BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010270
(514 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1MZK|A Chain A, Nmr Structure Of Kinase-Interacting Fha Domain Of Kinase
Associated Protein Phosphatase, Kapp In Arabidopsis
Length = 139
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/134 (65%), Positives = 109/134 (81%)
Query: 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKL 235
S L LEV++GP+ G++ +V S ++S+LP+ LGRVSPSD+ LKDSEVSGKHA I WN K
Sbjct: 6 SWLFLEVIAGPAIGLQHAVNSTSSSKLPVKLGRVSPSDLALKDSEVSGKHAQITWNSTKF 65
Query: 236 KWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITSETVS 295
KWELVDMGSLNGTL+NS I+HPD GSR WG P+EL S DIITLGTT+ ++V+I+S+
Sbjct: 66 KWELVDMGSLNGTLVNSHSISHPDLGSRKWGNPVELASDDIITLGTTTKVYVRISSQNEF 125
Query: 296 QIPFGVGVASDPMA 309
QIPF +GVASDPMA
Sbjct: 126 QIPFKIGVASDPMA 139
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 401 GCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGE 460
GCTA V L+ +++ AN GDS CV+ +GK ++MS DH+ E RI++ G
Sbjct: 131 GCTAVVALLHG---KDLYV--ANAGDSRCVVCRNGKALEMSFDHKPEDTVEYQRIEKAGG 185
Query: 461 PLK-DGETRLCGLNLARMLGDKFLKQQDARFSAEPYISPVVHIDQAS 506
+ DG GLNL+R +GD K + + E IS + I++ +
Sbjct: 186 RVTLDGRVN-GGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKIT 231
>pdb|2KB4|A Chain A, Nmr Structure Of The Unphosphorylated Form Of Odhi, Odhi
Length = 143
Score = 45.8 bits (107), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 180 LEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWEL 239
L V GP+ G R + T GR SD+ L D VS +HA + N+ ++E+
Sbjct: 49 LVVKRGPNAGARFLLDQPTT-----TAGRHPESDIFLDDVTVSRRHA--EFRINEGEFEV 101
Query: 240 VDMGSLNGTLLNSQPIN 256
VD+GSLNGT +N +P N
Sbjct: 102 VDVGSLNGTYVNREPRN 118
>pdb|2KB3|A Chain A, Nmr Structure Of The Phosphorylated Form Of Odhi, Podhi
Length = 143
Score = 45.8 bits (107), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 180 LEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWEL 239
L V GP+ G R + T GR SD+ L D VS +HA + N+ ++E+
Sbjct: 49 LVVKRGPNAGARFLLDQPTT-----TAGRHPESDIFLDDVTVSRRHA--EFRINEGEFEV 101
Query: 240 VDMGSLNGTLLNSQPIN 256
VD+GSLNGT +N +P N
Sbjct: 102 VDVGSLNGTYVNREPRN 118
>pdb|2KKL|A Chain A, Solution Nmr Structure Of Fha Domain Of Mb1858 From
Mycobacterium Bovis. Northeast Structural Genomics
Consortium Target Mbr243c (24-155)
Length = 140
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 178 LSLEVVS-GPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLK 236
L+L VV GP+ G R + A S GR SD+ L D VS +HA N+
Sbjct: 32 LALLVVKRGPNAGSRFLLDQAITSA-----GRHPDSDIFLDDVTVSRRHAEFRLENNE-- 84
Query: 237 WELVDMGSLNGTLLNSQPIN 256
+ +VD+GSLNGT +N +P++
Sbjct: 85 FNVVDVGSLNGTYVNREPVD 104
>pdb|1UHT|A Chain A, Solution Structure Of The Fha Domain Of Arabidopsis
Thaliana Hypothetical Protein
Length = 118
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 15/116 (12%)
Query: 177 CLSLEVVSGPSRGIRCSVQSANASRLPLTLGR-VSPSDVLLKDSEVSGKHALINWNPNKL 235
L L V GP G + + R+ GR V +++ +KD+ +S KH I +
Sbjct: 12 SLRLVFVKGPREGDALDYKPGSTIRV----GRIVRGNEIAIKDAGISTKHLRIESDSGN- 66
Query: 236 KWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITS 291
W + D+GS NGTLLNS ++ S + L GD+I LG +SI V S
Sbjct: 67 -WVIQDLGSSNGTLLNSNALDPETS--------VNLGDGDVIKLGEYTSILVNFVS 113
>pdb|2KFU|A Chain A, Pknb-Phosphorylated Rv1827
Length = 162
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 180 LEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWEL 239
L V GP+ G R + A S GR SD+ L D VS +HA N+ + +
Sbjct: 58 LVVKRGPNAGSRFLLDQAITS-----AGRHPDSDIFLDDVTVSRRHAEFRLENNE--FNV 110
Query: 240 VDMGSLNGTLLNSQPIN 256
VD+GSLNGT +N +P++
Sbjct: 111 VDVGSLNGTYVNREPVD 127
>pdb|2XT9|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Alpha-
Ketoglutarate Decarboxylase In Complex With Gara
Length = 115
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 180 LEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWEL 239
L V GP+ G R + S GR SD+ L D VS +HA + +++
Sbjct: 14 LVVKRGPNAGSRFLLDQPTTS-----AGRHPDSDIFLDDVTVSRRHAEFRLEGGE--FQV 66
Query: 240 VDMGSLNGTLLNSQPIN 256
VD+GSLNGT +N +P++
Sbjct: 67 VDVGSLNGTYVNREPVD 83
>pdb|3OUN|A Chain A, Crystal Structure Of The Fhaa Fha Domain Complexed With
The Intracellular Domain Of Rv3910
Length = 157
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 13/80 (16%)
Query: 206 LGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPINHPDSGSRHW 265
+GR + L D+ VS +H I W+ L D+ S NGT +N+ P+ + W
Sbjct: 89 IGRGQDAQFRLPDTGVSRRHLEIRWDGQVAL--LADLNSTNGTTVNNAPV-------QEW 139
Query: 266 GKPMELTSGDIITLGTTSSI 285
+L GD+I LG + I
Sbjct: 140 ----QLADGDVIRLGHSEII 155
>pdb|2LC1|A Chain A, Rv0020c_fha Structure
Length = 100
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 13/80 (16%)
Query: 206 LGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPINHPDSGSRHW 265
+GR + L D+ VS +H I W+ L D+ S NGT +N+ P+
Sbjct: 30 IGRGQDAQFRLPDTGVSRRHLEIRWDGQVAL--LADLNSTNGTTVNNAPV---------- 77
Query: 266 GKPMELTSGDIITLGTTSSI 285
+ +L GD+I LG + I
Sbjct: 78 -QEWQLADGDVIRLGHSEII 96
>pdb|3PO8|A Chain A, Structural And Functional Analysis Of
Phosphothreonine-Dependent Fha Domain Interactions
pdb|3POA|A Chain A, Structural And Functional Analysis Of
Phosphothreonine-Dependent Fha Domain Interactions
Length = 100
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 13/80 (16%)
Query: 206 LGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPINHPDSGSRHW 265
+GR + L D+ VS +H I W+ L D+ S NGT +N+ P+ + W
Sbjct: 27 IGRGQDAQFRLPDTGVSRRHLEIRWDGQVAL--LADLNSTNGTTVNNAPV-------QEW 77
Query: 266 GKPMELTSGDIITLGTTSSI 285
+L GD+I LG + I
Sbjct: 78 ----QLADGDVIRLGHSEII 93
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 423 NVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCG-LNLARMLGDK 481
N GDS V+ +G+ ++DH+ + E+ RIQ G + R+ G L ++R LGD
Sbjct: 150 NCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMI--QRVNGSLAVSRALGDY 207
Query: 482 FLKQQDARFSAEPYISPVVHIDQASKA----FALLA 513
K D + E +SP + + +A F +LA
Sbjct: 208 DYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILA 243
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 359 KMVAAILSDSLKRERLLSQCDA-----SDVLRDAFFQTEA---SMNHHYEGCTATVLLVW 410
+M A+ + K + +LS D L ++F + ++ S+ G T+ V +V+
Sbjct: 73 RMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIESVAPETVGSTSVVAVVF 132
Query: 411 ADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQET-GEPLKDGETRL 469
++IF AN GDS V+ + +S DH+ E RI+ G+ ++ R+
Sbjct: 133 P---SHIFV--ANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGARV 187
Query: 470 CG-LNLARMLGDKFLK 484
G L ++R +GD++LK
Sbjct: 188 FGVLAMSRSIGDRYLK 203
>pdb|3GQS|A Chain A, Crystal Structure Of The Fha Domain Of Ct664 Protein From
Chlamydia Trachomatis
pdb|3GQS|B Chain B, Crystal Structure Of The Fha Domain Of Ct664 Protein From
Chlamydia Trachomatis
Length = 106
Score = 33.5 bits (75), Expect = 0.30, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 212 SDVLLKDSEVSGKHA-LINWNPNKLKWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPME 270
+D++L D +S +HA +I N N + E D+GS NG ++ + I H +
Sbjct: 36 ADIVLSDMSISRQHAKIIIGNDNSVLIE--DLGSKNGVIVEGRKIEHQST---------- 83
Query: 271 LTSGDIITLGTT 282
L++ ++ LGTT
Sbjct: 84 LSANQVVALGTT 95
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 401 GCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQET-G 459
G T+ V +V+ ++IF AN GDS V+ + +S DH+ E RI+ G
Sbjct: 126 GSTSVVAVVFP---SHIFV--ANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGG 180
Query: 460 EPLKDGETRLCG-LNLARMLGDKFLK 484
+ ++ R+ G L ++R +GD++LK
Sbjct: 181 KVIQWNGARVFGVLAMSRSIGDRYLK 206
>pdb|2JQJ|A Chain A, Nmr Structure Of Yeast Dun1 Fha Domain
pdb|2JQL|A Chain A, Nmr Structure Of The Yeast Dun1 Fha Domain In Complex With
A Doubly Phosphorylated (Pt) Peptide Derived From Rad53
Scd1
Length = 151
Score = 33.5 bits (75), Expect = 0.32, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 18/131 (13%)
Query: 172 ADQRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHA---LI 228
+ + +CL V P + + + + N + T+GR DV+L + ++S HA L+
Sbjct: 12 SSEYTCLGHLVNLIPGKEQKVEITNRNVT----TIGRSRSCDVILSEPDISTFHAEFHLL 67
Query: 229 NWNPNKLKWELVDM--GSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIH 286
+ + + L+++ S NGT +N G+R K L +GD I G + S
Sbjct: 68 QMDVDNFQRNLINVIDKSRNGTFIN---------GNRLVKKDYILKNGDRIVFGKSCSFL 118
Query: 287 VQITSETVSQI 297
+ S + + I
Sbjct: 119 FKYASSSSTDI 129
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 401 GCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQET-G 459
G T+ V +V+ ++IF AN GDS V+ + +S DH+ E RI+ G
Sbjct: 138 GSTSVVAVVFP---SHIFV--ANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGG 192
Query: 460 EPLKDGETRLCG-LNLARMLGDKFLK 484
+ ++ R+ G L ++R +GD++LK
Sbjct: 193 KVIQWNGARVFGVLAMSRSIGDRYLK 218
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 401 GCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQET-G 459
G T+ V +V+ +IF AN GDS V+ + +S DH+ E RI+ G
Sbjct: 132 GSTSVVAVVFP---THIFV--ANCGDSRAVLCRGKTPLALSVDHKPDRDDEAARIEAAGG 186
Query: 460 EPLKDGETRLCG-LNLARMLGDKFLK 484
+ ++ R+ G L ++R +GD++LK
Sbjct: 187 KVIRWNGARVFGVLAMSRSIGDRYLK 212
>pdb|3D8K|A Chain A, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|B Chain B, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|C Chain C, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|D Chain D, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
Length = 377
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 420 QCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLK--DGETRLCGL 472
A++G+S CV+ I +S H +S+ ER R+Q G +GE L G+
Sbjct: 169 HVASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTTVNGELLLGGV 223
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
Query: 401 GCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGE 460
G TA V LV + ++I +N GDS V+ + + +S DH+ E RI+ G
Sbjct: 155 GSTAVVALVCS---SHIVV--SNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGG 209
Query: 461 PLKDGE-TRLCG-LNLARMLGDKFLKQQDARFSAEPYISP 498
+ + R+ G L ++R +GD++LK PY+ P
Sbjct: 210 KVIQWQGARVFGVLAMSRSIGDRYLK---------PYVIP 240
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
Query: 401 GCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGE 460
G TA V LV + ++I +N GDS V+ + + +S DH+ E RI+ G
Sbjct: 158 GSTAVVALVCS---SHIVV--SNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGG 212
Query: 461 PLKDGE-TRLCG-LNLARMLGDKFLKQQDARFSAEPYISP 498
+ + R+ G L ++R +GD++LK PY+ P
Sbjct: 213 KVIQWQGARVFGVLAMSRSIGDRYLK---------PYVIP 243
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
Query: 401 GCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGE 460
G TA V LV + ++I +N GDS V+ + + +S DH+ E RI+ G
Sbjct: 141 GSTAVVALVCS---SHIVV--SNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGG 195
Query: 461 PLKDGE-TRLCG-LNLARMLGDKFLKQQDARFSAEPYISP 498
+ + R+ G L ++R +GD++LK PY+ P
Sbjct: 196 KVIQWQGARVFGVLAMSRSIGDRYLK---------PYVIP 226
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 401 GCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETG 459
G TATV L+ DG I A+VGDS ++ GK +K++ DH E+ RI++ G
Sbjct: 216 GTTATVALLR-DG---IELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCG 270
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
Query: 401 GCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGE 460
G TA V LV + ++I +N GDS V+ + + +S DH+ E RI+ G
Sbjct: 156 GSTAVVALVCS---SHIVV--SNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGG 210
Query: 461 PLKDGE-TRLCG-LNLARMLGDKFLKQQDARFSAEPYISP 498
+ + R+ G L ++R +GD++LK PY+ P
Sbjct: 211 KVIQWQGARVFGVLAMSRSIGDRYLK---------PYVIP 241
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
Query: 401 GCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGE 460
G TA V LV + ++I +N GDS V+ + + +S DH+ E RI+ G
Sbjct: 165 GSTAVVALVCS---SHIVV--SNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGG 219
Query: 461 PLKDGE-TRLCG-LNLARMLGDKFLKQQDARFSAEPYISP 498
+ + R+ G L ++R +GD++LK PY+ P
Sbjct: 220 KVIQWQGARVFGVLAMSRSIGDRYLK---------PYVIP 250
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
pdb|2ISN|B Chain B, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
Length = 364
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 423 NVGDS-ACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKDGET-RLCG-LNLARMLG 479
N+GDS A +++ DG ++S+DH+ +E RI++ G ++ + R+ G L L+R G
Sbjct: 179 NIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVETFDVPRVDGVLALSRAFG 238
Query: 480 DKFLK 484
D K
Sbjct: 239 DSDFK 243
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
Query: 401 GCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGE 460
G TA V LV + ++I +N GDS V+ + + +S DH+ E RI+ G
Sbjct: 152 GSTAVVALVCS---SHIVV--SNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGG 206
Query: 461 PLKDGE-TRLCG-LNLARMLGDKFLKQQDARFSAEPYISP 498
+ + R+ G L ++R +GD++LK PY+ P
Sbjct: 207 KVIQWQGARVFGVLAMSRSIGDRYLK---------PYVIP 237
>pdb|3JSO|A Chain A, Classic Protein With A New Twist: Crystal Structure Of A
Lexa Repressor Dna Complex
pdb|3JSO|B Chain B, Classic Protein With A New Twist: Crystal Structure Of A
Lexa Repressor Dna Complex
pdb|3JSP|A Chain A, Classic Protein With A New Twist: Crystal Structure Of A
Lexa Repressor Dna Complex
pdb|3JSP|B Chain B, Classic Protein With A New Twist: Crystal Structure Of A
Lexa Repressor Dna Complex
pdb|3K3R|E Chain E, Unrefined Crystal Structure Of A Lexa-Dna Complex
pdb|3K3R|F Chain F, Unrefined Crystal Structure Of A Lexa-Dna Complex
Length = 202
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 11/79 (13%)
Query: 180 LEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKH----ALINWNPNKL 235
+E+VSG SRGIR + LPL +GRV+ + LL + G + +L N + L
Sbjct: 56 IEIVSGASRGIRLLQEEEEG--LPL-VGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFL 112
Query: 236 ----KWELVDMGSLNGTLL 250
+ D+G ++G LL
Sbjct: 113 LRVSGMSMKDIGIMDGDLL 131
>pdb|1JHF|A Chain A, Lexa G85d Mutant
pdb|1JHF|B Chain B, Lexa G85d Mutant
Length = 202
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 11/79 (13%)
Query: 180 LEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKH----ALINWNPNKL 235
+E+VSG SRGIR + LPL +GRV+ + LL + G + +L N + L
Sbjct: 56 IEIVSGASRGIRLLQEEEEG--LPL-VGRVAADEPLLAQQHIEGHYQVDPSLFKPNADFL 112
Query: 236 ----KWELVDMGSLNGTLL 250
+ D+G ++G LL
Sbjct: 113 LRVSGMSMKDIGIMDGDLL 131
>pdb|1JHH|A Chain A, Lexa S119a Mutant
pdb|1JHH|B Chain B, Lexa S119a Mutant
Length = 202
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 11/79 (13%)
Query: 180 LEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKH----ALINWNPNKL 235
+E+VSG SRGIR + LPL +GRV+ + LL + G + +L N + L
Sbjct: 56 IEIVSGASRGIRLLQEEEEG--LPL-VGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFL 112
Query: 236 ----KWELVDMGSLNGTLL 250
+ D+G ++G LL
Sbjct: 113 LRVSGMAMKDIGIMDGDLL 131
>pdb|3ELS|A Chain A, Crystal Structure Of Yeast Pml1p, Residues 51-204
Length = 158
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 10/73 (13%)
Query: 209 VSPSDVLLKDSEVSGKHALINWNPNK--LKWELVDMGSLNGTLLNSQPINHPDSGSRHWG 266
+ +D+ + + S +H +I + + LK ++D+ S NGT LN+ I G+R+
Sbjct: 78 IVVADIGIPEETSSKQHCVIQFRNVRGILKCYVMDLDSSNGTCLNNVVI----PGARY-- 131
Query: 267 KPMELTSGDIITL 279
+EL SGD++TL
Sbjct: 132 --IELRSGDVLTL 142
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 401 GCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGE 460
G TATV L+ DG I A+VGDS ++ GK +K++ DH E+ RI++ G
Sbjct: 102 GTTATVALL-RDG---IELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGG 157
Query: 461 PL---KDGETRLCG-LNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALL 512
+ G+ + G L + R +GD LK + AEP + + + A +F +L
Sbjct: 158 FVAWNSLGQPHVNGRLAMTRSIGDLDLKT--SGVIAEPE-TKRIKLHHADDSFLVL 210
>pdb|3ELV|A Chain A, Crystal Structure Of Full-Length Yeast Pml1p
pdb|3ELV|B Chain B, Crystal Structure Of Full-Length Yeast Pml1p
Length = 205
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 10/70 (14%)
Query: 212 SDVLLKDSEVSGKHALINWNPNK--LKWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPM 269
+D+ + + S +H +I + + LK ++D+ S NGT LN+ I G+R+ +
Sbjct: 128 ADIGIPEETSSKQHCVIQFRNVRGILKCYVMDLDSSNGTCLNNVVI----PGARY----I 179
Query: 270 ELTSGDIITL 279
EL SGD++TL
Sbjct: 180 ELRSGDVLTL 189
>pdb|2JKD|A Chain A, Structure Of The Yeast Pml1 Splicing Factor And Its
Integration Into The Res Complex
pdb|2JKD|B Chain B, Structure Of The Yeast Pml1 Splicing Factor And Its
Integration Into The Res Complex
Length = 187
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 10/70 (14%)
Query: 212 SDVLLKDSEVSGKHALINWNPNK--LKWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPM 269
+D+ + + S +H +I + + LK ++D+ S NGT LN+ I G+R+ +
Sbjct: 104 ADIGIPEETSSKQHCVIQFRNVRGILKCYVMDLDSSNGTCLNNVVI----PGARY----I 155
Query: 270 ELTSGDIITL 279
EL SGD++TL
Sbjct: 156 ELRSGDVLTL 165
>pdb|4H87|A Chain A, Crystal Structure Of A Fha Domain Of Kanadaptin (Slc4a1ap)
From Homo Sapiens At 1.55 A Resolution
pdb|4H87|B Chain B, Crystal Structure Of A Fha Domain Of Kanadaptin (Slc4a1ap)
From Homo Sapiens At 1.55 A Resolution
Length = 130
Score = 29.3 bits (64), Expect = 6.1, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
Query: 206 LGRVSPSDVLLKDSEVSGKHALIN---------WNPNKLKWELVDMGSLNGTLLNSQPI 255
GR+S DV L+ VS HA++ + N + L D+GS +GT LN I
Sbjct: 45 FGRLSGCDVCLEHPSVSRYHAVLQHRASGPDGECDSNGPGFYLYDLGSTHGTFLNKTRI 103
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,162,774
Number of Sequences: 62578
Number of extensions: 568331
Number of successful extensions: 1386
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1367
Number of HSP's gapped (non-prelim): 37
length of query: 514
length of database: 14,973,337
effective HSP length: 103
effective length of query: 411
effective length of database: 8,527,803
effective search space: 3504927033
effective search space used: 3504927033
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)