Query 010270
Match_columns 514
No_of_seqs 427 out of 2979
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 03:08:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010270.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010270hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i0o_A Ser/Thr phosphatase; be 100.0 1.5E-32 5.3E-37 278.8 17.8 192 298-514 22-243 (304)
2 2p8e_A PPM1B beta isoform vari 100.0 1.2E-32 4E-37 280.2 14.5 203 297-514 22-244 (307)
3 3kdj_B Protein phosphatase 2C 100.0 5E-32 1.7E-36 276.6 18.3 200 299-514 9-228 (316)
4 3qn1_B Protein phosphatase 2C 100.0 4E-32 1.4E-36 280.0 15.3 199 300-514 15-257 (337)
5 2iq1_A Protein phosphatase 2C 100.0 1.5E-31 5.1E-36 267.6 18.0 191 299-514 8-212 (274)
6 2irm_A Mitogen-activated prote 100.0 4.6E-32 1.6E-36 281.7 14.5 199 298-514 14-275 (358)
7 4da1_A Protein phosphatase 1K, 100.0 2.5E-31 8.5E-36 279.3 18.3 221 268-514 87-326 (389)
8 1a6q_A Phosphatase 2C; catalyt 100.0 1.2E-31 4E-36 281.2 14.5 199 298-514 21-238 (382)
9 2i44_A Serine-threonine phosph 100.0 7.6E-31 2.6E-35 268.2 18.4 204 298-514 21-265 (324)
10 2pnq_A [pyruvate dehydrogenase 100.0 5.4E-31 1.8E-35 282.7 16.8 197 302-514 40-346 (467)
11 3d8k_A PP2C, protein phosphata 100.0 3.2E-31 1.1E-35 277.4 14.4 196 298-514 12-269 (377)
12 2isn_A NYSGXRC-8828Z, phosphat 100.0 9E-31 3.1E-35 272.8 16.8 195 299-514 13-276 (364)
13 2j4o_A Mitogen-activated prote 100.0 2.6E-31 8.9E-36 280.2 12.5 202 298-514 26-289 (401)
14 1mzk_A Kinase associated prote 99.9 5E-25 1.7E-29 199.5 15.1 136 174-309 4-139 (139)
15 2pk0_A Serine/threonine protei 99.9 3.9E-24 1.3E-28 209.8 15.6 182 298-514 5-196 (250)
16 2j82_A TPPHA, protein serine-t 99.9 4.3E-23 1.5E-27 201.0 17.7 181 300-514 2-192 (240)
17 1txo_A Putative bacterial enzy 99.9 7.8E-23 2.7E-27 199.0 17.3 175 297-514 3-187 (237)
18 4h87_A Kanadaptin; FHA domain 99.9 2.3E-22 8E-27 179.9 13.1 110 166-287 9-127 (130)
19 2jfr_A Ser-Thr phosphatase MSP 99.9 5.8E-22 2E-26 192.4 13.6 173 298-514 5-185 (234)
20 3gqs_A Adenylate cyclase-like 99.8 1.4E-20 4.7E-25 162.4 12.9 100 175-289 2-102 (106)
21 1uht_A Expressed protein; FHA 99.8 1.2E-20 4.2E-25 165.7 12.0 107 172-292 7-114 (118)
22 3va4_A Mediator of DNA damage 99.8 1.7E-20 5.8E-25 168.2 11.9 113 164-290 12-127 (132)
23 2xt9_B Putative signal transdu 99.8 4.5E-20 1.5E-24 161.5 13.4 100 174-291 8-107 (115)
24 2kb3_A Oxoglutarate dehydrogen 99.8 9.3E-20 3.2E-24 165.6 13.3 97 174-288 43-139 (143)
25 2jpe_A Nuclear inhibitor of pr 99.8 1.3E-20 4.3E-25 170.7 6.8 111 165-287 22-133 (140)
26 3po8_A RV0020C protein, putati 99.8 1.4E-19 4.7E-24 154.5 11.4 94 175-288 3-96 (100)
27 1r21_A Antigen KI-67; beta san 99.8 1.4E-19 4.8E-24 161.3 11.3 105 170-291 5-110 (128)
28 2kfu_A RV1827 PThr 22; FHA dom 99.8 2.5E-19 8.6E-24 165.9 13.1 99 173-289 51-149 (162)
29 3hx1_A SLR1951 protein; P74513 99.8 4.9E-19 1.7E-23 158.6 11.8 103 175-293 8-118 (131)
30 3rnr_A Stage II sporulation E 99.8 3.3E-18 1.1E-22 164.4 12.9 152 332-500 7-180 (211)
31 3els_A PRE-mRNA leakage protei 99.8 3.6E-18 1.2E-22 157.6 11.9 96 175-282 29-145 (158)
32 3oun_A Putative uncharacterize 99.8 2E-18 6.9E-23 158.6 10.1 90 177-286 67-156 (157)
33 1lgp_A Cell cycle checkpoint p 99.7 3.5E-18 1.2E-22 149.6 8.2 92 177-282 4-96 (116)
34 1dmz_A Protein (protein kinase 99.7 8.8E-18 3E-22 155.1 10.2 101 176-288 4-122 (158)
35 3elv_A PRE-mRNA leakage protei 99.7 1.9E-17 6.4E-22 157.8 12.3 97 175-283 76-193 (205)
36 2jqj_A DNA damage response pro 99.7 1.8E-17 6.1E-22 151.9 11.6 99 175-288 16-121 (151)
37 1qu5_A Protein kinase SPK1; FH 99.7 7E-18 2.4E-22 159.1 8.0 110 166-287 18-145 (182)
38 1g3g_A Protien kinase SPK1; FH 99.7 2.2E-17 7.6E-22 153.3 11.0 99 174-282 30-135 (164)
39 2csw_A Ubiquitin ligase protei 99.7 1.6E-17 5.3E-22 151.3 9.3 92 175-281 15-110 (145)
40 1gxc_A CHK2, CDS1, serine/thre 99.7 4E-17 1.4E-21 149.2 11.8 93 175-283 28-132 (149)
41 1wln_A Afadin; beta sandwich, 99.7 4.4E-17 1.5E-21 143.6 11.0 95 177-288 11-113 (120)
42 2pie_A E3 ubiquitin-protein li 99.7 9E-17 3.1E-21 145.0 13.0 92 175-281 7-102 (138)
43 1g6g_A Protein kinase RAD53; b 99.7 2.9E-16 1E-20 139.6 11.3 97 177-283 5-108 (127)
44 2ff4_A Probable regulatory pro 99.6 2.3E-15 7.8E-20 157.7 11.8 90 182-289 292-381 (388)
45 4ejq_A Kinesin-like protein KI 99.5 1.8E-14 6E-19 132.4 10.8 95 178-287 39-142 (154)
46 3fm8_A Kinesin-like protein KI 99.5 4.9E-14 1.7E-18 124.7 10.8 89 178-284 27-118 (124)
47 4a0e_A YSCD, type III secretio 99.5 9.2E-14 3.1E-18 121.8 9.0 96 176-290 3-99 (123)
48 3huf_A DNA repair and telomere 99.4 3.5E-13 1.2E-17 135.3 9.8 96 177-286 1-109 (325)
49 3uv0_A Mutator 2, isoform B; F 99.2 1.9E-11 6.5E-16 102.6 8.0 76 192-286 15-97 (102)
50 3kt9_A Aprataxin; FHA domain, 99.2 1.9E-10 6.5E-15 98.0 11.2 92 178-286 5-96 (102)
51 3i6u_A CDS1, serine/threonine- 99.1 1E-10 3.5E-15 122.8 9.7 95 175-285 8-114 (419)
52 2brf_A Bifunctional polynucleo 99.0 9E-10 3.1E-14 94.8 9.3 93 176-286 8-104 (110)
53 3t91_A Stage II sporulation pr 98.9 3.5E-09 1.2E-13 102.8 10.8 154 297-488 6-162 (242)
54 3pu9_A Protein serine/threonin 98.9 3.8E-08 1.3E-12 96.1 16.8 155 296-488 8-165 (242)
55 4egx_A Kinesin-like protein KI 98.9 8.5E-09 2.9E-13 97.1 11.1 91 178-284 69-168 (184)
56 1ujx_A Polynucleotide kinase 3 98.9 4.7E-09 1.6E-13 91.5 7.7 95 175-287 14-112 (119)
57 1yj5_C 5' polynucleotide kinas 98.8 1.2E-08 4E-13 91.1 10.0 95 175-287 7-105 (143)
58 1wv3_A Similar to DNA segregat 98.7 8.2E-09 2.8E-13 101.1 6.5 72 203-288 93-168 (238)
59 3f79_A Probable two-component 98.4 4.2E-06 1.4E-10 81.7 14.4 149 317-488 49-198 (255)
60 3zt9_A Serine phosphatase; hyd 98.1 8.5E-05 2.9E-09 69.7 16.8 148 299-488 4-151 (193)
61 3ke6_A Protein RV1364C/MT1410; 96.4 0.1 3.4E-06 54.2 17.1 137 318-489 51-190 (399)
62 3eq2_A Probable two-component 87.6 8.8 0.0003 38.8 14.5 136 333-489 201-338 (394)
63 1wv3_A Similar to DNA segregat 53.1 33 0.0011 32.6 7.6 33 203-239 22-54 (238)
64 1p9k_A ORF, hypothetical prote 30.7 34 0.0012 26.5 3.0 32 246-286 46-77 (79)
65 2l6w_A Beta-type platelet-deri 31.2 15 0.00051 25.2 0.0 20 10-29 17-36 (39)
66 2l8s_A Integrin alpha-1; trans 22.6 93 0.0032 22.9 3.8 13 15-27 21-33 (54)
67 2k1k_A Ephrin type-A receptor 21.1 85 0.0029 21.2 3.2 12 17-28 25-36 (38)
No 1
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=100.00 E-value=1.5e-32 Score=278.82 Aligned_cols=192 Identities=31% Similarity=0.484 Sum_probs=159.7
Q ss_pred eeeeeeecchhhhhcCCccCCCCceEEEEcCCCCCCCceEEEEecCCCchHHHHHHHHHHHHHHHHHHhhhhhhhhhccc
Q 010270 298 PFGVGVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQ 377 (514)
Q Consensus 298 ~~~vG~as~~~~~~r~G~R~~nED~~~v~~~~~~~~~~~lfgVfDGHGG~~aa~~as~~l~~~L~~~l~~~~~~e~~~~~ 377 (514)
.+.+|.+++ +|+|..|||++++...+ .++..+|||||||||+.+|++|++.+++.|.+.... ..
T Consensus 22 ~~~~~~~s~------~G~R~~nED~~~~~~~~--~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~--------~~ 85 (304)
T 2i0o_A 22 FLASGSSSM------QGWRISQEDAHNCILNF--DDQCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAY--------GR 85 (304)
T ss_dssp SEEEEEEEE------EESSSCCCEEEEEEEEE--ETTEEEEEEEECSSCSHHHHHHHHHHHHHHHHSHHH--------HT
T ss_pred ceEEEEeec------CCCCCCccCEEEEEecc--CCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHhhhhc--------cc
Confidence 678888888 48899999999875432 246789999999999999999999999988764211 12
Q ss_pred ccHHHHHHHHHHHHHHHhhh----------------------ccCCCceEEEEEEecCCCceEEEEEEeccceEEEEeCC
Q 010270 378 CDASDVLRDAFFQTEASMNH----------------------HYEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDG 435 (514)
Q Consensus 378 ~~i~~~L~~af~~~d~~i~~----------------------~~~G~TAtv~li~~~~~~~~~l~vANvGDSRa~L~r~g 435 (514)
.++.++|+++|..+|+.+.. ..+|||++++++..+ + +|||||||||||++|+|
T Consensus 86 ~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~--~---l~vanvGDSRa~l~r~g 160 (304)
T 2i0o_A 86 KEFEKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGK--D---LYVANAGDSRCVVCRNG 160 (304)
T ss_dssp TCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETT--E---EEEEEESSCEEEEEETT
T ss_pred ccHHHHHHHHHHHHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECC--E---EEEEEccCcEEEEEECC
Confidence 46789999999999998753 146888888887533 3 99999999999999999
Q ss_pred eEEEcCCCCCCCCHHHHHHHHHcCCCcc-cCcccccc-ccccccCCCEEeeecC------CCcccccceeeeeeeccccc
Q 010270 436 KQIKMSEDHRIASYSERLRIQETGEPLK-DGETRLCG-LNLARMLGDKFLKQQD------ARFSAEPYISPVVHIDQASK 507 (514)
Q Consensus 436 ~~~~LT~DH~~~~~~E~~RI~~agg~v~-~g~~Rv~G-L~vsRslGD~~lK~~d------g~v~seP~I~~~~~i~~~~~ 507 (514)
++++||+||++.++.|++||+++||.+. ++ |++| +.+||+|||..+|... ..|+++|+|. .+.+++.+.
T Consensus 161 ~~~~LT~DH~~~~~~e~~rI~~~gg~v~~~~--rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~pdi~-~~~l~~~D~ 237 (304)
T 2i0o_A 161 KALEMSFDHKPEDTVEYQRIEKAGGRVTLDG--RVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIE-KITVGPEDE 237 (304)
T ss_dssp EEEECCCCCCTTSHHHHHHHHHTTCCBCTTS--CBTTSCSCSBCEECGGGCCCTTSCGGGSSSBCCCEEE-EEECCTTEE
T ss_pred EEEEcCCCcCCcCHHHHHHHHhCCCEEEeCC--eEcCceeccccccCHHHccCccCCccCCeEEeeCeEE-EEEcCCCCe
Confidence 9999999999999999999999999987 55 8998 9999999999888642 2468999998 578887755
Q ss_pred ceeeecC
Q 010270 508 AFALLAR 514 (514)
Q Consensus 508 efLILA~ 514 (514)
||||||
T Consensus 238 -fllL~S 243 (304)
T 2i0o_A 238 -FMVLAC 243 (304)
T ss_dssp -EEEEEC
T ss_pred -EEEEEC
Confidence 999986
No 2
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=99.98 E-value=1.2e-32 Score=280.20 Aligned_cols=203 Identities=26% Similarity=0.342 Sum_probs=161.7
Q ss_pred eeeeeeeecchhhhhcCCccCCCCceEEEEcCCCC-CCCceEEEEecCCCchHHHHHHHHHHHHHHHH--HHhhhhh--h
Q 010270 297 IPFGVGVASDPMALRRGAKKLPMEDVCYYHWPLPG-VDKFGLFGICDGHGGSAAAKSASEILPKMVAA--ILSDSLK--R 371 (514)
Q Consensus 297 ~~~~vG~as~~~~~~r~G~R~~nED~~~v~~~~~~-~~~~~lfgVfDGHGG~~aa~~as~~l~~~L~~--~l~~~~~--~ 371 (514)
..+.+|.+++ +|+|+.|||++++...+++ ..+..+|||||||||+.+|++|++.+++.|.+ .+..... .
T Consensus 22 ~~~~~~~~s~------~G~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~ 95 (307)
T 2p8e_A 22 NGLRYGLSSM------QGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGS 95 (307)
T ss_dssp TTEEEEEEEE------EETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC-------
T ss_pred CCeeEEEEec------CCCCCcccceEEEEecCCCCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhcccccc
Confidence 3577888887 4889999999988654332 23578999999999999999999999998864 1221100 0
Q ss_pred hhhcccccHHHHHHHHHHHHHHHhhhc--------cCCCceEEEEEEecCCCceEEEEEEeccceEEEEeCCeEEEcCCC
Q 010270 372 ERLLSQCDASDVLRDAFFQTEASMNHH--------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSED 443 (514)
Q Consensus 372 e~~~~~~~i~~~L~~af~~~d~~i~~~--------~~G~TAtv~li~~~~~~~~~l~vANvGDSRa~L~r~g~~~~LT~D 443 (514)
.......++.++|+++|..+|+.+.+. .+|||++++++.. ++ +|||||||||||++|+|++.+||+|
T Consensus 96 ~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~--~~---l~vanvGDSRa~l~r~g~~~~lT~D 170 (307)
T 2p8e_A 96 ALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISP--KH---IYFINCGDSRAVLYRNGQVCFSTQD 170 (307)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECS--SE---EEEEEESSCEEEEEETTEEEEECCC
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEEC--Cc---EEEEEccCcEEEEEECCccccCCCC
Confidence 000112457889999999999998753 4688888877753 33 8999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHcCCCcccCcccccc-ccccccCCCEEeeecC------CCcccccceeeeeeecccccceeeecC
Q 010270 444 HRIASYSERLRIQETGEPLKDGETRLCG-LNLARMLGDKFLKQQD------ARFSAEPYISPVVHIDQASKAFALLAR 514 (514)
Q Consensus 444 H~~~~~~E~~RI~~agg~v~~g~~Rv~G-L~vsRslGD~~lK~~d------g~v~seP~I~~~~~i~~~~~efLILA~ 514 (514)
|++.++.|++||..+||.+... |++| +.+||+|||..+|..+ +.++++|+|. .+.+.+.++ ||||||
T Consensus 171 H~~~~~~E~~rI~~~gg~v~~~--rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~-~~~l~~~d~-~llL~S 244 (307)
T 2p8e_A 171 HKPCNPREKERIQNAGGSVMIQ--RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVY-EILRAEEDE-FIILAC 244 (307)
T ss_dssp CCTTSHHHHHHHHHTTCCEETT--EETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEE-EEECCTTEE-EEEEEC
T ss_pred CCCCCHHHHHHHHHcCCEEEeC--cccCeEeccccccCHHHhcCcccCCCCCeEeccCeEE-EEEcCCCCe-EEEEEC
Confidence 9999999999999999998865 9999 8999999999988653 2478999998 568887655 999996
No 3
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=99.98 E-value=5e-32 Score=276.62 Aligned_cols=200 Identities=24% Similarity=0.321 Sum_probs=161.9
Q ss_pred eeeeeecchhhhhcCCccCCCCceEEEEcCCCC-------------CCCceEEEEecCCCchHHHHHHHHHHHHHHHHHH
Q 010270 299 FGVGVASDPMALRRGAKKLPMEDVCYYHWPLPG-------------VDKFGLFGICDGHGGSAAAKSASEILPKMVAAIL 365 (514)
Q Consensus 299 ~~vG~as~~~~~~r~G~R~~nED~~~v~~~~~~-------------~~~~~lfgVfDGHGG~~aa~~as~~l~~~L~~~l 365 (514)
..+|+++. +|+|++|||++++...+.. ..+..+|||||||||+.++++|++.+++.|.+.+
T Consensus 9 ~~~g~~s~------~G~R~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~ 82 (316)
T 3kdj_B 9 PLYGFTSI------CGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEI 82 (316)
T ss_dssp -CEEEEEE------CTTSSSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEe------EeCCCCCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHHH
Confidence 35688887 5999999999998655322 2367899999999999999999999999998876
Q ss_pred hhhhhh--hhhcccccHHHHHHHHHHHHHHHhhhc---cCCCceEEEEEEecCCCceEEEEEEeccceEEEEeCCeEEEc
Q 010270 366 SDSLKR--ERLLSQCDASDVLRDAFFQTEASMNHH---YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKM 440 (514)
Q Consensus 366 ~~~~~~--e~~~~~~~i~~~L~~af~~~d~~i~~~---~~G~TAtv~li~~~~~~~~~l~vANvGDSRa~L~r~g~~~~L 440 (514)
...... ........++.+|.++|..++..+... .+|||++++++..+ + +|+|||||||+|++|+|++++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~GtT~~~~~i~~~--~---l~vanvGDSR~yl~r~g~~~~l 157 (316)
T 3kdj_B 83 AKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIESVAPETVGSTSVVAVVFPS--H---IFVANCGDSRAVLCRGKTALPL 157 (316)
T ss_dssp HHHCCCGGGTHHHHHHHHHHHHHHHHHHHHHGGGTSCTTCEECEEEEEECSS--E---EEEEEESSCEEEEEETTEEEES
T ss_pred HhhhcccccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCcEEEEEEECC--E---EEEEEccCCEEEEEECCEeccc
Confidence 543210 000112457899999999999998754 67888888888643 2 9999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHcCCCccc-Ccccccc-ccccccCCCEEeeecCCCcccccceeeeeeecccccceeeecC
Q 010270 441 SEDHRIASYSERLRIQETGEPLKD-GETRLCG-LNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLAR 514 (514)
Q Consensus 441 T~DH~~~~~~E~~RI~~agg~v~~-g~~Rv~G-L~vsRslGD~~lK~~dg~v~seP~I~~~~~i~~~~~efLILA~ 514 (514)
|+||++.++.|+.||..+||.+.. ...|++| +.+||++||..+|.. ++++|+|.. +.+.+.++ ||||||
T Consensus 158 T~DH~~~~~~e~~ri~~~~g~v~~~~~~r~~g~l~~sRalGd~~~~~~---~~~~pdv~~-~~~~~~~d-~llL~S 228 (316)
T 3kdj_B 158 SVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPS---IIPDPEVTA-VKRVKEDD-CLILAS 228 (316)
T ss_dssp CCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTT---SBCCCEEEE-EECCTTEE-EEEEEC
T ss_pred CCCCCCCCHHHHHHHHHcCCeEEecCCceEcceeccccccCccccCCC---cCCCCceEE-EEecCCCC-EEEEEc
Confidence 999999999999999999998862 2358999 999999999988875 899999984 45455555 999996
No 4
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=99.97 E-value=4e-32 Score=279.98 Aligned_cols=199 Identities=24% Similarity=0.313 Sum_probs=160.8
Q ss_pred eeeeecchhhhhcCCccCCCCceEEEEcCCCC------------------CCCceEEEEecCCCchHHHHHHHHHHHHHH
Q 010270 300 GVGVASDPMALRRGAKKLPMEDVCYYHWPLPG------------------VDKFGLFGICDGHGGSAAAKSASEILPKMV 361 (514)
Q Consensus 300 ~vG~as~~~~~~r~G~R~~nED~~~v~~~~~~------------------~~~~~lfgVfDGHGG~~aa~~as~~l~~~L 361 (514)
.+|.++. +|+|++|||++++...+.. ..+..||||||||||+.+|++|++.++..|
T Consensus 15 ~~G~~s~------~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l 88 (337)
T 3qn1_B 15 LWGTVSI------QGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFAL 88 (337)
T ss_dssp CEEEEEE------CTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHH
T ss_pred ceEEEEe------eeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHH
Confidence 3688887 5999999999998654211 125789999999999999999999999999
Q ss_pred HHHHhhhhhh-----hhhcccccHHHHHHHHHHHHHHHhhhc-------------------cCCCceEEEEEEecCCCce
Q 010270 362 AAILSDSLKR-----ERLLSQCDASDVLRDAFFQTEASMNHH-------------------YEGCTATVLLVWADGNANI 417 (514)
Q Consensus 362 ~~~l~~~~~~-----e~~~~~~~i~~~L~~af~~~d~~i~~~-------------------~~G~TAtv~li~~~~~~~~ 417 (514)
.+.+...... ........++++|+++|..+|..+... .+|||++++++..+ +
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~--~-- 164 (337)
T 3qn1_B 89 AEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSS--H-- 164 (337)
T ss_dssp HHHHHHTC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSS--E--
T ss_pred HHHHHhhhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECC--E--
Confidence 8876643211 001113468899999999999998753 36888888887543 3
Q ss_pred EEEEEEeccceEEEEeCCeEEEcCCCCCCCCHHHHHHHHHcCCCccc-Ccccccc-ccccccCCCEEeeecCCCcccccc
Q 010270 418 FAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKD-GETRLCG-LNLARMLGDKFLKQQDARFSAEPY 495 (514)
Q Consensus 418 ~l~vANvGDSRa~L~r~g~~~~LT~DH~~~~~~E~~RI~~agg~v~~-g~~Rv~G-L~vsRslGD~~lK~~dg~v~seP~ 495 (514)
+|||||||||+|++|+|++++||+||++.++.|+.||+.+||.+.. ...|++| +.+||++||..+|+. ++++|+
T Consensus 165 -l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~~~r~~g~l~~sRalGd~~~~~~---v~~~pd 240 (337)
T 3qn1_B 165 -IVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPY---VIPEPE 240 (337)
T ss_dssp -EEEEEESSCEEEEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTT---SBCCCE
T ss_pred -EEEEeccCcEEEEEeCCEeeeecCCCCCCCHHHHHHHHHcCCeEEecCCceecCccccccccccccccCC---CCCcce
Confidence 9999999999999999999999999999999999999999999863 2258899 999999999988765 899999
Q ss_pred eeeeeeecccccceeeecC
Q 010270 496 ISPVVHIDQASKAFALLAR 514 (514)
Q Consensus 496 I~~~~~i~~~~~efLILA~ 514 (514)
+. .+.+.+.++ ||||||
T Consensus 241 v~-~~~~~~~~d-~llL~S 257 (337)
T 3qn1_B 241 VT-FMPRSREDE-CLILAS 257 (337)
T ss_dssp EE-EEECCTTEE-EEEEEC
T ss_pred EE-EEEeCCCCC-EEEEEe
Confidence 98 556766655 999986
No 5
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=99.97 E-value=1.5e-31 Score=267.58 Aligned_cols=191 Identities=30% Similarity=0.431 Sum_probs=159.6
Q ss_pred eeeeeecchhhhhcCCccCCCCceEEEEcCCCCCCCceEEEEecCCCchHHHHHHHHHHHHHHHHHHhhhhhhhhhcccc
Q 010270 299 FGVGVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQC 378 (514)
Q Consensus 299 ~~vG~as~~~~~~r~G~R~~nED~~~v~~~~~~~~~~~lfgVfDGHGG~~aa~~as~~l~~~L~~~l~~~~~~e~~~~~~ 378 (514)
+.+|.+++ .|+|+.|||++++... .++..+|||||||||+.+|++|++.+++.|.+.+.. ..
T Consensus 8 ~~~g~~s~------~G~R~~nED~~~~~~~---~~~~~l~~V~DG~GG~~~a~~as~~~~~~l~~~~~~---------~~ 69 (274)
T 2iq1_A 8 ENVGCASQ------IGKRKENEDRFDFAQL---TDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPK---------EK 69 (274)
T ss_dssp GGCEEEEE------CCSSSSCCEEEEEEEC---SSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTT---------CC
T ss_pred CeEEEEec------ccCCCCccceEEEeeC---CCCeEEEEEECCCCCHHHHHHHHHHHHHHHHHHhcc---------cc
Confidence 45788888 4889999999988632 356789999999999999999999999988765442 24
Q ss_pred cHHHHHHHHHHHHHHHhhhc----------cCCCceEEEEEEecCCCceEEEEEEeccceEEEEeCCeEEEcCCCCCCCC
Q 010270 379 DASDVLRDAFFQTEASMNHH----------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIAS 448 (514)
Q Consensus 379 ~i~~~L~~af~~~d~~i~~~----------~~G~TAtv~li~~~~~~~~~l~vANvGDSRa~L~r~g~~~~LT~DH~~~~ 448 (514)
++.++|+++|..+++.+... .+|||++++++.. +.+ +|+|||||||+|++|+|++++||+||++.+
T Consensus 70 ~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~~~GtT~~~~~i~~-~~~---l~~anvGDSR~~l~r~g~~~~lT~DH~~~~ 145 (274)
T 2iq1_A 70 NLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRD-GIE---LVVASVGDSRAILCRKGKPMKLTIDHTPER 145 (274)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHC---CCGGGCEECEEEEEEET-TTE---EEEEEESSCEEEEEETTEEEECCCCCCTTS
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCcEEEEEEEC-CCE---EEEEEecCceEEEEeCCEeeECCCCCCCcC
Confidence 67889999999999988642 4788888888753 223 899999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCccc---Ccccccc-ccccccCCCEEeeecCCCcccccceeeeeeecccccceeeecC
Q 010270 449 YSERLRIQETGEPLKD---GETRLCG-LNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLAR 514 (514)
Q Consensus 449 ~~E~~RI~~agg~v~~---g~~Rv~G-L~vsRslGD~~lK~~dg~v~seP~I~~~~~i~~~~~efLILA~ 514 (514)
+.|+.||+++||.+.. +.+|++| +.+||++||..+|..+ ++++|++. .+.+.+.++.||||||
T Consensus 146 ~~E~~Ri~~~gG~v~~~~~~~~~~~~~~~ltralGd~~~k~~~--v~~~pdi~-~~~l~~g~d~~lll~S 212 (274)
T 2iq1_A 146 KDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSG--VIAEPETK-RIKLHHADDSFLVLTT 212 (274)
T ss_dssp HHHHHHHHHTTCCEEECTTSCEEETTTBSCSBCEECGGGTTTT--CBCCCEEE-EEECCTTTEEEEEEEC
T ss_pred HHHHHHHHHcCCEEEcCCCCceeECCeEeeccccCChhhccCC--EEeCCEEE-EEEeCCCCCcEEEEEc
Confidence 9999999999999874 3347888 9999999999998876 89999998 5688875344999986
No 6
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=99.97 E-value=4.6e-32 Score=281.73 Aligned_cols=199 Identities=19% Similarity=0.242 Sum_probs=157.0
Q ss_pred eeeeeeecchhhhhcCCccC---CCCceEEEEcCCCCCCCceEEEEecCCCchHHHHHHHHHHHHHHHH-HHhhhhhhhh
Q 010270 298 PFGVGVASDPMALRRGAKKL---PMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAA-ILSDSLKRER 373 (514)
Q Consensus 298 ~~~vG~as~~~~~~r~G~R~---~nED~~~v~~~~~~~~~~~lfgVfDGHGG~~aa~~as~~l~~~L~~-~l~~~~~~e~ 373 (514)
..++|...+..+.. .|+|. .|||++++.. ..++..||||||||||+.+|++|++.+++.|.+ .+...
T Consensus 14 ~~~~g~~~~~~~~~-~G~r~~~~~nED~~~~~~---~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~l~~~----- 84 (358)
T 2irm_A 14 QTGVGEAINQIYKD-DGRRCEGYESRDKKCLCI---SDNNTSLYAILSGHNGVTVAENALQEMAAELLLGQLNVC----- 84 (358)
T ss_dssp TEEEEEECCEEECS-SSCEEECSSCCEEEEEEE---CSSSEEEEEEEEEESCSHHHHHHHHHHHHHSSSSTTTTC-----
T ss_pred CCCCcccccceeec-CCCCCCCCCCCceEEEEE---CCCCEEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhccc-----
Confidence 34555544433333 47666 5999998753 246789999999999999999999999988754 22111
Q ss_pred hcccccHHHHHHHHHHHHHHHhhh-------------------------------------------ccCCCceEEEEEE
Q 010270 374 LLSQCDASDVLRDAFFQTEASMNH-------------------------------------------HYEGCTATVLLVW 410 (514)
Q Consensus 374 ~~~~~~i~~~L~~af~~~d~~i~~-------------------------------------------~~~G~TAtv~li~ 410 (514)
....++.++|+++|..+|+.+.. ..+||||+++++.
T Consensus 85 -~~~~~~~~~l~~a~~~~d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li~ 163 (358)
T 2irm_A 85 -NTDEAVKELIRQSFMSVEKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALIH 163 (358)
T ss_dssp -CSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEEE
T ss_pred -cchhhHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEEE
Confidence 12346788999999999987743 1378888888886
Q ss_pred ecCCCceEEEEEEeccceEEEEeC---C--eEEEcCCCCCCCCHHHHHHHHHcCCCcccCccccccccccccCCCEEeee
Q 010270 411 ADGNANIFAQCANVGDSACVMNVD---G--KQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCGLNLARMLGDKFLKQ 485 (514)
Q Consensus 411 ~~~~~~~~l~vANvGDSRa~L~r~---g--~~~~LT~DH~~~~~~E~~RI~~agg~v~~g~~Rv~GL~vsRslGD~~lK~ 485 (514)
.+. +||||||||||||+|+ | ++++||+||++.++.|++||.++||.+... |+.|..+||+|||..+|.
T Consensus 164 ~~~-----l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~--r~~g~llTRalGd~~~K~ 236 (358)
T 2irm_A 164 RSH-----LYLGNIGNCRALLCKTDEHDTLTVTQLSVDHNLLNAEEAARLFRLGLMAQNF--EGVPLYSTRCIGNYLGKA 236 (358)
T ss_dssp SSE-----EEEEEESSCEEEEEECCTTCSCEEEECSCCCBTTSHHHHHHHHTTTCCGGGG--TTCTTCBSBCEECHHHHT
T ss_pred CCE-----EEEEEcccCeEEEEEecCCCceeeEeCCCCCCCCCHHHHHHHHHcCCeEecc--CcCCEEcccCCcCHHHhc
Confidence 443 9999999999999998 8 999999999999999999999999999865 899944999999998874
Q ss_pred -----------cCCCcccccceeeeeeecccccceeeecC
Q 010270 486 -----------QDARFSAEPYISPVVHIDQASKAFALLAR 514 (514)
Q Consensus 486 -----------~dg~v~seP~I~~~~~i~~~~~efLILA~ 514 (514)
....++++|+|...+.+++.++ ||||||
T Consensus 237 ~~~~~~~~~~~~~~~v~~~Pdi~~~~~l~~~d~-fllL~S 275 (358)
T 2irm_A 237 GYKDCNFLSSATAEPVIFEPEIVGGIQITPACR-FLVLMS 275 (358)
T ss_dssp TGGGSSSSTTCSSCSSBCCCEEEEEEECCTTEE-EEEEEC
T ss_pred cccccccccccCCCCEeccCeEEEEEEeCCCCc-EEEEEC
Confidence 1124899999984368888765 999996
No 7
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=99.97 E-value=2.5e-31 Score=279.29 Aligned_cols=221 Identities=28% Similarity=0.383 Sum_probs=162.6
Q ss_pred cEEccCCCeee-----eccceeEEEeeeccceeeeeeeeeeecchhhhhcCCccCCCCceEEEEcCCCCCCCceEEEEec
Q 010270 268 PMELTSGDIIT-----LGTTSSIHVQITSETVSQIPFGVGVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGICD 342 (514)
Q Consensus 268 ~~~L~~GD~I~-----lG~~~~~~~~~~~~nq~~~~~~vG~as~~~~~~r~G~R~~nED~~~v~~~~~~~~~~~lfgVfD 342 (514)
...+.+||+|. .|+..+.+..-.+ ...--...+|.+++ .|+|+.|||++++... .++..+|||||
T Consensus 87 ~l~med~d~i~~~~~q~gg~n~~~~~g~p-~p~~~~~~~g~~s~------~G~R~~NED~~~~~~~---~~~~~l~~VaD 156 (389)
T 4da1_A 87 DLDMEDNDIIEAHREQIGGENLYFQAGKP-IPKISLENVGCASQ------IGKRKENEDRFDFAQL---TDEVLYFAVYD 156 (389)
T ss_dssp ---------------------------------CCGGGCEEEEE------CTTSSSCCEEEEEEEC---SSSEEEEEEEE
T ss_pred HcCCCCCCEeeeeeccccccccceeEcCc-CCcccceeEEEecC------CCCCCCCcceeeeeec---CCCEEEEEEEE
Confidence 35689999984 4444433322211 11112346788888 4889999999988532 35678999999
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhhhhhhhcccccHHHHHHHHHHHHHHHhhhc----------cCCCceEEEEEEec
Q 010270 343 GHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHH----------YEGCTATVLLVWAD 412 (514)
Q Consensus 343 GHGG~~aa~~as~~l~~~L~~~l~~~~~~e~~~~~~~i~~~L~~af~~~d~~i~~~----------~~G~TAtv~li~~~ 412 (514)
||||+.+|++|++.+++.+.+.+.. ..++.++|+.+|..++..+... .+|||++++++..+
T Consensus 157 G~GG~~~g~~as~~~~~~l~~~~~~---------~~~~~~~l~~a~~~~n~~i~~~~~~~~~~~~~~~GtT~~~~li~~~ 227 (389)
T 4da1_A 157 GHGGPAAADFCHTHMEKCIMDLLPK---------EKNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDG 227 (389)
T ss_dssp EESSTHHHHHHHHHHHHHHHHHTTT---------CCCHHHHHHHHHHHHHHHHHHHHHHSSCGGGGGCEECEEEEEEETT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcc---------ccCHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCeEEEEEEEcC
Confidence 9999999999999999998876543 2467889999999999988642 46888888888633
Q ss_pred CCCceEEEEEEeccceEEEEeCCeEEEcCCCCCCCCHHHHHHHHHcCCCccc---Ccccccc-ccccccCCCEEeeecCC
Q 010270 413 GNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKD---GETRLCG-LNLARMLGDKFLKQQDA 488 (514)
Q Consensus 413 ~~~~~~l~vANvGDSRa~L~r~g~~~~LT~DH~~~~~~E~~RI~~agg~v~~---g~~Rv~G-L~vsRslGD~~lK~~dg 488 (514)
.+ +|+|||||||||++|+|++++||+||++.++.|++||.++||.+.. +..|++| +.+||++||..+|+.+
T Consensus 228 -~~---l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~Ri~~~gG~v~~~~~~~~~~~g~l~ltRalGd~~~k~~~- 302 (389)
T 4da1_A 228 -IE---LVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSG- 302 (389)
T ss_dssp -TE---EEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHHTCCEECC---CCEETTTBSCSBCEECGGGGGGT-
T ss_pred -Ce---EEEEEeeccEEEEEECCEeEEeCCCCCCCCHHHHHHHHHcCCeEecccCCCccCCCeEeeEeeeCChhhccCC-
Confidence 23 8999999999999999999999999999999999999999998863 2457888 9999999999999887
Q ss_pred CcccccceeeeeeecccccceeeecC
Q 010270 489 RFSAEPYISPVVHIDQASKAFALLAR 514 (514)
Q Consensus 489 ~v~seP~I~~~~~i~~~~~efLILA~ 514 (514)
++++|++. .+.+...++.||||||
T Consensus 303 -v~~~pdi~-~~~l~~~~dd~llL~S 326 (389)
T 4da1_A 303 -VIAEPETK-RIKLHHADDSFLVLTT 326 (389)
T ss_dssp -CBCCCEEE-EEECCSSSCEEEEEEC
T ss_pred -CCCCCceE-EEEEcCCCCcEEEEEe
Confidence 89999998 5678776455999996
No 8
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=99.97 E-value=1.2e-31 Score=281.20 Aligned_cols=199 Identities=26% Similarity=0.342 Sum_probs=161.3
Q ss_pred eeeeeeecchhhhhcCCccCCCCceEEEEcCCCC-CCCceEEEEecCCCchHHHHHHHHHHHHHHHH--HHhhhhhhhhh
Q 010270 298 PFGVGVASDPMALRRGAKKLPMEDVCYYHWPLPG-VDKFGLFGICDGHGGSAAAKSASEILPKMVAA--ILSDSLKRERL 374 (514)
Q Consensus 298 ~~~vG~as~~~~~~r~G~R~~nED~~~v~~~~~~-~~~~~lfgVfDGHGG~~aa~~as~~l~~~L~~--~l~~~~~~e~~ 374 (514)
.+.+|.+++ +|+|..|||++++...+++ ..+..+|||||||||+.+|++|++.+++.|.+ .+.... ..
T Consensus 21 ~l~~g~~s~------~G~R~~nEDa~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~~---~~ 91 (382)
T 1a6q_A 21 GLRYGLSSM------QGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSA---GA 91 (382)
T ss_dssp TEEEEEEEE------EETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSS---SS
T ss_pred ceEEEEEec------CCCCCCCCceeEEecCCCCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHhhhhhhccC---CC
Confidence 567788887 4889999999988654432 23578999999999999999999999998864 122110 00
Q ss_pred cccccHHHHHHHHHHHHHHHhhhc--------cCCCceEEEEEEecCCCceEEEEEEeccceEEEEeCCeEEEcCCCCCC
Q 010270 375 LSQCDASDVLRDAFFQTEASMNHH--------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRI 446 (514)
Q Consensus 375 ~~~~~i~~~L~~af~~~d~~i~~~--------~~G~TAtv~li~~~~~~~~~l~vANvGDSRa~L~r~g~~~~LT~DH~~ 446 (514)
.....+.++|+++|..+|+.+... .+|||++++++..+ + +|||||||||||++|+|++++||+||++
T Consensus 92 ~~~~~~~~~l~~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~~~--~---l~vanvGDSRayl~r~g~~~~LT~DHs~ 166 (382)
T 1a6q_A 92 PSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQ--H---TYFINCGDSRGLLCRNRKVHFFTQDHKP 166 (382)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSS--E---EEEEEESSCEEEEEETTEEEEECCCCCT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCcceEEEEEEECC--e---EEEEEcCCCeEEEEECCceEEeCCCCCC
Confidence 112457889999999999988653 46888888877533 3 9999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCcccCcccccc-ccccccCCCEEeeecC------CCcccccceeeeeeec-ccccceeeecC
Q 010270 447 ASYSERLRIQETGEPLKDGETRLCG-LNLARMLGDKFLKQQD------ARFSAEPYISPVVHID-QASKAFALLAR 514 (514)
Q Consensus 447 ~~~~E~~RI~~agg~v~~g~~Rv~G-L~vsRslGD~~lK~~d------g~v~seP~I~~~~~i~-~~~~efLILA~ 514 (514)
.++.|++||..+||.+... |++| +.+||+|||..+|..+ +.++++|+|. .+.+. +.++ ||||||
T Consensus 167 ~~~~E~~RI~~~gg~v~~~--Rv~g~l~ltRalGd~~~K~~~~~~~~~~~v~~~Pdv~-~~~l~~~~dd-~llLaS 238 (382)
T 1a6q_A 167 SNPLEKERIQNAGGSVMIQ--RVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVH-DIERSEEDDQ-FIILAC 238 (382)
T ss_dssp TSHHHHHHHHHTTCCEETT--EETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEE-EEECCTTTEE-EEEEEC
T ss_pred CCHHHHHHHHhcCcEEecc--cccCceeeeeecCcHhhcccccCCCccCeeeeeeeEE-EEEccCCCCe-EEEEec
Confidence 9999999999999999865 9999 9999999999988654 2578999998 56787 5555 999996
No 9
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=99.97 E-value=7.6e-31 Score=268.22 Aligned_cols=204 Identities=19% Similarity=0.285 Sum_probs=159.0
Q ss_pred eeeeeeecchhhhhcCCccCCCCceEEEEcCC-CCCCCceEEEEecCCCchHHHHHHHHHHHHHHHHH--Hhhhhhh---
Q 010270 298 PFGVGVASDPMALRRGAKKLPMEDVCYYHWPL-PGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAI--LSDSLKR--- 371 (514)
Q Consensus 298 ~~~vG~as~~~~~~r~G~R~~nED~~~v~~~~-~~~~~~~lfgVfDGHGG~~aa~~as~~l~~~L~~~--l~~~~~~--- 371 (514)
.+.+|++++ .|+|+.|||++++.... ++..+..+|||||||||+.+|++|++.+++.|.+. +......
T Consensus 21 ~~~~~~~s~------~G~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~~~~~~~l~~ 94 (324)
T 2i44_A 21 AFDAAIFTD------IGGRKHQEDRFTLCPQLVPGRDDCAFFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEMLRS 94 (324)
T ss_dssp TEEEEEEEE------CTTSSSCCEEEEEESCCSTTCSSEEEEEEEEEESSSHHHHHHHHHHHHHHHTCHHHHHHHHHHTS
T ss_pred ceEEEEEEC------CCCCCccCCeEEEEecCCCCCCCeEEEEEeCCCCchHHHHHHHHHHHHHHHhhhHHHHHHHHhhc
Confidence 577888888 48899999999987432 33567899999999999999999999999998762 2211000
Q ss_pred -----h-hhcccccHHHHHHHHHHHHHHHhhhc-------cCCCceEEEEEEecCCCceEEEEEEeccceEEEEeC---C
Q 010270 372 -----E-RLLSQCDASDVLRDAFFQTEASMNHH-------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVD---G 435 (514)
Q Consensus 372 -----e-~~~~~~~i~~~L~~af~~~d~~i~~~-------~~G~TAtv~li~~~~~~~~~l~vANvGDSRa~L~r~---g 435 (514)
+ ......++.++|+++|..+|+.+.+. ..|||+|++++.. ++ +|||||||||||++++ |
T Consensus 95 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~~~i~~--~~---l~vanvGDSRa~l~r~~~~g 169 (324)
T 2i44_A 95 DVPATEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTAVLAK--GF---VAVGHLGDSRIAMGVETPNG 169 (324)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEEEEEET--TE---EEEEEESSCEEEEEEEETTE
T ss_pred cCCccccccccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEEC--Ce---EEEEEccCceEEEEeccCCC
Confidence 0 00012457889999999999988643 4689999888543 33 9999999999999986 7
Q ss_pred -eEEEcCCCCCCCCHHHHHHHHHcCCCcc------cCcccccc-ccccccCCC----EEeeec-------CCCcccccce
Q 010270 436 -KQIKMSEDHRIASYSERLRIQETGEPLK------DGETRLCG-LNLARMLGD----KFLKQQ-------DARFSAEPYI 496 (514)
Q Consensus 436 -~~~~LT~DH~~~~~~E~~RI~~agg~v~------~g~~Rv~G-L~vsRslGD----~~lK~~-------dg~v~seP~I 496 (514)
++++||.||++.++.|++||.++||.+. ....+..| ++++|++|| ..+|.. ...++++|+|
T Consensus 170 ~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~~~~~~~~~g~l~~sra~Gd~p~~~~~~~~~g~~~~~~~~v~~~pdv 249 (324)
T 2i44_A 170 LNCEFLTVDHKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPDV 249 (324)
T ss_dssp EEEEESCCCCCTTSHHHHHHHHHTTCEEECCTTCTTSCEEECTTHHHHHHTTCCCCCBSSSBCEECGGGTTTTCBCCCEE
T ss_pred ceEEECCCCCCCcCHHHHHHHHHcCCEEEecccccCCCccccCcccchhhcCCccccceeccccCCccccCCeEeecCEE
Confidence 8999999999999999999999999883 12235567 999999999 555432 2247899999
Q ss_pred eeeeeecccccceeeecC
Q 010270 497 SPVVHIDQASKAFALLAR 514 (514)
Q Consensus 497 ~~~~~i~~~~~efLILA~ 514 (514)
. .+.+++.++ ||||||
T Consensus 250 ~-~~~l~~~d~-~llLaS 265 (324)
T 2i44_A 250 R-VVRVTPQHR-VMILAT 265 (324)
T ss_dssp E-EEECCTTEE-EEEEEC
T ss_pred E-EEEcCCCCe-EEEEEc
Confidence 8 578888876 999997
No 10
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=99.97 E-value=5.4e-31 Score=282.67 Aligned_cols=197 Identities=29% Similarity=0.372 Sum_probs=154.9
Q ss_pred eeecchhhhhcCCccCCCCceEEEEcCCCCCCCceEEEEecCCCchHHHHHHHHHHHHHHHHHH------hhh---hh--
Q 010270 302 GVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAIL------SDS---LK-- 370 (514)
Q Consensus 302 G~as~~~~~~r~G~R~~nED~~~v~~~~~~~~~~~lfgVfDGHGG~~aa~~as~~l~~~L~~~l------~~~---~~-- 370 (514)
++.+++ ++.|..|||++.+...+ ..+..||||||||||+.+|++|+++++..|...+ ... ..
T Consensus 40 ~~~s~~-----g~~R~~nED~~~v~~~~--~~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~ 112 (467)
T 2pnq_A 40 GFDSNR-----LPANAPIEDRRSATTCL--QTRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESG 112 (467)
T ss_dssp EEEEEE-----ECCSSSCCEEEEEEEES--SSSCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC--
T ss_pred EEEeec-----cCCCCCCCCceeeeecc--CCCcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhcc
Confidence 455554 68999999999876433 2356899999999999999999999999987643 110 00
Q ss_pred --------------------------------hhh--hc-----ccccHHHHHHHHHHHHHHHhhhc-------------
Q 010270 371 --------------------------------RER--LL-----SQCDASDVLRDAFFQTEASMNHH------------- 398 (514)
Q Consensus 371 --------------------------------~e~--~~-----~~~~i~~~L~~af~~~d~~i~~~------------- 398 (514)
+.. .. ...++.++|++||..+|+.+...
T Consensus 113 ~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~ 192 (467)
T 2pnq_A 113 RALLPILQWHKHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYL 192 (467)
T ss_dssp --CCCCEEECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHH
T ss_pred ccccccccccccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccccc
Confidence 000 00 11268899999999999887532
Q ss_pred -----cCCCceEEEEEEecCCCceEEEEEEeccceEEEEe---CC--eEEEcCCCCCCCCHHHHHHHHHcCCCc------
Q 010270 399 -----YEGCTATVLLVWADGNANIFAQCANVGDSACVMNV---DG--KQIKMSEDHRIASYSERLRIQETGEPL------ 462 (514)
Q Consensus 399 -----~~G~TAtv~li~~~~~~~~~l~vANvGDSRa~L~r---~g--~~~~LT~DH~~~~~~E~~RI~~agg~v------ 462 (514)
.+||||+++++..+. +||||||||||||++ +| ++++||.||++.++.|++||.++|+..
T Consensus 193 ~~~~~~~GtTa~v~li~~~~-----l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~ 267 (467)
T 2pnq_A 193 VLRVAFSGATACVAHVDGVD-----LHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVV 267 (467)
T ss_dssp HHHHHHSEECEEEEEEETTE-----EEEEEESSCEEEEEEECTTSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHB
T ss_pred cccCCCCcceEEEEEEECCE-----EEEEECCCceEEEEEecCCCcEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeE
Confidence 579999999986443 999999999999998 47 899999999999999999999998643
Q ss_pred ccCcccccc-ccccccCCCEEeeec------------------------------CCCcccccceeeeeeecccccceee
Q 010270 463 KDGETRLCG-LNLARMLGDKFLKQQ------------------------------DARFSAEPYISPVVHIDQASKAFAL 511 (514)
Q Consensus 463 ~~g~~Rv~G-L~vsRslGD~~lK~~------------------------------dg~v~seP~I~~~~~i~~~~~efLI 511 (514)
.++ |++| +.+||+|||..+|.. .++++++|+|. .+.+++.++ |||
T Consensus 268 ~~~--Rv~G~l~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~-~~~l~~~D~-fLV 343 (467)
T 2pnq_A 268 KQD--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVT-YHRLRPQDK-FLV 343 (467)
T ss_dssp SSS--SBTTTBSSSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEE-EEECCTTEE-EEE
T ss_pred ecC--ccccccccchhcCchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEE-EEEcCCCCe-EEE
Confidence 344 8999 999999999987731 13589999998 578988765 999
Q ss_pred ecC
Q 010270 512 LAR 514 (514)
Q Consensus 512 LA~ 514 (514)
|||
T Consensus 344 LaS 346 (467)
T 2pnq_A 344 LAT 346 (467)
T ss_dssp EEC
T ss_pred EEe
Confidence 996
No 11
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=99.97 E-value=3.2e-31 Score=277.38 Aligned_cols=196 Identities=19% Similarity=0.253 Sum_probs=159.0
Q ss_pred eeeeeeecchhhhhcCCccCCCC-----ceEEEEcCCCCCCCceEEEEecCCCchHHHHHHHHHHHHHHHHHHhhhhhhh
Q 010270 298 PFGVGVASDPMALRRGAKKLPME-----DVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRE 372 (514)
Q Consensus 298 ~~~vG~as~~~~~~r~G~R~~nE-----D~~~v~~~~~~~~~~~lfgVfDGHGG~~aa~~as~~l~~~L~~~l~~~~~~e 372 (514)
.+.+|.+++ .|+|+.|| |++++...+.+.++..||||||||||+.+|++|++++++.|.+..
T Consensus 12 ~~~~~~~s~------~G~R~~~ED~~neD~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~------- 78 (377)
T 3d8k_A 12 RTVCASATS------RNRRPTSESPHSDDVVVVEGMLRGRPETRVHAMFDGFQGRHSAMWLAQNVMNYLNDLR------- 78 (377)
T ss_dssp HHHHHHTTT------CEEEEEECC---CEEEEEEEECSSCTTEEEEEEEEBSSSSHHHHHHHHHHHHHHTTCS-------
T ss_pred cEEEEEEEc------cCCCCccccchhcceEEEecccCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHHhc-------
Confidence 355666666 58899875 555565445556788999999999999999999999998885421
Q ss_pred hhcccccHHHHHHHHHHHHHHHhhhc--cCCCceEEEEEEecCC------------------------------------
Q 010270 373 RLLSQCDASDVLRDAFFQTEASMNHH--YEGCTATVLLVWADGN------------------------------------ 414 (514)
Q Consensus 373 ~~~~~~~i~~~L~~af~~~d~~i~~~--~~G~TAtv~li~~~~~------------------------------------ 414 (514)
....++|+++|..+|+.+... .+|||++++++....+
T Consensus 79 -----~~~~~al~~af~~~d~~l~~~~~~~GtTa~~~~i~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~val 153 (377)
T 3d8k_A 79 -----DVNEEEITRQFERMDGDLRAANLPGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVAM 153 (377)
T ss_dssp -----SSSHHHHHHHHHHHHHHHHHHTCCCCBCEEEEEEEEESSCCCEEEETTEEECCC---CCCHHHHSSCCCCCCEEE
T ss_pred -----ccHHHHHHHHHHHHHHHHHhcccCCCCceEEEEEeccccccccccccccccccccccccccccccccccccceee
Confidence 124788999999999999876 6899999988853210
Q ss_pred ----------CceEEEEEEeccceEEEEeCCeEEEcCCCCCCCCHHHHHHHHHcCCCcc--cCcccccc-ccccccCCCE
Q 010270 415 ----------ANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLK--DGETRLCG-LNLARMLGDK 481 (514)
Q Consensus 415 ----------~~~~l~vANvGDSRa~L~r~g~~~~LT~DH~~~~~~E~~RI~~agg~v~--~g~~Rv~G-L~vsRslGD~ 481 (514)
+...+|||||||||||++|+|++++||+||++.++.|+.||+++||.+. ++.+|++| |++||+|||.
T Consensus 154 i~~~~p~~~~~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~~g~~rv~G~l~vtRalGd~ 233 (377)
T 3d8k_A 154 NFRRDPRAAKGIYTIHVASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTTVNGELLLGGVVPMTRAFGSF 233 (377)
T ss_dssp CGGGCGGGTTCEEEEEEEEESSCEEEEEETTEEEESSCCCSSSSHHHHHHHHTTTCCEEECSSSEEETTTBSCSBCSSCG
T ss_pred ecccccccccCCCeEEEEEcccceEEEEECCEEEECCcCCCCCCHHHHHHHHHcCCEEEecCCcEEEcCceecceeecCh
Confidence 0124899999999999999999999999999999999999999999986 56679999 9999999999
Q ss_pred EeeecC------CCcccccceeeeeeecccccceeeecC
Q 010270 482 FLKQQD------ARFSAEPYISPVVHIDQASKAFALLAR 514 (514)
Q Consensus 482 ~lK~~d------g~v~seP~I~~~~~i~~~~~efLILA~ 514 (514)
.+|... +.++++|+|. .+.+++.+ ||||||
T Consensus 234 ~~k~~~~~~~~~~~v~~~Pdv~-~~~l~~~D--~llL~S 269 (377)
T 3d8k_A 234 DFKKGGQGKLQQDLVSAVPDVT-TFFAYPGD--DIVAGT 269 (377)
T ss_dssp GGSCC---CCSSCSSBCCCEEE-EEEECTTC--EEEEEC
T ss_pred hhhcccccccccCccccCCcEE-EEEcCCCC--EEEEEE
Confidence 887532 2588999998 56888864 899986
No 12
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=99.97 E-value=9e-31 Score=272.81 Aligned_cols=195 Identities=21% Similarity=0.269 Sum_probs=155.0
Q ss_pred eeeeeecchhhhhcCCccCCCCceEEEEcCCCCCCCceEEEEecCCCchHHHHHHHHHHHHHHHHHHhhhhhhhhhcccc
Q 010270 299 FGVGVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQC 378 (514)
Q Consensus 299 ~~vG~as~~~~~~r~G~R~~nED~~~v~~~~~~~~~~~lfgVfDGHGG~~aa~~as~~l~~~L~~~l~~~~~~e~~~~~~ 378 (514)
..+|.+++ .|+|+.|||++++...+...++..||||||||||+.+|++|+++++..|.+. . .
T Consensus 13 ~~~~~~s~------~G~R~~nED~~~v~~~~~~~~~~~lf~VfDGHGG~~as~~a~~~l~~~l~~~----~--------~ 74 (364)
T 2isn_A 13 TTTVAATM------LGRRPTDEDAILVSAPATSRPNVRIKAVFDGHAGEATSQYCAKHAAKHLGKL----S--------E 74 (364)
T ss_dssp EEEEEEEE------CTTSSSCCEEEEEECC----CCEEEEEEEEEESCSHHHHHHHHHHHHHHTTC----S--------S
T ss_pred eEEEEEEc------CCCCCcCCCeeEEeccCCCCCCeEEEEEEECCCCHHHHHHHHHHHHHHHHHh----h--------c
Confidence 45666776 4899999999999877666678899999999999999999999998877431 0 1
Q ss_pred cHHHHHHHHHHHHHHHhhhc-----cCCCceEEEEEEecC----------------------------------------
Q 010270 379 DASDVLRDAFFQTEASMNHH-----YEGCTATVLLVWADG---------------------------------------- 413 (514)
Q Consensus 379 ~i~~~L~~af~~~d~~i~~~-----~~G~TAtv~li~~~~---------------------------------------- 413 (514)
...+.|+++|..+|+.+... ..|||++++++....
T Consensus 75 ~~~~~l~~a~~~~d~~i~~~~~~~~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~ 154 (364)
T 2isn_A 75 FTFAEVKKACLSLDAEIIRKLGPKHVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLIQEEEEAEHPELV 154 (364)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCSSSCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCHHHHHHHHHHC-----C
T ss_pred ccHHHHHHHHHHHHHHHHHhcccCCCCCcceehhhhhccccccccccccccccccccccchhhhhhhhhhhhhccccccc
Confidence 12567899999999988643 578999988885300
Q ss_pred ---------------CCceEEEEEEeccceEEEE-eCCeEEEcCCCCCCCCHHHHHHHHHcCCCccc-Ccccccc-cccc
Q 010270 414 ---------------NANIFAQCANVGDSACVMN-VDGKQIKMSEDHRIASYSERLRIQETGEPLKD-GETRLCG-LNLA 475 (514)
Q Consensus 414 ---------------~~~~~l~vANvGDSRa~L~-r~g~~~~LT~DH~~~~~~E~~RI~~agg~v~~-g~~Rv~G-L~vs 475 (514)
.....+|||||||||||++ ++|++++||+||++.++.|+.||+++||.+.. +.+|+.| |++|
T Consensus 155 ~~~~~~~~~~~~~~~~g~~~l~vanvGDSRayl~~r~g~~~~LT~DH~~~~~~e~~rI~~~gG~v~~~~~~rv~g~l~lt 234 (364)
T 2isn_A 155 GRYPRVPDVQQKTIPAGSFLVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVETFDVPRVDGVLALS 234 (364)
T ss_dssp CSSCCCCCCEEEEECTTCEEEEEEEESSCEEEEECTTSCEEECCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCS
T ss_pred ccccccccccccccccCccEEEEEECccCEEEEEeeCCEEEEcCcCCCCCCHHHHHHHHHcCCeEecCCCcccCCceeeE
Confidence 0012489999999999999 79999999999999999999999999998864 4568888 8999
Q ss_pred ccCCCEEeeecC------CCcccccceeeeeeecccccceeeecC
Q 010270 476 RMLGDKFLKQQD------ARFSAEPYISPVVHIDQASKAFALLAR 514 (514)
Q Consensus 476 RslGD~~lK~~d------g~v~seP~I~~~~~i~~~~~efLILA~ 514 (514)
|+|||..+|... ..++++|+|. .+.+++. + ||||||
T Consensus 235 RalGd~~~k~~~~l~~~~~~v~~~Pdv~-~~~l~~~-D-~llL~S 276 (364)
T 2isn_A 235 RAFGDSDFKMNPNLPPEEQKVIAVPDVR-QFYALSS-D-LLLLAC 276 (364)
T ss_dssp BCEECGGGSCCCSSCGGGSSSBCCCEEE-EEEECTT-C-EEEEEC
T ss_pred EEecchhhccccccCcccCceEEEeEEE-EEECCCC-C-EEEEEc
Confidence 999999887532 2478999998 5678775 4 999986
No 13
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=99.97 E-value=2.6e-31 Score=280.23 Aligned_cols=202 Identities=22% Similarity=0.267 Sum_probs=153.2
Q ss_pred eeeeeeecchhhhhc--CCccCCCCceEEEEcCCCCCCCceEEEEecCCCchHHHHHHHHHHHHHHHH-HHhhhhhhhhh
Q 010270 298 PFGVGVASDPMALRR--GAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAA-ILSDSLKRERL 374 (514)
Q Consensus 298 ~~~vG~as~~~~~~r--~G~R~~nED~~~v~~~~~~~~~~~lfgVfDGHGG~~aa~~as~~l~~~L~~-~l~~~~~~e~~ 374 (514)
.+++|+++.+..+.. +..|..|||++++.. ...+..||||||||||+.+|++|+++++..|.+ .+...
T Consensus 26 ~~~~G~~~~~G~r~~g~~~~r~~nED~~~~~~---~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~------ 96 (401)
T 2j4o_A 26 LSGVGSASNRSYSADGKGTESHPPEDSWLKFR---SENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAE------ 96 (401)
T ss_dssp TEEEEEECCEEECSSSSCEECCCCCEEEEEEE---ETTTEEEEEEEEEESSSHHHHHHHHHHHHTTSSSSCCTT------
T ss_pred cCceeEEecccccccccccCCCCCCceEEEec---CCCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhhcc------
Confidence 567888876421110 112236999998753 246788999999999999999999999887743 11110
Q ss_pred cccccHHHHHHHHHHHHHHHhhh------------------------------------------ccCCCceEEEEEEec
Q 010270 375 LSQCDASDVLRDAFFQTEASMNH------------------------------------------HYEGCTATVLLVWAD 412 (514)
Q Consensus 375 ~~~~~i~~~L~~af~~~d~~i~~------------------------------------------~~~G~TAtv~li~~~ 412 (514)
....++.++|+++|..++..+.+ ..+||||+++++..+
T Consensus 97 ~~~~~~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~~li~~~ 176 (401)
T 2j4o_A 97 HAEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNN 176 (401)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHHHHHHCCEEEEEEEEEETT
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccchhhhhhhcccccCCCccCEEEEEEECC
Confidence 11245788888999888766532 147899999988643
Q ss_pred CCCceEEEEEEeccceEEEEeCC----eEEEcCCCCCCCCHHHHHHHHHcCCCccc-Ccccccc-ccccccCCCEEeeec
Q 010270 413 GNANIFAQCANVGDSACVMNVDG----KQIKMSEDHRIASYSERLRIQETGEPLKD-GETRLCG-LNLARMLGDKFLKQQ 486 (514)
Q Consensus 413 ~~~~~~l~vANvGDSRa~L~r~g----~~~~LT~DH~~~~~~E~~RI~~agg~v~~-g~~Rv~G-L~vsRslGD~~lK~~ 486 (514)
. +|||||||||||++|++ ++++||.||++.++.|++||.++||.+.. ...|++| +.+||+|||..+|..
T Consensus 177 ~-----l~vanvGDSRa~l~r~~~~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~r~~g~l~vtRalGd~~~k~~ 251 (401)
T 2j4o_A 177 K-----LYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQESTRRIGDYKVKYG 251 (401)
T ss_dssp E-----EEEEEESSCEEEEEEECSSSEEEEECSCCCSTTSHHHHHHHHTTTCCHHHHHHHCCBTTBCCSBCEECHHHHHS
T ss_pred E-----EEEEEccCceEEEEEcCCCCceEEECCCCCCCCCHHHHHHHHHcCCCeeeccCccccCCcccccccCCHhhccc
Confidence 3 99999999999999988 99999999999999999999999998631 1126777 999999999988742
Q ss_pred -----------CCCcccccceeeeeeecccccceeeecC
Q 010270 487 -----------DARFSAEPYISPVVHIDQASKAFALLAR 514 (514)
Q Consensus 487 -----------dg~v~seP~I~~~~~i~~~~~efLILA~ 514 (514)
...++++|+|...+.+++.++ ||||||
T Consensus 252 ~~~~~~~~~~~~~~v~~~Pdv~~~~~l~~~d~-flvLaS 289 (401)
T 2j4o_A 252 YTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTG-FLVLMS 289 (401)
T ss_dssp GGGSTTTTTCSSCSSBCCCEEEEEEECTTCCE-EEEEEC
T ss_pred ccccccccccCCCCeeccceEEEeEEeCCCCc-EEEEEc
Confidence 125899999984368887665 999996
No 14
>1mzk_A Kinase associated protein phosphatase; beta sandwich, hydrolase; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.92 E-value=5e-25 Score=199.52 Aligned_cols=136 Identities=65% Similarity=1.041 Sum_probs=106.2
Q ss_pred CCceEEEEEEeCCCCCeEEEcccCCCCCCcEEEcCCCCCCeEeCCcccccceeEEEEeCCcceEEEEeCCCCCceeeCCe
Q 010270 174 QRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQ 253 (514)
Q Consensus 174 ~~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~Dl~StNGT~vNg~ 253 (514)
...++.|.++.|+..|..|.+......+.+++|||.++|||+|+|+.|||+||+|.++.+++.|+|+|++|+|||||||+
T Consensus 4 ~~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~i~~~~~~~~~~l~DlgS~NGT~vNg~ 83 (139)
T 1mzk_A 4 GSSWLFLEVIAGPAIGLQHAVNSTSSSKLPVKLGRVSPSDLALKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLVNSH 83 (139)
T ss_dssp CSEEEEEEECSSTTCSCEEEECTTCSTTCSEEEESSSSCSEECCCTTSSSEEEEEEEETTTTEEEEEETTCSSCCEETTE
T ss_pred CCCeEEEEEEeCCCCCeEEEecCCCCccceEEeeCCCCCCEEeCCCCCChHHcEEEEECCCCEEEEEECCCCCCEEECCE
Confidence 35578999999999999999988533334789999999999999999999999999998645799999999999999999
Q ss_pred ecCCCCCCCCCCCCcEEccCCCeeeeccceeEEEeeeccceeeeeeeeeeecchhh
Q 010270 254 PINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITSETVSQIPFGVGVASDPMA 309 (514)
Q Consensus 254 ~i~~p~~~~~~~g~~~~L~~GD~I~lG~~~~~~~~~~~~nq~~~~~~vG~as~~~~ 309 (514)
++.+|+...+..+.++.|++||+|+||.+.+.|+.+..++++++|+++|.|+|+|+
T Consensus 84 ~i~~~~~~~~~~~~~~~L~~GD~I~iG~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 139 (139)
T 1mzk_A 84 SISHPDLGSRKWGNPVELASDDIITLGTTTKVYVRISSQNEFQIPFKIGVASDPMA 139 (139)
T ss_dssp ESSCCCTTTCCCCCCEECCTTEEEECSSSCEEEEEEEECCC---------------
T ss_pred ECcCcccccccCCceEECCCCCEEEECCEEEEEEEcCCCccccCCCCcccccccCC
Confidence 99865544455567899999999999999999999998888899999999999764
No 15
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=99.91 E-value=3.9e-24 Score=209.80 Aligned_cols=182 Identities=15% Similarity=0.185 Sum_probs=137.2
Q ss_pred eeeeeeecchhhhhcCCc-cCCCCceEEEEcCCCCCCCceEEEEecCCCchHHHHHHHHHHHHHHH-HHHhhhhhhhhhc
Q 010270 298 PFGVGVASDPMALRRGAK-KLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVA-AILSDSLKRERLL 375 (514)
Q Consensus 298 ~~~vG~as~~~~~~r~G~-R~~nED~~~v~~~~~~~~~~~lfgVfDGHGG~~aa~~as~~l~~~L~-~~l~~~~~~e~~~ 375 (514)
.+.+|.+++ .|+ |+.|||++++.... ++..+|+|||||||+.+|+++|+.+.+.|. +.+.....
T Consensus 5 ~~~~~~~s~------~G~~r~~neD~~~~~~~~---~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~----- 70 (250)
T 2pk0_A 5 YMEISLLTD------IGQRRSNNQDFINQFENK---AGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFS----- 70 (250)
T ss_dssp CEEEEEEEE------CCTTCSCCCEEEEEEECT---TCCEEEEEEEEECTTTHHHHHHHHHHHHHHHHHTTCCCC-----
T ss_pred eEEEEEecC------CCCCCCcCCCceEeccCC---CCcEEEEEEeCCCCcHHHHHHHHHHHHHHHHHHhhcccC-----
Confidence 467888888 477 99999999886542 467899999999999999999999999998 44332110
Q ss_pred ccccHHHHHHHHHHHHHHHhhhc-------cCCCceEEEEEEecCCCceEEEEEEeccceEEEEeCCeEEEcCCCCCCCC
Q 010270 376 SQCDASDVLRDAFFQTEASMNHH-------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIAS 448 (514)
Q Consensus 376 ~~~~i~~~L~~af~~~d~~i~~~-------~~G~TAtv~li~~~~~~~~~l~vANvGDSRa~L~r~g~~~~LT~DH~~~~ 448 (514)
...++.++|.++|..+++.+... ..|||++++++. .++ +++||+||||+|++|+|+.++||.||++.+
T Consensus 71 ~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~--~~~---l~~anvGDsr~~l~r~g~~~~lt~dh~~~~ 145 (250)
T 2pk0_A 71 ELSEIRDWMLVSIETENRKIYELGQSDDYKGMGTTIEAVAIV--GDN---IIFAHVGDSRIGIVRQGEYHLLTSDHSLVN 145 (250)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEECEEEEEEE--TTE---EEEEEESSCEEEEEETTEEEECCCCCBHHH
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhhCCCCCCcceEEEEEEE--CCe---EEEEEeCCCeEEEEcCCcEEEeCCCCCHHH
Confidence 12356788999999999888754 257777777775 333 899999999999999999999999999975
Q ss_pred HHHHHHHHHcCCCcccCcccccc-ccccccCCCEEeeecCCCcccccceeeeeeecccccceeeecC
Q 010270 449 YSERLRIQETGEPLKDGETRLCG-LNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLAR 514 (514)
Q Consensus 449 ~~E~~RI~~agg~v~~g~~Rv~G-L~vsRslGD~~lK~~dg~v~seP~I~~~~~i~~~~~efLILA~ 514 (514)
+. .+.|.....+.....+ +.+||++||.. .++|++. .+.+.+.+ +|||||
T Consensus 146 ~~-----~~~g~i~~~~~~~~~~~~~ltralG~~~--------~~~p~~~-~~~l~~gd--~lll~S 196 (250)
T 2pk0_A 146 EL-----VKAGQLTEEEAASHPQKNIITQSIGQAN--------PVEPDLG-VHLLEEGD--YLVVNS 196 (250)
T ss_dssp HH-----HHTTSSCHHHHHTCCSCCCBSCCBSCSS--------CCCCEEE-EEECCTTC--EEEEEC
T ss_pred HH-----HHcCCCCHHHHHhCCCcceEEeecCCCC--------CccceEE-EEEcCCCC--EEEEEC
Confidence 43 3445443322112334 78999999952 4679997 56787753 899986
No 16
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=99.90 E-value=4.3e-23 Score=200.96 Aligned_cols=181 Identities=23% Similarity=0.284 Sum_probs=125.6
Q ss_pred eeeeecchhhhhcCCc-cCCCCceEEEEcCCCCCCCceEEEEecCCCchHHHHHHHHHHHHHHHHHHhhhhhhhhhcccc
Q 010270 300 GVGVASDPMALRRGAK-KLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQC 378 (514)
Q Consensus 300 ~vG~as~~~~~~r~G~-R~~nED~~~v~~~~~~~~~~~lfgVfDGHGG~~aa~~as~~l~~~L~~~l~~~~~~e~~~~~~ 378 (514)
.+|.+++ .|+ |+.|||++ +... .... +|+|||||||+.+|+++|+.+.+.+.+.+...... ...
T Consensus 2 ~~~~~s~------~G~~r~~neD~~-~~~~---~~~~-~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~----~~~ 66 (240)
T 2j82_A 2 DVAGLTD------CGLIRKSNQDAF-YIDE---KHQR-FFIVADGMGGHAGGEEASRLAVDHIRQYLETHLED----LQH 66 (240)
T ss_dssp EEEEEEE------CCSSCSSCCEEE-EECT---TTCC-EEEEEEBC---CHHHHHHHHHHHHHHHHHHHHHHH----HTT
T ss_pred eEEEeCC------CCCCCCcCCCcc-EecC---CCCe-EEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcccc----cch
Confidence 4677777 477 99999999 6533 1334 99999999999999999999999998766543211 024
Q ss_pred cHHHHHHHHHHHHHHHhhhc--------cCCCceEEEEEEecCCCceEEEEEEeccceEEEEeCCeEEEcCCCCCCCCHH
Q 010270 379 DASDVLRDAFFQTEASMNHH--------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYS 450 (514)
Q Consensus 379 ~i~~~L~~af~~~d~~i~~~--------~~G~TAtv~li~~~~~~~~~l~vANvGDSRa~L~r~g~~~~LT~DH~~~~~~ 450 (514)
++.++|.++|..++..+... ..|||++++++...+++ ++++|+||||+|++|+|+..+||.||++.++.
T Consensus 67 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~---l~~anvGDsr~~l~r~~~~~~lt~dh~~~~~~ 143 (240)
T 2j82_A 67 DPVTLLRQAFLAANHAIVEQQRQNSARADMGTTAVVILLDEKGDR---AWCAHVGDSRIYRWRKDQLQQITSDHTWIAQA 143 (240)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTSCSCTTCCBCEEEEEECTTSSE---EEEEEESSCEEEEEETTEEEECSCCCBHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEEecCCE---EEEEEEccCceEEEeCCEEEEECCCCcHHHHH
Confidence 57889999999999988764 14777777777422433 89999999999999999999999999997542
Q ss_pred HHHHHHHcCCCcccCcccccc-ccccccCCCEEeeecCCCcccccceeeeeeecccccceeeecC
Q 010270 451 ERLRIQETGEPLKDGETRLCG-LNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLAR 514 (514)
Q Consensus 451 E~~RI~~agg~v~~g~~Rv~G-L~vsRslGD~~lK~~dg~v~seP~I~~~~~i~~~~~efLILA~ 514 (514)
.+.|+.....-.+..+ +.+||++|+. ...+|++. .+.+.+.+ +|||||
T Consensus 144 -----~~~g~i~~~~~~~~~~~~~ltralG~~--------~~~~p~~~-~~~l~~gd--~lll~S 192 (240)
T 2j82_A 144 -----VQLGSLTIEQARQHPWRHVLSQCLGRE--------DLSQIDIQ-PIDLEPGD--RLLLCS 192 (240)
T ss_dssp ---------------------CCCBSCCBSCT--------TCCCCEEE-EEECCTTC--EEEEEC
T ss_pred -----HHcCCCCHHHHhcCCCcCeEeecCCCC--------CceeEEEE-EEeeCCCC--EEEEEC
Confidence 2333333221112334 7899999994 35679997 56787764 788886
No 17
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=99.89 E-value=7.8e-23 Score=198.97 Aligned_cols=175 Identities=22% Similarity=0.275 Sum_probs=129.3
Q ss_pred eeeeeeeecchhhhhcCCc-cCCCCceEEEEcCCCCCCCceEEEEecCCCchHHHHHHHHHHHHHHHHHHhhhhhhhhhc
Q 010270 297 IPFGVGVASDPMALRRGAK-KLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLL 375 (514)
Q Consensus 297 ~~~~vG~as~~~~~~r~G~-R~~nED~~~v~~~~~~~~~~~lfgVfDGHGG~~aa~~as~~l~~~L~~~l~~~~~~e~~~ 375 (514)
..+.++.+++ .|+ |+.|||++++ +..+|+|||||||+.+|+++|+.+.+.+.+.+...
T Consensus 3 ~~~~~~~~s~------~G~~r~~nED~~~~--------~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~------- 61 (237)
T 1txo_A 3 LVLRYAARSD------RGLVRANNEDSVYA--------GARLLALADGMGGHAAGEVASQLVIAALAHLDDDE------- 61 (237)
T ss_dssp CEEEEEEEEE------CCSSCSSCCEEEEE--------CSSEEEEEEEECTTTHHHHHHHHHHHHHGGGGSSC-------
T ss_pred eEEEEEEecC------CCCCCCcCCCcccc--------CCCEEEEEeCCCCcHHHHHHHHHHHHHHHHHhhhC-------
Confidence 3567788887 475 9999999976 23599999999999999999999999887644311
Q ss_pred ccccHHHHHHHHHHHHHHHhhhc--------cCCCceEEEEEEecCCCceEEEEEEeccceEEEEeCCeEEEcCCCCCCC
Q 010270 376 SQCDASDVLRDAFFQTEASMNHH--------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIA 447 (514)
Q Consensus 376 ~~~~i~~~L~~af~~~d~~i~~~--------~~G~TAtv~li~~~~~~~~~l~vANvGDSRa~L~r~g~~~~LT~DH~~~ 447 (514)
...++.++|.++|..++..+.+. ..|||++++++. +++ ++++|+||||+|++|+|+..+||.||++.
T Consensus 62 ~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~gtT~~~~~i~--~~~---l~~a~vGDsr~~l~r~g~~~~lt~dh~~~ 136 (237)
T 1txo_A 62 PGGDLLAKLDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAILFA--GNR---LGLVHIGDSRGYLLRDGELTQITKDDTFV 136 (237)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHHCGGGTTCEECEEEEEEE--TTE---EEEEEESSCEEEEEETTEEEECSCCCBHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcceEEEEEEE--CCE---EEEEEEccCcEEEEeCCEeEEeCCCCCHH
Confidence 12467889999999999888653 357777777764 333 89999999999999999999999999986
Q ss_pred CHHHHHHHHHcCCCccc-CccccccccccccCCCEEeeecCCCcccccceeeeeeecccccceeeecC
Q 010270 448 SYSERLRIQETGEPLKD-GETRLCGLNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLAR 514 (514)
Q Consensus 448 ~~~E~~RI~~agg~v~~-g~~Rv~GL~vsRslGD~~lK~~dg~v~seP~I~~~~~i~~~~~efLILA~ 514 (514)
++ +...|..... ...+..+..++|++|+. ..+|++. .+.+.+.+ ++||||
T Consensus 137 ~~-----~~~~G~i~~~~~~~~~~~~~~tr~lg~~---------~~~p~~~-~~~l~~~d--~lvl~S 187 (237)
T 1txo_A 137 QT-----LVDEGRITPEEAHSHPQRSLIMRALTGH---------EVEPTLT-MREARAGD--RYLLCS 187 (237)
T ss_dssp HH-----HHHTTSSCTTGGGGCTTTTCBCCCBSSS---------CCCCEEE-EEECCTTC--EEEEEC
T ss_pred HH-----HHHcCCCCHHHHhhCccccceeeccCCC---------CccceEE-EEecCCCC--EEEEEC
Confidence 43 3444432221 11122335688988862 4678987 46787764 568876
No 18
>4h87_A Kanadaptin; FHA domain of PF00498, mRNA processing, nucleus, structural joint center for structural genomics, JCSG, protein structu initiative; HET: SO4; 1.55A {Homo sapiens}
Probab=99.88 E-value=2.3e-22 Score=179.94 Aligned_cols=110 Identities=25% Similarity=0.323 Sum_probs=92.6
Q ss_pred CCcccccCCCceEEEEEEeCCCCCeEEEcccCCCCCCcEEEcCCCCCCeEeCCcccccceeEEEEe---------CCcce
Q 010270 166 FLPKAIADQRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWN---------PNKLK 236 (514)
Q Consensus 166 ~~p~~~~~~~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~---------~~~~~ 236 (514)
..|.++..+...|+|+|++|......+.|.... .++|||.++|||+|+++.|||+||.|.++ ..++.
T Consensus 9 ~~P~wa~~p~~~~~L~v~k~g~~~~~~~L~~~~----~~~IGR~~~~di~l~~~~VSr~HA~I~~r~~~~~~~~~~~~~~ 84 (130)
T 4h87_A 9 QEPPWGGPATAPYSLETLKGGTILGTRSLKGTS----YCLFGRLSGCDVCLEHPSVSRYHAVLQHRASGPDGECDSNGPG 84 (130)
T ss_dssp CCCTTBCCCCSCCEEEEEETTEEEEEEECTTCS----EEEEESSTTSSEECCCTTSCSSCEEEEEBCCCCCC------CC
T ss_pred CCCCCccCCCCCEEEEEEECCeeeeeEEeCCCc----eEEEcCCcCCCEEeCCCCcchhcEEEEEecccCccceeccCCc
Confidence 346666667778999999998878889987652 58999999999999999999999999763 12346
Q ss_pred EEEEeCCCCCceeeCCeecCCCCCCCCCCCCcEEccCCCeeeeccceeEEE
Q 010270 237 WELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHV 287 (514)
Q Consensus 237 ~~l~Dl~StNGT~vNg~~i~~p~~~~~~~g~~~~L~~GD~I~lG~~~~~~~ 287 (514)
|+|+||+|+|||||||++|.+ +.++.|++||+|+||.++..|+
T Consensus 85 ~~l~Dl~StNGT~vNg~ri~~--------~~~~~L~~GD~I~~G~str~yv 127 (130)
T 4h87_A 85 FYLYDLGSTHGTFLNKTRIPP--------RTYCRVHVGHVVRFGGSTRLFI 127 (130)
T ss_dssp EEEEECSCSSCEEETTEECCT--------TCCEECCTTCEEEETTCSEEEE
T ss_pred ceEeeCCCCCceEECCEECCC--------CceeECCCCCEEEECCceEEEE
Confidence 999999999999999999985 5679999999999999877664
No 19
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=99.87 E-value=5.8e-22 Score=192.43 Aligned_cols=173 Identities=23% Similarity=0.257 Sum_probs=123.8
Q ss_pred eeeeeeecchhhhhcCCc-cCCCCceEEEEcCCCCCCCceEEEEecCCCchHHHHHHHHHHHHHHHHHHhhhhhhhhhcc
Q 010270 298 PFGVGVASDPMALRRGAK-KLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLS 376 (514)
Q Consensus 298 ~~~vG~as~~~~~~r~G~-R~~nED~~~v~~~~~~~~~~~lfgVfDGHGG~~aa~~as~~l~~~L~~~l~~~~~~e~~~~ 376 (514)
.+.++.+++ .|+ |+.|||++++ +..+|+|||||||+ ++.||+.+.+.+.+.+...
T Consensus 5 ~~~~~~~s~------~G~~r~~neD~~~~--------~~~~~~V~DG~Gg~--G~~as~~~~~~l~~~~~~~-------- 60 (234)
T 2jfr_A 5 VLSAATATD------QGPVRENNQDACLA--------DGILYAVADGFGAR--GHHASATALKTLSAGFAAA-------- 60 (234)
T ss_dssp EEEEEEEEE------CCSSCSSCCEEEEE--------ETTEEEEEEEESTT--HHHHHHHHHHHHHHHHHHS--------
T ss_pred eEEEEEecC------CCCCCCcCCCccee--------CCcEEEEEeCCCcc--HHHHHHHHHHHHHHHHhcC--------
Confidence 467788887 477 9999999965 34699999999988 5666666666665544322
Q ss_pred cccHHHHHHHHHHHHHHHhhhc------cCCCceEEEEEEecCCCceEEEEEEeccceEEEEeCCeEEEcCCCCCCCCHH
Q 010270 377 QCDASDVLRDAFFQTEASMNHH------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYS 450 (514)
Q Consensus 377 ~~~i~~~L~~af~~~d~~i~~~------~~G~TAtv~li~~~~~~~~~l~vANvGDSRa~L~r~g~~~~LT~DH~~~~~~ 450 (514)
.+ ...|.++|..+++.+.+. ..|||++++++..+.+. .++++|+||||+|++|+|+..+||.||++.++
T Consensus 61 -~~-~~~l~~~~~~~~~~l~~~~~~~~~~~gtT~~~~~i~~~~~~--~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~~- 135 (234)
T 2jfr_A 61 -PD-RDGLLEAVQQANLRVFELLGDEPTVSGTTLTAVAVFEPGQG--GPLVVNIGDSPLYRIRDGHMEQLTDDHSVAGE- 135 (234)
T ss_dssp -CS-HHHHHHHHHHHHHHHHHHHTTSSSCCEECEEEEECCCGGGT--SCEEEEESSCCEEEEETTEEEECSCCCBHHHH-
T ss_pred -Cc-HHHHHHHHHHHHHHHHHhhccCCCCCCccEEEEEEECCCcc--EEEEEEEccCceEEEECCEEEEeCCCCCHHHH-
Confidence 12 678889999999888764 16888888877533211 17899999999999999999999999998653
Q ss_pred HHHHHHHcCCCcccCcccccc-ccccccCCCEEeeecCCCcccccceeeeeeecccccceeeecC
Q 010270 451 ERLRIQETGEPLKDGETRLCG-LNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLAR 514 (514)
Q Consensus 451 E~~RI~~agg~v~~g~~Rv~G-L~vsRslGD~~lK~~dg~v~seP~I~~~~~i~~~~~efLILA~ 514 (514)
+.+.|...........+ +.+||++|+. ...+|++. .+.+.+.+ +|||||
T Consensus 136 ----~~~~g~i~~~~~~~~~~~~~~tralG~~--------~~~~~~~~-~~~l~~gd--~lll~S 185 (234)
T 2jfr_A 136 ----LVRMGEITRHEARWHPQRHLLTRALGIG--------PHIGPDVF-GIDCGPGD--RLLISS 185 (234)
T ss_dssp ----HHHTTSSCHHHHTTCTTTTCBSCCBSSS--------SCCCCEEE-ECCCCTTC--EEEEEC
T ss_pred ----HHHcCCCCHHHHhcCcccceeeecCcCC--------CCceeEEE-EEecCCCC--EEEEEC
Confidence 34445433221111223 7899999984 35678887 46777754 788886
No 20
>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis}
Probab=99.84 E-value=1.4e-20 Score=162.42 Aligned_cols=100 Identities=27% Similarity=0.419 Sum_probs=88.2
Q ss_pred CceEEEEEEeCCCCCeEEEcccCCCCCCcEEEcCCC-CCCeEeCCcccccceeEEEEeCCcceEEEEeCCCCCceeeCCe
Q 010270 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVS-PSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQ 253 (514)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~-~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~Dl~StNGT~vNg~ 253 (514)
+..|.|.++.|+..|+.+.+..+. .++|||.+ +|||+|+++.|||+||+|.++.+ +.|+|+|++|+|||||||+
T Consensus 2 ~~~~~L~v~~G~~~g~~~~l~~~~----~~~iGR~~~~~di~l~d~~vSr~Ha~i~~~~~-~~~~l~Dl~S~nGt~vng~ 76 (106)
T 3gqs_A 2 PSRFLLKVLAGANIGAEFHLDSGK----TYIVGSDPQVADIVLSDMSISRQHAKIIIGND-NSVLIEDLGSKNGVIVEGR 76 (106)
T ss_dssp -CEEEEEECC-CCTTCEEEECTTC----EEEEESCTTTCSEECCCTTSCSSCEEEEECTT-SCEEEEECSCSSCCEETTE
T ss_pred CceEEEEEEeCCCCcEEEEECCCC----EEEEeECCCcCCEEeCCCCcchhhcEEEECCC-CcEEEEECcCCCCeEECCE
Confidence 457899999999999999998863 58999999 79999999999999999999853 3699999999999999999
Q ss_pred ecCCCCCCCCCCCCcEEccCCCeeeeccceeEEEee
Q 010270 254 PINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQI 289 (514)
Q Consensus 254 ~i~~p~~~~~~~g~~~~L~~GD~I~lG~~~~~~~~~ 289 (514)
++.+ ++.|++||+|+||.+.+.|...
T Consensus 77 ~i~~----------~~~L~~Gd~i~~G~~~~~~~~~ 102 (106)
T 3gqs_A 77 KIEH----------QSTLSANQVVALGTTLFLLVDY 102 (106)
T ss_dssp ECSS----------EEECCTTCCEEETTEEEEEEEE
T ss_pred ECCC----------CeECCCCCEEEECCEEEEEEcc
Confidence 9973 4799999999999999888753
No 21
>1uht_A Expressed protein; FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.84 E-value=1.2e-20 Score=165.75 Aligned_cols=107 Identities=33% Similarity=0.553 Sum_probs=95.0
Q ss_pred cCCCceEEEEEEeCCCCCeEEEcccCCCCCCcEEEcCC-CCCCeEeCCcccccceeEEEEeCCcceEEEEeCCCCCceee
Q 010270 172 ADQRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRV-SPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLL 250 (514)
Q Consensus 172 ~~~~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~-~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~Dl~StNGT~v 250 (514)
+..++.+.|.++.|+..|+.+.+..+. .++|||. +.|||+|+++.|||+||+|.++++ .|+|+|++|+|||||
T Consensus 7 ~~~~p~l~L~v~~g~~~g~~~~l~~~~----~~~iGR~~~~~di~l~d~~vSr~Ha~i~~~~~--~~~l~Dl~S~nGT~v 80 (118)
T 1uht_A 7 GMVTPSLRLVFVKGPREGDALDYKPGS----TIRVGRIVRGNEIAIKDAGISTKHLRIESDSG--NWVIQDLGSSNGTLL 80 (118)
T ss_dssp CCCSCEEEEEESSSTTTTCBCCBCTTC----CEEEESSSTTCSEECCSSSSCTTCEEEEECSS--SEEEECCCCSSCCEE
T ss_pred CCCCCeEEEEEEeCCCCCcEEEECCCC----EEEEcCCCCCCCEEeCCCCCchHHeEEEEECC--EEEEEECCCCCCeEE
Confidence 344668999999999999999998742 6899999 799999999999999999999875 699999999999999
Q ss_pred CCeecCCCCCCCCCCCCcEEccCCCeeeeccceeEEEeeecc
Q 010270 251 NSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITSE 292 (514)
Q Consensus 251 Ng~~i~~p~~~~~~~g~~~~L~~GD~I~lG~~~~~~~~~~~~ 292 (514)
||+++.+ ++++.|++||+|.||.+.+.++.+...
T Consensus 81 ng~~l~~--------~~~~~L~~gd~i~lG~~~~~~~~~~~~ 114 (118)
T 1uht_A 81 NSNALDP--------ETSVNLGDGDVIKLGEYTSILVNFVSG 114 (118)
T ss_dssp SSSBCCT--------TCEEECCTTEEEEETTTEEEEEEEECS
T ss_pred CCEECCC--------CCeEEcCCCCEEEECCeEEEEEEEecC
Confidence 9999985 567999999999999999888877643
No 22
>3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B
Probab=99.83 E-value=1.7e-20 Score=168.24 Aligned_cols=113 Identities=21% Similarity=0.240 Sum_probs=92.0
Q ss_pred CCCCcccccCCCceEEEEEEeCCC-CCeEEEcccCCCCCCcEEEcCCCCCCeEeCCcccccceeEEEEeCCcceEEEEeC
Q 010270 164 PEFLPKAIADQRSCLSLEVVSGPS-RGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDM 242 (514)
Q Consensus 164 ~~~~p~~~~~~~~~~~L~v~~G~~-~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~Dl 242 (514)
+.+.|...+.+ +...|.++.|+. .|+.+.|..+ .++|||.++|||+|+++.|||+||+|.++..++.|+|+|+
T Consensus 12 ~~~~~~~~~~~-p~g~L~v~~g~~~~g~~~~L~~~-----~~~IGR~~~~di~l~d~~VSr~HA~i~~~~~~~~~~l~Dl 85 (132)
T 3va4_A 12 SGLVPRGSHME-PIGQLRLFSGTHGPERDFPLYLG-----KNVVGRSPDCSVALPFPSISKQHAVIEISAWNKAPILQDC 85 (132)
T ss_dssp --------CCC-CSEEEEECCBTTBSCEEEEECSE-----EEEEESSTTSSEECCCTTSCTTCEEEEECSTTSCCEEEEC
T ss_pred ccccCccccCC-CcEEEEEEeCCCCCceEEEECCC-----CEEEccCCCCCEEeCCCCcChhHEEEEEEcCCCEEEEEEC
Confidence 45566555443 457899999998 9999999987 7899999999999999999999999999853347999999
Q ss_pred CCCCceeeCCeec--CCCCCCCCCCCCcEEccCCCeeeeccceeEEEeee
Q 010270 243 GSLNGTLLNSQPI--NHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQIT 290 (514)
Q Consensus 243 ~StNGT~vNg~~i--~~p~~~~~~~g~~~~L~~GD~I~lG~~~~~~~~~~ 290 (514)
+|+|||||||+++ .+ +.++.|++||+|.||.+.+.|....
T Consensus 86 ~S~NGT~vNg~~i~l~~--------~~~~~L~~GD~I~lG~~~l~f~~~~ 127 (132)
T 3va4_A 86 GSLNGTQIVKPPRVLPP--------GVSHRLRDQELILFADFPCQYHRLD 127 (132)
T ss_dssp SCSSCEEETTTTEEECT--------TCCEECCTTCEEEETTEEEEEEECC
T ss_pred CCCCCeEECCEEcccCC--------CCEEECCCCCEEEECCEEEEEEECC
Confidence 9999999999984 43 4679999999999999999987654
No 23
>2xt9_B Putative signal transduction protein GARA; lyase-signaling protein complex, KDH, KGD; HET: TPP; 2.20A {Mycobacterium smegmatis}
Probab=99.83 E-value=4.5e-20 Score=161.54 Aligned_cols=100 Identities=30% Similarity=0.500 Sum_probs=89.3
Q ss_pred CCceEEEEEEeCCCCCeEEEcccCCCCCCcEEEcCCCCCCeEeCCcccccceeEEEEeCCcceEEEEeCCCCCceeeCCe
Q 010270 174 QRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQ 253 (514)
Q Consensus 174 ~~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~Dl~StNGT~vNg~ 253 (514)
++..+.|.++.|+..|..+.+... .++|||.++|||+|+++.||++||+|.++++ .|+|+|++|+|||||||+
T Consensus 8 p~~~~~L~v~~g~~~g~~~~l~~~-----~~~IGR~~~~di~l~d~~vSr~Ha~i~~~~~--~~~l~Dl~S~nGt~vng~ 80 (115)
T 2xt9_B 8 PSGSALLVVKRGPNAGSRFLLDQP-----TTSAGRHPDSDIFLDDVTVSRRHAEFRLEGG--EFQVVDVGSLNGTYVNRE 80 (115)
T ss_dssp CCSCEEEEEEESTTTTCEEEECSS-----EEEEESSTTSSEECCSTTSCSSCEEEEEETT--EEEEEECSCSSCEEETTE
T ss_pred CCCcEEEEEEeCCCCCeEEEECCC-----CEEECCCCCCCEEeCCcccChhheEEEEECC--EEEEEECCCCCCeEECCE
Confidence 355789999999999999999886 7899999999999999999999999999865 799999999999999999
Q ss_pred ecCCCCCCCCCCCCcEEccCCCeeeeccceeEEEeeec
Q 010270 254 PINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITS 291 (514)
Q Consensus 254 ~i~~p~~~~~~~g~~~~L~~GD~I~lG~~~~~~~~~~~ 291 (514)
++.+ +.|++||+|.||.+.+.|.....
T Consensus 81 ~i~~-----------~~L~~gd~i~iG~~~l~~~~~~~ 107 (115)
T 2xt9_B 81 PVDS-----------AVLANGDEVQIGKFRLVFLTGPK 107 (115)
T ss_dssp ECSE-----------EEECTTCEEEETTEEEEEEC---
T ss_pred Ecce-----------EECCCCCEEEECCEEEEEEeCCC
Confidence 9974 89999999999999888765443
No 24
>2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A
Probab=99.82 E-value=9.3e-20 Score=165.63 Aligned_cols=97 Identities=35% Similarity=0.534 Sum_probs=89.2
Q ss_pred CCceEEEEEEeCCCCCeEEEcccCCCCCCcEEEcCCCCCCeEeCCcccccceeEEEEeCCcceEEEEeCCCCCceeeCCe
Q 010270 174 QRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQ 253 (514)
Q Consensus 174 ~~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~Dl~StNGT~vNg~ 253 (514)
++..+.|.++.|+..|..+.|... .++|||.++|||+|+|+.|||+||+|.++++ .|+|+|++|+|||||||+
T Consensus 43 p~~~~~L~v~~G~~~g~~~~L~~~-----~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~--~~~l~DlgS~NGT~VNg~ 115 (143)
T 2kb3_A 43 PAGSALLVVKRGPNAGARFLLDQP-----TTTAGRHPESDIFLDDVTVSRRHAEFRINEG--EFEVVDVGSLNGTYVNRE 115 (143)
T ss_dssp SSSCEEEEEEESTTTTCEEEECSS-----EEEESSCTTCSBCCCCSSCCSSSEEEEEETT--EEEEEESCCSSCCEETTE
T ss_pred CCccEEEEEEeCCCCCeEEEeCCC-----CeeccCCCCCCEEeCCCCcChhhEEEEEECC--EEEEEECCCcCCeEECCE
Confidence 455789999999999999999876 7899999999999999999999999999865 799999999999999999
Q ss_pred ecCCCCCCCCCCCCcEEccCCCeeeeccceeEEEe
Q 010270 254 PINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQ 288 (514)
Q Consensus 254 ~i~~p~~~~~~~g~~~~L~~GD~I~lG~~~~~~~~ 288 (514)
++.. +.|++||+|+||.+.+.|..
T Consensus 116 ~i~~-----------~~L~~GD~I~iG~~~l~f~~ 139 (143)
T 2kb3_A 116 PRNA-----------QVMQTGDEIQIGKFRLVFLA 139 (143)
T ss_dssp ECSE-----------EECCTTEEEEETTEEEEEEE
T ss_pred Ecce-----------EECCCCCEEEECCEEEEEEe
Confidence 9974 89999999999999887754
No 25
>2jpe_A Nuclear inhibitor of protein phosphatase 1; FHA domain, NIPP1, mRNA splicing, transcription; NMR {Mus musculus}
Probab=99.81 E-value=1.3e-20 Score=170.69 Aligned_cols=111 Identities=19% Similarity=0.260 Sum_probs=95.1
Q ss_pred CCCcccccCCCceEEEEEEeCCCCCeEEEcccCCCCCCcEEEcCCCC-CCeEeCCcccccceeEEEEeCCcceEEEEeCC
Q 010270 165 EFLPKAIADQRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSP-SDVLLKDSEVSGKHALINWNPNKLKWELVDMG 243 (514)
Q Consensus 165 ~~~p~~~~~~~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~-~di~l~d~~VSr~Ha~I~~~~~~~~~~l~Dl~ 243 (514)
...|.++..+...+.|.++.|+..+..+.|.... .++|||.++ |||+|+++.|||+||+|.+++..+.|+|+|++
T Consensus 22 ~~~P~~a~~p~~~~~L~v~~g~~~g~~~~l~~~~----~~~IGR~~~~~di~l~d~~VSr~Ha~i~~~~~~~~~~l~Dl~ 97 (140)
T 2jpe_A 22 FDCPTWAGKPPPGLHLDVVKGDKLIEKLIIDEKK----YYLFGRNPDLCDFTIDHQSCSRVHAALVYHKHLKRVFLIDLN 97 (140)
T ss_dssp CCCCSSBCCCCSSCBEEEESSSSEEEEECCSSCS----BCCBSSCTTTSSSCCCCSSSCTTSBEEEEBSSSCCEEEECCS
T ss_pred cCCCCcccCCCcCEEEEEEcCCCcceEEEeCCCC----eEEecCCCccCCEEeCCCCcChhheEEEEECCCCcEEEEECC
Confidence 3445555555667899999999999999998752 489999998 99999999999999999999733479999999
Q ss_pred CCCceeeCCeecCCCCCCCCCCCCcEEccCCCeeeeccceeEEE
Q 010270 244 SLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHV 287 (514)
Q Consensus 244 StNGT~vNg~~i~~p~~~~~~~g~~~~L~~GD~I~lG~~~~~~~ 287 (514)
|+|||||||+++.+ ++++.|++||+|.||.+.+.|.
T Consensus 98 S~NGT~vNg~~l~~--------~~~~~L~~gd~i~~G~~~~~f~ 133 (140)
T 2jpe_A 98 STHGTFLGHIRLEP--------HKPQQIPIDSTVSFGASTRAYT 133 (140)
T ss_dssp CSSCEESSSCEECS--------SSCCEECTTCCBBCSSCCCCBC
T ss_pred CCCCeEECCEECCC--------CccEECCCCCEEEECCceEEEE
Confidence 99999999999984 5678999999999999987654
No 26
>3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} SCOP: b.26.1.0 PDB: 3poa_A* 2lc1_A
Probab=99.80 E-value=1.4e-19 Score=154.50 Aligned_cols=94 Identities=29% Similarity=0.484 Sum_probs=84.0
Q ss_pred CceEEEEEEeCCCCCeEEEcccCCCCCCcEEEcCCCCCCeEeCCcccccceeEEEEeCCcceEEEEeCCCCCceeeCCee
Q 010270 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (514)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~Dl~StNGT~vNg~~ 254 (514)
++.+.|.+..|+ |+.+.+..+ .++|||.++|||+++++.||++||+|.++++ .|+|+|++|+|||||||++
T Consensus 3 ~~~~~l~~~~g~--g~~~~l~~~-----~~~IGR~~~~di~l~d~~vSr~Ha~i~~~~~--~~~l~Dl~S~nGt~vng~~ 73 (100)
T 3po8_A 3 GTSVTLQLDDGS--GRTYQLREG-----SNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQ--VALLADLNSTNGTTVNNAP 73 (100)
T ss_dssp CEEEEEEECSSS--CCEEECCSE-----EEEEESSTTCSEECCCTTSCSSCEEEEECSS--CEEEEECSCSSCCEETTEE
T ss_pred CcEEEEEEECCC--CcEEEECCC-----CEEEeCCCCCCEECCCCCcChhhCEEEEeCC--EEEEEECCCCCCEEECCEE
Confidence 445778777775 899999887 7899999999999999999999999999865 6999999999999999999
Q ss_pred cCCCCCCCCCCCCcEEccCCCeeeeccceeEEEe
Q 010270 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQ 288 (514)
Q Consensus 255 i~~p~~~~~~~g~~~~L~~GD~I~lG~~~~~~~~ 288 (514)
+.+ +.|++||+|.||.+.+.|..
T Consensus 74 i~~-----------~~L~~gd~i~iG~~~~~~~~ 96 (100)
T 3po8_A 74 VQE-----------WQLADGDVIRLGHSEIIVRM 96 (100)
T ss_dssp CSE-----------EECCTTCEEEETTEEEEEEE
T ss_pred Cce-----------EECCCCCEEEECCEEEEEEE
Confidence 974 89999999999999887653
No 27
>1r21_A Antigen KI-67; beta sandwich, cell cycle; NMR {Homo sapiens} SCOP: b.26.1.2 PDB: 2aff_A*
Probab=99.80 E-value=1.4e-19 Score=161.28 Aligned_cols=105 Identities=21% Similarity=0.198 Sum_probs=89.1
Q ss_pred cccCCCceEEEEEEe-CCCCCeEEEcccCCCCCCcEEEcCCCCCCeEeCCcccccceeEEEEeCCcceEEEEeCCCCCce
Q 010270 170 AIADQRSCLSLEVVS-GPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGT 248 (514)
Q Consensus 170 ~~~~~~~~~~L~v~~-G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~Dl~StNGT 248 (514)
..+..+++..|.++. ++..|..+.|... .++|||.++|||+|+++.||++||+|.++++ .|+|+|++|+|||
T Consensus 5 ~~g~~~~~~~L~v~~~~~~~g~~~~l~~~-----~~~IGR~~~~di~l~d~~VSr~Ha~i~~~~~--~~~l~Dl~S~nGt 77 (128)
T 1r21_A 5 FPGGMWPTRRLVTIKRSGVDGPHFPLSLS-----TCLFGRGIECDIRIQLPVVSKQHCKIEIHEQ--EAILHNFSSTNPT 77 (128)
T ss_dssp ----CCCCEEEEEEEETTEEEEEEECCSS-----EEEEESSTTSSEECCCTTSCTTCEEEEECSS--CEEECCCCSSSCC
T ss_pred cCCCCCCceEEEEEeCCCCCceEEEECCC-----CEEECCCCCCCEEECCCCCChhHEEEEEECC--EEEEEECCCCCCE
Confidence 334445678999987 5778999999876 7999999999999999999999999999865 6999999999999
Q ss_pred eeCCeecCCCCCCCCCCCCcEEccCCCeeeeccceeEEEeeec
Q 010270 249 LLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITS 291 (514)
Q Consensus 249 ~vNg~~i~~p~~~~~~~g~~~~L~~GD~I~lG~~~~~~~~~~~ 291 (514)
||||+++.. ++.|++||+|.||.+.+.|.....
T Consensus 78 ~vNg~~i~~----------~~~L~~Gd~i~iG~~~~~~~~~~~ 110 (128)
T 1r21_A 78 QVNGSVIDE----------PVRLKHGDVITIIDRSFRYENESL 110 (128)
T ss_dssp EETTEECSS----------CEECCTTEEEECSSCEEEEEEC--
T ss_pred EECCEECCC----------cEEcCCCCEEEECCEEEEEEeCCc
Confidence 999999973 489999999999999988876543
No 28
>2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A
Probab=99.80 E-value=2.5e-19 Score=165.90 Aligned_cols=99 Identities=32% Similarity=0.498 Sum_probs=89.8
Q ss_pred CCCceEEEEEEeCCCCCeEEEcccCCCCCCcEEEcCCCCCCeEeCCcccccceeEEEEeCCcceEEEEeCCCCCceeeCC
Q 010270 173 DQRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNS 252 (514)
Q Consensus 173 ~~~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~Dl~StNGT~vNg 252 (514)
.++..+.|.++.|+..|..|.|... .++|||.++|||+|+++.|||+||+|.++++ .|+|+|++|+|||||||
T Consensus 51 ~p~~~~~L~v~~G~~~g~~~~L~~~-----~~~IGR~~~~di~l~d~~VSr~HA~I~~~~~--~~~l~DlgS~NGT~VNg 123 (162)
T 2kfu_A 51 LPPGSALLVVKRGPNAGSRFLLDQA-----ITSAGRHPDSDIFLDDVTVSRRHAEFRLENN--EFNVVDVGSLNGTYVNR 123 (162)
T ss_dssp CCSSCCEEEEEESTTCSCEEETTSS-----EEEEESCSSSSEESTTTSSSSCSEEEEEETT--EEEEECCCCSSCEEETT
T ss_pred CCCccEEEEEEeCCCCCeEEEECCC-----CEEECCCCCCCEEECCCCcChhhEEEEEECC--EEEEEECCCCCCeEECC
Confidence 3455688999999999999999876 7899999999999999999999999999865 79999999999999999
Q ss_pred eecCCCCCCCCCCCCcEEccCCCeeeeccceeEEEee
Q 010270 253 QPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQI 289 (514)
Q Consensus 253 ~~i~~p~~~~~~~g~~~~L~~GD~I~lG~~~~~~~~~ 289 (514)
+++.+ +.|++||+|.||.+.+.|...
T Consensus 124 ~~i~~-----------~~L~~GD~I~iG~~~l~f~~~ 149 (162)
T 2kfu_A 124 EPVDS-----------AVLANGDEVQIGKFRLVFLTG 149 (162)
T ss_dssp BCCSE-----------EECCSSCEEEETTEEEEEECS
T ss_pred EEcce-----------EECCCCCEEEECCEEEEEEeC
Confidence 99974 899999999999998887653
No 29
>3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP}
Probab=99.79 E-value=4.9e-19 Score=158.57 Aligned_cols=103 Identities=18% Similarity=0.304 Sum_probs=85.8
Q ss_pred CceEEEEEEeCCCCCeEEEcccCCCCCCcEEEcCCCCCCeEeCCcccccceeEEEEeCCc---ceEEEEeC-----CCCC
Q 010270 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNK---LKWELVDM-----GSLN 246 (514)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~---~~~~l~Dl-----~StN 246 (514)
+....+.++.++..++.+.+... .++|||.++|||+|+++.|||+||+|.+.... +.|+|+|+ +|+|
T Consensus 8 p~~~~~lvv~~~~~~~~~~l~~~-----~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~g~~~~~l~Dl~~~~~~S~N 82 (131)
T 3hx1_A 8 PLQEHILIILDDAGRREVLLTET-----FYTIGRSPRADIRIKSQFVSRIHAVLVRKSSDDVQAAYRIIDGDEDGQSSVN 82 (131)
T ss_dssp -CCEEEEEEEETTEEEEEEECSS-----EEEEESSTTSSEECCCSSSCTTCEEEEEC------CCEEEEESCTTSCCCSS
T ss_pred CCcceEEEEECCCCcEEEEECCC-----CEEECCCCCCCEEECCCCcChhheEEEEEccCCCceEEEEEECCCCCCCCCC
Confidence 33455666666666889999886 79999999999999999999999999997321 24999999 8999
Q ss_pred ceeeCCeecCCCCCCCCCCCCcEEccCCCeeeeccceeEEEeeeccc
Q 010270 247 GTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITSET 293 (514)
Q Consensus 247 GT~vNg~~i~~p~~~~~~~g~~~~L~~GD~I~lG~~~~~~~~~~~~n 293 (514)
||||||+++.+ +.|++||+|.||.+.+.|+.+....
T Consensus 83 GT~vNg~~i~~-----------~~L~~GD~I~iG~~~~~~~~~~~~d 118 (131)
T 3hx1_A 83 GLMINGKKVQE-----------HIIQTGDEIVMGPQVSVRYEYRRRD 118 (131)
T ss_dssp CEEETTEEESE-----------EECCTTCEEECSTTCEEEEEEECC-
T ss_pred ceEECCEEeEe-----------EECCCCCEEEECCEEEEEEEEecCC
Confidence 99999999974 8999999999999999988876543
No 30
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=99.76 E-value=3.3e-18 Score=164.43 Aligned_cols=152 Identities=22% Similarity=0.230 Sum_probs=97.1
Q ss_pred CCCceEEEEecCCCchHHHHHHHHHHHHHHHHHHhhhhhhhhhcccccHHHHHHHHHHHHHHHhhhc--------cCCCc
Q 010270 332 VDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHH--------YEGCT 403 (514)
Q Consensus 332 ~~~~~lfgVfDGHGG~~aa~~as~~l~~~L~~~l~~~~~~e~~~~~~~i~~~L~~af~~~d~~i~~~--------~~G~T 403 (514)
.++..+|+|||||||+.++++||+.+.+.|.+.+.... ..+ ++|..++..+... ..|||
T Consensus 7 ~~~~~l~~VaDG~GG~~~g~~AS~~~~~~l~~~~~~~~---------~~~----~~~~~an~~l~~~~~~~~~~~~~GtT 73 (211)
T 3rnr_A 7 GGDKAYCVVVDGMGGMIRGDEAAQRALSASVGVLDAGG---------SPL----DAVLAAQAAVHRWASQGGILGRTGAT 73 (211)
T ss_dssp ETTEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHTTC---------CHH----HHHHHHHHHHHHHHHHTTCTTSCCEE
T ss_pred CCCccEEEEEeCCcCcHHHHHHHHHHHHHHHHHHhccC---------CHH----HHHHHHHHHHHHHHhhccCCCCcchh
Confidence 36778999999999999999999999999988765432 123 4445555544432 35677
Q ss_pred eEEEEEEecCCCceEEEEEEeccceEEEEeCCeEEEcCCCCCCCCHHHHHHHHHc-CCCcccCccccccc----------
Q 010270 404 ATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQET-GEPLKDGETRLCGL---------- 472 (514)
Q Consensus 404 Atv~li~~~~~~~~~l~vANvGDSRa~L~r~g~~~~LT~DH~~~~~~E~~RI~~a-gg~v~~g~~Rv~GL---------- 472 (514)
++++++...+++ +|++|+||||+|++|+|++.+||.||++.++.++..+ .. .++..+..+|..|.
T Consensus 74 ~~~~~i~~~~~~---~~~anvGDSr~yl~r~g~~~~lt~dh~~~~~~~~~g~-~~~~~~~~~~ltralG~~~~~~~~~~~ 149 (211)
T 3rnr_A 74 MAVAAVNLRDGT---LEWASVGDCRVYLFKGGRLSRLSLDHNVSSEMVLLGR-GPVPGPAGEMITSFIGIENLTEISTSE 149 (211)
T ss_dssp EEEEEEETTTTE---EEEEEESSCEEEEEETTEEEECCCCCBHHHHHHHTTS-CCCCSHHHHCBSCCBTCSSCCCCEECS
T ss_pred heeeeeeeCCCE---EEEEEEccCeEEEEeCCEEEEECCCcHHHHHHHHcCC-ChhhCCCccEEecccCCCCCcceeEec
Confidence 777766532444 8999999999999999999999999998755333221 00 01111222333330
Q ss_pred -cccccCCCEEeeecCC--Ccccccceeeee
Q 010270 473 -NLARMLGDKFLKQQDA--RFSAEPYISPVV 500 (514)
Q Consensus 473 -~vsRslGD~~lK~~dg--~v~seP~I~~~~ 500 (514)
.+...-||.++.|+|| ...++.+|..++
T Consensus 150 ~~~~l~~gd~llL~SDGl~d~~~~~~i~~~l 180 (211)
T 3rnr_A 150 APLPLEAGEGVLVVSDGVYRSLHEDRIAMAL 180 (211)
T ss_dssp SCEECCTTCEEEEEEC-----CCTTEEEEEE
T ss_pred ceecCCCCCEEEEEcCCCCCCcCHHHHHHHH
Confidence 1123447777777777 455556665443
No 31
>3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae}
Probab=99.75 E-value=3.6e-18 Score=157.57 Aligned_cols=96 Identities=26% Similarity=0.342 Sum_probs=82.2
Q ss_pred CceEEEEEEeCCC----CCeEEEcccCCCCCCcEEEcCCC---------------CCCeEeCCcccccceeEEEEeCCcc
Q 010270 175 RSCLSLEVVSGPS----RGIRCSVQSANASRLPLTLGRVS---------------PSDVLLKDSEVSGKHALINWNPNKL 235 (514)
Q Consensus 175 ~~~~~L~v~~G~~----~g~~~~l~~~~~~~~~~~IGR~~---------------~~di~l~d~~VSr~Ha~I~~~~~~~ 235 (514)
+..|.|++..|+. ....+.|.... .++|||.+ .|||+|+++.|||+||+|.+..+++
T Consensus 29 ~~~~~l~v~k~g~~~~~~~~~~~L~~~~----~~~IGR~~~~~~~~~~~~~n~~~~~Di~l~~~~VSr~HA~I~~~~~~~ 104 (158)
T 3els_A 29 RTMYELVIYRKNDKDKGPWKRYDLNGRS----CYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRG 104 (158)
T ss_dssp SCCEEEEEEEGGGGGGCCSEEEECSSCS----EEEEEECCCC---------CCCCCCSEEECCTTSCSSCEEEEEEEETT
T ss_pred CCceEEEEEeCCccCcccceEEEecCCC----ceEeccccccccccccccccccccCCEEcCCCCCCcccEEEEEEccCC
Confidence 5579999998765 56789898763 68999995 4999999999999999999986521
Q ss_pred --eEEEEeCCCCCceeeCCeecCCCCCCCCCCCCcEEccCCCeeeeccc
Q 010270 236 --KWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTT 282 (514)
Q Consensus 236 --~~~l~Dl~StNGT~vNg~~i~~p~~~~~~~g~~~~L~~GD~I~lG~~ 282 (514)
.|+|+|++|+|||||||+++.+ +.++.|++||+|+||..
T Consensus 105 ~~~~~l~Dl~StNGT~VNg~ri~~--------~~~~~L~~GD~I~~G~s 145 (158)
T 3els_A 105 ILKCYVMDLDSSNGTCLNNVVIPG--------ARYIELRSGDVLTLSEF 145 (158)
T ss_dssp EEEEEEEECSCSSCCEETTEECCT--------TCCEECCTTEEEESSSC
T ss_pred eeEEEEEeCCCCCccEECCEEcCC--------CceEEcCCCCEEEECCC
Confidence 3999999999999999999985 46799999999999954
No 32
>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis}
Probab=99.75 E-value=2e-18 Score=158.65 Aligned_cols=90 Identities=30% Similarity=0.515 Sum_probs=80.8
Q ss_pred eEEEEEEeCCCCCeEEEcccCCCCCCcEEEcCCCCCCeEeCCcccccceeEEEEeCCcceEEEEeCCCCCceeeCCeecC
Q 010270 177 CLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPIN 256 (514)
Q Consensus 177 ~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~Dl~StNGT~vNg~~i~ 256 (514)
.+.|.+..|+ ++.+.|... .++|||.++|||+|+|+.|||+||+|.++++ .|+|+|++|+|||||||+++.
T Consensus 67 ~l~L~v~~g~--g~~~~L~~~-----~~~IGR~~~~dI~L~d~~VSr~HA~I~~~~~--~~~l~DlgStNGT~VNG~~i~ 137 (157)
T 3oun_A 67 SVTLQLDDGS--GRTYQLREG-----SNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQ--VALLADLNSTNGTTVNNAPVQ 137 (157)
T ss_dssp CCEEEETTTT--CCEEECCSE-----EEEEESSTTCSEECCCTTSCTTCEEEEECSS--CEEEEECSCSSCCEETTEECS
T ss_pred EEEEEEcCCC--CeEEEECCC-----cEEEEeCCCCCEEeCCCCcChhHEEEEEECC--EEEEEECCCCCCeEECCEECc
Confidence 4566666664 899999887 7899999999999999999999999999875 699999999999999999997
Q ss_pred CCCCCCCCCCCcEEccCCCeeeeccceeEE
Q 010270 257 HPDSGSRHWGKPMELTSGDIITLGTTSSIH 286 (514)
Q Consensus 257 ~p~~~~~~~g~~~~L~~GD~I~lG~~~~~~ 286 (514)
+ +.|++||+|.||.+.++|
T Consensus 138 ~-----------~~L~~GD~I~lG~~~l~f 156 (157)
T 3oun_A 138 E-----------WQLADGDVIRLGHSEIIV 156 (157)
T ss_dssp E-----------EECCTTCEEEETTEEEEE
T ss_pred e-----------EECCCCCEEEECCEEEEE
Confidence 4 899999999999998876
No 33
>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A
Probab=99.73 E-value=3.5e-18 Score=149.55 Aligned_cols=92 Identities=23% Similarity=0.242 Sum_probs=78.9
Q ss_pred eEEEEEEeCCCCCeEEEcccCCCCCCcEEEcCCCCCCeEeCCc-ccccceeEEEEeCCcceEEEEeCCCCCceeeCCeec
Q 010270 177 CLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDS-EVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPI 255 (514)
Q Consensus 177 ~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~-~VSr~Ha~I~~~~~~~~~~l~Dl~StNGT~vNg~~i 255 (514)
..+|..+.+...+..+.+... .++|||.++|||+|++. .|||+||+|.++..++.|+|+| +|+|||||||+++
T Consensus 4 wg~L~~~~~~~~~~~~~l~~~-----~~~iGR~~~~di~l~~~~~vSr~Ha~i~~~~~~~~~~l~D-~S~NGt~vng~~l 77 (116)
T 1lgp_A 4 WGRLLRLGAEEGEPHVLLRKR-----EWTIGRRRGCDLSFPSNKLVSGDHCRIVVDEKSGQVTLED-TSTSGTVINKLKV 77 (116)
T ss_dssp CEEECCTTCCSSSCCEEECSS-----EEEEESSTTSSEECTTCTTSCTTCEEEEECTTTCCEEEEE-CSSSCCCCCCCCC
T ss_pred EEEEEEeCCCCCccEEEECCC-----CEEECCCCCCCEEeCCCCCCChhHeEEEEECCCCeEEEEE-CCcCCcEECCEEc
Confidence 456777766566778888876 79999999999999875 9999999999974334799999 9999999999999
Q ss_pred CCCCCCCCCCCCcEEccCCCeeeeccc
Q 010270 256 NHPDSGSRHWGKPMELTSGDIITLGTT 282 (514)
Q Consensus 256 ~~p~~~~~~~g~~~~L~~GD~I~lG~~ 282 (514)
.+ ++++.|++||+|.||..
T Consensus 78 ~~--------~~~~~L~~GD~i~~G~~ 96 (116)
T 1lgp_A 78 VK--------KQTCPLQTGDVIYLVYR 96 (116)
T ss_dssp CC--------SSCCCCCTTCEEEEECC
T ss_pred CC--------CCcEECCCCCEEEEecc
Confidence 85 56789999999999985
No 34
>1dmz_A Protein (protein kinase SPK1); beta-sandwich, antiparallel beta-sheets, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1fhq_A 1fhr_A* 1j4k_A* 1j4l_A* 1k2m_A* 1k2n_A*
Probab=99.73 E-value=8.8e-18 Score=155.09 Aligned_cols=101 Identities=18% Similarity=0.183 Sum_probs=86.8
Q ss_pred ceEEEEEEeCCCCCeEEEcccCCCCCCcEEEcCCCCCCeEeCCcccccceeEEEEeCC-------------cceEEEEeC
Q 010270 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPN-------------KLKWELVDM 242 (514)
Q Consensus 176 ~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~-------------~~~~~l~Dl 242 (514)
..+.|.+..++..++.+.|..+.. +++|||.++|||+|+++.|||+||+|.++.. .+.|+|+|+
T Consensus 4 ~~l~L~p~~~~~~~~~i~L~~~~~---~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~g~~~~~~~~~~~~~~~l~Dl 80 (158)
T 1dmz_A 4 RFLTLKPLPDSIIQESLEIQQGVN---PFFIGRSEDCNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIWYCHT 80 (158)
T ss_dssp CCEEEEECTTSSCCCCEEETTSCS---CEEEESSTTSSEECCCTTSCSSSEEEEEEECCCCCCCSSCSCSSCEEEEEEEC
T ss_pred eEEEEEeCCCCccceEEEEcCCCc---eEEECCCCCCCEEeCCCCcChHHeEEEEecCccccccccccccccccEEEEEC
Confidence 357788888888888999987622 5999999999999999999999999999751 047999999
Q ss_pred CCCCceeeCCeecCCCCCCCCCCCCcEEccCCCeeee-----ccceeEEEe
Q 010270 243 GSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITL-----GTTSSIHVQ 288 (514)
Q Consensus 243 ~StNGT~vNg~~i~~p~~~~~~~g~~~~L~~GD~I~l-----G~~~~~~~~ 288 (514)
|+|||||||++|.+ +.++.|++||+|.| |.+.+.|..
T Consensus 81 -StNGT~VNg~ri~~--------~~~~~L~~GD~I~l~~d~~G~~~l~f~~ 122 (158)
T 1dmz_A 81 -GTNVSYLNNNRMIQ--------GTKFLLQDGDEIKIIWDKNNKFVIGFKV 122 (158)
T ss_dssp -STTCCEETTEECCS--------SEEEECCSSCCEESCCCTTTTCCCCEEE
T ss_pred -CcCCeEECCEEcCC--------CceEEcCCCCEEEEeecCCCCEEEEEEE
Confidence 99999999999986 57899999999999 998877653
No 35
>3elv_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 2.40A {Saccharomyces cerevisiae} PDB: 2jkd_A
Probab=99.72 E-value=1.9e-17 Score=157.81 Aligned_cols=97 Identities=26% Similarity=0.339 Sum_probs=81.0
Q ss_pred CceEEEEEEeCCC----CCeEEEcccCCCCCCcEEEcCCC---------------CCCeEeCCcccccceeEEEEeCCcc
Q 010270 175 RSCLSLEVVSGPS----RGIRCSVQSANASRLPLTLGRVS---------------PSDVLLKDSEVSGKHALINWNPNKL 235 (514)
Q Consensus 175 ~~~~~L~v~~G~~----~g~~~~l~~~~~~~~~~~IGR~~---------------~~di~l~d~~VSr~Ha~I~~~~~~~ 235 (514)
+..|.|+|+.+.. .-..+.|.... .++|||++ .|||+|+++.|||+||+|.+...++
T Consensus 76 ~~~~~L~v~k~g~k~~~~i~~~~L~~~s----~y~IGR~~~~~~~~~~~~~~e~~~cDIvL~dp~VSR~HA~I~~~~~~~ 151 (205)
T 3elv_A 76 RTMYELVIYRKNDKDKGPWKRYDLNGRS----CYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRG 151 (205)
T ss_dssp SCCEEEEEEEGGGCTTCCSEEEECSSCS----EEEEEECCCC---------CCCCCCSEEECCTTSCTTCEEEEEEEETT
T ss_pred CCceEEEEEeCCCcccccceEEEecCCC----ceeecccccccccccccccccCccceEEeCCCCCCcccEEEEEecCCC
Confidence 4469999997654 45688887653 79999985 3999999999999999999875422
Q ss_pred --eEEEEeCCCCCceeeCCeecCCCCCCCCCCCCcEEccCCCeeeeccce
Q 010270 236 --KWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTS 283 (514)
Q Consensus 236 --~~~l~Dl~StNGT~vNg~~i~~p~~~~~~~g~~~~L~~GD~I~lG~~~ 283 (514)
.|+|+|++|+|||||||++|.+ +.++.|++||+|+||...
T Consensus 152 ~~~~~l~DLgStNGTfVNG~rI~~--------~~~~~L~~GD~I~fG~s~ 193 (205)
T 3elv_A 152 ILKCYVMDLDSSNGTCLNNVVIPG--------ARYIELRSGDVLTLSEFE 193 (205)
T ss_dssp EEEEEEEECSCSSCCEETTEECCB--------TSCEECCTTCEEESSSSG
T ss_pred ceeEEEEeCCCCCCCeECCEECCC--------CceeECCCCCEEEECCCC
Confidence 4999999999999999999985 466899999999999653
No 36
>2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A*
Probab=99.72 E-value=1.8e-17 Score=151.89 Aligned_cols=99 Identities=24% Similarity=0.339 Sum_probs=80.7
Q ss_pred CceEEEEEEeCCCCCeEEEcccCCCCCCcEEEcCCCCCCeEeCCcccccceeEEEEe----C--CcceEEEEeCCCCCce
Q 010270 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWN----P--NKLKWELVDMGSLNGT 248 (514)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~----~--~~~~~~l~Dl~StNGT 248 (514)
+.+..|.++. +..+..+.+.... .++|||.++|||+|+++.|||+||+|.+. + .++.|+|+|+ |+|||
T Consensus 16 ~~~~~L~~~~-~~~g~~~~l~~~~----~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~~~~~~~l~Dl-S~NGT 89 (151)
T 2jqj_A 16 TCLGHLVNLI-PGKEQKVEITNRN----VTTIGRSRSCDVILSEPDISTFHAEFHLLQMDVDNFQRNLINVIDK-SRNGT 89 (151)
T ss_dssp CEEEEEEEEE-TTEEEEEEEECCS----CEEEESSTTSSEECCCTTCCTTSEEEEEEEEEETTEEEEEEEEEEC-CSSCE
T ss_pred CceEEEEEec-CCCceEEEEcCCC----eEEeCCCCCCCEEECCCCCccccCEEEEecccCCcCcCCEEEEEEC-CCCCe
Confidence 4566777764 4468899998521 78999999999999999999999999992 1 1247999999 99999
Q ss_pred eeCCeecCCCCCCCCCCCCcEEccCCCeeeeccc-eeEEEe
Q 010270 249 LLNSQPINHPDSGSRHWGKPMELTSGDIITLGTT-SSIHVQ 288 (514)
Q Consensus 249 ~vNg~~i~~p~~~~~~~g~~~~L~~GD~I~lG~~-~~~~~~ 288 (514)
||||+++.+ + ++.|++||+|.||.+ .+.|..
T Consensus 90 ~VNg~~i~~--------~-~~~L~~GD~I~lG~~~~~~f~~ 121 (151)
T 2jqj_A 90 FINGNRLVK--------K-DYILKNGDRIVFGKSCSFLFKY 121 (151)
T ss_dssp EETTEECCS--------S-CEEECSSEEEEETTTEEEEEEE
T ss_pred EECCEEcCC--------C-ceECCCCCEEEECCCcEEEEEE
Confidence 999999985 3 699999999999994 444443
No 37
>1qu5_A Protein kinase SPK1; FHA, RAD53, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.72 E-value=7e-18 Score=159.12 Aligned_cols=110 Identities=16% Similarity=0.159 Sum_probs=89.2
Q ss_pred CCcccccCCCceEEEEEEeCCCCCeEEEcccCCCCCCcEEEcCCCCCCeEeCCcccccceeEEEEeCC------------
Q 010270 166 FLPKAIADQRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPN------------ 233 (514)
Q Consensus 166 ~~p~~~~~~~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~------------ 233 (514)
..|.........+.|....++..+..+.|..+.. +++|||+++|||+|+++.|||+||+|.+...
T Consensus 18 ~~~~~~~~~g~~l~L~~~~~~~~~~~i~L~~~~~---~~~IGR~~~~di~l~d~~VSr~HA~I~~~~~~~g~~~~e~~~~ 94 (182)
T 1qu5_A 18 VKSSKKKGNGRFLTLKPLPDSIIQESLEIQQGVN---PFFIGRSEDCNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQ 94 (182)
T ss_dssp SSCSCCSSSSCCEEECCCTTSSSCSCCCBTTCCS---SEEESSSTTSSSCCCCTTSCSSCEEEEEECCCCCSSCCSSCCC
T ss_pred ceecccCCCccEEEEEeCCCCCcceEEEEcCCCc---eEEECCCCCCCEEECCCCcChHHeEEEEecCcccccccccccc
Confidence 3333344445567777777777778888887622 5999999999999999999999999999761
Q ss_pred -cceEEEEeCCCCCceeeCCeecCCCCCCCCCCCCcEEccCCCeeee-----ccceeEEE
Q 010270 234 -KLKWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITL-----GTTSSIHV 287 (514)
Q Consensus 234 -~~~~~l~Dl~StNGT~vNg~~i~~p~~~~~~~g~~~~L~~GD~I~l-----G~~~~~~~ 287 (514)
.+.|+|+|+ |+|||||||++|.+ +.++.|++||+|.| |.+.+.|.
T Consensus 95 ~~~~~~l~Dl-StNGT~VNg~ri~~--------~~~~~L~~GD~I~l~~d~~G~~~l~f~ 145 (182)
T 1qu5_A 95 GLDDIWYCHT-GTNVSYLNNNRMIQ--------GTKFLLQDGDEIKIIWDKNNKFVIGFK 145 (182)
T ss_dssp SCCEEEECCC-SSSCCEETTEECCS--------SEEEECCTTBCCEEEEEGGGTEEEECC
T ss_pred ccceEEEEEC-CcCCeEECCEEcCC--------CcceEcCCCCEEEEEEcCCCCEEEEEE
Confidence 037999999 99999999999986 57899999999999 99877664
No 38
>1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A*
Probab=99.71 E-value=2.2e-17 Score=153.32 Aligned_cols=99 Identities=26% Similarity=0.271 Sum_probs=84.0
Q ss_pred CCceEEEEEEeCCCCCeEEEcccC------CCCCCcEEEcCCCCCCeEeCCc-ccccceeEEEEeCCcceEEEEeCCCCC
Q 010270 174 QRSCLSLEVVSGPSRGIRCSVQSA------NASRLPLTLGRVSPSDVLLKDS-EVSGKHALINWNPNKLKWELVDMGSLN 246 (514)
Q Consensus 174 ~~~~~~L~v~~G~~~g~~~~l~~~------~~~~~~~~IGR~~~~di~l~d~-~VSr~Ha~I~~~~~~~~~~l~Dl~StN 246 (514)
.+..+.|.++.|+..|..+.+... ...+..++|||+++|||+|+++ .|||+||+|.++.+ +.|+|+|+ |+|
T Consensus 30 ~~~~~~L~v~~G~~~g~~~~l~~~~v~~~~~~~~~~~~IGR~~~~di~l~d~~~vSr~Ha~I~~~~~-g~~~l~Dl-S~N 107 (164)
T 1g3g_A 30 ENIVCRVICTTGQIPIRDLSADISQVLKEKRSIKKVWTFGRNPACDYHLGNISRLSNKHFQILLGED-GNLLLNDI-STN 107 (164)
T ss_dssp SSCCEEEECSSSSSCCEEECCCHHHHHHCSSSCCEEEEEESSSSSSEECCCCTTTTSSCEEEEECST-TCEEEEEC-CSS
T ss_pred CCccEEEEEecCCCCCeEEEeccccccccccccCCcEEECCCCCCCEEeCCcCCcChhHEEEEECCC-CCEEEEEC-CCC
Confidence 345689999999999999999842 0111258999999999999998 69999999999633 36999999 999
Q ss_pred ceeeCCeecCCCCCCCCCCCCcEEccCCCeeeeccc
Q 010270 247 GTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTT 282 (514)
Q Consensus 247 GT~vNg~~i~~p~~~~~~~g~~~~L~~GD~I~lG~~ 282 (514)
||||||+++.+ +.++.|++||+|.||.+
T Consensus 108 GT~vNg~~i~~--------~~~~~L~~GD~I~iG~~ 135 (164)
T 1g3g_A 108 GTWLNGQKVEK--------NSNQLLSQGDEITVGVG 135 (164)
T ss_dssp CEEETTEEECT--------TEEEECCTTCEEEESCS
T ss_pred CeEECCEEcCC--------CCceEcCCCCEEEECCC
Confidence 99999999985 56799999999999996
No 39
>2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2
Probab=99.71 E-value=1.6e-17 Score=151.28 Aligned_cols=92 Identities=27% Similarity=0.394 Sum_probs=76.9
Q ss_pred CceEEEEEEeCCCCCeEEEcccCCCCCCcEEEcCCCCCCeEeCCcc----cccceeEEEEeCCcceEEEEeCCCCCceee
Q 010270 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSE----VSGKHALINWNPNKLKWELVDMGSLNGTLL 250 (514)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~----VSr~Ha~I~~~~~~~~~~l~Dl~StNGT~v 250 (514)
...|.|. ..|+..+ .+.+.... .++|||.++|||+|+++. |||+||+|.++.+ +.|+|+|++|+|||||
T Consensus 15 ~~~w~L~-~~G~~~~-~~~l~~~~----~~~IGR~~~~di~l~~~~~~~~VSr~Ha~i~~~~~-g~~~l~Dl~S~NGT~v 87 (145)
T 2csw_A 15 GRSWCLR-RVGMSAG-WLLLEDGC----EVTVGRGFGVTYQLVSKICPLMISRNHCVLKQNPE-GQWTIMDNKSLNGVWL 87 (145)
T ss_dssp SEEEEEC-CTTCSCC-BEECCTTC----CEEEESSTTSSEECCCSSCGGGSCTTCEEEEECTT-SCEEEEBSSCSSCEEE
T ss_pred CccEEEE-EeCCCCC-eEEeCCCC----cEEECCCCCCCEEECCCCcCCCCChhHeEEEEcCC-CeEEEEECCCCCCeEE
Confidence 3457777 6676655 45554331 689999999999999998 9999999999643 3699999999999999
Q ss_pred CCeecCCCCCCCCCCCCcEEccCCCeeeecc
Q 010270 251 NSQPINHPDSGSRHWGKPMELTSGDIITLGT 281 (514)
Q Consensus 251 Ng~~i~~p~~~~~~~g~~~~L~~GD~I~lG~ 281 (514)
||+++.+ ++++.|++||+|.||.
T Consensus 88 Ng~~i~~--------~~~~~L~~GD~I~iG~ 110 (145)
T 2csw_A 88 NRARLEP--------LRVYSIHQGDYIQLGV 110 (145)
T ss_dssp SSCBCCB--------TCCEECCSSCCEEESC
T ss_pred CCEECCC--------CccEECCCCCEEEECC
Confidence 9999985 5679999999999998
No 40
>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2
Probab=99.71 E-value=4e-17 Score=149.21 Aligned_cols=93 Identities=19% Similarity=0.157 Sum_probs=77.5
Q ss_pred CceEEEEEEeCCCCCeEEEcccCCCCCCcEEEcCCCCCCeEeCCcc---------cccceeEEEEeCCc---ceEEEEeC
Q 010270 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSE---------VSGKHALINWNPNK---LKWELVDM 242 (514)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~---------VSr~Ha~I~~~~~~---~~~~l~Dl 242 (514)
..+.+|..+.+.. ..+.|... .++|||.+.|||+|+++. |||+||+|.+..++ +.|+|+|+
T Consensus 28 ~~w~~L~~~~~~~--~~i~L~~~-----~~~IGR~~~~di~l~d~~~~~~~~~~~VSr~Ha~I~~~~~~~~~~~~~i~D~ 100 (149)
T 1gxc_A 28 APWARLWALQDGF--ANLECVND-----NYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDH 100 (149)
T ss_dssp -CCEEEEECSTTC--CCEEECSS-----EEEEESSTTCSEECCCGGGGGSSGGGGSCTTCEEEEEEECTTSSEEEEEEEC
T ss_pred CeeEEEEEcCCCC--ceEEECCC-----CEEecCCCCCCEEECCccccccccCCcCchhheEEEEECCCCceeEEEEEEC
Confidence 3456777776543 35788766 789999999999999985 99999999998751 26999997
Q ss_pred CCCCceeeCCeecCCCCCCCCCCCCcEEccCCCeeeeccce
Q 010270 243 GSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTS 283 (514)
Q Consensus 243 ~StNGT~vNg~~i~~p~~~~~~~g~~~~L~~GD~I~lG~~~ 283 (514)
|+|||||||+++.+ +.++.|++||+|.||...
T Consensus 101 -StNGT~VNg~~i~~--------~~~~~L~~GD~I~lG~~~ 132 (149)
T 1gxc_A 101 -SGNGTFVNTELVGK--------GKRRPLNNNSEIALSLSR 132 (149)
T ss_dssp -CSSCEEETTEECCT--------TCEEECCTTEEEEESSTT
T ss_pred -CCCCeEECCEECCC--------CCeEECCCCCEEEECCCC
Confidence 99999999999985 678999999999999953
No 41
>1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2
Probab=99.70 E-value=4.4e-17 Score=143.58 Aligned_cols=95 Identities=17% Similarity=0.090 Sum_probs=80.0
Q ss_pred eEEEEEEeCC-CC----CeEEEcccCCCCCCcEEEcC--CCCCCeEeCCcccccceeEEEEeCCcceEEEEeCCCCCcee
Q 010270 177 CLSLEVVSGP-SR----GIRCSVQSANASRLPLTLGR--VSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTL 249 (514)
Q Consensus 177 ~~~L~v~~G~-~~----g~~~~l~~~~~~~~~~~IGR--~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~Dl~StNGT~ 249 (514)
+.+|..+.+. .. +..+.|..+ .++||| .++|||+|+++.||++||+|.+.++ .|+|+|++|+||||
T Consensus 11 ~p~Lv~l~~d~~~s~~~~~~~~L~~~-----~~~IGr~r~~~~di~l~~~~vSr~Ha~i~~~~~--~~~l~dl~S~ngt~ 83 (120)
T 1wln_A 11 LPYLVELSPDGSDSRDKPKLYRLQLS-----VTEVGTEKFDDNSIQLFGPGIQPHHCDLTNMDG--VVTVTPRSMDAETY 83 (120)
T ss_dssp CCEEEEECSSSCCCSSCCCEEECCSE-----EEECSSSCCSTTCCCCCCTTCCSSCEEEEESSS--CEEEEESCSSSCEE
T ss_pred cCEEEEeCCChhhccCccEEEEECCC-----CEEECCCCCCCCcEEECCCCCchhheEEEEcCC--EEEEEECCCCCCEE
Confidence 4577777642 22 789999887 689996 4799999999999999999999865 69999999999999
Q ss_pred eCCeecCCCCCCCCCCCCcEEccCCCeeeecc-ceeEEEe
Q 010270 250 LNSQPINHPDSGSRHWGKPMELTSGDIITLGT-TSSIHVQ 288 (514)
Q Consensus 250 vNg~~i~~p~~~~~~~g~~~~L~~GD~I~lG~-~~~~~~~ 288 (514)
|||+++.. ++.|++||+|.||. ..|+|..
T Consensus 84 vNg~~i~~----------~~~L~~GD~I~iG~~~~~~f~~ 113 (120)
T 1wln_A 84 VDGQRISE----------TTMLQSGMRLQFGTSHVFKFVD 113 (120)
T ss_dssp ETSCBCSS----------CEEECTTCEEEETTTEEEEEEC
T ss_pred ECCEEcCC----------CEECCCCCEEEECCceEEEEEC
Confidence 99999974 47999999999999 5555543
No 42
>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2
Probab=99.70 E-value=9e-17 Score=145.01 Aligned_cols=92 Identities=27% Similarity=0.394 Sum_probs=76.3
Q ss_pred CceEEEEEEeCCCCCeEEEcccCCCCCCcEEEcCCCCCCeEeCCcc----cccceeEEEEeCCcceEEEEeCCCCCceee
Q 010270 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSE----VSGKHALINWNPNKLKWELVDMGSLNGTLL 250 (514)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~----VSr~Ha~I~~~~~~~~~~l~Dl~StNGT~v 250 (514)
...|.|.. .|+..+ .+.+.... .++|||.++|||+|+++. |||+||+|.++.+ +.|+|+|++|+|||||
T Consensus 7 ~~~w~l~~-~G~~~~-~~~l~~~~----~~~IGR~~~~di~l~~~~~~~~VSr~Ha~i~~~~~-g~~~l~Dl~S~NGT~v 79 (138)
T 2pie_A 7 GRSWCLRR-VGMSAG-WLLLEDGC----EVTVGRGFGVTYQLVSKICPLMISRNHCVLKQNPE-GQWTIMDNKSLNGVWL 79 (138)
T ss_dssp CEEEEEEE-TTCSSC-BEEECTTC----CEEEESSSSSSEECCCSSCTTSSCSSCEEEEECTT-SCEEEEECSCSSCEEE
T ss_pred CccEEEEE-eCCCCC-EEEecCCC----eEEECCCCCCCEEeCCCCcCCCCChhHeEEEEcCC-CcEEEEECCCCCCeEE
Confidence 34566554 465544 66665331 689999999999999998 9999999999543 3699999999999999
Q ss_pred CCeecCCCCCCCCCCCCcEEccCCCeeeecc
Q 010270 251 NSQPINHPDSGSRHWGKPMELTSGDIITLGT 281 (514)
Q Consensus 251 Ng~~i~~p~~~~~~~g~~~~L~~GD~I~lG~ 281 (514)
||+++.+ ++++.|++||+|.||.
T Consensus 80 Ng~~l~~--------~~~~~L~~GD~I~lG~ 102 (138)
T 2pie_A 80 NRARLEP--------LRVYSIHQGDYIQLGV 102 (138)
T ss_dssp TTEECCT--------TCCEECCTTCEEEESC
T ss_pred CCEEcCC--------CCcEECCCCCEEEECC
Confidence 9999986 5779999999999998
No 43
>1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.66 E-value=2.9e-16 Score=139.63 Aligned_cols=97 Identities=27% Similarity=0.272 Sum_probs=76.7
Q ss_pred eEEEEEEeCCCCCeEEEcccC------CCCCCcEEEcCCCCCCeEeCCc-ccccceeEEEEeCCcceEEEEeCCCCCcee
Q 010270 177 CLSLEVVSGPSRGIRCSVQSA------NASRLPLTLGRVSPSDVLLKDS-EVSGKHALINWNPNKLKWELVDMGSLNGTL 249 (514)
Q Consensus 177 ~~~L~v~~G~~~g~~~~l~~~------~~~~~~~~IGR~~~~di~l~d~-~VSr~Ha~I~~~~~~~~~~l~Dl~StNGT~ 249 (514)
..+|....|......+..... ...+..++|||+++|||+|+++ .|||+||+|.++.+ +.|+|+|+ |+||||
T Consensus 5 ~~~L~~~~~~~p~~~l~~~~~~i~~~~~~~~~~~~IGR~~~~di~l~~~~~vSr~Ha~i~~~~~-g~~~l~Dl-S~NGT~ 82 (127)
T 1g6g_A 5 VCRVICTTGQIPIRDLSADISQVLKEKRSIKKVWTFGRNPACDYHLGNISRLSNKHFQILLGED-GNLLLNDI-STNGTW 82 (127)
T ss_dssp EEEEEESSSSSCCEEEEECHHHHHHCCSSCCEEEEEESSTTSSEECCSCTTSCSSCEEEEECTT-SCEEEEEC-CSSCCE
T ss_pred EEEEEECCCCCCceEeeccccceeeeeecCCCCEEECCCCCCCEEeCCCCCCChhHeEEEECCC-CcEEEEEC-CcCCeE
Confidence 356666677666555554411 0111268999999999999997 69999999999643 36999999 999999
Q ss_pred eCCeecCCCCCCCCCCCCcEEccCCCeeeeccce
Q 010270 250 LNSQPINHPDSGSRHWGKPMELTSGDIITLGTTS 283 (514)
Q Consensus 250 vNg~~i~~p~~~~~~~g~~~~L~~GD~I~lG~~~ 283 (514)
|||+++.+ ++++.|++||+|.||.+.
T Consensus 83 vNg~~l~~--------~~~~~L~~Gd~I~lG~~~ 108 (127)
T 1g6g_A 83 LNGQKVEK--------NSNQLLSQGDEITVGVGV 108 (127)
T ss_dssp ETTEECCT--------TCCEECCTTCEEEECTTS
T ss_pred ECCEEcCC--------CCeEEcCCCCEEEECCCc
Confidence 99999986 577999999999999974
No 44
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=99.60 E-value=2.3e-15 Score=157.72 Aligned_cols=90 Identities=23% Similarity=0.329 Sum_probs=79.2
Q ss_pred EEeCCCCCeEEEcccCCCCCCcEEEcCCCCCCeEeCCcccccceeEEEEeCCcceEEEEeCCCCCceeeCCeecCCCCCC
Q 010270 182 VVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPINHPDSG 261 (514)
Q Consensus 182 v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~Dl~StNGT~vNg~~i~~p~~~ 261 (514)
++.+ ..|+.+.+... .++|||.++|||+|+++.||++||.|.++++ .|+|+|++|+|||||||+++.
T Consensus 292 l~~~-~~g~~~~l~~~-----~~~iGR~~~~di~l~~~~vSr~Ha~i~~~~~--~~~l~Dl~S~nGt~vng~~i~----- 358 (388)
T 2ff4_A 292 LHDI-ASGRGYPLQAA-----ATRIGRLHDNDIVLDSANVSRHHAVIVDTGT--NYVINDLRSSNGVHVQHERIR----- 358 (388)
T ss_dssp EEET-TTCCEEECCSS-----EEEEESSTTSSEECCCTTSCTTCEEEEECSS--CEEEEECSCSSCCEETTEECS-----
T ss_pred EEEC-CCCcEEEECCC-----CEEEecCCCCeEEECCCccChhHeEEEEECC--EEEEEECCCCCCeEECCEECC-----
Confidence 3443 34789999887 7899999999999999999999999999865 699999999999999999995
Q ss_pred CCCCCCcEEccCCCeeeeccceeEEEee
Q 010270 262 SRHWGKPMELTSGDIITLGTTSSIHVQI 289 (514)
Q Consensus 262 ~~~~g~~~~L~~GD~I~lG~~~~~~~~~ 289 (514)
+++.|++||+|.||.+.+.|...
T Consensus 359 -----~~~~L~~gd~i~~G~~~~~~~~~ 381 (388)
T 2ff4_A 359 -----SAVTLNDGDHIRICDHEFTFQIS 381 (388)
T ss_dssp -----SEEEECTTCEEEETTEEEEEECS
T ss_pred -----CceECCCCCEEEECCEEEEEEeC
Confidence 34899999999999998887653
No 45
>4ejq_A Kinesin-like protein KIF1A; homodimer, FHA domain, transport protein; 1.89A {Homo sapiens} PDB: 2eh0_A 2g1l_A
Probab=99.54 E-value=1.8e-14 Score=132.40 Aligned_cols=95 Identities=16% Similarity=0.207 Sum_probs=75.0
Q ss_pred EEEEEEeC-CC-CC-eEEEcccCCCCCCcEEEcCCC---CCCeEeCCcccccceeEEEEeCCc--ceEEEEeCCCCCcee
Q 010270 178 LSLEVVSG-PS-RG-IRCSVQSANASRLPLTLGRVS---PSDVLLKDSEVSGKHALINWNPNK--LKWELVDMGSLNGTL 249 (514)
Q Consensus 178 ~~L~v~~G-~~-~g-~~~~l~~~~~~~~~~~IGR~~---~~di~l~d~~VSr~Ha~I~~~~~~--~~~~l~Dl~StNGT~ 249 (514)
.+|.-+.. |. .+ ..+.|..+ .++|||.. .|||+|+++.||++||.|.+++++ ..|++.|++|+||||
T Consensus 39 PhLvnLn~Dp~ls~~lvy~L~~g-----~t~IGR~~~~~~~DI~L~~~~Vs~~H~~i~~~~~~~~~~~~~~d~~S~ngt~ 113 (154)
T 4ejq_A 39 PHLVNLNEDPLMSECLLYYIKDG-----ITRVGREDGERRQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPCEGADTY 113 (154)
T ss_dssp CEEEECCCCTTCSSEEEEECCSE-----EEEEECSSCSSCCSEECCCTTCCSEEEEEEEECTTSSSCEEEEEECTTCCEE
T ss_pred ceEEEecCCcccCceEEEEeCCC-----CEEEcCCCCCCCCCEEECCCCcccccEEEEEecCCCceeEEEEecCCCCceE
Confidence 35555533 22 23 35667776 68999975 799999999999999999998653 258999999999999
Q ss_pred eCCeecCCCCCCCCCCCCcEEccCCCeeeeccce-eEEE
Q 010270 250 LNSQPINHPDSGSRHWGKPMELTSGDIITLGTTS-SIHV 287 (514)
Q Consensus 250 vNg~~i~~p~~~~~~~g~~~~L~~GD~I~lG~~~-~~~~ 287 (514)
|||++|.. ++.|++||+|.||.+. |+|.
T Consensus 114 VNG~~i~~----------~~~L~~GD~I~~G~~~~Frf~ 142 (154)
T 4ejq_A 114 VNGKKVTE----------PSILRSGNRIIMGKSHVFRFN 142 (154)
T ss_dssp ETTEECCS----------CEECCTTCEEEETTTEEEEEE
T ss_pred ECCEEcCC----------ceECCCCCEEEECCcEEEEEc
Confidence 99999974 4899999999999875 4443
No 46
>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A*
Probab=99.51 E-value=4.9e-14 Score=124.74 Aligned_cols=89 Identities=18% Similarity=0.253 Sum_probs=71.4
Q ss_pred EEEEEEeC-CCC--CeEEEcccCCCCCCcEEEcCCCCCCeEeCCcccccceeEEEEeCCcceEEEEeCCCCCceeeCCee
Q 010270 178 LSLEVVSG-PSR--GIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (514)
Q Consensus 178 ~~L~v~~G-~~~--g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~Dl~StNGT~vNg~~ 254 (514)
.+|..+.+ +.. ...+.|.. ..+|||.++|||+|+++.||++||.|.++.+ +.|+|+|++ +|||||||++
T Consensus 27 PhLvnLn~Dp~~s~~l~y~L~~------~t~IGR~~~~DI~L~~~~Vs~~Ha~I~~~~~-g~~~l~dl~-~ngt~VNG~~ 98 (124)
T 3fm8_A 27 CFLVNLNADPALNELLVYYLKE------HTLIGSANSQDIQLCGMGILPEHCIIDITSE-GQVMLTPQK-NTRTFVNGSS 98 (124)
T ss_dssp CEEEETTCCTTSSCCCEEECCS------EEEEESSTTCSEECCSTTCCSSCEEEEECTT-SCEEEEECT-TCCEEETTEE
T ss_pred cEEEEeCCCCccCceEEEECCC------CeEECCCCCCCEEECCCCeecceEEEEECCC-CeEEEEECC-CCCEEECCEE
Confidence 46666644 221 23566654 3699999999999999999999999999643 369999995 7999999999
Q ss_pred cCCCCCCCCCCCCcEEccCCCeeeecccee
Q 010270 255 INHPDSGSRHWGKPMELTSGDIITLGTTSS 284 (514)
Q Consensus 255 i~~p~~~~~~~g~~~~L~~GD~I~lG~~~~ 284 (514)
|.. ++.|++||+|.||...+
T Consensus 99 V~~----------~~~L~~GD~I~lG~~~~ 118 (124)
T 3fm8_A 99 VSS----------PIQLHHGDRILWGNNHF 118 (124)
T ss_dssp CCS----------CEEECTTCEEEETTTEE
T ss_pred cCC----------cEECCCCCEEEECCCeE
Confidence 974 48999999999997654
No 47
>4a0e_A YSCD, type III secretion protein; transport protein, SAD phasing, type III secretion system; 2.04A {Yersinia pestis} PDB: 4d9v_A
Probab=99.47 E-value=9.2e-14 Score=121.85 Aligned_cols=96 Identities=20% Similarity=0.281 Sum_probs=87.1
Q ss_pred ceEEEEEEeCCCCCeEEEcccCCCCCCcEEEcCCC-CCCeEeCCcccccceeEEEEeCCcceEEEEeCCCCCceeeCCee
Q 010270 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVS-PSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (514)
Q Consensus 176 ~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~-~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~Dl~StNGT~vNg~~ 254 (514)
..|+|.+++|+..|..+++..+ .++||.++ .|||+|.|+.||++||+|...++ +|+|+ +|+||||+||++
T Consensus 3 ~~~klrvlsG~~~G~~l~L~~~-----~~~IGs~~~~~DLvL~D~~Vs~~H~~L~~~~~--g~~L~--~s~ngt~vdG~~ 73 (123)
T 4a0e_A 3 GSWVCRFYQGKHRGVEVELPHG-----RCVFGSDPLQSDIVLSDSEIAPVHLVLMVDEE--GIRLT--DSAEPLLQEGLP 73 (123)
T ss_dssp CCEEEEECSGGGTTCEEEECSE-----EEEEESCTTTCSEECCCTTSCSSCEEEEEETT--EEEEE--EESSCCEETTEE
T ss_pred ceEEEEEecCCCCCcEEEcCCC-----cEEECCCCCCCCEEEeCCCccceeEEEEECCC--eEEEE--eccCCEEECCEE
Confidence 4689999999999999999987 89999999 99999999999999999999987 59998 689999999999
Q ss_pred cCCCCCCCCCCCCcEEccCCCeeeeccceeEEEeee
Q 010270 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQIT 290 (514)
Q Consensus 255 i~~p~~~~~~~g~~~~L~~GD~I~lG~~~~~~~~~~ 290 (514)
+.. ...|.+|+.+.+|.+.+.|....
T Consensus 74 v~~----------~~~L~~g~~l~lG~~~l~~~~~~ 99 (123)
T 4a0e_A 74 VPL----------GTLLRAGSCLEVGFLLWTFVAVG 99 (123)
T ss_dssp CCT----------TCBCCTTSCEEETTEEEEEEETT
T ss_pred ccc----------ccccCCCCEEEEccEEEEEEcCC
Confidence 874 23899999999999999887643
No 48
>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A*
Probab=99.42 E-value=3.5e-13 Score=135.28 Aligned_cols=96 Identities=17% Similarity=0.186 Sum_probs=77.1
Q ss_pred eEEEEEEeCCCCCeEEEcccCCCCCCcEEEcCCCCCC---eEeCCcccccceeEEEEeCC---------cceEEEEeCCC
Q 010270 177 CLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSD---VLLKDSEVSGKHALINWNPN---------KLKWELVDMGS 244 (514)
Q Consensus 177 ~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~d---i~l~d~~VSr~Ha~I~~~~~---------~~~~~l~Dl~S 244 (514)
||.|+...+...|+++.|..+ .++|||...++ |+++|+.|||+||+|.++.. ...++|+|++|
T Consensus 1 MWiL~~~~d~~~Gkr~~L~pg-----~YlIGR~~~~~~~lI~idD~SISRqHA~I~v~~v~~~dg~~~~~~~l~I~DLgS 75 (325)
T 3huf_A 1 MWIIEAEGDILKGKSRILFPG-----TYIVGRNVSDDSSHIQVISKSISKRHARFTILTPSEKDYFTGGPCEFEVKDLDT 75 (325)
T ss_dssp CEEEEESTTTTTTCCEEECSE-----EEEEESSCCCBTTEEECCCTTSCSSCEEEEECCCCHHHHHHCCCCCEEEEECSC
T ss_pred CcEEeccCccCCCeEEEecCC-----eEEECCCCCccCceeecCCCCccccceEEEEecccccccccCCcceEEEEECCC
Confidence 588887433457899999887 69999997543 69999999999999998631 12599999999
Q ss_pred CCceeeCCeecCCCCCCCCCCCCcEEc-cCCCeeeeccceeEE
Q 010270 245 LNGTLLNSQPINHPDSGSRHWGKPMEL-TSGDIITLGTTSSIH 286 (514)
Q Consensus 245 tNGT~vNg~~i~~p~~~~~~~g~~~~L-~~GD~I~lG~~~~~~ 286 (514)
+|||||||+++.. ....| .+||.|+||.+...|
T Consensus 76 knGTfVNGerI~~---------~~~~L~~dgd~I~fG~~~~~f 109 (325)
T 3huf_A 76 KFGTKVNEKVVGQ---------NGDSYKEKDLKIQLGKCPFTI 109 (325)
T ss_dssp SSCEEETTEECCT---------TCEEECSSEEEEEETTCSSCE
T ss_pred CCCEEECCEECCC---------ceeeecCCCCEEEecCCcceE
Confidence 9999999999973 44555 589999999976644
No 49
>3uv0_A Mutator 2, isoform B; FHA, protein binding, dimerization; 1.90A {Drosophila melanogaster}
Probab=99.23 E-value=1.9e-11 Score=102.61 Aligned_cols=76 Identities=13% Similarity=0.168 Sum_probs=61.7
Q ss_pred EEcccCCCCCCcEEEcCCCCCCeEeCCcccccceeEEEEeCCcceEEEEeCCCCCce-eeCCeecCCCCCCCCCCCCcEE
Q 010270 192 CSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGT-LLNSQPINHPDSGSRHWGKPME 270 (514)
Q Consensus 192 ~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~Dl~StNGT-~vNg~~i~~p~~~~~~~g~~~~ 270 (514)
..+..+. -++|||.+.|+++|+++.||+.||.|....++ .++. . |+||| ||||+++.. +.
T Consensus 15 v~l~~~~----~~rIGR~~~~~l~LddpsVs~~HAti~~~~~G--~~~l-~-S~nGtVFVNGqrv~~-----------~~ 75 (102)
T 3uv0_A 15 ILLKADT----IYRIGRQKGLEISIADESMELAHATACILRRG--VVRL-A-ALVGKIFVNDQEETV-----------VD 75 (102)
T ss_dssp EECCTTC----CEEEESSTTSTEECCCTTSCTTCEEEEEEETT--EEEE-E-ESSSCEEETTEEESE-----------EE
T ss_pred EEeecCc----EEEEcCCCCCcEEECCcccccceEEEEecCCc--eEEE-E-eccCcEEECCEEeee-----------EE
Confidence 4455543 68999999999999999999999999998763 4443 2 99995 999999953 89
Q ss_pred ccCCCe------eeeccceeEE
Q 010270 271 LTSGDI------ITLGTTSSIH 286 (514)
Q Consensus 271 L~~GD~------I~lG~~~~~~ 286 (514)
|.+||. +.||..+-.+
T Consensus 76 I~~gDtI~g~v~lrFGnvea~l 97 (102)
T 3uv0_A 76 IGMENAVAGKVKLRFGNVEARL 97 (102)
T ss_dssp ECGGGCBTTEEEEEETTEEEEE
T ss_pred ccCCcccccEEEEEecCEEEEE
Confidence 999999 7788776543
No 50
>3kt9_A Aprataxin; FHA domain, beta sandwich, beta sheet, AMP hydrolase, alternative splicing, disease mutation, DNA damage, DNA repair, DNA-binding; 1.65A {Homo sapiens} SCOP: b.26.1.0
Probab=99.16 E-value=1.9e-10 Score=98.01 Aligned_cols=92 Identities=16% Similarity=0.195 Sum_probs=75.5
Q ss_pred EEEEEEeCCCCCeEEEcccCCCCCCcEEEcCCCCCCeEeCCcccccceeEEEEeCCcceEEEEeCCCCCceeeCCeecCC
Q 010270 178 LSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPINH 257 (514)
Q Consensus 178 ~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~Dl~StNGT~vNg~~i~~ 257 (514)
..|...++. ...+.|..+. .++|||++.+.| .|..+||+|++|..+.+++.+.|.|+| +|++++||+++.+
T Consensus 5 c~L~~~~~~--~~~I~L~~g~----~v~iGR~p~t~I--~DkrcSR~h~~L~~~~~~g~v~vk~lg-~Np~~vng~~l~k 75 (102)
T 3kt9_A 5 CWLVRQDSR--HQRIRLPHLE----AVVIGRGPETKI--TDKKCSRQQVQLKAECNKGYVKVKQVG-VNPTSIDSVVIGK 75 (102)
T ss_dssp EEEEETTST--TCEEECCBTC----EEEECSSTTTCC--CCTTSCSSCEEEEEETTTTEEEEEECS-SSCCEETTEECCB
T ss_pred EEEEecCCC--CCcEEcCCCC----cEEeccCCcccc--ccCcccCcceEEEEecCCCEEEEEECc-CCCCeECCEEcCC
Confidence 345555553 4578887773 578999998866 699999999999999866678999995 8999999999987
Q ss_pred CCCCCCCCCCcEEccCCCeeeeccceeEE
Q 010270 258 PDSGSRHWGKPMELTSGDIITLGTTSSIH 286 (514)
Q Consensus 258 p~~~~~~~g~~~~L~~GD~I~lG~~~~~~ 286 (514)
++.+.|++||+|.|-.-.+.|
T Consensus 76 --------~~~~~L~~GD~l~Ll~~~~~~ 96 (102)
T 3kt9_A 76 --------DQEVKLQPGQVLHMVNELYPY 96 (102)
T ss_dssp --------TCEEEECTTCCEEEETTEEEE
T ss_pred --------CCeEEeCCCCEEEEccCCceE
Confidence 788999999999988776544
No 51
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.12 E-value=1e-10 Score=122.79 Aligned_cols=95 Identities=19% Similarity=0.150 Sum_probs=76.3
Q ss_pred CceEEEEEEeCCCCCeEEEcccCCCCCCcEEEcCCCCCCeEeCCccc---------ccceeEEEEeCCc---ceEEEEeC
Q 010270 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEV---------SGKHALINWNPNK---LKWELVDM 242 (514)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~V---------Sr~Ha~I~~~~~~---~~~~l~Dl 242 (514)
.++.+|.++.+. ...+.+... .++|||.++||++++|+.| |++||+|.++.+. ..|+|+|
T Consensus 8 ~~~g~l~~~~~~--~~~~~l~~~-----~~~iGR~~~~~~~~~~~~~~~~~~~~~vS~~H~~i~~~~~~~~~~~~~i~D- 79 (419)
T 3i6u_A 8 APWARLWALQDG--FANLECVND-----NYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIED- 79 (419)
T ss_dssp CCSEEEEECSSS--SCCEEECSS-----EEEEESSTTSSEETTCTTGGGCSGGGGSCTTCEEEECCEETTTEECCEEEE-
T ss_pred CCceEeeecCCC--CCceEecCC-----CEEecCCCccCEEECCcccccccccccccccceEEEEEcCCCCceEEEEEE-
Confidence 345677666554 236777776 7899999999999999876 9999999765321 2399999
Q ss_pred CCCCceeeCCeecCCCCCCCCCCCCcEEccCCCeeeeccceeE
Q 010270 243 GSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSI 285 (514)
Q Consensus 243 ~StNGT~vNg~~i~~p~~~~~~~g~~~~L~~GD~I~lG~~~~~ 285 (514)
.|+|||||||+.+.+ +....|.+||.+.+|.+...
T Consensus 80 ~S~nGt~vn~~~~~~--------~~~~~l~~~d~i~~~~~~~~ 114 (419)
T 3i6u_A 80 HSGNGTFVNTELVGK--------GKRRPLNNNSEIALSLSRNK 114 (419)
T ss_dssp CCSSCEEETTEECCT--------TCEEECCTTEEEEESSTTCE
T ss_pred CCcCCceECcccccC--------CCcccCCCCCEeeeeccccc
Confidence 799999999999986 56789999999999987654
No 52
>2brf_A Bifunctional polynucleotide phosphatase/kinase; hydrolase/transferase, FHA, forkhead-associated, PNKP, PNK, polynucleotide kinase 3' phosphatase; 1.40A {Homo sapiens} SCOP: b.26.1.2 PDB: 2w3o_A* 1yjm_A*
Probab=99.02 E-value=9e-10 Score=94.85 Aligned_cols=93 Identities=22% Similarity=0.265 Sum_probs=73.3
Q ss_pred ceEEEEEEeCCCCCeEEEcc--cCCCCCCcEEEcCCCCCCeEeCCcccccceeEEEEeCCcceEEEEeCCCCCceeeCCe
Q 010270 176 SCLSLEVVSGPSRGIRCSVQ--SANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQ 253 (514)
Q Consensus 176 ~~~~L~v~~G~~~g~~~~l~--~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~Dl~StNGT~vNg~ 253 (514)
....|+.+++... .+.|. .+ ..+|||.+... +.|..+||+|+++..+..++.+.+.|+| +|++++||+
T Consensus 8 ~~c~L~~~~~~~~--~I~Lp~~~g-----~~viGR~p~t~--I~DkrcSR~hv~L~ad~~~~~v~vk~lG-~Np~~vng~ 77 (110)
T 2brf_A 8 GRLWLESPPGEAP--PIFLPSDGQ-----ALVLGRGPLTQ--VTDRKCSRTQVELVADPETRTVAVKQLG-VNPSTTGTQ 77 (110)
T ss_dssp CEEEEECSTTSSC--CEECCSTTC-----CEEECSBTTTT--BCCTTSCSSCEEEEEETTTTEEEEEECS-SSCCEEC-C
T ss_pred cEEEEEeCCCCCC--cEEeccCCC-----CEEEcCCCCcc--cccccceeeeEEEEEecCCCEEEEEEcc-cCCcEECCE
Confidence 3456666666533 77774 34 78999998554 6899999999999998877789999995 799999999
Q ss_pred ecCCCCCCCCCCCCcEEccCCCeeee--ccceeEE
Q 010270 254 PINHPDSGSRHWGKPMELTSGDIITL--GTTSSIH 286 (514)
Q Consensus 254 ~i~~p~~~~~~~g~~~~L~~GD~I~l--G~~~~~~ 286 (514)
++.+ ++++.|++||+|.| |.+.+.+
T Consensus 78 ~l~k--------~~~~~L~~GD~leLl~g~y~~~v 104 (110)
T 2brf_A 78 ELKP--------GLEGSLGVGDTLYLVNGLHPLTL 104 (110)
T ss_dssp BCCT--------TCEEEEETTCEEEEETTEEEEEE
T ss_pred EcCC--------CCEEEecCCCEEEEccCCeEEEE
Confidence 9987 78999999999997 5444443
No 53
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=98.93 E-value=3.5e-09 Score=102.83 Aligned_cols=154 Identities=15% Similarity=0.107 Sum_probs=95.1
Q ss_pred eeeeeeeecchhhhhcCCccCCCCceEEEEcCCCCCCCceEEEEecCCCchHHHHHHHHHHHHHHHHHHhhhhhhhhhcc
Q 010270 297 IPFGVGVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLS 376 (514)
Q Consensus 297 ~~~~vG~as~~~~~~r~G~R~~nED~~~v~~~~~~~~~~~lfgVfDGHGG~~aa~~as~~l~~~L~~~l~~~~~~e~~~~ 376 (514)
..+.+|+++-. +..+..+.|.|.+... .+...+|+|+||+|+...|..++..+...+...+....
T Consensus 6 ~~i~~~~~~~~-----~p~~~v~GD~y~~~~~---~~~~~~~~vaDg~G~G~~aa~~s~~~~~~l~~~~~~~~------- 70 (242)
T 3t91_A 6 YRVSTGAAHAA-----KGGGLVSGDSYSMMEL---GARKYAAAISDGMGNGARAHFESNETIKLLEKILESGI------- 70 (242)
T ss_dssp CEEEEEEEEEC-----TTSCSCCSCEEEEEEE---TTTEEEEEEECC-----CCSEEECHHHHHHHHHHHHTC-------
T ss_pred EEEEEEeehhc-----CCccccCCcEEEEEEe---CCCeEEEEEEeeCCCCHHHHHHHHHHHHHHHHHHHhCC-------
Confidence 34556666653 3456789999987532 23456799999999888888888777777766443221
Q ss_pred cccHHHHHHHHHHHHHHHhhhc---cCCCceEEEEEEecCCCceEEEEEEeccceEEEEeCCeEEEcCCCCCCCCHHHHH
Q 010270 377 QCDASDVLRDAFFQTEASMNHH---YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERL 453 (514)
Q Consensus 377 ~~~i~~~L~~af~~~d~~i~~~---~~G~TAtv~li~~~~~~~~~l~vANvGDSRa~L~r~g~~~~LT~DH~~~~~~E~~ 453 (514)
++ ..++..+|..+... ..++|++++++....++ ++++|+|||++|++|+|+..+++.++.+.
T Consensus 71 --~~----~~~l~~~n~~l~~~~~~~~~~T~~~~~id~~~~~---l~~~~aG~~~~~l~r~g~~~~l~~~~~~l------ 135 (242)
T 3t91_A 71 --DE----KIAIKTINSILSLRTTDEIYSTLDLSIIDLQDAS---CKFLKVGSTPSFIKRGDQVMKVQASNLPI------ 135 (242)
T ss_dssp --CH----HHHHHHHHHHHTTC----CCCCEEEEEEETTTCE---EEEEEESCCCEEEEETTEEEECCCC----------
T ss_pred --CH----HHHHHHHHHHHHhcCCCCeEeEEEEEEEECCCCE---EEEEcCCCCceEEEECCEEEEecCCCcee------
Confidence 12 33455566666543 34577777666543433 89999999999999999999998765442
Q ss_pred HHHHcCCCcccCccccccccccccCCCEEeeecCC
Q 010270 454 RIQETGEPLKDGETRLCGLNLARMLGDKFLKQQDA 488 (514)
Q Consensus 454 RI~~agg~v~~g~~Rv~GL~vsRslGD~~lK~~dg 488 (514)
|..... .+.-..+.-.-||.++.|+||
T Consensus 136 ------G~~~~~--~~~~~~~~l~~GD~lll~SDG 162 (242)
T 3t91_A 136 ------GIINEF--DVEVVSEQLKAGDLLIMMSDG 162 (242)
T ss_dssp -------CCCTT--CEEEEEEECCTTCEEEEECHH
T ss_pred ------EecCCC--cceEEEEEeCCCCEEEEECCC
Confidence 111111 111134456789999999998
No 54
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=98.89 E-value=3.8e-08 Score=96.07 Aligned_cols=155 Identities=14% Similarity=0.067 Sum_probs=101.6
Q ss_pred eeeeeeeeecchhhhhcCCccCCCCceEEEEcCCCCCCCceEEEEecCCCchHHHHHHHHHHHHHHHHHHhhhhhhhhhc
Q 010270 296 QIPFGVGVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLL 375 (514)
Q Consensus 296 ~~~~~vG~as~~~~~~r~G~R~~nED~~~v~~~~~~~~~~~lfgVfDGHGG~~aa~~as~~l~~~L~~~l~~~~~~e~~~ 375 (514)
+..+.+|+++-. +..+..+.|.|.+... .+...+|+|+||+|+...|..++..+...+...+....
T Consensus 8 ~~~~~~~~~~~~-----~~~~~vgGD~y~~~~~---~~~~~~~~vaD~~G~G~~aa~~s~~~~~~l~~~~~~~~------ 73 (242)
T 3pu9_A 8 PVTIELAVAKTH-----KFGTRESGDTVELVER---PGGGFSAVLVDGQGSGAGAKRLSLLVAGAAVRLLNEGV------ 73 (242)
T ss_dssp CEEEEEEEEEEC-----CTTCSSCSEEEEEEEC---TTSEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTC------
T ss_pred CcEEEEEEEecc-----cCccccCCceEEEEEe---CCCEEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHcCC------
Confidence 455666666653 3455678899987532 23456799999999999999999988888776554322
Q ss_pred ccccHHHHHHHHHHHHHHHhhhc---cCCCceEEEEEEecCCCceEEEEEEeccceEEEEeCCeEEEcCCCCCCCCHHHH
Q 010270 376 SQCDASDVLRDAFFQTEASMNHH---YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSER 452 (514)
Q Consensus 376 ~~~~i~~~L~~af~~~d~~i~~~---~~G~TAtv~li~~~~~~~~~l~vANvGDSRa~L~r~g~~~~LT~DH~~~~~~E~ 452 (514)
++. .++..+|..+... ...+|++++.+...... ++++|+||+++|+.++|+..+|+.+|.+.-
T Consensus 74 ---~~~----~~l~~~n~~l~~~~~~~~~~T~~~~~id~~~~~---l~~~~aG~~~~~l~r~g~~~~l~~~~~~lG---- 139 (242)
T 3pu9_A 74 ---RDG----AAARAAHDFLYAMRDGKVSAALDILSVDLASRS---VLVTRNSEVPMLLGRNGEFEQISESGGRIG---- 139 (242)
T ss_dssp ---CHH----HHHHHHHHHHHHHTTTCCCEEEEEEEEETTTTE---EEEEEESCCCEEEEETTEEEEECCCCCCBS----
T ss_pred ---CHH----HHHHHHHHHHHhccCCCcEEEEEEEEEECCCCE---EEEEeCCCCcEEEEECCEEEEeCCCCcccc----
Confidence 122 3444445444332 23455555554333333 789999999999999999999999886531
Q ss_pred HHHHHcCCCcccCccccccccccccCCCEEeeecCC
Q 010270 453 LRIQETGEPLKDGETRLCGLNLARMLGDKFLKQQDA 488 (514)
Q Consensus 453 ~RI~~agg~v~~g~~Rv~GL~vsRslGD~~lK~~dg 488 (514)
...+. .+.-..+.-.-||.++.|+||
T Consensus 140 --------~~~~~--~~~~~~~~l~~Gd~lll~TDG 165 (242)
T 3pu9_A 140 --------IYRHT--RPRVLEFPAEPGLTVILVSDG 165 (242)
T ss_dssp --------SCTTC--CCEEEEEECCTTCEEEEECHH
T ss_pred --------ccCCC--CceEEEEEeCCCCEEEEECcC
Confidence 11111 111134456689999999998
No 55
>4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens}
Probab=98.88 E-value=8.5e-09 Score=97.14 Aligned_cols=91 Identities=18% Similarity=0.254 Sum_probs=70.7
Q ss_pred EEEEEEeC-CC-CC-eEEEcccCCCCCCcEEEcCCC---CCCeEeCCcccccceeEEEEeCCc---ceEEEEeCCCCCce
Q 010270 178 LSLEVVSG-PS-RG-IRCSVQSANASRLPLTLGRVS---PSDVLLKDSEVSGKHALINWNPNK---LKWELVDMGSLNGT 248 (514)
Q Consensus 178 ~~L~v~~G-~~-~g-~~~~l~~~~~~~~~~~IGR~~---~~di~l~d~~VSr~Ha~I~~~~~~---~~~~l~Dl~StNGT 248 (514)
.+|.-+.. |. .+ ..|.|..+ ..+|||.. .+||+|..+.|+++||.|..++++ +.++|.+. +.+.|
T Consensus 69 PhLvnLn~Dp~ls~~l~y~L~~g-----~t~VGr~~~~~~~dI~L~G~~I~~~Hc~i~~~~~~~~~~~vtl~p~-~~a~t 142 (184)
T 4egx_A 69 PHLVNLNEDPLMSECLLYYIKDG-----ITRVGREDGERRQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPC-EGADT 142 (184)
T ss_dssp CEEEECCCCTTCSSCSEEECCSE-----EEEEECSSSSSCCSEECCSTTCCSEEEEEEEECCSSCSCEEEEEEC-TTCCE
T ss_pred ceEEeccCCcccCceEEEEECCC-----cCcCCCCCcCCCCeEEECccccccccEEEEEcCCCCceEEEEEeeC-CCCeE
Confidence 45655533 22 22 36777776 67999964 689999999999999999987643 34778877 56889
Q ss_pred eeCCeecCCCCCCCCCCCCcEEccCCCeeeecccee
Q 010270 249 LLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSS 284 (514)
Q Consensus 249 ~vNg~~i~~p~~~~~~~g~~~~L~~GD~I~lG~~~~ 284 (514)
||||++|.. ++.|++||+|.||...+
T Consensus 143 ~VNG~~I~~----------~~~L~~GDrI~lG~~h~ 168 (184)
T 4egx_A 143 YVNGKKVTE----------PSILRSGNRIIMGKSHV 168 (184)
T ss_dssp EETTEECCS----------CEECCTTCEEEETTTEE
T ss_pred EEcCEEccc----------cEEcCCCCEEEECCCCE
Confidence 999999974 59999999999998753
No 56
>1ujx_A Polynucleotide kinase 3'-phosphatase; DNA repair, FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif; NMR {Mus musculus} SCOP: b.26.1.2
Probab=98.85 E-value=4.7e-09 Score=91.49 Aligned_cols=95 Identities=20% Similarity=0.245 Sum_probs=75.5
Q ss_pred CceEEEEEEeCCCCCeEEEcc--cCCCCCCcEEEcCCCCCCeEeCCcccccceeEEEEeCCcceEEEEeCCCCCceeeCC
Q 010270 175 RSCLSLEVVSGPSRGIRCSVQ--SANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNS 252 (514)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~--~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~Dl~StNGT~vNg 252 (514)
+...+|+.+++... .+.|. .+ +++|||.+.. .|.|..+||+|+++.++..++.+.+.+++ +|+|++||
T Consensus 14 ~~~c~L~~~~~~~~--~I~Lp~~~g-----~~viGRgp~t--~I~DkrcSR~qv~L~ad~~~~~v~vk~lG-~NP~~vng 83 (119)
T 1ujx_A 14 RGRLWLQSPTGGPP--PIFLPSDGQ-----ALVLGRGPLT--QVTDRKCSRNQVELIADPESRTVAVKQLG-VNPSTVGV 83 (119)
T ss_dssp CCCEEEECCSSSCC--CCCCCTTSC-----CEEESBBTTT--TBCCTTSCTTSEEEEEETTTTEEEEEECS-SSCCBSSS
T ss_pred cceEEEEeCCCCCC--cEEeccCCC-----CEEEcCCCCc--ccccccccceeEEEEEecCCCEEEEEEcc-cCCcEECC
Confidence 45567887777643 55664 33 7899999854 46899999999999999877789999995 79999999
Q ss_pred eecCCCCCCCCCCCCcEEccCCCeee--eccceeEEE
Q 010270 253 QPINHPDSGSRHWGKPMELTSGDIIT--LGTTSSIHV 287 (514)
Q Consensus 253 ~~i~~p~~~~~~~g~~~~L~~GD~I~--lG~~~~~~~ 287 (514)
+++.+ ++++.|++||+|. .|.+.+.+.
T Consensus 84 ~~l~k--------~~~~~L~~GD~l~Ll~g~y~~~v~ 112 (119)
T 1ujx_A 84 QELKP--------GLSGSLSLGDVLYLVNGLYPLTLR 112 (119)
T ss_dssp SBCCT--------TCEEEEETTCCCBCBTTBSCCEEE
T ss_pred EEecC--------CCEEEecCCCEEEEecCCeEEEEE
Confidence 99987 7889999999998 455555443
No 57
>1yj5_C 5' polynucleotide kinase-3' phosphatase FHA domai; beta sandwich, P-loop, transferase; 2.80A {Mus musculus} SCOP: b.26.1.2
Probab=98.84 E-value=1.2e-08 Score=91.11 Aligned_cols=95 Identities=20% Similarity=0.264 Sum_probs=75.4
Q ss_pred CceEEEEEEeCCCCCeEEEcc--cCCCCCCcEEEcCCCCCCeEeCCcccccceeEEEEeCCcceEEEEeCCCCCceeeCC
Q 010270 175 RSCLSLEVVSGPSRGIRCSVQ--SANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNS 252 (514)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~--~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l~Dl~StNGT~vNg 252 (514)
+...+|+.+.|... .+.|. .+ .++|||.+.. .|.|..+||+|++|.++..++.+.|.++| +|+++|||
T Consensus 7 ~~~c~L~p~d~~~~--~I~Lp~~~g-----~vvIGRgPet--~ItDkRcSR~qv~L~ad~~~g~V~Vk~lG-~NP~~vng 76 (143)
T 1yj5_C 7 RGRLWLQSPTGGPP--PIFLPSDGQ-----ALVLGRGPLT--QVTDRKCSRNQVELIADPESRTVAVKQLG-VNPSTVGV 76 (143)
T ss_dssp CEEEEEECCTTSCC--CEECCTTTC-----EEEECSBTTT--TBCCSSSCSSCEEEEEETTTTEEEEEECS-SSCCEETT
T ss_pred CCeEEEEecCCCCC--cEEeccCCC-----CEEEcCCCcc--ccccccccceeEEEEEecCCCeEEEEEcc-cCCcEECC
Confidence 34566777776533 67774 34 7899999844 57799999999999998877778899995 79999999
Q ss_pred eecCCCCCCCCCCCCcEEccCCCeeee--ccceeEEE
Q 010270 253 QPINHPDSGSRHWGKPMELTSGDIITL--GTTSSIHV 287 (514)
Q Consensus 253 ~~i~~p~~~~~~~g~~~~L~~GD~I~l--G~~~~~~~ 287 (514)
+.+.+ +..+.|++||+|.| |.+.+.+.
T Consensus 77 ~~L~k--------~~~~~L~~GD~LeLl~g~y~f~V~ 105 (143)
T 1yj5_C 77 HELKP--------GLSGSLSLGDVLYLVNGLYPLTLR 105 (143)
T ss_dssp EECCT--------TCEEEECTTCEEESSSSCSEEEEE
T ss_pred EEecC--------CCEEEecCCCEEEEecCCceEEEE
Confidence 99987 78899999999984 55554443
No 58
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=98.75 E-value=8.2e-09 Score=101.09 Aligned_cols=72 Identities=14% Similarity=0.052 Sum_probs=60.6
Q ss_pred cEEEcCCCCCCeEeCCcccccceeEEEEeC-Cc-ceEEEEeCCCCCce-eeCCeecCCCCCCCCCCCCcEEcc-CCCeee
Q 010270 203 PLTLGRVSPSDVLLKDSEVSGKHALINWNP-NK-LKWELVDMGSLNGT-LLNSQPINHPDSGSRHWGKPMELT-SGDIIT 278 (514)
Q Consensus 203 ~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~-~~-~~~~l~Dl~StNGT-~vNg~~i~~p~~~~~~~g~~~~L~-~GD~I~ 278 (514)
.++|||.+.|||+|+++ + ||.+..+. .+ +.|+|+|++|+||| ||||+++.. +..|+ .||.|.
T Consensus 93 ~itIG~~~~~dI~l~~~-~---~~~~~~~~~~~~~~~~l~~l~s~ngtvyvNg~~i~~----------~~~L~~~GD~I~ 158 (238)
T 1wv3_A 93 TMTIGPNAYDDMVIQSL-M---NAIIIKDFQSIQESQYVRIVHDKNTDVYINYELQEQ----------LTNKAYIGDHIY 158 (238)
T ss_dssp EEEEESSTTSSEECTTC-S---SCEEEECGGGHHHHCEEEEECCTTCCEEETTEECCS----------SEEEEETTCEEE
T ss_pred eEEEeCCCCCeEEeCCC-e---eEEEEecccCcCCcEEEEEccCCCCCEEECCEEecc----------ceeccCCcCEEE
Confidence 78999999999999988 3 58777771 10 25999999999997 999999974 47899 999999
Q ss_pred eccceeEEEe
Q 010270 279 LGTTSSIHVQ 288 (514)
Q Consensus 279 lG~~~~~~~~ 288 (514)
+|+..+.|..
T Consensus 159 ig~~~~~~~~ 168 (238)
T 1wv3_A 159 VEGIWLEVQA 168 (238)
T ss_dssp ETTEEEEECS
T ss_pred ECCEEEEEEC
Confidence 9999887754
No 59
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=98.38 E-value=4.2e-06 Score=81.70 Aligned_cols=149 Identities=14% Similarity=0.024 Sum_probs=87.1
Q ss_pred CCCCceEEEEcCCCCCCCceEEEEecCCCchHHHHHHHHHHHHHHHHHHhhhhhhhhhcccccHHHHHHHHHHHHHHHhh
Q 010270 317 LPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMN 396 (514)
Q Consensus 317 ~~nED~~~v~~~~~~~~~~~lfgVfDGHGG~~aa~~as~~l~~~L~~~l~~~~~~e~~~~~~~i~~~L~~af~~~d~~i~ 396 (514)
...-|.|.+... .+...+++|+||+|+...|..++..+...+...+..... . ..........++..+|..+.
T Consensus 49 ~vgGD~yd~~~~---~~~~~~~~vaD~~GhG~~aa~~s~~~~~~~~~~~~~~~~-~----~~~~~~~p~~~l~~ln~~l~ 120 (255)
T 3f79_A 49 YLSGDFVDYFRV---DERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRR-N----GTLPEFKPSEVLAHINRGLI 120 (255)
T ss_dssp SSCSEEEEEEEE---TTTEEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHHTT-C----CC----CHHHHHHHHHHHHB
T ss_pred hcCceEEeEEEe---CCCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHhhcc-c----cccccCCHHHHHHHHHHHHH
Confidence 456687755422 245678999999998888888888777777655432110 0 00112234556677788777
Q ss_pred hccCCCceEEEEEEecCCCceEEEEEEecc-ceEEEEeCCeEEEcCCCCCCCCHHHHHHHHHcCCCcccCcccccccccc
Q 010270 397 HHYEGCTATVLLVWADGNANIFAQCANVGD-SACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCGLNLA 475 (514)
Q Consensus 397 ~~~~G~TAtv~li~~~~~~~~~l~vANvGD-SRa~L~r~g~~~~LT~DH~~~~~~E~~RI~~agg~v~~g~~Rv~GL~vs 475 (514)
....|+.+|+++...+.... .++++|+|+ ++.|+.++|+..+++.+|.+- |...+. .+.-..+.
T Consensus 121 ~~~~~~~~T~~~~~id~~~~-~l~~~~aGh~p~~~l~~~g~~~~l~~~~~~l------------G~~~~~--~~~~~~~~ 185 (255)
T 3f79_A 121 NTKLGKHVTMLGGVIDLEKN-SLTYSIGGHLPLPVLFVEGQAGYLEGRGLPV------------GLFDDA--TYDDRVME 185 (255)
T ss_dssp TTBSSCCEEEEEEEEETTTT-EEEEEECSCSCCCEEEC--CEEECCC-----------------CCSSCC--CCCC---B
T ss_pred hcCCCCEEEEEEEEEECCCC-EEEEEeCCCCCceEEEeCCeEEEeCCCCceE------------EEcCCC--ceEEEEEE
Confidence 65555555555544442211 288999999 568999999999999887652 221111 11113455
Q ss_pred ccCCCEEeeecCC
Q 010270 476 RMLGDKFLKQQDA 488 (514)
Q Consensus 476 RslGD~~lK~~dg 488 (514)
-.-||.++.|+||
T Consensus 186 l~~gd~lll~TDG 198 (255)
T 3f79_A 186 LPPSFSLSLFSDG 198 (255)
T ss_dssp CCSSEEEEEECSC
T ss_pred ECCCCEEEEECCC
Confidence 6789999999999
No 60
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=98.13 E-value=8.5e-05 Score=69.69 Aligned_cols=148 Identities=20% Similarity=0.181 Sum_probs=93.1
Q ss_pred eeeeeecchhhhhcCCccCCCCceEEEEcCCCCCCCceEEEEecCCCchHHHHHHHHHHHHHHHHHHhhhhhhhhhcccc
Q 010270 299 FGVGVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQC 378 (514)
Q Consensus 299 ~~vG~as~~~~~~r~G~R~~nED~~~v~~~~~~~~~~~lfgVfDGHGG~~aa~~as~~l~~~L~~~l~~~~~~e~~~~~~ 378 (514)
+.+|.++-+ +-.+..+.|.|.+.. .++..+++|+||.|....|..++..+...+.+. . ..
T Consensus 4 ~~~~~~~~p-----~~~~~v~GD~y~~~~----~~~~~~~~v~Dv~GhG~~Aa~~s~~~~~~l~~~----~-------~~ 63 (193)
T 3zt9_A 4 LEVGIYTRA-----REGEIACGDACLVKR----VEGVIFLAVGDGIGHGPEAARAAEIAIASMESS----M-------NT 63 (193)
T ss_dssp CCEEEEEEC-----CTTCSSCSEEEEEEE----ETTEEEEEEEEESSSHHHHHHHHHHHHHHHHHH----T-------TS
T ss_pred cEEEEEEec-----cCCCCCCCCeEEEEE----eCCEEEEEEEeCCCCCHHHHHHHHHHHHHHHHc----c-------cC
Confidence 455665543 234567889998853 245688999999997777777777776666442 0 01
Q ss_pred cHHHHHHHHHHHHHHHhhhccCCCceEEEEEEecCCCceEEEEEEeccceEEEEeCCeEEEcCCCCCCCCHHHHHHHHHc
Q 010270 379 DASDVLRDAFFQTEASMNHHYEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQET 458 (514)
Q Consensus 379 ~i~~~L~~af~~~d~~i~~~~~G~TAtv~li~~~~~~~~~l~vANvGDSRa~L~r~g~~~~LT~DH~~~~~~E~~RI~~a 458 (514)
++. ..+..+|..+.. ..|+|++++.+...... +.++|+|+++.|++++++...+...+.+-
T Consensus 64 ~p~----~il~~ln~~l~~-~~~~t~~~~~id~~~~~---l~~~~aGh~~~~l~~~~~~~~l~~~~g~l----------- 124 (193)
T 3zt9_A 64 GLV----NIFQLCHRELRG-TRGAVAALCRVDRRQGL---WQAAIVGNIHVKILSAKGIITPLATPGIL----------- 124 (193)
T ss_dssp CHH----HHHHHHHHHHTT-SSCEEEEEEEEETTTTE---EEEEEESSCEEEEEETTEEECCCCBCCBB-----------
T ss_pred CHH----HHHHHHHHHHhc-cCceEEEEEEEECCCCE---EEEEecCCceEEEEcCCcEEEecCCCCce-----------
Confidence 223 234455666654 45777776666543433 88999999999999999877665432211
Q ss_pred CCCcccCccccccccccccCCCEEeeecCC
Q 010270 459 GEPLKDGETRLCGLNLARMLGDKFLKQQDA 488 (514)
Q Consensus 459 gg~v~~g~~Rv~GL~vsRslGD~~lK~~dg 488 (514)
|. .... .+.-..+.-..||.++.++||
T Consensus 125 G~-~~~~--~~~~~~~~l~~gd~l~l~sDG 151 (193)
T 3zt9_A 125 GY-NYPH--QLLIAKGSYQEGDLFLIHSDG 151 (193)
T ss_dssp TT-BCCS--SCCCEEEECCTTCEEEEECTT
T ss_pred ec-cCCc--cceeEEeccCCCCEEEEECCC
Confidence 11 0000 111134556789999999998
No 61
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=96.35 E-value=0.1 Score=54.20 Aligned_cols=137 Identities=12% Similarity=-0.050 Sum_probs=79.7
Q ss_pred CCCceEEEEcCCCCCCCceEEEEecCCCchHHHHHHHHHHHHHHHHHHhhhhhhhhhcccccHHHHHHHHHHHHHHHhhh
Q 010270 318 PMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNH 397 (514)
Q Consensus 318 ~nED~~~v~~~~~~~~~~~lfgVfDGHGG~~aa~~as~~l~~~L~~~l~~~~~~e~~~~~~~i~~~L~~af~~~d~~i~~ 397 (514)
.--|.|.+... ++..+++|+|++|---.|..++..+...|........ ++.+ .+..+|..+..
T Consensus 51 vgGD~y~~~~~----~~~~~~~v~Dv~GhGv~AA~~~~~~~~~l~~~~~~~~---------~p~~----il~~ln~~~~~ 113 (399)
T 3ke6_A 51 AGGDWFDALAL----GDRLVLVVGDVVGHGVEAAAVMSQLRTALRMQISAGY---------TVVE----ALEAVDRFHKQ 113 (399)
T ss_dssp CCSEEEEEEEC----SSEEEEEEEECSSCSHHHHHHHHHHHHHHHHHHHTTC---------CHHH----HHHHHHHHGGG
T ss_pred CCCceEEEEEE----CCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCC---------CHHH----HHHHHHHHHHh
Confidence 34687776532 2378899999988444555555556555655433211 2232 33444443333
Q ss_pred ccC--CCceEEEEEEecCCCceEEEEEEeccceEEEEe-CCeEEEcCCCCCCCCHHHHHHHHHcCCCcccCccccccccc
Q 010270 398 HYE--GCTATVLLVWADGNANIFAQCANVGDSACVMNV-DGKQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCGLNL 474 (514)
Q Consensus 398 ~~~--G~TAtv~li~~~~~~~~~l~vANvGDSRa~L~r-~g~~~~LT~DH~~~~~~E~~RI~~agg~v~~g~~Rv~GL~v 474 (514)
... ++|++++.+...... +.++|+|....|+++ +|+...+..++.+. -|... .+.-..+
T Consensus 114 ~~~~~~~t~~~~~id~~~~~---l~~~~aGh~~~~l~~~~g~~~~l~~~~~~p-----------lG~~~----~~~~~~~ 175 (399)
T 3ke6_A 114 VPGSKSATMCVGSLDFTSGE---FQYCTAGHPPPLLVTADASARYVEPTGAGP-----------LGSGT----GFPVRSE 175 (399)
T ss_dssp STTCTTCEEEEEEEETTTCE---EEEEEESSCCCEEECTTSCEEECCCCSCCC-----------TTSSC----CCCCEEE
T ss_pred cCCCcEEEEEEEEEECCCCE---EEEECCCCChhEEEeCCCCEEEeecCCCcc-----------eECCC----CceeEEE
Confidence 333 444444444333333 889999999999998 77788887665321 11100 1111335
Q ss_pred cccCCCEEeeecCCC
Q 010270 475 ARMLGDKFLKQQDAR 489 (514)
Q Consensus 475 sRslGD~~lK~~dg~ 489 (514)
.-.-||..+.++||.
T Consensus 176 ~l~~Gd~l~l~TDGl 190 (399)
T 3ke6_A 176 VLNIGDAILFYTDGL 190 (399)
T ss_dssp ECCTTCEEEEECTTT
T ss_pred EECCCCEEEEECCCc
Confidence 567899999999983
No 62
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=87.58 E-value=8.8 Score=38.76 Aligned_cols=136 Identities=16% Similarity=0.090 Sum_probs=66.9
Q ss_pred CCceEEEEecCCC-chHHHHHHHHHHHHHHHHHHhhhhhhhhhcccccHHHHHHHHHHHHHHHhhhccCCCceEEEEEEe
Q 010270 333 DKFGLFGICDGHG-GSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHHYEGCTATVLLVWA 411 (514)
Q Consensus 333 ~~~~lfgVfDGHG-G~~aa~~as~~l~~~L~~~l~~~~~~e~~~~~~~i~~~L~~af~~~d~~i~~~~~G~TAtv~li~~ 411 (514)
+....++|+|+.| |-.+| ..+-.+...+...+...... ......++. ..+..+|..+.....+.-+|+++...
T Consensus 201 ~~~~~~~i~Dv~GhGv~aa-~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~----~~l~~ln~~l~~~~~~~~~t~~~~~~ 274 (394)
T 3eq2_A 201 ERRVAFYLADVSGHGASSA-FVTVLLKFMTTRLLYESRRN-GTLPEFKPS----EVLAHINRGLINTKLGKHVTMLGGVI 274 (394)
T ss_dssp TTEEEEEEEEESSCSTTTH-HHHHHHHHHHHHHHHHSCSS-CSSSSCCHH----HHHHHHHHHHHHTTCCCCEEEEEEEE
T ss_pred CCcEEEEEEECCCCChHHH-HHHHHHHHHHHHHHHhhhcc-CCcccCCHH----HHHHHHHHHHhccCcCcEEEEEEEEE
Confidence 3457788999766 43333 33333333333332221100 000001222 23344555555444444444444444
Q ss_pred cCCCceEEEEEEeccce-EEEEeCCeEEEcCCCCCCCCHHHHHHHHHcCCCcccCccccccccccccCCCEEeeecCCC
Q 010270 412 DGNANIFAQCANVGDSA-CVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCGLNLARMLGDKFLKQQDAR 489 (514)
Q Consensus 412 ~~~~~~~l~vANvGDSR-a~L~r~g~~~~LT~DH~~~~~~E~~RI~~agg~v~~g~~Rv~GL~vsRslGD~~lK~~dg~ 489 (514)
+.... .+.++|.|-.. .++.++|....+.....|- |...+. ...-..+.-..||..+..+||.
T Consensus 275 d~~~~-~l~~~~aGh~p~~~~~~~g~~~~l~~~~~pl------------G~~~~~--~~~~~~~~l~~gd~l~l~TDG~ 338 (394)
T 3eq2_A 275 DLEKN-SLTYSIGGHLPLPVLFVEGQAGYLEGRGLPV------------GLFDDA--TYDDRVMELPPSFSLSLFSDGI 338 (394)
T ss_dssp ETTTT-EEEEEECSSSCCCEEEETTEEEECCCC--CC------------SCCCCC----CCEEEECCSSCEEEECSSCC
T ss_pred ECCCC-EEEEEcCCCCCCcEEecCCceEecCCCCcee------------EecCCC--ceEEEEEEeCCCCEEEEECCCc
Confidence 42222 27899999854 6778899888876543332 111111 1111345567799999999983
No 63
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=53.10 E-value=33 Score=32.63 Aligned_cols=33 Identities=21% Similarity=0.344 Sum_probs=28.0
Q ss_pred cEEEcCCCCCCeEeCCcccccceeEEEEeCCcceEEE
Q 010270 203 PLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWEL 239 (514)
Q Consensus 203 ~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~l 239 (514)
.++||+...|+|.|++. ..|++|.+++. +.|.+
T Consensus 22 ~~tiG~~~~~~itl~~~---~~~i~l~~~~~-~~~~v 54 (238)
T 1wv3_A 22 TYTISEDERADITLKSL---GEVIHLEQNNQ-GTWQA 54 (238)
T ss_dssp CEEEESCTTSSEECTTC---CCCEEEEECTT-SCEEE
T ss_pred EEEECCCccceEEecCC---CccEEEEEccC-CeEEE
Confidence 79999999999999977 78899999764 35776
No 64
>1p9k_A ORF, hypothetical protein; alfal motif, RNA-binding protein, E.coli, montreal-kingston structural genomics initiative, BSGI; NMR {Escherichia coli} SCOP: d.66.1.6
Probab=30.66 E-value=34 Score=26.51 Aligned_cols=32 Identities=6% Similarity=0.114 Sum_probs=23.8
Q ss_pred CceeeCCeecCCCCCCCCCCCCcEEccCCCeeeeccceeEE
Q 010270 246 NGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIH 286 (514)
Q Consensus 246 NGT~vNg~~i~~p~~~~~~~g~~~~L~~GD~I~lG~~~~~~ 286 (514)
...+|||+.+..| ...+.+||.|++++..+.+
T Consensus 46 G~V~VNG~~v~~~---------~~~v~~gd~I~v~~~~~~~ 77 (79)
T 1p9k_A 46 GQVKVDGAVETRK---------RCKIVAGQTVSFAGHSVQV 77 (79)
T ss_dssp HHHEETTBCCCCS---------SCCCCSSEEEEETTEEEEE
T ss_pred CEEEECCEEecCC---------CCCCCCCCEEEECCEEEEE
Confidence 4578999988643 2568899999998876543
No 65
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=31.22 E-value=15 Score=25.19 Aligned_cols=20 Identities=35% Similarity=0.632 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHHhhccc
Q 010270 10 FTVLLMLILILLFIFIACKP 29 (514)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~ 29 (514)
++.++++.+|++++.+--||
T Consensus 17 l~vi~iisLIiLi~~w~qKP 36 (39)
T 2l6w_A 17 LVVLTIISLIILIMLWQKKP 36 (39)
Confidence 34444444444444444444
No 66
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=22.55 E-value=93 Score=22.86 Aligned_cols=13 Identities=15% Similarity=0.562 Sum_probs=5.1
Q ss_pred HHHHHHHHHHhhc
Q 010270 15 MLILILLFIFIAC 27 (514)
Q Consensus 15 ~~~~~~~~~~~~~ 27 (514)
.||++++++++-|
T Consensus 21 LLL~Lii~~LwK~ 33 (54)
T 2l8s_A 21 LLLMLLILALWKI 33 (54)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc
Confidence 3333344444433
No 67
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=21.12 E-value=85 Score=21.23 Aligned_cols=12 Identities=17% Similarity=0.354 Sum_probs=5.0
Q ss_pred HHHHHHHHhhcc
Q 010270 17 ILILLFIFIACK 28 (514)
Q Consensus 17 ~~~~~~~~~~~~ 28 (514)
+++.++++|.+|
T Consensus 25 ~li~~l~~~~~r 36 (38)
T 2k1k_A 25 ALLLGILVFRSR 36 (38)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHee
Confidence 334444444433
Done!