Query 010272
Match_columns 514
No_of_seqs 149 out of 1499
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 03:11:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010272.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010272hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyg_A T-complex protein 1 sub 100.0 8E-106 3E-110 854.5 57.3 480 1-483 35-528 (529)
2 3iyg_G T-complex protein 1 sub 100.0 1E-105 4E-110 850.8 56.9 481 1-483 34-514 (515)
3 1a6d_B Thermosome (beta subuni 100.0 6E-106 2E-110 858.1 51.4 482 1-487 46-527 (543)
4 3ko1_A Chaperonin; 9-fold symm 100.0 2E-106 8E-111 860.3 47.8 484 1-488 55-538 (553)
5 3ruv_A Chaperonin, CPN; double 100.0 3E-105 1E-109 851.5 53.5 480 1-488 44-524 (543)
6 1q3q_A Thermosome alpha subuni 100.0 3E-105 1E-109 852.8 52.3 482 1-487 48-529 (548)
7 3iyg_H T-complex protein 1 sub 100.0 4E-104 2E-108 837.7 55.6 473 1-483 36-514 (515)
8 3iyg_B T-complex protein 1 sub 100.0 6E-104 2E-108 837.1 56.5 472 1-484 35-512 (513)
9 1a6d_A Thermosome (alpha subun 100.0 1E-104 3E-109 848.0 49.3 479 1-486 47-525 (545)
10 3aq1_B Thermosome subunit; gro 100.0 2E-105 6E-110 846.6 42.8 480 4-487 1-480 (500)
11 3p9d_A T-complex protein 1 sub 100.0 1E-104 4E-109 849.3 48.7 484 1-487 49-552 (559)
12 3p9d_G T-complex protein 1 sub 100.0 3E-105 9E-110 852.4 41.6 483 1-492 49-536 (550)
13 3iyg_D T-complex protein 1 sub 100.0 2E-103 6E-108 834.4 54.4 475 1-482 36-517 (518)
14 3iyg_Z T-complex protein 1 sub 100.0 5E-103 2E-107 830.0 52.9 472 1-482 35-516 (517)
15 3iyg_E T-complex protein 1 sub 100.0 1E-102 4E-107 828.4 56.0 476 1-482 35-514 (515)
16 3p9d_C T-complex protein 1 sub 100.0 4E-104 1E-108 844.7 42.7 484 1-486 44-589 (590)
17 3p9d_D T-complex protein 1 sub 100.0 6E-104 2E-108 839.3 39.7 476 1-482 44-527 (528)
18 3p9d_E T-complex protein 1 sub 100.0 3E-102 1E-106 830.9 47.3 479 1-485 70-560 (562)
19 3p9d_H T-complex protein 1 sub 100.0 7E-104 2E-108 844.4 34.6 481 1-487 51-552 (568)
20 3iyg_Q T-complex protein 1 sub 100.0 1E-100 5E-105 812.2 55.7 471 1-482 36-511 (512)
21 3p9d_F T-complex protein 1 sub 100.0 3E-102 1E-106 830.1 37.4 480 1-487 42-541 (546)
22 3p9d_B T-complex protein 1 sub 100.0 2E-102 8E-107 828.6 34.5 475 1-487 42-522 (527)
23 1we3_A CPN60(groel); chaperoni 100.0 1.6E-88 5.3E-93 720.7 40.7 433 1-487 35-529 (543)
24 1kp8_A Groel protein; chaperon 100.0 2.3E-88 8E-93 718.1 38.1 431 1-487 35-527 (547)
25 1iok_A Chaperonin 60; chaperon 100.0 7.1E-89 2.4E-93 722.7 28.6 432 1-487 36-529 (545)
26 3rtk_A 60 kDa chaperonin 2; he 100.0 8.6E-88 2.9E-92 711.7 32.8 431 1-488 35-526 (546)
27 1gml_A T-complex protein 1 sub 100.0 5.3E-37 1.8E-41 279.8 18.9 174 165-339 1-174 (178)
28 1ass_A Thermosome; chaperonin, 100.0 3E-32 1E-36 243.4 13.4 154 171-326 1-154 (159)
29 3m6c_A 60 kDa chaperonin 1; ch 99.3 5E-12 1.7E-16 112.6 8.6 145 168-353 2-169 (194)
30 3osx_A 60 kDa chaperonin; alph 99.2 2.8E-11 9.6E-16 108.0 9.9 141 172-353 13-176 (201)
31 1srv_A Protein (groel (HSP60 c 99.2 1.6E-11 5.5E-16 104.2 6.5 113 173-310 1-135 (145)
32 1o13_A Probable NIFB protein; 62.9 19 0.00065 30.0 6.9 52 235-287 68-119 (136)
33 2yx6_A Hypothetical protein PH 59.9 22 0.00075 28.7 6.7 52 235-287 55-106 (121)
34 2wfb_A Putative uncharacterize 54.5 27 0.00091 28.2 6.3 51 235-286 59-110 (120)
35 1eo1_A Hypothetical protein MT 53.5 33 0.0011 27.8 6.8 52 235-287 57-108 (124)
36 2re2_A Uncharacterized protein 47.9 36 0.0012 28.2 6.2 51 235-287 71-121 (136)
37 1rdu_A Conserved hypothetical 39.1 34 0.0012 27.3 4.5 51 236-287 55-105 (116)
38 2qtd_A Uncharacterized protein 34.3 94 0.0032 24.1 6.4 48 237-286 50-97 (105)
39 3psh_A Protein HI_1472; substr 28.7 90 0.0031 29.6 6.5 50 237-286 78-153 (326)
40 2r79_A Periplasmic binding pro 24.8 1.6E+02 0.0056 27.1 7.3 50 237-286 53-110 (283)
41 2pw9_A Putative formate dehydr 24.8 70 0.0024 30.0 4.5 40 235-274 207-246 (268)
42 3v7q_A Probable ribosomal prot 24.7 1.7E+02 0.0059 22.5 6.2 51 234-287 26-80 (101)
43 2q8p_A Iron-regulated surface 23.6 73 0.0025 29.0 4.5 50 237-286 54-109 (260)
44 3md9_A Hemin-binding periplasm 23.3 1.5E+02 0.0051 26.8 6.6 50 237-286 53-110 (255)
45 2wi8_A Iron-uptake system-bind 23.2 1.4E+02 0.0049 28.0 6.7 50 237-286 90-143 (311)
46 1n2z_A Vitamin B12 transport p 22.8 1.1E+02 0.0037 27.6 5.5 34 237-270 51-85 (245)
47 4a18_G RPL30; ribosome, eukary 22.0 2.7E+02 0.0092 21.5 6.9 51 233-286 28-83 (104)
48 3on1_A BH2414 protein; structu 22.0 1.9E+02 0.0064 22.3 6.0 50 234-286 25-78 (101)
49 2lbw_A H/ACA ribonucleoprotein 21.6 2.6E+02 0.0089 22.4 6.9 49 234-285 27-80 (121)
50 3iot_A Maltose-binding protein 21.5 22 0.00075 35.8 0.4 18 460-477 358-375 (449)
51 2r7a_A Bacterial heme binding 20.9 1.6E+02 0.0054 26.6 6.3 50 237-286 53-111 (256)
52 2etv_A Iron(III) ABC transport 20.7 1.2E+02 0.0042 29.1 5.7 50 237-286 90-150 (346)
53 3iot_A Maltose-binding protein 20.7 22 0.00074 35.9 0.1 8 173-180 114-121 (449)
54 3ff4_A Uncharacterized protein 20.1 1.5E+02 0.0053 23.8 5.2 37 235-271 74-111 (122)
No 1
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=8.3e-106 Score=854.47 Aligned_cols=480 Identities=32% Similarity=0.483 Sum_probs=460.0
Q ss_pred CceeeecCCCCEEEecCHHHHhhcccccChHHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Q 010272 1 MLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRA 80 (514)
Q Consensus 1 ~~Kmi~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~gi~p~~I~~g 80 (514)
|||||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||+++|+++||+++.+++++|+||..|++|
T Consensus 35 ~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G 114 (529)
T 3iyg_A 35 LDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISG 114 (529)
T ss_pred CeEEEEcCCCCeEEeCCHHHHHHHcccCChHHHHHHHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhh-ccccCCCCcHHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCCcccCcccceeEEE
Q 010272 81 YNKALEDAVAVLDK-IAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEK 159 (514)
Q Consensus 81 ~~~a~~~~l~~L~~-~s~~v~~~~~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~~~~d~~~~I~i~~ 159 (514)
|++|++.++++|++ ++++++..+++.|.++++|+++||+.++++++|++++++|+..+++..++|..++|++ +|+|++
T Consensus 115 ~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~g~~~~dv~-~I~I~k 193 (529)
T 3iyg_A 115 YRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYPVN-SINVLK 193 (529)
T ss_pred HHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHhhhccCCCcccccc-eEEEEE
Confidence 99999999999998 9999887678999999999999999999999999999999999974323454567776 599999
Q ss_pred ecCCCCCCceeEeeEEEecccCCCCCCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHH
Q 010272 160 VPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQI 239 (514)
Q Consensus 160 i~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~~~~~~v~~i 239 (514)
+.|+++.||++++|++|++++.++ .||+.++||||++++++|++++++.+.++.+++++++..+.+.|+++++.++++|
T Consensus 194 ~~G~~~~ds~lv~G~v~dk~~~~~-~m~~~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI 272 (529)
T 3iyg_A 194 AHGRSQMESMLINGYALNCVVGSQ-GMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKI 272 (529)
T ss_pred ecCCCccceEEEeeeEEecCcccc-cCCcccCCceEEEecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCC------CCccCCccceEEEEEEC
Q 010272 240 LKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQ------ESDVGTGAGLFEVKKIG 313 (514)
Q Consensus 240 ~~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~------~~~lG~~~~~v~~~~ig 313 (514)
++.|+||||++++|++.+++||.++||++++++++++|+|||++|||++++++++++ +.++|+ |+.|+++++|
T Consensus 273 ~~~g~nvvi~~~~I~d~al~~L~~~gI~av~~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~-a~~v~~~~ig 351 (529)
T 3iyg_A 273 LATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQ-AEEVVQERIC 351 (529)
T ss_pred HhcCCCEEEECCCCCHHHHHHHHHcCCceeccCCHHHHHHHHHHhCCeeecchhcccchhccChhhCcc-ceEEEEEEeC
Confidence 999999999999999999999999999999999999999999999999999987765 567999 9999999999
Q ss_pred CeEEEEEEcCCCCCeeEEEEccCCHhHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhccCCCCcchHH
Q 010272 314 DEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWP 393 (514)
Q Consensus 314 ~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~ 393 (514)
+++|++|++|++++.|||+|||+|+.+++|.||+++||++++|+++++|++|||||++|++++.+|++++.+.++++|++
T Consensus 352 ~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~ 431 (529)
T 3iyg_A 352 DDELILIKNTKARTSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLA 431 (529)
T ss_pred CceEEEEEcCCCCceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhHHHHHHhcCCCHHHHHHHHHHHHhCCC-------CceEEEeCCCCccccccccccccchHHHHHHHHHH
Q 010272 394 YEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGE-------NAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTA 466 (514)
Q Consensus 394 ~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~-------~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A 466 (514)
+++||+||+.||++||+|||+|+.+++.+|++.|..+. ..++|||+.+|++.||++.|||||+.||+++|++|
T Consensus 432 i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~d~~~~gV~dp~~vk~~al~~A 511 (529)
T 3iyg_A 432 IAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFA 511 (529)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCceeeeeCCCCCccChhhccCEecHHHHHHHHHHH
Confidence 99999999999999999999999999999999997653 15799999999999999999999999999999999
Q ss_pred HHHHHHHhchhhhhcCC
Q 010272 467 IEAACMLLRIDDIVSGI 483 (514)
Q Consensus 467 ~e~a~~iL~id~ii~~~ 483 (514)
+|+|++|||||++|...
T Consensus 512 ~e~a~~iL~iD~ii~~~ 528 (529)
T 3iyg_A 512 TEAAITILRIDDLIKLH 528 (529)
T ss_pred HHHHHHHHhHHhhhcCC
Confidence 99999999999999764
No 2
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.1e-105 Score=850.82 Aligned_cols=481 Identities=63% Similarity=1.027 Sum_probs=462.8
Q ss_pred CceeeecCCCCEEEecCHHHHhhcccccChHHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Q 010272 1 MLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRA 80 (514)
Q Consensus 1 ~~Kmi~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~gi~p~~I~~g 80 (514)
|||||+++.|+++|||||+|||++|+++||+|||++++|++||+++||||||+|+|+++||+++.+++++|+||..|++|
T Consensus 34 ~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G 113 (515)
T 3iyg_G 34 MMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISA 113 (515)
T ss_pred CeEEEECCCCCeEEECCHHHHHHhcccCCHHHHHHHHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCCcccCcccceeEEEe
Q 010272 81 YNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKV 160 (514)
Q Consensus 81 ~~~a~~~~l~~L~~~s~~v~~~~~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~~~~d~~~~I~i~~i 160 (514)
|++|++.++++|+++++|++..+++.|.++++|+++||+.++|.+++++++++|+..+.++. ++..++|++++|+|+++
T Consensus 114 ~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i~vdav~~V~~~~-~~~~~~dl~~~I~I~ki 192 (515)
T 3iyg_G 114 YRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEE-NGRKEIDIKKYARVEKI 192 (515)
T ss_pred HHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHhccccc-CCCcccchhheeEEEEe
Confidence 99999999999999999998777899999999999999999999999999999999987422 33445788777999999
Q ss_pred cCCCCCCceeEeeEEEecccCCCCCCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHH
Q 010272 161 PGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQIL 240 (514)
Q Consensus 161 ~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~~~~~~v~~i~ 240 (514)
+|++++||++++|++|++++.++ .|+++++||||++++++|++++++.++++.+++++++.++++.|++++++++++|+
T Consensus 193 ~Ggs~~ds~lv~G~v~dk~~~~~-~m~~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~ 271 (515)
T 3iyg_G 193 PGGIIEDSCVLRGVMINKDVTHP-RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDII 271 (515)
T ss_pred cCCCcccceEEeeEEEeCCCCCC-CCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998 89999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEE
Q 010272 241 KFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFI 320 (514)
Q Consensus 241 ~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l 320 (514)
+.|++||+++++|++.+++||.++||++++++++++|+|||++|||+++++++++++.++|+.|+.|++.++|+++|.+|
T Consensus 272 ~~g~~vIi~~~~I~~~al~~L~~~~I~av~~~~k~~leria~~tGa~ii~~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i 351 (515)
T 3iyg_G 272 QLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREEDVGTGAGLLEIKKIGDEYFTFI 351 (515)
T ss_pred hCCCCEEEECCccCHHHHHHHHHCCceeeccCCHHHHHHHHHHhCCeeeccccccChhhcCCcccEEEEEEECCceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999997799999999999999999
Q ss_pred EcCCCCCeeEEEEccCCHhHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhccCCCCcchHHHHHHHHh
Q 010272 321 VDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIA 400 (514)
Q Consensus 321 ~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~a 400 (514)
++|++++.|||+|||+|+.+++|.||+++||++++|++++++++|||||++|++++.+|++++.+.++++|+++++|++|
T Consensus 352 ~g~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~A 431 (515)
T 3iyg_G 352 TECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQA 431 (515)
T ss_pred eCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999889999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHhcCCCHHHHHHHHHHHHhCCCCceEEEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHhchhhhh
Q 010272 401 FEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 480 (514)
Q Consensus 401 L~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii 480 (514)
|+.||++||+|||+|+.+++.+|++.|..+.++++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|
T Consensus 432 le~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~al~~A~e~a~~iL~iD~ii 511 (515)
T 3iyg_G 432 LEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIV 511 (515)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCcccccHHcCCEEcHHHHHHHHHHHHHHHHHHHHHHhee
Confidence 99999999999999999999999999976544689999999999999999999999999999999999999999999999
Q ss_pred cCC
Q 010272 481 SGI 483 (514)
Q Consensus 481 ~~~ 483 (514)
...
T Consensus 512 ~~~ 514 (515)
T 3iyg_G 512 SGH 514 (515)
T ss_pred ecC
Confidence 753
No 3
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=6e-106 Score=858.09 Aligned_cols=482 Identities=38% Similarity=0.626 Sum_probs=461.4
Q ss_pred CceeeecCCCCEEEecCHHHHhhcccccChHHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Q 010272 1 MLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRA 80 (514)
Q Consensus 1 ~~Kmi~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~gi~p~~I~~g 80 (514)
|||||+++.|+++|||||+|||++|+++||+|||++++|++|++++||||||+++|+++||+++.+++++|+||..|++|
T Consensus 46 ~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G 125 (543)
T 1a6d_B 46 MDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEG 125 (543)
T ss_dssp CCEEEECTTCCEEEECCHHHHHHHSCCCSHHHHHHHHHHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred CeEEEEcCCCCeEEeCCHHHHHHHhhccchHHHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCCcccCcccceeEEEe
Q 010272 81 YNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKV 160 (514)
Q Consensus 81 ~~~a~~~~l~~L~~~s~~v~~~~~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~~~~d~~~~I~i~~i 160 (514)
|++|++.++++|++++++++..+++.|.++++|+|+||++++|+++|++++++|+..++++. +|..++|++ +|+|+++
T Consensus 126 ~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~-~g~~~~d~~-~I~V~k~ 203 (543)
T 1a6d_B 126 YRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELR-DGKYYVDFD-NIQVVKK 203 (543)
T ss_dssp HHHHHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEEC-SSSEEECGG-GEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhcccc-cCCcccccc-eEEEEEe
Confidence 99999999999999999998767899999999999999999999999999999999998631 244567874 7999999
Q ss_pred cCCCCCCceeEeeEEEecccCCCCCCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHH
Q 010272 161 PGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQIL 240 (514)
Q Consensus 161 ~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~~~~~~v~~i~ 240 (514)
+|++++||++++|++|++++.++ .|+++++||||++++++|++++++.+.++.+++.+++..+++.|+++++.++++|+
T Consensus 204 ~G~~~~ds~lv~G~v~dk~~~~~-~m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~ 282 (543)
T 1a6d_B 204 QGGAIDDTQLINGIIVDKEKVHP-GMPDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIK 282 (543)
T ss_dssp ESSCGGGCEEESEEEESCCCSST-TSCSEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCccceeEEccEEEecCCCCC-CCcceecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998 89999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEE
Q 010272 241 KFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFI 320 (514)
Q Consensus 241 ~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l 320 (514)
+.|++|||++++|++.+++||.++||++++++++++|+|||++|||+++++++++++.++|+ |+.|+++++|+++|++|
T Consensus 283 ~~g~~lvi~~~~I~~~al~~L~~~~I~av~~v~k~~le~ia~~tGa~iis~l~~l~~~~LG~-a~~v~~~~ig~~~~~~~ 361 (543)
T 1a6d_B 283 SVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKKSDMDKLAKATGASIVSTIDEISSSDLGT-AERVEQVKVGEDYMTFV 361 (543)
T ss_dssp HTTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCEESCGGGCCGGGCEE-EEEEEEEEETTEEEEEE
T ss_pred HcCCCEEEECCCcCHHHHHHHHHCCeeEeccCCHHHHHHHHHHhCCceecccccCCHHHCCC-ceEEEEEEecCceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred EcCCCCCeeEEEEccCCHhHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhccCCCCcchHHHHHHHHh
Q 010272 321 VDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIA 400 (514)
Q Consensus 321 ~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~a 400 (514)
++|.+++.|||+|||+|+.+++|.||+++||++++|+++++|++|||||++|++++.+|++++.+.++++|+++++|++|
T Consensus 362 ~g~~~~~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~A 441 (543)
T 1a6d_B 362 TGCKNPKAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADA 441 (543)
T ss_dssp EEESSSSCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHH
T ss_pred ecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhcCChHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988899999999999999
Q ss_pred hhhhHHHHHHhcCCCHHHHHHHHHHHHhCCCCceEEEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHhchhhhh
Q 010272 401 FEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 480 (514)
Q Consensus 401 L~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii 480 (514)
|+.||++||+|||+|+.+++.+|+..|..+. .++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||+|++|
T Consensus 442 Le~ip~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI 520 (543)
T 1a6d_B 442 IEEIPRALAENAGLDPIDILLKLRAEHAKGN-KTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDVI 520 (543)
T ss_dssp HTHHHHHHHHHHTCCHHHHHHHHHHHHHTTC-TTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHcCCChHHHHHHHHHHHhCCC-CCeeEeCCCCcccchhhcCceecHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999997664 689999999999999999999999999999999999999999999999
Q ss_pred cCCccCC
Q 010272 481 SGIKKKQ 487 (514)
Q Consensus 481 ~~~~~~~ 487 (514)
...|.++
T Consensus 521 ~~~~~~~ 527 (543)
T 1a6d_B 521 ATKSSSS 527 (543)
T ss_dssp C------
T ss_pred hcCccCC
Confidence 8877544
No 4
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=2.2e-106 Score=860.27 Aligned_cols=484 Identities=34% Similarity=0.578 Sum_probs=462.2
Q ss_pred CceeeecCCCCEEEecCHHHHhhcccccChHHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Q 010272 1 MLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRA 80 (514)
Q Consensus 1 ~~Kmi~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~gi~p~~I~~g 80 (514)
|||||+++.|+++|||||+|||++|+++||+|||++++|++|++++||||||+++|+++||+++.+++++|+||..|++|
T Consensus 55 ~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G 134 (553)
T 3ko1_A 55 MDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISG 134 (553)
T ss_dssp CEEEEECTTSCEEEECCHHHHHHSSCCCSHHHHHHHHHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred hhhHHHhhccceEEecCccchhhhhhccChhHHHHHHHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCCcccCcccceeEEEe
Q 010272 81 YNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKV 160 (514)
Q Consensus 81 ~~~a~~~~l~~L~~~s~~v~~~~~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~~~~d~~~~I~i~~i 160 (514)
|++|++.++++|++++++++..+++.|.++++|+++||+.+.++++|++++++|+..++.+. +|...+|++ +|+|+++
T Consensus 135 ~~~A~~~a~~~L~~~s~~v~~~d~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~-~G~~~~dl~-~I~I~k~ 212 (553)
T 3ko1_A 135 YKKAEEVALQTIQELAQTVSINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELR-GDKWYVDLD-NIQIVKK 212 (553)
T ss_dssp HHHHHHHHHHHHHTTCEECCTTCHHHHHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCT-TSSCCCCGG-GEEEEEC
T ss_pred hhHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhc-CCceEEech-hHHHHHH
Confidence 99999999999999999998778999999999999999999999999999999999998631 355568886 5999999
Q ss_pred cCCCCCCceeEeeEEEecccCCCCCCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHH
Q 010272 161 PGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQIL 240 (514)
Q Consensus 161 ~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~~~~~~v~~i~ 240 (514)
.|++..+|++++|++|++++.++ .|+++++||||++++++|++.+++.++++.+++++++.++++.|+++++.++++|+
T Consensus 213 ~Gg~~~ds~lv~G~v~dk~~~~~-~m~~~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~ 291 (553)
T 3ko1_A 213 AGGSINDTQLVYGIVVDKEVVHP-GMPKRLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKIL 291 (553)
T ss_dssp CCSCGGGCEEESEEEECSCBSCT-TSCSCCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCccccceeeEEEEecccccCC-CCccccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998 89999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEE
Q 010272 241 KFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFI 320 (514)
Q Consensus 241 ~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l 320 (514)
+.|+||||++++|++.+++||.++||++++++++.+|+|||++|||+++++++++++.++|+ |+.|+++++|+++|++|
T Consensus 292 ~~g~~vvI~~~~I~~~al~~L~~~gI~~v~~v~k~~leria~~tGa~ivs~l~~l~~~~LG~-a~~v~~~~ig~d~~~~i 370 (553)
T 3ko1_A 292 ATGANVIICQKGIDEVAQSYLAKKGVLAVRRAKKSDLEKLARATGGRVVSNIDEISEQDLGY-ASLIEERKVGEDKMVFV 370 (553)
T ss_dssp TTCCSEEECSSCBCSHHHHHHHHHTCEEECCCCHHHHHHHHTTTTCCEESCGGGCCSSSSEE-CSEEECCCCSSSCCEEE
T ss_pred hhcceEEEeccChHHHHHHHHHhcchhhhhhhhhhhHHHHHHhhCCeeecccccCChhhcch-HHHHHHhhcCcceEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred EcCCCCCeeEEEEccCCHhHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhccCCCCcchHHHHHHHHh
Q 010272 321 VDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIA 400 (514)
Q Consensus 321 ~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~a 400 (514)
++|.++..|||+|||+|+.+++|.||+++||++++|+++++|++|||||++|++++.+|++++.+.++++|+++++|++|
T Consensus 371 ~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~A 450 (553)
T 3ko1_A 371 EGAKNPKSISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVEAYANA 450 (553)
T ss_dssp ESCSSSSCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHH
T ss_pred ccCCCCceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHHHHHhccccCChhHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988899999999999999
Q ss_pred hhhhHHHHHHhcCCCHHHHHHHHHHHHhCCCCceEEEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHhchhhhh
Q 010272 401 FEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 480 (514)
Q Consensus 401 L~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii 480 (514)
|+.||++||+|||+|+.+++.+|+..|..++++++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|
T Consensus 451 Le~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii 530 (553)
T 3ko1_A 451 LESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQPVDMWQKGVIEPALVKMNAIKAATEAATLVLRIDDVV 530 (553)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTTTEEEESGGGSCEEETTHHHHHHHHHHHHHHHHHHEEEEC
T ss_pred HHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEeecCCchHHHHhCccchhhhhhhhhhhcchhheEEEehHHHH
Confidence 99999999999999999999999998876533679999999999999999999999999999999999999999999999
Q ss_pred cCCccCCC
Q 010272 481 SGIKKKQA 488 (514)
Q Consensus 481 ~~~~~~~~ 488 (514)
...|.+++
T Consensus 531 ~~~~~~~~ 538 (553)
T 3ko1_A 531 SAGKKSGG 538 (553)
T ss_dssp CC------
T ss_pred HhhhhccC
Confidence 88776654
No 5
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=3.2e-105 Score=851.52 Aligned_cols=480 Identities=37% Similarity=0.633 Sum_probs=461.2
Q ss_pred CceeeecCCCCEEEecCHHHHhhcccccChHHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Q 010272 1 MLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRA 80 (514)
Q Consensus 1 ~~Kmi~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~gi~p~~I~~g 80 (514)
|||||+++.|+++|||||+|||++|+++||+|||++++|++|++++||||||+++|+++||+++.+++++|+||..|++|
T Consensus 44 ~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G 123 (543)
T 3ruv_A 44 MDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKG 123 (543)
T ss_dssp CEEEEECTTSCEEEECCHHHHHHHSCCCCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred CeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCCcccCcccceeEEEe
Q 010272 81 YNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKV 160 (514)
Q Consensus 81 ~~~a~~~~l~~L~~~s~~v~~~~~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~~~~d~~~~I~i~~i 160 (514)
|++|++.++++|++++++++..+++.|.++++|+++||+.+.++++|++++++|+..++.+ +|. +|++ +|+|+++
T Consensus 124 ~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~--~g~--~dl~-~I~V~k~ 198 (543)
T 3ruv_A 124 YQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDD--EGK--VDKD-LIKIEKK 198 (543)
T ss_dssp HHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCT--TSC--CCGG-GEEEEEE
T ss_pred HHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhcc--CCC--cccc-eEEEEEc
Confidence 9999999999999999999877899999999999999999999999999999999999863 243 7775 5999999
Q ss_pred cCCCCCCceeEeeEEEecccCCCCCCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHH
Q 010272 161 PGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQIL 240 (514)
Q Consensus 161 ~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~~~~~~v~~i~ 240 (514)
.|++..+|++++|++|++++.++ .|+++++||||++++++|++.+++.++++.+++.+++.++++.|+++++.++++|+
T Consensus 199 ~Gg~~~ds~lv~G~v~dk~~~~~-~m~~~~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~ 277 (543)
T 3ruv_A 199 SGASIDDTELIKGVLVDKERVSA-QMPKKVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIK 277 (543)
T ss_dssp ECSCGGGCEEESSEEESCCCSCT-TSCSEEEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccceeecceEEeccccCc-cccccccCcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998 89999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEE
Q 010272 241 KFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFI 320 (514)
Q Consensus 241 ~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l 320 (514)
+.|+||||++++|++.+++||.++||++++++++++|+|||++|||+++++++++++.++|+ |+.|+++++|+++|++|
T Consensus 278 ~~g~~vvi~~~~I~~~al~~L~~~gI~~v~~v~k~~le~ia~~tGa~iis~l~~l~~~~LG~-a~~v~~~~ig~~~~~~i 356 (543)
T 3ruv_A 278 ASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKATGANVIAAIAALSAQDLGD-AGLVEERKISGDSMIFV 356 (543)
T ss_dssp HHTCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCEESCGGGCCGGGCEE-EEEEEEEEETTEEEEEE
T ss_pred HcCCCEEEEeCCccHHHHHHHHHcCcEEEeeCCHHHHHHHHHHhCCceecccccCCHHHCCc-ccEEEEEEeCCceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred EcCCCCCeeEEEEccCCHhHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhccCCCCcchHHHHHHHHh
Q 010272 321 VDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIA 400 (514)
Q Consensus 321 ~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~a 400 (514)
++|.++..|||+|||+|+.+++|.||+++||++++|+++++|++|||||++|++++.+|++++.+.++++|+++++|++|
T Consensus 357 ~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~A 436 (543)
T 3ruv_A 357 EECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADA 436 (543)
T ss_dssp ECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHH
T ss_pred ECCCCCceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988999999999999999
Q ss_pred hhhhHHHHHHhcCCCHHHHHHHHHHHHh-CCCCceEEEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHhchhhh
Q 010272 401 FEAIPRTLAQNCGINVIRTMTALQGKHA-NGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDI 479 (514)
Q Consensus 401 L~~ip~~L~~NaG~~~~~~~~~l~~~~~-~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~i 479 (514)
|+.||++||+|||+|+.+++.+|+..|. .++ +++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++
T Consensus 437 Le~ip~~La~NaG~d~~~~v~~l~~~h~~~~~-~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~i 515 (543)
T 3ruv_A 437 LEVIPRTLAENAGLDAIEILVKVRAAHASNGN-KCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDV 515 (543)
T ss_dssp HTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCC-TTEEECTTTCSEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCC-ceeeeeCCCCccccHHHcCCEecHHHHHHHHHHHHHHHHHHHhHHhh
Confidence 9999999999999999999999999986 554 78999999999999999999999999999999999999999999999
Q ss_pred hcCCccCCC
Q 010272 480 VSGIKKKQA 488 (514)
Q Consensus 480 i~~~~~~~~ 488 (514)
|...|.+++
T Consensus 516 i~~~~~~~~ 524 (543)
T 3ruv_A 516 IAAEKLRGA 524 (543)
T ss_dssp EEEC-----
T ss_pred eecCccCCC
Confidence 998777653
No 6
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=2.9e-105 Score=852.78 Aligned_cols=482 Identities=38% Similarity=0.641 Sum_probs=462.8
Q ss_pred CceeeecCCCCEEEecCHHHHhhcccccChHHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Q 010272 1 MLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRA 80 (514)
Q Consensus 1 ~~Kmi~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~gi~p~~I~~g 80 (514)
|||||+++.|+++|||||+|||++|+++||+|||++++|++|++++||||||+++|+++||+++.+++++|+||..|++|
T Consensus 48 ~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G 127 (548)
T 1q3q_A 48 MDKMLVDSLGDIVVTNDCATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKG 127 (548)
T ss_dssp CEEEEECTTCCEEEESCHHHHHHHSCCCSHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred ceEEEEcCCCCeEEECCHHHHHHHhhccchHHHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCCcccCcccceeEEEe
Q 010272 81 YNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKV 160 (514)
Q Consensus 81 ~~~a~~~~l~~L~~~s~~v~~~~~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~~~~d~~~~I~i~~i 160 (514)
|++|++.++++|++++++++..+++.|.++++|+|+||++++|+++|++++++|+..++++. .|..++|++ +|+|+++
T Consensus 128 ~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~V~~~~-~g~~~~d~~-~I~V~k~ 205 (548)
T 1q3q_A 128 YALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKK-DGKYVVDLD-NIKFEKK 205 (548)
T ss_dssp HHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEES-SSSEECCGG-GEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHhcccc-CCCccccCC-eEEEEEe
Confidence 99999999999999999998767999999999999999999999999999999999998631 144567874 6999999
Q ss_pred cCCCCCCceeEeeEEEecccCCCCCCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHH
Q 010272 161 PGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQIL 240 (514)
Q Consensus 161 ~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~~~~~~v~~i~ 240 (514)
+|++++||++++|++|++++.++ .|+++++||||++++++|++++++.+.++.+++.+++..++++|+++++.++++|+
T Consensus 206 ~G~~~~ds~lv~G~v~dk~~~~~-~m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~ 284 (548)
T 1q3q_A 206 AGEGVEESELVRGVVIDKEVVHP-RMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIA 284 (548)
T ss_dssp EBSCGGGCEEESSEEESCCCSST-TSCSEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCccceEEEeeEEEeccCCCC-CCcceecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998 89999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEE
Q 010272 241 KFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFI 320 (514)
Q Consensus 241 ~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l 320 (514)
+.|++|||++++|++.+++||.++||++++++++++|+|||++|||++++++++++++++|+ |+.|+++++|+++|++|
T Consensus 285 ~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~ii~~l~~~~~~~LG~-a~~v~~~~ig~~~~~~~ 363 (548)
T 1q3q_A 285 QTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGY-AEVVEERKLAGENMIFV 363 (548)
T ss_dssp HHTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSSGGGCCGGGCEE-ESEEEEEEETTEEEEEE
T ss_pred HhCcCEEEEcCCcCHHHHHHHHHCCcEEEccCCHHHHHHHHHHhCCeEecccccCCHHHCCC-ceEEEEEEecCceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred EcCCCCCeeEEEEccCCHhHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhccCCCCcchHHHHHHHHh
Q 010272 321 VDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIA 400 (514)
Q Consensus 321 ~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~a 400 (514)
++|.+++.|||+|||+|+.+++|.||+++||++++|+++++|++|||||++|++++.+|++++.+.++++|+++++|++|
T Consensus 364 ~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~A 443 (548)
T 1q3q_A 364 EGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADA 443 (548)
T ss_dssp ECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred ecCCCCCeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999888888999999999999
Q ss_pred hhhhHHHHHHhcCCCHHHHHHHHHHHHhCCCCceEEEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHhchhhhh
Q 010272 401 FEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 480 (514)
Q Consensus 401 L~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii 480 (514)
|+.||++||+|||+|+.+++.+|+..|.+++ .++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|
T Consensus 444 Le~ip~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI 522 (548)
T 1q3q_A 444 LKIIPKTLAENAGLDTVEMLVKVISEHKNRG-LGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVI 522 (548)
T ss_dssp TTHHHHHHHHHTTCCHHHHHHHHHHHHHHHC-TTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHhhcCC-CCcceeCCCCCccchhhcCCEecHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999886543 679999999999999999999999999999999999999999999999
Q ss_pred cCCccCC
Q 010272 481 SGIKKKQ 487 (514)
Q Consensus 481 ~~~~~~~ 487 (514)
...|.++
T Consensus 523 ~~~~~~~ 529 (548)
T 1q3q_A 523 AAKATKP 529 (548)
T ss_dssp ECCC---
T ss_pred hcCCcCC
Confidence 9877654
No 7
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.5e-104 Score=837.71 Aligned_cols=473 Identities=33% Similarity=0.571 Sum_probs=454.9
Q ss_pred CceeeecCCCCEEEecCHHHHhhcccccChHHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Q 010272 1 MLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRA 80 (514)
Q Consensus 1 ~~Kmi~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~gi~p~~I~~g 80 (514)
|||||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||+++|+++||+++.+++++|+||..|++|
T Consensus 36 ~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G 115 (515)
T 3iyg_H 36 MDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRA 115 (515)
T ss_pred CeEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHHHHHHhhceeCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccCCCCc----HHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCCcccCccccee
Q 010272 81 YNKALEDAVAVLDKIAMPIDTND----RATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIK 156 (514)
Q Consensus 81 ~~~a~~~~l~~L~~~s~~v~~~~----~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~~~~d~~~~I~ 156 (514)
|++|++.++++|+++++|++..+ ++.|.++++|+++||+.+.++++|++++++|+..++. ++|+. +|+
T Consensus 116 ~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~i~~livdAv~~V~~-------~~d~~-~I~ 187 (515)
T 3iyg_H 116 FRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDD-------LLQLK-MIG 187 (515)
T ss_pred HHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHhcc-------cCCcc-eEE
Confidence 99999999999999999986444 6788999999999999999999999999999999963 34553 599
Q ss_pred EEEecCCCCCCceeEeeEEEecccCCCC--CCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHHHHHH
Q 010272 157 VEKVPGGQLEDSRVLKGVMFNKDVVAPG--KMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIEN 234 (514)
Q Consensus 157 i~~i~G~~~~ds~li~Giv~~~~~~~~~--~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~~~~~ 234 (514)
|+++.|+...||++++|++|++++.||+ +||++++||||++++++|++++++.++++.+++++++.++++.|+++++.
T Consensus 188 V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~~~~p~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~ 267 (515)
T 3iyg_H 188 IKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYD 267 (515)
T ss_pred EEecCCCCccceEEEeeeEEecCccCcccccCCccccccEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999983 35889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECC
Q 010272 235 LCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGD 314 (514)
Q Consensus 235 ~v~~i~~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~~v~~~~ig~ 314 (514)
++++|++.|++||+++++|++.+++||.++||++++++++.+|+|||++|||+++++++++++.++|+ |+.|++.++|+
T Consensus 268 ~le~I~~~g~~vvi~~~~I~dla~~~l~~~gI~~v~~~~k~~leria~~tGa~ii~~l~~~~~~~LG~-a~~v~~~~ig~ 346 (515)
T 3iyg_H 268 KLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSSDVLGR-CQVFEETQIGG 346 (515)
T ss_pred HHHHHHhcCCcEEEECCcccHHHHHHHHHcCCcccccccHHHHHHHHHHhCCEEeeccccCCHHHCCc-ccEEEEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred eEEEEEEcCCCCCeeEEEEccCCHhHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhccCCCCcchHHH
Q 010272 315 EFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPY 394 (514)
Q Consensus 315 ~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~ 394 (514)
++|++|++|.+++.|||+|||+|+.+++|.||+++||++++|++++++++|||||++|++++.+|++++.+.++++|+++
T Consensus 347 ~~~~~i~g~~~~~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i 426 (515)
T 3iyg_H 347 ERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLI 426 (515)
T ss_pred eEEEEEecCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChHHHHHH
Confidence 99999999999999999999999999999999999999999999999889999999999999999999998999999999
Q ss_pred HHHHHhhhhhHHHHHHhcCCCHHHHHHHHHHHHhCCCCceEEEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHh
Q 010272 395 EAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLL 474 (514)
Q Consensus 395 ~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL 474 (514)
++|++||+.||++||+|||+|+.+++.+|+..|..++ +++|||+.+|++.||++.|||||+.||+++|++|+|+|++||
T Consensus 427 ~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL 505 (515)
T 3iyg_H 427 GAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGG-MWYGVDINTEDIADNFEAFVWEPAMVRINALTAASEAACLIV 505 (515)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccC-CCeeEeCCCCcccccHhccCEECHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999997765 689999999999999999999999999999999999999999
Q ss_pred chhhhhcCC
Q 010272 475 RIDDIVSGI 483 (514)
Q Consensus 475 ~id~ii~~~ 483 (514)
|||++|..+
T Consensus 506 ~iD~ii~~~ 514 (515)
T 3iyg_H 506 SVDETIKNP 514 (515)
T ss_pred HHHHHhcCC
Confidence 999999753
No 8
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=6.4e-104 Score=837.07 Aligned_cols=472 Identities=29% Similarity=0.451 Sum_probs=455.7
Q ss_pred CceeeecCC--CCEEEecCHHHHhhcccccChHHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHH
Q 010272 1 MLKMLLDAS--GGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVIC 78 (514)
Q Consensus 1 ~~Kmi~~~~--g~~~iTnDG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~gi~p~~I~ 78 (514)
|||||+++. |+++|||||+|||++|+++||+|||++++|++||+++||||||+++|+++||+++.+++++|+||..|+
T Consensus 35 ~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~ 114 (513)
T 3iyg_B 35 MDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTII 114 (513)
T ss_pred CeEEeecCCCCCCeEEECCHHHHHHHccccCHHHHHHHHHHHHhhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHH
Confidence 899999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccCCCC---cHHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCCcccCcccce
Q 010272 79 RAYNKALEDAVAVLDKIAMPIDTN---DRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYI 155 (514)
Q Consensus 79 ~g~~~a~~~~l~~L~~~s~~v~~~---~~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~~~~d~~~~I 155 (514)
+||++|++.++++|+++++|++.+ +++.|.++++|+++||+.++++++|++++++|+..++++ +|+. +|
T Consensus 115 ~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~~~~~i~~livdAv~~V~~~-------~d~~-~I 186 (513)
T 3iyg_B 115 AGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGS-------GNLE-AI 186 (513)
T ss_pred HHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHhccc-------CCcC-eE
Confidence 999999999999999999998732 578999999999999999999999999999999999742 4543 59
Q ss_pred eEEEecCCCCCCceeEeeEEEecccCCCCCCcccccCCeEEEEeccCcccccc-ccceEEecCHHHHHHHHHHHHHHHHH
Q 010272 156 KVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGE-NQTNAELVKEEDWEVLLKMEEEYIEN 234 (514)
Q Consensus 156 ~i~~i~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~~~-~~~~~~i~~~~~l~~~~~~E~~~~~~ 234 (514)
+|+++.|++..||++++|++|++++.++ |+++++||||++++++|++++++ .+.++.+++++++.++.+.|++++++
T Consensus 187 ~V~ki~gg~~~ds~lv~G~v~dk~~~~~--m~~~~en~kIll~~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~ 264 (513)
T 3iyg_B 187 HVIKKLGGSLADSYLDEGFLLDKKIGVN--QPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKE 264 (513)
T ss_pred EEEEeCCCCccceeEEeeEEEeccccCC--CceeecCceEEEEcCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999986 99999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECC
Q 010272 235 LCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGD 314 (514)
Q Consensus 235 ~v~~i~~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~~v~~~~ig~ 314 (514)
++++|++.|+||||++++|++.+++||.++||++++++++.+|+|||++|||+++++++++++.++|+ |+.|+++.+|+
T Consensus 265 ~le~I~~~g~~vvi~~~~I~~~al~~L~~~~I~av~~~~~~~le~ia~~tGa~ii~~l~~l~~~~LG~-a~~v~~~~ig~ 343 (513)
T 3iyg_B 265 KVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLALVTGGEIASTFDHPELVKLGS-CKLIEEVMIGE 343 (513)
T ss_pred HHHHHHhcCCCEEEEcCCccHHHHHHHHHcCceEEecCCHHHHHHHHHHhCCEEecccccCCHhHCCc-ccEEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred eEEEEEEcCCCCCeeEEEEccCCHhHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhccCCCCcchHHH
Q 010272 315 EFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPY 394 (514)
Q Consensus 315 ~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~ 394 (514)
++|++|++|+++++|||+|||+|+.+++|.||+++||++++|++++++++|||||++|++++.+|++++.+.++++|+++
T Consensus 344 ~~~~~~~g~~~~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i 423 (513)
T 3iyg_B 344 DKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGKEAVAM 423 (513)
T ss_pred eEEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999889999999999999999999988899999999
Q ss_pred HHHHHhhhhhHHHHHHhcCCCHHHHHHHHHHHHhCCCCceEEEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHh
Q 010272 395 EAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLL 474 (514)
Q Consensus 395 ~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL 474 (514)
++|++||+.||++||+|||+|+.+++.+|++.|..++ +++|||+.+|++.||++.|||||+.||+++|++|+|+|++||
T Consensus 424 ~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL 502 (513)
T 3iyg_B 424 ESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGK-TTAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAAEAAEVIL 502 (513)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCC-CceeecCCCCCccchHhccCEecHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998775 789999999999999999999999999999999999999999
Q ss_pred chhhhhcCCc
Q 010272 475 RIDDIVSGIK 484 (514)
Q Consensus 475 ~id~ii~~~~ 484 (514)
|||++|...|
T Consensus 503 ~id~ii~~~~ 512 (513)
T 3iyg_B 503 RVDNIIKAAP 512 (513)
T ss_pred HHHHHHhcCC
Confidence 9999998755
No 9
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=1e-104 Score=848.03 Aligned_cols=479 Identities=38% Similarity=0.623 Sum_probs=458.3
Q ss_pred CceeeecCCCCEEEecCHHHHhhcccccChHHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Q 010272 1 MLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRA 80 (514)
Q Consensus 1 ~~Kmi~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~gi~p~~I~~g 80 (514)
|||||+++.|+++|||||+|||++|+++||+|||++++|++|++++||||||+++|+++||+++.+++++|+||..|++|
T Consensus 47 ~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G 126 (545)
T 1a6d_A 47 MDKMLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNG 126 (545)
T ss_dssp CEEEEECSSSCEEEECCHHHHHHHSCCCSHHHHHHHGGGGCTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred CeEEEEcCCCCeEEeCcHHHHHHhhhccchHHHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCCcccCcccceeEEEe
Q 010272 81 YNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKV 160 (514)
Q Consensus 81 ~~~a~~~~l~~L~~~s~~v~~~~~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~~~~d~~~~I~i~~i 160 (514)
|++|++.++++|+++++| + .+++.|.++++|+|+||++++|+++|++++++|+..++++. .|..++|+. +|+|+++
T Consensus 127 ~~~A~~~a~~~L~~~s~~-~-~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~-~g~~~~d~~-~I~V~k~ 202 (545)
T 1a6d_A 127 YRLAVNEARKIIDEIAEK-S-TDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVR-DGKTIVDTA-NIKVDKK 202 (545)
T ss_dssp HHHHHHHHHHHHHHHCEE-C-CCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEES-SSSEECCGG-GEEEEEC
T ss_pred HHHHHHHHHHHHHHhcCC-C-CCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhccc-CCCcccccc-eEEEEEe
Confidence 999999999999999999 7 57899999999999999999999999999999999998632 233467774 7999999
Q ss_pred cCCCCCCceeEeeEEEecccCCCCCCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHH
Q 010272 161 PGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQIL 240 (514)
Q Consensus 161 ~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~~~~~~v~~i~ 240 (514)
+|++++||++++|++|++++.++ .|+++++||||++++++|++++++.+.++.+++.+++..++++|+++++.++++|+
T Consensus 203 ~G~~~~ds~lv~G~v~dk~~~~~-~m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~ 281 (545)
T 1a6d_A 203 NGGSVNDTQFISGIVIDKEKVHS-KMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIK 281 (545)
T ss_dssp CCSCSTTCEEESEEEESCCCSCT-TSCSEEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCceeeEEEeeEEEeccCCCC-CCcceecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998 89999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEE
Q 010272 241 KFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFI 320 (514)
Q Consensus 241 ~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l 320 (514)
+.|++|||++++|++.+++||.++||++++++++++|+|||++|||+++++++++++.++|+ |+.|++.++|+++|++|
T Consensus 282 ~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~~~~~LG~-a~~v~~~~ig~~~~~~~ 360 (545)
T 1a6d_A 282 KSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGE-AETVEERKIGDDRMTFV 360 (545)
T ss_dssp HTTCCEEEESSCBCHHHHHHHHHHTCEEECSCCHHHHHHHHHHHCCCEESSGGGCCGGGCEE-EEEEEEEEETTEEEEEE
T ss_pred HhCCCEEEECCCccHHHHHHHHHCCeeEeccCCHHHHHHHHHHhCCeeecccccCCHHHCCC-ceEEEEEEecCceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred EcCCCCCeeEEEEccCCHhHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhccCCCCcchHHHHHHHHh
Q 010272 321 VDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIA 400 (514)
Q Consensus 321 ~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~a 400 (514)
++|.+++.|||+|||+|+.+++|.||+++||++++|+++++|++|||||++|++++.+|++++.+.++++|+++++|++|
T Consensus 361 ~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~A 440 (545)
T 1a6d_A 361 MGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKA 440 (545)
T ss_dssp EEESCSSCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred ecCCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988889999999999999
Q ss_pred hhhhHHHHHHhcCCCHHHHHHHHHHHHhCCCCceEEEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHhchhhhh
Q 010272 401 FEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 480 (514)
Q Consensus 401 L~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii 480 (514)
|+.||++||+|||+|+.+++.+|+..|..++ .++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|
T Consensus 441 Le~ip~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI 519 (545)
T 1a6d_A 441 LEIIPRTLAENAGIDPINTLIKLKADDEKGR-ISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVI 519 (545)
T ss_dssp HTHHHHHHHHHHTSCHHHHHHHHHHHHHTTC-TTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTCCEEC
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHhhcCC-CCcceecccCccccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999997664 689999999999999999999999999999999999999999999999
Q ss_pred cCCccC
Q 010272 481 SGIKKK 486 (514)
Q Consensus 481 ~~~~~~ 486 (514)
...|++
T Consensus 520 ~~~~~~ 525 (545)
T 1a6d_A 520 ASKKST 525 (545)
T ss_dssp ------
T ss_pred hcccCC
Confidence 887655
No 10
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=1.7e-105 Score=846.60 Aligned_cols=480 Identities=35% Similarity=0.616 Sum_probs=387.7
Q ss_pred eeecCCCCEEEecCHHHHhhcccccChHHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHH
Q 010272 4 MLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNK 83 (514)
Q Consensus 4 mi~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~ 83 (514)
||+++.|+++|||||+|||++|+++||+|||++++|++|++++||||||+++|+++||+++.+++++|+||..|++||++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~ 80 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRH 80 (500)
T ss_dssp ------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCCcccCcccceeEEEecCC
Q 010272 84 ALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGG 163 (514)
Q Consensus 84 a~~~~l~~L~~~s~~v~~~~~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~~~~d~~~~I~i~~i~G~ 163 (514)
|++.++++|++++++++..+++.|.++++|+|+||++++|+++|++++++|+..++.+. +|..++|+.++|+|++++|+
T Consensus 81 A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~-~g~~~~di~~~I~V~k~~G~ 159 (500)
T 3aq1_B 81 AAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEE-EDGLKVNVLENIKIEKRAGG 159 (500)
T ss_dssp HHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECC-SSSCEECHHHHEEEEEEESS
T ss_pred HHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccc-cCCccccccccEEEEEecCC
Confidence 99999999999999998767999999999999999999999999999999999998521 25456774457999999999
Q ss_pred CCCCceeEeeEEEecccCCCCCCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 010272 164 QLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFK 243 (514)
Q Consensus 164 ~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~~~~~~v~~i~~~~ 243 (514)
++++|++++|++|++++.|+ .|+++++||||++++++|++++++.++++.+++.+++..++++|+++++.++++|++.|
T Consensus 160 ~~~ds~lv~G~v~dk~~~~~-~m~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g 238 (500)
T 3aq1_B 160 SIDDSELIDGLVIDKERSHP-NMPEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASG 238 (500)
T ss_dssp CGGGCEEESEEEESCCCSST-TSCSEEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHTTC
T ss_pred CccceEEEeeeEEeecCCCC-CCcccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999998 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEEEcC
Q 010272 244 PDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDC 323 (514)
Q Consensus 244 ~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~ 323 (514)
+||||++++|++.+++||.++||++++++++++|+|||++|||+++++++++++.++|+ |+.|+++++|+++|++|++|
T Consensus 239 ~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~~~~~LG~-a~~v~~~~ig~~~~~~~~g~ 317 (500)
T 3aq1_B 239 ANVVFCQKGIDDMAQYYIEKAGIYAVRRVKKSDLKRLSKVTGATIIQDLDQITTEDVGT-AGLVEEKEVRGGKMTYVTGC 317 (500)
T ss_dssp CSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSCTTCCCSTTCEE-EEEEEEEECSSSEEEEEEEE
T ss_pred cCEEEECCCcCHHHHHHHHHCCEEEEEeCCHHHHHHHHHHhCCeEecccccCCHhHCCC-ceEEEEEEecCeEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CCCCeeEEEEccCCHhHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhccCCCCcchHHHHHHHHhhhh
Q 010272 324 KDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEA 403 (514)
Q Consensus 324 ~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ 403 (514)
.+++.|||+|||+|+.+++|.||+++||++++|+++++|++|||||++|++++.+|++++.+.++++|+++++|++||+.
T Consensus 318 ~~~~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ 397 (500)
T 3aq1_B 318 QNSKAVTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEALEV 397 (500)
T ss_dssp TTCCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTTH
T ss_pred CCCceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred hHHHHHHhcCCCHHHHHHHHHHHHhCCCCceEEEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHhchhhhhcCC
Q 010272 404 IPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGI 483 (514)
Q Consensus 404 ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~~ 483 (514)
||++||+|||+|+.+++.+|+..|..+. .++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|...
T Consensus 398 ip~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~ 476 (500)
T 3aq1_B 398 IPVALAENAGLDPIDIMVELRSQHEKGN-KNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVVASK 476 (500)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHTTC-TTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhcCCC-CCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999997664 689999999999999999999999999999999999999999999999887
Q ss_pred ccCC
Q 010272 484 KKKQ 487 (514)
Q Consensus 484 ~~~~ 487 (514)
|.++
T Consensus 477 ~~~~ 480 (500)
T 3aq1_B 477 GSAN 480 (500)
T ss_dssp ----
T ss_pred ccCC
Confidence 6544
No 11
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=1.1e-104 Score=849.25 Aligned_cols=484 Identities=29% Similarity=0.453 Sum_probs=460.9
Q ss_pred CceeeecCCCCEEEecCHHHHhhcccccChHHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Q 010272 1 MLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRA 80 (514)
Q Consensus 1 ~~Kmi~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~gi~p~~I~~g 80 (514)
|||||+++.|+++|||||+|||++|+++||+|||++++|++|++++||||||+++|+++||+++.+++++|+||..|++|
T Consensus 49 ~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G 128 (559)
T 3p9d_A 49 LDKMLVDDIGDFTVTNDGATILSLLDVQHPAGKILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITG 128 (559)
T ss_dssp CEEEECCSSSCCCEECCHHHHHHHHCCCSHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred CeeEeEcCCCCEEEECCHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhh-ccccCCCCcHHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCCcccCcccceeEEE
Q 010272 81 YNKALEDAVAVLDK-IAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEK 159 (514)
Q Consensus 81 ~~~a~~~~l~~L~~-~s~~v~~~~~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~~~~d~~~~I~i~~ 159 (514)
|++|++.++++|++ +++|++..+++.|.++++|+++||+.++|+++|++|+++|+.++++...++...+|++ +|+|++
T Consensus 129 ~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~-~I~I~k 207 (559)
T 3p9d_A 129 FRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVK-AVNVLK 207 (559)
T ss_dssp HHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTT-CCCEEE
T ss_pred HHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccchh-HeEEEE
Confidence 99999999999999 9999986567889999999999999999999999999999999984111222457776 499999
Q ss_pred ecCCCCCCceeEeeEEEecccCCCCCCccccc--CCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHHHHHHHHH
Q 010272 160 VPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIV--NPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCM 237 (514)
Q Consensus 160 i~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~--n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~~~~~~v~ 237 (514)
++|++++||++++|++|++++.++ .|+++++ ||||++++++|++.+++.++++.+++.+++..+.++|+++++.+++
T Consensus 208 ~~Ggs~~ds~lv~G~v~dk~~~~~-~m~~~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le 286 (559)
T 3p9d_A 208 AHGKSATESLLVPGYALNCTVASQ-AMPKRIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVK 286 (559)
T ss_dssp EESSCSSCCBCCSEECCCCCCSST-TSCSEECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHH
T ss_pred ecCCCccceeEeccEEEeecccCC-CcceeeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998 8999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCC------CCCCCCccCCccceEEEEE
Q 010272 238 QILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRP------DELQESDVGTGAGLFEVKK 311 (514)
Q Consensus 238 ~i~~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~------~~l~~~~lG~~~~~v~~~~ 311 (514)
+|++.|++|||++++|++.+++||.++||++++++++.+|+|||++|||++++++ +++++.++|+ |+.|++.+
T Consensus 287 ~I~~~g~~lvI~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~-a~~v~~~~ 365 (559)
T 3p9d_A 287 KIIDAGAQVVLTTKGIDDLCLKEFVEAKIMGVRRCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGL-CDEVVQAK 365 (559)
T ss_dssp HHHTTCCSEEEESSCCCGGGTHHHHHTTCEEESSCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCC-EEEEEEEE
T ss_pred HHHhhCCCEEEEcCCCCHHHHHHHHHcCCceEccCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCcc-ceEEEEEE
Confidence 9999999999999999999999999999999999999999999999999999998 7899999999 99999999
Q ss_pred ECCeEEEEEEcCCCCCeeEEEEccCCHhHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhccCCCCcch
Q 010272 312 IGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEK 391 (514)
Q Consensus 312 ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~ 391 (514)
+++++|++|++|.++++|||+|||+|+.+++|.||+++||++++|+++++|++|||||++|++|+.+|++++.+.++++|
T Consensus 366 ig~~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq 445 (559)
T 3p9d_A 366 FSDDECILIKGTSKHSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQ 445 (559)
T ss_dssp CSSCEEECEEEESSSCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHH
T ss_pred EcCceEEEEEcCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred HHHHHHHHhhhhhHHHHHHhcCCCHHHHHHHHHHHHhCCCCc-----------eEEEeCCCCccccccccccccchHHHH
Q 010272 392 WPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENA-----------WIGIDGNTGAISDMKERKIWDAYNVKA 460 (514)
Q Consensus 392 ~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~-----------~~G~d~~~~~i~d~~~~gI~dp~~vk~ 460 (514)
+++++|++||+.||++||+|||+|+.+++.+|+..|.+++.+ ++|||+.+|++.||++.|||||+.||+
T Consensus 446 ~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~ 525 (559)
T 3p9d_A 446 LAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKV 525 (559)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC----CCCCCCCEEECTTSSSEEESTTSSCCEEHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccccccccccccceeEECCCCcEeehhhccCEecHHHHH
Confidence 999999999999999999999999999999999999765411 799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhchhhhhcCCccCC
Q 010272 461 QTFKTAIEAACMLLRIDDIVSGIKKKQ 487 (514)
Q Consensus 461 ~~l~~A~e~a~~iL~id~ii~~~~~~~ 487 (514)
++|++|+|+|++|||||++|...|+++
T Consensus 526 ~al~~A~e~a~~iL~id~ii~~~~~~~ 552 (559)
T 3p9d_A 526 KSLKSALEACVAILRIDTMITVDPEPP 552 (559)
T ss_dssp HHHHHHHHHHHHHHTEEEEEECCCCCC
T ss_pred HHHHHHHHHHHHHHhHHhhhhcCCccc
Confidence 999999999999999999998876655
No 12
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=2.7e-105 Score=852.41 Aligned_cols=483 Identities=31% Similarity=0.553 Sum_probs=458.5
Q ss_pred CceeeecCCCCEEEecCHHHHhhcccccChHHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Q 010272 1 MLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRA 80 (514)
Q Consensus 1 ~~Kmi~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~gi~p~~I~~g 80 (514)
|||||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||||||+++|+++||+++.+++++|+||..|++|
T Consensus 49 ~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G 128 (550)
T 3p9d_G 49 SDILIVTSNQKTTISNDGATILKLLDVVHPAAKTLVDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKG 128 (550)
T ss_dssp CCEEEECSSSCEEEECCHHHHTTTSCCCSHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHH
T ss_pred CcEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHHHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccCCCCc---HHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCCcccCcccceeE
Q 010272 81 YNKALEDAVAVLDKIAMPIDTND---RATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKV 157 (514)
Q Consensus 81 ~~~a~~~~l~~L~~~s~~v~~~~---~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~~~~d~~~~I~i 157 (514)
|++|++.++++|++++++++..+ ++.|.++++|+++||+.+.|+++|++++++|+..+++ .++|++ +|.|
T Consensus 129 ~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~------~~~dl~-~I~V 201 (550)
T 3p9d_G 129 YRKAVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDR------NDLDDK-LIGI 201 (550)
T ss_dssp HHHHHHHHHHHHHHSEECCCCC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCS------SSCCGG-GCCC
T ss_pred HHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHHHHHhCc------cccCch-heeE
Confidence 99999999999999999987655 7789999999999999999999999999999999974 246775 6999
Q ss_pred EEecCCCCCCceeEeeEEEecccCCCC--CCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHHHHHHH
Q 010272 158 EKVPGGQLEDSRVLKGVMFNKDVVAPG--KMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENL 235 (514)
Q Consensus 158 ~~i~G~~~~ds~li~Giv~~~~~~~~~--~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~~~~~~ 235 (514)
++++|++++||++++|++|++++.+|. +|+++++||||++++++|++++++.++++.+++.+++.++++.|+++++++
T Consensus 202 ikv~Gg~~~ds~lv~G~~~dk~~~s~yf~~~~~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~ 281 (550)
T 3p9d_G 202 KKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEK 281 (550)
T ss_dssp CBCCSSCGGGCCCCSSEEECCCSSCTTCSCSCSCCSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHH
T ss_pred EEecCCCccceeEEeeEEEeccccccccccCcccccCceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999873 789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCe
Q 010272 236 CMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDE 315 (514)
Q Consensus 236 v~~i~~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~~v~~~~ig~~ 315 (514)
+++|++.|++||+++++|++.+++||.++||++++++++++|+||+++||+.++++++++++.++|+ |+.|++.++|++
T Consensus 282 v~~I~~~g~~vVi~~~~I~dla~~~L~~~gI~~v~~v~k~~lerIa~~tGa~iis~l~~l~~~~LG~-a~~v~~~~ig~e 360 (550)
T 3p9d_G 282 LRQVEETGANIVLSKLPIGDLATQFFADRNIFCAGRVSADDMNRVIQAVGGSIQSTTSDIKPEHLGT-CALFEEMQIGSE 360 (550)
T ss_dssp HHHHHTTTCSEEEESSCCCHHHHHTTGGGTCEEEECCCTTHHHHHHHHTCCCCBSSGGGCCGGGCCC-CSBCCCCCCSSS
T ss_pred HHHHHhcCCCEEEECCCccHHHHHHHHHcCCccccCcCHHHHHHHHHHhCCceecchhhCCHHHcCC-ceEEEEEEeCCe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEEEEEcCCCCCeeEEEEccCCHhHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhccCCCCcchHHHH
Q 010272 316 FFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYE 395 (514)
Q Consensus 316 ~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~ 395 (514)
+|++|++|+++++|||+|||+|+.+++|.||+++|||+++|+++++|++|||||++|++++.+|++++.+.++++|++++
T Consensus 361 ~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~ 440 (550)
T 3p9d_G 361 RYNLFQGCPQAKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIIN 440 (550)
T ss_dssp CCEEEBCCTTCCCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCSTTHHHHH
T ss_pred EEEEEecCCCCceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred HHHHhhhhhHHHHHHhcCCCHHHHHHHHHHHHhCCCCceEEEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHhc
Q 010272 396 AAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLR 475 (514)
Q Consensus 396 ~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~ 475 (514)
+|++||+.||++||+|||+|+.+++.+|+..|..++ +++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||
T Consensus 441 ~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~-~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~ 519 (550)
T 3p9d_G 441 AFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGE-KWYGVVFETENIGDNFAKFVWEPALVKINALNSATEATNLILS 519 (550)
T ss_dssp HHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSC-SCCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCC-CceeeeCCCCcccchHhccCEecHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999987665 6899999999999999999999999999999999999999999
Q ss_pred hhhhhcCCccCCCCCCC
Q 010272 476 IDDIVSGIKKKQAPGSG 492 (514)
Q Consensus 476 id~ii~~~~~~~~~~~~ 492 (514)
||++|...|+++.+..+
T Consensus 520 id~ii~~~~~~~~~~~~ 536 (550)
T 3p9d_G 520 VDETITNKGSESANAGM 536 (550)
T ss_dssp EEEEECCCCCC------
T ss_pred HHHHhhCCCcccccCCC
Confidence 99999988777655443
No 13
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.9e-103 Score=834.36 Aligned_cols=475 Identities=32% Similarity=0.535 Sum_probs=457.2
Q ss_pred CceeeecCCCCEEEecCHHHHhhcccccChHHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Q 010272 1 MLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRA 80 (514)
Q Consensus 1 ~~Kmi~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~gi~p~~I~~g 80 (514)
|||||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||+++|+++||+++.+++++|+||..|++|
T Consensus 36 ~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G 115 (518)
T 3iyg_D 36 MDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISES 115 (518)
T ss_pred CceeeeCCCCCeEEECCHHHHHHHcccchHHHHHHHHHHHHhhhhhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCCcccCcccceeEEEe
Q 010272 81 YNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKV 160 (514)
Q Consensus 81 ~~~a~~~~l~~L~~~s~~v~~~~~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~~~~d~~~~I~i~~i 160 (514)
|++|++.++++|+++++|++..+++.|.++++|+++||+.+.|.++|++++++|+..++....+| .+|++ +|+|+++
T Consensus 116 ~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~--~~d~~-~I~V~k~ 192 (518)
T 3iyg_D 116 FQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATAT--SVDLR-DIKIVKK 192 (518)
T ss_pred HHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhhHHHHHHHHHHHHHHhhccccCC--Ccccc-eEEEEEc
Confidence 99999999999999999998767899999999999999999999999999999999997421123 46775 6999999
Q ss_pred cCCCCCCceeEeeEEEecccCCCCCCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHH
Q 010272 161 PGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQIL 240 (514)
Q Consensus 161 ~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~~~~~~v~~i~ 240 (514)
.|++..||++++|++|++++.+ .||+.++||||++++++|++++.+++.++.+++++++..+++.|+++++.++++|+
T Consensus 193 ~Gg~~~ds~lv~G~~~dk~~~~--~mp~~i~n~kIlll~~~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~ 270 (518)
T 3iyg_D 193 LGGTIDDCELVEGLVLTQKVAN--SGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIK 270 (518)
T ss_pred CCCChhhheEeccEEEeccccc--CCCccccCceEEEEEeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998 79999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEEEe-----CCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECC-
Q 010272 241 KFKPDLVIT-----EKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGD- 314 (514)
Q Consensus 241 ~~~~~lVi~-----~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~~v~~~~ig~- 314 (514)
+.|+|||++ +++|++.+++||.++||++++++++.+|+|||++|||+++++++++++.++|+ |+.|++.++|+
T Consensus 271 ~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~I~av~~~~~~~le~ia~~tGa~ii~~l~~l~~~~LG~-a~~v~~~~~g~~ 349 (518)
T 3iyg_D 271 KTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICKTIGTKPVAHVDQFTADMLGS-AELAEEVSLNGS 349 (518)
T ss_pred hcCCCEEEEeccccccCcCHHHHHHHHHcCcEEEecCCHHHHHHHHHHhCCEEecccccCCHHHCCc-CcEEEEEEeCCC
Confidence 999999999 89999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred eEEEEEEcCCC-CCeeEEEEccCCHhHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhccCCCCcchHH
Q 010272 315 EFFAFIVDCKD-PKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWP 393 (514)
Q Consensus 315 ~~~~~l~~~~~-~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~ 393 (514)
++|.+|++|++ +++|||+|||+|+.+++|.||+++||++++|+++++|++|||||++|++++.+|++++.+.++++|++
T Consensus 350 ~~~~~~~g~~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~ 429 (518)
T 3iyg_D 350 GKLIKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYC 429 (518)
T ss_pred ceEEEEECCCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHhhcCChHHHHH
Confidence 89999999987 89999999999999999999999999999999999999999999999999999999998899999999
Q ss_pred HHHHHHhhhhhHHHHHHhcCCCHHHHHHHHHHHHhCCCCceEEEeCCCCccccccccccccchHHHHHHHHHHHHHHHHH
Q 010272 394 YEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACML 473 (514)
Q Consensus 394 ~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~i 473 (514)
+++|++||+.||++||+|||+|+.+++.+|++.|..++ +++|||+.+|++.||++.|||||+.||+++|++|+|+|++|
T Consensus 430 i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~i 508 (518)
T 3iyg_D 430 IRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGE-KTTGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSI 508 (518)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccC-CceeEeCCCCcccchhhccCEEcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998765 68999999999999999999999999999999999999999
Q ss_pred hchhhhhcC
Q 010272 474 LRIDDIVSG 482 (514)
Q Consensus 474 L~id~ii~~ 482 (514)
||||+||+.
T Consensus 509 L~iD~ii~~ 517 (518)
T 3iyg_D 509 LKIDDVVNT 517 (518)
T ss_pred HhhcceEec
Confidence 999999865
No 14
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.1e-103 Score=830.01 Aligned_cols=472 Identities=29% Similarity=0.552 Sum_probs=454.8
Q ss_pred CceeeecCCCCEEEecCHHHHhhcccccChHHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Q 010272 1 MLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRA 80 (514)
Q Consensus 1 ~~Kmi~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~gi~p~~I~~g 80 (514)
|||||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||+++|+++||+++.+++++|+||..|++|
T Consensus 35 ~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~akll~~~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G 114 (517)
T 3iyg_Z 35 TMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEG 114 (517)
T ss_pred CeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCCcccCcccceeEEEe
Q 010272 81 YNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKV 160 (514)
Q Consensus 81 ~~~a~~~~l~~L~~~s~~v~~~~~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~~~~d~~~~I~i~~i 160 (514)
|++|++.++++|++++++++. +++.|.++++|+++||+.+.+.+.|++++++|+..+... ...+|++ +|+|+++
T Consensus 115 ~~~A~~~a~~~L~~~s~~v~~-~~~~L~~va~tsl~sKi~~~~~d~la~l~vdaV~~V~~~----~~~~dl~-~I~I~k~ 188 (517)
T 3iyg_Z 115 FEAAKEKALQFLEQVKVSKEM-DRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQ----DEPIDLF-MVEIMEM 188 (517)
T ss_pred HHHHHHHHHHHHHhhCcCCCC-CHHHHHHHHHHHhccccchhHHHHHHHHHHHHhheeccC----CCcCChh-Hheeeee
Confidence 999999999999999999875 688999999999999999999999999999999998642 2457775 6999999
Q ss_pred cCCCCCCceeEeeEEEecccCCCCCCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHH
Q 010272 161 PGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQIL 240 (514)
Q Consensus 161 ~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~~~~~~v~~i~ 240 (514)
+|+...||++++|++|++++.+| .|+++++||||++++++|++++++.+.++.+++++++..+++.|++++++.+++|+
T Consensus 189 ~Gg~~~ds~lv~G~v~dk~~~~p-~m~~~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~ 267 (517)
T 3iyg_Z 189 KHKSETDTSLIRGLVLDHGARHP-DMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKII 267 (517)
T ss_pred cCCCccccceEeeEEEeccCCCC-CccccccCCeEEEecccccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 89999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCc---------EEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCc-cCCccceEEEE
Q 010272 241 KFKPD---------LVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESD-VGTGAGLFEVK 310 (514)
Q Consensus 241 ~~~~~---------lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~-lG~~~~~v~~~ 310 (514)
..+++ ||+++++|++.+++||.++||++++++++++|+|||++|||+++++++++++.+ +|+ |+ |++.
T Consensus 268 ~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~gI~~v~~v~~~~leria~~tGa~iv~~l~~l~~~~~LG~-a~-v~e~ 345 (517)
T 3iyg_Z 268 ELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIIALRRAKRRNMERLTLACGGIALNSLDDLNPDCLLGH-AG-VYEY 345 (517)
T ss_pred HhhhhhhhccCCceEEEecccCCHHHHHHHHHCCCEEEEecCHHHHHHHHHHhCCEEecchhhCcccccCCc-ce-EEEE
Confidence 88876 589999999999999999999999999999999999999999999999999999 999 99 9999
Q ss_pred EECCeEEEEEEcCCCCCeeEEEEccCCHhHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhccCCCCcc
Q 010272 311 KIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIE 390 (514)
Q Consensus 311 ~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~ 390 (514)
++|+++|++|++|++++.|||+|||+|+.+++|.||+++||++++|+++++|++|||||++|++++.+|++++.+.++++
T Consensus 346 ~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~e 425 (517)
T 3iyg_Z 346 TLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRA 425 (517)
T ss_pred EEcCceEEEEeCCCCchhheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHhccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998889999
Q ss_pred hHHHHHHHHhhhhhHHHHHHhcCCCHHHHHHHHHHHHhCCCCceEEEeCCCCccccccccccccchHHHHHHHHHHHHHH
Q 010272 391 KWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAA 470 (514)
Q Consensus 391 ~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a 470 (514)
|+++++|++||+.+|++||+|||+|+.+++.+|++.|..++ +++|||+.+|++.||++.|||||+.||+++|++|+|+|
T Consensus 426 q~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a 504 (517)
T 3iyg_Z 426 QLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESG-QLVGVDLNTGEPMVAAEAGIWDNYCVKKQLLHSCTVIA 504 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC-CcEEEeCCCCcccchhhccCeecHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999997665 78999999999999999999999999999999999999
Q ss_pred HHHhchhhhhcC
Q 010272 471 CMLLRIDDIVSG 482 (514)
Q Consensus 471 ~~iL~id~ii~~ 482 (514)
++|||||++|..
T Consensus 505 ~~iL~iD~ii~~ 516 (517)
T 3iyg_Z 505 TNILLVDEIMRA 516 (517)
T ss_pred HHHHHHHHHhhC
Confidence 999999999864
No 15
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.3e-102 Score=828.35 Aligned_cols=476 Identities=35% Similarity=0.558 Sum_probs=456.9
Q ss_pred CceeeecCCCCEEEecCHHHHhhcccccChHHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Q 010272 1 MLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRA 80 (514)
Q Consensus 1 ~~Kmi~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~gi~p~~I~~g 80 (514)
|||||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||+++|+++||+++.+++.+|+||..|++|
T Consensus 35 ~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~Akll~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G 114 (515)
T 3iyg_E 35 LDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADG 114 (515)
T ss_pred CeEEEEcCCCCeEEeCcHHHHHHHcccCCHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccCCC--CcHHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCCcccCcccceeEE
Q 010272 81 YNKALEDAVAVLDKIAMPIDT--NDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVE 158 (514)
Q Consensus 81 ~~~a~~~~l~~L~~~s~~v~~--~~~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~~~~d~~~~I~i~ 158 (514)
|++|++.++++|+++++|++. .+++.|.++++|+++||+.+.+.+.|++++++|+..+... ...++|+. +|+|+
T Consensus 115 ~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~~l~~l~~dav~~V~~~---~~~~~d~~-~I~I~ 190 (515)
T 3iyg_E 115 YEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADM---QRRDVDFE-LIKVE 190 (515)
T ss_pred HHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHhhccc---ccCCCCcc-cEEEE
Confidence 999999999999999998854 4578999999999999998889999999999999998642 12346664 69999
Q ss_pred EecCCCCCCceeEeeEEEecccCCCCCCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHH
Q 010272 159 KVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQ 238 (514)
Q Consensus 159 ~i~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~~~~~~v~~ 238 (514)
+++|+++.||++++|++|++++.+| .|++.++||+|++++++|++.+++.++.+.+++++++..+.+.|+++++.++++
T Consensus 191 k~~Ggs~~ds~lv~G~~~dk~~~~~-~m~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lek 269 (515)
T 3iyg_E 191 GKVGGRLEDTKLIKGVIVDKDFSHP-QMPKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQ 269 (515)
T ss_pred EecCCCcccceEEeeEEEecccccc-cccccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECC--eE
Q 010272 239 ILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGD--EF 316 (514)
Q Consensus 239 i~~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~~v~~~~ig~--~~ 316 (514)
+++.|+||||++++|++.+++||.++||++++++++.+|+|||++|||+++++++++++.++|+ |+.|+++++|+ ++
T Consensus 270 I~~~g~~vvi~~~~I~~~al~~L~~~~I~~v~~v~k~~le~ia~~tGa~ii~~l~~l~~~~LG~-a~~v~~~~ig~~k~~ 348 (515)
T 3iyg_E 270 IKETGANLAVCQWGFDDEANHLLLQNDLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGF-AGLVKEISFGTTKDK 348 (515)
T ss_pred HHhcCCCEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCCEEecccccCCHHHCCc-ceEEEEEEeccccce
Confidence 9999999999999999999999999999999999999999999999999999999999999999 99999999987 89
Q ss_pred EEEEEcCCCCCeeEEEEccCCHhHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhccCCCCcchHHHHH
Q 010272 317 FAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEA 396 (514)
Q Consensus 317 ~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~ 396 (514)
|++|++|.+++.|||+|||+|+.+++|.||+++||++++|+++++|++|||||++|++++.+|++++.+.++.+|+++++
T Consensus 349 ~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~ 428 (515)
T 3iyg_E 349 MLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRA 428 (515)
T ss_pred EEEEEcCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998889999999999
Q ss_pred HHHhhhhhHHHHHHhcCCCHHHHHHHHHHHHhCCCCceEEEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHhch
Q 010272 397 AAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRI 476 (514)
Q Consensus 397 ~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~i 476 (514)
|++||+.||++||+|||+|+.+++.+|+..|..+.++++|||+.+|++.||++.|||||+.||+++|++|+|+|++||||
T Consensus 429 ~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~i 508 (515)
T 3iyg_E 429 FADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMKHQHVIETLIGKKQQISLATQMVRMILKI 508 (515)
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHhH
Confidence 99999999999999999999999999999997644478999999999999999999999999999999999999999999
Q ss_pred hhhhcC
Q 010272 477 DDIVSG 482 (514)
Q Consensus 477 d~ii~~ 482 (514)
|++|..
T Consensus 509 D~ii~~ 514 (515)
T 3iyg_E 509 DDIRKP 514 (515)
T ss_pred HHhhcC
Confidence 999865
No 16
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=3.8e-104 Score=844.71 Aligned_cols=484 Identities=59% Similarity=0.978 Sum_probs=455.8
Q ss_pred CceeeecCCCCEEEecCHHHHhhcccccChHHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHH-HhcCCChhhHHH
Q 010272 1 MLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEF-IDKNYHPTVICR 79 (514)
Q Consensus 1 ~~Kmi~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~l-i~~gi~p~~I~~ 79 (514)
|||||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||+++|+++||+++.++ +.+|+||..|++
T Consensus 44 ~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~ 123 (590)
T 3p9d_C 44 MLKMLLDPMGGLVLTNDGHAILREIDVAHPAAKSMLELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQ 123 (590)
T ss_dssp CCCEEECTTTCCBCCCCHHHHHHHSCCCCHHHHTHHHHTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHH
T ss_pred CeEEEECCCCCeEEECCHHHHHHHhhCCCHHHHHHHHHHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHH
Confidence 7999999999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCC-----cccCcccc
Q 010272 80 AYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGL-----REVDIKKY 154 (514)
Q Consensus 80 g~~~a~~~~l~~L~~~s~~v~~~~~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~-----~~~d~~~~ 154 (514)
||++|++.++++|+++++|++..+++.|.++++|+++||+.++|+++|++++++|+..++++...+. .++|+.++
T Consensus 124 G~~~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~ 203 (590)
T 3p9d_C 124 ALKKALTDALEVIKQVSKPVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRY 203 (590)
T ss_dssp HHHHHHHHHHHHHHHHCCTTTTCCTHHHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSS
T ss_pred HHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhc
Confidence 9999999999999999999987678899999999999999999999999999999999986321111 25777778
Q ss_pred eeEEEecCCCCCCceeEeeEEEecccCCCCCCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHHHHHH
Q 010272 155 IKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIEN 234 (514)
Q Consensus 155 I~i~~i~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~~~~~ 234 (514)
|+|++++|+++.||++++|++|++++.++ +|+++++||||++++++|++++++.++++.+++++++.++++.|++++++
T Consensus 204 I~I~ki~Ggs~~ds~lv~Gmvfdk~~~~~-~m~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~ 282 (590)
T 3p9d_C 204 VRVEKIPGGDVLDSRVLKGVLLNKDVVHP-KMSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQL 282 (590)
T ss_dssp SCEEEESSCCGGGCBCCSSEEECCCCSCT-TSCSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHH
T ss_pred eEEEEecCCCcccceeeeEEEEecccCCC-CCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECC
Q 010272 235 LCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGD 314 (514)
Q Consensus 235 ~v~~i~~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~~v~~~~ig~ 314 (514)
++++|++.|++|||++++|++.+++||.++||++|+++++.+|+|||++|||+++++++++++.++|+.|+.|++.++++
T Consensus 283 ~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I~av~~~~k~~le~ia~~TGa~iis~l~~~~~~~LG~~a~~v~~~~ig~ 362 (590)
T 3p9d_C 283 MCEQILAVRPTLVITEKGVSDLAQHYLLKGGCSVLRRVKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLFKVEMIGD 362 (590)
T ss_dssp HHHHHHTTCCSEECCSSCCCTHHHHHHHHTTCCCCCCCCHHHHHHHHHHHTCCCCSCSTTCCTTSCBCCCSEEECCEETT
T ss_pred HHHHHHhcCCcEEEecCCcCHHHHHHHHhccceeeccCCHHHHHHHHHHhCCceeecccCCCHHHhCCcCCEEEEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999996599999999999
Q ss_pred eEEEEEEcCCCCCe--------------------------------------------------------eEEEEccCCH
Q 010272 315 EFFAFIVDCKDPKA--------------------------------------------------------CTVLLRGASK 338 (514)
Q Consensus 315 ~~~~~l~~~~~~~~--------------------------------------------------------~TIll~G~t~ 338 (514)
++|++|++|.++.. |||+|||+|+
T Consensus 363 d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~~~~l~ggv~tI~lrg~te 442 (590)
T 3p9d_C 363 EYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHHHHHGSGKACTIMLRGGSK 442 (590)
T ss_dssp EECEEECC---------------------------------------------------------CCCSCCCEEEECSST
T ss_pred cEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHHHHhhcCCeeEEEEcCCCH
Confidence 99999999976665 9999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhccCCCCcchHHHHHHHHhhhhhHHHHHHhcCCCHHH
Q 010272 339 DLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIR 418 (514)
Q Consensus 339 ~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~ 418 (514)
.+++|.||+++||++++|+++++|++|||||++|++++.+|++++.+.++++|+++++|++||+.||++||+|||+|+.+
T Consensus 443 ~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~ 522 (590)
T 3p9d_C 443 DILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQWPYQAVADAMECIPRTLIQNAGGDPIR 522 (590)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTHHHHHHHHHHTTHHHHHHHHTTCSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 99999999999999999999999889999999999999999999888899999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCceEEEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHhchhhhhcCCccC
Q 010272 419 TMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK 486 (514)
Q Consensus 419 ~~~~l~~~~~~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~~~~~ 486 (514)
++.+|+..|..++ +++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|...|++
T Consensus 523 vv~~l~~~h~~~~-~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~ 589 (590)
T 3p9d_C 523 LLSQLRAKHAQGN-FTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGVRKQ 589 (590)
T ss_dssp HHHHHHHHHTTSC-TTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSEEEEECCCC--
T ss_pred HHHHHHHHHhcCC-CCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 9999999997765 789999999999999999999999999999999999999999999999877643
No 17
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=5.6e-104 Score=839.35 Aligned_cols=476 Identities=29% Similarity=0.515 Sum_probs=458.6
Q ss_pred CceeeecCCCCEEEecCHHHHhhcccccChHHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Q 010272 1 MLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRA 80 (514)
Q Consensus 1 ~~Kmi~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~gi~p~~I~~g 80 (514)
|||||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||+++|+++||+++.+++++|+||..|++|
T Consensus 44 ~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G 123 (528)
T 3p9d_D 44 MDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADS 123 (528)
T ss_dssp CCEEEECSSCCEEEECCHHHHHHHSCCCCTTHHHHHHHHHHHHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred CeEEEEcCCCCeEEECCHHHHHHHcccCCHHHHHHHHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCCcccCcccceeEEEe
Q 010272 81 YNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKV 160 (514)
Q Consensus 81 ~~~a~~~~l~~L~~~s~~v~~~~~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~~~~d~~~~I~i~~i 160 (514)
|++|++.++++|+++++|++..+++.|.++++|+++||+.++|+++|++++++|+.++++. .++ .+|++ +|+|+++
T Consensus 124 ~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~-~~~--~i~v~-~I~I~k~ 199 (528)
T 3p9d_D 124 FQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDE-NSK--NVDLN-DIRLVKK 199 (528)
T ss_dssp HHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCSTTHHHHHHHHHHHHHTTCCT-TTT--CCCGG-GSBCCCC
T ss_pred HHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHhccc-cCC--ccceE-EEEEEEe
Confidence 9999999999999999999877799999999999999999999999999999999999852 123 47776 5999999
Q ss_pred cCCCCCCceeEeeEEEecccCCCCCCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHH
Q 010272 161 PGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQIL 240 (514)
Q Consensus 161 ~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~~~~~~v~~i~ 240 (514)
+|++++||++++|++|++++.||..|+++++||||++++++|++++++.++++.+++.+++..++++|+++++.++++|+
T Consensus 200 ~Gg~~~ds~lv~G~v~dk~~~~~~~m~~~ien~kIll~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~ 279 (528)
T 3p9d_D 200 VGGTIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIK 279 (528)
T ss_dssp CSSCSCCCEEESSCBCCCCCCCSSSCCSEESSEEEEEECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHH
T ss_pred cCCCccceEEEeeeEEeecccCcccCcccccCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998339999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEEEeCCCC-----CHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCe
Q 010272 241 KFKPDLVITEKGL-----SDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDE 315 (514)
Q Consensus 241 ~~~~~lVi~~~~i-----~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~~v~~~~ig~~ 315 (514)
+.|+||||++++| ++.+++||.++||++++++++.+|+|||++|||+++++++++++.++|+ |+.|++.++|++
T Consensus 280 ~~g~~vvi~~~~I~~~a~~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~ii~~~~~l~~~~LG~-a~~v~~~~ig~~ 358 (528)
T 3p9d_D 280 KAKCNVLLIQKSILRDAVNDLALHFLSKLNIMVVKDIEREEIEFLSKGLGCKPIADIELFTEDRLDS-ADLVEEIDSDGS 358 (528)
T ss_dssp HTTCCEEEESSCSCTTSCSCHHHHHHTTTSCCEEECCCTHHHHHHHHHHTCCCCSCSTTCCSSSEEE-ESCEECCEETTE
T ss_pred hcCCCEEEEeCCcccccCCHHHHHHHHHcCcEEEEeCCHHHHHHHHHHHCCEEecccccCCHHHCCc-ccEEEEEEECCE
Confidence 9999999999999 9999999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEEEEEcCC--C-CCeeEEEEccCCHhHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhccCCCCcchH
Q 010272 316 FFAFIVDCK--D-PKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKW 392 (514)
Q Consensus 316 ~~~~l~~~~--~-~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~ 392 (514)
+|.+|++|+ + +++|||+|||+|+.+++|.||+++||++++|+++++|++|||||++|++++.+|++++.+.++++|+
T Consensus 359 ~~~~i~g~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~ 438 (528)
T 3p9d_D 359 KIVRVTGIRNNNARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAF 438 (528)
T ss_dssp ECCBCTTBCCGGGCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHT
T ss_pred EEEEEEcccccCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHH
Confidence 999999998 6 8999999999999999999999999999999999999999999999999999999999888899999
Q ss_pred HHHHHHHhhhhhHHHHHHhcCCCHHHHHHHHHHHHhCCCCceEEEeCCCCccccccccccccchHHHHHHHHHHHHHHHH
Q 010272 393 PYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACM 472 (514)
Q Consensus 393 ~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~ 472 (514)
++++|++||+.||++||+|||+|+.+++.+|+..|.+++ +++|||+.+|++.||++.|||||+.||+++|++|+|+|++
T Consensus 439 ~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~-~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~ 517 (528)
T 3p9d_D 439 IWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGE-LNDGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKS 517 (528)
T ss_dssp THHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSS-CCCCCCSSSSSCCCHHHHCCEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccC-CccceecCCCCccchHhccCeecHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999887665 7899999999999999999999999999999999999999
Q ss_pred HhchhhhhcC
Q 010272 473 LLRIDDIVSG 482 (514)
Q Consensus 473 iL~id~ii~~ 482 (514)
|||||+||+.
T Consensus 518 iL~iD~ii~~ 527 (528)
T 3p9d_D 518 ILRIDDIAFS 527 (528)
T ss_dssp HHHCSCCCBC
T ss_pred HHhhhHheec
Confidence 9999999865
No 18
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=3e-102 Score=830.89 Aligned_cols=479 Identities=30% Similarity=0.506 Sum_probs=455.2
Q ss_pred CceeeecCCCCEEEecCHHHHhhcccccChHHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Q 010272 1 MLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRA 80 (514)
Q Consensus 1 ~~Kmi~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~gi~p~~I~~g 80 (514)
|||||+++.|+++|||||+|||++|+++||+|||++++|++|++++||||||+++|+++||+++.+++++|+||..|++|
T Consensus 70 ~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G 149 (562)
T 3p9d_E 70 LDKILISPDGEITITNDGATILSQMELDNEIAKLLVQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANG 149 (562)
T ss_dssp CEEEEECSSSCEEEESCHHHHHHHSCCCSHHHHHHHHHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred CeEEEEcCCCCEEEECCHHHHHHHccCCCHHHHHHHHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccCCCCc----HHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCCcccCccccee
Q 010272 81 YNKALEDAVAVLDKIAMPIDTND----RATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIK 156 (514)
Q Consensus 81 ~~~a~~~~l~~L~~~s~~v~~~~----~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~~~~d~~~~I~ 156 (514)
|++|++.++++|++++++++..+ ++.|.++++|+++||+.+.+.++|++++++|+..+... ..+++|+. +|+
T Consensus 150 ~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~---~~~~~d~~-~I~ 225 (562)
T 3p9d_E 150 FDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDK---DRKDVDFD-LIK 225 (562)
T ss_dssp HHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTT---TCSCCCCC-CCE
T ss_pred HHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeeccc---ccCCCCcc-cEE
Confidence 99999999999999999987532 37899999999999999999999999999999998642 12356774 699
Q ss_pred EEEecCCCCCCceeEeeEEEecccCCCCCCcccc------cCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHH
Q 010272 157 VEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKI------VNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEE 230 (514)
Q Consensus 157 i~~i~G~~~~ds~li~Giv~~~~~~~~~~~~~~~------~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~ 230 (514)
|++++|++++||++++|++|++++.+| .|++.+ +|++|++++++|++.+.+.++++.+++.+++..+.+.|++
T Consensus 226 I~k~~Ggs~~ds~lveGmv~dk~~~sp-~m~~~~~~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~ 304 (562)
T 3p9d_E 226 MQGRVGGSISDSKLINGVILDKDFSHP-QMPKCVLPKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQD 304 (562)
T ss_dssp EEEESSSCGGGCEEESSEEESSCCCTT-SCCC-----TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHH
T ss_pred EEEecCCChhhhceeeeEEEecCCCCC-CcCcccccccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHH
Confidence 999999999999999999999999998 899998 9999999999999999998899999999999999999999
Q ss_pred HHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEE
Q 010272 231 YIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVK 310 (514)
Q Consensus 231 ~~~~~v~~i~~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~~v~~~ 310 (514)
+++.++++|++.|++|||++++|++.+++||.++||++++++++.+|+|||++|||+++++++++++.++|+ |+.|+++
T Consensus 305 ~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I~~v~~v~k~~le~ia~~TGa~iis~l~~l~~~~LG~-a~~v~~~ 383 (562)
T 3p9d_E 305 KFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDLPAVRWVGGQELEHIAISTNGRIVPRFQDLSKDKLGT-CSRIYEQ 383 (562)
T ss_dssp HHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTCCCEECCCTTTHHHHHHHHCCCEEESSSCCCTTSCEE-CSCEEEE
T ss_pred HHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCCEEEeccccCCHHHCCc-ceEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred EECC--eEEEEEEcCCCCCeeEEEEccCCHhHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhccCCCC
Q 010272 311 KIGD--EFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEG 388 (514)
Q Consensus 311 ~ig~--~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~~~~~~~~ 388 (514)
++|+ ++|++|++|.+++.|||+|||+|+.+++|.||+++||++++|+++++|++|||||++|++++.+|++++.+.++
T Consensus 384 ~ig~~~~~~~~i~g~~~~~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g 463 (562)
T 3p9d_E 384 EFGTTKDRMLIIEQSKETKTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRG 463 (562)
T ss_dssp CCSSSSCCEEEECCCSCCSCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTTCT
T ss_pred EeccCCceEEEEecCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHHhccCcc
Confidence 9985 89999999999999999999999999999999999999999999999999999999999999999999988899
Q ss_pred cchHHHHHHHHhhhhhHHHHHHhcCCCHHHHHHHHHHHHhCCCCceEEEeCCCCccccccccccccchHHHHHHHHHHHH
Q 010272 389 IEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIE 468 (514)
Q Consensus 389 ~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e 468 (514)
++|+++++|++||+.||++||+|||+|+.+++.+|+..|..+.++++|||+.+|++.||++.|||||+.||+++|++|+|
T Consensus 464 ~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e 543 (562)
T 3p9d_E 464 IDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKELFVVDPFIGKKQQILLATQ 543 (562)
T ss_dssp THHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBTTTTBCCBTTTTTCEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEecCCCcccchHhccCEEcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999875444789999999999999999999999999999999999
Q ss_pred HHHHHhchhhhhcCCcc
Q 010272 469 AACMLLRIDDIVSGIKK 485 (514)
Q Consensus 469 ~a~~iL~id~ii~~~~~ 485 (514)
+|++|||||++|...+.
T Consensus 544 ~a~~iL~iD~ii~~~~~ 560 (562)
T 3p9d_E 544 LCRMILKIDNVIISGKD 560 (562)
T ss_dssp HHHHHHTEEEEEECCC-
T ss_pred HHHHHHHHHHhhcCCCC
Confidence 99999999999987554
No 19
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=7.3e-104 Score=844.36 Aligned_cols=481 Identities=27% Similarity=0.481 Sum_probs=442.7
Q ss_pred CceeeecCCCCEEEecCHHHHhhcccccChHHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Q 010272 1 MLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRA 80 (514)
Q Consensus 1 ~~Kmi~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~gi~p~~I~~g 80 (514)
|||||+++.|+++|||||+|||++|+++||+|||++++|++|++++||||||+++|+++||+++.+++.+|+||..|++|
T Consensus 51 ~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G 130 (568)
T 3p9d_H 51 RNKIIVNHLGKIIITNDAATMLRELDIVHPAVKVLVMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQG 130 (568)
T ss_dssp CEEEEECTTSCEEEESCHHHHTTTCCCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred CeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccC--CCCcHHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCC--CCCcccCccccee
Q 010272 81 YNKALEDAVAVLDKIAMPI--DTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLG--QGLREVDIKKYIK 156 (514)
Q Consensus 81 ~~~a~~~~l~~L~~~s~~v--~~~~~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~--~g~~~~d~~~~I~ 156 (514)
|++|++.++++|+++++++ +..+++.|.++++|+++||+.+++ ++|++|+++|+..++++.. .+...+|++ +|+
T Consensus 131 ~~~A~~~a~e~L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~-~~i~~livdAv~~V~~~~~~~~~~~~~dl~-~I~ 208 (568)
T 3p9d_H 131 YNMARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSKKYGSE-DILSELVSEAVSHVLPVAQQAGEIPYFNVD-SIR 208 (568)
T ss_dssp HHHHHHHHHHHHHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCH-HHHHHHHHHHHTTSCC---------CCCGG-GCE
T ss_pred HHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhccCcchH-HHHHHHHHHHHHHHhhccccccCCcccccc-eEE
Confidence 9999999999999999876 445688999999999999998877 9999999999999976310 122457875 699
Q ss_pred EEEecCCCCCCceeEeeEEEecccCCCCCCccccc---CCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHHHHH
Q 010272 157 VEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIV---NPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIE 233 (514)
Q Consensus 157 i~~i~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~---n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~~~~ 233 (514)
|++++|++++||++++|++|++++. .|+++++ ||||++++++|++++++.++++.+++.+++.++.++|+++++
T Consensus 209 I~k~~Ggs~~dS~lv~G~v~dk~~~---~m~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~ 285 (568)
T 3p9d_H 209 VVKIMGGSLSNSTVIKGMVFNREPE---GHVKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQID 285 (568)
T ss_dssp EEEEESSCGGGCEEESSCCBSSCBS---SGGGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHH
T ss_pred EEEccCCCcchheeeccEEEeeccc---CCcEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999984 6899999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEEC
Q 010272 234 NLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIG 313 (514)
Q Consensus 234 ~~v~~i~~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~~v~~~~ig 313 (514)
+++++|++.|+||||++++|++.+++||.++||++++++++.+|+|||++|||+++++++++++.++|+ |+.|++.++|
T Consensus 286 ~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~gI~av~~v~~~~leria~~tGa~ivs~l~~l~~~~LG~-a~~v~~~~ig 364 (568)
T 3p9d_H 286 AMMKEIADMGVECIVAGAGVGELALHYLNRYGILVLKVPSKFELRRLCRVCGATPLPRLGAPTPEELGL-VETVKTMEIG 364 (568)
T ss_dssp HHHHHHHHTTCCEEEECSCCCHHHHHHHHHHTCEEECCCCHHHHHHHHHHHSCCCCSSSSCCCGGGCEE-CSCCCCCEET
T ss_pred HHHHHHHhcCCeEEEECCCcChHHHHHHHHCCeEEEecCCHHHHHHHHHHhCCEEEeccccCCHHHCCc-ceEEEEEEec
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CeEEEEEEcCC--CCCeeEEEEccCCHhHHHHHHHHHHHHHHHHHHHhc--CCcEEeCCCHHHHHHHHHHHhhccCCCCc
Q 010272 314 DEFFAFIVDCK--DPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIK--NPKLVPGGGATELTVSATLKQKSSSIEGI 389 (514)
Q Consensus 314 ~~~~~~l~~~~--~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~--~g~vvpGGG~~E~~l~~~L~~~~~~~~~~ 389 (514)
+++|++|++|+ ++++|||+|||+|+.+++|.||+++||++++|++++ ++++|||||++|++|+.+|++++.+.+++
T Consensus 365 ~~~~~~~~g~~~l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~ 444 (568)
T 3p9d_H 365 GDRVTVFKQEQGEISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGL 444 (568)
T ss_dssp TEECBCCCCCSSSCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCST
T ss_pred CceEEEEecCCCCCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcH
Confidence 99999999998 799999999999999999999999999999999999 88899999999999999999999989999
Q ss_pred chHHHHHHHHhhhhhHHHHHHhcCCCHHHHHHHHHHHHhC-------CCCceEEEeCCCCc---cccccccccccchHHH
Q 010272 390 EKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHAN-------GENAWIGIDGNTGA---ISDMKERKIWDAYNVK 459 (514)
Q Consensus 390 ~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~-------~~~~~~G~d~~~~~---i~d~~~~gI~dp~~vk 459 (514)
+|+++++||+||+.||++||+|||+|+.+++.+|+..|.. +.++++|||+.+|+ +.||++.|||||+.||
T Consensus 445 eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk 524 (568)
T 3p9d_H 445 LQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREENIYDMLATK 524 (568)
T ss_dssp HHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcccCCCcccccChHHccCEEcHHHH
Confidence 9999999999999999999999999999999999998865 12368999999997 9999999999999999
Q ss_pred HHHHHHHHHHHHHHhchhhhhcCCccCC
Q 010272 460 AQTFKTAIEAACMLLRIDDIVSGIKKKQ 487 (514)
Q Consensus 460 ~~~l~~A~e~a~~iL~id~ii~~~~~~~ 487 (514)
+++|++|+|+|++|||||++|...|..+
T Consensus 525 ~~al~~A~e~a~~iL~iD~ii~~~~~~~ 552 (568)
T 3p9d_H 525 KFAINVATEAATTVLSIDQIIMAKKAGG 552 (568)
T ss_dssp HHHHHCCEECBCCC--------------
T ss_pred HHHHHHHHHHHHHHHhHHHHhhccccCC
Confidence 9999999999999999999998877655
No 20
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.4e-100 Score=812.21 Aligned_cols=471 Identities=29% Similarity=0.452 Sum_probs=449.7
Q ss_pred CceeeecCCCCEEEecCHHHHhhcccccChHHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Q 010272 1 MLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRA 80 (514)
Q Consensus 1 ~~Kmi~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~gi~p~~I~~g 80 (514)
|||||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||+++|+++||+++.+++++|+||..|++|
T Consensus 36 ~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G 115 (512)
T 3iyg_Q 36 MNKMVINHLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEG 115 (512)
T ss_pred CeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHHHhhhhhCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccc--cCCCCcHHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCCcccCcccceeEE
Q 010272 81 YNKALEDAVAVLDKIAM--PIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVE 158 (514)
Q Consensus 81 ~~~a~~~~l~~L~~~s~--~v~~~~~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~~~~d~~~~I~i~ 158 (514)
|++|++.++++|+++++ +.+..+++.|.++++|+++||+.+ ++++|++++++|+.+++++ ++ .+|++ +|+|.
T Consensus 116 ~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~-~~~~i~~livdAv~~V~~~--~~--~i~v~-~I~i~ 189 (512)
T 3iyg_Q 116 YEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYG-NEVFLAKLIAQACVSIFPD--SG--HFNVD-NIRVC 189 (512)
T ss_pred HHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCcc-chHHHHHHHHHHHHHHhcc--CC--cccHh-HeeEe
Confidence 99999999999999854 445557899999999999999865 6899999999999999863 22 46775 59999
Q ss_pred EecCCCCCCceeEeeEEEecccCCCCCCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHH
Q 010272 159 KVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQ 238 (514)
Q Consensus 159 ~i~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~~~~~~v~~ 238 (514)
+..|+++.+|++++|++|++++.+ |++.++||+|+++++++++.+++.+.++.+++++++.++.+.|++++++++++
T Consensus 190 k~~Ggs~~ds~lv~G~~~dk~~~~---~~~~~~n~kI~ll~~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~ 266 (512)
T 3iyg_Q 190 KILGSGVHSSSVLHGMVFKKETEG---DVTSVKDAKIAVYSCPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKA 266 (512)
T ss_pred eccCCCcccceEEeeEEEecCcCC---CCcccccCceEEEecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999864 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEE
Q 010272 239 ILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFA 318 (514)
Q Consensus 239 i~~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~ 318 (514)
|++.|++||+++++|++.+++||.++||++++++++.+|+|||++|||+++++++++++.++|+ |+.|++.++|+++|.
T Consensus 267 I~~~g~~vvi~~~~I~~la~~~l~k~~I~av~~~~~~dle~ia~~tGa~iis~l~~~~~~~LG~-a~~v~~~~~g~~~~~ 345 (512)
T 3iyg_Q 267 IADTGANVVVTGGRVADMALHYANKYNIMLVRLNSKWDLRRLCKTVGATALPRLNPPVLEEMGH-CDSVYLSEVGDTQVV 345 (512)
T ss_pred HHHhCCCEEEECCCccHHHHHHHHHCCeEEEEeCCHHHHHHHHHHhCCEEecccccCCHHHCCc-ccEEEEEEeCCeEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred EEEcCC-CCCeeEEEEccCCHhHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhccCCCCcchHHHHHH
Q 010272 319 FIVDCK-DPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAA 397 (514)
Q Consensus 319 ~l~~~~-~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~ 397 (514)
+|++|+ .+++|||+|||+|+.+++|.||+++||++++|+++++|++|||||++|++++.+|++++.+.++.+|+++++|
T Consensus 346 ~~~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~ 425 (512)
T 3iyg_Q 346 VFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKF 425 (512)
T ss_pred EEEcccCCCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 999996 5889999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred HHhhhhhHHHHHHhcCCCHHHHHHHHHHHHhCCCCceEEEeCCCC--ccccccccccccchHHHHHHHHHHHHHHHHHhc
Q 010272 398 AIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTG--AISDMKERKIWDAYNVKAQTFKTAIEAACMLLR 475 (514)
Q Consensus 398 a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~G~d~~~~--~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~ 475 (514)
++||+.||++||+|||+|+.+++.+|+..|..++ +++|||+.+| ++.||++.|||||+.||+++|++|+|+|++|||
T Consensus 426 a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d~~~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~ 504 (512)
T 3iyg_Q 426 AEAFEAIPRALAENSGVKANEVISKLYAVHQEGN-KNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLR 504 (512)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCC-CcEEEecCCCCCcccchHhccCeEcHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999998765 7899999965 999999999999999999999999999999999
Q ss_pred hhhhhcC
Q 010272 476 IDDIVSG 482 (514)
Q Consensus 476 id~ii~~ 482 (514)
||++|+.
T Consensus 505 id~ii~~ 511 (512)
T 3iyg_Q 505 VDQIIMA 511 (512)
T ss_pred HhHheec
Confidence 9999864
No 21
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=3e-102 Score=830.15 Aligned_cols=480 Identities=26% Similarity=0.483 Sum_probs=454.9
Q ss_pred CceeeecCCCCEEEecCHHHHhhcccccChHHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Q 010272 1 MLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRA 80 (514)
Q Consensus 1 ~~Kmi~~~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~gi~p~~I~~g 80 (514)
|||||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||+++|+++||+++.+++++|+||..|++|
T Consensus 42 ~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G 121 (546)
T 3p9d_F 42 TLKMLVDGAGNIKLTKDGKVLLTEMQIQSPTAVLIARAAAAQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDG 121 (546)
T ss_dssp CEEEEECTTSCEEEECCHHHHHHTSCCCCHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHH
T ss_pred CeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccCCC--CcHHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCCcccCcccceeEE
Q 010272 81 YNKALEDAVAVLDKIAMPIDT--NDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVE 158 (514)
Q Consensus 81 ~~~a~~~~l~~L~~~s~~v~~--~~~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~~~~d~~~~I~i~ 158 (514)
|++|++.++++|++++++++. .+++.|.++++|+++||+.+.+.+.|++++++|+..+... ++ .++|++ +|+|+
T Consensus 122 ~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~~~~d~la~l~vdaV~~V~~~--~~-~~~dl~-~I~i~ 197 (546)
T 3p9d_F 122 FEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDADLTEVLTPIVTDAVLSVYDA--QA-DNLDLH-MVEIM 197 (546)
T ss_dssp HHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHHHHCSSHHHHHHHHHHHTHHH--HH-TTCCGG-GEEEE
T ss_pred HHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhheEeecC--CC-Ccccch-heEEE
Confidence 999999999999999998864 4688999999999999999889999999999999998642 11 357775 69999
Q ss_pred EecCCCCCCceeEeeEEEecccCCCCCCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHH
Q 010272 159 KVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQ 238 (514)
Q Consensus 159 ~i~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~~~~~~v~~ 238 (514)
+++|+...||++++|++|++++.+| .|+++++||||++++|+|++++++.++++.+++++++..+++.|++++++.+++
T Consensus 198 ki~Gg~~~ds~lv~G~v~dk~~~~~-~m~~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~ 276 (546)
T 3p9d_F 198 QMQHLSPKDTTFIKGLVLDHGGRHP-DMPTRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKK 276 (546)
T ss_dssp CCCCSCTTTCCCCSSCEESCCCCSS-SSCSSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCccccEEEeeEEEecccccc-cCcceecCceEEEecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHcC----------CcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCccCCccceEE
Q 010272 239 ILKFK----------PDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFE 308 (514)
Q Consensus 239 i~~~~----------~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~~v~ 308 (514)
|+..+ ++||+++++|++.+++||.++||++++++++++|+|||++|||+++++++++++.++|+ |+.|+
T Consensus 277 I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI~~vr~v~~~~leria~~tGa~ii~~l~~l~~~~LG~-a~~v~ 355 (546)
T 3p9d_F 277 IIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNILALRRAKRRNMERLQLVTGGEAQNSVEDLSPQILGF-SGLVY 355 (546)
T ss_dssp HHHCC-----------CEEEESSCCCHHHHHHHTTTTCEEECCCCHHHHHHHHHTTTBCCCCCCSSCSTTCCBC-CCCBC
T ss_pred HHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCCeeEecCCHHHHHHHHHHhCCEEecchhhCCHhHCCc-ccEEE
Confidence 98754 34999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred EEEECCeEEEEEEcCCCCCeeEEEEccCCHhHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHh---hccC
Q 010272 309 VKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQ---KSSS 385 (514)
Q Consensus 309 ~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~---~~~~ 385 (514)
++++|+++|+||++|.++..|||+|||+|+.+++|.||+++||++++|+++++|++|||||++|++++.+|++ ++.+
T Consensus 356 ~~~ig~~~~~~i~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~ 435 (546)
T 3p9d_F 356 QETIGEEKFTYVTENTDPKSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLG 435 (546)
T ss_dssp BCCCSSCCCEECSSCSCCSCEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTT
T ss_pred EEEecCceEEEEecCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998 5888
Q ss_pred CCCcchHHHHHHHHhhhhhHHHHHHhcCCCHHHHHHHHHHHHhC-----CCCceEEEeCCCCccccccccccccchHHHH
Q 010272 386 IEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHAN-----GENAWIGIDGNTGAISDMKERKIWDAYNVKA 460 (514)
Q Consensus 386 ~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~-----~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~ 460 (514)
.++++|+++++|++||+.||++||+|||+|+.+++.+|+..|.. ++ .++|||+.+|++.||++.|||||+.||+
T Consensus 436 ~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~-~~~G~d~~~g~~~d~~~~gI~dp~~vk~ 514 (546)
T 3p9d_F 436 AKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDET-RYVGVDLNIGDSCDPTIEGIWDSYRVLR 514 (546)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTS-SCCCCBTTTTBCCCSGGGTCEEEHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCC-ceeeEeCCCCeecchHhccCEecHHHHH
Confidence 89999999999999999999999999999999999999998862 33 6799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhchhhhhcCCccCC
Q 010272 461 QTFKTAIEAACMLLRIDDIVSGIKKKQ 487 (514)
Q Consensus 461 ~~l~~A~e~a~~iL~id~ii~~~~~~~ 487 (514)
++|++|+|+|++|||||++|...+..+
T Consensus 515 ~al~~A~~~a~~iL~iD~ii~~~~~~~ 541 (546)
T 3p9d_F 515 NAITGATGIASNLLLCDELLRAGRSTL 541 (546)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEECCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcccC
Confidence 999999999999999999998754433
No 22
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=2.2e-102 Score=828.61 Aligned_cols=475 Identities=31% Similarity=0.480 Sum_probs=450.8
Q ss_pred Cceeeec-CCCCEEEecCHHHHhhcccccChHHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhc-CCChhhHH
Q 010272 1 MLKMLLD-ASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDK-NYHPTVIC 78 (514)
Q Consensus 1 ~~Kmi~~-~~g~~~iTnDG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~-gi~p~~I~ 78 (514)
|||||++ +.|+++|||||+|||++|+++||+|||++++|++|++++||||||+++|+++||+++.+++.+ |+||..|+
T Consensus 42 ~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~Akll~e~a~~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~ 121 (527)
T 3p9d_B 42 MDKLLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTII 121 (527)
T ss_dssp CEEEEECTTTCCEECCCCHHHHHHTCCCCCHHHHHHHHHHHHHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHH
T ss_pred CeEEEEecCCCCeEEeCCHHHHHHHhccCCHHHHHHHHHHHHhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 7999999 899999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCc---HHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCCcccCcccce
Q 010272 79 RAYNKALEDAVAVLDKIAMPIDTND---RATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYI 155 (514)
Q Consensus 79 ~g~~~a~~~~l~~L~~~s~~v~~~~---~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~~~~d~~~~I 155 (514)
+||++|++.++++|++++++++..+ ++.|.++++|+++||+.++|+++|++|+++|+.+++++ + |+. +|
T Consensus 122 ~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK~~~~~~~~i~~li~dAv~~V~~~---~----~~~-~I 193 (527)
T 3p9d_B 122 EGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRLKGS---T----NLE-HI 193 (527)
T ss_dssp HHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHTTCTT---C----CTT-SS
T ss_pred HHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHhccc---C----Ccc-eE
Confidence 9999999999999999999987533 78999999999999999999999999999999999852 2 232 59
Q ss_pred eEEEecCCCCCCceeEeeEEEecccCCCCCCcccccCCeEEEEeccCcccccc-ccceEEecCHHHHHHHHHHHHHHHHH
Q 010272 156 KVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGE-NQTNAELVKEEDWEVLLKMEEEYIEN 234 (514)
Q Consensus 156 ~i~~i~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~~~-~~~~~~i~~~~~l~~~~~~E~~~~~~ 234 (514)
+|+++.|+...||++++|++|++++.++ . |++++||||++++++|++++++ ++.++.+++++++..+.+.|+++++.
T Consensus 194 ~V~k~~gg~~~ds~lv~G~~~dk~~~~~-~-p~~~~n~kIlll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~ 271 (527)
T 3p9d_B 194 QIIKILGGKLSDSFLDEGFILAKKFGNN-Q-PKRIENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKN 271 (527)
T ss_dssp CCCBCCCSSSSCCCEESSCCCSCCCSSS-C-CSCCSSCEEEEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCccccEEEEeEEEecccCCC-C-CeeeecceEEEeccccccccccccCceEEEcCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999997 4 8899999999999999999998 68888899999999999999999999
Q ss_pred HHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECC
Q 010272 235 LCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGD 314 (514)
Q Consensus 235 ~v~~i~~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~~v~~~~ig~ 314 (514)
++++|++.|++||+++++|++.+++||.++||++++++++.+|+|++++|||+++++++++++.++|+ |+.|+++++|+
T Consensus 272 ~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~i~av~~~~~~dle~ia~~tGa~iv~~~~~~~~~~LG~-a~~v~~~~ig~ 350 (527)
T 3p9d_B 272 KIAKISKFGINTFINRQLIYDYPEQLFTDLGINSIEHADFEGVERLALVTGGEVVSTFDEPSKCKLGE-CDVIEEIMLGE 350 (527)
T ss_dssp HHHHHTTTCCBEEESSCCCTTTHHHHHHHTCBCCCCCCHHHHHHHHHHHTCCCCCSTTSCCTTSCEEC-SBCCBCCCSSS
T ss_pred HHHHHHhcCCCEEEECCCCCHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCEEecchhhCCHHHCCC-CcEEEEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred eEEEEEEcCCCCCeeEEEEccCCHhHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhccCCCCcchHHH
Q 010272 315 EFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPY 394 (514)
Q Consensus 315 ~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~ 394 (514)
++|++|++|+++++|||+|||+|+.+++|.||+++||++++|+++++|++|||||++|++++.+|++++.+.++++|+++
T Consensus 351 ~~~~~~~g~~~~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i 430 (527)
T 3p9d_B 351 QPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAV 430 (527)
T ss_dssp CCBCCBCSSCCSCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHHCSHHHHHH
T ss_pred eEEEEEECCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhccCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888889999999
Q ss_pred HHHHHhhhhhHHHHHHhcCCCHHHHHHHHHHHHhCCCCceEEEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHh
Q 010272 395 EAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLL 474 (514)
Q Consensus 395 ~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL 474 (514)
++|++||+.||++||+|||+|+.+++.+|++.|..++ +++|||+.+|++.||++.|||||+.||+++|++|+|+|++||
T Consensus 431 ~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~-~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL 509 (527)
T 3p9d_B 431 EAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGI-STSGLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEVLL 509 (527)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTC-SCCCCCSSSTTCCCHHHHTCEEETTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCC-CceeEECCCCCCcchHhccCEEcHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999987665 689999999999999999999999999999999999999999
Q ss_pred chhhhhcCCccCC
Q 010272 475 RIDDIVSGIKKKQ 487 (514)
Q Consensus 475 ~id~ii~~~~~~~ 487 (514)
|||++|...|+++
T Consensus 510 ~id~ii~~~~~~~ 522 (527)
T 3p9d_B 510 RVDNIIRARPRTA 522 (527)
T ss_dssp HCCEEEEEC----
T ss_pred hHHHHHhcCCccc
Confidence 9999999877665
No 23
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=1.6e-88 Score=720.67 Aligned_cols=433 Identities=22% Similarity=0.339 Sum_probs=398.3
Q ss_pred CceeeecCCCCEEEecCHHHHhhcccccCh----HHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhh
Q 010272 1 MLKMLLDASGGIVVTNDGNAILRELDVAHP----AAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTV 76 (514)
Q Consensus 1 ~~Kmi~~~~g~~~iTnDG~tIl~~l~~~hP----~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~gi~p~~ 76 (514)
|||||+++.|+++|||||+|||++|+++|| +|||++++|++|++++||||||+++|+++||+++.+++++|+||..
T Consensus 35 ~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~ 114 (543)
T 1we3_A 35 RNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLA 114 (543)
T ss_dssp CEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred CeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhhheecCCCcchHHHHHHHHHHHHHHHHHCCCCHHH
Confidence 799999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCCcccCccccee
Q 010272 77 ICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIK 156 (514)
Q Consensus 77 I~~g~~~a~~~~l~~L~~~s~~v~~~~~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~~~~d~~~~I~ 156 (514)
|++||++|++.++++|+++++|++ +++.|.+++++++ + ++++++++++|+.++++ +|. |+
T Consensus 115 I~~G~~~A~~~a~~~L~~~s~~v~--~~~~l~~vA~iS~------~-~~~i~~li~dAv~~V~~---~g~--------I~ 174 (543)
T 1we3_A 115 LKRGIEKAVEAAVEKIKALAIPVE--DRKAIEEVATISA------N-DPEVGKLIADAMEKVGK---EGI--------IT 174 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHTCBCCC--SHHHHHHHHHHHH------T-CHHHHHHHHHHHHTTCT---TSE--------EE
T ss_pred HHHHHHHHHHHHHHHHHHhcccCC--CHHHHHHhhhhhc------C-CHHHHHHHHHHHHHhCc---CCc--------EE
Confidence 999999999999999999999986 5889999999875 2 68899999999999975 343 77
Q ss_pred EEEecCCCCCCc-eeEeeEEEecccCCC------CCCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHH
Q 010272 157 VEKVPGGQLEDS-RVLKGVMFNKDVVAP------GKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEE 229 (514)
Q Consensus 157 i~~i~G~~~~ds-~li~Giv~~~~~~~~------~~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~ 229 (514)
|+ .|+++++| ++++|++|+++|.+| .+|++.++||||++++++++ +.+++.
T Consensus 175 Ve--~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is-------------~~~~l~------- 232 (543)
T 1we3_A 175 VE--ESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVS-------------NVRELL------- 232 (543)
T ss_dssp EE--ECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBC-------------CHHHHH-------
T ss_pred Ee--cCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCcC-------------CHHHHH-------
Confidence 75 79999998 999999999999885 25788899999999999743 455543
Q ss_pred HHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHc------CCeEEe-----cCChhHHHHHHHHhCCeeccC-----CC
Q 010272 230 EYIENLCMQILKFKPDLVITEKGLSDLACHYLSKA------GVSAIR-----RLRKTDNNRIAKACGAVIVNR-----PD 293 (514)
Q Consensus 230 ~~~~~~v~~i~~~~~~lVi~~~~i~~~al~~l~~~------~I~~v~-----~v~~~~l~~i~~~tGa~ii~~-----~~ 293 (514)
.+++++.+.|++|||++++|++.+++||..| +|++++ ++++++|+||+++|||+++++ ++
T Consensus 233 ----~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~ 308 (543)
T 1we3_A 233 ----PILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLE 308 (543)
T ss_dssp ----HHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGG
T ss_pred ----HHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcc
Confidence 4778899999999999999999999999986 456665 888999999999999999996 89
Q ss_pred CCCCCccCCccceEEEEEECCeEEEEEEcCCCC-----------------------------------CeeEEEEccCCH
Q 010272 294 ELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDP-----------------------------------KACTVLLRGASK 338 (514)
Q Consensus 294 ~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~-----------------------------------~~~TIll~G~t~ 338 (514)
++++.++|+ |+.|++ +++++++|++|.++ ++|||+|||+|+
T Consensus 309 ~~~~~~LG~-a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te 384 (543)
T 1we3_A 309 NATLSMLGR-AERVRI---TKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATE 384 (543)
T ss_dssp GCCGGGCEE-EEEEEE---CSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSH
T ss_pred cCCHHHCCC-ceEEEE---EcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCH
Confidence 999999999 998876 46899999998753 789999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhccCCCCcchHHHHHHHHhhhhhHHHHHHhcCCCHHH
Q 010272 339 DLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIR 418 (514)
Q Consensus 339 ~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~ 418 (514)
.+++|.||+++||++++|+++++| +|||||++|++++.+|++++.+.++++|+++++|++||+.||++||+|||+|+.+
T Consensus 385 ~~l~E~~r~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~ 463 (543)
T 1we3_A 385 TELKEKKHRFEDALNATRAAVEEG-IVPGGGVTLLRAISAVEELIKKLEGDEATGAKIVRRALEEPARQIAENAGYEGSV 463 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccC-cCCCccHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Confidence 999999999999999999999999 9999999999999999999887888999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCceEEEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHhchhhhhcCCccCC
Q 010272 419 TMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQ 487 (514)
Q Consensus 419 ~~~~l~~~~~~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~~~~~~ 487 (514)
++.+|+..|. +.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||+|++|...|+++
T Consensus 464 vv~~l~~~h~---~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~ 529 (543)
T 1we3_A 464 IVQQILAETK---NPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVAEKPEKK 529 (543)
T ss_dssp HHHHHHHCCS---CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECSCC-
T ss_pred HHHHHHHhcC---CCCEEEeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccC
Confidence 9999998773 26799999999999999999999999999999999999999999999998877543
No 24
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=2.3e-88 Score=718.10 Aligned_cols=431 Identities=21% Similarity=0.319 Sum_probs=396.3
Q ss_pred CceeeecCCCCEEEecCHHHHhhcccccCh----HHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhh
Q 010272 1 MLKMLLDASGGIVVTNDGNAILRELDVAHP----AAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTV 76 (514)
Q Consensus 1 ~~Kmi~~~~g~~~iTnDG~tIl~~l~~~hP----~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~gi~p~~ 76 (514)
|||||+++.|+++|||||+||+|+|+++|| +|||++++|++|++++||||||+++|+++||+++.+++++|+||..
T Consensus 35 ~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~ 114 (547)
T 1kp8_A 35 RNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMD 114 (547)
T ss_dssp CEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred CeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHH
Confidence 799999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCCcccCccccee
Q 010272 77 ICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIK 156 (514)
Q Consensus 77 I~~g~~~a~~~~l~~L~~~s~~v~~~~~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~~~~d~~~~I~ 156 (514)
|++||++|++.++++|+++++|++ +++.|.+++++++ ++++++++++++|+.++++ +|. |+
T Consensus 115 I~~G~~~A~~~a~~~L~~~s~~v~--~~e~l~~vA~iS~------~~~~~i~~liadAv~~V~~---dg~--------I~ 175 (547)
T 1kp8_A 115 LKRGIDKAVTVAVEELKALSVPCS--DSKAIAQVGTISA------NSDETVGKLIAEAMDKVGK---EGV--------IT 175 (547)
T ss_dssp HHHHHHHHHHHHHHHHHHHCBCCC--SHHHHHHHHHHHT------TSCHHHHHHHHHHHHHHCT---TSE--------EE
T ss_pred HHHHHHHHHHHHHHHHHHhCcCCC--CHHHHHHHHHHhc------cchhHHHHHHHHHHHHhCc---CCc--------EE
Confidence 999999999999999999999986 5889999999874 4688999999999999975 343 77
Q ss_pred EEEecCCCCCCc-eeEeeEEEecccCCCC------CCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHH
Q 010272 157 VEKVPGGQLEDS-RVLKGVMFNKDVVAPG------KMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEE 229 (514)
Q Consensus 157 i~~i~G~~~~ds-~li~Giv~~~~~~~~~------~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~ 229 (514)
|+ .|+++++| ++++|++|+++|.+|. +|++.++||||++++++|+ +.+++.
T Consensus 176 Ve--~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is-------------~~~~l~------- 233 (547)
T 1kp8_A 176 VE--DGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKIS-------------NIREML------- 233 (547)
T ss_dssp EE--CCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEEC-------------CGGGTH-------
T ss_pred EE--eCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcCC-------------CHHHHH-------
Confidence 75 79999999 9999999999998862 4788899999999999744 445544
Q ss_pred HHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCC------eEEe-----cCChhHHHHHHHHhCCeeccC-----CC
Q 010272 230 EYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGV------SAIR-----RLRKTDNNRIAKACGAVIVNR-----PD 293 (514)
Q Consensus 230 ~~~~~~v~~i~~~~~~lVi~~~~i~~~al~~l~~~~I------~~v~-----~v~~~~l~~i~~~tGa~ii~~-----~~ 293 (514)
.+++++.+.|++|||++++|++.|++||..|+| ++++ ++++++|+||+++|||+++++ ++
T Consensus 234 ----~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~ 309 (547)
T 1kp8_A 234 ----PVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELE 309 (547)
T ss_dssp ----HHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCST
T ss_pred ----HHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcc
Confidence 467889999999999999999999999999754 5555 899999999999999999995 99
Q ss_pred CCCCCccCCccceEEEEEECCeEEEEEEcCCCC-----------------------------------CeeEEEEccCCH
Q 010272 294 ELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDP-----------------------------------KACTVLLRGASK 338 (514)
Q Consensus 294 ~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~-----------------------------------~~~TIll~G~t~ 338 (514)
++++.++|+ |+.|++ +++++++|++|.++ ++|||+|||+|+
T Consensus 310 ~~~~~~LG~-a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te 385 (547)
T 1kp8_A 310 KATLEDLGQ-AKRVVI---NKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATE 385 (547)
T ss_dssp TCCTTTSEE-EEEEEE---CSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSH
T ss_pred cCCHHHCCc-eeEEEE---ccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcH
Confidence 999999999 999876 46899999999754 789999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhccCCCCcchHHHHHHHHhhhhhHHHHHHhcCCCHHH
Q 010272 339 DLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIR 418 (514)
Q Consensus 339 ~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~ 418 (514)
.+++|.||+++||++++|+++++| +|||||++|++++.+|++++. .++++|+++++|++||+.||++|++|||+|+.+
T Consensus 386 ~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g~~q~~i~~~a~ALe~ip~~la~NaG~d~~~ 463 (547)
T 1kp8_A 386 VEMKEKKARVEDALHATRAAVEEG-VVAGGGVALIRVASKLADLRG-QNADQNVGIKVALRAMEAPLRQIVLNCGEEPSV 463 (547)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHTTTCCC-SSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhccCC-EEeCCcHHHHHHHHHHHHHhc-cCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 999999999999999999999999 999999999999999998876 778999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCceEEEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHhchhhhhcCCccCC
Q 010272 419 TMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQ 487 (514)
Q Consensus 419 ~~~~l~~~~~~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~~~~~~ 487 (514)
++.+|+.. +.++|||+.+|++.||++.|||||+.||+++|++|+|+|++||++|++|...|++.
T Consensus 464 vv~~l~~~-----~~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~ 527 (547)
T 1kp8_A 464 VANTVKGG-----DGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKND 527 (547)
T ss_dssp HHHHHHHS-----CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCC--
T ss_pred HHHHHHhc-----CCCEeEeCCCCccccchhcCceechHhHHHHHHHHHHHHHHHHhHhheeecCCccC
Confidence 99999853 26799999999999999999999999999999999999999999999999877654
No 25
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=7.1e-89 Score=722.69 Aligned_cols=432 Identities=19% Similarity=0.285 Sum_probs=367.4
Q ss_pred CceeeecCCCCEEEecCHHHHhhcccccCh----HHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhh
Q 010272 1 MLKMLLDASGGIVVTNDGNAILRELDVAHP----AAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTV 76 (514)
Q Consensus 1 ~~Kmi~~~~g~~~iTnDG~tIl~~l~~~hP----~a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~gi~p~~ 76 (514)
|||||+++.|+++|||||+||||+|+++|| +|||++++|++|++++||||||+++|+++||+++.+++.+|+||..
T Consensus 36 ~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~ 115 (545)
T 1iok_A 36 RNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMD 115 (545)
T ss_dssp CEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHGGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred CeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhhccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHH
Confidence 799999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCCcccCccccee
Q 010272 77 ICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIK 156 (514)
Q Consensus 77 I~~g~~~a~~~~l~~L~~~s~~v~~~~~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~~~~d~~~~I~ 156 (514)
|++||++|++.++++|+++++|++ +++.|.+++++++ ++++++++++++|+.++++ +|. |+
T Consensus 116 I~~G~~~A~~~a~~~L~~~s~~v~--~~e~l~~va~iS~------~~~~~i~~li~dAv~~V~~---~g~--------I~ 176 (545)
T 1iok_A 116 LKRGIDVATAKVVEAIKSAARPVN--DSSEVAQVGTISA------NGESFIGQQIAEAMQRVGN---EGV--------IT 176 (545)
T ss_dssp HHHHHHHHHHHHHHHHHTTCBCCC--STTTTTHHHHHTT------TTCHHHHHHHHHHHHHHCT---TSC--------CC
T ss_pred HHHHHHHHHHHHHHHHHHhcccCC--CHHHHHHHHHhhc------CCchhHHHHHHHHHHHhcc---CCe--------EE
Confidence 999999999999999999999986 4678999998874 4688999999999999975 343 66
Q ss_pred EEEecCCCCCCc-eeEeeEEEecccCCC------CCCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHH
Q 010272 157 VEKVPGGQLEDS-RVLKGVMFNKDVVAP------GKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEE 229 (514)
Q Consensus 157 i~~i~G~~~~ds-~li~Giv~~~~~~~~------~~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~ 229 (514)
|+ .|+++++| ++++|++|+++|.+| ..|++.++||||++++++|+. .+++.
T Consensus 177 Ve--~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~-------------~~~l~------- 234 (545)
T 1iok_A 177 VE--ENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSS-------------LQPMV------- 234 (545)
T ss_dssp CE--ECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCC-------------CCC---------
T ss_pred EE--eCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcCC-------------HHHHH-------
Confidence 75 79999999 999999999999885 257888999999999998652 33433
Q ss_pred HHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCC------eEEe-----cCChhHHHHHHHHhCCeeccC-----CC
Q 010272 230 EYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGV------SAIR-----RLRKTDNNRIAKACGAVIVNR-----PD 293 (514)
Q Consensus 230 ~~~~~~v~~i~~~~~~lVi~~~~i~~~al~~l~~~~I------~~v~-----~v~~~~l~~i~~~tGa~ii~~-----~~ 293 (514)
.+++++.+.|++|||++++|++.|++||..|+| ++++ ++++++|+|||++|||+++++ ++
T Consensus 235 ----~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~ 310 (545)
T 1iok_A 235 ----PLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLE 310 (545)
T ss_dssp -------------CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC------------
T ss_pred ----HHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcc
Confidence 467889999999999999999999999999754 5555 999999999999999999996 99
Q ss_pred CCCCCccCCccceEEEEEECCeEEEEEEcCCCC-----------------------------------CeeEEEEccCCH
Q 010272 294 ELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDP-----------------------------------KACTVLLRGASK 338 (514)
Q Consensus 294 ~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~-----------------------------------~~~TIll~G~t~ 338 (514)
++++.++|+ |+.|++ ++++|++|++|.++ ++|||+|||+|+
T Consensus 311 ~~~~~~LG~-a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te 386 (545)
T 1iok_A 311 NVTIDMLGR-AKKVSI---NKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTE 386 (545)
T ss_dssp ---CTTSEE-EEEEEE---CSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSH
T ss_pred cCCHHHcCc-CcEEEE---ecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCH
Confidence 999999999 999976 46899999998753 789999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhccCCCCcchHHHHHHHHhhhhhHHHHHHhcCCCHHH
Q 010272 339 DLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIR 418 (514)
Q Consensus 339 ~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~ 418 (514)
.+++|.||+++||++++|+++++| +|||||++|++++.+|++++. .++++|+++++|++||+.||++||+|||+|+.+
T Consensus 387 ~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~ 464 (545)
T 1iok_A 387 IEVKERKDRVDDALNATRAAVQEG-IVVGGGVALVQGAKVLEGLSG-ANSDQDAGIAIIRRALEAPMRQIAENAGVDGAV 464 (545)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHGGGGGSCCC-SSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcC-CCCCchHHHHHHHHHHHHHhc-cCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 999999999999999999999999 999999999999999998876 778999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCceEEEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHhchhhhhcCCccCC
Q 010272 419 TMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQ 487 (514)
Q Consensus 419 ~~~~l~~~~~~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~~~~~~ 487 (514)
++.+|+..| ++++|||+.+|++.||++.|||||+.||+++|++|+|+|++||++|++|...|++.
T Consensus 465 vv~~l~~~~----~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~ 529 (545)
T 1iok_A 465 VAGKVRESS----DKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKPEPK 529 (545)
T ss_dssp HHHHHHSCC----STTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECC---
T ss_pred HHHHHHhhc----CCCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhHHHhhccCCccC
Confidence 999998665 36799999999999999999999999999999999999999999999999877654
No 26
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=8.6e-88 Score=711.72 Aligned_cols=431 Identities=22% Similarity=0.292 Sum_probs=351.0
Q ss_pred CceeeecCCCCEEEecCHHHHhhcccccChH----HHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhh
Q 010272 1 MLKMLLDASGGIVVTNDGNAILRELDVAHPA----AKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTV 76 (514)
Q Consensus 1 ~~Kmi~~~~g~~~iTnDG~tIl~~l~~~hP~----a~ll~~~~~~~~~~~GDGTtt~viL~~~Ll~~~~~li~~gi~p~~ 76 (514)
|||||+++.|+++|||||+|||++|+++||+ |||++++|++|++++||||||+++|+++||+++.+++++|+||..
T Consensus 35 ~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~qd~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~ 114 (546)
T 3rtk_A 35 RNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLG 114 (546)
T ss_dssp --------------------------CCCHHHHHHHHHHHHHHTSCC-------CHHHHHHHHHHHHHHHHHTTTCCHHH
T ss_pred CeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhhhhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHH
Confidence 7999999999999999999999999999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhcccccchhHHHHHHHHHHhhhccccCCCCCcccCccccee
Q 010272 77 ICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIK 156 (514)
Q Consensus 77 I~~g~~~a~~~~l~~L~~~s~~v~~~~~~~l~~v~~t~l~sk~~~~~~~~l~~li~~a~~~v~~~~~~g~~~~d~~~~I~ 156 (514)
|++||++|++.++++|+++++|++ +++.|.++++++++ ++++++++++|+.+++. +|. |+
T Consensus 115 I~~G~~~A~~~a~e~L~~~s~~v~--~~e~L~~vA~iS~~-------~~~i~~liadAv~~V~~---dgv--------I~ 174 (546)
T 3rtk_A 115 LKRGIEKAVEKVTETLLKGAKEVE--TKEQIAATAAISAG-------DQSIGDLIAEAMDKVGN---EGV--------IT 174 (546)
T ss_dssp HHHHHHHHHHHHHHHHHHTCBCCC--SHHHHHHHHHHHHT-------CHHHHHHHHHHHHHSCT---TSE--------EE
T ss_pred HHHHHHHHHHHHHHHHHHhcccCC--ChHHHHhHeEEeCC-------chHHHHHHHHHHHHhcc---CCc--------eE
Confidence 999999999999999999999987 58899999998752 67899999999999975 343 88
Q ss_pred EEEecCCCCCCceeEeeEEEecccCCC------CCCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHH
Q 010272 157 VEKVPGGQLEDSRVLKGVMFNKDVVAP------GKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEE 230 (514)
Q Consensus 157 i~~i~G~~~~ds~li~Giv~~~~~~~~------~~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~ 230 (514)
|++.. +...+|++++|++|++++.+| .+|++.++||||+++++++ ++.+++.+
T Consensus 175 Ve~~~-~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kI-------------s~~~~l~~------- 233 (546)
T 3rtk_A 175 VEESN-TFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKV-------------STVKDLLP------- 233 (546)
T ss_dssp EECCS-SSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEE-------------CCSTTTHH-------
T ss_pred EEecC-CcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCcc-------------CCHHHHHH-------
Confidence 87644 345799999999999999886 3688999999999999964 44455443
Q ss_pred HHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcC------CeEE-----ecCChhHHHHHHHHhCCeecc-----CCCC
Q 010272 231 YIENLCMQILKFKPDLVITEKGLSDLACHYLSKAG------VSAI-----RRLRKTDNNRIAKACGAVIVN-----RPDE 294 (514)
Q Consensus 231 ~~~~~v~~i~~~~~~lVi~~~~i~~~al~~l~~~~------I~~v-----~~v~~~~l~~i~~~tGa~ii~-----~~~~ 294 (514)
+++++.+.|+||||++++|++++++||..|+ +.++ ++.++.+|+||+++|||++++ ++++
T Consensus 234 ----~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~ 309 (546)
T 3rtk_A 234 ----LLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLEN 309 (546)
T ss_dssp ----HHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTT
T ss_pred ----HHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCcccc
Confidence 6789999999999999999999999999764 3454 355689999999999999999 6899
Q ss_pred CCCCccCCccceEEEEEECCeEEEEEEcCCCC-----------------------------------CeeEEEEccCCHh
Q 010272 295 LQESDVGTGAGLFEVKKIGDEFFAFIVDCKDP-----------------------------------KACTVLLRGASKD 339 (514)
Q Consensus 295 l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~-----------------------------------~~~TIll~G~t~~ 339 (514)
+++.++|+ |+.|+ ++++++++|++|.++ ++|||+|||+|+.
T Consensus 310 ~~~~~LG~-a~~v~---i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~ 385 (546)
T 3rtk_A 310 ADLSLLGK-ARKVV---VTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEV 385 (546)
T ss_dssp CCTTTSEE-EEEEE---ECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSST
T ss_pred CCHhhCCe-eEEEE---EcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHH
Confidence 99999999 99887 578999999998753 4899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhccCCCCcchHHHHHHHHhhhhhHHHHHHhcCCCHHHH
Q 010272 340 LLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRT 419 (514)
Q Consensus 340 ~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~ 419 (514)
+++|.||+++||++++|+++++| +|||||++|++++.+|++++ .++++|+++++|++||+.||++||+|||+|+.++
T Consensus 386 ~l~E~er~l~DAl~a~r~av~~g-iVpGGGa~e~~~s~~L~~~~--~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~v 462 (546)
T 3rtk_A 386 ELKERKHRIEDAVRNAKAAVEEG-IVAGGGVTLLQAAPTLDELK--LEGDEATGANIVKVALEAPLKQIAFNSGLEPGVV 462 (546)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHTTGGGSTTSC--CCTTHHHHHHHHHHHTTHHHHHHHTTTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-cccCCcHHHHHHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 99999999999999999999999 99999999999999999887 7899999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCceEEEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHhchhhhhcCCccCCC
Q 010272 420 MTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQA 488 (514)
Q Consensus 420 ~~~l~~~~~~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~~~~~~~ 488 (514)
+.+|+..+ ..+|||+.+|++.||++.|||||+.||+++|++|+|+|++|||+|++|...|.+++
T Consensus 463 v~~l~~~~-----~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~id~iI~~~~~~~~ 526 (546)
T 3rtk_A 463 AEKVRNLP-----AGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAVVADKPEKEK 526 (546)
T ss_dssp HHHHHHSC-----TTEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHCC-----------
T ss_pred HHHHHhhc-----CCEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 99998642 34899999999999999999999999999999999999999999999998877653
No 27
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=100.00 E-value=5.3e-37 Score=279.81 Aligned_cols=174 Identities=71% Similarity=1.154 Sum_probs=151.6
Q ss_pred CCCceeEeeEEEecccCCCCCCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 010272 165 LEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKP 244 (514)
Q Consensus 165 ~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~~~~~~v~~i~~~~~ 244 (514)
++||++++|++|++++.++ +||++++||||++++++|++++++.+.++.+++++++..+++.|++++++++++|++.|+
T Consensus 1 ~~dS~lv~Gvvl~k~~~~~-~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 79 (178)
T 1gml_A 1 MEDSCVLRGVMINKDVTHP-RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKP 79 (178)
T ss_dssp --CCSEEEEEEESCCCSST-TSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCcEEEEEEEEeccccCC-CCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 3689999999999999998 899999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEEEcCC
Q 010272 245 DLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCK 324 (514)
Q Consensus 245 ~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~ 324 (514)
|||+++++|++.|++||.++||++++++++++|+|||++|||+++++++++++..+|+.|+.|+++++|+++|++|++|+
T Consensus 80 nVVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~~v~~~~ig~~~~~~~~gc~ 159 (178)
T 1gml_A 80 DVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCK 159 (178)
T ss_dssp SEEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGGGCCGGGSBCCEEEEEEEEETTEEEEEEEEES
T ss_pred cEEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCeEeCChhhCChhhhCCcccEEEEEEECCeEEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999977999999999999999999999
Q ss_pred CCCeeEEEEccCCHh
Q 010272 325 DPKACTVLLRGASKD 339 (514)
Q Consensus 325 ~~~~~TIll~G~t~~ 339 (514)
+++.|||+|||++.+
T Consensus 160 ~~~~~TIllRG~~~~ 174 (178)
T 1gml_A 160 DPKACTILLRGASHH 174 (178)
T ss_dssp STTSCEEEEEC----
T ss_pred CCCEEEEEEECCCcc
Confidence 999999999999875
No 28
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.98 E-value=3e-32 Score=243.36 Aligned_cols=154 Identities=35% Similarity=0.590 Sum_probs=149.0
Q ss_pred EeeEEEecccCCCCCCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeC
Q 010272 171 LKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITE 250 (514)
Q Consensus 171 i~Giv~~~~~~~~~~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~~~~~~v~~i~~~~~~lVi~~ 250 (514)
++|++|++++.++ +||+.++||||++++++|++++++.++++.+++++++..+++.|++++++++++|+++|+|||+++
T Consensus 1 i~Gvv~~k~~~~~-~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~ 79 (159)
T 1ass_A 1 MSGIVIDKEKVHS-KMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQ 79 (159)
T ss_dssp CCCEEESCCCSCT-TSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEES
T ss_pred CceEEEecccCCC-CCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEEC
Confidence 4799999999998 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCccCCccceEEEEEECCeEEEEEEcCCCC
Q 010272 251 KGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDP 326 (514)
Q Consensus 251 ~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~ 326 (514)
++|++.|++||.++||++++++++++|+|||++|||+++++++++++..+|+ |+.|+++++|+++|++|++|++.
T Consensus 80 k~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~iv~~~~~l~~~~LG~-~~~v~e~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 80 KGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGE-AETVEERKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp SCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTTSCCTTSCEE-EEEEEEEEETTEEEEEEESCC--
T ss_pred CccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCeeeCccccCCcccCcc-ceEEEEEEECCeEEEEEECCCCc
Confidence 9999999999999999999999999999999999999999999999999999 99999999999999999999754
No 29
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=99.30 E-value=5e-12 Score=112.63 Aligned_cols=145 Identities=19% Similarity=0.225 Sum_probs=110.4
Q ss_pred ceeEeeEEEecccCCC------CCCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHH
Q 010272 168 SRVLKGVMFNKDVVAP------GKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILK 241 (514)
Q Consensus 168 s~li~Giv~~~~~~~~------~~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~~~~~~v~~i~~ 241 (514)
.++++||.|+++|.+| .+|...++||+||+++.+ +++..++.+ +++.+.+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkK-------------Is~i~~ilP-----------~LE~~~~ 57 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDK-------------ISSLPDLLP-----------LLEKVAG 57 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSE-------------ECCHHHHHH-----------HHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCc-------------cCCHHHHHH-----------HHHHHHH
Confidence 4678999999999876 367889999999999988 456677777 5588888
Q ss_pred cCCcEEEeCCCCCHHHHHHHHHc------CCeEE-----ecCChhHHHHHHHHhCCeecc-----CCCCCCCCccCCccc
Q 010272 242 FKPDLVITEKGLSDLACHYLSKA------GVSAI-----RRLRKTDNNRIAKACGAVIVN-----RPDELQESDVGTGAG 305 (514)
Q Consensus 242 ~~~~lVi~~~~i~~~al~~l~~~------~I~~v-----~~v~~~~l~~i~~~tGa~ii~-----~~~~l~~~~lG~~~~ 305 (514)
.+.+|+|++.+|+.+|+..|.-| ++.++ +.-++..|++||.+||+++++ ++++.+..++|+ |+
T Consensus 58 ~~kpLlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~-a~ 136 (194)
T 3m6c_A 58 TGKPLLIVAEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGS-AR 136 (194)
T ss_dssp HTCCEEEEESEECHHHHHHHHHHHHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEE-EE
T ss_pred hCCCeEEEecccccchhhhhhhhhccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCC-cc
Confidence 89999999999999999988776 23344 455678999999999999987 567778888998 87
Q ss_pred eEEEEEECCeEEEEEEcCCCCCeeEEEE-ccCCHhHHHHHHHHHHHHHH
Q 010272 306 LFEVKKIGDEFFAFIVDCKDPKACTVLL-RGASKDLLNEVERNLQDAMS 353 (514)
Q Consensus 306 ~v~~~~ig~~~~~~l~~~~~~~~~TIll-~G~t~~~l~e~~~~i~dal~ 353 (514)
++...+ .. |.++ ++.+...++.+...++.-+.
T Consensus 137 ~v~vtk---------------d~-T~iv~G~g~~~~I~~Rv~qIr~~ie 169 (194)
T 3m6c_A 137 RVVVSK---------------DD-TVIVDGGGTAEAVANRAKHLRAEID 169 (194)
T ss_dssp EEEECS---------------SC-EEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred EEEEcC---------------Cc-eEEecCCCCHHHHHHHHHHHHHHHH
Confidence 665322 22 4445 44566666666666555543
No 30
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=99.23 E-value=2.8e-11 Score=108.04 Aligned_cols=141 Identities=17% Similarity=0.255 Sum_probs=107.1
Q ss_pred eeEEEecccCCC------CCCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Q 010272 172 KGVMFNKDVVAP------GKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPD 245 (514)
Q Consensus 172 ~Giv~~~~~~~~------~~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~~~~~~v~~i~~~~~~ 245 (514)
+|+.|+++|.+| ..|...++||+||+++.+ +++..++.+ +++.+.+.+.+
T Consensus 13 ~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkK-------------Is~i~~ilP-----------~LE~v~~~~rp 68 (201)
T 3osx_A 13 EGMQFDRGYLSPYFINKPESGSVELENPYILLVDKK-------------ISNIRELLP-----------VLEGVAKASKP 68 (201)
T ss_dssp CCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEE-------------ECCHHHHHH-----------HHHHHHTSSCC
T ss_pred cccEecCccCChheeecccCCEEEecCCeEEEEcCc-------------cCCHHHHHH-----------HHHHHHHhCCC
Confidence 599999998875 377788999999999988 456677777 56888899999
Q ss_pred EEEeCCCCCHHHHHHHHHc------CCeEE-----ecCChhHHHHHHHHhCCeecc-----CCCCCCCCccCCccceEEE
Q 010272 246 LVITEKGLSDLACHYLSKA------GVSAI-----RRLRKTDNNRIAKACGAVIVN-----RPDELQESDVGTGAGLFEV 309 (514)
Q Consensus 246 lVi~~~~i~~~al~~l~~~------~I~~v-----~~v~~~~l~~i~~~tGa~ii~-----~~~~l~~~~lG~~~~~v~~ 309 (514)
|+|++.+|+.+|+..|.-| ++.+| +.-++..|++||.+||+++++ ++++++..++|+ |+++.+
T Consensus 69 LlIIAEDvegEALatLvvNklrg~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~-a~~V~v 147 (201)
T 3osx_A 69 LVIIAEDVEGEALATLVVNNMRGIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQ-AKRVVI 147 (201)
T ss_dssp EEEEEEEECHHHHHHHHHHHHHTSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEE-EEEEEE
T ss_pred eEEEeccccchhhhHHHHhhccceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCC-ccEEEE
Confidence 9999999999999988776 23444 455578899999999999987 466777888998 876653
Q ss_pred EEECCeEEEEEEcCCCCCeeEEEE-ccCCHhHHHHHHHHHHHHHH
Q 010272 310 KKIGDEFFAFIVDCKDPKACTVLL-RGASKDLLNEVERNLQDAMS 353 (514)
Q Consensus 310 ~~ig~~~~~~l~~~~~~~~~TIll-~G~t~~~l~e~~~~i~dal~ 353 (514)
.+ .. |.++ ++.+...++.+...++.-+.
T Consensus 148 tk---------------d~-TtIv~G~G~~~~I~~Rv~qIr~qie 176 (201)
T 3osx_A 148 NK---------------DT-TTIIDGVGEEGAIAARVTQIRQQIE 176 (201)
T ss_dssp CS---------------SC-EEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred cC---------------Cc-eEEecCCCCHHHHHHHHHHHHHHHH
Confidence 22 22 4445 44566666666666555543
No 31
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=99.20 E-value=1.6e-11 Score=104.24 Aligned_cols=113 Identities=19% Similarity=0.267 Sum_probs=92.0
Q ss_pred eEEEecccCCC------CCCcccccCCeEEEEeccCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcE
Q 010272 173 GVMFNKDVVAP------GKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDL 246 (514)
Q Consensus 173 Giv~~~~~~~~------~~~~~~~~n~kIll~~~~L~~~~~~~~~~~~i~~~~~l~~~~~~E~~~~~~~v~~i~~~~~~l 246 (514)
||.|+|+|.+| ++|...++||+||+++.+ +++..++.+ +++++.+.+.+|
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkK-------------Is~i~~llP-----------~LE~v~~~~~pL 56 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKK-------------VSNVRELLP-----------ILEQVAQTGKPL 56 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSE-------------ECCHHHHHH-----------HHHHHHTTTCCE
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEeccc-------------ccCHHHHHH-----------HHHHHHHHCCCE
Confidence 88999998875 477888999999999988 556677777 568888999999
Q ss_pred EEeCCCCCHHHHHHHHHc------CCeEE-----ecCChhHHHHHHHHhCCeecc-----CCCCCCCCccCCccceEEEE
Q 010272 247 VITEKGLSDLACHYLSKA------GVSAI-----RRLRKTDNNRIAKACGAVIVN-----RPDELQESDVGTGAGLFEVK 310 (514)
Q Consensus 247 Vi~~~~i~~~al~~l~~~------~I~~v-----~~v~~~~l~~i~~~tGa~ii~-----~~~~l~~~~lG~~~~~v~~~ 310 (514)
+|++.+|+.+|+..|.-| ++.++ +.-++..|++||.+||+++++ ++++.+..++|+ |+++...
T Consensus 57 lIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~-a~~v~vt 135 (145)
T 1srv_A 57 LIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGR-AERVRIT 135 (145)
T ss_dssp EEEESEECHHHHHHHHHHHHTTSCCEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEE-EEEEEEC
T ss_pred EEEecccchhhhhhhhhhhhcccceEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCc-cCEEEEc
Confidence 999999999999998776 33344 455689999999999999997 355667778998 8776543
No 32
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=62.85 E-value=19 Score=30.00 Aligned_cols=52 Identities=17% Similarity=0.169 Sum_probs=39.5
Q ss_pred HHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCe
Q 010272 235 LCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 287 (514)
Q Consensus 235 ~v~~i~~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ 287 (514)
..+.|.+.++++|++. ++.+.+...|.++||.++.....+.-+.|.....++
T Consensus 68 ~a~~L~~~gv~vVI~g-~IG~~a~~~L~~~GI~v~~~~~g~i~eal~~~~~G~ 119 (136)
T 1o13_A 68 VPNFVKEKGAELVIVR-GIGRRAIAAFEAMGVKVIKGASGTVEEVVNQYLSGQ 119 (136)
T ss_dssp HHHHHHHTTCSEEECS-CCCHHHHHHHHHTTCEEECSCCSBHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CCCHHHHHHHHHCCCEEEecCCCCHHHHHHHHHhCC
Confidence 4456777899999995 799999999999999999866654444555554443
No 33
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=59.86 E-value=22 Score=28.73 Aligned_cols=52 Identities=21% Similarity=0.262 Sum_probs=39.5
Q ss_pred HHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCe
Q 010272 235 LCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 287 (514)
Q Consensus 235 ~v~~i~~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ 287 (514)
..+.|...++++|++. ++.+.+...|...||.++.....+.-+.|.....+.
T Consensus 55 ~~~~L~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~v~eal~~~~~g~ 106 (121)
T 2yx6_A 55 LPNFIKDHGAKIVLTY-GIGRRAIEYFNSLGISVVTGVYGRISDVIKAFIGGK 106 (121)
T ss_dssp HHHHHHHTTCCEEECS-BCCHHHHHHHHHTTCEEECSBCSBHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHcCC
Confidence 4566778899999996 699999999999999999865544444555554443
No 34
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=54.45 E-value=27 Score=28.17 Aligned_cols=51 Identities=16% Similarity=0.137 Sum_probs=38.2
Q ss_pred HHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCCh-hHHHHHHHHhCC
Q 010272 235 LCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRK-TDNNRIAKACGA 286 (514)
Q Consensus 235 ~v~~i~~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~-~~l~~i~~~tGa 286 (514)
..+.|...++++|+|. ++.+.+...|...||.++..... +.-+.|.....+
T Consensus 59 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~g~~i~eal~~~~~g 110 (120)
T 2wfb_A 59 AAQVLAKSGAGVLLTG-YVGPKAFQALQAAGIKVGQDLEGLTVRQAVQRFLDG 110 (120)
T ss_dssp HHHHHHHHTEEEEECS-CCCHHHHHHHHHTTCEEECCCTTSBHHHHHHHHHTT
T ss_pred HHHHHHHCCCCEEEEC-CCCHhHHHHHHHCCCEEEEcCCCCcHHHHHHHHHcC
Confidence 4456677899999996 69999999999999999986554 434445444443
No 35
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=53.53 E-value=33 Score=27.75 Aligned_cols=52 Identities=13% Similarity=0.053 Sum_probs=38.9
Q ss_pred HHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCe
Q 010272 235 LCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 287 (514)
Q Consensus 235 ~v~~i~~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ 287 (514)
..+.|...|+++|++. ++.+.+...|..+||.++.....+.-+.|.....+.
T Consensus 57 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 108 (124)
T 1eo1_A 57 TAQIIANNGVKAVIAS-SPGPNAFEVLNELGIKIYRATGTSVEENLKLFTEGN 108 (124)
T ss_dssp HHHHHHHTTCCEEEEC-CSSHHHHHHHHHHTCEEEECCSCCHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CcCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHHhCC
Confidence 3456678899999996 699999999999999999865544444455544443
No 36
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=47.88 E-value=36 Score=28.22 Aligned_cols=51 Identities=2% Similarity=0.036 Sum_probs=37.6
Q ss_pred HHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCe
Q 010272 235 LCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 287 (514)
Q Consensus 235 ~v~~i~~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ 287 (514)
..+.|...++++||+. ++.+.+...|.. ||.++.....+.-+.+.....+.
T Consensus 71 ~~~~L~~~gv~~VI~g-~iG~~a~~~L~~-GI~v~~~~~~~veeal~~~~~G~ 121 (136)
T 2re2_A 71 MLKSALDHGANALVLS-EIGSPGFNFIKN-KMDVYIVPEMPVADALKLILEGK 121 (136)
T ss_dssp HHHHHHHTTCSEEEES-CCBHHHHHHHTT-TSEEEECCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEC-CCCHhHHHHHHC-CCEEEEcCCCCHHHHHHHHHhCC
Confidence 4456677899999995 799999999999 99999876533334455444443
No 37
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=39.11 E-value=34 Score=27.27 Aligned_cols=51 Identities=18% Similarity=0.120 Sum_probs=38.2
Q ss_pred HHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCe
Q 010272 236 CMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 287 (514)
Q Consensus 236 v~~i~~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ 287 (514)
.+.|...|+++|++. ++.+.+...|..+||.++.....+.-+.|.....+.
T Consensus 55 ~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 105 (116)
T 1rdu_A 55 VQSLVSKGVEYLIAS-NVGRNAFETLKAAGVKVYRFEGGTVQEAIDAFSEGR 105 (116)
T ss_dssp HHHHHTTTCCEEECS-SCCSSCHHHHHTTTCEEECCCSCBHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHhCC
Confidence 355667899999996 589999999999999999866554444555554443
No 38
>2qtd_A Uncharacterized protein MJ0327; ribonuclease H-like motif fold, iron-molybdenum cofactor, ST genomics; HET: MSE PG4; 1.70A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 2kla_A
Probab=34.29 E-value=94 Score=24.07 Aligned_cols=48 Identities=17% Similarity=0.154 Sum_probs=35.7
Q ss_pred HHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCC
Q 010272 237 MQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGA 286 (514)
Q Consensus 237 ~~i~~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~i~~~tGa 286 (514)
+.+...++++|++ +++.+.+...|.+. |.++.....+--+.+.....+
T Consensus 50 ~~l~~~gv~~vi~-~~iG~~a~~~L~~~-I~v~~~~~~~v~eal~~~~~g 97 (105)
T 2qtd_A 50 KSIVKENVNAIIC-KNISEENYKKFSKK-IEIYHAEGDDVDKNISLFIEG 97 (105)
T ss_dssp HHHHHTCCSEEEE-SCCCHHHHHHHHTT-CEEEECCSSCHHHHHHHHHTT
T ss_pred HHHHHCCCCEEEE-CCCCHHHHHHHHhc-cEEEECCCCCHHHHHHHHHcC
Confidence 4456689999999 47999999999999 999986554444445544443
No 39
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=28.73 E-value=90 Score=29.58 Aligned_cols=50 Identities=20% Similarity=0.243 Sum_probs=38.3
Q ss_pred HHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeEEecC-C-------------------------hhHHHHHHHHhCC
Q 010272 237 MQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRL-R-------------------------KTDNNRIAKACGA 286 (514)
Q Consensus 237 ~~i~~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v-~-------------------------~~~l~~i~~~tGa 286 (514)
|.|+.++|+|||.....++...+.|.+.||.++--- . .+.++.++.++|.
T Consensus 78 E~i~~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~~~~~~~~~~~~~pt~~~~~~~~~~~~~~~i~~lg~~lg~ 153 (326)
T 3psh_A 78 ESLLALKPDVVFVTNYAPSEMIKQISDVNIPVVAISLRTGEVGEKGKLNPTLTDEDKAYNDGLKQGIELIAEVFEK 153 (326)
T ss_dssp HHHHHTCCSEEEEETTCCHHHHHHHHTTTCCEEEECSCCSCGGGTTCSSCCCTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHccCCCEEEEeCCCChHHHHHHHHcCCCEEEEeccccccccccccccccccccchhhhhHHHHHHHHHHHcCC
Confidence 678899999999876667778888999998766421 1 2567888888885
No 40
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=24.84 E-value=1.6e+02 Score=27.10 Aligned_cols=50 Identities=18% Similarity=0.300 Sum_probs=37.3
Q ss_pred HHHHHcCCcEEEeCCCC-CHHHHHHHHHcCCeEEec---CC----hhHHHHHHHHhCC
Q 010272 237 MQILKFKPDLVITEKGL-SDLACHYLSKAGVSAIRR---LR----KTDNNRIAKACGA 286 (514)
Q Consensus 237 ~~i~~~~~~lVi~~~~i-~~~al~~l~~~~I~~v~~---v~----~~~l~~i~~~tGa 286 (514)
|.|+.++|+|||..... ++...+.|.+.||.++-- -. .+.++.++.++|.
T Consensus 53 E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~~~g~ 110 (283)
T 2r79_A 53 EGVLALRPDILIGTEEMGPPPVLKQLEGAGVRVETLSAKPDLEALESNLKKLGDWLGV 110 (283)
T ss_dssp HHHHTTCCSEEEECTTCCCHHHHHHHHHTTCCEEECCCCSSHHHHHHHHHHHHHHHTC
T ss_pred HHHHhcCCCEEEEeCccCcHHHHHHHHHcCCcEEEecCCCCHHHHHHHHHHHHHHhCC
Confidence 67899999999997653 567778899999876642 12 2567788888885
No 41
>2pw9_A Putative formate dehydrogenase accessory protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Desulfotalea psychrophila LSV54} SCOP: c.97.1.5
Probab=24.80 E-value=70 Score=29.98 Aligned_cols=40 Identities=10% Similarity=0.251 Sum_probs=32.6
Q ss_pred HHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCCh
Q 010272 235 LCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRK 274 (514)
Q Consensus 235 ~v~~i~~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~~ 274 (514)
+++|.+..|++++++-..-+..+.++..+.||..++.++.
T Consensus 207 mV~Kaa~aGIpvlvS~SApTslAV~lA~~~giTLiGf~R~ 246 (268)
T 2pw9_A 207 MVLKCARIGIPIIMSRTSPSSLGLALAKRSGATLVAYSRP 246 (268)
T ss_dssp HHHHHHHHTCCEEEESSCBCHHHHHHHHHHTCEEEEEEET
T ss_pred HHHHHHHcCCCEEEEcccccHHHHHHHHHcCCEEEEEecC
Confidence 6678888888888888888888888888888888876653
No 42
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=24.66 E-value=1.7e+02 Score=22.55 Aligned_cols=51 Identities=12% Similarity=0.080 Sum_probs=36.4
Q ss_pred HHHHHHHHcCCcEEEeCCCCCHHHHH----HHHHcCCeEEecCChhHHHHHHHHhCCe
Q 010272 234 NLCMQILKFKPDLVITEKGLSDLACH----YLSKAGVSAIRRLRKTDNNRIAKACGAV 287 (514)
Q Consensus 234 ~~v~~i~~~~~~lVi~~~~i~~~al~----~l~~~~I~~v~~v~~~~l~~i~~~tGa~ 287 (514)
+..+.|.+-.+.+|+.+.+.++.... ++...+|.++...++.+ |..++|-.
T Consensus 26 ~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~~s~~e---LG~A~Gk~ 80 (101)
T 3v7q_A 26 LVIKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKVESRAV---LGRSIGKE 80 (101)
T ss_dssp HHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEESCHHH---HHHHTTSS
T ss_pred hhHHHHhcCceeEEEEeccccccchhhhcccccccCCCeeeechHHH---HHhhhCcc
Confidence 45556666778999999999985444 45677998888766665 56666643
No 43
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=23.65 E-value=73 Score=29.03 Aligned_cols=50 Identities=10% Similarity=0.129 Sum_probs=35.7
Q ss_pred HHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeEEe--cCC----hhHHHHHHHHhCC
Q 010272 237 MQILKFKPDLVITEKGLSDLACHYLSKAGVSAIR--RLR----KTDNNRIAKACGA 286 (514)
Q Consensus 237 ~~i~~~~~~lVi~~~~i~~~al~~l~~~~I~~v~--~v~----~~~l~~i~~~tGa 286 (514)
|.|+.++|+|||.....++...+.|.+.||.++- .-+ .+.++.++.++|.
T Consensus 54 E~i~~l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~~g~ 109 (260)
T 2q8p_A 54 EAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFDSLKGMQKSITQLGDQFNR 109 (260)
T ss_dssp HHHHHTCCSEEEEEGGGHHHHHHHHHHHTSCCEEECCSSHHHHHHHHHHHHHHTTC
T ss_pred HHHHhcCCCEEEecCccCHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 5788899999998765556677788888876443 212 2557778888885
No 44
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=23.33 E-value=1.5e+02 Score=26.77 Aligned_cols=50 Identities=20% Similarity=0.280 Sum_probs=37.6
Q ss_pred HHHHHcCCcEEEeCCCCC-HHHHHHHHHcCCeEEec---CC----hhHHHHHHHHhCC
Q 010272 237 MQILKFKPDLVITEKGLS-DLACHYLSKAGVSAIRR---LR----KTDNNRIAKACGA 286 (514)
Q Consensus 237 ~~i~~~~~~lVi~~~~i~-~~al~~l~~~~I~~v~~---v~----~~~l~~i~~~tGa 286 (514)
|.|+.++|+|||...... +...+.|.+.||.++.- -. .+.++.++.++|.
T Consensus 53 E~i~~l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~~~g~ 110 (255)
T 3md9_A 53 EGILAMKPTMLLVSELAQPSLVLTQIASSGVNVVTVPGQTTPESVAMKINAVATALHQ 110 (255)
T ss_dssp HHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCCSHHHHHHHHHHHHHHHTC
T ss_pred HHHHccCCCEEEEcCCcCchhHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 679999999999977654 56778899999876642 12 2557888888885
No 45
>2wi8_A Iron-uptake system-binding protein; bacillibactin and enterobactin binding, triscatecholate BIND protein, iron transport; 1.55A {Bacillus subtilis} PDB: 2why_A 2xuz_A* 2xv1_A* 2phz_A
Probab=23.16 E-value=1.4e+02 Score=27.95 Aligned_cols=50 Identities=22% Similarity=0.335 Sum_probs=37.4
Q ss_pred HHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCC----hhHHHHHHHHhCC
Q 010272 237 MQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLR----KTDNNRIAKACGA 286 (514)
Q Consensus 237 ~~i~~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~v~----~~~l~~i~~~tGa 286 (514)
|.|+.++|+|||.....++...+.|.+.+..++-... .+.++.+++++|.
T Consensus 90 E~I~~l~PDLIi~~~~~~~~~~~~L~~~gp~v~~~~~~~~~~~~i~~lg~~lg~ 143 (311)
T 2wi8_A 90 EKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISSNWKENMMLLAQLTGK 143 (311)
T ss_dssp HHHHHHCCSEEEEETTSCHHHHHHHHTTSCEEEECCCGGGHHHHHHHHHHHHTC
T ss_pred HHHHhCCCCEEEEcCccCHHHHHHHHhhCCEEEeeCCCcCHHHHHHHHHHHhCC
Confidence 5788899999998766778888889888865544322 2557788888885
No 46
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=22.77 E-value=1.1e+02 Score=27.59 Aligned_cols=34 Identities=29% Similarity=0.504 Sum_probs=27.1
Q ss_pred HHHHHcCCcEEEeCC-CCCHHHHHHHHHcCCeEEe
Q 010272 237 MQILKFKPDLVITEK-GLSDLACHYLSKAGVSAIR 270 (514)
Q Consensus 237 ~~i~~~~~~lVi~~~-~i~~~al~~l~~~~I~~v~ 270 (514)
|.|+.++|+|||... ..++...+.|.+.||.++-
T Consensus 51 E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~ 85 (245)
T 1n2z_A 51 ERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMW 85 (245)
T ss_dssp HHHHHTCCSEEEECTTTSCHHHHHHHHHHTCCEEE
T ss_pred HHHhccCCCEEEEeCCCCcHHHHHHHHHCCCcEEE
Confidence 678899999999863 4667778889999987664
No 47
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=21.97 E-value=2.7e+02 Score=21.52 Aligned_cols=51 Identities=20% Similarity=0.225 Sum_probs=36.2
Q ss_pred HHHHHHHHHcCCcEEEeCCCCCHHHHH----HHHHcCCeEEe-cCChhHHHHHHHHhCC
Q 010272 233 ENLCMQILKFKPDLVITEKGLSDLACH----YLSKAGVSAIR-RLRKTDNNRIAKACGA 286 (514)
Q Consensus 233 ~~~v~~i~~~~~~lVi~~~~i~~~al~----~l~~~~I~~v~-~v~~~~l~~i~~~tGa 286 (514)
++.++.|.+-.+.+|+.+.+.++.... ++..++|.++. .-++.+ |..++|-
T Consensus 28 ~~v~kai~~gkaklViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~e---LG~a~Gk 83 (104)
T 4a18_G 28 KSTIKAIRNGTAKLVFISNNCPTVRKSEIEYYASLAQISIHHFVGSNVE---LGTACGK 83 (104)
T ss_dssp HHHHHHHHHTCCCEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHH---HHHHTTC
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEecCCHHH---HHHHhCC
Confidence 456666777789999999999984443 45567999886 555655 5666664
No 48
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=21.96 E-value=1.9e+02 Score=22.28 Aligned_cols=50 Identities=10% Similarity=0.005 Sum_probs=35.4
Q ss_pred HHHHHHHHcCCcEEEeCCCCCHHHHH----HHHHcCCeEEecCChhHHHHHHHHhCC
Q 010272 234 NLCMQILKFKPDLVITEKGLSDLACH----YLSKAGVSAIRRLRKTDNNRIAKACGA 286 (514)
Q Consensus 234 ~~v~~i~~~~~~lVi~~~~i~~~al~----~l~~~~I~~v~~v~~~~l~~i~~~tGa 286 (514)
+..+.|.+-.+.+|+.+.+.++.... ++..++|.++..-++.+ |..++|-
T Consensus 25 ~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~s~~e---LG~a~Gk 78 (101)
T 3on1_A 25 QVVKAVQNGQVTLVILSSDAGIHTKKKLLDKCGSYQIPVKVVGNRQM---LGRAIGK 78 (101)
T ss_dssp HHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCHHH---HHHHTTS
T ss_pred HHHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCHHH---HHHHhCC
Confidence 45556666778999999999975544 34667998887666655 5566664
No 49
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=21.57 E-value=2.6e+02 Score=22.36 Aligned_cols=49 Identities=16% Similarity=0.063 Sum_probs=35.7
Q ss_pred HHHHHHHHcCCcEEEeCCCCCHH-----HHHHHHHcCCeEEecCChhHHHHHHHHhC
Q 010272 234 NLCMQILKFKPDLVITEKGLSDL-----ACHYLSKAGVSAIRRLRKTDNNRIAKACG 285 (514)
Q Consensus 234 ~~v~~i~~~~~~lVi~~~~i~~~-----al~~l~~~~I~~v~~v~~~~l~~i~~~tG 285 (514)
+.+..|.+-.+.+|+.+.++++. ...++.++||..+.--++.+ |..++|
T Consensus 27 ~v~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~sk~e---LG~a~g 80 (121)
T 2lbw_A 27 EVVKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIPSKQD---LGAAGA 80 (121)
T ss_dssp HHHHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECCCHHH---HHHHHT
T ss_pred HHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEECCHHH---HHHHhC
Confidence 45566667789999999999883 44567788998876666655 455566
No 50
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=21.54 E-value=22 Score=35.84 Aligned_cols=18 Identities=11% Similarity=0.215 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHhchh
Q 010272 460 AQTFKTAIEAACMLLRID 477 (514)
Q Consensus 460 ~~~l~~A~e~a~~iL~id 477 (514)
..++..+.+-+..++.-+
T Consensus 358 eeal~~~~~~~~~i~~~~ 375 (449)
T 3iot_A 358 DAALAAAQTNAAAMATLE 375 (449)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhH
Confidence 345666666666555433
No 51
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=20.91 E-value=1.6e+02 Score=26.58 Aligned_cols=50 Identities=22% Similarity=0.264 Sum_probs=36.5
Q ss_pred HHHHHcCCcEEEeCCC-CCHHHHHHHHHcCCeEEec--C--Ch----hHHHHHHHHhCC
Q 010272 237 MQILKFKPDLVITEKG-LSDLACHYLSKAGVSAIRR--L--RK----TDNNRIAKACGA 286 (514)
Q Consensus 237 ~~i~~~~~~lVi~~~~-i~~~al~~l~~~~I~~v~~--v--~~----~~l~~i~~~tGa 286 (514)
|.|+.++|+|||.... .+....+.|.+.||.++-- . .. +.++.++.++|.
T Consensus 53 E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~~i~~lg~~~g~ 111 (256)
T 2r7a_A 53 EGILSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLPRVPATLEQMYANIRQLAKTLQV 111 (256)
T ss_dssp HHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCSCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHccCCCEEEEcCCCCCHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHHhCC
Confidence 6789999999998654 4677788899999865532 1 22 357778888875
No 52
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=20.70 E-value=1.2e+02 Score=29.05 Aligned_cols=50 Identities=12% Similarity=0.137 Sum_probs=32.9
Q ss_pred HHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeEEec-C--------C--hhHHHHHHHHhCC
Q 010272 237 MQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRR-L--------R--KTDNNRIAKACGA 286 (514)
Q Consensus 237 ~~i~~~~~~lVi~~~~i~~~al~~l~~~~I~~v~~-v--------~--~~~l~~i~~~tGa 286 (514)
|.|+.++|+|||....-.+.+.+++...||.++-- . . .+.++.++.++|.
T Consensus 90 E~Ilal~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~~~~~~~~~~~~~~~i~~lG~~lG~ 150 (346)
T 2etv_A 90 ESLITLQPDVVFITYVDRXTAXDIQEXTGIPVVVLSYGNLGTFEDEDLFRSIELAGXILGR 150 (346)
T ss_dssp HHHHHHCCSEEEEESCCHHHHHHHHHHHTSCEEEECCCCTTCSCCHHHHHHHHHHHHHHTC
T ss_pred HHHhcCCCCEEEEeCCccchHHHHHHhcCCcEEEEecCccCcccHHHHHHHHHHHHHHcCC
Confidence 57888899999986543345566677778765532 1 1 2456677777775
No 53
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=20.68 E-value=22 Score=35.85 Aligned_cols=8 Identities=38% Similarity=0.970 Sum_probs=3.6
Q ss_pred eEEEeccc
Q 010272 173 GVMFNKDV 180 (514)
Q Consensus 173 Giv~~~~~ 180 (514)
|+.+++.+
T Consensus 114 ~l~YNkdl 121 (449)
T 3iot_A 114 SLIYNKDL 121 (449)
T ss_dssp EEEEETTT
T ss_pred EEEEehHH
Confidence 44444443
No 54
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=20.07 E-value=1.5e+02 Score=23.82 Aligned_cols=37 Identities=27% Similarity=0.327 Sum_probs=27.6
Q ss_pred HHHHHHHcCCcEEEeCCCC-CHHHHHHHHHcCCeEEec
Q 010272 235 LCMQILKFKPDLVITEKGL-SDLACHYLSKAGVSAIRR 271 (514)
Q Consensus 235 ~v~~i~~~~~~lVi~~~~i-~~~al~~l~~~~I~~v~~ 271 (514)
.++.+.+.|+..|+.+.++ ++++.+++.++||.++++
T Consensus 74 ~v~e~~~~g~k~v~~~~G~~~~e~~~~a~~~Girvv~n 111 (122)
T 3ff4_A 74 EYNYILSLKPKRVIFNPGTENEELEEILSENGIEPVIG 111 (122)
T ss_dssp GHHHHHHHCCSEEEECTTCCCHHHHHHHHHTTCEEEES
T ss_pred HHHHHHhcCCCEEEECCCCChHHHHHHHHHcCCeEECC
Confidence 5667777787666666554 678888899999988864
Done!