar transp 99.1 1.3E-09 2.8E-14 94.7 12.8 148 54-203 290-443 (459)
223 TIGR00806 rfc RFC reduced fola 99.1 1.3E-09 2.8E-14 103.8 13.9 124 350-475 57-181 (511)
224 KOG2615 Permease of the major 99.1 2.4E-10 5.2E-15 103.6 8.4 120 352-473 66-189 (451)
225 PRK09848 glucuronide transport 99.1 1.1E-08 2.4E-13 101.6 20.8 135 47-181 246-391 (448)
226 TIGR00926 2A1704 Peptide:H+ sy 99.1 1.7E-07 3.8E-12 95.4 29.3 153 49-201 8-180 (654)
227 TIGR00901 2A0125 AmpG-related 99.1 2.8E-09 6.1E-14 102.5 15.8 117 46-162 226-355 (356)
228 PRK06814 acylglycerophosphoeth 99.1 4.5E-09 9.8E-14 116.9 18.7 147 48-194 244-413 (1140)
229 PTZ00207 hypothetical protein; 99.1 1.6E-09 3.4E-14 108.1 13.3 161 322-495 40-206 (591)
230 PF06609 TRI12: Fungal trichot 99.1 2.2E-09 4.7E-14 106.4 13.8 138 354-492 78-215 (599)
231 KOG2532 Permease of the major 99.0 6.7E-10 1.4E-14 108.3 9.5 150 348-497 67-219 (466)
232 PRK10429 melibiose:sodium symp 99.0 2.6E-08 5.7E-13 99.5 19.8 139 43-181 245-396 (473)
233 TIGR01301 GPH_sucrose GPH fami 99.0 3.6E-09 7.8E-14 103.3 13.2 179 310-498 5-222 (477)
234 COG3104 PTR2 Dipeptide/tripept 99.0 2.3E-09 4.9E-14 101.6 11.0 185 309-498 21-210 (498)
235 PF13347 MFS_2: MFS/sugar tran 99.0 1.1E-08 2.3E-13 101.0 15.5 145 37-181 233-387 (428)
236 PRK09669 putative symporter Ya 99.0 6.9E-08 1.5E-12 95.8 21.3 131 51-181 251-391 (444)
237 TIGR00769 AAA ADP/ATP carrier 99.0 4.1E-06 9E-11 81.6 32.5 143 30-176 8-189 (472)
238 KOG3574 Acetyl-CoA transporter 98.9 1E-07 2.2E-12 86.6 18.2 143 29-174 31-191 (510)
239 COG0477 ProP Permeases of the 98.9 7.1E-08 1.5E-12 90.7 18.2 156 39-194 12-176 (338)
240 KOG0254 Predicted transporter 98.9 2E-08 4.3E-13 101.3 14.3 139 357-497 92-232 (513)
241 KOG0255 Synaptic vesicle trans 98.9 6.4E-09 1.4E-13 105.4 10.6 142 352-497 116-257 (521)
242 COG0738 FucP Fucose permease [ 98.9 3.1E-08 6.6E-13 91.3 13.7 172 310-491 14-207 (422)
243 KOG3762 Predicted transporter 98.9 3.1E-08 6.7E-13 94.2 12.2 164 39-202 381-546 (618)
244 KOG1237 H+/oligopeptide sympor 98.8 5.2E-06 1.1E-10 83.1 28.4 154 48-201 57-243 (571)
245 KOG0253 Synaptic vesicle trans 98.8 3.2E-08 6.9E-13 89.5 10.2 128 74-206 391-522 (528)
246 PF06779 DUF1228: Protein of u 98.8 3.9E-08 8.5E-13 69.9 8.6 81 41-121 4-84 (85)
247 TIGR00788 fbt folate/biopterin 98.8 4.4E-08 9.5E-13 97.3 11.2 148 57-204 281-447 (468)
248 COG2807 CynX Cyanate permease 98.8 1E-06 2.2E-11 80.3 18.4 160 40-200 219-382 (395)
249 COG2211 MelB Na+/melibiose sym 98.8 1E-06 2.2E-11 84.6 19.4 142 39-180 246-398 (467)
250 PRK11462 putative transporter; 98.7 5.7E-06 1.2E-10 82.2 23.6 120 62-181 261-390 (460)
251 KOG0252 Inorganic phosphate tr 98.7 5.5E-08 1.2E-12 90.8 8.4 116 351-466 81-203 (538)
252 KOG2533 Permease of the major 98.7 1.3E-07 2.8E-12 92.7 11.5 149 351-499 78-232 (495)
253 KOG3810 Micronutrient transpor 98.7 1.3E-07 2.8E-12 84.8 10.1 369 58-492 35-419 (433)
254 PF03209 PUCC: PUCC protein; 98.6 7.4E-06 1.6E-10 76.6 20.9 150 52-201 232-396 (403)
255 PF12832 MFS_1_like: MFS_1 lik 98.6 3.1E-07 6.7E-12 65.1 8.8 70 35-104 6-75 (77)
256 PF06813 Nodulin-like: Nodulin 98.6 2.2E-07 4.7E-12 82.3 9.4 138 320-469 13-157 (250)
257 PF00083 Sugar_tr: Sugar (and 98.5 2.8E-09 6E-14 106.2 -6.8 140 357-497 49-194 (451)
258 PF05978 UNC-93: Ion channel r 98.5 9.9E-06 2.1E-10 66.2 15.0 106 69-175 42-148 (156)
259 TIGR00939 2a57 Equilibrative N 98.5 8.7E-05 1.9E-09 72.4 23.7 105 357-462 310-427 (437)
260 PF03219 TLC: TLC ATP/ADP tran 98.4 0.00097 2.1E-08 65.7 30.4 154 23-177 18-205 (491)
261 COG3202 ATP/ADP translocase [E 98.4 0.00051 1.1E-08 65.7 27.2 151 23-177 21-209 (509)
262 PF13000 Acatn: Acetyl-coenzym 98.4 9.4E-06 2E-10 77.3 14.9 141 33-175 4-177 (544)
263 KOG2816 Predicted transporter 98.3 1.1E-05 2.4E-10 78.7 14.4 138 363-503 71-208 (463)
264 KOG2325 Predicted transporter/ 98.3 2.5E-06 5.4E-11 82.2 9.8 152 349-501 66-236 (488)
265 PF05631 DUF791: Protein of un 98.1 0.00012 2.6E-09 67.5 14.7 149 350-499 65-221 (354)
266 PF00854 PTR2: POT family; In 98.1 3.9E-05 8.5E-10 74.1 12.3 107 95-201 2-121 (372)
267 TIGR00926 2A1704 Peptide:H+ sy 98.1 5.2E-05 1.1E-09 77.6 13.6 142 351-492 20-180 (654)
268 KOG1479 Nucleoside transporter 97.9 0.002 4.4E-08 60.7 18.3 62 404-466 340-401 (406)
269 PF05978 UNC-93: Ion channel r 97.7 0.001 2.2E-08 54.5 12.8 111 356-467 39-149 (156)
270 KOG3880 Predicted small molecu 97.6 0.0013 2.8E-08 58.8 11.8 136 66-205 64-201 (409)
271 TIGR00769 AAA ADP/ATP carrier 97.6 0.0022 4.8E-08 62.8 14.5 152 308-468 6-190 (472)
272 PF07672 MFS_Mycoplasma: Mycop 97.4 0.0013 2.9E-08 57.6 9.9 55 148-202 2-61 (267)
273 KOG2563 Permease of the major 97.3 0.0012 2.5E-08 62.6 8.9 168 36-203 273-450 (480)
274 PRK03612 spermidine synthase; 97.2 0.048 1E-06 54.8 19.0 137 57-195 43-189 (521)
275 PF06963 FPN1: Ferroportin1 (F 97.1 0.022 4.8E-07 55.3 15.5 145 30-174 259-414 (432)
276 PF03092 BT1: BT1 family; Int 97.0 0.0037 8.1E-08 61.5 9.7 146 61-206 252-416 (433)
277 PF03137 OATP: Organic Anion T 97.0 0.00013 2.8E-09 73.3 -0.5 147 350-496 34-252 (539)
278 PF12832 MFS_1_like: MFS_1 lik 97.0 0.0024 5.3E-08 45.2 6.0 58 327-394 18-75 (77)
279 KOG3626 Organic anion transpor 96.9 0.011 2.5E-07 60.2 11.6 148 351-498 129-347 (735)
280 COG0477 ProP Permeases of the 96.8 0.013 2.8E-07 54.5 11.0 114 356-469 41-158 (338)
281 PF01770 Folate_carrier: Reduc 96.7 0.049 1.1E-06 52.1 13.9 103 366-469 53-155 (412)
282 PF02487 CLN3: CLN3 protein; 96.7 0.054 1.2E-06 51.8 14.2 109 63-175 280-394 (402)
283 PF00854 PTR2: POT family; In 96.5 0.012 2.6E-07 56.9 8.8 110 385-494 2-123 (372)
284 KOG3098 Uncharacterized conser 96.5 0.32 7E-06 47.5 17.9 133 38-171 249-407 (461)
285 PRK03612 spermidine synthase; 96.2 0.068 1.5E-06 53.8 12.5 136 352-488 48-191 (521)
286 PF01733 Nucleoside_tran: Nucl 96.1 0.0011 2.5E-08 61.9 -0.7 104 358-462 186-303 (309)
287 KOG2601 Iron transporter [Inor 95.9 0.091 2E-06 48.8 10.1 163 32-194 30-217 (503)
288 PF06779 DUF1228: Protein of u 95.8 0.023 5.1E-07 40.7 5.1 76 324-409 7-82 (85)
289 PF03219 TLC: TLC ATP/ADP tran 95.8 0.14 3.1E-06 50.7 12.1 153 305-468 20-205 (491)
290 KOG3097 Predicted membrane pro 95.3 2.4 5.2E-05 39.1 20.3 69 73-142 67-136 (390)
291 KOG1237 H+/oligopeptide sympor 94.4 0.76 1.6E-05 46.8 13.0 139 354-492 73-243 (571)
292 TIGR00939 2a57 Equilibrative N 94.4 0.48 1E-05 46.6 11.2 109 66-175 309-431 (437)
293 KOG0637 Sucrose transporter an 94.4 0.04 8.7E-07 52.6 3.5 145 310-464 33-200 (498)
294 COG3202 ATP/ADP translocase [E 94.1 1.7 3.7E-05 42.5 13.7 153 306-469 24-210 (509)
295 COG4262 Predicted spermidine s 90.5 15 0.00033 34.3 16.7 120 59-180 38-168 (508)
296 KOG4332 Predicted sugar transp 89.6 6.2 0.00013 35.4 10.8 129 66-198 284-426 (454)
297 KOG3574 Acetyl-CoA transporter 87.8 4.4 9.5E-05 38.4 9.1 78 309-401 31-116 (510)
298 KOG3097 Predicted membrane pro 86.7 19 0.00042 33.5 12.3 136 308-460 28-174 (390)
299 KOG1479 Nucleoside transporter 85.8 3.8 8.2E-05 39.3 7.8 110 63-174 281-401 (406)
300 KOG3810 Micronutrient transpor 80.6 10 0.00023 35.5 8.2 109 66-177 273-384 (433)
301 PF01733 Nucleoside_tran: Nucl 80.4 0.61 1.3E-05 43.6 0.4 107 68-174 186-306 (309)
302 KOG3880 Predicted small molecu 78.9 10 0.00022 34.9 7.3 133 358-495 66-200 (409)
303 COG4262 Predicted spermidine s 77.3 45 0.00097 31.4 11.0 80 406-487 104-184 (508)
304 PRK10263 DNA translocase FtsK; 76.1 43 0.00092 37.5 12.3 27 362-388 60-86 (1355)
305 KOG2765 Predicted membrane pro 76.1 26 0.00056 33.0 9.3 25 378-402 208-232 (416)
306 PF06912 DUF1275: Protein of u 75.2 55 0.0012 28.4 18.7 45 143-187 153-197 (209)
307 COG5336 Uncharacterized protei 74.9 17 0.00037 27.2 6.3 36 67-102 45-81 (116)
308 KOG2601 Iron transporter [Inor 73.5 35 0.00076 32.5 9.5 51 437-487 169-219 (503)
309 COG1288 Predicted membrane pro 72.9 80 0.0017 30.7 11.8 24 175-198 212-235 (481)
310 PF07672 MFS_Mycoplasma: Mycop 72.3 38 0.00082 30.5 9.2 65 67-131 144-218 (267)
311 COG5336 Uncharacterized protei 71.2 19 0.00041 26.9 5.8 52 438-489 37-90 (116)
312 KOG2881 Predicted membrane pro 69.7 83 0.0018 28.1 11.5 27 372-398 258-284 (294)
313 PRK10263 DNA translocase FtsK; 69.6 63 0.0014 36.3 11.8 29 163-191 142-170 (1355)
314 PF02694 UPF0060: Uncharacteri 66.6 14 0.0003 27.6 4.4 52 64-115 54-105 (107)
315 PF03547 Mem_trans: Membrane t 64.4 1.4E+02 0.0031 28.8 17.7 17 76-92 7-23 (385)
316 PRK02237 hypothetical protein; 63.0 23 0.0005 26.6 5.0 52 64-115 56-107 (109)
317 PF13000 Acatn: Acetyl-coenzym 61.1 48 0.001 33.0 8.2 60 124-183 412-472 (544)
318 KOG4830 Predicted sugar transp 52.8 27 0.00058 31.3 4.6 65 32-96 20-93 (412)
319 COG4769 Predicted membrane pro 51.6 24 0.00052 28.8 3.8 51 73-129 82-132 (181)
320 TIGR00844 c_cpa1 na(+)/h(+) an 50.3 3.5E+02 0.0077 29.1 28.9 34 159-192 108-141 (810)
321 PF11947 DUF3464: Protein of u 48.6 49 0.0011 26.9 5.2 50 116-167 96-145 (153)
322 PF02990 EMP70: Endomembrane p 48.1 1.9E+02 0.004 29.5 10.5 70 300-382 252-325 (521)
323 COG1268 BioY Uncharacterized c 46.4 85 0.0018 26.6 6.5 25 70-94 88-112 (184)
324 PF06912 DUF1275: Protein of u 43.0 2.2E+02 0.0048 24.6 10.5 20 453-472 172-191 (209)
325 PF11151 DUF2929: Protein of u 41.4 1E+02 0.0022 20.3 6.1 44 162-205 12-55 (57)
326 PHA03242 envelope glycoprotein 40.5 2.9E+02 0.0062 27.1 9.7 9 113-121 244-252 (428)
327 COG2962 RarD Predicted permeas 40.1 2.2E+02 0.0049 26.0 8.4 35 377-411 120-154 (293)
328 PRK10697 DNA-binding transcrip 38.3 82 0.0018 24.4 4.8 13 196-208 57-69 (118)
329 PF02632 BioY: BioY family; I 38.1 1.5E+02 0.0032 24.2 6.6 26 71-96 60-85 (148)
330 PF10785 NADH-u_ox-rdase: NADH 35.3 1.6E+02 0.0035 21.3 5.7 42 76-117 30-78 (86)
331 TIGR01666 YCCS hypothetical me 33.9 2.4E+02 0.0051 30.0 8.8 52 82-133 41-97 (704)
332 PF12805 FUSC-like: FUSC-like 32.9 2.3E+02 0.0049 26.1 7.9 35 99-133 4-39 (284)
333 PF09527 ATPase_gene1: Putativ 31.2 1.5E+02 0.0032 19.1 6.0 33 71-103 7-40 (55)
334 TIGR01667 YCCS_YHJK integral m 31.2 3.8E+02 0.0083 28.6 9.9 52 82-133 41-97 (701)
335 PF07760 DUF1616: Protein of u 31.1 4.2E+02 0.0091 24.4 9.2 56 120-175 22-77 (287)
336 PF06341 DUF1056: Protein of u 30.0 1.4E+02 0.003 20.0 4.1 36 116-151 27-62 (63)
337 PF11947 DUF3464: Protein of u 29.1 2.2E+02 0.0048 23.3 6.0 35 424-458 111-145 (153)
338 PF01914 MarC: MarC family int 28.9 3.7E+02 0.0081 23.3 8.0 60 429-489 25-85 (203)
339 COG2233 UraA Xanthine/uracil p 28.8 5.9E+02 0.013 25.3 20.2 121 30-153 17-142 (451)
340 TIGR02230 ATPase_gene1 F0F1-AT 26.3 2.8E+02 0.0061 20.8 6.1 25 78-102 56-81 (100)
341 PRK10599 calcium/sodium:proton 25.1 6.2E+02 0.013 24.4 9.2 29 43-71 236-264 (366)
342 COG1742 Uncharacterized conser 25.0 64 0.0014 24.1 2.1 52 62-113 53-104 (109)
343 PF04226 Transgly_assoc: Trans 24.7 1.9E+02 0.0041 18.2 4.5 12 454-465 6-17 (48)
344 PF11299 DUF3100: Protein of u 24.6 1.6E+02 0.0035 25.9 4.8 50 122-172 176-226 (241)
345 PF06123 CreD: Inner membrane 24.4 7E+02 0.015 24.7 12.3 72 82-156 309-385 (430)
346 PRK13743 conjugal transfer pro 22.9 3.8E+02 0.0081 21.0 6.4 63 26-88 40-102 (141)
347 PF13536 EmrE: Multidrug resis 22.9 2.7E+02 0.0059 21.1 5.6 22 379-400 84-105 (113)
348 PF04024 PspC: PspC domain; I 22.8 1.5E+02 0.0033 19.7 3.5 26 181-206 31-60 (61)
349 KOG0682 Ammonia permease [Inor 22.7 6.7E+02 0.015 25.1 9.0 83 82-169 272-359 (500)
350 PF04281 Tom22: Mitochondrial 22.5 2.3E+02 0.005 22.7 4.9 23 141-163 60-82 (137)
351 PF03547 Mem_trans: Membrane t 22.5 2.4E+02 0.0053 27.2 6.5 18 365-382 6-23 (385)
352 PF12805 FUSC-like: FUSC-like 22.1 3.5E+02 0.0075 24.9 7.0 13 405-417 21-33 (284)
353 PRK00293 dipZ thiol:disulfide 21.5 9.2E+02 0.02 25.0 14.7 24 357-380 328-351 (571)
354 PRK11588 hypothetical protein; 21.0 8.8E+02 0.019 24.6 21.9 48 85-132 137-186 (506)
355 KOG1278 Endosomal membrane pro 20.7 72 0.0016 31.9 2.2 31 351-381 356-386 (628)
356 TIGR00986 3a0801s05tom22 mitoc 20.6 2.4E+02 0.0052 22.7 4.6 23 140-162 57-79 (145)
357 PRK10692 hypothetical protein; 20.5 2E+02 0.0043 20.7 3.7 19 93-111 3-21 (92)
358 COG3619 Predicted membrane pro 20.3 6.1E+02 0.013 22.5 19.5 31 63-93 54-84 (226)
No 1
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1.5e-45 Score=373.13 Aligned_cols=469 Identities=24% Similarity=0.432 Sum_probs=354.3
Q ss_pred HHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCCh
Q 010268 15 DEAIVTMGFGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRR 94 (514)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r 94 (514)
++..++.+.++++|.++++++++.+..+++...++.++|.+.+++|++..+.+++.+++.++.+++++++|+++||+|||
T Consensus 153 d~~l~~~~~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR 232 (742)
T TIGR01299 153 ELIIQECGHGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRK 232 (742)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 34455667889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 010268 95 KGFLITAIVTSAAGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAW 173 (514)
Q Consensus 95 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~ 173 (514)
+++++++++.+++.++++++++++.++++|++.|++.|.. +...+++.|++|+++|++.++++.+++.+|.++++.++.
T Consensus 233 ~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~ 312 (742)
T TIGR01299 233 QCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAW 312 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999987 788899999999999999999999999999999998887
Q ss_pred HHhcc-------------cchHHHHHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCC
Q 010268 174 LVMPR-------------LGWRWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVS 240 (514)
Q Consensus 174 ~l~~~-------------~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
.+... .+||+.+++.++++++.++..+++||+|+|+..+++.+++.+.++++...+.......
T Consensus 313 ~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~---- 388 (742)
T TIGR01299 313 AIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHP---- 388 (742)
T ss_pred HHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCch----
Confidence 66543 3689999998888888888888999999999999999998888888765443211000
Q ss_pred chhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHH
Q 010268 241 DWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFG 320 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 320 (514)
......++... ...+++ .. +.+.+. ... .++.+..........+..++.++++++++..+.+++.+++
T Consensus 389 ~~~~~~~~~~~---~~~~~~-~~----~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~ 456 (742)
T TIGR01299 389 EKVFSVNHIKT---IHQEDE-LI----EIESDT---GTW-YQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFT 456 (742)
T ss_pred hHHHHHHHHHH---hhhhhh-hh----cccccc---cch-hhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHH
Confidence 00000000000 000000 00 000000 000 0000000001111223457789999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCccc----------------------ccccc--------------------------------
Q 010268 321 NAFSYYGLVLLTTELNNGQNK----------------------CVSNE-------------------------------- 346 (514)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~-------------------------------- 346 (514)
..+.||++..|.|.+.+.... ...+.
T Consensus 457 ~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (742)
T TIGR01299 457 LSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTF 536 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccce
Confidence 999999999999977433100 00000
Q ss_pred --c-----------------------c-----------------CCCcc---------cCcccchhhhhhchhhHHHHHH
Q 010268 347 --L-----------------------Q-----------------SGKSR---------DINYGDVFITSFAEFPGLLLAA 375 (514)
Q Consensus 347 --~-----------------------~-----------------~~~~~---------~~~~~~~~~~~~~~~~g~~~~g 375 (514)
. + .+... ........+..++.++|.++.|
T Consensus 537 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g 616 (742)
T TIGR01299 537 DDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSA 616 (742)
T ss_pred eeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 00000 0012335566788999999999
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHh
Q 010268 376 AMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIG 455 (514)
Q Consensus 376 ~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g 455 (514)
+++||+|||+++.++.++.+++.+++.+..+....+++.++.+++.++.++...++++|++|++.|++++|+.+..+.+|
T Consensus 617 ~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlG 696 (742)
T TIGR01299 617 LLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAA 696 (742)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998888877776665555555666777777788889999999999999999999999999999
Q ss_pred HhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcccccccCcC
Q 010268 456 GMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFPFETTGRG 501 (514)
Q Consensus 456 ~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (514)
.+++|+++|.+.+. +...++++.+++.++++++.++ .||++++.
T Consensus 697 aiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~-LPET~~~~ 740 (742)
T TIGR01299 697 AVLGILIFGSFVGI-TKAAPILFASAALACGGLLALK-LPDTRGQV 740 (742)
T ss_pred HHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHh-CCCCcccc
Confidence 99999999988875 3556777777777666666554 48888764
No 2
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.2e-43 Score=312.67 Aligned_cols=455 Identities=44% Similarity=0.740 Sum_probs=389.7
Q ss_pred HHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCC
Q 010268 14 VDEAIVTMGFGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGR 93 (514)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~ 93 (514)
.+++.+..+.++++|........++....+.....+.+.|.+.+..|.+..+..++......+..+++..+|.++|++||
T Consensus 63 v~ea~~aigfgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~gr 142 (528)
T KOG0253|consen 63 VDEAMNAIGFGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGR 142 (528)
T ss_pred ehhhhhhcCcccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhc
Confidence 45677788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 010268 94 RKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCLVGLGLGGGPVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAW 173 (514)
Q Consensus 94 r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~ 173 (514)
|+.+.+..+...+...+.+.++|+..++++|.+.|+|.|..|...++-.|..|..+|...+-.. ..+.+|.++...++.
T Consensus 143 r~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law 221 (528)
T KOG0253|consen 143 RKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGGLPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAW 221 (528)
T ss_pred chhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCCccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999888888889999999999888777 999999999999999
Q ss_pred HHhcccchHHHHHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhccc
Q 010268 174 LVMPRLGWRWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLS 253 (514)
Q Consensus 174 ~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (514)
....++|||+.....+.+..+.++..+++||+|++...+++++++.+.++++.+.|+.+.|...+....+.+.+++.
T Consensus 222 ~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~--- 298 (528)
T KOG0253|consen 222 GVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEE--- 298 (528)
T ss_pred HHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhh---
Confidence 99999999999999999999999999999999999999999999999999999999888776654332222211110
Q ss_pred CCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010268 254 SSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTT 333 (514)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (514)
.+.+....+..++ ......++++++.++..+..+..++...+.||+......
T Consensus 299 ---------------~~~~~~~~~a~ke-------------~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLltt 350 (528)
T KOG0253|consen 299 ---------------SDLDDSKSSAAKE-------------VRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTT 350 (528)
T ss_pred ---------------hchhhhhhccccc-------------cccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 0000001111111 112778899999999999999999999999999998888
Q ss_pred HhhcCccc------cccccccC----CCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhc
Q 010268 334 ELNNGQNK------CVSNELQS----GKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLF 403 (514)
Q Consensus 334 ~~~~~~~~------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 403 (514)
.+.+.... +.+.+.+. ..+.........+..+...+|.++.++++||+|||+.+..++++++++.+++..
T Consensus 351 elfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~ 430 (528)
T KOG0253|consen 351 ELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTT 430 (528)
T ss_pred HHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHH
Confidence 87765432 23333322 344444566677888999999999999999999999999999999999988888
Q ss_pred ccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHH
Q 010268 404 QQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVI 483 (514)
Q Consensus 404 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~ 483 (514)
........++.+..-++.++.+.+.+.+..|++|+..|+++.|.++.+..+|+++.|++. +......+.+..++++++
T Consensus 431 c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ 508 (528)
T KOG0253|consen 431 CKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALF 508 (528)
T ss_pred hcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHH
Confidence 777777788888888999999999999999999999999999999999999999999998 455556778899999999
Q ss_pred HHHHHHhhcccccccCcCC
Q 010268 484 LLSGISVLLFPFETTGRGL 502 (514)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~ 502 (514)
+++++...++..|+|+|++
T Consensus 509 ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 509 ILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred HHHHHHheeeeeccCCCCC
Confidence 9999999999999999864
No 3
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.9e-40 Score=332.37 Aligned_cols=430 Identities=22% Similarity=0.333 Sum_probs=310.2
Q ss_pred HHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-----CCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhC
Q 010268 18 IVTMGFGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLW-----HLSPNQESLITSVVFAGMLVGAYSWGIVSDNFG 92 (514)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G 92 (514)
.++.+.+++++..+.++.++.+.++++....+.+.|.+.+++ +.+..+.+++.+...++..++++++|+++||+|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~G 84 (502)
T TIGR00887 5 ADTAPFGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLG 84 (502)
T ss_pred hhccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 455678889999999999999999999999999999887642 355667899999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHhhhhh------HHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHH
Q 010268 93 RRKGFLITAIVTSAAGLLSAFAPN------YYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGT 165 (514)
Q Consensus 93 ~r~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~ 165 (514)
||+++.++.++..++.++++++++ ++.++++|++.|++.|.. +....++.|++|+++|++++++.+....+|.
T Consensus 85 rr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~ 164 (502)
T TIGR00887 85 RKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGI 164 (502)
T ss_pred cHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHH
Confidence 999999999999999998888765 788999999999999998 7788999999999999999999999999999
Q ss_pred HHHHHHHHHHhc-----------------------ccchHHHHHHhHHHHHHHHHHHHHccCChhhhhccCCch-HHHHH
Q 010268 166 ILEAGIAWLVMP-----------------------RLGWRWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTA-EARHV 221 (514)
Q Consensus 166 ~~~~~i~~~l~~-----------------------~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 221 (514)
++++.++..+.. .++||..|.+.++++++..+..+++||+|+|+..+++.+ ++.+.
T Consensus 165 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~ 244 (502)
T TIGR00887 165 LAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASD 244 (502)
T ss_pred HHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHH
Confidence 999988776532 247999999988888888888889999999987776653 34443
Q ss_pred HHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHH
Q 010268 222 LEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLI 301 (514)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (514)
+.+....+..+ + .++.+ +. ++++++ ...++++
T Consensus 245 ~~~~~~~~~~~-------------------------~----~~~~~----~~---~~~~~~------------~~~~~~~ 276 (502)
T TIGR00887 245 MSAVLQVKIEA-------------------------E----PDEVE----KA---STAVEV------------PKASWSD 276 (502)
T ss_pred HHHHhcccccc-------------------------C----ccccc----ch---hccccc------------hhhhHHH
Confidence 33332110000 0 00000 00 000000 0013444
Q ss_pred hhC----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcc------------cchhhhhh
Q 010268 302 LLS----PELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINY------------GDVFITSF 365 (514)
Q Consensus 302 l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~ 365 (514)
+++ ++.++..+.....+++..+.+|+...|.|.+.++.+ .+...+. ....+..+
T Consensus 277 l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (502)
T TIGR00887 277 FFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIG----------YSPPAATNNAYEELYKTAVGNLIIALA 346 (502)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHc----------CCCCccchhHHHHHHHHHHHHHHHHHH
Confidence 443 233344444445555666777787778887775444 3322111 12334445
Q ss_pred chhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhccc---CcchhHHHH-HHHHhhhcccccceeeccccccCcchh
Q 010268 366 AEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQ---PKGLTTGLL-FGARICITVTFTVVYVYAPEIYPTSVR 441 (514)
Q Consensus 366 ~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~p~~~~ 441 (514)
+.+++.++.++++||+|||+.++.+..+.+++++.+.... +........ +...++..+..+..+.+..|.+|++.|
T Consensus 347 ~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R 426 (502)
T TIGR00887 347 GTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYR 426 (502)
T ss_pred HHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHH
Confidence 6677889999999999999998887777666554444221 111111112 222222334556778888999999999
Q ss_pred hHHHHHHHHHHHHhHhHHHHHHHHHHhhc----------CchhHHHHHHHHHHHHHHHhhcccccccCcCCCCCC
Q 010268 442 TTGVGVASSIGRIGGMVCPLVAVALVHGC----------HQTAALILFELVILLSGISVLLFPFETTGRGLSDSL 506 (514)
Q Consensus 442 ~~~~g~~~~~~~~g~~~~p~i~g~l~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (514)
+++.|+.+.++.++++++|.+.|.+.+.. +....+++++++.+++.++. ++.||+|+++++|.+
T Consensus 427 ~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt~~~~leei~ 500 (502)
T TIGR00887 427 STAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT-LLIPETKGKSLEELS 500 (502)
T ss_pred HHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHh-eEeccCCCCCHHhhh
Confidence 99999999999999999999999998843 33456777777777666554 566899998876643
No 4
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.6e-42 Score=309.06 Aligned_cols=403 Identities=20% Similarity=0.212 Sum_probs=327.6
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHH
Q 010268 22 GFGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITA 101 (514)
Q Consensus 22 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~ 101 (514)
.++++|+.+++.+++++...++.+..++...|.+.++.++|.+|+|++.+.+.+.+.++..+.|.++||.+.|+.+.+++
T Consensus 22 ~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gL 101 (448)
T COG2271 22 TYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGL 101 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHH--HHHhcc
Q 010268 102 IVTSAAGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIA--WLVMPR 178 (514)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~--~~l~~~ 178 (514)
+++++..++++++++.+.+.++.++.|..+|.. |++...++.|+++++||+..++.+++.++|..+.|++. +++..+
T Consensus 102 ilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~ 181 (448)
T COG2271 102 ILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFH 181 (448)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhc
Confidence 999999999999999999999999999999998 89999999999999999999999999999999999998 888888
Q ss_pred cchHHHHHHhHHHHHHHHH-HHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCC
Q 010268 179 LGWRWLLGLSAFPSSLLLL-LYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSN 257 (514)
Q Consensus 179 ~gw~~~f~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
.+||..|++.++++++..+ .++.++|+|+...-.. .++
T Consensus 182 ~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~-ie~---------------------------------------- 220 (448)
T COG2271 182 GGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPP-IEE---------------------------------------- 220 (448)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCC-HHH----------------------------------------
Confidence 8999999999999887754 4666788775211100 000
Q ss_pred CCCCCccccccCCCchhHhhhhccCCccccccccccchh-hHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010268 258 EDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGI-TALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELN 336 (514)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (514)
..+++.+.. +++++.+ ..+.+ .-++.++++ +.+|.+++......+.=+++..|.|.|.
T Consensus 221 --------~~~d~~e~~-~~~~~~~---------~ls~~~i~~~YVL~N---k~iW~la~a~vfvYivR~gi~dW~p~YL 279 (448)
T COG2271 221 --------YRGDPLEIY-EEEKENE---------GLTAWQIFVKYVLKN---KLIWLLALANVFVYVVRYGINDWGPLYL 279 (448)
T ss_pred --------hhcCchhhh-hhhccCC---------CccHHHHHHHHHHcC---hHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 000000000 0000000 00011 133445555 5677777888888888899999999998
Q ss_pred cCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHH--hhHHHHH-HHHHHHHHHhhhhhcccCc--chhH
Q 010268 337 NGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRL--GRKLSMS-SMFFCCCIFLVPLLFQQPK--GLTT 411 (514)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~--g~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~ 411 (514)
.+.. +++...+....+++-.++++|.++.|+++||+ |||.... ++.+...++++.+...++. +...
T Consensus 280 ~e~k---------~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~ 350 (448)
T COG2271 280 SEVK---------GFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDA 350 (448)
T ss_pred HHhc---------CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHH
Confidence 7653 48888899999999999999999999999997 5665544 4444445555555555444 6667
Q ss_pred HHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHH-hHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHh
Q 010268 412 GLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRI-GGMVCPLVAVALVHGCHQTAALILFELVILLSGISV 490 (514)
Q Consensus 412 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 490 (514)
+++++.|+...+..-..-....|..|++..|++.|+...++++ |...+....|++.|.+||...|.++.+.++++.++.
T Consensus 351 ~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll 430 (448)
T COG2271 351 ILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLL 430 (448)
T ss_pred HHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHH
Confidence 7788888888777767777889999999999999999999998 999999999999999999999988888877777666
Q ss_pred hcccc
Q 010268 491 LLFPF 495 (514)
Q Consensus 491 ~~~~~ 495 (514)
+...+
T Consensus 431 ~~~~~ 435 (448)
T COG2271 431 LPVWN 435 (448)
T ss_pred HHHHh
Confidence 65543
No 5
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=3e-38 Score=309.42 Aligned_cols=381 Identities=25% Similarity=0.304 Sum_probs=297.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHH
Q 010268 24 GKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIV 103 (514)
Q Consensus 24 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~ 103 (514)
.+++|.++..+++..+.++++....++..|.+.+++|.|+.+.|++.+.+.++..+++++.|+++||+|||+++..+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 89 (406)
T PRK11551 10 SSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVAL 89 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 45788888888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 010268 104 TSAAGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWR 182 (514)
Q Consensus 104 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~ 182 (514)
..++.+++.++++++.+++.|++.|++.+.. +...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+||
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 169 (406)
T PRK11551 90 FGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWR 169 (406)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHH
Confidence 9999999999999999999999999998887 777789999999999999999999999999999999998888889999
Q ss_pred HHHHHhHHHHHHHHH-HHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCC
Q 010268 183 WLLGLSAFPSSLLLL-LYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDT 261 (514)
Q Consensus 183 ~~f~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (514)
..|++.++..++..+ ..+++||+|++...+.+.++.++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----------------------------------------- 208 (406)
T PRK11551 170 HIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRAP----------------------------------------- 208 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhhh-----------------------------------------
Confidence 999988776655544 35567887643211110000000
Q ss_pred CccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Q 010268 262 TPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNK 341 (514)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (514)
..+.+++++..+..+..+...+.....++....|.|.+..+.+
T Consensus 209 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g- 251 (406)
T PRK11551 209 ------------------------------------VLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVGQG- 251 (406)
T ss_pred ------------------------------------hHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-
Confidence 0011111111122223333334444455566677787775544
Q ss_pred cccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhh
Q 010268 342 CVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICI 421 (514)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 421 (514)
.+....+.......++.++++++.|++.||+++|+.+..+.+..+++++.+...++.+...+..++.+++.
T Consensus 252 ---------~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 322 (406)
T PRK11551 252 ---------LSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFV 322 (406)
T ss_pred ---------CChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 77777788888889999999999999999999999888777766666665555555555556666777777
Q ss_pred cccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHH-HHHHHHHHhh
Q 010268 422 TVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFEL-VILLSGISVL 491 (514)
Q Consensus 422 ~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~-~~~~~~~~~~ 491 (514)
++..+..+++..|.+|++.|+++.|+.+....+|..++|.+.|.+.++.+.+...+...+ ..+++.++.+
T Consensus 323 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 323 VGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred HhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 777788889999999999999999999999999999999999999998665544443333 3333333333
No 6
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=2.2e-37 Score=309.04 Aligned_cols=396 Identities=18% Similarity=0.227 Sum_probs=278.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcch-hHH-----HHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHH
Q 010268 28 LCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQ-ESL-----ITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITA 101 (514)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~g~-----i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~ 101 (514)
+..+....+++++++++...++...|.+.++++.+..+ .++ +.++..+++.+++++.|+++||+|||+++.++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 44666778899999999999999999999998654432 222 257788999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHH--------HHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 010268 102 IVTSAAGLLSAFAPNYYL--------LLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIA 172 (514)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~ 172 (514)
++++++.++++++++++. ++++|+++|++.|.. +...+++.|++|+++||++.++...+..+|.++++.+.
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999864 889999999999998 77779999999999999999999999888988888766
Q ss_pred HHHh--------cccchHHHHHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhh
Q 010268 173 WLVM--------PRLGWRWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEH 244 (514)
Q Consensus 173 ~~l~--------~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (514)
..+. ..+|||+.|++.+++.++..++...+||+|++...+++.++. ..+
T Consensus 175 ~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~----------~~~------------- 231 (490)
T PRK10642 175 VLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQG----------DRE------------- 231 (490)
T ss_pred HHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhh----------ccc-------------
Confidence 5443 257999999998776666666666789988653211100000 000
Q ss_pred hhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHH
Q 010268 245 ELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFS 324 (514)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 324 (514)
+. .+ ++ ..++++++++ .++.+.......++....
T Consensus 232 ---------------------------~~----~~-~~-------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 265 (490)
T PRK10642 232 ---------------------------GL----QD-GP-------------KVSFKEIATK-HWRSLLTCIGLVIATNVT 265 (490)
T ss_pred ---------------------------cc----cc-cc-------------cCCHHHHHHH-hHHHHHHHHHHHHHHHHH
Confidence 00 00 00 0033444433 223333333444455667
Q ss_pred HHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHh-hhhh-
Q 010268 325 YYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFL-VPLL- 402 (514)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~-~~~~- 402 (514)
+|....|.|.+.++. .+.+............++.+++.++.|+++||+|||+.+..+.++..+.. ..+.
T Consensus 266 ~~~~~~~~p~~l~~~---------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~ 336 (490)
T PRK10642 266 YYMLLTYMPSYLSHN---------LHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFIL 336 (490)
T ss_pred HHHHHHHHHHHHHHh---------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 778888888877432 12555445556666778888999999999999999998877765433222 2121
Q ss_pred -cccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcC-chhHHHHHH
Q 010268 403 -FQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCH-QTAALILFE 480 (514)
Q Consensus 403 -~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g-~~~~~~~~~ 480 (514)
...+........++.+++.+...+....+..|.+|++.|+++.|+.+.+..+++.++|.+.|++.+..+ ++.++++..
T Consensus 337 ~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~ 416 (490)
T PRK10642 337 INSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLM 416 (490)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHH
Confidence 222233333444555555555556667778899999999999998777778888999999999988655 454555555
Q ss_pred HHHHHHHHHhhcccccccCcCC
Q 010268 481 LVILLSGISVLLFPFETTGRGL 502 (514)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~ 502 (514)
+..+++.+..+ +.||++++..
T Consensus 417 ~~~~i~~~~~~-~~pes~~~~~ 437 (490)
T PRK10642 417 VVAVIGLITGV-TMKETANRPL 437 (490)
T ss_pred HHHHHHHHHHH-HhccccCCCC
Confidence 55555544444 4477766544
No 7
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=2.2e-37 Score=302.03 Aligned_cols=396 Identities=17% Similarity=0.208 Sum_probs=283.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHH
Q 010268 24 GKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIV 103 (514)
Q Consensus 24 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~ 103 (514)
+|.+|..+.++++.++++++++...++..|.+.+++|+|..+.|++.+++.+++.+++++.|++.||+|||+++..+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~ 82 (412)
T TIGR02332 3 KKLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVL 82 (412)
T ss_pred eeehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHH
Confidence 35678888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc-----
Q 010268 104 TSAAGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMP----- 177 (514)
Q Consensus 104 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~----- 177 (514)
.+++.++.++++|++.+++.|++.|++.+.. +....++.|++|+++|++++++++.+.++|.++++++++++.+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 162 (412)
T TIGR02332 83 WGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM 162 (412)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999999999988 7777889999999999999999999999999999999988763
Q ss_pred -ccchHHHHHHhHHHHHHHH-HHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCC
Q 010268 178 -RLGWRWLLGLSAFPSSLLL-LLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSS 255 (514)
Q Consensus 178 -~~gw~~~f~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (514)
..|||+.|++.+++.++.. +.++++||+|+.. +.-.++.++..++..+.+..
T Consensus 163 ~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~--~~l~~~~~~~~~~~~~~~~~------------------------ 216 (412)
T TIGR02332 163 ALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKA--KWLDEEDKKALKEMIDNDQL------------------------ 216 (412)
T ss_pred CccchhHHHHHHHHHHHHHHHHHhhccCCCcccC--CCCCHHHHHHHHHHHHhccc------------------------
Confidence 4699999999888877654 4466778887421 00011111111110000000
Q ss_pred CCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010268 256 SNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTEL 335 (514)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (514)
+.++ +++ +.++ ........++.++++ .++.....+++....++.+..|.|.+
T Consensus 217 -~~~~--~~~--~~~~-------------------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~ 268 (412)
T TIGR02332 217 -TLEQ--PEG--AFAH-------------------AAMPQRSMLREIFTP----AIMLYTLAYFCLTNTLSAINIWTPQI 268 (412)
T ss_pred -cccc--ccc--cccc-------------------ccccHHHHHHHhcCh----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 000 0000 000001134444443 24455555666667777888899988
Q ss_pred hcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHH-HHHHHHHHHHHhhhhhcccCcchhHHHH
Q 010268 336 NNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLS-MSSMFFCCCIFLVPLLFQQPKGLTTGLL 414 (514)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (514)
.++.+ .+.+...++.......++.++|+++.|+++||+++|+. ........++.++......+........
T Consensus 269 l~~~~--------~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (412)
T TIGR02332 269 LQSFN--------QGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGI 340 (412)
T ss_pred HHhcC--------CCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 86531 12555666777888899999999999999999987664 3333333333332222222222222222
Q ss_pred HHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcC-chhHHHHHHH
Q 010268 415 FGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCH-QTAALILFEL 481 (514)
Q Consensus 415 ~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g-~~~~~~~~~~ 481 (514)
.+.+++.....+..+....|.+|++.|++++|+.+...++|++++|.+.|.+.|..| +...+.+.++
T Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~ 408 (412)
T TIGR02332 341 IMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAA 408 (412)
T ss_pred HHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHH
Confidence 222223222334445566778999999999999999999999999999999999886 5555554444
No 8
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=1.4e-37 Score=311.57 Aligned_cols=423 Identities=19% Similarity=0.248 Sum_probs=298.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--------CCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChH
Q 010268 24 GKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLW--------HLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRK 95 (514)
Q Consensus 24 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~ 95 (514)
.++.++..+.+.++.+..+++...+++..|.+.+++ +.+..+.+++.+++.++..++++++|+++||+|||+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~ 86 (479)
T PRK10077 7 SSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRD 86 (479)
T ss_pred chHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 455666777777888999999999999999888877 889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhh------------hhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHH
Q 010268 96 GFLITAIVTSAAGLLSAFA------------PNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWT 162 (514)
Q Consensus 96 ~l~~~~~~~~~~~~~~~~~------------~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 162 (514)
+++++.++..++.++.+++ +.++.++++|+++|++.|.. +...+++.|++|+++|++++++.+.+..
T Consensus 87 ~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~ 166 (479)
T PRK10077 87 SLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAII 166 (479)
T ss_pred HHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHH
Confidence 9999999998888877753 23567889999999999998 7778999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh--------cccchHHHHHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCC
Q 010268 163 VGTILEAGIAWLVM--------PRLGWRWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLP 234 (514)
Q Consensus 163 ~G~~~~~~i~~~l~--------~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (514)
+|.++++.+++.+. +.+|||+.|++.+++.++..+..+++||+|++...+++.++.++..++.....
T Consensus 167 ~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~----- 241 (479)
T PRK10077 167 FGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNT----- 241 (479)
T ss_pred HHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCCh-----
Confidence 99999988776553 35699999999888887777777889999987655555544443333221000
Q ss_pred CCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHH
Q 010268 235 SGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLL 314 (514)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 314 (514)
+.+...++. .+..+++.+ ..+..+...........
T Consensus 242 ------~~~~~~~~~-----------------------~~~~~~~~~----------------~~~~~~~~~~~~~~~~~ 276 (479)
T PRK10077 242 ------LATQALQEI-----------------------KHSLDHGRK----------------TGGKLLMFGVGVIVIGV 276 (479)
T ss_pred ------hHHHHHHHH-----------------------HHHHHHhhh----------------hhhhhcchhHHHHHHHH
Confidence 000000000 000000000 00001110000111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHH
Q 010268 315 WLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCC 394 (514)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~ 394 (514)
....+.....++...++.|.+..+.+ .+...........++..+++.++.+++.||+|||+.+..+.++.
T Consensus 277 ~~~~~~~~~~~~~~~~~~p~i~~~~g----------~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~ 346 (479)
T PRK10077 277 MLSVFQQFVGINVVLYYAPEIFKTLG----------ASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGM 346 (479)
T ss_pred HHHHHHHHhChhHHHHHHHHHHHHcC----------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHH
Confidence 11122222333445566676654333 55555556666778888999999999999999999999888888
Q ss_pred HHHhhhhhcc--cC-cc-hhHHHHHHHHhhhcc-cccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHH--
Q 010268 395 CIFLVPLLFQ--QP-KG-LTTGLLFGARICITV-TFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALV-- 467 (514)
Q Consensus 395 ~~~~~~~~~~--~~-~~-~~~~~~~~~g~~~~~-~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~-- 467 (514)
+++.+.+... .+ .. ......++.+.+.+. ..+..+.+++|.+|++.|+++.|+.+.+++++.++++.+.+.+.
T Consensus 347 ~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~ 426 (479)
T PRK10077 347 AIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKN 426 (479)
T ss_pred HHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc
Confidence 7776655422 12 11 222233333333333 34677899999999999999999999999999999987776554
Q ss_pred ----hhcCchhHHHHHHHHHHHHHHHhhcccccccCcCCCCCC
Q 010268 468 ----HGCHQTAALILFELVILLSGISVLLFPFETTGRGLSDSL 506 (514)
Q Consensus 468 ----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (514)
+..++...++++++++++++++.+++.||+|+++.+|.+
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 469 (479)
T PRK10077 427 SWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEME 469 (479)
T ss_pred cchhhhccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHH
Confidence 566777788888888788877777778888887766543
No 9
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.2e-37 Score=282.55 Aligned_cols=375 Identities=19% Similarity=0.188 Sum_probs=296.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHH
Q 010268 25 KFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVT 104 (514)
Q Consensus 25 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~ 104 (514)
+..+..+..+.++.|......+....++|.+.+|+|+|..+.|++.++|.+++.+++|+...+.||+.||++++..+.++
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lF 88 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALF 88 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH
Confidence 44566677777888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Q 010268 105 SAAGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRW 183 (514)
Q Consensus 105 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~ 183 (514)
.++.+++++++||+.++++|++.|+..|.+ +...++..+..|+++|++++++...+.+++.++|.+++.++.+.+|||.
T Consensus 89 i~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~ 168 (394)
T COG2814 89 IVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRA 168 (394)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHH
Confidence 999999999999999999999999999998 7777899999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCC
Q 010268 184 LLGLSAFPSSLLLLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTT 262 (514)
Q Consensus 184 ~f~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (514)
.|++.+.++++..+. +..+| |+... +....+.
T Consensus 169 ~F~~ia~l~ll~~~~~~~~lP--~~~~~-~~~~~~~-------------------------------------------- 201 (394)
T COG2814 169 TFLAIAVLALLALLLLWKLLP--PSEIS-GSLPGPL-------------------------------------------- 201 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCC--CccCC-CCCCcch--------------------------------------------
Confidence 999999998887555 66777 21000 0000000
Q ss_pred ccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhcCccc
Q 010268 263 PKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYY-GLVLLTTELNNGQNK 341 (514)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 341 (514)
.....+++++....... ..++.....| .+.|..|.+.+..+
T Consensus 202 ----------------------------------~~~~~~l~~p~v~~~l~---~t~l~~~g~F~~ftYi~P~L~~v~g- 243 (394)
T COG2814 202 ----------------------------------RTLLRLLRRPGVLLGLL---ATFLFMTGHFALYTYIRPFLESVAG- 243 (394)
T ss_pred ----------------------------------hHHHHHhcCchHHHHHH---HHHHHHcchhhhHHhHHHHHHHccC-
Confidence 01222333322222222 2222222222 33344555554433
Q ss_pred cccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcc-cCcchhHHHHHHHHhh
Q 010268 342 CVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQ-QPKGLTTGLLFGARIC 420 (514)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~ 420 (514)
++.....+....+++++++|..++|++.|| +.|+.+.....+.++.++.+.+. .+.+......++.++.
T Consensus 244 ---------~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a 313 (394)
T COG2814 244 ---------FSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFA 313 (394)
T ss_pred ---------CCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 788888999999999999999999999999 88888877777776666666544 4444555555666666
Q ss_pred hcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcccc
Q 010268 421 ITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFPF 495 (514)
Q Consensus 421 ~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 495 (514)
.............+.. ++.++.+.++.....++|..+|..++|.+.|+.|+....+..+++.+++.++.....+
T Consensus 314 ~~~~~~~~~~~~a~~~-p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 314 FSPALQGLQTRLARLA-PDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred hhhhhhHHHHHhcccC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6666556666666644 4789999999999999999999999999999999888888888888777777665543
No 10
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=8.7e-37 Score=301.08 Aligned_cols=374 Identities=18% Similarity=0.238 Sum_probs=275.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHH
Q 010268 24 GKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIV 103 (514)
Q Consensus 24 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~ 103 (514)
+++++..+..++++++.+.++.....+..|.+.+++|+|+.+.+++.+++.+++.++++++|+++||+|||+++.++.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~ 92 (426)
T PRK12307 13 TRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVA 92 (426)
T ss_pred CHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 35667777888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 010268 104 TSAAGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWR 182 (514)
Q Consensus 104 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~ 182 (514)
.+++.++.+++++++.++++|++.|++.+.. +....++.|++|+++|++++++...+..+|.++++.+.+.+.+.++||
T Consensus 93 ~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~ 172 (426)
T PRK12307 93 YSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWR 172 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHH
Confidence 9999999999999999999999999999887 777789999999999999999999999999999999999998889999
Q ss_pred HHHHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCC
Q 010268 183 WLLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTT 262 (514)
Q Consensus 183 ~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (514)
+.|++..+..++........||++++...+ ... .. +
T Consensus 173 ~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~------------~~~---~~-------------------------~---- 208 (426)
T PRK12307 173 AAFFVGLLPVLLVIYIRARAPESKEWEEAK------------LSG---KG-------------------------K---- 208 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCChHHHHhh------------hhc---cc-------------------------c----
Confidence 999885544333333222334433211000 000 00 0
Q ss_pred ccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccc
Q 010268 263 PKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKC 342 (514)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (514)
+.+... ......++.+++++..+.........+......+....+.|.+..+.+
T Consensus 209 -----~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-- 262 (426)
T PRK12307 209 -----HSQSAW-------------------SVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEG-- 262 (426)
T ss_pred -----ccccch-------------------hhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--
Confidence 000000 000013455555544443333333333333344445566776664433
Q ss_pred ccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHh--h
Q 010268 343 VSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARI--C 420 (514)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~ 420 (514)
.++...+.......++.++++++.+++.||++||+.+..+.++.++..+.+..............+.+. .
T Consensus 263 --------~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (426)
T PRK12307 263 --------FDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMAT 334 (426)
T ss_pred --------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHh
Confidence 666666777788889999999999999999999998888877766655444332222212222222222 2
Q ss_pred hcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhH
Q 010268 421 ITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAA 475 (514)
Q Consensus 421 ~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~ 475 (514)
..+..+..+.++.|.+|++.|++++|+.+.+..+++.++|.+.|.+.+..|....
T Consensus 335 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~ 389 (426)
T PRK12307 335 NVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAA 389 (426)
T ss_pred cccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHH
Confidence 2333455667788999999999999999999999999999999999999886543
No 11
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=7.6e-37 Score=300.81 Aligned_cols=404 Identities=16% Similarity=0.151 Sum_probs=285.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHH
Q 010268 24 GKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIV 103 (514)
Q Consensus 24 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~ 103 (514)
++.++..+...+++++..+++...+++..|.+.+++|+|..+.|++.+.+.+++.+++++.|+++||+|||+++.++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~ 97 (434)
T PRK11663 18 RYWRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIA 97 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHH
Confidence 34566677777788888888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 010268 104 TSAAGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWR 182 (514)
Q Consensus 104 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~ 182 (514)
.+++.++.+++++++.+++.|++.|++.|.. +...+++.+++++++|++++++.+.+.++|..++|.+.+.+.+.+|||
T Consensus 98 ~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~ 177 (434)
T PRK11663 98 TGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWR 177 (434)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHH
Confidence 9999999999999999999999999999887 777789999999999999999999999999999999999999989999
Q ss_pred HHHHHhHHHHHHHH-HHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCC
Q 010268 183 WLLGLSAFPSSLLL-LLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDT 261 (514)
Q Consensus 183 ~~f~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (514)
+.|++.+++.++.. +..++++|+|+....+...+..+
T Consensus 178 ~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~------------------------------------------ 215 (434)
T PRK11663 178 YGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRH------------------------------------------ 215 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccc------------------------------------------
Confidence 99999887766554 44556777664211000000000
Q ss_pred CccccccCCCchhHhhhhccCCccccccccccchhhHHH-HhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc
Q 010268 262 TPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALL-ILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQN 340 (514)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (514)
+.++..++.+.++ .+....++ ..+++ +.++......+.....++....|.|.+..+.
T Consensus 216 -------~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~- 273 (434)
T PRK11663 216 -------DALELAQQQEGAG-----------LSRKEILTKYVLLN---PYIWLLSFSYVLVYVVRAAINDWGNLYMSET- 273 (434)
T ss_pred -------cccccchhccccC-----------CChhhhHHHHHhcC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 0000000000000 00000111 12222 2333344444455555666677888777432
Q ss_pred ccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHH--hhH-HHHHH---HHHHHHHHhhhhhcccCcchhHHHH
Q 010268 341 KCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRL--GRK-LSMSS---MFFCCCIFLVPLLFQQPKGLTTGLL 414 (514)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~--g~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (514)
.+.+...++...+...+++.+++++.|++.||+ ++| ..... +.....+.+..+. ..+........
T Consensus 274 --------~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 344 (434)
T PRK11663 274 --------LGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMP-FASYVMQAACF 344 (434)
T ss_pred --------cCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcc-cccHHHHHHHH
Confidence 237777778888888999999999999999998 333 22222 1111111111111 12222222223
Q ss_pred HHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhccc
Q 010268 415 FGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFP 494 (514)
Q Consensus 415 ~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 494 (514)
+..|++.............|..|++.++++.|+.+.+.++|.+++|.+.|.+.|+.|+...+...+++.+++++..+...
T Consensus 345 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 424 (434)
T PRK11663 345 FTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFL 424 (434)
T ss_pred HHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333322222233456689999999999999999999999999999999999999988888888888877777666555
Q ss_pred ccccCc
Q 010268 495 FETTGR 500 (514)
Q Consensus 495 ~~~~~~ 500 (514)
++++++
T Consensus 425 ~~~~~~ 430 (434)
T PRK11663 425 NAQAPR 430 (434)
T ss_pred hhhchh
Confidence 444443
No 12
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=2.1e-37 Score=310.96 Aligned_cols=421 Identities=23% Similarity=0.297 Sum_probs=296.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCC--------cchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHH
Q 010268 33 YAGMGWISEAMEMMLLSFVGPAVQSLWHLS--------PNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVT 104 (514)
Q Consensus 33 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s--------~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~ 104 (514)
++.++.+...++...+.+..|.+..+++.+ ..+.|++.+++.++..++++++|+++||+|||++++++.++.
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~ 111 (481)
T TIGR00879 32 IAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLF 111 (481)
T ss_pred HHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHH
Confidence 344455666777788888889888888777 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh---hhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHH---HHHhc
Q 010268 105 SAAGLLSAFA---PNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIA---WLVMP 177 (514)
Q Consensus 105 ~~~~~~~~~~---~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~---~~l~~ 177 (514)
.++.++..+. .+++.+++.|++.|++.+.. +...+++.|++|+++|++++++.+.+..+|.++++.++ ..+.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 191 (481)
T TIGR00879 112 VIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNN 191 (481)
T ss_pred HHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9998888554 34568999999999999988 66778999999999999999999999999999999998 66667
Q ss_pred ccchHHHHHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCC
Q 010268 178 RLGWRWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSN 257 (514)
Q Consensus 178 ~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
..+||+.|++.++..++.++..+++||+|++...+++.++..+..++... .+.+. ....++.
T Consensus 192 ~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------~~~~~~~-------- 253 (481)
T TIGR00879 192 TLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRG---TSGED-------KELLDEL-------- 253 (481)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhC---CCCCc-------HHHHHHH--------
Confidence 78999999997777777777778889998765544444333322222110 00000 0000000
Q ss_pred CCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 010268 258 EDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNN 337 (514)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (514)
+........+.+ ..+..+..+...+++...+.++..++..+...........+.|.+..
T Consensus 254 --------------~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (481)
T TIGR00879 254 --------------ELIDIKRSIEKR-------SVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFE 312 (481)
T ss_pred --------------HHHHHHHHHHHh-------hccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHH
Confidence 000000000000 00001122222222222333444444444444444455566676664
Q ss_pred CccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhh---c--ccC-----c
Q 010268 338 GQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLL---F--QQP-----K 407 (514)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~---~--~~~-----~ 407 (514)
+.+ .+....+.......++.+++.++.+++.||++||+.+..+.++.+++.+.+. . ..+ .
T Consensus 313 ~~g----------~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (481)
T TIGR00879 313 NAG----------VSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSG 382 (481)
T ss_pred HcC----------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchh
Confidence 443 6666667778888899999999999999999999998888777766655544 1 111 2
Q ss_pred chhHHHHHHHHh-hhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHH
Q 010268 408 GLTTGLLFGARI-CITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLS 486 (514)
Q Consensus 408 ~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~ 486 (514)
+.......+.+. ...+..+....+..|.+|++.|+++.|+.+...++|++++|.+.|.+.++.++...+++.+++++++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 462 (481)
T TIGR00879 383 NVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLG 462 (481)
T ss_pred HHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHH
Confidence 222222222222 2333446677788999999999999999999999999999999999999989888888888888888
Q ss_pred HHHhhcccccccCcCC
Q 010268 487 GISVLLFPFETTGRGL 502 (514)
Q Consensus 487 ~~~~~~~~~~~~~~~~ 502 (514)
+++.+++.+|+|+++.
T Consensus 463 ~i~~~~~~~~~~~~~~ 478 (481)
T TIGR00879 463 LIFVYFFLPETKGRTL 478 (481)
T ss_pred HHHHheecccCCCCCh
Confidence 8887777777776554
No 13
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=7.1e-38 Score=311.10 Aligned_cols=414 Identities=13% Similarity=0.092 Sum_probs=292.2
Q ss_pred CCCCCHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhh
Q 010268 9 KQTYTVDEAIVTMGFGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVS 88 (514)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~ 88 (514)
+++.+-+++..+..+.+..+.++..++++++..+.++..+++..|.+.+++|+|..+.|++.+++.+++.+++++.|+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~ 88 (467)
T PRK09556 9 KPTLDLPLEVQRKMWFKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYA 88 (467)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHh
Confidence 33344444444445667788888899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCChHHHHHHHHHHHHHHHHHhh-----hhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHH
Q 010268 89 DNFGRRKGFLITAIVTSAAGLLSAF-----APNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWT 162 (514)
Q Consensus 89 Dr~G~r~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 162 (514)
||+|||+++.++.++++++.++.++ +++++.+++.|++.|++.+.. +...+++.+++|+++||+++|+...+.+
T Consensus 89 Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~ 168 (467)
T PRK09556 89 DGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHN 168 (467)
T ss_pred hccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccc
Confidence 9999999999888888777766554 589999999999999999887 7777899999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccc---chHHHHHHhHHHHHHHHHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCC
Q 010268 163 VGTILEAGIAWLVMPRL---GWRWLLGLSAFPSSLLLLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNL 238 (514)
Q Consensus 163 ~G~~~~~~i~~~l~~~~---gw~~~f~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (514)
+|.++++++..++.+.. +||..|.+.+++.++..++ +++.+++|+.. +..++ ++...
T Consensus 169 lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~---~~~~~-~~~~~--------------- 229 (467)
T PRK09556 169 LGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEEL---GWGKA-EEIFG--------------- 229 (467)
T ss_pred hhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhc---CCCCh-hhccc---------------
Confidence 99999999887766543 6999998888777766544 44456655321 00000 00000
Q ss_pred CCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHH-HHhhChhHHHHHHHHHHH
Q 010268 239 VSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITAL-LILLSPELIKSTLLLWLV 317 (514)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~ 317 (514)
+ . ..+++ ++++ ++ +......+ +..+++ +.++..++.
T Consensus 230 -------------------~--~-----~~~~~---~~~~--~~---------~~~~~~~~~~~~l~~---~~~~~~~~~ 266 (467)
T PRK09556 230 -------------------E--P-----ISEED---KETE--ST---------DMTKWQIFVEYVLKN---PVIWLLCFA 266 (467)
T ss_pred -------------------C--c-----cchhh---hccc--cc---------cCcHHHHHHHHHHcC---hHHHHHHHH
Confidence 0 0 00000 0000 00 00000011 113333 334455555
Q ss_pred HHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 010268 318 FFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIF 397 (514)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~ 397 (514)
.++....+++...|.|.|.++. .+.+..+++.......++.++++++.|+++||++||+.......+..+.
T Consensus 267 ~~~~~~~~~~~~~~~p~yl~~~---------~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~ 337 (467)
T PRK09556 267 NIFLYIVRIGIDNWSPVYAFQE---------LGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALII 337 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc---------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 5666666677788888776432 2367777777778888899999999999999999887765544333332
Q ss_pred hh--hhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHH-hHhHHHHHHHHHHh------
Q 010268 398 LV--PLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRI-GGMVCPLVAVALVH------ 468 (514)
Q Consensus 398 ~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~~~p~i~g~l~~------ 468 (514)
.. .+....+.+...+..++.|++..+..........|.+|++.+|++.|+.+.++++ |.+++|.+.|.+.|
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~ 417 (467)
T PRK09556 338 FTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGT 417 (467)
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccc
Confidence 22 2222233333434455555443333333335667999999999999999999996 77999999999999
Q ss_pred ------hcCchhHHHHHHHHHHHHHHHhhcc
Q 010268 469 ------GCHQTAALILFELVILLSGISVLLF 493 (514)
Q Consensus 469 ------~~g~~~~~~~~~~~~~~~~~~~~~~ 493 (514)
..+|...|.++.++.+++.+..++.
T Consensus 418 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 418 PIFGYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred ccccccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 5677777877777776665555443
No 14
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=3.3e-37 Score=310.54 Aligned_cols=388 Identities=37% Similarity=0.645 Sum_probs=298.5
Q ss_pred HHHHHhhhhcCCC---cchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 010268 50 FVGPAVQSLWHLS---PNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCL 126 (514)
Q Consensus 50 ~~~~~~~~~~~~s---~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 126 (514)
+..|.+.+|+|++ ..+.+++.+++.++..+++++.|+++||+|||++++++.++.+++.++.+++++++.++++|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 5678899999999 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHHHHccCC
Q 010268 127 VGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLLYSVTPES 205 (514)
Q Consensus 127 ~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~ 205 (514)
.|++.+.. +...+++.|++|+++|+++.++...+..+|.+++|.+++.+. +||+.|++.+++.++..+..+++||+
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~---~wr~~~~~~~i~~~~~~~~~~~~~es 266 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP---DWRWLQLAVSLPTFLFFLLSWFVPES 266 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999997 778899999999999999999999999999999999887764 49999999998888887777889999
Q ss_pred hhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCcc
Q 010268 206 PRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDST 285 (514)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (514)
|++...+++.+++.+.+++..+.++...+.+ ..+ .+ .+++.++++
T Consensus 267 p~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~---------~~~--------------------~~--~~~~~~~~~---- 311 (505)
T TIGR00898 267 PRWLISQGRIEEALKILQRIAKINGKKLPAE---------VLS--------------------LS--LEKDLSSSK---- 311 (505)
T ss_pred hHHHHHCCCHHHHHHHHHHHHHHcCCCCCHH---------HHh--------------------hh--hhhhhhhcc----
Confidence 9999888888887777776655443211000 000 00 000000000
Q ss_pred ccccccccchhhHHHHhhCh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhh
Q 010268 286 STLANSNMGGITALLILLSP-ELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITS 364 (514)
Q Consensus 286 ~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (514)
+...+++++++ +.++..+..+..++.....+++...+.+.+. .+ ......+.+
T Consensus 312 ---------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~---~~~~~~~~~ 365 (505)
T TIGR00898 312 ---------KQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLG--------------GN---IYLDLFISG 365 (505)
T ss_pred ---------CCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccC--------------CC---hHHHHHHHH
Confidence 01145556654 4444455555556666666666655554332 21 233445667
Q ss_pred hchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCc--chhHHHHHHHHhhhcccccceeeccccccCcchhh
Q 010268 365 FAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPK--GLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRT 442 (514)
Q Consensus 365 ~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~ 442 (514)
+..+++.++.+++.||+|||+.+..+.++.+++++.+.+..+. +......++.+++.+..++..+.+..|.+|++.|+
T Consensus 366 ~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 445 (505)
T TIGR00898 366 LVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRN 445 (505)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHh
Confidence 7888999999999999999999999888888877766654433 34444555666667777788889999999999999
Q ss_pred HHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcccccccCcCCCC
Q 010268 443 TGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFPFETTGRGLSD 504 (514)
Q Consensus 443 ~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (514)
+++|+.+.+..+|++++|.+.+ + +..+...++.+++++.++++++.+ +.||+++++++|
T Consensus 446 ~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~lpet~~~~l~~ 504 (505)
T TIGR00898 446 LGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTL-FLPETKGVPLPE 504 (505)
T ss_pred hhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHH-cCcCCCCCCCCC
Confidence 9999999999999999999999 4 444567778888877777766654 457888877654
No 15
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=2.3e-36 Score=293.91 Aligned_cols=372 Identities=15% Similarity=0.084 Sum_probs=276.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHH
Q 010268 27 QLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSA 106 (514)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~ 106 (514)
+|..++.+.++.+..........++.|.+.+++|.|+.+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.++
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 86 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIA 86 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 45444444444444444444556678999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHH
Q 010268 107 AGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLL 185 (514)
Q Consensus 107 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f 185 (514)
+.++++++++++.+++.|+++|++.+.. +...+++.|++|+++|++++|+...+.++|.+++|++++.+.+.+|||+.|
T Consensus 87 ~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f 166 (390)
T PRK03545 87 SHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTF 166 (390)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHH
Confidence 9999999999999999999999999877 677789999999999999999999999999999999999999989999999
Q ss_pred HHhHHHHHHHHHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCcc
Q 010268 186 GLSAFPSSLLLLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPK 264 (514)
Q Consensus 186 ~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (514)
++.++++++..+. ...+||.|+ +++++ .
T Consensus 167 ~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~-~--------------------------------------------- 195 (390)
T PRK03545 167 LAIGGGALITLLLLIKLLPLLPS-----EHSGS-L--------------------------------------------- 195 (390)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCC-----CCcch-H---------------------------------------------
Confidence 9988877766544 444555431 00000 0
Q ss_pred ccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccc
Q 010268 265 EMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVS 344 (514)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (514)
+..+++++++..+... ...++.....+....+.+.+..+.
T Consensus 196 --------------------------------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~----- 235 (390)
T PRK03545 196 --------------------------------KSLPLLFRRPALVSLY---LLTVVVVTAHFTAYSYIEPFVQQV----- 235 (390)
T ss_pred --------------------------------HHHHHHHhCcHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHh-----
Confidence 0122233332222211 222222222333333444443321
Q ss_pred ccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhccc
Q 010268 345 NELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVT 424 (514)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 424 (514)
.+.+....+.......++.++++++.+++.||+++|.......+............++.+...+..++.|++....
T Consensus 236 ----~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~ 311 (390)
T PRK03545 236 ----AGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCI 311 (390)
T ss_pred ----cCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcc
Confidence 2366777777888888999999999999999999886544433333332233334444555556667777777666
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhccc
Q 010268 425 FTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFP 494 (514)
Q Consensus 425 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 494 (514)
.+.......+..| +.+++++|+.+...++|..+||.+.|.+.|+.|+...+...+++.+++.++.+...
T Consensus 312 ~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 312 GLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred hHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 6666677777776 68899999999999999999999999999999999889888888888777766554
No 16
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=1.4e-36 Score=289.96 Aligned_cols=356 Identities=14% Similarity=0.072 Sum_probs=261.4
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHH
Q 010268 40 SEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYL 119 (514)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~ 119 (514)
.+...+..+++.+|.+.+|+|+|+.+.|++.+.+.+++.+++++.|+++||+|||++++.+......+.......++++.
T Consensus 2 ~~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (368)
T TIGR00903 2 ASQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEW 81 (368)
T ss_pred hhhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 34566788899999999999999999999999999999999999999999999998876655555444433333478999
Q ss_pred HHHHHHHHhhhccchhhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHH-HH
Q 010268 120 LLFFRCLVGLGLGGGPVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLL-LL 198 (514)
Q Consensus 120 l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~-~~ 198 (514)
+++.|++.|++.+........+.|++|+++|++++++.+.+..+|.+++++++..+.+.+|||..|++.+++.++.. +.
T Consensus 82 l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~ 161 (368)
T TIGR00903 82 LLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILV 161 (368)
T ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHH
Confidence 99999999999986665566679999999999999999999999999999999999999999999999888776654 44
Q ss_pred HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhh
Q 010268 199 YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKE 278 (514)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (514)
++++||+|++..+ +.+ .++
T Consensus 162 ~~~lp~~p~~~~~--~~~-~~~---------------------------------------------------------- 180 (368)
T TIGR00903 162 LAALPALPFQAAE--GFG-FKD---------------------------------------------------------- 180 (368)
T ss_pred HHHcCCCCCCCCC--Ccc-hHH----------------------------------------------------------
Confidence 6678887643100 000 000
Q ss_pred hccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCccc
Q 010268 279 MKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYG 358 (514)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (514)
..+.+++++++ +.++......++....++++..|.|.+.++.+ ++.. .+.
T Consensus 181 ----------------~~~~~~~ll~~---~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g----------~s~~-~~~ 230 (368)
T TIGR00903 181 ----------------AVKEFGALAGR---KDLWIIGAILGFGVALFDNLAIWLEAALRPAG----------LEDI-AGD 230 (368)
T ss_pred ----------------HHHHHHHHHcC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----------CChH-HHH
Confidence 00034455554 34566666777778888888999999986543 4433 333
Q ss_pred chhhhhhchhhHHHHHHHHHHHHhh---HHHHH-HHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeecccc
Q 010268 359 DVFITSFAEFPGLLLAAAMVDRLGR---KLSMS-SMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPE 434 (514)
Q Consensus 359 ~~~~~~~~~~~g~~~~g~l~dr~g~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 434 (514)
...+..+.+. +..+++.||..| |+... ....+.++.+..+....+......+..+.+++....++..+++.+|
T Consensus 231 ~~~l~~~~g~---~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 307 (368)
T TIGR00903 231 AVALAILAGL---IGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGK 307 (368)
T ss_pred HHHHHHHHHH---HHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 4444444444 445777777654 33322 2333334444343434444444445555666666677778889999
Q ss_pred ccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhh
Q 010268 435 IYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVL 491 (514)
Q Consensus 435 ~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 491 (514)
.+|++.|+++.|+.+..+++++..+|.+.+.+.. +....|.++++..+++++...
T Consensus 308 ~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 308 FCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred hcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998874 566677777777777766654
No 17
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=3.2e-36 Score=295.46 Aligned_cols=384 Identities=20% Similarity=0.322 Sum_probs=282.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHH
Q 010268 23 FGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAI 102 (514)
Q Consensus 23 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~ 102 (514)
.++++|+.+..++++++.++++....+++.|.+.+++|.|..+.|++.+++.++..+++++.|.++||+|||++++++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 45678888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccc-
Q 010268 103 VTSAAGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLG- 180 (514)
Q Consensus 103 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~g- 180 (514)
+.+++.++.+++++++.+++.|++.|++.+.. +...+++.|++|+++|++++++.+.+..+|.++++.+++.+.+..+
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~ 165 (405)
T TIGR00891 86 LFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGD 165 (405)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 99999999999999999999999999999887 7777899999999999999999999999999999999999887666
Q ss_pred -hHHHHHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCC
Q 010268 181 -WRWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNED 259 (514)
Q Consensus 181 -w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (514)
||+.|++.++..++..+....+||++++...+++.++..+..++.. +.
T Consensus 166 ~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---------------------------- 214 (405)
T TIGR00891 166 GWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILY---GG---------------------------- 214 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHh---cc----------------------------
Confidence 9999998777666666666677876543211111100000000000 00
Q ss_pred CCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 010268 260 DTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQ 339 (514)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (514)
++.... ..+ ......+... ++.++.+...................+.|.+..+.
T Consensus 215 ----------~~~~~~---~~~------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (405)
T TIGR00891 215 ----------EHRIAN---IVM------------TLAAAMVQSA-GKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKAD 268 (405)
T ss_pred ----------chhhhh---hhh------------hhhHHhhhhh-hhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Confidence 000000 000 0000011100 11112222222222233333334444555554321
Q ss_pred cccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh-hhhcccCcchhHHHHHHHH
Q 010268 340 NKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLV-PLLFQQPKGLTTGLLFGAR 418 (514)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g 418 (514)
.+.+..+.+.......++.++++++.+++.||++||+.+..+..+..+... .+....+.+...+..++.+
T Consensus 269 ---------~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (405)
T TIGR00891 269 ---------LGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQ 339 (405)
T ss_pred ---------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 236676777788888999999999999999999999988877766543332 2223333344444445566
Q ss_pred hhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCc
Q 010268 419 ICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQ 472 (514)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~ 472 (514)
++..+..+....++.|.+|++.|++++|+.+.+..+|..++|.+.|.+.|+.|.
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~ 393 (405)
T TIGR00891 340 MLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDE 393 (405)
T ss_pred HHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 666667777888899999999999999999999999999999999999999883
No 18
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-36 Score=287.96 Aligned_cols=386 Identities=23% Similarity=0.338 Sum_probs=296.4
Q ss_pred hHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHHhhhccch-hhHHHHH
Q 010268 66 ESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFA---PNYYLLLFFRCLVGLGLGGG-PVLASWF 141 (514)
Q Consensus 66 ~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~g~~-~~~~~~i 141 (514)
.+.+.+++.+|.++++++.|.++||+|||..+.++.++..++.+++.++ +++..++++|++.|+..|.. ....-++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 3678889999999999999999999999999999998888887776654 68899999999999999998 5556799
Q ss_pred HhhcCCCchhHHHHHHHHHHHHHHHHHHHHHH-H-HhcccchHHHHHHhHHHHHHHHHHHHHccCChhhhhc-cCCchHH
Q 010268 142 LEFIPAPNRGFWMVIFQTFWTVGTILEAGIAW-L-VMPRLGWRWLLGLSAFPSSLLLLLYSVTPESPRYLCL-KGRTAEA 218 (514)
Q Consensus 142 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~-~-l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~ 218 (514)
.|..|.+.||....+.+.+..+|.+++..++. . +.+.-.|++.+....+++++.++.+.++||+|+|+.. +++.+++
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A 221 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEA 221 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHH
Confidence 99999999999999999999999999977763 2 3345569999999999999999999999999999988 7888888
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhH
Q 010268 219 RHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITA 298 (514)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (514)
++.++..+...+++ .+.++. .++.++++.. +.+..+
T Consensus 222 ~~sl~~y~G~~~~~-----------~~~e~~-----------------------~~e~~~~~~~----------~~~~~s 257 (485)
T KOG0569|consen 222 RKALKFYRGKEDVE-----------AEIEEM-----------------------LREIEEEELE----------KKKQIS 257 (485)
T ss_pred HHHHHHHhCCCcch-----------hHHHHH-----------------------HHHHHHhccc----------cccCCc
Confidence 88888876432110 000000 0000000000 001126
Q ss_pred HHHhhChh-HHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHH
Q 010268 299 LLILLSPE-LIKSTLLLWLVFFGN-AFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAA 376 (514)
Q Consensus 299 ~~~l~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~ 376 (514)
++++++++ .++...+.+...+++ ....+...+|...++.+.+ ++.+.+.+.....++...+.++++.+
T Consensus 258 l~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG----------~~~~~a~~an~~~g~v~~~~t~~~~~ 327 (485)
T KOG0569|consen 258 LRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAG----------FTPEEAQYANLGIGIVNLLSTLVSPF 327 (485)
T ss_pred HHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcC----------CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66766654 444444444444443 3344555566666665444 88888888899999999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHHHhhhhhcc----cC--cchh---HHHHHHHHhh-hcccccceeeccccccCcchhhHHHH
Q 010268 377 MVDRLGRKLSMSSMFFCCCIFLVPLLFQ----QP--KGLT---TGLLFGARIC-ITVTFTVVYVYAPEIYPTSVRTTGVG 446 (514)
Q Consensus 377 l~dr~g~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~---~~~~~~~g~~-~~~~~~~~~~~~~~~~p~~~~~~~~g 446 (514)
+.||+|||+.++.+..++.+..+.+... .. .|.. +.+.++..+. ..+..|+.+-+.+|++|++.|+.+++
T Consensus 328 lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s 407 (485)
T KOG0569|consen 328 LIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQS 407 (485)
T ss_pred HHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHH
Confidence 9999999999999998888776665421 11 2222 2233333333 33456889999999999999999999
Q ss_pred HHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcccccccCcCCCCCC
Q 010268 447 VASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFPFETTGRGLSDSL 506 (514)
Q Consensus 447 ~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (514)
+...+.++..++-...+..+.+..|. ..|+++.+.+++..+..++..||||+|+..|..
T Consensus 408 ~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~ 466 (485)
T KOG0569|consen 408 VATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEII 466 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHH
Confidence 99999999999999999999999988 588889999999999999999999999876543
No 19
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=4.4e-35 Score=288.34 Aligned_cols=376 Identities=20% Similarity=0.309 Sum_probs=257.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC---CCcchhHH---HHHHHHHHHHHhhhhHHhhhhhhCChHHHH
Q 010268 25 KFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWH---LSPNQESL---ITSVVFAGMLVGAYSWGIVSDNFGRRKGFL 98 (514)
Q Consensus 25 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~s~~~~g~---i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~ 98 (514)
++++..+...++++++++++...++++.|.+.++++ .+..+.+. +.++..++..++++++|+++||+|||+++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~ 97 (432)
T PRK10406 18 RRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSML 97 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 345556677778899999999999999999999985 55554444 444455555599999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhHH--------HHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHH
Q 010268 99 ITAIVTSAAGLLSAFAPNYY--------LLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEA 169 (514)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~ 169 (514)
.+.++++++.+++++++++. .++++|+++|++.|.. +...+++.|++|+++|+++.++...+...|.++++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~ 177 (432)
T PRK10406 98 ISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLAL 177 (432)
T ss_pred HHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988764 5889999999999987 77889999999999999999999988888888888
Q ss_pred HHHHHHh--------cccchHHHHHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCc
Q 010268 170 GIAWLVM--------PRLGWRWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSD 241 (514)
Q Consensus 170 ~i~~~l~--------~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
.+...+. +.+|||.+|++.+++.++..++...+||+|++.. ++ . +
T Consensus 178 ~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~--------~~----~---~------------ 230 (432)
T PRK10406 178 LVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQET--------RA----L---K------------ 230 (432)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHH--------hh----h---c------------
Confidence 7665543 2579999999988877766555555666543210 00 0 0
Q ss_pred hhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHH
Q 010268 242 WEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGN 321 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 321 (514)
+ ..+++++++++ +..+......+..
T Consensus 231 ---------------------------------------~--------------~~~~~~l~~~~--~~~~~~~~~~~~~ 255 (432)
T PRK10406 231 ---------------------------------------E--------------AGSLKGLWRNR--RAFIMVLGFTAAG 255 (432)
T ss_pred ---------------------------------------c--------------cccHHHHHhhH--HHHHHHHHHHHHH
Confidence 0 00233344332 1122222223334
Q ss_pred HHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhh
Q 010268 322 AFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPL 401 (514)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 401 (514)
...++....|.|.+..+. .+.+....+....+..+...++..+.|+++||++||+.+..+..+.++....+
T Consensus 256 ~~~~~~~~~~lp~~l~~~---------~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~ 326 (432)
T PRK10406 256 SLCFYTFTTYMQKYLVNT---------AGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPI 326 (432)
T ss_pred HHHHHHHHHHHHHHHHHh---------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHH
Confidence 566777778888876432 12555555666667677778888899999999999988776655443332211
Q ss_pred h--c--ccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHH-hHhHHHHHHHHHHhhcCchhH-
Q 010268 402 L--F--QQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRI-GGMVCPLVAVALVHGCHQTAA- 475 (514)
Q Consensus 402 ~--~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~~~p~i~g~l~~~~g~~~~- 475 (514)
. . ..+......+..+..++.+...+..+.+.+|.+|++.|++++|+.+.++++ ++...|.+.+.+ +..|.+..
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~ 405 (432)
T PRK10406 327 LSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAF 405 (432)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHH
Confidence 1 1 112222222222222233333445667889999999999999999988774 355588888855 55564443
Q ss_pred HHHHHHHHHHHHHHhhc
Q 010268 476 LILFELVILLSGISVLL 492 (514)
Q Consensus 476 ~~~~~~~~~~~~~~~~~ 492 (514)
++..+++.+++.+..++
T Consensus 406 ~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 406 FWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44444444555444443
No 20
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=3e-35 Score=287.88 Aligned_cols=387 Identities=26% Similarity=0.376 Sum_probs=290.3
Q ss_pred hCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHH
Q 010268 21 MGFGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLIT 100 (514)
Q Consensus 21 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~ 100 (514)
...++++|..+..+.+.++..+++....++..|.+.+++|.+..+.|++.+...++..++.++.|+++||+|||+.+..+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~ 88 (398)
T TIGR00895 9 QPLSRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWS 88 (398)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHH
Confidence 34456677777777778888888888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 010268 101 AIVTSAAGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRL 179 (514)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~ 179 (514)
.++..++.++..++++++.+++.|++.|++.+.. +...+++.|++|+++|++++++...+..+|..+++.+++.+.+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 168 (398)
T TIGR00895 89 ILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF 168 (398)
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999887 777799999999999999999999999999999999999999989
Q ss_pred chHHHHHHhHHHHHHH-HHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCC
Q 010268 180 GWRWLLGLSAFPSSLL-LLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNE 258 (514)
Q Consensus 180 gw~~~f~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (514)
||+..|++.++..++. .+..+++||++++...+ +.++..+..++....... ++
T Consensus 169 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-------------------------~~ 222 (398)
T TIGR00895 169 GWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQA-------------------------EA 222 (398)
T ss_pred cceeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhccc-------------------------cc
Confidence 9999999886555554 44566788876543322 222222221111110000 00
Q ss_pred CCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 010268 259 DDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNG 338 (514)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (514)
++.. .++ ++++ +......+.+++++..+..+..+...++....++....+.|.+..+
T Consensus 223 ~~~~----~~~-------~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (398)
T TIGR00895 223 QSAL----PEQ-------KATQ------------GTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVE 279 (398)
T ss_pred cccc----ccc-------cccc------------chhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 000 0000 0000123334444445555555555556666666777777766654
Q ss_pred ccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHH
Q 010268 339 QNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGAR 418 (514)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 418 (514)
.+ .+....+.......++.++++++.+++.||+++|+.............+......+.+......++.+
T Consensus 280 ~g----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 349 (398)
T TIGR00895 280 LG----------FSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAG 349 (398)
T ss_pred cC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence 43 66667778888889999999999999999999985444443333333333332445555666777888
Q ss_pred hhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHH
Q 010268 419 ICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVAL 466 (514)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l 466 (514)
++.+...+...++..|.+|++.|++++|+.+.+..+|..++|.+.|.+
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 350 FFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 888888899999999999999999999999999999999999999975
No 21
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=2.8e-35 Score=285.85 Aligned_cols=377 Identities=15% Similarity=0.114 Sum_probs=278.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHH
Q 010268 27 QLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSA 106 (514)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~ 106 (514)
.|.....++++.+.... ....+++.|.+.+++|+|..+.|++.+.+.+++.+++++.|+++||+|||+++..+..+.++
T Consensus 8 ~~~~~~~~~~~~~~~~~-~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~ 86 (393)
T PRK09705 8 NFMLLVLVLIGLNMRPL-LTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAV 86 (393)
T ss_pred HHHHHHHHHHHHHcchh-hhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHH
Confidence 34444444444333322 36678999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhccc-chHHH
Q 010268 107 AGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRL-GWRWL 184 (514)
Q Consensus 107 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~-gw~~~ 184 (514)
+.++++++++++.+++.|+++|++.+.. +....++.++++ ++|+++++++..+..+|..+++.+++++.++. +||..
T Consensus 87 ~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~ 165 (393)
T PRK09705 87 GALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQT 165 (393)
T ss_pred HHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 9999999999999999999999999987 555678888886 78999999999999999999999999988875 89998
Q ss_pred HHHhHHHHHHHHHHHHHccC-ChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCc
Q 010268 185 LGLSAFPSSLLLLLYSVTPE-SPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTP 263 (514)
Q Consensus 185 f~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (514)
+.+.++..++..+.++...+ .|+ ++++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~----------------------------------------------- 193 (393)
T PRK09705 166 LAWWALPAVVALFAWWWQSAREVA-----SSHK----------------------------------------------- 193 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCc-----cccC-----------------------------------------------
Confidence 87766655544333322211 110 0000
Q ss_pred cccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccc
Q 010268 264 KEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCV 343 (514)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (514)
++ .. ..+.++++ ..+......+.....++....|.|.+..+.+
T Consensus 194 ------~~----------~~--------------~~~~l~~~----~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g--- 236 (393)
T PRK09705 194 ------TT----------TT--------------PVRVVFTP----RAWTLGVYFGLINGGYASLIAWLPAFYIEIG--- 236 (393)
T ss_pred ------CC----------cC--------------CcccccCH----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---
Confidence 00 00 00011112 2223333444445566677778887775543
Q ss_pred cccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcc
Q 010268 344 SNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITV 423 (514)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 423 (514)
.+...++...++..++.++++++.+++.||++||+....+..+.+++.+.+...++... .....+.+++.+.
T Consensus 237 -------~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~l~g~g~g~ 308 (393)
T PRK09705 237 -------ASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLP-VLWAMVCGLGLGG 308 (393)
T ss_pred -------CChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHH-HHHHHHHHHhccc
Confidence 77777888889999999999999999999999999888887777666554432222211 2223455677777
Q ss_pred cccceeeccccccC-cchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCch-hHHHHHHHHHHHHHHHhhcccccccCcC
Q 010268 424 TFTVVYVYAPEIYP-TSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQT-AALILFELVILLSGISVLLFPFETTGRG 501 (514)
Q Consensus 424 ~~~~~~~~~~~~~p-~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (514)
.++.......+..+ ++.+++.+|+.+.+.+++..++|.+.|++.|..|.+ ..+.+..+++++..++.+.+.||++++.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 309 AFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred hHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 77776666667664 578999999999999999999999999999998744 4455556666666666667777777665
Q ss_pred C
Q 010268 502 L 502 (514)
Q Consensus 502 ~ 502 (514)
.
T Consensus 389 ~ 389 (393)
T PRK09705 389 W 389 (393)
T ss_pred h
Confidence 4
No 22
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=2e-35 Score=286.92 Aligned_cols=359 Identities=17% Similarity=0.146 Sum_probs=267.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHH
Q 010268 39 ISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYY 118 (514)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~ 118 (514)
.........++++.|.+.+++|+|..+.|++.+++.+++.+++++.|+++||+|||+++.++.++.+++.++++++++++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~ 92 (377)
T TIGR00890 13 CFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLA 92 (377)
T ss_pred HHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHH
Confidence 33444466788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHH
Q 010268 119 LLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLL 197 (514)
Q Consensus 119 ~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~ 197 (514)
.+++.|++.|++.+.. +.....+.+++| ++|+++.++...+.++|..+++++.+.+.+..|||+.|++.+++.++..+
T Consensus 93 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 171 (377)
T TIGR00890 93 ALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIV 171 (377)
T ss_pred HHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 9999999999999876 566677788876 67999999999999999988777777777778999999999888877765
Q ss_pred HH-HHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHh
Q 010268 198 LY-SVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEA 276 (514)
Q Consensus 198 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (514)
.. ++++++|+.. .+++.+ .+ +
T Consensus 172 ~~~~~~~~~~~~~-~~~~~~----------------------------------------------------~~-~---- 193 (377)
T TIGR00890 172 LGAFLIGYPPGQL-IKTNIE----------------------------------------------------VS-V---- 193 (377)
T ss_pred HHHHheecCchhc-cccCcc----------------------------------------------------cc-h----
Confidence 54 4444432100 000000 00 0
Q ss_pred hhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCc
Q 010268 277 KEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDIN 356 (514)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (514)
+....++.++++..+. .....+...........+.+.+.++.+ .+....
T Consensus 194 ------------------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 242 (377)
T TIGR00890 194 ------------------KDYTVWEMLRTPQFWV---LYLSFFLNAVSGLLLIGLYKPYGQSLG----------LSDGFL 242 (377)
T ss_pred ------------------hhhhHHHHHcCccHHH---HHHHHHHHhHHHHHHHHHHHHHHHHcC----------CCHHHH
Confidence 0001222333322222 222222222222223333343433222 555556
Q ss_pred ccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCc--chhHHHHHHHHhhhcccccceeecccc
Q 010268 357 YGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPK--GLTTGLLFGARICITVTFTVVYVYAPE 434 (514)
Q Consensus 357 ~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~ 434 (514)
+....+..++.++++++.|++.||++||+.+..+..+.+++.+.+...++. .......++.+++.+...+....+..|
T Consensus 243 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~ 322 (377)
T TIGR00890 243 VLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSD 322 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHH
Confidence 777888889999999999999999999999888888877777666554432 222334456667777777777888999
Q ss_pred ccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHH
Q 010268 435 IYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSG 487 (514)
Q Consensus 435 ~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~ 487 (514)
.+|+++|+++.|+.+....+|..++|.+.|.+.+..|+...+.+.+++.+++.
T Consensus 323 ~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 323 IFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999998888877776665543
No 23
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=9.9e-35 Score=282.61 Aligned_cols=374 Identities=12% Similarity=0.120 Sum_probs=290.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHH
Q 010268 26 FQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTS 105 (514)
Q Consensus 26 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~ 105 (514)
++++....++++++..+......++..|.+.+++|+|.++.+++.+.+.+++.+++++.|++.||+|||+++..+.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMI 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 45566667778888998989999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc-ccchHH
Q 010268 106 AAGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMP-RLGWRW 183 (514)
Q Consensus 106 ~~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~-~~gw~~ 183 (514)
++.++..++++++.+++.|++.|++.+.. +...+++.|++|+++|+++++..+....+|..++|.+.+.+.. ..|||+
T Consensus 84 i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~ 163 (394)
T PRK03699 84 LAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYW 163 (394)
T ss_pred HHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHH
Confidence 99999999999999999999999999877 6677889999999999999999999999999999999887754 579999
Q ss_pred HHHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCc
Q 010268 184 LLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTP 263 (514)
Q Consensus 184 ~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (514)
.|.+.+++.++..++.++ .+.|+. +++.+ +
T Consensus 164 ~f~~~~~~~~~~~~~~~~-~~~p~~---~~~~~--~-------------------------------------------- 193 (394)
T PRK03699 164 VYACIGLVYVAIFILTLF-SEFPAL---GKHAP--K-------------------------------------------- 193 (394)
T ss_pred HHHHHHHHHHHHHHHHHh-cCCccc---cccCc--c--------------------------------------------
Confidence 999888777666544333 222210 00000 0
Q ss_pred cccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccc
Q 010268 264 KEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCV 343 (514)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (514)
+++ + ..+ ....+.++......++....++....|.|.+.++.
T Consensus 194 ----~~~---~-----------------------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~---- 235 (394)
T PRK03699 194 ----ADK---P-----------------------VAK----EKWGIGVLFLAIAALLYILAQLTFISWVPEYAQKK---- 235 (394)
T ss_pred ----ccC---c-----------------------ccc----ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 000 0 000 00012334444445555566667778888887443
Q ss_pred cccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcc
Q 010268 344 SNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITV 423 (514)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 423 (514)
.+.+..+++...+...++..+++++.+++.||+++|+.+.....+.++.+..+...++.+...+..++.|++.+.
T Consensus 236 -----~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 310 (394)
T PRK03699 236 -----FGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSA 310 (394)
T ss_pred -----cCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHH
Confidence 137777778888888889999999999999999999988877776666655555555555555666777777777
Q ss_pred cccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcc
Q 010268 424 TFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLF 493 (514)
Q Consensus 424 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 493 (514)
.++...+...+..| +.+++..|......++|..++|.+.|.+.+..|+...++..+++.+++.+.....
T Consensus 311 ~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (394)
T PRK03699 311 IYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILL 379 (394)
T ss_pred HHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHH
Confidence 77777777777776 4467788999999999999999999999999998888887777776665544433
No 24
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=1.6e-34 Score=282.24 Aligned_cols=363 Identities=17% Similarity=0.082 Sum_probs=269.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-hhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHH
Q 010268 30 VLAYAGMGWISEAMEMMLLSFVGPA-VQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAG 108 (514)
Q Consensus 30 ~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~ 108 (514)
.+..+.+..+...++..+..+++|. +.+++|.|+.+.|++.+++.+++.+++++.|+++||+|||++++.+.++.+++.
T Consensus 16 ~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~ 95 (399)
T PRK05122 16 RIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSG 95 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHH
Confidence 3444556667777777888888886 568899999999999999999999999999999999999999999998887776
Q ss_pred HHHhhh--------hhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 010268 109 LLSAFA--------PNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRL 179 (514)
Q Consensus 109 ~~~~~~--------~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~ 179 (514)
+.+.++ .+++.+++.|++.|++.+.. +...+++.|++|+++|++++++...+..+|.++++.+++.+.+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 175 (399)
T PRK05122 96 LLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWG 175 (399)
T ss_pred HHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcc
Confidence 655443 25678899999999999988 666788899999999999999999999999999999999999999
Q ss_pred chHHHHHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCC
Q 010268 180 GWRWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNED 259 (514)
Q Consensus 180 gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (514)
||+..+++.++..++..+.....|++++ + +.+ +.
T Consensus 176 g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~--~~--------------------------------------- 209 (399)
T PRK05122 176 GLAGLGLLIMLLALLGLLLARPRPAVPP----V-KGE--RL--------------------------------------- 209 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcCCCCCC----C-Ccc--ch---------------------------------------
Confidence 9999988766655444333322222110 0 000 00
Q ss_pred CCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 010268 260 DTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQ 339 (514)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (514)
+++..+++ .++.. .......+.+.....+.+.+..+.
T Consensus 210 --------------------------------------~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 246 (399)
T PRK05122 210 --------------------------------------PFRRVLGR-VWPYG----MGLALASIGFGTIATFITLYYAAR 246 (399)
T ss_pred --------------------------------------hHHHHHHH-HHHHH----HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 01111111 11111 111122223333444555544322
Q ss_pred cccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHh
Q 010268 340 NKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARI 419 (514)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 419 (514)
+ . ...+.......++.++++++.+++.||+++|+.+..+..+.++..+.+...++.+...+..++.|+
T Consensus 247 ~----------~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 314 (399)
T PRK05122 247 G----------W--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGF 314 (399)
T ss_pred c----------c--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 2 2 233455667778889999999999999999998888888777777666666666666666777888
Q ss_pred hhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcc
Q 010268 420 CITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLF 493 (514)
Q Consensus 420 ~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 493 (514)
+.+..++.......|..|++.|++++|+.+....+|..++|.+.|.+.++.|+...+.+.+++.+++.++..+.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (399)
T PRK05122 315 GFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLL 388 (399)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 88877777777778899999999999999999999999999999999999998888888777777766665544
No 25
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=2.5e-34 Score=283.12 Aligned_cols=358 Identities=20% Similarity=0.267 Sum_probs=249.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHH-HHH-----HHHHHHhhhhHHhhhhhhCChHHHHHH
Q 010268 27 QLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLIT-SVV-----FAGMLVGAYSWGIVSDNFGRRKGFLIT 100 (514)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~-s~~-----~~~~~i~~~~~G~l~Dr~G~r~~l~~~ 100 (514)
+++....++++.+++++++..++++.|.+.++++.+..+.+.+. +.. .++..+++++.|+++||+|||+.++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 44567788889999999999999999999999999888865443 322 223347889999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhHH--------HHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHH
Q 010268 101 AIVTSAAGLLSAFAPNYY--------LLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGI 171 (514)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i 171 (514)
.++..++.++++++++++ .++++|+++|++.+.. +....++.|++|+++|++++++...+.++|..+++.+
T Consensus 93 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~ 172 (434)
T PRK15075 93 LSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALL 172 (434)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999877 4688999999999987 6677899999999999999999999988888888888
Q ss_pred HHHHh--------cccchHHHHHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchh
Q 010268 172 AWLVM--------PRLGWRWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWE 243 (514)
Q Consensus 172 ~~~l~--------~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (514)
++.+. +.+|||++|++..+...+........||++++...++ +.
T Consensus 173 g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~-----------------~~----------- 224 (434)
T PRK15075 173 GYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARKH-----------------RP----------- 224 (434)
T ss_pred HHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhh-----------------cc-----------
Confidence 77652 4689999998754432222222212222211000000 00
Q ss_pred hhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHH
Q 010268 244 HELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAF 323 (514)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 323 (514)
+ ....++...+. ++..+..+...+....
T Consensus 225 ---------------------------------------~-----------~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 252 (434)
T PRK15075 225 ---------------------------------------S-----------MREIFRSLAAN--WRIVLAGMLMVAMTTV 252 (434)
T ss_pred ---------------------------------------c-----------cccHHHHHHHh--HHHHHHHHHHHHHHHH
Confidence 0 00011111111 1222222333334455
Q ss_pred HHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh-hh-
Q 010268 324 SYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLV-PL- 401 (514)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~-~~- 401 (514)
.++....|.|.+.++. .+.+..+.++...+..++.+++.++.|+++||+|||+.+..+..+.++... .+
T Consensus 253 ~~~~~~~~~p~~l~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 323 (434)
T PRK15075 253 SFYLITVYTPTFGKTV---------LHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALS 323 (434)
T ss_pred HHHHHHHHHHHHHHHh---------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 6667778888877542 126666666777778888999999999999999999987766544432221 11
Q ss_pred hc-c-cCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHH-HhHhHHHHHHHHHHhhcCch
Q 010268 402 LF-Q-QPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGR-IGGMVCPLVAVALVHGCHQT 473 (514)
Q Consensus 402 ~~-~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~~~p~i~g~l~~~~g~~ 473 (514)
.. . .+........++.+++.+...+..+.+..|.+|++.|+++.|+.+.+.. +++.++|.+.|.+.|+.|+.
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 324 WLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 11 1 1222222223444555555556666788999999999999999766665 45888999999999998853
No 26
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=6.1e-34 Score=276.14 Aligned_cols=367 Identities=14% Similarity=0.119 Sum_probs=269.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHH
Q 010268 26 FQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTS 105 (514)
Q Consensus 26 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~ 105 (514)
..|..+..+....+............+|.+.+++|.|+++.|+..+++.++..+++++.|+++||+|||++++.+.++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~ 96 (394)
T PRK10213 17 PNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLT 96 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHH
Confidence 35555555555544455555566667899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHH
Q 010268 106 AAGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWL 184 (514)
Q Consensus 106 ~~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~ 184 (514)
++.+++.++++++.+++.|++.|++.+.. +...+++.|++|+++|++++++...+.++|.+++|++++.+.+.+|||+.
T Consensus 97 ~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~ 176 (394)
T PRK10213 97 LSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNV 176 (394)
T ss_pred HHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHH
Confidence 99999999999999999999999999988 77778999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCc
Q 010268 185 LGLSAFPSSLLLLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTP 263 (514)
Q Consensus 185 f~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (514)
|++.++++++..+. ....||.|+. +.+ ..
T Consensus 177 f~~~~~l~~~~~l~~~~~~p~~~~~-----~~~-~~-------------------------------------------- 206 (394)
T PRK10213 177 FNAAAVMGVLCIFWIIKSLPSLPGE-----PSH-QK-------------------------------------------- 206 (394)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCcc-----ccc-ch--------------------------------------------
Confidence 99988766655443 3335554210 000 00
Q ss_pred cccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCcccc
Q 010268 264 KEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLL-TTELNNGQNKC 342 (514)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 342 (514)
...+..++++..+... ...+......+....+ .|.+.++.+
T Consensus 207 ---------------------------------~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~g-- 248 (394)
T PRK10213 207 ---------------------------------QNTFRLLQRPGVMAGM---IAIFMSFAGQFAFFTYIRPVYMNLAG-- 248 (394)
T ss_pred ---------------------------------hHHHHHhcCHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcC--
Confidence 0111223332222221 1222222223333333 355554333
Q ss_pred ccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhc
Q 010268 343 VSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICIT 422 (514)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 422 (514)
.+....+......+++.+++.++.+++.||.+++.......+..+..+++....++.+......++.|++.+
T Consensus 249 --------~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~ 320 (394)
T PRK10213 249 --------FGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFA 320 (394)
T ss_pred --------CChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 777777788888889999999999999999654443443333333333433344455666667778888888
Q ss_pred ccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q 010268 423 VTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGIS 489 (514)
Q Consensus 423 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 489 (514)
...+...+++.+..| +.+++..+......++|..+||.+.|.+.|..|....+...+++.++..+.
T Consensus 321 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 386 (394)
T PRK10213 321 LVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALL 386 (394)
T ss_pred hhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHHH
Confidence 888888888888887 556777888888889999999999999999988877776666555444433
No 27
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=3e-34 Score=282.32 Aligned_cols=381 Identities=20% Similarity=0.249 Sum_probs=263.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhc--CCCcchhHHHH-----HHHHHHHHHhhhhHHhhhhhhCChHHH
Q 010268 26 FQLCVLAYAGMGWISEAMEMMLLSFVGPA-VQSLW--HLSPNQESLIT-----SVVFAGMLVGAYSWGIVSDNFGRRKGF 97 (514)
Q Consensus 26 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~--~~s~~~~g~i~-----s~~~~~~~i~~~~~G~l~Dr~G~r~~l 97 (514)
++++.+...++++++++++...++.+.|. +.+++ +.++. .+++. ++..++..+++++.|+++||+|||+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 34556777888999999999999988875 45555 67776 46654 345566789999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhHH--------HHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHH
Q 010268 98 LITAIVTSAAGLLSAFAPNYY--------LLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILE 168 (514)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~ 168 (514)
+++.++++++.+++++++++. .++++|+++|++.|.. +....++.|++|+++|++..+..+.+..+|.+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~ 177 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLS 177 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987 5888999999999988 7777899999999999999999999999999998
Q ss_pred HHHHHHHh--------cccchHHHHHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCC
Q 010268 169 AGIAWLVM--------PRLGWRWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVS 240 (514)
Q Consensus 169 ~~i~~~l~--------~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
+.+...+. ..+|||..|++.+++.++...+....||+|++...+++.++.
T Consensus 178 ~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~~---------------------- 235 (438)
T PRK09952 178 TGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAAA---------------------- 235 (438)
T ss_pred HHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcccc----------------------
Confidence 87776654 257999999998877665554455567766432111000000
Q ss_pred chhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHH
Q 010268 241 DWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFG 320 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 320 (514)
++ +....+.+++++ +.........++
T Consensus 236 -----------------------------~~-----------------------~~~~~~~l~~~~--~~~~~~~~~~~~ 261 (438)
T PRK09952 236 -----------------------------KK-----------------------RIPVIEALLRHP--GAFLKIIALRLC 261 (438)
T ss_pred -----------------------------cc-----------------------cCCHHHHHHHch--HHHHHHHHHHHH
Confidence 00 000111122221 122222233344
Q ss_pred HHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhh
Q 010268 321 NAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVP 400 (514)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 400 (514)
....+|....|.|.+..+.. +.+.........+.++..+++.++.|+++||+|||+.+..+.++.+++.+.
T Consensus 262 ~~~~~~~~~~~~~~y~~~~~---------g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~ 332 (438)
T PRK09952 262 ELLTMYIVTAFALNYSTQNL---------GLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFP 332 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhc---------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 45566666667776653221 134333233344556677888889999999999999888776655544332
Q ss_pred hhc---ccC-cchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHH-HhHhHHHHHHHHHHhhcC--ch
Q 010268 401 LLF---QQP-KGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGR-IGGMVCPLVAVALVHGCH--QT 473 (514)
Q Consensus 401 ~~~---~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~~~p~i~g~l~~~~g--~~ 473 (514)
+.. ..+ .+......++.+++.+...+..+++..|.+|.+.|+++.|+.+..+. +++.++|.+.|++.+..+ +.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~ 412 (438)
T PRK09952 333 FFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWH 412 (438)
T ss_pred HHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCch
Confidence 221 222 22223334445566666677788999999999999999999776655 899999999999988543 44
Q ss_pred hHHHHHHHHHHHHHHHhhc
Q 010268 474 AALILFELVILLSGISVLL 492 (514)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~ 492 (514)
..+.+.+++.+++++..+.
T Consensus 413 ~~~~~~~~~~~i~~v~~~~ 431 (438)
T PRK09952 413 SVAIYLLAGCLISAMTALL 431 (438)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 5555555555555555443
No 28
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=7.9e-35 Score=285.80 Aligned_cols=383 Identities=15% Similarity=0.062 Sum_probs=291.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhh----
Q 010268 38 WISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAF---- 113 (514)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~---- 113 (514)
.+...+......+..|.+.++++.++.+.|++.+.+.++..+++++.|+++||+|||+++..+..+.+++.+....
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~ 105 (417)
T PRK10489 26 RFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFL 105 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHc
Confidence 4455556667788889999999999999999999999999999999999999999999999888877776665432
Q ss_pred -hhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHH
Q 010268 114 -APNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFP 191 (514)
Q Consensus 114 -~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~ 191 (514)
.++++.+++.|++.|++.+.. +...+++.++.|+++|+++.++.....++|..+||.+++.+.+..+|++.|++.++.
T Consensus 106 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~ 185 (417)
T PRK10489 106 PEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAG 185 (417)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 467888999999999998877 666788999999999999999999999999999999999998888999999988877
Q ss_pred HHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCC
Q 010268 192 SSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDED 271 (514)
Q Consensus 192 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (514)
.++..+..+.+|+.++.. +++.+. .++
T Consensus 186 ~~~~~~~~~~l~~~~~~~--~~~~~~----~~~----------------------------------------------- 212 (417)
T PRK10489 186 TFITLLPLLRLPALPPPP--QPREHP----LRS----------------------------------------------- 212 (417)
T ss_pred HHHHHHHHHhCCCCCCCC--cccccc----hHH-----------------------------------------------
Confidence 777666666777653210 000000 000
Q ss_pred chhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCC
Q 010268 272 SISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGK 351 (514)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (514)
....++.+++++..+......... . .......+.|.+.++. .+.
T Consensus 213 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~p~~~~~~---------~g~ 256 (417)
T PRK10489 213 -----------------------LLAGFRFLLASPVVGGIALLGGLL---T-MASAVRVLYPALADEV---------WQM 256 (417)
T ss_pred -----------------------HHHHHHHHHcChHHHHHHHHHHHH---H-HHHhHHHhhHHHHHhc---------cCC
Confidence 001334444444333332222211 1 1233445666666542 126
Q ss_pred cccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeec
Q 010268 352 SRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVY 431 (514)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 431 (514)
+....+.......++.+++.++.+++.||.++++.+..+.++.++..+.+...++.+...+..++.|++.+...+...++
T Consensus 257 ~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 336 (417)
T PRK10489 257 GAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTL 336 (417)
T ss_pred ChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66667788888889999999999999999877777777777777766666555555555566666777776666777788
Q ss_pred cccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcccccccCcCCCCCCCCC
Q 010268 432 APEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFPFETTGRGLSDSLPSS 509 (514)
Q Consensus 432 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (514)
..|..|++.||+++|+.+....+|..++|.+.|.+.+..|....+...+++.++.+++.....++.|+++.+|.+++.
T Consensus 337 ~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (417)
T PRK10489 337 LQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEVDA 414 (417)
T ss_pred HHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccccccccccccCCC
Confidence 999999999999999999999999999999999999999988888888888777777777777888888777766654
No 29
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=4.7e-34 Score=287.25 Aligned_cols=410 Identities=19% Similarity=0.297 Sum_probs=278.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHH
Q 010268 24 GKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIV 103 (514)
Q Consensus 24 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~ 103 (514)
++.+|+.+..++++++.+.++....++..|.+.+++|+|..+.+++.+.+.+++.+++++.|+++||+|||++++++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 94 (496)
T PRK03893 15 NRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVL 94 (496)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 45677788888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 010268 104 TSAAGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWR 182 (514)
Q Consensus 104 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~ 182 (514)
.+++.++++++++++.+++.|++.|++.+.. +....++.|++|+++|++++++...+..+|..++|.+++.+.+.++||
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~ 174 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWR 174 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 9999999999999999999999999998877 777789999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCC
Q 010268 183 WLLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTT 262 (514)
Q Consensus 183 ~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (514)
+.|++..+..++.++....+||++++...+++.++.++..+....
T Consensus 175 ~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------- 219 (496)
T PRK03893 175 ALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYR----------------------------------- 219 (496)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhc-----------------------------------
Confidence 999876555544444445566654332111110000000000000
Q ss_pred ccccccCCCchhHhhhhccC--CccccccccccchhhH-------------HHHhhChhHHHHHHHHHHHHHHHHHHHHH
Q 010268 263 PKEMARDEDSISEAKEMKSE--DSTSTLANSNMGGITA-------------LLILLSPELIKSTLLLWLVFFGNAFSYYG 327 (514)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (514)
.+............ .-...........+.. +....+.+.++.........+......+.
T Consensus 220 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (496)
T PRK03893 220 ------GEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWP 293 (496)
T ss_pred ------chhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccch
Confidence 00000000000000 0000000000000000 00000000011111111111111111223
Q ss_pred HHHHHHHhhc-CccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccC
Q 010268 328 LVLLTTELNN-GQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQP 406 (514)
Q Consensus 328 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (514)
...+.|.+.+ +. +.+....+...+...++.++++++.|++.||+++|+.+..+..+..+..+.+....+
T Consensus 294 ~~~~lp~~l~~~~----------g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 363 (496)
T PRK03893 294 IQALLPTYLKTDL----------GYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGG 363 (496)
T ss_pred HHHHHHHHHHhhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccc
Confidence 4456777663 33 377777788888899999999999999999999999888777666555443332222
Q ss_pred c--chhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHH
Q 010268 407 K--GLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVIL 484 (514)
Q Consensus 407 ~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~ 484 (514)
. +......++.++...+..+....++.|.+|++.|++++|+.+....+|+.++|.+.|.+.|..|+...+...++...
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~ 443 (496)
T PRK03893 364 ANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLT 443 (496)
T ss_pred cHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHH
Confidence 2 22222233333333344566677889999999999999999999999999999999999999988777655554443
No 30
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=2e-34 Score=285.24 Aligned_cols=398 Identities=15% Similarity=0.156 Sum_probs=271.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHH
Q 010268 24 GKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIV 103 (514)
Q Consensus 24 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~ 103 (514)
++++|.++..+++.+...+.++..+++..|.+.++ |+|..+.|++.+.+.+++.+++++.|+++||+|||++++++.++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~ 102 (452)
T PRK11273 24 RRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL 102 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHH
Confidence 45567666667777777777777788889999888 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhh----hHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHH-HHHHHHHHHhc
Q 010268 104 TSAAGLLSAFAP----NYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTI-LEAGIAWLVMP 177 (514)
Q Consensus 104 ~~~~~~~~~~~~----~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~~~~i~~~l~~ 177 (514)
.+++.+++++++ +++.+++.|++.|++.+.. +.....+.+++|+++|++++++++.+.++|.. .+|+++..+..
T Consensus 103 ~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 182 (452)
T PRK11273 103 AAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW 182 (452)
T ss_pred HHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 999998887763 6788899999999998887 66667888999999999999999999999874 45554444433
Q ss_pred ccchHHHHHHhHHHHHHH-HHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCC
Q 010268 178 RLGWRWLLGLSAFPSSLL-LLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSS 256 (514)
Q Consensus 178 ~~gw~~~f~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (514)
..|||+.|++.+++.++. ++..+++||+|+....++ .++.+ ...
T Consensus 183 ~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~-------~~~--------------------------- 227 (452)
T PRK11273 183 FNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPP-IEEYK-------NDY--------------------------- 227 (452)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCC-hhhhh-------hcc---------------------------
Confidence 459999999988777665 444667788764211000 00000 000
Q ss_pred CCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHH-HHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010268 257 NEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITAL-LILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTEL 335 (514)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (514)
+++.+++++ +++ .....+ +.++++ +.++...+..++.....+....|.|.+
T Consensus 228 ------~~~~~~~~~--------~~~-----------~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~P~~ 279 (452)
T PRK11273 228 ------PDDYNEKHE--------QEL-----------TAKQIFMQYVLPN---KLLWYIAIANVFVYLLRYGILDWSPTY 279 (452)
T ss_pred ------ccccccccC--------CCc-----------cHHHHHHHHHHcC---hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000000 000 000011 123333 334444455555555666777788888
Q ss_pred hcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHH--hhHHHH-HHHHHHHHHHhhhhhc--ccCcchh
Q 010268 336 NNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRL--GRKLSM-SSMFFCCCIFLVPLLF--QQPKGLT 410 (514)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~--g~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~ 410 (514)
.++.. +++...++....+..++.+++.++.|+++||+ +||... .....+..+..+.+.. ..+.+..
T Consensus 280 l~~~~---------g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 350 (452)
T PRK11273 280 LKEVK---------HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVD 350 (452)
T ss_pred HHHhc---------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHH
Confidence 75431 26666666777788888999999999999999 444432 2222222222222222 2222333
Q ss_pred HHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhH-HHHHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q 010268 411 TGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMV-CPLVAVALVHGCHQTAALILFELVILLSGIS 489 (514)
Q Consensus 411 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~-~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 489 (514)
.+..+..+.+..........+..|.+|++.+|+++|+.+....+|+.+ +|.+.|.+.|+.|+...|.+.+++++++++.
T Consensus 351 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~ 430 (452)
T PRK11273 351 MACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVIL 430 (452)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 333344444333322333445679999999999999999998888765 7999999999999888888888777777666
Q ss_pred hhccc
Q 010268 490 VLLFP 494 (514)
Q Consensus 490 ~~~~~ 494 (514)
...+.
T Consensus 431 ~~~~~ 435 (452)
T PRK11273 431 LIVVM 435 (452)
T ss_pred HHHHh
Confidence 55443
No 31
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=1.2e-34 Score=283.61 Aligned_cols=383 Identities=20% Similarity=0.205 Sum_probs=273.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhH
Q 010268 38 WISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNY 117 (514)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~ 117 (514)
++...++...++...|.+.+++|.|..+.|++.+++.++..+++++.|+++||+|||+++.++.++.+++.++.++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 82 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAY 82 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCH
Confidence 45677888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHH
Q 010268 118 YLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLL 196 (514)
Q Consensus 118 ~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~ 196 (514)
+.+++.|++.|++.+.. +....++.|++|+++|++++++.+...++|.+++|.+++.+.+..+||+.|++.+++.++..
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 162 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWG 162 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 99999999999999888 77779999999999999999999999999999999999999888999999999888877765
Q ss_pred HHH-HHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhH
Q 010268 197 LLY-SVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISE 275 (514)
Q Consensus 197 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (514)
+.. ++.||+|+.. +...++.++...+ . ...+ . ++
T Consensus 163 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~----------------------------------~~~~----~---~~ 197 (399)
T TIGR00893 163 VLWLKFIPDPPQKA--KWLTEEEKYIVVG--G----------------------------------LLAE----Q---QG 197 (399)
T ss_pred HHhhheecCCCCcc--ccCCHHHHhhcch--h----------------------------------hccc----c---cc
Confidence 554 4455554211 0000000000000 0 0000 0 00
Q ss_pred hhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccC
Q 010268 276 AKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDI 355 (514)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (514)
+++ .+......++.++++ .++......+...........+.|.+..+.. +.+...
T Consensus 198 -~~~------------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 252 (399)
T TIGR00893 198 -KGP------------STPKKYQIKELLKDR---RVWGLALGQFLVNIGLGFFLTWFPTYLVQER---------GLSILE 252 (399)
T ss_pred -ccc------------cCCCccchHHHhcCH---HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHh---------cccHHH
Confidence 000 000011333444432 3344444455555556666667776654321 266666
Q ss_pred cccchhhhhhchhhHHHHHHHHHHHHhhHH--HHHHHHH--HH-H-HHhhhhhc--ccCcchhHHHHHHHHhhhcccccc
Q 010268 356 NYGDVFITSFAEFPGLLLAAAMVDRLGRKL--SMSSMFF--CC-C-IFLVPLLF--QQPKGLTTGLLFGARICITVTFTV 427 (514)
Q Consensus 356 ~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~--~~~~~~~--~~-~-~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~ 427 (514)
.+.......++.+++.++.+++.||++||+ ....... .. . ........ ..+.+. .......+.+..+..+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 331 (399)
T TIGR00893 253 AGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYA-ALALVALGFFGLGAGAI 331 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHH-HHHHHHHHHhchhhhhH
Confidence 778888888999999999999999999985 1111111 11 1 11111111 112222 22233333333346788
Q ss_pred eeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcC-chhHHHHHHHHHHHHHHHhh
Q 010268 428 VYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCH-QTAALILFELVILLSGISVL 491 (514)
Q Consensus 428 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 491 (514)
..++..|.+|++.|++++|+.+.+..+|..++|.+.|.+.|..| +...+.+.+++.+++.+..+
T Consensus 332 ~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 332 GWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999988 66677777666666555543
No 32
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=5.2e-34 Score=283.04 Aligned_cols=391 Identities=13% Similarity=0.103 Sum_probs=267.0
Q ss_pred HHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHH
Q 010268 19 VTMGFGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFL 98 (514)
Q Consensus 19 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~ 98 (514)
+....++++++.+...++.++........+++..|.+.+++|+|..+.|++.+.+.+++.+++++.|+++||+|||+++.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~ 105 (476)
T PLN00028 26 RLFSFARPHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSA 105 (476)
T ss_pred cccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 33445566666777777778888888888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHh--
Q 010268 99 ITAIVTSAAGLLSAFAPNYYLLLFFRCLVGLGLGGGPVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVM-- 176 (514)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~-- 176 (514)
.+.++++++.++.+++++++.+++.|++.|++.+.......++.|++|+++|++++++.....++|..+++.+.+.+.
T Consensus 106 ~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~ 185 (476)
T PLN00028 106 FLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPL 185 (476)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988766444567899999999999999998877777777766554432
Q ss_pred --c-----ccchHHHHHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhh
Q 010268 177 --P-----RLGWRWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNK 249 (514)
Q Consensus 177 --~-----~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (514)
+ ..|||+.|++.+++.++..+..++++++++ +++.++ ..+ +..
T Consensus 186 ~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p----~~~~~~-------~~~-~~~------------------ 235 (476)
T PLN00028 186 IKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLP----DGNYRE-------LKK-SGT------------------ 235 (476)
T ss_pred HHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCC----CCchhh-------HHh-cCc------------------
Confidence 2 258999999999888777666555543321 000000 000 000
Q ss_pred hcccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHH
Q 010268 250 SLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLV 329 (514)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (514)
. + +......++..++. +.++..++.++......+...
T Consensus 236 -------------------~-----------~----------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 272 (476)
T PLN00028 236 -------------------M-----------P----------KDSFSKVLRYGVTN---YRTWILALTYGYSFGVELTMD 272 (476)
T ss_pred -------------------c-----------c----------cccHHHHHHHHHcC---chhHHHHHHHHHHHHHHHHHH
Confidence 0 0 00000123333332 223333333333344444455
Q ss_pred HHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhH-------HHHHHHHHHHHHHhhhhh
Q 010268 330 LLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRK-------LSMSSMFFCCCIFLVPLL 402 (514)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~-------~~~~~~~~~~~~~~~~~~ 402 (514)
.+.|.+..+. .+.+...++....+..++.+++++++|+++||++|| .....+.++.++..+.+.
T Consensus 273 ~~~p~~l~~~---------~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~ 343 (476)
T PLN00028 273 NIIAEYFYDR---------FGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLG 343 (476)
T ss_pred hHHHHHHHHh---------cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhc
Confidence 5666665322 237777778888889999999999999999999865 222333333333333333
Q ss_pred cccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHH
Q 010268 403 FQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELV 482 (514)
Q Consensus 403 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~ 482 (514)
...+.+......++.+++.+...+..+++..+..| +.+|++.|+.+..+.+|+.++|.+.+ ..+..++...+.+.+++
T Consensus 344 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~ 421 (476)
T PLN00028 344 RANSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVM 421 (476)
T ss_pred ccchHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHH
Confidence 33343434444455555555555566667777655 78999999998877777777777654 12233466777777777
Q ss_pred HHHHHHHhhcc
Q 010268 483 ILLSGISVLLF 493 (514)
Q Consensus 483 ~~~~~~~~~~~ 493 (514)
.++++++.++.
T Consensus 422 ~~i~~~~~~~~ 432 (476)
T PLN00028 422 IIACTLPVAFI 432 (476)
T ss_pred HHHHHHHHHhe
Confidence 77766665544
No 33
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=1.1e-33 Score=275.68 Aligned_cols=362 Identities=15% Similarity=0.085 Sum_probs=262.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHH
Q 010268 31 LAYAGMGWISEAMEMMLLSFVGPA-VQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGL 109 (514)
Q Consensus 31 ~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~ 109 (514)
+..+.++.+..........+.+|. +.+++|.|..++|++.+++.+++.++++++|+++||+|||+.++++.++..++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~ 96 (392)
T PRK12382 17 LFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGL 96 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHH
Confidence 334444556666667777778886 5689999999999999999999999999999999999999999998887766544
Q ss_pred HH---hh-----hhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 010268 110 LS---AF-----APNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLG 180 (514)
Q Consensus 110 ~~---~~-----~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~g 180 (514)
.. .+ .++++.+++.|+++|++.+.. +...+++.|++|+++|++++++.+.+..+|.+++|++++.+.+.+|
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g 176 (392)
T PRK12382 97 AYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFG 176 (392)
T ss_pred HHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 32 21 357889999999999999887 6666888999999999999999999999999999999999988899
Q ss_pred hHHHHHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCC
Q 010268 181 WRWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDD 260 (514)
Q Consensus 181 w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (514)
||..+.+..+..++........||.++. +++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------------------------------------- 209 (392)
T PRK12382 177 FAALALTTMVLPLLAWAFNGTVRKVPAH---AGERP-------------------------------------------- 209 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCC---cccCc--------------------------------------------
Confidence 9987776554443333222222221100 00000
Q ss_pred CCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc
Q 010268 261 TTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQN 340 (514)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (514)
+.++..+ ..++.... .+.....+.....+.+.+..+.+
T Consensus 210 -------------------------------------~~~~~~~-~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~ 247 (392)
T PRK12382 210 -------------------------------------SLWSVVG-LIWKPGLG----LALQGVGFAVIGTFVSLYFASKG 247 (392)
T ss_pred -------------------------------------hHHHHHH-HHHHhHHH----HHHHHHHHhHHHHHHHHHHHhcC
Confidence 0000110 00111111 11112222333344444443222
Q ss_pred ccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhh
Q 010268 341 KCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARIC 420 (514)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 420 (514)
.+ ..+.......++.++++++.|++.||+|+|+.+..+..+.++..+.+...++.+...+..++.+++
T Consensus 248 ----------~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 315 (392)
T PRK12382 248 ----------WA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAG 315 (392)
T ss_pred ----------Cc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 22 234455566777889999999999999999988888887777776666655555556666777777
Q ss_pred hcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcc
Q 010268 421 ITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLF 493 (514)
Q Consensus 421 ~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 493 (514)
.+...+...+...|..|+++|++++|+.+....+|..++|.+.|.+.|+.|+...+.+.+++.+++.++.++.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 316 CSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 7777787778888999999999999999999999999999999999999999888888888777777666544
No 34
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=6.7e-33 Score=265.65 Aligned_cols=376 Identities=14% Similarity=0.087 Sum_probs=275.3
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHH
Q 010268 22 GFGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQS-LWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLIT 100 (514)
Q Consensus 22 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~ 100 (514)
+-++-.++.+.+..++++..+..+..++++.+.+.+ ++|+|.+|.+++.++..+++.++.++.|++.||+|.|+++.++
T Consensus 27 ~~~~~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~ 106 (462)
T PRK15034 27 KGKHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFS 106 (462)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHH
Confidence 334456678888889999999999999999999876 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhh-----hhHHHHHHHHHHHhhhccchhhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010268 101 AIVTSAAGLLSAFA-----PNYYLLLFFRCLVGLGLGGGPVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLV 175 (514)
Q Consensus 101 ~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l 175 (514)
.++.++..++.+++ ++++.+++.|++.|++.+..++....+.+|+|+++||+++|+.....++|..+++++...+
T Consensus 107 ~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gigg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~ 186 (462)
T PRK15034 107 TAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLV 186 (462)
T ss_pred HHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 99999999999987 8999999999999998444477778999999999999999999877777777665555442
Q ss_pred h-----c-------------ccchHHHHHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCC
Q 010268 176 M-----P-------------RLGWRWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGN 237 (514)
Q Consensus 176 ~-----~-------------~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (514)
. . ..+||.++++.+++.++..++.++..++++. .+.+ .
T Consensus 187 i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~--~~~~---~------------------- 242 (462)
T PRK15034 187 IFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS--SRAS---I------------------- 242 (462)
T ss_pred HHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc--cccC---H-------------------
Confidence 2 2 2347888878777776665554443332210 0000 0
Q ss_pred CCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHH
Q 010268 238 LVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLV 317 (514)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 317 (514)
+.....+|+ +..|.+++.
T Consensus 243 -----------------------------------------------------------~~~~~vlk~---~~~Wllsll 260 (462)
T PRK15034 243 -----------------------------------------------------------ADQLPVLQR---LHLWLLSLL 260 (462)
T ss_pred -----------------------------------------------------------HHHHHHhCC---CchhHHHHH
Confidence 012223333 345666666
Q ss_pred HHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 010268 318 FFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIF 397 (514)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~ 397 (514)
+++....+.++..+.|.+.++. ++.........+..+...+.++++|+++||+|+++++..+.+..++.
T Consensus 261 y~~tFG~fvg~s~~lp~~~~~~-----------~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~ 329 (462)
T PRK15034 261 YLATFGSFIGFSAGFAMLAKTQ-----------FPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIF 329 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-----------cChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHH
Confidence 6777777777787888876432 32222222344556788899999999999999999998888766665
Q ss_pred hhhh-hccc-----CcchhHHHHHHHHhhhcccccceeeccccccCc---------------------chhhHHHHHHHH
Q 010268 398 LVPL-LFQQ-----PKGLTTGLLFGARICITVTFTVVYVYAPEIYPT---------------------SVRTTGVGVASS 450 (514)
Q Consensus 398 ~~~~-~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~---------------------~~~~~~~g~~~~ 450 (514)
.... ...+ +.+......+...++.+..+...+-++.+++|+ ++.|.+.|+...
T Consensus 330 ~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a 409 (462)
T PRK15034 330 SALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISA 409 (462)
T ss_pred HHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHH
Confidence 4332 2221 223333333444455566666666677777763 267899999999
Q ss_pred HHHHhHhHHHHHHHHHHhhcCch-hHHHHHHHHHHHHHHHhhccc
Q 010268 451 IGRIGGMVCPLVAVALVHGCHQT-AALILFELVILLSGISVLLFP 494 (514)
Q Consensus 451 ~~~~g~~~~p~i~g~l~~~~g~~-~~~~~~~~~~~~~~~~~~~~~ 494 (514)
.+.+|+++.|.+.|...+..|.+ ..++.+.+..+++.++.+...
T Consensus 410 ~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y 454 (462)
T PRK15034 410 IGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVY 454 (462)
T ss_pred HHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999887755 456677777777777776654
No 35
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=1.6e-33 Score=280.45 Aligned_cols=395 Identities=16% Similarity=0.167 Sum_probs=283.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----------------------hcCCCcchhHHHHHHHHHHHHHh
Q 010268 23 FGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQS----------------------LWHLSPNQESLITSVVFAGMLVG 80 (514)
Q Consensus 23 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----------------------~~~~s~~~~g~i~s~~~~~~~i~ 80 (514)
..+.||.+..++++++...+.++..++...+.+.+ +++++..+.|++.+.+.+++.++
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIII 92 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHH
Confidence 46778888899999999999999999999888876 78999999999999999999999
Q ss_pred hhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHH
Q 010268 81 AYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFA--PNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIF 157 (514)
Q Consensus 81 ~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~ 157 (514)
+++.|+++||+|||+++.++.++++++.++..++ .+++.+++.|+++|++.+.. +....++.|++|+++|++++++.
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 172 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMS 172 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHH
Confidence 9999999999999999999999999888887554 55788999999999999998 77779999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcc-cchHHHHHHhHHHHHHHHHHHHH-ccCChhhhhccCCchHHHHHHHHHHHHhCCCCCC
Q 010268 158 QTFWTVGTILEAGIAWLVMPR-LGWRWLLGLSAFPSSLLLLLYSV-TPESPRYLCLKGRTAEARHVLEKIAKINGTKLPS 235 (514)
Q Consensus 158 ~~~~~~G~~~~~~i~~~l~~~-~gw~~~f~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (514)
..+..+|.+++|++++.+.+. .|||..|++.+++.++..++++. .+|+|+... ...++.++. ..+....
T Consensus 173 ~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~---i~~~~~~---- 243 (465)
T TIGR00894 173 TSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHP--CISKFEKKY---INSSLQG---- 243 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCC--CCCHHHHHH---HHhhccc----
Confidence 999999999999999999888 49999999999888777665444 455553210 001110000 0000000
Q ss_pred CCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHH
Q 010268 236 GNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLW 315 (514)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 315 (514)
+ +++++ ....+++++++ +.++..+
T Consensus 244 ----------------------~------------------~~~~~-------------~~~~~~~~~~~---~~~~~~~ 267 (465)
T TIGR00894 244 ----------------------Q------------------KGSTR-------------QSLPIKAIPKS---LPVWAIW 267 (465)
T ss_pred ----------------------c------------------cCCCC-------------CCCCHHHHhcC---HHHHHHH
Confidence 0 00000 00134555554 3445555
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHH--------H
Q 010268 316 LVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLS--------M 387 (514)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~--------~ 387 (514)
+..++....++....|.|.+..+. .+.+....++...+..++.+++.++.|++.||+++|+. +
T Consensus 268 ~~~~~~~~~~~~~~~~lp~~l~~~---------~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~ 338 (465)
T TIGR00894 268 FAIFGHFWLYTILPTYLPTFISWV---------LRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKI 338 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---------hCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHH
Confidence 666677777777788888887543 23677777888888899999999999999999865421 1
Q ss_pred HHHHHHH--HHHhhhhhc-ccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHH
Q 010268 388 SSMFFCC--CIFLVPLLF-QQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAV 464 (514)
Q Consensus 388 ~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g 464 (514)
..+.... ++..+.... ..+.+....+..+.+.+.+...+.......|..| +.+|.+.|+.+..+.+++.++|.+.|
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g 417 (465)
T TIGR00894 339 FNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAG 417 (465)
T ss_pred HHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 1111111 111111222 2233333334444444444455555566667776 48999999999999999999999999
Q ss_pred HHHhhc--C-chhHHHHHHHHHHHHHHHhhc
Q 010268 465 ALVHGC--H-QTAALILFELVILLSGISVLL 492 (514)
Q Consensus 465 ~l~~~~--g-~~~~~~~~~~~~~~~~~~~~~ 492 (514)
.+.+.. + +...+.+.+++.+++.++..+
T Consensus 418 ~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 418 NILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred eeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 988753 2 455666666666666555443
No 36
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-33 Score=254.57 Aligned_cols=382 Identities=19% Similarity=0.195 Sum_probs=311.8
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHH
Q 010268 22 GFGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITA 101 (514)
Q Consensus 22 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~ 101 (514)
..++.+++.+.+..+.....++.+++++++.+.+.+++|+|+.|.+++.++..+...+..++.|.+.||+|.|++..++.
T Consensus 7 ~~k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~ 86 (417)
T COG2223 7 RGKRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSM 86 (417)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHH
Confidence 34566777888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhh---HHHHHHHHHHHhhhccchhhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 010268 102 IVTSAAGLLSAFAPN---YYLLLFFRCLVGLGLGGGPVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPR 178 (514)
Q Consensus 102 ~~~~~~~~~~~~~~~---~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~ 178 (514)
++..+..+..+++.+ ++++++++++.|++.+.+.+..+++++++|++++|.++|++. ..++|..+...++..++..
T Consensus 87 ~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~ 165 (417)
T COG2223 87 LLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVA 165 (417)
T ss_pred HHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHH
Confidence 999999999988854 559999999999998888888899999999999999999999 8999999999999998888
Q ss_pred cc---hHHHHHHhHHHHHHHHHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccC
Q 010268 179 LG---WRWLLGLSAFPSSLLLLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSS 254 (514)
Q Consensus 179 ~g---w~~~f~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
.+ |+....+..+..++..+. ++.+.|.|......++...
T Consensus 166 ~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~------------------------------------- 208 (417)
T COG2223 166 FGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP------------------------------------- 208 (417)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch-------------------------------------
Confidence 88 999998888888776555 5666666542111110000
Q ss_pred CCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010268 255 SSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTE 334 (514)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (514)
..++.++++ +..|.+++.++.....+.++..++|.
T Consensus 209 ------------------------------------------~~~~~v~~~---~~~W~lsllY~~tFG~Fvgfs~~l~~ 243 (417)
T COG2223 209 ------------------------------------------AQLKAVFSN---KDTWLLSLLYFATFGGFVGFSAYLPM 243 (417)
T ss_pred ------------------------------------------hHHHHHhcC---cchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 023333333 45667777777777777788888888
Q ss_pred hhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhccc-------Cc
Q 010268 335 LNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQ-------PK 407 (514)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-------~~ 407 (514)
+.++. .+.++..++.......+.+.+.+.++|+++||+|.++++...+..++++........ +.
T Consensus 244 ~~~~~---------fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~ 314 (417)
T COG2223 244 YLVTQ---------FGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSF 314 (417)
T ss_pred HHHHh---------cCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcch
Confidence 87653 347777888888899999999999999999999999998888888887776666442 33
Q ss_pred chhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcC-chhHHHHHHHHHHHH
Q 010268 408 GLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCH-QTAALILFELVILLS 486 (514)
Q Consensus 408 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g-~~~~~~~~~~~~~~~ 486 (514)
.......+..+++.+......+.++..++| ++.|.+.|+...++.+|++.-|...|...+..| +...++++....+++
T Consensus 315 ~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a 393 (417)
T COG2223 315 VVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVA 393 (417)
T ss_pred HHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 444555666677778888888889999887 578999999999999999999999999999998 555677777777777
Q ss_pred HHHhhccccc
Q 010268 487 GISVLLFPFE 496 (514)
Q Consensus 487 ~~~~~~~~~~ 496 (514)
.+..+....+
T Consensus 394 ~v~~~~~y~r 403 (417)
T COG2223 394 LVLTWALYAR 403 (417)
T ss_pred HHHHHHHHHh
Confidence 7766655433
No 37
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=4.3e-33 Score=278.33 Aligned_cols=398 Identities=13% Similarity=0.077 Sum_probs=283.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHH
Q 010268 27 QLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSA 106 (514)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~ 106 (514)
+|..+..++++.+....+....+..+|.+.+++|.+..+.+|+.+.+.++..++.+++|+++||+|||++++++.++..+
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~ 83 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGL 83 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 56788888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHH
Q 010268 107 AGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFI-PAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWL 184 (514)
Q Consensus 107 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~ 184 (514)
+.+++++++|++.++++|+++|++.+.. +.....+.+++ |+++|++++|++.....+|..+||.+++++.+++|||+.
T Consensus 84 ~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~ 163 (495)
T PRK14995 84 ASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSV 163 (495)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHH
Confidence 9999999999999999999999999887 66666676765 678999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHH-HHHccCChhhhhccCCchHHHHHHHH------HHHHhCCCCCCCCCCCchhhhhhhhhcccCCCC
Q 010268 185 LGLSAFPSSLLLLL-YSVTPESPRYLCLKGRTAEARHVLEK------IAKINGTKLPSGNLVSDWEHELQNKSLLSSSSN 257 (514)
Q Consensus 185 f~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
|++...+.++.+++ .+++|+++... +++.+........ .......... . .........-.
T Consensus 164 f~i~~~~~~~~~~l~~~~l~~~~~~~--~~~~d~~g~~~~~~~~~~l~~~~~~~~~~--~-~~~~~~~~~~~-------- 230 (495)
T PRK14995 164 FLINVPIVLVVMGLTARYVPRQAGRR--DQPLNLGHALMLIVAILLLVYSAKTALKG--F-LSLWVTSLTLL-------- 230 (495)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCC--CCCCChHhHHHHHHHHHHHHHHHHhcccc--C-CchHHHHHHHH--------
Confidence 99988777666444 55677764321 1111111110000 0000000000 0 00000000000
Q ss_pred CCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 010268 258 EDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNN 337 (514)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (514)
.....- ..-...+.+. +....++ .+++++ .+.......+.....+++...+.|.+.+
T Consensus 231 ------~~~~~l--~~f~~~e~~~-----------~~p~~~~-~lf~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~lq 287 (495)
T PRK14995 231 ------TGALLL--GLFIRTQLAA-----------SRPMIDM-RLFTHR---IILSGVVMAMTAMITLVGFELLMAQELQ 287 (495)
T ss_pred ------HHHHHH--HHHHHHHhcC-----------CCCCcCH-HHhCCc---ccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 0000000000 0000112 233332 2223333334444445555666676654
Q ss_pred CccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhc---ccCcchhHHHH
Q 010268 338 GQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLF---QQPKGLTTGLL 414 (514)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 414 (514)
.. .+.++..++.......++..++.++.|++.||+|+|+.+..+.++.+++.+.+.. ..+.+......
T Consensus 288 ~v---------~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 358 (495)
T PRK14995 288 FV---------HGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLM 358 (495)
T ss_pred HH---------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHH
Confidence 32 2377888888888899999999999999999999999888888777666554432 22344455567
Q ss_pred HHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhh
Q 010268 415 FGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHG 469 (514)
Q Consensus 415 ~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~ 469 (514)
++.|++.+...+.......+.+|+++++.+.++.+....+|+.+|+.+.|.+.+.
T Consensus 359 ~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 359 ALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888888888888888888999999999999999999999999999999998763
No 38
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=1.1e-32 Score=269.89 Aligned_cols=376 Identities=14% Similarity=-0.015 Sum_probs=272.2
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHH
Q 010268 24 GKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIV 103 (514)
Q Consensus 24 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~ 103 (514)
++..+...+.+.+..+...+....+.+..|.+.+++|.|..+.++..+.+.+++.+++++.|+++||+|||++++++..+
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 87 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAF 87 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 34556666677777778888888888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 010268 104 TSAAGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWR 182 (514)
Q Consensus 104 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~ 182 (514)
.+++.++..++++++.+++.|++.|++.+.. +...+++.|++++++|.+++++......+|..++|.+++.+.+..+||
T Consensus 88 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~ 167 (406)
T PRK15402 88 FILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWR 167 (406)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcc
Confidence 9999999999999999999999999998887 667788899999999999999999888999999999999998889999
Q ss_pred HHHHHhHHHHHHHHHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCC
Q 010268 183 WLLGLSAFPSSLLLLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDT 261 (514)
Q Consensus 183 ~~f~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (514)
+.|++.++..++..+. .+..||+++.. +++.+.+ +
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----~------------------------------------- 203 (406)
T PRK15402 168 GMFVLFAALAALSFFGLWRAMPETAGRV---GEKLSLK----E------------------------------------- 203 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCccc---cccccHH----H-------------------------------------
Confidence 9999988877766554 34456553210 0000000 0
Q ss_pred CccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Q 010268 262 TPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNK 341 (514)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (514)
....++.+++++..+ ......+......+....+.|.+..+.
T Consensus 204 ---------------------------------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~-- 245 (406)
T PRK15402 204 ---------------------------------LGRDYKLVLKNRRFV---AGALALGLVSLPLLAWIALSPVILISG-- 245 (406)
T ss_pred ---------------------------------HHHHHHHHHcCcHHH---HHHHHHHHHHHHHHHHHHHhHHHHHHH--
Confidence 001333444443222 222222222232333334445443221
Q ss_pred cccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhc-----ccCcchhHHHHHH
Q 010268 342 CVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLF-----QQPKGLTTGLLFG 416 (514)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 416 (514)
.+.++...+.......++.++++++.+++.||+++|+.+..+.++.+++.+.+.. ..+.+.......+
T Consensus 246 -------~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 318 (406)
T PRK15402 246 -------EQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSL 318 (406)
T ss_pred -------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHH
Confidence 1255555555555566778899999999999999999888877766655554432 1233344455666
Q ss_pred HHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q 010268 417 ARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGIS 489 (514)
Q Consensus 417 ~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 489 (514)
.+++.+...+......... +++++|++.++.+....++..+|+.+.+.+.+..+.....+...+..++..++
T Consensus 319 ~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 390 (406)
T PRK15402 319 YAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLL 390 (406)
T ss_pred HHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHH
Confidence 7777776666555544333 44889999999999999999999999999998877665444444444444333
No 39
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=1.3e-33 Score=278.79 Aligned_cols=397 Identities=10% Similarity=0.049 Sum_probs=281.8
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHH
Q 010268 22 GFGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITA 101 (514)
Q Consensus 22 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~ 101 (514)
+.+.++|.++..+++...........++...|.+.+++|.|..+.+++.+.+.++..++.++.|+++||+|||++++.+.
T Consensus 12 ~~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~ 91 (455)
T TIGR00892 12 PDGGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGG 91 (455)
T ss_pred CCCCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhH
Confidence 34667888888888877766666677888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHHH-HHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 010268 102 IVTSAAGLLSAFAPNYYLLLF-FRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRL 179 (514)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~ 179 (514)
++.+++.++++++++++.+++ .|++.|++.+.. +....++.++++ ++|++++++.+.+..+|..++|++++.+.+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~ 170 (455)
T TIGR00892 92 LLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESF 170 (455)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh
Confidence 999999999999999988865 579999999876 666677788885 78999999999999999999999999999989
Q ss_pred chHHHHHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCC
Q 010268 180 GWRWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNED 259 (514)
Q Consensus 180 gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (514)
|||+.|++.+++.++..+..+++.+.+... +...++.. +. .+.
T Consensus 171 gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~-----------~~------------------------~~~ 213 (455)
T TIGR00892 171 GWRGSFLILGGLLLHCCVCGALMRPVGPSQ--RVSKSKSK-----------EG------------------------LPP 213 (455)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCccc--cccccccc-----------cc------------------------CCC
Confidence 999999999888776655544443221100 00000000 00 000
Q ss_pred CCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 010268 260 DTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQ 339 (514)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (514)
+...+ +.+. .. ..+ .......++ +++++ .++......+.....++....+.+.+.++.
T Consensus 214 ~~~~~---~~~~--~~--~~~-----------~~~~~~~~~-~~~~~---~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ 271 (455)
T TIGR00892 214 DGSTK---KLSK--KS--TAE-----------KINRFLDFS-LFTHR---GFLVYLSGNVIMFLGFFAPIIFLVPYAKDK 271 (455)
T ss_pred CCccc---cccc--cc--hhh-----------hhhhhcchH-HhcCc---hHHHHHHHHHHHHHHccchHHHHHHHHHHc
Confidence 00000 0000 00 000 000000122 33332 223333333444445555556666665443
Q ss_pred cccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHH--hhHHHH--HHHHHHHHHHhhhhhcccCcchhHHHHH
Q 010268 340 NKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRL--GRKLSM--SSMFFCCCIFLVPLLFQQPKGLTTGLLF 415 (514)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~--g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (514)
+ .+...++...++.+++.++++++.+++.||. ++++.. ..+.++.++..+......+.+...+..+
T Consensus 272 g----------~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~ 341 (455)
T TIGR00892 272 G----------VDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCI 341 (455)
T ss_pred C----------CCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHH
Confidence 3 7777778888888999999999999999973 333322 2333333344444444556666667778
Q ss_pred HHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcC-chhHHHHHHHHHHHHHH
Q 010268 416 GARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCH-QTAALILFELVILLSGI 488 (514)
Q Consensus 416 ~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g-~~~~~~~~~~~~~~~~~ 488 (514)
+.|++.+...+...+++.|.+|++++++++|+.+....+|.+++|.+.|.+.|..+ +...+.+.+++.+++++
T Consensus 342 ~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 342 FFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 88888888888888999999999999999999999999999999999999999875 65666666666555544
No 40
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=4.3e-33 Score=269.30 Aligned_cols=353 Identities=14% Similarity=0.092 Sum_probs=269.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhh
Q 010268 35 GMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFA 114 (514)
Q Consensus 35 ~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~ 114 (514)
.++.+...+......+.+|.+..+++.+..++|++.+++.++..++++++|+++||+|||++++.+.++..++.++..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 84 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFV 84 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 34556667777778888899999999999999999999999999999999999999999999999999998888888888
Q ss_pred h-----hHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHh
Q 010268 115 P-----NYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLS 188 (514)
Q Consensus 115 ~-----~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~ 188 (514)
+ +++.+++.|++.|++.+.. +...+++.|++|+++|++++++.+.+..+|.+++|.+++.+.+..|||+.|++.
T Consensus 85 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~ 164 (365)
T TIGR00900 85 ALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVD 164 (365)
T ss_pred HHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 7 9999999999999999988 777799999999999999999999999999999999999999989999999988
Q ss_pred HHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCcccccc
Q 010268 189 AFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMAR 268 (514)
Q Consensus 189 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (514)
++..++..+..+.+++++.. .+++++..++..++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-------------------------------------------- 198 (365)
T TIGR00900 165 AVGFAISALLIVSVRIPELA--ASEIQALSNAVLRD-------------------------------------------- 198 (365)
T ss_pred HHHHHHHHHHHHhcccccCC--CccccccchhHHHH--------------------------------------------
Confidence 77766665544443221100 00000000000000
Q ss_pred CCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhcCccccccccc
Q 010268 269 DEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLV-LLTTELNNGQNKCVSNEL 347 (514)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 347 (514)
....++.+++++..+.... ..+.....+.... .+.|.+..+.
T Consensus 199 --------------------------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-------- 241 (365)
T TIGR00900 199 --------------------------TREGIKFVLKNPLLRTLLL---LALLFNLVFAPAIVALFPYVQSKY-------- 241 (365)
T ss_pred --------------------------HHhHHHHHHcCcHHHHHHH---HHHHHHHHHHHHHHHHhHHHHHHH--------
Confidence 0013444454443332222 2222222232232 4555554321
Q ss_pred cCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccC-cchhHHHHHHHHhhhccccc
Q 010268 348 QSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQP-KGLTTGLLFGARICITVTFT 426 (514)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~ 426 (514)
.+.+....+.......++.+++.++.+++.||++||+.+..+..+.++....+.+..+ .+...+..++.|++.+...+
T Consensus 242 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 320 (365)
T TIGR00900 242 -LGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINV 320 (365)
T ss_pred -hCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 1256666677888888999999999999999999999888877777776666655553 55566677888888888888
Q ss_pred ceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcC
Q 010268 427 VVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCH 471 (514)
Q Consensus 427 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g 471 (514)
...++..|.+|++.|+++.|+.+....++..++|.+.|.+.|..|
T Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 321 PQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 899999999999999999999999999999999999999998754
No 41
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=2.7e-32 Score=267.72 Aligned_cols=372 Identities=17% Similarity=0.150 Sum_probs=274.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcch-----hHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHH
Q 010268 33 YAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQ-----ESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAA 107 (514)
Q Consensus 33 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-----~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~ 107 (514)
..+++.++.........+++|.+.+++|.+..+ .|++.+++.++..++++++|+++||+|||+.++.+.++.+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 97 (408)
T PRK09874 18 VAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIV 97 (408)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHH
Confidence 344566677777778888999999999998765 489999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhHHHHHHHHHHHhhhccchhhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Q 010268 108 GLLSAFAPNYYLLLFFRCLVGLGLGGGPVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGL 187 (514)
Q Consensus 108 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~ 187 (514)
.+++.+.++++.+++.|++.|++.+..+....++.+++++++|++++++...+..+|.+++|.+++.+.+..+||..|++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~ 177 (408)
T PRK09874 98 MVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFI 177 (408)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 99988999999999999999998665566667888999999999999999999999999999999999988999999999
Q ss_pred hHHHHHHHHHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCcccc
Q 010268 188 SAFPSSLLLLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEM 266 (514)
Q Consensus 188 ~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (514)
.+++.++..+. .++++|+++.. ++++ ....++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~------------------------------------------ 210 (408)
T PRK09874 178 TASVLFLCFLVTLFCIRENFQPV----SKKE-MLHMRE------------------------------------------ 210 (408)
T ss_pred HHHHHHHHHHHHHHHhccCcccc----cchh-hhHHHH------------------------------------------
Confidence 88877766554 44455542110 0000 000000
Q ss_pred ccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccc
Q 010268 267 ARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNE 346 (514)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (514)
.++.+.+++.++......+ ...........+.+.+..+..
T Consensus 211 -------------------------------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~------ 250 (408)
T PRK09874 211 -------------------------------VVTSLKNPKLVLSLFVTTL---IIQVATGSIAPILTLYVRELA------ 250 (408)
T ss_pred -------------------------------HHHhCcCCchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHh------
Confidence 1111222222222221111 111111222223333332111
Q ss_pred ccCCCccc---CcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcc
Q 010268 347 LQSGKSRD---INYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITV 423 (514)
Q Consensus 347 ~~~~~~~~---~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 423 (514)
+...+ ..+....+.+++.+++.+..|++.||++||+.+..+..+.++..+.....++.+...+..++.|++.+.
T Consensus 251 ---~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 327 (408)
T PRK09874 251 ---GNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGA 327 (408)
T ss_pred ---ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHh
Confidence 01111 123344556677888889999999999999998888877777666665555666666667778888888
Q ss_pred cccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhccc
Q 010268 424 TFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFP 494 (514)
Q Consensus 424 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 494 (514)
..+...+...+..|++.+|+.+|+.+.+..+|..++|.+.|.+.+..|+...+.+.+++.+++.++.+...
T Consensus 328 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 328 LLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred hHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888899999999999999999999999999999999999998888888888777776665443
No 42
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=1.7e-32 Score=265.79 Aligned_cols=366 Identities=14% Similarity=0.082 Sum_probs=260.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHH
Q 010268 32 AYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLS 111 (514)
Q Consensus 32 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~ 111 (514)
....+..+..........+.+|.+.+++|.|.++.|++.+.+.+++.++++++|+++||+|||+++.++..+.+++.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~ 85 (382)
T PRK10091 6 LSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMF 85 (382)
T ss_pred HHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHH
Confidence 34445566777777788889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHH
Q 010268 112 AFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAF 190 (514)
Q Consensus 112 ~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~ 190 (514)
+++++++.+++.|++.|++.+.. +....++.+++++++|++++++...+..+|..++|++++.+.+..|||+.|++.++
T Consensus 86 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~ 165 (382)
T PRK10091 86 TLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAV 165 (382)
T ss_pred HHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHH
Confidence 99999999999999999999887 66667888999999999999999999999999999999999988999999999888
Q ss_pred HHHHHHHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccC
Q 010268 191 PSSLLLLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARD 269 (514)
Q Consensus 191 ~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (514)
+.++..+. ++++||.++ +.+. +.++
T Consensus 166 ~~~~~~~~~~~~lp~~~~----~~~~-~~~~------------------------------------------------- 191 (382)
T PRK10091 166 FNIAVLASIYFWVPDIRD----EAKG-GLRE------------------------------------------------- 191 (382)
T ss_pred HHHHHHHHHHHhCCCCCc----cccc-CHHH-------------------------------------------------
Confidence 77666443 455666431 0000 0000
Q ss_pred CCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccC
Q 010268 270 EDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQS 349 (514)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (514)
.++.+++++.+ ......+......+....+.+.+..+. .
T Consensus 192 ----------------------------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 230 (382)
T PRK10091 192 ----------------------------QFHFLRSPAPW----LIFAATMFGNAGVFAWFSYIKPYMMFI---------S 230 (382)
T ss_pred ----------------------------HHHHhcChHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHh---------c
Confidence 11112222211 111111222222222222223232211 2
Q ss_pred CCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhc-ccCcchhHHHHHHHHhhhcccccce
Q 010268 350 GKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLF-QQPKGLTTGLLFGARICITVTFTVV 428 (514)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~ 428 (514)
+.++...+.......++.++++++.+++.||+++|+.+..+..+.++..+.+.. .++.+...+..++.+.+..+..+..
T Consensus 231 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 310 (382)
T PRK10091 231 GFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPL 310 (382)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHH
Confidence 367777788888999999999999999999999999888887777766654433 3333333444444444444333332
Q ss_pred e-eccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhh-cCchhHHHHHHHHHHHHHHHhhccc
Q 010268 429 Y-VYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHG-CHQTAALILFELVILLSGISVLLFP 494 (514)
Q Consensus 429 ~-~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 494 (514)
. ....+..|++.++.+. .+....+|..+||.+.|.+.|. .++...+...++++++.........
T Consensus 311 ~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (382)
T PRK10091 311 QILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYG 376 (382)
T ss_pred HHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHh
Confidence 2 3344444555555543 4667789999999999999996 4566666666655555554444443
No 43
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=4.1e-32 Score=263.13 Aligned_cols=360 Identities=16% Similarity=0.132 Sum_probs=260.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHH
Q 010268 31 LAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLL 110 (514)
Q Consensus 31 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~ 110 (514)
+..+.++.++.........+.+|.+.+++|.|..++|++.+.+.+++.+++++.|+++||+|||+.+..+.++.+++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~ 87 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAG 87 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555677778888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhH
Q 010268 111 SAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSA 189 (514)
Q Consensus 111 ~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~ 189 (514)
.+++++++.+++.|++.|++.+.. +...+.+.+..++++|+++++++..+.++|..+||.+++.+.+...|...+.. +
T Consensus 88 ~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~-~ 166 (381)
T PRK03633 88 LGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVT-G 166 (381)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHH-H
Confidence 999999999999999999999887 66667778888999999999999999999999999999988765434333332 2
Q ss_pred HHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccC
Q 010268 190 FPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARD 269 (514)
Q Consensus 190 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (514)
......+ ..++.+.+++ +.++++
T Consensus 167 ~~~~~~~-~~~~~~~~~~----~~~~~~---------------------------------------------------- 189 (381)
T PRK03633 167 LVLAAIL-PLLFTRILNQ----QAENHD---------------------------------------------------- 189 (381)
T ss_pred HHHHHHH-HHHHhcccCC----CCCCCC----------------------------------------------------
Confidence 2211111 1111111110 000000
Q ss_pred CCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccC
Q 010268 270 EDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQS 349 (514)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (514)
. .+.+..++++..+.... ..+.....+.....+.|.+.++.+
T Consensus 190 -------------~-------------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~lp~~~~~~g--------- 231 (381)
T PRK03633 190 -------------S-------------TSIWPMLKLRQARLGVN---GCIISGIVLGSLYGLMPLYLNHQG--------- 231 (381)
T ss_pred -------------C-------------CCHHHHHHhcchHHHHH---HHHHHHHHHHHHHHHHHHHHHHcC---------
Confidence 0 01111222222221111 111222222333345666664433
Q ss_pred CCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhccccccee
Q 010268 350 GKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVY 429 (514)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 429 (514)
.+....+.......++.+++++..|++.||+++|+.+..+....+++.+.+. . .........+.+++.....|...
T Consensus 232 -~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~~~~~~p~~~ 307 (381)
T PRK03633 232 -MSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGAAGFTLYPVAM 307 (381)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHHHHhHHHHHH
Confidence 6666667777888899999999999999999999988877777666554443 1 12223344555555556678888
Q ss_pred eccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHh
Q 010268 430 VYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISV 490 (514)
Q Consensus 430 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 490 (514)
+...|..|+++++...+..+...++|..++|.+.|.+.|+.++...+.+.+++.++..+..
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~ 368 (381)
T PRK03633 308 AWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLML 368 (381)
T ss_pred HHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHH
Confidence 8888999888888888888888899999999999999999998888887777766554433
No 44
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=5.9e-33 Score=273.76 Aligned_cols=403 Identities=15% Similarity=0.135 Sum_probs=272.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHH
Q 010268 25 KFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVT 104 (514)
Q Consensus 25 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~ 104 (514)
+.++..+....+.+...+..+..+....|.+.+ +|.|+.+.|++.+++.++..+++++.|+++||+|||+.++++.++.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~ 101 (438)
T TIGR00712 23 RLRWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILS 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHH
Confidence 345666677777778888888778888888776 5999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh----hhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHh-cc
Q 010268 105 SAAGLLSAFA----PNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVM-PR 178 (514)
Q Consensus 105 ~~~~~~~~~~----~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~-~~ 178 (514)
+++.++..+. ++++.+.+.|++.|++.+.. +.....+.|++|+++|++++++.+.+.++|..+++.+.+... ..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 181 (438)
T TIGR00712 102 AAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF 181 (438)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh
Confidence 9888877664 46777888999999999887 667788899999999999999999999999999988776544 35
Q ss_pred cchHHHHHHhHHHHHHHH-HHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCC
Q 010268 179 LGWRWLLGLSAFPSSLLL-LLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSN 257 (514)
Q Consensus 179 ~gw~~~f~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
.+||..|++.++++++.. +.++++||+|+....+. .+ + .+ .+ .
T Consensus 182 ~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~--~-----~~---~~-------------------------~ 225 (438)
T TIGR00712 182 NDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPP-IE--E-----YR---ND-------------------------Y 225 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCC-ch--h-----cc---cc-------------------------c
Confidence 799999999888877764 44666777654210000 00 0 00 00 0
Q ss_pred CCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 010268 258 EDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNN 337 (514)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (514)
.+ +..++.++ +.+. +....+.+++++ .++...+..++.....++...+.|.+.+
T Consensus 226 ~~----~~~~~~~~---------~~~~----------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~l~ 279 (438)
T TIGR00712 226 PD----DYNEKAEQ---------ELTA----------KEIFMQYVLPNK---LLWYIAIANVFVYLLRYGVLDWSPTYLK 279 (438)
T ss_pred cc----cccccccc---------ccch----------HHHHHHHHccCc---hHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 00 00000000 0000 000112233332 2333333334444555667778888775
Q ss_pred CccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHH---HHHhhhhhcc--cCcchhHH
Q 010268 338 GQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCC---CIFLVPLLFQ--QPKGLTTG 412 (514)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~ 412 (514)
+. .+.++..+++...+..+.+++++++.|++.||+++++....+.... .+..+.+... .+.+....
T Consensus 280 ~~---------~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (438)
T TIGR00712 280 EV---------KHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMI 350 (438)
T ss_pred Hc---------cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHH
Confidence 42 1367777777788888999999999999999996432111222111 1122222221 12232223
Q ss_pred HHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhH-hHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhh
Q 010268 413 LLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGG-MVCPLVAVALVHGCHQTAALILFELVILLSGISVL 491 (514)
Q Consensus 413 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~-~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 491 (514)
..+..+++..+..........|.+|++.|+++.|+.+....+++ +++|.+.|.+.|+.|+...+.+..++.+++.+..+
T Consensus 351 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 430 (438)
T TIGR00712 351 CMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 430 (438)
T ss_pred HHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 33333333222222223456799999999999999999888775 68999999999999988888888887777777777
Q ss_pred cccccccC
Q 010268 492 LFPFETTG 499 (514)
Q Consensus 492 ~~~~~~~~ 499 (514)
+..+|.|+
T Consensus 431 ~~~~~~~~ 438 (438)
T TIGR00712 431 VVMIGEKR 438 (438)
T ss_pred HHHhhccC
Confidence 77766553
No 45
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=8.2e-32 Score=258.94 Aligned_cols=345 Identities=29% Similarity=0.405 Sum_probs=296.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhh
Q 010268 34 AGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAF 113 (514)
Q Consensus 34 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~ 113 (514)
+.+..+..........+..|.+.+++|.+..+.+++.+...++..+++++.|+++||+|||+.+..+..+..++.++..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~ 83 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAF 83 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHH
Confidence 44566777888888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHH
Q 010268 114 APNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPS 192 (514)
Q Consensus 114 ~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~ 192 (514)
.++++.+++.|++.|++.+.. +...+++.|++|+++|++++++.+...++|..++|.+++.+.+..+||..+++.++..
T Consensus 84 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (352)
T cd06174 84 ASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILG 163 (352)
T ss_pred hccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 999999999999999999988 7777999999999999999999999999999999999999999889999999988887
Q ss_pred HHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCc
Q 010268 193 SLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDS 272 (514)
Q Consensus 193 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (514)
++..+...+++
T Consensus 164 ~~~~~~~~~~~--------------------------------------------------------------------- 174 (352)
T cd06174 164 LLLALLLLFLL--------------------------------------------------------------------- 174 (352)
T ss_pred HHHHHHHHHHH---------------------------------------------------------------------
Confidence 77766654443
Q ss_pred hhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCc
Q 010268 273 ISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKS 352 (514)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (514)
+.++......+...........+.+.+..+.. +.+
T Consensus 175 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 209 (352)
T cd06174 175 ------------------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVL---------GLS 209 (352)
T ss_pred ------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---------CCC
Confidence 11222333344444445555556666654321 256
Q ss_pred ccCcccchhhhhhchhhHHHHHHHHHHHHhhHH-HHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeec
Q 010268 353 RDINYGDVFITSFAEFPGLLLAAAMVDRLGRKL-SMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVY 431 (514)
Q Consensus 353 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 431 (514)
....+.......++..++.++.+++.||++||+ .+..+..+..++.+.+...++.+...+..++.+++.+...+...++
T Consensus 210 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 289 (352)
T cd06174 210 AAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTL 289 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHH
Confidence 666788888999999999999999999999999 8888888888888887777777777788888999999999999999
Q ss_pred cccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhc
Q 010268 432 APEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLL 492 (514)
Q Consensus 432 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 492 (514)
..|..|+++|++.+|+.+....++..++|.+.|.+.+..++...+.+.+++.+++.++.++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 290 ASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 9999999999999999999999999999999999999889888888888888777766543
No 46
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=3.6e-31 Score=264.30 Aligned_cols=397 Identities=14% Similarity=0.131 Sum_probs=270.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHH
Q 010268 30 VLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGL 109 (514)
Q Consensus 30 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~ 109 (514)
.++.++++.+...++...+.+..|.+.+++|.|..+.|++.+.+.++..++.+++|+++||+|||++++.+..+.+++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~ 90 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSL 90 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 34556677788888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHh
Q 010268 110 LSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLS 188 (514)
Q Consensus 110 ~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~ 188 (514)
++.++++++.+++.|+++|++.+.. +...+++.|++|+++|+++.++.....++|..++|.+++.+.+..|||+.|++.
T Consensus 91 ~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~ 170 (471)
T PRK10504 91 FCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLIN 170 (471)
T ss_pred HHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHH
Confidence 9899999999999999999999987 777788999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHH-HHHccCChhhhhccCCchHHHHHHHHH---H---HHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCC
Q 010268 189 AFPSSLLLLL-YSVTPESPRYLCLKGRTAEARHVLEKI---A---KINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDT 261 (514)
Q Consensus 189 ~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (514)
.....+..+. ....|+.+.. +.+.+......... . ..++.+.. . .. ........
T Consensus 171 ~~~~~l~~~~~~~~~~~~~~~---~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~~~~----------- 231 (471)
T PRK10504 171 IPVGIIGAIATLMLMPNYTMQ---TRRFDLSGFLLLAVGMATLTLALDGSKGL--G--LS-PLAIAGLV----------- 231 (471)
T ss_pred HHHHHHHHHHHHHhCCCcccc---CCCCChHHHHHHHHHHHHHHHHHhcCCcC--C--cc-hHHHHHHH-----------
Confidence 7766665544 3344443311 11111111100000 0 00000000 0 00 00000000
Q ss_pred CccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Q 010268 262 TPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNK 341 (514)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (514)
............+++..++ ...+.+ +++++.+...+ ...++....+.....+.|++.+..
T Consensus 232 -~~~~~~~~~~~~~~~~~~~-------------~~~~~~-l~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~-- 291 (471)
T PRK10504 232 -AVGVVALLLYLLHARNNNR-------------ALFSLK-LFRTRTFSLGL---AGSFAGRIGSGMLPFMTPVFLQIG-- 291 (471)
T ss_pred -HHHHHHHHHHHHHHhcCCC-------------CccCHH-HhcccchHHHH---HHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 0000000000000000000 000222 34433332222 222233333333444556555321
Q ss_pred cccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhccc--C-cchhHHHHHHHH
Q 010268 342 CVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQ--P-KGLTTGLLFGAR 418 (514)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~g 418 (514)
.+.++...++......++.+++.++.+++.||+|+|+++..+..+.++..+.+.+.. + .+......++.|
T Consensus 292 -------~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 364 (471)
T PRK10504 292 -------LGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQG 364 (471)
T ss_pred -------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHH
Confidence 126666667777777888888889999999999999999888877776655544322 2 122233455566
Q ss_pred hhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCc
Q 010268 419 ICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQ 472 (514)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~ 472 (514)
++.+..++....+..+.+|++.+++++|+.+....+|..+||.+.|.+.+..|+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 365 MVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 777777778888888999999999999999999999999999999999887764
No 47
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=1.9e-31 Score=260.16 Aligned_cols=355 Identities=15% Similarity=0.108 Sum_probs=250.3
Q ss_pred HHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHh---h-hhhHHHHHHHH
Q 010268 49 SFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSA---F-APNYYLLLFFR 124 (514)
Q Consensus 49 ~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~---~-~~~~~~l~~~r 124 (514)
....|.+.+++|.|+.+.|++.+.+.++..+++++.|+++||+|||+++..+..+.+++.+++. + .++++.+++.|
T Consensus 33 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 112 (402)
T TIGR00897 33 QGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFY 112 (402)
T ss_pred HHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHH
Confidence 3345566688999999999999999999999999999999999999999999999888876542 3 25788889999
Q ss_pred HHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHH-HH
Q 010268 125 CLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGT-ILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLLY-SV 201 (514)
Q Consensus 125 ~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~-~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~-~~ 201 (514)
++.|++.+.. +...+++.+++|+++|++++|+.+.+.++|. +++|.+++.+.+..||+..++......++..++. ++
T Consensus 113 ~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 192 (402)
T TIGR00897 113 GIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFS 192 (402)
T ss_pred HHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhc
Confidence 9999988776 5566788899999999999999999999997 6899999998888897766555443333333332 33
Q ss_pred ccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhcc
Q 010268 202 TPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKS 281 (514)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (514)
.++.++.. .++++++ .+
T Consensus 193 ~~~~~~~~-~~~~~~~-------------------------------------------------------~~------- 209 (402)
T TIGR00897 193 NKDIFTPQ-HMQTREK-------------------------------------------------------FS------- 209 (402)
T ss_pred cCCCCCcc-cccCCcc-------------------------------------------------------hh-------
Confidence 33321100 0000000 00
Q ss_pred CCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchh
Q 010268 282 EDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVF 361 (514)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (514)
+..+.++.+++++ .++......++....+++...+.|.+.++.+ .+....+....
T Consensus 210 ------------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g----------~s~~~~~~~~~ 264 (402)
T TIGR00897 210 ------------ELGKAATILFTNP---NVLLGGMVRIINTIGLFGFAVFLPMFVAELG----------FSTSEWLQIWG 264 (402)
T ss_pred ------------hHHHHHHHHHcCh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC----------CChhHHHHHHH
Confidence 0001233444443 2333334445555666777778887775543 66666677777
Q ss_pred hhhhchhhHHHHHHHHHHHHhhHHHHH-HHHHHHHHHhhhhh-----cccCcchhHHHHHHHHhhhcccccceeeccccc
Q 010268 362 ITSFAEFPGLLLAAAMVDRLGRKLSMS-SMFFCCCIFLVPLL-----FQQPKGLTTGLLFGARICITVTFTVVYVYAPEI 435 (514)
Q Consensus 362 ~~~~~~~~g~~~~g~l~dr~g~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 435 (514)
...++..+++++.|++.||++||+.+. .+.+..++..+.+. ...+.+...+..++.|++.+...+. .....|.
T Consensus 265 ~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~ 343 (402)
T TIGR00897 265 TFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPL-AAVFPTL 343 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhh
Confidence 788999999999999999999887653 23333333222221 1223344445566666666655443 3455665
Q ss_pred cCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcc
Q 010268 436 YPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLF 493 (514)
Q Consensus 436 ~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 493 (514)
.| ++|++++|+.+....+++.++|.+.|.+.|..|+...+++.+++.+++.++..+.
T Consensus 344 ~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 344 AP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred Cc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 55 6899999999999999999999999999999999988888888887777766554
No 48
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=2.1e-32 Score=274.15 Aligned_cols=422 Identities=26% Similarity=0.322 Sum_probs=302.9
Q ss_pred HHHHHHHHHHHHH--HHHHHHHHHHhhhhc-----CCCc--chhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHH
Q 010268 32 AYAGMGWISEAME--MMLLSFVGPAVQSLW-----HLSP--NQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAI 102 (514)
Q Consensus 32 ~~~~l~~~~~~~~--~~~~~~~~~~~~~~~-----~~s~--~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~ 102 (514)
....++.+..+.+ ....+...+.+.++. ..+. .+.+++.+...++.++++++.|+++|++|||+.++++.+
T Consensus 48 ~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~ 127 (513)
T KOG0254|consen 48 LVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVV 127 (513)
T ss_pred HHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 3333444444443 344455555555532 2222 345999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcc-cc
Q 010268 103 VTSAAGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPR-LG 180 (514)
Q Consensus 103 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~-~g 180 (514)
+..+|.+++++++|++.++++|++.|+|.|.. .+...+++|..|++.||...+..+....+|..++..++....+. .+
T Consensus 128 ~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~ 207 (513)
T KOG0254|consen 128 LFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAG 207 (513)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCcc
Confidence 99999999999999999999999999999998 66668999999999999999999999999999996665554432 48
Q ss_pred hHHHHHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCC
Q 010268 181 WRWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDD 260 (514)
Q Consensus 181 w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (514)
||..+.+..+++++..+..+++||+|+|+.++++.+++++.+..+...+. ++.+.+.++..
T Consensus 208 Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~---------~~~~~~~~~~~---------- 268 (513)
T KOG0254|consen 208 WRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSP---------EDVEVELELLK---------- 268 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCC---------cchHHHHHHHH----------
Confidence 99999999999998887789999999999999999999988888764221 11111111110
Q ss_pred CCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhcCc
Q 010268 261 TTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWL-VFFGNAFSYYGLVLLTTELNNGQ 339 (514)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 339 (514)
.+...+....+ ....+++++++..+++...... ..+.+...+....+|.+.+++..
T Consensus 269 ----------~~~~~~~~~~~-------------~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~ 325 (513)
T KOG0254|consen 269 ----------IKLLVEAEVAE-------------GKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA 325 (513)
T ss_pred ----------HHHHHhhhccc-------------ccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhc
Confidence 00000000000 0003455555555555554444 44444444455556666666544
Q ss_pred cccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcc----cC--------c
Q 010268 340 NKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQ----QP--------K 407 (514)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~----~~--------~ 407 (514)
+ ..... .....+.++..+++.+++.++.||+|||+.++.+...+.++.+++... .. .
T Consensus 326 g----------~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (513)
T KOG0254|consen 326 G----------LKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAG 394 (513)
T ss_pred C----------CCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchh
Confidence 3 33222 556667778888899999999999999999999998888877766521 10 1
Q ss_pred c-hhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHH
Q 010268 408 G-LTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLS 486 (514)
Q Consensus 408 ~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~ 486 (514)
+ .....++....+..+..++.+.+.+|.+|.+.|+++.++.....++.+.+-......+.+..+....+..+.+++.+.
T Consensus 395 ~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~ 474 (513)
T KOG0254|consen 395 WLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLS 474 (513)
T ss_pred HHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHH
Confidence 1 222233333344555668888899999999999999999999999888887777777766655345667777777666
Q ss_pred HH-HhhcccccccCcCCCCCC
Q 010268 487 GI-SVLLFPFETTGRGLSDSL 506 (514)
Q Consensus 487 ~~-~~~~~~~~~~~~~~~~~~ 506 (514)
.. ++++..||+|+++.+|.+
T Consensus 475 ~~~fv~~~~pETkg~sleei~ 495 (513)
T KOG0254|consen 475 LIIFVFFFVPETKGLTLEEIN 495 (513)
T ss_pred HHHHheEEcccCCCCcHHHHH
Confidence 66 788899999999987654
No 49
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.8e-33 Score=252.34 Aligned_cols=433 Identities=21% Similarity=0.327 Sum_probs=314.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--------CCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChH
Q 010268 24 GKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLW--------HLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRK 95 (514)
Q Consensus 24 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~ 95 (514)
.+++...+.+..++++.+.++.+.++.+.|.+...+ ++++...+.+..+..+|..++|++.|++.||+|||+
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~ 115 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKK 115 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchh
Confidence 566777888889999999999999999998876543 256677899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhh-------hHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHH
Q 010268 96 GFLITAIVTSAAGLLSAFAP-------NYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTIL 167 (514)
Q Consensus 96 ~l~~~~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 167 (514)
++...++++.++++++++.. -..++.+.|++.|+|.|.- |...+..+|...+++||...+...+..++|.+.
T Consensus 116 vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gila 195 (538)
T KOG0252|consen 116 VYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILA 195 (538)
T ss_pred hhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhh
Confidence 99999999999998877652 2577889999999999998 888888999999999999999888888888888
Q ss_pred HHHHHHHHhc-------c--------cchHHHHHHhHHHHHHHHHHHHHccCChhhhhccCCc-hHHHHHHHHHHHHhCC
Q 010268 168 EAGIAWLVMP-------R--------LGWRWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGRT-AEARHVLEKIAKINGT 231 (514)
Q Consensus 168 ~~~i~~~l~~-------~--------~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 231 (514)
|.+++-.+.. . .=||..+.+.+++.+..+...+.+||++++.....++ +.+. ++. .+
T Consensus 196 G~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~---~d~----~k 268 (538)
T KOG0252|consen 196 GGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAA---GDM----KK 268 (538)
T ss_pred ccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhh---hcc----cc
Confidence 7777655432 1 1299999999999999999999999998875222211 1111 000 00
Q ss_pred CCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHH
Q 010268 232 KLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKST 311 (514)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 311 (514)
+.+ .+.+++++ .+.+..+. .+....+...+....-+.+
T Consensus 269 ~~~-----------------------------~~~~~~~~-~~~~~~~~------------~~~~~~F~~~f~~~hg~~L 306 (538)
T KOG0252|consen 269 VLS-----------------------------VDIEAEST-AESDVPPP------------SNSFGLFSRLFLRWHGKHL 306 (538)
T ss_pred ccc-----------------------------cccchhhc-cccCCCCc------------ccccchHHHHHHHHHHHHH
Confidence 000 00000000 00000000 0001123333333355777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcc-cCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHH
Q 010268 312 LLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSR-DINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSM 390 (514)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~ 390 (514)
+..+..+|...+.+|....+...+.+..+........ ... ..+-....+...+.++|..+...++|++||++..+.+
T Consensus 307 lgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~--~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~G 384 (538)
T KOG0252|consen 307 LGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTY--HELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMG 384 (538)
T ss_pred HHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchH--HHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhh
Confidence 8888999999999999999988888655421111000 000 0111223344556666888888899999999999999
Q ss_pred HHHHHHHhhhhhcccC-c----chhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHH
Q 010268 391 FFCCCIFLVPLLFQQP-K----GLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVA 465 (514)
Q Consensus 391 ~~~~~~~~~~~~~~~~-~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~ 465 (514)
++++.+..+.+....+ . ...+...+...++..+-......+.+|.+|.+.|++..|+....+-.|++++...+++
T Consensus 385 F~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~ 464 (538)
T KOG0252|consen 385 FFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLY 464 (538)
T ss_pred HHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhH
Confidence 9999998888875444 1 1222223333455566677888899999999999999999999999999999999999
Q ss_pred HHh-----hcCchhHHHHHHHHHHHHHHHhhcccccccCcCCCCCCCC
Q 010268 466 LVH-----GCHQTAALILFELVILLSGISVLLFPFETTGRGLSDSLPS 508 (514)
Q Consensus 466 l~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (514)
+.+ ..+....++++++++++..++.+++ ||+++++++|.+.+
T Consensus 465 ~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~-pEtk~~~leei~~e 511 (538)
T KOG0252|consen 465 LTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI-PETKGKSLEEISNE 511 (538)
T ss_pred hhhccCCccccchHHHHHHHHHHHHhHheeEEe-ecccccCHHHhcCh
Confidence 999 7778888999999888888777666 59999998876543
No 50
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=2.8e-31 Score=260.19 Aligned_cols=371 Identities=14% Similarity=0.110 Sum_probs=264.7
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHH
Q 010268 24 GKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIV 103 (514)
Q Consensus 24 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~ 103 (514)
++.....++.+++.++...+......+..|.+.+++|+|+.+.|++.+.+.+++.+++++.|++.||+|||+++..+.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~ 100 (438)
T PRK10133 21 SRSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFL 100 (438)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 34455666777778888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH---hhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc-c
Q 010268 104 TSAAGLLS---AFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMP-R 178 (514)
Q Consensus 104 ~~~~~~~~---~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~-~ 178 (514)
.+++.+++ .++++++.++++|+++|++.|.. +...+++.++.++++|.+.+++.+....+|..++|.++..+.. .
T Consensus 101 ~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~ 180 (438)
T PRK10133 101 YALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSN 180 (438)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999875 46789999999999999999988 7777888888777777778999999999999999998876541 0
Q ss_pred -------------------------cchHHHHHHhHHH-HHHHHHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCC
Q 010268 179 -------------------------LGWRWLLGLSAFP-SSLLLLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGT 231 (514)
Q Consensus 179 -------------------------~gw~~~f~~~~~~-~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (514)
.+||.+|+....+ .++.++. ...+||.+. +++.++..
T Consensus 181 ~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~----~~~~~~~~------------ 244 (438)
T PRK10133 181 VPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQS----DNHSDAKQ------------ 244 (438)
T ss_pred CcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc----cccccccc------------
Confidence 2566666543333 2232222 222333210 00000000
Q ss_pred CCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHH
Q 010268 232 KLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKST 311 (514)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 311 (514)
.......+.+++++..+..
T Consensus 245 -------------------------------------------------------------~~~~~~~~~ll~~~~~~~~ 263 (438)
T PRK10133 245 -------------------------------------------------------------GSFSASLSRLARIRHWRWA 263 (438)
T ss_pred -------------------------------------------------------------cchhhhHHHHHhCchHHHH
Confidence 0000123334443322222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHH
Q 010268 312 LLLWLVFFGNAFSYYGLVLLTTELN-NGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSM 390 (514)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~ 390 (514)
. +..++.....++...|.+.+. ++. .+.++..++.......++.++|+++++++.||+++|+++..+
T Consensus 264 ~---l~~~~~~~~~~~~~~~~~~~l~~~~---------~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~ 331 (438)
T PRK10133 264 V---LAQFCYVGAQTACWSYLIRYAVEEI---------PGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAY 331 (438)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHhhhc---------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 2 222333333333444555442 221 237888888899999999999999999999999999988888
Q ss_pred HHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhc
Q 010268 391 FFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGC 470 (514)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~ 470 (514)
..+.++.++......+. .......+.|++.+..+|...+...+..|+ ..+++.++.. ...+|+.++|.+.|.+.|..
T Consensus 332 ~~~~~~~~~~~~~~~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~-~~~~g~~~~~~i~G~l~~~~ 408 (438)
T PRK10133 332 ALIAMALCLISAFAGGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIV-MTIIGGGIVTPVMGFVSDAA 408 (438)
T ss_pred HHHHHHHHHHHHHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHHh-HHhccchHHHHHHHHHHHhc
Confidence 77766555544444332 334566778999999999999999999875 4677888776 45578999999999999988
Q ss_pred C-chhHHHHHHHHHHHH
Q 010268 471 H-QTAALILFELVILLS 486 (514)
Q Consensus 471 g-~~~~~~~~~~~~~~~ 486 (514)
| ....+++..+..+..
T Consensus 409 g~~~~~~~v~~~~~~~~ 425 (438)
T PRK10133 409 GNIPTAELIPALCFAVI 425 (438)
T ss_pred cchHHHHHHHHHHHHHH
Confidence 7 455555444443333
No 51
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=1.5e-31 Score=259.41 Aligned_cols=363 Identities=16% Similarity=0.121 Sum_probs=258.8
Q ss_pred HHHHHHHHHHHHHHHHHHH-hhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHH-HHHHHHHHHHHHhh
Q 010268 36 MGWISEAMEMMLLSFVGPA-VQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLI-TAIVTSAAGLLSAF 113 (514)
Q Consensus 36 l~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~-~~~~~~~~~~~~~~ 113 (514)
+.++...+......+.+|. +.+++|.|+.++|++.+++.+...+.+++.|+++||+||||.++. +..+..++.++.++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 83 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW 83 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh
Confidence 3456667777777787776 567899999999999999999999999999999999999887654 56666677788889
Q ss_pred hhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHH--HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHH
Q 010268 114 APNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFW--MVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAF 190 (514)
Q Consensus 114 ~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~ 190 (514)
+++++.+++.|++.|.+.+.. +...++..|+.++++|++. .+....+.++|.+++|.+++.+.+.+|||+.|++.++
T Consensus 84 ~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~ 163 (375)
T TIGR00899 84 NRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAAL 163 (375)
T ss_pred cchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHH
Confidence 999999999999988777666 6666788888887777654 6788888999999999999999998999999999888
Q ss_pred HHHHHHHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccC
Q 010268 191 PSSLLLLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARD 269 (514)
Q Consensus 191 ~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (514)
..++..+. ++++||.|+....+.+ +.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~------------------------------------------------- 190 (375)
T TIGR00899 164 AFVLCGVLVWLFLPSYPRGAPGALT----RL------------------------------------------------- 190 (375)
T ss_pred HHHHHHHHHHHhCCCcccCcccccC----cc-------------------------------------------------
Confidence 77766554 4557776531100000 00
Q ss_pred CCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccC
Q 010268 270 EDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQS 349 (514)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (514)
..+..++++..+........ ..........+.|.+..+. .
T Consensus 191 ----------------------------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~---------~ 230 (375)
T TIGR00899 191 ----------------------------EVRGLLASRDTRLLFVACTL---MWGCNILYIINMPLLIIHE---------L 230 (375)
T ss_pred ----------------------------hhhhhhcCcchHHHHHHHHH---HHHHHHHHHhhhHHHHHHH---------c
Confidence 00111111111222211111 1111122223334433211 1
Q ss_pred CCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhccccccee
Q 010268 350 GKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVY 429 (514)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 429 (514)
+.++...+..........+++.++.|++.||++||+.+..+.++..+....+...++.+.......+.+++.+...+...
T Consensus 231 g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 310 (375)
T TIGR00899 231 GLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGM 310 (375)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 25555566666666667788889999999999999988877766655555444444555555556666777777777777
Q ss_pred eccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhc
Q 010268 430 VYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLL 492 (514)
Q Consensus 430 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 492 (514)
.+..|..|+ ++++++|+.+...++|..++|.+.|.+.+..|+...+.+.+++.+++.++..+
T Consensus 311 ~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 311 LYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 888888875 56799999999999999999999999999999888888877777666665543
No 52
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=3e-31 Score=258.36 Aligned_cols=341 Identities=15% Similarity=0.202 Sum_probs=251.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhh
Q 010268 37 GWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPN 116 (514)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~ 116 (514)
..+..........+..|.+.+++|.|+.+.|++.+++.++..++++++|+++||+|||+.+..+.++.+++.++..++++
T Consensus 13 ~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~ 92 (385)
T TIGR00710 13 LSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNN 92 (385)
T ss_pred HHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHcc
Confidence 34555667778888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHH
Q 010268 117 YYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLL 195 (514)
Q Consensus 117 ~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~ 195 (514)
++.+++.|++.|++.+.. +...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+||..|++.++..++.
T Consensus 93 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 172 (385)
T TIGR00710 93 IETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILL 172 (385)
T ss_pred HHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 999999999999999988 7777899999999999999999999999999999999999999899999999888777766
Q ss_pred HHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchh
Q 010268 196 LLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSIS 274 (514)
Q Consensus 196 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (514)
.+. .++.||+++.. ++++.++
T Consensus 173 ~~~~~~~~~~~~~~~----~~~~~~~------------------------------------------------------ 194 (385)
T TIGR00710 173 SALIFFILPETLPYE----ARIQIST------------------------------------------------------ 194 (385)
T ss_pred HHHHHHhCCCCCCCc----ccCCHHH------------------------------------------------------
Confidence 544 44456543210 0000000
Q ss_pred HhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCccc
Q 010268 275 EAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRD 354 (514)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (514)
....++.+++++..+. ..+........++....+.|.+..+. .+.++.
T Consensus 195 --------------------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---------~g~~~~ 242 (385)
T TIGR00710 195 --------------------YFETFLLLLKSKMFWG---YALIYGASFGGFFAFFSGAPFVYIDI---------MGVSPS 242 (385)
T ss_pred --------------------HHHHHHHHHcCchhHH---HHHHHHHHHHHHHHHHHcChHHHHHH---------cCCCHH
Confidence 0012333333322222 22222222333334444455544311 226666
Q ss_pred CcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcc---c-C-cchhHHHHHHHHhhhccccccee
Q 010268 355 INYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQ---Q-P-KGLTTGLLFGARICITVTFTVVY 429 (514)
Q Consensus 355 ~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~---~-~-~~~~~~~~~~~g~~~~~~~~~~~ 429 (514)
..+.......++.++++++.+++.||+++|+.+..+..+..+..+.+... . + .........+.+++.+...+...
T Consensus 243 ~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 322 (385)
T TIGR00710 243 VFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAM 322 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777888889999999999999999999998877776666555444321 1 1 22333345566777777778888
Q ss_pred eccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHh
Q 010268 430 VYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVH 468 (514)
Q Consensus 430 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~ 468 (514)
....|..| +.++++.++.+.....++.+.+.+.+.+.+
T Consensus 323 ~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~ 360 (385)
T TIGR00710 323 AYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLIHG 360 (385)
T ss_pred HHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 88888877 678999999998888666666666664443
No 53
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=1.4e-32 Score=267.19 Aligned_cols=368 Identities=17% Similarity=0.209 Sum_probs=260.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhh
Q 010268 36 MGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAP 115 (514)
Q Consensus 36 l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~ 115 (514)
++++..+.++..+++..|.+.+++|.|..+.|++.+++.++..+++++.|+++||+|||+.++++.++.+++.++..+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 81 (379)
T TIGR00881 2 IGYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST 81 (379)
T ss_pred chhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh
Confidence 35677888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHH-HHHHHHhcccchHHHHHHhHHHHH
Q 010268 116 NYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEA-GIAWLVMPRLGWRWLLGLSAFPSS 193 (514)
Q Consensus 116 ~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~-~i~~~l~~~~gw~~~f~~~~~~~~ 193 (514)
+++.+++.|++.|++.+.. +...+++.|++|+++|++++++...+..+|..++| .++..+.+..+||..|++.+++.+
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (379)
T TIGR00881 82 SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAI 161 (379)
T ss_pred hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence 9999999999999999987 77788999999999999999999999999999999 567777778899999998887776
Q ss_pred HHHHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCc
Q 010268 194 LLLLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDS 272 (514)
Q Consensus 194 i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (514)
+..+. +++.+|+|+....+..++ . .++ +.+++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~---------------------~------------------~~~-----~~~~~~~- 196 (379)
T TIGR00881 162 IVSLICFLLLRDSPQSCGLPPAEE---------------------M------------------PNE-----EPDGDAE- 196 (379)
T ss_pred HHHHHHheeeCCCccccccCcccc---------------------C------------------ccc-----ccccccc-
Confidence 65444 455566543110000000 0 000 0000000
Q ss_pred hhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCc
Q 010268 273 ISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKS 352 (514)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (514)
+++++ ........+.+++++ .++...+..+...........+.|.+..+. .+.+
T Consensus 197 ----~~~~~----------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~g~~ 250 (379)
T TIGR00881 197 ----KKEEE----------LTKKQIFLQYVLLNK---VLWYISLGYVFVYVVRTGILDWSPLYLTQE---------KGFS 250 (379)
T ss_pred ----ccccc----------ccchHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------hCCC
Confidence 00000 000011233444432 233333334444444455556666665332 1266
Q ss_pred ccCcccchhhhhhchhhHHHHHHHHHHHHhh-HH-HHHHHH-HHHHHHhhhhhc--ccCcchhHHHHHHHHhhhcccccc
Q 010268 353 RDINYGDVFITSFAEFPGLLLAAAMVDRLGR-KL-SMSSMF-FCCCIFLVPLLF--QQPKGLTTGLLFGARICITVTFTV 427 (514)
Q Consensus 353 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~-~~-~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~ 427 (514)
....+.......++.++++++.+++.||..+ |+ .+.... ....+....+.. ..+.+......++.|++..+..+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 330 (379)
T TIGR00881 251 KEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQML 330 (379)
T ss_pred HHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHH
Confidence 6677788888899999999999999998643 32 222222 222222222222 122233334445555555555556
Q ss_pred eeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchh
Q 010268 428 VYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTA 474 (514)
Q Consensus 428 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~ 474 (514)
...+..|.+|++.|+++.|+.+....+|+.++|.+.|.+.|..|+..
T Consensus 331 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 377 (379)
T TIGR00881 331 IGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAG 377 (379)
T ss_pred HHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccc
Confidence 66788999999999999999999999999999999999999988654
No 54
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=9.4e-32 Score=270.06 Aligned_cols=395 Identities=15% Similarity=0.164 Sum_probs=280.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHH
Q 010268 30 VLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGL 109 (514)
Q Consensus 30 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~ 109 (514)
++..+.++.+...++....++..|.+.+++|.|..+.+++.+.+.++..++.++.|+++||+|||+.++++.++..++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 45567778888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHh
Q 010268 110 LSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLS 188 (514)
Q Consensus 110 ~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~ 188 (514)
+++++++++.+++.|+++|++.+.. +...+++.|++|+++|+++++++..+..+|..++|.+++++.++++||+.|++.
T Consensus 83 ~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~ 162 (485)
T TIGR00711 83 LCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLIN 162 (485)
T ss_pred HHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhh
Confidence 9999999999999999999999887 777799999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHH-HHHccCChhhhhccCCchHHHHHHHH-----HH-HHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCC
Q 010268 189 AFPSSLLLLL-YSVTPESPRYLCLKGRTAEARHVLEK-----IA-KINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDT 261 (514)
Q Consensus 189 ~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (514)
+.+.++..+. .+++||+++.. +++.+........ .. .....+ . ++..+. .+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~g~~l~~~~~~~~~~~~~~~~-~-~~~~~~--~~~~~------------- 223 (485)
T TIGR00711 163 VPIGIIVVVVAFFILPRDKPAA--SENFDFLGLLLLSVGLGSLLYGLSEGP-E-RGWFDS--NEILI------------- 223 (485)
T ss_pred hHHHHHHHHHHHHHcCCccccc--cCCCcHHHHHHHHHHHHHHHHHHhhCC-C-CCCCCc--hHHHH-------------
Confidence 8777766544 44566643211 1111111110000 00 000000 0 000000 00000
Q ss_pred CccccccCCC--chhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 010268 262 TPKEMARDED--SISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQ 339 (514)
Q Consensus 262 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (514)
.....-. -.-...+.++++ ...+.+ +++++ .++......+...+.++....+.|.+.++.
T Consensus 224 ---~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 285 (485)
T TIGR00711 224 ---LSITGLVAIIAFVVWELTDDN-----------PLVDLR-LFKYR---NFTIGCVYMSLLGLGLYGSFYLLPLYLQQV 285 (485)
T ss_pred ---HHHHHHHHHHHHHHHHHcCCC-----------CccCHH-HHcCC---ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0000000 000000000000 000122 22222 122223333444455555666677766432
Q ss_pred cccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhc--c--cCcchhHHHHH
Q 010268 340 NKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLF--Q--QPKGLTTGLLF 415 (514)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~ 415 (514)
.+.++.+++.......++.+++.++.|++.||++||+.+..+..+.+++...+.. . .+.+......+
T Consensus 286 ---------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (485)
T TIGR00711 286 ---------LGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQF 356 (485)
T ss_pred ---------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHH
Confidence 2367777788888888999999999999999999999988888877776666552 1 12334455566
Q ss_pred HHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhc
Q 010268 416 GARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGC 470 (514)
Q Consensus 416 ~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~ 470 (514)
+.|++.+..++.......+..|++.++++.|+.+....+|+.+|+.+.|.+.++.
T Consensus 357 l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 357 IRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7778887777667777778889999999999999999999999999999998753
No 55
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=9.5e-31 Score=255.77 Aligned_cols=341 Identities=13% Similarity=0.127 Sum_probs=251.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhH
Q 010268 38 WISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNY 117 (514)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~ 117 (514)
.....+....+.+..|.+.+++|.|+++.|++.+++.++..++++++|+++||+|||+.+..+..+..++.++..+++++
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 94 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESA 94 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCH
Confidence 34455666777888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHH
Q 010268 118 YLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLL 196 (514)
Q Consensus 118 ~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~ 196 (514)
+.+++.|++.|++.+.. +...+++.|+++++++++..+.......+|..++|.+++.+.+.+|||..|++.++..++..
T Consensus 95 ~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~ 174 (401)
T PRK11043 95 AQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLI 174 (401)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Confidence 99999999999998776 55567889999999999999999999999999999999999999999999999888877776
Q ss_pred HHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHh
Q 010268 197 LLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEA 276 (514)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (514)
+..++++|+++. ++.++.+
T Consensus 175 ~~~~~~~~~~~~----~~~~~~~--------------------------------------------------------- 193 (401)
T PRK11043 175 LPTLRLKPSKKA----RKQSQDA--------------------------------------------------------- 193 (401)
T ss_pred HHHHHcCCCCCc----cccchHH---------------------------------------------------------
Confidence 666666554320 0000000
Q ss_pred hhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCc
Q 010268 277 KEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDIN 356 (514)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (514)
..++.+++++..+.... ........++....+.|.+.++.+ .+....
T Consensus 194 --------------------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~~g----------~s~~~~ 240 (401)
T PRK11043 194 --------------------LTFKQLLKSKTYLGNVL---IFAACSAAFFAWLTGSPFILEQMG----------YSPADI 240 (401)
T ss_pred --------------------HHHHHHHcChhHHHHHH---HHHHHHHHHHHHHHHhHHHHHHcC----------CCHHHH
Confidence 02333333322222111 122222333444455666654333 666666
Q ss_pred ccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhh---hhc--ccCcchhHHHHHHHHhhhcccccceeec
Q 010268 357 YGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVP---LLF--QQPKGLTTGLLFGARICITVTFTVVYVY 431 (514)
Q Consensus 357 ~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 431 (514)
+.......++.++|+++.+++.||+++|+.........+++.+. ... .++.+.......+.+++.+..++...+.
T Consensus 241 g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (401)
T PRK11043 241 GLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQ 320 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666667788899999999999999888665544443333222 111 2233333444556677777777877777
Q ss_pred cccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCch
Q 010268 432 APEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQT 473 (514)
Q Consensus 432 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~ 473 (514)
..+..| +.++++.|+.+.....++..++.+.|.+.+.....
T Consensus 321 ~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~ 361 (401)
T PRK11043 321 ALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTPLLT 361 (401)
T ss_pred HhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhH
Confidence 777776 57999999999999999999999999988754333
No 56
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=9.8e-31 Score=253.65 Aligned_cols=369 Identities=14% Similarity=0.019 Sum_probs=261.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhh
Q 010268 35 GMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFA 114 (514)
Q Consensus 35 ~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~ 114 (514)
+++.++..+.........+.+.++++.+..+.+++.+.+.+++.++++++|+++||+|||++++++.++.+++.+++.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~ 88 (393)
T PRK11195 9 MAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFG 88 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHH
Confidence 44555555544445566666789999999999999999999999999999999999999999999999999888887777
Q ss_pred hhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHH
Q 010268 115 PNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSS 193 (514)
Q Consensus 115 ~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~ 193 (514)
++. ++.|+++|++.+.. |...+++.|++|+++|++++++.+....+|.++||.+++++.+. .|+..+.+.+...+
T Consensus 89 ~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~ 164 (393)
T PRK11195 89 IHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYL 164 (393)
T ss_pred HHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 664 67899999999988 88889999999999999999999999999999999999999885 48888777766655
Q ss_pred HHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCch
Q 010268 194 LLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSI 273 (514)
Q Consensus 194 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (514)
+..+..+.+||+|+.... ++++.....++.
T Consensus 165 ~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~------------------------------------------------ 194 (393)
T PRK11195 165 LAALFNLFIPRLGARRPG--QSWNPIALLRDF------------------------------------------------ 194 (393)
T ss_pred HHHHHHhcCCCCcccccc--cCCCHHHHHHHH------------------------------------------------
Confidence 555556667776431100 000000000000
Q ss_pred hHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCc
Q 010268 274 SEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLL-WLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKS 352 (514)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (514)
...++.+++++..+..+.. .+.+.+.....+....|.+... +.+
T Consensus 195 ----------------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-------------g~s 239 (393)
T PRK11195 195 ----------------------FHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVAL-------------GIT 239 (393)
T ss_pred ----------------------HHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------------CCC
Confidence 0022334443333322222 2222222222233333333322 266
Q ss_pred ccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeecc
Q 010268 353 RDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYA 432 (514)
Q Consensus 353 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 432 (514)
+...+.......++.+++.++.+++.||.++++.+..+..+ ++..+.+...++.+......++.|++.+...+...+..
T Consensus 240 ~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~ 318 (393)
T PRK11195 240 LNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGILM-GLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALL 318 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHH
Confidence 77778888888999999999999999998888777666533 33333334444455455566677888777777777888
Q ss_pred ccccCcch-hhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhccc
Q 010268 433 PEIYPTSV-RTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFP 494 (514)
Q Consensus 433 ~~~~p~~~-~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 494 (514)
.+..|++. +|++.++.+...+++..++..+.+.+ +..|-...+.+.+...+++..+.+.++
T Consensus 319 q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK11195 319 QHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALLWR 380 (393)
T ss_pred HhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 88766654 79999999999999999999999965 666777666666655555555555444
No 57
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=4.6e-32 Score=260.78 Aligned_cols=343 Identities=25% Similarity=0.368 Sum_probs=257.0
Q ss_pred HHHHHHHHHHHHHHHHHHH-HhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhh
Q 010268 35 GMGWISEAMEMMLLSFVGP-AVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAF 113 (514)
Q Consensus 35 ~l~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~ 113 (514)
+++.+...+......+..| .+.+++|.|..++|++.+++.++..+++++.|+++||+|||++++++.++.+++.++..+
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 4566777888888899999 899999999999999999999999999999999999999999999999999999666667
Q ss_pred hhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHH
Q 010268 114 APNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPS 192 (514)
Q Consensus 114 ~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~ 192 (514)
+++++.+++.|++.|++.+.. +...+++.|++|+++|++++++.....++|.+++|.+++.+.+..+||+.|++.+++.
T Consensus 82 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~ 161 (352)
T PF07690_consen 82 ASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILS 161 (352)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHH
T ss_pred hhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchh
Confidence 788889999999999999887 7778999999999999999999999999999999999999998899999999999988
Q ss_pred HHHHHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCC
Q 010268 193 SLLLLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDED 271 (514)
Q Consensus 193 ~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (514)
++..++ .++++++++....+.+.++.
T Consensus 162 ~~~~il~~~~~~~~~~~~~~~~~~~~~----------------------------------------------------- 188 (352)
T PF07690_consen 162 LIAAILFILFLPEPPPPRERESPKESE----------------------------------------------------- 188 (352)
T ss_dssp HHHHHHHHCCC---STTTT--SSTTTT-----------------------------------------------------
T ss_pred hhhhhhHhhhhhhcccccccccccccc-----------------------------------------------------
Confidence 888664 34444443211100000000
Q ss_pred chhHhhhhccCCccccccccccchhh-HHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCC
Q 010268 272 SISEAKEMKSEDSTSTLANSNMGGIT-ALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSG 350 (514)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (514)
++.++ .+. .++.+++++..+ ......+...+.+.....+.|.+..+.. +
T Consensus 189 --~~~~~----------------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~---------~ 238 (352)
T PF07690_consen 189 --SKKPK----------------PLKPGFKSLFKNPVLW---ILLIAFFLFFFVFSGFSFFLPLYLQEVL---------G 238 (352)
T ss_dssp ----HHH----------------CCCH-CTHHHHHHCCH---HHHHHHHHHHHHHHHHHHHHHHHCCHHH---------H
T ss_pred --ccccc----------------ccccccccccccchhh---hhhhhhhHHHHHHHHhhcccchhhhhcc---------C
Confidence 00000 000 133333333222 2223333334445556667776632221 1
Q ss_pred Cc-ccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhc---ccCcchhHHHHHHHHhhhccccc
Q 010268 351 KS-RDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLF---QQPKGLTTGLLFGARICITVTFT 426 (514)
Q Consensus 351 ~~-~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~ 426 (514)
.+ ....+....+..+.+++++++.+++.||+++++..........+..+.+.. ..+........++.|++.+...+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 318 (352)
T PF07690_consen 239 FSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFP 318 (352)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 55 455567788888999999999999999999877666666555555444443 22345556677778888888899
Q ss_pred ceeeccccccCcchhhHHHHHHHHHHHHhHhHHH
Q 010268 427 VVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCP 460 (514)
Q Consensus 427 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p 460 (514)
...++..|.+|++.+|++.|+.+...++++.++|
T Consensus 319 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 319 ILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999999999999999999999999999999987
No 58
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=1.1e-30 Score=254.05 Aligned_cols=356 Identities=12% Similarity=0.061 Sum_probs=250.9
Q ss_pred HHHHHHHHHHHHHH-HHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhH
Q 010268 39 ISEAMEMMLLSFVG-PAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNY 117 (514)
Q Consensus 39 ~~~~~~~~~~~~~~-~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~ 117 (514)
++.........++. +.+.+++|+|..++|++.+...++..+.+++.|+++||+|||+++..+.++.+++.+++.+++++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~ 99 (400)
T PRK11646 20 MLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEP 99 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccH
Confidence 33344434444444 45678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHH
Q 010268 118 YLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLL 196 (514)
Q Consensus 118 ~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~ 196 (514)
+.+++.|++.|++.+.. +...+++.+++|+++|++++++.....++|..+||.+++.+. .+|||+.|++.++..++..
T Consensus 100 ~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~ 178 (400)
T PRK11646 100 WLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAA 178 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHH
Confidence 99999999999998877 667788999999999999999999999999999999999998 6799999999887766654
Q ss_pred HH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhH
Q 010268 197 LL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISE 275 (514)
Q Consensus 197 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (514)
++ .++.||.+. +...++..
T Consensus 179 i~~~~~~~~~~~----~~~~~~~~-------------------------------------------------------- 198 (400)
T PRK11646 179 AFNAWLLPAYKL----STVRTPVR-------------------------------------------------------- 198 (400)
T ss_pred HHHHHhCCcccc----cccchhhH--------------------------------------------------------
Confidence 43 344444210 00000000
Q ss_pred hhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccC
Q 010268 276 AKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDI 355 (514)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (514)
..++.+++++.... .....+.....+.....+.|.+.++.+ .++..
T Consensus 199 ---------------------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~----------~~~~~ 244 (400)
T PRK11646 199 ---------------------EGMTRVLRDKRFVT---YVLTLTGYYMLAVQVMLMLPIMVNDIA----------GSPSA 244 (400)
T ss_pred ---------------------HHHHHHHcCchHHH---HHHHHHHHHHHHHHHHHhhhhhHHhhc----------CCchH
Confidence 02233333322221 111112222222223445676654433 34444
Q ss_pred cccchhhhhhchhhHHHHHHHHHH-HHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeecccc
Q 010268 356 NYGDVFITSFAEFPGLLLAAAMVD-RLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPE 434 (514)
Q Consensus 356 ~~~~~~~~~~~~~~g~~~~g~l~d-r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 434 (514)
.+.......+....+....+++.| |++.++.+..+..+.++..+.+...++.+.......+.+++.+...|...++..+
T Consensus 245 ~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~ 324 (400)
T PRK11646 245 VKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSAS 324 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHh
Confidence 455555555555555555555554 5665666666666666666665555555555555566667777777888899999
Q ss_pred ccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcC----chhHHHHHHHHHHHHHHH
Q 010268 435 IYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCH----QTAALILFELVILLSGIS 489 (514)
Q Consensus 435 ~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g----~~~~~~~~~~~~~~~~~~ 489 (514)
..|++++|+++|+.+....+|..+||.+.|.+.|+.+ ....+...+++.++..+.
T Consensus 325 ~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 325 LADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred cCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998753 233444444444444433
No 59
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=6.2e-38 Score=311.51 Aligned_cols=413 Identities=29% Similarity=0.457 Sum_probs=297.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhh--hhcCCC---------cchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHH
Q 010268 36 MGWISEAMEMMLLSFVGPAVQ--SLWHLS---------PNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVT 104 (514)
Q Consensus 36 l~~~~~~~~~~~~~~~~~~~~--~~~~~s---------~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~ 104 (514)
++.+..+++....+...+... ..+..+ ..+.+++.+...+|..++++++|+++||+|||+.++++.++.
T Consensus 7 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~ 86 (451)
T PF00083_consen 7 LGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLM 86 (451)
T ss_pred HHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccccc
Confidence 445777777777766665544 222222 235789999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhh---hHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhccc-
Q 010268 105 SAAGLLSAFAP---NYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRL- 179 (514)
Q Consensus 105 ~~~~~~~~~~~---~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~- 179 (514)
.++.++.++++ +++.+.++|++.|++.|.. .....++.|..|+++|++..++.+.+..+|.+++..++..+....
T Consensus 87 ~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 166 (451)
T PF00083_consen 87 IIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSD 166 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999 9999999999999999998 777789999999999999999999999999999888876654433
Q ss_pred --chHHHHHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCC
Q 010268 180 --GWRWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSN 257 (514)
Q Consensus 180 --gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (514)
+||..+.+.+++.++..+..+++||+|+|+..+++.+++++.+++.++.+..++
T Consensus 167 ~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~------------------------ 222 (451)
T PF00083_consen 167 NWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDE------------------------ 222 (451)
T ss_pred cccccccccccccccccccccccccccccceecccccccccccccccccccccccc------------------------
Confidence 499999999999988888888999999999999888887776665332110000
Q ss_pred CCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhH-HHHHHHHHHHHHHHH-HHHHHHHHHHHHh
Q 010268 258 EDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPEL-IKSTLLLWLVFFGNA-FSYYGLVLLTTEL 335 (514)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 335 (514)
+.++..++.++..++ + ..++++++++. ++..+..+....... ..++...++.+.+
T Consensus 223 -------~~~~~~~~~~~~~~~--~--------------~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i 279 (451)
T PF00083_consen 223 -------EIEEIKAEKKESQES--K--------------ASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSI 279 (451)
T ss_pred -------ccccccccccccccc--c--------------eeeeecccccccccccccccccccccccccccccccccccc
Confidence 000000000000000 0 14445554432 333333333333332 2333444555555
Q ss_pred hcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhh-----cccC----
Q 010268 336 NNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLL-----FQQP---- 406 (514)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~-----~~~~---- 406 (514)
....+ .+.. ........+...++.+++.++.||+|||+.++.+..+++++.+.+. ...+
T Consensus 280 ~~~~~----------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (451)
T PF00083_consen 280 FENAG----------ISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWW 347 (451)
T ss_pred ccccc----------cccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 54332 3333 3334455567777888888999999999999888888777665553 1121
Q ss_pred cchhHHHHHHHHhhhc-ccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHH
Q 010268 407 KGLTTGLLFGARICIT-VTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILL 485 (514)
Q Consensus 407 ~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~ 485 (514)
.........+..++.+ +..+..+.+..|.+|++.|+++.|+...+++++++++|.+...+.+..+....+.++++++++
T Consensus 348 ~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i 427 (451)
T PF00083_consen 348 SILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLI 427 (451)
T ss_pred ccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHH
Confidence 1222222222222222 556778899999999999999999999999999999999999988887766778888888888
Q ss_pred HHHHhhcccccccCcCCCCCCC
Q 010268 486 SGISVLLFPFETTGRGLSDSLP 507 (514)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~ 507 (514)
..++.+++.||+|+++++|.++
T Consensus 428 ~~i~~~~~lpET~g~~l~ei~~ 449 (451)
T PF00083_consen 428 AIIFVYFFLPETKGKTLEEIQE 449 (451)
T ss_pred HHhheeEEEeeCCCCCHHHHHh
Confidence 8888899999999999887654
No 60
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=2.9e-30 Score=251.60 Aligned_cols=350 Identities=18% Similarity=0.089 Sum_probs=241.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhh
Q 010268 35 GMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFA 114 (514)
Q Consensus 35 ~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~ 114 (514)
....+..........+.+|.+.+++|.|..+.+++.+.+.++..+++++.|+++||+|||+.++.+.++..++.+++.++
T Consensus 9 ~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~ 88 (392)
T PRK10473 9 FALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLA 88 (392)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHh
Confidence 33445555555666788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHH
Q 010268 115 PNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSS 193 (514)
Q Consensus 115 ~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~ 193 (514)
++++.+++.|++.|++.+.. +...+++.|++++++|++++++.+....+|..++|.+++.+.+..|||..|++.++..+
T Consensus 89 ~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~ 168 (392)
T PRK10473 89 ETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGI 168 (392)
T ss_pred CcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHH
Confidence 99999999999999998887 66778999999999999999999999999999999999998888899999999887777
Q ss_pred HHHHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCc
Q 010268 194 LLLLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDS 272 (514)
Q Consensus 194 i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (514)
+..++ .+.+||+++.. +++....
T Consensus 169 i~~~~~~~~~~~~~~~~--~~~~~~~------------------------------------------------------ 192 (392)
T PRK10473 169 LVLLLSLFILKETRPAR--APAASSK------------------------------------------------------ 192 (392)
T ss_pred HHHHHHHHHcCCCCCcc--cCCccch------------------------------------------------------
Confidence 66544 45566643210 0000000
Q ss_pred hhHhhhhccCCccccccccccchhhHHHHhh-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCC
Q 010268 273 ISEAKEMKSEDSTSTLANSNMGGITALLILL-SPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGK 351 (514)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (514)
.+..+..+ +++.+...+...+... .......+.|.+..+. .+.
T Consensus 193 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~---------~g~ 236 (392)
T PRK10473 193 -----------------------PRENSESLLNRFFLSRLVITTLSVT----VILTFVNTSPVLLMEQ---------MGF 236 (392)
T ss_pred -----------------------HHHHHHHHhCHHHHHHHHHHHHHHH----HHHHHHHhCHHHHHHH---------cCC
Confidence 00111122 2222222222211111 1112222333333211 135
Q ss_pred cccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeec
Q 010268 352 SRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVY 431 (514)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 431 (514)
+....+.......++.++++++.+++.||+|+|+.+..+..+..+..+.+....+.+.......+.+.+.+...+.. .
T Consensus 237 ~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~ 314 (392)
T PRK10473 237 SRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGVA--M 314 (392)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH--H
Confidence 66666777778888999999999999999999999888888777766665554433333333333333333333322 2
Q ss_pred cccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHH
Q 010268 432 APEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFEL 481 (514)
Q Consensus 432 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~ 481 (514)
..+..|.+.++ |.......++..+++.+.+++.++.|+.......+.
T Consensus 315 ~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~ 361 (392)
T PRK10473 315 SQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGI 361 (392)
T ss_pred HHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 33444544443 444455567777888888888887776544444443
No 61
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=2.8e-30 Score=251.99 Aligned_cols=362 Identities=12% Similarity=-0.009 Sum_probs=250.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhh
Q 010268 34 AGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAF 113 (514)
Q Consensus 34 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~ 113 (514)
+.+..+..........+.+|.+.+++|.|..+.++..+++.+++.++++++|+++||+|||++++.+.++.+++.+++.+
T Consensus 21 ~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 100 (413)
T PRK15403 21 LILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLF 100 (413)
T ss_pred HHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHH
Confidence 34445566677788889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHH
Q 010268 114 APNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPS 192 (514)
Q Consensus 114 ~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~ 192 (514)
+++++.++++|+++|++.+.. +....++.|++++++|++++++......+|..+||.+++.+.+..|||+.|++.++..
T Consensus 101 a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~ 180 (413)
T PRK15403 101 TTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMG 180 (413)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 999999999999999998765 4455778899999999999999999999999999999999998889999999988887
Q ss_pred HHHHHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCC
Q 010268 193 SLLLLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDED 271 (514)
Q Consensus 193 ~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (514)
++..+. ++.+||+++. +++..+.++
T Consensus 181 ~i~~~~~~~~lp~~~~~---~~~~~~~~~--------------------------------------------------- 206 (413)
T PRK15403 181 LIAFVGLLLAMPETVKR---GAVPFSAKS--------------------------------------------------- 206 (413)
T ss_pred HHHHHHHHHhCCCCccc---cCCCCChHH---------------------------------------------------
Confidence 776554 4557775421 000000000
Q ss_pred chhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCC
Q 010268 272 SISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGK 351 (514)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (514)
..+.++.+++++ .++...+..+.....++....+.|.+.++.. +.
T Consensus 207 -----------------------~~~~~~~ll~~~---~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~---------g~ 251 (413)
T PRK15403 207 -----------------------VLRDFRNVFRNR---LFLTGAATLSLSYIPMMSWVAVSPVILIDAG---------GM 251 (413)
T ss_pred -----------------------HHHHHHHHHcCH---HHHHHHHHHHHHHHHHHHHHHhChHHHHHhc---------CC
Confidence 011344444442 3333333334444455555566676664331 26
Q ss_pred cccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhh----cccCcc-hhHHHHHHHHhhhccccc
Q 010268 352 SRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLL----FQQPKG-LTTGLLFGARICITVTFT 426 (514)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~g~~~~~~~~ 426 (514)
++...++.......+.+++..+.+++.++..+++.......+..++.+.+. ...+.+ ...+..++.+++.+...|
T Consensus 252 s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p 331 (413)
T PRK15403 252 TTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFP 331 (413)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhH
Confidence 666666666666667777777777766443333322211111111111111 122222 234455666677777666
Q ss_pred ceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHH
Q 010268 427 VVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLS 486 (514)
Q Consensus 427 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~ 486 (514)
......-+. ....+|++.++.+.....+...++...|++.++ +...++...+++..+.
T Consensus 332 ~~~~~al~~-~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~ 389 (413)
T PRK15403 332 TLFRFTLFS-NNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGVI 389 (413)
T ss_pred HHHHHHhcc-CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHHH
Confidence 666332211 122369999999999999999999999998777 4555665555544443
No 62
>PRK10054 putative transporter; Provisional
Probab=100.00 E-value=6.5e-31 Score=255.05 Aligned_cols=364 Identities=14% Similarity=0.116 Sum_probs=258.5
Q ss_pred HHHHHHHHHHHHHHHHHH-HhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhh
Q 010268 36 MGWISEAMEMMLLSFVGP-AVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFA 114 (514)
Q Consensus 36 l~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~ 114 (514)
+..++.........+.+| .+.+++|+|..++|++.+.+.++..+++++.|+++||+|||++++++.++..++.++..++
T Consensus 14 ~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~ 93 (395)
T PRK10054 14 ASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV 93 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH
Confidence 344555566556555555 5567899999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHH
Q 010268 115 PNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSS 193 (514)
Q Consensus 115 ~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~ 193 (514)
++++.+++.|++.|.+.+.. +...++..|..++++|++++++.....++|.+++|.+++.+.+ .+|+..|++.++..+
T Consensus 94 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~ 172 (395)
T PRK10054 94 NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSA 172 (395)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHH
Confidence 99999998998888877766 6667888999999999999999999999999999999998875 799999998887777
Q ss_pred HHHHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCc
Q 010268 194 LLLLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDS 272 (514)
Q Consensus 194 i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (514)
+.++. .+++||+++. ++.++ ++.
T Consensus 173 i~~i~~~~~~~~~~~~----~~~~~-~~~--------------------------------------------------- 196 (395)
T PRK10054 173 FPLVFIQIWVQRSEKA----IATET-GSV--------------------------------------------------- 196 (395)
T ss_pred HHHHHHHHHHhccccc----cccch-hhh---------------------------------------------------
Confidence 76544 4445554210 00000 000
Q ss_pred hhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCc
Q 010268 273 ISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKS 352 (514)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (514)
...+..++++..+. .....++....+.....+.+.+..... +.+.+
T Consensus 197 ------------------------~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~-------~~~~~ 242 (395)
T PRK10054 197 ------------------------WSPSVLLQDKALLW---FTCSGFLASFVSGAFASCISQYVMVVA-------DSDFA 242 (395)
T ss_pred ------------------------hhhhhhccCceehH---HHHHHHHHHHHHHHhhhhHHHHHHHhc-------ccchH
Confidence 00111222221111 112222222222222122222221100 11234
Q ss_pred ccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcc-cCcchhHHHHHHHHhhhcccccceeec
Q 010268 353 RDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQ-QPKGLTTGLLFGARICITVTFTVVYVY 431 (514)
Q Consensus 353 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~ 431 (514)
....+.......+.........+++.||.++|+.+..+..+.++....+... ++.+...+...+.+++.+...|...+.
T Consensus 243 ~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~ 322 (395)
T PRK10054 243 EKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYML 322 (395)
T ss_pred HHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 4444566666667777778888999999999998888887777766655543 344444556677777777777788888
Q ss_pred cccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhh
Q 010268 432 APEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVL 491 (514)
Q Consensus 432 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 491 (514)
+.+..|++.+++++|..+ ...+|..+||.++|.+.|+.|....+++.+++..++.++..
T Consensus 323 ~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 323 IDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 999999999999998765 66799999999999999999888777776666555555444
No 63
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=100.00 E-value=1.8e-30 Score=251.41 Aligned_cols=362 Identities=11% Similarity=-0.016 Sum_probs=267.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHH-HHHHH-HHHH
Q 010268 34 AGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAI-VTSAA-GLLS 111 (514)
Q Consensus 34 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~-~~~~~-~~~~ 111 (514)
+.+.++..+.......|++|.+.+++|.|..++|++.+.+.+...++++++|+++||+|||+....... ...+. ....
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~ 88 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFS 88 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 445567777777888999999999999999999999999999999999999999999998544322211 11111 1234
Q ss_pred hhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHH
Q 010268 112 AFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAF 190 (514)
Q Consensus 112 ~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~ 190 (514)
.++++++.+++.|++.|.+.+.. +...++..++ +++|++..|....+.++|.+++|++++.+.+.+|||..|++.++
T Consensus 89 ~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~ 166 (382)
T TIGR00902 89 AGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTA 166 (382)
T ss_pred HhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 46788999999999999888776 7666776554 46789999999999999999999999999999999999988765
Q ss_pred HHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCC
Q 010268 191 PSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDE 270 (514)
Q Consensus 191 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (514)
..++.+ ..+.++++++. +++.++ + +
T Consensus 167 ~~~~~~-~~~~~~~~~~~---~~~~~~-~--------------------------------------------------~ 191 (382)
T TIGR00902 167 GLAFML-IGFLIKPTIPP---KDAIPE-D--------------------------------------------------E 191 (382)
T ss_pred HHHHHH-HHHHcCCCCCC---Cccccc-c--------------------------------------------------c
Confidence 533333 33333332110 000000 0 0
Q ss_pred CchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCC
Q 010268 271 DSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSG 350 (514)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (514)
. ...+.++++++++.. +...+..++..........+.|.+.++.+
T Consensus 192 ~----------------------~~~~~~~~~l~~~~~---~~~l~~~~l~~~~~~~~~~~~~~~l~~~g---------- 236 (382)
T TIGR00902 192 S----------------------QGDSAFIALLKNPMN---LRFLAAVCLIQGAHAAYYGFSAIYWQAAG---------- 236 (382)
T ss_pred c----------------------ccchhHHHHHcChHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCC----------
Confidence 0 000133445554332 22223333333444444455666654443
Q ss_pred CcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceee
Q 010268 351 KSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYV 430 (514)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 430 (514)
.+....+....+..++.+++.++.+++.||+|.|+.+..+.++.++....+.+.++.+.......+.+++.+...+....
T Consensus 237 ~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~ 316 (382)
T TIGR00902 237 ISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMR 316 (382)
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777788888889999999999999999999999999999999998888887778787888889999999999999999
Q ss_pred ccccccCcchhhHHHHHHHH-HHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q 010268 431 YAPEIYPTSVRTTGVGVASS-IGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGIS 489 (514)
Q Consensus 431 ~~~~~~p~~~~~~~~g~~~~-~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 489 (514)
++.+. |++.+++.+++.+. ...+|..++|.+.|.+.|+.|. ..++..+++.+++.++
T Consensus 317 ~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 317 YIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 99988 98899999999874 4569999999999999999975 5677777766655433
No 64
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=100.00 E-value=3.8e-30 Score=249.96 Aligned_cols=346 Identities=14% Similarity=0.101 Sum_probs=255.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHH
Q 010268 31 LAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLL 110 (514)
Q Consensus 31 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~ 110 (514)
++.+++.++..++.....+++.|.+++++|+|..+.|++.+.+.+++.+++++.|++.||+|||++++++.++.+++.++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l 84 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFL 84 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 34555667777888888899999999999999999999999999999999999999999999999999999999999888
Q ss_pred Hhh---hhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcc--------
Q 010268 111 SAF---APNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPR-------- 178 (514)
Q Consensus 111 ~~~---~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~-------- 178 (514)
+.. .++++.+++.|++.|+|.|.. +...+++.+..|+++|++.+++.+...++|..++|.++..+...
T Consensus 85 ~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~ 164 (410)
T TIGR00885 85 FWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQD 164 (410)
T ss_pred HHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhh
Confidence 654 357999999999999999998 77778999999999999999999999999999999998877422
Q ss_pred ------------------cchHHHHHHhHHHHHHHHHHHHHc--cCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCC
Q 010268 179 ------------------LGWRWLLGLSAFPSSLLLLLYSVT--PESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNL 238 (514)
Q Consensus 179 ------------------~gw~~~f~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (514)
.+||.+|++.+++.++..++..+. |+.++ ++.+ +.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~-----~~~~--~~------------------ 219 (410)
T TIGR00885 165 VLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH-----SDAK--QI------------------ 219 (410)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----cccc--cc------------------
Confidence 369999998888776655444332 22110 0000 00
Q ss_pred CCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHH
Q 010268 239 VSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVF 318 (514)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 318 (514)
+. ....+.+++++..+. ..+..
T Consensus 220 ---------------------------------~~----------------------~~~~~~~~~~~~~~~---~~l~~ 241 (410)
T TIGR00885 220 ---------------------------------SF----------------------SASLSRLARIRHYRE---GVIAQ 241 (410)
T ss_pred ---------------------------------cc----------------------hhhHHHHHhChhHHH---HHHHH
Confidence 00 001222333322222 22233
Q ss_pred HHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Q 010268 319 FGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFL 398 (514)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 398 (514)
+++.........+.+.+..+.+ .+.+...+............+|+++++++.||+++|+.+.++..++++..
T Consensus 242 f~yvg~e~~~~s~l~~y~~~~~--------~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ 313 (410)
T TIGR00885 242 FFYVGVQIMCWTFIIQYAVRLI--------PGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALC 313 (410)
T ss_pred HHHHHHHHHHHHHHHHHHhhcc--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 3333333344455666553221 01222223334555567789999999999999999999888888888777
Q ss_pred hhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhc
Q 010268 399 VPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGC 470 (514)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~ 470 (514)
++....++. .....+.+.+++.+..+|..++...+..+++.+..+.++...+ +|+.+.|.+.|.+.|..
T Consensus 314 ll~~~~~~~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~ 382 (410)
T TIGR00885 314 LGSIFAGGH-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMK 382 (410)
T ss_pred HHHHHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHh
Confidence 777665543 3456677788889999999999999999977665556655544 99999999999999954
No 65
>PRK11010 ampG muropeptide transporter; Validated
Probab=100.00 E-value=5.1e-30 Score=254.82 Aligned_cols=370 Identities=15% Similarity=0.120 Sum_probs=260.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhh-----CChHH-HHHHHHHHHH
Q 010268 33 YAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNF-----GRRKG-FLITAIVTSA 106 (514)
Q Consensus 33 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~-----G~r~~-l~~~~~~~~~ 106 (514)
.+++..+..+......+..+|.+.++.|.|..++|.+ +.....+ ++.+++|+++||+ |||+. ++.+.++.++
T Consensus 16 ~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~ 93 (491)
T PRK11010 16 ILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLV 93 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHH
Confidence 3445556777888888999999999999999999997 4444443 6899999999999 99885 6677777777
Q ss_pred HHHHHhhh---hhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc-ccch
Q 010268 107 AGLLSAFA---PNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMP-RLGW 181 (514)
Q Consensus 107 ~~~~~~~~---~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~-~~gw 181 (514)
+..++++. ++++.+.+.+++.|++.+.. +...++..|++|+++|+++.++...+..+|.++++.++.++.+ ..||
T Consensus 94 ~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GW 173 (491)
T PRK11010 94 AIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGW 173 (491)
T ss_pred HHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCH
Confidence 77777665 46888999999999988877 6667999999999999999999999999999999999999988 5799
Q ss_pred HHHHHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCC
Q 010268 182 RWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDT 261 (514)
Q Consensus 182 ~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (514)
|..|++.+++.++..+..++.||+++.. +++++.++ +
T Consensus 174 r~~f~i~a~l~ll~~l~~~~~~e~~~~~---~~~~~~~~---~------------------------------------- 210 (491)
T PRK11010 174 QGMYWLMAALLIPCIIATLLAPEPTDTI---PVPKTLEQ---A------------------------------------- 210 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcccc---ccccchhh---h-------------------------------------
Confidence 9999999888777766666677754210 00000000 0
Q ss_pred CccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcc
Q 010268 262 TPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELN-NGQN 340 (514)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 340 (514)
...+++++++++..+...... +......+....+.+.+. ++.
T Consensus 211 ---------------------------------~~~~l~~~~~~~~~~~~ll~~---~l~~~~~~~~~~~~~~~l~~~~- 253 (491)
T PRK11010 211 ---------------------------------VVAPLRDFFGRNNAWLILLLI---VLYKLGDAFAMSLTTTFLIRGV- 253 (491)
T ss_pred ---------------------------------HHHHHHHHHcCcCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhc-
Confidence 001344444433222222222 122222222233333333 222
Q ss_pred ccccccccCCCcccCcccch-hhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhh---hcc-cCcchhHHHHH
Q 010268 341 KCVSNELQSGKSRDINYGDV-FITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPL---LFQ-QPKGLTTGLLF 415 (514)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~ 415 (514)
+.+....+... ....++.++|.+++|++.||+|+|+.+..+.++.++..+.+ ... ++.+......+
T Consensus 254 ---------G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~ 324 (491)
T PRK11010 254 ---------GFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVF 324 (491)
T ss_pred ---------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 37777777665 45567899999999999999999887766555444433222 222 22223333344
Q ss_pred HHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcc
Q 010268 416 GARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLF 493 (514)
Q Consensus 416 ~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 493 (514)
+..++.+...+...++..+..+++.+++.+|+.+....+|..+++.+.|.+.|..|+...|.+.+++.+++.+.....
T Consensus 325 l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 325 FENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 434444444566678888889988999999999999999999999999999999998887888777777776666554
No 66
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.4e-30 Score=248.15 Aligned_cols=363 Identities=21% Similarity=0.329 Sum_probs=278.5
Q ss_pred hhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHhhhccch
Q 010268 57 SLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPN--YYLLLFFRCLVGLGLGGG 134 (514)
Q Consensus 57 ~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~--~~~l~~~r~l~G~~~g~~ 134 (514)
.++++|..+.|++.+.+..|+.+++++.|+++||+|.|+++..+.++.++++++...+.+ ++.+++.|+++|++.|..
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVL 145 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHH
Confidence 368899999999999999999999999999999999999999999999999999988754 567889999999999998
Q ss_pred -hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcc-cchHHHHHHhHHHHHHHHHHHHH-ccCChhhhhc
Q 010268 135 -PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPR-LGWRWLLGLSAFPSSLLLLLYSV-TPESPRYLCL 211 (514)
Q Consensus 135 -~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~-~gw~~~f~~~~~~~~i~~~~~~~-~~~~~~~~~~ 211 (514)
|+...+...|.|++||++..++..++..+|.+++.++++++.+. +||+..|++.++.+++..+++++ ..|+|..
T Consensus 146 ~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~--- 222 (466)
T KOG2532|consen 146 FPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK--- 222 (466)
T ss_pred HhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc---
Confidence 88889999999999999999999999999999999999999998 99999999999999998777554 4556542
Q ss_pred cCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCcccccccc
Q 010268 212 KGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANS 291 (514)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (514)
++.-..+.++.+.+.+... +.+
T Consensus 223 --h~~is~~El~~I~~~k~~~--------------------------------------------------------~~~ 244 (466)
T KOG2532|consen 223 --HPNISEKELKYIEKGKSEA--------------------------------------------------------HVK 244 (466)
T ss_pred --CCCCCHHHHHHHHhccccc--------------------------------------------------------ccC
Confidence 1111111112221110000 000
Q ss_pred ccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHH
Q 010268 292 NMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGL 371 (514)
Q Consensus 292 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 371 (514)
++ ...+++.+++. +.+|.+++..++....++.+..+.|.|.++.. +++....++..++..+...+..
T Consensus 245 ~~-~~vP~~~i~ts---~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL---------~f~v~~~G~~salP~l~~~~~k 311 (466)
T KOG2532|consen 245 KK-PPVPYKAILTS---PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVL---------GFDVRETGFLSALPFLAMAIVK 311 (466)
T ss_pred CC-CCCCHHHHHcC---HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHh---------CCChhhhhHHHHHHHHHHHHHH
Confidence 00 12378888887 67788888889999999999999999987654 3888888999999999999999
Q ss_pred HHHHHHHHHHhh---------HHHHHHHHHHHHHHhhhhhcccCcch-hHHHHHHHHhhhccc-ccceeeccccccCcch
Q 010268 372 LLAAAMVDRLGR---------KLSMSSMFFCCCIFLVPLLFQQPKGL-TTGLLFGARICITVT-FTVVYVYAPEIYPTSV 440 (514)
Q Consensus 372 ~~~g~l~dr~g~---------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~-~~~~~~~~~~~~p~~~ 440 (514)
+++|.++||+.+ |..-.++....+++++.+.+...... ..+.++....+..+. .+..+.-..+.. +++
T Consensus 312 ~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~a-pq~ 390 (466)
T KOG2532|consen 312 FVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIA-PQH 390 (466)
T ss_pred HHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhcc-chH
Confidence 999999999854 33445666777777777776653222 233333333333333 333333333334 488
Q ss_pred hhHHHHHHHHHHHHhHhHHHHHHHHHHh---hcCchhHHHHHHHHHHHHHHHhhccc
Q 010268 441 RTTGVGVASSIGRIGGMVCPLVAVALVH---GCHQTAALILFELVILLSGISVLLFP 494 (514)
Q Consensus 441 ~~~~~g~~~~~~~~g~~~~p~i~g~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~ 494 (514)
.+..+|+.+.+..+.++++|.+.|.+.. ...|...|++.+++.+++.++..++-
T Consensus 391 a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 391 AGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEee
Confidence 9999999999999999999999999984 23577788888888887776655553
No 67
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.98 E-value=3.6e-30 Score=251.64 Aligned_cols=352 Identities=24% Similarity=0.291 Sum_probs=250.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhcC--CCcchhHHHHHH-----HHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHH
Q 010268 39 ISEAMEMMLLSFVGPAVQSLWH--LSPNQESLITSV-----VFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLS 111 (514)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~--~s~~~~g~i~s~-----~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~ 111 (514)
+.++++++.+++..+.+.+++. .++.+.+.+.+. ..++..+++++.|+++||+|||++++.+.++..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 4677888888988888888754 455666665543 333445789999999999999999999999999999999
Q ss_pred hhhhhHH--------HHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHh------
Q 010268 112 AFAPNYY--------LLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVM------ 176 (514)
Q Consensus 112 ~~~~~~~--------~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~------ 176 (514)
++++++. .+++.|+++|++.+.. +....++.|++++++|++..++...+..+|.++++.++..+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~ 162 (394)
T TIGR00883 83 GLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDD 162 (394)
T ss_pred hhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 9998865 4788999999999887 777789999999999999999999999999999998876653
Q ss_pred --cccchHHHHHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccC
Q 010268 177 --PRLGWRWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSS 254 (514)
Q Consensus 177 --~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
+.++||..|++.+++.++..+.....||+++....+++.+
T Consensus 163 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------- 204 (394)
T TIGR00883 163 ALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEKHK-------------------------------------- 204 (394)
T ss_pred HhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhccc--------------------------------------
Confidence 3578999999887776666555555666543210000000
Q ss_pred CCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010268 255 SSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTE 334 (514)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (514)
+ ....+++.++++. +.++......+.....++....+.|.
T Consensus 205 --------------------------~-------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (394)
T TIGR00883 205 --------------------------K-------------KRGPIRETLTKHR-KPFLLGLGLVIATTTTFYLITTYLPT 244 (394)
T ss_pred --------------------------c-------------ccCCHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0001222222221 22333444444555555666667777
Q ss_pred hhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHh-hh-hhc--ccCcchh
Q 010268 335 LNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFL-VP-LLF--QQPKGLT 410 (514)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~-~~-~~~--~~~~~~~ 410 (514)
+.++. .+.+....+.......+...++.++.+++.||+|||+.+..+..+..+.. .. ... ..+.+..
T Consensus 245 ~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (394)
T TIGR00883 245 YLTQT---------LGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLF 315 (394)
T ss_pred HHHHh---------cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHH
Confidence 66322 12566666777778888999999999999999999987765444333322 11 112 2334444
Q ss_pred HHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHH-HHHhHhHHHHHHHHHHhhcC-chhHHH
Q 010268 411 TGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSI-GRIGGMVCPLVAVALVHGCH-QTAALI 477 (514)
Q Consensus 411 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~-~~~g~~~~p~i~g~l~~~~g-~~~~~~ 477 (514)
....++.+++.+...+...+...|.+|++.|+++.|+.... ..+|..++|.+.|.+.|+.| +...++
T Consensus 316 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~ 384 (394)
T TIGR00883 316 FFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGY 384 (394)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHH
Confidence 55566677777778888899999999999999999985544 55888899999999999988 443333
No 68
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.98 E-value=1.3e-29 Score=246.45 Aligned_cols=360 Identities=15% Similarity=0.153 Sum_probs=235.5
Q ss_pred HHHHHHHHHHHHHHHHH-hhhhcCCCcchhHHHHHHHHH-HHHHhhhhHHhhhhhhCChHHH-HHHHHHHHHHHHHHhhh
Q 010268 38 WISEAMEMMLLSFVGPA-VQSLWHLSPNQESLITSVVFA-GMLVGAYSWGIVSDNFGRRKGF-LITAIVTSAAGLLSAFA 114 (514)
Q Consensus 38 ~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~i~s~~~~-~~~i~~~~~G~l~Dr~G~r~~l-~~~~~~~~~~~~~~~~~ 114 (514)
.++.........+.+|. +.+++|.|++++|++.+...+ +..++.+++|+ .||+||||.+ +.+.++.+++..+.+++
T Consensus 24 ~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 102 (393)
T PRK15011 24 AFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWN 102 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHh
Confidence 45555555555666655 578899999999999876655 55555555555 9999999875 45566666777788889
Q ss_pred hhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCch--hHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHH
Q 010268 115 PNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNR--GFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFP 191 (514)
Q Consensus 115 ~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~ 191 (514)
++++.+++.+.+.|...+.. +....+..++.++++| +...++.+.+.++|.+++|++++.+.+++|||..|++.++.
T Consensus 103 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~ 182 (393)
T PRK15011 103 RNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVA 182 (393)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHH
Confidence 99988766655444433344 6666777887766555 34568889999999999999999999889999999998887
Q ss_pred HHHHHHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCC
Q 010268 192 SSLLLLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDE 270 (514)
Q Consensus 192 ~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (514)
.++..+. ++++||.++. ++.+ .+ +
T Consensus 183 ~~~~~~~~~~~~~~~~~~----~~~~--~~---~---------------------------------------------- 207 (393)
T PRK15011 183 FIVCGVMVWLFLPSMRKE----LPLA--TG---T---------------------------------------------- 207 (393)
T ss_pred HHHHHHHHHhhcCccCCC----Cccc--cc---c----------------------------------------------
Confidence 7766544 4556765321 0000 00 0
Q ss_pred CchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCC
Q 010268 271 DSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSG 350 (514)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (514)
.+ ..+ .+++ ..+............++....+.|.+.++. .+
T Consensus 208 --~~-----------------------~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~---------~~ 248 (393)
T PRK15011 208 --LE-----------------------APR--RNRR---DTLLLFVICTLMWGTNSLYIINMPLFIINE---------LH 248 (393)
T ss_pred --cc-----------------------ccc--cccc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------cC
Confidence 00 000 0000 001111111122223333344566554321 12
Q ss_pred CcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceee
Q 010268 351 KSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYV 430 (514)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 430 (514)
.+....+.......++.+++.++.|+++||++||+.+..+.....+.+..+...++.+......++.+++.+...+....
T Consensus 249 ~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~ 328 (393)
T PRK15011 249 LPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGML 328 (393)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56656666666667778889999999999999998877666555544444333444444444444444444444455556
Q ss_pred ccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcc
Q 010268 431 YAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLF 493 (514)
Q Consensus 431 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 493 (514)
+..|..|+ .++++.++.+...++|..++|.+.|.+.|..|+...+.+.+++.+++.+..+..
T Consensus 329 ~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 329 YFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 67888885 599999999999999999999999999999888877777666666655554433
No 69
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.98 E-value=6.7e-30 Score=257.80 Aligned_cols=394 Identities=32% Similarity=0.497 Sum_probs=299.7
Q ss_pred hhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccch-
Q 010268 56 QSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCLVGLGLGGG- 134 (514)
Q Consensus 56 ~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~- 134 (514)
.+.+..+.....+..+++.+|..++++++|+++||+|||++++.++++..++.++.++++|++.+++.|++.|++.+..
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchh
Confidence 3556778888999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHHHHccCChhhhhccCC
Q 010268 135 PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGR 214 (514)
Q Consensus 135 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 214 (514)
.+...++.|++++++|+.+..+ ......+..++++.++++.. +||+.+++..++.++.++.+++.||+|+|+..+++
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~ 266 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGR 266 (521)
T ss_pred HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCc
Confidence 7777899999999999999999 77777777888888888776 89999999999999888877777899999999999
Q ss_pred chHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccc
Q 010268 215 TAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMG 294 (514)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (514)
.+++.+.+++..+.|+.....+.. .+. .. ...+++. ....
T Consensus 267 ~~~a~~~l~~~a~~n~~~~~~~~~-------~~~--------------------~~-~~~~~~~------------~~~~ 306 (521)
T KOG0255|consen 267 IDEAIKILKKIAKLNGRKLSVKEL-------LRL--------------------EL-LLRPLKL------------LFTE 306 (521)
T ss_pred hHHHHHHHHHHHhhcCCCCCcHHH-------HHH--------------------HH-HhhHhhh------------hccC
Confidence 999998888877655221110000 000 00 0000000 0000
Q ss_pred hhhHHHHhhChh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHH
Q 010268 295 GITALLILLSPE-LIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLL 373 (514)
Q Consensus 295 ~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 373 (514)
+...+.++++.+ .++..+...+.++.....+++.......+.. .......+.+.....+...
T Consensus 307 ~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~~lg~-----------------~~~~~~~~~~~~~~p~~~~ 369 (521)
T KOG0255|consen 307 PKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVSGLGG-----------------NIYLNFTLSGLVELPAYFR 369 (521)
T ss_pred CCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhhhcCc-----------------hHHHHHHHHHHHHhhHHHH
Confidence 111355555544 6777777777777778888887666554321 1134444555577888888
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcc---hhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHH
Q 010268 374 AAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKG---LTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASS 450 (514)
Q Consensus 374 ~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~ 450 (514)
.+...|++|||.....+..+..++++...+..... .......+..++.+..+...+.+..|++|+..|..+.|..+.
T Consensus 370 ~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~ 449 (521)
T KOG0255|consen 370 NGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISA 449 (521)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 89999999999999999999988888777554332 355555666666667777779999999999999999999999
Q ss_pred HHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcccccccCcCCCCCCCCCC
Q 010268 451 IGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFPFETTGRGLSDSLPSSK 510 (514)
Q Consensus 451 ~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (514)
...++++++|.+...... ......+.+++....+.+++...+.||++++.+.+..++.+
T Consensus 450 ~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~~~ 508 (521)
T KOG0255|consen 450 AARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLLDAE 508 (521)
T ss_pred HHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHHHH
Confidence 999999999998865544 33333333456677777777767889999988766554433
No 70
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=7e-29 Score=242.03 Aligned_cols=350 Identities=15% Similarity=0.087 Sum_probs=247.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHH
Q 010268 27 QLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSA 106 (514)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~ 106 (514)
.++.+....+..+...+......+..|.+.+++|.|+.+.+++.+.+.++..++++++|+++||+|||+.+.++..+..+
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~ 85 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFIL 85 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 34444555555556667777888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHH
Q 010268 107 AGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLL 185 (514)
Q Consensus 107 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f 185 (514)
+.++..++++++.+++.|++.|++.+.. +....+..|.+++++|+++.++...+..+|..++|.+++.+.+..|||..|
T Consensus 86 ~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f 165 (394)
T PRK11652 86 GTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACY 165 (394)
T ss_pred HHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHH
Confidence 9999999999999999999999998876 555677889999999999999999999999999999999999889999999
Q ss_pred HHhHHHHHHHHH-HHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCcc
Q 010268 186 GLSAFPSSLLLL-LYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPK 264 (514)
Q Consensus 186 ~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (514)
++.++..++..+ ..++.||+++.. +++++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---------------------------------------------- 196 (394)
T PRK11652 166 LFLLLLGAGVTFSMARWMPETRPAD---ARRTRV---------------------------------------------- 196 (394)
T ss_pred HHHHHHHHHHHHHHHHhCCccCccc---cchhHH----------------------------------------------
Confidence 998777665543 355567653210 000000
Q ss_pred ccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccc
Q 010268 265 EMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVS 344 (514)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (514)
...++..++++..+..+......+. .......+.+.+.++.
T Consensus 197 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~----- 237 (394)
T PRK11652 197 -------------------------------LASYRTLLSNRRFNCYLLMLIGTLA---GIAVFEACSGVLMGAV----- 237 (394)
T ss_pred -------------------------------HHHHHHHHcChHHHHHHHHHHHHHH---HHHHHHHhChHHHHHH-----
Confidence 0033334443333322222221111 1111111222222211
Q ss_pred ccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHH-HHHHHHhhhhhc--ccCcchhHHHHHHHHhhh
Q 010268 345 NELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMF-FCCCIFLVPLLF--QQPKGLTTGLLFGARICI 421 (514)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~ 421 (514)
.+.+....+.......++.+++..+.+++.||.+++....... .+..+....... ..+.+......++.+++.
T Consensus 238 ----~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 313 (394)
T PRK11652 238 ----LGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGA 313 (394)
T ss_pred ----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence 1255555566666667777888888888888887443332222 222222222111 223344555567777788
Q ss_pred cccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhh
Q 010268 422 TVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHG 469 (514)
Q Consensus 422 ~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~ 469 (514)
+...+...+...|..| +.++++.++.+....+|..+++.+.|.+.+.
T Consensus 314 ~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 314 GMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 8888888888888887 5789999999999999999999999987654
No 71
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=2.9e-29 Score=243.51 Aligned_cols=332 Identities=16% Similarity=0.167 Sum_probs=233.9
Q ss_pred HHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Q 010268 44 EMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFF 123 (514)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 123 (514)
....+.+..|.+.+++|+|+.+.+++.+++.++..++++++|+++||+|||+++..+.++.+++.+++.++++++.+++.
T Consensus 6 ~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 85 (377)
T PRK11102 6 AIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYM 85 (377)
T ss_pred HHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 34566788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHH-HHH
Q 010268 124 RCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLL-YSV 201 (514)
Q Consensus 124 r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~-~~~ 201 (514)
|++.|++.+.. +...+++.|++++++|++++++.+....+|..++|.+++.+.+..+||..|++.+++.++..+. .++
T Consensus 86 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (377)
T PRK11102 86 RFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFF 165 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHh
Confidence 99999998887 6677899999999999999999999999999999999999999899999999888777766444 455
Q ss_pred ccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhcc
Q 010268 202 TPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKS 281 (514)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (514)
+||+++.. ++++.+.++
T Consensus 166 ~~~~~~~~--~~~~~~~~~------------------------------------------------------------- 182 (377)
T PRK11102 166 IPETLPKE--RRQPFHLRT------------------------------------------------------------- 182 (377)
T ss_pred CCccCccc--ccCCCChHH-------------------------------------------------------------
Confidence 66643210 000000000
Q ss_pred CCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchh
Q 010268 282 EDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVF 361 (514)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (514)
..+.++..++++... ...+..+......+....+.|.+..+. .+.++...+....
T Consensus 183 -------------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~g~s~~~~g~~~~ 237 (377)
T PRK11102 183 -------------TIRNFASLFRHKRVL---GYMLASGFSFAGMFSFLTAGPFVYIEL---------NGVSPQNFGYYFA 237 (377)
T ss_pred -------------HHHHHHHHHcChHHH---HHHHHHHHHHHHHHHHHHcCHHHHHHH---------hCCCHHHHHHHHH
Confidence 001233334332222 222222222222233333333333221 2366777788888
Q ss_pred hhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhh---cc-cCcchhHHHHHHHHhhhcccccceeeccccccC
Q 010268 362 ITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLL---FQ-QPKGLTTGLLFGARICITVTFTVVYVYAPEIYP 437 (514)
Q Consensus 362 ~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p 437 (514)
...++.++++++.+++.||+|+|+.+..+..+..+..+.+. .. .+.+...+...+.+.+.+...+.......|..|
T Consensus 238 ~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (377)
T PRK11102 238 LNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP 317 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc
Confidence 88999999999999999999999988877765443322221 11 222333333333333334444445556677766
Q ss_pred cchhhHHHHHHHHHHH-HhHhHHHHHHH
Q 010268 438 TSVRTTGVGVASSIGR-IGGMVCPLVAV 464 (514)
Q Consensus 438 ~~~~~~~~g~~~~~~~-~g~~~~p~i~g 464 (514)
+.++++.++.+.... +|..+++.+.+
T Consensus 318 -~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 318 -HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred -ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 788999998877654 66666666544
No 72
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.97 E-value=2.5e-31 Score=243.87 Aligned_cols=368 Identities=18% Similarity=0.192 Sum_probs=257.2
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHH
Q 010268 24 GKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIV 103 (514)
Q Consensus 24 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~ 103 (514)
.+..++.++++++...++.++++.+..+.+.+.+.+|++++..|++.+.+.+.+.+++|+.|+++|||+||+++.+|..+
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~i 107 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFI 107 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHH
Confidence 34556778888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccc-h
Q 010268 104 TSAAGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLG-W 181 (514)
Q Consensus 104 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~g-w 181 (514)
+.++.++.+++.++|+++++|.+.|+|.+.. +++.++++|.++..+|++++++++.+..+|..+|.+.+..+.+..+ |
T Consensus 108 W~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~W 187 (493)
T KOG1330|consen 108 WTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWW 187 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccce
Confidence 9999999999999999999999999999998 8889999999999999999999999999999999999988877655 9
Q ss_pred HHHHHHhHHHHHHHHHHHHH-ccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCC
Q 010268 182 RWLLGLSAFPSSLLLLLYSV-TPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDD 260 (514)
Q Consensus 182 ~~~f~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (514)
|+.|+..++++++..++.++ .+|+++ +..++... ++.
T Consensus 188 r~af~~~avl~vi~~~L~~~f~~eP~r-----ga~~~~~~-------------------------------------~~~ 225 (493)
T KOG1330|consen 188 RWAFRGSAVLGVIVGLLVFLFVREPER-----GARDEVDG-------------------------------------ENK 225 (493)
T ss_pred EEEEEeehHHHHHHHHHHHhhccCccc-----cccccccc-------------------------------------CCc
Confidence 99999999999998777555 444322 11000000 000
Q ss_pred CCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 010268 261 TTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLS-PELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQ 339 (514)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (514)
. . +..-+.++.++.+.+ +......+.+....+ ..-++..|.|.+....
T Consensus 226 ~-----------------~----------~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~f----v~Gs~sww~p~~~~~~ 274 (493)
T KOG1330|consen 226 M-----------------V----------KPFTSVWKDLKVLAKIKVFVLSSLGIIAAQF----VIGSLSWWAPAFIYYS 274 (493)
T ss_pred C-----------------C----------CCccchHHHHHHHHccCceeeehHHHHHHHH----hccccchhhhhHHHHH
Confidence 0 0 000011123333333 211112222222222 2222222333222100
Q ss_pred cccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhH----HHHHH-------HHHHHHHHhhhhhc-ccCc
Q 010268 340 NKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRK----LSMSS-------MFFCCCIFLVPLLF-QQPK 407 (514)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~----~~~~~-------~~~~~~~~~~~~~~-~~~~ 407 (514)
. .-.+++.....++..+...++.+|.+++|.++||+.|+ ....+ +...++..+.+... ....
T Consensus 275 ~------~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s 348 (493)
T KOG1330|consen 275 Y------ELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSS 348 (493)
T ss_pred H------HHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHH
Confidence 0 00124555667888889999999999999999996432 11111 11222222222222 2222
Q ss_pred chhHHHHHHHHhhhcc-cccceeeccccccCcchhhHHHHHHHHHHH-HhHhHHHHHHHHHHhhc
Q 010268 408 GLTTGLLFGARICITV-TFTVVYVYAPEIYPTSVRTTGVGVASSIGR-IGGMVCPLVAVALVHGC 470 (514)
Q Consensus 408 ~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~~~p~i~g~l~~~~ 470 (514)
....+.+++.|..... ..+....+..|.+|++.|.+++++-..+.. +|.+-+|.+.|.+.|+.
T Consensus 349 ~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l 413 (493)
T KOG1330|consen 349 MIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKL 413 (493)
T ss_pred HHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHh
Confidence 2233334444444333 334555677899999999999999998876 66777787999999865
No 73
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.97 E-value=3.4e-29 Score=242.70 Aligned_cols=354 Identities=11% Similarity=-0.009 Sum_probs=249.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCCh----HHHHHHHHHHHHHHHHHhh
Q 010268 38 WISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRR----KGFLITAIVTSAAGLLSAF 113 (514)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r----~~l~~~~~~~~~~~~~~~~ 113 (514)
++........+.+++|.+.+++|.|..++|++.+++.++..++++++|+++||+||| +.+.++..+. .......
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~ 90 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFG 90 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHh
Confidence 455556667888899999999999999999999999999999999999999999994 3333222221 2233344
Q ss_pred hhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHH
Q 010268 114 APNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPS 192 (514)
Q Consensus 114 ~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~ 192 (514)
.++++.+++.|++.|++.+.. +...++..++ .++|+++.+......++|.++||++++++.+++|||..|++.++..
T Consensus 91 ~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~ 168 (382)
T PRK11128 91 AHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGV 168 (382)
T ss_pred cccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHH
Confidence 578999999999999988877 7666666665 4568888999999999999999999999999999999998877655
Q ss_pred HHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCc
Q 010268 193 SLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDS 272 (514)
Q Consensus 193 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (514)
++..+..++.||.++ ++++++.
T Consensus 169 ~~~~~~~~~~~~~~~----~~~~~~~------------------------------------------------------ 190 (382)
T PRK11128 169 ASMLLGQLLRPTIMP----QGESRQQ------------------------------------------------------ 190 (382)
T ss_pred HHHHHHHHccCCCCC----ccccccc------------------------------------------------------
Confidence 544444443443211 0000000
Q ss_pred hhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCc
Q 010268 273 ISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKS 352 (514)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (514)
.+ +....++++++++....... ..+.....+.....+.+.+..+.+ .+
T Consensus 191 ------~~-------------~~~~~~~~i~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~g----------~s 238 (382)
T PRK11128 191 ------ES-------------AGWPAWKALLKEPTVWRFLL---CVSLLQGSHAAYYGFSAIYWQAAG----------YS 238 (382)
T ss_pred ------cc-------------cccchHHHHHcChhHHHHHH---HHHHHHHHhHhHHHHHHHHHHHCC----------CC
Confidence 00 00014455555433222222 222222223333334444443333 66
Q ss_pred ccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeecc
Q 010268 353 RDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYA 432 (514)
Q Consensus 353 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 432 (514)
....+....+..++.+++.++.+++.||+++|+.+..+.++.++..+.+...++.+...+..++.|++.+...+....+.
T Consensus 239 ~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~ 318 (382)
T PRK11128 239 ASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYI 318 (382)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66667777788888999999999999999999999888888888777776677777777778888888887777777777
Q ss_pred ccccCcchhhHHHHHHHHH-HHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHH
Q 010268 433 PEIYPTSVRTTGVGVASSI-GRIGGMVCPLVAVALVHGCHQTAALILFELVILLSG 487 (514)
Q Consensus 433 ~~~~p~~~~~~~~g~~~~~-~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~ 487 (514)
.+. +++++++..++.+.. ..+|..++|.+.|.+.|..|. ..++..+++.+++.
T Consensus 319 ~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 319 AAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 776 455678889988744 457789999999999999886 35555555554443
No 74
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.97 E-value=1.6e-29 Score=248.37 Aligned_cols=379 Identities=15% Similarity=0.045 Sum_probs=240.0
Q ss_pred HHHHHHHHHHHHHHHHHHHh-hhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHh--
Q 010268 36 MGWISEAMEMMLLSFVGPAV-QSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSA-- 112 (514)
Q Consensus 36 l~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~-- 112 (514)
+.+++.........++.|.+ .+++|+|+.++|++.+++.++..++++++|+++||+|||++++++..+.+++.....
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 96 (420)
T PRK09528 17 LFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIY 96 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH
Confidence 34444555445555666554 555999999999999999999999999999999999999999887666554433221
Q ss_pred -hhhh-----HHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHH
Q 010268 113 -FAPN-----YYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLL 185 (514)
Q Consensus 113 -~~~~-----~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f 185 (514)
.++. ....++.+++.|.+.... +....+. +.. .++++..+|......++|..++|++++.+.+ .+|+..|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f 173 (420)
T PRK09528 97 VFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYI-ERV-SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINF 173 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHH-HHH-HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhH
Confidence 1111 111222333334333222 2222333 222 3457778899999999999999999998876 5899999
Q ss_pred HHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccc
Q 010268 186 GLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKE 265 (514)
Q Consensus 186 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (514)
++.+++.++.+++.++.+++++.... .++++ + +
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~---------~------------------------------------ 206 (420)
T PRK09528 174 WLGSGSALILLVLLFFAKPDAPSTAK-VANAL-G---------A------------------------------------ 206 (420)
T ss_pred HHHHHHHHHHHHHHhcccccccchhh-hccch-h---------c------------------------------------
Confidence 99888777766665554332210000 00000 0 0
Q ss_pred cccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccc
Q 010268 266 MARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSN 345 (514)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (514)
++ .+...+..+..++++..+...+. .++....+.....+.|.+..+..
T Consensus 207 ---~~---------------------~~~~~~~~~~~l~~~~~~~l~l~---~~~~~~~~~~~~~~~~~~~~~~~----- 254 (420)
T PRK09528 207 ---NA---------------------SAVSLKDALALLKLPKFWFLVLY---VIGVACFYDVFDQQFPNFFASFF----- 254 (420)
T ss_pred ---cc---------------------ccccHHHHHHHccCCCeEeehHH---HHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 00 00000122233333322221111 11111122222222333221110
Q ss_pred cccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccc
Q 010268 346 ELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTF 425 (514)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 425 (514)
.+.+.+....+...++..+...++.++.|++.||+|+|+.+..+.++.++..+++.+.++.+.......+.+++.+...
T Consensus 255 -~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~ 333 (420)
T PRK09528 255 -ATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLL 333 (420)
T ss_pred -hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 0112333445677777788888999999999999999999888888888777777766677666666666776666666
Q ss_pred cceeeccccccCcchhhHHHHH-HHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcccccc
Q 010268 426 TVVYVYAPEIYPTSVRTTGVGV-ASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFPFET 497 (514)
Q Consensus 426 ~~~~~~~~~~~p~~~~~~~~g~-~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (514)
+....++.|.+|++.+++..+. .+....+|.+++|.+.|.+.|..|+...+...+++.++..++..+..+++
T Consensus 334 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 334 VGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 6667788899999999888766 56778899999999999999999998888888888777666665554443
No 75
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.97 E-value=2e-28 Score=239.01 Aligned_cols=365 Identities=16% Similarity=0.074 Sum_probs=251.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhh-----CChH-HHHHHHHHHHHHH
Q 010268 35 GMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNF-----GRRK-GFLITAIVTSAAG 108 (514)
Q Consensus 35 ~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~-----G~r~-~l~~~~~~~~~~~ 108 (514)
+..++.++.........+|.+.++.|+|.+++|++..+... .+.++++|+++||+ |||| .++++.++.+++.
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~ 82 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASI 82 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHH
Confidence 44567888888888999999999999999999999777765 69999999999999 8875 6888888888887
Q ss_pred HHHhhh---hhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcc-cchHH
Q 010268 109 LLSAFA---PNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPR-LGWRW 183 (514)
Q Consensus 109 ~~~~~~---~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~-~gw~~ 183 (514)
.++.+. .+++.+++..++.++..+.. +...+++.|+.|+++|+++.++...+.++|.++++.++..+.+. +|||.
T Consensus 83 ~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~ 162 (402)
T PRK11902 83 AAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGN 162 (402)
T ss_pred HHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHH
Confidence 777776 35777888888888777777 77779999999999999999999999999999999999998885 59999
Q ss_pred HHHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCc
Q 010268 184 LLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTP 263 (514)
Q Consensus 184 ~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (514)
.|++.++..++..+..++.||+++.. ++.++..+ +
T Consensus 163 ~f~i~a~~~l~~~l~~~~~~e~~~~~---~~~~~~~~---~--------------------------------------- 197 (402)
T PRK11902 163 TYLLMAGLMLAGALTTLWAPEPEVPA---RPPRSLGE---A--------------------------------------- 197 (402)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcccc---cccchhHH---H---------------------------------------
Confidence 99998887776666566677654210 00000000 0
Q ss_pred cccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccc
Q 010268 264 KEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCV 343 (514)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (514)
....++.+++++..+..+.............+ ....+.+.++.
T Consensus 198 -------------------------------~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~--~~~~~~l~~~~---- 240 (402)
T PRK11902 198 -------------------------------VVGPLRDFFSRRGAWALLLLIVLYKLGDAFAG--SLSTTFLIRGA---- 240 (402)
T ss_pred -------------------------------HHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHH--HHHHHHHHHhc----
Confidence 00144455555544443333222221111111 11222232222
Q ss_pred cccccCCCcccCcccchhhh-hhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhh---hcc-cCcchhHHHHH---
Q 010268 344 SNELQSGKSRDINYGDVFIT-SFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPL---LFQ-QPKGLTTGLLF--- 415 (514)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~--- 415 (514)
+.+++..+...... .++.+++.++++++.||+++|+.+..+..+..+..+.+ ... ++.+......+
T Consensus 241 ------G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 314 (402)
T PRK11902 241 ------GFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIEN 314 (402)
T ss_pred ------CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 36666666665443 34688999999999999999988776666555443322 232 23343333332
Q ss_pred -HHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcc
Q 010268 416 -GARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLF 493 (514)
Q Consensus 416 -~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 493 (514)
..++..+...+....++.+.+|.+. .++.+.+..++...++.+.|.+.|..|+...|.+.+++++++.++.+..
T Consensus 315 ~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~ 389 (402)
T PRK11902 315 LCGGMGTAAFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLM 389 (402)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455556667777777777544 4555556667777677789999999999888888887777776665443
No 76
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.97 E-value=5.7e-29 Score=242.77 Aligned_cols=379 Identities=12% Similarity=0.030 Sum_probs=248.8
Q ss_pred HHHHHHHHHHHHH-HHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCC-hHHHHHHHHHHHHHHHHHhh
Q 010268 36 MGWISEAMEMMLL-SFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGR-RKGFLITAIVTSAAGLLSAF 113 (514)
Q Consensus 36 l~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~-r~~l~~~~~~~~~~~~~~~~ 113 (514)
+.+++.+.....+ +++.+.+.+++|+|..++|++.+++.++..++++++|+++||+|| |+++.++.++..++..+..+
T Consensus 9 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~ 88 (418)
T TIGR00889 9 FMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQ 88 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 3345555555555 555666778899999999999999999999999999999999965 77888888888888888888
Q ss_pred hhhHHHHHHHHHHHhhhccch-hhHHHHHH--------hhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHH
Q 010268 114 APNYYLLLFFRCLVGLGLGGG-PVLASWFL--------EFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWL 184 (514)
Q Consensus 114 ~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~ 184 (514)
.++++.+++.|++.|++.+.. +...++.. |......|.+.+| .+|.+++|.+++.+....+|+ .
T Consensus 89 ~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~ 161 (418)
T TIGR00889 89 VTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-Q 161 (418)
T ss_pred hcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-H
Confidence 899999999999999987665 54444322 2122223444444 478889999888874333354 4
Q ss_pred HHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCcc
Q 010268 185 LGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPK 264 (514)
Q Consensus 185 f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (514)
|++.++..++..+..+++||+|+.. +++....++.
T Consensus 162 f~~~~~~~~~~~~~~~~~~e~~~~~--~~~~~~~~~~------------------------------------------- 196 (418)
T TIGR00889 162 LYITAGSSALLGVFALTLPDIPVAK--STAKMSIKVM------------------------------------------- 196 (418)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCc--cccccCHHHH-------------------------------------------
Confidence 5565655555555566777764210 0000000000
Q ss_pred ccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccc
Q 010268 265 EMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVS 344 (514)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (514)
.....+.+++++....+.. ..++..........+.+.+.++.+. .
T Consensus 197 ------------------------------~~~~~~~~~k~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~--~ 241 (418)
T TIGR00889 197 ------------------------------LGLDAFILFKNKRMAIFFF---FSMLLGAPLQITNIFGNGFLHEFGR--N 241 (418)
T ss_pred ------------------------------hhhhHHHHhcCCCeeeHHH---HHHHHHhHHHHHHHhHHHHHHHhcc--c
Confidence 0001222333322111222 1222222222222333433322210 0
Q ss_pred ccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccC-c---chhHHHHHHHHhh
Q 010268 345 NELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQP-K---GLTTGLLFGARIC 420 (514)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~g~~ 420 (514)
.....+......+...++..+..+++.++.+++.||+|+|+++..+.++.++....+....+ . +...+..++.+++
T Consensus 242 ~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~ 321 (418)
T TIGR00889 242 PEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCA 321 (418)
T ss_pred ccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHH
Confidence 00000122344577788888899999999999999999999999999888877655554321 1 2334456677777
Q ss_pred hcccccceeeccccccCcchhhHHHHHHH-HHHHHhHhHHHHHHHHHHhhc------CchhHHHHHHHHHHHHHHHhhcc
Q 010268 421 ITVTFTVVYVYAPEIYPTSVRTTGVGVAS-SIGRIGGMVCPLVAVALVHGC------HQTAALILFELVILLSGISVLLF 493 (514)
Q Consensus 421 ~~~~~~~~~~~~~~~~p~~~~~~~~g~~~-~~~~~g~~~~p~i~g~l~~~~------g~~~~~~~~~~~~~~~~~~~~~~ 493 (514)
.+...+....++.|.+|++.|++++|+.+ ....+|.++||.+.|.+.|+. ||...+.+.+++.++++++.+++
T Consensus 322 ~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~ 401 (418)
T TIGR00889 322 FDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIF 401 (418)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 77777788888999999999999999997 567899999999999999985 45667777877777777777777
Q ss_pred cccccCcC
Q 010268 494 PFETTGRG 501 (514)
Q Consensus 494 ~~~~~~~~ 501 (514)
.+|+++.-
T Consensus 402 ~~~~~~~~ 409 (418)
T TIGR00889 402 FKYSHNAI 409 (418)
T ss_pred hCCcccCC
Confidence 77665543
No 77
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.97 E-value=2.2e-30 Score=253.50 Aligned_cols=429 Identities=17% Similarity=0.106 Sum_probs=314.8
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHH
Q 010268 22 GFGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITA 101 (514)
Q Consensus 22 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~ 101 (514)
+.+.+.|.+++..++..+........++.+.+.+.++++.+..+++|+.++......+..|+.+.+.||+|.|.+.+.|.
T Consensus 39 PdGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~ 118 (509)
T KOG2504|consen 39 PDGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGG 118 (509)
T ss_pred CCCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHH
Confidence 36778999999998998888888888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHHHH-HHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 010268 102 IVTSAAGLLSAFAPNYYLLLFF-RCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRL 179 (514)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~l~~~-r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~ 179 (514)
++.++|.++.+|++++|++++. -++.|+|.|+. .+....+. .+++++|+.+.|+..++.++|.++-|.+..++.+.+
T Consensus 119 ~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~-~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~ 197 (509)
T KOG2504|consen 119 LVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILG-TYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKY 197 (509)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhh-hHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHh
Confidence 9999999999999999887774 68999999998 44445555 455789999999999999999999999999999999
Q ss_pred chHHHHHHhHHHHHHHHHHHHHccC-ChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCC
Q 010268 180 GWRWLLGLSAFPSSLLLLLYSVTPE-SPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNE 258 (514)
Q Consensus 180 gw~~~f~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (514)
|||..+++.+.+.+-..+....+.+ .+... +. .. ++... ... +.+..+.+...+....
T Consensus 198 G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~---~~---~~---~~~~~---~~~---------~~~~~~~~~~~~~~~~ 256 (509)
T KOG2504|consen 198 GWRGALLIFGGISLNVLVAGALLRPLSPPKK---PN---EE---KDLRN---SAA---------SVESTPKPVELRISER 256 (509)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHcCCCCcCCC---ch---hh---hhhcc---ccc---------cccccccccccccccC
Confidence 9999999988888666555444433 32211 01 00 00000 000 0000000000000011
Q ss_pred CCCCccccccCCCchhHhhhhccCCccccccccccchhhH--HHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010268 259 DDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITA--LLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELN 336 (514)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (514)
+..+... ...+.+..++.+++.+ ....+ .... -.++++. +.++.......+..+.++....++|.+.
T Consensus 257 ~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~-~~~~~~d~~ll~~---~~fl~~~~~~~~~~~g~~~p~~~l~~~~ 325 (509)
T KOG2504|consen 257 DSGLKKL-SLSNLATLKRGPDKWR------NSPLQ-AFLSMLDLSLLKD---PKFLLLALSNLFAYLGFNVPFVYLPSYA 325 (509)
T ss_pred CCCCCcc-cccchhhhhhCCcccc------ccchh-hhhhhhhHHHHcC---chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111110 0000000000000000 00000 0001 1234444 4555566666677777778888888888
Q ss_pred cCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHh--hHHHHHHHHHHHHHHhhhhhcccCcchhHHHH
Q 010268 337 NGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLG--RKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLL 414 (514)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (514)
...+ .+...+....++.++..++++++.|++.|+.. ++.+..++.+..+++.+.+.+..+.+.++...
T Consensus 326 ~~~g----------~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~ 395 (509)
T KOG2504|consen 326 KSLG----------LSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFS 395 (509)
T ss_pred hhcC----------CChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 6554 88888899999999999999999999999987 55677788888888887778888888899999
Q ss_pred HHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcC-chhHHHHHHHHHHHHHHHhhcc
Q 010268 415 FGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCH-QTAALILFELVILLSGISVLLF 493 (514)
Q Consensus 415 ~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 493 (514)
.++|++.+........++.|+++.+....++|+...+..++..+||.+.|.+.|..| +...+...++..++++.+.++.
T Consensus 396 ~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~ 475 (509)
T KOG2504|consen 396 ILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLIL 475 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHh
Confidence 999999999988888899999999999999999999999999999999999999988 5555666666666666554443
No 78
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.97 E-value=2.8e-28 Score=239.86 Aligned_cols=374 Identities=16% Similarity=0.106 Sum_probs=289.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHH
Q 010268 32 AYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLS 111 (514)
Q Consensus 32 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~ 111 (514)
-.++++.+...++..+.....+.+..++.-|+..++++..+..+...+.++++|.++||++||++++.+.++.++..++.
T Consensus 13 r~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L 92 (524)
T PF05977_consen 13 RRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLL 92 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHH
Confidence 33455566666666677777788888888899999999999999999999999999999999999999988877665544
Q ss_pred hhh-----hhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHH
Q 010268 112 AFA-----PNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLL 185 (514)
Q Consensus 112 ~~~-----~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f 185 (514)
++. .+.+.+++.-++.|++.+.. |+-.+++.+..|+++...++++.+...++..++||.++|.+...+|-..+|
T Consensus 93 ~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f 172 (524)
T PF05977_consen 93 AVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAF 172 (524)
T ss_pred HHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 432 36888999999999999998 788899999999999999999999999999999999999999888999999
Q ss_pred HHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccc
Q 010268 186 GLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKE 265 (514)
Q Consensus 186 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (514)
.+.++..++.++.+...+.+++ +++ ...++..+.+
T Consensus 173 ~inalsfl~~i~~l~~~~~~~~----~~~-~~~e~~~~~l---------------------------------------- 207 (524)
T PF05977_consen 173 LINALSFLISILALLRWKPPPP----PSS-LPRERFFSAL---------------------------------------- 207 (524)
T ss_pred HHHHHHHHHHHHHHHHcccccc----ccc-cchhhhhhhH----------------------------------------
Confidence 9888776666555544433211 000 0000111111
Q ss_pred cccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccc
Q 010268 266 MARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSN 345 (514)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (514)
...++.+.+++..+..+.....+...... ....+|.+.++.
T Consensus 208 ------------------------------~~G~ryv~~~~~l~~~l~~~~~~~l~~~a---~~aLlPl~a~~~------ 248 (524)
T PF05977_consen 208 ------------------------------REGLRYVRSSPPLRSVLLRSFLFNLFASA---VWALLPLFARDV------ 248 (524)
T ss_pred ------------------------------HHHHHHHhcchHHHHHHHHHHHHHHhhhH---HHHhhhHHHHHH------
Confidence 01555566555555544433333222222 223456554332
Q ss_pred cccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccc
Q 010268 346 ELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTF 425 (514)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 425 (514)
.+.++...+++.+..+++.++|.++.+++.+|+++++.+..+.++.+++++.+.+..+.+...+..++.|++.....
T Consensus 249 ---l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~ 325 (524)
T PF05977_consen 249 ---LGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIAN 325 (524)
T ss_pred ---hCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 12556666889999999999999999999999999888888888888888888888888888888889999988888
Q ss_pred cceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhc
Q 010268 426 TVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLL 492 (514)
Q Consensus 426 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 492 (514)
....+..++..|++.||++++++.+....+..+|.++.|.+.+..|....+.+.++..+++.++...
T Consensus 326 ~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~ 392 (524)
T PF05977_consen 326 SSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALR 392 (524)
T ss_pred HHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 8888999999999999999999999999999999999999999999888877766665555555443
No 79
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.97 E-value=2.2e-29 Score=241.96 Aligned_cols=331 Identities=18% Similarity=0.149 Sum_probs=243.4
Q ss_pred HHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 010268 46 MLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRC 125 (514)
Q Consensus 46 ~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 125 (514)
...++++|.+.+++|.|.++.|++.+++.++..+++++.|+++||+|||+++.++.++..++.+.. .+++++.+++.|+
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~ 95 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTA 95 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHH
Confidence 566889999999999999999999999999999999999999999999999999998888888777 7788999999999
Q ss_pred HHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhccc--chHHHHHHhHHHHHHHHHHHHHc
Q 010268 126 LVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRL--GWRWLLGLSAFPSSLLLLLYSVT 202 (514)
Q Consensus 126 l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~--gw~~~f~~~~~~~~i~~~~~~~~ 202 (514)
+.|++.+.. .....++.|+++ ++|++++++.+.+.++|..+++.+++.+.+.. +||..|...++..++... .++
T Consensus 96 ~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~--~~~ 172 (355)
T TIGR00896 96 LIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL--AWI 172 (355)
T ss_pred HHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH--HHh
Confidence 999998886 555567778775 68999999999999999999999998887654 399998876655443322 233
Q ss_pred cCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccC
Q 010268 203 PESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSE 282 (514)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (514)
|+.++ +.+++ . + ...
T Consensus 173 ~~~~~----~~~~~--------------~---------------------------------------~-------~~~- 187 (355)
T TIGR00896 173 PQVRR----RVAAN--------------Q---------------------------------------T-------TTR- 187 (355)
T ss_pred hhhcc----ccCCC--------------C---------------------------------------C-------CCC-
Confidence 43211 00000 0 0 000
Q ss_pred CccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhh
Q 010268 283 DSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFI 362 (514)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (514)
...+.+++++ ..+......+.....++....|.|.+.++.+ .+....+...+.
T Consensus 188 --------------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g----------~~~~~~g~~~~~ 240 (355)
T TIGR00896 188 --------------LTPVRIWRSP---LAWQVTVFFGLQSGLYYSLIGWLPAILISHG----------ASAATAGSLLAL 240 (355)
T ss_pred --------------CCCchhhcCH---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC----------CCHHHHHHHHHH
Confidence 0111122222 2222233334445556666677787775443 777777888889
Q ss_pred hhhchhhHHHHHHHHHHHH-hhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeecccccc-Ccch
Q 010268 363 TSFAEFPGLLLAAAMVDRL-GRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIY-PTSV 440 (514)
Q Consensus 363 ~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-p~~~ 440 (514)
..++.++++++.|++.||+ +||+.+..+..+.+++.+.+.+..+.... ....+.|++.+..++...+...+.. +++.
T Consensus 241 ~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~ 319 (355)
T TIGR00896 241 MQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQ 319 (355)
T ss_pred HHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHH
Confidence 9999999999999999999 56666666666666665555543332222 2456678888888877666665544 4567
Q ss_pred hhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCch
Q 010268 441 RTTGVGVASSIGRIGGMVCPLVAVALVHGCHQT 473 (514)
Q Consensus 441 ~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~ 473 (514)
+++..|+.+.+.+++..++|.+.|.+.|+.|.+
T Consensus 320 ~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~ 352 (355)
T TIGR00896 320 AAALSAMAQSIGYLLAALGPLFVGVLHDISGNW 352 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 799999999999999999999999999988754
No 80
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.97 E-value=6.4e-29 Score=240.16 Aligned_cols=343 Identities=17% Similarity=0.206 Sum_probs=238.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-hhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHH
Q 010268 33 YAGMGWISEAMEMMLLSFVGPA-VQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLS 111 (514)
Q Consensus 33 ~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~ 111 (514)
..+++++........++++.|. +.+++|+|+.+.+++.+++.+++.++++++|+++||+|||+.++++.++..++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~ 84 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWA 84 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 4556667778888889999995 889999999999999999999999999999999999999999999999999999999
Q ss_pred hhhh-hHHHHHHHHHHHhhhccchhhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc----------ccc
Q 010268 112 AFAP-NYYLLLFFRCLVGLGLGGGPVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMP----------RLG 180 (514)
Q Consensus 112 ~~~~-~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~----------~~g 180 (514)
++++ +++.+++.|++.|++.+......+++.|++|+++|++++++.....++|..+++.+++.+.. ..+
T Consensus 85 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~ 164 (366)
T TIGR00886 85 GLAVQSYSVLLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLA 164 (366)
T ss_pred HHHhhhHHHHHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 9999 99999999999999876556667889999999999999999998888888888877766554 348
Q ss_pred hHHHH-HHhHHHHHHH-HHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCC
Q 010268 181 WRWLL-GLSAFPSSLL-LLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNE 258 (514)
Q Consensus 181 w~~~f-~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (514)
||+.| +..++...+. .+...+.+|+|+. ++++.+.. . +
T Consensus 165 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~---------~--------------------------~ 204 (366)
T TIGR00886 165 WGWAFVIVPAGILLLPALLIFFVGADTPPG-----KPATGKLS---------F--------------------------K 204 (366)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhcccCCcc-----cccchhcc---------c--------------------------c
Confidence 99999 4444444443 3334555665421 00000000 0 0
Q ss_pred CCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 010268 259 DDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNG 338 (514)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (514)
++ . ...+ .+ ..+..++.++++ .++...+..++....++....+.|.+.++
T Consensus 205 ~~--~---~~~~--~~--------------------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
T TIGR00886 205 GA--R---WSVG--TG--------------------ALGDQLKVFRDR---HTWILALLYSVTFGSFLGVSSIFAMFFKD 254 (366)
T ss_pred cc--c---cccc--ch--------------------hHHHHHHHHhcc---chhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 0000 00 000122223222 22223333333334444555666666543
Q ss_pred ccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhc--cc--CcchhHHHH
Q 010268 339 QNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLF--QQ--PKGLTTGLL 414 (514)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~ 414 (514)
. .+.++..++....+..+.+++++++.|++.||+|+|+.+..+......+...+.. .. +.+......
T Consensus 255 ~---------~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (366)
T TIGR00886 255 Q---------FGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLF 325 (366)
T ss_pred H---------cCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHH
Confidence 2 1266666777778888899999999999999999988776666555554444332 22 333334444
Q ss_pred HHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHh
Q 010268 415 FGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIG 455 (514)
Q Consensus 415 ~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g 455 (514)
.+..+..+...+..+....+..| +.+|+++|+.+.++++|
T Consensus 326 ~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 326 VALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 55556666666777888888887 68999999999888765
No 81
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=3.9e-28 Score=234.98 Aligned_cols=379 Identities=18% Similarity=0.240 Sum_probs=262.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHH
Q 010268 28 LCVLAYAGMGWISEAMEMMLLSFV-GPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSA 106 (514)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~ 106 (514)
+.++..++..++....+...++-. +-.+.+|.+....+.+.+.+++.++++++.+++|.+.||++..+.+....+++++
T Consensus 44 l~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~ 123 (495)
T KOG2533|consen 44 LFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGL 123 (495)
T ss_pred HHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHH
Confidence 344445555555555555443322 2234588999999999999999999999999999999999999999999999988
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHh------ccc
Q 010268 107 AGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVM------PRL 179 (514)
Q Consensus 107 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~------~~~ 179 (514)
..++.....|++.+++.|++.|+.++.. |....+++.|+.+++|+..++++.+..++|.++|++++..+. ...
T Consensus 124 ~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~ 203 (495)
T KOG2533|consen 124 FGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLA 203 (495)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcC
Confidence 8888888999999999999999999998 888899999999999999999999999999999999998863 357
Q ss_pred chHHHHHHhHHHHHHHHH-HHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCC
Q 010268 180 GWRWLLGLSAFPSSLLLL-LYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNE 258 (514)
Q Consensus 180 gw~~~f~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (514)
|||+.|++.+++.++..+ .++++|++|....-. ++++..-..++.++.+....
T Consensus 204 gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl-~~~ek~~~~~~~~~~~~~~~------------------------- 257 (495)
T KOG2533|consen 204 GWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFL-TDEEKELVVERLRESPSGGI------------------------- 257 (495)
T ss_pred CceeehhHHHHHHHHHHheEEEEecCChhhcccc-chHHHHHHHHHHHhccCCCc-------------------------
Confidence 999999999998888754 477889988522000 11110000111110000000
Q ss_pred CCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 010268 259 DDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNG 338 (514)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (514)
++ +.++..+++.++. +.++...+..++.....+++.+|+|.+.++
T Consensus 258 ------------------------------~~--~~~~~~~~~a~~d---p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~ 302 (495)
T KOG2533|consen 258 ------------------------------EN--KFKWKGFKEALKD---PGVWPFSLCYFFLKLVNYGFSYWLPLYLKS 302 (495)
T ss_pred ------------------------------cc--ccCHHHHHHHHhc---hhHHHHHHHHHHHhhccccHHHHHHHHHHc
Confidence 00 0112244454444 567777888888888999999999999865
Q ss_pred ccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHH----HhhHHHHHHHHHHHHHHh-hhhhcccCcchhHHH
Q 010268 339 QNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDR----LGRKLSMSSMFFCCCIFL-VPLLFQQPKGLTTGL 413 (514)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr----~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 413 (514)
. .+++..++..+.....++++++.++.|+++|| ..+|........+..+.. +.+............
T Consensus 303 ~---------~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~ 373 (495)
T KOG2533|consen 303 N---------GGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGA 373 (495)
T ss_pred C---------CCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHH
Confidence 1 23778888899999999999999999999999 566665555554444433 444444334444444
Q ss_pred HHHHHhhhcccccceeeccccccCcchh-hHHHHHHHHHHHHhHhHHHHHHHH-HHhhcCchhHH
Q 010268 414 LFGARICITVTFTVVYVYAPEIYPTSVR-TTGVGVASSIGRIGGMVCPLVAVA-LVHGCHQTAAL 476 (514)
Q Consensus 414 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~-~~~~g~~~~~~~~g~~~~p~i~g~-l~~~~g~~~~~ 476 (514)
.+....+.....+......++......+ -+..+......+.++.++|.+.-. ....+++...+
T Consensus 374 ~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f 438 (495)
T KOG2533|consen 374 FLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVF 438 (495)
T ss_pred HHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHH
Confidence 4444455556667777777777765544 344444444445555555555432 22233444455
No 82
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.96 E-value=2.2e-27 Score=231.49 Aligned_cols=375 Identities=13% Similarity=0.078 Sum_probs=248.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh-hhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHH-
Q 010268 34 AGMGWISEAMEMMLLSFVGPAV-QSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLS- 111 (514)
Q Consensus 34 ~~l~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~- 111 (514)
+...+++.+.....+.+.+|.+ .+++|.|+.+.|++.+++.++..+++++.|+++||+|||+.++.+....+++....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~ 86 (396)
T TIGR00882 7 FGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFF 86 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 3344556666666777777765 45689999999999999999999999999999999999999988776665544322
Q ss_pred --hhhh-----hHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Q 010268 112 --AFAP-----NYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRW 183 (514)
Q Consensus 112 --~~~~-----~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~ 183 (514)
.+.+ .+..+++.+++.|++.+.. +....+..+.. ++++...|......++|.+++|.+++.+.+ .+||.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~ 163 (396)
T TIGR00882 87 IYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQI 163 (396)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchH
Confidence 1221 2334566788888888776 66666666643 234567788888889999999999998765 59999
Q ss_pred HHHHhHHHHHHHHHHHHHc-cCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCC
Q 010268 184 LLGLSAFPSSLLLLLYSVT-PESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTT 262 (514)
Q Consensus 184 ~f~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (514)
.|++.+++.++..++.+.. ||+|+. ++.++ ..+ .
T Consensus 164 ~f~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~----~~~---~------------------------------- 198 (396)
T TIGR00882 164 VFWLGSGFALILMLLLMFAKPKAPSS-------ATVAN----ALG---A------------------------------- 198 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCchh-------hhhhc----ccc---c-------------------------------
Confidence 9999888877766554443 332210 00000 000 0
Q ss_pred ccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccc
Q 010268 263 PKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKC 342 (514)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (514)
++ .+...++++++++++....+. ...++....+.....+.+.+..+..
T Consensus 199 ------~~---------------------~~~~~~~~~~~l~~~~~~~~~---l~~~~~~~~~~~~~~~~~~y~~~~~-- 246 (396)
T TIGR00882 199 ------NA---------------------SAFSLKLALELFRQRKFWMFV---LYVVGVACVYDVFDQQFANFFTSFF-- 246 (396)
T ss_pred ------cc---------------------CCCCHHHHHHHHcCCcHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 00 000001344444443222222 2222222222222223333332111
Q ss_pred ccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhc
Q 010268 343 VSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICIT 422 (514)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 422 (514)
.+.+.+....+...++..+...++.+..+++.||+|+|+.+.++..+.++.........+.+......++.+++..
T Consensus 247 ----~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~ 322 (396)
T TIGR00882 247 ----ATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVP 322 (396)
T ss_pred ----cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Confidence 0011333334666777778888899999999999999999988888877777666666666666666667776655
Q ss_pred ccccceeeccccccCcchhhHHHHH-HHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhc
Q 010268 423 VTFTVVYVYAPEIYPTSVRTTGVGV-ASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLL 492 (514)
Q Consensus 423 ~~~~~~~~~~~~~~p~~~~~~~~g~-~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 492 (514)
........+..+..|++.+++..+. .+....+|+.++|.+.|++.|..|+...+.+.+++.++..++..+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 323 FLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 5444555566777888888887766 567788999999999999999999988888888887776665443
No 83
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.4e-27 Score=216.04 Aligned_cols=367 Identities=13% Similarity=0.130 Sum_probs=278.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHH
Q 010268 27 QLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSA 106 (514)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~ 106 (514)
.+..++.+...++..++......+++|.+.+.++++..+.+++..+++.++.+.+++.|++.+|+|+|+.+++|+.+.++
T Consensus 11 ~~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~av 90 (422)
T COG0738 11 VKLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAV 90 (422)
T ss_pred ceeHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHH
Confidence 34455566666778888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHh---hhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcc----
Q 010268 107 AGLLSA---FAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPR---- 178 (514)
Q Consensus 107 ~~~~~~---~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~---- 178 (514)
++.+.. ...++..++++-++.|.|.+.. ...++++....++++..+.+++.+.+.++|.+++|++++.+..+
T Consensus 91 g~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~ 170 (422)
T COG0738 91 GAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVAL 170 (422)
T ss_pred HHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhh
Confidence 999985 4567888999999999999998 88889999999999999999999999999999999999887662
Q ss_pred ---------------cchHHHHHHhHHHHHHHHHHHHHc--cCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCc
Q 010268 179 ---------------LGWRWLLGLSAFPSSLLLLLYSVT--PESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSD 241 (514)
Q Consensus 179 ---------------~gw~~~f~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (514)
-.|+.+|...+...++..+..... |+.+....++.+.
T Consensus 171 ~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~-------------------------- 224 (422)
T COG0738 171 TMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGAS-------------------------- 224 (422)
T ss_pred ccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccccccccc--------------------------
Confidence 137777877776666555544332 2221100000000
Q ss_pred hhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHH
Q 010268 242 WEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGN 321 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 321 (514)
+.....++++++.++... +..+++
T Consensus 225 -----------------------------------------------------~~~~~~~l~~~~~~~~gv---l~~FlY 248 (422)
T COG0738 225 -----------------------------------------------------GSAGLSSLFQNKHLRLGV---LAIFLY 248 (422)
T ss_pred -----------------------------------------------------ccchHHHHHhChHHHHHH---HHHHHH
Confidence 000234455554433333 334444
Q ss_pred HHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhh
Q 010268 322 AFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPL 401 (514)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 401 (514)
.........|++.+..+. .+.+.+++....+.+..+.++|++++.++.+|+...+.+....++..+.++..
T Consensus 249 VG~Eva~gsfl~~y~~~~---------~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~ 319 (422)
T COG0738 249 VGAEVAIGSFLVSYLEEL---------LGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAV 319 (422)
T ss_pred HhHHHHHHHHHHHHHHhc---------CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 444445556666666442 23677778889999999999999999999999999999888887777777666
Q ss_pred hcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHH
Q 010268 402 LFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFEL 481 (514)
Q Consensus 402 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~ 481 (514)
.+.++ .+.....++.|++++..+|...+...+..| +. ....|....+..+|+++.|++.|++.|+.|....+.....
T Consensus 320 ~l~~g-~v~~~~l~~ig~F~simfPTIfslal~~l~-~~-ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pl 396 (422)
T COG0738 320 ALIGG-VVALYALFLIGLFNSIMFPTIFSLALKNLG-EH-TSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPL 396 (422)
T ss_pred HHhcC-hHHHHHHHHHHHHhHHHHHHHHHHHHhccC-cc-ccccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 66665 445667788899999999999999999998 33 3334444455678999999999999999988777665555
Q ss_pred HHHHHH
Q 010268 482 VILLSG 487 (514)
Q Consensus 482 ~~~~~~ 487 (514)
++.+..
T Consensus 397 lc~lyV 402 (422)
T COG0738 397 LCYLYV 402 (422)
T ss_pred HHHHHH
Confidence 544444
No 84
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.96 E-value=1e-27 Score=264.08 Aligned_cols=367 Identities=13% Similarity=-0.001 Sum_probs=249.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HhhhhcCCCc-chhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHH---HHHHHH
Q 010268 31 LAYAGMGWISEAMEMMLLSFVGP-AVQSLWHLSP-NQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLI---TAIVTS 105 (514)
Q Consensus 31 ~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~s~-~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~---~~~~~~ 105 (514)
++..+++.+.+.+....+..+.. .+..+.+.+. ...++..+++.+++.++++++|+++||+|||+++.. +.++..
T Consensus 17 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~ 96 (1140)
T PRK06814 17 FWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIA 96 (1140)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHH
Confidence 34444555555555554444433 3444444433 457888999999999999999999999999997643 222222
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHH
Q 010268 106 AAGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWL 184 (514)
Q Consensus 106 ~~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~ 184 (514)
+..+.....++++.++++|+++|++.+.. ++..+++.+++++++|++++|+.+++.++|.++||++++++....+|+..
T Consensus 97 ~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~ 176 (1140)
T PRK06814 97 ALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVIL 176 (1140)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHH
Confidence 22223334489999999999999999988 88889999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCcc
Q 010268 185 LGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPK 264 (514)
Q Consensus 185 f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (514)
|...++..++.+++.+++|+++... ++...+ ....+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~---------------------------------------- 213 (1140)
T PRK06814 177 VALLMGIAVLGWLASLFIPKTGNAA--PDLKID-RNIIRS---------------------------------------- 213 (1140)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCCC--CCCeec-cchHHH----------------------------------------
Confidence 9555555555566666676653210 000000 000000
Q ss_pred ccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccc
Q 010268 265 EMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVS 344 (514)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (514)
....++.+++++..+. ..+..+...+.......+.|.+..+.
T Consensus 214 ------------------------------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~----- 255 (1140)
T PRK06814 214 ------------------------------TITLLKYAKADKRIWL---AILGISWFWLVGAVVLSQLPLLAKET----- 255 (1140)
T ss_pred ------------------------------HHHHHHHHhcCchHHH---HHHHHHHHHHHHHHHHHHhHHHHHHH-----
Confidence 0014455555433332 22222333333344445666665432
Q ss_pred ccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcc--------------------
Q 010268 345 NELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQ-------------------- 404 (514)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-------------------- 404 (514)
.+.+....+...+...++.++|.++.|++.|+..+++.+..+.++.++..+.+.+.
T Consensus 256 ----~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 331 (1140)
T PRK06814 256 ----LGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSK 331 (1140)
T ss_pred ----cCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcc
Confidence 12666677888899999999999999999988776655444444443333222221
Q ss_pred cCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhh-cCchhHHHHHHHH
Q 010268 405 QPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHG-CHQTAALILFELV 482 (514)
Q Consensus 405 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~-~g~~~~~~~~~~~ 482 (514)
.+.+...+..++.|++.+...+...+++.+.+|++.+|+++|+.+++..++..+++.+.|.+.+. .+....+++.+++
T Consensus 332 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 332 RHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred cccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 44555666777788888888888999999999999999999999999999999999999998754 3444444444443
No 85
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.96 E-value=1.3e-27 Score=229.79 Aligned_cols=320 Identities=14% Similarity=0.125 Sum_probs=231.3
Q ss_pred HHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhh-----CChHH-HHHHHHHHHHHHHHHhhh---hh
Q 010268 46 MLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNF-----GRRKG-FLITAIVTSAAGLLSAFA---PN 116 (514)
Q Consensus 46 ~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~-----G~r~~-l~~~~~~~~~~~~~~~~~---~~ 116 (514)
...++..|.+.+++|+|.+++|+.... .+...+ .+++|+++||+ ||||. ++.+.++.++..+++++. .+
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 456778899999999999999999765 455554 99999999998 89887 566777777777777776 45
Q ss_pred HHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccc--------hHHHHHH
Q 010268 117 YYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLG--------WRWLLGL 187 (514)
Q Consensus 117 ~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~g--------w~~~f~~ 187 (514)
.+.+....++.+++.+.. ++..+++.|++|+++|+++.++...+.++|.++++.+++.+.+..+ ||..|++
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i 162 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFW 162 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHH
Confidence 666777777888877777 6677999999999999999999999999999999999999988888 9999999
Q ss_pred hHHHHHHHHHHHHH-ccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCcccc
Q 010268 188 SAFPSSLLLLLYSV-TPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEM 266 (514)
Q Consensus 188 ~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (514)
.++..++..+..++ .||+++. +...++..+ +
T Consensus 163 ~ai~~l~~~~~~~~~~~e~~~~---~~~~~~~~~---~------------------------------------------ 194 (356)
T TIGR00901 163 TALLILPGLLVTLFLAKEPQED---ASVPKPLTQ---A------------------------------------------ 194 (356)
T ss_pred HHHHHHHHHHHHHHhccCCCcc---cccchhHHH---H------------------------------------------
Confidence 88877776555443 4553210 000000000 0
Q ss_pred ccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccc
Q 010268 267 ARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNE 346 (514)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (514)
....++.+++++..+..+...+..+.....++....+.|.+..+.+
T Consensus 195 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g------ 240 (356)
T TIGR00901 195 ----------------------------VLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDMG------ 240 (356)
T ss_pred ----------------------------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC------
Confidence 0013444444443233444444444455566666666776664433
Q ss_pred ccCCCcccCcccchhhhh-hchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcc-----------cCcchhHHHH
Q 010268 347 LQSGKSRDINYGDVFITS-FAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQ-----------QPKGLTTGLL 414 (514)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~-~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 414 (514)
.+.++.+......+ +..+++.++++++.||+|+|+.+..+.++.++....+.+. ++.+......
T Consensus 241 ----~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (356)
T TIGR00901 241 ----FSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTI 316 (356)
T ss_pred ----CCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHH
Confidence 66666665555444 5778999999999999999988888777776655544322 2234445556
Q ss_pred HHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHH
Q 010268 415 FGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGR 453 (514)
Q Consensus 415 ~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 453 (514)
++.+++.+...+...++..|.+|++.||+.+|+.+...+
T Consensus 317 ~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 317 TLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 666788888899999999999999999999999887654
No 86
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.96 E-value=2.1e-26 Score=227.72 Aligned_cols=429 Identities=12% Similarity=0.011 Sum_probs=263.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-hh--cCCCcchhHHHHHHHHHHHHHhhhhHHhhhhh-hCChHHHHHHHHHHHHH
Q 010268 32 AYAGMGWISEAMEMMLLSFVGPAVQ-SL--WHLSPNQESLITSVVFAGMLVGAYSWGIVSDN-FGRRKGFLITAIVTSAA 107 (514)
Q Consensus 32 ~~~~l~~~~~~~~~~~~~~~~~~~~-~~--~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr-~G~r~~l~~~~~~~~~~ 107 (514)
..+++..+...+..+...+.+|.+. ++ +|+|..+.|++.+.+.++..++++++|+++|| +|||++++++.++.+++
T Consensus 13 ~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g 92 (475)
T TIGR00924 13 FTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLG 92 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHH
Confidence 3344555666666666666677665 44 89999999999999999999999999999999 89999999999999999
Q ss_pred HHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Q 010268 108 GLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPN---RGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRW 183 (514)
Q Consensus 108 ~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~ 183 (514)
.++++++++++.+++.|++.|++.|.. +...+++++++|+++ |++++++++.+.++|.++||.+++++.+++||+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~ 172 (475)
T TIGR00924 93 HFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHV 172 (475)
T ss_pred HHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHH
Confidence 999999988889999999999999988 788899999998764 8889999999999999999999999999899999
Q ss_pred HHHHhHHHHHHHHHHHHHccCChhhhhccCC--chHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCC
Q 010268 184 LLGLSAFPSSLLLLLYSVTPESPRYLCLKGR--TAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDT 261 (514)
Q Consensus 184 ~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (514)
.|.+.++..++..+.+++.++..+....+++ .++..+.......... .............+ +....
T Consensus 173 ~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~--~~~~~ 240 (475)
T TIGR00924 173 GFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLA----------ALALVFFCAWLMHH--VVIAN 240 (475)
T ss_pred HHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHH----------HHHHHHHHHHHHhc--cHHHH
Confidence 9999886655554444443322110000000 0000000000000000 00000000000000 00000
Q ss_pred CccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Q 010268 262 TPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNK 341 (514)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (514)
.......--.-........+. ......+++. ..++.+++........+.......+.+..+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~-~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~- 303 (475)
T TIGR00924 241 ILLMTVTLAVIIFFFRLAFKP---------------RLDAVARNKM-YAYIVLFLEAVVFWVLYAQMPTSLNFFADNNM- 303 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhc---------------cCCHHHHhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhc-
Confidence 000000000000000000000 0000000111 12222333333333333333332333321110
Q ss_pred cccccccCCC--cccCcccchhhhhhchhhHHHHHHHHHHHHhhH-----HH--HHHHHHHHHHHhhhhhc---------
Q 010268 342 CVSNELQSGK--SRDINYGDVFITSFAEFPGLLLAAAMVDRLGRK-----LS--MSSMFFCCCIFLVPLLF--------- 403 (514)
Q Consensus 342 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~-----~~--~~~~~~~~~~~~~~~~~--------- 403 (514)
+... ..-..+...++..+..++..++..++..|++|| .. +.++.++.+++++.+..
T Consensus 304 ------~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~ 377 (475)
T TIGR00924 304 ------HHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGG 377 (475)
T ss_pred ------cccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 0000 011124555566666666666655544455443 22 35667777666655542
Q ss_pred ccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHH
Q 010268 404 QQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVI 483 (514)
Q Consensus 404 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~ 483 (514)
..+.++.....++.+++.....|...++..+..|++.||+++|+......+|..+++.+.....+..++...+...++++
T Consensus 378 ~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (475)
T TIGR00924 378 LTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVT 457 (475)
T ss_pred ccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHH
Confidence 34667778888999999999999999999999999999999999999999999999999888777666776777777777
Q ss_pred HHHHHHhhcccc
Q 010268 484 LLSGISVLLFPF 495 (514)
Q Consensus 484 ~~~~~~~~~~~~ 495 (514)
++.+++.++..|
T Consensus 458 ~~~~~~~~~~~~ 469 (475)
T TIGR00924 458 LLVGVVMALMVP 469 (475)
T ss_pred HHHHHHHHHHHH
Confidence 766666655443
No 87
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.96 E-value=6.7e-27 Score=258.76 Aligned_cols=343 Identities=11% Similarity=0.008 Sum_probs=240.6
Q ss_pred HHHHHHHHHHHHhhhhcCCCc--chhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHh---hhhhH
Q 010268 43 MEMMLLSFVGPAVQSLWHLSP--NQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSA---FAPNY 117 (514)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~s~--~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~---~~~~~ 117 (514)
.+......+.+.+..+++.+. ...+++.+++.+++.++++++|+++||+|||++++++.++.+++.++.. +++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~ 103 (1146)
T PRK08633 24 NDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWF 103 (1146)
T ss_pred HHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccH
Confidence 334444555566666666654 4479999999999999999999999999999999998877665555443 45689
Q ss_pred HHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcc--------c-chHHHHHH
Q 010268 118 YLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPR--------L-GWRWLLGL 187 (514)
Q Consensus 118 ~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~--------~-gw~~~f~~ 187 (514)
+.++++|++.|++.+.. ++..+++.|++++++|++++++...+.++|.++|+++++++.+. + +|++.+.+
T Consensus 104 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 183 (1146)
T PRK08633 104 WLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGL 183 (1146)
T ss_pred HHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHH
Confidence 99999999999999988 77779999999999999999999999999999999999998775 2 34444444
Q ss_pred hHHH-HHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCcccc
Q 010268 188 SAFP-SSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEM 266 (514)
Q Consensus 188 ~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (514)
..+. .++.+++.+.+|+.|.....+.+.+ ..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------------------------------------------- 215 (1146)
T PRK08633 184 VLLAVAVLGLIFAYRLPKVPAAAPEVFDKK-KY----------------------------------------------- 215 (1146)
T ss_pred HHHHHHHHHHHHHhcCcCCCCCCccccccc-cc-----------------------------------------------
Confidence 3333 3333444555676543210000000 00
Q ss_pred ccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccc
Q 010268 267 ARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNE 346 (514)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (514)
.. .......++.+++++..+..++.. ++.....+....+.|.+..+.
T Consensus 216 ----~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~------- 262 (1146)
T PRK08633 216 ----LF-------------------PKLLWRNLKLLRSDRVLWLAIIGL---SYFWFISQLAQANFPAYAKEV------- 262 (1146)
T ss_pred ----cc-------------------HHHHHHHHHHHhcCcHHHHHHHHH---HHHHHHHHHHHHhhHHHHHHH-------
Confidence 00 000011445555554333322221 122222223333444444221
Q ss_pred ccCCCccc-CcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccc
Q 010268 347 LQSGKSRD-INYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTF 425 (514)
Q Consensus 347 ~~~~~~~~-~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 425 (514)
.+.+.. ..++..+...++.+++.++.+++.||+++++.+.++.++.+++++.+....+.+...+..++.|++.+...
T Consensus 263 --~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 340 (1146)
T PRK08633 263 --LGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFI 340 (1146)
T ss_pred --hCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhh
Confidence 125555 56778888889999999999999999998888877777777776666666666666677788888888888
Q ss_pred cceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHh
Q 010268 426 TVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVH 468 (514)
Q Consensus 426 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~ 468 (514)
+...+++.+..|++.||+++|+.+.+..+|.++++.+.+.+..
T Consensus 341 ~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 341 VPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888999999999999999999999999999888887776544
No 88
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.96 E-value=2.9e-27 Score=210.96 Aligned_cols=340 Identities=18% Similarity=0.143 Sum_probs=233.2
Q ss_pred hcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH
Q 010268 58 LWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCLVGLGLGGGPVL 137 (514)
Q Consensus 58 ~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~ 137 (514)
..+.+..-.|.+.+.+.++.++.++.+|.++||+|||++++++++..++..++.+.+.|+..++++|++.|+..|...++
T Consensus 62 ~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~ 141 (451)
T KOG2615|consen 62 PDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVI 141 (451)
T ss_pred cccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHH
Confidence 33456677899999999999999999999999999999999999999999999999999977888899999999999999
Q ss_pred HHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc---ccchHHHHHH-hH---HHHHH-HHHHHHHccCChhhh
Q 010268 138 ASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMP---RLGWRWLLGL-SA---FPSSL-LLLLYSVTPESPRYL 209 (514)
Q Consensus 138 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~---~~gw~~~f~~-~~---~~~~i-~~~~~~~~~~~~~~~ 209 (514)
.++++|.+++++|+++++.+...+++|.++||.+++++.. ..| ++.|.. +. +.... .....+++||+-+.
T Consensus 142 rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~- 219 (451)
T KOG2615|consen 142 RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPETLPL- 219 (451)
T ss_pred HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCccccc-
Confidence 9999999999999999999999999999999999999987 222 122222 11 22222 23445678887321
Q ss_pred hccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCcccccc
Q 010268 210 CLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLA 289 (514)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (514)
+++.++..+ ..+.. .++ ++.. +..
T Consensus 220 --rk~~~~~~~-~~~~~-----------------------------------------~~~--------~~~~---~~~- 243 (451)
T KOG2615|consen 220 --RKRNDEHST-LQEAA-----------------------------------------DDR--------LALL---KFA- 243 (451)
T ss_pred --hhhcccccc-hhhhh-----------------------------------------hhh--------hhhc---chh-
Confidence 111100000 00000 000 0000 000
Q ss_pred ccccchhhHHHHhhChhHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhh
Q 010268 290 NSNMGGITALLILLSPELIKSTLLL----WLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSF 365 (514)
Q Consensus 290 ~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (514)
.......+.+++... .+.. .+-.+.+...+-......+.+-. . ..++++.+.+.+++..++
T Consensus 244 -----~~~~v~~lrn~p~~~-~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~-~--------rfg~ss~~~G~vl~~tGl 308 (451)
T KOG2615|consen 244 -----RIFKVAALRNPPLLD-FISVLRIFGLHYFLYLELFSGLENTVLFLTH-G--------RFGYSSMQQGKVLSTTGL 308 (451)
T ss_pred -----hhhhhhhhcCccccc-hHHHHHHHHHHHHHHHHHHHHHHhhHHHhhc-C--------ccCCChhhheeeeehhhH
Confidence 000111111111111 1111 11222222222222222222211 1 235788888888888888
Q ss_pred chhhHHHHHHHHHHHHh--hHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhH
Q 010268 366 AEFPGLLLAAAMVDRLG--RKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTT 443 (514)
Q Consensus 366 ~~~~g~~~~g~l~dr~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~ 443 (514)
.+.+..+...+..+|.. .+..+.....++...++.+.....+..+.....+..++.....+....++....|+++||+
T Consensus 309 ~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~ 388 (451)
T KOG2615|consen 309 LMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGT 388 (451)
T ss_pred HHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchH
Confidence 77777777777777766 5566667777777777777766666677777777777777778888999999999999999
Q ss_pred HHHHHHHHHHHhHhHHHHHHHHHHhhc
Q 010268 444 GVGVASSIGRIGGMVCPLVAVALVHGC 470 (514)
Q Consensus 444 ~~g~~~~~~~~g~~~~p~i~g~l~~~~ 470 (514)
..|+....+.++.++||.+.|.+..+.
T Consensus 389 ~~Gi~~Sl~alaRaiGPlv~g~i~~Ws 415 (451)
T KOG2615|consen 389 LNGIFRSLGALARAIGPLVSGVIFSWS 415 (451)
T ss_pred HHHHHHHHHHHHHHhhhhhhheeEEEe
Confidence 999999999999999999999877654
No 89
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.95 E-value=8.5e-27 Score=230.86 Aligned_cols=335 Identities=14% Similarity=0.062 Sum_probs=234.0
Q ss_pred HHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhh----hCChH-HHHHHHHHHHHHHHHHhhhhh------H
Q 010268 49 SFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDN----FGRRK-GFLITAIVTSAAGLLSAFAPN------Y 117 (514)
Q Consensus 49 ~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr----~G~r~-~l~~~~~~~~~~~~~~~~~~~------~ 117 (514)
..+.+.+.+++|+|+.++|++.++..+..++..|+.|+++|| +|||| .++.+....+++.+++.+.++ .
T Consensus 20 ~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~ 99 (437)
T TIGR00792 20 TYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKL 99 (437)
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHH
Confidence 445667788899999999999999999999999999999997 67744 677788888888887776653 4
Q ss_pred HHHHHHHHHHhhhccch-hhHHHHHHhhc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHh-------cccchHHHHHHh
Q 010268 118 YLLLFFRCLVGLGLGGG-PVLASWFLEFI-PAPNRGFWMVIFQTFWTVGTILEAGIAWLVM-------PRLGWRWLLGLS 188 (514)
Q Consensus 118 ~~l~~~r~l~G~~~g~~-~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~-------~~~gw~~~f~~~ 188 (514)
..+++.+++.+++.+.. .+..++..|.. ++++|++..++.+.+..+|..+++.+.+.+. +..+||..+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~ 179 (437)
T TIGR00792 100 VYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVL 179 (437)
T ss_pred HHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHH
Confidence 56677788888888877 45557778877 5688999999999999998888776655544 246899999988
Q ss_pred HHHHHHHHHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccc
Q 010268 189 AFPSSLLLLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMA 267 (514)
Q Consensus 189 ~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (514)
+++.++..+. .+..+|+++. .+.++
T Consensus 180 ~~l~~~~~~~~~~~~~e~~~~----~~~~~-------------------------------------------------- 205 (437)
T TIGR00792 180 ALIGVVSLIICFFGTKERYSE----IPKNI-------------------------------------------------- 205 (437)
T ss_pred HHHHHHHHHHHHcCCEecCCC----CCccc--------------------------------------------------
Confidence 8887776554 4445553210 00000
Q ss_pred cCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccc
Q 010268 268 RDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNEL 347 (514)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (514)
+. .....+.++.+++++..+.. ....+.....++....+.+++.+...
T Consensus 206 ~~----------------------~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~------- 253 (437)
T TIGR00792 206 EK----------------------KLSLKQIFKALFKNDQLLIL---CLAYLFYNLAFNIKNGVQVYYFTYVL------- 253 (437)
T ss_pred cc----------------------CCCHHHHHHHHhCCHHHHHH---HHHHHHHHHHHHHHcchhheeEeeec-------
Confidence 00 00001144555555433322 22233333333333333444432211
Q ss_pred cCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhccc-CcchhHHHHHHHHhhhccccc
Q 010268 348 QSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQ-PKGLTTGLLFGARICITVTFT 426 (514)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~ 426 (514)
.+....+....+..++.+++.++.+++.||+|+|+.+..+..+.++..+.+.+.. +.+...+..++.+++.+...+
T Consensus 254 ---~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 330 (437)
T TIGR00792 254 ---GDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTG 330 (437)
T ss_pred ---CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHH
Confidence 1223334556667888999999999999999999999888887777666655433 334445556677778887788
Q ss_pred ceeeccccccC-------cchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCc
Q 010268 427 VVYVYAPEIYP-------TSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQ 472 (514)
Q Consensus 427 ~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~ 472 (514)
..+++.+|..+ ++.+|+++|+.+.+..+|..+++.+.|.+.+..|+
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 331 LVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88888888765 45689999999999999999999999999988765
No 90
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.95 E-value=7.8e-26 Score=201.59 Aligned_cols=367 Identities=17% Similarity=0.140 Sum_probs=284.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHH
Q 010268 28 LCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAA 107 (514)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~ 107 (514)
+..+..+.+..+.---.....+|+++++.+++|+|.+..|++.++..+...+.+++..+++.|+|.++.+..++++.++|
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G 90 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAG 90 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 44444444444444455678899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhHHHHHHHHHHHhhhccchhhH-HHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhccc-chHHHH
Q 010268 108 GLLSAFAPNYYLLLFFRCLVGLGLGGGPVL-ASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRL-GWRWLL 185 (514)
Q Consensus 108 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~-gw~~~f 185 (514)
.++-... +.+.++.+-.+.|.+.+...+. .+.+-+.+| ++-+..+|+|....++|..+++.+...+.++. |||...
T Consensus 91 ~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL 168 (395)
T COG2807 91 ILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGAL 168 (395)
T ss_pred HHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHH
Confidence 9998877 7788888999999999988544 467777765 57899999999999999999999998888876 799999
Q ss_pred HHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccc
Q 010268 186 GLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKE 265 (514)
Q Consensus 186 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (514)
.+-+.++++.++.++.-. .|. +......
T Consensus 169 ~~WAl~allAl~~WlPq~--~r~----~~~~~~~---------------------------------------------- 196 (395)
T COG2807 169 GFWALLALLALLIWLPQA--LRE----QAASIAT---------------------------------------------- 196 (395)
T ss_pred HHHHHHHHHHHHHHhhhc--ccc----ccccccc----------------------------------------------
Confidence 999999888877764432 110 0000000
Q ss_pred cccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccc
Q 010268 266 MARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSN 345 (514)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (514)
+.++-..++++ +..|.+.+.+..+...+|....|+|.+..+.+
T Consensus 197 -----------------------------~~~~~~~vw~~---~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G----- 239 (395)
T COG2807 197 -----------------------------KLVSVRKVWRS---PLAWQVTLFMGLQSLLYYIVIGWLPAILIDRG----- 239 (395)
T ss_pred -----------------------------ccccccccccC---chhHHHHHHHHhhHHHHHHHHHHHHHHHHHcC-----
Confidence 00011112333 34566677778899999999999999998766
Q ss_pred cccCCCcccCcccchhhhhhchhhHHHHHHHHHHHH-hhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhccc
Q 010268 346 ELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRL-GRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVT 424 (514)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 424 (514)
.+.++++...++..+..++.++....+.+|. ++|+.......++.++.+.+.+.+.... +...++.|++.++.
T Consensus 240 -----~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~-~lw~~llG~G~G~~ 313 (395)
T COG2807 240 -----LSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLP-ILWALLLGLGQGGA 313 (395)
T ss_pred -----CCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHH-HHHHHHHhCccchH
Confidence 9999999999999999999999999999976 4666666667777777776665443322 22268889999999
Q ss_pred ccceeeccccccC-cchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHH-HHHHHHHHHHhh
Q 010268 425 FTVVYVYAPEIYP-TSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILF-ELVILLSGISVL 491 (514)
Q Consensus 425 ~~~~~~~~~~~~p-~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~-~~~~~~~~~~~~ 491 (514)
+|....++....+ ++..+.-.|+.+.++++-..+||.+.|++.|..|.+...+.. ..+.++..+.-+
T Consensus 314 F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl 382 (395)
T COG2807 314 FPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGL 382 (395)
T ss_pred HHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHh
Confidence 9999888887765 456788899999999999999999999999998876554443 333333333333
No 91
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.95 E-value=2.1e-25 Score=216.98 Aligned_cols=367 Identities=12% Similarity=-0.035 Sum_probs=244.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHH--HHHHHHHHHhhhhHHh-hhhhhCChHHHHHHHHHH-HH
Q 010268 31 LAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLIT--SVVFAGMLVGAYSWGI-VSDNFGRRKGFLITAIVT-SA 106 (514)
Q Consensus 31 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~--s~~~~~~~i~~~~~G~-l~Dr~G~r~~l~~~~~~~-~~ 106 (514)
+..++..++.++.......+.+|.+.++.|.|.+++|++. +...+...+.+|+++. ..||+||||..++...+. .+
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 4556677899999999999999999999999999999974 6668888888888854 799999999876555332 21
Q ss_pred HHHHHh---hhhh-HHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 010268 107 AGLLSA---FAPN-YYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGW 181 (514)
Q Consensus 107 ~~~~~~---~~~~-~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw 181 (514)
...... ...+ ...++...++.++..+.. +...++..|..++++++...+....+..+|.++++...+++.+.+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw 162 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQ 162 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 222222 2222 333344444555555555 55567888888888888888999889999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCC
Q 010268 182 RWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDT 261 (514)
Q Consensus 182 ~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (514)
|..|++.++..++..+..++++|+++. +++.++.
T Consensus 163 ~~~f~~~a~l~~~~~~~~~~~~~~~~~---~~~~~~~------------------------------------------- 196 (390)
T TIGR02718 163 RPAFLLVACVPLASLVCVLWLKDRAVA---SPEAPLA------------------------------------------- 196 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcC---ccccchh-------------------------------------------
Confidence 999999998887766665555443210 0000000
Q ss_pred CccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Q 010268 262 TPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNK 341 (514)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (514)
....++++++++..+..+...+. ..........+.+.+..+.+
T Consensus 197 ---------------------------------~~~~~~~~l~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~l~~~G- 239 (390)
T TIGR02718 197 ---------------------------------RRASLFRFFRRPLAWSLLALALL---SAMTAVSGFGLSKLYLVDAG- 239 (390)
T ss_pred ---------------------------------hHHHHHHHHcCcCHHHHHHHHHH---HHHHHHHHHHHhhHHHHhcC-
Confidence 00033344444333333332222 22222223334444444333
Q ss_pred cccccccCCCcccCcccchhhhh-hchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhc------ccCcchhHHHH
Q 010268 342 CVSNELQSGKSRDINYGDVFITS-FAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLF------QQPKGLTTGLL 414 (514)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 414 (514)
.+++..+......+ ...+++.++.|++.||+|+|+.+..+..+.++..+.... ..+........
T Consensus 240 ---------~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (390)
T TIGR02718 240 ---------WPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCS 310 (390)
T ss_pred ---------CCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHH
Confidence 77777777766665 466778899999999999999888776655332222211 11112222223
Q ss_pred HHHHhhhcccccceeeccccccCc-chhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q 010268 415 FGARICITVTFTVVYVYAPEIYPT-SVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGIS 489 (514)
Q Consensus 415 ~~~g~~~~~~~~~~~~~~~~~~p~-~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 489 (514)
.+.+++.+..++...+...+..++ +.+++.+++.+...++|..++|.+.|.+.|..|+...+...+++.+++.++
T Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 311 AFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 333445566666666676677665 789999999999999999999999999999999877777776666555443
No 92
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.95 E-value=1.6e-25 Score=221.47 Aligned_cols=417 Identities=12% Similarity=0.017 Sum_probs=249.4
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhh-hCChHHHHHHHHHHHHHH
Q 010268 31 LAYAGMGWISEAMEMMLL-SFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDN-FGRRKGFLITAIVTSAAG 108 (514)
Q Consensus 31 ~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr-~G~r~~l~~~~~~~~~~~ 108 (514)
+..+++..+...+..+.. ..+..++.+++|.+..+.+++.+.+.....+..+++|+++|| +||||+++++.+++.++.
T Consensus 16 ~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~ 95 (489)
T PRK10207 16 FFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGY 95 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHH
Confidence 333444445555554444 444556678899999999999999998899999999999999 999999999999999999
Q ss_pred HHHhhhhhHHH-HHHHHHHHhhhccch-hhHHHHHHhhcCCC--chhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHH
Q 010268 109 LLSAFAPNYYL-LLFFRCLVGLGLGGG-PVLASWFLEFIPAP--NRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWL 184 (514)
Q Consensus 109 ~~~~~~~~~~~-l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~ 184 (514)
++++++++... ++++|+++|+|.|.. +...+++.|.+|++ +|++++++++.+.++|..+||.+++++.+++|||+.
T Consensus 96 ~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~ 175 (489)
T PRK10207 96 FMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVT 175 (489)
T ss_pred HHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHH
Confidence 99998876444 557899999999998 88889999999877 457899999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHccCChhhhh--ccCCchHHHHHHH----------HHHHHhCCCCCCCCCCCchhhhhhhhhcc
Q 010268 185 LGLSAFPSSLLLLLYSVTPESPRYLC--LKGRTAEARHVLE----------KIAKINGTKLPSGNLVSDWEHELQNKSLL 252 (514)
Q Consensus 185 f~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (514)
|++.++..++.++.+...++..+... .++++.+...... ........... ..........-
T Consensus 176 F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i-- 248 (489)
T PRK10207 176 YNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEV-----ANLVLIVLSIV-- 248 (489)
T ss_pred HHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhH-----HHHHHHHHHHH--
Confidence 99876544444444444432211100 0010001000000 00000000000 00000000000
Q ss_pred cCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010268 253 SSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLT 332 (514)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (514)
.. .--..++.+ ....++++.... ..++.........+.......
T Consensus 249 -----------~~-------~~f~~~~~~-----------------~~~~~r~r~~~~-~~l~~~~~~f~~~~~q~~~~l 292 (489)
T PRK10207 249 -----------VT-------IIFFREAFK-----------------LDKTGRNKMFVA-FVLMLEAVVFYILYAQMPTSL 292 (489)
T ss_pred -----------HH-------HHHHHHHhc-----------------CCHHHHHHHHHH-HHHHHHHHHHHHHHHHcccHH
Confidence 00 000000000 000111111111 111111222222232222333
Q ss_pred HHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHH-------HHHHHHHHHHHHhhhh----
Q 010268 333 TELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKL-------SMSSMFFCCCIFLVPL---- 401 (514)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~-------~~~~~~~~~~~~~~~~---- 401 (514)
+.+.++.. +....|... .......+..+..++..++.+++.||+++|+ .+.+++++.+++++.+
T Consensus 293 ~l~~~~~~----~~~~~G~~i-~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~ 367 (489)
T PRK10207 293 NFFAINNV----HHEILGFSI-NPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAG 367 (489)
T ss_pred HHHHHHhc----cccccceEE-CHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 33332110 000001111 1122233344556677888899999999886 3556666666554322
Q ss_pred -hcc-----cCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHh-------
Q 010268 402 -LFQ-----QPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVH------- 468 (514)
Q Consensus 402 -~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~------- 468 (514)
... .+.++.....++.+++.....+...+.+.+..|++.+|.++|+.+....+|+.++..+......
T Consensus 368 ~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~ 447 (489)
T PRK10207 368 MWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDP 447 (489)
T ss_pred HhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 111 2345566778889999999999999999999999999999999999999999999888765421
Q ss_pred --hc-CchhHHHHHHHHHHHHHHHhhcccc
Q 010268 469 --GC-HQTAALILFELVILLSGISVLLFPF 495 (514)
Q Consensus 469 --~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 495 (514)
.. .+...|...++..++++++.++..|
T Consensus 448 ~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~ 477 (489)
T PRK10207 448 LETLPVYTNVFGKIGLVTLGVAVVMALMVP 477 (489)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01 1234455566666655555554433
No 93
>PTZ00207 hypothetical protein; Provisional
Probab=99.95 E-value=6.2e-25 Score=216.68 Aligned_cols=448 Identities=13% Similarity=0.060 Sum_probs=268.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHH
Q 010268 25 KFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVT 104 (514)
Q Consensus 25 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~ 104 (514)
.+||..++......... ...+.++.+.|.+.+++|+|..+++++.++. ....+++++.|++.||+|+|++++++.+++
T Consensus 24 ~~Rw~~lva~~~~~~~~-g~~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~ 101 (591)
T PTZ00207 24 PRRFALLVLGAFCSICT-SFMYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVF 101 (591)
T ss_pred cchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 55666655554444433 3345677888999999999999999998874 445677889999999999999999999999
Q ss_pred HHHHHHHhhh------hhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHH-HHHHHHh
Q 010268 105 SAAGLLSAFA------PNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEA-GIAWLVM 176 (514)
Q Consensus 105 ~~~~~~~~~~------~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~-~i~~~l~ 176 (514)
++++++++++ ++++.+++.|++.|+|.+.. +.+...+.+|+| ++||++.|+...+.++|.++.+ +..+++.
T Consensus 102 ~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~ 180 (591)
T PTZ00207 102 CLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS 180 (591)
T ss_pred HHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987 68999999999999998887 666677888886 7899999999999999998644 4444443
Q ss_pred cccchHHHHHHhHHHHHHHHHH-HHHccCCh--hhhhccCCchHHHHHHHHHHHH-hCCCCCCC-CC-------------
Q 010268 177 PRLGWRWLLGLSAFPSSLLLLL-YSVTPESP--RYLCLKGRTAEARHVLEKIAKI-NGTKLPSG-NL------------- 238 (514)
Q Consensus 177 ~~~gw~~~f~~~~~~~~i~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~------------- 238 (514)
.+|+..|++.+++.++..++ +.++++.| ++...+++.++.++..++..+. .-+++++. ..
T Consensus 181 --~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~y 258 (591)
T PTZ00207 181 --DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVF 258 (591)
T ss_pred --HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHH
Confidence 47888888888777776544 44443333 2221222222222221111110 00000000 00
Q ss_pred -------------CCchhh----------------hhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCcccccc
Q 010268 239 -------------VSDWEH----------------ELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLA 289 (514)
Q Consensus 239 -------------~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (514)
...... .+.-+..+..+. ++++.+++.+..+.+.+. .+++........+
T Consensus 259 l~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 336 (591)
T PTZ00207 259 LPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRP-HDDSDGKAKEHVEAGEEV-SAAEDKVVETDVD 336 (591)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCc-CCCccccccccccccccc-ccccccccccccc
Confidence 000000 000000000000 000000000000000000 0000000000001
Q ss_pred ccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccC--cccchhhhhhch
Q 010268 290 NSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDI--NYGDVFITSFAE 367 (514)
Q Consensus 290 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 367 (514)
...++...++++.+++ ..+|+++..+++.............++.+..+ |.+.+. ...+.++.++.+
T Consensus 337 ~~~P~~~~t~~q~l~~---~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~---------g~~~~~~~~~~~vsL~si~~ 404 (591)
T PTZ00207 337 YIAPQFQETFIEGLKT---ARLWCLLWSIFCCVGAHFVIIFNARFIYTALA---------GEAPDDALNTLLTVLNGVGS 404 (591)
T ss_pred CCCCCCcchHHHHHhc---hhHHHHHHHHHHhhCchheeeecHHHHHHHhc---------CCCCCccceeeehhhhhHHH
Confidence 0001111144444433 44556666666555554444444544443321 132222 333788999999
Q ss_pred hhHHHHHHHHHHHHhhHH---------HHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCc
Q 010268 368 FPGLLLAAAMVDRLGRKL---------SMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPT 438 (514)
Q Consensus 368 ~~g~~~~g~l~dr~g~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 438 (514)
.+|++..|.+.....+|+ .+.+..+ +.+..+++....+...+.+..++.|++.|..+++....++|++.
T Consensus 405 ~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg- 482 (591)
T PTZ00207 405 AVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA- 482 (591)
T ss_pred HhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-
Confidence 999999999883332222 2333333 44444444444333567888899999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHhHhHH-HHHHHHHHhhcC-------------chhHHHHHHHHHHHHHHHhhcc
Q 010268 439 SVRTTGVGVASSIGRIGGMVC-PLVAVALVHGCH-------------QTAALILFELVILLSGISVLLF 493 (514)
Q Consensus 439 ~~~~~~~g~~~~~~~~g~~~~-p~i~g~l~~~~g-------------~~~~~~~~~~~~~~~~~~~~~~ 493 (514)
++-|+-+-+.....-+|..+. -.+.|.++|.-. ...++++++++++++.+....+
T Consensus 483 k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l 551 (591)
T PTZ00207 483 KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYV 551 (591)
T ss_pred cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhe
Confidence 888888888777777777776 677888887432 3467888888888777765544
No 94
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.95 E-value=1.2e-25 Score=211.08 Aligned_cols=364 Identities=12% Similarity=0.062 Sum_probs=241.0
Q ss_pred HHHHHHHHHHHHHhhhhcCCCcch-hHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHH
Q 010268 42 AMEMMLLSFVGPAVQSLWHLSPNQ-ESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLL 120 (514)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~s~~~-~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l 120 (514)
.-.+...+++.|.+.+++|+|.++ .|.+.+++..++++++++.|.++||+|.|+++.++.+.+++..++.++++++..+
T Consensus 39 ~e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L 118 (511)
T TIGR00806 39 AQFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHM 118 (511)
T ss_pred HHhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344778889999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccchhhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH---hHHHHHHHHH
Q 010268 121 LFFRCLVGLGLGGGPVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGL---SAFPSSLLLL 197 (514)
Q Consensus 121 ~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~---~~~~~~i~~~ 197 (514)
.+.|++.|++.|...+...++..|+|+++|+++.++..++..+|.++++++++. ...+|||..+.+ ......++++
T Consensus 119 ~i~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~ 197 (511)
T TIGR00806 119 QLMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVF 197 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHH
Confidence 999999999999988666899999999999999999999999999999999999 456899976543 3344445566
Q ss_pred HHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhh
Q 010268 198 LYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAK 277 (514)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (514)
+.+++|..++...-+++.+. ++. . ..+.++..+.+. ..+.+..+
T Consensus 198 ~a~~LP~~~~sl~f~~~~~~-~~~---~-----------------------------~~~~~~~~~~~~-~~~~~~~~-- 241 (511)
T TIGR00806 198 LALFLKRPKRSLFFNRLEDV-RGA---L-----------------------------PCELDQMVPGPG-GKLEDYLG-- 241 (511)
T ss_pred HHHhCCCCchhhhhcccccc-ccc---c-----------------------------ccccccCCCCCc-cccchhhh--
Confidence 77888865542221111000 000 0 000000000000 00000000
Q ss_pred hhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcc
Q 010268 278 EMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINY 357 (514)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (514)
.+. .+..+.-+..++...+++. ++.-.+-+......++-+..|...+-+... . ..+...|
T Consensus 242 -~~~-------~~~~~~l~~~~~~~y~n~~---vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~--------~-~~~~yNG 301 (511)
T TIGR00806 242 -TCR-------DSFLVRMLSELVTIYRNPQ---LLLWSLWWVFNSAGYYLITYYVHTLWGTLD--------E-SLNKYNG 301 (511)
T ss_pred -hhh-------hHHHHHHHHHHHHHhcCcc---hhhhhHHHHHHhhHHHHHHHHHHHHHHHcC--------C-CccccCC
Confidence 000 0000011122333333321 111112223333444444444444432221 0 0111346
Q ss_pred cchhhhhhchhhHHHHHHHHHHHHhhH--HHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccc
Q 010268 358 GDVFITSFAEFPGLLLAAAMVDRLGRK--LSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEI 435 (514)
Q Consensus 358 ~~~~~~~~~~~~g~~~~g~l~dr~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 435 (514)
..-.+..+.+.+..+..|++-.+..+. ..+.++.++.+..++++...++.|..++..++++.......++...-+++.
T Consensus 302 ~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~ 381 (511)
T TIGR00806 302 AVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIASS 381 (511)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666777788888888885555432 334444455555666667788888888888888888888878888778888
Q ss_pred cCcchhhHHHHHHHHHHHHhHhHHHHH
Q 010268 436 YPTSVRTTGVGVASSIGRIGGMVCPLV 462 (514)
Q Consensus 436 ~p~~~~~~~~g~~~~~~~~g~~~~p~i 462 (514)
...+.-|..+|+.+.+.-+-..+-..+
T Consensus 382 L~~~~~aLvFGiNtfvAl~LQtilT~i 408 (511)
T TIGR00806 382 LSKELCALVFGINTFVATALKTIITAV 408 (511)
T ss_pred hcccceEEEEecHHHHHHHHHHheEEE
Confidence 877777999998887776555444433
No 95
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=1e-26 Score=208.80 Aligned_cols=344 Identities=17% Similarity=0.069 Sum_probs=249.2
Q ss_pred hhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccch-h
Q 010268 57 SLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCLVGLGLGGG-P 135 (514)
Q Consensus 57 ~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~ 135 (514)
.+++-+.+++|++.+...+...+..++.|.+.||+|+|..+++|+.++..+++++++.++++.++++|.++|+|.++. .
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHh
Confidence 456778899999999999999999999999999999999999999999999999999999999999999999999998 6
Q ss_pred hHHHHHHhhcCCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHHHHccCChhhhhccCC
Q 010268 136 VLASWFLEFIPAPN-RGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGR 214 (514)
Q Consensus 136 ~~~~~i~~~~~~~~-r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 214 (514)
+..+++++.+|+++ |++++|+...+.++|.++||++++++.+..|.+.+|++.++++++...+.+++-|..+ .+
T Consensus 179 sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~-----~~ 253 (464)
T KOG3764|consen 179 SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTE-----MD 253 (464)
T ss_pred hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccc-----cC
Confidence 66799999998765 7999999999999999999999999999999999999999999998877666544311 00
Q ss_pred chHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccc
Q 010268 215 TAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMG 294 (514)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (514)
+++ +++.
T Consensus 254 ~~~--------------------------------------------------------------~~~~----------- 260 (464)
T KOG3764|consen 254 PDS--------------------------------------------------------------TEQG----------- 260 (464)
T ss_pred ccc--------------------------------------------------------------cccC-----------
Confidence 000 0000
Q ss_pred hhhHHHHhhChhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHH
Q 010268 295 GITALLILLSPELIKST-LLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLL 373 (514)
Q Consensus 295 ~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 373 (514)
.+++.+++.++.... ..++....+..+..=.+..|...-. ..+....+..+....+...++..+
T Consensus 261 --~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m-------------~~p~w~~G~~fLp~~~~y~ig~~l 325 (464)
T KOG3764|consen 261 --TPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETM-------------FTPGWEVGLAFLPASLSYAIGTNL 325 (464)
T ss_pred --ccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhc-------------cCCCcceeeeecccccchhccCch
Confidence 034444444332211 1111111112222222223222211 123335577888888999999999
Q ss_pred HHHHHHHHh--hHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhccccccee---eccccccCcc---hhhHHH
Q 010268 374 AAAMVDRLG--RKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVY---VYAPEIYPTS---VRTTGV 445 (514)
Q Consensus 374 ~g~l~dr~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~p~~---~~~~~~ 445 (514)
.|.+.||++ |......+.+..+.+.....+.++...+++-....+++.+....... .+..+....+ .-|.+.
T Consensus 326 fg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVy 405 (464)
T KOG3764|consen 326 FGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVY 405 (464)
T ss_pred HHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHH
Confidence 999999998 65555566666666666666666655444444443343333322222 2222222223 568899
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcc
Q 010268 446 GVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLF 493 (514)
Q Consensus 446 g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 493 (514)
++......+|.++||.++|.+.+..|..+...+.++..++.+-++..+
T Consensus 406 aIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 406 AIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLL 453 (464)
T ss_pred HHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998888888887777665544
No 96
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.94 E-value=1.6e-25 Score=227.41 Aligned_cols=374 Identities=13% Similarity=0.116 Sum_probs=257.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHH
Q 010268 30 VLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGL 109 (514)
Q Consensus 30 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~ 109 (514)
.++...+..+.........+..++.+.++|+++..+.|++.+.+.++++++.++.|++.||+|||+++.++.++++++.+
T Consensus 34 ~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~l 113 (633)
T TIGR00805 34 FSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSF 113 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHH
Confidence 33445556777777788889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhh---------------------------------------------------hHHHHHHHHHHHhhhccch-hhH
Q 010268 110 LSAFAP---------------------------------------------------NYYLLLFFRCLVGLGLGGG-PVL 137 (514)
Q Consensus 110 ~~~~~~---------------------------------------------------~~~~l~~~r~l~G~~~g~~-~~~ 137 (514)
++++.+ .+..++++|+++|+|.+.. +..
T Consensus 114 l~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~ 193 (633)
T TIGR00805 114 LLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLG 193 (633)
T ss_pred HHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcC
Confidence 987753 2456788999999999988 777
Q ss_pred HHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhccc----------------------chHHHHHHhHHHHHHH
Q 010268 138 ASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRL----------------------GWRWLLGLSAFPSSLL 195 (514)
Q Consensus 138 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~----------------------gw~~~f~~~~~~~~i~ 195 (514)
.+++.|++|+++|+++++++..+..+|.++|+++++++.+.+ +|+..|++.+++.++.
T Consensus 194 ~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~ 273 (633)
T TIGR00805 194 ISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLT 273 (633)
T ss_pred chhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 799999999999999999999999999999999999887532 2788899888888887
Q ss_pred HHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhH
Q 010268 196 LLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISE 275 (514)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (514)
.+.++++|++.+. .....+.+. .++. .. + + .+++.....
T Consensus 274 ~v~l~~~p~~lp~---~~~~~~~~~-~~~~-~~-----------------------------~-----~--~~~~~~~~~ 312 (633)
T TIGR00805 274 SIPFFFFPKALPK---EGKRVNVDV-HETE-KL-----------------------------E-----K--SEDKSRKKN 312 (633)
T ss_pred HHHHHhCccccCC---cccccchhh-hhhh-cc-----------------------------c-----c--cccccchhh
Confidence 7667777765321 000000000 0000 00 0 0 000000000
Q ss_pred hhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccC
Q 010268 276 AKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDI 355 (514)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (514)
. ...+.....++.+++++ .++...+..++....++++..|.|.+.++. .+.++..
T Consensus 313 ~-------------~~~~~~~~~~~~Ll~n~---~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~---------~g~s~~~ 367 (633)
T TIGR00805 313 S-------------DITKDFPKIIKRLLCNP---IYMLVILAQVIDSLAFNGYITFLPKYLENQ---------YGISSAE 367 (633)
T ss_pred h-------------hhHHHHHHHHHHHHcCc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------cCCcHHH
Confidence 0 00000122455666663 444555555566667777788888887543 2377777
Q ss_pred cccchhhhhh-chhhHHHHHHHHHHHHh--hHHHHHHHHHHHHHHhhhhh----c-----------------------c-
Q 010268 356 NYGDVFITSF-AEFPGLLLAAAMVDRLG--RKLSMSSMFFCCCIFLVPLL----F-----------------------Q- 404 (514)
Q Consensus 356 ~~~~~~~~~~-~~~~g~~~~g~l~dr~g--~~~~~~~~~~~~~~~~~~~~----~-----------------------~- 404 (514)
++....+..+ +.++|.+++|+++||++ .|+.+..+.++..+.++... . .
T Consensus 368 ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~agv~~~y~~~~~~~~~~~ 447 (633)
T TIGR00805 368 ANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLLCSPLFLIGCESAPVAGVNNPSTDQSIYVENPT 447 (633)
T ss_pred HHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHHHHHHHeecCCCCccceeeccCCCcccCCCChh
Confidence 7777666555 56899999999999987 44555555544444322210 0 0
Q ss_pred ---------cC-----------------------------------------------------------cchhHHHHHH
Q 010268 405 ---------QP-----------------------------------------------------------KGLTTGLLFG 416 (514)
Q Consensus 405 ---------~~-----------------------------------------------------------~~~~~~~~~~ 416 (514)
.. ...+++..++
T Consensus 448 ~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~~~y~~CsCi~~~~~~~a~~g~C~~~C~~~~~~f~~~~~~ 527 (633)
T TIGR00805 448 DCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSNMVYTNCSCVQTPGNSSAKKGLCNPPCATSLLYFLILFIP 527 (633)
T ss_pred ccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCcceecccccccCCCCCCCcCCCCCcccchhHHHHHHHHHH
Confidence 00 0001111112
Q ss_pred HHhhhcccccceeeccccccCcchhhHHHHHHHHHHH-HhHhHHHHHHHHHHhh
Q 010268 417 ARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGR-IGGMVCPLVAVALVHG 469 (514)
Q Consensus 417 ~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~~~p~i~g~l~~~ 469 (514)
..+............+-+.+|+++|+.+.|+...+.. +|.+-+|+++|.+.|.
T Consensus 528 ~~~~~~~~~~p~~~i~lR~V~~~~rs~alg~~~~~~rllg~iP~pi~fG~~iD~ 581 (633)
T TIGR00805 528 LSFIAFITAVPLYMVLLRVVNPEEKSLAIGLQWLCMRVFATIPAPILFGLLIDV 581 (633)
T ss_pred HHHHHHhccCchheEEeeccCcccchHHhhHHHHHHHHhcCCChhHHHhhhhhc
Confidence 2222223334455667788999999999999998887 7888999999999984
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.94 E-value=3.3e-24 Score=213.36 Aligned_cols=414 Identities=10% Similarity=-0.012 Sum_probs=234.8
Q ss_pred HHHHHHHHHHHHHHHHHH-HhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhh-hCChHHHHHHHHHHHHHHHHHhh
Q 010268 36 MGWISEAMEMMLLSFVGP-AVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDN-FGRRKGFLITAIVTSAAGLLSAF 113 (514)
Q Consensus 36 l~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr-~G~r~~l~~~~~~~~~~~~~~~~ 113 (514)
+..+...+..+.+...++ ++.+++|+|..+.+++.+.+........+++|+++|| +|||+.++++.++.+++..++++
T Consensus 28 ~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~ 107 (500)
T PRK09584 28 SIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAW 107 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444 5568899999999999888877767777899999999 59999999999999999998888
Q ss_pred hh-hHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhH
Q 010268 114 AP-NYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPN--RGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSA 189 (514)
Q Consensus 114 ~~-~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~ 189 (514)
++ +.+.+++.|++.|++.|.. +...+++.|++|+++ |+.++++++.+.++|..++|.+++++.+++|||+.|++.+
T Consensus 108 ~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~ 187 (500)
T PRK09584 108 SGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSV 187 (500)
T ss_pred hcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHH
Confidence 74 4666778899999999987 777789999997654 4568899999999999999999999999999999999987
Q ss_pred HHHHHHHHHHHH----ccCChhhhhccCCchHHHHHHHH--H-HHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCC
Q 010268 190 FPSSLLLLLYSV----TPESPRYLCLKGRTAEARHVLEK--I-AKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTT 262 (514)
Q Consensus 190 ~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (514)
+..++.++.+++ +++.++.. .+++.+........ . .-... .....+
T Consensus 188 i~~~i~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~------------- 240 (500)
T PRK09584 188 VGMLITVVNFAFCQRWVKQYGSKP-DFEPINYRKLLLTIVGVVALIAI-------------ATWLLH------------- 240 (500)
T ss_pred HHHHHHHHHHHHhHHHhccCCCCC-CccccchhhHHHHHHHHHHHHHH-------------HHHHHh-------------
Confidence 655554433222 23321100 00000000000000 0 00000 000000
Q ss_pred ccccccCCCchhHhhhhccCCccccccccccchhhHHHH--hhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc
Q 010268 263 PKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLI--LLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQN 340 (514)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (514)
+.+.......-. .. .......+. ..++..+++.+..+. .+.....+|......+.......
T Consensus 241 ------~~~~~~~~~~~~--~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~f~~~~~q~~~~l~~~~ 303 (500)
T PRK09584 241 ------NQEIARMALGVV--AL--------GIVVIFGKEAFAMKGAARRKMIVAFI-LMLEAIIFFVLYSQMPTSLNFFA 303 (500)
T ss_pred ------cchHHHHHHHHH--HH--------HHHHHHHHHHhhcCHHHHHHHHHHHH-HHHHHHHHHHHHHHhccHHHHHH
Confidence 000000000000 00 000000000 001111122222221 12223333333333333221100
Q ss_pred ccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHH----hhHHHHHHHHHHHHHHhhhhhcccC---------c
Q 010268 341 KCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRL----GRKLSMSSMFFCCCIFLVPLLFQQP---------K 407 (514)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~----g~~~~~~~~~~~~~~~~~~~~~~~~---------~ 407 (514)
....+....+.. .......++..+..++..++..++-+|. +..+.+.+++++.+++++.+..... .
T Consensus 304 ~~~~~~~~~g~~-i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~ 382 (500)
T PRK09584 304 IRNVEHSILGIA-VEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSV 382 (500)
T ss_pred HHhccccccceE-ECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCH
Confidence 000000000011 1123344455555555555554444444 4446777888888887776553322 3
Q ss_pred chhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHh----------hcCchhHHH
Q 010268 408 GLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVH----------GCHQTAALI 477 (514)
Q Consensus 408 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~----------~~g~~~~~~ 477 (514)
++.....++.+++.....|...+++.+..|++.||+.+|+......+|..++..+.+.... ..++...|.
T Consensus 383 ~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~ 462 (500)
T PRK09584 383 NWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFL 462 (500)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHH
Confidence 4667778888999999999999999999999999999997776666666666555542210 112345566
Q ss_pred HHHHHHHHHHHHhhccc
Q 010268 478 LFELVILLSGISVLLFP 494 (514)
Q Consensus 478 ~~~~~~~~~~~~~~~~~ 494 (514)
..++++++.+++.+...
T Consensus 463 ~~~~~~~~~a~~~~~~~ 479 (500)
T PRK09584 463 QIGIATAVIAVLMLLTA 479 (500)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 66665555554444433
No 98
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.94 E-value=1.3e-23 Score=201.13 Aligned_cols=371 Identities=17% Similarity=0.179 Sum_probs=251.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhC-ChHHHHHHHHHHHHHHHHHhhhh
Q 010268 37 GWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFG-RRKGFLITAIVTSAAGLLSAFAP 115 (514)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G-~r~~l~~~~~~~~~~~~~~~~~~ 115 (514)
.+++.++....+.|..|.+.++.|.|..|+|.+.++..+...++++++|.++||++ +|+.+.+..++.++......+.+
T Consensus 10 ~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~ 89 (400)
T PF03825_consen 10 MYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSS 89 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34666667777888899999999999999999999999999999999999999986 57777777777777777777888
Q ss_pred hHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHH-HHHHhcccc---hHHHHHHhHH
Q 010268 116 NYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGI-AWLVMPRLG---WRWLLGLSAF 190 (514)
Q Consensus 116 ~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i-~~~l~~~~g---w~~~f~~~~~ 190 (514)
+++.++...++..+..... |...++..+... +++.-.|-.....++|.+++... ++.+....+ ....+++.+.
T Consensus 90 ~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 167 (400)
T PF03825_consen 90 SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAI 167 (400)
T ss_pred cHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHH
Confidence 8988888888888776655 666677766654 34455666677777787777544 233333222 2345566665
Q ss_pred HHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCC
Q 010268 191 PSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDE 270 (514)
Q Consensus 191 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (514)
..++.....+.+|+.|+.. +.+. +.++
T Consensus 168 ~~~ll~~~~l~lp~~~~~~--~~~~-~~~~-------------------------------------------------- 194 (400)
T PF03825_consen 168 LSLLLAGFALFLPKTPPKR--SAKE-SVKK-------------------------------------------------- 194 (400)
T ss_pred HHHHHHHHHHhCCCCcccc--ccCC-Cccc--------------------------------------------------
Confidence 5555555566778765210 0000 0000
Q ss_pred CchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCC
Q 010268 271 DSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSG 350 (514)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (514)
........+++++....+++..... .........+.+.+.++.+ +
T Consensus 195 -----------------------~~~~~~~~llk~~~~~~Fll~~~l~---~~~~~~~~~f~~~yl~~~g---------g 239 (400)
T PF03825_consen 195 -----------------------LLGLDALKLLKNPRFLVFLLAAFLI---GISHAAYYTFFSIYLQELG---------G 239 (400)
T ss_pred -----------------------ccchHHHHHhcCccHHHHHHHHHHH---HHHHHHHHHHHHHHHHHcc---------c
Confidence 0000222344443333333322222 2222222233333333221 1
Q ss_pred CcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcc-cCcchhHHHH----HHHHhhhcccc
Q 010268 351 KSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQ-QPKGLTTGLL----FGARICITVTF 425 (514)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~g~~~~~~~ 425 (514)
.+....+...++..+++++.....+++.+|+|.++++.++.+..++-..++... ++.+...... .+.|++.+...
T Consensus 240 ~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~ 319 (400)
T PF03825_consen 240 YSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFH 319 (400)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHH
Confidence 344445667778889999999999999999999999999999999988888766 4444333333 35888999999
Q ss_pred cceeeccccccCcchhhHHHHHHHHHH-HHhHhHHHHHHHHHHhhcCchh------HHHHHHHHHHHHHHHhhcccccc
Q 010268 426 TVVYVYAPEIYPTSVRTTGVGVASSIG-RIGGMVCPLVAVALVHGCHQTA------ALILFELVILLSGISVLLFPFET 497 (514)
Q Consensus 426 ~~~~~~~~~~~p~~~~~~~~g~~~~~~-~~g~~~~p~i~g~l~~~~g~~~------~~~~~~~~~~~~~~~~~~~~~~~ 497 (514)
.....++.+.+|++.|+++.|+++... ++|..+|..++|++.|+.|... .+.+.+++.++..++.+++.|++
T Consensus 320 ~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 320 AASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 999999999999999999999998875 5999999999999999987553 23344444444444444444443
No 99
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.93 E-value=1.8e-23 Score=195.76 Aligned_cols=380 Identities=13% Similarity=0.108 Sum_probs=247.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhh-cCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHH--HHH-HH
Q 010268 34 AGMGWISEAMEMMLLSFVGPAVQSL-WHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVT--SAA-GL 109 (514)
Q Consensus 34 ~~l~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~--~~~-~~ 109 (514)
..+.++..++.+...-++.|.+.++ .|+|.+++|.+.++..+...+.+|+.|.++||+|.||-++..+.+. ..+ ..
T Consensus 12 ~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff 91 (412)
T PF01306_consen 12 LSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFF 91 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHH
Confidence 3344555666677777777877765 8999999999999999999999999999999999766554433222 222 22
Q ss_pred HHhhhhhH-HHHHHHHHHHhhhccc----h-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Q 010268 110 LSAFAPNY-YLLLFFRCLVGLGLGG----G-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRW 183 (514)
Q Consensus 110 ~~~~~~~~-~~l~~~r~l~G~~~g~----~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~ 183 (514)
...+.|-. ..+.++-++.|+..+. . ++.-+++.++. ++.+.-.|-...+.++|.+++..++|.+.+ .+-+.
T Consensus 92 ~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~ 168 (412)
T PF01306_consen 92 IYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFN-INPNI 168 (412)
T ss_dssp HHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeee-eCccH
Confidence 22333321 1122233333343333 2 34335554433 334555677888899999999999999886 46677
Q ss_pred HHHHhHHHHHHHHHHHHHc-cCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCC
Q 010268 184 LLGLSAFPSSLLLLLYSVT-PESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTT 262 (514)
Q Consensus 184 ~f~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (514)
.|++....+++..++.++. |+.++.....+..+.
T Consensus 169 ~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~--------------------------------------------- 203 (412)
T PF01306_consen 169 IFWIASAAAIILLLLLLLLKPDVPPQAEVADALGA--------------------------------------------- 203 (412)
T ss_dssp HHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS---------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHcCCcCchhhhhhccccc---------------------------------------------
Confidence 8887766666555444333 232210000000000
Q ss_pred ccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhhcC
Q 010268 263 PKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGL----VLLTTELNNG 338 (514)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 338 (514)
++++.+.+....+++. +.+|...+...+....|+.. ..+...+.+.
T Consensus 204 ---------------------------~~~~~~~~~~~~l~k~---~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~ 253 (412)
T PF01306_consen 204 ---------------------------KKDKVSLKDVLSLFKM---RNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQS 253 (412)
T ss_dssp ---------------------------------HHHHHHHTTS---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred ---------------------------CCCCCcHHHHHHHhcc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 0000001123344443 33333333333333333333 3333333322
Q ss_pred ccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHH
Q 010268 339 QNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGAR 418 (514)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 418 (514)
.+ .+....+...++..+.+++...+.+++.+|+|.|+.++++..++.+-.+...+.++++.....-.+.+
T Consensus 254 ~~----------~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~ 323 (412)
T PF01306_consen 254 AG----------QGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHA 323 (412)
T ss_dssp HH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHH
T ss_pred cc----------cChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHH
Confidence 22 44455588888999999999999999999999999999999999999999999999999888999999
Q ss_pred hhhcccccceeeccccccCcchhhHHHHHHH-HHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcccccc
Q 010268 419 ICITVTFTVVYVYAPEIYPTSVRTTGVGVAS-SIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFPFET 497 (514)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~-~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (514)
+..........-++.+.+|++..++...+.. ...++|.++.+.+.|.++|+.|...++++++.+.++..++..+..++.
T Consensus 324 ~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 324 LEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 9999888889999999999999999999864 556799999999999999999998899999998888888877777655
Q ss_pred cCcC
Q 010268 498 TGRG 501 (514)
Q Consensus 498 ~~~~ 501 (514)
++..
T Consensus 404 ~~~~ 407 (412)
T PF01306_consen 404 KKQI 407 (412)
T ss_dssp SSTT
T ss_pred Cccc
Confidence 5443
No 100
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.93 E-value=4.1e-23 Score=199.83 Aligned_cols=395 Identities=13% Similarity=0.065 Sum_probs=256.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhh----hhCChHHHHHH-HHHHHHHHHHH
Q 010268 37 GWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSD----NFGRRKGFLIT-AIVTSAAGLLS 111 (514)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~D----r~G~r~~l~~~-~~~~~~~~~~~ 111 (514)
..+...+.+.......+.+.+++|.+..+.+++..+..+...+.+|+.|+++| |+||||.++++ ....+++.+++
T Consensus 12 ~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll 91 (477)
T TIGR01301 12 VAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILI 91 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 33444555666667777788999999999999999999999999999999999 59999998774 66667777777
Q ss_pred hhhhhHH-----------------HHHHHHHHHhhhccch-hhHHHHHHhhcCCCch--hHHHHHHHHHHHHHHHHHHHH
Q 010268 112 AFAPNYY-----------------LLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNR--GFWMVIFQTFWTVGTILEAGI 171 (514)
Q Consensus 112 ~~~~~~~-----------------~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~~~~i 171 (514)
+++++.+ .++++-.+..++.... .+..++++|.+|+++| +.+.++.+...++|.++|+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~ 171 (477)
T TIGR01301 92 GFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAA 171 (477)
T ss_pred HhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776643 2223333444466655 5566899999998865 689999999999999999999
Q ss_pred HHHH--hccc-------------chHHHHHHhHHHHHHHHHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCC
Q 010268 172 AWLV--MPRL-------------GWRWLLGLSAFPSSLLLLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPS 235 (514)
Q Consensus 172 ~~~l--~~~~-------------gw~~~f~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (514)
+++. .+.+ +.|..|++.++..++..++ .+..+|.|... +++.+ ++ +.
T Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~--~~~~~--~~---~~---------- 234 (477)
T TIGR01301 172 GAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIG--SDDFI--NS---EA---------- 234 (477)
T ss_pred HHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCc--cccch--hh---hc----------
Confidence 8875 2211 5688999888877776554 56677765210 00000 00 00
Q ss_pred CCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHH
Q 010268 236 GNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLW 315 (514)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 315 (514)
++.++ .+. .+ .-..-++.+++ .-+..+.++
T Consensus 235 -------------------------------~~~~~-~~~-------~~---------~~~~i~~~~~~--mP~~m~~l~ 264 (477)
T TIGR01301 235 -------------------------------APPSK-HGE-------EA---------FFGELFGAFKY--LPRPVWILL 264 (477)
T ss_pred -------------------------------ccccc-cch-------hh---------hHHHHHHHHHH--CCHHHHHHH
Confidence 00000 000 00 00001222222 123444455
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc-CccccccccccCCCccc--CcccchhhhhhchhhHHHHHHHHHHHHhh-HHHHHHHH
Q 010268 316 LVFFGNAFSYYGLVLLTTELNN-GQNKCVSNELQSGKSRD--INYGDVFITSFAEFPGLLLAAAMVDRLGR-KLSMSSMF 391 (514)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~g~l~dr~g~-~~~~~~~~ 391 (514)
...++..+.++.+..|.+.+.. +..+..+.. +..+... ...+...++.+...+.+++..++.+|+|+ |....++.
T Consensus 265 ~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~-~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~ 343 (477)
T TIGR01301 265 LVTCLNWIAWFPFILFDTDWMGREVYGGSVNQ-GAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVN 343 (477)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHcCCCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 5555555555555444444332 111111100 0001000 12334455566666777888899999985 66667887
Q ss_pred HHHHHHhhhhhcccC---------------------cchhHHHHHHHHhhhcccccceeeccccccCc--chhhHHHHHH
Q 010268 392 FCCCIFLVPLLFQQP---------------------KGLTTGLLFGARICITVTFTVVYVYAPEIYPT--SVRTTGVGVA 448 (514)
Q Consensus 392 ~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~--~~~~~~~g~~ 448 (514)
++.++++....+..+ .+...+...+.|+.....+...++++++..|+ +..|..+|+.
T Consensus 344 ~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgil 423 (477)
T TIGR01301 344 IILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVL 423 (477)
T ss_pred HHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHH
Confidence 777776666553221 25566677788888999999999999999994 4569999999
Q ss_pred HHHHHHhHhHHHHHHHHHHhhcCc--hhHHHHHHHHHHHHHHHhhcccccccC
Q 010268 449 SSIGRIGGMVCPLVAVALVHGCHQ--TAALILFELVILLSGISVLLFPFETTG 499 (514)
Q Consensus 449 ~~~~~~g~~~~p~i~g~l~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (514)
|.+..+.+.+..+..|.+.+..|. ...+.+.++..++++++..+..|+++.
T Consensus 424 N~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 424 NLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999987776663 345666677777888888888777654
No 101
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.92 E-value=5.2e-22 Score=194.60 Aligned_cols=404 Identities=18% Similarity=0.139 Sum_probs=250.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhh
Q 010268 34 AGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAF 113 (514)
Q Consensus 34 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~ 113 (514)
+++.....++.....+.+++.+..|+|-+ ....|+.+...++.++..++.|+++|.||||..++.+.++..+|.+.++.
T Consensus 49 ~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~at 127 (599)
T PF06609_consen 49 FSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCAT 127 (599)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhc
Confidence 33344444555555567788999999876 56788999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHhhhccchhhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHH
Q 010268 114 APNYYLLLFFRCLVGLGLGGGPVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSS 193 (514)
Q Consensus 114 ~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~ 193 (514)
++|...++.+..+.|+|.|........++|..|.|.|+...++.....-.....++.++..+..+.+|||.|++..+...
T Consensus 128 A~~~~~~iag~~l~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~ 207 (599)
T PF06609_consen 128 AQNMNTFIAGMVLYGVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSG 207 (599)
T ss_pred CCcHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHH
Confidence 99999999999999999877765666689999999999888877766666666788888777767799999999988877
Q ss_pred HHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCch
Q 010268 194 LLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSI 273 (514)
Q Consensus 194 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (514)
+.+++.++.-.+|++...+++....++.++++.-...--.... .......+..-. ..+..+ +....-.
T Consensus 208 i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~G--l~LfLlgl~wgG-----~~~~~W-----~Sa~VIa 275 (599)
T PF06609_consen 208 IALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAG--LALFLLGLSWGG-----YPYYPW-----KSAHVIA 275 (599)
T ss_pred HHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHH--HHHHHHHHhccC-----CCCCCC-----CCccchh
Confidence 7655533332233332222222112222222211000000000 000000000000 000000 0000000
Q ss_pred hH-----------hhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccc
Q 010268 274 SE-----------AKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKC 342 (514)
Q Consensus 274 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (514)
.- -.|... ..+...-+.+ +++++ |.+.......+.....++....+.|........
T Consensus 276 ~lviG~~~Lv~F~~wE~~~---------~~~~Pl~P~~-Lf~~~--r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~- 342 (599)
T PF06609_consen 276 PLVIGFVLLVAFVVWEWFG---------APKDPLFPHR-LFKDR--RGFAALLVISFISGMNFFSVNILWPQQVVNVFG- 342 (599)
T ss_pred hHHHHHHHHHHHHHhhhhc---------cCCCCcCCHH-Hhccc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-
Confidence 00 000000 0000111222 33321 334444455555666677766666654422210
Q ss_pred ccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHH-HHHHHHHHHHHHhhhhhc--ccCcchhHHHHHHHHh
Q 010268 343 VSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKL-SMSSMFFCCCIFLVPLLF--QQPKGLTTGLLFGARI 419 (514)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~ 419 (514)
....+....++.....+++..+|..+.|.+..++++-| .++++.+++.+++..+.. .++....+...++.++
T Consensus 343 -----~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~ 417 (599)
T PF06609_consen 343 -----SDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGF 417 (599)
T ss_pred -----CCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHH
Confidence 00011123456666778888889899999998887554 444555555444333432 3344455667778888
Q ss_pred hhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHh
Q 010268 420 CITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVH 468 (514)
Q Consensus 420 ~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~ 468 (514)
+.+..........+-..|++..|++.|+...+..+|+.+|..+...+..
T Consensus 418 giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~ 466 (599)
T PF06609_consen 418 GIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFT 466 (599)
T ss_pred hHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 8888777777777788999999999999999999999999988877653
No 102
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.92 E-value=4.3e-23 Score=203.68 Aligned_cols=370 Identities=12% Similarity=0.051 Sum_probs=244.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhC-----ChHHHHHHH
Q 010268 27 QLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFG-----RRKGFLITA 101 (514)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G-----~r~~l~~~~ 101 (514)
+...+.++...++..+........+.|.+.+++|+|+++++...+...+...+-. ++|+++||++ ||+.++++.
T Consensus 24 ~~~~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~-l~g~l~D~~~i~G~rRr~~l~~~~ 102 (468)
T TIGR00788 24 PRVVLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKP-FAGVMSDTFPLFGYTKRWYLVLSG 102 (468)
T ss_pred cchHHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCCccchHHHHHHH
Confidence 3445556666778888874445555667777899999999999999999988854 5999999997 777777777
Q ss_pred HHH-HHHHHHHhhhhhHHHHH-HHHHHHhhhccch-hhHHHHHHhhcCCCchhHHH---HHHHHHHHHHHHHHHHHHHHH
Q 010268 102 IVT-SAAGLLSAFAPNYYLLL-FFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWM---VIFQTFWTVGTILEAGIAWLV 175 (514)
Q Consensus 102 ~~~-~~~~~~~~~~~~~~~l~-~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~---~~~~~~~~~G~~~~~~i~~~l 175 (514)
++. +++...++..++..... +.+++.+++.+.. .+..++..|..+ ++++... ++.....++|.++++.+++.+
T Consensus 103 ~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l 181 (468)
T TIGR00788 103 LLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPL 181 (468)
T ss_pred HHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHH
Confidence 766 34444444445544444 4788999998888 666699999888 4444433 333344558999999999999
Q ss_pred hcccchHHHHHHhHHHHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCC
Q 010268 176 MPRLGWRWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSS 255 (514)
Q Consensus 176 ~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (514)
.+.++|+..|++.+++.++..+..++++|++.....+.++++ ........
T Consensus 182 ~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~-~~~~~~~~----------------------------- 231 (468)
T TIGR00788 182 LDKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYL-EMNMALLT----------------------------- 231 (468)
T ss_pred HHhcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccc-hhhhhhhh-----------------------------
Confidence 999999999999888887776667777875310000000000 00000000
Q ss_pred CCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChh-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010268 256 SNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPE-LIKSTLLLWLVFFGNAFSYYGLVLLTTE 334 (514)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (514)
....+ . .+......+..++++ .++.....++.+.. ........+
T Consensus 232 ---------------~~~~~---~------------~~~~~~~l~~~l~~~~i~~~l~fifl~~~~--~~~~~~~~f--- 276 (468)
T TIGR00788 232 ---------------LGVLA---N------------VKVQILGLRGAIQLLEIAKPLIFIFLSYAN--LPGASGSVF--- 276 (468)
T ss_pred ---------------hhHHH---H------------HHHHHHHHHHHHhcHHHHHHHHHHHHHHhh--cCCCCceeE---
Confidence 00000 0 000011222223332 22222222220110 000000000
Q ss_pred hhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcc----------
Q 010268 335 LNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQ---------- 404 (514)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~---------- 404 (514)
+. +....+.++...+......+++.+++..+.+++.+|++.|+++.++.++.+++.+.....
T Consensus 277 ~~--------~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi 348 (468)
T TIGR00788 277 CA--------TTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGI 348 (468)
T ss_pred EE--------EcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCC
Confidence 00 001245888888999999999999999999999999999999999988888766443210
Q ss_pred cCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcC
Q 010268 405 QPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCH 471 (514)
Q Consensus 405 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g 471 (514)
.+.+.......+.+++.+..+.....++++..|++.+|+.+++.+.+.++|..+++.++|.+.++.|
T Consensus 349 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 349 SDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred CCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 2223344455667777777778889999999999999999999999999999999999999999887
No 103
>PRK09669 putative symporter YagG; Provisional
Probab=99.91 E-value=6.9e-22 Score=195.44 Aligned_cols=333 Identities=13% Similarity=0.047 Sum_probs=218.0
Q ss_pred HHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhh----hCC-hHHHHHHHHHHHHHHHHHhhhhh------
Q 010268 48 LSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDN----FGR-RKGFLITAIVTSAAGLLSAFAPN------ 116 (514)
Q Consensus 48 ~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr----~G~-r~~l~~~~~~~~~~~~~~~~~~~------ 116 (514)
...+.+.+.+++|+|+.++|.+.++..+..++..|+.|+++|| +|| |+.++.+....+++..+....++
T Consensus 29 ~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~ 108 (444)
T PRK09669 29 MLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGK 108 (444)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchH
Confidence 3445667888899999999999999999999999999999998 777 45566777777777665554442
Q ss_pred HHHHHHHHHHHhhhccch-hhHHHHHHhhc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc-------ccchHHHHHH
Q 010268 117 YYLLLFFRCLVGLGLGGG-PVLASWFLEFI-PAPNRGFWMVIFQTFWTVGTILEAGIAWLVMP-------RLGWRWLLGL 187 (514)
Q Consensus 117 ~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~-------~~gw~~~f~~ 187 (514)
+..+++..++.+.+.... .+..++..|+. ++++|++..++...+..+|..+++.+...+.. ..+|+..+.+
T Consensus 109 ~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i 188 (444)
T PRK09669 109 IIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMV 188 (444)
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHH
Confidence 455666666667666665 44457888988 56789999899888888888887765544332 2468888877
Q ss_pred hHHHHHHHHHHHH-HccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCcccc
Q 010268 188 SAFPSSLLLLLYS-VTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEM 266 (514)
Q Consensus 188 ~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (514)
.+++.++..+..+ ..+|.++. .+.+
T Consensus 189 ~~ii~~v~~~~~~~~~~e~~~~----~~~~-------------------------------------------------- 214 (444)
T PRK09669 189 MGLLGVVLFFCCFFMTKERYTP----EVDN-------------------------------------------------- 214 (444)
T ss_pred HHHHHHHHHHHHhCCeEEecCC----CCcC--------------------------------------------------
Confidence 7777666544433 23332100 0000
Q ss_pred ccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccc
Q 010268 267 ARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNE 346 (514)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (514)
.....+.++.+++++.++.+....+........ ......++.+...
T Consensus 215 -------------------------~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~---~~~~~~y~~~~~~------ 260 (444)
T PRK09669 215 -------------------------SSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVT---RGGATLYYVNYVL------ 260 (444)
T ss_pred -------------------------CCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHH---Hhhhhheeeeeec------
Confidence 000112455566655444443332222111111 1112222221111
Q ss_pred ccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhh-c-ccCcchhHHHHHHHHhhhccc
Q 010268 347 LQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLL-F-QQPKGLTTGLLFGARICITVT 424 (514)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~g~~~~~~ 424 (514)
..++..........+..+++.++.+++.||+|+|+....+.++.++..+.+. . ..+.+...+..++.+++.+..
T Consensus 261 ----~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 336 (444)
T PRK09669 261 ----LRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLT 336 (444)
T ss_pred ----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHH
Confidence 1122223444455677788888999999999999988877765554333222 2 234445566667788888888
Q ss_pred ccceeeccccccC-------cchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCc
Q 010268 425 FTVVYVYAPEIYP-------TSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQ 472 (514)
Q Consensus 425 ~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~ 472 (514)
.+..+++++|..+ .+..|..+|+.+.+..+|..++|.+.|.+.+..|+
T Consensus 337 ~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 337 TPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8999999988875 33457788999999999999999999999998775
No 104
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.90 E-value=1.8e-20 Score=182.96 Aligned_cols=347 Identities=15% Similarity=0.141 Sum_probs=235.9
Q ss_pred hhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHH-HHHHHHHHHHHhhh-hh-HHHHHHHHHHHhhhccch-hhHHHH
Q 010268 65 QESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLIT-AIVTSAAGLLSAFA-PN-YYLLLFFRCLVGLGLGGG-PVLASW 140 (514)
Q Consensus 65 ~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~-~~~~~~~~~~~~~~-~~-~~~l~~~r~l~G~~~g~~-~~~~~~ 140 (514)
..++..++..+..++..|+.|.++|+-|+||.++.. ..+..+...++.+. ++ ++...+.-++.-++.+.. ....++
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457788899999999999999999999977665544 45555566666664 33 333333444444455555 344489
Q ss_pred HHhhcCCCch--------------------------hHHHHHHHHHHHHHHHHHHHHHHHHhc--------ccchHHHHH
Q 010268 141 FLEFIPAPNR--------------------------GFWMVIFQTFWTVGTILEAGIAWLVMP--------RLGWRWLLG 186 (514)
Q Consensus 141 i~~~~~~~~r--------------------------~~~~~~~~~~~~~G~~~~~~i~~~l~~--------~~gw~~~f~ 186 (514)
+.|..+++++ ++..+.-.+...+|.++.-.+...+.. ..+.|..+.
T Consensus 151 LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~ 230 (477)
T PF11700_consen 151 LPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFL 230 (477)
T ss_pred hHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHH
Confidence 9999998888 999999888888998887777655432 123588888
Q ss_pred HhHHHHHHH-HHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccc
Q 010268 187 LSAFPSSLL-LLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKE 265 (514)
Q Consensus 187 ~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (514)
+.++.-++. +...+++||.|+....+..........+++.+
T Consensus 231 ~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~-------------------------------------- 272 (477)
T PF11700_consen 231 IVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWR-------------------------------------- 272 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHH--------------------------------------
Confidence 877766555 45567788876421111111112222222211
Q ss_pred cccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccc
Q 010268 266 MARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSN 345 (514)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (514)
.++++.+. +.+....+.+++..-....+..+...+..+.
T Consensus 273 --------------------------------t~k~~~~~---~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~------ 311 (477)
T PF11700_consen 273 --------------------------------TFKEIRKL---RQLFLFLIAYFLYSDGVNTIISFAGIYATEV------ 311 (477)
T ss_pred --------------------------------HHHHHHhC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------
Confidence 33333333 3333333344433333333444444443311
Q ss_pred cccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhH--HHHHHHHHHHHHHhhhhhc--------ccCcchhHHHHH
Q 010268 346 ELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRK--LSMSSMFFCCCIFLVPLLF--------QQPKGLTTGLLF 415 (514)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~--~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ 415 (514)
.+++..+......+..+.+++|.++.|++.||+|.| +++..+.+...+..+.-.+ ..+.+..+++.+
T Consensus 312 ---lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~ 388 (477)
T PF11700_consen 312 ---LGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAV 388 (477)
T ss_pred ---cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHH
Confidence 237777777788888999999999999999999988 7777666655333322222 456678888899
Q ss_pred HHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcC-chhHHHHHHHHHHHHHHHhhcc
Q 010268 416 GARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCH-QTAALILFELVILLSGISVLLF 493 (514)
Q Consensus 416 ~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 493 (514)
+.|++.+..++..-++.+|+.|+++.+..+|++...+...+.+||++.|.+.+..| ....+....++.+++.++....
T Consensus 389 ~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 389 LIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred HHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999988 4455555555555555555433
No 105
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.90 E-value=6e-20 Score=178.70 Aligned_cols=166 Identities=14% Similarity=0.108 Sum_probs=130.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh-hhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhh-CChHHHHHHHHHHHHHHHHH
Q 010268 34 AGMGWISEAMEMMLLSFVGPAV-QSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNF-GRRKGFLITAIVTSAAGLLS 111 (514)
Q Consensus 34 ~~l~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~-G~r~~l~~~~~~~~~~~~~~ 111 (514)
++...+...+..+.+...+|.+ .+++|++..+.+.+.+.+.....++.+++|+++||+ ||||+++++.++..++.+++
T Consensus 14 l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll 93 (493)
T PRK15462 14 VVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVL 93 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHH
Confidence 3334444555555555555554 567899999999999999999999999999999999 99999999999999998777
Q ss_pred hhhh-hHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCC--chhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Q 010268 112 AFAP-NYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAP--NRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGL 187 (514)
Q Consensus 112 ~~~~-~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~ 187 (514)
++.+ +...+++...+.+++.|.. +...+++.|.+|++ +|..++++.+.+.++|..++|.+.+++.+.+||+..|.+
T Consensus 94 ~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~i 173 (493)
T PRK15462 94 GASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGL 173 (493)
T ss_pred HHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHH
Confidence 6543 2233444445555667776 66678999999875 699999999999999999999999999998999999998
Q ss_pred hHHHHHHHHHHH
Q 010268 188 SAFPSSLLLLLY 199 (514)
Q Consensus 188 ~~~~~~i~~~~~ 199 (514)
.++..++.++.+
T Consensus 174 aaigm~l~li~~ 185 (493)
T PRK15462 174 AAVGMIAGLVIF 185 (493)
T ss_pred HHHHHHHHHHHH
Confidence 776555444443
No 106
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.89 E-value=2.2e-21 Score=192.93 Aligned_cols=349 Identities=11% Similarity=0.020 Sum_probs=220.8
Q ss_pred HHHHHHHHHHHHHH-HHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhh----hhCC-hHHHHHHHHHHHHHHHH
Q 010268 37 GWISEAMEMMLLSF-VGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSD----NFGR-RKGFLITAIVTSAAGLL 110 (514)
Q Consensus 37 ~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~D----r~G~-r~~l~~~~~~~~~~~~~ 110 (514)
+.+...+....... +..++.+.+|+++.++|.+..+..+..++..|+.|.++| |+|| |+.++.+....+++..+
T Consensus 14 g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~l 93 (473)
T PRK10429 14 GAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFL 93 (473)
T ss_pred chhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHH
Confidence 33333443444444 455667778999999999999999999999999999999 6698 66677788887777666
Q ss_pred Hhhhh------hHHHHHHHHHHHhhhccch-hhHHHHHHhhc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc-----
Q 010268 111 SAFAP------NYYLLLFFRCLVGLGLGGG-PVLASWFLEFI-PAPNRGFWMVIFQTFWTVGTILEAGIAWLVMP----- 177 (514)
Q Consensus 111 ~~~~~------~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~----- 177 (514)
+...+ .+..+++..++.+++.... .+..++..|.. ++++|.+..++...+.++|..+.+.+...+.+
T Consensus 94 lf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~ 173 (473)
T PRK10429 94 LFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGG 173 (473)
T ss_pred HHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 64433 1334555666777777777 44558889988 68899999999778778876666655443322
Q ss_pred --ccchHHHHHHhHHHHHHHHHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccC
Q 010268 178 --RLGWRWLLGLSAFPSSLLLLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSS 254 (514)
Q Consensus 178 --~~gw~~~f~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
..+|+....+.+++.++..+. .+..+|.+... +.+.++
T Consensus 174 ~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~--~~~~~~------------------------------------- 214 (473)
T PRK10429 174 DRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSD--NQVSAE------------------------------------- 214 (473)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHcCceecCCcc--cccccc-------------------------------------
Confidence 124666666666655554333 33344432100 000000
Q ss_pred CCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010268 255 SSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTE 334 (514)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (514)
+ +.......++.+++++.++.++. ..+......+....+.++
T Consensus 215 -------------~----------------------~~~~~~~~~~~~~~n~~~~~ll~---~~~~~~~~~~~~~~~~~y 256 (473)
T PRK10429 215 -------------G----------------------SHLTLKDIVALIYKNDQLSCLLG---MALAYNIASNIINGFAIY 256 (473)
T ss_pred -------------c----------------------cCCCHHHHHHHHhcCHHHHHHHH---HHHHHHHHHHHHhhheee
Confidence 0 00001114445555543333332 223333333333333444
Q ss_pred hhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhc-----ccCcch
Q 010268 335 LNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLF-----QQPKGL 409 (514)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 409 (514)
+.+... .+....+....+..++.+++.++.+++.||+|+|+.+..+..+.+++.+.+.. ..+.+.
T Consensus 257 ~~~y~~----------~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (473)
T PRK10429 257 YFTYVI----------GDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALL 326 (473)
T ss_pred EEEEEC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHH
Confidence 443221 22223344555666788899999999999999999988777665544433321 223344
Q ss_pred hHHHHHHHHhhhcccccceeeccccccC-------cchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCc
Q 010268 410 TTGLLFGARICITVTFTVVYVYAPEIYP-------TSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQ 472 (514)
Q Consensus 410 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~ 472 (514)
..+..++.+++.+...+..+++++|..+ .+..|..+|....+..++..+++.+.|.+.+..|+
T Consensus 327 ~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 327 IVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4555666777888888888888888865 34457799999999999999999999999987765
No 107
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.89 E-value=6.2e-23 Score=175.59 Aligned_cols=362 Identities=14% Similarity=0.077 Sum_probs=238.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhh-hCChHHHHHHHHHH
Q 010268 26 FQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDN-FGRRKGFLITAIVT 104 (514)
Q Consensus 26 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr-~G~r~~l~~~~~~~ 104 (514)
+|...++.+++..|..++.....+.+..+...+.+++.++..++.++|.....+.++++|++.|| +|.|..-++-+...
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv 120 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFV 120 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHH
Confidence 45555666666667777777777777888889999999999999999999999999999999996 68887766666666
Q ss_pred HHHHHHHh---hhhhHHHHHHHHHHHhhhccchhhH-HHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 010268 105 SAAGLLSA---FAPNYYLLLFFRCLVGLGLGGGPVL-ASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLG 180 (514)
Q Consensus 105 ~~~~~~~~---~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~g 180 (514)
.+|.++.+ ..+.+|.+.++|++.|+|.-...++ ..+...|+..|+.+.++|+......+|..+--.+.+++.+..+
T Consensus 121 ~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~ 200 (459)
T KOG4686|consen 121 FLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMG 200 (459)
T ss_pred HHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHH
Confidence 77776665 4678999999999999987766554 4899999999999999999999999998766555555544321
Q ss_pred h------HHHH---HHhHH-HHHHHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhh
Q 010268 181 W------RWLL---GLSAF-PSSLLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKS 250 (514)
Q Consensus 181 w------~~~f---~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (514)
- +... +.... .+...++....+- + ..+++++.+ +..++..
T Consensus 201 ~~~~~~ghT~LG~~l~~~~~tc~~slical~lg----~-----~D~rAeril---h~e~g~~------------------ 250 (459)
T KOG4686|consen 201 RMFPGVGHTLLGLWLCFEVKTCKQSLICALSLG----L-----SDDRAERIL---HLEEGFL------------------ 250 (459)
T ss_pred HhcccchHHHHHHHHHHHHHHHHHHHHHHHHhh----h-----hhhHHHHHH---hhhcCcc------------------
Confidence 0 1110 11111 1111111111110 0 001111111 1000000
Q ss_pred cccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010268 251 LLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVL 330 (514)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (514)
-++ + .+.+. +.+.+.+|.+..+.++.....+.+..
T Consensus 251 ------------Ge~-------------p------------------kLtdv--~~f~ppfw~~~iicv~yyva~fPFi~ 285 (459)
T KOG4686|consen 251 ------------GEE-------------P------------------KLTDV--NTFYPPFWVLVIICVLYYVAWFPFIT 285 (459)
T ss_pred ------------cCC-------------c------------------ccccc--cccCccHHHHHHHHHHHHHHHHHHhh
Confidence 000 0 00000 01113344444444444444444444
Q ss_pred HHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHh-hhhhcccCcch
Q 010268 331 LTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFL-VPLLFQQPKGL 409 (514)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 409 (514)
.-|.++++. .|.++..++...+.......+.+++.|.++||+|++...+.+..+..+.. ..+.+. .+.
T Consensus 286 lg~~fF~~r---------fGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--~ls 354 (459)
T KOG4686|consen 286 LGPMFFQKR---------FGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--FLS 354 (459)
T ss_pred hhHHHHHHh---------hCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh--hcc
Confidence 455554432 35888888888888888889999999999999999877665554443322 222222 222
Q ss_pred hHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCch
Q 010268 410 TTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQT 473 (514)
Q Consensus 410 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~ 473 (514)
.+..+.+.|...+......|..++.++|+++.|+++|.+..+.++|-.+.|.+.|.+.|+-|.+
T Consensus 355 Py~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y 418 (459)
T KOG4686|consen 355 PYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSY 418 (459)
T ss_pred HHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCch
Confidence 3455566666766666667888889999999999999999999999999999999999987743
No 108
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.89 E-value=5.7e-21 Score=187.99 Aligned_cols=333 Identities=19% Similarity=0.163 Sum_probs=240.7
Q ss_pred HHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhh----hhCChHH-HHHHHHHHHHHHHHHhhh-h-------
Q 010268 49 SFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSD----NFGRRKG-FLITAIVTSAAGLLSAFA-P------- 115 (514)
Q Consensus 49 ~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~D----r~G~r~~-l~~~~~~~~~~~~~~~~~-~------- 115 (514)
..+.+.+.+.+|+++..+|++..+..+..++..|+.|.++| |+||||. ++++..+.+++..++... |
T Consensus 22 ~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~ 101 (428)
T PF13347_consen 22 SYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTA 101 (428)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhh
Confidence 35567788888999999999999999999999999999999 8997655 667888888888877765 4
Q ss_pred hHHHHHHHHHHHhhhccch-hhHHHHHHhhcC-CCchhHHHHHHHHHHHHHHHHHHHHHHHHhccc-------chHHHHH
Q 010268 116 NYYLLLFFRCLVGLGLGGG-PVLASWFLEFIP-APNRGFWMVIFQTFWTVGTILEAGIAWLVMPRL-------GWRWLLG 186 (514)
Q Consensus 116 ~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~-------gw~~~f~ 186 (514)
....+.+..++..++.... .+..++..|..+ +++|.+..++...+..+|.++...+.+.+.+.. +|+....
T Consensus 102 ~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~ 181 (428)
T PF13347_consen 102 KLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMAL 181 (428)
T ss_pred HHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHH
Confidence 2334566667778887777 444588899986 578999999999999999877766666655322 5888888
Q ss_pred HhHHHHHHHHHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccc
Q 010268 187 LSAFPSSLLLLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKE 265 (514)
Q Consensus 187 ~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (514)
+.+++.++..++ .+..+|.++ +.++.+
T Consensus 182 v~~iv~~v~~~i~~~~~ke~~~------~~~~~~---------------------------------------------- 209 (428)
T PF13347_consen 182 VLAIVGLVFFLITFFFVKERSV------EVTEQE---------------------------------------------- 209 (428)
T ss_pred HHHHHHHHHhhhhhheeeeccc------cccccc----------------------------------------------
Confidence 888777776555 444555110 000000
Q ss_pred cccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhcCcccccc
Q 010268 266 MARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVF-FGNAFSYYGLVLLTTELNNGQNKCVS 344 (514)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (514)
+..+....++.+++++.++.++...+.. +..........++..+..
T Consensus 210 -------------------------~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl-------- 256 (428)
T PF13347_consen 210 -------------------------KKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVL-------- 256 (428)
T ss_pred -------------------------cccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHh--------
Confidence 0000111455666654444444333332 222222222233333333
Q ss_pred ccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhccc--CcchhHHHHHHHHhhhc
Q 010268 345 NELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQ--PKGLTTGLLFGARICIT 422 (514)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~ 422 (514)
...+..+....+..+..+++.++.+++.||+|+|+....+..+.+++.+.+.+.. +.+...+...+.|++.+
T Consensus 257 ------~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~ 330 (428)
T PF13347_consen 257 ------GNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYG 330 (428)
T ss_pred ------cCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhc
Confidence 2223445666677888999999999999999999999999999988887777654 77888888899999999
Q ss_pred ccccceeeccccccCc-------chhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCc
Q 010268 423 VTFTVVYVYAPEIYPT-------SVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQ 472 (514)
Q Consensus 423 ~~~~~~~~~~~~~~p~-------~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~ 472 (514)
..+...+++.+|..+. +..|..+|+.+....++..+++.+.|.+.+..|+
T Consensus 331 ~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 331 AFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred ccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 9999999999998863 4469999999999999999999999999887664
No 109
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.88 E-value=3.1e-20 Score=170.65 Aligned_cols=395 Identities=13% Similarity=0.072 Sum_probs=281.3
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHH
Q 010268 22 GFGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITA 101 (514)
Q Consensus 22 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~ 101 (514)
+.-++||.+++.+.+..+.+.+.+..+++...+...-+| +....-|..-+|.+.+....+++-|+.|++|-|...+++.
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 355789999998888899999999999998888888888 7778889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhh------hHH--HHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 010268 102 IVTSAAGLLSAFAP------NYY--LLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIA 172 (514)
Q Consensus 102 ~~~~~~~~~~~~~~------~~~--~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~ 172 (514)
.+.++|..+-..+. +++ ....+..+.+.++-.. ........-|+++++|..+..+-..+..+|.+++.++.
T Consensus 117 ~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llp 196 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLP 196 (480)
T ss_pred HHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcc
Confidence 99999998866552 344 5566777777777766 33345667899999999999999999999999998888
Q ss_pred HHHhccc------chHH--HHHHhHHHHHHHHHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchh
Q 010268 173 WLVMPRL------GWRW--LLGLSAFPSSLLLLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWE 243 (514)
Q Consensus 173 ~~l~~~~------gw~~--~f~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (514)
..+..+- .|.. .|+.......+.+++ .+..++.|+.+....+....
T Consensus 197 pilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~------------------------- 251 (480)
T KOG2563|consen 197 PILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ------------------------- 251 (480)
T ss_pred ceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh-------------------------
Confidence 8776543 3554 355444444443333 33334433321110000000
Q ss_pred hhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHH
Q 010268 244 HELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAF 323 (514)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 323 (514)
+.....+++..+++ +.+++..+.+.....
T Consensus 252 ------------------------------------------------~~~f~~si~~~~~n---~~F~il~~~ygi~~g 280 (480)
T KOG2563|consen 252 ------------------------------------------------DASFPKSIKSCFKN---RQFIILAICYGIGLG 280 (480)
T ss_pred ------------------------------------------------cCcHHHHHHHHHcC---ccHHHHHHHHhhhHH
Confidence 00112256666665 455666666666666
Q ss_pred HHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHH-HHHHHHHHHHHH-hhhh
Q 010268 324 SYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKL-SMSSMFFCCCIF-LVPL 401 (514)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~-~~~~~~~~~~~~-~~~~ 401 (514)
.+++....+....... +.+...++....+..+++++++++.|.+.||.+.-+ ..++......++ +.+.
T Consensus 281 ~F~~l~~~l~~~l~~s----------gY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~ 350 (480)
T KOG2563|consen 281 LFNSLSTLLNLALCPS----------GYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLL 350 (480)
T ss_pred HHHHHHHHhhhccccc----------cCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 6777666665333322 255667788999999999999999999999986543 344444443333 2222
Q ss_pred h---cccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcC----chh
Q 010268 402 L---FQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCH----QTA 474 (514)
Q Consensus 402 ~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g----~~~ 474 (514)
. .....+.......+.|++..+.+|+..-+..|..-|..-++..|+.+..+++.+++-.++.+...+..+ +..
T Consensus 351 ~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~ 430 (480)
T KOG2563|consen 351 TCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFP 430 (480)
T ss_pred HhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCcc
Confidence 2 223345667778888999999999999999999877888999999999999999999999999888776 555
Q ss_pred HHHHHHHHHHHHHHHhhcccccccCcCCC
Q 010268 475 ALILFELVILLSGISVLLFPFETTGRGLS 503 (514)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (514)
..+.....+.+..++..++++..|+++.+
T Consensus 431 ~~i~~~~~~~l~~~lva~~r~~y~R~~~e 459 (480)
T KOG2563|consen 431 ANIFLTVSALLGAILVAFFRPDYRRLRAE 459 (480)
T ss_pred chhHhHHHHHHHHHHHhhhhhhHHhHhhh
Confidence 55566666666666666666554444433
No 110
>PRK11462 putative transporter; Provisional
Probab=99.86 E-value=2.4e-19 Score=177.00 Aligned_cols=331 Identities=10% Similarity=-0.003 Sum_probs=209.5
Q ss_pred HHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhh----hCChH-HHHHHHHHHHHHHHHHhhhhh------H
Q 010268 49 SFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDN----FGRRK-GFLITAIVTSAAGLLSAFAPN------Y 117 (514)
Q Consensus 49 ~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr----~G~r~-~l~~~~~~~~~~~~~~~~~~~------~ 117 (514)
..+...+.+.+|+++..+|.+..+.-+.-++..|+.|.++|| +|||| .++++....+++..++...|+ .
T Consensus 30 ~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~ 109 (460)
T PRK11462 30 LYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKM 109 (460)
T ss_pred HHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHH
Confidence 345566778899999999999999999999999999999995 68854 566677777777776655442 3
Q ss_pred HHHHHHHHHHhhhccchh-hHHHHHHhhcC-CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcc-------cchHHHHHHh
Q 010268 118 YLLLFFRCLVGLGLGGGP-VLASWFLEFIP-APNRGFWMVIFQTFWTVGTILEAGIAWLVMPR-------LGWRWLLGLS 188 (514)
Q Consensus 118 ~~l~~~r~l~G~~~g~~~-~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~-------~gw~~~f~~~ 188 (514)
..+++..++..++..... +..++..|..+ +++|.+..++...+..+|..+++.+...+... .+|+....+.
T Consensus 110 ~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~ 189 (460)
T PRK11462 110 IYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVL 189 (460)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence 445566667777777774 44478888885 78899999999999999988887776554432 2577766666
Q ss_pred HHHHHHHHHHHHH-ccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccc
Q 010268 189 AFPSSLLLLLYSV-TPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMA 267 (514)
Q Consensus 189 ~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (514)
+++.++..++.+. .+|.++. +.++.
T Consensus 190 ~ii~~i~~~i~~~~~kE~~~~---~~~~~--------------------------------------------------- 215 (460)
T PRK11462 190 SVVAFMMLAFCFFTTKERVEA---PPTTT--------------------------------------------------- 215 (460)
T ss_pred HHHHHHHHHHHHhcceeccCC---CccCC---------------------------------------------------
Confidence 6665555444332 3332110 00000
Q ss_pred cCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccc
Q 010268 268 RDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNEL 347 (514)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (514)
...+.++..++++.++.+....+..........+...+...+. .
T Consensus 216 --------------------------~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~---~------- 259 (460)
T PRK11462 216 --------------------------SMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWI---L------- 259 (460)
T ss_pred --------------------------CHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhh---c-------
Confidence 0011445555555555444333333322222222222222222 0
Q ss_pred cCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccC--cchhHHHHHHHHhhhcccc
Q 010268 348 QSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQP--KGLTTGLLFGARICITVTF 425 (514)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~ 425 (514)
...+..+.......++.+++.++++++.||+++|+....+..+.++..+.+.+.+. .+...+..++.+++.+...
T Consensus 260 ---g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 336 (460)
T PRK11462 260 ---GTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVT 336 (460)
T ss_pred ---CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHH
Confidence 11222234556677888899999999999999998876544433332222222222 2233344455566665656
Q ss_pred cceeeccccccC-------cchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCc
Q 010268 426 TVVYVYAPEIYP-------TSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQ 472 (514)
Q Consensus 426 ~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~ 472 (514)
+..+++..|..+ .+..|..++.......+|..+++.+.|.+.+..|+
T Consensus 337 ~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 337 PIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 666667776655 33446667777788889999999999999887654
No 111
>PRK09848 glucuronide transporter; Provisional
Probab=99.86 E-value=1.2e-19 Score=179.79 Aligned_cols=344 Identities=11% Similarity=-0.001 Sum_probs=204.1
Q ss_pred HHHHHHHHHHHH-HHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhh----CChHHH-HHHHHHHHHHHHH
Q 010268 37 GWISEAMEMMLL-SFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNF----GRRKGF-LITAIVTSAAGLL 110 (514)
Q Consensus 37 ~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~----G~r~~l-~~~~~~~~~~~~~ 110 (514)
+.+......... ..+.+++.+.+|+++.++|.+.+...+..++..++.|+++||. ||||.. +.+.+...+...+
T Consensus 16 g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~ 95 (448)
T PRK09848 16 GDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVL 95 (448)
T ss_pred chHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHH
Confidence 333333333333 3444567777899999999999999999999999999999996 777654 5555544443333
Q ss_pred H-hh----hh--hHHHHHHHHHHHhhhccch-hhHHHHHHhhc-CCCchhHHHHHHHHHHH-----HHHHHHHHHHHHHh
Q 010268 111 S-AF----AP--NYYLLLFFRCLVGLGLGGG-PVLASWFLEFI-PAPNRGFWMVIFQTFWT-----VGTILEAGIAWLVM 176 (514)
Q Consensus 111 ~-~~----~~--~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~-~~~~r~~~~~~~~~~~~-----~G~~~~~~i~~~l~ 176 (514)
. .. .+ ....+++..++.+++.+.. ++..++..+.. ++++|.+..++...+.+ ++..++|.+++...
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g 175 (448)
T PRK09848 96 VFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSP 175 (448)
T ss_pred HHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 2 21 11 1233444556677777776 45556666655 44678888777655433 44555665555432
Q ss_pred ccc--chHHHHHHhHHHHHHHHHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhccc
Q 010268 177 PRL--GWRWLLGLSAFPSSLLLLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLS 253 (514)
Q Consensus 177 ~~~--gw~~~f~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (514)
... +|.....+.+++.++..+. ....+|++.. +.++
T Consensus 176 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~---~~~~-------------------------------------- 214 (448)
T PRK09848 176 EEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVR---IVAQ-------------------------------------- 214 (448)
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCC---CccC--------------------------------------
Confidence 111 1211112222222222221 2223332110 0000
Q ss_pred CCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010268 254 SSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTT 333 (514)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (514)
......++.+++++.... ..+..++....+.......+
T Consensus 215 ---------------------------------------~~~~~~~~~l~~n~~f~~---~~~~~~~~~~~~~~~~~~~~ 252 (448)
T PRK09848 215 ---------------------------------------PSLKISLQTLKRNRPLFM---LCIGALCVLISTFAVSASSL 252 (448)
T ss_pred ---------------------------------------CCHHHHHHHHhCCchHHH---HHHHHHHHHHHHHHHhhhhe
Confidence 000114555666543332 33333333333344444455
Q ss_pred HhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhccc--CcchhH
Q 010268 334 ELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQ--PKGLTT 411 (514)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 411 (514)
++.++.. +.++....+......++.+++.++.+++.||+|+|+.+..+.++.+++.+.+.+.+ +.+...
T Consensus 253 ~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~ 323 (448)
T PRK09848 253 FYVRYVL---------NDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVAL 323 (448)
T ss_pred eeEeeec---------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHH
Confidence 5553321 13332223333333566778889999999999999999988888777666655432 334444
Q ss_pred HHHHHHHhhhcccccceeeccccccCcc-------hhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCc
Q 010268 412 GLLFGARICITVTFTVVYVYAPEIYPTS-------VRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQ 472 (514)
Q Consensus 412 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~-------~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~ 472 (514)
+..++.+++.+...+...++.+|..|.+ ..|..+|+.+....+|..+++.+.|.+.+..|+
T Consensus 324 ~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 324 VALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5566777888888888888888887643 459999999999999999999999999887664
No 112
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.86 E-value=9.8e-20 Score=169.83 Aligned_cols=277 Identities=13% Similarity=0.091 Sum_probs=198.5
Q ss_pred hhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcc-------------
Q 010268 113 FAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPR------------- 178 (514)
Q Consensus 113 ~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~------------- 178 (514)
...+++.+++.-++.|.|.+.. +..++++++..+++++++.+++.+.+.++|..++|.+++.+...
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 4568999999999999999998 88889999999999999999999999999999999999987732
Q ss_pred ---cchHHHHHHhHHHHHHHHHHHHHc--cCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhccc
Q 010268 179 ---LGWRWLLGLSAFPSSLLLLLYSVT--PESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLS 253 (514)
Q Consensus 179 ---~gw~~~f~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (514)
.+|+.+|++.+.+.++..+++.+. ||.++ ++.++..
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~-----~~~~~~~---------------------------------- 126 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE-----ADVARVS---------------------------------- 126 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc-----ccccccc----------------------------------
Confidence 379999997776655555554444 33210 0000000
Q ss_pred CCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010268 254 SSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTT 333 (514)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (514)
++ +.. ..+.+++. +.+++..+..+++.....+...|.+
T Consensus 127 --------------~~--------~~~-----------------~~~~~~~~---~~~~l~~~~~f~yvg~e~~~~~w~~ 164 (310)
T TIGR01272 127 --------------SG--------DTT-----------------QKTSAFQF---THLVLGALGIFVYVGAEVSAGSFLV 164 (310)
T ss_pred --------------cc--------ccc-----------------chhhHHhh---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000 00011111 3334444555555556666777788
Q ss_pred HhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHH
Q 010268 334 ELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGL 413 (514)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (514)
.|..+.. ..+.++..++...+.+..+.++|+++++++.||+++|+.+.++..+.++..++....++ ......
T Consensus 165 ~yl~~~~-------~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~-~~~~~~ 236 (310)
T TIGR01272 165 NFLSDPH-------ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHG-YVAMWF 236 (310)
T ss_pred HHHHhcc-------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCC-HHHHHH
Confidence 7775321 12477777888899999999999999999999999998888877777766655544433 333445
Q ss_pred HHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHH
Q 010268 414 LFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFE 480 (514)
Q Consensus 414 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~ 480 (514)
.++.|++.+..+|...+...+..|+ ..+++.++. ..+.+|+++.|.+.|.+.|..|...++++..
T Consensus 237 ~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 237 VLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPV 301 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHH
Confidence 6678899999999999999898874 456677764 5677999999999999999988776665333
No 113
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.85 E-value=5.3e-19 Score=161.92 Aligned_cols=350 Identities=15% Similarity=0.092 Sum_probs=240.8
Q ss_pred chhHHHHHHHHHHHHHhhhhHHhhhhhhCChHH-HHHHHHHHHHHHHHHhhhhh---HHHHHHHHHHHhhhccchhhHH-
Q 010268 64 NQESLITSVVFAGMLVGAYSWGIVSDNFGRRKG-FLITAIVTSAAGLLSAFAPN---YYLLLFFRCLVGLGLGGGPVLA- 138 (514)
Q Consensus 64 ~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~-l~~~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~~~g~~~~~~- 138 (514)
+..|...++..+..++.+|+.|.++|+.|+||. +-....+..++..++.++++ ++..++...+..++.....+.+
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 446888899999999999999999999997655 55566666677777777755 4445556677777777775554
Q ss_pred HHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHH--HH-h---------------cccchHHHHHHhHHHHHHHHHH-H
Q 010268 139 SWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAW--LV-M---------------PRLGWRWLLGLSAFPSSLLLLL-Y 199 (514)
Q Consensus 139 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~--~l-~---------------~~~gw~~~f~~~~~~~~i~~~~-~ 199 (514)
+++.+..++++-++..++-.....+|+.+.-++.. .+ . +...-|..+.+.++-.++..+. +
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~ 217 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMI 217 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHH
Confidence 99999999999999988877777777766544431 11 1 2234678888887777766555 4
Q ss_pred HHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhh
Q 010268 200 SVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEM 279 (514)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (514)
+..++.++-. ....+..++..+++.
T Consensus 218 ~~v~~~~~~~--~~~~~~l~~g~k~L~----------------------------------------------------- 242 (438)
T COG2270 218 LNVHDAEKIS--SPPPTALRNGFKELK----------------------------------------------------- 242 (438)
T ss_pred hccccccccc--ccchHHHHHHHHHHH-----------------------------------------------------
Confidence 4455543210 011112222222221
Q ss_pred ccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccc
Q 010268 280 KSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGD 359 (514)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (514)
..++++++++....+++..+.+. -...+...+...+... +.+.+..+....
T Consensus 243 -----------------~t~k~i~~~~~i~~FLiA~~~~~---DGv~til~~~~~fg~~---------~~gls~~~lll~ 293 (438)
T COG2270 243 -----------------STFKEIRGRKNLVLFLIARFFYI---DGVNTILAMGGVFGAA---------DLGLSSTELLLI 293 (438)
T ss_pred -----------------HHHHHHhcccchHHHHHHHHHHH---hhHHHHHHHHHHHHHH---------HcCccHHHHHHH
Confidence 14555555544444444333322 1112222222233321 112777777778
Q ss_pred hhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcc
Q 010268 360 VFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTS 439 (514)
Q Consensus 360 ~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 439 (514)
.....+.+++|+++.|++.||+|.|+++..+.++..+..+...+.......+++.++.|.+.++.++..-++..+.+|++
T Consensus 294 g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~ 373 (438)
T COG2270 294 GIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKG 373 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCc
Confidence 88889999999999999999999999999988888877777766666667777888899999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcccccc
Q 010268 440 VRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFPFET 497 (514)
Q Consensus 440 ~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (514)
+.++.+|+++..+...+.+||++.+.+.+.+|....-....++.++..+..+...|..
T Consensus 374 k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 374 KEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred cccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 9999999999999999999999999999988865444444444444444444444443
No 114
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.83 E-value=3.5e-18 Score=161.86 Aligned_cols=337 Identities=15% Similarity=0.094 Sum_probs=235.3
Q ss_pred HHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhh----hCC-hHHHHHHHHHHHHHHHHHhhhhh------H
Q 010268 49 SFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDN----FGR-RKGFLITAIVTSAAGLLSAFAPN------Y 117 (514)
Q Consensus 49 ~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr----~G~-r~~l~~~~~~~~~~~~~~~~~~~------~ 117 (514)
..++-.+.+.+|+++..+|.+..+.-+--++..|+.|.++|| +|| |+.++.+.+..++...++..+++ .
T Consensus 33 ~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~ 112 (467)
T COG2211 33 LYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKL 112 (467)
T ss_pred HHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcch
Confidence 344456778899999999999999999999999999999995 787 55677888888888888877763 4
Q ss_pred HHHHHHHHHHhhhccchhhH-HHHHHhhc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc-------ccchHHHHHHh
Q 010268 118 YLLLFFRCLVGLGLGGGPVL-ASWFLEFI-PAPNRGFWMVIFQTFWTVGTILEAGIAWLVMP-------RLGWRWLLGLS 188 (514)
Q Consensus 118 ~~l~~~r~l~G~~~g~~~~~-~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~-------~~gw~~~f~~~ 188 (514)
...++...+.+++.....+. .++..++. .++||.+..++-+.+.++|.++...+...+.. ..||+....+.
T Consensus 113 ~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~ 192 (467)
T COG2211 113 IYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVL 192 (467)
T ss_pred HHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHH
Confidence 45666778888988888444 47777877 56889999999999999998777666555443 34788888888
Q ss_pred HHHHHHHHHHH-HHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccc
Q 010268 189 AFPSSLLLLLY-SVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMA 267 (514)
Q Consensus 189 ~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (514)
++++++..+.. +..+|.+... +..+++.
T Consensus 193 ~vi~~i~~l~~~~~v~ER~~~~--~~~~~~~------------------------------------------------- 221 (467)
T COG2211 193 GVIGVILLLFCFFNVKERVVET--QPTKTGV------------------------------------------------- 221 (467)
T ss_pred HHHHHHHHHHHHHHhhcccCcc--ccCcccc-------------------------------------------------
Confidence 88777775554 3344433200 0000000
Q ss_pred cCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccc
Q 010268 268 RDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNEL 347 (514)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (514)
.+.....+..+++++.++..++..++.++.... ......+|.+..
T Consensus 222 ------------------------~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i---~~s~~~yy~~y~-------- 266 (467)
T COG2211 222 ------------------------KLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNI---RGSIMVYYVTYV-------- 266 (467)
T ss_pred ------------------------cccHHHHHHHHHccchHHHHHHHHHHHHHHHHH---HhhhhheeEEEE--------
Confidence 000001344555654444444433333322222 222222222111
Q ss_pred cCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhccc--CcchhHHHHHHHHhhhcccc
Q 010268 348 QSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQ--PKGLTTGLLFGARICITVTF 425 (514)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~ 425 (514)
.+.+.............+.+++.++..++.+|+|+|++..++.++.+++.+++.+.+ +.+..++..++.+++.+...
T Consensus 267 -lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~ 345 (467)
T COG2211 267 -LGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIAN 345 (467)
T ss_pred -cCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccc
Confidence 113333335566666677777789999999999999999999999999888877655 34455556678888999999
Q ss_pred cceeeccccccC-------cchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCc
Q 010268 426 TVVYVYAPEIYP-------TSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQ 472 (514)
Q Consensus 426 ~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~ 472 (514)
+..+++++|..+ .+..|..+|....+.-+|.+++..+.|++.+..|+
T Consensus 346 ~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 346 PLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred cccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999998874 45568899999999999999999999999988774
No 115
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.80 E-value=1.1e-17 Score=157.00 Aligned_cols=415 Identities=13% Similarity=0.026 Sum_probs=249.4
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHhhhhcC----CCcchhHHHHHHHHHHHHHhhhhHHhhhhhh-CChHHHHHHHHHHHH
Q 010268 33 YAGMGWISEAMEMMLL-SFVGPAVQSLWH----LSPNQESLITSVVFAGMLVGAYSWGIVSDNF-GRRKGFLITAIVTSA 106 (514)
Q Consensus 33 ~~~l~~~~~~~~~~~~-~~~~~~~~~~~~----~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~-G~r~~l~~~~~~~~~ 106 (514)
.++...+...+..+-+ .++.-++..+++ +|.++..-+.++|..-.-+..+++|+++||+ |+|+++.+|.++..+
T Consensus 25 ~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~i 104 (498)
T COG3104 25 LIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAI 104 (498)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Confidence 3444444444443333 334445555555 9999999999999888889999999999995 999999999999999
Q ss_pred HHHHHhhhh--hHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCC--chhHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 010268 107 AGLLSAFAP--NYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAP--NRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGW 181 (514)
Q Consensus 107 ~~~~~~~~~--~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw 181 (514)
|.++++..+ +...++++..+.++|.|.. +...+++.|.+|++ +|...++++..+.++|+.++|.+.+++.+++||
T Consensus 105 Gh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~ 184 (498)
T COG3104 105 GHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGW 184 (498)
T ss_pred HHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCH
Confidence 999999884 7888999999999999999 88889999999765 377889999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHccCChhhhh----ccC-CchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCC
Q 010268 182 RWLLGLSAFPSSLLLLLYSVTPESPRYLC----LKG-RTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSS 256 (514)
Q Consensus 182 ~~~f~~~~~~~~i~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (514)
+..|...++-..+.++.+...++.-.... ... +..........+....-. .........+.
T Consensus 185 ~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~~~----- 250 (498)
T COG3104 185 HVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILA---------ALLTLLLNQNT----- 250 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHH---------HHHHHHHHHHH-----
Confidence 99999999888887777655542211000 000 001100000000000000 00000000000
Q ss_pred CCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhC--h--hHHHHHHHHHHH-------HHHHHHHH
Q 010268 257 NEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLS--P--ELIKSTLLLWLV-------FFGNAFSY 325 (514)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~--~~~~~~~~~~~~-------~~~~~~~~ 325 (514)
-............. ..+.+.++ + ..+++.+..+.. +.++.-..
T Consensus 251 ----------~~~~~~~~~i~~~~----------------~~~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ 304 (498)
T COG3104 251 ----------FSGVLLVISILIAI----------------IYFAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMG 304 (498)
T ss_pred ----------HHHHHHHHHHHHHH----------------HHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 00000000000000 00000000 0 011222222211 11211112
Q ss_pred HHHHHHHHHhhcCccccccccccCCCcccC-cccchhhhhhchhhHHHHHHHHHHHHhhH-------HHHHHHHHHHHHH
Q 010268 326 YGLVLLTTELNNGQNKCVSNELQSGKSRDI-NYGDVFITSFAEFPGLLLAAAMVDRLGRK-------LSMSSMFFCCCIF 397 (514)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~g~l~dr~g~~-------~~~~~~~~~~~~~ 397 (514)
..+..+.....++. .+.-+. ..+.-++..+.-++.+++..++..|++++ .-...+..+++.+
T Consensus 305 ssl~~~a~~~v~~~----------~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~ 374 (498)
T COG3104 305 SSLNLYADRNVNRQ----------IFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLG 374 (498)
T ss_pred chHHHHHHHhhccc----------ccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHH
Confidence 22222222222111 011111 14455566666667777777777775443 1234455555554
Q ss_pred hhhhhc-----c-----cCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHH--
Q 010268 398 LVPLLF-----Q-----QPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVA-- 465 (514)
Q Consensus 398 ~~~~~~-----~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~-- 465 (514)
++.+.. . .+.++.+...++..++.-+..|+..+++..+.|+...+..+++.......+..++..+.+.
T Consensus 375 fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~ 454 (498)
T COG3104 375 FLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTA 454 (498)
T ss_pred HHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceeccccc
Confidence 444331 1 2346677778888999999999999999999999999999998888877887777777662
Q ss_pred ----HHhhcCchhHHHHHHHHHHHHHHHhhcccccc
Q 010268 466 ----LVHGCHQTAALILFELVILLSGISVLLFPFET 497 (514)
Q Consensus 466 ----l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (514)
..+.......|..++.+..+..+......|+.
T Consensus 455 ~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~~~ 490 (498)
T COG3104 455 VTDPAYTAFIEGRVFGTIGVVAIVIGILLLLLSPKL 490 (498)
T ss_pred ccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhhHHH
Confidence 23344455567777777776666655554433
No 116
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.78 E-value=6.3e-18 Score=160.43 Aligned_cols=387 Identities=17% Similarity=0.124 Sum_probs=239.5
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--cCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCC-hHHHH
Q 010268 22 GFGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSL--WHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGR-RKGFL 98 (514)
Q Consensus 22 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~-r~~l~ 98 (514)
..++.+|+.+.+..+..++.......+.+-.-.+.++ .+.+.+..|++.++..++.+++++..|....|.+. |+.++
T Consensus 27 ~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli 106 (488)
T KOG2325|consen 27 DERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLI 106 (488)
T ss_pred cccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHH
Confidence 3456788888888777788877766665555445555 78888999999999999999999999999999987 88899
Q ss_pred HHHHHHHHHHHHH-hhh---h-hHHHHHHHHHHHhhhccchhhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 010268 99 ITAIVTSAAGLLS-AFA---P-NYYLLLFFRCLVGLGLGGGPVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAW 173 (514)
Q Consensus 99 ~~~~~~~~~~~~~-~~~---~-~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~ 173 (514)
.+.++.++|.++. ++. + ..+.++++|++.|+|.|.....-+|+++....++|.++++....+..+|.++||.+..
T Consensus 107 ~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~ 186 (488)
T KOG2325|consen 107 VSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQL 186 (488)
T ss_pred HHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHH
Confidence 9999999999887 332 3 5788999999999999998888899999988999999999999988999999988877
Q ss_pred HHhcc--cc-----------hHHHHHHhHHHHHHHHHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCC
Q 010268 174 LVMPR--LG-----------WRWLLGLSAFPSSLLLLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLV 239 (514)
Q Consensus 174 ~l~~~--~g-----------w~~~f~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (514)
.+..- -| +..+-++++++.++.++. .+++.|.++....++..++
T Consensus 187 ~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~---------------------- 244 (488)
T KOG2325|consen 187 AFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSV---------------------- 244 (488)
T ss_pred HHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccc----------------------
Confidence 65431 11 234567777777776555 5556665431100000000
Q ss_pred CchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHH
Q 010268 240 SDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFF 319 (514)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 319 (514)
++++.+.++.+. .+.-+...+..+...+
T Consensus 245 ---------------------------~~~~~~~~~~~~-------------------------~~~d~~~~~vc~~~~~ 272 (488)
T KOG2325|consen 245 ---------------------------EEEKSDIEKVKK-------------------------PKLDWVAVLVCIFLRF 272 (488)
T ss_pred ---------------------------hhhccchhhhcc-------------------------CChhHHHHHHHHHHHH
Confidence 000000000000 0112233444444445
Q ss_pred HHHHHHHHHHHHHHHhhcCccccccccccCCCcccCc----ccchhhhhhchhhHHHHHHHHH-HHHhhHHHHHHHHHHH
Q 010268 320 GNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDIN----YGDVFITSFAEFPGLLLAAAMV-DRLGRKLSMSSMFFCC 394 (514)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~g~l~-dr~g~~~~~~~~~~~~ 394 (514)
...+.+.......+.+..... +...+.+ +...++.++..+.-.+...... .++.+|..+..+++..
T Consensus 273 ~~~~~~~~iet~~~~~~m~~y---------~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g~l~~ 343 (488)
T KOG2325|consen 273 VVNFIATTIETLSSALTMVMY---------GWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLGFLIF 343 (488)
T ss_pred HHHHHHHHHHhccchHHHHHh---------ccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeehHHHH
Confidence 544544443332222221110 1222222 3344444444443333333332 2333444444443333
Q ss_pred HHHhhhhh----cccC---------------------------cch-hHHHHHHHHhhhcccccceeeccccccCcchhh
Q 010268 395 CIFLVPLL----FQQP---------------------------KGL-TTGLLFGARICITVTFTVVYVYAPEIYPTSVRT 442 (514)
Q Consensus 395 ~~~~~~~~----~~~~---------------------------~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~ 442 (514)
..+..... +... .+. .....++.|.+.........++.+|...++.++
T Consensus 344 f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~ 423 (488)
T KOG2325|consen 344 FLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQG 423 (488)
T ss_pred HHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCcccc
Confidence 33222211 1100 000 111233344444444455677888999999999
Q ss_pred HHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhh
Q 010268 443 TGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVL 491 (514)
Q Consensus 443 ~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 491 (514)
+..|+.......+..++|.....+....|......+.+...++...+..
T Consensus 424 ~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~ 472 (488)
T KOG2325|consen 424 TMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALWI 472 (488)
T ss_pred ceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988887666655555544444433
No 117
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.72 E-value=8.3e-16 Score=153.90 Aligned_cols=184 Identities=16% Similarity=0.081 Sum_probs=136.7
Q ss_pred HHHHHHHHHHHHhh-hhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHH---HhhhhhHH
Q 010268 43 MEMMLLSFVGPAVQ-SLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLL---SAFAPNYY 118 (514)
Q Consensus 43 ~~~~~~~~~~~~~~-~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~---~~~~~~~~ 118 (514)
..........|.+. +++|.+..+.++..+...++..++.++.|+++||+|||+.+..+.++..++... ...+++..
T Consensus 264 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (490)
T PRK10642 264 VTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIG 343 (490)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 33444445566655 567999888888888889999999999999999999999988877654433222 22334567
Q ss_pred HHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhccc-chHHHHHHhHHHHHHHH
Q 010268 119 LLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRL-GWRWLLGLSAFPSSLLL 196 (514)
Q Consensus 119 ~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~-gw~~~f~~~~~~~~i~~ 196 (514)
.+++++++.|++.+.. .....++.|.+|++.|++++++......++..++|.+.+++.+.. +|+..+++..+.+++.+
T Consensus 344 ~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~ 423 (490)
T PRK10642 344 LIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGL 423 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 7788899888877665 555577889999999999999755555666778898888887654 47877777777777777
Q ss_pred HHHHHccCChhhhhcc-----CCchHHHHHHHHHH
Q 010268 197 LLYSVTPESPRYLCLK-----GRTAEARHVLEKIA 226 (514)
Q Consensus 197 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 226 (514)
+..+++||+|++..++ ++.+++++.+++++
T Consensus 424 ~~~~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~ 458 (490)
T PRK10642 424 ITGVTMKETANRPLKGATPAASDIQEAKEILVEHY 458 (490)
T ss_pred HHHHHhccccCCCCCCccccccchhhHHHHhhccc
Confidence 7777889999887654 66677777666553
No 118
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.72 E-value=1.6e-14 Score=133.27 Aligned_cols=329 Identities=13% Similarity=0.050 Sum_probs=220.7
Q ss_pred HhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhC-----ChHH-HHHHHHHHHHHHHHHhhh-----h-------
Q 010268 54 AVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFG-----RRKG-FLITAIVTSAAGLLSAFA-----P------- 115 (514)
Q Consensus 54 ~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G-----~r~~-l~~~~~~~~~~~~~~~~~-----~------- 115 (514)
.+..|++++....+.+.+...+.. ...+.+|+.+|+.+ ||.. +..|.++...+..+..++ .
T Consensus 5 VMIvEL~vpA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~ 83 (403)
T PF03209_consen 5 VMIVELGVPAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSG 83 (403)
T ss_pred hHHHHhccHHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 356789999999999999887764 46899999999988 6655 555677766666655443 2
Q ss_pred h--HH--HHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHH
Q 010268 116 N--YY--LLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAF 190 (514)
Q Consensus 116 ~--~~--~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~ 190 (514)
+ .+ ...+.-.+.|+|.+.. .+..++++|..++++|+++.++.....-+|.+++..+.+.+.+.++-.-..-+...
T Consensus 84 ~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~ 163 (403)
T PF03209_consen 84 PFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQG 163 (403)
T ss_pred ccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHH
Confidence 1 22 2334456778888877 55558999999999999999999999999999999999998887764433333222
Q ss_pred HHHH---HHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccc
Q 010268 191 PSSL---LLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMA 267 (514)
Q Consensus 191 ~~~i---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (514)
..++ ..++..+-.|.+.....+..+
T Consensus 164 ~a~i~~~l~~ia~wg~E~r~~~~~~~~~---------------------------------------------------- 191 (403)
T PF03209_consen 164 VALIALLLNLIALWGQEPRRSRRAAAAE---------------------------------------------------- 191 (403)
T ss_pred HHHHHHHHHHHHHHhcccCCcccccCCC----------------------------------------------------
Confidence 2222 222222323321100000000
Q ss_pred cCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccc
Q 010268 268 RDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNEL 347 (514)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (514)
++++.....++++...+.-+++..... ...+.++.-...+..|.-+.
T Consensus 192 ----------------------~~~~~f~~a~~~~~~~~~a~~f~~fl~---l~t~a~~~QD~iLEPygg~V-------- 238 (403)
T PF03209_consen 192 ----------------------RPRPPFREAWRQVWASPQARRFFVFLF---LGTLAFFMQDVILEPYGGEV-------- 238 (403)
T ss_pred ----------------------CCCccHHHHHHHHHhCCChhHHHHHHH---HHHHHHHhhHHHcCCchhHH--------
Confidence 000001114444444433333333222 22223333333333332221
Q ss_pred cCCCcccCcccchhhhhhchhhHHHHHHHHHH-HHhhHHHHHHHHHHHHHHhhhhh---cccCcchhHHHHHHHHhhhcc
Q 010268 348 QSGKSRDINYGDVFITSFAEFPGLLLAAAMVD-RLGRKLSMSSMFFCCCIFLVPLL---FQQPKGLTTGLLFGARICITV 423 (514)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~d-r~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~ 423 (514)
.+++..+...+......+.++|..+.+++.. |.++++....++..+++++..+. ...+.+.+....++.|++.+.
T Consensus 239 -fgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~ 317 (403)
T PF03209_consen 239 -FGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGL 317 (403)
T ss_pred -cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhH
Confidence 2377777777788888899999999888876 56777777777777777665544 455678888889999999999
Q ss_pred cccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhh
Q 010268 424 TFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHG 469 (514)
Q Consensus 424 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~ 469 (514)
......+.+.+..+++..|..+|.....+.+...++..++|.+.|.
T Consensus 318 f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~ 363 (403)
T PF03209_consen 318 FTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDL 363 (403)
T ss_pred HHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888999999989999999999999999999999999999884
No 119
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.69 E-value=2.3e-15 Score=145.44 Aligned_cols=361 Identities=17% Similarity=0.136 Sum_probs=239.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcc-hhHHHHHH----HHHHHHHhhhhHHhhhhhhCChHHHHHHHH
Q 010268 28 LCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPN-QESLITSV----VFAGMLVGAYSWGIVSDNFGRRKGFLITAI 102 (514)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~g~i~s~----~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~ 102 (514)
+.+....++-.+...+.........+...+.++.+.. ..+..... ..+...+.++..|.++||+|||..+.+...
T Consensus 21 ~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~ 100 (463)
T KOG2816|consen 21 RHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLF 100 (463)
T ss_pred hHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHH
Confidence 3444455555555555554445555555555543322 22333333 367889999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHhhhccch---hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 010268 103 VTSAAGLLSAFAPNYYLLLFFRCLVGLGLGGG---PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRL 179 (514)
Q Consensus 103 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~---~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~ 179 (514)
...+..+...+.. |++++ +.|+..+.. ....++++|....++|....|+.......+..++|.+++.+....
T Consensus 101 ~~~l~~~~~~~~~--~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~ 175 (463)
T KOG2816|consen 101 GTILPALCLLFQG--YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFL 175 (463)
T ss_pred HHHHhHHHHHHHH--HHHhh---hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc
Confidence 9988888887776 33333 555544432 555689999999999999999999999999999999999999999
Q ss_pred chHHHHHHhHHHHHHHHHH-HHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCC
Q 010268 180 GWRWLLGLSAFPSSLLLLL-YSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNE 258 (514)
Q Consensus 180 gw~~~f~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (514)
|.-.+|++..+..++..+. ++++||+-...... + . ...
T Consensus 176 ~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~---~---~---~~~-------------------------------- 214 (463)
T KOG2816|consen 176 GIALVFLIAAASGILSLLYMLLFLPESLQEKERS---D---A---TLR-------------------------------- 214 (463)
T ss_pred CchHHHHHHHHHHHHHHHHHhhccccccCccccc---c---c---ccc--------------------------------
Confidence 9999999999988888655 66778764211000 0 0 000
Q ss_pred CCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhc
Q 010268 259 DDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVL-LTTELNN 337 (514)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 337 (514)
+.+.+........ ..++...+.+..|..+.+++..+........-.. ..+.+.+
T Consensus 215 ------~~~~~~~~~~~~~-------------------~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~ 269 (463)
T KOG2816|consen 215 ------ELTPGSLDSSHVA-------------------DAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLK 269 (463)
T ss_pred ------ccCCCcccchhhh-------------------hhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEe
Confidence 0000000000000 0111111111123333333332222222111000 1122221
Q ss_pred CccccccccccCCCcccCcccchhhhhhchhhHHHHHH-HHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHH
Q 010268 338 GQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAA-AMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFG 416 (514)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g-~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (514)
. ..+++....+.+.+..+....++.++.. .+...++.++.+..+.....+....+.+..+.|..+....+
T Consensus 270 ~---------~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~ 340 (463)
T KOG2816|consen 270 A---------KFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVV 340 (463)
T ss_pred e---------ecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHH
Confidence 1 2346676777777777888888887766 77888899999999999999999999998888876665555
Q ss_pred HHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhh
Q 010268 417 ARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHG 469 (514)
Q Consensus 417 ~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~ 469 (514)
. .......|...++.+...+++.+|+++++...+..+...++|.+.+.+...
T Consensus 341 ~-~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 341 V-ALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFAL 392 (463)
T ss_pred H-HhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHH
Confidence 4 445566788899999999999999999999999999999999999998654
No 120
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.66 E-value=8.7e-18 Score=166.48 Aligned_cols=378 Identities=17% Similarity=0.131 Sum_probs=2.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHh
Q 010268 33 YAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSA 112 (514)
Q Consensus 33 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~ 112 (514)
..++..+.+.+........+..+.+.|+++.++.|++.+.+-++..+..++..++.+|..|-|.+-+|.+++++|.++++
T Consensus 7 ~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~ 86 (539)
T PF03137_consen 7 FLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFA 86 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHh
Confidence 33444455566667777788899999999999999999999999999999999999998888889999999999988775
Q ss_pred hhh--------------------------------------------------hHHHHHHHHHHHhhhccch-hhHHHHH
Q 010268 113 FAP--------------------------------------------------NYYLLLFFRCLVGLGLGGG-PVLASWF 141 (514)
Q Consensus 113 ~~~--------------------------------------------------~~~~l~~~r~l~G~~~g~~-~~~~~~i 141 (514)
+-+ -+..++++.++.|+|.... +...+|+
T Consensus 87 lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYi 166 (539)
T PF03137_consen 87 LPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYI 166 (539)
T ss_dssp -----------------------------------------------------------------SSS------------
T ss_pred ccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeee
Confidence 310 0244778899999999987 7778999
Q ss_pred HhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhccc----------------------chHHHHHHhHHHHHHHHHHH
Q 010268 142 LEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRL----------------------GWRWLLGLSAFPSSLLLLLY 199 (514)
Q Consensus 142 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~----------------------gw~~~f~~~~~~~~i~~~~~ 199 (514)
=|.+++++-+..+|+..+...+|.++|-++++.+...+ .|..-|++.+.+.++..+.+
T Consensus 167 DDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl 246 (539)
T PF03137_consen 167 DDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPL 246 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988765311 27777777888888777777
Q ss_pred HHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhh
Q 010268 200 SVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEM 279 (514)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (514)
+++|++-+... +..++.+...++. ++. .+++.
T Consensus 247 ~~FPk~lp~~~--~~~~~~~~~~~~~-------------------------------------------~~~---~~~~~ 278 (539)
T PF03137_consen 247 FFFPKKLPGTS--ERQEEKESSERKE-------------------------------------------EDS---DKDSF 278 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HcCCccCCCcc--cccchhhhhhcch-------------------------------------------hhh---hhhcc
Confidence 77876532110 0000000000000 000 00000
Q ss_pred ccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccc
Q 010268 280 KSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGD 359 (514)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (514)
+++++++...+..+.-++.++.++++ +.+....+..........++..+.|.|.+.+ .+.++..+.++
T Consensus 279 ~~~~~~~~~~~~~~df~~~l~~Ll~N---p~f~~~~la~~~~~~~~~G~~tF~pKylE~Q---------F~~sas~A~~l 346 (539)
T PF03137_consen 279 KDPKSKKSFGKSIKDFPKALKRLLTN---PVFMCLILAGVFESFIVSGFATFLPKYLESQ---------FGLSASQASLL 346 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccchhhhhhhHHHHHHHHhcC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------hCCCHHHHHHH
Confidence 00000000011112223355666665 3444444555555666667777888777543 23666666554
Q ss_pred hhh-hhhchhhHHHHHHHHHHHHh--hHHHHHHHHHHHHHHhhh---hhc-----------c--c---------------
Q 010268 360 VFI-TSFAEFPGLLLAAAMVDRLG--RKLSMSSMFFCCCIFLVP---LLF-----------Q--Q--------------- 405 (514)
Q Consensus 360 ~~~-~~~~~~~g~~~~g~l~dr~g--~~~~~~~~~~~~~~~~~~---~~~-----------~--~--------------- 405 (514)
... ...+.++|.+++|++.+|++ .|..+..+.+...+..+. ..+ . .
T Consensus 347 ~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~ 426 (539)
T PF03137_consen 347 TGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCS 426 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCC
Confidence 433 34477889999999999985 344433333333322221 100 0 0
Q ss_pred -----------------------CcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHH-HhHhHHHH
Q 010268 406 -----------------------PKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGR-IGGMVCPL 461 (514)
Q Consensus 406 -----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~~~p~ 461 (514)
......+..++..+..+..........-+.+|+++|+.+.|+...+.. +|.+-+|+
T Consensus 427 Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPI 506 (539)
T PF03137_consen 427 CNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPI 506 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHH
Confidence 001111222222233333344555666788999999999999998877 78888999
Q ss_pred HHHHHHhhc
Q 010268 462 VAVALVHGC 470 (514)
Q Consensus 462 i~g~l~~~~ 470 (514)
++|.+.|..
T Consensus 507 ifG~iiD~t 515 (539)
T PF03137_consen 507 IFGAIIDST 515 (539)
T ss_dssp ---------
T ss_pred HHhHHHhhh
Confidence 999999863
No 121
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.63 E-value=4.8e-14 Score=139.74 Aligned_cols=374 Identities=14% Similarity=0.139 Sum_probs=255.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHH
Q 010268 30 VLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGL 109 (514)
Q Consensus 30 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~ 109 (514)
.+.++.+..+.+.+....+...+..+.+.|+++.++.|++.+.+-++..+...+..+..-|.-|-+++-+|.++++++.+
T Consensus 98 fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsl 177 (735)
T KOG3626|consen 98 FLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSL 177 (735)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHH
Confidence 44556667778887777778888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhh-------------------------------------------------h--HH-HHHHHHHHHhhhccch-hh
Q 010268 110 LSAFAP-------------------------------------------------N--YY-LLLFFRCLVGLGLGGG-PV 136 (514)
Q Consensus 110 ~~~~~~-------------------------------------------------~--~~-~l~~~r~l~G~~~g~~-~~ 136 (514)
++++-+ + ++ .++++.++.|+|.... +.
T Consensus 178 l~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tl 257 (735)
T KOG3626|consen 178 LFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTL 257 (735)
T ss_pred HHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccC
Confidence 886520 0 22 4667889999999888 77
Q ss_pred HHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhccc-------------------chHHHHHHhHHHHHHHHH
Q 010268 137 LASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRL-------------------GWRWLLGLSAFPSSLLLL 197 (514)
Q Consensus 137 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~-------------------gw~~~f~~~~~~~~i~~~ 197 (514)
..+|+=|...+++-+..+|+......+|.++|-++++++...+ -|..-|++.+.+.++..+
T Consensus 258 GisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~ 337 (735)
T KOG3626|consen 258 GISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAV 337 (735)
T ss_pred CCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999875421 277888899999999999
Q ss_pred HHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhh
Q 010268 198 LYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAK 277 (514)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (514)
.++++|++.+.. ++..+. ++.+..+. +++ +.+.+.
T Consensus 338 p~f~fPk~lp~~---~~~~~~----~~~~~~k~---------------------------~~~----~~~~~~------- 372 (735)
T KOG3626|consen 338 PLFFFPKELPKS---QKRKRA----RDLHVLKT---------------------------ESG----GAKSDK------- 372 (735)
T ss_pred HHHhCcccCccc---cccchh----hhhccccc---------------------------ccc----cccCCc-------
Confidence 999998764311 110000 00000000 000 000000
Q ss_pred hhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcc
Q 010268 278 EMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINY 357 (514)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (514)
...+.-+.-...++.++++ +.+....+...+....+.+...|+|-|+.++ .+.++..+.
T Consensus 373 ---------~~~~~ikdfp~s~~~ll~N---~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Q---------fg~sas~An 431 (735)
T KOG3626|consen 373 ---------TFGKKIKDFPKSIKRLLSN---PIFMLVVLASVIESLAITGYITFLPKYLETQ---------FGISASLAN 431 (735)
T ss_pred ---------chhhhHHHHHHHHHHHhcC---chHHHHHHHHHHHHHHHhhHHHhhHHHHHHH---------cCCCHHHHH
Confidence 0000001122356666666 4455556666677777778888899888543 346666665
Q ss_pred cch-hhhhhchhhHHHHHHHHHHHHh--hHHHHHHHHHHHHHHhhh---hhc----------------------c-c---
Q 010268 358 GDV-FITSFAEFPGLLLAAAMVDRLG--RKLSMSSMFFCCCIFLVP---LLF----------------------Q-Q--- 405 (514)
Q Consensus 358 ~~~-~~~~~~~~~g~~~~g~l~dr~g--~~~~~~~~~~~~~~~~~~---~~~----------------------~-~--- 405 (514)
.+. .+...+..+|.+++|++++|+. .|......++...+.++. ..+ . .
T Consensus 432 ~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~ 511 (735)
T KOG3626|consen 432 ILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPF 511 (735)
T ss_pred HHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCch
Confidence 544 4444566788899999999974 343333333333222221 110 0 0
Q ss_pred ---------------------------------------C------------c---------------------chhHHH
Q 010268 406 ---------------------------------------P------------K---------------------GLTTGL 413 (514)
Q Consensus 406 ---------------------------------------~------------~---------------------~~~~~~ 413 (514)
+ . ...+++
T Consensus 512 s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~ 591 (735)
T KOG3626|consen 512 SSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLA 591 (735)
T ss_pred hhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCceeeccccccccccCCCceeecCCCCCCcchhhHHHHH
Confidence 0 0 011122
Q ss_pred HH-HHHhhhcccccceeeccccccCcchhhHHHHHHHHHHH-HhHhHHHHHHHHHHhh
Q 010268 414 LF-GARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGR-IGGMVCPLVAVALVHG 469 (514)
Q Consensus 414 ~~-~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~~~p~i~g~l~~~ 469 (514)
.+ +..+..+...+..+.++.+.+|++.|+.++|+..++.+ +|.+-+|+++|+++|.
T Consensus 592 ~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 592 LFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred HHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHhh
Confidence 22 22223333445667777899999999999999998887 7888899999999984
No 122
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.63 E-value=1.8e-14 Score=140.99 Aligned_cols=157 Identities=15% Similarity=0.124 Sum_probs=128.9
Q ss_pred HHHHHHhhhhcCCCc--------chhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhh----h
Q 010268 49 SFVGPAVQSLWHLSP--------NQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAP----N 116 (514)
Q Consensus 49 ~~~~~~~~~~~~~s~--------~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~----~ 116 (514)
....|.+.++.|.++ .+.+.+.++..++..++.++.|+++||+|+|+++.++.++.+++..+..... +
T Consensus 228 ~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~ 307 (418)
T TIGR00889 228 NIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFG 307 (418)
T ss_pred HHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhh
Confidence 344466666666554 6679999999999999999999999999999999999999888877666532 2
Q ss_pred HHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHH-HHHHHHHHHHHHHHHHHhcc------cchHHHHHHh
Q 010268 117 YYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQ-TFWTVGTILEAGIAWLVMPR------LGWRWLLGLS 188 (514)
Q Consensus 117 ~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~~~~i~~~l~~~------~gw~~~f~~~ 188 (514)
++.+++.+++.|++.+.. +....++.|++|+++|+++.|+.+ ...++|.++||.+++.+.++ +||+..|++.
T Consensus 308 ~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~ 387 (418)
T TIGR00889 308 YALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFF 387 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHH
Confidence 456777899999998877 666688999999999999999997 67889999999999999886 4699999988
Q ss_pred HHHHHHHHHH-HHHccCC
Q 010268 189 AFPSSLLLLL-YSVTPES 205 (514)
Q Consensus 189 ~~~~~i~~~~-~~~~~~~ 205 (514)
++..++..++ .++++|+
T Consensus 388 ~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 388 AGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHHhCCc
Confidence 8887776554 5666665
No 123
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.62 E-value=1.3e-13 Score=134.51 Aligned_cols=351 Identities=15% Similarity=0.113 Sum_probs=207.2
Q ss_pred HHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhh---C--ChHHHHHHHHHHHHHHHHHhhh----hhH
Q 010268 47 LLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNF---G--RRKGFLITAIVTSAAGLLSAFA----PNY 117 (514)
Q Consensus 47 ~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~---G--~r~~l~~~~~~~~~~~~~~~~~----~~~ 117 (514)
......|.+.+++|+++++.....+...+... ..++.|.++|-+ | ||+-++++.++.+++.+.++.. .+.
T Consensus 8 ~~~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~ 86 (433)
T PF03092_consen 8 SRLAIYPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSA 86 (433)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchh
Confidence 33455688899999999999998888887755 569999999976 3 4555677777776666555543 345
Q ss_pred HHHHHHHHHHhhhccch-hhHHHHHHhhc--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHH
Q 010268 118 YLLLFFRCLVGLGLGGG-PVLASWFLEFI--PAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSL 194 (514)
Q Consensus 118 ~~l~~~r~l~G~~~g~~-~~~~~~i~~~~--~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i 194 (514)
....++.++..+|.... ..+-+++.|.. .++.||...+.......+|.+++..++|.+.+..+++..|.+.+++.++
T Consensus 87 ~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l 166 (433)
T PF03092_consen 87 AIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLL 166 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHH
Confidence 66666777788888887 45558888876 3334788888888999999999999999999999999999988877777
Q ss_pred HHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchh
Q 010268 195 LLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSIS 274 (514)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (514)
..+..+++.|+.+ +.+.++..... +++.+..
T Consensus 167 ~~~~~~~~~~e~~----~~~~~~~~~~~---------------------------------------------~~~~~~~ 197 (433)
T PF03092_consen 167 MLIVALFLLEERK----VRPADEVFSFG---------------------------------------------KEEVPCL 197 (433)
T ss_pred HHHHHHHhhhhcc----ccccchhhccc---------------------------------------------ccccchh
Confidence 6555444443211 00000000000 0000000
Q ss_pred HhhhhccCCccccccccccchhhHHHHhhCh-hHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcCccccccccccCCCc
Q 010268 275 EAKEMKSEDSTSTLANSNMGGITALLILLSP-ELIKSTLLLWLVFFGNAFSYYG-LVLLTTELNNGQNKCVSNELQSGKS 352 (514)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (514)
... .+.....++..++. ..++..+.....+........+ ..++..... ...+++
T Consensus 198 ~~~--------------~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~----------~gp~fs 253 (433)
T PF03092_consen 198 FGS--------------FREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDAL----------GGPHFS 253 (433)
T ss_pred hHH--------------HHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEeccc----------cccccC
Confidence 000 00011133333332 2222222100000000000000 000000000 001144
Q ss_pred ccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhh-c---------ccCcchhHHHHHHHHhhhc
Q 010268 353 RDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLL-F---------QQPKGLTTGLLFGARICIT 422 (514)
Q Consensus 353 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~~~g~~~~ 422 (514)
+...+....+..++.++|..+......+..-|+++....++.++..+.-. . .++.+....-.++..+...
T Consensus 254 ~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~ 333 (433)
T PF03092_consen 254 PSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGM 333 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHH
Confidence 44444455555666666666666666666677777666666554433211 1 1112322333344444444
Q ss_pred ccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcC
Q 010268 423 VTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCH 471 (514)
Q Consensus 423 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g 471 (514)
..+-+...+.+|+.|+..-|+.+++..++.++|..++..++..+.+..+
T Consensus 334 i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 334 IAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred HHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4455666788999999999999999999999999999999999988776
No 124
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.61 E-value=6.9e-15 Score=120.84 Aligned_cols=132 Identities=20% Similarity=0.301 Sum_probs=118.1
Q ss_pred HHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCC
Q 010268 70 TSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAP 148 (514)
Q Consensus 70 ~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~ 148 (514)
.+.+.++..+++++.|++.||+|||+.+..+..+..++.++..+.++++.+.+.+++.|++.+.. +...+++.|..|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 34567788999999999999999999999999999999988888899999999999999998887 67778999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHHHH
Q 010268 149 NRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLLYSV 201 (514)
Q Consensus 149 ~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 201 (514)
+|++..++.+....+|..++|.+.+.+.+..+|+..+++.++..++..+...+
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAF 136 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999899999999988877776555444
No 125
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.60 E-value=7.8e-14 Score=142.79 Aligned_cols=139 Identities=13% Similarity=0.099 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhc
Q 010268 67 SLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFI 145 (514)
Q Consensus 67 g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~ 145 (514)
.+...+..++..++.++.|+++||+|||++++++.++.+++.++.+++++...+++.+++.|++.+.. ++..++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34456677889999999999999999999999999999999999999988888888888888877666 77778999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHHHHccCCh
Q 010268 146 PAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLLYSVTPESP 206 (514)
Q Consensus 146 ~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~ 206 (514)
|.++|++++|+..+...+|.+++|.+++.+.+. +...+|++.++..++..++.+++||+.
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 999999999999999999999999999988763 466788888887777777777788863
No 126
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.59 E-value=1.1e-13 Score=134.78 Aligned_cols=156 Identities=13% Similarity=0.108 Sum_probs=127.6
Q ss_pred HHHHHHH-hhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 010268 48 LSFVGPA-VQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCL 126 (514)
Q Consensus 48 ~~~~~~~-~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 126 (514)
+....|. +.+++|.+..+.|++.+...++..++.+++|+++||+|||+.+..+.....+......+.++.+.+++.+++
T Consensus 235 ~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 314 (393)
T PRK15011 235 YIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLL 314 (393)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 3344554 456789999999999888888888899999999999999998887776666555555566778888888888
Q ss_pred Hhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHHHHccC
Q 010268 127 VGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLLYSVTPE 204 (514)
Q Consensus 127 ~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 204 (514)
.+++.+.. +....+..|..|+ +|++++++++...++|..++|.+++.+.+.+||+..|++.+++.++.++..+++||
T Consensus 315 ~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 315 NAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 88877766 4555677888875 69999999999999999999999999999899999999988888888777777664
No 127
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.59 E-value=4.9e-14 Score=138.64 Aligned_cols=150 Identities=9% Similarity=0.014 Sum_probs=127.5
Q ss_pred hhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccch-
Q 010268 56 QSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCLVGLGLGGG- 134 (514)
Q Consensus 56 ~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~- 134 (514)
..+.+.+..+.|++.++..++..++.+++|++.||+|+|+.+.++.++.+++.++.+++++.+.+++.+++.|++.+..
T Consensus 254 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~ 333 (420)
T PRK09528 254 FATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLL 333 (420)
T ss_pred HhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 3344677788999999999999999999999999999999999999999999888889999999999999999988776
Q ss_pred hhHHHHHHhhcCCCchhHHHHH-HHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHH-HHHccCC
Q 010268 135 PVLASWFLEFIPAPNRGFWMVI-FQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLL-YSVTPES 205 (514)
Q Consensus 135 ~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~-~~~~~~~ 205 (514)
+....++.+.+|++.|+...+. ++....+|.+++|.+.+++.+.+||+..|.+.++..++..++ ++.++++
T Consensus 334 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 334 VGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 5566888999999999887665 677788999999999999999999999999988877666544 4444443
No 128
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.58 E-value=6e-13 Score=121.01 Aligned_cols=178 Identities=20% Similarity=0.145 Sum_probs=121.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHH
Q 010268 23 FGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAI 102 (514)
Q Consensus 23 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~ 102 (514)
..+.|+.-+..-.++...+ ...+|..-.+.+++|.+..|++.+....+...++..++.|.++||+|||+.-++.++
T Consensus 32 f~~Fqr~yl~vY~La~~aD----WLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~ci 107 (354)
T PF05631_consen 32 FRRFQRKYLLVYLLAMAAD----WLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCI 107 (354)
T ss_pred HHHHHHHHHHHHHHHHHHH----HhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHH
Confidence 3444554444333333333 344666656668899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HHHH-HhhcCCC----chhHHHHHHH-HHHHHHHHHHHHHHHHH
Q 010268 103 VTSAAGLLSAFAPNYYLLLFFRCLVGLGLGGGPVL-ASWF-LEFIPAP----NRGFWMVIFQ-TFWTVGTILEAGIAWLV 175 (514)
Q Consensus 103 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i-~~~~~~~----~r~~~~~~~~-~~~~~G~~~~~~i~~~l 175 (514)
+.+++++. -..++++.++++|++.|++......+ -+++ .|.-..+ ..+.-++... ...++-.+.+..++.++
T Consensus 108 ly~~scl~-k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l 186 (354)
T PF05631_consen 108 LYSLSCLT-KHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVL 186 (354)
T ss_pred HHHHHHHH-HhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHH
Confidence 88888864 45688999999999999999988444 4654 4543222 2233333222 22333345555566666
Q ss_pred hcccch--HHHHHHhHHHHHHHHHHH-HHccCC
Q 010268 176 MPRLGW--RWLLGLSAFPSSLLLLLY-SVTPES 205 (514)
Q Consensus 176 ~~~~gw--~~~f~~~~~~~~i~~~~~-~~~~~~ 205 (514)
.+..+. ..+|.......++..++. ...+|+
T Consensus 187 ~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~EN 219 (354)
T PF05631_consen 187 ADWFGFGPVAPFDAAIVLLAVAAVLILKTWPEN 219 (354)
T ss_pred HHHhCCCCcchHHHHHHHHHHHHHHHHhccccc
Confidence 665544 778888777777665543 334554
No 129
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.58 E-value=7.7e-13 Score=123.78 Aligned_cols=359 Identities=14% Similarity=0.076 Sum_probs=219.4
Q ss_pred HHHHHHhhhh-cCCCcchhH-HHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 010268 49 SFVGPAVQSL-WHLSPNQES-LITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCL 126 (514)
Q Consensus 49 ~~~~~~~~~~-~~~s~~~~g-~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 126 (514)
+.+.|++.+. .|++..|+. -+.-...-.+....++...+.|..+.|++++++.+...+...++.+.++...+-+..+.
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~ 103 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFF 103 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHH
Confidence 4455666665 788888874 45566667788899999999999999999999999999999999999999999999999
Q ss_pred HhhhccchhhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc--ccchHHHHHHhHHHHHHHHHHHHHccC
Q 010268 127 VGLGLGGGPVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMP--RLGWRWLLGLSAFPSSLLLLLYSVTPE 204 (514)
Q Consensus 127 ~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~--~~gw~~~f~~~~~~~~i~~~~~~~~~~ 204 (514)
.|++.+...+..+++-...++++..++.+...++.-+|..++..++..+.. ..+.+...++......++++..+++|.
T Consensus 104 yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~ 183 (412)
T PF01770_consen 104 YGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPM 183 (412)
T ss_pred HHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999988877777888888899999999999999999999999999888776 345666767776666677777888887
Q ss_pred ChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCc
Q 010268 205 SPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDS 284 (514)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (514)
.++...-+++.++... +++...++.++.+++..+ .+++.+..
T Consensus 184 ~~~S~~f~r~~~~~~~-------------------------------------~~~~~~~~~~~~~~~~~~-~~~~~~~~ 225 (412)
T PF01770_consen 184 PKRSLFFHRKPPAEQD-------------------------------------ANESESDKMNESPESSSS-TEKSPSTE 225 (412)
T ss_pred CCcccceeccCccccc-------------------------------------cccccccccccccccccc-cccCcccc
Confidence 6542211111110000 000000000000000000 00000000
Q ss_pred cccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhh
Q 010268 285 TSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITS 364 (514)
Q Consensus 285 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (514)
+...++..+.-++.++...+++.. +.-.+-+......++-+..+...+-++.. +........|..-....
T Consensus 226 ~~~~~~~l~~l~~~~~~~y~~~~l---l~WSlWWa~atcgy~qv~nYvQ~LW~~v~-------~~~~~~vYNG~VeA~~t 295 (412)
T PF01770_consen 226 SSSRKSVLRLLWKDFKSCYSNPRL---LLWSLWWAFATCGYYQVINYVQSLWDTVP-------PSDNESVYNGAVEAAST 295 (412)
T ss_pred cchHHHHHHHHHHHHHHHhcCchH---HHHHHHHHHHHhHHHHHHHHHHHHHHhcC-------CCCCCcccchHHHHHHH
Confidence 000000011112233333333222 22222223333334444444444332221 11123333466677777
Q ss_pred hchhhHHHHHHHHHHHHhhHH--HHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhh
Q 010268 365 FAEFPGLLLAAAMVDRLGRKL--SMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRT 442 (514)
Q Consensus 365 ~~~~~g~~~~g~l~dr~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~ 442 (514)
+.+.++.+..|++..+..+.. .+....++.+.+++.+....+.|...+..++.+.......+....-++.....+.-|
T Consensus 296 llgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~ya 375 (412)
T PF01770_consen 296 LLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYA 375 (412)
T ss_pred HHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccee
Confidence 888888888888855555433 333444555566666677778888777777777776666666666666666666667
Q ss_pred HHHHHHHHHHHHh
Q 010268 443 TGVGVASSIGRIG 455 (514)
Q Consensus 443 ~~~g~~~~~~~~g 455 (514)
..+|+...+..+-
T Consensus 376 LVFGiNtf~Al~L 388 (412)
T PF01770_consen 376 LVFGINTFVALVL 388 (412)
T ss_pred eeeeeHHHHHHHH
Confidence 7777766554433
No 130
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.57 E-value=6.5e-14 Score=135.90 Aligned_cols=148 Identities=20% Similarity=0.109 Sum_probs=125.7
Q ss_pred HHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhH--HHHHHHHHH
Q 010268 49 SFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNY--YLLLFFRCL 126 (514)
Q Consensus 49 ~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l 126 (514)
....+.+.+++|.+..+.+++.+...++..+++++.|++.||+|||+.+.++..+.+++.++..+.++. ..++...++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (377)
T TIGR00890 225 IGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVAL 304 (377)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHH
Confidence 334455668899999999999999999999999999999999999999999998888888877776643 334456777
Q ss_pred Hhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHH
Q 010268 127 VGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLL 196 (514)
Q Consensus 127 ~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~ 196 (514)
.|++.+.. +....++.|.+|+++|+++.|+.+....+|..++|.+.+.+.+..||+..|.+.++..++.+
T Consensus 305 ~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 305 VFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 88887776 55567889999999999999999999999999999999999999999999998887766643
No 131
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.57 E-value=2.5e-13 Score=133.19 Aligned_cols=159 Identities=20% Similarity=0.104 Sum_probs=129.9
Q ss_pred HHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 010268 46 MLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRC 125 (514)
Q Consensus 46 ~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 125 (514)
.......|.+.++.|.+..+.+.+.+...++..++.++.|++.||+|||+.+..+.....++.++..+.++.+.+.+..+
T Consensus 237 ~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (406)
T PRK11551 237 YFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGF 316 (406)
T ss_pred HHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 34444567888889999999999999999999999999999999999999998877777777777777778777777788
Q ss_pred HHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhccc-chHHHHHHhHHHHHHHHHHHHHcc
Q 010268 126 LVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRL-GWRWLLGLSAFPSSLLLLLYSVTP 203 (514)
Q Consensus 126 l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~-gw~~~f~~~~~~~~i~~~~~~~~~ 203 (514)
+.|++.+.. +...++..|.+|+++|+++.|+.+....+|..++|.+++.+.+.. +|...++......++..+..+++.
T Consensus 317 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 317 AAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLV 396 (406)
T ss_pred HHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 888877665 666688899999999999999999999999999999999998864 456666666655555555544443
Q ss_pred C
Q 010268 204 E 204 (514)
Q Consensus 204 ~ 204 (514)
+
T Consensus 397 ~ 397 (406)
T PRK11551 397 S 397 (406)
T ss_pred c
Confidence 3
No 132
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.56 E-value=3.1e-13 Score=129.75 Aligned_cols=163 Identities=29% Similarity=0.331 Sum_probs=144.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhc-CCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChH-HHHHHHHHHHHHHHHHhhhhh
Q 010268 39 ISEAMEMMLLSFVGPAVQSLW-HLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRK-GFLITAIVTSAAGLLSAFAPN 116 (514)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~-~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~-~l~~~~~~~~~~~~~~~~~~~ 116 (514)
+.............|.+.++. |.+..+.+++.+...++..++.++.|++.||+|||+ .+..+..+..++.++..+.++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 264 (352)
T cd06174 185 FLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPS 264 (352)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 334444455555666666654 999999999999999999999999999999999999 999999999999999999888
Q ss_pred HHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHH
Q 010268 117 YYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLL 195 (514)
Q Consensus 117 ~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~ 195 (514)
.+.+++..++.|++.+.. +...+++.|..|+++|++.+++.+...++|..++|.+.+.+.+..+|+..+.+.+++.++.
T Consensus 265 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~ 344 (352)
T cd06174 265 LALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLA 344 (352)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHH
Confidence 899999999999999988 7777999999999999999999999999999999999999998899999999999988887
Q ss_pred HHHHHH
Q 010268 196 LLLYSV 201 (514)
Q Consensus 196 ~~~~~~ 201 (514)
.+..++
T Consensus 345 ~i~~~~ 350 (352)
T cd06174 345 ALLLLL 350 (352)
T ss_pred HHHhee
Confidence 766543
No 133
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.55 E-value=3.9e-13 Score=130.36 Aligned_cols=154 Identities=11% Similarity=0.024 Sum_probs=133.3
Q ss_pred HHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q 010268 45 MMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFR 124 (514)
Q Consensus 45 ~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 124 (514)
...+....|.+.+++|.+..++|++.+...++..++.++.|++.||+|+|+.+.++.++..+..++.+++++.+.+++.+
T Consensus 221 ~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q 300 (382)
T TIGR00902 221 HAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQ 300 (382)
T ss_pred HHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHH
Confidence 33444455666678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHH-HHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHHH
Q 010268 125 CLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQ-TFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLLYS 200 (514)
Q Consensus 125 ~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 200 (514)
++.|+..+.. +....++.+. |+++|++..++++ ...++|.+++|.++|.+.+++|+ ..|++.+++.++.+++..
T Consensus 301 ~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~~~ 376 (382)
T TIGR00902 301 ILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFLIP 376 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHH
Confidence 9999999998 7777888887 9999999999976 56789999999999999999996 667777777666654443
No 134
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.54 E-value=6.1e-13 Score=130.11 Aligned_cols=156 Identities=17% Similarity=0.195 Sum_probs=130.6
Q ss_pred HHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 010268 48 LSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCLV 127 (514)
Q Consensus 48 ~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 127 (514)
.....|.+.++.|. .+.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++.+++.
T Consensus 235 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (399)
T PRK05122 235 IATFITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALT 312 (399)
T ss_pred HHHHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 33444555556666 3456777888889999999999999999999999999888888888888888888888889999
Q ss_pred hhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHHHHccCC
Q 010268 128 GLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLLYSVTPES 205 (514)
Q Consensus 128 G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~ 205 (514)
|++.+.. +.....+.+..|+++|+++.++++....+|..+++.+.+.+.+..||+..|++.++..++.++..++++++
T Consensus 313 G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 313 GFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9998876 66667778899999999999999999999999999999999998999999999888888877666555544
No 135
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.53 E-value=1.2e-12 Score=126.95 Aligned_cols=149 Identities=15% Similarity=0.154 Sum_probs=125.8
Q ss_pred HhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccc
Q 010268 54 AVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCLVGLGLGG 133 (514)
Q Consensus 54 ~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 133 (514)
.+.+++|.++.+.|++.+...+...++.++.|++.||+|||+.+.++.++..+...+..+.++.+.+++.+++.|++.+.
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 304 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGI 304 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34577899999999998888878888899999999999999999888777666666666777888888889999998887
Q ss_pred h-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHHHHcc
Q 010268 134 G-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLLYSVTP 203 (514)
Q Consensus 134 ~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~ 203 (514)
. +....++.|..|+ ++++++++++....+|..++|.+++.+.+..||+..|++.++..++..+...+++
T Consensus 305 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 374 (375)
T TIGR00899 305 LAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLIK 374 (375)
T ss_pred HHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHheec
Confidence 6 6666778888765 5679999999999999999999999999989999999998888887777665554
No 136
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.52 E-value=1.9e-13 Score=134.83 Aligned_cols=173 Identities=12% Similarity=0.038 Sum_probs=139.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHH
Q 010268 314 LWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFC 393 (514)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~ 393 (514)
.++.++...+..+....+.|.+.++.+ .+..+.+...+...++..++.++.|++.||+|||+++.++.++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~g----------~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~ 97 (434)
T PRK11663 28 MYLGYALFYFTRKSFNAAMPEMLADLG----------LSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIA 97 (434)
T ss_pred HHHHHHHHHHhhhhHHHhhHHHHHhcC----------CCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHH
Confidence 334444444444455666777765544 7777788888999999999999999999999999999999999
Q ss_pred HHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCch
Q 010268 394 CCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQT 473 (514)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~ 473 (514)
.+++.+.....++.+.+.+..++.|++.+..++....++.|.+|+++|++++|+.+....+|..++|.+.+.+.+..||.
T Consensus 98 ~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~ 177 (434)
T PRK11663 98 TGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWR 177 (434)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHH
Confidence 98888877777777766666677788888888888899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhccccc
Q 010268 474 AALILFELVILLSGISVLLFPFE 496 (514)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~ 496 (514)
..+.+.+++.++..++..+..+|
T Consensus 178 ~~f~~~~i~~~~~~~~~~~~~~~ 200 (434)
T PRK11663 178 YGMMIAGIIAIVVGLFLCWRLRD 200 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC
Confidence 88888777666554444444444
No 137
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.52 E-value=1.1e-13 Score=128.75 Aligned_cols=180 Identities=12% Similarity=0.025 Sum_probs=166.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHH
Q 010268 306 ELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKL 385 (514)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~ 385 (514)
+.+..++.+.+..|+.....+...-.+|.+.++.+ .+...++...+.+..+..++.++...+.||+.||+
T Consensus 10 ~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~----------vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~ 79 (394)
T COG2814 10 PMWLALLALALAAFAIGTTEFVPVGLLPPIAADLG----------VSEGAAGQLITAYALGVALGAPLLALLTGRLERRR 79 (394)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHH
Confidence 33466667777778888888888888998887766 88888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHH
Q 010268 386 SMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVA 465 (514)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~ 465 (514)
+++....+..++-++..+.++++.+.+.=++.++..+.+++...+...+++|+++|+++.++......+...+|..++.+
T Consensus 80 lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ 159 (394)
T COG2814 80 LLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTF 159 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCchhHHHHHHHHHHHHHHHhhcccc
Q 010268 466 LVHGCHQTAALILFELVILLSGISVLLFPF 495 (514)
Q Consensus 466 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 495 (514)
+-|.+||..+|+..+++.+++.+..+...|
T Consensus 160 ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 160 LGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999998888887
No 138
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.52 E-value=8e-13 Score=129.80 Aligned_cols=155 Identities=15% Similarity=0.107 Sum_probs=127.9
Q ss_pred HHHHHHHHhhhhcCCCcc----hhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHH
Q 010268 47 LLSFVGPAVQSLWHLSPN----QESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLF 122 (514)
Q Consensus 47 ~~~~~~~~~~~~~~~s~~----~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 122 (514)
...+..|.+..+.+.+.. ..+.+.++..++..++.++.|++.||+|||+.+..+..+..++.+...+.++.+.+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (408)
T PRK09874 237 SIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGI 316 (408)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 344445555555433333 2466667778888899999999999999999999998888888887777788888889
Q ss_pred HHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHHHH
Q 010268 123 FRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLLYSV 201 (514)
Q Consensus 123 ~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 201 (514)
.+++.|++.+.. +...+++.+..++++||+.++++.....+|..+||.+++.+.+..||+..|++.+++.++..+..++
T Consensus 317 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 317 LRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 999999999887 6666788888899999999999999999999999999999999999999999998888877665443
No 139
>PRK03545 putative arabinose transporter; Provisional
Probab=99.52 E-value=2e-12 Score=125.93 Aligned_cols=151 Identities=17% Similarity=0.140 Sum_probs=121.5
Q ss_pred HHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHH-HHHhhhhhHHHHHHHHHHH
Q 010268 49 SFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAG-LLSAFAPNYYLLLFFRCLV 127 (514)
Q Consensus 49 ~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~ 127 (514)
....|.+.+.+|.|..+.+++.+...++..+++++.|++.||+|||+... +..+..++. ++..+.++.+.+++..++.
T Consensus 226 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 304 (390)
T PRK03545 226 SYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFW 304 (390)
T ss_pred HHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 33445566668999999999999999999999999999999999887544 444444443 3345567778888889999
Q ss_pred hhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHHHH
Q 010268 128 GLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLLYSV 201 (514)
Q Consensus 128 G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 201 (514)
|++.+.. +...+.+.+..| ++|++++|++.....+|..+||++++.+.+++|++..|+..+++.++.++....
T Consensus 305 g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (390)
T PRK03545 305 GIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSIL 378 (390)
T ss_pred HHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHH
Confidence 9987766 555577777765 689999999999999999999999999999999999999998888877666444
No 140
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.51 E-value=1.9e-13 Score=132.90 Aligned_cols=180 Identities=9% Similarity=-0.024 Sum_probs=142.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHH
Q 010268 308 IKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSM 387 (514)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~ 387 (514)
|+.+.......++.....+......|.+.++.+ .++.+.+...+...++..+++++.|++.||+|||+.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g----------~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~ 88 (394)
T PRK10213 19 WSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLG----------ISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVV 88 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHH
Confidence 344344333333333344444445566655443 7777888888889999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHH
Q 010268 388 SSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALV 467 (514)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~ 467 (514)
..+.++.++..+.....++.+.+++.-++.|++.+...+...+++.|.+|+++|+++.++......+|..++|.+.+.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~ 168 (394)
T PRK10213 89 ILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLG 168 (394)
T ss_pred HHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888777777778888888889999999888999999999999999999999999999999999999999999
Q ss_pred hhcCchhHHHHHHHHHHHHHHHhhcccccc
Q 010268 468 HGCHQTAALILFELVILLSGISVLLFPFET 497 (514)
Q Consensus 468 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (514)
+..||...+++.+++.++..+......||+
T Consensus 169 ~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~ 198 (394)
T PRK10213 169 ELIGWRNVFNAAAVMGVLCIFWIIKSLPSL 198 (394)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 999999888887776665554444434443
No 141
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.51 E-value=1.5e-12 Score=127.99 Aligned_cols=159 Identities=17% Similarity=0.130 Sum_probs=134.2
Q ss_pred HHHHHHHhhhh-cCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 010268 48 LSFVGPAVQSL-WHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCL 126 (514)
Q Consensus 48 ~~~~~~~~~~~-~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 126 (514)
.....|.+.++ +|.++.+.|++.+...++..++.++.|++.||.++++.+..+.++.+++.++..+.++.+...++.++
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLAL 321 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 34456766666 89999999999999999999999999999999888888888888888888888888888888888899
Q ss_pred Hhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHH-HHHHHHccC
Q 010268 127 VGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLL-LLLYSVTPE 204 (514)
Q Consensus 127 ~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~-~~~~~~~~~ 204 (514)
.|++.+.. +...+++.+..|++.||+++|++.....+|..+||.+.+.+.+.+|++..+++.++..++. .+....+++
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (417)
T PRK10489 322 FGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGE 401 (417)
T ss_pred HHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhccc
Confidence 99988776 4555788899999999999999999999999999999999999999999988777665554 444555665
Q ss_pred Ch
Q 010268 205 SP 206 (514)
Q Consensus 205 ~~ 206 (514)
.+
T Consensus 402 ~~ 403 (417)
T PRK10489 402 LR 403 (417)
T ss_pred cc
Confidence 43
No 142
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.50 E-value=2.8e-13 Score=132.56 Aligned_cols=180 Identities=8% Similarity=0.018 Sum_probs=146.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHH
Q 010268 309 KSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMS 388 (514)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~ 388 (514)
+.++..++.+++............|.+.++.+ .+..+.++..+...++..++.++.|++.||+|||+.+.
T Consensus 8 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~----------~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~ 77 (412)
T TIGR02332 8 RLIIFLFILFIFSFLDRINIGFAGLTMGKDLG----------LSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIA 77 (412)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcC----------CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHH
Confidence 44455555555555555556666666555443 77778888999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHh
Q 010268 389 SMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVH 468 (514)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~ 468 (514)
.+.++..+..+...+.++.+.+.+.-++.|++.+...+....++.|.+|+++|++++|+.+....+|..++|.+.+.+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~ 157 (412)
T TIGR02332 78 GIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILA 157 (412)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999888888888878888888888899999999888888899999999999999999999999999999999998874
Q ss_pred ------hcCchhHHHHHHHHHHHHHHHhhccccccc
Q 010268 469 ------GCHQTAALILFELVILLSGISVLLFPFETT 498 (514)
Q Consensus 469 ------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (514)
..||...+.+.++..++..++.+++.||++
T Consensus 158 ~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p 193 (412)
T TIGR02332 158 LDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSP 193 (412)
T ss_pred CCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 358888888887777766666666666654
No 143
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.50 E-value=1.2e-12 Score=123.47 Aligned_cols=143 Identities=13% Similarity=0.142 Sum_probs=126.3
Q ss_pred CcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceee
Q 010268 351 KSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYV 430 (514)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 430 (514)
..+..-+....+.-.+.++.-++.+++.+|+|+.+++..++.+..+-++.+.+..|+|.....-++.|+..+..+..+.+
T Consensus 403 ~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~s 482 (618)
T KOG3762|consen 403 GIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIIS 482 (618)
T ss_pred CcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHH
Confidence 44444466777778888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCcchhhHHHHHHHHHH-HHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcc
Q 010268 431 YAPEIYPTSVRTTGVGVASSIG-RIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLF 493 (514)
Q Consensus 431 ~~~~~~p~~~~~~~~g~~~~~~-~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 493 (514)
+++...|++.+.++.|+..... .+|-.+|.+++|.+.+.+|....|.++++.+++..++...+
T Consensus 483 Y~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 483 YASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred HHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998766 49999999999999999999989998888877766655543
No 144
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.50 E-value=2.5e-13 Score=130.52 Aligned_cols=170 Identities=16% Similarity=0.082 Sum_probs=135.4
Q ss_pred HHHHHHHHHHHHHHH-HhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 010268 319 FGNAFSYYGLVLLTT-ELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIF 397 (514)
Q Consensus 319 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~ 397 (514)
+.............| .+.++.+ .+..+.++..+...++..++.++.|+++||+|||+++..+.++.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~----------~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~ 75 (352)
T PF07690_consen 6 FLSGFGFSIISPALPLYLAEELG----------LSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALG 75 (352)
T ss_dssp HHHHHHHHHHHHHHH-HHHCCST----------TTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHccC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhH
Confidence 333444444444555 4444433 77778888999999999999999999999999999999999988888
Q ss_pred hhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHH
Q 010268 398 LVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALI 477 (514)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~ 477 (514)
.+...+..+.+...+..++.|++.+...+....++.|.+|+++|++++|+.+....+|..++|.+.+.+.+..+|...++
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~ 155 (352)
T PF07690_consen 76 SLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFL 155 (352)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHH
T ss_pred HHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccc
Confidence 44444446666777888899999999999999999999999999999999999999999999999999998889988999
Q ss_pred HHHHHHHHHHHHhhccccccc
Q 010268 478 LFELVILLSGISVLLFPFETT 498 (514)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~ 498 (514)
+.+++.++..++...+.++++
T Consensus 156 ~~~~~~~~~~il~~~~~~~~~ 176 (352)
T PF07690_consen 156 ISAILSLIAAILFILFLPEPP 176 (352)
T ss_dssp HHHHHHHHHHHHHHCCC---S
T ss_pred cccchhhhhhhhHhhhhhhcc
Confidence 988888888775444444333
No 145
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.50 E-value=3.1e-12 Score=125.03 Aligned_cols=164 Identities=17% Similarity=0.150 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHH-HHHHHHHHHHHHHhh---
Q 010268 38 WISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFL-ITAIVTSAAGLLSAF--- 113 (514)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~-~~~~~~~~~~~~~~~--- 113 (514)
.++............|.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+.+.+
T Consensus 231 ~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~ 310 (402)
T TIGR00897 231 RIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQ 310 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444455566678888889999999999999999999999999999999999988764 333333333333222
Q ss_pred --hhhHHHHHHHHHHHhhhccchhhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHH
Q 010268 114 --APNYYLLLFFRCLVGLGLGGGPVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFP 191 (514)
Q Consensus 114 --~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~ 191 (514)
.++.+.+++..++.|++.+........+.+. ++++|++++|+.+....+|..++|.+++.+.+..||+..+++.++.
T Consensus 311 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~ 389 (402)
T TIGR00897 311 HFGHSFAVALIIAIALGIFLAGYVPLAAVFPTL-APKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAAL 389 (402)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Confidence 2356667778888888877663334555565 5568999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHc
Q 010268 192 SSLLLLLYSVT 202 (514)
Q Consensus 192 ~~i~~~~~~~~ 202 (514)
.++..++..++
T Consensus 390 ~~i~~~~~~~~ 400 (402)
T TIGR00897 390 YVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHh
Confidence 87776665554
No 146
>PRK12382 putative transporter; Provisional
Probab=99.49 E-value=2.3e-12 Score=125.72 Aligned_cols=152 Identities=16% Similarity=0.178 Sum_probs=128.5
Q ss_pred HHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 010268 47 LLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCL 126 (514)
Q Consensus 47 ~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 126 (514)
......|.+.++.+.+. .++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++..++
T Consensus 234 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (392)
T PRK12382 234 VIGTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAAL 311 (392)
T ss_pred HHHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 33444555556666653 5666777888889999999999999999999999999888888888888888888888999
Q ss_pred Hhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHHH
Q 010268 127 VGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLLYS 200 (514)
Q Consensus 127 ~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 200 (514)
.|++.+.. +.....+.+.+|+++||+++|+++....+|..++|.+.+.+.++.||+..|.+.++..++..+..+
T Consensus 312 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 312 TGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 99998876 666678889999999999999999999999999999999999999999999998888777765544
No 147
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.48 E-value=2.5e-13 Score=132.23 Aligned_cols=149 Identities=15% Similarity=0.121 Sum_probs=129.7
Q ss_pred CcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceee
Q 010268 351 KSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYV 430 (514)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 430 (514)
.+..+.++..+...++..++.++.|++.||+|||+.+..+.++.+++.+.....++.+...+..++.|++.+...+...+
T Consensus 37 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 116 (385)
T TIGR00710 37 TPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQA 116 (385)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHH
Confidence 77777788889999999999999999999999999999999888888887777777777777788888888888888999
Q ss_pred ccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcccccccC
Q 010268 431 YAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFPFETTG 499 (514)
Q Consensus 431 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (514)
++.|.+|+++|++++|+.+....+|..++|.+.+.+.+..+|...+++.+++.++..+...+..||+++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (385)
T TIGR00710 117 LVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLP 185 (385)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999999999999999999999999999888888877777766666655555543
No 148
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.48 E-value=1e-12 Score=130.26 Aligned_cols=158 Identities=11% Similarity=0.112 Sum_probs=125.9
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhh--CChHHHHH--HHHHHHHHHHHHhhhhh
Q 010268 41 EAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNF--GRRKGFLI--TAIVTSAAGLLSAFAPN 116 (514)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~--G~r~~l~~--~~~~~~~~~~~~~~~~~ 116 (514)
...........+|.+.+++|.+..+.+++.+...++..+++++.|+++||. ++|+...+ +.++.+++.++..+.++
T Consensus 253 ~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~ 332 (455)
T TIGR00892 253 MFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGD 332 (455)
T ss_pred HHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhch
Confidence 333333344455667778899999999999999999999999999999984 33433333 33444455556667788
Q ss_pred HHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhccc-chHHHHHHhHHHHHH
Q 010268 117 YYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRL-GWRWLLGLSAFPSSL 194 (514)
Q Consensus 117 ~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~-gw~~~f~~~~~~~~i 194 (514)
++.+++.+++.|++.+.. +...+++.|.+|++++++.+++++...++|..+||.+++.+.+.. +|+..|++.+++.++
T Consensus 333 ~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li 412 (455)
T TIGR00892 333 YTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVS 412 (455)
T ss_pred HHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHH
Confidence 898999999999998887 666788899999999999999999999999999999999998877 599999998887666
Q ss_pred HHHH
Q 010268 195 LLLL 198 (514)
Q Consensus 195 ~~~~ 198 (514)
..+.
T Consensus 413 ~~~~ 416 (455)
T TIGR00892 413 AGLF 416 (455)
T ss_pred HHHH
Confidence 5443
No 149
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.47 E-value=3.6e-12 Score=123.70 Aligned_cols=151 Identities=16% Similarity=0.134 Sum_probs=123.5
Q ss_pred HHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHh
Q 010268 49 SFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCLVG 128 (514)
Q Consensus 49 ~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 128 (514)
...+|.+.++.|.+..+.|++.+...++..+++++.|++.||+|+|+.+..+..+..++.+... + ........++.|
T Consensus 220 ~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g 296 (381)
T PRK03633 220 YGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILG 296 (381)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHH
Confidence 3446777778899999999999999999999999999999999999999888887777665443 2 233345667777
Q ss_pred hhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHHHHc
Q 010268 129 LGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLLYSVT 202 (514)
Q Consensus 129 ~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~ 202 (514)
++.+.. |...+++.|..|+++++...+.+....++|.++||.+++++.++.||++.|.+.+...++..+..++.
T Consensus 297 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 297 AAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHhc
Confidence 765555 77778888999888888888888889999999999999999999999999999888877766655544
No 150
>PRK10504 putative transporter; Provisional
Probab=99.47 E-value=7.4e-13 Score=132.49 Aligned_cols=178 Identities=10% Similarity=-0.007 Sum_probs=145.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHH
Q 010268 309 KSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMS 388 (514)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~ 388 (514)
+.++..++..++.....+....+.|.+.++.+ .+....++..+...++..++.++.|++.||+|||+++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g----------~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~ 79 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQSLG----------ESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFF 79 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhC----------cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHH
Confidence 45566666677777777777778888876554 77777777778888888999999999999999999998
Q ss_pred HHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHh
Q 010268 389 SMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVH 468 (514)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~ 468 (514)
.+..+.+++.+.....++.+.+.+..++.|++.+...+...+.+.|.+|+++|+++.|+.+....+|..++|.+.|.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~ 159 (471)
T PRK10504 80 TAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVE 159 (471)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh
Confidence 88877777776666666777777778888999888888889999999999999999999999999999999999999999
Q ss_pred hcCchhHHHHHHHHHHHHHHHhhccccc
Q 010268 469 GCHQTAALILFELVILLSGISVLLFPFE 496 (514)
Q Consensus 469 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (514)
+.||...|.+......+..+......++
T Consensus 160 ~~gw~~~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 160 YASWHWIFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9998888888776666666555554443
No 151
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.47 E-value=3.8e-12 Score=128.35 Aligned_cols=147 Identities=16% Similarity=0.172 Sum_probs=114.7
Q ss_pred HHHHHHhh-hhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhh--hhHHHHHHHHH
Q 010268 49 SFVGPAVQ-SLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFA--PNYYLLLFFRC 125 (514)
Q Consensus 49 ~~~~~~~~-~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~ 125 (514)
....|.+. +++|.+..+.+++.+...++..++.++.|+++||+|||++++.+..+..++.++.... .+.+.+.+..+
T Consensus 295 ~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (496)
T PRK03893 295 QALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLF 374 (496)
T ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHH
Confidence 45567766 5899999999999999999999999999999999999999888877766665544332 33344444445
Q ss_pred HHhh-hccchhhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHH
Q 010268 126 LVGL-GLGGGPVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLL 195 (514)
Q Consensus 126 l~G~-~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~ 195 (514)
+.+. +.+.......++.|.+|+++|++++++......+|..++|.+++.+.+.+||+..+...+....+.
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~~ 445 (496)
T PRK03893 375 FQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTFV 445 (496)
T ss_pred HHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHH
Confidence 4443 333335555788899999999999999999999999999999999999999998886655444333
No 152
>TIGR00895 2A0115 benzoate transport.
Probab=99.47 E-value=3.3e-13 Score=131.96 Aligned_cols=179 Identities=16% Similarity=0.097 Sum_probs=142.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHH
Q 010268 309 KSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMS 388 (514)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~ 388 (514)
+.........+.............|.+.++.+ .+....++..+...++..++.++.|++.||+|||+.+.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~ 86 (398)
T TIGR00895 17 RAIILSFLIMLMDGYDLAAMGFAAPAISAEWG----------LDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLL 86 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHhhccC----------CCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHH
Confidence 33344444444444555555666777765544 67767788888888999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHh
Q 010268 389 SMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVH 468 (514)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~ 468 (514)
.+.++.+++.+.....++.+...+..++.|++.+...+...+++.|.+|++.|++++|+......+|..++|.+.+.+.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 166 (398)
T TIGR00895 87 WSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIP 166 (398)
T ss_pred HHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhh
Confidence 99888888877777777777777778888898888899999999999999999999999999999999999999999999
Q ss_pred hcCchhHHHHHHHHHHHHHHHhhcccccc
Q 010268 469 GCHQTAALILFELVILLSGISVLLFPFET 497 (514)
Q Consensus 469 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (514)
..|+...+.+.+++.++..++.....+++
T Consensus 167 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (398)
T TIGR00895 167 VFGWRSLFYVGGIAPLLLLLLLMRFLPES 195 (398)
T ss_pred cccceeehhhhhhHHHHHHHHHHHhCCCC
Confidence 98988888877666655555555555543
No 153
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.47 E-value=1e-12 Score=131.77 Aligned_cols=179 Identities=15% Similarity=0.056 Sum_probs=145.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHH
Q 010268 310 STLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSS 389 (514)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~ 389 (514)
.+..+++..+....-...+..-.|.+..+.+ .+.++.++..+.+.++...+.+..|+++||+|||+.+..
T Consensus 7 ~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~----------~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~ 76 (495)
T PRK14995 7 TLVIIVLVYIPVAIDATVLHVAAPTLSMTLG----------ASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLML 76 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------CCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 3444555555555555556666777775544 666677888888889999999999999999999999999
Q ss_pred HHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeecccccc-CcchhhHHHHHHHHHHHHhHhHHHHHHHHHHh
Q 010268 390 MFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIY-PTSVRTTGVGVASSIGRIGGMVCPLVAVALVH 468 (514)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~ 468 (514)
+.++.+++.+.....++.+.+++.-++.|++.+...+.....+.+.+ |+++|++++|+......+|..+||.+.|.+.+
T Consensus 77 ~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~ 156 (495)
T PRK14995 77 GGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE 156 (495)
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999998888888888888888888889988888777777666655 67899999999999999999999999999999
Q ss_pred hcCchhHHHHHHHHHHHHHHHhhccccccc
Q 010268 469 GCHQTAALILFELVILLSGISVLLFPFETT 498 (514)
Q Consensus 469 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (514)
+.+|.+.|++...+.++..++..+..|+.+
T Consensus 157 ~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 157 HFYWGSVFLINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999998887777777666666666543
No 154
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.47 E-value=4e-12 Score=126.77 Aligned_cols=170 Identities=16% Similarity=0.131 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh-hhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHH-
Q 010268 33 YAGMGWISEAMEMMLLSFVGPAV-QSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLL- 110 (514)
Q Consensus 33 ~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~- 110 (514)
.+++..++............|.+ .+++|.|..+.++..+...++..++.+++|+++||+|||+.+.....+..++..+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~ 341 (467)
T PRK09556 262 LLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLG 341 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHH
Confidence 34444444444444455566755 4679999999999999999999999999999999999998876655444433322
Q ss_pred -HhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHH-HHHHHHHHHHHHhc----------
Q 010268 111 -SAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTV-GTILEAGIAWLVMP---------- 177 (514)
Q Consensus 111 -~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~~~~i~~~l~~---------- 177 (514)
....++.+...+.+++.|++.... ........|.+|+++||++.|+.+...++ |..++|.+.|.+.+
T Consensus 342 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~ 421 (467)
T PRK09556 342 VYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFG 421 (467)
T ss_pred HHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccccc
Confidence 223345666667788888654333 33335667999999999999999988886 77999999999998
Q ss_pred --ccchHHHHHHhHHHHHHHHHHHHHc
Q 010268 178 --RLGWRWLLGLSAFPSSLLLLLYSVT 202 (514)
Q Consensus 178 --~~gw~~~f~~~~~~~~i~~~~~~~~ 202 (514)
..||+..|++..+..++..+..+++
T Consensus 422 ~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 422 YTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred ccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999998877777765554433
No 155
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.46 E-value=5.8e-13 Score=133.94 Aligned_cols=175 Identities=9% Similarity=-0.004 Sum_probs=144.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHH
Q 010268 314 LWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFC 393 (514)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~ 393 (514)
.++..+.............|.+.++.+ .+....++..+.+.++..++.++.|++.||+|||+.+..+.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~p~~~~~~g----------~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 76 (485)
T TIGR00711 7 LMLGTFMAVLDSTIVNVAIPTIAGDLG----------SSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFA 76 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC----------CChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHH
Confidence 334444444444455566777765544 6777778889999999999999999999999999999999999
Q ss_pred HHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCch
Q 010268 394 CCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQT 473 (514)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~ 473 (514)
..++.+.....++.+.+.+..++.|++.+...+...+++.|.+|+++|+++.|+......+|..++|.+.|.+.++.+|.
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~ 156 (485)
T TIGR00711 77 FTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWR 156 (485)
T ss_pred HHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCce
Confidence 98888888888888888888888999988888999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhccccccc
Q 010268 474 AALILFELVILLSGISVLLFPFETT 498 (514)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (514)
+.+++.+.+.++..++..+..|+++
T Consensus 157 ~~f~~~~~~~~~~~~~~~~~~~~~~ 181 (485)
T TIGR00711 157 WIFLINVPIGIIVVVVAFFILPRDK 181 (485)
T ss_pred ehhhhhhHHHHHHHHHHHHHcCCcc
Confidence 8888877777666666555555543
No 156
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.46 E-value=1.2e-12 Score=130.03 Aligned_cols=175 Identities=17% Similarity=0.068 Sum_probs=142.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHH-HhhHHHH
Q 010268 309 KSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDR-LGRKLSM 387 (514)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~g~~~~~ 387 (514)
+.++.++...++..+.+|+...+++.|..+.+ ..+.+..+++.......++..++.+++|+++|| +|||+++
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~-------~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l 82 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQA-------GLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTM 82 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHH
Confidence 44555666677778888888888888875421 123778888899999999999999999999999 8999999
Q ss_pred HHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcch---hhHHHHHHHHHHHHhHhHHHHHHH
Q 010268 388 SSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSV---RTTGVGVASSIGRIGGMVCPLVAV 464 (514)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~---~~~~~g~~~~~~~~g~~~~p~i~g 464 (514)
..+.++.+++.+.+...++.+...+...+.+++.+...+...+++.+.+|++. |++++++.+...++|..++|.+.|
T Consensus 83 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g 162 (475)
T TIGR00924 83 VLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAG 162 (475)
T ss_pred HHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHH
Confidence 99999999888887776666666666777888888888999999999998654 888999999999999999999999
Q ss_pred HHHhhcCchhHHHHHHHHHHHHHHHh
Q 010268 465 ALVHGCHQTAALILFELVILLSGISV 490 (514)
Q Consensus 465 ~l~~~~g~~~~~~~~~~~~~~~~~~~ 490 (514)
.+.++.|+...|.+.++..+++.+..
T Consensus 163 ~l~~~~g~~~~f~~~~~~~~~~~l~~ 188 (475)
T TIGR00924 163 VIAENYGYHVGFNLAAVGMVIGLLTF 188 (475)
T ss_pred HHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 99998898888887775555544333
No 157
>PRK10054 putative transporter; Provisional
Probab=99.46 E-value=4.3e-13 Score=130.44 Aligned_cols=176 Identities=13% Similarity=0.004 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHH
Q 010268 311 TLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSM 390 (514)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~ 390 (514)
++.+....++.....+....+.+.+..+. .+.+..+.++..+...+..+++.++.|+++||+|||+++..+
T Consensus 9 ~~~l~~~~~~~~~g~~~~~~~l~~~l~~~---------~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~ 79 (395)
T PRK10054 9 TSALLASSLLLTIGRGATLPFMTIYLSRQ---------YSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLA 79 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHH
Confidence 44444555555556555555555554321 237888888888988999999999999999999999999888
Q ss_pred HHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhc
Q 010268 391 FFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGC 470 (514)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~ 470 (514)
.++.+++.+.+.+.++.+...+...+.+.+.+...+...++..|..|++.|++++|+.+...++|..++|.+.+.+.+ .
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~ 158 (395)
T PRK10054 80 ITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-Q 158 (395)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h
Confidence 888888777777766666555555555556566667788888999999999999999999999999999999999875 6
Q ss_pred CchhHHHHHHHHHHHHHHHhhccccc
Q 010268 471 HQTAALILFELVILLSGISVLLFPFE 496 (514)
Q Consensus 471 g~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (514)
++...+.+.+++.++..++..+..++
T Consensus 159 g~~~~f~~~~~~~~i~~i~~~~~~~~ 184 (395)
T PRK10054 159 SINLPFWLAAICSAFPLVFIQIWVQR 184 (395)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHhc
Confidence 78888887777776665555444433
No 158
>PRK03699 putative transporter; Provisional
Probab=99.45 E-value=4.4e-12 Score=123.66 Aligned_cols=167 Identities=11% Similarity=0.039 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHHHHHHHHhh-hhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhh
Q 010268 37 GWISEAMEMMLLSFVGPAVQ-SLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAP 115 (514)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~ 115 (514)
..++.......+....|.+. +++|+|..+.+++.+.+.++..++.++.|+++||+++|+.+.....+..+...+..+.+
T Consensus 213 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~ 292 (394)
T PRK03699 213 AALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTD 292 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcC
Confidence 33333333344455566665 66899999999999999999999999999999999999999888877777777776777
Q ss_pred hHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHH
Q 010268 116 NYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSL 194 (514)
Q Consensus 116 ~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i 194 (514)
+.+.+.+..++.|++.+.. +...++..+..+ +++++..+.......+|..++|.+.+.+.+..||+..+++.++..++
T Consensus 293 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~ 371 (394)
T PRK03699 293 DPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAV 371 (394)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHH
Confidence 7777777788888877665 555566667665 45678888888899999999999999999999999999988888777
Q ss_pred HHHHHHHccC
Q 010268 195 LLLLYSVTPE 204 (514)
Q Consensus 195 ~~~~~~~~~~ 204 (514)
..+..+.+++
T Consensus 372 ~~~~~~~~~~ 381 (394)
T PRK03699 372 VFVMCILLGF 381 (394)
T ss_pred HHHHHHHHHH
Confidence 7666555544
No 159
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.45 E-value=1.2e-12 Score=130.46 Aligned_cols=178 Identities=14% Similarity=0.173 Sum_probs=131.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHH
Q 010268 306 ELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKL 385 (514)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~ 385 (514)
+.++.+...+..++......+....+.|.+.++.+ .+..+.+...+...++..++.++.|+++||+|||+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g----------ls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~ 102 (476)
T PLN00028 33 PHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLN----------LTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRY 102 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH
Confidence 33455555555555555555666666677665544 77767777777888889999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHH
Q 010268 386 SMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVA 465 (514)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~ 465 (514)
++..+.++.++..+...+..+.+.+.+..++.|++.+... ....++.|.+|++.|++++|+.+....+|..+++.+.+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~ 181 (476)
T PLN00028 103 GSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPL 181 (476)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988888888877777777777666666677777766543 344567899999999999999998888888888777665
Q ss_pred HHh----h-----cCchhHHHHHHHHHHHHHHHhhccc
Q 010268 466 LVH----G-----CHQTAALILFELVILLSGISVLLFP 494 (514)
Q Consensus 466 l~~----~-----~g~~~~~~~~~~~~~~~~~~~~~~~ 494 (514)
+.. . .||...+.+.+++.++..++.+++.
T Consensus 182 i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 182 VFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 532 1 4788888888887776666655544
No 160
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.44 E-value=2e-13 Score=125.49 Aligned_cols=180 Identities=14% Similarity=0.058 Sum_probs=154.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHH
Q 010268 308 IKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSM 387 (514)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~ 387 (514)
++.++.+++.+.+..+.=-.+..-.|.+.++.+ ++..+.+.+.+.+.+...++-++.|.++||.+.|..+
T Consensus 28 ~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~----------lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm 97 (448)
T COG2271 28 IQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGG----------LSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFM 97 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcC----------CCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceee
Confidence 344444444444444444455566677665443 8888889999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHH--HH
Q 010268 388 SSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVA--VA 465 (514)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~--g~ 465 (514)
..+++++++..+++.+.++.+.+.++..+.|.+.+...|.+...+...+|+++||+..++.+...++|+.+.|.+. +.
T Consensus 98 ~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~ 177 (448)
T COG2271 98 AFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAF 177 (448)
T ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHH
Confidence 9999999999999999998888889999999999999999999999999999999999999999999999999999 99
Q ss_pred HHhhcCchhHHHHHHHHHHHHHHHhhcccccc
Q 010268 466 LVHGCHQTAALILFELVILLSGISVLLFPFET 497 (514)
Q Consensus 466 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (514)
+.++.+|...|++-++++++.+++.++..+++
T Consensus 178 ~~~~~~w~~~f~~pgiiaiival~~~~~~rd~ 209 (448)
T COG2271 178 FAFHGGWRAAFYFPGIIAIIVALILLFLLRDR 209 (448)
T ss_pred HHhccchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99998999999999999998888888776554
No 161
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.44 E-value=1.5e-12 Score=127.72 Aligned_cols=181 Identities=17% Similarity=0.126 Sum_probs=142.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHH
Q 010268 306 ELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKL 385 (514)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~ 385 (514)
..++.+...++.++...+..+......|.+.++.+ .+..+.++..+...++..++.++.|++.||+|||+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----------~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~ 78 (405)
T TIGR00891 9 AQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFG----------LTTVDAASLISAALISRWFGALMFGLWGDRYGRRL 78 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 33455555666666666666666667777665544 77778888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHH
Q 010268 386 SMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVA 465 (514)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~ 465 (514)
.+..+.++.+++.+...+.++.+...+..++.|++.+...+...+++.|.+|+++|+++.|+.+....+|..++|.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~ 158 (405)
T TIGR00891 79 PMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSL 158 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888887777777777778888899999888889999999999999999999999999999999999999999
Q ss_pred HHhhcC--chhHHHHHHHHHHHHHHHhhcccccc
Q 010268 466 LVHGCH--QTAALILFELVILLSGISVLLFPFET 497 (514)
Q Consensus 466 l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (514)
+.+..+ |...+.+.++..++. ++.....||+
T Consensus 159 l~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~~~~ 191 (405)
T TIGR00891 159 VVPVWGDGWRALFFISILPIIFA-LWLRKNIPEA 191 (405)
T ss_pred HHHhcCccHHHHHHHHHHHHHHH-HHHHHhCCCC
Confidence 988766 666665544333333 3333344554
No 162
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.44 E-value=3.8e-13 Score=131.45 Aligned_cols=148 Identities=16% Similarity=0.103 Sum_probs=130.2
Q ss_pred CcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceee
Q 010268 351 KSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYV 430 (514)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 430 (514)
.+..+.++..+...++..++.++.|++.||+|||+.+..+.++.+++.+...+..+.+...+..++.|++.+...+....
T Consensus 26 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 105 (399)
T TIGR00893 26 LSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPGIIL 105 (399)
T ss_pred CChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 77777889999999999999999999999999999999998888888877777778888888888999999999999999
Q ss_pred ccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhccccccc
Q 010268 431 YAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFPFETT 498 (514)
Q Consensus 431 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (514)
++.|.+|+++|++++|+......+|..++|.+.+.+.+..+|...+.+.+++.++..++..+..++++
T Consensus 106 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (399)
T TIGR00893 106 IVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPP 173 (399)
T ss_pred HHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCC
Confidence 99999999999999999999999999999999999999999998888888777776666655555443
No 163
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.42 E-value=1e-12 Score=126.94 Aligned_cols=143 Identities=13% Similarity=0.030 Sum_probs=120.3
Q ss_pred CcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhccc-----CcchhHHHHHHHHhhhcccc
Q 010268 351 KSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQ-----PKGLTTGLLFGARICITVTF 425 (514)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~ 425 (514)
.+..+.++..+...++..++.++.|+++||+|||+.+..+.++..+..+...... +.+...+..++.|++.+...
T Consensus 31 ~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 110 (365)
T TIGR00900 31 GSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFT 110 (365)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 6666778888899999999999999999999999999988887776665555444 66777777888888888888
Q ss_pred cceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcc
Q 010268 426 TVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLF 493 (514)
Q Consensus 426 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 493 (514)
+...+++.|.+|+++|++++|+.+....+|..++|.+.+.+.+..|+...+++.++..+++.+.....
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 111 PAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred HHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999998888877766665555444433
No 164
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.42 E-value=1.4e-12 Score=126.58 Aligned_cols=178 Identities=14% Similarity=0.046 Sum_probs=143.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHH
Q 010268 311 TLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSM 390 (514)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~ 390 (514)
++......+......+......|.+.++.+ .+..+.++..+...++..++.++.|++.||+|||+++..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g----------~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 74 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVG----------ISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFL 74 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcC----------CCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHH
Confidence 333444444445554455556666665444 7777778899999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhc
Q 010268 391 FFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGC 470 (514)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~ 470 (514)
..+.++..+...+.++.+.+.+..++.|++.+...+.......|..|+++|++++|+......++..++|.+.+.+.+..
T Consensus 75 ~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 154 (382)
T PRK10091 75 VALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEF 154 (382)
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhc
Confidence 99999988888888888888888888888888877777888899999889999999999999999999999999999988
Q ss_pred CchhHHHHHHHHHHHHHHHhhccccccc
Q 010268 471 HQTAALILFELVILLSGISVLLFPFETT 498 (514)
Q Consensus 471 g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (514)
+|...+.+.+++.++..+...+..|+.+
T Consensus 155 gwr~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 155 SWRYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9998888888777666655555555543
No 165
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.42 E-value=1.7e-12 Score=126.58 Aligned_cols=170 Identities=13% Similarity=0.026 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Q 010268 320 GNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLV 399 (514)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 399 (514)
.............|.+.++.+ .+....++..+...++..++.++.|+++||+|||+.+..+.++.++..+
T Consensus 14 ~~~~~~~~~~~~lp~~~~~~~----------~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~ 83 (392)
T PRK10473 14 LYPAGIDMYLVGLPRIAADLN----------ASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASL 83 (392)
T ss_pred HHHHHHHHHhhhHHHHHHHhC----------CCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHH
Confidence 333333333345666554433 6666677888888899999999999999999999999999888888887
Q ss_pred hhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHH
Q 010268 400 PLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILF 479 (514)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~ 479 (514)
.....++.+...+..++.|++.+...+...+++.|.+|+++|+++.|+.+....++..++|.+.+.+.+..+|...+.+.
T Consensus 84 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~ 163 (392)
T PRK10473 84 LCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTM 163 (392)
T ss_pred HHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHH
Confidence 77776666666666777888888778888899999999999999999999999999999999999988888888888888
Q ss_pred HHHHHHHHHHhhcccccccC
Q 010268 480 ELVILLSGISVLLFPFETTG 499 (514)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~ 499 (514)
+++.++..++.....+|+++
T Consensus 164 ~~~~~i~~~~~~~~~~~~~~ 183 (392)
T PRK10473 164 AAMGILVLLLSLFILKETRP 183 (392)
T ss_pred HHHHHHHHHHHHHHcCCCCC
Confidence 87777776666555566543
No 166
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.42 E-value=1.6e-11 Score=119.51 Aligned_cols=163 Identities=17% Similarity=0.135 Sum_probs=124.4
Q ss_pred HHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhh-hHHHH
Q 010268 42 AMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAP-NYYLL 120 (514)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~-~~~~l 120 (514)
...........|.+.+++|.+..+.|...+.+.++..++.++.|++.||+|||+.+..+..+..++.++....+ +...+
T Consensus 218 ~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 297 (393)
T PRK09705 218 NGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL 297 (393)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH
Confidence 33444445556666677899999999999999999999999999999999999999988887777766554333 22222
Q ss_pred HHHHHHHhhhccch-hhHHHHHHhhcC-CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccc-hHHHHHHhHHHHHHHHH
Q 010268 121 LFFRCLVGLGLGGG-PVLASWFLEFIP-APNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLG-WRWLLGLSAFPSSLLLL 197 (514)
Q Consensus 121 ~~~r~l~G~~~g~~-~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~g-w~~~f~~~~~~~~i~~~ 197 (514)
.-++.|++.+.. +.......+..+ +++|++..++.+....++..++|.+.+++.+..| |+..|++.++.+++..+
T Consensus 298 --~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK09705 298 --WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMI 375 (393)
T ss_pred --HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 234567777776 655556666664 5789999999999999999999999999999776 78888887777666654
Q ss_pred H-HHHccCCh
Q 010268 198 L-YSVTPESP 206 (514)
Q Consensus 198 ~-~~~~~~~~ 206 (514)
. ..+.||++
T Consensus 376 ~~~~~~~~~~ 385 (393)
T PRK09705 376 ITLRFAPARF 385 (393)
T ss_pred HHHHhccccc
Confidence 4 55556654
No 167
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.41 E-value=6.5e-12 Score=126.10 Aligned_cols=176 Identities=16% Similarity=0.138 Sum_probs=131.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHH
Q 010268 30 VLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGL 109 (514)
Q Consensus 30 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~ 109 (514)
.+....+..+.............|.+.+++|.+..+.++......++..++.+++|+++||+|||+.+.++.++.+++.+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 364 (481)
T TIGR00879 285 LFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLF 364 (481)
T ss_pred HHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 33334444444444344455667888889999999999999999999999999999999999999999998888777776
Q ss_pred HHhhh-----h------hHHHHHHHHHH-HhhhccchhhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 010268 110 LSAFA-----P------NYYLLLFFRCL-VGLGLGGGPVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMP 177 (514)
Q Consensus 110 ~~~~~-----~------~~~~l~~~r~l-~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~ 177 (514)
+..+. + +...+....++ .+.+.+..+....++.|.+|+++|++++++.....++|.+++|.+.+.+.+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~ 444 (481)
T TIGR00879 365 VLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLE 444 (481)
T ss_pred HHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66521 1 22222222222 223333335555777999999999999999999999999999999999998
Q ss_pred ccchHHHHHHhHHHHHHHHHHH-HHccCC
Q 010268 178 RLGWRWLLGLSAFPSSLLLLLY-SVTPES 205 (514)
Q Consensus 178 ~~gw~~~f~~~~~~~~i~~~~~-~~~~~~ 205 (514)
+.+|+..|++.++++++..+.. ++.||+
T Consensus 445 ~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 445 SIGVGGVFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred hcCccceehhHHHHHHHHHHHHheecccC
Confidence 8899999999888877776654 445654
No 168
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.41 E-value=2.2e-12 Score=125.91 Aligned_cols=156 Identities=19% Similarity=0.165 Sum_probs=118.8
Q ss_pred HHHHHHHHHHHHHHHHHhh-hhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHH-H-HHhh-
Q 010268 38 WISEAMEMMLLSFVGPAVQ-SLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAG-L-LSAF- 113 (514)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~-~-~~~~- 113 (514)
.+.............|.+. +++|.+..+.+.+.+...++..++.++.|+++||+|||+.+..+..+..+.. . ...+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 307 (394)
T TIGR00883 228 VIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALL 307 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444444445555566665 6789999999999999999999999999999999999998775554443322 2 2222
Q ss_pred -hhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHH-HHHHHHHHHHHHHHHHHHHhcccc-hHHHHHHhH
Q 010268 114 -APNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVI-FQTFWTVGTILEAGIAWLVMPRLG-WRWLLGLSA 189 (514)
Q Consensus 114 -~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~~~~i~~~l~~~~g-w~~~f~~~~ 189 (514)
.++.+.+++..++.|++.+.. +...+++.|.+|+++|+++.++ ......+|..++|.+++.+.++.| |+..++...
T Consensus 308 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~ 387 (394)
T TIGR00883 308 DSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLA 387 (394)
T ss_pred cCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHH
Confidence 245667777788888888776 6777899999999999999998 456667899999999999999888 888777666
Q ss_pred HHHH
Q 010268 190 FPSS 193 (514)
Q Consensus 190 ~~~~ 193 (514)
+..+
T Consensus 388 ~~~l 391 (394)
T TIGR00883 388 ALAL 391 (394)
T ss_pred HHHH
Confidence 5444
No 169
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.40 E-value=3.6e-12 Score=124.61 Aligned_cols=172 Identities=13% Similarity=0.102 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHH-hhHHHH
Q 010268 309 KSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRL-GRKLSM 387 (514)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~ 387 (514)
+.++..+.......+.+|+...++|.+..+. .+.+...++.....+.....++.+++|+++||+ |||+++
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~---------lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~i 79 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQ---------LKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAV 79 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHH
Confidence 4556666666777788888888888876432 237777778788888888899999999999999 999999
Q ss_pred HHHHHHHHHHhhhhhccc-CcchhHHHHHHHHhhhcccccceeeccccccCcc--hhhHHHHHHHHHHHHhHhHHHHHHH
Q 010268 388 SSMFFCCCIFLVPLLFQQ-PKGLTTGLLFGARICITVTFTVVYVYAPEIYPTS--VRTTGVGVASSIGRIGGMVCPLVAV 464 (514)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g~~~~p~i~g 464 (514)
.++.++..++.+.+.... +.........+..++.+...+...+++.|.+|++ .|.+++++.....++|+.++|.+.|
T Consensus 80 liG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g 159 (493)
T PRK15462 80 MLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACG 159 (493)
T ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHH
Confidence 999888887766554322 2222333333444566666677788999999875 6999999999999999999999999
Q ss_pred HHHhhcCchhHHHHHHHHHHHHHHH
Q 010268 465 ALVHGCHQTAALILFELVILLSGIS 489 (514)
Q Consensus 465 ~l~~~~g~~~~~~~~~~~~~~~~~~ 489 (514)
++.+..||...|.+.++..+++.+.
T Consensus 160 ~L~~~~Gw~~~F~iaaigm~l~li~ 184 (493)
T PRK15462 160 YAQEEYSWAMGFGLAAVGMIAGLVI 184 (493)
T ss_pred HHHhhhChHHHHHHHHHHHHHHHHH
Confidence 9999889988888766544444443
No 170
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.40 E-value=6.2e-13 Score=129.10 Aligned_cols=166 Identities=14% Similarity=0.064 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhh
Q 010268 322 AFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPL 401 (514)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 401 (514)
...........|.+.++.+ .+..+.++..+...++..++.++.|+++||+|||+.+..+.++.+++.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~g----------~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 77 (379)
T TIGR00881 8 YLVRKNFALAMPYLVEEIG----------LSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFF 77 (379)
T ss_pred HHhHHhhhhhhHHHHHHhC----------CCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHH
Confidence 3334444455565554433 777778889999999999999999999999999999999999988888888
Q ss_pred hcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHH-HHHHHHHhhcCchhHHHHHH
Q 010268 402 LFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCP-LVAVALVHGCHQTAALILFE 480 (514)
Q Consensus 402 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p-~i~g~l~~~~g~~~~~~~~~ 480 (514)
.+.++.+...+..++.|++.+...+...+++.|.+|+++|+++.|+.+....+|..++| .+.+.+.+..++...+++.+
T Consensus 78 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (379)
T TIGR00881 78 GFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPG 157 (379)
T ss_pred HHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHH
Confidence 87778888888888889998988999999999999999999999999999999999999 56666777778888888777
Q ss_pred HHHHHHHHHhhcccccc
Q 010268 481 LVILLSGISVLLFPFET 497 (514)
Q Consensus 481 ~~~~~~~~~~~~~~~~~ 497 (514)
++.++..++..+..+++
T Consensus 158 ~~~~~~~~~~~~~~~~~ 174 (379)
T TIGR00881 158 IIAIIVSLICFLLLRDS 174 (379)
T ss_pred HHHHHHHHHHheeeCCC
Confidence 77766666655555543
No 171
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.40 E-value=2e-12 Score=127.70 Aligned_cols=162 Identities=13% Similarity=0.076 Sum_probs=132.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHH
Q 010268 309 KSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMS 388 (514)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~ 388 (514)
+.+...++.++......+......|.+.++.+ .+..+.+...+...++..++.++.|++.||+|||+++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----------~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~ 87 (426)
T PRK12307 18 NALFSAWLGYVFDGFDFMLIFYIMYLIKADLG----------LTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMM 87 (426)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 33444445555555555555556666554433 67777788888899999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHh
Q 010268 389 SMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVH 468 (514)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~ 468 (514)
.+.++.+++.+...+..+.+.+.+.-++.|++.+..++....++.|.+|+++|+++.|+......+|..++|.+.+.+.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~ 167 (426)
T PRK12307 88 WSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE 167 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc
Confidence 99999988888877777888888888899999988889999999999999999999999999999999999999999988
Q ss_pred hcCchhHHHHHH
Q 010268 469 GCHQTAALILFE 480 (514)
Q Consensus 469 ~~g~~~~~~~~~ 480 (514)
..+|...+++..
T Consensus 168 ~~~w~~~f~i~~ 179 (426)
T PRK12307 168 AYGWRAAFFVGL 179 (426)
T ss_pred cCCHHHHHHHHH
Confidence 888888777644
No 172
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.40 E-value=3.3e-12 Score=125.23 Aligned_cols=148 Identities=18% Similarity=0.130 Sum_probs=124.0
Q ss_pred CcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceee
Q 010268 351 KSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYV 430 (514)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 430 (514)
.+....+...+...++..++.++.|+++||+|||+.+..+....+++.+.....++.+.+....++.|++.+...+...+
T Consensus 45 ~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~ 124 (406)
T PRK15402 45 AGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYA 124 (406)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHH
Confidence 66667777888889999999999999999999999999988888887777777777777777777778877777777888
Q ss_pred ccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhccccccc
Q 010268 431 YAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFPFETT 498 (514)
Q Consensus 431 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (514)
.+.|.+|++.+++..++......++..++|.+.+.+.+..+|...+++.+++.++..+..++..||++
T Consensus 125 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 125 AIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred HHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 88999999999999999988888999999999999999889998888888877776665555556554
No 173
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.40 E-value=3e-12 Score=125.01 Aligned_cols=180 Identities=12% Similarity=0.014 Sum_probs=136.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHH
Q 010268 309 KSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMS 388 (514)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~ 388 (514)
+..++......+............|.+.++.+ .++.+.+...+...++..++.++.|+++||+|||+.+.
T Consensus 8 ~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~----------~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~ 77 (394)
T PRK11652 8 NLLFMLVLLVAVGQMAQTIYVPAIADMARDLN----------VREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVIL 77 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHhC----------CCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHH
Confidence 44444444444444443333334555554443 77777888889999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHh
Q 010268 389 SMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVH 468 (514)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~ 468 (514)
.+..+.++..+.....++.+...+..++.|++.+...+....+..|.++.+.++.+.++.+....++..++|.+.+.+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~ 157 (394)
T PRK11652 78 VGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT 157 (394)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 98888888777777777777777777777877776666677778888888889999999999989999999999999999
Q ss_pred hcCchhHHHHHHHHHHHHHHHhhccccccc
Q 010268 469 GCHQTAALILFELVILLSGISVLLFPFETT 498 (514)
Q Consensus 469 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (514)
..||...+++.++..++..++..+..||++
T Consensus 158 ~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 158 LFGWRACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred ccChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 889988888877766655555445555543
No 174
>PRK09952 shikimate transporter; Provisional
Probab=99.39 E-value=5.7e-11 Score=117.34 Aligned_cols=156 Identities=14% Similarity=0.064 Sum_probs=114.8
Q ss_pred HHHH-HhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhh---h-hhHHHHHHHH
Q 010268 50 FVGP-AVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAF---A-PNYYLLLFFR 124 (514)
Q Consensus 50 ~~~~-~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~---~-~~~~~l~~~r 124 (514)
...| .+.+++|.+......+.....+...++.++.|+++||+|||+.++.+.++..++.+.... . ++.+.+++..
T Consensus 271 ~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (438)
T PRK09952 271 AFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSI 350 (438)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 3344 445678888877666666667777889999999999999999988887766554433322 1 2344445556
Q ss_pred HHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHH-HHHHHHHHHHHHHHHHHhccc--chHHHHHHhHHHHHHHHHHHH
Q 010268 125 CLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQ-TFWTVGTILEAGIAWLVMPRL--GWRWLLGLSAFPSSLLLLLYS 200 (514)
Q Consensus 125 ~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~~~~i~~~l~~~~--gw~~~f~~~~~~~~i~~~~~~ 200 (514)
++.|++.+.. +...+++.|.+|++.|+.+.++.. .+..+|..++|.+.+++.+.. +|+..+...++..++..+..+
T Consensus 351 ~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~ 430 (438)
T PRK09952 351 MLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTAL 430 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH
Confidence 6777777766 666788999999999999998854 445589999999999998743 488888888777777777766
Q ss_pred HccCC
Q 010268 201 VTPES 205 (514)
Q Consensus 201 ~~~~~ 205 (514)
.++|+
T Consensus 431 ~~~~~ 435 (438)
T PRK09952 431 LMKDN 435 (438)
T ss_pred Hcccc
Confidence 66654
No 175
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.38 E-value=4.4e-11 Score=116.08 Aligned_cols=147 Identities=10% Similarity=-0.042 Sum_probs=122.2
Q ss_pred HHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhh
Q 010268 50 FVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCLVGL 129 (514)
Q Consensus 50 ~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 129 (514)
...|.+.++.|.+..+.|.+.+...++..+..++.|++.||+|+|+.+..+.++.+++.++.+++++.+.+++..++.|+
T Consensus 226 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 305 (382)
T PRK11128 226 GFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCG 305 (382)
T ss_pred HHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 34455657799999999999999999999999999999999999999999999999988888889999999999999999
Q ss_pred hccch-hhHHHHHHhhcCCCchhHHHHHHH-HHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHH
Q 010268 130 GLGGG-PVLASWFLEFIPAPNRGFWMVIFQ-TFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLL 198 (514)
Q Consensus 130 ~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~ 198 (514)
+.+.. +....++.+. +++++++..+... ...++|..+||.++|.+.+.+|+ ..|+..+++.++.++.
T Consensus 306 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T PRK11128 306 TFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALFI 374 (382)
T ss_pred HHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 98877 5556777775 6667888888876 55678889999999999999888 4666666655554443
No 176
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.38 E-value=1.4e-10 Score=115.84 Aligned_cols=155 Identities=15% Similarity=0.171 Sum_probs=119.8
Q ss_pred HHHHHhhhhcCCCcchhHHHHH-HHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHH---Hhhh-hhHHHHHHHH
Q 010268 50 FVGPAVQSLWHLSPNQESLITS-VVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLL---SAFA-PNYYLLLFFR 124 (514)
Q Consensus 50 ~~~~~~~~~~~~s~~~~g~i~s-~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~---~~~~-~~~~~l~~~r 124 (514)
...|.+.+++|.|..+.|++.. ...++..++.+++|+++||+|+|+.+.++.++.+++.++ .+.. ++.+.+...-
T Consensus 244 ~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~ 323 (491)
T PRK11010 244 LTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAV 323 (491)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Confidence 3445566779999999999985 566899999999999999999999877766655544332 2333 3444455555
Q ss_pred HHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHHHHcc
Q 010268 125 CLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLLYSVTP 203 (514)
Q Consensus 125 ~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~ 203 (514)
++..++.|.. ....++..+..+++.+++..++.+...++|..+++.+.|.+.+..||+..|.+.++.+++.++...+++
T Consensus 324 ~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 324 FFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655555544 445678889999999999999999999999999999999999999999999998888888777665554
Q ss_pred C
Q 010268 204 E 204 (514)
Q Consensus 204 ~ 204 (514)
+
T Consensus 404 ~ 404 (491)
T PRK11010 404 Q 404 (491)
T ss_pred h
Confidence 4
No 177
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.38 E-value=3.5e-11 Score=119.28 Aligned_cols=152 Identities=19% Similarity=0.183 Sum_probs=134.9
Q ss_pred HHHHHHHhh-hhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 010268 48 LSFVGPAVQ-SLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCL 126 (514)
Q Consensus 48 ~~~~~~~~~-~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 126 (514)
+..++|.+. +++|.++...|++.+...+|..+++++.+++.+|+++++.+..+.++.+++.+.++++++.+..++..++
T Consensus 237 ~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l 316 (524)
T PF05977_consen 237 VWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFL 316 (524)
T ss_pred HHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 334567765 5689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHH
Q 010268 127 VGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLLY 199 (514)
Q Consensus 127 ~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~ 199 (514)
.|++.... ....+.+.+..|++.|||+++++++....+..+|..+.|.+.+.+|.+..+.+.++..++..++.
T Consensus 317 ~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 317 AGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 99988877 55567888999999999999999999999999999999999999999999988877665554443
No 178
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.37 E-value=4.9e-12 Score=123.30 Aligned_cols=145 Identities=9% Similarity=-0.055 Sum_probs=122.6
Q ss_pred CcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceee
Q 010268 351 KSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYV 430 (514)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 430 (514)
.+....++..+...+...+..++.|+++||+|||+.+..+.++.++..+.+...++.+.+.+..++.|++.+...+...+
T Consensus 43 ~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~ 122 (400)
T PRK11646 43 WAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTA 122 (400)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777788888888888888999999999999999999999999988888877777777777777888887777788888
Q ss_pred ccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhccccc
Q 010268 431 YAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFPFE 496 (514)
Q Consensus 431 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (514)
++.+.+|+++|++++|+......+|..+||.+.|.+. ..|+...+++.+++.++..++..+..|+
T Consensus 123 ~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 123 LVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 8999999999999999999999999999999999998 5688888887777666655554444444
No 179
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.37 E-value=7.1e-11 Score=118.58 Aligned_cols=159 Identities=16% Similarity=0.082 Sum_probs=120.4
Q ss_pred HHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhh--h-H-HHHHH
Q 010268 47 LLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAP--N-Y-YLLLF 122 (514)
Q Consensus 47 ~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~--~-~-~~l~~ 122 (514)
......|.+.++.|.+....++......+...++.++.|+++||+|||+.++.+..+.+++.+++.... + . .....
T Consensus 289 ~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~ 368 (479)
T PRK10077 289 VVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALL 368 (479)
T ss_pred HHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHH
Confidence 444566888888999988888888888888999999999999999999999999998888877765432 1 1 12223
Q ss_pred HHHHHhhhccch--hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHH------hcccchHHHHHHhHHHHHH
Q 010268 123 FRCLVGLGLGGG--PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLV------MPRLGWRWLLGLSAFPSSL 194 (514)
Q Consensus 123 ~r~l~G~~~g~~--~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l------~~~~gw~~~f~~~~~~~~i 194 (514)
+.++.+++.+.. +....++.|.+|+++|+.++|+......+|.++++.+.+.+ .+..+|+..|++.++++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (479)
T PRK10077 369 SMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVL 448 (479)
T ss_pred HHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHH
Confidence 344444444432 56678899999999999999999999999999887665544 3567899999888877776
Q ss_pred HHHH-HHHccCC
Q 010268 195 LLLL-YSVTPES 205 (514)
Q Consensus 195 ~~~~-~~~~~~~ 205 (514)
..++ +++.||+
T Consensus 449 ~~~~~~~~~~e~ 460 (479)
T PRK10077 449 AALFMWKFVPET 460 (479)
T ss_pred HHHHHHhccccC
Confidence 6555 4455665
No 180
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.37 E-value=8.6e-12 Score=123.82 Aligned_cols=159 Identities=14% Similarity=0.036 Sum_probs=118.7
Q ss_pred HHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhccc--
Q 010268 328 LVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQ-- 405 (514)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-- 405 (514)
+....|.+.++ + .+....++..+...++..++.++.|+++||+|||+++..+.++.++..+.+.+..
T Consensus 48 ~~~~~p~l~~~-g----------~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~ 116 (452)
T PRK11273 48 FALAMPYLVEQ-G----------FSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWA 116 (452)
T ss_pred HHHhhHHHHHc-C----------CCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcc
Confidence 44556665533 3 7888888899999999999999999999999999999999888877776665432
Q ss_pred --CcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhH-HHHHHHHHHhhcCchhHHHHHHHH
Q 010268 406 --PKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMV-CPLVAVALVHGCHQTAALILFELV 482 (514)
Q Consensus 406 --~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~-~p~i~g~l~~~~g~~~~~~~~~~~ 482 (514)
+.+...+..++.|++.+...+.....+.|.+|+++|++++|+.+....+|+.+ +|.+...+....+|...+++.+++
T Consensus 117 ~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~ 196 (452)
T PRK11273 117 TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFA 196 (452)
T ss_pred cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 34455556677788887777777777889999999999999999888888654 555433343444788788877777
Q ss_pred HHHHHHHhhcccccc
Q 010268 483 ILLSGISVLLFPFET 497 (514)
Q Consensus 483 ~~~~~~~~~~~~~~~ 497 (514)
.++..++..++.|++
T Consensus 197 ~~~~~~l~~~~~~~~ 211 (452)
T PRK11273 197 AILVALFAFAMMRDT 211 (452)
T ss_pred HHHHHHHHHHHccCC
Confidence 666655555555543
No 181
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.37 E-value=5.8e-12 Score=124.56 Aligned_cols=147 Identities=15% Similarity=0.067 Sum_probs=116.5
Q ss_pred CcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcc----cCcchhHHHHHHHHhhhccccc
Q 010268 351 KSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQ----QPKGLTTGLLFGARICITVTFT 426 (514)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~ 426 (514)
.++.+.++..+...++..++.++.|++.||+|||+.+..+.++.+++.+..... .+.+...+..++.|++.+..++
T Consensus 58 ~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~ 137 (438)
T TIGR00712 58 FSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWP 137 (438)
T ss_pred CCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchH
Confidence 788888889999999999999999999999999999888887777776655432 2233444555677777777777
Q ss_pred ceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHh-hcCchhHHHHHHHHHHHHHHHhhcccccc
Q 010268 427 VVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVH-GCHQTAALILFELVILLSGISVLLFPFET 497 (514)
Q Consensus 427 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (514)
.....+.|.+|+++|++++|+.+....+++.++|.+.+.+.+ ..+|...+++.+++.++..++.+++.+|+
T Consensus 138 ~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~ 209 (438)
T TIGR00712 138 PCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDT 209 (438)
T ss_pred HHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 777888899999999999999999999999999988776554 46788888888887777666555555554
No 182
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.36 E-value=3.4e-12 Score=104.71 Aligned_cols=137 Identities=15% Similarity=0.153 Sum_probs=115.8
Q ss_pred hhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcc
Q 010268 360 VFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTS 439 (514)
Q Consensus 360 ~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 439 (514)
.....++..++.++.+++.||+|||+.+..+.....+..+......+.+......++.+++.+...+....+..|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 44556788889999999999999999999888888777777766667777777778888888888888999999999999
Q ss_pred hhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhccccc
Q 010268 440 VRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFPFE 496 (514)
Q Consensus 440 ~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (514)
+|++..|+.+....+|..++|.+.+.+.+..++...+.+.+++.++..+..++..||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999999998888778888777777776666655543
No 183
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.36 E-value=8.6e-12 Score=120.55 Aligned_cols=174 Identities=16% Similarity=0.216 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHH
Q 010268 312 LLLWLVFFGNAFSYYGLVLLTTE-LNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSM 390 (514)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~ 390 (514)
+..++..+......+....+.|. +.++.+ .+..+.++..+...++..++.++.|+++||+|||+.+..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 73 (366)
T TIGR00886 4 FFSWFGFFLSFSVWFAFSPLAVQMIKDDLG----------LSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLS 73 (366)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhHHHHHHhC----------CCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHH
Confidence 34455555556666666667774 444333 7888888999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhccc-CcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhh
Q 010268 391 FFCCCIFLVPLLFQQ-PKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHG 469 (514)
Q Consensus 391 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~ 469 (514)
.++.+++.+.+.+.. +.+.+.+..++.|++.+ .++....++.|.+|+++|+++.++......+|..+++.+.+.+.+.
T Consensus 74 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 152 (366)
T TIGR00886 74 LLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGS 152 (366)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 999988888877777 77767677777777744 4455677889999999999999999988888888888888776652
Q ss_pred ----------cCchhHH-HHHHHHHHHHHHHhhccccc
Q 010268 470 ----------CHQTAAL-ILFELVILLSGISVLLFPFE 496 (514)
Q Consensus 470 ----------~g~~~~~-~~~~~~~~~~~~~~~~~~~~ 496 (514)
.+|...+ +..+++..+..++.....++
T Consensus 153 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (366)
T TIGR00886 153 LIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGAD 190 (366)
T ss_pred HHhcccccccccccchhHHHHHHHHHHHHHHHHHhccc
Confidence 3666666 33344444444444333333
No 184
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.36 E-value=2.8e-13 Score=125.77 Aligned_cols=185 Identities=14% Similarity=0.008 Sum_probs=153.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHH
Q 010268 310 STLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSS 389 (514)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~ 389 (514)
...++++.......--|.+..-.+...... +.+....+++.+.+.+...+.+++.|++.||++|++++.+
T Consensus 34 ~l~il~~vnlmny~Dr~~iagv~~~v~~~f----------ni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~v 103 (493)
T KOG1330|consen 34 TLVILCLVNLMNYADRYTIAGVLKEVQTYF----------NISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAV 103 (493)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHhc----------CCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEee
Confidence 334444444444444444444444443332 2777778999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhh
Q 010268 390 MFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHG 469 (514)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~ 469 (514)
|..+..++.+...+...+|.+.++-.+.|++.....|+..++++|.+|.++|++.+++.+....+|..+|-..++.+.+.
T Consensus 104 G~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~ 183 (493)
T KOG1330|consen 104 GIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASL 183 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccC
Confidence 99999999998888888899999999999999999999999999999999999999999999999999999988888887
Q ss_pred cC-chhHHHHHHHHHHHHHHHhhcccccccCcCCCC
Q 010268 470 CH-QTAALILFELVILLSGISVLLFPFETTGRGLSD 504 (514)
Q Consensus 470 ~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (514)
.+ |.+.+...+++.++.+++..++.+|++++..++
T Consensus 184 ~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~ 219 (493)
T KOG1330|consen 184 TFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDE 219 (493)
T ss_pred ccceEEEEEeehHHHHHHHHHHHhhccCcccccccc
Confidence 77 888899999999999988888888776654433
No 185
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.36 E-value=8.2e-12 Score=122.21 Aligned_cols=149 Identities=19% Similarity=0.167 Sum_probs=125.3
Q ss_pred CcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceee
Q 010268 351 KSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYV 430 (514)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 430 (514)
.+........+++.++..++.++.|+++||+|||+++..+..+.+++.+.....++.+.+.+.-++.|++.+...+....
T Consensus 48 ~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~ 127 (413)
T PRK15403 48 ADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYV 127 (413)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666677888888999999999999999999999999998888888877777778777777778888877655566677
Q ss_pred ccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcccccccC
Q 010268 431 YAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFPFETTG 499 (514)
Q Consensus 431 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (514)
...|.+|++++++.+++.+....++..++|.+++.+.++.||...|++.+++.++..+...+..||+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 128 TVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 888999999999999999999999999999999999998899999988888777776655555566543
No 186
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.36 E-value=5.4e-12 Score=120.91 Aligned_cols=147 Identities=11% Similarity=-0.078 Sum_probs=117.2
Q ss_pred CcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceee
Q 010268 351 KSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYV 430 (514)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 430 (514)
.+..+.++..+.+.++..++.+..|++.||+|||+++..+........+.....++.+.+.+.-++.|++.+. .+....
T Consensus 23 ~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~~~-~~~~~~ 101 (368)
T TIGR00903 23 VSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQPF-LLNAFA 101 (368)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHhHH-HHHHHH
Confidence 7777778888889999999999999999999999877655554444433223324666777777888888775 344555
Q ss_pred ccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhccccccc
Q 010268 431 YAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFPFETT 498 (514)
Q Consensus 431 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (514)
...|.+|+++|++++++......+|..+++.+.+.+.+..||...|.+.+++.++..++.++..||.+
T Consensus 102 ~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 102 PAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 56899999999999999999999999999999999999999999998888888777777776666654
No 187
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.35 E-value=7.1e-11 Score=115.33 Aligned_cols=139 Identities=12% Similarity=0.070 Sum_probs=118.3
Q ss_pred CCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccch-hhHH
Q 010268 60 HLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLA 138 (514)
Q Consensus 60 ~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~ 138 (514)
+.+....|.+.++..+...++.++.|++.||+|+|+.+.++..+.+++..+..++++.+.+++.+++.|++.... ....
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 566677899999999999999999999999999999999999988888888788889998888999999887655 3444
Q ss_pred HHHHhhcCCCchhHHHHH-HHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHH
Q 010268 139 SWFLEFIPAPNRGFWMVI-FQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLL 198 (514)
Q Consensus 139 ~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~ 198 (514)
.+..+..+++.++...+. .+....+|..+++.+++++.+..||+..|.+.++..++..+.
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 567777788778776665 677899999999999999999999999999988887776554
No 188
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.35 E-value=1.4e-11 Score=122.33 Aligned_cols=167 Identities=13% Similarity=0.037 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHH-HhhHHHH
Q 010268 309 KSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDR-LGRKLSM 387 (514)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~g~~~~~ 387 (514)
+.++.++...+...+.+|+...+++.|..+. .+.+...+......+.....+..+++|+++|| +|||+++
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~---------lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~ 84 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQ---------LGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTI 84 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------cCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHH
Confidence 5566666666777788888887777766432 23666666666666777777777899999999 9999999
Q ss_pred HHHHHHHHHHhhhhhcccCcch-hHHHHHHHHhhhcccccceeeccccccCcc--hhhHHHHHHHHHHHHhHhHHHHHHH
Q 010268 388 SSMFFCCCIFLVPLLFQQPKGL-TTGLLFGARICITVTFTVVYVYAPEIYPTS--VRTTGVGVASSIGRIGGMVCPLVAV 464 (514)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g~~~~p~i~g 464 (514)
..+.++.+++.+.+.+..+... +.+...+.+++.+...|...+++.|.+|++ +|+.++++.....++|..++|.+.|
T Consensus 85 ~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g 164 (489)
T PRK10207 85 VLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAP 164 (489)
T ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHH
Confidence 9999999888777766544333 335567778888888899999999999876 4578999999999999999999999
Q ss_pred HHHhhcCchhHHHHHHHHHH
Q 010268 465 ALVHGCHQTAALILFELVIL 484 (514)
Q Consensus 465 ~l~~~~g~~~~~~~~~~~~~ 484 (514)
++.++.||...|++.++...
T Consensus 165 ~l~~~~gw~~~F~i~~i~~~ 184 (489)
T PRK10207 165 VIADKFGYSVTYNLCGAGLI 184 (489)
T ss_pred HHHHhhChHHHHHHHHHHHH
Confidence 99999999888877554333
No 189
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.35 E-value=4.4e-12 Score=123.13 Aligned_cols=148 Identities=16% Similarity=0.135 Sum_probs=128.5
Q ss_pred CcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceee
Q 010268 351 KSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYV 430 (514)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 430 (514)
.+..+.+...+...++..++.++.|++.||+|||+.+..+.++.++..+.+...++.+...+..++.|++.+...+...+
T Consensus 23 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 102 (377)
T PRK11102 23 VSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVINA 102 (377)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777788888999999999999999999999999999999988888888777777777777788888888888888889
Q ss_pred ccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhccccccc
Q 010268 431 YAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFPFETT 498 (514)
Q Consensus 431 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (514)
++.|.+|+++|++++|+.+....+|..++|.+.+.+.+..+|...+.+.+++.++..++..+..+|++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 103 LMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETL 170 (377)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 99999999999999999999999999999999999999889988888887777777666655555543
No 190
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.34 E-value=1.4e-10 Score=112.92 Aligned_cols=148 Identities=16% Similarity=0.091 Sum_probs=111.6
Q ss_pred HHHHhhhhcCCCcchhHHHHHHHHH-HHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhh------hhhHHHHHHH
Q 010268 51 VGPAVQSLWHLSPNQESLITSVVFA-GMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAF------APNYYLLLFF 123 (514)
Q Consensus 51 ~~~~~~~~~~~s~~~~g~i~s~~~~-~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~------~~~~~~l~~~ 123 (514)
..+.+.+|.|++++++|++.+.... ...++.++.|++.||+|+|+.+..+..+.++..+.... .++...++..
T Consensus 230 ~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (390)
T TIGR02718 230 LSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSC 309 (390)
T ss_pred HhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHH
Confidence 3455566789999999999888764 66777899999999999999988877665333332221 1233334444
Q ss_pred HHHHhhhccch-hhHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHH
Q 010268 124 RCLVGLGLGGG-PVLASWFLEFIPA-PNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLL 198 (514)
Q Consensus 124 r~l~G~~~g~~-~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~ 198 (514)
.++.+++.+.. +...+.+.+..++ +++++.+++.+...++|..++|.+++.+.+..||+..|++.+++.++..+.
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 310 SAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 55556666666 5555666677665 889999999999999999999999999999999999999888777665443
No 191
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.34 E-value=1.7e-10 Score=113.18 Aligned_cols=161 Identities=20% Similarity=0.254 Sum_probs=137.3
Q ss_pred HHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCCh--HHHHHHHHHHHHHHHHHhh--------h
Q 010268 45 MMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRR--KGFLITAIVTSAAGLLSAF--------A 114 (514)
Q Consensus 45 ~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r--~~l~~~~~~~~~~~~~~~~--------~ 114 (514)
..........-.+++|++..+...+.-+..+...++++++|++.||+|.| ++++++++++.+..+...+ .
T Consensus 298 ~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~ 377 (477)
T PF11700_consen 298 NTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGL 377 (477)
T ss_pred HHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCc
Confidence 34444445556679999999999999999999999999999999999999 8888888777554444444 5
Q ss_pred hhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccc-hHHHHHHhHHHH
Q 010268 115 PNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLG-WRWLLGLSAFPS 192 (514)
Q Consensus 115 ~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~g-w~~~f~~~~~~~ 192 (514)
++.+.+++.-++.|+..|.. +...++.++..|+++.+..+|++....-....+||++.+.+.+..| -|..+....++.
T Consensus 378 ~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf 457 (477)
T PF11700_consen 378 KSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLF 457 (477)
T ss_pred ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 67788999999999999998 7777999999999999999999999999999999999999988776 899999888888
Q ss_pred HHHHHHHHHccCC
Q 010268 193 SLLLLLYSVTPES 205 (514)
Q Consensus 193 ~i~~~~~~~~~~~ 205 (514)
++.++++++++.+
T Consensus 458 ~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 458 LIGLILLFFVDVE 470 (477)
T ss_pred HHHHHHHhhccch
Confidence 8888887777654
No 192
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.34 E-value=3.9e-11 Score=116.07 Aligned_cols=146 Identities=14% Similarity=0.065 Sum_probs=111.4
Q ss_pred CCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcc-----cCcchhHHHHHHHHhhhccc
Q 010268 350 GKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQ-----QPKGLTTGLLFGARICITVT 424 (514)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~ 424 (514)
+.+..+.++..++..++..++++..|++.||+|.|+++.++.++.++..+...+. ++.+.+.+..++.|++ +..
T Consensus 66 ~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~ 144 (462)
T PRK15034 66 NFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GAN 144 (462)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHh
Confidence 3788888888899999999999999999999999999999888888777766654 5667777778888887 667
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHH-----hhcC-------------chhHHHHHHHHHHHH
Q 010268 425 FTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALV-----HGCH-------------QTAALILFELVILLS 486 (514)
Q Consensus 425 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~-----~~~g-------------~~~~~~~~~~~~~~~ 486 (514)
++.....+++.+|+++||+++|+....+++|..+++++.+.+. +..| +....++...+.++.
T Consensus 145 f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~ 224 (462)
T PRK15034 145 FASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIA 224 (462)
T ss_pred HHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHH
Confidence 8888899999999999999999997777777766666555433 2222 344455666666666
Q ss_pred HHHhhccccc
Q 010268 487 GISVLLFPFE 496 (514)
Q Consensus 487 ~~~~~~~~~~ 496 (514)
+++.++..++
T Consensus 225 ~i~~~~~~~~ 234 (462)
T PRK15034 225 TIAAWSGMND 234 (462)
T ss_pred HHHHHHhCCC
Confidence 6565555443
No 193
>PRK11043 putative transporter; Provisional
Probab=99.33 E-value=1.8e-11 Score=119.84 Aligned_cols=144 Identities=15% Similarity=0.111 Sum_probs=120.7
Q ss_pred CcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceee
Q 010268 351 KSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYV 430 (514)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 430 (514)
.++.+.++..++..++..++.++.|+++||+|||+.+..+..+..+..+...+.++.+...+..++.|++.+...+...+
T Consensus 38 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~ 117 (401)
T PRK11043 38 TSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQA 117 (401)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 77777888999999999999999999999999999999988888877777777777777666677777776666666677
Q ss_pred ccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhccc
Q 010268 431 YAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFP 494 (514)
Q Consensus 431 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 494 (514)
+..|.+|++.+++..+..+....++..++|.+.+.+.+..||...+++.+++.++..+......
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 181 (401)
T PRK11043 118 LVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLK 181 (401)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcC
Confidence 8889999888999999999888999999999999999999998888888777766665554443
No 194
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.32 E-value=6.7e-11 Score=104.45 Aligned_cols=177 Identities=18% Similarity=0.121 Sum_probs=132.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHH
Q 010268 27 QLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSA 106 (514)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~ 106 (514)
||..++......... ...+.++...|.+.+.+|+|.+|...+..+..+|..+ .++.|.+.|++|+|.++++|.+...+
T Consensus 1 rW~~l~a~~~v~~~~-Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~ 78 (250)
T PF06813_consen 1 RWLSLVASIWVQLCS-GTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFV 78 (250)
T ss_pred ChhhHHHHHHHHHhc-CcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 465555554444333 3556788889999999999999999999999999887 59999999999999999999999999
Q ss_pred HHHHHhhh-------hhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 010268 107 AGLLSAFA-------PNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPR 178 (514)
Q Consensus 107 ~~~~~~~~-------~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~ 178 (514)
|+.+...+ +++|.+.+..++.|.+.+.. .++.....+.+| ++||.+.|+.-...+++..+-..+...+.+.
T Consensus 79 GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 79 GYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 99887654 35778887788888776665 444455567776 5899999999999999998887777666554
Q ss_pred cchHHHHHHhHHHHHHHHHHHHHccCCh
Q 010268 179 LGWRWLLGLSAFPSSLLLLLYSVTPESP 206 (514)
Q Consensus 179 ~gw~~~f~~~~~~~~i~~~~~~~~~~~~ 206 (514)
-.-+..++....+.++.++..++++..|
T Consensus 158 ~~~~fll~la~~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 158 DPSSFLLFLAVLPAVVCLVAMFFVRPVP 185 (250)
T ss_pred ChHHHHHHHHHHHHHHHHHHhhheeccC
Confidence 2234444444445555555555554443
No 195
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.32 E-value=6e-11 Score=119.41 Aligned_cols=170 Identities=16% Similarity=0.109 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCCcchhHH------------HHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHH
Q 010268 37 GWISEAMEMMLLSFVGPAVQSLWHLSPNQESL------------ITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVT 104 (514)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~------------i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~ 104 (514)
.++...+..+......|.+.++.|.+....+. ...+..++..++.++.++++||+|||+.++++..+.
T Consensus 296 ~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~ 375 (502)
T TIGR00887 296 SWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFIL 375 (502)
T ss_pred HHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHH
Confidence 33333333333444467777888887643221 223344566678889999999999999998888877
Q ss_pred HHHHHHHhhhhh----HHHHHHHHHHHhh-hccchhhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcc-
Q 010268 105 SAAGLLSAFAPN----YYLLLFFRCLVGL-GLGGGPVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPR- 178 (514)
Q Consensus 105 ~~~~~~~~~~~~----~~~l~~~r~l~G~-~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~- 178 (514)
+++..+..+..+ ...+....+...+ +.+..+....+..|.+|.+.|+++.++.+....+|.+++|.+.+.+.+.
T Consensus 376 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 455 (502)
T TIGR00887 376 TVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHG 455 (502)
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccc
Confidence 777666554321 1112222122222 2223355567789999999999999999999999999999999988773
Q ss_pred ---------cchHHHHHHhHHHHHHHHHHHHHccCCh
Q 010268 179 ---------LGWRWLLGLSAFPSSLLLLLYSVTPESP 206 (514)
Q Consensus 179 ---------~gw~~~f~~~~~~~~i~~~~~~~~~~~~ 206 (514)
.++...|++.++..++..+..+++||++
T Consensus 456 ~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~ 492 (502)
T TIGR00887 456 DPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETK 492 (502)
T ss_pred cccccccccccchHHHHHHHHHHHHHHHHheEeccCC
Confidence 3456677877777777666666778864
No 196
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.31 E-value=3.8e-11 Score=120.03 Aligned_cols=170 Identities=15% Similarity=0.043 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHH-HhhHHHH
Q 010268 309 KSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDR-LGRKLSM 387 (514)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~g~~~~~ 387 (514)
+.++..+...++..+.+|....+.+.+..+. .+.+...+...............+++|+++|| +|||+.+
T Consensus 21 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~---------lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~ 91 (500)
T PRK09584 21 KAFYLIFSIELWERFGYYGLQGIMAVYLVKQ---------LGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVI 91 (500)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH
Confidence 4456666677777788888888888776332 22555555555544444444555789999999 5999999
Q ss_pred HHHHHHHHHHhhhhhcccC-cchhHHHHHHHHhhhcccccceeeccccccCcch--hhHHHHHHHHHHHHhHhHHHHHHH
Q 010268 388 SSMFFCCCIFLVPLLFQQP-KGLTTGLLFGARICITVTFTVVYVYAPEIYPTSV--RTTGVGVASSIGRIGGMVCPLVAV 464 (514)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~--~~~~~g~~~~~~~~g~~~~p~i~g 464 (514)
..+.++.+++...+.+..+ .+...+...+.+++.+...+...++..|.+|++. ++.++++.+...++|..++|.+.|
T Consensus 92 ~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g 171 (500)
T PRK09584 92 MLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATP 171 (500)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHH
Confidence 9999888887766665433 3334455567778888888888889999998543 456788889999999999999999
Q ss_pred HHHhhcCchhHHHHHHHHHHHHH
Q 010268 465 ALVHGCHQTAALILFELVILLSG 487 (514)
Q Consensus 465 ~l~~~~g~~~~~~~~~~~~~~~~ 487 (514)
++.++.||...|.+.++..+++.
T Consensus 172 ~l~~~~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 172 WLAAKYGWSVAFALSVVGMLITV 194 (500)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHH
Confidence 99999999988887765544444
No 197
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.29 E-value=9.5e-12 Score=124.20 Aligned_cols=148 Identities=10% Similarity=0.010 Sum_probs=123.9
Q ss_pred CCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhc--ccCcchhHHHHHHHHhhhccccc
Q 010268 349 SGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLF--QQPKGLTTGLLFGARICITVTFT 426 (514)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~ 426 (514)
.+.+....+...+.+.++..++.++.|++.||+|+|+.+..+.++.++..++... ..+.+..++.-++.|++.+...+
T Consensus 71 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~ 150 (465)
T TIGR00894 71 FKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSP 150 (465)
T ss_pred CCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchh
Confidence 3466667788889999999999999999999999999999888887776655432 23455667777888999999999
Q ss_pred ceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhh-cCchhHHHHHHHHHHHHHHHhhccccc
Q 010268 427 VVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHG-CHQTAALILFELVILLSGISVLLFPFE 496 (514)
Q Consensus 427 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (514)
....++.|.+|+++|++++|+......+|..++|.+.+.+.+. .+|...|.+.+++.++..++.+...++
T Consensus 151 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~ 221 (465)
T TIGR00894 151 ATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPAD 221 (465)
T ss_pred hHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999988 499988988888777666655555443
No 198
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.29 E-value=1.5e-10 Score=114.74 Aligned_cols=134 Identities=18% Similarity=0.187 Sum_probs=106.5
Q ss_pred HHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHH
Q 010268 48 LSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFA-PNYYLLLFFRCL 126 (514)
Q Consensus 48 ~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l 126 (514)
.....+.+.++..-+..+.+++.+...++..++.+++++++||+|+|+.+..+..+.+++.++..+. ++.+.+++..++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (437)
T TIGR00792 241 KNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIIL 320 (437)
T ss_pred HcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHH
Confidence 3334454444322256677888888899999999999999999999999999998888887777665 356677778888
Q ss_pred Hhhhccch-hhHHHHHHhhcC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 010268 127 VGLGLGGG-PVLASWFLEFIP-------APNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGW 181 (514)
Q Consensus 127 ~G~~~g~~-~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw 181 (514)
.|++.+.. +...+++.|..+ ++++|.+.|+.+....+|..+++.+.+.+.+..||
T Consensus 321 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 321 AGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 89988877 666677777654 55689999999999999999999999999876665
No 199
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.28 E-value=2.6e-11 Score=117.93 Aligned_cols=142 Identities=15% Similarity=-0.037 Sum_probs=109.7
Q ss_pred CcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceee
Q 010268 351 KSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYV 430 (514)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 430 (514)
.+....++..+.+.+...+..++.|+++||+|||+++..+.++.++..+.+....+. .+..++.|++.+...|...+
T Consensus 35 ~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a 111 (393)
T PRK11195 35 YPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYG 111 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
Confidence 555556788888889999999999999999999999999988887766554443332 44456788888999999999
Q ss_pred ccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcccccc
Q 010268 431 YAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFPFET 497 (514)
Q Consensus 431 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (514)
++.|.+|+++|++++|+......++..+||.++|.+.+.. +...+.+.+.+.+++ ++..+..||.
T Consensus 112 ~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~-~~~~~~l~~~ 176 (393)
T PRK11195 112 ILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLA-ALFNLFIPRL 176 (393)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH-HHHHhcCCCC
Confidence 9999999999999999999999999999999999999864 444444444333333 2333444544
No 200
>PRK15075 citrate-proton symporter; Provisional
Probab=99.28 E-value=3.8e-10 Score=111.48 Aligned_cols=143 Identities=17% Similarity=0.167 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHHHHhhhh-cCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHH-HHh---hh
Q 010268 40 SEAMEMMLLSFVGPAVQSL-WHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGL-LSA---FA 114 (514)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~-~~~---~~ 114 (514)
.............|.+.++ +|.+..+.+++.....++..++.+++|+++||+|||+.++.+..+..+... ... ..
T Consensus 249 ~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 328 (434)
T PRK15075 249 MTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAA 328 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3344444555567776654 799999999999999999999999999999999999998776554432221 111 12
Q ss_pred hhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHH-HHHHHHHHHHHHHHHHhcccchH
Q 010268 115 PNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQT-FWTVGTILEAGIAWLVMPRLGWR 182 (514)
Q Consensus 115 ~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~~~~i~~~l~~~~gw~ 182 (514)
+++..+.+..++.|++.+.. +....++.|.+|++.|+.++++... +..++..++|.+.+++.+..|++
T Consensus 329 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 329 PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 34444444455566666665 4455788999999999999998544 44445778999999999988864
No 201
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.27 E-value=4.9e-10 Score=108.05 Aligned_cols=181 Identities=16% Similarity=0.181 Sum_probs=135.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHH
Q 010268 25 KFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVT 104 (514)
Q Consensus 25 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~ 104 (514)
..|+...+.+.+....+.-+......+...+.++-|++..+.-+......+...+..+++..+.||+|||+.++++..++
T Consensus 266 ~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~ 345 (485)
T KOG0569|consen 266 TLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLM 345 (485)
T ss_pred chhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 34444444444444444444556666777888999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHhhhh----hH--H---HHHHHHHHH--hhhccchhhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 010268 105 SAAGLLSAFAP----NY--Y---LLLFFRCLV--GLGLGGGPVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAW 173 (514)
Q Consensus 105 ~~~~~~~~~~~----~~--~---~l~~~r~l~--G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~ 173 (514)
.+..+++.... .. | ..+++.++. .++.|..|...-+.+|.+|++.|+.++++.....-++..+-.....
T Consensus 346 ~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp 425 (485)
T KOG0569|consen 346 AVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFP 425 (485)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877765431 12 1 123333333 3445555777788899999999999999999888888888777777
Q ss_pred HHhcccchHHHHHHhHHHHHHH-HHHHHHccCCh
Q 010268 174 LVMPRLGWRWLLGLSAFPSSLL-LLLYSVTPESP 206 (514)
Q Consensus 174 ~l~~~~gw~~~f~~~~~~~~i~-~~~~~~~~~~~ 206 (514)
.+.+.+|- +.|++..+++++. +..++.+||+.
T Consensus 426 ~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 426 PLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETK 458 (485)
T ss_pred HHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccC
Confidence 77776776 6777777776666 45578899984
No 202
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.27 E-value=8.3e-12 Score=113.54 Aligned_cols=150 Identities=16% Similarity=0.150 Sum_probs=137.3
Q ss_pred CcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceee
Q 010268 351 KSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYV 430 (514)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 430 (514)
....+.++++....+..++.+++.|.+.||+|+|..+++++..+..+.+++.+.++++.+.++=.+.|++.........+
T Consensus 103 ~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsgla 182 (464)
T KOG3764|consen 103 RENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLA 182 (464)
T ss_pred ccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHH
Confidence 45556689999999999999999999999999999999999999999999999999998899999999999999999999
Q ss_pred ccccccCcch-hhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcccccccCc
Q 010268 431 YAPEIYPTSV-RTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFPFETTGR 500 (514)
Q Consensus 431 ~~~~~~p~~~-~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (514)
++++.+|.+. |++++|+...+.++|..+||..+|.++|..|.+.+|+++++++++-+.+.++..+.++.+
T Consensus 183 mlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~ 253 (464)
T KOG3764|consen 183 MLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMD 253 (464)
T ss_pred HHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccC
Confidence 9999999776 799999999999999999999999999999999999999999999888877776544443
No 203
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.26 E-value=5.3e-10 Score=105.65 Aligned_cols=168 Identities=11% Similarity=0.075 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhH
Q 010268 38 WISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNY 117 (514)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~ 117 (514)
.+.+.++.. ++.....+-++-+.+....|.+.+...+.-++.-.+..++.+|+|.|+.++++..++++=..+++++++.
T Consensus 234 ~~Y~vfdqq-f~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~ 312 (412)
T PF01306_consen 234 AIYDVFDQQ-FPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNP 312 (412)
T ss_dssp HHHHHHHHH-HHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SH
T ss_pred HHHHHHHHH-HHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcch
Confidence 344444444 3333344444445566779999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHH-HHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHH
Q 010268 118 YLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVI-FQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLL 195 (514)
Q Consensus 118 ~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~ 195 (514)
+.+.+.+.+.|+-.+.. .....|+++.+|++-.++...+ .+...++|..+.+.++|.+.|+.|.+..|++.+.+.+..
T Consensus 313 ~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~ 392 (412)
T PF01306_consen 313 WVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPF 392 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHH
Confidence 99999999999999988 6667999999999888777777 478889999999999999999999999999988887776
Q ss_pred HHH-HHHccCCh
Q 010268 196 LLL-YSVTPESP 206 (514)
Q Consensus 196 ~~~-~~~~~~~~ 206 (514)
.++ .+.+++++
T Consensus 393 ~li~~f~l~~~~ 404 (412)
T PF01306_consen 393 TLISAFTLKKDK 404 (412)
T ss_dssp HHHHHHHS--SS
T ss_pred HHHheeeecCCC
Confidence 555 55565543
No 204
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.25 E-value=6.4e-10 Score=108.81 Aligned_cols=148 Identities=11% Similarity=0.145 Sum_probs=103.4
Q ss_pred HHHhhhhcCCCcchhHHHHHHHH-HHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHH---hhh-hhHHHHHHHHHH
Q 010268 52 GPAVQSLWHLSPNQESLITSVVF-AGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLS---AFA-PNYYLLLFFRCL 126 (514)
Q Consensus 52 ~~~~~~~~~~s~~~~g~i~s~~~-~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~---~~~-~~~~~l~~~r~l 126 (514)
.|.+.+++|+++.+.|++.+... ++..++.+++|++.||+|+|+.+.++..+..+..+.. ++. ++.+.+++.-++
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 312 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGI 312 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 35567779999999999987654 5688999999999999999998877776655544332 343 355555555544
Q ss_pred Hh----hhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHHHH
Q 010268 127 VG----LGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLLYSV 201 (514)
Q Consensus 127 ~G----~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 201 (514)
.+ ++.+.. .....++.+..| ++..++++...++|..+++.+++.+.+.+||+..|.+.++++++.+++...
T Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 313 ENLCGGMGTAAFVALLMALCNRSFS----ATQYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCc----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 33 334333 223344445444 444566666677888877788999999999999999998888877666544
Q ss_pred cc
Q 010268 202 TP 203 (514)
Q Consensus 202 ~~ 203 (514)
.+
T Consensus 389 ~~ 390 (402)
T PRK11902 389 MR 390 (402)
T ss_pred Hh
Confidence 43
No 205
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.24 E-value=1.1e-10 Score=114.00 Aligned_cols=170 Identities=15% Similarity=0.032 Sum_probs=133.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHH
Q 010268 311 TLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSM 390 (514)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~ 390 (514)
++.++..++...+.+.......|.+.++.+ .+..+.++..+...++..++++..|++.||+|||+.+..+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~----------~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g 74 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFT----------LTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLG 74 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHH
Confidence 445555556556555555566677765544 7777889999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhc---ccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHH
Q 010268 391 FFCCCIFLVPLLF---QQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALV 467 (514)
Q Consensus 391 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~ 467 (514)
.++.+++.+.+.. .++.+......++.|++.+...+....++.+..|++++++..++.+.+..+|..++|.+.+.+.
T Consensus 75 ~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 75 LFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988887766543 3456666777788899999998888899999999999999999999999999999999999885
Q ss_pred hh--------------------------cCchhHHHHHHHHHHHHHHHh
Q 010268 468 HG--------------------------CHQTAALILFELVILLSGISV 490 (514)
Q Consensus 468 ~~--------------------------~g~~~~~~~~~~~~~~~~~~~ 490 (514)
.. .+|..+|++.+++.++..++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 155 LSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred hcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 246677777777666554443
No 206
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.24 E-value=7.3e-10 Score=103.59 Aligned_cols=155 Identities=15% Similarity=0.119 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh---hcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHH
Q 010268 33 YAGMGWISEAMEMMLLSFVGPAVQS---LWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGL 109 (514)
Q Consensus 33 ~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~ 109 (514)
...+..++............+.+.+ .+|.++.+.++..+.+..+..++.+..+++.||+|+|+.+.++..+..++.+
T Consensus 144 l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~ 223 (310)
T TIGR01272 144 LGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSI 223 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 3444445444344444444455543 3699999999999999999999999999999999999999888888877776
Q ss_pred HHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHh
Q 010268 110 LSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLS 188 (514)
Q Consensus 110 ~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~ 188 (514)
+....++...+ ..-++.|++.+.. |...+...+..++ +.+++.++. ....+|.+++|++.|.+.+..|.+..|++.
T Consensus 224 l~~~~~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~ 300 (310)
T TIGR01272 224 GAALTHGYVAM-WFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALP 300 (310)
T ss_pred HHHHcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHH
Confidence 66555543333 3455788888887 7777777777664 456677775 566789999999999999988988888754
Q ss_pred HH
Q 010268 189 AF 190 (514)
Q Consensus 189 ~~ 190 (514)
.+
T Consensus 301 ~~ 302 (310)
T TIGR01272 301 VP 302 (310)
T ss_pred HH
Confidence 43
No 207
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.24 E-value=9.7e-10 Score=108.53 Aligned_cols=157 Identities=12% Similarity=0.004 Sum_probs=101.0
Q ss_pred HHHHHHHHh-hhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHh--h--hhhHHHHH
Q 010268 47 LLSFVGPAV-QSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSA--F--APNYYLLL 121 (514)
Q Consensus 47 ~~~~~~~~~-~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~--~--~~~~~~l~ 121 (514)
.+....|.+ .+++|.+..+.+...++..++..+++++.|+++||+|||+.+.++..+.++...... . .++....+
T Consensus 261 ~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (432)
T PRK10406 261 TFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAF 340 (432)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHH
Confidence 344445654 456899999999999988888899999999999999999988776654433322111 1 12233222
Q ss_pred HHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHH-HHHHHHHHHHHHhcccc-hHHHHHHhHHHHHHHHHH
Q 010268 122 FFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTV-GTILEAGIAWLVMPRLG-WRWLLGLSAFPSSLLLLL 198 (514)
Q Consensus 122 ~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~~~~i~~~l~~~~g-w~~~f~~~~~~~~i~~~~ 198 (514)
....+.+++.+.. +....+..|++|++.|+.++|+.+...++ +....|.+.+.+ +..| |...++..++..++.++.
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~ 419 (432)
T PRK10406 341 GLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLV 419 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHH
Confidence 2222222333333 34457789999999999999998766554 344577777755 4345 555666666666666555
Q ss_pred HHHccC
Q 010268 199 YSVTPE 204 (514)
Q Consensus 199 ~~~~~~ 204 (514)
.+++++
T Consensus 420 ~~~l~~ 425 (432)
T PRK10406 420 SLMLHR 425 (432)
T ss_pred HHHhhh
Confidence 555443
No 208
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.23 E-value=2.3e-10 Score=105.80 Aligned_cols=178 Identities=16% Similarity=0.065 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHH
Q 010268 307 LIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLS 386 (514)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~ 386 (514)
..+.++.............+......+.+.++. ++++.+.+++..+..+.+.+.++..|.+.||+|.|+.
T Consensus 12 ~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~----------~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~ 81 (417)
T COG2223 12 ARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDF----------GLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKW 81 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc----------CCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHH
Confidence 335555555544444444444444445554433 4899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhcccCc---chhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHH
Q 010268 387 MSSMFFCCCIFLVPLLFQQPK---GLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVA 463 (514)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~ 463 (514)
...+.++..+-.+.+.+.... +.++++.++.|++ ++.+......+++.+|++++|.++|+.. .+++|..+..++.
T Consensus 82 ~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~ 159 (417)
T COG2223 82 TILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVA 159 (417)
T ss_pred HHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHH
Confidence 998888877766666544333 3555566666554 5667888999999999999999999999 9999999999999
Q ss_pred HHHHhhcC---chhHHHHHHHHHHHHHHHhhccccc
Q 010268 464 VALVHGCH---QTAALILFELVILLSGISVLLFPFE 496 (514)
Q Consensus 464 g~l~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (514)
+.+....+ |+....+..+..++..+..++..++
T Consensus 160 P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d 195 (417)
T COG2223 160 PLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMND 195 (417)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999888 7877778877777777776665543
No 209
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.22 E-value=1.6e-10 Score=114.15 Aligned_cols=174 Identities=18% Similarity=0.236 Sum_probs=154.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhC--ChHHHHHHHHHHHHH
Q 010268 30 VLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFG--RRKGFLITAIVTSAA 107 (514)
Q Consensus 30 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G--~r~~l~~~~~~~~~~ 107 (514)
.++...++..+...........+|.+.++++.+..+.+.+.++..+...++.+..|+++|+.. ++....+++++.+++
T Consensus 299 ~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~ 378 (509)
T KOG2504|consen 299 KFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLA 378 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHH
Confidence 455566677777788888888899999999999999999999999999999999999999988 455577788888888
Q ss_pred HHHHhhhhhHHHHHHHHHHHhhhccchhhHH-HHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccc-hHHHH
Q 010268 108 GLLSAFAPNYYLLLFFRCLVGLGLGGGPVLA-SWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLG-WRWLL 185 (514)
Q Consensus 108 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~-~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~g-w~~~f 185 (514)
.+.++++++++.++...++.|++.|...... ..+.|..+.++-..+.|+...+.+++.++||++++.+.+..| |...|
T Consensus 379 ~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f 458 (509)
T KOG2504|consen 379 RLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAF 458 (509)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeeh
Confidence 8899999999999999999999999985554 578899999999999999999999999999999999888776 99999
Q ss_pred HHhHHHHHHHHHHHHHcc
Q 010268 186 GLSAFPSSLLLLLYSVTP 203 (514)
Q Consensus 186 ~~~~~~~~i~~~~~~~~~ 203 (514)
+.+++..++..+.++..+
T Consensus 459 ~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 459 YFCGLCFLLSAVLLLILR 476 (509)
T ss_pred hhcChHHHHHHHHHHHhH
Confidence 999999998888777766
No 210
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.22 E-value=3.7e-10 Score=104.45 Aligned_cols=160 Identities=19% Similarity=0.184 Sum_probs=136.5
Q ss_pred HHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 010268 46 MLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRC 125 (514)
Q Consensus 46 ~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 125 (514)
..+......-..++|++..++.++.....+..+++++++|++.||+|.|+++.+++++..+.++...+...-..+.++-.
T Consensus 270 til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gl 349 (438)
T COG2270 270 TILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGL 349 (438)
T ss_pred HHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHH
Confidence 33444344445699999999999999999999999999999999999999999999998888887777776677777888
Q ss_pred HHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhccc-chHHHHHHhHHHHHHHHHHHHHcc
Q 010268 126 LVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRL-GWRWLLGLSAFPSSLLLLLYSVTP 203 (514)
Q Consensus 126 l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~-gw~~~f~~~~~~~~i~~~~~~~~~ 203 (514)
+.|+..|.. ..+-++..+..|+++-++.+|+++.....+..+||.+.+.+.+.. +-|..+....++..+.+++++.+|
T Consensus 350 l~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~ 429 (438)
T COG2270 350 LVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVK 429 (438)
T ss_pred HHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeec
Confidence 999999998 666799999999999999999999999999999999999887754 478888777777777777777776
Q ss_pred CC
Q 010268 204 ES 205 (514)
Q Consensus 204 ~~ 205 (514)
++
T Consensus 430 ~~ 431 (438)
T COG2270 430 VP 431 (438)
T ss_pred CC
Confidence 54
No 211
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.20 E-value=4.3e-11 Score=111.05 Aligned_cols=145 Identities=14% Similarity=0.083 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhh----hhCChHHHH-HHHHHH
Q 010268 30 VLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSD----NFGRRKGFL-ITAIVT 104 (514)
Q Consensus 30 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~D----r~G~r~~l~-~~~~~~ 104 (514)
.++.+....+...+.+..-..+.+.+.+++|++....+.+-....+...+.+|+.|..+| ||||||.++ .+.++.
T Consensus 33 ~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i 112 (498)
T KOG0637|consen 33 KLISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLI 112 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHH
Confidence 333344444444555555566677788899999999999999999999999999999999 589877655 556777
Q ss_pred HHHHHHHhhhhhHHH-----------------HHHHHHHHhhhccch-hhHHHHHHhhcCCCchhH-HHHHHHHHHHHHH
Q 010268 105 SAAGLLSAFAPNYYL-----------------LLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGF-WMVIFQTFWTVGT 165 (514)
Q Consensus 105 ~~~~~~~~~~~~~~~-----------------l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~G~ 165 (514)
.++.++..++.++.. +++.-.+.-++.-.. .++-+++.|...++++.+ +++++..+.++|.
T Consensus 113 ~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGn 192 (498)
T KOG0637|consen 113 AVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGN 192 (498)
T ss_pred HHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcc
Confidence 788888888765443 333333444444444 566689999997766666 9999999999999
Q ss_pred HHHHHHHHH
Q 010268 166 ILEAGIAWL 174 (514)
Q Consensus 166 ~~~~~i~~~ 174 (514)
.+|..++.+
T Consensus 193 vLGY~~g~y 201 (498)
T KOG0637|consen 193 VLGYALGSY 201 (498)
T ss_pred eeeeecccc
Confidence 998887764
No 212
>TIGR00898 2A0119 cation transport protein.
Probab=99.20 E-value=4.3e-10 Score=113.66 Aligned_cols=149 Identities=18% Similarity=0.097 Sum_probs=114.1
Q ss_pred HHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhH--HHHHHHHHHHhhh
Q 010268 53 PAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNY--YLLLFFRCLVGLG 130 (514)
Q Consensus 53 ~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~ 130 (514)
+...++++.+.. +......+...++.++.+++.||+|||+.+.++.++.+++.++..+.++. +..++..++.+++
T Consensus 347 ~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 423 (505)
T TIGR00898 347 VLDLGNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFG 423 (505)
T ss_pred hccccccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Confidence 334445555533 33344556677888999999999999999999999988888877776543 4444555566666
Q ss_pred ccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHHHHccCCh
Q 010268 131 LGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLLYSVTPESP 206 (514)
Q Consensus 131 ~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~ 206 (514)
.+.. +....+..|.+|++.|+.++|+.+....+|.+++|.+.+ + ...++...+.+.++..++..+..+++||+.
T Consensus 424 ~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~lpet~ 498 (505)
T TIGR00898 424 ITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLFLPETK 498 (505)
T ss_pred HHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHcCcCCC
Confidence 5555 666688899999999999999999999999999999988 4 345677888888888888877777888764
No 213
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.19 E-value=3.5e-08 Score=94.66 Aligned_cols=368 Identities=14% Similarity=0.037 Sum_probs=200.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCC-CcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHH
Q 010268 32 AYAGMGWISEAMEMMLLSFVGPAVQSLWHL-SPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLL 110 (514)
Q Consensus 32 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~ 110 (514)
..+..++++...+..++.+..|.+..+..- +---.+...-.-.+...++++..|.+.||..|.+++-.+.+..-++.++
T Consensus 5 ~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~ 84 (432)
T PF06963_consen 5 WRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAA 84 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHH
Confidence 455677788888888888888887777633 3333444455566677889999999999999998877766555433332
Q ss_pred Hh------hh--h-----h--HHHHHHHHHHHhhhccchhhHHH------HHHhhc--CCCchhHHHHHHHHHHHHHHHH
Q 010268 111 SA------FA--P-----N--YYLLLFFRCLVGLGLGGGPVLAS------WFLEFI--PAPNRGFWMVIFQTFWTVGTIL 167 (514)
Q Consensus 111 ~~------~~--~-----~--~~~l~~~r~l~G~~~g~~~~~~~------~i~~~~--~~~~r~~~~~~~~~~~~~G~~~ 167 (514)
.+ +. + + ...+++.-.+.|.-.-....+.. ++.... +++.+.+.++.+.-.=-+..++
T Consensus 85 s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckll 164 (432)
T PF06963_consen 85 SCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLL 164 (432)
T ss_pred HHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHH
Confidence 21 11 1 1 11122222222221111122221 222223 3445666677777777778999
Q ss_pred HHHHHHHHhcccchHHHHHHhHHHHHHHHHH-HHHcc----CChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCch
Q 010268 168 EAGIAWLVMPRLGWRWLLGLSAFPSSLLLLL-YSVTP----ESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDW 242 (514)
Q Consensus 168 ~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (514)
+|++.|.+.+..+.+....+.++..++..++ ++++. ..|.- ..+++.++
T Consensus 165 aPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L-~~~~~~~~------------------------- 218 (432)
T PF06963_consen 165 APLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPAL-AVKKRSSE------------------------- 218 (432)
T ss_pred HHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHh-cCCCCCcc-------------------------
Confidence 9999999999889988888877777777655 33331 11110 00000000
Q ss_pred hhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHH
Q 010268 243 EHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNA 322 (514)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 322 (514)
.+.+++....+..+.+....+... +..+.....|+..++.+.+..-+.+.+.++.
T Consensus 219 ------------~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~w~~Y~~q~vflas~alalLY~T-- 273 (432)
T PF06963_consen 219 ------------SESSSDEESSSESSSDPSILKRLW-----------NPLRTIIRGWRTYFRQPVFLASFALALLYFT-- 273 (432)
T ss_pred ------------ccccccccccccccchhhHHHHHH-----------HHHHHHhccHHHHHhCHHHHHHHHHHHHHHH--
Confidence 000000000000000000000000 0000111245555555444444443333332
Q ss_pred HHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHh----
Q 010268 323 FSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFL---- 398 (514)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~---- 398 (514)
..++...+..|... .|.++...+..-.+..+.++.|.++.+++.+|+|..+.-..+......++
T Consensus 274 --VLsf~~lmt~yl~~----------~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v 341 (432)
T PF06963_consen 274 --VLSFGGLMTAYLKS----------QGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCV 341 (432)
T ss_pred --HhcCcHHHHHHHHH----------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHH
Confidence 11122223333332 24787777888889999999999999999999998877666665443322
Q ss_pred hhhhcccCc-chhHHHHHHHHh-----hhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHH
Q 010268 399 VPLLFQQPK-GLTTGLLFGARI-----CITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLV 462 (514)
Q Consensus 399 ~~~~~~~~~-~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i 462 (514)
..++...++ .......++.|+ +.=++=.....+++|.+|+++||+..|+-+..+++...+.-.+
T Consensus 342 ~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 342 VSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred HHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 222222222 122222222232 2222334556788999999999999999999998877664443
No 214
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.19 E-value=8.7e-09 Score=98.56 Aligned_cols=105 Identities=19% Similarity=0.179 Sum_probs=88.2
Q ss_pred HHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HHHHHhhcCCC
Q 010268 70 TSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCLVGLGLGGGPVL-ASWFLEFIPAP 148 (514)
Q Consensus 70 ~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~ 148 (514)
.++......+++++.+.+.|+.|.|..+.++......-.+...+ +|-+.+++...+.|+|.+..... ..++++...++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 67777788899999999999999999999999988776666544 45677888999999999988544 48999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010268 149 NRGFWMVIFQTFWTVGTILEAGIAWLV 175 (514)
Q Consensus 149 ~r~~~~~~~~~~~~~G~~~~~~i~~~l 175 (514)
++.+..++.-+....+.++|..+...+
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~ 161 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIY 161 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheee
Confidence 999999999998888888887665443
No 215
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.18 E-value=4.8e-09 Score=98.60 Aligned_cols=327 Identities=19% Similarity=0.158 Sum_probs=180.8
Q ss_pred hHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhHH-HHHHhh
Q 010268 66 ESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCLVGLGLGGGPVLA-SWFLEF 144 (514)
Q Consensus 66 ~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~-~~i~~~ 144 (514)
.|.+.-+..+...+..+.+.+..+|+..+.=+.+...++.+|.++.+++++.+.-+++-++.+++.|..-+.. ++ +..
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~ 139 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THF 139 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHh
Confidence 3557777778888889999999999887666667777888999999999999998899999999988874433 44 445
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccc--hHHHHHHhHHHHHHHHHHHH-HccCChhhhhccCCchHHHHH
Q 010268 145 IPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLG--WRWLLGLSAFPSSLLLLLYS-VTPESPRYLCLKGRTAEARHV 221 (514)
Q Consensus 145 ~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~g--w~~~f~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 221 (514)
+++ ...+-+..+.+.++++|+..-..+.+ .| .|..+++...+.++.++.++ .+|.++.. ...++.+.
T Consensus 140 y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~-~~~~~~~~---- 209 (402)
T PF02487_consen 140 YGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTN-RPYQESES---- 209 (402)
T ss_pred cCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhcccccc-CCCcccCC----
Confidence 543 35677888888899999887666655 44 47788777766665555544 44432210 00000000
Q ss_pred HHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccchhhHHHH
Q 010268 222 LEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMGGITALLI 301 (514)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (514)
.++.+++....+..+++++ . . ........++.
T Consensus 210 --------------------------------~~~~~~~~~~~~~~~~~~~-------~--~-------~~~~~~~k~~~ 241 (402)
T PF02487_consen 210 --------------------------------EDEAEDDLLESETSESKPD-------S--S-------SKLSFKEKLKR 241 (402)
T ss_pred --------------------------------CCccccccccccccccccc-------c--c-------chhhHHHHHHH
Confidence 0000000000000000000 0 0 00000001111
Q ss_pred hhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHH
Q 010268 302 LLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRL 381 (514)
Q Consensus 302 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~ 381 (514)
+ ++..+..+-+.+.+++..+...++ .+.+.-.. ......+...+....+.++..++|--...+ |+
T Consensus 242 ~--k~Ll~ymiPL~lVY~aEY~InqGv---~~tl~fp~--------~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri 306 (402)
T PF02487_consen 242 L--KPLLWYMIPLFLVYFAEYFINQGV---APTLLFPN--------SFFSPRDQYRWYQLLYQLGVFISRSSLPFF--RI 306 (402)
T ss_pred H--HHHHHHHHHHHHHHHHHHHHHhch---HHHhcCCc--------cCCCHHHHHHHHHHHHHHHHhhhhcceeee--eh
Confidence 1 111112222223333322222222 22221000 000112222455556666655555332221 33
Q ss_pred hhHHHHHHHHHHHHHHhhh---hhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhH
Q 010268 382 GRKLSMSSMFFCCCIFLVP---LLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMV 458 (514)
Q Consensus 382 g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 458 (514)
.+.+.+.+...+..+.++. +-+.++.|...+.++.-|+..|..+...+..+.|..|+++|-.++|.......+|..+
T Consensus 307 r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~l 386 (402)
T PF02487_consen 307 RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILL 386 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHH
Confidence 3333332222222222211 2245567777788888999999999888888888899999999999999888888877
Q ss_pred HHHHHHHH
Q 010268 459 CPLVAVAL 466 (514)
Q Consensus 459 ~p~i~g~l 466 (514)
+..++-.+
T Consensus 387 Agll~l~l 394 (402)
T PF02487_consen 387 AGLLGLPL 394 (402)
T ss_pred HHHHHHHH
Confidence 77765443
No 216
>PRK10133 L-fucose transporter; Provisional
Probab=99.16 E-value=7.2e-10 Score=109.16 Aligned_cols=151 Identities=15% Similarity=0.044 Sum_probs=123.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHH
Q 010268 307 LIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLS 386 (514)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~ 386 (514)
....+..+...++...+.........|.+.++.+ .+..+.++..+.+.++..++.++.|++.||+|||++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~----------~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~ 93 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFT----------LTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAG 93 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 3455566666677777777777788888865544 777788999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhh---hcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHH
Q 010268 387 MSSMFFCCCIFLVPL---LFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVA 463 (514)
Q Consensus 387 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~ 463 (514)
+..+..+.+++.+.+ ...++.+.+.+..++.|++.+...+....++.+..|++.+...+++.+....+|..++|.++
T Consensus 94 l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g 173 (438)
T PRK10133 94 IITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFG 173 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988887664 24566777777888999999999888888888877766666789999999999999999998
Q ss_pred HHHH
Q 010268 464 VALV 467 (514)
Q Consensus 464 g~l~ 467 (514)
+.+.
T Consensus 174 ~~l~ 177 (438)
T PRK10133 174 QSLI 177 (438)
T ss_pred HHHH
Confidence 7654
No 217
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.16 E-value=1.6e-09 Score=93.13 Aligned_cols=315 Identities=16% Similarity=0.120 Sum_probs=178.3
Q ss_pred HHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 010268 46 MLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRC 125 (514)
Q Consensus 46 ~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 125 (514)
-.-+|....+.+++|.-..++|.+.-.......++..+.|-++|+-|||+.-+.-++...+++ +.-.++++..++++|+
T Consensus 54 WLQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~ 132 (454)
T KOG4332|consen 54 WLQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRV 132 (454)
T ss_pred hhcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehhh
Confidence 345666777788999999999999988888889999999999999999997554444333322 2345788999999999
Q ss_pred HHhhhccch-hhHHHH-HHhhcCCCchhHHHHHHH--------HHHHHHHHHHHHHHHHHhccc--chHHHHHHhHHHHH
Q 010268 126 LVGLGLGGG-PVLASW-FLEFIPAPNRGFWMVIFQ--------TFWTVGTILEAGIAWLVMPRL--GWRWLLGLSAFPSS 193 (514)
Q Consensus 126 l~G~~~g~~-~~~~~~-i~~~~~~~~r~~~~~~~~--------~~~~~G~~~~~~i~~~l~~~~--gw~~~f~~~~~~~~ 193 (514)
+-|++.+.. ..--++ +.|... +|+.---+.. .+..+-.+++.+.+..+.+.+ |.-.+|-..+....
T Consensus 133 LGGiaTsLLFSaFEsWliaEHne--kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLa 210 (454)
T KOG4332|consen 133 LGGIATSLLFSAFESWLIAEHNE--KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLA 210 (454)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhh--ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHH
Confidence 999999887 444454 556542 3332111111 122222333444444455543 44556655444444
Q ss_pred HHHHHHHHccCChhhhhccCCchHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCch
Q 010268 194 LLLLLYSVTPESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSI 273 (514)
Q Consensus 194 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (514)
+...+.+. .|...-+++.+.+..+.+.+.
T Consensus 211 igmAvil~-----~W~ENygdps~~kdlltqf~g---------------------------------------------- 239 (454)
T KOG4332|consen 211 IGMAVILS-----SWSENYGDPSENKDLLTQFKG---------------------------------------------- 239 (454)
T ss_pred HHHHHHHh-----hhhhccCChhhhHHHHHHhhH----------------------------------------------
Confidence 43222111 122223444433333333221
Q ss_pred hHhhhhccCCccccccccccchhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcc
Q 010268 274 SEAKEMKSEDSTSTLANSNMGGITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSR 353 (514)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (514)
..+.+.+.+ +..++..+-..+-...|..+..|.|.+.. .+.
T Consensus 240 ------------------------aa~aiaSD~--ki~LLG~iqsLFE~smytFVFLWTPaLsp-------------n~e 280 (454)
T KOG4332|consen 240 ------------------------AARAIASDE--KIALLGAIQSLFEGSMYTFVFLWTPALSP-------------NDE 280 (454)
T ss_pred ------------------------hHHHHhcch--HHHHHHHHHHHHhhhhheeeeeecccCCC-------------Ccc
Confidence 111112111 22233333333444444455567776541 111
Q ss_pred cCc-ccchhhhhhchhhHHHHHHHHHHHHhhH--HHHHHHHHHHHHHhhhhhc----cc---CcchhHHHHHHHHhhhcc
Q 010268 354 DIN-YGDVFITSFAEFPGLLLAAAMVDRLGRK--LSMSSMFFCCCIFLVPLLF----QQ---PKGLTTGLLFGARICITV 423 (514)
Q Consensus 354 ~~~-~~~~~~~~~~~~~g~~~~g~l~dr~g~~--~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~g~~~~~ 423 (514)
+.. +..+..+.++.++|+-+..++..|-..| ..+.+.+.+.+..+.+... .+ ++....+...++-.+.|.
T Consensus 281 ~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGl 360 (454)
T KOG4332|consen 281 EIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGL 360 (454)
T ss_pred cCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhh
Confidence 122 6777777788888887777776654333 3334444444333332221 11 223334455556678889
Q ss_pred cccceeeccccccCcchhhHHHHHHHHHHH
Q 010268 424 TFTVVYVYAPEIYPTSVRTTGVGVASSIGR 453 (514)
Q Consensus 424 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 453 (514)
.+|.+.-+-.+..|.+.|++.+-+...--+
T Consensus 361 fwPSimkmRsqyIPEearstimNfFRvPLn 390 (454)
T KOG4332|consen 361 FWPSIMKMRSQYIPEEARSTIMNFFRVPLN 390 (454)
T ss_pred cchHHHHHHHhhCCHHHHhhhhhheechhh
Confidence 999999999999999999887765544333
No 218
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.15 E-value=5.2e-10 Score=114.51 Aligned_cols=143 Identities=13% Similarity=0.010 Sum_probs=116.6
Q ss_pred CcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhccc-------------------------
Q 010268 351 KSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQ------------------------- 405 (514)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~------------------------- 405 (514)
.+..+.+++.+.+.++..++.++.+++.||.+||+.+.++.++.+++.+++...+
T Consensus 65 lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~ 144 (633)
T TIGR00805 65 LSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFL 144 (633)
T ss_pred CCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccccccccccccc
Confidence 7888889999999999999999999999999999999988888888776655321
Q ss_pred --------------------------CcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHH
Q 010268 406 --------------------------PKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVC 459 (514)
Q Consensus 406 --------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~ 459 (514)
....+++.-++.|++.+..++...+++.|.+|++.|+...|+......+|..+|
T Consensus 145 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG 224 (633)
T TIGR00805 145 CMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFG 224 (633)
T ss_pred ccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHH
Confidence 122345677889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhc----------------------CchhHHHHHHHHHHHHHHHhhcc
Q 010268 460 PLVAVALVHGC----------------------HQTAALILFELVILLSGISVLLF 493 (514)
Q Consensus 460 p~i~g~l~~~~----------------------g~~~~~~~~~~~~~~~~~~~~~~ 493 (514)
+.++|.+.+.. +|+..|++.+++.++.++..+++
T Consensus 225 ~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~ 280 (633)
T TIGR00805 225 YLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFF 280 (633)
T ss_pred HHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999988643 14455666666666655544444
No 219
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.13 E-value=4.2e-09 Score=101.48 Aligned_cols=166 Identities=13% Similarity=0.087 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhcC-CCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhh-hh
Q 010268 39 ISEAMEMMLLSFVGPAVQSLWH-LSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFA-PN 116 (514)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~-~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~-~~ 116 (514)
++.......+....+.+.++.| .+....|.+.++..++=.+.-...+++..|+|.|++++++.+..++=..+.+.. ++
T Consensus 217 ~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~ 296 (400)
T PF03825_consen 217 FLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDP 296 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4444445555556667778887 778888888888888888899999999999999999999999999988888877 44
Q ss_pred HHHHH----HHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHH-HHHHHHHHHHHHHHHhcccchH------HH
Q 010268 117 YYLLL----FFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTF-WTVGTILEAGIAWLVMPRLGWR------WL 184 (514)
Q Consensus 117 ~~~l~----~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~G~~~~~~i~~~l~~~~gw~------~~ 184 (514)
.+... +...+.|+..+.. .+...++.+..|++.|+++.+++.+. .++|..+|..++|++.+++|-+ ..
T Consensus 297 ~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~ 376 (400)
T PF03825_consen 297 WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAV 376 (400)
T ss_pred cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHH
Confidence 44333 3345799999988 67778999999999999999998764 6899999999999999877644 45
Q ss_pred HHHhHHHHHHHHHH-HHHccC
Q 010268 185 LGLSAFPSSLLLLL-YSVTPE 204 (514)
Q Consensus 185 f~~~~~~~~i~~~~-~~~~~~ 204 (514)
+.+.+...++..++ +++.+|
T Consensus 377 ~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 377 FLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHHHHHHHHHHHhhccC
Confidence 55555555554444 333443
No 220
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.13 E-value=2.8e-09 Score=118.88 Aligned_cols=142 Identities=18% Similarity=0.094 Sum_probs=119.7
Q ss_pred HHhhhhcCCCcc-hhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhc
Q 010268 53 PAVQSLWHLSPN-QESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCLVGLGL 131 (514)
Q Consensus 53 ~~~~~~~~~s~~-~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 131 (514)
+.+.+.+|.+.. +.|++.+...++..++++++|++.||+++|+.+.++.++.+++.++..+..+.+.+++..++.|++.
T Consensus 257 ~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 336 (1146)
T PRK08633 257 AYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSA 336 (1146)
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 445567899999 9999999999999999999999999999999999998888888888888888888888899999998
Q ss_pred cch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc-ccchHHHHHHhHHHHHH
Q 010268 132 GGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMP-RLGWRWLLGLSAFPSSL 194 (514)
Q Consensus 132 g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~-~~gw~~~f~~~~~~~~i 194 (514)
+.. +...+++.+..|++.||+++++.+....+|.++++.+++.+.. .+++...|++.+.+.++
T Consensus 337 ~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 337 GLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 887 6666888999999999999999999999999888888776654 24566666655554433
No 221
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.13 E-value=2.7e-09 Score=102.55 Aligned_cols=135 Identities=16% Similarity=0.057 Sum_probs=106.5
Q ss_pred HHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhh-CChHHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Q 010268 45 MMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNF-GRRKGFLITAIVTSAAGLLSAFAPNYYLLLFF 123 (514)
Q Consensus 45 ~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~-G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 123 (514)
........|.+.++.|.|..+.+.+.+...++..+++++.|++.||+ +||+.+..+..+.+++.+++.+.++..... .
T Consensus 213 ~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 291 (355)
T TIGR00896 213 YYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-W 291 (355)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-H
Confidence 33444566777788899999999999999999999999999999999 566677777787888777776665433322 4
Q ss_pred HHHHhhhccch-hhHHHHHHhhcC-CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 010268 124 RCLVGLGLGGG-PVLASWFLEFIP-APNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLG 180 (514)
Q Consensus 124 r~l~G~~~g~~-~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~g 180 (514)
.++.|++.+.. +...+.+.+..+ +++++...++.+....+|..++|.+.+.+.++.|
T Consensus 292 ~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 292 ALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 56789998887 665666655544 5667899999999999999999999999988665
No 222
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.12 E-value=1.3e-09 Score=94.68 Aligned_cols=148 Identities=16% Similarity=0.061 Sum_probs=114.0
Q ss_pred HhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHH-HHHHHHHHHhhhhhHHHHHHHHHHHhhhcc
Q 010268 54 AVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAI-VTSAAGLLSAFAPNYYLLLFFRCLVGLGLG 132 (514)
Q Consensus 54 ~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 132 (514)
...+.+|+|+...+-+.+....-.++.+++.|.++||+|++...+.+.. ...++-.+..| +++.-+....+.|++..
T Consensus 290 fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsys 367 (459)
T KOG4686|consen 290 FFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYS 367 (459)
T ss_pred HHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHH
Confidence 4678899999999999999999999999999999999999987666544 34444444444 23444567788899888
Q ss_pred ch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccc---hHHHH-HHhHHHHHHHHHHHHHcc
Q 010268 133 GG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLG---WRWLL-GLSAFPSSLLLLLYSVTP 203 (514)
Q Consensus 133 ~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~g---w~~~f-~~~~~~~~i~~~~~~~~~ 203 (514)
.. ....+.++...|+++.|++.|..+...++|..+.|++++++.+.-| |--+| +..+.+++....+++.+.
T Consensus 368 llAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N 443 (459)
T KOG4686|consen 368 LLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLN 443 (459)
T ss_pred HHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhee
Confidence 77 4466889999999999999999999999999999999999988544 44444 445555555555554443
No 223
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.11 E-value=1.3e-09 Score=103.82 Aligned_cols=124 Identities=8% Similarity=0.020 Sum_probs=112.8
Q ss_pred CCcccC-cccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccce
Q 010268 350 GKSRDI-NYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVV 428 (514)
Q Consensus 350 ~~~~~~-~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 428 (514)
+.+.++ .+.....+..+..+..+++|+++||+|.|+++..+.+...+..++..+..+...+.+.-++.|++.+..+ ..
T Consensus 57 glT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~ 135 (511)
T TIGR00806 57 NFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI-AY 135 (511)
T ss_pred CCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 388888 7999999999999999999999999999999999999999999888888788888888999999999998 89
Q ss_pred eeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhH
Q 010268 429 YVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAA 475 (514)
Q Consensus 429 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~ 475 (514)
..++.+.+|+++|+++.|+.+....+|.++++++.+. ...+||...
T Consensus 136 ~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y 181 (511)
T TIGR00806 136 SSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISY 181 (511)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhH
Confidence 9999999999999999999999999999999999999 555676543
No 224
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.11 E-value=2.4e-10 Score=103.55 Aligned_cols=120 Identities=15% Similarity=0.079 Sum_probs=101.5
Q ss_pred cccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHH-HHHHHhhhcccccceee
Q 010268 352 SRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGL-LFGARICITVTFTVVYV 430 (514)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~ 430 (514)
+...+++..+.+++...+.++..|.++||+|||.++.+|.+..++..+.+....+. ..++. =++.|+.. +...+..+
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F-~afv~aR~l~Gi~k-gnl~v~rA 143 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNF-AAFVLARFLGGIFK-GNLSVIRA 143 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhcc-CchHHHHH
Confidence 44556888899999999999999999999999999999999999988888887777 33333 45555554 44578889
Q ss_pred ccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHh---hcCch
Q 010268 431 YAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVH---GCHQT 473 (514)
Q Consensus 431 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~---~~g~~ 473 (514)
+++|++++++|+.+++.++...++|-++||.++|++.+ ..|.+
T Consensus 144 iisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~ 189 (451)
T KOG2615|consen 144 IISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSY 189 (451)
T ss_pred HHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccC
Confidence 99999999999999999999999999999999999987 44544
No 225
>PRK09848 glucuronide transporter; Provisional
Probab=99.10 E-value=1.1e-08 Score=101.58 Aligned_cols=135 Identities=15% Similarity=0.149 Sum_probs=103.7
Q ss_pred HHHHHHHHhhh-hcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhh--hHHHHHHH
Q 010268 47 LLSFVGPAVQS-LWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAP--NYYLLLFF 123 (514)
Q Consensus 47 ~~~~~~~~~~~-~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~ 123 (514)
......|.+.+ .+|.+....++......++..++.++++++.||+|+|+.+.++.++.+++.++..+.+ +++.+++.
T Consensus 246 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 325 (448)
T PRK09848 246 AVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVA 325 (448)
T ss_pred HHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHH
Confidence 34444555544 4676665555555555677888999999999999999999999988888887776654 56777777
Q ss_pred HHHHhhhccch-hhHHHHHHhhcCCC-------chhHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 010268 124 RCLVGLGLGGG-PVLASWFLEFIPAP-------NRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGW 181 (514)
Q Consensus 124 r~l~G~~~g~~-~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw 181 (514)
.++.|+|.+.. +...++..|..+.+ ++|...|+++....+|..+++.+.+.+.+..|+
T Consensus 326 ~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 326 LAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88899998887 66667777776543 469999999999999999999999887765544
No 226
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.09 E-value=1.7e-07 Score=95.40 Aligned_cols=153 Identities=17% Similarity=0.196 Sum_probs=124.6
Q ss_pred HHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhh-hCChHHHHHHHHHHHHHHHHHhhhhh--------HHH
Q 010268 49 SFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDN-FGRRKGFLITAIVTSAAGLLSAFAPN--------YYL 119 (514)
Q Consensus 49 ~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr-~G~r~~l~~~~~~~~~~~~~~~~~~~--------~~~ 119 (514)
..+..++.+.+|.+.+....+...+.....+..+++|.++|+ +|+++.++++.++..+|.++.++... ...
T Consensus 8 aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~ 87 (654)
T TIGR00926 8 TILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLL 87 (654)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHH
Confidence 344455666789999999999999999999999999999996 69999999999999999988876421 234
Q ss_pred HHHHHHHHhhhccch-hhHHHHHHhhcCCC---chhHHHHHHHHHHHHHHHHHHHHHHHHhcc-------cchHHHHHHh
Q 010268 120 LLFFRCLVGLGLGGG-PVLASWFLEFIPAP---NRGFWMVIFQTFWTVGTILEAGIAWLVMPR-------LGWRWLLGLS 188 (514)
Q Consensus 120 l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~-------~gw~~~f~~~ 188 (514)
.+++..+..+|.|.. +...+...|.++++ +|...+.++..+.++|+++++.+..++.+. .+|...|.+.
T Consensus 88 ~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~ 167 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVP 167 (654)
T ss_pred HHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHH
Confidence 566777888899988 88889999988754 367788899999999999999998888643 3699999999
Q ss_pred HHHHHHHHHHHHH
Q 010268 189 AFPSSLLLLLYSV 201 (514)
Q Consensus 189 ~~~~~i~~~~~~~ 201 (514)
++..++.+++...
T Consensus 168 ~i~m~ia~lvf~~ 180 (654)
T TIGR00926 168 AILMILALIVFMA 180 (654)
T ss_pred HHHHHHHHHHHHH
Confidence 8888877666443
No 227
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.09 E-value=2.8e-09 Score=102.53 Aligned_cols=117 Identities=13% Similarity=0.154 Sum_probs=95.3
Q ss_pred HHHHHHHHHhhhhcCCCcchhHHHHHHHH-HHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhh----------
Q 010268 46 MLLSFVGPAVQSLWHLSPNQESLITSVVF-AGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFA---------- 114 (514)
Q Consensus 46 ~~~~~~~~~~~~~~~~s~~~~g~i~s~~~-~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~---------- 114 (514)
.......|.+.+++|.+..+.|.+.++.. ++..++.+++|++.||+|+|+.+.++.++.+++..+..+.
T Consensus 226 ~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (356)
T TIGR00901 226 SAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGIT 305 (356)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccc
Confidence 34444556666669999999999888766 5778999999999999999999998888887776655543
Q ss_pred -hhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHH
Q 010268 115 -PNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWT 162 (514)
Q Consensus 115 -~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 162 (514)
++.+.+....++.+++.+.. +...+++.|.+|+++||+.+|+.+...+
T Consensus 306 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 306 FPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 34577777888999998887 7777999999999999999999887654
No 228
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.07 E-value=4.5e-09 Score=116.86 Aligned_cols=147 Identities=16% Similarity=0.073 Sum_probs=116.5
Q ss_pred HHHHHHHhh-hhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhh------------
Q 010268 48 LSFVGPAVQ-SLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFA------------ 114 (514)
Q Consensus 48 ~~~~~~~~~-~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~------------ 114 (514)
+....|.+. +.+|.++.+.|++.+.+.++..+++++.|++.|+.++++.+..+.++.+++.+.+.+.
T Consensus 244 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 323 (1140)
T PRK06814 244 VLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLK 323 (1140)
T ss_pred HHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhccccccccccccc
Confidence 333455554 5589999999999999999999999999999998887777666666555555444432
Q ss_pred --------hhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc-ccchHHH
Q 010268 115 --------PNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMP-RLGWRWL 184 (514)
Q Consensus 115 --------~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~-~~gw~~~ 184 (514)
++.+.+++..++.|++.+.. +...+++.+.+|+++||+++|..+....+|..+++++.+.+.+ ..++...
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~ 403 (1140)
T PRK06814 324 SILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWI 403 (1140)
T ss_pred chhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHH
Confidence 66777888889999998887 6667899999999999999999999999999999999888863 4567777
Q ss_pred HHHhHHHHHH
Q 010268 185 LGLSAFPSSL 194 (514)
Q Consensus 185 f~~~~~~~~i 194 (514)
+++.++..++
T Consensus 404 ~~~~~~~~~~ 413 (1140)
T PRK06814 404 ILFIALANLI 413 (1140)
T ss_pred HHHHHHHHHH
Confidence 6665554333
No 229
>PTZ00207 hypothetical protein; Provisional
Probab=99.07 E-value=1.6e-09 Score=108.14 Aligned_cols=161 Identities=14% Similarity=0.068 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhh
Q 010268 322 AFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPL 401 (514)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 401 (514)
....|.+..+.+.+.++.+ .+..+.+....+.. ......++.|++.||+|+|+++.++.++..++.++.
T Consensus 40 ~g~~y~fsv~s~~L~~~lg----------ls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ 108 (591)
T PTZ00207 40 TSFMYAFNLISGAMQARYN----------LTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLF 108 (591)
T ss_pred HHHHHHHHHHHHHHHHHhC----------cCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 3444566677777765444 66655555544432 223456678999999999999999999999988877
Q ss_pred hcc------cCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhH
Q 010268 402 LFQ------QPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAA 475 (514)
Q Consensus 402 ~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~ 475 (514)
++. .+.+.+.+..++.|++.+..++.....+.+.+| ++||++.|+......+|+++.+.+...+.. .++...
T Consensus 109 ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~ 186 (591)
T PTZ00207 109 ALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAY 186 (591)
T ss_pred HHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHH
Confidence 764 455666667777888877777777777888887 789999999999999999864444444443 245566
Q ss_pred HHHHHHHHHHHHHHhhcccc
Q 010268 476 LILFELVILLSGISVLLFPF 495 (514)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~ 495 (514)
+++.+++.++..++.+.+.+
T Consensus 187 fl~l~vl~~vv~ll~~~~vr 206 (591)
T PTZ00207 187 FFFLMSFALVVGILAIVFMR 206 (591)
T ss_pred HHHHHHHHHHHHHHHHhhee
Confidence 66677766666655555443
No 230
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.06 E-value=2.2e-09 Score=106.41 Aligned_cols=138 Identities=13% Similarity=0.020 Sum_probs=111.4
Q ss_pred cCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccc
Q 010268 354 DINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAP 433 (514)
Q Consensus 354 ~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 433 (514)
+...++.....++..++.++.|+++|.+|||..++.+.++..++.+.....++....+....+.|++.+... .....++
T Consensus 78 ~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~is 156 (599)
T PF06609_consen 78 DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALAIS 156 (599)
T ss_pred ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHHHH
Confidence 444667777888899999999999999999999999999999999999988888888888888888865544 4455689
Q ss_pred cccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhc
Q 010268 434 EIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLL 492 (514)
Q Consensus 434 ~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 492 (514)
|..|.+.|....++.....-.....+|.+...+..+.+|.+.+++..+...++.+..++
T Consensus 157 El~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~ 215 (599)
T PF06609_consen 157 ELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFF 215 (599)
T ss_pred HhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHH
Confidence 99999999888887776655666678888777776778999888888777666655443
No 231
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.05 E-value=6.7e-10 Score=108.33 Aligned_cols=150 Identities=14% Similarity=0.058 Sum_probs=131.8
Q ss_pred cCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcc--cCcchhHHHHHHHHhhhcccc
Q 010268 348 QSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQ--QPKGLTTGLLFGARICITVTF 425 (514)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~ 425 (514)
+...+.++.+++.+....+.+++.+.+|++.||+|.|+++..+.++.++..++.... .+.+.+.+.-++.|++.+..+
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~ 146 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLF 146 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHH
Confidence 345677777889999999999999999999999999999999999998887776643 344566778899999999999
Q ss_pred cceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhh-cCchhHHHHHHHHHHHHHHHhhcccccc
Q 010268 426 TVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHG-CHQTAALILFELVILLSGISVLLFPFET 497 (514)
Q Consensus 426 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (514)
|....+..+-.|+++|++..++.....++|.+++-.+.|.+.+. .||...|++.+++.++..++.+++..+.
T Consensus 147 pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~ 219 (466)
T KOG2532|consen 147 PAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDS 219 (466)
T ss_pred hhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999998 9999999999999888777766655433
No 232
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.02 E-value=2.6e-08 Score=99.45 Aligned_cols=139 Identities=11% Similarity=0.003 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhh-----hhhH
Q 010268 43 MEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAF-----APNY 117 (514)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~-----~~~~ 117 (514)
..........+++.+...-+....+++.+...++..++.+++++++||+|+|+.+.++..+.+++.+...+ .++.
T Consensus 245 ~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (473)
T PRK10429 245 IASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNA 324 (473)
T ss_pred HHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhH
Confidence 33344444555665555446667778888777889999999999999999999999888776666555432 3456
Q ss_pred HHHHHHHHHHhhhccch-hhHHHHHHhhcC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 010268 118 YLLLFFRCLVGLGLGGG-PVLASWFLEFIP-------APNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGW 181 (514)
Q Consensus 118 ~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw 181 (514)
+.+++.-++.|++.+.. ....+++.|..+ +++.|..++......-+|..+++.+.+++.+..|+
T Consensus 325 ~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 325 LLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 66777778888888877 556678887754 34456788999999999999999999988765554
No 233
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.02 E-value=3.6e-09 Score=103.30 Aligned_cols=179 Identities=10% Similarity=-0.009 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHH----HHhhHH
Q 010268 310 STLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVD----RLGRKL 385 (514)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~d----r~g~~~ 385 (514)
.++.+....++..+.+.....+.+.+.+..+ .+....+....+..+.+++..++.|+++| |+|||+
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl~~lg----------~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRr 74 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYVQELG----------IPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRR 74 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC----------CCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChH
Confidence 3444455555555555555555555654444 77777788888999999999999999999 599999
Q ss_pred HHHHH-HHHHHHHhhhhhcccCc-----------------chhHHHHHHHHhhhcccccceeeccccccCcchh--hHHH
Q 010268 386 SMSSM-FFCCCIFLVPLLFQQPK-----------------GLTTGLLFGARICITVTFTVVYVYAPEIYPTSVR--TTGV 445 (514)
Q Consensus 386 ~~~~~-~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~--~~~~ 445 (514)
..+.. ....+++++++.+..+. +...+...+..++.....+...+++.|.+|+++| +.+.
T Consensus 75 p~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~ 154 (477)
T TIGR01301 75 PFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIAN 154 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHH
Confidence 87764 55555555555543321 1122223344456666777888999999998765 6799
Q ss_pred HHHHHHHHHhHhHHHHHHHHH--Hhhc-------------CchhHHHHHHHHHHHHHHHhhccccccc
Q 010268 446 GVASSIGRIGGMVCPLVAVAL--VHGC-------------HQTAALILFELVILLSGISVLLFPFETT 498 (514)
Q Consensus 446 g~~~~~~~~g~~~~p~i~g~l--~~~~-------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (514)
++.+.+..+|+.+++.+++.. .+.+ +....|.+.+++.+++.++..+..+|..
T Consensus 155 ~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 155 AYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 999999999999999998865 2222 2345677777777777777777777754
No 234
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.01 E-value=2.3e-09 Score=101.61 Aligned_cols=185 Identities=16% Similarity=0.108 Sum_probs=144.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHH-hhHHHH
Q 010268 309 KSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRL-GRKLSM 387 (514)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~ 387 (514)
|.++.++..-+.--++||+....+..|....- .+ ..+++++.+...+..++...-+..+++||++||+ |+|+.+
T Consensus 21 r~l~~if~vE~WERFsyYGmraiL~~Yl~~~~---~~--gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI 95 (498)
T COG3104 21 RGLYLIFFVELWERFSYYGMRAILILYLYYQL---GD--GLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTI 95 (498)
T ss_pred chHHHHHHHHHHHHHhhhhhHHHHHHHHHHhc---cc--cCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 45555666666677888887766665553221 00 1347777776667777777777888999999995 999999
Q ss_pred HHHHHHHHHHhhhhhccc--CcchhHHHHHHHHhhhcccccceeeccccccCcch--hhHHHHHHHHHHHHhHhHHHHHH
Q 010268 388 SSMFFCCCIFLVPLLFQQ--PKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSV--RTTGVGVASSIGRIGGMVCPLVA 463 (514)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~--~~~~~g~~~~~~~~g~~~~p~i~ 463 (514)
.++.++..++.+.+.... ....+++.+.+.+++.|..=+...+++.|.+|++. |-..+++..+..++|+.++|.+.
T Consensus 96 ~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~ 175 (498)
T COG3104 96 VLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIIT 175 (498)
T ss_pred HHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHH
Confidence 999999999998888763 56677888888889999999999999999998643 77888888899999999999999
Q ss_pred HHHHhhcCchhHHHHHHHHHHHHHHHhhccccccc
Q 010268 464 VALVHGCHQTAALILFELVILLSGISVLLFPFETT 498 (514)
Q Consensus 464 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (514)
+++.+..|+...|...++-..++.+..+...+..+
T Consensus 176 ~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~ 210 (498)
T COG3104 176 GLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVK 210 (498)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhc
Confidence 99999999988888888777777776665544333
No 235
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.99 E-value=1.1e-08 Score=101.03 Aligned_cols=145 Identities=21% Similarity=0.364 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhh-
Q 010268 37 GWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAP- 115 (514)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~- 115 (514)
..++............+++.++.--++...+.+..+..++..++.+++++++||+|+|+.+..+..+.+++.++..+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~ 312 (428)
T PF13347_consen 233 AFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGP 312 (428)
T ss_pred HHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHh
Confidence 3444445555555555666555433336788888999999999999999999999999999999999999999988886
Q ss_pred -hHHHHHHHHHHHhhhccch-hhHHHHHHhhcC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 010268 116 -NYYLLLFFRCLVGLGLGGG-PVLASWFLEFIP-------APNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGW 181 (514)
Q Consensus 116 -~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw 181 (514)
+.+.+++..++.|++.+.. ....++++|..+ +++.|...+.+.....+|..+++.+.+.+.+..|+
T Consensus 313 ~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 313 GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 8999999999999999988 566678777665 34568999999999999999999998887664443
No 236
>PRK09669 putative symporter YagG; Provisional
Probab=98.99 E-value=6.9e-08 Score=95.78 Aligned_cols=131 Identities=15% Similarity=0.156 Sum_probs=95.6
Q ss_pred HHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhh--hhhHHHHHHHHHHHh
Q 010268 51 VGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAF--APNYYLLLFFRCLVG 128 (514)
Q Consensus 51 ~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G 128 (514)
..+++.++.--++...+.+.....+...++.+++++++||+|+|+.+..+.++.++..+...+ .++.+.+++..++.|
T Consensus 251 ~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g 330 (444)
T PRK09669 251 ATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFN 330 (444)
T ss_pred hhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHH
Confidence 334444433223334455666677788889999999999999999998887766544433222 346777788888999
Q ss_pred hhccch-hhHHHHHHhhcC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 010268 129 LGLGGG-PVLASWFLEFIP-------APNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGW 181 (514)
Q Consensus 129 ~~~g~~-~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw 181 (514)
++.+.. +...++++|..+ ++..|...+.......+|..+|+.+++.+.+..|+
T Consensus 331 ~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 331 FIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999887 666788887764 23456778899999999999999999998876655
No 237
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.98 E-value=4.1e-06 Score=81.58 Aligned_cols=143 Identities=10% Similarity=0.023 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC-----CcchhHHHHHHHHHHHHHh-hhhHHhhhhhhCChHHHHHHHHH
Q 010268 30 VLAYAGMGWISEAMEMMLLSFVGPAVQSLWHL-----SPNQESLITSVVFAGMLVG-AYSWGIVSDNFGRRKGFLITAIV 103 (514)
Q Consensus 30 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----s~~~~g~i~s~~~~~~~i~-~~~~G~l~Dr~G~r~~l~~~~~~ 103 (514)
.++.+.+.+|+..+..... -.+.+.+.. ..+.+.++-+...+..++. .++.+++++|++|++.+-+....
T Consensus 8 k~~~~~l~fF~il~~Y~iL----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~ 83 (472)
T TIGR00769 8 KFLPLFLMFFCILFNYTIL----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISP 83 (472)
T ss_pred HHHHHHHHHHHHHHHHHHH----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHH
Confidence 3344444445554444433 334455544 3467888888887777766 89999999999999998877666
Q ss_pred HHHHHHHHhhh----hh---------------------------HHHHHHHHHHHhhhccch-h-hHHHHHHhhcCCCch
Q 010268 104 TSAAGLLSAFA----PN---------------------------YYLLLFFRCLVGLGLGGG-P-VLASWFLEFIPAPNR 150 (514)
Q Consensus 104 ~~~~~~~~~~~----~~---------------------------~~~l~~~r~l~G~~~g~~-~-~~~~~i~~~~~~~~r 150 (514)
+....+++++. ++ .|...+..+...+-.... + .-.++..|.+..++-
T Consensus 84 F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qa 163 (472)
T TIGR00769 84 FLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEA 163 (472)
T ss_pred HHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 66665555543 11 222333334444433333 4 334788999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010268 151 GFWMVIFQTFWTVGTILEAGIAWLVM 176 (514)
Q Consensus 151 ~~~~~~~~~~~~~G~~~~~~i~~~l~ 176 (514)
.|..+++..+.++|.++++.+..++.
T Consensus 164 kRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 164 KRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988876
No 238
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.94 E-value=1e-07 Score=86.58 Aligned_cols=143 Identities=16% Similarity=0.227 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhh-----hhCChHHHHH-HHH
Q 010268 29 CVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSD-----NFGRRKGFLI-TAI 102 (514)
Q Consensus 29 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~D-----r~G~r~~l~~-~~~ 102 (514)
.-+..+.+.+..++...+..+ .+|.+.+.-|.|.++.+...-++. -.-.-+.|.++.| |+||||..++ +..
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~--P~sLKllWaPiVDs~y~k~~GrrksWvvp~q~ 107 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQY 107 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhh--HHHHHHHHHhhhHHHHHHhhccccceeeehHH
Confidence 334445566788888888887 899999988999998886554442 2345688999999 9999987443 233
Q ss_pred HHHHHHHHHhhh-----------hhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHH
Q 010268 103 VTSAAGLLSAFA-----------PNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAG 170 (514)
Q Consensus 103 ~~~~~~~~~~~~-----------~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~ 170 (514)
+.+..+.+++.- ++...+...-++.-+..+.- .+...+...+..+++-|.+......+.+.|..++..
T Consensus 108 llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ 187 (510)
T KOG3574|consen 108 LLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNV 187 (510)
T ss_pred HHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcc
Confidence 333223322221 22233333344555555555 444577777788889999999888888888888765
Q ss_pred HHHH
Q 010268 171 IAWL 174 (514)
Q Consensus 171 i~~~ 174 (514)
+.-.
T Consensus 188 ifLa 191 (510)
T KOG3574|consen 188 VFLA 191 (510)
T ss_pred eeeE
Confidence 5433
No 239
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.93 E-value=7.1e-08 Score=90.71 Aligned_cols=156 Identities=33% Similarity=0.448 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCCc--chhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhh
Q 010268 39 ISEAMEMMLLSFVGPAVQSLWHLSP--NQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPN 116 (514)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~s~--~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~ 116 (514)
+....+........+.+..+++.+. ...+++.+.+.++..++.++.|.++||+|||+.+..+.....++.++..+..+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~ 91 (338)
T COG0477 12 LLLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN 91 (338)
T ss_pred HHHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCcc
Confidence 3334666666777888888887777 58999999999999999999999999999998888888765666666666665
Q ss_pred --HHHHHHHHHHHhhhccch-hhHHHHHHhhcCC-CchhHHHHHHHH-HHHHHHHHHHHHHHHHhcc--cchHHHHHHhH
Q 010268 117 --YYLLLFFRCLVGLGLGGG-PVLASWFLEFIPA-PNRGFWMVIFQT-FWTVGTILEAGIAWLVMPR--LGWRWLLGLSA 189 (514)
Q Consensus 117 --~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~G~~~~~~i~~~l~~~--~gw~~~f~~~~ 189 (514)
.+.+++.|+..|++.+.. +...+++.++.++ ++|+...+.... ...+|..++|.+++.+... .+||..|....
T Consensus 92 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (338)
T COG0477 92 VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAA 171 (338)
T ss_pred chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 889999999999999877 7777899999887 689999998888 5888899998777776553 57988666555
Q ss_pred HHHHH
Q 010268 190 FPSSL 194 (514)
Q Consensus 190 ~~~~i 194 (514)
.....
T Consensus 172 ~~~~~ 176 (338)
T COG0477 172 LLGLL 176 (338)
T ss_pred HHHHH
Confidence 54433
No 240
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.91 E-value=2e-08 Score=101.33 Aligned_cols=139 Identities=19% Similarity=0.089 Sum_probs=119.3
Q ss_pred ccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeecccccc
Q 010268 357 YGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIY 436 (514)
Q Consensus 357 ~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 436 (514)
+++.+...++..++.++.|+++|++|||+.+.++.+...++.++.....+...+.+.-++.|++.++...+...+.+|+.
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEia 171 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIA 171 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcC
Confidence 68888899999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred CcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhc--CchhHHHHHHHHHHHHHHHhhcccccc
Q 010268 437 PTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGC--HQTAALILFELVILLSGISVLLFPFET 497 (514)
Q Consensus 437 p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (514)
|++.||...+.......+|..++ .+.+...++. +|...+.+..+.+++..+. .++.||+
T Consensus 172 p~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pes 232 (513)
T KOG0254|consen 172 PAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPES 232 (513)
T ss_pred ChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCC
Confidence 99999999999999988887777 6666655543 6776666666666666666 5555654
No 241
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.90 E-value=6.4e-09 Score=105.39 Aligned_cols=142 Identities=17% Similarity=0.138 Sum_probs=123.0
Q ss_pred cccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeec
Q 010268 352 SRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVY 431 (514)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 431 (514)
+.....+..+++.++..+|.++.|.++||+|||+++..+.++..++.+...+.++.+...++-++.|++.++.......+
T Consensus 116 ~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~ 195 (521)
T KOG0255|consen 116 SSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGL 195 (521)
T ss_pred cHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhh
Confidence 33444667788889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcccccc
Q 010268 432 APEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFPFET 497 (514)
Q Consensus 432 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (514)
..|.++++.|+.+..+ ..+...++.++|.+.+++.. +|.+.+++..+...+..++ +++.+|.
T Consensus 196 ~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es 257 (521)
T KOG0255|consen 196 VAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPES 257 (521)
T ss_pred heeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcC
Confidence 9999999999999999 88888999999999999887 6777777777766665555 4444454
No 242
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.90 E-value=3.1e-08 Score=91.31 Aligned_cols=172 Identities=16% Similarity=0.109 Sum_probs=134.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHH
Q 010268 310 STLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSS 389 (514)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~ 389 (514)
.++.....++...+..-......|.+.+..+ .+..++++....+..+..++.+..+++.+|+|+|+-++.
T Consensus 14 ~~v~~t~lFfl~G~~~~l~diLip~l~~~f~----------ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~l 83 (422)
T COG0738 14 AFVLLTSLFFLWGFITCLNDILIPHLKEVFD----------LTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVL 83 (422)
T ss_pred HHHHHHHHHHHHHHHhhcchhhHHHHHHHhC----------ccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHH
Confidence 3444455555666666666677777765444 777788888888889999999999999999999999999
Q ss_pred HHHHHHHHhhhhh---cccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHH
Q 010268 390 MFFCCCIFLVPLL---FQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVAL 466 (514)
Q Consensus 390 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l 466 (514)
+..++++++.+++ ...++......+++.+.+.+......+.++..+.|++..+.-+.+...+..+|++++|++++.+
T Consensus 84 gL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~l 163 (422)
T COG0738 84 GLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSL 163 (422)
T ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 9999999888886 3334555666778888999999999999999999998889999999999999999999999998
Q ss_pred Hhh-------------------cCchhHHHHHHHHHHHHHHHhh
Q 010268 467 VHG-------------------CHQTAALILFELVILLSGISVL 491 (514)
Q Consensus 467 ~~~-------------------~g~~~~~~~~~~~~~~~~~~~~ 491 (514)
..+ ..+..++...+...++..+...
T Consensus 164 ils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~ 207 (422)
T COG0738 164 ILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLIL 207 (422)
T ss_pred HHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 873 1134556666665555554443
No 243
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.85 E-value=3.1e-08 Score=94.22 Aligned_cols=164 Identities=14% Similarity=0.073 Sum_probs=141.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHH
Q 010268 39 ISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYY 118 (514)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~ 118 (514)
++.+.........+-.-.+|++-.+...|........+-.+.-++.+++..|+|+-+++.+++.+..+=.+..++.+|.|
T Consensus 381 v~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W 460 (618)
T KOG3762|consen 381 VVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPW 460 (618)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCch
Confidence 33344444444445556788998888899888888889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHH-HHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHH
Q 010268 119 LLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQT-FWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLL 196 (514)
Q Consensus 119 ~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~ 196 (514)
..+-.-+++|+..+.. ..+.+|+....||+-|..+-++.+. ..++|--+|.+++|.+.++++-|..|.+.++.+++.+
T Consensus 461 ~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l 540 (618)
T KOG3762|consen 461 MVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTL 540 (618)
T ss_pred heeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHH
Confidence 9999999999999999 6677999999999999999998655 5788999999999999999999999999999888877
Q ss_pred HHHHHc
Q 010268 197 LLYSVT 202 (514)
Q Consensus 197 ~~~~~~ 202 (514)
++...+
T Consensus 541 ~~~~~i 546 (618)
T KOG3762|consen 541 ALFISI 546 (618)
T ss_pred HHHHHh
Confidence 665544
No 244
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.84 E-value=5.2e-06 Score=83.13 Aligned_cols=154 Identities=16% Similarity=0.176 Sum_probs=121.9
Q ss_pred HHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhh-CChHHHHHHHHHHHHHHHHHhhhhh----------
Q 010268 48 LSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNF-GRRKGFLITAIVTSAAGLLSAFAPN---------- 116 (514)
Q Consensus 48 ~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~-G~r~~l~~~~~~~~~~~~~~~~~~~---------- 116 (514)
...++.++.++++.+...+.-..+.+.-......+.+++++|-| ||-+++.++.++..+|..+..++..
T Consensus 57 ~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~ 136 (571)
T KOG1237|consen 57 VSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCK 136 (571)
T ss_pred hhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcccc
Confidence 45667788889999998888888889888899999999999975 8889999999988888666544321
Q ss_pred ---------------HHHHHHHHHHHhhhccch-hhHHHHHHhhcC---C-C--chhHHHHHHHHHHHHHHHHHHHHHHH
Q 010268 117 ---------------YYLLLFFRCLVGLGLGGG-PVLASWFLEFIP---A-P--NRGFWMVIFQTFWTVGTILEAGIAWL 174 (514)
Q Consensus 117 ---------------~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~---~-~--~r~~~~~~~~~~~~~G~~~~~~i~~~ 174 (514)
...++...-+..+|.|.. +...++-+|.++ + + .+...+.++....++|..++..+..+
T Consensus 137 ~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vy 216 (571)
T KOG1237|consen 137 FKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVY 216 (571)
T ss_pred CCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHh
Confidence 234666677788888888 888888888887 2 2 22367888999999999999888888
Q ss_pred HhcccchHHHHHHhHHHHHHHHHHHHH
Q 010268 175 VMPRLGWRWLLGLSAFPSSLLLLLYSV 201 (514)
Q Consensus 175 l~~~~gw~~~f~~~~~~~~i~~~~~~~ 201 (514)
.-+..+|...|.+..+..++++++++.
T Consensus 217 iq~~~~w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 217 IQDNVGWKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred hhhcccceeeccHHHHHHHHHHHHHHc
Confidence 878899999999988877777665544
No 245
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.81 E-value=3.2e-08 Score=89.54 Aligned_cols=128 Identities=17% Similarity=0.148 Sum_probs=98.2
Q ss_pred HHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhH----HHHHHHHHHHhhhccchhhHHHHHHhhcCCCc
Q 010268 74 FAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNY----YLLLFFRCLVGLGLGGGPVLASWFLEFIPAPN 149 (514)
Q Consensus 74 ~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~----~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~ 149 (514)
.+.-.-+.++.+.+.||+|||++|..+.+++++..++...+.+- .+++.+|++.. |++.+++.|..|.+|...
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafis---g~fqvaYvYtPEVyPTav 467 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFIS---GAFQVAYVYTPEVYPTAV 467 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHh---chheEEEEecCcccchhh
Confidence 34456688999999999999999999999999988887766432 23444565443 333566678899999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHHHHccCCh
Q 010268 150 RGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLLYSVTPESP 206 (514)
Q Consensus 150 r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~ 206 (514)
|+...|.-.....+|.++.|+++ +....+-..+..+.+..++++.+...++|-.+
T Consensus 468 RatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 468 RATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred hhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeecc
Confidence 99999999999999999999999 33334555666777777777777777777544
No 246
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.80 E-value=3.9e-08 Score=69.92 Aligned_cols=81 Identities=19% Similarity=0.169 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHH
Q 010268 41 EAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLL 120 (514)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l 120 (514)
.+..++.+++++|.+.+|.++|.++.|++.+...+||.++.+...++.++..+++.+..+.++..+..+.+++.++.+.+
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 46788999999999999999999999999999999999999999999999888999999999999999999999887765
Q ss_pred H
Q 010268 121 L 121 (514)
Q Consensus 121 ~ 121 (514)
.
T Consensus 84 ~ 84 (85)
T PF06779_consen 84 S 84 (85)
T ss_pred h
Confidence 3
No 247
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.77 E-value=4.4e-08 Score=97.27 Aligned_cols=148 Identities=15% Similarity=0.138 Sum_probs=118.6
Q ss_pred hhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhh----------hhhHHHHHHHHHH
Q 010268 57 SLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAF----------APNYYLLLFFRCL 126 (514)
Q Consensus 57 ~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~----------~~~~~~l~~~r~l 126 (514)
+.+|.++.+.|++.+...++..++....+++.+|++.|+++.++.++.+++.+.... .++.+.++...++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 568999999999999999999999999999999999999999999998887755431 1333445556778
Q ss_pred Hhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccc-----hHHHHHH---hHHHHHHHHH
Q 010268 127 VGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLG-----WRWLLGL---SAFPSSLLLL 197 (514)
Q Consensus 127 ~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~g-----w~~~f~~---~~~~~~i~~~ 197 (514)
.+++.+.. .+...++.+..|++.+|...++..+..++|..+++.+++.+.+..| ++..+.. ..+..++.+.
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~ 440 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLP 440 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHH
Confidence 88888877 6667899999999999999999999999999999999999988776 5544443 3333344444
Q ss_pred HHHHccC
Q 010268 198 LYSVTPE 204 (514)
Q Consensus 198 ~~~~~~~ 204 (514)
+.+++|+
T Consensus 441 ~~~llP~ 447 (468)
T TIGR00788 441 LLHLLPR 447 (468)
T ss_pred HHHhCCC
Confidence 4556785
No 248
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.76 E-value=1e-06 Score=80.25 Aligned_cols=160 Identities=17% Similarity=0.130 Sum_probs=127.3
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhh-CChHHHHHHHHHHHHHHHHHhhhhhHH
Q 010268 40 SEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNF-GRRKGFLITAIVTSAAGLLSAFAPNYY 118 (514)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~-G~r~~l~~~~~~~~~~~~~~~~~~~~~ 118 (514)
++.+..+....-+|.+..|.|+|..+.|++.+...+.....++....+++|. ++|+..+....++.+|.+.+.+.|.-.
T Consensus 219 lqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~ 298 (395)
T COG2807 219 LQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQL 298 (395)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhH
Confidence 4444455566668999999999999999999999999999999999999975 567888888888888988888877543
Q ss_pred HHHHHHHHHhhhccch-hhHHHHHHhhc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhccc-chHHHHHHhHHHHHHH
Q 010268 119 LLLFFRCLVGLGLGGG-PVLASWFLEFI-PAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRL-GWRWLLGLSAFPSSLL 195 (514)
Q Consensus 119 ~l~~~r~l~G~~~g~~-~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~-gw~~~f~~~~~~~~i~ 195 (514)
.++- .++.|+|.|.. +.+...+.+.. .+++-++..++.+....+=..+||.+.|++-|.. +|+..+.......+..
T Consensus 299 ~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m 377 (395)
T COG2807 299 PILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLM 377 (395)
T ss_pred HHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHH
Confidence 3333 58999998887 77777777655 4566677778888888888889999999998854 5999988877777766
Q ss_pred HHHHH
Q 010268 196 LLLYS 200 (514)
Q Consensus 196 ~~~~~ 200 (514)
.+.-+
T Consensus 378 ~i~Gl 382 (395)
T COG2807 378 LIFGL 382 (395)
T ss_pred HHHHh
Confidence 65533
No 249
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.76 E-value=1e-06 Score=84.57 Aligned_cols=142 Identities=19% Similarity=0.254 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHHHHHHhhh-hcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhh--
Q 010268 39 ISEAMEMMLLSFVGPAVQS-LWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAP-- 115 (514)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~-- 115 (514)
++........+.+..++.+ .+|.+..+..+.......+..++.+++.++.+|+|+|+++.++.++.+++.++..+.+
T Consensus 246 l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~ 325 (467)
T COG2211 246 LLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAG 325 (467)
T ss_pred HHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 3334444444555555443 3677777788888888888888899999999999999999999999999999988876
Q ss_pred hHHHHHHHHHHHhhhccch-hhHHHHHHhhc-------CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 010268 116 NYYLLLFFRCLVGLGLGGG-PVLASWFLEFI-------PAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLG 180 (514)
Q Consensus 116 ~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~-------~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~g 180 (514)
+.+.+++..++.+++.+.. +...++++|.. ..+.-|...+.+..+.=+|..++..+.++.++..|
T Consensus 326 ~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 326 SVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred chHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 6788888899999999887 55567765543 23345777788888888999999988888765444
No 250
>PRK11462 putative transporter; Provisional
Probab=98.70 E-value=5.7e-06 Score=82.18 Aligned_cols=120 Identities=13% Similarity=0.108 Sum_probs=80.0
Q ss_pred CcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHhhhccch-hhHH
Q 010268 62 SPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPN--YYLLLFFRCLVGLGLGGG-PVLA 138 (514)
Q Consensus 62 s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~--~~~l~~~r~l~G~~~g~~-~~~~ 138 (514)
++...+.+.+.+.++..++.+++++++||+|+|+.+..+..+.++..++..+.++ ...+++.-++.|++.+.. +...
T Consensus 261 ~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~ 340 (460)
T PRK11462 261 TPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQW 340 (460)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444566777888888999999999999999999877555544443333333322 333444556677776665 4444
Q ss_pred HHHHhhcC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 010268 139 SWFLEFIP-------APNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGW 181 (514)
Q Consensus 139 ~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw 181 (514)
+++.|..+ +++.|..++.......+|..+++.+++.+.+..|+
T Consensus 341 ~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 341 VMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 66665544 33345556777788889999999998887754444
No 251
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.69 E-value=5.5e-08 Score=90.80 Aligned_cols=116 Identities=13% Similarity=0.018 Sum_probs=90.4
Q ss_pred CcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcc--c-Cc----chhHHHHHHHHhhhcc
Q 010268 351 KSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQ--Q-PK----GLTTGLLFGARICITV 423 (514)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~-~~----~~~~~~~~~~g~~~~~ 423 (514)
.++...+.......++.++|+++.|++.||+|||++....+++++++.++.... . ++ +.+...=++.|++.|+
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGG 160 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGG 160 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccC
Confidence 445555777888889999999999999999999999988888887776644422 1 11 3444556789999999
Q ss_pred cccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHH
Q 010268 424 TFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVAL 466 (514)
Q Consensus 424 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l 466 (514)
=+|+..++++|....+.||+-.+...+++..|...|..+.-.+
T Consensus 161 DYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv 203 (538)
T KOG0252|consen 161 DYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIV 203 (538)
T ss_pred CCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHH
Confidence 9999999999999999999999888888777766555544433
No 252
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.69 E-value=1.3e-07 Score=92.74 Aligned_cols=149 Identities=14% Similarity=0.033 Sum_probs=127.7
Q ss_pred CcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceee
Q 010268 351 KSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYV 430 (514)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 430 (514)
....+.+...+++.++.+++.+.++.+.||++..+.+..+.++..+..++-....+.+.+++.-++.|++.++.+|....
T Consensus 78 ~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~ 157 (495)
T KOG2533|consen 78 LVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVA 157 (495)
T ss_pred hhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHH
Confidence 44555678888999999999999999999999777777777666665555555778888889999999999999999999
Q ss_pred ccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHH------hhcCchhHHHHHHHHHHHHHHHhhcccccccC
Q 010268 431 YAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALV------HGCHQTAALILFELVILLSGISVLLFPFETTG 499 (514)
Q Consensus 431 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (514)
++...+.+++|++.+|+.+....+|+++|+++...+. ...||.+.|++-+++.++.+++.++..|+...
T Consensus 158 ~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 158 ILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred HHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 9999999999999999999999999999999998864 34578999999999999999888887765443
No 253
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.68 E-value=1.3e-07 Score=84.84 Aligned_cols=369 Identities=13% Similarity=0.046 Sum_probs=211.0
Q ss_pred hcCCCcchhH-HHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhh
Q 010268 58 LWHLSPNQES-LITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCLVGLGLGGGPV 136 (514)
Q Consensus 58 ~~~~s~~~~g-~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 136 (514)
+.+++..++- -+.=+..-.+.+.-.+.=.+.|..-.|+++++-.+.......++.+.++.+.+=+.-+..|...+...+
T Consensus 35 ~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaEIA 114 (433)
T KOG3810|consen 35 DKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAEIA 114 (433)
T ss_pred CCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHHHh
Confidence 4455554432 233334445667777888899999889998888777788888888999999988888998887776666
Q ss_pred HHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcc--cchHHHHHHhHHHHHHHHHHHHHccCChhhhhccCC
Q 010268 137 LASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPR--LGWRWLLGLSAFPSSLLLLLYSVTPESPRYLCLKGR 214 (514)
Q Consensus 137 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~--~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 214 (514)
.++++-+.++++++.++.|...+..-.|-..|..++..+.+. .++...-.+......+...+.+++|..++....+.+
T Consensus 115 YysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~ 194 (433)
T KOG3810|consen 115 YYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRL 194 (433)
T ss_pred hhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhcc
Confidence 778898999999999999999999999999998888887753 344445555555556666777788876532211111
Q ss_pred chHHHHHHHHHHHHhCCCCCCCCCCCchhhhhhhhhcccCCCCCCCCCccccccCCCchhHhhhhccCCccccccccccc
Q 010268 215 TAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKSLLSSSSNEDDTTPKEMARDEDSISEAKEMKSEDSTSTLANSNMG 294 (514)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (514)
+++ .. ..+.++..++.+..+- .+ .-...
T Consensus 195 ~~~--~~-----------------------------------------v~~~e~~~~~~~~~~~-l~--------~~~~~ 222 (433)
T KOG3810|consen 195 EDK--IS-----------------------------------------VGDLEEMNPQASYMSY-LR--------GAFVL 222 (433)
T ss_pred ccc--ce-----------------------------------------eccchhcCccchhhHH-HH--------HHHHH
Confidence 110 00 0000000000000000 00 00000
Q ss_pred hhhHHHHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHH
Q 010268 295 GITALLILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLA 374 (514)
Q Consensus 295 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 374 (514)
-++.+.+..+++... --.+-+......++-+..+...+-++.. ........|..=.+..+.++++.+..
T Consensus 223 l~~~l~~~y~np~ll---~WSlWwAl~scg~~QV~nY~Q~LW~~~~--------~~~~~vyNG~veAv~tlLGa~~~~~~ 291 (433)
T KOG3810|consen 223 LWRDLQECYSNPRLL---KWSLWWALASCGYYQVTNYTQILWKEVA--------PNPANVYNGAVEAVSTLLGAIAALAA 291 (433)
T ss_pred HHHHHHHHhcCchhh---hhHHHHHHhhchhHHHHHHHHHHHHhhC--------CCchhhhcCHHHHHHHHHHHHHHHHH
Confidence 011222333332211 1111222333344444444444332210 00111122445556667777788888
Q ss_pred HHHHHHHhhH--HHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHH
Q 010268 375 AAMVDRLGRK--LSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIG 452 (514)
Q Consensus 375 g~l~dr~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~ 452 (514)
|.+--...|. .++.++....+-.++.+....+.|+..+...+.........++...-+++....+.-|..+|+...+.
T Consensus 292 g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvA 371 (433)
T KOG3810|consen 292 GYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVA 371 (433)
T ss_pred HheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHH
Confidence 8875544444 34445555555555556667777877777777766666666666666677777777788888777655
Q ss_pred HHhHhHHHHHHHHHHhhcC-----------chhHHHHHHHHHHHHHHHhhc
Q 010268 453 RIGGMVCPLVAVALVHGCH-----------QTAALILFELVILLSGISVLL 492 (514)
Q Consensus 453 ~~g~~~~p~i~g~l~~~~g-----------~~~~~~~~~~~~~~~~~~~~~ 492 (514)
-+-..+-..+ +.|..| +...|.+.+++.++...+.+.
T Consensus 372 l~lQsilT~i---Vvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~ 419 (433)
T KOG3810|consen 372 LILQSILTLI---VVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYL 419 (433)
T ss_pred HHHHHhheEE---EEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHH
Confidence 4444333322 234222 223466667776666555443
No 254
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.65 E-value=7.4e-06 Score=76.59 Aligned_cols=150 Identities=18% Similarity=0.183 Sum_probs=123.1
Q ss_pred HHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhh-hhCChHHHHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHH
Q 010268 52 GPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSD-NFGRRKGFLITAIVTSAAGLLSAFA---PNYYLLLFFRCLV 127 (514)
Q Consensus 52 ~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~D-r~G~r~~l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~ 127 (514)
-|+=.+-||.|..+...+.+....|..++-...|++.. |.++++.-.+++.+.+++..+..++ .+.+.+...-++.
T Consensus 232 EPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~ 311 (403)
T PF03209_consen 232 EPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLL 311 (403)
T ss_pred CCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 35556779999999999999999999999999999888 6778888888888888777665444 5788899999999
Q ss_pred hhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc----------ccchHHHHHHhHHHHHHHH
Q 010268 128 GLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMP----------RLGWRWLLGLSAFPSSLLL 196 (514)
Q Consensus 128 G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~----------~~gw~~~f~~~~~~~~i~~ 196 (514)
|++.|.+ ....+.+.+...+++.|..+|.+.....++..++..+++.+.| ..+|..+|.+-++..++.+
T Consensus 312 G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~ 391 (403)
T PF03209_consen 312 GLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAAL 391 (403)
T ss_pred HHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHH
Confidence 9999999 4455888899999999999999999999999999999887654 1346777777777777666
Q ss_pred HHHHH
Q 010268 197 LLYSV 201 (514)
Q Consensus 197 ~~~~~ 201 (514)
++...
T Consensus 392 ~ll~~ 396 (403)
T PF03209_consen 392 VLLGR 396 (403)
T ss_pred HHHHH
Confidence 65543
No 255
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.63 E-value=3.1e-07 Score=65.08 Aligned_cols=70 Identities=20% Similarity=0.265 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHH
Q 010268 35 GMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVT 104 (514)
Q Consensus 35 ~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~ 104 (514)
-..+++.+.......|..|.+.++.|+|+.++|++.++..+...++++++|.++||+++++.++....++
T Consensus 6 k~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 6 KAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 3455666777778888899999999999999999999999999999999999999999998887766543
No 256
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.61 E-value=2.2e-07 Score=82.32 Aligned_cols=138 Identities=16% Similarity=0.077 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Q 010268 320 GNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLV 399 (514)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 399 (514)
......|.+..|.|.+.+..+ .++.+...+.....++..+| ++.|.+.|++|.+.++.++.+...+++.
T Consensus 13 ~~~Gt~Y~Fs~yS~~Lk~~l~----------~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~ 81 (250)
T PF06813_consen 13 LCSGTTYTFSAYSPQLKSRLG----------YSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYG 81 (250)
T ss_pred HhcCcccchhhhhHHHHHHhC----------CCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 334456777888888886655 77777777777777777765 8889999999999999999999988887
Q ss_pred hhhcc-------cCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhh
Q 010268 400 PLLFQ-------QPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHG 469 (514)
Q Consensus 400 ~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~ 469 (514)
.++.. .+.|.+.+..++.+.+.............+.+| ++||++.|+.-....+++.+-..+...+.+.
T Consensus 82 ~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 82 LLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 76631 122333333334333333333444444557888 5799999999999999999888888776655
No 257
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.48 E-value=2.8e-09 Score=106.15 Aligned_cols=140 Identities=18% Similarity=0.085 Sum_probs=111.3
Q ss_pred ccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhccc---CcchhHHHHHHHHhhhcccccceeeccc
Q 010268 357 YGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQ---PKGLTTGLLFGARICITVTFTVVYVYAP 433 (514)
Q Consensus 357 ~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 433 (514)
....+...++.++|.++.|++.||+|||+.+..+.++..++.++..+.+ +.+.+.+.-++.|++.++..+....++.
T Consensus 49 ~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~ 128 (451)
T PF00083_consen 49 SLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYIS 128 (451)
T ss_pred HHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 5677888899999999999999999999999999999999888888887 7888888889999999999999999999
Q ss_pred cccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcC---chhHHHHHHHHHHHHHHHhhcccccc
Q 010268 434 EIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCH---QTAALILFELVILLSGISVLLFPFET 497 (514)
Q Consensus 434 ~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (514)
|..|++.|+...++......+|..++..+.-.+.+..+ |...+.+..+..++..+ ...+.||+
T Consensus 129 E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pES 194 (451)
T PF00083_consen 129 EIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLL-LRFFLPES 194 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence 99999999999999998888888887776544433222 44444444444433333 33445554
No 258
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.48 E-value=9.9e-06 Score=66.17 Aligned_cols=106 Identities=12% Similarity=0.198 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCC
Q 010268 69 ITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPA 147 (514)
Q Consensus 69 i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~ 147 (514)
-.++......+++++.+.+.+++|.|+.++++.+...+-.+. -+-++.+.++.+-++.|++.+.. .+...++.+...+
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~-~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~ 120 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIAS-FFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTE 120 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH
Confidence 335556667888889999999999999999999987754443 35677889999999999999998 4555899999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010268 148 PNRGFWMVIFQTFWTVGTILEAGIAWLV 175 (514)
Q Consensus 148 ~~r~~~~~~~~~~~~~G~~~~~~i~~~l 175 (514)
++|++..+++......+.++|.++..++
T Consensus 121 ~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 121 ETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998988888776654
No 259
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.46 E-value=8.7e-05 Score=72.39 Aligned_cols=105 Identities=9% Similarity=0.007 Sum_probs=64.7
Q ss_pred ccchhhhhhchhhHHHHHHHHHHHHhhH-HHHHHHHHHHHH---Hhhhhh---------cccCcchhHHHHHHHHhhhcc
Q 010268 357 YGDVFITSFAEFPGLLLAAAMVDRLGRK-LSMSSMFFCCCI---FLVPLL---------FQQPKGLTTGLLFGARICITV 423 (514)
Q Consensus 357 ~~~~~~~~~~~~~g~~~~g~l~dr~g~~-~~~~~~~~~~~~---~~~~~~---------~~~~~~~~~~~~~~~g~~~~~ 423 (514)
.....++.++..+|+.+..+..- -++| +.+.+..+.=.+ .+++.. ..++.+..++..++.|+..|-
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~~-p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFMW-PDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeEe-eCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 45677778888898886654311 1112 122222222211 111111 123456667778888899888
Q ss_pred cccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHH
Q 010268 424 TFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLV 462 (514)
Q Consensus 424 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i 462 (514)
.....+.+..+.+++++|..+-.+...+-.+|-.+|..+
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888999988888777777766666776666654
No 260
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.44 E-value=0.00097 Score=65.66 Aligned_cols=154 Identities=12% Similarity=0.069 Sum_probs=94.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHH-HHHHhhhhHHhhhhhhCChHHHHHHH
Q 010268 23 FGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFA-GMLVGAYSWGIVSDNFGRRKGFLITA 101 (514)
Q Consensus 23 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~-~~~i~~~~~G~l~Dr~G~r~~l~~~~ 101 (514)
..+..+..++.+.+.+++..+.....=.+-..+.-+ ...++.+..+=....+ ...+......++++|+++.+++-+..
T Consensus 18 i~~~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt-~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~ 96 (491)
T PF03219_consen 18 IHRSELKKFLPLALMFFFILFNYTILRDLKDTLVVT-AQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIII 96 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEe-cCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 345555566666666666666554443222221111 1255555665554444 44566788999999999999877666
Q ss_pred HHHHHHHHHHhhh---------h----------------------hHHHHHHHHHHHhhhccch-hhH-HHHHHhhcCCC
Q 010268 102 IVTSAAGLLSAFA---------P----------------------NYYLLLFFRCLVGLGLGGG-PVL-ASWFLEFIPAP 148 (514)
Q Consensus 102 ~~~~~~~~~~~~~---------~----------------------~~~~l~~~r~l~G~~~g~~-~~~-~~~i~~~~~~~ 148 (514)
........+.++. + +.|.+.+..++.-+-.... +.. ..+..|.+..+
T Consensus 97 ~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~ 176 (491)
T PF03219_consen 97 IPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVE 176 (491)
T ss_pred HHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 5555555544432 1 1122222233222322222 322 36778999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 010268 149 NRGFWMVIFQTFWTVGTILEAGIAWLVMP 177 (514)
Q Consensus 149 ~r~~~~~~~~~~~~~G~~~~~~i~~~l~~ 177 (514)
+-.|..+++..+.++|.++++.+...+.+
T Consensus 177 eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 177 EAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988887776
No 261
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.43 E-value=0.00051 Score=65.70 Aligned_cols=151 Identities=12% Similarity=0.069 Sum_probs=99.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc---CCCcchhHHHHHHHHH-HHHHhhhhHHhhhhhhCChHHHH
Q 010268 23 FGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLW---HLSPNQESLITSVVFA-GMLVGAYSWGIVSDNFGRRKGFL 98 (514)
Q Consensus 23 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~s~~~~g~i~s~~~~-~~~i~~~~~G~l~Dr~G~r~~l~ 98 (514)
..+..+..++.+.+.+++..+.....-. +.+.+ ...++.+.++=+...+ +..+..++.+++.+++.+.+++-
T Consensus 21 i~r~E~~kflpl~Ll~f~I~~ny~~lR~----lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~ 96 (509)
T COG3202 21 IRRYELKKFLPLALLFFCILFNYNLLRS----LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFY 96 (509)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHH----hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHH
Confidence 3455555555555555665555444433 33443 3456667777777777 67789999999999999999987
Q ss_pred HHHHHHHHHHHHHhhh---------hh-----------------------HHHHHHHHHHHhhhccch-hhH-HHHHHhh
Q 010268 99 ITAIVTSAAGLLSAFA---------PN-----------------------YYLLLFFRCLVGLGLGGG-PVL-ASWFLEF 144 (514)
Q Consensus 99 ~~~~~~~~~~~~~~~~---------~~-----------------------~~~l~~~r~l~G~~~g~~-~~~-~~~i~~~ 144 (514)
+.+..+....+++++. ++ .|...+..++.=+-.... ... .....|.
T Consensus 97 ~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNei 176 (509)
T COG3202 97 IILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEI 176 (509)
T ss_pred HHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7766666666665543 11 122222222222222222 222 2567888
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 010268 145 IPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMP 177 (514)
Q Consensus 145 ~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~ 177 (514)
+..++-.|..+++..+.+++..++..+..++..
T Consensus 177 tt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 177 TTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred hhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 888999999999999999999999988888765
No 262
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.40 E-value=9.4e-06 Score=77.31 Aligned_cols=141 Identities=16% Similarity=0.177 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh--cCCCcchhHHHHHHHHHHHHHhhhhHHhhhh-----hhCChHHHHHHH-HHH
Q 010268 33 YAGMGWISEAMEMMLLSFVGPAVQSL--WHLSPNQESLITSVVFAGMLVGAYSWGIVSD-----NFGRRKGFLITA-IVT 104 (514)
Q Consensus 33 ~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~D-----r~G~r~~l~~~~-~~~ 104 (514)
++.+.+++++...+.....+|.+.++ -+.|.+|.|...-+ ...+. .-++|.++.| |+||||..++=. .+.
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla-~~PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~ 81 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLA-SYPFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQYLS 81 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeee-echhH-HHHhhhhhhhhhcccccCCcchhhhHHHHHH
Confidence 34556777877766665667888888 78898888764432 22222 3567777777 799999855432 222
Q ss_pred HHHHHHHhhhh----------------------hHH--HHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHH
Q 010268 105 SAAGLLSAFAP----------------------NYY--LLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQT 159 (514)
Q Consensus 105 ~~~~~~~~~~~----------------------~~~--~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~ 159 (514)
++..+..+... +.. .+...-++.=+-.+.- .++..+.-....+++++.+..-...
T Consensus 82 g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtv 161 (544)
T PF13000_consen 82 GILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTV 161 (544)
T ss_pred HHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHh
Confidence 33222222111 011 1122222222333443 3444666666788899999998888
Q ss_pred HHHHHHHHHHHHHHHH
Q 010268 160 FWTVGTILEAGIAWLV 175 (514)
Q Consensus 160 ~~~~G~~~~~~i~~~l 175 (514)
+.++|..++..+.-.+
T Consensus 162 G~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 162 GQTAGYFLSFTVFLAL 177 (544)
T ss_pred HhhhhHHHHHHHHHhh
Confidence 8888888877665544
No 263
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.34 E-value=1.1e-05 Score=78.74 Aligned_cols=138 Identities=22% Similarity=0.233 Sum_probs=110.8
Q ss_pred hhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhh
Q 010268 363 TSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRT 442 (514)
Q Consensus 363 ~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~ 442 (514)
.++..++.+.+.|.++||+|||..+......+.+....+.+.. |+..+ ..-...+.+..+....+++++....+.|.
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~-~~~l~g~~~~~~s~~~a~vadis~~~~R~ 147 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--YWFFL-LLGLSGGFSAIFSVGFAYVADISSEEERS 147 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HHHhh-hcccccchhhhhhhhhhheeeccchhHHH
Confidence 3677788889999999999999999888877777665555443 22222 22222334556678889999999999999
Q ss_pred HHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhcccccccCcCCC
Q 010268 443 TGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFPFETTGRGLS 503 (514)
Q Consensus 443 ~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (514)
..+|+.+.....+..++|.+.+.+....|....+.+..+..++..+...+..||+...+.+
T Consensus 148 ~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~ 208 (463)
T KOG2816|consen 148 SSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKER 208 (463)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccc
Confidence 9999999999999999999999999999999999999999999998888888887665544
No 264
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.34 E-value=2.5e-06 Score=82.17 Aligned_cols=152 Identities=15% Similarity=0.084 Sum_probs=106.7
Q ss_pred CCCcccCcccchhhhhhchhhHHHHHHHHHHHHhh-HHHHHHHHHHHHHHhhhhh---ccc--CcchhHHHHHHHHhhhc
Q 010268 349 SGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGR-KLSMSSMFFCCCIFLVPLL---FQQ--PKGLTTGLLFGARICIT 422 (514)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~-~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~g~~~~ 422 (514)
.+.+.+..|+..+...++.+++++..|+...|.+. |+.++.+.++++++.+++. ..+ ..+.+++.-++.|++.+
T Consensus 66 ~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~ 145 (488)
T KOG2325|consen 66 PTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG 145 (488)
T ss_pred CCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc
Confidence 34555566888999999999999999999999885 7777788888877766662 222 33455555666666654
Q ss_pred ccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhh------------cC-chhHHHHHHHHHHHHHHH
Q 010268 423 VTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHG------------CH-QTAALILFELVILLSGIS 489 (514)
Q Consensus 423 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~------------~g-~~~~~~~~~~~~~~~~~~ 489 (514)
. ....-.++++..-.+.|.++++..+....+|.++||.+...+..- ++ +..+-++.+++.++..++
T Consensus 146 n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~ 224 (488)
T KOG2325|consen 146 N-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVI 224 (488)
T ss_pred c-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHH
Confidence 4 355666777766667888888888887778888887776554321 11 345677788888888888
Q ss_pred hhcccccccCcC
Q 010268 490 VLLFPFETTGRG 501 (514)
Q Consensus 490 ~~~~~~~~~~~~ 501 (514)
..+..+|..+..
T Consensus 225 i~~~f~E~~~~~ 236 (488)
T KOG2325|consen 225 ILFFFKEVYRGI 236 (488)
T ss_pred HHhheeecccCc
Confidence 777777655443
No 265
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.09 E-value=0.00012 Score=67.51 Aligned_cols=149 Identities=12% Similarity=-0.015 Sum_probs=105.0
Q ss_pred CCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhccccccee
Q 010268 350 GKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVY 429 (514)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 429 (514)
+++..+...++....+...+...+.|.+.||+|||+..+...++.+++++.-. .++.+.+++.-++.|++....++..-
T Consensus 65 g~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~-~~~~~~L~~GRvlgGiaTSLLfS~FE 143 (354)
T PF05631_consen 65 GFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKH-SSNYPVLLLGRVLGGIATSLLFSAFE 143 (354)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 47777777788888888888889999999999999998888888888776543 45677777777888888887777654
Q ss_pred ecc-c----cccCcchhhHHHHHHHH-HHHHhHhHHHHHHHHHHhhcCc--hhHHHHHHHHHHHHHHHhhcccccccC
Q 010268 430 VYA-P----EIYPTSVRTTGVGVASS-IGRIGGMVCPLVAVALVHGCHQ--TAALILFELVILLSGISVLLFPFETTG 499 (514)
Q Consensus 430 ~~~-~----~~~p~~~~~~~~g~~~~-~~~~g~~~~p~i~g~l~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (514)
++. . +-+|++..+..++.... .+.+-.+.+..+.-.+.+..+. ..+|.....+.+++++++....+|..+
T Consensus 144 sW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg 221 (354)
T PF05631_consen 144 SWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYG 221 (354)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCC
Confidence 443 2 23465666666765553 3345556666666666776554 667777777777777766655555444
No 266
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.09 E-value=3.9e-05 Score=74.08 Aligned_cols=107 Identities=19% Similarity=0.295 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhh---------hHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCC---chhHHHHHHHHHH
Q 010268 95 KGFLITAIVTSAAGLLSAFAP---------NYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAP---NRGFWMVIFQTFW 161 (514)
Q Consensus 95 ~~l~~~~~~~~~~~~~~~~~~---------~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 161 (514)
|+++++.++..+|.+++.++. +.+.++++..+.++|.|.. +...++.+|.++++ +|...+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 578888899999988855442 2357888999999999999 99999999999765 5778889999999
Q ss_pred HHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHHHH
Q 010268 162 TVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLLYSV 201 (514)
Q Consensus 162 ~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 201 (514)
++|..+++.+.+++-++.||...|.+.++..+++++.+..
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999888877666544
No 267
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.09 E-value=5.2e-05 Score=77.61 Aligned_cols=142 Identities=12% Similarity=0.045 Sum_probs=103.8
Q ss_pred CcccCcccchhhhhhchhhHHHHHHHHHHH-HhhHHHHHHHHHHHHHHhhhhhcccC--------cchhHHHHHHHHhhh
Q 010268 351 KSRDINYGDVFITSFAEFPGLLLAAAMVDR-LGRKLSMSSMFFCCCIFLVPLLFQQP--------KGLTTGLLFGARICI 421 (514)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~g~~~ 421 (514)
.+...+......+....-+..+++|+++|+ +|+++.+.++.++..++.+++..... ....++.+.+..++.
T Consensus 20 ~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~ 99 (654)
T TIGR00926 20 FSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGT 99 (654)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhc
Confidence 555555555566666667777888999997 69999999888888877766654321 122445566777888
Q ss_pred cccccceeeccccccCcc---hhhHHHHHHHHHHHHhHhHHHHHHHHHHhhc-------CchhHHHHHHHHHHHHHHHhh
Q 010268 422 TVTFTVVYVYAPEIYPTS---VRTTGVGVASSIGRIGGMVCPLVAVALVHGC-------HQTAALILFELVILLSGISVL 491 (514)
Q Consensus 422 ~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~-------g~~~~~~~~~~~~~~~~~~~~ 491 (514)
++.-|...+...|.++++ .+-..+.+.....++|+.+++.+.+++.+.. +|...|.+.+++++++.++..
T Consensus 100 GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 100 GGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFM 179 (654)
T ss_pred cccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHH
Confidence 888899999999888753 3677888888889999999999999987543 466677777776666665554
Q ss_pred c
Q 010268 492 L 492 (514)
Q Consensus 492 ~ 492 (514)
.
T Consensus 180 ~ 180 (654)
T TIGR00926 180 A 180 (654)
T ss_pred H
Confidence 3
No 268
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.85 E-value=0.002 Score=60.69 Aligned_cols=62 Identities=15% Similarity=0.127 Sum_probs=41.5
Q ss_pred ccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHH
Q 010268 404 QQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVAL 466 (514)
Q Consensus 404 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l 466 (514)
..+.++.+....+.|+..|-..++.+.+..+.+|++++-.+ |....+.-.++.....+.+++
T Consensus 340 ~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~a-G~~m~~fl~~Gl~~G~~~s~l 401 (406)
T KOG1479|consen 340 FESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAA-GNLMVFFLVGGLALGSLLSWV 401 (406)
T ss_pred ecCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHH-HHHHHHHHHHHHHHhhHHHHH
Confidence 34567777888888899888888999999999987766544 444444444444434444443
No 269
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.74 E-value=0.001 Score=54.48 Aligned_cols=111 Identities=14% Similarity=0.049 Sum_probs=91.1
Q ss_pred cccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccc
Q 010268 356 NYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEI 435 (514)
Q Consensus 356 ~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 435 (514)
......+......+..++.+.+.+++|.|+.++++.++..+..+... .++.+.++....+.|++.+..+.....++.+.
T Consensus 39 G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~-~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 39 GYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFF-YPNSYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred cHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 34456666777888889999999999999999999998887666554 34567778888899999999999988999999
Q ss_pred cCcchhhHHHHHHHHHHHHhHhHHHHHHHHHH
Q 010268 436 YPTSVRTTGVGVASSIGRIGGMVCPLVAVALV 467 (514)
Q Consensus 436 ~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~ 467 (514)
..++.+++..|+...+...+.++|..+.-.+.
T Consensus 118 s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred CCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98899999999999988888888877665544
No 270
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.58 E-value=0.0013 Score=58.77 Aligned_cols=136 Identities=12% Similarity=0.044 Sum_probs=92.1
Q ss_pred hHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhHHHHHHhhc
Q 010268 66 ESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCLVGLGLGGGPVLASWFLEFI 145 (514)
Q Consensus 66 ~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~ 145 (514)
.|.+.-+-.+...+..+.+....||+-.-+=+.+..++.+.+..+.+++++.+.-+++..+..++.|..-+..--++..+
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~Y 143 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSRY 143 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhccC
Confidence 46677777888888889999999987544444555667788889999999999999999999998887644433333333
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc--ccchHHHHHHhHHHHHHHHHHHHHccCC
Q 010268 146 PAPNRGFWMVIFQTFWTVGTILEAGIAWLVMP--RLGWRWLLGLSAFPSSLLLLLYSVTPES 205 (514)
Q Consensus 146 ~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~--~~gw~~~f~~~~~~~~i~~~~~~~~~~~ 205 (514)
++ ...+.+..+.+.++++|..--.++.+ .++-|...++...+-++.+..++++-++
T Consensus 144 ~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~ 201 (409)
T KOG3880|consen 144 PS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKS 201 (409)
T ss_pred CC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCC
Confidence 33 23445556666666677654444544 3567888888777666665555554333
No 271
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.56 E-value=0.0022 Score=62.83 Aligned_cols=152 Identities=13% Similarity=0.041 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhH-HHHHHHHHHHHhhHHH
Q 010268 308 IKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPG-LLLAAAMVDRLGRKLS 386 (514)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~g~l~dr~g~~~~ 386 (514)
++.++...+.+++..+.|+..-..-..+.... .+.+.+...++.+...+...+. .++.+++++|++|++.
T Consensus 6 ~~k~~~~~l~fF~il~~Y~iLR~lKD~lvv~~---------~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~l 76 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTILRDTKDTLVVTA---------KGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEAL 76 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhheeecc---------cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHh
Confidence 35666777777777777776554444433110 0112233344444333433334 7788999999999987
Q ss_pred HHHHHHHHHHHhhhhhcc-----c--------------------------CcchhHHHHHHHHhhhccccc-ceeecccc
Q 010268 387 MSSMFFCCCIFLVPLLFQ-----Q--------------------------PKGLTTGLLFGARICITVTFT-VVYVYAPE 434 (514)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~-----~--------------------------~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~ 434 (514)
.-.........++++.+. + +.|...++.+..-+......+ ..|++.+|
T Consensus 77 f~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fand 156 (472)
T TIGR00769 77 FYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQ 156 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 766555444443333211 0 012222222333333334444 78999999
Q ss_pred ccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHh
Q 010268 435 IYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVH 468 (514)
Q Consensus 435 ~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~ 468 (514)
.+..++..+-+++....+++|..+++.+..++.+
T Consensus 157 i~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 157 ITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999888763
No 272
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.43 E-value=0.0013 Score=57.62 Aligned_cols=55 Identities=16% Similarity=0.295 Sum_probs=38.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHH---h--cccchHHHHHHhHHHHHHHHHHHHHc
Q 010268 148 PNRGFWMVIFQTFWTVGTILEAGIAWLV---M--PRLGWRWLLGLSAFPSSLLLLLYSVT 202 (514)
Q Consensus 148 ~~r~~~~~~~~~~~~~G~~~~~~i~~~l---~--~~~gw~~~f~~~~~~~~i~~~~~~~~ 202 (514)
++|+..+.+...++++|.++.-...-.- . -.-+|+..+.+.+++.++-++++.++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5677777778888888887764432221 1 12369999999998888877776655
No 273
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.33 E-value=0.0012 Score=62.60 Aligned_cols=168 Identities=13% Similarity=0.017 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCC-hHHHHHHHHHHHHHHHHHh-h
Q 010268 36 MGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGR-RKGFLITAIVTSAAGLLSA-F 113 (514)
Q Consensus 36 l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~-r~~l~~~~~~~~~~~~~~~-~ 113 (514)
+++.........+..++....+.-|.+....|++.....++..+++.+.|.++||... |.++++......++..... +
T Consensus 273 ~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~ 352 (480)
T KOG2563|consen 273 ICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTC 352 (480)
T ss_pred HHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444444455555554555667888899999999999999999999999999865 5666665555555532221 1
Q ss_pred h---hhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccc---hHH-HH
Q 010268 114 A---PNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLG---WRW-LL 185 (514)
Q Consensus 114 ~---~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~g---w~~-~f 185 (514)
. .+.+.++....+.|.+.... |...-+-.|...|..-+.-.|+.....++=+++-..+-+.+.+..+ |.. .-
T Consensus 353 t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (480)
T KOG2563|consen 353 TLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPAN 432 (480)
T ss_pred hccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccch
Confidence 1 12344555566667665555 7666777787766666777788777766666666666666666555 333 33
Q ss_pred HHhHHHHHHHHHHHHHcc
Q 010268 186 GLSAFPSSLLLLLYSVTP 203 (514)
Q Consensus 186 ~~~~~~~~i~~~~~~~~~ 203 (514)
+......++.+++..+++
T Consensus 433 i~~~~~~~l~~~lva~~r 450 (480)
T KOG2563|consen 433 IFLTVSALLGAILVAFFR 450 (480)
T ss_pred hHhHHHHHHHHHHHhhhh
Confidence 333444444444443443
No 274
>PRK03612 spermidine synthase; Provisional
Probab=97.16 E-value=0.048 Score=54.83 Aligned_cols=137 Identities=19% Similarity=0.136 Sum_probs=80.6
Q ss_pred hhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHH---HHHHHHHhhhh----hH-HHHHHHHHHHh
Q 010268 57 SLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVT---SAAGLLSAFAP----NY-YLLLFFRCLVG 128 (514)
Q Consensus 57 ~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~---~~~~~~~~~~~----~~-~~l~~~r~l~G 128 (514)
--+|-+....+.+.+++.+|..+|+.++|++.++--++.. .+-+.+. .++..+..... .. ..++...++.+
T Consensus 43 ~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 121 (521)
T PRK03612 43 YLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIG 121 (521)
T ss_pred HHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3468888899999999999999999999988744333322 1111111 11111111111 11 12233445566
Q ss_pred hhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHH-hcccchHHHHHHhHHHHHHH
Q 010268 129 LGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLV-MPRLGWRWLLGLSAFPSSLL 195 (514)
Q Consensus 129 ~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l-~~~~gw~~~f~~~~~~~~i~ 195 (514)
+..|+. |....+..+. ..++-++..|-......+|.++|.++.+++ ...+|-....++.+.+.++.
T Consensus 122 ~l~G~~~Pl~~~~~~~~-~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~ 189 (521)
T PRK03612 122 LLIGMEIPLLMRILQRI-RDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLA 189 (521)
T ss_pred HHHHHHHHHHHHHHHhc-cccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 666666 5554444332 222456778888888999999999887764 45677655555555444443
No 275
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.11 E-value=0.022 Score=55.26 Aligned_cols=145 Identities=16% Similarity=0.103 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHH
Q 010268 30 VLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGL 109 (514)
Q Consensus 30 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~ 109 (514)
-.+...++..+-++....++.....+...-|+|+..+|..-+...+....+.+...++.+|+|..|.=+++.....+...
T Consensus 259 ~vflas~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~ 338 (432)
T PF06963_consen 259 PVFLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLA 338 (432)
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHH
Confidence 34445555555555555556666666677799999999999999999999999999999999998887777665544433
Q ss_pred HHh---hhh-------hHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 010268 110 LSA---FAP-------NYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWL 174 (514)
Q Consensus 110 ~~~---~~~-------~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~ 174 (514)
+.. +.+ +...++.+-++.=+|-=.+ ....-++.|..|+++||...|...+..++-.++...++-.
T Consensus 339 ~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii 414 (432)
T PF06963_consen 339 LCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTII 414 (432)
T ss_pred HHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 332 221 2223333333333333234 3444677899999999999999999988888777666543
No 276
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.03 E-value=0.0037 Score=61.49 Aligned_cols=146 Identities=18% Similarity=0.195 Sum_probs=105.0
Q ss_pred CCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHh-hh---------hhHHHHHHHHHHHhhh
Q 010268 61 LSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSA-FA---------PNYYLLLFFRCLVGLG 130 (514)
Q Consensus 61 ~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~-~~---------~~~~~l~~~r~l~G~~ 130 (514)
.|+...|.+..+..++..++..+..+..-+..-|+++..+.++.++..+.-. +. ++.+..+.--++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 8899999999889999999999998888888889998888777666554322 11 1222222234444444
Q ss_pred ccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccch--------HHHHHHhHHHHHHHHHHHHH
Q 010268 131 LGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGW--------RWLLGLSAFPSSLLLLLYSV 201 (514)
Q Consensus 131 ~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw--------~~~f~~~~~~~~i~~~~~~~ 201 (514)
.+.. .+...++++.+|+...|...++..+..++|..++..++..+.+.++. ....++..+..++.+.+..+
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~l 411 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFL 411 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 4444 44446789999999999999999999999999999999988775542 23444555555555666667
Q ss_pred ccCCh
Q 010268 202 TPESP 206 (514)
Q Consensus 202 ~~~~~ 206 (514)
+|++.
T Consensus 412 Lp~~~ 416 (433)
T PF03092_consen 412 LPPQK 416 (433)
T ss_pred cCCCc
Confidence 77654
No 277
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.03 E-value=0.00013 Score=73.26 Aligned_cols=147 Identities=12% Similarity=0.021 Sum_probs=2.6
Q ss_pred CCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhccc------------------------
Q 010268 350 GKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQ------------------------ 405 (514)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~------------------------ 405 (514)
+++..+.+++.+.+-++.++..++..++..|-.|-+.+..+.++.+++.+++...+
T Consensus 34 ~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~ 113 (539)
T PF03137_consen 34 GLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNL 113 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccccccccc
Confidence 38888899999999999999999999999998888888888888887766554100
Q ss_pred --------------------------CcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHH
Q 010268 406 --------------------------PKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVC 459 (514)
Q Consensus 406 --------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~ 459 (514)
..+.+++..++.|++....+++..+++-|.++++..+...|+......+|-++|
T Consensus 114 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~G 193 (539)
T PF03137_consen 114 CDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALG 193 (539)
T ss_dssp --------------------------------------SSS---------------------------------------
T ss_pred ccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHH
Confidence 013344556778888888899999999999999999999999999988888888
Q ss_pred HHHHHHHHhh---------------------cC-chhHHHHHHHHHHHHHHHhhccccc
Q 010268 460 PLVAVALVHG---------------------CH-QTAALILFELVILLSGISVLLFPFE 496 (514)
Q Consensus 460 p~i~g~l~~~---------------------~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (514)
=.+++..... .| |+..|++.+.+.++.++....+.++
T Consensus 194 f~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~ 252 (539)
T PF03137_consen 194 FLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKK 252 (539)
T ss_dssp -----------------------------------------------------------
T ss_pred HHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 7777766532 12 5555666777777666666665543
No 278
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.00 E-value=0.0024 Score=45.22 Aligned_cols=58 Identities=14% Similarity=-0.020 Sum_probs=45.8
Q ss_pred HHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHH
Q 010268 327 GLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCC 394 (514)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~ 394 (514)
...-+.+.+.++. |.++.+.+...++..+..+++.++.|+++||+++++........+
T Consensus 18 ~~~Pfl~~~~~~~----------Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 18 CLYPFLPLYLKQL----------GLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHhhhhHhhhhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 3444555555544 489999999999999999999999999999999888776655443
No 279
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.88 E-value=0.011 Score=60.21 Aligned_cols=148 Identities=12% Similarity=0.014 Sum_probs=113.8
Q ss_pred CcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcc--------------------c-----
Q 010268 351 KSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQ--------------------Q----- 405 (514)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--------------------~----- 405 (514)
.+....+++...+-++..+...+..++.-|..|-+.+.++.++++++.++..+. .
T Consensus 129 i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s 208 (735)
T KOG3626|consen 129 ISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLS 208 (735)
T ss_pred CCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccc
Confidence 777778888888899999999999999999988888888888887766654321 0
Q ss_pred ----------------------C----cc-hhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhH
Q 010268 406 ----------------------P----KG-LTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMV 458 (514)
Q Consensus 406 ----------------------~----~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 458 (514)
. ++ .+++..++.|++....++...+++-|.+.+++.....|+...+..+|-++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPai 288 (735)
T KOG3626|consen 209 FCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAI 288 (735)
T ss_pred hhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHH
Confidence 0 11 33445678888888899999999999999999999999999999888888
Q ss_pred HHHHHHHHHhhc------------------C-chhHHHHHHHHHHHHHHHhhccccccc
Q 010268 459 CPLVAVALVHGC------------------H-QTAALILFELVILLSGISVLLFPFETT 498 (514)
Q Consensus 459 ~p~i~g~l~~~~------------------g-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (514)
|=++++++...+ | |+..|++.+.+.++.++..+++.++.+
T Consensus 289 GfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 289 GFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred HHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCc
Confidence 888888776421 1 455677777777777777776654433
No 280
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.78 E-value=0.013 Score=54.53 Aligned_cols=114 Identities=20% Similarity=0.136 Sum_probs=83.0
Q ss_pred cccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccC--cchhHHHHHHHHhhhcccccceeeccc
Q 010268 356 NYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQP--KGLTTGLLFGARICITVTFTVVYVYAP 433 (514)
Q Consensus 356 ~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~ 433 (514)
.+.......+...++.++.|.+.||.|||+.+..+........+...+..+ .+.........|++.+...+...++..
T Consensus 41 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 120 (338)
T COG0477 41 YGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLS 120 (338)
T ss_pred HHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 466677777888888899999999999997777666543333333333333 344444445567777778888999999
Q ss_pred cccCc-chhhHHHHHHHH-HHHHhHhHHHHHHHHHHhh
Q 010268 434 EIYPT-SVRTTGVGVASS-IGRIGGMVCPLVAVALVHG 469 (514)
Q Consensus 434 ~~~p~-~~~~~~~g~~~~-~~~~g~~~~p~i~g~l~~~ 469 (514)
|..|. +.++...+.... ...++..++|.+.+.+...
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 121 EWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99987 678888888888 5778888888877777665
No 281
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.71 E-value=0.049 Score=52.11 Aligned_cols=103 Identities=16% Similarity=0.077 Sum_probs=80.0
Q ss_pred chhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHH
Q 010268 366 AEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGV 445 (514)
Q Consensus 366 ~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~ 445 (514)
..++..+....+.|.++.|++++.+.+...+...++.+..+...+-+.-++.|..... -...++++-..+|+++--++.
T Consensus 53 Syl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vt 131 (412)
T PF01770_consen 53 SYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVT 131 (412)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHH
Confidence 3445566778899999999999999999888888888888887777777777776554 344556666667778777888
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHhh
Q 010268 446 GVASSIGRIGGMVCPLVAVALVHG 469 (514)
Q Consensus 446 g~~~~~~~~g~~~~p~i~g~l~~~ 469 (514)
+......-+|.+++..++-.+...
T Consensus 132 s~~raa~l~g~~~s~~lgQllvs~ 155 (412)
T PF01770_consen 132 SYTRAATLVGRFISSLLGQLLVSF 155 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888888888888888887766663
No 282
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.71 E-value=0.054 Score=51.76 Aligned_cols=109 Identities=14% Similarity=0.162 Sum_probs=73.7
Q ss_pred cchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHH--HHHHH---HHHhhhhhHHHHHHHHHHHhhhccch-hh
Q 010268 63 PNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIV--TSAAG---LLSAFAPNYYLLLFFRCLVGLGLGGG-PV 136 (514)
Q Consensus 63 ~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~--~~~~~---~~~~~~~~~~~l~~~r~l~G~~~g~~-~~ 136 (514)
..+.-+-...|.+|..++.--...+ |+ |+..+.+.+- ..+.. ...-+.++.|..++..+..|+..|.. .-
T Consensus 280 r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVN 355 (402)
T PF02487_consen 280 RDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVN 355 (402)
T ss_pred HHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHH
Confidence 4555666667777666654332221 33 4443333222 22222 22335678898989999999988887 44
Q ss_pred HHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010268 137 LASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLV 175 (514)
Q Consensus 137 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l 175 (514)
....+.|..++++|..++|....+-++|.+++..++-.+
T Consensus 356 tF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 356 TFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 556778888999999999999999999999998887665
No 283
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.52 E-value=0.012 Score=56.88 Aligned_cols=110 Identities=13% Similarity=-0.053 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHhhhhhc--c-cC------cchhHHHHHHHHhhhcccccceeeccccccCcc---hhhHHHHHHHHHH
Q 010268 385 LSMSSMFFCCCIFLVPLLF--Q-QP------KGLTTGLLFGARICITVTFTVVYVYAPEIYPTS---VRTTGVGVASSIG 452 (514)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~--~-~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~~ 452 (514)
+++..+.++..++.+++.. . .. ...+++.+.+.+++.|+.=|...++..|.++++ .+.+.+.......
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 3455666666666555331 1 11 246677788889999999999999999998765 4677888888999
Q ss_pred HHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHhhccc
Q 010268 453 RIGGMVCPLVAVALVHGCHQTAALILFELVILLSGISVLLFP 494 (514)
Q Consensus 453 ~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 494 (514)
++|..+++.+.+++.++.||...|.+.++..+++.+..+.-.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~ 123 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGR 123 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999888888887777665543
No 284
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.45 E-value=0.32 Score=47.48 Aligned_cols=133 Identities=19% Similarity=0.269 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHHHHh---hhhcCCCcchh-HHHHHHHHHHHHHhhhhHHhhhh---hhCChHHHHHHHHHHHHHHHH
Q 010268 38 WISEAMEMMLLSFVGPAV---QSLWHLSPNQE-SLITSVVFAGMLVGAYSWGIVSD---NFGRRKGFLITAIVTSAAGLL 110 (514)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~---~~~~~~s~~~~-g~i~s~~~~~~~i~~~~~G~l~D---r~G~r~~l~~~~~~~~~~~~~ 110 (514)
++..+.....+....|.- ....+.+.... ++-.-...++..++..+.+.+.+ |+||++.+.++..+..++.++
T Consensus 249 f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~l 328 (461)
T KOG3098|consen 249 FFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLL 328 (461)
T ss_pred HHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHH
Confidence 344444444444444432 22333333332 33333344455556666666665 578999999998888887777
Q ss_pred Hhhh------------------hhHHHHHHHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHH
Q 010268 111 SAFA------------------PNYYLLLFFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGI 171 (514)
Q Consensus 111 ~~~~------------------~~~~~l~~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i 171 (514)
.... +++...++..++.|++.+.. ...+.++.... +++|..+.++...-..++..++-..
T Consensus 329 i~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~ 407 (461)
T KOG3098|consen 329 IHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFF 407 (461)
T ss_pred HhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhh
Confidence 6432 24556777788999999888 66667777777 6788888888777777666654443
No 285
>PRK03612 spermidine synthase; Provisional
Probab=96.24 E-value=0.068 Score=53.77 Aligned_cols=136 Identities=15% Similarity=0.046 Sum_probs=74.4
Q ss_pred cccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHH-HHHH-HHHHh-hhhh---cccCc-chhHHHHHHHHhhhccc
Q 010268 352 SRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSS-MFFC-CCIFL-VPLL---FQQPK-GLTTGLLFGARICITVT 424 (514)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~-~~~~-~~~~~-~~~~---~~~~~-~~~~~~~~~~g~~~~~~ 424 (514)
+....+...+++.++..+|+.+++++.++.-++....- +..+ .+++. +... +.... .......++.++..|+.
T Consensus 48 s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 127 (521)
T PRK03612 48 SVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGME 127 (521)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334666677777777888777776644333322111 1111 11111 1111 11111 12233344556777777
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHh-hcCchhHHHHHHHHHHHHHH
Q 010268 425 FTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVH-GCHQTAALILFELVILLSGI 488 (514)
Q Consensus 425 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~-~~g~~~~~~~~~~~~~~~~~ 488 (514)
+|...-+..+.. .+..+...|-......+|+++|+++.+++.- ..|.....++.+.+.+++++
T Consensus 128 ~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 128 IPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred HHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 776665554432 2235677888888899999999999998764 67766565555555544443
No 286
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=96.11 E-value=0.0011 Score=61.88 Aligned_cols=104 Identities=13% Similarity=0.079 Sum_probs=3.5
Q ss_pred cchhhhhhchhhHHHHHHHHHHHH-hhHHHHHHHHHHHHHHh---hhh----------hcccCcchhHHHHHHHHhhhcc
Q 010268 358 GDVFITSFAEFPGLLLAAAMVDRL-GRKLSMSSMFFCCCIFL---VPL----------LFQQPKGLTTGLLFGARICITV 423 (514)
Q Consensus 358 ~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~---~~~----------~~~~~~~~~~~~~~~~g~~~~~ 423 (514)
..+.++.++..+|+.+.++..-+. ++|++.. ..+.-.+.. +.. ...++.+..++..++.|+..|-
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~-~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWI-LSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHH-HHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 456688999999999888753221 2333332 222222111 111 0123445666777888888888
Q ss_pred cccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHH
Q 010268 424 TFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLV 462 (514)
Q Consensus 424 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i 462 (514)
..+..+.+..+.+++++|..+-.+...+-.+|-.+|..+
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp --HHHH---------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888899999988887766666665555666655554
No 287
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=95.86 E-value=0.091 Score=48.77 Aligned_cols=163 Identities=11% Similarity=0.023 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC-cchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHH
Q 010268 32 AYAGMGWISEAMEMMLLSFVGPAVQSLWHLS-PNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLL 110 (514)
Q Consensus 32 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~ 110 (514)
+.+.++++.......++.+....++.+++-+ ....+.-..+-.....+..++.|...|+..|+|++...+.+.-++...
T Consensus 30 i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~v 109 (503)
T KOG2601|consen 30 IFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIV 109 (503)
T ss_pred ehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHH
Confidence 4556777877777778888877777777653 333333333444556778889999999999999988776655443332
Q ss_pred H------hhhh------hHHHHHHHHHHHhhhccch---hhHHHHH--Hhhc----CCCchhHHH---HHHHHHHHHHHH
Q 010268 111 S------AFAP------NYYLLLFFRCLVGLGLGGG---PVLASWF--LEFI----PAPNRGFWM---VIFQTFWTVGTI 166 (514)
Q Consensus 111 ~------~~~~------~~~~l~~~r~l~G~~~g~~---~~~~~~i--~~~~----~~~~r~~~~---~~~~~~~~~G~~ 166 (514)
. .+.. ++..+..+.++.-...+.. ..+..++ .||. ..+.+.... +.....-..-.+
T Consensus 110 agglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~ 189 (503)
T KOG2601|consen 110 AGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNL 189 (503)
T ss_pred HHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhc
Confidence 2 2221 3444444433333222211 1111111 2332 344455444 444445555678
Q ss_pred HHHHHHHHHhcccchHHHHHHhHHHHHH
Q 010268 167 LEAGIAWLVMPRLGWRWLLGLSAFPSSL 194 (514)
Q Consensus 167 ~~~~i~~~l~~~~gw~~~f~~~~~~~~i 194 (514)
+.|.+.|.+....+-|..-...++-.++
T Consensus 190 Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 190 LAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred hhhhhhcccceeechhhhhhhhHHHHHH
Confidence 8999999998888888755555554444
No 288
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.84 E-value=0.023 Score=40.70 Aligned_cols=76 Identities=9% Similarity=-0.001 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhc
Q 010268 324 SYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLF 403 (514)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 403 (514)
.-+.+.-.+|.+.++.+ ++..+++++.+...++.++|.+...++.++.++++.+..+.+.+.+..+.+.+
T Consensus 7 gRFayTplLP~M~~~~~----------ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~ 76 (85)
T PF06779_consen 7 GRFAYTPLLPLMQADGG----------LSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMAL 76 (85)
T ss_pred HHHHHHhHhHHHHHhcC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 33445556777776554 89999999999999999999999999999988889999999999888888887
Q ss_pred ccCcch
Q 010268 404 QQPKGL 409 (514)
Q Consensus 404 ~~~~~~ 409 (514)
..+.+.
T Consensus 77 ~~~~~~ 82 (85)
T PF06779_consen 77 THSFWL 82 (85)
T ss_pred HhchHH
Confidence 766543
No 289
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=95.76 E-value=0.14 Score=50.67 Aligned_cols=153 Identities=16% Similarity=0.061 Sum_probs=88.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhh-hhhchhhHHHHHHHHHHHHhh
Q 010268 305 PELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFI-TSFAEFPGLLLAAAMVDRLGR 383 (514)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~g~l~dr~g~ 383 (514)
+.-++.++.+.+++++..+.|...-..-..+.... .+++....+=.. ..-+.++...+..++.+++++
T Consensus 20 ~~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~-----------~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~ 88 (491)
T PF03219_consen 20 RSELKKFLPLALMFFFILFNYTILRDLKDTLVVTA-----------QGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSR 88 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEec-----------CChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence 45566777777777777777665443333322110 122222222111 112344555667888999999
Q ss_pred HHHHHHHHHHHHHHhhhhhc---------ccC----------------------cchhHHHHHHHHhhhccccc-ceeec
Q 010268 384 KLSMSSMFFCCCIFLVPLLF---------QQP----------------------KGLTTGLLFGARICITVTFT-VVYVY 431 (514)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~---------~~~----------------------~~~~~~~~~~~g~~~~~~~~-~~~~~ 431 (514)
.++.-+........+.++.+ .++ .|...+..+..-+......+ ..|.+
T Consensus 89 ~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~f 168 (491)
T PF03219_consen 89 EKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGF 168 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88765544433333322221 111 11111111111122222233 56999
Q ss_pred cccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHh
Q 010268 432 APEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVH 468 (514)
Q Consensus 432 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~ 468 (514)
.+|.++.++..+.+++....+++|.++++.+...+.+
T Consensus 169 AN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 169 ANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999888877
No 290
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=95.29 E-value=2.4 Score=39.11 Aligned_cols=69 Identities=9% Similarity=0.172 Sum_probs=47.8
Q ss_pred HHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHH
Q 010268 73 VFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFL 142 (514)
Q Consensus 73 ~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~ 142 (514)
..+....++.+.+.+..++|-|.++.++......... .=+-+.+..++-.-...|++.+.. ..-.+|++
T Consensus 67 ~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA-~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT 136 (390)
T KOG3097|consen 67 LYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA-ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLT 136 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hhcchhHHhhccHHHhhccccccccccCcceec
Confidence 3445566777777999999999999988776543222 223466788888999999998876 33234443
No 291
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=94.45 E-value=0.76 Score=46.77 Aligned_cols=139 Identities=13% Similarity=0.056 Sum_probs=94.1
Q ss_pred cCcccchhhhhhchhhHHHHHHHHHHHH-hhHHHHHHHHHHHHHHhhhhhcc-------c-------------Cc-----
Q 010268 354 DINYGDVFITSFAEFPGLLLAAAMVDRL-GRKLSMSSMFFCCCIFLVPLLFQ-------Q-------------PK----- 407 (514)
Q Consensus 354 ~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~-------~-------------~~----- 407 (514)
..+.-.............+++++++|-+ ||-+++.++.++..+++.++... + ..
T Consensus 73 ~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~ 152 (571)
T KOG1237|consen 73 GGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQL 152 (571)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHH
Confidence 3344455555556666778899999985 78888888777776665443210 0 00
Q ss_pred chhHHHHHHHHhhhcccccceeeccccccC---cc-h--hhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHH
Q 010268 408 GLTTGLLFGARICITVTFTVVYVYAPEIYP---TS-V--RTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFEL 481 (514)
Q Consensus 408 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p---~~-~--~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~ 481 (514)
..+...+.+..++.++.-|...++-+|-++ ++ . +..-+.......+.|..++-.+.-++-+..+|...+.+..+
T Consensus 153 ~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~ 232 (571)
T KOG1237|consen 153 AVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTV 232 (571)
T ss_pred HHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHH
Confidence 133344555556778888999999998887 22 2 23566777777788888888888888788888888887777
Q ss_pred HHHHHHHHhhc
Q 010268 482 VILLSGISVLL 492 (514)
Q Consensus 482 ~~~~~~~~~~~ 492 (514)
+.+++.++...
T Consensus 233 ~~~lai~iF~~ 243 (571)
T KOG1237|consen 233 LNALAILIFLP 243 (571)
T ss_pred HHHHHHHHHHc
Confidence 77666655543
No 292
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=94.38 E-value=0.48 Score=46.56 Aligned_cols=109 Identities=15% Similarity=0.060 Sum_probs=71.2
Q ss_pred hHHHHHHHHHHHHHhhhhHHhhhhhhCCh-HHHHHHHHHHHHHH---HHHh---------hhhhHHHHHHHHHHHhhhcc
Q 010268 66 ESLITSVVFAGMLVGAYSWGIVSDNFGRR-KGFLITAIVTSAAG---LLSA---------FAPNYYLLLFFRCLVGLGLG 132 (514)
Q Consensus 66 ~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r-~~l~~~~~~~~~~~---~~~~---------~~~~~~~l~~~r~l~G~~~g 132 (514)
.-++...+.++-.+|..+..+.. .-++| +.+.+..++-.+.. +++. +-++-+..++..++.|+..|
T Consensus 309 ~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 34566677777777777554331 11222 13333333333322 2222 22455667778999999999
Q ss_pred ch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010268 133 GG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLV 175 (514)
Q Consensus 133 ~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l 175 (514)
-. ..+..+..+..++++|..+-.+...+..+|..+|..++..+
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88 66667777888889999999999999999999988876543
No 293
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=94.37 E-value=0.04 Score=52.62 Aligned_cols=145 Identities=11% Similarity=0.029 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHH----HhhHH
Q 010268 310 STLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDR----LGRKL 385 (514)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr----~g~~~ 385 (514)
..+......+...+.+..-..+.+.+.... |.+....+......-+.+.+-.++.|..+|| +|||+
T Consensus 33 ~li~v~~ia~Gvqf~wA~elsy~tPyl~~l----------Gvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRR 102 (498)
T KOG0637|consen 33 KLISVASIAAGVQFGWALELSYLTPYLQSL----------GVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRR 102 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHHc----------CCCcccccccccccccccceeccccccccccccccccccc
Confidence 334444444444444444444455444433 3777777788888888899999999999997 67777
Q ss_pred HHHH-HHHHHHHHhhhhhcc--------cCc----chhHHHHHHH-----HhhhcccccceeeccccccCcchhhH-HHH
Q 010268 386 SMSS-MFFCCCIFLVPLLFQ--------QPK----GLTTGLLFGA-----RICITVTFTVVYVYAPEIYPTSVRTT-GVG 446 (514)
Q Consensus 386 ~~~~-~~~~~~~~~~~~~~~--------~~~----~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~~p~~~~~~-~~g 446 (514)
..+. +.....+.+.++.+. ++. ....+..++. =++........-++..++..++++.+ +++
T Consensus 103 PfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans 182 (498)
T KOG0637|consen 103 PFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANS 182 (498)
T ss_pred chHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccch
Confidence 6554 444444555444322 111 1122222222 23444566777888889987777766 888
Q ss_pred HHHHHHHHhHhHHHHHHH
Q 010268 447 VASSIGRIGGMVCPLVAV 464 (514)
Q Consensus 447 ~~~~~~~~g~~~~p~i~g 464 (514)
....+..+|+.+|=.+.+
T Consensus 183 ~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 183 VFSFFMAVGNVLGYALGS 200 (498)
T ss_pred hHHHHHHhcceeeeeccc
Confidence 888888888887766655
No 294
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=94.09 E-value=1.7 Score=42.45 Aligned_cols=153 Identities=14% Similarity=0.028 Sum_probs=88.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhh-chhhHHHHHHHHHHHHhhH
Q 010268 306 ELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSF-AEFPGLLLAAAMVDRLGRK 384 (514)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~g~l~dr~g~~ 384 (514)
.-++.++.+.+.+++..+.|...-..-..+... ..+++.....-+..-+ ++++..++..++.+++.+.
T Consensus 24 ~E~~kflpl~Ll~f~I~~ny~~lR~lKDslvv~-----------~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~ 92 (509)
T COG3202 24 YELKKFLPLALLFFCILFNYNLLRSLKDSLVVT-----------RQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTRE 92 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhheEee-----------cCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHH
Confidence 345667777777777777766554444433311 1223233333333333 4556666777888888888
Q ss_pred HHHHHHHHHHHHHhhhhhc--c-------cC-----------c------------chhHHHHHHHHhhhccccc-ceeec
Q 010268 385 LSMSSMFFCCCIFLVPLLF--Q-------QP-----------K------------GLTTGLLFGARICITVTFT-VVYVY 431 (514)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~--~-------~~-----------~------------~~~~~~~~~~g~~~~~~~~-~~~~~ 431 (514)
++.-+........++++++ . ++ + |.......+.-+-.....+ ..+..
T Consensus 93 ~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~f 172 (509)
T COG3202 93 KVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQF 172 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7665444333333322221 0 00 1 2212222222122222223 66889
Q ss_pred cccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhh
Q 010268 432 APEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHG 469 (514)
Q Consensus 432 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~ 469 (514)
.+|+...++..+-+++.+...+++..++..+..++..+
T Consensus 173 aNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 173 ANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred HHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999988888887663
No 295
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=90.50 E-value=15 Score=34.35 Aligned_cols=120 Identities=23% Similarity=0.200 Sum_probs=70.3
Q ss_pred cCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHH----HHHHHHHHHHHHHH-hhh----hhHHHHHHHHHHHhh
Q 010268 59 WHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGF----LITAIVTSAAGLLS-AFA----PNYYLLLFFRCLVGL 129 (514)
Q Consensus 59 ~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l----~~~~~~~~~~~~~~-~~~----~~~~~l~~~r~l~G~ 129 (514)
+|-...|.+++.+.+...+.+++...-++.|.--.-+.+ ++|++...-..++. .|+ ++-+.+++.-++.|.
T Consensus 38 lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~ 117 (508)
T COG4262 38 LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGV 117 (508)
T ss_pred cCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 466778899999999999999999988888753322222 22222211111111 233 466788888999999
Q ss_pred hccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHH-hcccc
Q 010268 130 GLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLV-MPRLG 180 (514)
Q Consensus 130 ~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l-~~~~g 180 (514)
-.|.. |..+.++.... .+.....+.....-.+|.+.+.++-.++ ....|
T Consensus 118 LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~lllP~LG 168 (508)
T COG4262 118 LVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLLLPRLG 168 (508)
T ss_pred HHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhhc
Confidence 99987 87777765522 1111122222233556666665554443 33445
No 296
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=89.62 E-value=6.2 Score=35.38 Aligned_cols=129 Identities=18% Similarity=0.152 Sum_probs=79.6
Q ss_pred hHHHHHHHHHHHHHhhhhHHhhhhhhCCh--HHHHHHHHHHHHHHHHHhh----hhh---HHHHHHHHHHHhhhccch-h
Q 010268 66 ESLITSVVFAGMLVGAYSWGIVSDNFGRR--KGFLITAIVTSAAGLLSAF----APN---YYLLLFFRCLVGLGLGGG-P 135 (514)
Q Consensus 66 ~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r--~~l~~~~~~~~~~~~~~~~----~~~---~~~l~~~r~l~G~~~g~~-~ 135 (514)
.|.+.+.+++..++++-+..++..|-..| ..+.+..++.+....+... +|+ ...-+++-++.-.+.|.+ |
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 48999999999999999999988875554 3455555544444333222 221 112233333444556777 7
Q ss_pred hHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHH--hc--ccchHHHHHHhHHHHHHHHHH
Q 010268 136 VLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLV--MP--RLGWRWLLGLSAFPSSLLLLL 198 (514)
Q Consensus 136 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l--~~--~~gw~~~f~~~~~~~~i~~~~ 198 (514)
....+=.+..|++.|...+.++..-.++=.-++ .+- .+ ..+-|..|-++.+...+..+.
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClv----Lynlh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLV----LYNLHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhh----heecccccCccccchhhhhhHHHHHHHHHH
Confidence 777777888999999999988766544322211 111 11 235678888888777666444
No 297
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=87.80 E-value=4.4 Score=38.38 Aligned_cols=78 Identities=28% Similarity=0.300 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhH--HHHHHHHHH-----HH
Q 010268 309 KSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPG--LLLAAAMVD-----RL 381 (514)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~g~l~d-----r~ 381 (514)
+.++.+.+.+..+.+.+-.. .-.|.+++..+ .+-...+ .+.+..-+- -++...++| |+
T Consensus 31 ~~illLl~LYllQGiP~GL~-~~iP~lL~ak~----------vSyt~~a----~fS~ay~P~sLKllWaPiVDs~y~k~~ 95 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLI-GAIPLLLQAKG----------VSYTSQA----IFSFAYWPFSLKLLWAPIVDSVYSKRF 95 (510)
T ss_pred hhHHHHHHHHHHcCCchhHh-hhhHHHhcCCC----------cchhhhh----hhhhhhhHHHHHHHHHhhhHHHHHHhh
Confidence 44555556666666554433 36777775332 2222222 222222222 345666777 99
Q ss_pred hhHHHHHH-HHHHHHHHhhhh
Q 010268 382 GRKLSMSS-MFFCCCIFLVPL 401 (514)
Q Consensus 382 g~~~~~~~-~~~~~~~~~~~~ 401 (514)
|||+..++ +..+.+..+..+
T Consensus 96 GrrksWvvp~q~llG~~mllL 116 (510)
T KOG3574|consen 96 GRRKSWVVPCQYLLGLFMLLL 116 (510)
T ss_pred ccccceeeehHHHHHHHHHHH
Confidence 99876443 333333333333
No 298
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=86.67 E-value=19 Score=33.48 Aligned_cols=136 Identities=14% Similarity=0.103 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccchhhhhhchhhHHHHHHHHHHHHhhHHHH
Q 010268 308 IKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGDVFITSFAEFPGLLLAAAMVDRLGRKLSM 387 (514)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~ 387 (514)
.+.+++....+......|.+..........+.+ ..-.....+.-+..+++.+.+++++|-|+++
T Consensus 28 ~knv~i~s~~fl~~f~a~~gl~nlq~~vn~~lg----------------~~sl~~~y~~l~~s~m~~~~~Ir~~g~K~tm 91 (390)
T KOG3097|consen 28 LKNVLILSIAFLLTFTAYLGLQNLQTSVNYDLG----------------TVSLGALYLSLIDSSMFMPLLIRFLGTKWTM 91 (390)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcc----------------cchhhhhhHHHHHHHHHHHHHHHHHhhHHHH
Confidence 344555555555555555555554444332111 1112223344556667777999999999998
Q ss_pred HHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccC--cchh---------hHHHHHHHHHHHHhH
Q 010268 388 SSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYP--TSVR---------TTGVGVASSIGRIGG 456 (514)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p--~~~~---------~~~~g~~~~~~~~g~ 456 (514)
.++..........= ..+.+.-++....+.|++.+..+...-+++++.-. .+.| .+-+|...++..-+.
T Consensus 92 ~lav~~Y~lyiA~N-l~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~~q~~~~~~~~ffg~Ffii~~~~q 170 (390)
T KOG3097|consen 92 VLAVFPYALYIAAN-LEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRGEQAGDGMKVRFFGEFFIIFQCAQ 170 (390)
T ss_pred HHHHHHHHHHHHhh-cchhHHhhccHHHhhccccccccccCcceecHHHHHHHHhhhhhccCceeeeehhHHHHHHHHHH
Confidence 87776665443321 12223344556677777777777666666655432 1223 344555555554444
Q ss_pred hHHH
Q 010268 457 MVCP 460 (514)
Q Consensus 457 ~~~p 460 (514)
..|.
T Consensus 171 v~gn 174 (390)
T KOG3097|consen 171 VWGN 174 (390)
T ss_pred HHHH
Confidence 4443
No 299
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=85.79 E-value=3.8 Score=39.29 Aligned_cols=110 Identities=15% Similarity=0.097 Sum_probs=73.2
Q ss_pred cchhHHHHHH-HHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHh---------hhhhHHHHHHHHHHHhhhcc
Q 010268 63 PNQESLITSV-VFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSA---------FAPNYYLLLFFRCLVGLGLG 132 (514)
Q Consensus 63 ~~~~g~i~s~-~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~---------~~~~~~~l~~~r~l~G~~~g 132 (514)
....-++..+ +.+...+|.+.+.++-++ +||+. .+..++-.+..-++. +-.+-+.+++...+.|+..|
T Consensus 281 ~~y~~~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l-~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnG 358 (406)
T KOG1479|consen 281 DWYALLLVFLSFNVFDLIGSILAALLTWP-DPRKL-TIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNG 358 (406)
T ss_pred hhhHHHHHHHHhHHHHHhhhhhhhcccCC-CCcee-hHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccc
Confidence 3444555555 788888887777776665 33433 333333333222222 23456778888999999999
Q ss_pred ch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 010268 133 GG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWL 174 (514)
Q Consensus 133 ~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~ 174 (514)
-. .....+..+..+++++..+-.+.......|...|..++..
T Consensus 359 Yltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~l 401 (406)
T KOG1479|consen 359 YLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSWV 401 (406)
T ss_pred hHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 87 5555777788888888888888888888888888776544
No 300
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=80.59 E-value=10 Score=35.49 Aligned_cols=109 Identities=12% Similarity=0.044 Sum_probs=77.6
Q ss_pred hHHHHHHHHHHHHHhhhhHHhhhhhhCChH--HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccch-hhHHHHHH
Q 010268 66 ESLITSVVFAGMLVGAYSWGIVSDNFGRRK--GFLITAIVTSAAGLLSAFAPNYYLLLFFRCLVGLGLGGG-PVLASWFL 142 (514)
Q Consensus 66 ~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~--~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~-~~~~~~i~ 142 (514)
-|..-++..+..+++.+..|++--++.|+. .+.++....+...+++..+++.|..+++.++.+...... +++..-++
T Consensus 273 NG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA 352 (433)
T KOG3810|consen 273 NGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIA 352 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHH
Confidence 367778888888999999999998887763 344555555666667777888888888888777766666 66667778
Q ss_pred hhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 010268 143 EFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMP 177 (514)
Q Consensus 143 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~ 177 (514)
+....+.-|..+|++... +.++-.++.....+
T Consensus 353 ~nL~~e~~gLvFGiNTFv---Al~lQsilT~iVvd 384 (433)
T KOG3810|consen 353 RNLSSELFGLVFGINTFV---ALILQSILTLIVVD 384 (433)
T ss_pred HhhhhhhheeeeehHHHH---HHHHHHhheEEEEc
Confidence 777888888888886554 33444444433444
No 301
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=80.42 E-value=0.61 Score=43.64 Aligned_cols=107 Identities=10% Similarity=0.078 Sum_probs=2.7
Q ss_pred HHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHH--HHh-----------hhhhHHHHHHHHHHHhhhccch
Q 010268 68 LITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGL--LSA-----------FAPNYYLLLFFRCLVGLGLGGG 134 (514)
Q Consensus 68 ~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~--~~~-----------~~~~~~~l~~~r~l~G~~~g~~ 134 (514)
.+...+.++-.+|....++..=+-.+++.+.+..++-.+... +.. +.+|-+..++..++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 356678888888888777643211133333333333322221 111 1234566778899999999988
Q ss_pred -hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 010268 135 -PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWL 174 (514)
Q Consensus 135 -~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~ 174 (514)
..+..+..+..++++|..+-.+...+..+|..+|..++..
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp -HHHH------------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666788888889999998888888888888888776544
No 302
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=78.93 E-value=10 Score=34.93 Aligned_cols=133 Identities=11% Similarity=0.067 Sum_probs=70.5
Q ss_pred cchhhhhhchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhHHHHHHHHhhhcccccceeeccccccC
Q 010268 358 GDVFITSFAEFPGLLLAAAMVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICITVTFTVVYVYAPEIYP 437 (514)
Q Consensus 358 ~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p 437 (514)
.....-.+-.++-.+....+.||+.-..-..++.++.+.++.+..+.++.+.......+..++.|..-.....+. ..+|
T Consensus 66 ~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~ls-s~Y~ 144 (409)
T KOG3880|consen 66 AVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALS-SRYP 144 (409)
T ss_pred hhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhh-ccCC
Confidence 333334455556667778888887544445556667777777777777766655555555555444333333332 2333
Q ss_pred cchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhc--CchhHHHHHHHHHHHHHHHhhcccc
Q 010268 438 TSVRTTGVGVASSIGRIGGMVCPLVAVALVHGC--HQTAALILFELVILLSGISVLLFPF 495 (514)
Q Consensus 438 ~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~ 495 (514)
+. ..+-.+...+..+.+|..-...+.+.. ....+.++...+-++.++..++..+
T Consensus 145 ~~----~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~ 200 (409)
T KOG3880|consen 145 SI----VIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLK 200 (409)
T ss_pred Cc----eeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeC
Confidence 22 111122222333445555555555533 3455666666666555555444443
No 303
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=77.25 E-value=45 Score=31.42 Aligned_cols=80 Identities=9% Similarity=-0.018 Sum_probs=43.3
Q ss_pred CcchhHHHHHHHHhhhcccccceeeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHH-hhcCchhHHHHHHHHHH
Q 010268 406 PKGLTTGLLFGARICITVTFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALV-HGCHQTAALILFELVIL 484 (514)
Q Consensus 406 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~-~~~g~~~~~~~~~~~~~ 484 (514)
+.++++....++|...|.=.|..+.+..... .......+.....-++|+..+.++..++. -+.|....-...+.+.+
T Consensus 104 ~~~Vly~lt~vIG~LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl 181 (508)
T COG4262 104 SRLVLYALTAVIGVLVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNL 181 (508)
T ss_pred HHHHHHHHHHHHHHHHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHH
Confidence 4466777778888888888888877766622 11112222223335677777766666653 23343333333333333
Q ss_pred HHH
Q 010268 485 LSG 487 (514)
Q Consensus 485 ~~~ 487 (514)
+++
T Consensus 182 ~aA 184 (508)
T COG4262 182 AAA 184 (508)
T ss_pred HHH
Confidence 333
No 304
>PRK10263 DNA translocase FtsK; Provisional
Probab=76.14 E-value=43 Score=37.55 Aligned_cols=27 Identities=22% Similarity=0.281 Sum_probs=18.8
Q ss_pred hhhhchhhHHHHHHHHHHHHhhHHHHH
Q 010268 362 ITSFAEFPGLLLAAAMVDRLGRKLSMS 388 (514)
Q Consensus 362 ~~~~~~~~g~~~~g~l~dr~g~~~~~~ 388 (514)
+...++.+|..+...+..-+|.-..++
T Consensus 60 V~Nl~GiVGA~LAD~L~~LFGl~AYLL 86 (1355)
T PRK10263 60 IHNLGGMPGAWLADTLFFIFGVMAYTI 86 (1355)
T ss_pred cccccchHHHHHHHHHHHHHhHHHHHH
Confidence 456778888888887777778544433
No 305
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=76.12 E-value=26 Score=33.00 Aligned_cols=25 Identities=12% Similarity=0.181 Sum_probs=17.2
Q ss_pred HHHHhhHHHHHHHHHHHHHHhhhhh
Q 010268 378 VDRLGRKLSMSSMFFCCCIFLVPLL 402 (514)
Q Consensus 378 ~dr~g~~~~~~~~~~~~~~~~~~~~ 402 (514)
.||+...+++.+..-+.++.++.+.
T Consensus 208 ~e~ft~sKllav~~si~GViiVt~~ 232 (416)
T KOG2765|consen 208 VERFTLSKLLAVFVSIAGVIIVTMG 232 (416)
T ss_pred cchhhHHHHHHHHHhhccEEEEEec
Confidence 7999988888766665555544444
No 306
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=75.17 E-value=55 Score=28.43 Aligned_cols=45 Identities=18% Similarity=0.224 Sum_probs=22.7
Q ss_pred hhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Q 010268 143 EFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWLLGL 187 (514)
Q Consensus 143 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~~f~~ 187 (514)
+....+++.+.-.......-++..+|..++..+.+..+.+..+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~al~~~ 197 (209)
T PF06912_consen 153 RYLRGKDRALRRALRYLLIILSFFIGAILGALLYRRLGFWALLLP 197 (209)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 333334432333444445555566666666666666665433333
No 307
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=74.86 E-value=17 Score=27.16 Aligned_cols=36 Identities=22% Similarity=0.207 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHhhhhHHhhhhhh-CChHHHHHHHH
Q 010268 67 SLITSVVFAGMLVGAYSWGIVSDNF-GRRKGFLITAI 102 (514)
Q Consensus 67 g~i~s~~~~~~~i~~~~~G~l~Dr~-G~r~~l~~~~~ 102 (514)
++-.+.-+++..+.....|++.||| |.+++.++..+
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv~l 81 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFL 81 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 3444556666667778889999996 55665444433
No 308
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=73.48 E-value=35 Score=32.51 Aligned_cols=51 Identities=18% Similarity=0.131 Sum_probs=35.9
Q ss_pred CcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhHHHHHHHHHHHHH
Q 010268 437 PTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAALILFELVILLSG 487 (514)
Q Consensus 437 p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~~~~~~~~~~~~~ 487 (514)
+++......+.....-..-..+.|.+.|.+.+..+......++++..++..
T Consensus 169 s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~vsm 219 (503)
T KOG2601|consen 169 SPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALVSM 219 (503)
T ss_pred CHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHHHH
Confidence 334444455677777778899999999999998877766666666555543
No 309
>COG1288 Predicted membrane protein [Function unknown]
Probab=72.89 E-value=80 Score=30.69 Aligned_cols=24 Identities=13% Similarity=0.214 Sum_probs=16.0
Q ss_pred HhcccchHHHHHHhHHHHHHHHHH
Q 010268 175 VMPRLGWRWLLGLSAFPSSLLLLL 198 (514)
Q Consensus 175 l~~~~gw~~~f~~~~~~~~i~~~~ 198 (514)
+.+-.+||...++......+..+.
T Consensus 212 ~~sG~~~Riv~~v~~~~~~i~y~~ 235 (481)
T COG1288 212 FLSGMGLRIVVWVVFTLISIIYVY 235 (481)
T ss_pred ccccchHHHHHHHHHHHHHHHHHH
Confidence 345578999988877665554333
No 310
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=72.35 E-value=38 Score=30.45 Aligned_cols=65 Identities=15% Similarity=0.370 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHhhhhHHhhhhh-hCChHHHH----HHHHHHHHHHHHHh-hhh----hHHHHHHHHHHHhhhc
Q 010268 67 SLITSVVFAGMLVGAYSWGIVSDN-FGRRKGFL----ITAIVTSAAGLLSA-FAP----NYYLLLFFRCLVGLGL 131 (514)
Q Consensus 67 g~i~s~~~~~~~i~~~~~G~l~Dr-~G~r~~l~----~~~~~~~~~~~~~~-~~~----~~~~l~~~r~l~G~~~ 131 (514)
....-++..|..++.+..|+.... +.||+.+. .+.++..+..+..+ +.+ ++..+++.-++.|++.
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~ 218 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFL 218 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHH
Confidence 334445666667777778888774 44555443 22333334333321 111 3555777777777654
No 311
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=71.20 E-value=19 Score=26.91 Aligned_cols=52 Identities=21% Similarity=0.181 Sum_probs=34.4
Q ss_pred cchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhH--HHHHHHHHHHHHHH
Q 010268 438 TSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAA--LILFELVILLSGIS 489 (514)
Q Consensus 438 ~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~--~~~~~~~~~~~~~~ 489 (514)
++.++.+.++-...-.+++++-....|++.|++-...+ .+++.++.+.++++
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~l 90 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVL 90 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 35577888888888888888889999999998643323 33333344444433
No 312
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=69.69 E-value=83 Score=28.10 Aligned_cols=27 Identities=7% Similarity=-0.059 Sum_probs=16.4
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHh
Q 010268 372 LLAAAMVDRLGRKLSMSSMFFCCCIFL 398 (514)
Q Consensus 372 ~~~g~l~dr~g~~~~~~~~~~~~~~~~ 398 (514)
+.+-.++.|+.-|++.+.+.++..+..
T Consensus 258 igGk~lAskIS~rtVt~~ggi~Fi~Fg 284 (294)
T KOG2881|consen 258 IGGKYLASKISVRTVTLIGGILFIIFG 284 (294)
T ss_pred hhhHHHhhhheeEEEEEecchhHHHHH
Confidence 334456788887776666655554443
No 313
>PRK10263 DNA translocase FtsK; Provisional
Probab=69.60 E-value=63 Score=36.30 Aligned_cols=29 Identities=10% Similarity=-0.119 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHhcccchHHHHHHhHHH
Q 010268 163 VGTILEAGIAWLVMPRLGWRWLLGLSAFP 191 (514)
Q Consensus 163 ~G~~~~~~i~~~l~~~~gw~~~f~~~~~~ 191 (514)
.|+++|..++.++...+|.-...++..++
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~LILLll 170 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGTIALLCV 170 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 46666666666665555654444443333
No 314
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=66.58 E-value=14 Score=27.63 Aligned_cols=52 Identities=17% Similarity=0.185 Sum_probs=43.4
Q ss_pred chhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhh
Q 010268 64 NQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAP 115 (514)
Q Consensus 64 ~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~ 115 (514)
...|-+.++|.-.+.+.++.+++..|+.-+-+.=.+|..+..+|.....+.|
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 5678999999999999999999999999888887788777777776665543
No 315
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=64.42 E-value=1.4e+02 Score=28.83 Aligned_cols=17 Identities=18% Similarity=0.139 Sum_probs=9.1
Q ss_pred HHHHhhhhHHhhhhhhC
Q 010268 76 GMLVGAYSWGIVSDNFG 92 (514)
Q Consensus 76 ~~~i~~~~~G~l~Dr~G 92 (514)
...+.....|++..|+|
T Consensus 7 ~~i~~ii~~G~~~~~~~ 23 (385)
T PF03547_consen 7 LPIFLIILLGYLLGRFG 23 (385)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 33444555666666553
No 316
>PRK02237 hypothetical protein; Provisional
Probab=63.05 E-value=23 Score=26.61 Aligned_cols=52 Identities=15% Similarity=0.109 Sum_probs=42.8
Q ss_pred chhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhh
Q 010268 64 NQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAP 115 (514)
Q Consensus 64 ~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~ 115 (514)
+..|-+.++|.-.+.+.++.+++..|+.-+-+.=.+|..+..+|..+..+.|
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 4478999999999999999999999999887777777777777776665543
No 317
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=61.06 E-value=48 Score=33.00 Aligned_cols=60 Identities=8% Similarity=0.051 Sum_probs=41.6
Q ss_pred HHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Q 010268 124 RCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRW 183 (514)
Q Consensus 124 r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l~~~~gw~~ 183 (514)
-++.-+..-.. .+..+.-+.+.+|.--|+.|.+.++..++|+---..+.-++.|.+.++.
T Consensus 412 ~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT~~~ 472 (544)
T PF13000_consen 412 HVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFTVAT 472 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhccccc
Confidence 34444444443 4445777899999999999999999999988665555556666555543
No 318
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=52.81 E-value=27 Score=31.33 Aligned_cols=65 Identities=17% Similarity=0.123 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhh---------hhhhCChHH
Q 010268 32 AYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIV---------SDNFGRRKG 96 (514)
Q Consensus 32 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l---------~Dr~G~r~~ 96 (514)
+.-..+.+.+......+...+-.+.++.|.++.....++-...+..++..++.|.. .||+|||+.
T Consensus 20 f~yGvGHmlNDitAScWFTYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~ 93 (412)
T KOG4830|consen 20 FAYGVGHMLNDITASCWFTYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMS 93 (412)
T ss_pred eeechhHHHhhHHHHHHHHHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceee
Confidence 34456777777777777777777788899999998888888888999999998754 458999876
No 319
>COG4769 Predicted membrane protein [Function unknown]
Probab=51.56 E-value=24 Score=28.79 Aligned_cols=51 Identities=20% Similarity=0.033 Sum_probs=34.9
Q ss_pred HHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhh
Q 010268 73 VFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYLLLFFRCLVGL 129 (514)
Q Consensus 73 ~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 129 (514)
+.+...+.+...-++..++|+|..-+++...+ -+|.+|..++.+.+++.+-
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~m------GaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLGISVM------GAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeeehhhH------HHHHHhHHHHHHHHHHHhc
Confidence 44455566667777888889888755544332 3577888888888887764
No 320
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=50.33 E-value=3.5e+02 Score=29.07 Aligned_cols=34 Identities=24% Similarity=0.359 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHH
Q 010268 159 TFWTVGTILEAGIAWLVMPRLGWRWLLGLSAFPS 192 (514)
Q Consensus 159 ~~~~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~ 192 (514)
.+..++.++..+++.++...++|..++++.++++
T Consensus 108 ~~M~lT~livAL~a~~Li~GL~~~~ALLLGAILA 141 (810)
T TIGR00844 108 PVMTSGWLVIALFVWILVPGLNFPASLLMGACIT 141 (810)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhc
Confidence 3344555555555555544567777776665554
No 321
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=48.58 E-value=49 Score=26.93 Aligned_cols=50 Identities=14% Similarity=0.035 Sum_probs=32.5
Q ss_pred hHHHHHHHHHHHhhhccchhhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHH
Q 010268 116 NYYLLLFFRCLVGLGLGGGPVLASWFLEFIPAPNRGFWMVIFQTFWTVGTIL 167 (514)
Q Consensus 116 ~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 167 (514)
.+..++...++.|+| ...+.+.+++..+++++.|..+|+-..-.+++-+.
T Consensus 96 ~~~~~~~S~~~Fg~g--llGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 96 PWAVLLVSLVFFGLG--LLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred chHHHHHHHHHHHHH--HHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 444455555554443 23444555666678888999999988888877654
No 322
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=48.06 E-value=1.9e+02 Score=29.53 Aligned_cols=70 Identities=11% Similarity=-0.012 Sum_probs=32.8
Q ss_pred HHhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCCCcccCcccc----hhhhhhchhhHHHHHH
Q 010268 300 LILLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDINYGD----VFITSFAEFPGLLLAA 375 (514)
Q Consensus 300 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~g 375 (514)
.+++|++....++..+.....+.+...........+.. .++...+.+ ..++.+.+.+++..++
T Consensus 252 gDVFR~P~~~~lls~lvG~G~Qll~~~~~~~~~a~~g~-------------~~~~~rg~l~t~~i~~y~~~~~iaGy~S~ 318 (521)
T PF02990_consen 252 GDVFRPPKHPMLLSALVGTGIQLLFMALVTLFFAALGF-------------LSPNNRGSLLTAAIILYALTSFIAGYVSA 318 (521)
T ss_pred HHHhcCcCCchHHHhHhcchhhhhHHHHHHHHHHHhhh-------------ccccCcchHHHHHHHHHHHHhhHHHHHHH
Confidence 46777766555555544444444433333333322221 233322333 3344455555555555
Q ss_pred HHHHHHh
Q 010268 376 AMVDRLG 382 (514)
Q Consensus 376 ~l~dr~g 382 (514)
++-..++
T Consensus 319 ~~yk~~~ 325 (521)
T PF02990_consen 319 RLYKSFG 325 (521)
T ss_pred HHHHHcC
Confidence 5555554
No 323
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=46.41 E-value=85 Score=26.60 Aligned_cols=25 Identities=20% Similarity=0.549 Sum_probs=21.0
Q ss_pred HHHHHHHHHHhhhhHHhhhhhhCCh
Q 010268 70 TSVVFAGMLVGAYSWGIVSDNFGRR 94 (514)
Q Consensus 70 ~s~~~~~~~i~~~~~G~l~Dr~G~r 94 (514)
..-|.+++.+++.+.|++.||.-+|
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~~ 112 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRKR 112 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcc
Confidence 3567889999999999999998753
No 324
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=42.97 E-value=2.2e+02 Score=24.62 Aligned_cols=20 Identities=5% Similarity=-0.004 Sum_probs=10.8
Q ss_pred HHhHhHHHHHHHHHHhhcCc
Q 010268 453 RIGGMVCPLVAVALVHGCHQ 472 (514)
Q Consensus 453 ~~g~~~~p~i~g~l~~~~g~ 472 (514)
.++-.+|..+++.+.+..+.
T Consensus 172 i~~f~~Ga~~ga~l~~~~~~ 191 (209)
T PF06912_consen 172 ILSFFIGAILGALLYRRLGF 191 (209)
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 34444555555556666653
No 325
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=41.42 E-value=1e+02 Score=20.26 Aligned_cols=44 Identities=9% Similarity=0.043 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHHHHccCC
Q 010268 162 TVGTILEAGIAWLVMPRLGWRWLLGLSAFPSSLLLLLYSVTPES 205 (514)
Q Consensus 162 ~~G~~~~~~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~ 205 (514)
-+|.+++...+..-...+++.....+..+.+++...+.-.+|++
T Consensus 12 il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 12 ILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred HHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 34555555555554446777777777777777766665556554
No 326
>PHA03242 envelope glycoprotein M; Provisional
Probab=40.51 E-value=2.9e+02 Score=27.06 Aligned_cols=9 Identities=44% Similarity=0.438 Sum_probs=4.1
Q ss_pred hhhhHHHHH
Q 010268 113 FAPNYYLLL 121 (514)
Q Consensus 113 ~~~~~~~l~ 121 (514)
+++|+....
T Consensus 244 ~gNsF~v~~ 252 (428)
T PHA03242 244 AANNFHLSL 252 (428)
T ss_pred Hhcceeeeh
Confidence 445554433
No 327
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=40.08 E-value=2.2e+02 Score=26.03 Aligned_cols=35 Identities=11% Similarity=0.131 Sum_probs=22.1
Q ss_pred HHHHHhhHHHHHHHHHHHHHHhhhhhcccCcchhH
Q 010268 377 MVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTT 411 (514)
Q Consensus 377 l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (514)
+-||+.|-..+.++...+++.........-+|...
T Consensus 120 lkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval 154 (293)
T COG2962 120 LKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVAL 154 (293)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHH
Confidence 45888887777777777766655554444444433
No 328
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=38.25 E-value=82 Score=24.39 Aligned_cols=13 Identities=15% Similarity=0.181 Sum_probs=8.7
Q ss_pred HHHHHHccCChhh
Q 010268 196 LLLYSVTPESPRY 208 (514)
Q Consensus 196 ~~~~~~~~~~~~~ 208 (514)
+++++.+|+.|..
T Consensus 57 i~l~~~lp~~P~~ 69 (118)
T PRK10697 57 IILSFALDPMPDN 69 (118)
T ss_pred HHHHHhccCCccc
Confidence 5557778877753
No 329
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=38.15 E-value=1.5e+02 Score=24.15 Aligned_cols=26 Identities=15% Similarity=0.355 Sum_probs=21.7
Q ss_pred HHHHHHHHHhhhhHHhhhhhhCChHH
Q 010268 71 SVVFAGMLVGAYSWGIVSDNFGRRKG 96 (514)
Q Consensus 71 s~~~~~~~i~~~~~G~l~Dr~G~r~~ 96 (514)
.-|.+++.+...+.|++.+|..+++.
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~~ 85 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSRS 85 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccch
Confidence 46788889999999999999887643
No 330
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=35.30 E-value=1.6e+02 Score=21.30 Aligned_cols=42 Identities=12% Similarity=0.167 Sum_probs=29.0
Q ss_pred HHHHhhhhHHhhhhhhCC-------hHHHHHHHHHHHHHHHHHhhhhhH
Q 010268 76 GMLVGAYSWGIVSDNFGR-------RKGFLITAIVTSAAGLLSAFAPNY 117 (514)
Q Consensus 76 ~~~i~~~~~G~l~Dr~G~-------r~~l~~~~~~~~~~~~~~~~~~~~ 117 (514)
+...+.+.++++..|..+ ++.+.++.++...+..+++...|.
T Consensus 30 ~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 30 GATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 334455666777776654 678888888888888887776654
No 331
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=33.87 E-value=2.4e+02 Score=30.05 Aligned_cols=52 Identities=19% Similarity=0.111 Sum_probs=31.9
Q ss_pred hhHHhhhhh----hCChHHHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHhhhccc
Q 010268 82 YSWGIVSDN----FGRRKGFLITAIVTSAAGLLSAFA-PNYYLLLFFRCLVGLGLGG 133 (514)
Q Consensus 82 ~~~G~l~Dr----~G~r~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~g~ 133 (514)
.+++-++|. -||.+-++++.++++++.+...+. +..+.+....++.+++.++
T Consensus 41 ~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~m 97 (704)
T TIGR01666 41 IIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIM 97 (704)
T ss_pred HHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 334556663 356666778877777777766544 5556666666666655443
No 332
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=32.87 E-value=2.3e+02 Score=26.08 Aligned_cols=35 Identities=26% Similarity=0.344 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHhh-hhhHHHHHHHHHHHhhhccc
Q 010268 99 ITAIVTSAAGLLSAF-APNYYLLLFFRCLVGLGLGG 133 (514)
Q Consensus 99 ~~~~~~~~~~~~~~~-~~~~~~l~~~r~l~G~~~g~ 133 (514)
.+.++++++.++..+ .++.+.+.+..++.+++.++
T Consensus 4 ~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~m 39 (284)
T PF12805_consen 4 ATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGM 39 (284)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 344444344444443 34555566566666665543
No 333
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=31.16 E-value=1.5e+02 Score=19.09 Aligned_cols=33 Identities=18% Similarity=0.348 Sum_probs=19.9
Q ss_pred HHHHHHHHHhhhhHHhhhhh-hCChHHHHHHHHH
Q 010268 71 SVVFAGMLVGAYSWGIVSDN-FGRRKGFLITAIV 103 (514)
Q Consensus 71 s~~~~~~~i~~~~~G~l~Dr-~G~r~~l~~~~~~ 103 (514)
+.......+.....|+..|+ +|.++...+..++
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~l 40 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLL 40 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 34455556677788888885 5665554444333
No 334
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=31.15 E-value=3.8e+02 Score=28.56 Aligned_cols=52 Identities=27% Similarity=0.297 Sum_probs=32.8
Q ss_pred hhHHhhhhh----hCChHHHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHhhhccc
Q 010268 82 YSWGIVSDN----FGRRKGFLITAIVTSAAGLLSAFA-PNYYLLLFFRCLVGLGLGG 133 (514)
Q Consensus 82 ~~~G~l~Dr----~G~r~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~g~ 133 (514)
.+++-+.|. -||.+-++++.++++++.+...+. +..+.+....++.+++.++
T Consensus 41 ~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~m 97 (701)
T TIGR01667 41 IIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFIL 97 (701)
T ss_pred hHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 444555563 355677888888888887776654 4555666666666665443
No 335
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=31.05 E-value=4.2e+02 Score=24.44 Aligned_cols=56 Identities=9% Similarity=-0.060 Sum_probs=29.4
Q ss_pred HHHHHHHHhhhccchhhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010268 120 LLFFRCLVGLGLGGGPVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLV 175 (514)
Q Consensus 120 l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~~~l 175 (514)
.-..|.+.|+-.-.+-+.++++.-.+|++++--..--.....+++.++.|+++-.+
T Consensus 22 ~~~lr~~~g~~~vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 22 IPPLRVILGFPFVLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred hhHHHHHHHHHHHHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567777776555555567777777755432222222333334444555554443
No 336
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=30.01 E-value=1.4e+02 Score=20.04 Aligned_cols=36 Identities=25% Similarity=0.242 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHHhhhccchhhHHHHHHhhcCCCchh
Q 010268 116 NYYLLLFFRCLVGLGLGGGPVLASWFLEFIPAPNRG 151 (514)
Q Consensus 116 ~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~ 151 (514)
++..+......-+++.+..-....+++|..+++++|
T Consensus 27 ~it~F~~n~~~g~i~i~I~l~l~G~isE~i~~~Kgg 62 (63)
T PF06341_consen 27 NITAFLINQIAGLISIGITLFLAGLISEFISKQKGG 62 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 445555555555555555555567788887765543
No 337
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=29.14 E-value=2.2e+02 Score=23.30 Aligned_cols=35 Identities=11% Similarity=0.068 Sum_probs=25.2
Q ss_pred cccceeeccccccCcchhhHHHHHHHHHHHHhHhH
Q 010268 424 TFTVVYVYAPEIYPTSVRTTGVGVASSIGRIGGMV 458 (514)
Q Consensus 424 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 458 (514)
...+.|.+++..-.++..|..+|+-.+-.+++.+.
T Consensus 111 llGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 111 LLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 34556777777777788899999888777766543
No 338
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=28.92 E-value=3.7e+02 Score=23.25 Aligned_cols=60 Identities=12% Similarity=-0.032 Sum_probs=28.8
Q ss_pred eeccccccCcchhhHHHHHHHHHHHHhHhHHHHHHHHHHhhcCchhH-HHHHHHHHHHHHHH
Q 010268 429 YVYAPEIYPTSVRTTGVGVASSIGRIGGMVCPLVAVALVHGCHQTAA-LILFELVILLSGIS 489 (514)
Q Consensus 429 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~p~i~g~l~~~~g~~~~-~~~~~~~~~~~~~~ 489 (514)
..+..+ .+++.|-+..--......+...+.-+.+..+.+.+|.... +-+.+++.+....+
T Consensus 25 ~~lt~~-~~~~~r~~ia~~a~~~a~~ill~f~~~G~~iL~~fgIsl~af~IaGGiiL~~ia~ 85 (203)
T PF01914_consen 25 LSLTKG-MSPKERRRIARRASIIAFIILLIFAFFGQLILNFFGISLPAFRIAGGIILFLIAL 85 (203)
T ss_pred HHHhCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 334433 4444444444333444444444555556666777775533 44445444433333
No 339
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=28.83 E-value=5.9e+02 Score=25.31 Aligned_cols=121 Identities=14% Similarity=0.017 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-hhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHH
Q 010268 30 VLAYAGMGWISEAMEMMLLSFVGPA-VQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAG 108 (514)
Q Consensus 30 ~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~ 108 (514)
..+...+.+++..+..... .|. +..++|++.++...+.++..+...++.++--....+.|-|-....+.....++.
T Consensus 17 ~~~~lglQH~lamfg~~V~---VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p 93 (451)
T COG2233 17 KLLLLGLQHLLAMFGATVL---VPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAP 93 (451)
T ss_pred HHHHHHHHHHHHHHhcchH---hhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHH
Confidence 3445556666655544333 333 356789999999999999999999999887775555666766666655555555
Q ss_pred HHHhhh---hhHHHHHHHHHHHhhhccchhhHHH-HHHhhcCCCchhHH
Q 010268 109 LLSAFA---PNYYLLLFFRCLVGLGLGGGPVLAS-WFLEFIPAPNRGFW 153 (514)
Q Consensus 109 ~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~~~-~i~~~~~~~~r~~~ 153 (514)
...... +.....+.+-+..|+..-....... ++.+.+||---|..
T Consensus 94 ~i~~~~~~g~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG~V 142 (451)
T COG2233 94 MIAIGGTTGDGIAALLGGIIAAGLVYFLISPIVKIRLARLFPPVVTGPV 142 (451)
T ss_pred HHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeE
Confidence 444433 2356666666666666555533344 77788888655543
No 340
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=26.32 E-value=2.8e+02 Score=20.78 Aligned_cols=25 Identities=16% Similarity=0.190 Sum_probs=12.7
Q ss_pred HHhhhhHHhhhhh-hCChHHHHHHHH
Q 010268 78 LVGAYSWGIVSDN-FGRRKGFLITAI 102 (514)
Q Consensus 78 ~i~~~~~G~l~Dr-~G~r~~l~~~~~ 102 (514)
.+...+.|...|+ +|-++.+.+..+
T Consensus 56 il~G~~lG~WLD~~~~t~~~~tl~~l 81 (100)
T TIGR02230 56 TLLGVAVGIWLDRHYPSPFSWTLTML 81 (100)
T ss_pred HHHHHHHHHHHHhhcCCCcHHHHHHH
Confidence 3444556666664 555554443333
No 341
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=25.10 E-value=6.2e+02 Score=24.36 Aligned_cols=29 Identities=0% Similarity=-0.136 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHhhhhcCCCcchhHHHHH
Q 010268 43 MEMMLLSFVGPAVQSLWHLSPNQESLITS 71 (514)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~s~~~~g~i~s 71 (514)
...-.+...+....+++|+++...|.+..
T Consensus 236 ~lAe~lv~sIe~~v~~~Glp~afiGvIIa 264 (366)
T PRK10599 236 AVTKMNASPLETLLTSMNAPVAFTGFLVA 264 (366)
T ss_pred HHHHHhHhhHHHHHHhcCCCHHHHHHHHH
Confidence 33445566677788999999999998863
No 342
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=25.05 E-value=64 Score=24.07 Aligned_cols=52 Identities=13% Similarity=0.062 Sum_probs=38.6
Q ss_pred CcchhHHHHHHHHHHHHHhhhhHHhhhhhhCChHHHHHHHHHHHHHHHHHhh
Q 010268 62 SPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAF 113 (514)
Q Consensus 62 s~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~~~~ 113 (514)
+....|-..+++.-.+.+.++.+++..|+.-+-+-=.+|..++.+|...+.+
T Consensus 53 ~~~a~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~ 104 (109)
T COG1742 53 PAAAFGRVYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILF 104 (109)
T ss_pred CchhhhhHHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEe
Confidence 3445688889999999999999999999887766666666666555444433
No 343
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=24.71 E-value=1.9e+02 Score=18.17 Aligned_cols=12 Identities=25% Similarity=0.191 Sum_probs=5.0
Q ss_pred HhHhHHHHHHHH
Q 010268 454 IGGMVCPLVAVA 465 (514)
Q Consensus 454 ~g~~~~p~i~g~ 465 (514)
+|+.++..+.+.
T Consensus 6 iGa~vGg~l~~~ 17 (48)
T PF04226_consen 6 IGAFVGGWLFGL 17 (48)
T ss_pred HHHHHHHHHHHH
Confidence 344444444433
No 344
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=24.56 E-value=1.6e+02 Score=25.91 Aligned_cols=50 Identities=8% Similarity=0.024 Sum_probs=28.8
Q ss_pred HHHHHHhhhccch-hhHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 010268 122 FFRCLVGLGLGGG-PVLASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIA 172 (514)
Q Consensus 122 ~~r~l~G~~~g~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~i~ 172 (514)
..-.-.|+|.|.. ..+..-+.+.+| +......++-.+..-+..+.|-.+.
T Consensus 176 ALAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ 226 (241)
T PF11299_consen 176 ALAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMS 226 (241)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445567777766 555566677775 4555666665555555555444433
No 345
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=24.39 E-value=7e+02 Score=24.68 Aligned_cols=72 Identities=10% Similarity=0.055 Sum_probs=37.7
Q ss_pred hhHHhhhhhhCChHH-----HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhHHHHHHhhcCCCchhHHHHH
Q 010268 82 YSWGIVSDNFGRRKG-----FLITAIVTSAAGLLSAFAPNYYLLLFFRCLVGLGLGGGPVLASWFLEFIPAPNRGFWMVI 156 (514)
Q Consensus 82 ~~~G~l~Dr~G~r~~-----l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~ 156 (514)
+..=++.+.+.++++ +++|+.+...-.++.+++.+...-. +.++...++ ......|+.......+|+..++.
T Consensus 309 F~~fflfE~~~~~~iHpiQY~LVGlAl~lFYlLLLSlSEhi~F~~-AYliAa~a~--i~Li~~Y~~~vl~~~k~~~~~~~ 385 (430)
T PF06123_consen 309 FLAFFLFELLSKLRIHPIQYLLVGLALVLFYLLLLSLSEHIGFNL-AYLIAALAC--IGLISLYLSSVLKSWKRGLIFAG 385 (430)
T ss_pred HHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhhchHH-HHHHHHHHH--HHHHHHHHHHHHhcchHHHHHHH
Confidence 333344555555554 6677777666667777877643322 222222111 12333566666667777765543
No 346
>PRK13743 conjugal transfer protein TrbF; Provisional
Probab=22.93 E-value=3.8e+02 Score=21.01 Aligned_cols=63 Identities=6% Similarity=-0.068 Sum_probs=35.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcchhHHHHHHHHHHHHHhhhhHHhhh
Q 010268 26 FQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVS 88 (514)
Q Consensus 26 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~i~s~~~~~~~i~~~~~G~l~ 88 (514)
+-++.++.+..+.++-......+...+..+..+=.+.....-|=.-++.+.+.+-++-+|+++
T Consensus 40 Y~~LfiVFl~AG~vLw~vM~~iFd~CIDsWkAdpeLnn~rymWNilMYaIPy~L~Ala~GFlv 102 (141)
T PRK13743 40 YFDLFIVFLTAGIVLWVIMHSIFDACIDSWKADPELNNFRYMWNILMYVIPYTLWALAAGFLV 102 (141)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhcChhhhhHHHHHHHHHHHHHHHHHHHHhchhh
Confidence 333334444444445555555666666666665555555566666667777666666666554
No 347
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=22.89 E-value=2.7e+02 Score=21.08 Aligned_cols=22 Identities=14% Similarity=0.348 Sum_probs=13.2
Q ss_pred HHHhhHHHHHHHHHHHHHHhhh
Q 010268 379 DRLGRKLSMSSMFFCCCIFLVP 400 (514)
Q Consensus 379 dr~g~~~~~~~~~~~~~~~~~~ 400 (514)
+|+.+|+.........++.++.
T Consensus 84 er~~~~~~~a~~l~~~Gv~li~ 105 (113)
T PF13536_consen 84 ERLSPRRWLAILLILIGVILIA 105 (113)
T ss_pred CCCCHHHHHHHHHHHHHHHHHh
Confidence 5677777766655555554443
No 348
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=22.85 E-value=1.5e+02 Score=19.73 Aligned_cols=26 Identities=27% Similarity=0.510 Sum_probs=14.1
Q ss_pred hHHHHHHhHHHH----HHHHHHHHHccCCh
Q 010268 181 WRWLLGLSAFPS----SLLLLLYSVTPESP 206 (514)
Q Consensus 181 w~~~f~~~~~~~----~i~~~~~~~~~~~~ 206 (514)
+|..|.+..++. ++-+++++.+|+.|
T Consensus 31 vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 31 VRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 466665555432 22245566778764
No 349
>KOG0682 consensus Ammonia permease [Inorganic ion transport and metabolism]
Probab=22.70 E-value=6.7e+02 Score=25.09 Aligned_cols=83 Identities=14% Similarity=-0.012 Sum_probs=39.7
Q ss_pred hhHHhhhhhhCChHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHhhhccchhhHHHHHHhhcCCCchhHHHHH
Q 010268 82 YSWGIVSDNFGRRKGFLITAIVTSAAGLL-----SAFAPNYYLLLFFRCLVGLGLGGGPVLASWFLEFIPAPNRGFWMVI 156 (514)
Q Consensus 82 ~~~G~l~Dr~G~r~~l~~~~~~~~~~~~~-----~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~ 156 (514)
-+.-.+.|++-.||.-.++++=..++.+. +.+. ..|.-+ +.|+..+.......-+.|+..-++-=.+..+
T Consensus 272 glt~~~~d~~~~~kwsv~~~cnG~laGlVaiT~gc~~v-~pWaAi----viG~va~~~~~~~~kL~~~lkvDDpl~~f~~ 346 (500)
T KOG0682|consen 272 GLTWLIIDYLRHGKWSVIGLCNGILAGLVAITPGCGVV-EPWAAI----VIGAVAGLVCNAANKLKERLKVDDPLDAFAV 346 (500)
T ss_pred hhhhhhhhhhhcCCcchhhhHHHHHHHHHhhcCCCccc-CcHHHH----HHhHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 33445667766666544443332222222 1222 233333 3344333333333455666665665556666
Q ss_pred HHHHHHHHHHHHH
Q 010268 157 FQTFWTVGTILEA 169 (514)
Q Consensus 157 ~~~~~~~G~~~~~ 169 (514)
...+...|.+.-.
T Consensus 347 Hgv~G~wG~I~~g 359 (500)
T KOG0682|consen 347 HGVGGIWGLIFTG 359 (500)
T ss_pred hccccchhhheee
Confidence 6666666665443
No 350
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=22.55 E-value=2.3e+02 Score=22.71 Aligned_cols=23 Identities=13% Similarity=0.197 Sum_probs=17.4
Q ss_pred HHhhcCCCchhHHHHHHHHHHHH
Q 010268 141 FLEFIPAPNRGFWMVIFQTFWTV 163 (514)
Q Consensus 141 i~~~~~~~~r~~~~~~~~~~~~~ 163 (514)
+.|++|+..|....+........
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~ 82 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSA 82 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHH
Confidence 57999999999887776655443
No 351
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=22.52 E-value=2.4e+02 Score=27.19 Aligned_cols=18 Identities=17% Similarity=0.312 Sum_probs=10.5
Q ss_pred hchhhHHHHHHHHHHHHh
Q 010268 365 FAEFPGLLLAAAMVDRLG 382 (514)
Q Consensus 365 ~~~~~g~~~~g~l~dr~g 382 (514)
+..++...+.|++..|.+
T Consensus 6 i~~i~~ii~~G~~~~~~~ 23 (385)
T PF03547_consen 6 ILPIFLIILLGYLLGRFG 23 (385)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 344455556677777653
No 352
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=22.10 E-value=3.5e+02 Score=24.87 Aligned_cols=13 Identities=15% Similarity=-0.312 Sum_probs=5.2
Q ss_pred cCcchhHHHHHHH
Q 010268 405 QPKGLTTGLLFGA 417 (514)
Q Consensus 405 ~~~~~~~~~~~~~ 417 (514)
+++|...+.+++.
T Consensus 21 ~~~~l~~~~~~~~ 33 (284)
T PF12805_consen 21 PYPWLLILVLALL 33 (284)
T ss_pred hccHHHHHHHHHH
Confidence 3344444443333
No 353
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=21.54 E-value=9.2e+02 Score=25.00 Aligned_cols=24 Identities=8% Similarity=0.098 Sum_probs=12.0
Q ss_pred ccchhhhhhchhhHHHHHHHHHHH
Q 010268 357 YGDVFITSFAEFPGLLLAAAMVDR 380 (514)
Q Consensus 357 ~~~~~~~~~~~~~g~~~~g~l~dr 380 (514)
...+..++++..+--++.+....|
T Consensus 328 ~~~l~~~gLG~~~Plll~~~~~~~ 351 (571)
T PRK00293 328 GLTLYLLALGMGLPLILITTFGNK 351 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444555666664444444444443
No 354
>PRK11588 hypothetical protein; Provisional
Probab=20.98 E-value=8.8e+02 Score=24.59 Aligned_cols=48 Identities=10% Similarity=0.060 Sum_probs=25.3
Q ss_pred HhhhhhhCChHHHH--HHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhcc
Q 010268 85 GIVSDNFGRRKGFL--ITAIVTSAAGLLSAFAPNYYLLLFFRCLVGLGLG 132 (514)
Q Consensus 85 G~l~Dr~G~r~~l~--~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 132 (514)
+++.+|++.|..++ +.+++++++....+++.+...++-..+......|
T Consensus 137 ~~l~~k~~~~~~llIpil~~lFsl~G~~~G~~Ee~i~f~pi~v~l~~alG 186 (506)
T PRK11588 137 LALIRKTRGNEILFIPVLFILFSLGGAVFGMGEEAIAFAIIIAPLMVRLG 186 (506)
T ss_pred HHHHHHhCCCcEEeHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC
Confidence 66778887664433 3344455555555566555554444443333333
No 355
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.70 E-value=72 Score=31.94 Aligned_cols=31 Identities=13% Similarity=-0.143 Sum_probs=18.3
Q ss_pred CcccCcccchhhhhhchhhHHHHHHHHHHHH
Q 010268 351 KSRDINYGDVFITSFAEFPGLLLAAAMVDRL 381 (514)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~ 381 (514)
.++..-+.+.+...+.-++..+++|+.+-|+
T Consensus 356 lSPs~RGsLmT~~~~l~v~~G~~agY~s~rl 386 (628)
T KOG1278|consen 356 LSPSSRGSLMTAMVLLFVFMGFVAGYVSARL 386 (628)
T ss_pred CCccccccHHHHHHHHHHHHHHhhhhhhhhh
Confidence 5555556665555555566666666666554
No 356
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=20.63 E-value=2.4e+02 Score=22.69 Aligned_cols=23 Identities=17% Similarity=0.335 Sum_probs=17.2
Q ss_pred HHHhhcCCCchhHHHHHHHHHHH
Q 010268 140 WFLEFIPAPNRGFWMVIFQTFWT 162 (514)
Q Consensus 140 ~i~~~~~~~~r~~~~~~~~~~~~ 162 (514)
-+.|++|+..|..+.+.......
T Consensus 57 ALkDm~Pp~~R~~i~~~~s~t~s 79 (145)
T TIGR00986 57 ALKDIVPPTTRGWIYHKYSTTTN 79 (145)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHH
Confidence 35799999999887777665544
No 357
>PRK10692 hypothetical protein; Provisional
Probab=20.49 E-value=2e+02 Score=20.67 Aligned_cols=19 Identities=11% Similarity=0.232 Sum_probs=11.2
Q ss_pred ChHHHHHHHHHHHHHHHHH
Q 010268 93 RRKGFLITAIVTSAAGLLS 111 (514)
Q Consensus 93 ~r~~l~~~~~~~~~~~~~~ 111 (514)
||...++|.+++++|.+.+
T Consensus 3 Rk~a~~~GN~lMglGmv~M 21 (92)
T PRK10692 3 RKNASLLGNVLMGLGLVVM 21 (92)
T ss_pred chhhHHHhhHHHHHHHHHH
Confidence 5566666666666555443
No 358
>COG3619 Predicted membrane protein [Function unknown]
Probab=20.29 E-value=6.1e+02 Score=22.45 Aligned_cols=31 Identities=10% Similarity=0.157 Sum_probs=17.6
Q ss_pred cchhHHHHHHHHHHHHHhhhhHHhhhhhhCC
Q 010268 63 PNQESLITSVVFAGMLVGAYSWGIVSDNFGR 93 (514)
Q Consensus 63 ~~~~g~i~s~~~~~~~i~~~~~G~l~Dr~G~ 93 (514)
+...........+...++......+..|..|
T Consensus 54 ~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 54 DAALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4445556666666666775555555555443
Done!